>gi|260685376|ref|YP_003216509.1| anti-sigma-B factor (serine-protein kinase) [Clostridium difficile R20291]
MACETIKMEITTNPDYVSIIRLTASGIANKMGFPIDDIEDIKVAVSEACTNAIKHSKDDVFNIVFNILDN
AINIEIQDNGKGYDVSSISTPDLENPKESGLGLFIIKTLMDDVDIESEHNQGTKIKMTKYLGVDI
>gi|260685377|ref|YP_003216510.1| RNA polymerase sigma-B factor [Clostridium difficile R20291]
MKNVANATHYLNMDTKELFNLYNKNKNVDIRNILIERHLYLARLLAKKYINKGVDFEDIYQVASLALIYA
IDRYDVEKGFEFSSFATPTIVGEIKKYFRDKVWTLRVPRRIQELSKKISDAKIKLEQENKKHPKVKDIAD
YIGVSEEDVLEAMEASYGYQPMSLDSSSNDDSEDKDITLIDKIGKEEGNFGSIEYEDFINKFIETLNELE
VKIFKDRFFFDKTQSSIAKELGISQMTVSRLEKKVVEKLKKEYEKNL
>gi|260685378|ref|YP_003216511.1| putative small-molecule-binding protein [Clostridium difficile R20291]
MNSDERRSKLIDILKESKCPVKGGMLAEILNVSRQVIVQDIALIRARGFEIIATPQGYIIYNQPYFTKQI
KCKNHRNSKEIYDELKIIVDLGGIVKDVIVNHPTYGQITAELNIHSKMDIDNFMKKVETNEFKQLSVLTE
CSHIHTIETLKEETIEVITKELEDRGILS
>gi|260685379|ref|YP_003216512.1| putative mechanosensitive ion channel protein [Clostridium difficile R20291]
MNFLSLAKAASTNSNITKRTLENMLNNFSDNIPNIIYAIIVFVIGIYISKIVRKMVSRFLIKYGMSKGVN
NFIVYGIYISMLSIISLISLGVIGIQTTSVVAVLGAAGFSIGLAFKEILSNLGSGMIILFFKPFNIGDYI
QGSGVEGTVSDIQIFSTVLKTPDNKTIIIPNFQLTSNNIINYTHQNKRRIDFSYNISYDSDIDVVKSILN
EIFINEKRILDDPKPIIGLNSIGNNTMQIVARPWVKTDDYWDVYFDVMEKVKNKFDENNIKVPFVPSSLL
FNNMSNSNTMDKR
>gi|260685380|ref|YP_003216513.1| seryl-tRNA synthetase [Clostridium difficile R20291]
MLDIKRIRENLDDIKKAMERRGEREFDLDAVVELDNKRREILQEVEVMKNELNVNSKKIPQLIKEGKDVT
EEKTRLKELSDKIKGIDEKVKEVEAKMEYTLMRIPNVPHPEVPQGETDEDNVQIRTWGEPTKFDFEYKAH
WDIGTGLGILDFERAGKITGSRFTLYRGLGARLERSLMNFFLNTHTAKHGYTEVLPPFMANRNSFIGTGQ
LPKFEEDMFKIEGLEYFLIPTAEVPVTNIHANEILDVAELPIKYCAYTPCFRSEAGSAGRDTRGLVRQHQ
FNKVELVKFVKPEDSYNELESLTHDAETMLQMLGLPYRVVKICTGDLGFTAAFKYDLEVWMPSYNRYVEI
SSCSNFEDFQARRAGIRFKRDKKSKAEYVHTLNGSGLAIGRCLAAILENYQQADGSVVVPEELRPYMGVD
VIK
>gi|260685381|ref|YP_003216514.1| putative cytosine/adenosine deaminase [Clostridium difficile R20291]
MESSFYMKEALKEAYKAYNKKETPIGAIIVKDNQIIARAHNLTETLKDSTAHAEILAIKQASEKLGGWRL
TDCDLYVTMEPCIMCSGAIVNSRIKKLIIGTRHVKNSYIEKQHEFKLDYFNNNNVKVAFDVLQEECSIIL
QEFFKALRKRD
>gi|260685382|ref|YP_003216515.1| DNA polymerase III subunit gamma/tau [Clostridium difficile R20291]
MHKALYRAYRPQKFEDVIGQDHIIKTLKNQIYSDNIGHAYLFCGTRGTGKTSTAKIFSRAVNCLNKINEE
PCNECEICESVLKDNTMDVVEIDAASNNSVDDIRELRESVKYSPANAKYKVYIIDEVHMLSQGAFNALLK
TLEEPPSYVIFILATTEPHKIPATILSRCQRYDFKRVTVKDMTLRMKKICEDEGIDIDDKALNLIARNSQ
GALRDALSILDQCMSFGESKIDYKDVVELMGSVNIEQLFELSQCIVEQDTKKSLEILNEFVLWGKDIRNL
INDLIDHFRNLMVCKVSSELDEIISLPEETIEQLKIQSKNIDINDLIRILNILSITQDDIKSSSNPRVLV
EITIMKIAQPMFDESKEALIKRVENLEKMIELGNFKSEKIGNNKEKEYEVDREIDVKQENVVYEDVKNED
VILIESSWKNILKQIKKDKKMPIYALLSEVKSFNVYSNMLYVIFDDKFDFAKTRLSSQDTINYLEKTIRD
VLNRSFNVKIVLTSEVKDINLEVKEKKDIGEEILKNIVSEEILEIKYSIDENESK
>gi|260685383|ref|YP_003216516.1| hypothetical protein CDR20291_0006 [Clostridium difficile R20291]
MAKKGFGGGMMPGGGNMNNLLKQAQKMQENMQKAQQELESKEVEASVGGGAVTVKVNGKKEVIDITIKPE
VVDPDDIEMLQDLVLSAVNQALRNIDDIQASQMSKVTGGMNIPGLF
>gi|260685384|ref|YP_003216517.1| recombination protein [Clostridium difficile R20291]
MQVYTGPITRLIEEFSKLPGVGRKTAQRLAFHIINMNTNDVEALSKAIIDAKREIRYCSICCNITDTDPC
SMCSNKSRDSSVICVVEDPRDVAAMERTREFKGQYHVLNGVISPMDGIGPDMLKIKELIQRLGNQEVKEI
IMATNPTIEGEATAMYIARLVKPMGIKVTRIAHGLPVGGDLEYADEVTISKALEGRREI
>gi|260685385|ref|YP_003216518.1| putative glycosyl transferase [Clostridium difficile R20291]
MSKKVLIMSASTGGGHNRAALAIKEELTSKTLDGEPIECEIIDSLKLVNNTMDKIISRGYEKSAIYTPKA
YGSVYRLSETNLLSKNEFKDNLLITFMAKKFKKLIRSEKPDLIIGTHPFPMIALSTLKKNFNLHNNESNA
YTEHFYKHYTNTINVPPLISVLTDYTTHSTWIQNEIDYYIVGHEYVKELLVFDGVGPSKIRTFGIPVEKS
FLSHRDKDIVLSELNLSPDKLTVLLMGGSFGAGNIKETLDELLDTDRDFQILVITGKNESLKEKIEKKLM
SRYHDKNVCVLGYTDKMNDILASIDVLVSKPGGLTTTEALLKDVPMIVPYYIPGQEEENLDFLSNCGAAL
RTTKKYNLSILLKVLIDDPSRLEMLKRNVKSIRKSNSAQNIANLILNIISG
>gi|260685386|ref|YP_003216519.1| hypothetical protein CDR20291_0009 [Clostridium difficile R20291]
MYIVIGNEIVDSEELKIIIDENSKFKVEKDLSKSTKREDVIAYQLSIDLNYLDSLINEQCNLSSLSDEEK
FDEYMTLSDELALDLEELMPKYTIINARAYKLDEVDGIVKIILAVAYADLGHLKLSDVVKRLSRQVD
>gi|260685387|ref|YP_003216520.1| pyruvate carboxylase [Clostridium difficile R20291]
MLKKFNKILVANRGEIAIRIFRACSELGIKSVGIYSKEDKYGLFRTKADESYLIGEGKGPIDAYLDMDGI
IDLAKRKKVDAIHPGYGFLAENAEFARKCEENGITFIGPSSKVMNMMGDKINSKKIAKEVNVQTIPGVEK
AIRSTEEAKEVANKIGYPVMIKASNGGGGRGMRIVHREEDLELEYETACSESRKAFGEDIIFIEKYIADP
KHIEVQILGDNYGNIVHLYERDCSVQRRHQKIIEYAPAFSLDDKVRKEICEDAVKLSKHVGYSNAGTLEF
LVDANGGHYFIEMNTRVQVEHTVTEMVTGIDIVQSQILIAQGYSLDSEEINIKSQDDVEIRGYSIQCRIT
TEDPKNKFMPDTGKIQVYRTGSGFGIRLDGGNGFTGANISPHYDSLLVKTISWDRTFQGAINKTIRSIKE
LRVRGVKTNVGFLVNVLNNPIFSNGKCSTKFIDENPDLFEITESKDRGTKLLQFIGDVIVNDNACKEKPL
FDALHDPRMDKDGSKSEGSKILFDKLGKSAYIEKIKNDKKLLLTDTTMRDAHQSLLATRIRTYDLLKAAK
PTEKYQKDLFSLEMWGGATYDVAYRFLKESPWRRLQKLREEIPSIMFQMLLRASNGVGYKNYPDNVIEEF
TKESARQGIDVFRIFDSLNWVENMKPSINTALETGKIVEATMCYTGDILDKTKTKYNLEYYIKMAQELES
LGADIIAIKDMSGLLKPYSAYTLVKELKKNVKAPIHLHTHDTSGNGVATCLMASEAGVDIIDAALESMAG
LTSQPSLNAIVEALKNTERDTGIDLFGYDELGKYYKDLRKVYNKFESDLTNSCAEIYNFEIPGGQYTNLK
PQADSLGLVNRFDEVKEKYKEANEVVGDIIKVTPSSKVVGDLAIFMTKNKLDKDNIIEEGKNLSFPDSVV
DYCKGMIGQPEGGIPKDLQEVVLKGEEAITVRPGSLLPAEDFDEIAKYLNEKYDINANIRNVISYALYPK
VYEDYIKHLQHYNDISKLESDVFFYGLNKNEECEVEIEEGKVLTIRLVEIGEVKENGFRTIGFELNGMVR
EVEIKDKNFSGKINNVEKADMNDPLQIGASIPGKVIKIMVKEEDEVKANQPLIVIEAMKMETIIVAKTDG
VIKSIKVKEDDMVEDKQLLMIMK
>gi|260685388|ref|YP_003216521.1| putative translation elongation factor [Clostridium difficile R20291]
MKVYDSKMLRNVAVLGHSGCGKTNLIETIAYTANTNKIPKLTDKVNMTYSMGLIPIEYNDYKFNLLDTPG
YFDFSGDVVSSLRASDAAIIVIDATAPIQVGTEKSLELTESIPKIMFINKIDNEKARYKDAIAMLREKYN
NKIVPMISPIYKDKNFVKLHNVFENIDDLEGEFKEQAMSVKEALMELIAETDDQILDKYFNGEELTTEEI
QKGIIIGIQRGDIIPVICGSTINNIGTKEILDTISSYLEPIFTEESKPFRGLVFKTMVDPFVGKMSYIKI
TEGVLSKDKDVFNINKNVKEKIANIYTLRNSELVEIEKAKAGDIVVITKVNSLKTGDTISADKDAEALEK
IDFPKPQIYYAVTPKNKGDEEKVASVLNKLVEEDPTLHWYRNTETKQALLGGQGELHIKTIKNKMKDKFG
VDVELNDLKVPYRETIKGTADVQGKHKKQSGGHGQYGDVKIRFERCESDFEFTEEIFGGSVPKQYIPAVE
KGLKDSMQKGILAGYPVTNIKATLYDGSYHDVDSSEMAFKMAASAAFKKGMEEAHPILLEPIMKLKITVP
EEYMGDVMGDINKRRGKIFGMEPDDKGKQIIFAEAPQAETFKYAIDLRAMTQGRGYFEMELERYGEVPSQ
FAEKIIGLATAK
>gi|260685389|ref|YP_003216522.1| transcriptional regulator [Clostridium difficile R20291]
MATMTDIIEKFIKDLMEEDNSIQIQRNELANLFSCAPSQINYVLTTRFTIDRGYYIESKKGGGGYVQIEK
IRKSKDGHIRELLNEKIGSQISYKKAKELLEGLKESDLINERELKLILYAIDDKSLCMPIYELKEKVRSN
ILKNIIIGLFSIEE
>gi|260685390|ref|YP_003216523.1| putative DNA repair protein [Clostridium difficile R20291]
MLCQKCNKNKASVYYNKIVNGEKTEMYLCSECAKENTEMNFNLDMPFSMMDIFSNLGFQPKKELEEKLVC
PKCNTTYSEFKNNGRFGCSECYNAFSSQVNPMLQNIHGHIEHTGKAPKKSFYKISVENEIKELKEDLDRA
IKNEEYELAAQFRDKIKYLKGSID
>gi|260685391|ref|YP_003216524.1| putative ATP:guanido phosphotransferase [Clostridium difficile R20291]
MKENIVMKSRVRLARNLNNYPFPNKLDKECAMEIIEKVKNAFINSNLEQKEEFDFYKIEDLDQSKKMLMV
EEHIISPDLAENDKSAVIVKKDKTISIMINEEDHIRIQTICDDLNLEYAYSVANEIDDLLESSLEYAFNT
KLGYLTSCPTNTGTGMRASVMMHLPALSQLGYMDELYKISSQIGIAIRGIYGERTEALGNIYQISNQLTL
GRTESNIIENVSGLTKDAISKEIKAREILQKKLGIKLEDKIFRSIGTLENSRVMSSAEAMSHLSNIKMGI
EMNYIDKLDLRAIEQLMIGIQPAHQSIMYKSDDVENRDINRATYIRETLEKLRGGMNCELQ
>gi|260685392|ref|YP_003216525.1| ATP-dependent Clp protease [Clostridium difficile R20291]
MEGKGEEISEDIVLSPRSKQILELSGMFANKLKTNYIGTEHILLAIIQEGEGIANKILNYAGVNDRTLAQ
LTIDMMGISDKNQYKAENSYTGNQNQAESKVLDKYGRNLTLYAKQNKIDPVIGREKEIQRVIQILSRRTK
NNPVLIGDPGVGKTAIAEGLATNIALGNVPETLKNKTLYSLEMGSLLAGAKYRGEFEERIKEVVDEVVKN
GNIILFIDEMHTIIGAGSTGEGSIDASNILKPALARGEIQVIGATTIDEYRKHVEKDSALERRFQPVMVD
EPTKEDSIKILEGLRDKYEAHHKVKITDDAIKAAVELSTRYISDRYLPDKAIDLIDEAASKVRLKENTPP
SEIKKLELEIENIDKEKEEAVRCQDFEKAAKIRDEQGLLKKQLEDVRERWNKSSKHSDLVDGEVIAEVVG
LWTGIPVNKILEEEADRLLRLEEILHNRVIGQEQAVKSISKAIRRSRAGLKDPNRPIGSFLFLGPTGVGK
TELSKALAEVQFGDENQIIRIDMSEYMEKHAVSRMIGSPPGYVGHDEGGQLTEKVRRNPYSVILFDEIEK
AHPDVFNILLQILDDGRLTDSKGRTVDFKNTIVIMTSNVGASTIGRQKTLGFSIAKGDEEEKSQYEKMKE
NIMGELKQRFRPEFLNRIDDIIVFHSLNENHISKIVLLMAAKLQERLKEMDIKLEMSDEAVKLISKSGFD
LEYGARPLKRALQKELEDELSEAILKGNVKKGSNVVAKVKDEKIVFETK
>gi|260685393|ref|YP_003216526.1| DNA repair protein [Clostridium difficile R20291]
MAKIKTKYVCQSCGYETAKWLGKCPECTKWNTFVEEIDQKSTKKEVFIIDKSSSKPVSINSIESKEEERF
TTDINELDRVLGGGIVKGSLVLVGGDPGIGKSTLLIQVSSNVANLGKTVLYITGEESESQIKMRAKRLGI
NSENLYIFAENNLSIIESYLESVNPELIILDSIQTVFSPEISSAPGTVSQIKEGTSKFMKISKKMGISTF
IVGHVTKEGSLAGPKLLEHMVDTVLYFEGERYNTYRLVRAVKNRFGSTNELGVFEMRDLGLVELDNPSKI
LISEKPKDVAGSVIISTVEGTRPMLLELQALVSPTSFGIPKRTSTGVDYNRVGMLLAVLEKRVGLQIQNQ
DVYINIVGGIKINEPSIDLGIAISVASSFRNIPIDENIAVTGEVGLTGEVRAVSFIEKRIAECKKLGFKK
IVVPRSNYDVVKETKGIEIWPVDNLRQAINIVLGRNQ
>gi|260685394|ref|YP_003216527.1| putative DNA-binding protein [Clostridium difficile R20291]
MENFLDNKNMLYALKMISPGTPLRLGLNNVLRAKTGGLIVIATNEDVMKIVDGGFAINAEYSPSYLYELA
KMDGAIVLSGDVKKILFANAQLIPDYFIETSETGTRHRTAERVAKQTGAIVIGISQRRNVITVYRGNEKY
VVEDISKIFTKANQAIQTLEKYKTVLDQAVTNLNALEFNDLVTIYDVALVMQKMEMVMRVTSIIEKYVIE
LGDEGTLVSMQLEELMGTTRIDQKLIFKDYNKENTEIKELMKKVKNLNSEELIELVNMAKLLGYSGFSES
MDMPIKTRGYRILSKIHRLPTAIIENLVNYFENFQQILDASIEELDEVEGIGEIRATYIKNGLIKMKQLV
LLDRHI
>gi|260685395|ref|YP_003216528.1| hypothetical protein CDR20291_0018 [Clostridium difficile R20291]
MIRKVTRILFILLGFTIGITTYLTLMKDFEILTFGKETYGYIAAVVAGIIIAILGYLIEPWVVNKVKEIA
KIVDKELSKYPQTDILLGSMGLIVGFVIAYLLSGLVNRIPIVGGILSLLLYLFLGYLGMKVALKSKNDLF
NIGKLGRLANPIKDKDKDKENKKEVKAIPPKVLDTSVIIDGRIADICKTGFIEGKLIIPAFVLEELRHIA
DSSDDLKRVRGRRGLDILNIIQKELNIEVEISERDFDDIAEVDSKLLKLAQVLNGKVVTNDYNLNKVAQF
QGVEVLNINELANAIKPVAIPGEDMVVQVVKEGKEAQQGVAYLDDGTMIVVDGGRKYMNETIKVLVTSVL
QTPAGRMIFAKPKN
>gi|260685396|ref|YP_003216529.1| hypothetical protein CDR20291_0019 [Clostridium difficile R20291]
MRKKIISFLATFIIILTSASQYSFADDMSTRGKVIFIDMNRTSMSNMLRIKSLREELDNRGYIGLMNIRG
DKGSDDRRSYASMGAGGRANVANEEDINFESSSKDRNIVFESATGKSAKGINNLTINKSINENLNFGEYG
SVLGSLGQSLSENGLKASVLGNSDIIENGQLIKNRNLCLTAMDEYGRIPNGNVDTINKKDLSMPYGISTD
YDKLIVETKEAYKNNDVVFVELGDTYRLDLYKPNLNEKTYESVKDNIEKNIDVYLKNIFSMVEENDTVYI
ASAFPSDLDYKNKRRLSPIIKLNGEGKGILSSSTTRREGIVTNLDVGVEILDNFNIKNQNMVGRKYELIN
RDDNKEFLMDEYQKIVSISSIRSTILNGFVSIVFLSWIVAMIAILFRKHISKNYKETTFFILKELLKIGI
VMPLSFMITPIMNFKTPLAISLGIIIITLTIYLISKVLIKNDLKNMLFFTGLTIVIMVIDAGFGSYLMKS
NVMSYDCIIGARYYGVGNEYQGVAIGSAIFTFAILLTYKNIPKWSIIVFSLVILITSASPIMGANVGSAI
SECVAFLLFILLIYNVKIDFKKIVLLGIAVLFVLGVFVAIDMILGSNSHLGMFVKEIYFNGPGEIIQTFS
RKIEMNLKLAQTSAWVNILLTGIGVILVLMINQIRYFKQLMDEYPIVFKGFIASIAGCLVTLLVNDSGIV
SSATAFIYVIVPMITLSINLTALKE
>gi|260685397|ref|YP_003216530.1| AraC-family transcriptional regulator [Clostridium difficile R20291]
MNRNNFSHEIIEPIDNLDVNFKLFDDSGSYVANHWHNSLEIIYITSGDLQINMEGYTYNLKANECMFINS
GIIHSTRCTYQDTSILLQVPLSFLNKYIPDFKNCYFDFKVNANDNNYKKNSGKVKLILENMREIKLSSPP
AANLLFTSLLFELLFELYTNFKISVGNKNMKKTVLDLSKFEPVLEYTKINYKMPISINKIAKVAHLQPEY
FCRKFKQYMGQTYLEYLNDVRISHIYKDLINTNDTLCSILEAHGFTNTKLFYRIFKEKFKCTPKHIRKKS
T
>gi|260685398|ref|YP_003216531.1| putative beta-glucosidase [Clostridium difficile R20291]
MYIKGVNLGGWLVLEKWMTSSLFEGTEAEDEYYLPRQLSREAYESRIKTHRSEYITERDFATIKSMGFNS
VRIPVPYFIFGDCEPFIGCVKELDKAFAWADKYGLSILIDLHTVPGSQNGFDNGGISGICSWSQNPEYVA
FTLNVLERLAKRYGMRHELYGIQILNEPITERMWNIMNVPNRFKAVDKEMARGSKPNSLEFLRDFYIKAY
KVMRPYMREENVIVFHDAFELKAWKDFMREEEFKNIVLDTHQYLMLAESDGCEQSIDSYLKYIRENYAKD
ILQMQKYFPVICGEWSLFNSYACGIDTNGGQSPLNGIESNIDKLSKDDKRELYRKIAKAQLDAWRNGSGH
YYWNYKLLLDTVNEEGWIGWDSWDLGKCVAQEWYPIEY
>gi|260685399|ref|YP_003216532.1| putative beta-xylosidase [Clostridium difficile R20291]
MIKNPILPGFNPDPCICRKGDDYYLVVSSFEWFPGIPVYHSKDLKNWELYTHILTDETKIDLKKLPSSKG
IWAPCLTYCEEEDLFYIVYGIMNSMNARYFDVDNYLITSKDIKGEWSEPVYIHSSGFDASILHDDDGKKW
IASLDWETREGYEKPGVICLVEYCTKKKEIVGYPKRIWSGGTDRGCIEAPHITKRGDYYYIMCAEGGTGY
GHSVTMGRAKNIWRPYEKDSMNPIVTSIPGDFYERHDPDHLKPKYYNPESKLQKSGHGSYIETTSGEVYL
VHLTSRPFVPELRCTLGRETAIQKMKWTKDNWLRMEDESNLAKEYVSESKLEEHLVSSIPSFDDFDSNVL
GLQYYAPRISPLSFADVKSRPGYVRIRGQESRTSLNKVSILARKLTSVYARITTKMEFYPEVHQHSAGLI
MYYDNMNYINLRKYYSETLGQSALSIIHLENGEKTEFLNTRIPIKDIPIYLRLYIQGRKSYFEWSYDEKN
YQRIGKVFDTTKFSDEYCKYGEFTGTFIGLTCADRVKHKHYADFDFFEYIADESKDVD
>gi|260685400|ref|YP_003216533.1| putative xylose transporter [Clostridium difficile R20291]
MNTEVNVKATTIRYEKISFFERISYGCGDLGCNIIYSAMSAFLLFYYTNYADVSAAAVGSIMLVSRILDG
FSDLTMGIIVDRTKSKYGKARPWILRMAIPFAIAAVLLFSVPSNLGITSKLIYIFITYNLVSTVIYTAIN
VPYATLNSLITQNQYERGVLSIFRMILATCGTLLINGLTLPLVEYFGNNLSAWTKTFFVFGIASIMVFFI
TFTGTKERVKAVKQDRNEVIPFKIGIKSLFRNKYWIQITLCLVCIFIVFAINGGSSVYYAKFILGDEKLF
GPINMVSNISQIIAMFMVAPFIKKFGKRNVLIVGSIILISSNVMFIIVGQNYIGVIFASAIKGIGSAGIA
STMFAIVSDTIEYGEWKTGYRTEGLINSASSFGFKVGNGLGSAILGAVLSIGGYVGTSATQSDLAIVSIK
VCFIYLPIFITILQIIIMFFYKLDKEYSTILNELNTK
>gi|260685401|ref|YP_003216534.1| transcriptional regulator [Clostridium difficile R20291]
MKKIGDLRLMMKCCSLYYEDNLNQQEIANQLGISRPTISRILKEAFEQGIVKIQIVDVLKNDYQKIERSL
ERKYKLKEVIVVDDKQDALTQKQELARAVSEYLTRVVKENDIIGVSIGTTLKEIPRYVEKSNCKNVTFIP
LLGGIGDNEIDIHANQIAVSLARAFGGDFKLLHAPAVMSDLSTKEKLCKDEKIKEVLDLIDKTTIAIVGI
GNPMSLNSTIMASGYMNEADIEDLKKYNSIGAICLQAFDKEGKTSILEFNQRVLGVKLEDLKKIKRTIGV
ASGDEKIEAIKASLKAKFINSLAINHSLALKLLEDCD
>gi|260685402|ref|YP_003216535.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase alpha subunit [Clostridium difficile R20291]
MYMSISKETLLEMYKRMNQARKFEEKVSWFFARGMVHGTTHLSVGQEASSVAAVMALEKGDLVSLTHRGH
SQFIGMGIDLNKMMAELMGKETGFCKGKGGSMHIADIESGNLGANGVVGGGLTIAPGAALTQQYKKTGKI
VLCSFGDGASNEGTFHEGINLSSIWKLPIIFYCENNLYGMSTSIKRHMNIESIATRAASYGIEGISIDGY
NPIEVYETVQKAAEKCRRGEGPVLIESRTYRWLGHSKSDANVYRTKEEIESWKAKDPIEFLKNYLIENNL
SNEDELDKIQEFAKQSIEDAVEFAQNSPNPKIESLLEDVYAD
>gi|260685403|ref|YP_003216536.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase beta subunit [Clostridium difficile R20291]
MSTRELTYAQAIKEAMSEEMRRDENVIFMGEDIGIYGGAFGVSVGMIDEFGPERVRDTPISEAAIAGAAA
GAAATGLRPIMEVMFMDFVTISMDAIVNQAAKMRYMFGGKAQVPMVVRCPGGSGTGSAEQHSQSLEAWFC
HVPGVKVVAPSTPADAKGLLKAAIRDNNPVIFVENKLLYRKKGFVPEDDYVIEIGKADIKREGTDVTVIT
YGRMLQSVEEAAETLSKENINVEIIDLRTLYPLDKETIVKSVCKTGRVLICHEAAKTGGLGGEISALITE
SESFDYLDAPVKRICGKDVPIPYNPELEKAVVPRVDEIEEAIKSLIVR
>gi|260685404|ref|YP_003216537.1| E2 component of acetoin dehydrogenase enzyme system (dihydrolipoamide acetyltransferase) [Clostridium difficile R20291]
MVANKIKATPAARSQARKDNIKLDRLIGSGENGRIHLVDVLNYLKDNKANTTPLARRIAEDLNIDLETIV
GTGYSGKIRKCDVEKLTAKETIVSNNTSKYSEKKELKIENENSSMFNTVEGIFEKPNPMRATVAKRMSES
YFSAPVFTFNIEVDATELKVLRAKLIDTVKESTGVKLTMTDLIVMAVSKILPNHQALNSAWTDEGIFRYK
DVNIAIAVGLDEGLYVPVVKNANKKSLKEIAKESKELAEKVKTGKLMPADQEGNTFTISNVGMYGITTFT
PIINMPSSAILGVGATQDKFVPVNGEAKIKPIMNLSLTSDHRVIDGTVAAKFLKDLKELLENPLSMLV
>gi|260685405|ref|YP_003216538.1| E3 component of acetoin dehydrogenase enzyme system (dihydrolipoyl dehydrogenase) [Clostridium difficile R20291]
MSVEVIMPKAGVAMEEGTIVSWLKQEGEEVKIGEPILEITTDKVNMEIESEGEGTLAVIIHKEEGEVLPV
FTVIGVIAEKGENQEEVKAKYLSGNVSKEDIVEENQNIEVKEEKINKKECNHDYDVVVIGGGPGGYLSAL
KAALLGGRVALVEENILGGTCLNRGCIPTKTYIKTAEILEEIDQLSKRGVKVTVDKEQDIKKAIKYKNRV
VKKLTAGVGGLLKSRDVDVFNLKASVKEEHKVILSDGKVLDTENIIIATGSKVRILPIKGIESNLIITST
EALDLETVPEELVIIGGGVIGCEFAEIFNSRGSKVTIVEMEDRVIPRMDKELSESLKYSLSKKGINVLTK
KKVSEFKEEGNNILVCIEGEVPIKADLCLYAIGREANLSGIEDLDIKIDKGSIVVNSKMETSIPSIYAVG
DVTGGVMLAHAAFKMGEVAASNALGVNKEVDLGALPSCVYTIPEVASVGITEEDARKKYNVKVGKFNFAG
NGRALASGQEQGYVKVVADAKYGEILGIHMFGCGVAELINHAASFKALEIPTDEASELIFGHPCTSEALM
EALADVNGECLHLPKK
>gi|260685406|ref|YP_003216539.1| putative transcription antiterminator [Clostridium difficile R20291]
MRQRIKNLIENEDKKNPLTDEAISSRLNIRREDVTFLRNELKIEDSRQRRKVVLIKAIKDILKEEKTINK
NDITRRLNSIGFTVSRFTVIQYLKEIQDSGDLKLDKESDDKKEEIINNRENKDIAFDKLIGSSGSLSTII
KLAKAAILYPPHGLHTIIMGPTGVGKSELAECMYKFAVESSRFPKNAPFIVFNAADYSENPQLLLSQLFG
HVKGAFTGADENKEGLVSKADGGILFIDEIHRLPHEGQEILFQLIDKGMVRKLGETRLTHKIDVMIISAT
SEPIDSHLLNTFKRRIPVTIEIPELVARPLNERFDIINNFFLIEAQRMGANIHIKSDVLKALMLYDCIGN
VGQLRSDIQVACARGLLNQLTNKLKEVNISISDVPGYVKQGLIKIRNCRGKIENYVDGDLIIDSNLQGEI
EKKNEDIYTFPDEIYKLTERRHIDLLEQGLDFDVINRIIGGELESCIQKYIKQVKKVSISNNLPDISPIV
GKYIVELTYEVIKIASQYLSSLEPNLHLCLAVHLKAAFERLKEGKVISNAHLKEIIGNYPLEYSVAEKVA
QYLKERYNINLPKEEIGIIAIYFKMSSRRDMSEQKKIGVLLMAHGRVASSVCEVTNKLLGINHARYLDMP
FEKKPEEMIEEATTIIKDIDEGRGVIILVDMGSLSYFGDIISGKTGINIRTISRFDTLLSIEVIRRAVLP
DLTIDEIVDEVKGIEPQVKEKVSKCNNTKVDFRKPIILTLCITGLGGACKIKKILEENIKSITEKVDIEP
IGMIEYPSLDLEIKQISNDKNVIAIVGTIDPQIANIPFFSLVDINDKAKLNQINNLIDTNQIGETNKKYE
LSDLIHKEDIFVDLQVKSKEEVLKYMSKKLREKGYVTKNFYKKVVERDNLFPTELSDEIAIPHTDGIDVI
RPAISIAILKKPIVWSKSKVKIILLLAVDQKCFNPLSTLLSFIETDEFKKIKNIKDRDFIREMILDGVNE
NN
>gi|260685407|ref|YP_003216540.1| PTS system, IIa component [Clostridium difficile R20291]
MESMKIISSNLIFKNIEVSNNEDALKFLGQRLFDEQYVKESYIQAVVAREKKYATGLPTEIYGVAIPHTD
IVHVNEPGIAIGILNKPVKFIMMGTDDTEIDVKVVFMLAVKEPQEQLQLLEKLMTIFQDKNILNNIVDLS
EESVSDLLNSKLKN
>gi|260685408|ref|YP_003216541.1| PTS system, IIb component [Clostridium difficile R20291]
MGVTNVTKKILVACGTGVCTSTIAINKLKKALQDIGKLDMVNITQCKVVEVASKAPDYDLIICTTQVSSS
IKTPVINGLPFLTGVGMDKLINDVLEELEL
>gi|260685409|ref|YP_003216542.1| PTS system, IIc component [Clostridium difficile R20291]
MEGLYMEILNFIVGLGAQVMMPIIICIFGLILGTKLGKSLRAGLTVGVGFIGLNTIIALLTDNLGPATQQ
MVKNLGLSLSIIDVGWPAASAIAFASTVGALIIPIGLVVNIVMLITNTTQTVDVDIWDYWHFAFTGALVA
GATQSVMWGVFAAVANMVIVLVMADLTAPGIEEYLGMPGISLPHGFTQAFVPIAIVVNKLLDLIPGINKI
EINADTLQKKFGLFGEPLIMGSVIGVIIGIAAKYDIKGILQLGVTMGAVLILIPKMAALLMEGLLPVSEA
AQEFIEKRFKNRGKIYIGLDSAVGIGHPVTLSVALVLVPLTILIAAILPGNKVLPFADLAVIPFALVLIV
PITKGNVFRTLIIGIIIITSGLLIATNLAPLFTQMALNASFKMPEGATMISSICDGANPLSWVFVKVMNY
KVIGGVVFGVIALGMAIYNRNRIINENKKLSIEE
>gi|260685410|ref|YP_003216543.1| hypothetical protein CDR20291_0033 [Clostridium difficile R20291]
MKKYKYDSKRYLLSVTIPGFFMILILIYALFNNYINFNLNIYSLLIIVCTYGIFNTFISSSNPKKIIIDS
KCIHFTSFMTTHKYEIKDIEKIRIREFYNKKIYLKINDGDLFKGRYWIRTNMFNNSIALYSYFIELEECL
YPDSLRFRNKKFENKNI
>gi|260685411|ref|YP_003216544.1| putative sugar-phosphate aldolase [Clostridium difficile R20291]
MLLEKLRKEVLQASLDLLNYNLVTLTGGNVSGRDEQTGYIAITPSGMDYRNLTPSDIVIVDVDGNIIDGK
WKASVDLSDHLYIYKHREDINSIIHTHSTYSSCFAILNEPIECASTTLANEVGGSVPVAKFSPPTFKKMG
KCVIEAIGDKRACLLANHGVIAVGPSVGHALTAAVMLEDSAKVYYLAKSIGTPVLLPDEEIQRARDVFFN
VYGQDK
>gi|260685412|ref|YP_003216545.1| putative lipoate-protein ligase [Clostridium difficile R20291]
MYYLLNKSTNPYFNLALEEYLFLNDKYNDDIIIIWRNEDSIFIGKNQNPYQEVHHDVIEKGEIPILRRIS
GGGTVYHDLGNINMSFIQKDRQLHEIDFLEHTKFMQKMLSTLGLDVSITERKDLFLNGKKISGSAQSIKR
KNSLYHGTLLYDSDLNKLTKYLNSNKATESNATKSVSSKVTNIKFLLEKDINYFLDYCVEYLKSNIKNIK
ELELDEEDIKSVYNIGEDKYRKIEWTYGKTPKFQVVLPFNNESKINIHVNRWKVSKFFISYDDNVINMDK
LLDLNFFKEEIKESILENYPHYIDLINLIF
>gi|260685413|ref|YP_003216546.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Clostridium difficile R20291]
MMVKNKIRGDTMYSVIIVAAGSGRRMNLDINKQFIKLREKEIIAHTIQVFYENINIDEIVVCIKKEEEDF
FKENIINKYNFKNIKIAYGGKERQDSIYNGLKKLDENCDIVLIHDGARPFVDHRIINESIKVAKEKKAVV
VGVPVSDTIKIVSDGTVQETPERNLLWAAQTPQTFEYNLIIDAYEQAYKNNYYGTDDSMLVENIGQSVTM
VMGSYENIKITSPEDLNIAEQILNMEKRDEVNSRRRII
>gi|260685414|ref|YP_003216547.1| 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [Clostridium difficile R20291]
MRIGLGYDVHKLTENRKLIIGGVEIPHDKGLLGHSDADVLIHAIMDSILGALALGDIGKHFPDTDEEYKG
ADSMKLLEHVYNLITSKGYKIGNIDSTIIAQSPKMAPYIESMRSNISKVLNTDIDNINIKATTEEGLGFT
GAKQGIASQSICLLLLTSQNN
>gi|260685415|ref|YP_003216548.1| prolyl-tRNA synthetase [Clostridium difficile R20291]
MKMSKMFMPTLKEIPADAEITSHQLMVRSGMIKKMTSGVYNQLPMGLRVFKKIEQIIREELNKKDCQEIL
CAALLPSELWKESGRWTAMGEEMFRLKDRTEREYCLGPTHEEAFTDIIRQEITSYKQLPLNLYQIQVKYR
DERRPRFGVMRTKTFTMKDAYSFDVDDKGLDKSYQDMFDAYVSIFDRCGLENSPVQADSGAIGGSTSAEF
MVKSEVGEDEVVFCSGCDYAANVERAESCNLASQKEEMKELEEVHTPGAATIKELEEFLKTSPDKFAKTL
VYEADGKTVVVVVRGDREVNEIKVSNAIGSVIEFALATDDVVRKVTNAEVGFAGPIGINADYVFIDKEIV
EQRNIVVGANKTEYHIKNANYGRDFEGIVGDFRNVQEGDQCIVCGKPLEIARGVEVGHIFKLGTKYSESM
NANFIDKDGKSKPIVMGCYGIGVERTAAAIIEQHNDEKGIIWPLSVAPYHVVIVPANMKNEEQISIAENI
YNDLQAMGVEVLLDDRDERIGVKFNDSELIGIPMRITVGKNINEGKVEFKLRHKEDKEIIDIEEINEKVK
AEFIRNNVRLG
>gi|260685416|ref|YP_003216549.1| putative dual-specificity prolyl/cysteinyl-tRNA synthetase [Clostridium difficile R20291]
MYFIDTILSIYKDIKWCFFIKQINEEVIEMAKNEKQFVEEITKMEDDFPQWYTDVITKTDLVDYAPVKGF
MVVKPYGYALWEKMQEFMDKKFKETGHKNCYFPLLIPESLLNKEAEHVEGFAPEVAWVTHGGNKKLEERL
CVRPTSETIICTMYAKWLKSYRELPYLYNQWCSVVRWEKSTRPFLRTSEFLWQEGHTLHETAEEAQEETI
QQLEVYKALCEELLAMPVVAGQKSESEKFAGGERTYTIEAMMHDGKALQSGTSHFLGQHFTKAFDITFAD
REGNLANPYHTSWGASTRLIGGLIMTHSDNRGLVLPPRVAPIQVVIVPIAAKKGNVMETVDKIYADLKTK
GVAVEVDDRDNYTTGWKFNEWEMKGAPVRVEIGPKDIENNQAMVFRRDTLEKDSMPLEGLADAICDLFDV
IHNDMFEKARKHREDNTSIVENMDEFRKALEEKPGFIKTMWCGDAECEAKIKEETGATIRCLPFEQENLG
HKCVYCGKEADSMVVMAKAY
>gi|260685417|ref|YP_003216550.1| glutamyl-tRNA synthetase [Clostridium difficile R20291]
MNVRVRFAPSPTGFVHIGSLRTALYNYLFAKKMGGEYILRVEDTDQSRLVEGAIENMLNAMKWAGVNHSE
GVILDDSGKVVQKGEYGPYIQSQRLDIYQEYIKQLLDSGKAYYCFCTKERLDEVRDAQRAAGETAKYDGH
CKNLSKEEVEANIKAGIPYVIRLRLPENHTIKFTDLVRGDMEFNTNDLDDQVLMKTDGFPTYHFAVVVDD
YLMKITHVIRGEEWVSSTPKHVYLYEAFGWEAPVFVHLPNILNKEKKKLSKRQGDVAVEDFKKKGYLPEG
LVNYVALVGWSPEDNQELFTMEELEKAFSVERVSKSGGVFDTEKLNWVNQHYIKDGDDAYLTDLAIPFLV
EDGFITEEEATNKYDFLKSMISVLKEKLQYVKEITEHASIFFGDKIEVETEEGREFLRLEHIPTLIDALR
EKIEKTEVLNAEFVQAMLKEIQKEYKIKGKNLFMGSRIILTGQMHGPDLPKVMEVLGKETCLNRIAYVKN
NIL
>gi|260685418|ref|YP_003216551.1| cysteinyl-tRNA synthetase [Clostridium difficile R20291]
MSVKVYNTLTRTKEEFVPLEEGKVKMYVCGPTVYNYIHIGNARPFIIFDTLRRYLEYRGYDVTYVQNFTD
VDDKIINRSHEEGISPEEVAAKYIKEYFVDCDGLGIKRATVHPQVTDNIQQIIEFIKELEDKGYAYAVNG
DVYFDTNKFEGYGKLSGQKQEDLEAGARIEVNDQKRHPMDFVLWKAKKEGEPGWDSPWGEGRPGWHIECS
VMSKRYLGETIDIHAGGQDLTFPHHENEIAQSEARSGKIFSKYWMHNGYININDEKMSKSKGNFFTVRDI
SKLYDLEIVRFFMLSAHYRNPVNFSDEMLNQAKAGLERLYNTKEKLEFTLSNLVESPLTEKEVELVKELD
DFRQKFIDAMDDDVNTADAVSVIFELAKLINSNVDENSSLEFAKKCLDEFNELTGVLNIVNKKKDTVLDK
DIEELIQKRTDAKKNKEFQLADDIRQQLLDMGIVLEDTRQGVKWKRI
>gi|260685419|ref|YP_003216552.1| hypothetical protein CDR20291_0042 [Clostridium difficile R20291]
MEKTELVTMSPLVLAYLGDTVYETYIREYLIRQNTQRKVNDLHKLAIKYVKAKAQATIIHEIEIELTEEE
SKIYKRGRNQKSNTSPKNADIIDYKHATGFEALVGYLYLNNEIERLQYIINKGIKIIERDM
>gi|260685420|ref|YP_003216553.1| thymidylate synthase [Clostridium difficile R20291]
MSLADKIFIDMCNNILENGVSSDGEVVRAKWDDGQPAHTIKKFCVVNRYDLSKEFPILTLRPTNLKAAID
ELLWIWQKKSNNINDLNSRIWDSWADETGSIGKAYGYQIGQKHKYKEGEFDQIDRVIYDLKYNPYSRRII
TNIYNHNDLNEMNLYPCAYSMTFNVTGNRLNAILNQRSNDILVANNWNVTQYAILVHMLAQISDLEVGEL
VHVIADAHIYDRHIPLVKELINRESYDAPKLIINPNIKNFYDFRVEDFTLENYKSGPQIKKIPVAI
>gi|260685421|ref|YP_003216554.1| dihydrofolate reductase region [Clostridium difficile R20291]
MKVIVAVDLNWGIGYGGKLLQSIPEDMKFFKEKTVGNVVVMGRETFKSLPGKKALKDRVNIVLTRSKSFN
DDRLIVCNSIDETLKELQKYENDKIFIIGGETVYKQFLPYCNELYVTKIQKTYEADRFFPNIDIMSNWDL
IKESEVKEYNNIRYVFSTYINNSL
>gi|260685422|ref|YP_003216555.1| hypothetical protein CDR20291_0045 [Clostridium difficile R20291]
MKKDIFVNRVSNALENDRGAVFVGSGISFSSTEVDWFKLLEPLVNELDITLDNKSDDLPMIAQYIVNNYS
GNRGPLVNEISKTFNRKFKLNKYHKYLATTKLSTIWTTNYDMLLEDAFYDFDTSVKVSDDSITRNRLEYD
VEIIKMHGCISRSDWNEIVITQEDYDDFSINKPAISQRLSEDLINKSFLFIGYSYRDPNIRNIMINARRL
SKKHTQQHYIILKKLKDSDSNITQDDVVRQELWCNDLKRLGISTLFIDEYSELEELLREISQKSRGKTVY
VTGSHKESNMNARKLGTKLAKHKDITLLSGQSSGIGSEVVAAFTEECIKSKEDIINRMKIFPNPYSADEK
YSDDITLIPDLKKCRTKMLNSTQVVVVFSGGIGTEAEIDVAIKQNCNIIPVITCKEDRENPAIKKILNYS
DNMKNIEIKDATYYNKIVDEDGVVTMEEIYICISKIMN
>gi|260685423|ref|YP_003216556.1| thiamine biosynthesis protein thic [Clostridium difficile R20291]
MENGVGMITIHPTANKQIFEDSKNRMVPVTSRGGGMVIQDLISKNFSEDNVYLKILPEIIKYAQKHNVCI
SLGATFRSGNIFDSNDRAQITEIKSQIELAKRIYKSNVGVIIESPGHSRPSDIIKISSILKKEGFPIMPL
GPIPTDIAIGMDHIAAAIGATIMGIEGCANIISTVTREEHTGGRPSIESTVESIRTAKIAAHIIDIHQMN
DINLDMSVSKSRAKSNTCIFGKDTRYCDRCRELCPLCIR
>gi|260685424|ref|YP_003216557.1| putative thymidylate synthase [Clostridium difficile R20291]
MKKYQEDYDKLVEILFENHYNKLIKGGKNEKTSKRQVEKKAIEDARYVFPNACETKMVFTINARSLFNFF
EHRCYENGSCLEGTMTCGDIVQVRKKFKNL
>gi|260685425|ref|YP_003216558.1| putative tRNA/rRNA methyltransferase [Clostridium difficile R20291]
MNNLASIEGRNPVIEAIKSDREIDKILIANSAKEGSIKKIIGMAKDKNIIIQYVDKHKLDEVSTSHSHQG
VIAYASEYKYYELDELIDLAKNKDEDPFFIILDEITDPHNLGSIIRTADAVGAHGVIIPKRRSVHITPVV
AKASAGAVEYMPVCKVTNIVNTIKRLKEEGLWIAAADMDGETFYKQNLTGPLGVVIGSEGFGISRLVKQN
CDFIVKMPMIGNVTSLNASVAGGILLYEIFRQRLDKSK
>gi|260685426|ref|YP_003216559.1| hypothetical protein CDR20291_0049 [Clostridium difficile R20291]
MKKNINHYLIIDGYNIINAWDNLKELAKEDLEDSREKLIDDIIEFSEFMGYKTIIVFDAYNVKNSREKVE
KRKHITIVYTREHQTADSYIEKFITSLSKYDDVKVATNDYAEQQMILGKGATRMSARELKLELDRSKNKM
KEKNIGLRKKIQRNWLEERLDKETLSKLENIRRKR
>gi|260685427|ref|YP_003216560.1| RNA polymerase sigma-H factor [Clostridium difficile R20291]
MGEIYMLVAKEKSYELVDNCQQDEYNIVLRASEGDKIALEYIITKYRNFVKAKAKSYFLIGADKEDIIQE
GMIGLYKAVRDFDGSKTNSFKCFAEICITRQIITAIKTATRQKHIPLNSYVSLNKPIYDEESDRTLLDII
ATSIVTDPEELIISKEELKNIESKMNELLSDLELEVLELYLNGKSYQFIADKLKRDVKSIDNALQRVKRK
LEKHLENRND
>gi|260685428|ref|YP_003216561.1| elongation factor TU [Clostridium difficile R20291]
MAKAKYERTKPHVNIGTIGHVDHGKTTLTAAITKTLYDRYQLGEAVDFANIDKAPEERERGITISTAHVE
YETPNRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSATDGPMPQTREHILLSRQVGVPYIVVFLNKCD
MVDDEELLELVEMEVRDLLTEYDFPGDDTPIVRGSALMALEDPKSEWGDKIVELFEQIDEYIPAPERDTD
KPFLMPVEDVFSITGRGTVATGRVERGVLKVQDEVELVGLTEAPRKVVVTGVEMFRKLLDQAQAGDNIGA
LLRGVQRNEIERGQVLAKTGSVKAHTKFTAEVYVLKKEEGGRHTPFFDGYRPQFYFRTTDVTGACKLPEG
IEMVMPGDNVTMEVDLINSIVVEEGLRFSIREGGRTVASGVVATIIE
>gi|260685429|ref|YP_003216562.1| 50S ribosomal protein L33 [Clostridium difficile R20291]
MRVKVTLACTECKQRNYNTTKNKKNNPDRIELQKYCRFCKKHTTHKETK
>gi|260685430|ref|YP_003216563.1| preprotein translocase SecE subunit [Clostridium difficile R20291]
MAAQKNDGAKTKKRFSLFGYLKETKQELKRVTWPTKKELFKNTSIVLTVVISCTILVWGIDTILSGALAL
LLK
>gi|260685431|ref|YP_003216564.1| transcription antitermination protein [Clostridium difficile R20291]
MSELQEASWYVVHTYSGHENKVKATIEKAVKTRGMEDCIRQVVVPTEEVVETTKTGKEKTRQRKVYPSYV
LVKMIITDESWYVVRNTKGVTGFVGPGSKPVPLSEDEVKAMGIDTTDPKVVNSDVDFEIGDTVKVSQGPF
SGQIGNIEEIDLENREVKVCINAFGKRTLFVIELEGIEKI
>gi|260685432|ref|YP_003216565.1| 50S ribosomal protein L11 [Clostridium difficile R20291]
MAKKVIGQIKLQIPAGKATPAPPVGPALGQHGVNIMGFTKEFNAKTADQAGMIIPVVITVYQDRSFSFIT
KTPPAAVLIKKALNLKSGSGEPNKKKVAKMTSAQVREIAELKMPDLNAASVEAAMSMIAGTARSMGVVIE
D
>gi|260685433|ref|YP_003216566.1| 50S ribosomal protein L1 [Clostridium difficile R20291]
MAKKGKRYAGALQKVDRTKFYDASEALTLVSDIAGAKFDETVEAHIKLGVDSRHADQQVRGAVVLPHGTG
KTKRVLVFAKGEKAKEAEQAGADFVGAEELVQKIQGENWFDFDIVVATPDMMGVVGRLGRVLGPKGLMPN
PKSGTVTFDVAKAIDEIKAGKVEYRLDKTNIIHVPVGKVSFGGEKLTENFTALMDAIIKAKPAAAKGQYL
RSITVASSMGPGVKINPARTAE
>gi|260685434|ref|YP_003216567.1| 50S ribosomal protein L10 [Clostridium difficile R20291]
MRKAIEIKSEVVSEIVEKLQKSSAAVVVDYKGLTVEEVTELRKQMREAGVDYKVYKNTLVRRAAKEVGIE
QFNDELLVGTNAIAFGYDDPVAPARILKGFMDSHPKMKLKMGIVEGAFYDESKIVEMANIPSREVLIAKL
LGSLKAPVSNFAYLIDAIAKKAEGQEEA
>gi|260685435|ref|YP_003216568.1| 50S ribosomal protein L7/L12 [Clostridium difficile R20291]
MTIEQILEAIENMKVLELNELVKAAEEKFGVSASAPVMVAGAAAGGPAAEEKTEFDVVLTDVGSSKVGVI
KAVREITGLGLKEAKEVVDNAPKTVKEGASKEEADQIKEKLEAAGAKVEVK
>gi|260685436|ref|YP_003216569.1| NADP-dependent 7-alpha-hydroxysteroid dehydrogenase [Clostridium difficile R20291]
MEKLQGKIAVVTAATKGIGLASAEILAKNGATVYLAARSEELANEVINKISAEGGCAKFVYFNAREEETF
TSMIEEVVKKEGKIDILVNNFGSTNPSLDKDLVTGDTDNFFDTVNTNLKSVYLPCKAAIPHMIKNGKGSI
VNISSIGSVLPDLSRIAYCVSKAAINSLTQNIATQYAKDNVRCNAVLPGLIATKAALDNMSPEFIKEFLK
HVPLNRIGEPDDIAKAVLFYASDDSSFITGDLLEVAGGFGLPTPQFADNILG
>gi|260685437|ref|YP_003216570.1| DNA-directed RNA polymerase beta chain [Clostridium difficile R20291]
MPHPVTIGKRTRMSFSKIKEIADVPNLIEIQVDSYEWFLKEGLKEVFDDISPIEDYTGNLILEFVDYSLD
DKPKYDIEECKERDATYCAPLKVKVRLINKETGEIKEQEVFMGDFPLMTERGTFVINGAERVIVSQLVRS
PGVYYAEERDKTGKRLISSTVIPNRGAWLEYETDSNDVISVRVDRTRKQPVTVLLRALGIGTDAEIIDLL
GEDERLSATLEKDNTKTVEEGLVEIYKKLRPGEPPTVESASSLLNALFFDPKRYDLAKVGRYKFNKKLAL
CYRIMNKISAEDIINPETGEVFVKAGEKISYDLAKAIQNAGINVVNLLMDDDKKVRVIGNNFVDIKSHID
FDIDDLNIKEKVHYPTLKEILDGYSDEEEIKEAIKSRIKELIPKHILLDDIIASISYEFNIFYNIGNIDD
IDHLGNRRIRSVGELLQNQVRIGLSRMERVIKERMTVQDMEAITPQALVNIRPVSAAIKEFFGSSQLSQF
MDQTNPLSELTHKRRLSALGPGGLSRERAGFEVRDVHHSHYGRMCPIETPEGPNIGLINSLGTYAKINEF
GFIESPYRKFDKETSTVTDEIHYLTADEEDLFVRAQANEPLTEDGKFVNHRVVCRTVNGAVEMVPESRVD
YMDISPKQVVSVATAMIPFLENDDANRALMGANMQRQAVPLVRREAPIIGTGIEYRAAKDSGAVVVARNS
GIAERVTADEIIIKREDGNRDRYNLLKFKRSNSGTCINQTPIINKGDQIIKGDVIADGPATDLGEVALGR
NCLIAFMTWEGYNYEDAILINERLVKEDRLSTIHIEEYECEARDTKLGPEEITRDIPNVGDSAIKNLDDR
GIIRIGAEVDSGDILVGKVTPKGETELTAEERLLRAIFGEKAREVRDTSLKVPHGESGIIVDVKVFTREN
GDDLSPGVNELVRCYIAKKRKIKVGDKMAGRHGNKGVISRVLPEEDMPFMENGTPLDIILNPQGIPSRMN
IGQVLEVHLGLAAKTLGWYVATSVFDGANEYDIMDALEEAGYPRDGKLTLYDGRTGQSFDNRITVGYMYY
LKLHHLVDEKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAHILQEILTVKSDDVVGRV
RTYEAIVKGENIPEPGIPESFKVLIKELQSLCLDVKVLTDEDQEIEVRESVDEDDTIGEFELDVVNHMGE
VEESNIIEEIEDDFVEATEDEDIENLEEFTEDDLFEEEIDFESDDFDM
>gi|260685438|ref|YP_003216571.1| DNA-directed RNA polymerase beta' chain [Clostridium difficile R20291]
MFELNNFESIKIALASPEKIRQWSRGEVKKPETINYRTLKPEKDGLFCERIFGPQKDWECHCGKYRRVRY
KGVVCDRCGVEVTKSKVRRERMGHIELAAPMSHIWYFKGIPSRMGLLLDMSPRSLEKILYFASYVVVDPG
ETGLNEKQLLTEKEYRTALEKYGYTFTVGMGAEAVKTLLQNIDLEQQSKDLRAELKDSTGQKKVRTIRRL
EVVEAFKKSGNKPEWMILDAIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLELGAPDII
VRNEKRMLQEAVDALIDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPEL
KFYQCGLPKKMALELFKPFVMDKLVKEGYAHNIKSAKSIVEKVKPEVWDVLEDVIKSHPVLLNRAPTLHR
LGIQAFEPILVEGKAIKLHPLVCTAYNADFDGDQMAVHVPLSVEAQAEARFLMLSVNNILAPKDGSPITT
PSQDMVLGCYYLTIEAQDGAKGTGMVFKDFNELLLAYYNKSVHLHALVKLKVTLEDGRSSLVESTVGRFI
FNENIPQDLGFVDRKENPFALEVDFLADKKSLGKIIDKCFRKHGNTETAELLDYIKALGFKYSTLGGITV
AVDDMSVPEEKKVFIAEAEAKVDKYEKAYRRGLISDEERYEKVIETWTETTDKVTDALMGGLDRLNNIYI
MAHSGARGSKNQIRQLAGMRGLMANASGKTVEIPVKSNFREGLSVLEYFTSSHGARKGLADTAIRTAESG
YLTRRLVDVSQDVIVREIDCGTEDTTEIYAIKEGNEVIEEIYDRIVGRYTIDPILNPETGEVLVEADSMI
QEDEAETIVALGIEKIRIRTVLNCKTNHGVCSKCYGRNLATGKEVNIGEAVGIIAAQSIGEPGTQLTMRT
FHTGGVAGADITQGLPRVEELFEARKPKGLAVITEVSGRVEIDETGKRKEVNVIPEEGETQTYVIPYGSR
LKVKQGQMLEAGDPLTQGFINPHDIVRVNGVKGVQEYIVKEVQRVYRLQGVDVNDKHIEVIVRQMLSKVK
VEDPGDTDLLPGGYEDVLTFNECNKDAIDKGLRPAVAKRVLLGITKASLATDSFLSAASFQETTRVLTEA
AIKGKEDHLIGLKENVILGKLIPAGTGMKKYRNIAVEKIED
>gi|260685439|ref|YP_003216572.1| 30S ribosomal protein S12 [Clostridium difficile R20291]
MMPTINQLVRKSRKALEKKSTAPALQKGYNSLNKKVTDASAPQKRGVCTSVKTVTPKKPNSALRKVARVR
LTNGIEVSAYIPGEGHNLQEHSVVLIRGGRVKDLPGVRYHILRGTLDTAGVDKRRQSRSKYGAKRPKEAK
K
>gi|260685440|ref|YP_003216573.1| 30S ribosomal protein S7 [Clostridium difficile R20291]
MPRKGNIPKREVLPDPMYGSKVVTKLINNLMVDGKKGKSQRIVYDAFAIVAEKTGEEALEVFNKAMDNIM
PVLEVKARRVGGANYQVPIEVRPERRQTLGLRWLVKYTRARGEKGMVEKLAKEIMDAANNTGASVKKKED
THKMAEANKAFAHYRW
>gi|260685441|ref|YP_003216574.1| translation elongation factor G [Clostridium difficile R20291]
MARKFPLEKTRNIGIMAHIDAGKTTTTERILFYTGQTHKIGETHEGASQMDWMEQEKERGITITSAATTA
SWKDHRINIIDTPGHVDFTVEVERSLRVLDGSVAVFCAKGGVEPQSENVWRQAETYGVPRIAFINKMDIL
GADFYNVISMMKSRLNSNAVPMQLPIGKEDSFIGIIDLLKMDAVIYKDDLGVEMEETDIPEDMKELAAEW
REKLVESVAETDEELMMKYLEGEELTIDELKVAIRKATIACEMNPVFCGTAYRNKGVQLVIDAVLDYLPA
PTDIPAIKGILADGEEAERHSSDEEPFSALAFKIMTDPFVGKLAFFRVYSGTLESGSYVLNATKNKRERI
GRILQMHANTREEITKVYAGDIAAAVGLKDTTTGDTLCDPANPIILESMEFPEPVISVAIEPSSKAAQEK
MGIALQKLAEEDPTFTVKTDQETGQTIISGMGELHLEIIVDRLLREFKVEAKVGAPQVAYRETITQPVDV
EYKYSKQSGGRGQYGHVKIRVAPQEPGEGYKFTNKTVGGSVPKEYVGPVDMGIQGAMQSGIVAGYPVVDV
AVELYDGSYHEVDSSEMAFKMAGSMAFKDAMKKGNAVLLEPYFKVEVVTPEDYMGDVMGDLNSRRGLIQG
MEARSGAQVINAFVPLSEMFGYSTDLRSSTQGRATYTMIFDHYEQVPASVAKKIAEGK
>gi|260685442|ref|YP_003216575.1| elongation factor TU [Clostridium difficile R20291]
MAKAKYERTKPHVNIGTIGHVDHGKTTLTAAITKTLYDRYQLGEAVDFANIDKAPEERERGITISTAHVE
YETPNRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSATDGPMPQTREHILLSRQVGVPYIVVFLNKCD
MVDDEELLELVEMEVRDLLTEYDFPGDDTPIVRGSALMALEDPKSEWGDKIVELFEQIDEYIPAPERDTD
KPFLMPVEDVFSITGRGTVATGRVERGVLKVQDEVELVGLTEAPRKVVVTGVEMFRKLLDQAQAGDNIGA
LLRGVQRNEIERGQVLAKTGSVKAHTKFTAEVYVLKKEEGGRHTPFFDGYRPQFYFRTTDVTGACKLPEG
IEMVMPGDNVTMEVDLINSIVVEEGLRFSIREGGRTVASGVVATIIE
>gi|260685443|ref|YP_003216576.1| 30S ribosomal protein S10 [Clostridium difficile R20291]
MAKNEKIRIRLKSYDHKLLDFSAGKIVETAKKAGSQVSGPVPLPTEKQVVTILRAVHKYKDSREQFEIRT
HKRLIDIANPTPKTVDSLMRLDLPAGVDIEIKL
>gi|260685444|ref|YP_003216577.1| 50S ribosomal protein L3 [Clostridium difficile R20291]
MKGILGKKVGMTQIFTDKGVVIPVTAVEAGPMVVTQIKTVDKDGYNAIQIGFEDAKEKALNKPKKGHLAA
ANVLKKHLKEFRVDSVEGYTVGQEIKADVFEAGAKIDVTGISKGKGFQGPIKRHGQSRGPETHGSRYHRR
PGSMGACSYPGRVFKNKKLAGHMGSVKVTVQNLEVVKVDADKNLILVKGAIPGAKGSVVTIKEAIKVSK
>gi|260685445|ref|YP_003216578.1| 50S ribosomal protein L4 [Clostridium difficile R20291]
MTNLEKGGITMPKLNVLNVSGQNVGEIELSDSIFGVEVNGHVLYEVVKNQLANKRQGTQSAKTRAEVRGG
GRKPWKQKGTGRARQGSTRSVQWVGGGVAFAPKPRSYKYTLPKKVRRLAMKSALSSKVQNSEVIVLDALN
MDAPKTKEFAQILNNINAAKKALVVIADKNDNVIKSARNIEGVQTALVNTMNVYDILKYDSFIITTDAVK
KVEEVYA
>gi|260685446|ref|YP_003216579.1| 50S ribosomal protein L23 [Clostridium difficile R20291]
MTNPHDVIIRPVVTEHSMAEMGEKKYTFVVAKDANKTEIKKAVEKVFGVSVDKVNTLNYDGKVKRMGRTQ
GRTASFKKAVVKLTADSKEIEFFQGM
>gi|260685447|ref|YP_003216580.1| 50S ribosomal protein L2 [Clostridium difficile R20291]
MAIKKFRPTSPALRQMTVLVSDEITCNQPEKSLLVNLKKNAGRNVHGRITVRHRGGGQKRKYRIIDFKRD
KDGIPAKVATIEYDPNRTANIALLNYADGEKRYILAPVGINVGDTILSGLGADIKPGNCLALKDMPVGTI
IHNIELKPGKGAQLVRSAGVSAQLMAKEGKNALLRLPSGEMRLVSINCKATIGQVGNIEHGNVVIGKAGR
KRHMGIRPTVRGSVMNPNDHPHGGGEGRSPIGRPSPVTPWGKPALGYKTRKKNKASNKLIVSRRTK
>gi|260685448|ref|YP_003216581.1| 30S ribosomal protein S19 [Clostridium difficile R20291]
MSRSTKKGPFVHARLLKKIEAMNASGNKEVIKTWSRSSTVFPQMVENTIAVHDGRKHVPVYITEDMVGHK
LGEFVPTRTFKGHKDDEKSNKRK
>gi|260685449|ref|YP_003216582.1| 50S ribosomal protein L22 [Clostridium difficile R20291]
MEAKATAKYVRVSPRKAGQICDLVRGKNVDEALAILKFTPRGAASIIAKVVKSAKANAENNHEMDTEKLY
IASIVANQGPTMKRFMPRAMGRATTIRKRTSHIEVVVKEKK
>gi|260685450|ref|YP_003216583.1| 30S ribosomal protein S3 [Clostridium difficile R20291]
MGQKVNPHGLRVGVIKDWDSRWFATDKKEFGNLLLEDHNIRKFLKKRLYSAGVAKIEIERSANKIKMDLH
VAKPGVVIGRAGAGIEALKAELEKMTKKTIIVNIVEVRSTDKNAQLVAENIALAIERRVAFRRAMKQAIQ
RAMKSGAKGIKVSASGRLGGAEMARTEGYSEGNVPLQTLRADIDYGFAEADTTYGKIGIKVWICNGEVLP
TRDGVNPREESRKSDRRDNKRDNRRNDRRGNDRRGNDNRGNYRGQRPQGGSRPQRTENKGN
>gi|260685451|ref|YP_003216584.1| 50S ribosomal protein L16 [Clostridium difficile R20291]
MLMPKRVKRRRVHRGSMAGQAHKGNKVTYGEFGLVALEASWITSNQIEAARIAMTRYIKRGGKVWIKIFP
HKPVTRKPAETRMGAGKGSPEYWVAVVKPGRVMFELAGVSEDKAREAMRLAAHKLPIKCKFVKKEDLEVK
GGE
>gi|260685452|ref|YP_003216585.1| 50S ribosomal protein L29 [Clostridium difficile R20291]
MKAKELRDLTSEELMNKLNDFKSELFSLRFQLATGQLENTARIKFVKKDIAKVKTVLAERKLYETRA
>gi|260685453|ref|YP_003216586.1| 30S ribosomal protein S17 [Clostridium difficile R20291]
MERGRRKVRIGRVVSDKMDKTIVVAVEEFVRHPLYNKRVKRTKKFKAHDEKNICNIGDRVKIMETRPLSK
DKRFRLVEVVEKVK
>gi|260685454|ref|YP_003216587.1| 50S ribosomal protein L14 [Clostridium difficile R20291]
MIQQESRLRVADNSGAKELLCIRVLGGSKRRYGNIGDVIVATVKSATPGGVVKKGKVVKAVIVRSKQGVR
RNDGSYISFDENAAVIIKDDKTPVGTRIFGPVARELRDNEFMKIVSLAPEVL
>gi|260685455|ref|YP_003216588.1| 50S ribosomal protein L24 [Clostridium difficile R20291]
MMRVKKGDTVVVIAGKDKGKKGSVLKVYPKTSKVLVEGVNVITKHQKPSAMNQQGGIINKEAPIHISNVM
PFDPETGKGVRVRYEVKDGNKVRVSAKSGKEL
>gi|260685456|ref|YP_003216589.1| 50S ribosomal protein L5 [Clostridium difficile R20291]
MASRLQEKYMKEVAPALMEKFGYKNVMEIPKLNKIVINMGIGDARENPKGLEKGVEELEMISGQKPVITK
ARKSVANFKLREGMPIGTKVTLRADKMFYFMDKLVSVSLPRVRDFRGVNPNAFDGRGNYALGVKEQLIFP
EIEYDKIDKVRGMDIIFVTTAKTDEEARELLKLLGMPFSK
>gi|260685457|ref|YP_003216590.1| 30S ribosomal protein S14 [Clostridium difficile R20291]
MARKAMVVKQQRKQKYATREYTRCTICGRPHSVLKKFGICRICFRELAYKGQIPGVRKASW
>gi|260685458|ref|YP_003216591.1| 30S ribosomal protein S8 [Clostridium difficile R20291]
MTMTDPIADMLTRIRNANVVKHETVDVPASNMKKELARILLEEGFIRGYDVIEDGKQGIIRIQLKYGQEG
ERVITGLKKISKPGMRVYAANHEIPKVLNGLGISVISTSKGILTDKQARKENVGGEVICYVW
>gi|260685459|ref|YP_003216592.1| 50S ribosomal protein L6 [Clostridium difficile R20291]
MSRIGVKPIIIPAGVEVTIAEGNLVTVKGPKGTLTKQLSAELNIKKEENTIMVERPTDNKKHRSLHGLTR
TLLDNMVVGVNTGFEKKLELKGVGYRAQKQGKKLVMNLGFSHPVEMEDPEGITVEAPNQTELIVKGIDKQ
LVGNYAAKIRAWRKPEPYKGKGIKYVDEVIRRKEGKTGKK
>gi|260685460|ref|YP_003216593.1| 50S ribosomal protein L18 [Clostridium difficile R20291]
MLKKADKNANRLQRHKRVRRKISGTSQRPRLCVFRSANNIYAQIIDDTKRVTLVAASSLEAEVKSAVNHT
GNKEAAKKVGELVAKKAVEKGITEVVFDRGGYLYHGRIQELAEGAREAGLKF
>gi|260685461|ref|YP_003216594.1| 30S ribosomal protein S5 [Clostridium difficile R20291]
MLRRKPIDAGQLDLQEKVVEVRRVTKVVKGGRNFRFAALVVVGDENGHVGIGAGKAMEVPDAIKKAVEDA
KKNLIVVPIVGTTIPHEVRGHFGAGNILIMPAVEGTGVIAGGPARAVLELAGLKDVRAKSLGSNNPRNMV
NATIEGLNSLKTVEDIAKLRGKKVEELLG
>gi|260685462|ref|YP_003216595.1| 50S ribosomal protein L30 [Clostridium difficile R20291]
MAKLQIKLVRSVIGTTPNQKKNVEALGLRKREQVVVKEDNAQTRGMINKVSHLLEVTEIAE
>gi|260685463|ref|YP_003216596.1| 50S ribosomal protein L15 [Clostridium difficile R20291]
MKLHELKPAEGAVRAKRRLGRGTATGQGKTAGRGQKGQWSRSGGGVRVGFEGGQMPLARRLPKRGFNNIF
KKVYTEVNVEVLNRFENGTEITAELLKSTKTISKIGKDGIKILGEGNLEKALTVKAAKFTASAQEKIEKA
GGKAELV
>gi|260685464|ref|YP_003216597.1| preprotein translocase SecY subunit [Clostridium difficile R20291]
MLSKLKQAWKIKAVRKKVMYTLMMIVIFRIGTTIPVPGIDTSIIQKMVGGNSLLSLYNMFTGGAFSNFSL
FALGISPYITASIIIQLLTVGFESLAELQKSGEEGKKKINKYTKYTALALAVVQALGITLGIVRSALISN
SVFFITTVVITLVSASMLVMWIGDKITEKGIGNGSSVIIFAGIISRIPTDVIKISQQVKSGEVAPWVIVI
LAVVILLTVTGVTFIQEATRKIPVQYAKRVVGRKMYGGQSSHIPMKVNQSGVMPIIFASSLLAFPQTIAM
FMGPNAQAFVQKYLSMATEQGFWTYRSIEILLIIFFSYFYTTVSFNTEDISKNMKNNGGFIPGIRPGEPT
MDYLNRILTRLTLAGATFLAIIAMVPALTTHYMKVNMSLAGTSLLIVVGVALELKRQLESNLVMRSYQGF
LK
>gi|260685465|ref|YP_003216598.1| adenylate kinase [Clostridium difficile R20291]
MEMDNMRIILLGPPGAGKGTQAAGIVEKYNIPHISTGDIFRKNIKEGTELGKKAKEYMDQGLLVPDELTV
GLVTDRISQEDCKNGFMLDGFPRNVAQGEHLDIFLKNAGISLDKVVNIEVDKSILVSRAVGRRICKSCGA
TYHVEFNPPKVEGVCDVCQGELYQRADDNEETVSKRIQVYLDETKPLVDYYSKQGIIADIKGDQAIDKVF
EDIVAALGSGK
>gi|260685466|ref|YP_003216599.1| methionine aminopeptidase [Clostridium difficile R20291]
MIILKSKKEIELLREAGKIVADTHEVLRKAISPGISTLELDKIAEENIRKYNAEPSFKGYGGFPGSICAS
INREVVHGIPGETILQEGDIVSLDIGAYYKGYHGDSAKTHGVGMISEEDRKLIEVTRESFYEGIKFAKLG
YRLSDISHAVQTHVEKHGFSVVRDLVGHGVGANLHEDPQVPNYGLPGKGPRLREGMVIAIEPMVNAGRYH
VKTLSDGWTTVTIDGKKSAHYEHTIAITEHEPLILTKL
>gi|260685467|ref|YP_003216600.1| putative ribosomal protein [Clostridium difficile R20291]
MKKVLSDNLSIGQVVKVSLGRDKGNLFFVVKIINNEYVLIADGKKRKLDKPKLKKVKHLKKYDFINDEVR
KRVVSGQEITDSFLRAELTKLN
>gi|260685468|ref|YP_003216601.1| translation initiation factor IF-1 [Clostridium difficile R20291]
MAKKDVIELEGTVSEALPNAMFKVKLENGHEILCHISGKLRMNFIRILEGDKVNVELSPYDLTRGRITWR
KK
>gi|260685469|ref|YP_003216602.1| 50S ribosomal protein L36 [Clostridium difficile R20291]
MKVRPSVKPICEKCKVIKRKGKVMVICENPKHKQKQG
>gi|260685470|ref|YP_003216603.1| 30S ribosomal protein S13 [Clostridium difficile R20291]
MARIAGVDLPREKRAEIGLTYIYGIGKATANEILAKAEINPDTRIKDLSEDQVNELRKVIDDDFLVEGDL
RREIALNIKRLRDIKCYRGIRHAKGLPLRGQRTKTNARTRKGPRKTVSRKKKK
>gi|260685471|ref|YP_003216604.1| 30S ribosomal protein S11 [Clostridium difficile R20291]
MAKPKKKVTRIRRRERKNIERGHAHIQSTFNNTIITLTDVHGNAISWASSGQLGFKGSRKSTPFASQMAA
ETAAKAAMEHGLKSVEVFVKGPGSGREAAIRALQATGLEVTMIKDVTPIPHNGCRPPKRRRV
>gi|260685472|ref|YP_003216605.1| 30S ribosomal protein S4 [Clostridium difficile R20291]
MARYTGASCRQCRREGMKLFLKGDRCYTDKCAIVKRNYAPGQHGQGRKKVSNYGLQLREKQKVKRIYGVL
ETQFRNLYERAENMPGKAGENLLSLLERRLDNVVYRMGLASSRKEARQLVTHGHFTLNGNKVDIPSLIVK
VGDVIEVKEKSRSSAKFKNLVEVNSRIAPKWLEANVEGMTAKVVGVPTREDIDLEIAEHLIIELYSK
>gi|260685473|ref|YP_003216606.1| DNA-directed RNA polymerase alpha chain [Clostridium difficile R20291]
MIEIEKPKVDIVELSEDYRYGKFVIEPLERGYGITIGNALRRILLSSLPGVAVNAIKIDGVLHEFSTIPG
VKEDVTEIILTLKELSATIDGEGSRTLKIEAQGPCSITGADIICPPDVEILSKDLAIATLDDNAKLNMEI
FVDKGRGYVSAEENKTENVPIGVLPVDSIYTPVEKVSYHVENTRVGQKTDYDKLVLEVWTNGSINPQEGI
SLAAKVLVEHLNLFIDLTEHVSSVEIMVEKEEDQKEKVLEMTIEELDLSVRSYNCLKRAGINTVEELANK
SEDDMMKVRNLGKKSLEEVIQKLEELGLGLKPSEE
>gi|260685474|ref|YP_003216607.1| 50S ribosomal protein L17 [Clostridium difficile R20291]
MAKYRKLGRETAHRNLMLRNLVTCLLRSGRIETTVTRAKETRRMAEKMITLAKRGDLHARRQVLAYVMDE
TVVNNLFTDLAPKYAERNGGYTRIIKIGPRKGDAAEMAFIELV
>gi|260685475|ref|YP_003216608.1| ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MDNIVKVNNISFEYITDEAKLKAIDNLSLDVKKGEFVAIIGHNGSGKSTLSKNLNAILMPTEGNILIDDM
DTKEEERLWDIRQTAGMVFQNPDNQIVATIVEEDVAFGPENLGIEPKEIRRIVEESLKSVGMYDLRDRQP
HLLSGGQKQRVAIAGIIAMRPKCIIFDEATAMLDPSGRKEVMKTIKRLNKEENITVIHITHFMEEAVEAD
RVVVMEKGKKILEGTPREVFSKIKMLKEIGLDVPCMTELSSLLIEEGINISSDILTVDEMVMELCQL
>gi|260685476|ref|YP_003216609.1| ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MPFASKALDDISFEIKDRDFVGLIGHTGSGKSTLIQHLNGLLKPSSGEIFINDFNITDKNLNLTEIRKRV
GVVFQYPEYQLFEETIDKDIAFGPSNLGLEESEIHNRVKASMEAVGLDYEGFKDKSPFELSGGQKRRVAI
AGVIAMNPEVLILDEPTAGLDPGGRDEIFNLIKDLHEKKNMTIILSSHSMDDMAKLAKTLIVMNHGSVEF
MGTPREVFKSNASKLKDIGLDIPQVLELALKLREKGFDISEDILTLEEAKQEILKVVRGRGLC
>gi|260685477|ref|YP_003216610.1| ABC transporter, permease protein [Clostridium difficile R20291]
MVSIFVVNKFWPYIVVLLCLLAMIKLANIPVKYIVKGVKPLKWIILFTFLINIFFLPGDEIWSFGFLAIT
KQGLRQAIFMAIRLIFLVVGTSLLTLTTSPIELTDGIERLLNPFKKIGLPVHELAMMMTIALRFIPTLLD
ETDKIMKAQMSRGADFESKNLINRAKNLVPLLVPLFVSAFRRADELAMAMEARCYRGGHNRTKMRESVIS
RRDYMACVFQVVYLGAIIATRFIAI
>gi|260685478|ref|YP_003216611.1| tRNA pseudouridine synthase 1 [Clostridium difficile R20291]
MRNIKIKIQYNGKNYCGWQKQPDSLGIQGTIERAIYDITKEETSLIGSGRTDSGVHAIGQIANFKINSGI
SIESIPMALNAKLPKDISVIEACEVNDDFHSRYSAKGKTYKYLVYNSKFRNPILSEISYQVKYELDFDKM
CSEAKSLLGTHDFKGFMSSGSSVKDTVRTIYDIDISKKDDLITFEISGNGFLYNMVRIIVGTLVDMGRGR
INEPFLDIIQSKTRSRCGHTAPAQGLFLKKVHY
>gi|260685479|ref|YP_003216612.1| 50S ribosomal protein L13 (pseudogene) [Clostridium difficile R20291]
MKSYIAKPADVQRKWYLVDAEGKTLGRLATEIATVLRGKHKPTFTPHVDGGDFVVVVNAEKIVLSGKKLD
QKYYRYHTGYVGGLKEISYRDMMDKKPEEVISHAVAVCYLKIN
>gi|260685480|ref|YP_003216613.1| 30S ribosomal protein S9 [Clostridium difficile R20291]
MANVQYYGTGRRKSSVARVRLVAGEGNILVNGRALENYFNYETLIRDVKQPLVLTGNENKYDVIVKVEGG
GFTGQAGAIRHGISRALLKADLDLRPALKKEGFLTRDARMKERKKYGLKAARRAPQFSKR
>gi|260685481|ref|YP_003216614.1| germination-specific N-acetylmuramoyl-L-alanine amidase [Clostridium difficile R20291]
MEYYSVFISIHIQGDVVRKYIKHIIFSFAMICLVVVSIFEIKNISEDVIKYMPVTNKTIILDAGHGGIDP
GALNKDKSTSEKDINLAITLKLRELIESSGGLVILTREDDSSLYKEENNKTTRQKYNENLKNRKEIISNS
NANMFVSIHLNAFEQSKYYGAQTFYPKDKQDSKELSKCIQEELKRVVDKTNNREVKPRDDIYLLKENNIP
SVLIECGFLSNEKECKLLTDETYQEKIAWAIYIGIQKYLS
>gi|260685482|ref|YP_003216615.1| aspartate aminotransferase [Clostridium difficile R20291]
MLSKRLNFITPSYTIGISSKVKEMESNGVKVINLSIGEPDFNVPNNAKSYGIDSLNKDYTKYDLVPGLKI
LREEICKKLIEENNCNYSIDEIVVSSGAKNSITNTLLALTDEGDEVLLPKPYWVSYPEMIKLVNAVPVFI
DTKKENGFKLTKEELEKSITDKTKILVINNPSNPTGSVYTKDELIEIVDVCIQNKIYILADEIYEKICYT
GEFTSIASLSEEAKDITITINGFSKSAAMTGLRLGYTASNKTIAKAMSSIQGHLISHPSLTAQYIAYGAL
KDCSIDIDNMVKTYKSRRDLIKSKLDSIDNVGYVNPNGAFYIFIDLSKVSEKFEYKDSFSIEFCNQFLEE
YNVAVVPGIAFGMDKYIRISYACSENTFLSGLDKLKEFVYKIMA
>gi|260685483|ref|YP_003216616.1| anaerobic ribonucleoside-triphosphate reductase [Clostridium difficile R20291]
MVEFVKKRDGRVIPFNEDRITRAIFLAATNVAEREGIVPDYKLSEQLTQEVIKFLNHKYSESVPSVEDIQ
DSVVKVLIETGHAKTSEEYIIYRTERSRIRNSKTRLMKAIEEITFEDAEDADIKRENANINGNTAMGTML
QYGSTVSKEFCKTHILKPEHSFAHDNGDIHIHDMDFLNMGTLTCCQIDVKKLFNGGFSTGHGFLREPQDI
ISYGALAAIAIQSNQNDQHGGQSIPFFDYGLAEGVYKTFKKFYIGNLAKALKLFKGIENNDVIKNIVYNT
EKETNQKVGLKRDELYLNLEKEKLIQTFDIDDELVNKMQNFAFEESYRETDKKTYQSMEAFIHNLNTMHS
RAGAQVPFSSVNFGTDTSEEGRMVTKNLLLSQERGLGNGETPIFPILIFKVKEGINLNPEDPNYDLFKLS
CRVSAKRLFPNFSFLDAPFNAKYYKKGEPDTEATYMGCRTRVLSNVCGSETVSGRGNISFTTVNLPRLGI
KHGIINNEKANLDGFFEELDEKINLIIEQLLERFEVQGNKKMKNFPFLMGQGVWKGSDDLVPEDTLKEVI
KQGTLTIGFIGLAECLIALIGKHHGESKEAQELGLKIVSHMRHKMDEATDKYKLNFSLMGTPAEGLSGRF
TKIDKKVYGEIKGITDKEYYTNSFHVPVYYNISAYDKIEIEAPYHELTNAGHITYVELDGDPSDNLEAFE
TVIKAMKDLGIGYGSINHPVDRDPICGFSGVITSNICPVCGRNEDESDIKFERIRRITGYLVGTVDRFNN
AKKAEVRDRVKHR
>gi|260685484|ref|YP_003216617.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Clostridium difficile R20291]
MKIRMSSTISYDSIVDGPGLRMVIWTQGCIHNCKECHNPQTHDLCGGFYMDTEEIINKVKSLKLQKGITL
SGGEPFLQPEPLEEIAREAKINGLDVWSYTGFTFEQLLDKKNRAYFKNLNLLKQIDILVDGKFIAEKKDI
SLKFRGSSNQRIIDVQKSLKYKKVFLVEQYMKDDLSIAE
>gi|260685485|ref|YP_003216618.1| hypothetical protein CDR20291_0108 [Clostridium difficile R20291]
MLDINSFLNGFFNIILRMSIYDLIDISIVAYIFYKIFMFIKDTRAEQVFKGIIFLLLATQLSNTFKLHTV
YWISLKALDYGVIAALIIFQPEFRAGLEHIGRAKFNLFGKNVNTSEETLNRNIEEIVEALYSLSRQKIGA
LIIMERETRISDIINTGTIIDAEISRQLLINIFIPNTPLHDGAVVIRDSKVKAAACFLPLTESKDLSKDL
GTRHRAGIGVSEVSDCITLIVSEETGGVSIAKAGKLYRDISRERMMNILRSNLKTNTETRSFFKGGIFK
>gi|260685486|ref|YP_003216619.1| hypothetical protein CDR20291_0109 [Clostridium difficile R20291]
MYVMAVVDPEETKGFEDIPVSISNMSDLKDKNLVIYPDEKLTADVYIKGSLSKVQSVKKEDIHVYGTIED
PIQGQKEVYLKANIPQGVTLEFKHDVLVVNLEKNIKEKRDIKVEVSGNSKRNINKIELSKEFVDVSGPRT
LVKEVKSVRANLDVGNETDDFSKKLQLIPLNSDGTKVEGVTLSSSFVTAKIELLKEKIVPIRVSLNDNKD
NDVLKNYKLSKEQVTIKGKKEDIDKISYIKTKPIDLADLANGEEKEVSLEIPEGITLEDSSITIKLNDTK
QLSAEFLYNAGDIELRNIPTNIDNPNVISDVDIKVVVESTEDLSKLNKKDISLYIDLSQGPEEDSKYKIK
YETTYQFKKINIEPNIVEVE
>gi|260685487|ref|YP_003216620.1| hypothetical protein CDR20291_0110 [Clostridium difficile R20291]
MNKYFEYLVVTRCDKKTYKIKFVNFMFLLHLVYFSYIIK
>gi|260685488|ref|YP_003216621.1| phosphate butyryltransferase [Clostridium difficile R20291]
MRWKCMRSFEEVIKFAKERGPKTISVACCQDKEVLMAVEMARKEKIANAILVGDIEKTKEIAKSIDMDIE
NYELIDIKDLAEASLKSVELVSQGKADMVMKGLVDTSIILKAVLNKEVGLRTGNVLSHVAVFDVEGYDRL
FFVTDAAMNLAPDTNTKKQIIENACTVAHSLDISEPKVAAICAKEKVNPKMKDTVEAKELEEMYERGEIK
GCMVGGPFAIDNAVSLEAAKHKGINHPVAGRADILLAPDIEGGNILYKALVFFSKSKNAGVIVGAKAPII
LTSRADSEETKLNSIALGVLMAAKA
>gi|260685489|ref|YP_003216622.1| butyrate kinase [Clostridium difficile R20291]
MSKIFKILTINPGSTSTKIAVFDNEDLVFEKTLRHSSEEIGKYEKVSDQFEFRKQVIEEALKEGGVKTSE
LDAVVGRGGLLKPIKGGTYSVSAAMIEDLKVGVLGEHASNLGGIIAKQIGEEVNVPSYIVDPVVVDELED
VARISGMPEISRASVVHALNQKAIARRYAREINKKYEDINLIVAHMGGGVSVGAHKNGKIVDVANALDGE
GPFSPERSGGLPVGALVKMCFSGKYTQDEIKKKIKGNGGLVAYLNTNDAREVEERIEAGDEKAKLVYEAM
AYQISKEIGASAAVLKGDVKAILLTGGIAYSKMFTEMIADRVKFIADVKVYPGEDEMIALAQGGLRVLTG
EEEAQVYDN
>gi|260685490|ref|YP_003216623.1| putative ATP/GTP-binding protein [Clostridium difficile R20291]
MNYVVKLRDMVSGKVAIADLDVVNVYFRTREKKELMKSLGIQPIDSSINAPTLDLPAVSAEVMSPMVDHS
YNSVIDLGGDNVGARVIGRFSHLLKEGDYDMLFVINANREKTQTSEEVIQYIKEIEKSSKLKVTGLINNT
HLIRFTTIDDVLRGQKVAKEVSEKCNIPIRYVACLENLVEQLPKDLEGEIFPIKLYMREDWM
>gi|260685491|ref|YP_003216624.1| ferredoxin [Clostridium difficile R20291]
MAKGKVSFNQERCKGCGLCVEACPVKIIQLDSNVINKKGYNPATVFEMEKCIGCASCATMCPDVVITVER
D
>gi|260685492|ref|YP_003216625.1| putative oxidoreductase, thiamine diP-binding subunit [Clostridium difficile R20291]
MAKILMKGNEAFGKAAIEAGCKYFFGYPITPQSELPEYLSRELPKIGGAFVQAESEVSAINMVYGGAGAG
ARVMTSSSSPGVALKQEGITYAVGAEVPCVVLNVMRGGPGLGSIQPSQADYFMSTRGGGNGDYRTPVFAP
ATVQEAVDMIMEAFDVADYYRSPVMVVADGMIGQMMEPVEFRAPEKKRELPPKDWATVGTKGKRKPNVIN
SLYLEPEVLEDHCWHLQEKFDAMEKNEVQYEMYKTEDAEFVFAAYGTTSRVVKSAIDILREEGIKAGLIR
PKVLWPFPFEAFNQIPNARNILTVEMSMGQMVEDVKMAVEGKLPVYFHGRPGGMTPTPAEIVEKAKKIIA
GELVAGGAR
>gi|260685493|ref|YP_003216626.1| putative subunit of oxidoreductase [Clostridium difficile R20291]
MAVVFKKTEGLQDTQTHYCPGCTHGIIHRLVGEVLEELGVLGDAVGVVPVGCSVLGYKYFNCDTQEAAHG
RAPAAATGIKRVHPENTVFTYQGDGDLASIGTAEIVHAAARGEKITTIFVNNTTYGMTGGQMAPTTLVGQ
RATTAQSGRNAETQGYPIRVSEMLATLTGAVFVERVAVDTPAHVRQAKKAIKKAFQVQQAGLGFGIVEVL
STCPTNWGLAPNDALQWLRDNMIPYYPLGNFKNVEVEEVK
>gi|260685494|ref|YP_003216627.1| putative subunit of oxidoreductase [Clostridium difficile R20291]
MSTARVICAGFGGQGVMSMGQLLTYAGMLEGKEVSWLPSYGPEMRGGTANCAVTVSNEPVGSPLITDDAT
AAILLNIPAFEKFKDDVIPGGKIIVNSSLIKEKVDRTDVDVYYIPANELAAELGNDKVANMIMLGAYLKV
SDTVDIESVLEAFKKVFGPRKEKFVPLNREALQKGMDATCSKATN
>gi|260685495|ref|YP_003216628.1| phosphoglucomutase/phosphomannomutase mutase [Clostridium difficile R20291]
MNYKNIIQITSFSIMKGESLVRKYFGTDGVRGVANTELTCDLAYKLGRAGGFVLAQGDHRVKVVVGKDTR
ISGDMLEASLIAGLMSVGCDVITVGIIPTPAVAYLTRKYGADCGVVISASHNPVEYNGIKFFNKNGYKLD
DEIELKIEEYIDDIDKIDCLPIGENVGRKLHEHCAQRDYVDYLKSIISTDFKGLKVVLDCANGASYKVAP
IVFDELGASVISINSSPDGNNINYKCGSTHPEQLQRAVLEHNADLGLAYDGDADRLIAVNEKGQIVDGDH
IMILSALNLKKNNKLAQDTLVVTVMSNIGLTIAAKENGINLSTTAVGDRYVLEDMVKNGYNLGGEQSGHM
IFLDYNTTGDGVLSSLILANIILQEKKPLSEIASIMSQYPQVLVNATIKNENKNKYMEYPEIKTEIERIE
SILNGNGRVLIRPSGTEPLVRVMLEGKEEGQIKELATNLANLIQEKLS
>gi|260685496|ref|YP_003216629.1| glucosamine--fructose-6-phosphate aminotransferase [isomerizing] [Clostridium difficile R20291]
MCGIVGYLGSRKAAEVIVEGLSKLEYRGYDSAGVAVNSSNEEELNIRKFKGRLSVLAEDLEKNPIDGNLG
IGHTRWATHGEPSDVNSHPHFNQAKTIAVVHNGIIENYMEIKEELISEGVKFESQTDTEVIAHLVDKYYE
GNLLDAVYKTISKLRGAYALGVICKEHGNELVAVRKDSPLVVGVGEGENFIASDIPALLKYTRDVYFLEN
GEVVHLKDENVTVYDSNRNLVEKEVFHVTWDVEAASKGGYDYFMSKEIHEQPTGVRETLERRLDDNGNII
LDSINISKEDLEKINKVYIVACGTAYNAGLLGKYAIEKFVNIPVITDIASEFRYSDPFVDENSLVILVSQ
SGETADTLAVLRDSKAKGARILSITNVVGSSIARESDDVFYTWAGPEVAVASTKAYTTQITSLYMIALDF
AIKKGTITREFYDSMISKMKEIPSKIQEILDNEEYIKEVAKTVVSSEHAFYLGRGIDYSLAMEGSLKLKE
ISYIHAEAFAAGELKHGTIALIEKGTPVIAIATQEKLFEKMVSNMEEVRARGAYVVAIAQSHNKDVEKAA
DKIIYIPNSDDILSPILAVVPMQLLAYHVSVLRGCDVDKPRNLAKSVTVE
>gi|260685497|ref|YP_003216630.1| putative thiosulfate sulfurtransferase [Clostridium difficile R20291]
MTNDFKKEKKEDYFVNLKAISTEVLQEKMQDNAWVIVDTRLNDAYNGWKLDGVKRGGHIKRAVDFSANWL
NVYSDRKDEVLEQALKTKRIDLDKNIVLYDANGKDALVVADYLSKKGYKYLYKYDIKQWADDENLPMERY
KNYQMIVPAFIIKDILDGKIPETFEDSKNIKMIEASWGEESYTKGHIPTSVHVNTDIIEPPPTWMLDNDD
NLTKFALDYGLTKDDTVIVSSITPMASYRLAVILRYIGVKDVRVLNGGTNSWLSAGYELEFISNPKHSCT
NFGADIPVNSQLVVTTSELRQKLKEKNKFILVDNRTWDEHIGKVSGYTYYDKKGRIPGALYGHSGSNSVS
LEEYRNIDNTMRNKSEILEMWDKENIDVNKQLIFMCGSGWRAAEVLTYANVIGVENTSLYSDGWMGWSLD
NSNLIEVGEHK
>gi|260685498|ref|YP_003216631.1| hypothetical protein CDR20291_0121 [Clostridium difficile R20291]
MKKVKLAISFFILMIIGMTISYADTSINTRYNRLSKALEISEANFKFYNVKINSVINHNLSNKEFHNIFI
EIINNLKLDKKGINWNQKGSGDKIQLCATIKGSDKEISIKGINKNNKESYIVVDILDNKVYKHKEVIYSN
VENVLNKYSSQVDVSACIVGEYTKRLQNNKYDDILQKILYNMSAKQIDEVKDVNFLSITAYSKVLNDYEL
EYLGEKINLNIGIKYNEDDGKTLIYIATPIIKLDY
>gi|260685499|ref|YP_003216632.1| UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 [Clostridium difficile R20291]
MRRSKNMAKIIVKKSNPLKGSVKIDGAKNAVLPIIAATLLANGKSTLNGVPNLRDVHVISDLLRHVGAEV
EYKENTLTVDASNIKTCEAPYELVRKMRASFLVMGPLLARFNSTKISMPGGCAIGTRPIDLHLKGFKALG
AKIEMDHGFVEAATEKLVGNKLYLDFPSVGATENIMMAASLAEGTTIIENAAEEPEIVDLANFLNEMGAD
VKGAGTNTIKIKGVKELKGAEHNVIPDRIEAATYMVAAAMTKGDITVENVLMEHLKPVVAKLREAGCEIT
EMDNSVRVVGPKVLKPIDIKTLPHPGFPTDVQAQFMAMLTVANGTGVVIETVFENRFMHVAEFNRMGANI
KIDGRSAVVNGVDELHGAAVNATDLRAGAALILCGLIAEGETQIGEIYHIQRGYVDIDKKITALGGQIEI
VED
>gi|260685500|ref|YP_003216633.1| stage II sporulation protein D [Clostridium difficile R20291]
MKNPLVVLLGFVTCSVLVPSLITLVSYKNVELTEKPESPVSINKTIKKSDIEDKGNKEEKSTVSYETVNK
KAPIINVYNHITGKTEKMDMENYLCGVLAGEMSSEFDIEALKAQSVAARTYVVYKQEHGKSSKHKNAVVC
TDYKHCQEYKSYDTLKKLNGEEWIKNKYSKIQEAVRGTKGQIITYNDKAILPLYFSTSSGKTENSEEVFS
AKYPYLKSVESPYDKYSPKFASTLKISNTDFVKSLRRAYSTIVIDVNNLSKQVSITKRSDAGTVEKIKLG
NKELTGKDIRTVFKLNSANFDIKFGEGYIDFVVKGYGHGVGMSQWGAEGMAEEGYKYYDILSHYYTDTKI
KDIY
>gi|260685501|ref|YP_003216634.1| putative cell wall endopeptidase [Clostridium difficile R20291]
MKKKLLEKDGFYLSLFVCVCLLAVGGVWFTNNNVDKLASNKGIMENANKDSEEEIHLIEKDKKDAIPTAT
DSKQNLEKAKSKEENKSSTTKLNYIGDKVIRGYSEKEPSYSKTLDVWETHKGVDISCTKGKEVKSLLNGI
VVDVFNDEEYGQSVKIKSDNNIVVVYSNLDKNVSVKKEQKVTEGQSLGTVGSTSQIESEEGIHVHLEAYS
GEKSIDPMSLIK
>gi|260685502|ref|YP_003216635.1| stage III sporulation protein D [Clostridium difficile R20291]
MRSHIEERAIVVAKYILEKNTTVRQTAKTFGVSKSTIHKDVTERLKEINPSLAKEVKNVLDKNKSERHIR
GGLATKLKYEKEHKKM
>gi|260685503|ref|YP_003216636.1| rod shape-determining protein [Clostridium difficile R20291]
MAGADIGIDLGTANVLVYVSGKGIVLEEPSVVAIDKRTDSVLAVGEEAKKMIGRTPGNIVAIRPLRDGVI
SDYDVTEKMLKSFIDKIVDKKGFGRFFMPRIMVCVPTGVTEVEKRAVEDATRQAGAREVYIIEEPIAAAI
GAGVDISQPNGNMIIDIGGGTVDIAVISLGGAVVSESIKVGGDRFDDAIVKYMKKQHNLLIGERTAEKIK
FEIGSAFKREEEKYMKITGRNLITGLPSSITINSTEMLEALRECVEQIVVATHAVLEKTPPELAADIGDV
GIIMTGGGSLLYGLDKIIEQRTGITVTIADEPLSCVAKGTGIALGSIDLLETGGSFKRK
>gi|260685504|ref|YP_003216637.1| (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase [Clostridium difficile R20291]
MLNIDEIKKLIPHRYPFLLVDKITELEVGKRAVGIKNVTVNEPFFQGHFPEYPLMPGVLIVEALAQVCGV
AMMSVEENKGKLGVFAGIDKVRIKREVRPGDTLTMEIEMTTLRKNIAKADAKAYVGEELVCKGELMFALV
EK
>gi|260685505|ref|YP_003216638.1| hypothetical protein CDR20291_0128 [Clostridium difficile R20291]
MFLLYLAKVNYSDDDVIQMLSSVLKTIINENTIVVCIGTDRAIGDTLGPLVGTILKNSNFKYPVYGTLDN
PIHALNIYESLDTIKNTHIQGNFLAIDACLGSQSNIGNIQIREGPILPGKGVGKKLPQIGNYSIVGIVDK
IDENNKLSFNNIRLSFILDLAETIALALLVST
>gi|260685506|ref|YP_003216639.1| S-adenosylmethionine synthetase [Clostridium difficile R20291]
MARHLFTSESVTEGHPDKICDQISDSILDALLEKDPQSRVACETTVTTGLVLVAGEISTSAYVDIPKLVR
ETVREIGYTRAKYGFDCDTCAVITSIDEQSGDIAMGVDEGLESKTGEEIEEEIEKVGAGDQGIMFGFACN
ETPELMPLPISLAHKLSRRLTEVRKTGLVDYLRPDGKTQVTVEYEGSKAVRVHTVLISAQHCETVSNDKI
REDLINHVIKEVIPAELLDEETKIYINPTGRFVIGGPQGDTGLTGRKIIIDTYGGYSRHGGGAFSGKDPT
KVDRSAAYAARYVAKNIVAAGLADKCEIELAYAIGIARPLSIFIDTFGTGKVSEEKLVELVNKHFDLRPG
AIIRDLDLRKPLYKKVAAYGHFGRTDIDLPWERTDKVEQLRKDALGE
>gi|260685507|ref|YP_003216640.1| hypothetical protein CDR20291_0130 [Clostridium difficile R20291]
MSGKVNIKTVISFAGAYVATVIGSGFATGQEILQFFTFYGYAGIIGGIISMVLFSWFGAEVIDKGRELKL
KEPIKIYQVYCGKYLGTFFEWFGPLFLFGTLVIMIAGAGATLSEYYGLNPYVGRIGMAIVSLITVSLGLT
RLSKILGNIGPIIIIFTLLVGAISLFSNIDALSNAGNMVDSLNIKTATSNGYFSGVLYTCYNVIIVITFL
TGMGASAVNKKDAVWGGIVGGVALMAAAIMMNLALLSNIGNIYTKEIPALYLADKISPIIGILFSVVLLL
GIYTTAVPLLWSVTNRFVEDDHPKFKIITIVVSILACIGGLLPFDKLVGTLYPYTGYMGILILLCMLYRR
ITKTEGYKENKSEIS
>gi|260685508|ref|YP_003216641.1| putative DNA-binding protein [Clostridium difficile R20291]
MEKLEGMISEIVFKNEDNGYTIAHLVNENDEIVVVGCMPTLAIGESIEVEGKWVNHKIYGTQFEVNSFMP
VTPSSLEGIYVYLSSGMIHGIGEKMAKRIIDKFGVDTLEVIQNSPEKLQEVEGIGSKKVKQIVKSYEEDR
ELRNIIIQLSPFGITPNYCLKIYKKYKSSAIEVINKNPYQLAEDIRGIGFKVADSIASKIGIDKNSKDRI
CQGILYTLNKSLSNGHTYLPEHVLIQDSEKLLELNGEIIKECVMMLVYNQKIHIEKVNNENLIYLMPYYL
AENGVCSQIVKLSQYEFEDLKIDIDNEINVLEEDKKIKLAEKQILAVKESVNSGVLIITGGPGTGKTTTI
NAIIDIFENNGKSVTLAAPTGRAAKRMSETSNKEAKTIHRLLEMGFSTDDDLTFFKDEEDPINSDVIIVD
EVSMVDIILMYNLLRAIKLGTRVILVGDSDQLPSVGAGNVLKDMINSNIINVVKLNEIFRQAQESMIIVN
AHKINNGEPLYLNTKGKDFFFIRKSTNEEILNEIIGLVNERLPKFYKVDKLKDIQVLSSMRKGELGVTNL
NIELQKYLNKKEKFKVEESFSKRLFRVGDKVMQVKNNYTKKWETEDQKESGEGIYNGDIGYVYHIDKDKK
TIYILFDQTKIVSYLYDELDEIDHSFCTTIHKSQGSEFPVVVLPIAWAPPMLLSRNLLYTAVTRAKKLVV
LVGDVKYLEYMIKNNRVNQRYSNLGYKLNKFKQEGLLIE
>gi|260685509|ref|YP_003216642.1| putative phosphoribosyl transferase (putative competence protein) [Clostridium difficile R20291]
MKICNDNFIKNFKNMINKCLDFIYPENISCIICDKSIKKTNTYSICKSCFKEMNFIQDGCMKCGKPIIRH
SIEKEFIEECSYCFNKDFYFDKSISCIEYNDVTKKMVLGLKYNQKTFMAKYIAQIMKEKLYLENIKFDYI
LFVPLHKKRLNKRGFNQAQKIAFNLSKIVNIPLLDCISRKKYTRMLYKLNKKERKEELKNVFVVKENVKL
INNKNILLIDDIFTTGLTTNEISKLLKLSGANKVFVLTLLTKANDNYIME
>gi|260685510|ref|YP_003216643.1| putative transcription antiterminator [Clostridium difficile R20291]
MICLNKRQENLLTTLLLKEEFINVNKIANDFECSERTIRNDCKYIDEWLSTFCNAYIKRKPNIGIKFSGD
GTDKILVNQKLRGEVKRVNSELHKQVEILNLLLCNNKKVTLNDLSNKLYINKNIVREEISKLSVALNNYN
LNVSTKKGSGIYIEGDEKDIRIMLVSFLFKYIDKYRLNIDEIEYFHIVDIIIVKNIMLTIEEDMDIRLTD
ISFKQLMLFLLINIIRIRLGNSLKVSNTKKELKLKMLILDIEDELKSNLSIVLNYEEKLFIESLILGMNK
QINSNNIKKSLYLNEELASYTKKIINLVSEESGINFNNDILLYEQLICHLNVTMHQMKSNVYLENPLLDN
IKTKFCFLFTVISSSIEIELKGKQITEDEIGYLTLHFQTSLERKYSKRESNKKASIVCPFSFGVSMLLKV
KIEKRFDNIKIIETLREEDLKRDNFNKTIDFIIAFQEYENIQKPIFITTPLFTDEDENKLKEFTNKIKEK
DTSYKLMNRLMMSDYLIRELEHDDIYEAITYLTNLLIEKHYAEKEYLQSIITREKSYPTNVGKGILFPHG
DMKYIKQSVLCFARLKTPIKIRNGKDIKIILLLAYKKDDDRKVFRELFKEISNLTEDENMLDILSKCDIE
KVKDILI
>gi|260685511|ref|YP_003216644.1| PTS system, IIa component [Clostridium difficile R20291]
MEEIVLKIIIHAGNAKSMLYEALDYAKENDFKKADELIENANEEILKAHKVQTELIQKEAGGDKSDISIL
LIHSQDHLMTCMSERNLIKEMIMLRKEIQKLK
>gi|260685512|ref|YP_003216645.1| PTS system, IIb component [Clostridium difficile R20291]
MKRKVYLFCSFGMSTSLLADKMQKVADEHNLPIEVEAFPIAEIDKIVEEKNPDCILLGPQVKYMLKELKP
KFEAQGKLIDIINEVDYGTMNGEKVLKLAIKLIKSKQA
>gi|260685513|ref|YP_003216646.1| PTS system, IIc component [Clostridium difficile R20291]
MNRLERILMPLAEKIGKNKLLIAIRDGFLISSPLLIIGSLFLLVANFPIKGWNEFVGQIFGPDWAVKLQQ
PTVATFEVMTLLAVLGIGYSYAKQIDVDPIASAAVAIVAFFIVTPFVIPYTPEGTESVYMVTGIPLGWMG
SKGMFVGMITAITSVKLFAAVVKKGWTLKMPDGVPPTVSKSFAALIPSAIVMVVFFLVKIAFEATPYGSI
HEFIFKFLQMPLLKLGNSLGAMAIAYIFLHLFWFFGINGSSVVGAVYNPILKILSAENLAAFQAGSKIPN
IITGQFQDMFATFGGAGSTLSLVIAMLLICKSKRIKSMGKLSILPGIFGINEPLIFGLPIMLNPILLIPF
AIVPTINIIIAYFCMSAGLVPLTNGVQLPWTTPIIFSGFLTTGWQGAVLQLVLLILGIFMYIPFIKMLDK
QYLREENETVEEEDDDISFDDLVL
>gi|260685514|ref|YP_003216647.1| hypothetical protein CDR20291_0137 [Clostridium difficile R20291]
MKKIVMILDQIQAGAGGKEKSNIPPAGKSSPLGPGVMMEQFLNESKVIATLFCGDEFFVNNEKEVTSKMI
AMVKKLNPDVVICGPSFNYENFSKMSAILSKNINDKTDIPAFAAMSEENIDVINEYKNDICIVKTPKKGG
IGLNDSLNNICKLAKAIANKEDITLMKEEFCY
>gi|260685515|ref|YP_003216648.1| glycosylasparaginase [Clostridium difficile R20291]
MWGMIATWRMALEGITEASEHLEKGMEAGDAVELAVRRVEDYPFYKSVGYGGLPNENCEVELDAAFMDGN
TLDIGAVAGIRDYSNPVSIARKLSYEKVNNFLVGIGAEDYAHKNGFERKNMLTDRAKLHYKKRKKETLDK
GLSPYAGHDTVGMISLDKTGKMCAATSTSGLFMKKRGRIGDSALSGSGFYVDSSIGGATATGLGEDLMKG
CISYEIVRLMKEGKHPQEACDIAVNELDKQLIKRRGKAGDLSLVAMNNKGEWGVATNIVDFTFSVVTKEE
SPAVYISNRVDGKTIHKVISNEWMEAYEARIKAPIEVSE
>gi|260685516|ref|YP_003216649.1| putative peptidase [Clostridium difficile R20291]
MNIISNKIDELKEDLLSDIIDIVKIPSVKGESENGFPFGEKVGEALNKALEISKKLGFKVRNLDNYIGYA
EHGDSDDYVCVIGHVDVVHEGDGWKHQPYKGEETNGRIYGRGVLDNKGPIMSALYGLYAIKELNLKLDKR
VRIIFGTNEESGFEDIPYYLEKEKTPIMGFTPDCKYPVVYGEKGMAKIRIKSKINYEEDVYLGFIENMSE
NVLVTYKELNIENSNTILDIKVKYDFSYKLKDVLDEIKASFPNSIDIEVISNFNPVYFDKESNLVKKLQL
AYERVTSLDGTPVTTNGGTYAKVMPNIVPFGPSFPGQKGIAHNPDEYMDIEDIILNAKIFANAIYELAKE
>gi|260685517|ref|YP_003216650.1| putative copper homeostasis protein [Clostridium difficile R20291]
MLEIIGMSVEDAKIIEDCGADRIELVSALTEGGLTPSFGLIESVVNSVKIPVNVMIRHHAKSFVYSKEDI
SIMQKDIGVVKEIGANGVVFGVLDKNNNIDEKNLNVLLKCCDNLDVTFHRAIDESNTIDSVKILKDYDKI
TNILTSGGKGSIVDNIQMIKNMMLSSNHIKILLGGGLNFNNIEKIKELTKASNFHFGTAIRINNSPFEDI
DRQKLKQLVNIISR
>gi|260685518|ref|YP_003216651.1| putative RNA-binding protein [Clostridium difficile R20291]
MNIIISGKQIELTDAIKNKIETKLSKLDNYIHPDTDVKVTVSARKARQKIEVTIATVNGPIIRAEDMQEN
LYTAIDVVYDKLSKQLKKYKKRLQDKHKDNKSIRFQDSEINLADEQEDYGDENQELVIQRRKKFSVKPMS
EEEAVLQMELIGHDFYMFKNIDSDEIAVVYKRNNGGYGIIEHE
>gi|260685519|ref|YP_003216652.1| preprotein translocase SecA subunit [Clostridium difficile R20291]
MSFMDNLFNMADKKELKKFNKTVDIIDSLEPKFESMADSELKNMTNIFKERLANGESIDDILPEAFAVVR
EVSKRVLGLRHYRVQMIGGIVLHQGRIAEMKTGEGKTLVATAPVYLNALTGKGVHVVTVNDYLAKRDRDQ
MAKIYEFLGMSVGVIIHGQNPKVRKEQYDCDITYGTNNEYGFDYLKDNMVIHKEQRVQRGLNYAIVDEVD
SILIDEARTPLIISGPGDKSTHLYSDANTFVLTLKPDDYELEEKDKAVSLTASGIQKAEVYFNVDNITDI
SHTELYHHINQALRAHVIMKKDVDYVAKDGEIVIVDEFTGRLMFGRRYSEGLHQAIEAKEGLKIQRESKT
LATVTFQNYFRMYKKLSGMTGTAKTEEEEFKAIYKMDVFQVPTNKLMVREDLPDSVYKSEIGKFNAVAQE
IIERHKVNQPILVGTVSIEKSELLSQILKKKGIKHEVLNAKHHDKEAEIIAQAGRLGAVTIATNMAGRGT
DIVLGGNPDFLTKREMRRNGFKEEIVNRVDTPIEGIPVKGNEILFEAREEYEKLFEKFKQQTQEEQKQVV
EAGGLAIIGTERHESRRIDNQLRGRAGRQGDPGSSRFYIGLDDDLMRLFGSDRISGIVDKIGLEEDMPIE
HRILSKSIEGAQKKVEGKNFGIRKHVLQYDDVMNKQREIIYAERKRVLEGEDLQEQIQSMTHSIIEEAVT
LYTQDKGFDEEGFKEHMYNLFLPKGSIEIPEIEKLNPVEITEKVYEIAMKIYTSKEEQVGYERMREVERV
ILLQAVDNHWIDHIDAMDQLRQGIGLRAVGQQDPVIAYKMEGFDMFDEMNKHIKEDTVRYLFNITIETPV
ERKAVVDVENLSSPSDGTLPTSKTVKKDEKVGRNDLCPCGSGKKYKNCCGR
>gi|260685520|ref|YP_003216653.1| peptide chain release factor 2 [Clostridium difficile R20291]
MKNIQINEEKMNQQDFWNDNEVAQRVLQENKSLKETLEEYESLKSLLEDIEVLIEIGLEEDDDSVERDIE
KSIESMEEKLSEMKIKTLLNGEYDKNNAILSINAGTGGLDAQDWAQMLLRMYIRWSESKGYKVKLLDIIS
DPEAGIKTATILVEGTNAYGYLKSEKGVHRLVRISPFDPSGKRHTSFASIDVTPELDENIEVEINPSDLK
IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQNERSQHLNKDRAMRLLMAKLIELKELEQKEKIEDI
QGKYSQITWGSQIRSYVFQPYKLVKDHRTNAEFGNVDSVMNGNIDLFINEYLKMNKIV
>gi|260685521|ref|YP_003216654.1| putative RNA-binding protein [Clostridium difficile R20291]
MNKLDINQILKKEFNLRDEQINNTLKLIDEGNTIPFIARYRKEMTGEMSDVTLREFYEKLMYLRNLQSRK
DDVVRLIDEQGKLTDEITQNIEKAKTLQEVEDIYAPYKQKKRTRATIAKEKGLENLALSILENNLDNIEI
EAKNYLDEEKEVLSIEDALKGARDIIAELVSDDAKIRKYIRELALREGMIVSKSATDEKSVYDMYYDYNE
AVKSMAPHRVLAINRGEKESFLKVKLEINNDKVLNYIINEYVNDKNFKNKEEIVSSIEDSYKRLIFPSIE
REIRNHLTEIAQERAISVFGKNVKSLLLQPPVKDKVVMGFDPAFRTGCKIAVVDKNGKLLDYTTVYPTDP
QNDVEGAKKVLKGLIEKYDIDIISIGNGTASRESETFVSEMIKEIDSEVQYVIVSEAGASVYSASELANE
EHPDINVSIRGAISIARRLQDPLAELVKIDPKSIGVGQYQHDLNKKRLEEVLDGVVEDSVNSVGVDLNTA
SYSLLEHVAGISKAIAKNIIAYREENGDFTSRAQLKKVKRLGPQAFTQCAGFMRILEGKNPLDNTGVHPE
SYDICKKMIEIIGYSLDDVKNKNIGEIDEKIKEIGLRELSEKLEVGQVTLKDIIAEIKKPGRDPREEGIK
PILRTDVLKIEDIQEGMTLKGTIRNVVDFGAFVDIGIKNDGLVHKSEMSNSFVKDPMSIVTVGDIVDVKV
IGIDLNKKRVALSMKK
>gi|260685522|ref|YP_003216655.1| putative amidohydrolase [Clostridium difficile R20291]
MIFIKNGKINTITNGIIHGDILIDEGKIIEIGEDLIAPLDVEVIDASNKLVFPGFIDAHTHLGLWEDGIG
FEGADGNEETDPITPQLNPIDGINPMDRTFKEAFEGGITSVCTTPGSANVMGGQCIAIKTCGKRIDKMVI
KNPVASKIAFGENPKSCYGQDDKSPQTRMAIAALLRENLKKAEEYLEDIDMYESHDDEDCEKPEYDIKME
SLIPVLRREIPFKAHAHRADDMFTAIRIAKEFNLKLTLDHCTEGHLIVDELVEEGFPVIVGPSLSERSKF
ELRNLTFNTAGILSNAGLDVCIMTDHPVIPVQYLPICAGIAVKHGMKEEKAIESITINPAKTLGIEDRVG
SIEVGKDADLVIWDNSPLEIQSNVLYTIINGKVVYEKK
>gi|260685523|ref|YP_003216656.1| putative riboflavin transporter [Clostridium difficile R20291]
MQNTAKRGNMISTRTLVVMSILSAISYLLMFIQAPIPGIFPDFLKIDLSDIPAIFGGMSLGPLVGFGIVV
VKNVLQAITATTTGGIGEFANILIGGSYVMILCYSYKRSGDLKGVLIGFVLGTISMTIIGSLVNYFVMLP
LYGQLMGLDAIIGLGSAINPQVHDLFTFVIWMIAPFNVLKAVIISLVTLPLYKKMGNIIKK
>gi|260685524|ref|YP_003216657.1| hypothetical protein CDR20291_0147 [Clostridium difficile R20291]
MHLSKKIKKLFLDDKGYYFNSNWEDIHIGIYDTKLGDSLKYITNEYIENMERVKYDYRELKNIENQTDGM
CILAIRQNYKALEYVKNQTEELCLEAIKYNYKALEYVKEQTEYLCLEAIKKDCNALKYVRNKTEGLIIKA
ISHSSNIDVVSILKALETQTRRICLEAIKKDGRCLAYVREQSEELCIEAIKQNYKALKYVKNQTEKMCIE
SVRQNGMALQYVNKQTDKICIEAVKQDGRSLQFVNNKTEEICINAIRYLNKKYNIKDVLSYIDKYTEDIC
IEIVRQNGKMLMYIKNQTEKMCIEAVKENYKSLKYVKEQSERICKEALKQNHKAKEYVKIAIDDCI
>gi|260685525|ref|YP_003216658.1| putative ATP/GTP hydrolase [Clostridium difficile R20291]
MAKIYLENENKTREIGYKLGKLLKEGSVICLVGDLGAGKTTMTQSLADSLGIEDYITSPTFTIINEYEGK
IPLYHFDVYRIGSSDEMYDIGYDEYVNSNGICIIEWANLIEDILPKEYLNIELRYKDEGREMILTPKGEF
YKEIVEELIK
>gi|260685526|ref|YP_003216659.1| putative glycoprotease [Clostridium difficile R20291]
MDTSSMAASVAVVEDDNLICEFTVNNKKTHSQKLMPMIENMLSMSDLSIKDMDLLAVCIGPGSFTGLRIG
MATVKAMAHVNNIPIIAVNSLESLANNINFCDRKICCILDAQKNQVYSAKYKFENGEMIELDGVDVVEFD
ALVDEIVSTNEEFIIVGEAVYKYKDKLENIKNIKIPSPANNVSNAGSLCSLALNKYNKNIDVHTCYTINP
MYIRKSQAEVQYDEKMKRLNNGR
>gi|260685527|ref|YP_003216660.1| putative ribosomal-protein-alanine acetyltransferase [Clostridium difficile R20291]
MTTEDIDEVFEVEKNCFEDYWSKESFRKELSNEVARYIVAKLNGKIVGYVGIWLILDEGHINNVAVHSDY
RGKKIGDKLIKCIVDLCKDNNIASMTLEVRASNKIAQNLYRKYGFKMGGIRKEYYSDNKEDAIIMWNQLK
EV
>gi|260685528|ref|YP_003216661.1| putative glycoprotease [Clostridium difficile R20291]
MSDIITLAIESSCDETAASVLKNGREVLSNIISTQIETHKKFGGVVPEVASRKHVENIDIVVQEALDKAN
IGFNDIDHIAVTYGPGLVGALLVGLSYAKALAYTLNIPLVGVNHIEGHLSANYIEHKDLKPPFITLIVSG
GHTHLVEVKDYGKYEILGKTRDDASGEAFDKISRAMNLGYPGGPIIDNLAKNGNKHAIEFPRAYLEEDSY
DFSFSGLKSSVLNYLNGKRMKNEEIVVEDVAASFQEAVVEVLSNKALKAVKDKGYNIITLSGGVASNSGL
RAKITELAKDNGITVKYPPLILCTDNAAMIGCAGYYNFINGKTHDMSLNAVPNLKINQ
>gi|260685529|ref|YP_003216662.1| 4-hydroxyphenylacetate decarboxylase, catalytic subunit [Clostridium difficile R20291]
MSQSKEDKIRSILEAKNIKSNFQNKENLSEFNEKKASKRAEDLLDVYYNTLSTADMEFPYWYNREYRKSD
GDIPVVRRAKALKAAFSHMTPNIIPGEKIVMQKTRHYRGSFPMPWVSESFFVAQGEQMREEAKKLASNTA
DELTKFGSGGGNVTESFGNVVSIAGKFGMRKEEVPVLVKMAKEWVGKSVEDLGFHYEKMMPDYDLKENLM
STLICMFDSGYTLPQGREVINYFYPLNYGLDGIIEMAKECKKAVAGNASGDGLIGMDRLYFYEAVIQVIE
GLQTWILNYAKHAKYLESIETDLEAKKEYSDLVEILEHIAHKQPRTFREALQLTYTIHIASVNEDAISGM
SIGRFGQILYPWYEQDIEKGLITKEEVIELLELYRIKITCIDCFASAGVNGGVLSGNTFNTLSIGGLKED
GSTGANELEELLLEASMRCRTPQPSLTMLYDEKLPEDFLMKAAECTKLGSGYPAWVNNSNGTTFMMKQFA
DEGMTVEEARAFALGGCLETSPGCWKQLTLNGKTYSIAGGAGQSAGSGVHFIANPKILELVLMNGKDHRM
NIQVFEPHNKPLDTYEEVIEVFKDYYKQAINVLERANNIELDIWRKFDTSIINSLLKPDCLDKGQHIGNM
GYRYNATLNVETCGTVTMVNSFAALKKLVYDDKAFTIEEMKDAILNNFGFKDALEVGNYSMADQVKVDKT
GKYDAIYKACLDAPKYGNNDLYADNILKNYEVWLSKVCEEAQSLYAKKMYPCQISVSTHGPQGAATLATP
DGRLSGTTYSDGSVSAYAGTDKNGVYALFESATIWDQAVVQNSQMNLKLHPTTIKGQQGTKKLLDLTRSY
LRKGGFHIQYNVVDSETLKDAQKNPDNYRQLMVRVAGFTQYWCELGKPIQDEVIARTEYEGV
>gi|260685530|ref|YP_003216663.1| 4-hydroxyphenylacetate decarboxylase, regulatory subunit [Clostridium difficile R20291]
MRKHSDCMNFCAVDATKGICRLSKQMINLDDSACPEIKVMPKCKNCKNFVEANDEGIGKCVGLEKEDWVY
STLNAITCEGHVFNE
>gi|260685531|ref|YP_003216664.1| 4-hydroxyphenylacetate decarboxylase, activating subunit [Clostridium difficile R20291]
MQLLVKDMCLMSSQKQLEGMIFDVQSFSVHDGPGCRTTVFLNGCPLSCKWCANPESWTVRPHMMFSELSC
QYENGCTVCHGKCKNGALSFNLDNKPVIDWNICKDCESFECVNSCYYNAFKLCAKPYTVDELVQVIKRDS
NNWRSNGGVTFSGGEPLLQHEFLHEVLLKCHEVNIHTAIETSACVSNEVFNKIFKDIDFAFIDIKHMDRE
KHKEQTGVYNDLILENISNLANSDWNGRLVLRVPVISGFNDSAENISDIISFMHKNNLIEINLLPFHRLG
ESKWIQLGKEYEYSDKGDIDEEHLEELQDIFLDNGIACYVGHETAF
>gi|260685532|ref|YP_003216665.1| putative membrane-associated CAAX amino terminal protease [Clostridium difficile R20291]
MNKSWSNLIIKNKDKKVRSGWIIITVMAAFYIFEYYLSTILMEIIRKILIATGDINLKTNYFSEYANWLN
DVGLQVVFQILTDSLMIIIPIIVWRFIMKNPISEMGLHSYRIKKKEGYVGMLLGIFNCTVIFIITITIGG
GHVTSWVPKISPLTVSWILVFILVAFAEEILNRGFFMAVLRRCKNIYFIMIVPSVIFGLIHIWNPDVTFL
SVINIIIIGILFSYMFIKSSNIWMCIGYHFTWNVFQGIIYGMPVSGLQVPGIITTQITHGNLLNGGMFGI
EGGILTTFVNLLSFIFVWYYYRDSKYDFVSDKVNVTNIKN
>gi|260685533|ref|YP_003216666.1| hypothetical protein CDR20291_0156 [Clostridium difficile R20291]
MNLKLIWINILNPVFIKNEIKRKKIQIIIFFFINFGLTYSLGLLLYYNKFIDPENFASFMMILPLSSVAI
AKFYTEGLNNDMYEFYSLIILFFLIYSLLIVLKLLNLINNNEFIIINLILTFISSLSIIIYSSNKKNLYP
VKNIKLGSLLIIYFMISVIVPTSFILILQGAQPNYSGIIKFIFTPITSLTTIYIFFSEEYAWRGFLQNIF
FDKFGKKLGVIILGMCWSLWHLPLIFTLYTPEAPILGVILRSIHIVGISIFLGYLYIKTKNIWFCAIIHV
LNNSAFLITNSKESTITYHDILIVSMVVLIFYVPFLFTKEYKNNLE
>gi|260685534|ref|YP_003216667.1| putative glyoxalase [Clostridium difficile R20291]
MKFLNVLIVVEDIEKSKKFYYDILGLKVICDFGENVVLEGNISLQEKKLWLEFINKSDSEVKFNGNDAEL
YFEEDNFDTFVERLSTMKGIDYVHLAIEHRWGQRAIRFYDLDGHIIEIGETMSSVCRRFLDSGLSIDEVA
KRMDVTVEYIESVLE
>gi|260685535|ref|YP_003216668.1| putative two-component response regulator [Clostridium difficile R20291]
MINIIICEGKKSERVILNDYINTFFYNYNFEYNIKEFENGGDLLKKYPNNVDIIFMDIDLNDENGFNVSK
EIKKFDESVRIIFVSSSNKYIKKGYEIGVYRYLEKPLKYSLFKEAISSYLKECYKNEAILSIKCKCKIYF
IKVDDILYLEVLKNDLTIHTEKGIYTFKNSMKEIESNLEEHNFFRCHKSYLINLMKVNMLDIENNIVFIN
QNSIIVSRYKIKLLREKLNSCLVDVII
>gi|260685536|ref|YP_003216669.1| putative lantibiotic ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MENGKFQFFKGVRNCFNMIYLHDKRYLFISMFMAIFQGIVPSISLLVSQNIINNMQTFSKSVKEILVLLI
MYLIINIIPSIFQSFYGYYRIKFNKNFEKHIETMMLEKSLTLSLKDFEDDNTYDMINRAQSQKGFNITIL
SENLISIIRESVSTLSLIVVLSQFQLWLIIVVIVIPVLKSLYSIKLGKEQYDVSVNRTWKERKAWYIDYL
LSKGYAYKEIMVFRIGSKLINHYKKLKEDIISQDMNIAKKNFIATLLCTVLDSIVSAGIIGFIIIQGILK
KILIGDATTYIQAVQSIKDNVESIFSLFSSVIQDLFYTDLLFKFLDYNCKEDSIEHIKIFEKIGDINKIE
LINISYKYNHSSEYSLKNINLTLNKNDPIAILGKNGSGKTTLLKILLGFYDDYEGDILINGKNLKDIEKD
EYIRKVSCMFQDYIKYEATLKENVAMGDVYKSNLEEKVKSKLKETKLKPSIYEEDGLETILGTWFGKKQL
SMGEWQKVAISRTLMKDADMYIFDEPDSSLDSEAGNELLSLYKKTFENKIGIFITHHIQHAKKITNNIVV
LENGKLLESGRHDELMDKKGVYFNLFCNCK
>gi|260685537|ref|YP_003216670.1| Radical SAM-family protein [Clostridium difficile R20291]
MNQKPFIHTFKAGKSYFIYDVNTDKILKVNAAVYNYLNKIEHNLEKESDWNIEIEDEINTLINYGFLKNK
RVNKTMHPETKYIKYHIENNLSSIILQVTQNCNLRCDYCIYSGSYSNRVHTNKRMNIDVAKRSIDYLIKN
SSQLNEVSVGFYGGEPLLEFDLIKQIVEYVKVVGEGKEIYFNLTTNATLFNEEIIEFFVKNNITTMISLD
GGKEIHDKSRKFANTGEGSHDVVLKNVRYIKNKYPEYYKKNITFNTVINSENDYISIDDFISKNETLKDS
NFLASTLNNNYSDKEIVSSDEYILGKSYDRFLTLLNKLKFIKDESMSPLSRIERALLDDFRYEKNIEGRL
ELPDVWHHGGPCIPGAFRIFVTTDGEFFPCERVSESSKMGMIGNLDSGVDIEKAEKLLNIGKLYEEQCSD
CWAYSYCDICIAKIDDTKCNENEIKPHDCDRIRHSTENNMKDYCVLKSLGYQY
>gi|260685538|ref|YP_003216671.1| hypothetical protein CDR20291_0161 [Clostridium difficile R20291]
MEKVLIYPFNYNFFTILNHCNKISDIEINSLVSPSGWGLCNKEYNVNNIITKVTNDFQSELKKNSLVWFV
DSKENLDLEKFIIPKLKVALKEGKKILYTRDDLNKISRYISHYEFKKINEWNLEKYEIRDIEGISQINTP
IIFICGLYGGLDTFDVNIRIGEELRKRGFSILQFGPKKESYLFKMIPIPEFMFDDSISSKTKIINFNHFI
KDKEVEAKPDLIIIEVPGELFPFSRKMVGNFGIRAFEISNAVINDCGILCIPSSIYDREYCEELKYFIKG
RHGINIDYFSIEKKVIDTYETEVKQKFSYMSLDENFFVEDIEDYEKTFFIHDNKQLLELVDNIVNQLKEY
AKVISI
>gi|260685539|ref|YP_003216672.1| hypothetical protein CDR20291_0162 [Clostridium difficile R20291]
MNYTEKELLLENIFFDVTGINFNKNNNLKKELFFSPSLHIQPRELLLVFCEVIENFNIKIPEEKLLNRQF
TSFDNVLKIINMV
>gi|260685540|ref|YP_003216673.1| hypothetical protein CDR20291_0163 [Clostridium difficile R20291]
MSFGKRIEMNNIGVETRGVCTIMCPYTCKMMASSSCNCKNNDYNARGGSYNTYYNKLIHGQRTPDGM
>gi|260685541|ref|YP_003216674.1| hypothetical protein CDR20291_0164 [Clostridium difficile R20291]
MISMIMMLIGVLFIVFGIILTAVEIKGKMPGFYGVGQNAVRKNAIGIIAAGIALIFFRNGLDSIDSILTY
GVFLVIELVVIGLYFLIRIKYDKDGNL
>gi|260685542|ref|YP_003216675.1| putative amino acid transporter [Clostridium difficile R20291]
MEKAKKLGLFSMILLGINSIIGSGIFLLPGKVYSLAGQNSMFIYIFATLLVLSILLCFAEVGSMFDKNGG
AYLYSKKAFGDFIGFEVGTMSWFIRIISWSTLAVGFATALGSFWPESATEYKGCIAAILVTLLSINSLFG
IKSTKIMNNVITIAKLVPLIVFVIVGIFFIKFVNIVPSGNVVNSSMGPAIILVFYAFTGFESFIVASGEM
ENPKKNLPIALITTIFICAIIYILIQIVCMGILGDRLFENSIPIADASSVFLGNYGKVFISVATLISIFG
INIGSSIVTPKCGSSLAEEGSLPAFIGKTNKYGAPYVAIIISLICCIPLVLTGSFEQLAVMSVIARFAQY
IPTCLSVIVLRKRTDVKASFKIPFGPVIPMVAILGSLWLLQQAWAEDISKPITQNRVLIGLGAMLLIAPL
YIFMKKNKEIEHKNKSEDSKLYISREKIQ
>gi|260685543|ref|YP_003216676.1| putative amidohydrolase/peptidase [Clostridium difficile R20291]
MQQALKLKYQTKELGKDFVIESCNSIKPWLINIRRELHKIPELALEENLTKQKVISYLKEIGIDYMEFTK
HNGIMAYILKESADKTICIRADMDALPIEEENNIPYKSIHSGKMHACGHDAHTTMLLGACKVLHSIKDKL
NVNVKFLFQPAEEGFGGAKFLVEDGCLENPKADYIFGLHVMPHIETGLIETKYDTLNASVDTIKISIKGK
RAHGAYPENGIDAIVTASQIVTSLQTIISRNLEPNNAAVLTIGKIYGGDAHNVICEDVKLEGTLRTLNSK
TRNFMIDKIAKIVGDTASAFGCVGTLHVSDENYPAVINEKELVDTVISSTKELLGEEKFILRPNPSLGGE
DFSFYTEHCKGAFFHLGCKNEEKGLISPLHTSSFNIDEDCLPIGVMMHVMNTLYFN
>gi|260685544|ref|YP_003216677.1| putative sigma-54-dependent transcriptional regulator [Clostridium difficile R20291]
MKKSVALVNDSRKDLIDFLENNLKLVFGDSININRYFINEINDNDIINDDVILVMSVERLDKIINNILDK
KKVIVVRRTFREDKIYNLLSLPQGTNALIVNDSDETTLETISLFYKIGVTNIRPIPYMNDNNYKNIKIAI
TPGVPEKVPSFISDIFDLGHRYIDISTFIEIINLLQIDSKEIQSNLVKYSEEIISLDTGIKDKYKELFLK
IEELDTILNLSKDGILFTSKDGEINTYNSKVKDILDINEDIYGKYIDDIFVDSLKVLLSEKEILDKVVVF
NKKYINVNKKNIYNRDEKMGTYYSLQEITYIKKLEQNLTKKLREKGQIAKYTFKDIKTNSPKMFECIDLA
KKVSKSDLSILIRGESGTGKELIAQSIHNNSNRKNQPFIAVNCAAVPENLLESQLFGYDKGTFTGGLKDG
KQGLFELANNGTIFLDEIGDMPLELQTKLLRVLQEKQIMPVGSHNVINIDVRIISATNKNLEQMIDNSQF
REDLYYRLNTIPINIPPLRERKEDILIIMEDLINKKLVITPEAKKLIQNYMWKGNIRELQNVTSYLNIMC
EDIVLEKDLPPNLRSSDNKNTSLKLKYSKNDILNILEILILNKESDVGIGRGLILKALLDKNLQITEGKI
KKIFEYLKKEELIICSSGRYGSKITQKGEDFYNKLKYKGL
>gi|260685545|ref|YP_003216678.1| putative cyclic nucleotide-binding protein [Clostridium difficile R20291]
MKAEKTSIYPIIKNNLNKISIVEYKKGQRFVASDKDLQEVFFIIEGVALVECTTRGGNKFLVDIVPENEF
IGKISYIYEHNLKCDIFAKTNIKLFRFEKNVFEEFYLKPDFIALFHRKCTRRIYELYKTRMVRELFSCTE
VIAYCISNKQENNVCNIKAIRNFSEIYSISRKSRYHSLLKLTEKEIVKKMGNTYEILNYDELHKLAFEVK
EFLEDE
>gi|260685546|ref|YP_003216679.1| putative drug/sodium antiporter [Clostridium difficile R20291]
MQELFSLKDENKRFYKILLSLCIPIIIQNLISTSVNVIDTIMISSLGETSVASVGVANQFFFLFNMSLSG
ITGGAGVFISQFYGKKDVSNIRKVTGLTCVLAIVLSFVFVIPALLTPKPIIHIFSYDSEVVKLCIDYFSI
AVFSYPLIAVSTVFSTGSRGVRNPKLGMICSAFALVTNVILNYGFIFGNFGLPALGVKGAALATVIARIC
ELILMITYVYLYKKDYILKFGLKNLKAIDKIFIKSFSSKSFPIFVNDSVWAIGTVLYSVAYARAGTSAIA
ASQIATSTGNFFIMTAVCIASGASIMLGNELGADHIKRAIEYAKKFSILVFSAGLILGIILILNIPLLLK
MFSVSDSLASDITKIFFIMGILMALKSFNTLVIIGILRSGGDTKYALFLELGCMWLASIPLTFIAAFKGA
PIFVLVLLTYSEEVVKFIFGVPRALSKKWAINIVKEID
>gi|260685547|ref|YP_003216680.1| putative ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MIVLSCNNLNKSFGIDSILENISFTVNEGDKIGIIGVNGTGKTTLFKIISGIYGYDSGDIYTSKDCEIGY
LEQNTNFYSDNTILEEVLEVFKNLIEMESYLRELEVKISEESTKTNSPIIEKIMDEYSHKLELFSDLNGY
GYKSEAKGVLKGLGFSDNDMDKPISILSGGEKTRVLLGKLLLKKPTLLLLDEPTNHLDSEAIEWLEVFLK
QYKGTVMLISHDRYFLDQSVNRIFEVHNKKLKVYNGNYSKFVELSKIEKELELKKFEDQQKEIKKQEESI
ERLKAYGREKHLKRARSKEKALDKVDVLDKPEAYRKKARIQFTPSVQSGNDVLQIRDVSMGYGERILFKD
LDLDIYRGEKVALIGANGVGKSTLFKIITNELQPLSGNIKFGTNVHVSYFHQEQKTLNLDNTIIDEIWEN
NTHLTQTTLRNMLGAFLFVDEEVFKKISTLSGGERARVAILKLILSNANLLLLDEPTNHLDIDSKEVLEE
ALTNYDGTIFTISHDRYFLNTVVDKILVLDENGITEYLGNYDYYIDKKRQIQEMSIIEEKEEKTRTQIKD
EKRKEREQREIEKKNRIKRQNIEKEIEKLEIEIEKLDILLCQEEVYSNPDKAKEVSQEKINLENNLASLY
DEWEEFM
>gi|260685548|ref|YP_003216681.1| putative redox-sensing transcriptional repressor [Clostridium difficile R20291]
MLGNKNISMAVIRRLPKYHRYLGDLLDRDIQRISSKELSDIIGFTASQIRQDLNNFGGFGQQGYGYNVEA
LHTEIGKILGLDRPYNAVLVGAGNLGQAIANYAGFRKAGFEIKALFDANPRMIGLKIREFEVLDSDTLED
FIKNNNIDIAVLCIPKNGAQEVINRVVKAGIKGVWNFAPLDLEVPKGVIVENVNLTESLFTLSYLMKEGK
>gi|260685549|ref|YP_003216682.1| hypothetical protein CDR20291_0172 [Clostridium difficile R20291]
MVFVEELWKKAIEFHGHECPGLAIGFKAALAARKYLGCKQSGDEEIVCISENDACGIDGIQVVLSCTMGK
GNLLLRMTGKSVYHFFNRENGKSIRIYVKSKPFQMDREGYKKYLLESDFEEIFEITDTKLRLPEKARIFK
SLKCEVCGEFASEQYIRIEEGKKVCLDCFNKYERFYEEY
>gi|260685550|ref|YP_003216683.1| ferredoxin [Clostridium difficile R20291]
MAYKITDACISCGACEAECPVSCISAGDDAYVIDAGSCIDCGSCAGACPVDAPQPE
>gi|260685551|ref|YP_003216684.1| putative lipoprotein [Clostridium difficile R20291]
MKNKLVYICIMSLLLFVVGCSNNPNKESTIKKDSKNNQSQVKEEKREPVKKDITISFAGDVTMGNYKGSS
YYGSFDHEFKRQGEDYNYFLKNVKPVFEKDDLTVVNLEGPLTTASNAKEKKFAFKGKPGYVNILKSGSIE
AVSIANNHSEDYFEEGMKDTQFILDENKINYFGLGKDAVVDVKGIKVGLLGYNGLSTEYNEKNLKQMEDD
IKSLKKKSDVVVVYFHWGIELDYYPDKKQKDFAHYAIDKGADLVMGSHPHVIQGIEKYKNKYIAYSLGNF
CFGGNKNPSDTDSYIYQQTFTFSDNKLTSIKEPNIIPTSITSSSSRNNYQPKVLDGSEKDRVLNKLEKIS
KDLNK
>gi|260685552|ref|YP_003216685.1| putative oxidoreductase, acetyl-CoA synthase subunit [Clostridium difficile R20291]
MACNTCKMCESADKKLESFVASKDVETAFHRTEDQKVKCGFGLQGVCCRLCSNGPCRVTPKSPRGICGAD
ADTIVARNFLRAVASGAACYLHVVENTAKNLKNVGITKGVVKGEKTLNQLAEMFGIESDEKYDKCIKVAD
KVINDLYKSRDDKMELVEKIAYAPRVKKWKELGIMPGGAKSEVFDAIVKSSTNLNSDPVDMLVNCLNLGI
STGLYGLTLTNLLNDVMLGEPVIRMAPVGFNVIDPDYINIMITGHQHSTFANFQDRLKDEDVIKLAQSVG
AKGFKLVGCTCVGQDLQLRGEHYQEVFAGHAGNNFTSEAVLSTGAIDIVLSEFNCTIPGLEPIADKYKVK
MVCLDDVAKKANAEYIGLDRSKLDELSNTLIEKALESYKERRGSIEIDIPKDHGFEQSLTGVSEKNLKAF
LGDSWKPLINLIAEGKIKGVAAVVGCSNMTAGGHDVNTVELTKELIKKDIIVLSAGCSTGGLENVGLMSP
GAEELAGENLKEVCKTLGIPPVLNFGPCLAIGRLEIVATELAAELGIDLPQLPLVLSAPQWLEEQALADG
AFGLALGLPLHLALPPFITGGKLVTEVLTEKLKDLTGGHVIVNPDPKSSANQLEEIIIDRRKNLGLKDVE
CNA
>gi|260685553|ref|YP_003216686.1| putative oxidoreductase, electron transfer subunit [Clostridium difficile R20291]
MLKHNKDYDMYTLDLENIDNDSRGHIELDSKHNNPVPILCRHCDEPECVLACMSGAMHKDSESGIVSYDE
EKCGSCYMCVMSCPYGLLKPDDRSKQNILKCDLCKDEEYPRCVANCPSGAIELQKEENDELCSVRG
>gi|260685554|ref|YP_003216687.1| putative oxidoreductase, NAD/FAD binding subunit [Clostridium difficile R20291]
MLHHVISEHRTLKQINFVDEDFMEQNNVKWIAGKTVKGIDINKKVVQTEDITVNYDKLLIATGASSAIPP
IKNLRDGNFVYSVRNIDDIYKIKEKAQNSKNVVIIGAGLVGIDALVGLFKYEQLNISVAFMEKYILDRQL
DEYTASVYENKFKEKGVKFYPSASIQEIVLDNSKNVTGVAFSNGEVLDADMVIVATGVKPNADFLDGTGI
EYDRGIIIDDMCQTTQKDIYAAGDVVGKNAIWPLAVKQGIVAAYNMVGKDKKIEDEFAFKNSMNFMDIPT
ISIGMNTPVDDSYKVLTRHGINDYKKFVFKDNVIYGAVIQGDISYVGVLTYLIKNKVEIYDLENRIFDVC
YADFFNIKENGEFCYSV
>gi|260685555|ref|YP_003216688.1| cyclopropane-fatty-acyl-phospholipid synthase [Clostridium difficile R20291]
MNITKNFLKDYLEKFGETPFLVRLKDEEEFLIGEGSPQFKVIVNNDISKSELLKSTSLALGEAYINRDIE
VEGDLFLTLNLLLKQIDKFNIDNSAVKHLLHSSNSMRHQKKEIHAHYDIGNDFYSLWLDKTLSYSCAYFR
NDNDTLYDAQVNKVHHILTKLNLEEGMSLLDIGCGWGFLLIEAAKKYKIHGVGITLSEEQFKEFNARIKE
ENLQDYLEVRLMDYRELKKSDLMFDRVVSVGMLEHVGRENYELFIKNVNAVLKDGGLFLLHYISGLQESY
GDPWIKKYIFPGGVIPSLREMIHICSDYKYHTIDVESLRLHYVKTLLYWQKSFSENLPKIKEMFDDKFIR
MWDLYLCSCAAAFNTGIIDIHQILFTKGIKNDLPLTREYMYNCSK
>gi|260685556|ref|YP_003216689.1| putative ATP-binding protein [Clostridium difficile R20291]
MMEVYALVGSSGTGKSFKALEFAYENDIEYIIDDGILIYKNKVLAGISAKQANTTIEAVKRAIFYNLEHR
QEVREAIKKENIRKILIIGTSKKMVNQIVERLSIGRVCKFINIQDISTKYEIEIAKQARKEGNHVIPVPA
VEIKSMASGLSINSLKRLFRKGNNRNMVVLEKTIIRPTFSYIGKFYISADVIKQIIEYEVYNFGSIDRIN
KINIENCNNFMNIFVSININDLETIKKIEDIQQTIKKSIEKMTLVNVQKIDINIHKIKKINFLQC
>gi|260685557|ref|YP_003216690.1| NAD-specific glutamate dehydrogenase [Clostridium difficile R20291]
MSGKDVNVFEMAQSQVKNACDKLGMEPAVYELLKEPMRVIEVSIPVKMDDGSIKTFKGFRSQHNDAVGPT
KGGIRFHQNVSRDEVKALSIWMTFKCSVTGIPYGGGKGGIIVDPSTLSQGELERLSRGYIDGIYKLIGEK
VDVPAPDVNTNGQIMSWMVDEYNKLTGQSSIGVITGKPVEFGGSLGRTAATGFGVAVTAREAAAKLGIDM
KKAKIAVQGIGNVGSYTVLNCEKLGGTVVAMAEWCKSEGSYAIYNENGLDGQAMLDYMKEHGNLLNFPGA
KRISLEEFWASDVDIVIPAALENSITKEVAESIKAKLVCEAANGPTTPEADEVFAERGIVLTPDILTNAG
GVTVSYFEWVQNLYGYYWSEEEVEQKEEIAMVKAFESIWKIKEEYNVTMREAAYMHSIKKVAEAMKLRGW
Y
>gi|260685558|ref|YP_003216691.1| hypothetical protein CDR20291_0181 [Clostridium difficile R20291]
MYFLPPHDYKLEELDWIFGHELMYFKSKDLHLKYLVLFLKIVYWFNPFIYIMEKYMDLDCELYCDERVLK
NCTVQQKQEYALTIVNSMKRGINFSNKFVTGLNKQSDIRKRVMNMFSEKHKNGILMALIISLFSSITFFK
FDSTSLIEENDFLERSRYAFEGRQEDMFVTIDSTYADAPIKLRKEHEENCRVNGIVPKDSDSIEIIPRFY
KDCMDLKK
>gi|260685559|ref|YP_003216692.1| putative membrane-associated metalloprotease [Clostridium difficile R20291]
MSNFILNGIFRTVIVSSLSILLILIFKKNVFKRFSKKFNYYIWMIVVIKLFLPFTYYTFTINILRSKKHI
NINNINLEGFNNVSTISNNIILYTWIITVVVYLIYTIFKYIKLKNLINDLSYDVDDREIVNLYKNILEEF
NITKDIKLKYSYEVETPAFFNSCVLLPPHEYKLKELDWIFRHELMHFKSRDLYLKYVILFLKTVYWFNPF
IYIMDKHIDLDCELYCDERVLKNRNSEEKKDYALTILNAMRKGSNTSNKFIAGLHKQSDIKKRVMNMFNE
KYKNGILMALTLCLLSSITFLKVNSTSIVNLNVLPKGFEDLRTVSSIRFSVIGFTYADAPKNMREEYKIN
CESLGLIPKDSDKIEVGVEYYDSLLND
>gi|260685560|ref|YP_003216693.1| putative cell wall hydrolase [Clostridium difficile R20291]
MKKKILIPVFASVMALSVSSIVNADEVNDSSQNKDDKTNTELNLGEYKEVKYKVAKIKDGVAIKIREEGQ
VQNIAYSGDEFTVLGTQGEWVKVKVEDGEGWLATRYVDISEGVGYTNADKVNLRKDKSESSEVIEELEKG
SSLLVLEDNGDWLKVKDGETEGYVKSSYISDKAPVIEEPQVNPSIDQNVDSTNNNQQNNANTNQQNNNSN
VPTANSNAVQAVLNLAYSKQGCPYVWGAEGPNTFDCSGFTQYVYRNAVGKNIPRTSKAQSKYGQTVSKAN
LQPGDLVFFTTNGSGSVSHVGIYVGGGNMIHSPSTGKTVSVTSINSSYYTARFVTAKRIL
>gi|260685561|ref|YP_003216694.1| aspartate carbamoyltransferase catalytic chain [Clostridium difficile R20291]
MLKSRNLIQPEDFSIEEIDEILELAQKIIDNPSKYSRICEGKLLATLFYEPSTRTRLSFESAMNRLGGRV
VGFSEPNSSSASKGETLGDTMRIVSGYVDIIAMRHPQSGAASEAARYTEVPFINAGDGKNQHPTQTLTDL
LTIKSLKGTLESHTIGLCGDLKYGRTVHSLVKAMARYKNTKFVFIAPEELKMPDYIKEAIKGHAYYETNN
LDDVIGSLDVLYMTRVQQERFEDKSEYERLKNYYILNKAKLEKASKDMLVMHPLPRVNEIDIDVDSDDRA
VYFKQAKYGMYVRMALIIKLLGINED
>gi|260685562|ref|YP_003216695.1| dihydroorotate dehydrogenase electron transfer subunit [Clostridium difficile R20291]
MYKILENIYIGEDMYRMKVKGNFEGKMGQFYMLRAWDTYPVLSRPISIHDIDEEGITFLYKVVGEGTQIL
SNLKVNDNIKLEGPYGNGYAKVDGKVALVGGGIGVAPLYLVAKNIKNCDAYLGFREDVILEDEYKQVCNK
VYTTVGNTFVTDIIDVEKYDYILTCGPTPMMEKLVKMVEGTKTRIMVSLENHMACGVGACLVCTCKTNGG
NKKTCKDGPVFWGEDVIFNG
>gi|260685563|ref|YP_003216696.1| dihydroorotate dehydrogenase, catalytic subunit [Clostridium difficile R20291]
MASGTFGFGKEYNEIYDIQKLGGISSKGLTLNKKPGNNGMRVHETPSGMMNSVGLENPGVQGFIDYELPF
FSKLDLVRIANVGGGTLEDYLLGVQMLNDKPIDIIELNISCPNVKAGGMAFGIKNEVAREVVREVRNITK
LPLVIKLSPNAEDIVGMAKVCEEEGADGVSLVNTFKAMAIDIKNRRPVFENVYAGLSGPAIKPIALRMVH
EVCKNVNIPVMGMGGITKATDAIEFIMAGATCIQVGTANFMNPRIGIEIIDGINEFMDREGIKSLDEIRG
II
>gi|260685564|ref|YP_003216697.1| orotate phosphoribosyltransferase [Clostridium difficile R20291]
MSKVDVVDILKKSDALLEGHFLLSSGKHSNRYVQCAKVLRFPEYAAEVLSTVVEQIKDLDIDLVVGPAMG
GVIVSYELGRQLGKEAVFTERKDNTMELRRGFEVKKGAKIIIAEDVVTTGKSTMETKRVLEALGGEVVGV
ACIADRTNHDIGMPIYSAIKLDIQVYESDECPLCKEGKLPVVKPGSREFKELGM
>gi|260685565|ref|YP_003216698.1| putative ketopantoate reductase [Clostridium difficile R20291]
MKNQLNENHKKVVFFGVGAVGATFAEQFFNSKYDFKILCDNERKKRYLEEGFIINGKRYDFNYVTKDEYK
QEADFIIIGLKYNNLKENIKELDGLVGKNTVIMSLLNGVDSEEIIGERFGIGKMVYSYVTNIDAKKINNN
IIHTTNGIIVFGNKDNSEDRKTNIITEVFDDVNIEYILSKDIQRDMWWKYMVNIGVNQTSAILGAPYGVF
QSSEHLRELAKSAMREVVAIAQAKDISLTEDDVENSLHRILEHSKEGRTSMLQDVEAHRPTEVDMFSKNI
CKLGKKYSIPTPINQTLFYMIKVIESRF
>gi|260685566|ref|YP_003216699.1| LysR-family transcriptional regulator [Clostridium difficile R20291]
MFEELKTFVAVVEYKNFTKAGEYLNLSQPSVSKHIKNLENYFKVVLINRSIKQKTIFITESGQILYKRAK
EILNLLNITYHDVSQVSDAITGHLKIGASLTIGEYILPNFLALFSQKYPDIYVEVFIKNTSIVSSHVKDY
ILDIGLIEGTCSSPSFIQEYFFEDKMVLALPYNSHLLKDFSFDKLQDQKWIVREDGSGTRDYLDMFLSVK
EIIPKSMMVFGSNYAVKESVRNNLGITIVSNLVTSLPVLNNELSVIELGSSYNRHFSYIFPKDITLSKAA
TIFIEELKIFSNLNSI
>gi|260685567|ref|YP_003216700.1| hypothetical protein CDR20291_0191 [Clostridium difficile R20291]
MLKKKSSLTLKTIREILPGLFISVLVGYISIFISILIPKVGAASISIFLGMFVGNLFLNQKVFQKGYKFS
ETDLLSYSIVLLGATLSVSTLIDLKVSGILFIILQMTITIIAALYIGKKLGFEENFRFLMASGNAVCGSS
AIGAIVPVVNATDKEKGIAVTIVNVTGIFLMFLLPIISQFLYSHELVKTSAMIGGTLQSIGQVVASGAIV
GENVKDLATIFKIVRVIFLVVVVLVFGHMKNQSNREILEEEKDEIKKKKVTIPWYVIGFFITCALFSMNI
IPKEVSVLCKEISNKLEIIALAAIGLKVNVKDLVKQGKEVSLYGLFVGTVQVVSAVVLIKIFI
>gi|260685568|ref|YP_003216701.1| putative DNA glycosylase (DNA repair protein) [Clostridium difficile R20291]
MNVYEKGNGVILEGVTDFDPVHIFECGQCFRWHKQEDGSYTGVARGRILNVKKENDKIYLNNTNLKEFNS
IWYNYFDLGTDYTEIKNKLKNMDEYLNKATEFGWGIRILRQDGWEMLISFIISSNNRIPMIQRAIENLSR
KFGKYIGEYEGNEYYAFPTPEELNKASQEEIRACQTGFRDKYIKSTTQAVIENNDEVSEYTNLSTEDCRK
ELLKFNGVGPKVCDCIALFGMQKYDSFPVDVWVKRVMQEFYIDEDMSLPKMRTYGIDKFKEMSGFAQQYL
FYYARELGIGK
>gi|260685569|ref|YP_003216702.1| cardiolipin synthetase [Clostridium difficile R20291]
MGVIGTIFLFYLIISYLAGAIISVIILLENRDPAKTMSWLLMFIIFPGVGLMIYAISGRNIRKRKLFKTQ
KLANNIKEKKLFDTLEKITEIVELEKESIKQNKLLRDEEDGSYRKRVINMLLKTGMFPFTKNNKVDVFVD
GNEKFKRLIEDIREAKDHIHLEYFIIKDSEIGRVLKEELIKKAKEGIKIRILYDDVGCWRFWFNRKFFRE
MREVGIEIAAFLPTKFPIIGGKLNYRNHRKIVVIDGIIGYTGGINIGDEYLGKNDKFGYWRDTHIRIKGI
SVYMLQMTFLIDWYYTTKEVLVTKNYFPSVGNVGESMIQVVASGPDSDWEDIHYAYFSAICQARKNVYIE
TPYFIPDESLLKAIKSAALSGVDVRIIFPKIADHKIVNIASYSYFEEILRAGGKVYLYNKGFIHSKVVII
DDKIASAGTANMDLRSFMLNFEVNAFIYDEEVIRVMTDDFFEDLSHCEELNLEVFKNRNIIQKIKESVAR
LFSPIL
>gi|260685570|ref|YP_003216703.1| 10 kDa chaperonin [Clostridium difficile R20291]
MKIRPLADRVVIKKVEAEEKTASGIVLPGAAKEQPQIAEVVEVGPGGIVEGKEIKMELTVGDKVIFQKYS
GTEVKIEGQEYTILRQSDVLAVIE
>gi|260685571|ref|YP_003216704.1| 60 kDa chaperonin [Clostridium difficile R20291]
MAKEIKFSEETRRALEAGVNKLADTVKVTLGPKGRNVILDKKFGSPLITNDGVTIAKEIELEDRFENMGA
QLVKEVATKTNDVAGDGTTTATVLAQAIIREGLKNVTAGANPILLRKGIQKAVIVAVEELKNQSRIVETQ
EAISQVASISAGDEEVGKLIAEAMEIVGKDGVITVEESQTMNTELDAVEGMQFDRGFVSAYMVTDVDKME
AVLNDPYILITDKKISNIQELLPVLEQIVQQGKKLLIIAEDVEGEALSTLVVNKLRGTFDVVAVKAPGFG
DRRKEMLQDIAILTGAQVISEELGYDLKEADLSMLGRASSVKVTKESTTIVDGSGDKKAIEDRVTQIKHQ
VEQTTSDFDREKLMERLAKLAGGVAVVKVGAATEVELKERKLRIEDALNATRAAVEEGIVAGGGTAFVSV
IPAIGTLIESLEGEVKLGAQIVKKALEEPLRQIAINAGLEGAVIVQNVVNSEAETGFDALNEKYVNMIEA
GIVDPTKVSRSALQNAASIASTFLTTEAAVADLPEKEDAGMPGMGGGMPGMM
>gi|260685572|ref|YP_003216705.1| hypothetical protein CDR20291_0196 [Clostridium difficile R20291]
MDLRKLLEEVKNENIDIDFALEKLKDLPYEDLGYANIDHHRELRNGYPEVIYCEGKSDEHILGIIDKMNQ
KSSNILGTRCRKETFLKIKEIYNHAEYEEASKILKIQNHDIENIGKGKIVIATGGTSDIPVADEAYHTAK
FLGNDVDRIYDVGVAGIHRLLNKRHKIDSARVIVAVAGMEGALASVIGGLVDVPVIAVPTSVGYGANFGG
LAALLAMLNSCASGISVVNIDNGFGAGYLASMINKL
>gi|260685573|ref|YP_003216706.1| GMP synthase [glutamine-hydrolyzing] [Clostridium difficile R20291]
MKHELVLVIDFGGQYNQLIARRVRENNVYCEILPCTASIERIKEKNPKGIIFTGGPNSAYLEDSPTISKE
IFELGVPILGICYGIQIMSHVLGGVVRKGNKQEKEYGKTSITYGKSSLFEGITTNSVWMSHTDLIEKVPE
GFTIVANTNDCPVAAMENVERNLYGVQFHPEVEHCLEGDKILTNFLYNICKVKGDWTTDSFIEDKIKELK
EKIGDKKALCALSGGVDSSVAAVLIHKAIGDNLTCIFVDHGLLRKNEGNDVERIFREKFDINLIRVNAED
RFLSKLKGVSEPEAKRKIIGEEFIRVFEEESNKLGKMDFLVQGTIYPDVIESGHGNAATIKSHHNVGGIP
EDVDFQEIVEPLRELFKDEVRKIGLELGIEEGLIFRHPFPGPGLGIRVIGDVTKEKCDILREADAVYMDE
LRKAGLYREIWQAFATLPDVKTVGVMGDERTYAYLVGLRAVTSSDGMTSDWYKMPYDVLERISNRIINEV
DGVNRVVYDITSKPPGTIEWE
>gi|260685574|ref|YP_003216707.1| putative membrane-associated nucleotidase [Clostridium difficile R20291]
MILNQIFIEDGGIMRNKIIIGITFSLVLLMSGCASKQTAEINVLATTDLHGVIPYELTSYVKEERKKDKN
LTLVDAGDFFDSGEVFGSSMDSYFSARYKDGDNNTESYIETPISKDMKEVGYDVAVLGNHEFISNNKFYL
DNMISDFEKQKINILSANTYKKNGDSYTKPYIIKNINTPEGNVKLGILGLTIKEVGERKQWKDGKLVDSK
SLELKDQEGYNGELYMNDLVEDAKKWVGIMEKEKPDIIVAVAHTGEKPKKPRNPGNRIQDLAQQVDGIDA
IVAGHNHVQIEQHDYKNKSGENVIVTEPGKHGEYISKINFKLEKNNDKWNIVDKSSKLIKFEKNQESDKF
GEFISSINKVSKDKKEIRLSEVKTPEWDKIYVFKSGTSADDIYKTIGYKWRNISSPKGDDMVQIVVMNNN
KPVSYIYGEAEVMPINIKCDESEYKNNVVTIYPNKNDKFKIEKGKQEYSINLKHIQ
>gi|260685575|ref|YP_003216708.1| hypothetical protein CDR20291_0200 [Clostridium difficile R20291]
MINIRYLEILEAIEQTGTFTGAAKKLHITQSAVSHAIAELEQQAETSLFDRLPRGVCLTRCGISLLDEAR
SILTACRNLDKKISRLEECTPINIVSSITIASFLLPPILSRLKNSFPSLKVNVRVESANSAMDILKSGEA
DICFWEGIEPQGAFRTILLGSYKLCVACAPTFPLSEQTLSLRQLCTFPLLLREQGSAIRDTLDSVLSLSN
QKAYPVWESVNSFALIKAAEAGLGITILPENLLLDSLLHKKLRLIELDEIDMENKMLAILHKDKNITQPL
EIILDNISNVL
>gi|260685576|ref|YP_003216709.1| hypothetical protein CDR20291_0201 [Clostridium difficile R20291]
MKRRRNILNQSRKIYFWLLIINLFISTFTFGGGYVVVPMIRRYFVNQKQFFTEDDLMSMAAVAQSTPGAI
AINLSALAGYRVAGTLGVVISCTAAIIPPLVILGLVSAFYTTFISNAIVTAVLKGMQAGVAALIVDLIID
MCSMILKQRSLFLSTMIPIAFFANFVMSINVIFILSVCCFVCVMQVFYKKRENK
>gi|260685577|ref|YP_003216710.1| putative chromate transporter [Clostridium difficile R20291]
MFTDIITISQMTPGPLAVNTSTFVGLQIGGFWGAVAATLGCVLCGVVISLFLYNFFQKHQNSTYIFEILN
GLKSASLGLIISAAATIIILALFGTNKVYFNSIFEMLNWTALIIFFVILLIVRKWKINPIVIIIISGILG
IFFYL
>gi|260685578|ref|YP_003216711.1| hypothetical protein CDR20291_0203 [Clostridium difficile R20291]
MLECFIAEDSKIKDGVNIPTLVFKTLHDRYFKTQYFDSYYNSLKCKKKLVEINNVHNSYYIDSEKFCQEA
YDWFVENQ
>gi|260685579|ref|YP_003216712.1| putative DNA repair protein [Clostridium difficile R20291]
MKINNYKNQSIITNPKKFENKYQDLPKTPIELLKVVQSLVIHGDQGKLYGISFNKQQSDEELLRTIPQML
KRIFEINSNPLTIPRNPKQRLVGMCRDYSLLLVSLLRYRGFEARMRAGFANYFENELTYEDHWLVEYYDT
LTKRWIRIDAQIDDIQKNYFQINFDTHDVGKTDGFLTGSEAWIRCRQGHAHPDDFGYNKNWKGWHSVKGN
LLHDFNNMIGLELLPWDLWTELSSKKYNQLTRAEKNLLDEMAEILSSGNIKIEDLNLLIEKLPEDYLKSI
FSQLKILGISEIKELGNPLELEKKFKFAKAINKSIKNSLCHNKSSIYLKGGRQNNLKDVEVTIPKNQITV
ITGVSGSGKSSLAFDTIYEEGKRRYFENLGNGAKLSEQLQKPEFDLLQGLTPTIAIEQKKGSQNPRSTVG
TLTSIWDYLRMLFVSIGKSYCPYCKTPLEKKNNTKNYCPHCQTIFSKINTSTFNANSHTGACHDCNGLGF
TYQVNPQLIVKDPTISILDGATYYFGKLRGKKPNGNWMVGELYAIAKDKNIDLDIPWNELPRDFIDAILY
GTDDKIYEFSFESKGRESKIRRPASGAINHIQRLFRESSSENNTLHQYMNKIPCNTCGGELLCIEARFTT
IKGYRFPELTKMTIEQLWNWLCELPNQLQKNELSLVNDILTELKIRVSYLLKVGLSYISTDRTAPTLSGG
ELQRVRLSSQLGSELVGLTYILDEPSIGLHPRDHNLIIKMIEELRDKGNTVIVVEHDKDTILSADYIIDV
GPNAGTKGGFIIAEGTTQEIIKNPNSITGKYLSTYNKISSQNKIIPSKWLSLKGCHANNLKNIDVEIPLN
CMCSITGVSGSGKSSLVFHSLLPALEEKLKQKSIPNKNYTALTGFDAIDDFILMDQTPIGKSSRSTPATY
INIFDEIRSLFTETPQAKQKLLDESYFSFNSKKGQCPNCQGLGKTKIILQYMADQWVTCNECQGKRYQKE
ILSIQYKGKTIADILDMEVAEAKTFFSDCSDIYRKLSLLDEVGLGYLKLGQNTLGLSGGESQRIKLAKEL
GTKTKKRMLYILDEPTTGLHFKDIENLLITFRKLVNEQHSLLIIEHNTEVIRASDWIIDIGPDSGINGGE
IVASGTPDEIKINPNSITGHFI
>gi|260685580|ref|YP_003216713.1| putative signaling protein [Clostridium difficile R20291]
MKLSRYKKNSLVLSIILCSLIISILVITVFNTVKLHNISNKQSKNYLNDVSTQIVMNVDSKIKFILSDLR
IMADFIKQYEGDSRYEYLSKRKTSYKYYDVGIIDLEGKAEFLSGKKFDLKNTASYKKGIEGKEYSEVIES
MGFVLYSVPIFNDNHEVSSILIGVSNKESMDEILNIDSFNGEGTIEIINSQGKTLFIGKNNELIKDLSYK
YKDSADEPWAQKMLNDFKNDKSGNITITSSKGVQCLLTYHPITRGLNDWHFLLIVPEDVVLGELNKLNSF
TIIMTFITTCIIGIITLILYIIRRKYVNQIENIAYLDSITNGINSTKFSMLVKPLISESPDSTYMMIAMN
IKDFKLINDCFGSEKGNMTLKHLYNILYKNIDENEEFVCRHDADLFYLLIKNRPVLEALELLYKIEADTN
YFNKNRENPYFLRLSVGIYTIENHNEDLITIQDHANTARKSFNKTHQSDFSFYSDIERKRLISEKEISNL
MEKALENKEFFMCLQPKIDIKSGKISGAESLVRWKNSEKGIIYPSNFIPLFEKSGFICKLDLYILEETCK
LISKWIKEGKEVLRISVNVSRQHLNDKLFLEKYKHICNKYNVPTCLIDLELTESIFLENPEAIDIIEDIH
SNGFKCSIDDFGFGYSSLGILKDFKVDIIKLDRSFFVSKNNIDRGKVVIKSIIELSKRLGMKVTAEGIEE
LEQVEFLKNVGCDYIQGYVFSKPLLISDFENFAYENNKIKNIHY
>gi|260685581|ref|YP_003216714.1| putative transcription antiterminator [Clostridium difficile R20291]
MISGRMLLIMNFLKGKNKTSYKDISKQLSIEERKVRYDINNLNIVLRSLNKSVIQKMNKGVLIIPDDFQV
VCINNNEYVFSLTERVSIMKIISMFKIDNLNLEKLSKEFQVSRSSIKNDLNVLSSELERNQITITYDKSF
KISGEEDLIYKQRLNILKSYSYLFGKEKSDLSVFEKYLVNVIEKIFKGIYLIDIYNWSMNLLLQMGWTLN
DESFTWYVSNIFLFTWYIHSDEKHPLESASLSEPCFENKFDQEFETIIQKKLTKEQIFLLKSFVFFTNKY
ASLNEDMDLISTEIIVQDLIYNMSEILEISFKEDMILYKGLLNHIAPLIERIKQNIQIYEELLHVIPDKY
QYVLEATKVSIQKNRVLSQIKNENEIILLAIHFLGSIHRNERNNYKNILLVCGFGYGVIAMLKDSLVNDY
QINIVESIPSYKLQDYKEWESIDFIITTSKIVIDLPKTIIEINPFLQEEDYLKFEEKGIKRKNVLTNYMS
IKKRLDFLEEDAQKRVLSIICQELGYSDERILFRQLNLSDLIGIDTIRIIDEDMKWEDAVKISSNILANC
DFVSAQYAENIIDILKNVGFYAVKDNEFALLHGNDSSLVKVSSISLLICKEAVSFGDKKVKIIFCLASRD
KKEQIPAIINLTKMVYKTNFIAMLESAKTKEEAEVLIHKYEKEVTV
>gi|260685582|ref|YP_003216715.1| PTS system, IIa component [Clostridium difficile R20291]
MNKLVNVKCSFKIHANSKEEAIVSLVDVVSKEGYLIDKNQFLEDVLKREETLSTYIGHGIGLPHSQSVGV
KNSCITIGKLDIPIEWTEEGEKVDLIFLISVTKDNENNLHLKILSKLARLLMHESFRNQIRCSDEQTVYN
LIKEKIEEED
>gi|260685583|ref|YP_003216716.1| PTS system, IIc component [Clostridium difficile R20291]
MRILKFLQKHLMTATSYMIPFVVAGGILFALSVTLSGQAAVPETGWLAKLNQIGAAGLALFIPILGGYIA
FSMADKPGLAPGMIGAYLAKEVNAGFIGGIIAGFIAGFVVLQLKKIKLAPTMRTLGSIFIYPLIGTLITG
GIIVFLIGEPIASFMTWMTNWLNGMSGVSKIPLGGILGGMIASDMGGPINKVAATFAQTQVDTLPYLMGG
VGVAICIPPIGLGLATLLFPKKFSKEERDSGKASLLMGCVGITEGAIPFATSDPVRVIPCIMAGSIIGNI
MAFLLGCLNHAPWGGLIVLPVVDNRLGYIASVLTGAVVVAVLMKLVKKDVKEDEEIEEDLDESIELIFEE
L
>gi|260685584|ref|YP_003216717.1| PTS system, IIb component [Clostridium difficile R20291]
MKIVAVTSCPSGVAHTYMSAESLELSAKKFGIEIKVETQGSSGIDNELSLKDIDEATCVILTNDVEIRNM
ERFKGKKVVRMSVSEIIKKSDALIKKIKDTFQ
>gi|260685585|ref|YP_003216718.1| putative sugar-phosphate kinase [Clostridium difficile R20291]
MKKLPIKTVVQRLLDLQEEGKSATLLGIGPMSPNLLQASFELAKDDDFPLMFIASRNQVDADELGGGYVN
GWNQETFTKDIKKIADKVGFDGLYYLCRDHGGPWQRDKERNDHLSVDEAMELGKKSYLADIEAGFDLLMI
DPTKDPFEIGKVIPLDVVLERTVELIEYCENERKRLNLPDIGYEVGTEETNGGLTSTETYETFITRLKVE
LDNRGLPMPTFIVGQTGTLTRKTEQVGTFNFRNAYDLAQMAKKYGVGLKEHNGDYLDDVTLLEHIPSQII
ATNVAPQYGTEETRAYLKLAEVECKLEKEGLVDKTSNIRHVLLVNAIECGRWRKWVVGEQKNLTTEEIFK
NEVLSNEILDIAGHYTFNNDDVKKEIEVLYDNLSKNNIDGQRFVVDHIKRPLRDYAECYNLKGVTTRILN
K
>gi|260685586|ref|YP_003216719.1| putative hydrolase [Clostridium difficile R20291]
MINLIFDVDDTLYNQLTPFYTAYNKVFSSIKDISIEDLYMSSRKYSDEVFHMTENGEMPIKEMHIYRIMK
AFEELGNSITEKDAQSFQDEYIYQQSQITLIPEVERILNFSKERNINLGIITNGPSNHQRMKLKQLNIEN
WVDKSNIFISSEVGFSKPDTNIFRVAENVMNLDRENTYYVGDSYRNDVLGAKKAGWKSIWLNHRGHEVEE
LFYKPDFVILEHKDLISLFIKICSYKNM
>gi|260685587|ref|YP_003216720.1| putative spore coat protein [Clostridium difficile R20291]
MRNMIENLIKNNTYIDDKVIMLSMLSSAKASANMYLNSALTSSTPELRAIYSASLTQMVEGHTALTELSI
NKGWVKPYDKPIQQLTCSYKESQNVID
>gi|260685588|ref|YP_003216721.1| hypothetical protein CDR20291_0213 [Clostridium difficile R20291]
MRTLSETEKISLAAVIKMESDGLLMQRAINMLISDEDLKRQSESSILATEGRIKAIQQFIVENEILISEE
V
>gi|260685589|ref|YP_003216722.1| putative nitroreductase [Clostridium difficile R20291]
MLEVIKNRRSIRTYIDKNIEEDKITEILKSAMQAPSSKNAQPWEFIIVDDKELLKELSKSQHRAKHIEFA
PLCIVVLGNRDKFLKPGKWIQDLGACTQNLLLEVTNQGLAACWAGVFPKNKVVNKVKQILDLPVKLVPYA
LISIGYSEEKNEFIDRFDENKIHRNVYKNR
>gi|260685590|ref|YP_003216723.1| phosphoribosylaminoimidazole carboxylase catalytic subunit [Clostridium difficile R20291]
MKVAVVMGSKSDYPKLEEGIKLLEKYGIEVVARALSAHRTPEQLSIFLKEIEDDTDVIIAAAGKAAHLPG
VIASQTLIPVIGLPIKSSTMDGLDSLLSIVQMPKGIPVATVTIDLGLNAALLALQIMTLKYPKLKEDLKS
YREEMAQKVLEDDKNLRG
>gi|260685591|ref|YP_003216724.1| phosphoribosylaminoimidazole-succinocarboxamide synthase [Clostridium difficile R20291]
MLLYEGKAKQVYSTDNENEYVVYYKDDATAFNGEKKAEISSKGILNNKISTIIFEMLKENNINTHFIKSL
SDREMLVKKVEILPLEVIVRNIAAGSICKRVGLEEGVVFDEPIFEISYKNDAYGDPMLNDDYAVAMKLAT
REELKFLREETLKINELLKAFFLKLNLKLVDFKIEFGKDSEGNIILADEVSPDTCRLWDVNTNEKLDKDR
FRKDLGDLVEGYTEVLSRMNNK
>gi|260685592|ref|YP_003216725.1| amidophosphoribosyltransferase [Clostridium difficile R20291]
MCGVLGIYSNKDVTKELYYSLYSMQHRGQESCGLALLDDGEIKYKKDMGLVGDVFKENELSKLKGNIGIG
HVRYSTAGGSHVSNCQPLVGSCRKRQLAIAHNGNLVNANYLKDMLEEDGYMFQTNSDTEVILYILARYYK
GDIVESLKVTMDYIKGAYALVIMSQEELVAVRDPHGFRPLVLGKKGDEYIFASENCAIDILGGEVIRDVE
PGEIIVVKDGELKSYFYSENYKPVKKSCIFEHIYFARNDATIDNVNAYEFRIKCGERLAQNETVKADMVV
PVPDSGWPGAIGYANASGLKISEGLVKNRYVGRTFIKPTQEEREIAVKIKLNPLSTIIKGKSIILVDDSI
VRGTTSKQLVKSLREAGAKEIHLRITSPPVAYSCYYGIDTPNRSKLIASSNNVEEMREYIGCDSLKFLDI
EGMLDATEHKSTFCKACFDGEYPVKKIDKEELLSC
>gi|260685593|ref|YP_003216726.1| phosphoribosylformylglycinamidine cyclo-ligase [Clostridium difficile R20291]
MLTYKESGVDIDEGNRAVDLIKGKIKGTYDGNVVGDLGNFSGLYSLKDFVGMKEPVLLASTDGVGTKLKI
AQMMDKHDTVGIDLVAMCVNDLICQGAKPLFFLDYIALGKLVPEHIEKIVGGIADGCKMSGCALIGGETA
EMPGMYGEDDYDLAGFSVGIADKEKIVSGNNVKSGDVLVGISSSGVHSNGFSFIRKIFLETYNYKMEQYV
EELGMTVGEALLTPTKIYVKLALDVLAKHDIKAIAHITGGGLIENITRVIPKGLGLDINKKSWEKPPIFK
MIEGFNAVDERELHKSFNMGIGLVLIVDKENADDVVNFINNRENDNAAYVDKKYSELLEDKAYIIGEVVD
SHEGVELC
>gi|260685594|ref|YP_003216727.1| phosphoribosylglycinamide formyltransferase [Clostridium difficile R20291]
MLNIGVLISGGGTNLQAVIDGTESGEIKGQVKVVISSKQGAYGLERAKNHNIKAICETDEDKIIEILKEN
KIDLVVLAGYLKIISPKLVNEFRNKMINIHPSLIPSFCGAGFYGEKVHQGVIDYGAKVTGATVHFVDEGA
DTGPIIMQDVVKVNQDDDAKTLAKRVLEVEHRILKESISLFCENKLKLQGRRVFINE
>gi|260685595|ref|YP_003216728.1| bifunctional purine biosynthesis protein [includes: phosphoribosylaminoimidazolecarboxamide formyltransferase and IMP cyclohydrolase] [Clostridium difficile R20291]
MSKRALISVTDKTGVVEFAKELNKLDYEIISTGNTFKTLKENGVNVMQVEDVTNFPEILDGRVKTLNPYI
HGGILYKRDKESHVETVNEHKIHSIDLVAVNLYDFEGTLKAGKSHDEIIENIDIGGPSMIRSAAKNYKDV
IVVVDIKDYDSIIEKLKTDTMTLEDRKKLSYKAFSTTGRYDALISSYFAGEVGDTYPDILNLTFQKEQTL
RYGENPHQNGFLYSQSNAKNPILNYEQLGGKELSFNNLNDLHGCLEVMREFKDSEEVVSVAIKHANSCGV
GLGKDAFEAYTKCYEADKVSIFGGIVGITSTIDKATAEKLNEIFLEIVVAYDFEPEALEVLKQKKNLRIL
KLAKIEDSLQPYEMKYLDGKLLIQDRNNILAEKSENVTKAKPTDAQLKDMEFGMRVVKNMKSNAIAIVKN
GQTLALGCGQTSRIWALKNALENNKDKDFTGAVLASDAFFPFDDCVTLAHEYGISAVVQPGGSIKDKDSI
EACDKYDMVMVFTGIRHFKH
>gi|260685596|ref|YP_003216729.1| phosphoribosylamine--glycine ligase [Clostridium difficile R20291]
MKILVVGGGGREHAICWKLSKEKNVEKVYCAPGNAGITNVAECVNIGDTNIEELLKFAKENEIGLTIVGP
EVPLVMGIVDEFEKEGLRVFGPNKKCAQLEGSKAFSKEFMIKHNIPTAKYKEYTNLEEAISEIDSFGYPV
VIKADGLAAGKGVVIPENREDAIATLKEMMSDKKFGAAGDKIVIEEFLKGIETSILAFVDNDTIVPMASA
KDHKKVNNYEQGPNTGGMGTFSPSEIYTEELANKVKETVLEKTLEGFKKDGLNFKGILFVGLMITEDGEK
VLEYNVRFGDPETQSVLFRLETDLHEIMETILDNKLKDIEINYSDDEAVCVMLTSGGYPDSYEKGKIITG
LENLDDDIVVFHSGTKMLDGNLVTNGGRVIGITAKSTTVKDAAEKVYENIKKINFEGMHYRTDIGR
>gi|260685597|ref|YP_003216730.1| formylglycinamidine ribonucleotide synthetase [Clostridium difficile R20291]
MLNTENKDSMVRRVLVEKREGFDLEAKALKKDLVESLHIDNIENLRILNRYDVEGISEEVYENAAKTIFS
EPNLDVVYYEEIPKLNDERVFAIEFLPGQYDQRGDWAAQCVQIVNQGIRPAINTAKVYILSGKITDEEFS
KIKDYCINPVDSREASLEKPETLKMETEIPTTVEVLDGFIDLDENGLRTFVSEKGLAMTLGDLQHVQKYF
KDTEKRNPTITEIKVLDTYWSDHCRHTTFMTEIENVKIEDGKFNDIVKEAYQMYLNSRDNVYVNRHKDIC
LMDIATVAVKELKKNGKLNDLDESEEINACSINVDVEVDGKMEKYLVMFKNETHNHPTEIEPFGGAATCL
GGAIRDPLSGRSYVYQAMRVTGSADPRTTLEDTLPGKLMQRKITTEAAHGYSSYGNQIGLTTGQVAEVYD
ENFVAKRMEIGAVIAAVPKENVVRERPEAGDVIVLLGGKTGRDGCGGATGSSKEHSEESILTCSAEVQKG
DAPNERKIQRFFRNKEVAQMIKRCNDFGAGGVCVAIGEIADSLDINLDLVPKKYDGLDGTELAISESQER
MAVAIKKENKDKFIQLAVEENLEATHVATVTDTGYLRMFWNGKAIVDINREFLDTNGVKQTTDVHVTKVD
EENTFFSSNEIVKDVKCASMKDKFTKVLSDLNVCSQKGLVEMFDNTIGGNTVLMPFGGKYQATPTQGMVA
KIPVLGGETNTSTIMTYGYNPKVGKWSPFHGALYAVVESVCKLVAIGGNYSTTRLTFQEYFEKLGNNPEK
WGKPFSALLGAFYAQSKFEIPAIGGKDSMSGTFKDIEVPPTLVSFAVDTVDAKKVVSPEFKKADSKVVML
CVNKAENDVVDFEELKRNLDKVRELIHGNKVLSTYALGFAGVGEAISKMAFGNKIGFKFSEEAEKTFTDD
KLFEASYGNIVLELANDDLCMLEGYNYVVLGSTTKEASIFIKGEELALDELYKAHCSTLEPIFPTKTEEV
KSKIETISYISQGEAKKSSLSIATPRVFIPAFPGTNCEYDSARAFERVGANANIRVFKNLTYKDIEDSID
TIVNEIKSSQIIMLPGGFSAGDEPDGSGKFIATVFRNPRVQEAINEFLTQKDGLMLGICNGFQVLIKLGL
VPYGEIRVPSESAPTLTYNNIGRHQAKIARTRISSNKSPWLAQTNVGDIHNIAISHGEGKFVASEDVMRE
LIANGQVATQYVDFNNEATYDIEFNPNGSFYAVEGITSADGRVFGKMGHSERIGEEVFKNIIGEKDQKIF
ESGVKYFR
>gi|260685598|ref|YP_003216731.1| dtdp-4-dehydrorhamnose reductase [Clostridium difficile R20291]
MKILITGSNGQLGKELVSQLEAINQSINQPKYVILATTRNDLDISNQTNIDNFILHNKPDVIVNCAAYTK
VDACEDNIEIAYKINALGVRNLAIASEKVNAKLVHISTDYVFNGFSKYPYREDNKTEPNSVYGKSKLMGE
KFVEQFSHKYFILRTAWLYGNGNNFVKTMIKLSLENKEVNVVNDQFGTPTSTVDLAKIIIRIMETEHYGV
YHATCEGECSWYDFAKKIFELKNIDIKVNPIKSNEFKCKAQRPLYSVLDNFMLKLIGLNSFRKWEESIEE
YLERYDINEK
>gi|260685599|ref|YP_003216732.1| glucose-1-phosphate thymidylyltransferase [Clostridium difficile R20291]
MKGIILAGGSGTRLYPITKCISKQTLPIYDKPMIYYPMSVLMLAGIQDILIISTPRDIKAFEELFGDGSS
LGLKITYAIQEKANGIAEAFIIGEEFIGNDRVSLVLGDNIFYGYGFSERLENAVKRKGATIFGYHVSNPN
SFGVVEFDKDFNVLSIEEKPTVPKSNYAIPGLYFYDNDVVEIAKLVEPSDRGELEITSINSEYLKRGKLK
VELLGRGMAWLDTGTHKGLLDASNYVEVVQTRQGLYIACLEEIAYTKGYISREQLMKLAKPLIKTEYGQY
LLKLASEDMQYGR
>gi|260685600|ref|YP_003216733.1| dtdp-4-dehydrorhamnose 3,5-epimerase [Clostridium difficile R20291]
MGKINVIKTKIEGLYIVEPNVFCDERGYFMESYNKKDFIEQGLDMCFIQDNESSSRKGVLRGMHFQVRYP
QGKLVRVTEGEVFDVAVDLRKDSQTFGKWEGVILSDKNKKQFYIPEGFAHGFLVLSEKAVFNYKCTNYYY
PEFEHGFIWNDKQISIEWPLKGIEEIFLSEKDKKQKSFKDICIRR
>gi|260685601|ref|YP_003216734.1| dtdp-glucose 4,6-dehydratase [Clostridium difficile R20291]
MKKILITGGAGFIGSNFVHYMLNKYVDYFIVNLDLLTYAGNLETLIEIQDSSNYKFVKGDISNREQMYKL
FEEERFDIVVNFAAESHVDRSVENPDLFIKTNIIGTQVLLDASIKYGVKRYHQISTDEVYGDLPIDRKDL
FFTEQSPINPSSPYSASKASADLLVSSYYRTYGLLTTISRCSNNYGPYHFPEKLIPLMILNALENKQLPV
YGNGENVRDWLHVYDHCTAIDLIIHKGNIGEIYNIGGHNERSNLEVVKMILNLLDKSEELISYVNDRPGH
DLRYAIDATKIENELGWKAKYDFDLGIKETVKWYIENESWWKAVLSV
>gi|260685602|ref|YP_003216735.1| putative transglycosylase [Clostridium difficile R20291]
MESCFISVTLKFIKFRKGRFILNEISSLINILALTQLSGSNTTNQCNCTYNSSSGFDMIMMTLLKALSQN
NQQTSNGYNLSSNSENLFDELGSVVNNTASRFIDVDTKDKSVKSRIENAIEQASKKYNVDSNLIKAIIKV
ESDFNPNTVSSAGAKGLMQLMPENCRDLGVTDPFNIEQNIDAGTRHIKEYIDMFGGSIEMGLMAYNGGPG
RMKSRGVESISDLYKMPKETQNYIPKVMKYYRG
>gi|260685603|ref|YP_003216736.1| hypothetical protein CDR20291_0228 [Clostridium difficile R20291]
MGINIDKLNISPSINMEVKKLKESNKFSDKLNSLKQSSSLEDIKRNLESVKKAGERLVLTQNYGDISIYK
NAVKEYLKSVVDNMYSLDKNSSFWEHQYYKNVKIVDSKLEDMTSKLISEEKENIDIVSTVDMIQGLLIDM
YR
>gi|260685604|ref|YP_003216737.1| flagellar motor switch protein [Clostridium difficile R20291]
MNSKKEDIYELNFGQLIEEKSGVIEENQNVFNAKVNVAVSIGNTTETIKNILDLKEGSIIKLSKNVDEKL
DIYANDRLFAYGESIITNEKLSVRLSKIEDSDVN
>gi|260685605|ref|YP_003216738.1| negative regulator of flagellin synthesis (anti-sigma-d factor) [Clostridium difficile R20291]
MDIKNVSSNIVVNNYLKNTSGVKKVEEVKKINKTDKIELSKFAKEMASVSNMSDENIRNKKVDEIKNALE
NGTYKIKPKEIAKKMIEDMRG
>gi|260685606|ref|YP_003216739.1| putative flagellar biosynthesis protein [Clostridium difficile R20291]
MITDLKVIIYEEKNIISKMMELLKEQFDYIVEKDLENLNMLNPKLEDISRELASIEIKRRQLFGDDISMS
EVVENSNDRYLKEIYTDLKHILALAKNQQESNDSLIKKELIFTKKMINFIKPADKQTATYNSYGNIRK
>gi|260685607|ref|YP_003216740.1| putative flagellar hook-associated protein [Clostridium difficile R20291]
MAGLFSILNTANSGMNAHQKAIQTISHNISNLDTDGYSRQRTEFATNSPMYMPSLSNSIARGQLGTGVHV
TDVTRARNSFYDYQFRAEAHKYGNTVSKYDYYNTIETIINEPSDYGISAGIDDFFKGWESLAKDINSDSK
KSLVVENASNLATLISESYKKLNKLKGDIDDNINSEIKQINDMLKSLEDLNKSIDVISGSGSTPNDLLDE
RDRILDDLSFKLDLENSDVKNMLSDGKLELNELKNADGTWKTGVSGTLQGLFEMHGKIDTYKSDLKDVSD
GLAKQINDVYNTSAGITVTDFFITSNVDGEDIIKVNPAIKSNPNELKLTADEASKIAKLKDEKIDIGVAG
GKVSTISDHYKAFAESVGLDSQKVNQDEVNQRKIINNIDNSRMSVSGVSLDEEMTELIKIQRSYQASAKV
MSTAVQLLDVVINGII
>gi|260685608|ref|YP_003216741.1| flagellar hook-associated protein [Clostridium difficile R20291]
MRVSTGMMSSNYLNSLQDNLQRLDKVNRQVNTTKEINKLSDNPYKAIKILNSKSEIKTMETYVENCKDTG
NWLETTDTALDQLGKLLSDIKKTLVASGDGAYSDDELKTLSNETNEKMKEIANALNATHEGKYIFSGSNT
GVPPVECIDNADGSVSLKFNSSLNLNKLNDSLSMDIAQGISVDYNVKLSSLGFDPTKTDPFEELNNISKK
LANPDADAIKELTTTCLGDMEQLIENTVNVRSIYGTKANTVEAMKEKNDDSLIQLKDILSQNEEIDYGEK
LVQLKAAELTYQASLQTGGKLFNVSILDYI
>gi|260685609|ref|YP_003216742.1| hypothetical protein CDR20291_0234 [Clostridium difficile R20291]
MMKVTLKKGILGFENLKEYELLDIEDNDSLKEFNSTEEEGIGFVVVSPFEIINEYEIVLNQETIEKLEVK
SPKDVVLFNIITLGQTFEESTVNMKAPIVINIKTNFGMQIILQDDKYSIRHPLLRGDNGC
>gi|260685610|ref|YP_003216743.1| carbon storage regulator [Clostridium difficile R20291]
MLVISRKKDEAVLIGESIEVKIVGVDGNNVKLAISAPNNISILRKEIYEKVKSENIKATNKNIKILKSLK
>gi|260685611|ref|YP_003216744.1| flagellar protein FliS [Clostridium difficile R20291]
MYGENPYNSYKQNAVFMASKEQLLLMLVDGAVKYTKIARAAILDKNTQKAHRELVRVQDIFTELMVTLDQ
NAGQWAKDMYKVYDFVRYELSRANIRKDIQVIDNVLPVIEQIKDTWHEADKKSKEERSRYK
>gi|260685612|ref|YP_003216745.1| flagellar protein [Clostridium difficile R20291]
MELNLAELDKLSKEELLLMLVDGTVKYTNISKEALLNNDYLKAHNELIRVQNIFTELMTTLDQDAGQWAK
DMYKVYEFIKSELAIADENKDIKIIDDILPIVKQIRDTWHEVYNQLKI
>gi|260685613|ref|YP_003216746.1| flagellar cap protein [Clostridium difficile R20291]
MSSISPIRVTGLSGNFDMEGIIEASMIRDKEKVDKAKQEQQIVKWKQEIYRNVIQESKDLYDKYLSVNSP
NSIVSEKAYSSTRITSSDESIIVAKGSAGAEKINYQFAVSQMAEPAKFTIKLNSSEPIVRQFPPNASGAS
SLTIGDVNIPISEQDTTSTIVSKINSLCADNDIKASYSEMTGELIISRKQTGSSSDINLKVIGNDNLAQQ
IANDNGITFANDASGNKVASVYGKNLEADVTDEHGRVTHISKEQNSFNIDNIDYNVNSKGTAKLTSVTDT
EEAVKNMQAFVDDYNKLMDKVYGLVTTKKPKDYPPLTDAQKEDMTTEEIEKWEKKAKEGILRNDDELRGF
VEDIQSAFFGDGKNIIALRKLGINESENYNKKGQISFNADTFSKALIDDSDKVYKTLAGYSSNYDDKGMF
EKLKDIVYEYSGSSTSKLPKKAGIEKTASASENVYSKQIAEQERNISRLVEKMNDKEKRLYAKYSALESL
LNQYSSQMNYFSQAQGN
>gi|260685614|ref|YP_003216747.1| hypothetical protein CDR20291_0239 [Clostridium difficile R20291]
MDKLKEKLNLYKDISLQIINLIEKEEYIKISSKLGERQEIINSVSEIDRNDFIQLYNRMELIEIDSRIRD
ILQGQLLEVKKELHEYKLTKQVNTMYYNLNREKVNIFNKKV
>gi|260685615|ref|YP_003216748.1| flagellin subunit [Clostridium difficile R20291]
MSDYINEELIKKIKSRNDKDVNYTKEGKIMRVNTNVSALIANNQMGRNVNAQSKSMEKLSSGVRIKRAAD
DAAGLAISEKMRAQIKGLDQAGRNVQDGISVVQTAEGALEETGNILQRMRTLSVQSSNETNTAEERQKIA
DELLQLKDEVERISSSIEFNGKKLLDGSSTEIRLQVGANFGTNVAGTTNNNNEIKVALVNTSSIMSKAGI
TSSTIASLNADGTSGTDAAKQMVSSLDVALKELNTSRAKLGAQQNRLESTQNNLNNTIENVTAAESRIRD
TDVASEMVNLSKMNILVQASQSMLAQANQQPQGVLQLLG
>gi|260685616|ref|YP_003216749.1| putative glycosyltransferase [Clostridium difficile R20291]
MDIEERVRLCFTPFFFYKYTFERKIYMLLSIVMIVKNEEKILEKTLKSLTTLRSSIESELIIVDTGSTDD
TINISRKYTENVYFHNWNNDFSSMRNISISYAKGEWLLILDADEILIDSSTIVKFFKDGLDKKFNSASIQ
LKNLYSYDKKLYGYCSVLRLFKNIDFRYHGKVHEQPIYKNPIFNNVADFEHYGYLFEDEEIRLNKVKRNE
KLLFEELKENDNSPYTNYQLGKNFIILGKYHEALYYLEKSYELYSKLESAPGYLITSLVKTYLYLGKHKK
CEKLCLKYIKKDMNNIDIYYYIAQAQVDLGKYENSIDSYKRYIYLLDNYEISTQANSLFSDTDTVGLRDE
AIITLIKIYYKLEKYESVISEYNNIEDMEKKKNVYFSLFMSLYKLNRFEDIKNYYKEVSNSKIEKNSFYK
NIEEVINNIKDDEKEHVYKILCDIEGNYGILNQIRINKCVSIDKCKEILNEEKEIIYAYIIKVAFEDKID
LLDIFYEMEYVWIEKYLKYLLALERSFNLVLYKYIISRPNTSDIKKIRVYKAISKVVLESISLSDEKYKE
IFYLYIMYSYKYIRYIYRNLSDFELIKFVCNDLDKFTIEFKHLLDIKNKVNDANEKLEYIHSMRKLLNEY
PFYNKIIKILISELEENIKESEEFKDLKDSFIISIENMIETGKINDAKSLVDDYSKTFMDDVKILNIKGI
LYMFENKLDKADFMLKKALSLDVENEDTIYNIEYLKSLR
>gi|260685617|ref|YP_003216750.1| glycosyl transferase family 2 [Clostridium difficile R20291]
MNTPIVVNEKSKDIIKDWQYTYTNEDIKFTSIIILTYNQIEYTKLCIESIRKFTPKNKYEIIIIDNNSSD
GTVEWLKGQSDIKSVYNNKNLGFPKGCNQGIELATGENILLLNNDVIVTPNWLYNLNKALWSQDNIGAVG
PITNACSYYQQIDVDYKSIEDMFMFAHKINTSNINLWKYRLKLVGFCMLIKKSVLDNVGVLDELFTPGNF
EDDDLSFRMLESGYKLLLCQDTFIHHFGSVSFKENRNKYTDIMYINRRKFETKWGFNPEYSGMIRTDLIS
KIDDSLEANINVLEIGCGIGATLLEIKNIYKNASIYGIEISESAGKLAKYSADVLIADIEKVKLDYEKDF
FDYIILGDVLEHLTDPWKIVNELKQYLKKDGCLISSIPNIMHVSVLRNLVLGNFTYEDSGILDKTHLRFF
TLNEITKMFNDSNYIINSVTATSMPLSEIDNRFIDTMCKESCKEMRQQYESYQYIVKATKSIDTKRYSSI
SMVNLKYALMRIDNELDVDSNLSYIFDNYNITEPCFVDDIEYLVDTFVINKATLLNRLGVEAFNRGLGDF
SINMFMTVLEMDRDDIDSIYNITSVLCELEEFDTAYNLIKNSSKKVQSESDIQDILYFIEGKRYE
>gi|260685618|ref|YP_003216751.1| glycosyl transferase, group 2 family [Clostridium difficile R20291]
MNNDKICFITCVNDERLYEECLVYINSLDIPKNFSIETVALRGADSIASAYNKAMRETDSKYKVYLHQDA
FIINKNFIYDILEIFKKNTDVGMIGVAGVKDIPVNGIWWDSDKKAGKVYDSHTGKMDIYEFSNFEECFNE
VMAIDGLIMITQYDVFWREDKFDGWHFYDLSQSMEFRQNKYKVIVPKQNKPWCMHDSGVANINNGYDEYR
IKFVKEYINLDLYRENFYEFDKKKASTILKSNKHVMDCMKEELTEQLRLKNYKDVLDIVSKIAHFSVFNH
TGLYSCEKCERALLECANNLPEIENTKLFTKKDLKRRKVLHVLSEGYSTGGHTRLVKNWIEIDKDSVHSV
VTTWQSDTLPDWLLKAIDDSGGEVISLDLISDDYLKRAVALRKIAYDWADIVILYVHMWDTIPVVAFGVD
GKIPILHVNHYDSTFWLGTSIADIVIDFSEASQLITLDKRGIDKSEILPMPLKEKEVFSKSEVRKRYNLE
DDVTIILTIASERKYNSVNDINYFKIAKTLIENTDNTIIIVVGVDTENLYWKTLSNVTDNRVICFGTTAN
IDDFYKISDIYLESFMVGSHTSKLDAILYDLIPVKFKNEVSPIFTNMWNFIDKFDYKNIKEVIDMIRRYN
TSEFDRDKIKEKQSEIKHFVIDKHCIEIKNYIDKIYKEANHHKVKYDLYKNDEIEDYQLFVALYGYMVKN
KNMS
>gi|260685619|ref|YP_003216752.1| hypothetical protein CDR20291_0244 [Clostridium difficile R20291]
MNNIHINKFEKSCEKNWDYFVENKSINGTFLQTRNFLNYHEEGKFTDHSLIIYKGEEILAVVPACETYEN
GERVFFSHLGSTFGGIIIRSGFNDIRHVNAITNKLETYLQEQSFNKVYLKNTSRIFCKEDTSLLEYFLFK
NNYMFYDELSMFLELSKYKKDILANFRYSKRRYFKYSLKNNLTFKRLYSDEDIVCFFNLLSNCLDSKGAK
VIHSVEELLEFKNNRLKDIVEFYAVYIDDIMICGSMVFNFQERVYHTQYLASNSTYNKYYPMIFLYYNLI
KDALERNFKYLSFGISTLNRGKYLDEGLATFKEGFGSSAICNRTYYKNINK
>gi|260685620|ref|YP_003216753.1| putative carbamoyl-phosphate-synthetase [Clostridium difficile R20291]
MKRLMILGSIKYFENIVMSAKKEGIYTIVCDNRIDTPAKKICDEAIDVDVFDFDKIKSIAIDKKIDGILT
GFTDSLMKPYVYIANELNLPCVISCNQLESVTNKAIMKKYFKNNAIPTTDYCIIESLKDLEKIQGLNFPL
VIKPVDGYGSRGVYFVSNIEELIEKFEYSKEASQDGQVIIEEFYESEEIQGLAWVHNGESHVFYIGDREL
VNIHTGRAGKPDRLLYPSKYCFQYEEEIKSIYQNITQAFDIKNGPLYVQMLVGAYGIKVSEVMPRLPGGC
DYMAISQITDLDIGSLFANFSVNNEVNFDEIKKYNMHLSKCVYALPIYIRPGTIKKINNIDKIENLDYVT
QFLLLVKEGDTIGLYEDERQDCGRVYGIANNIFDANIKKKCIHEMIEIFDENNENMIENF
>gi|260685621|ref|YP_003216754.1| putative ornithine cyclodeaminase [Clostridium difficile R20291]
MIDMKLITHEQIMSLNISQKQGYEWIKESFLTKKDCQLPPKISMVEEGHVFYNVMPSLNHNHMIGGIKMV
TRLPGRNPSLNSDIFLYNMKDAKLKAILDGNYITAFRTAAVAGLAIDTFAKKDFNTISIMGLGVTASAIM
NMLSYTLKDKNINIKLLKYKDQAESFIKKYEKNEQFSFEICDTHEELIVDSDVVISTVTYTDEYLSEFKW
FKKGALLLPVHVMGFGNVDYLFDKVYLDDYNHLKHLENIDRYKYSCEFYNVLSKQAKGRENDDERIISYN
IGLSIHDILFANKIYELCETLNCEEIELKEPKEKYWI
>gi|260685622|ref|YP_003216755.1| hypothetical protein CDR20291_0247 [Clostridium difficile R20291]
MNLLLVKFNNLLKQFQTHKEEYEQKIKDVMESGYYILGNEVRHFEEEFASYVGSKYCVGLASGLDALIIA
FRALGISEGDEVIVQSNTYIASVMGISINGATPVFVEPNEYYNIDSSKIEEKINSKTKAILVVHLYGQAS
KMKDIQELCDKYNLYLIEDCAQSHGAKYDGKMTGTFGDIGCFSFYPSKNLGAFGDAGAIVTSNEEIADKV
KILRNYGSEKRYYNKFVGYNSRLDEIQAGLLRVKLKYLNEIEIEKSKIVDRYLNEINNPKVILPKIENNC
THVWHLFVLQVEKRDTFMEYLKKNGIESIIHYPIPPHLSEAYAYLGYKKGSFNIAENYSDKVVSIPLFVG
MEDEEVSYIIKIINEY
>gi|260685623|ref|YP_003216756.1| flagellar basal-body rod protein [Clostridium difficile R20291]
MNTYDIIKMGLDATNLRSQTIANNIANINTEGYKRHYVTFEETLNDAMPKIEEKTDNSKGLRVDGNNVDI
EEEKVNQAMATLQYNALISFANGKIAMTKSIISGR
>gi|260685624|ref|YP_003216757.1| flagellar basal-body rod protein [Clostridium difficile R20291]
MRISASGLTAESLKMDIISSNVANINATRGPNGEAYRRKVVSFEENYDNKLGMLGVKVTSVEDDKSPLKE
VYDPSHPDAKPNGYVEYPNVNILVEMTDLITASRAYDSNVDTLNAQKSMISKALEIGK
>gi|260685625|ref|YP_003216758.1| flagellar hook-basal body complex protein [Clostridium difficile R20291]
MPITQINNLMQGAKLDNLIGETKPLTLNNKEEKKNFEDVIIDTIDKVNFQQVTADDMKEKFIKGEDVSMH
EVMLIGQEAQLSMQYLIEVRNKIHDAYQEMNKVQI
>gi|260685626|ref|YP_003216759.1| flagellar M-ring protein [Clostridium difficile R20291]
MIASFKNKIKEQVAKSRTKISSLKKGTKIALGIGVIAICLALVFTAISASKNKYAVLFSELDVQDAADIS
AELESKKIDTKVKGSTIYVPRTEVDKLRLELAPSLTGGSKGFALMDDSSSIGLTDEEFQIKKQRMIQGEI
EKTIKSFPQVEDTRVHITFGESSVFEKEAIPGSAAVYLMLKPGTTLEKNQIKSVMALISGSVTNIPEKNV
QVIDNKMNLLSEGILEDEDVDENNQPTNSLINVDKNKASEQALNKQLEKSILEMLEPIFGKGKVKATVNA
DLSFDTAEKTEIKIDPDKVAIKETRSKNSSKSATNNVQGVDANMNNQGNNNGTNTEDSLDESFEYETGKI
ETHTIVAPGELNRLTASVAIDGKIAKGVQADVEDIVNNAIGMDGARGDTLSVVSMVFDPEGKAEAKQELE
EIKKEGFKKNIIKAVIGVVAVVAIGAIGYLIYKKRSEREDMDYEDEDYISKSDSVDRKDNPLLGDDPELT
LEEAVKMYAEEKPDQVTEIIKTWLNE
>gi|260685627|ref|YP_003216760.1| flagellar motor switch protein [Clostridium difficile R20291]
MSTEITNVNAFDLSDINESDKKEKIEGEGLKKAAVLLMTLGPNVSSDIIKSLPDKQVQKIGLEIANISSI
ASKERREILKEFVEINRAKDYVIEGGLEYARELLSNALGNAKANKLLEGISINTSTKPFKHIIKLDVKKI
LEILRDESAQTIAVLLAHMEPENGAEVLSYLDFDLQNEVAMRISSMGSISPEVIKVIESSLEDKLHSISG
DDFKDYGGVSTLVQILINSDRKTEKNILGTIEEQDPALAAQIKSHIFVFEDIVKLDDISIQKVLKEVTMK
DLVYALKGVDDEISDAIYRNQSSRAADALKEEMEMVGVIKVTQVEAAQQKIANIVRKLEREGAITIVRNF
GGDFVE
>gi|260685628|ref|YP_003216761.1| flagellar assembly protein [Clostridium difficile R20291]
MVTLLNNKIIKSKKASYKGVLDLTIIDKVRVGESNVNKENDCRFRDEVIKEAIESAEIKKNEILEEAKMN
AQNIEKQAYEKGYSQGQKNGYEDGYKESYDEYTQKAKDEADFIKNQADLILLQANEKMTEYIKEKNKEIV
RLAINMASSVLKKHFEDEESMSDLLKQIIQDYEGSSSFIVRCNSFYKDNIEKEFELFKEETSLKSSVFVI
ADDSIDKGNAIIQKENGRIIVGIDCAMEKLKEELLGE
>gi|260685629|ref|YP_003216762.1| flagellum-specific ATP synthase [Clostridium difficile R20291]
MYKTDISIDFDKINKKIENLELTISEGRVKKIIGLTVEVEGIKAFVGELCVIYNQVNKPVNCEVVGFKDK
EVILMALGELTLIAPGCKVISKGIPLSVMCSDNLLGKVLDGLGNPIDNSDAVLGDRYNLNNEPPDPMKRK
KIRNIMETGVRAIDAFTTCGEGQRIGIFAGSGVGKSTTLGMIARNAKADVNVIALIGERGREVLDFIDKD
LGEEGMKKSVVVCATSDKAPLVRLKGALTATAIAEYFRDQGKKVILMMDSVTRFAMAQREVGIAIGEPPA
QKGYTPSVFAILPKLMERTGTSDKGSITAFYTVLVDGDDFNEPIADTTRGILDGHIVLSRDLANKNHYPS
IDVLNSLSRLMNEIASKEDIKIASFARDMLAEYREAEDLINIGAYASGTNKKIDEAIYYHEHIINFLKQG
INEKSSFNETISSLRRIFE
>gi|260685630|ref|YP_003216763.1| flagellar protein [Clostridium difficile R20291]
MELDKNFKFRLQKVLDLKIKDEEEIKMEFAKIQQKKIDIESNLENLESNYSKYSISKNNDSVQNQKITIN
YLLALNNSIMDLSEELDKSTNELEKARKQLISKQIERKSLEKLKEKKYGQYYKEEQLKEQSTNDEFASMS
YLRNRQVL
>gi|260685631|ref|YP_003216764.1| putative flagellar hook-length control protein [Clostridium difficile R20291]
MKIQADSYNIIKDIGNRKSSSKNKNIKNNKFEDNLYKATDHKKVKDRRETSKQNVSSDKRENSDNECHLD
EDKSNHLEDENTYEKDCSNNNEALHQLLNLLKDNYKKDKDINTILNNLKKLSISDELKQELKLNKNILNK
IANQNLELNRASTNNPNDIENLDIMKLRELLENNASEDIEVISKTTENDTKSIDLYSFDSNRIDTLNSNK
QKDDSSDILEKLAGVNGNKSGNFGQVINKSVDMNKIKNDNVNLKQIESNVMDDSIKAIKHMKTNDIQELT
IKLRPKELGDMNIQLLKDGESMRAVVTVFNKDVFDSINKNIADLKQHLELTNVNIKDVSVQMHSDNTNTS
DTFDKAFEQQNRQNNQENMSKQNTNDKRNNVVIEDEIKENIIDDDRVDLLA
>gi|260685632|ref|YP_003216765.1| putative basal-body rod modification protein [Clostridium difficile R20291]
MYGIATALAGTQVNYRSNNLSQLERNINDIANKQVRSKGNQTVTDNGTPIIGQGDDADKDLFMKILVAQM
GNQDPMNPQDPTEYVSQLAQFATLEKMSAMNDKLDILLALSNSTLINSALSMATSLIGKEVEVSGEEEED
ENIVGVVKSTYIKDGEVHLELEVDGSDKTVGVKYEKLLKIGEVDANSGEENDSSEQESPEEV
>gi|260685633|ref|YP_003216766.1| flagellar hook protein [Clostridium difficile R20291]
MIKAMYSGVSGMKANQTKLDVIGNNVANAGTTSFKKSSARITDSFYQTVLYASAPTAALGGTNLGQVGVG
SKISSINKDMTQGNVQPTNRPSDLMIDGDGYLPVVRQGTVMYTRDGSFNLDTGFKAADGALKNIKGGRLV
NGDGYMLQGVIYDGEYKADTGEFIKKGDAKGKEPIVIPLQSISPKDGTVQNVLEYNISKDGTVEFLLSDG
QRTQFVYDIPDGAKVGDTPAGIDKLKGTIQKVQTYAFQNPAGLDAEGGNLFKPSANSGDPQIAGATGNII
QGAIEASNVDIAEEFTEMIIASRSFQANSKIISTSDEILQEIINLKR
>gi|260685634|ref|YP_003216767.1| putative flagellar protein [Clostridium difficile R20291]
MIRVTDLNGRRYILNSDLIVRIDSVPESRILLTTGEKNLVKESVDEIVDKVIKYKRKVNVGYIRSEK
>gi|260685635|ref|YP_003216768.1| chemotaxis protein [Clostridium difficile R20291]
MKKTDSLTFIGLILSTVLVLFGAVKGSSSGLKSFFDFASILITVFGSFGALMITFTIDDIKLIKDALQYS
FKTMNISKLDLLNQFKTLSKKARREGLLSIESDVMKIQDPFMKKGLELCIDGLEVNEIRSILELEIDSVE
ETNNRYSKLFKTWGTFAPAFGMLGTLIGLIQMLSDLTSPDLIASGMGKALITTFYGSLLANIALNPIAYN
IDEKTEKEIYVKEMMLEGIISIQSGESSIVVEERLATYLSNNEKLEIMKSNKNTERAMSNGA
>gi|260685636|ref|YP_003216769.1| chemotaxis protein [Clostridium difficile R20291]
MARKKNKKKDEINPDAWLATYADTITLILTFFVLLYATSVVDMEKFKNIADALKGQFSGISMFSTGSSTS
EKSPIESVLVDKNDKSNLEQDLKDKVNNSNLQNSVTVKDDSRGILLELDDSILFDSGISELKADSKATLN
KVYDMIKMMKNKIVIEGHTDNVPVKSSTHESNWDLSSSRAVSVVRYFVEEKGMDPRLFSATGCGEYQPLV
SNETAKGRAENRRVNILITID
>gi|260685637|ref|YP_003216770.1| flagellar basal body-associated protein [Clostridium difficile R20291]
MFKNKKIIIIILILIIFSAGAGFFILGEGGNKQIDKIAGLFIPTGKGKDEVKTENLDLEEMVLKLADEGV
RYLKVSITVSYDSSYKDIEKNTPLIRDNIINCFMAKRADDFTADNLKNIKEEIKNTLNIQLGENVIQNIY
FTNIVVQ
>gi|260685638|ref|YP_003216771.1| putative flagellar protein [Clostridium difficile R20291]
MILYLLKILICIPIILILIVLSLKISQGTLLKKYNDKYIKILDIVNISKNNSIIILKIGEEGCIMASSSS
SMNKIKDLTKEEILRIENDIKERNFKIQDFKMERIKKKYDFSRYIGKFTKKEDK
>gi|260685639|ref|YP_003216772.1| flagellar biosynthetic protein [Clostridium difficile R20291]
MELLSKLPLADVPYTSSMQLFLFLTALMFLPFVMFMMTSFVRIVISLSFLKSALGAQQAIPSQILVGLAI
VLTIFIMRPVLNEINEKALQPYMKEEVTMEEAMKEAEGPIKEFLLKQTRQTDLDLFVEQAGLKEKKLTRE
NIPLSVVVPAFAISELKTAFQIGFLIYIPFLIIDLVVASVLMSMGMFMLPPVMISLPFKLLLFVMVDGWN
LIVKTLILGFG
>gi|260685640|ref|YP_003216773.1| flagellar export protein [Clostridium difficile R20291]
MSEFMIMSVLKNGMFTGAMIAAPVLIVSLVVGLLISVFQATTQIQEQTLTFVPKLIAILLVVAIGGSWML
HTLISFTSEIFNMMSLITK
>gi|260685641|ref|YP_003216774.1| flagellar export protein [Clostridium difficile R20291]
MIFVFIRIVAFFGTLRILFPAGTPALFKSLFAIIISILISSTMQIEYATNIDNIVLFTLYGINETITGIM
LGYITNLCFYSIRMAGSMMDQQMGLSMINMFDPNSMTQTTLIDNLMNWTARMIFFSMDGHHVLIRGIRYS
FELIPIGKSFVDNNIDYIINIFVQCFLTGFKIAIPIVLCLLMADFILGLISRSVPQLNVMIIGMPLKILV
GIALFIISIPLIVNQISHLLSQIPKMYEGTFALAPMFFMGSTDKTEEATPKKKGEQRKKGNIAKSKELPV
AMTLLAFTLLVPTLFSYVVDTLKSSLNYFLSLDFYMNINYSSIEKLVIAGLMDFFKIFLPIAIPFLVLGI
VANLFQVGILFTGETLKPNLSKLNPVSGFKNMFSMRSLSTLIKDTAIISILAYIGYTFFQDNYLDILKLG
NIYLPTLMYTVKDLVYSILSKICVAMIVIAVADYVYQRYSHKKQLRMTKQEVKDEYKNSEGDPEIKAKIK
QKQRQISSQRTMQAVPSATVIVTNPTHLSIAVRYEKGKDQAPVVVAKGADYLAFKIREIAKGNDIPIIEN
KPIARLLYKQVEIDQEIPEDMYQAFAEILVAVYKIKNRYKVLKR
>gi|260685642|ref|YP_003216775.1| flagellar export protein [Clostridium difficile R20291]
MNKFNLKENMDVIVAFGVVGIVLMMIVPLPTFILDILLAINISLSVLILLMTLFTTNVLDLSIFPTVLLV
TTLFRLGLNLSSTRLILTQGYAGEVIEAFGSFVVGGNYVVGIIIFLIILIVQFVVITNGSGRVSEVTARF
TLDAMPGKQMSIDADLNAGVIDDKTARKRRKELQQEADFYGSMDGANKFVKGDAIAGLIVTAINIIGGIV
IGAVMLNMTLMGAAQTYVRLTIGDGLVSQIPALLISTSAGIIVTRASTDENFGGLVSKQLTAIPKAVMMT
GCVLIVLGMMPGLPKPAFFSLGIGAIAAGYFLGREKKDTLEDLEFEKPDMVNPDKNEVEDVTNLINVESI
EVEIGYGLISLADESAGGDLLQRIASIRRQCAIDMGIVVQPIRIRDNLQLNPNQYNIKIKGNVVGGYEIM
PNMVLCMDPMNQGFSIFGIKTIEPTFGIEALWIESDKVEDAEIKGYTVVDSSTILITHLLDIIKSNAHEL
LGRQEVKTIIDAARENYSAVVDELIPDLMTLGEIQKVLKNLLREKVNIKDRVTILETLADQSRNTKDIEL
LTEYVRIALARSICNNLVDDDKTIVVATLSPETEELVSNNLQRSVNGTYPAVDPENTNKIFESIQEVMNN
VYFNHNIPVIVVSPKIRAPFRKLVEIVYPNLTVLSLNEIPNDIKIKAEGVVSIYDDEKVYS
>gi|260685643|ref|YP_003216776.1| signal recognition particle complex, GTP-binding subunit [Clostridium difficile R20291]
MTKKYTANTIQDAMNLAKMELGDNITLIDKKEVRKSGIQGIFSKKDIELTIGWEKRENVEQKDLKREIEQ
LKLIINNMGFDNKNDNDIDKICKNLLSLELNEEIVESIRIDLQEMKFNGIDTSKNLVEILKKKIKIENQA
INGKIALVGPPGVGKTTTIAKLAAKLVFEENKKVGVITIDTYRIGAVEQLKIYTDIMNIPFKGVISPDEM
ELALDEMKDCDVVLIDTTGRGYKNSMQILEIKNLIDKAETDNIHLVVNCTTRESDTKAIIDSYRNVNFKS
LIITKLDETITYGSIFNIMNYAQKPISYITTGQNVPDDIIKPNEDKIIRLLLGVESI
>gi|260685644|ref|YP_003216777.1| flagellar number regulator [Clostridium difficile R20291]
MIDQAQILRKMAMEKRGLDEFIVENENVPKIITIASGKGGVGKSNLATNLSICLTKLNKKVLILDADIGM
SNIDIIMGVNVKGTIIDVINGEKNIEDIISQTKYGVNIISGGSALNHIEDFTEAQRNKFIHSIEQIHDVD
FIIIDTGAGMSKSLLSFIYCSTEFFLITTPEPTSLTDAYSLLKAISNFGIKRSANIIINRVIDLEEAKST
YKRIKMVVDKFLNLNLELYGYIIDDKKVSLCVKKQIPFILEYPTSIASKCIIAIAKRMVSQSREDIVDNK
SFLRKMFSIFKS
>gi|260685645|ref|YP_003216778.1| RNA polymerase sigma factor for flagellar operon [Clostridium difficile R20291]
MNREELIKENMPLVKSIARKFFIPGKGFEYQDLVNSGVIGLIDAINKFDAEKGAKFSSYSYIKIKSAILD
EIRNQSPISKHNLTKVNKYNRVVEKLQSKLLREPTSYEIAKELNVSEKELHDIESNIDMLNIVSLNYVIF
EDTNETVQDVISDREEEAPENIIEEEEKLEILSKAISNLNEREKLILSLYYYEDLNLKEIGKVLGVSESR
VSQLHRKSIRNLRNKIKELKYSI
>gi|260685646|ref|YP_003216779.1| hypothetical protein CDR20291_0271 [Clostridium difficile R20291]
MIQIILIVVSILIIVTIVINLHKESKNKDNRYFDKIFEQEYEANDRLIIAEKRRFFLDKVLAEIRSNNHI
KVYENYNLIKANEERKENIFIESKKEVRQENELSLKVKHLISSGYDDVEICKMLDIGKGELSLIRSCYKI
>gi|260685647|ref|YP_003216780.1| flagellar basal-body rod protein FlgG [Clostridium difficile R20291]
MIRGLYTAVSAMITNQQKQNVVVNNLANMDTNGYKSKQLLTKSFDELKLEGYNNYANGTKQKQIIGDISP
GISMDETITNFNQGPIKTTDNKMDVAIQGKGFFLVSDAAGNQFYTRNGNFRTDNQGDLITSEGYYVLGTN
TATGAVGHINVGNQKFEVAKDNTISLDGNAMYKFNIVDFNDYNNLKKEGDNLYSGGGAMKVNNALTIQSA
IESSNVDMVSEINNMMTISREYEANQKIIQAMDSKLAKIASEIGSVR
>gi|260685648|ref|YP_003216781.1| putative flagellar basal-body rod protein [Clostridium difficile R20291]
MYTMFYTSKTALSANQSKLDIISNNIANSDSTGYKKINMEYSDLVDEVLNRPSYPTNGNDISTGTGAKAT
APMRIYEQGALAPTDSKSNLAIDGEGFFRVIRKDGTYAYTRNGGFNIDGLGKIVDDNGNILDVQFDAGYN
YNNTNIDSTNLTVSRNGELFVDNKKIGKINLYQPIGTQNFISEGDSLFVATDAAQIKQVEKVDIVQGYRE
RSNVSLQEEFVDLIATQRAFQMNSKGIKTADEMWQIANNLRAK
>gi|260685649|ref|YP_003216782.1| putative flagellar motor switch protein [Clostridium difficile R20291]
MNDMKEYDFGKPQSYSRENLTCLNFLLAEFCKKYKNYIIYELKCNSSMIVDSIDQVNYQTFLDRVTSSCV
VVQNAMEPVMKNFSFRIDRSVADMWIDITSGGTGVIKDNDRELTELDKKVLLHLMDDLVRNMHLFEGFEN
IQVLDTHTHINLPQLCSPTAPVCVVDLKVLNDNEYIGSVSLCFPYNGLEALLESISVIEFFDNDVGDDSE
EFTKKIYNSVSNIELSVIAEIGKVSINVEDLLKLEVGDVIVTNKKINDYIDIFVENSKSYTATPGFISSK
KGVKINDAVGKEV
>gi|260685650|ref|YP_003216783.1| putative flagellar motor switch protein [Clostridium difficile R20291]
MDNSNLISDEEAKMLLNDKVESEVDGDDELALDVSEVNRNNIQRILDLKLELSVVIGRTKMTLRDILNLH
KGSLIELNTLADQDVEILIDNKVLAYGKVVVVDLNFGVKITSIVSEEDMVKSLV
>gi|260685651|ref|YP_003216784.1| hypothetical protein CDR20291_0276 [Clostridium difficile R20291]
MVLILNLNDIKKDILKLNKKDSCSLYNESINNINNNCISTGLKFLKQARDLNPDDVDILNLTGLVNLLKC
NFDDAVESFYKSSLCEKTALCEKYINMLTSEEFLIFFEKYNQLIRLINKGMYKEAIQGFKLITDQYCDLI
EPYELLALLYDKEEEYIKFDECLEVLKIIDKENYLLNQENNTLDMYNSANIQTKSNVKVDDYKNEFLHKS
SSNHKINDYNNVTKEKSSSKNQKSSDSNKKKSIKKNKYLYIAIILGILLVGQSIYSSYKMNNLTDKISKN
NETKNEESIDSNLTKKENNIEENEDMSKASNINKSNKNINKEADVKSKKNTVENEDDKDSDLFTEDELMS
KANTLKSEKKTKSSIQLYKKVADIGENKGNTSEATYQVAILSEKLKDYKTAEEYYKMYVENYSEKDAYFD
ESYYNLGMMYYNNGDLKNSKLTLKKLVNKVPNSMYNNSKVKEILKEE
>gi|260685652|ref|YP_003216785.1| chaperone protein (heat shock protein) [Clostridium difficile R20291]
MEFEKGSISIHTENIFPIIKKWLYSDKDIFIRELISNGCDAVSKHKRLVSLGEISENKSSDYKITVSVNK
GEGTLKFIDNGIGMTEEEIKKYINQVAFSGAEDFFNKYKDKMEESNDIIGHFGLGFYSAFMVSKKVQIDT
LSYTEGATPVRWISEGGTEYEISESDARNDRGTTITLFIDDDSKEFLDEFTVRGIINKYCSFLPVEIYLE
DVERLEREAKEAEEKAKKQKEDGKEEIVDAKVIEPLNDTNPLWLKSPKDCTDEEYKEFYRKVFNVFDEPL
FWIHLNVDYPFNLKGILYFPKLKNEFELTEGKVKLYNNQVFVADNIKEVIPEFLLLLKGVIDCPDLPLNV
SRSFLQNDRDVSKISKHIIKKVADKLKSLCKNEREEYNKFWDDIQIFIKYGCLKDESFYEKVKECILFKT
IDDEYITIQDYLEKCKDKHENKVFYVSDKEQQSQYIKLFKEYDLSAVVLNSSIDTHFISFMEYKENGVKF
NRIDADLSDVLKDKNENKDSEENKEEIAKIEGLFKEAVGERVKNYSVEGLKNEDTPAMVLVSEQSIRMAE
MQSRFAGMDLGMNFEEEKTLVINENSPIIKKLVSLKDDEEKKDKITLICNQIADLALLSNKELKPDELDS
FVQRSNKLMSLLIEL
>gi|260685653|ref|YP_003216786.1| putative 1,3-propanediol dehydrogenase [Clostridium difficile R20291]
MNFNYNLPVNILFGRGRINDVGKEVSKYGKKVLIVTGKNSTKKTGLLDKTIDLLKDSKIEYEVFDRVEQN
PLITTIYSGVEIIKSTGCDCVLGLGGGSIMDAAKSIAFSYKNPGDLNDYIFGIRQGEEALPIILVPTTSG
TGSEGNCFAVLTNSETKDKKSIKKNSMYAKASIIDPELMVTMPKHIIASVGFDALAHNMEAYLSNGRNPL
ADVQAIYGIELISENLIKVYNDVNDLEAWEKITLASTIGGMTIGTAGTALPHGMEHPVSGLRDVMHGKGL
AALTPTIIESSWDIDIERFGNISKVLGGTCAEDCSDAIRNFLKKIDLDIKLSDLGIEKSDIDWLTDNCMK
ISVANIKRHPKYFNKEQIKEMYHKSL
>gi|260685654|ref|YP_003216787.1| spore photoproduct lyase [Clostridium difficile R20291]
MFNPKRIIFEKGTLDTDVGKKIYNKFRDNKDVEIINISSNRIKEHIPGENLYEQYRSGKQTMVVGIRKSL
KFQTCKPSANYQLPLVSGCMGRCEYCYLNTQLGDKPFIRVFVNVDEILEQTKKYIEDRKPQVTIFEGAAT
SDPVPVEPYTNSLKKTIEFFGREEKGRFRFVTKYSDVDSLLDAEHNNHTEIRFSINTPRIINEHEHYTAS
ANKRIESAVKLARAGYQIGFIIAPVFLYEGWKEEYKNLIISIKEALPKDFDKKIIFEVISHRYTTKAKNR
ILEIYPDTLLPMENEDRKFKYGQFGYGKYVYDKEQLDDMKEFFLKEINGVFKNSLIKYII
>gi|260685655|ref|YP_003216788.1| AraC-family transcriptional regulator [Clostridium difficile R20291]
MHAWESIQITLDLIEANLSEEISINELANKANLSPFYYQRLFKRLVNKTVMEYIKLRRLARASEYLAEHK
NRILDVALNFGFASHETFTRSFKKAYGLTPEKYRANPVKLNHFIKPELILNYAMVDEGVPLIADDIVIEV
NRKTLSNPRTFVGIEIEVPICQLVGGETTGIAIVEELWMKLGSQRHNIPNQIPGGNEFAALYMGNAKEGN
CMYMAGVEVESGTSVEGYNTFELPAKEYLVCGFEAENFNELVNSAVFKADKFMERWMKKHNLTTTDFAIE
MYYPTTPEAAYLEHWIVPVPIEQ
>gi|260685656|ref|YP_003216789.1| hypothetical protein CDR20291_0281 [Clostridium difficile R20291]
MNWQDAFFQDTKPTFEQINEFINNPLWDKLNKTLVSTYNVEPKLEYSKCSMQRGWNVKYKKRGKSLCTLY
PQEGYFKALVIVSESNRVEVDLFINTCCDYIKKIYNEVNFFNGSKWLMIQVDSLLVLNDMLELIKFRA
>gi|260685657|ref|YP_003216790.1| putative transcriptional regulator [Clostridium difficile R20291]
MSINTEKNITKNVEELTCPIRYALDIVGGKWKLPIICMLAVENPIRYSSIKRKLDGITNTMLAQSLKDLE
STGIVHRKQYNEIPPKVEYTLTSKGKSIVPILQQFANWGATNMQEKNTCGLSCKECRKIK
>gi|260685658|ref|YP_003216791.1| hypothetical protein CDR20291_0283 [Clostridium difficile R20291]
MKALEFLNKAGVYYLATVDENNQAHVRPLGFVMEYNGKLTFCTSNQKDMFKQLIFNPKVELCCIDQNLNT
LRILGEAVFVTSKETQAKALEIMPSLGQMYSVGDGKFEIFSIDKAKVSCCSMSGKKIDVEL
>gi|260685659|ref|YP_003216792.1| hypothetical protein CDR20291_0284 [Clostridium difficile R20291]
MSKYSSLWEYVKKNNSQSFKLTFEEIKDIAGIEIDHSFLKYKKELNEYGYQVGKISLKEKTVIFNKID
>gi|260685660|ref|YP_003216793.1| putative phosphoesterase [Clostridium difficile R20291]
MSNYVTIDFLSYSFYNINYVTLIFYRGGIYMNFLSDLHTHSIVSGHGYSTLLENINYCKENGIKILGTSE
HGPKMPGSPHRWYFHNIQNIPRIINNIIILRGCEANILDIKGNIDLEPFVIPRLDYLILSFHEAVFSPNT
LENNTKALINAINKHDNIEILGHLGNPNYPIDYELIIKLAIEKNILIEINNCSIKGVSRNGSSDNCKYIA
TLCKKYGAKIILTSDAHICFDIGNYEYSENILKEINFPDELIMNYPKKLINHFHQKGKLLDVDYTNI
>gi|260685661|ref|YP_003216794.1| putative transcription antiterminator [Clostridium difficile R20291]
MTQKKLSRKEKVLICLKRLTEEHLNFNNGIRFGFDAEYIATEVGINRSNASKELNQLIKESIIIKIKGKP
VQYLYKESIESILGKKLNKGIFDNINSINEYSENDSIKDEYILESIKKENNIFNLVGCDGSLRSQIEQAK
AAVIYPPKGLSTLIIGPTGVGKSIFAEYMYKYSLTIKEDSDNAPFIIFNCADYSDNQQLLLAQLFGYVKG
AFTGADKDKYGIVHEANNGVLFLDEVHRLSAEGQEMLFLLMDKGIYRRLGEANKVHECRVMIIAATTEDP
ETAMLETFLRRIPVTIKIPSLEERGFQERMKLICYFFKEESVRIGVKLKVSKEVIKAFILYKCKGNIGQL
KSDIQLICARAFLDYMTYKRECVYVRLSLLPNNIRESLYGNNRKEEFVQNFSFIGKDDIIFLPEEKDFES
ENLLIENKKYDLDFYGMIKETWNKLQQEGIKESQIRSVIDGDIQKYSYNLMNTFIYNNSNQTAYNNIVND
SIATTVKYILQKHDKWSKREGLDKLIKAIALHIQNLIERIKIGNIVKHPNKDEIMKERAYEYNIAKEILS
NMSLMYGVEFPEDEAIFLATFLYLSYVGLNEESIAILVIMHGESTASSMVNVANTLLDCNHAVAINMGLE
DRVQDILVQAVEIANKIDKGKGILILTDMGSILTFAKVIRDATGKEVKAVDMVSTPIVIEATRKALTPEM
TLEKLYFNIIESIKKHYGDMEVTYAEKDNGGRYFDRLLIDNISKTLTFLNGEKAYFILKEVINRISEHYS
LVIQDELLVKFIFHCSCMIERVIIKESLVYKSYEERISRNKELYLVIKESFKLVEETFDIIISDMEYANI
LDIFESQYDTDKFKS
>gi|260685662|ref|YP_003216795.1| PTS system, IIa component [Clostridium difficile R20291]
MKLVIGIIVMTHGSFSEEIIKSCELIAGPAERTAAIKLNRNDNIEDLNKNFVEKLNELDEGDGVLVLADL
LGGSPSNVASLNLKKGGKFHALTGVNLPMLLEALINREGKSLEELAEACIEAGQTGINNINKVLSSM
>gi|260685663|ref|YP_003216796.1| PTS system, IIb component [Clostridium difficile R20291]
MSLVKYCRCDDRLIHGQVIYKWVKHLGVKKIVVVDDETTNDVIAKGLIKMAAPKNIDLSILTVSESRRYF
YNNQADDNVFVLIKNLDTANRMIEEGINIKKLIVGRIPTGIGKKKISQNVYINKKEFLLIDEFIKKNINV
SIQMVPDEEEVELNQNINRYKGEFI
>gi|260685664|ref|YP_003216797.1| putative PTS system, IIa component [Clostridium difficile R20291]
MNKYKVIILCHGTWGKVLVEETNKNFGLSNQYEVLSLSSEKDVSVFMKEVEEVVDKEDVKIIISDLYGGS
TSSVAIAVAIRRGIDAINGLSLQTILIVDEELSKEDKLHTLPERIVKKNNNLCVDLIKEFKKI
>gi|260685665|ref|YP_003216798.1| PTS system, IIb component [Clostridium difficile R20291]
MAKITLVRVDHRLIHGQVITKWVKIAQAQKIIIVDDFLGQDEFMADIYKMAAPSGVEVVILTAEDAGQAF
QNNTLGDKNIFILFKNVDMANKAYKAGLKYEKIQLGGIPNEAGKKMVFTAVSLGNEDVEQLNELNENGVE
IVLQVIPEESSMTYENALKKFK
>gi|260685666|ref|YP_003216799.1| PTS system, IIc component [Clostridium difficile R20291]
MESVLMLAIVTGLWYWFAAGLAGYTLFSTLKSPLFIGFSLGLLWGDVTTGMIVGASIEMVYLGMVAAGGN
IPSDKCLAALIAIPVALQTGVNAEVAVSIAVPLGVIGVLVNNLRRTGNAVLVHKADKYAEEGNTKGIWRC
ATLYSLIFGFVLRFPIVFVCNFFGADLVQSLLDVIPQWLMNGLTVMGGILPALGFATTIFTIGKNKFLPM
FIIGFFMVQYFEISITAAAIFGVCIALLITFMKEDKRVGEV
>gi|260685667|ref|YP_003216800.1| PTS system, IId component [Clostridium difficile R20291]
MQEIKNKEVKNGQGPTEVNKTRVLTKKDVTKTYLRWWWTAELSNSFERMQALAVCASFTPALEKLYKKKE
DLVDALKRHLQFFNTQAIWGGLIHGTVLAMEEEKATEGKIPGEVISGVKNGLMGPLAGIGDTLDFGTFQT
IFLALGASFGAEGSVIGAFFPIMFSILLFCEGYYLFHLGYSLGRDSIKKILSGGIVNKIIDGASILGMFM
MGALSATTVKLSTPLSFDIGGKAIVVQDTLNMIAPGLLPLGVVFFVYWGMKYKKWTITKLLVILVVLALV
GSFIGIF
>gi|260685668|ref|YP_003216801.1| hypothetical protein CDR20291_0293 [Clostridium difficile R20291]
MSEKMYTEKEYLEGIRGATGERAVWFYLLMKEAEKLGANPDDICKEAIYGFGKMRGQKYNVADTPGKMAE
MLYNSKGQKVFEMELVENTDENGVLKFHHCPLDAAWKEYGLTKEERKEICRLACYGDYGRVDCAQGVKLD
FAQKCAHDDEVCELVFTKK
>gi|260685669|ref|YP_003216802.1| putative peptidase [Clostridium difficile R20291]
MDISRSVDNSLNRTIEFLKELIKIDSQQGEPISQCPFGIGPKKSLDKTLDYCASLGFSVKNIDNYIGYAE
IGEGEELIGIPMHLDIVPPGEGWSVDPFSGAVIDNIIYGRGVIDNKGAVSMLIHVLKNIEDMYPTINKRI
RLIFGTNEETDMKCIKYYLDKGEEIPSMGFTPDAMYPVVNGEKGRVHIRIEKEIKIDKSKPYIIVRGGTK
ENVVPSHCTAKIINGIISELTTKGVAVHASNPEKGENAISKMVIKIVEDNMDFQHREDIELVSKYLCSDY
YGDALGINQYDEVFKNTTLNLGILKVNEEKIVCELDIRYGKNIVLNNIIDRFKKVFCNGWKIEVIAHKDL
HYVDESNLVLKKLLEAYEEVTDENGYTIAMGGGTYASWFKDMVAFGPKFLAYKTGGHGVDERVPINHIRK
NMEIYTLALIKLLEL
>gi|260685670|ref|YP_003216803.1| DNA-binding protein [Clostridium difficile R20291]
MNELNIAKTLILKRKEKGITQDELANYIGVSKASVSKWETGQSYPDITFLPQLATYFNITVDELICYEPQ
MMKEDINKLYNKLCKDFTVKPFDEVMDEIREIIKKYYSCFPLIFRMGLLIVNHYDIVDEKKRELLISEAL
EIFIRIQETCNDIDICRQAKSMEATCYILLNQPIQVIDLLQNSNFPMINESILLAQGQMMNGQMDEARET
FQLGAYQNLISLVQNLVGILQNADKLQMKEIERRILAISDIFELDTLSPAIMLSSYLTQTQINLIHGDNE
GAIKSLRKYVDLATRDIYPIIIHGDDFFNKLDRWISEIGTGITRDDTIVKAGIVAAIKNNPMFSLLSENK
EYKFLIEKLSLLEE
>gi|260685671|ref|YP_003216804.1| ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MMNIVSINGLSKGFGNRKIIDNLNFTVPEGSVFGFVGKNGAGKTTTMKMVLGLLEPDSGTIDVCGEKVTY
GRTSSNRHVGYLPDVPEFYNYMRPLEYLSLCGEITGLSKKEIKIRSEELLSLVGLGNEKRRIGGFSRGMK
QRLGIAQALLSRPKLLICDEPTSALDPVGRKEILDIMLKIKDSTTVIFSTHILSDVERICDHVAILNKGS
IALSGTLSEIKSMHGKDRLLLEFASNNEIQKFKSSGGIKSLLKDSEETNMEIVLHGKDIKAIQKTVISTL
AEMNLCPVKMELIELSLENLFLEVVK
>gi|260685672|ref|YP_003216805.1| putative ABC transporter, permease protein [Clostridium difficile R20291]
MREYIAFTKKEFKENIRNYKLLSLTILFLVFGIMSPLSAKFMPDLIAHFAPTLKVTTAPTALDSWTQFSG
NISGLGTSLTLIVFCNILSNEYSKGTLVIMLTKGLSRSSVVLSKFSIAVIIMTIGFWLSFLCTYGYTMYF
WPTANLNHIIFSAFNLWLISIMYISILILGCVLFRPAFASVLLVLAATAILSLISIPKQIAPYTPNFILS
KNIDLVSGKVTPPEFIIPIIVTIVISIVCLLLAVVLFNKKAV
>gi|260685673|ref|YP_003216806.1| putative iron-sulfur-binding protein [Clostridium difficile R20291]
MEKSKVYFCDLYSNSQNKNVPNNVRRLFDEAGFKDLIEKNDQVAIKLHFGEKGNTTYMSPVAVRQVVDKV
KDCEGKPFLTDTNTLYTGSRTNSVDHLTTAIENGFAYAVVNAPVIIADGLYSRNYENVKIDKKHFESVKI
GGEIYNSSAMIVMSHFKGHEAAGFGGALKNLAMGCASAAGKQMQHSDVTPVVKEKKCVGCGKCVNSCPTK
AISIVDKKAVIDSDVCYGCGECPTVCPTRAVTIQWESDSDVFVEKMAEYAYGAVSNKKDKVGYITFVMNV
TPLCDCVPWSGRPIAHDIGILASTDPVAIEQACYDLICKEMGHDVFKHEHPHVNGTRIIDYACEMGMGSK
EYELIKL
>gi|260685674|ref|YP_003216807.1| hypothetical protein CDR20291_0299 [Clostridium difficile R20291]
MKIYYEKENSKKANVNNIPSVFAFNFLRNFLTSKEYEETRKEYFINNLTKSQVNQAMKDLKWLFREYEGL
EVITMESLDGVKTRIVL
>gi|260685675|ref|YP_003216808.1| putative biotin synthase [Clostridium difficile R20291]
MEKYIIKLKNKVLREKEISYEEALNLISLDTNNKNDFDILLKSANEIREYFMGRKADLCTIMNAKSGKCS
EDCKFCAQSSHYKTGVEEYSLLDYNEILNRAKEMESKGVHRFSLVTSGKGMSGKEFNNILNIYEGLRENT
NLKLCASLGIIDYEQAKMLKSAGVTTYHHNVETCRDNFHNICTTHTYKDRIKTIKDAKKAGLDVCVGGII
GMNESEEQRLKMVFEIRELNVKSFPINILNPIKNTPMENYDVLEPMEILKTTAVFRFIIPNVYIRYAGGR
LSLKGYDKVGFNGGVNSAIVGDYLTTVGSGIENDKKMIIEQGFEL
>gi|260685676|ref|YP_003216809.1| putative ribose operon repressor [Clostridium difficile R20291]
MNFLSITIKEIGELAGVSKTTVSKVINNKDENISQATREKILKIMKEKNYVPNKLAQSLVTKKTNTIGLL
IPDIRNPFFTDVSRGVEDKANEEGYNIILCNTDEDAKKEYEGIRTLSERMIDGIIFAASSNTNWKEANYK
DIKIPTVLIDKKISMNKETLKGIVKINNFEGAYIATKHLLDIGNKKIIYLSGPLQNEIAVDRLEGYKKAL
IECNLSYNSAYVFEGKYKIEWGQEFIKNLEKIDFDAIFCANDLIAIGVIRGLKERGLSIPNDVSVVGFDD
IQTSSLISPSLTTVKQPSYDIGYKASEILINCLRGDKKESFDELIFKPELVIRDSTKESE
>gi|260685677|ref|YP_003216810.1| putative ribokinase [Clostridium difficile R20291]
MGNIVVIGSVNMDMVCSVDKRPEKGETVLGNSFFTSPGGKGANQAISASKLGANVKMISCIGEDGLGEEL
IRNFRTNKVDYSLVSRNNHKSSGVAVITLCENDNSIVVVPGTNELVDIELIKKNEEEIKNADIVLLQLEI
PLKTINYVVNFCFENRIKVLLNPAPAVKLNEDIIEKVTYLTPNEHEYKIVFDTNEGIEEVLKKYPNKLVI
TEGKNGARFYDGEEIKHVSCISVDVQDTTGAGDTFNGALAVAITEGKKLYTAVEYAVVVSGLSVTKLGAQ
SGMPYKEDVEKYLNNK
>gi|260685678|ref|YP_003216811.1| D-ribose ABC transporter, substrate-binding protein [Clostridium difficile R20291]
MRVRKILSLGIAGILAIGMLTGCSMEGPSKSDNKGGSDKKDLTIGVSTITLQHQFFIDIDEGIKEKAKEL
GVKVIVNDPDQDVAKQTSAIEDFIQQNVDGMIVLGTDNSAIVPAVEGAFEKMPVVTVDAVLNTENITSYV
GTVSYDAGKKLGEYTKKYIDEKLGGKSEIAIVTDLKSQIQMQRIDGFKDALKGSANVKILNSQPGYDREE
SLNTVENLIQSNPDVDIIYATAENSVLGAKAALESAKNKDVKIVGFDLTEEASSGITDGTILAMIQQQPK
EMGRLAVEAVVKAIKGEKVEKNIPVPALLYDKENIKDFKN
>gi|260685679|ref|YP_003216812.1| ribose ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MSNIILKLSNIAKEFPGVRALDNVNFELFHGEVHALLGENGAGKSTMIKILTGAHSKTSGKFIFEGKEIE
NISPDISKKIGINAIYQELTVFDELTVAQNIFMGKEINGKVLTNDKKMNEEAKKIFDNMGIDINPNSLVK
ELSIAQKQMVEIARVLSSETKVLIMDEPTSSISKKETEILFRLINDLKESGVSIIYISHRMEELFEICDR
ITIMRDGKTISTLNTKDVSSEEELVNLMIDRKLDQFFPKRKVEIKEEIMRVENLTKNNVFNDISFNIRKG
EILGIGGLVGSKRSEIVEAIFGLRTYDSGKIYLNNEEVKFKTPSDAIENGLGLITEDRKGTGLFLQMSVK
ENTTMAGLKKISKFKSIIDRKKEKEILEKYIEALKIKTPHMNQVIQSLSGGNQQKAIIARWLLLQPDILI
MDEPTRGIDVNAKAEIYNLMGDLVESGVSIIMISSEIPELISMSDRIMVMREGHISGFLEGEEMVENNVL
KLAFGGKINEFNN
>gi|260685680|ref|YP_003216813.1| ribose ABC transporter, permease protein [Clostridium difficile R20291]
MSSITKHKEEKSSPLLTKLTSVFRDQGSAAVGLVIIFIIMSVASSNFLTLDNLINVGRQISINAILAVGM
TFVIITGGIDLSVGAVIALVGTFWATTVVNYNAPIWVGMILALAIGTILGVIKGAIISTQKLPPFIVTLA
MLTIISGASFVFTGGRPISVNTDAFKMLGRGYIGPIPIPVIIMIIVVIAGHFLLKRTNFGRHVHAVGGNE
EAARLCGVKVNKVIVKVYALAGLLTALAGIILSSRLASGSPTVGDGAELDAIAAVVLGGTNMMGGSGSIV
GTCIGVGIIGILGNGLNLLSVSSYNQMIIKGLVMLFAIWINNIKLKKSAKSK
>gi|260685681|ref|YP_003216814.1| putative acetylornithine deacetylase [Clostridium difficile R20291]
MKKILLDTLNSKKQEYIDYLKELVSIKTEDVGHGILGGFEKEGQEYIEKLANYIGFSVDRQEMSEELIKK
AKNIYKEGNLGHNYQDRYNLICKYSDDLPGKTIVFNGHVDTMPPGDISKWKYNPYRATEDNGKLYGLGTA
DMKSGLIASILAVKLIKDSGLNVPGNVKIMSVVDEEGGGNGTINAVMNGIGGDCCIICEPSEQNLIVAHM
GFVFFEVEVKGVSLHCGSKWEGVNAIEKAMLLLQDIKELEHNWLMIYKHPLLPSPTINLGVINGGTAGST
VPDKCVFNLCVHFLPNIMSYEQVVNDVTNVIMTRANGDLWLKDNKPNINIYQSGLGFQMDKDSDFVVNAH
KILEETLGKKLEIKGSTAGNDARLMKNLAEIPTLILGPGSIEQCHSIDEYVEIKEYLDSILMYASLILNL
>gi|260685682|ref|YP_003216815.1| hypothetical protein CDR20291_0307 [Clostridium difficile R20291]
MKKVLIVGESWVKNITHIKGFDTFVTTHYEEAVKWLKEAIESGGYETVHMPAHVAADSFPYKLEELNEYD
CIILSDIGSNTFLLSNSTFIDCNSNPDRLELIKEYVNNGGALIMVGGYMSFTGIDAKARFGETAIKDVLP
ITMIDKDDRVEKPAGIIPEVIDSEHPVLKGIPTEWPKFLGYNKTVARDNCPVLATIGGDPFVAVGEFGKG
KSAIFSSDCAPHWGPKEFTDWKYYNKLWVNMLDWLTC
>gi|260685683|ref|YP_003216816.1| putative aminobenzoyl-glutamate utilization protein [Clostridium difficile R20291]
MDNLNKKFLMEYIDEIQGELRDISDKIWKNPELQYKEYYASNLQKECLKKHGFSIEGLEGMDTAFVASYG
EGRPVIAVLGEYDALDGLSQKVSTTKEPIVDGGAGHGCGHNLLGTGSIGAVIAVKELIKLKKLKGTIKYY
GCPAEEDLSGKVLMIKKGFFDGIDCAFSWHPFDINTPIRIPTLANYSVKFRYNGISAHAAQAPYNGRSAL
DAVELMNIGCNYLREHIFDNCRVHYVTTNGGKMPNIVPDFAEVWYYIRGVKMEHVRDVFGRIVDIAKGAA
LMTGTIMEYDIISGVYDYIPNTILTDILSQNMKLVGVQNYNEDDYYFADKLAETVSIDKRSSVSSVLSGN
KDITKMNLHDEVTDDTFTHNNCISLSLDIGDVSYIIPTAQCSCSVWPIGISAHTWQSCASAGSDMGFKAM
LLASKSISCSINDVMLDELVINKAKKELKDTVGSFEYTPII
>gi|260685684|ref|YP_003216817.1| hypothetical protein CDR20291_0309 [Clostridium difficile R20291]
MNNLDKNNVNEVLDMLLRTRRSIRSFTKEVPSKGLIEEIIETGRLAPYAILSVAKQTDFRHFFVISNNSL
QMNKIKTILVDVIKTQISVNEKKAKNNITLQSFITSLKMQVEKGVLGIGTAPYLIIVAERRGIPPIEQKS
LSHVMQNMWLKSTALGLGFELVSVIGRLSDNKDFCDILGVPTGEYGFDACAIGFPTTSVTREGRAIPHPS
IKWI
>gi|260685685|ref|YP_003216818.1| tetr (putative transcriptional regulator) [Clostridium difficile R20291]
MKKVSIDRRTIRTKKMIRSALAELIDEKGFNNISVTDLTQRADINRGTFYLHYVDKYDLLERIENEIIQE
IEEETKHLDSSNMMEIDTSSEPLPFMVKLFEYFRKNSVIIKSILGPKGDPTFERKIKKFIETNLFEKQKL
INFNIDEAIISEEYFIQYILSADLGVIQYWLEKNMKESPEEMALILARMSLLGPLRAVGIRKDS
>gi|260685686|ref|YP_003216819.1| hypothetical protein CDR20291_0311 [Clostridium difficile R20291]
MHYKINELENKYNLYNKVVQKGVFMFGYVKINKMDLTFREYDYYKAYYCGLCKYLKRNHGEISRFSLNYD
ITFLIVLLTAVYNPESISTEEVCIVNPFKKKKVITNDITEYAASMNILLTYYKLEDNLMDDKRIKDKLAY
YIYKNKLKLAYEKYPEKAEYIKQQLNELNKLEKDKNINIDEVSSIFGNIMGEVFVYKKDENERNLRMIGF
NIGKYIYLLDAYEDLDEDFKKGRYNPFIEYIDKNDELKEKVKKIIVTSLGFLARGIDNLNLNKNVGIIEN
IIYSGVYLRYINILESRGGKNVQ
>gi|260685687|ref|YP_003216820.1| putative 'four-disulfide core' protein [Clostridium difficile R20291]
MYSNTYNNENFMRARAFIENSEFKKAYDFLKTLTDKCAEWYYLTGFSAMNIGYYEEGEDFLKRAKFMEPE
NSEYSDALRSYTQYRNDYSNRADNYNRRRRNDLDGCCCCCCDDCCCCLGDDCCENCAKLWCLDSCCECFG
GDLITCC
>gi|260685688|ref|YP_003216821.1| hypothetical protein CDR20291_0313 [Clostridium difficile R20291]
MINMSIKVAYGGVLLALNVILLTLTNIIPVNTLFIMGLASLLVSIVIMEWGFKSGIAFYIGSIVLGFIVM
ASKSQWIVYSLTFGIYGIVKYLIEKDRSIYIEYFMKLVFANIMILILYFLLRTIVYIPINIFIIGSFEIA
FIVYDYVYSSFIGYYNNRLRKMLFKK
>gi|260685689|ref|YP_003216822.1| putative phosphoserine phosphatase [Clostridium difficile R20291]
MKNIAAFFDIDGTLYRDSLMVEHFKKLIKYDIIDQKNWYKHARDTFMDWDKRQGNYDDYLLEICDLYVDS
LKGLDKTCINFTSDQVIKLKADRVYKYTRSRIEWHLNQGHIVIFISGSPGFLVEKMAKKYNVTDFLGSDY
VFENNIFTGTVIPMWDSISKNNAINDFVVKYDLDLSNSYAYGDTNGDINMLKRVGNPIAINPTKELLSQI
SLDEEISKNVEIIVERKDIIYSLSTDVNIVDI
>gi|260685690|ref|YP_003216823.1| hypothetical protein CDR20291_0315 [Clostridium difficile R20291]
MNFNFAKATNSRLMGSLGLIINWIDDENNHFCQYFLLDAEGLGLADYVSLNNPTQEEAYMEEERLMGGFG
SDRVELTKDESLFLVSYFGNKNLYYDKLLPGDKCEYIDIIKNYKTDLIIEKLYNKICKRVDEEVEFINYM
TMRFIAWDRESLKYFSGSDEIANMHITNINGTLLKNVVSDKGQGRYISEALYEDNDGYYICKIAFCISKC
YETGFRINSLLVTDKELMYDFEVFDEISKSEFVSVYSVNSPEEFAGVFYRENPFLLKSNMNEGIFFTRFN
FNNDHVKENVYIINNDMKAIYYLMGNKFFIGTYNENDCNYINEISQSNYSDYIKFEEKFFFEQNALYDFA
ESGSLDFDDFLE
>gi|260685691|ref|YP_003216824.1| putative spore coat assembly asparagine-rich protein [Clostridium difficile R20291]
MSNKKKKDLDTSYMPYLDPANYADYITNEEIPQDELRNDPQISNGYTKIPNNQNINNLYPNNVNHYPKSS
NSPNNLPNTNNTSGNMNYNTSATNNMPNNMNNNTGMPNNMSNNMNSNMGMPNNMPNNMNSNMGMPNNMSN
NMNSNMGMPNNMPNNMNSNMGMPNNMPNNMNSNMGMPNNMPNNMNSNMGMPNNVPNNMNSNMGYNMNNTM
GIPNFSCNQNMPPNVLMMIPGVICHNTMQGMPVVMPSTMPPNIYPTPYGSSNMSIQGIPQATNIEEFDEE
EM
>gi|260685692|ref|YP_003216825.1| ArsR-family transcriptional regulator [Clostridium difficile R20291]
MREEINDCNCNIVHEEIVTEAKSTMPDEEMLYDLAELFKVFGDTTRVKILYALFANEMCVCDIASLLNMT
HSAISHQLRVLKQARLVKFRREGKTVYYSLDDSHISQIFDCGLNHIRETYK
>gi|260685693|ref|YP_003216826.1| putative heavy-metal-transporting ATPase [Clostridium difficile R20291]
MEANNLIKKEFILGGLNCAHCAEEINNKVSKLQEVKSSNLNFINKKLIVNIKESFNEDTTIEKIIDIIDS
TEPGLDIQISSKENASSKTSIKKELILGGLNCAHCAEEINNKVSKLKEVESSNLNFVNKKLTVNISNNFK
EDDVINKIKEIINSTEPGLDIQVGSTDKVKGRTTEKSGAVNDTNKKELVPLIIGALVYIFGIYQTATGYE
SQFSNIVFIVAYVIVGGDVLLRAIRNISKGRVFDENFLMALATVGALTIGESSEAVGVMLFYKVGEYLQG
VAVGKSRKSITSLMQIRPDYANLKFNSEVKVVSPEEVNVGDIIVVKPGEKVPLDGVVVDGVSMLDTSALT
GESVLREVEKGDEILSGVINKNALLSIEVTKSFGESTVSKILDLVENSSIKKSKTENFISKFSRYYTPIV
VIAALLIAFVPPLVISGEVFSDWLYRGLIFLVVSCPCALVLSIPLSFFSGIGFASKNGILIKGSNYLEAL
RSVDTVVFDKTGTLTKGVFNVTKLNPEGISEEELLEYAAIAEVNSNHPIAKSILSYYNKKIDLDTIDSYE
EIAAYGIRVKHNGNFILAGNEKLMKKENISYSSAKEVGTVVYIAVDKVYRGYIVISDEVKEDSKNAIRSL
KAIGVKEVVMLTGDNEKVAKNIAQELELDTVYSNLLPNEKVDRLEDLYEGRTEKEKIAFVGDGINDAPVL
ARADVGIAMGGLGSDAAIEAADVVLMTDEPSKISKAIEIANKTNKIVWQNIIFALGVKIIVMILGAGGVA
TMWEAIFADVGVALIAVVNAMRAMR
>gi|260685694|ref|YP_003216827.1| hypothetical protein CDR20291_0319 [Clostridium difficile R20291]
MSVINSFILQYGLISVFVLIMIEYACFPLPSEVVLPLCGAIAARNHFGFLTILILSIIAGILGSIFCYTV
GNWGGKSIINKIIEICPKAKKGIFASQDYFNKYSSISVCVCRLIPLCRTYISFIAGIAGQNIITFVISSI
VGITIWNTSLISIGYIFSESWVRIMSHYNDYKFLVLIIPISIIFIGFVIKSFIHKKHHKIRL
>gi|260685695|ref|YP_003216828.1| hypothetical protein CDR20291_0320 [Clostridium difficile R20291]
MYKVIKTVEKIEGVVNLHKHYVFVGSRRFFYCLCLWYFFLKMYHVLHFVEDKFAYIEEKAAALKIKTTTL
>gi|260685696|ref|YP_003216829.1| putative ABC transporter, permease protein [Clostridium difficile R20291]
MWKLLWAECQKIRRSKIVWITFFASIMIAVIVFAGGQDVYNDPDLHYGLKSVYDGSRYIDNAGWYMDAVQ
PWSTFFVLPAVIALLGSYIICREEEEDTIKSLRLIPINETKLTIAKMIITFIFSILLYLLLFTITFLTES
VLHFSDLSTKLVLSCMKEYFLDGIGVFFAISPIIALVSRMKKGYWLALVFTEVYSIAGLFAGMSNVLQTF
FPIAAIFNISGYYITTGEKIMGSIISLLLCACLSAFILKGLKHNEKN
>gi|260685697|ref|YP_003216830.1| putative ABC transporter, permease protein [Clostridium difficile R20291]
MLKLIQTEFLKLRRRKLIWLMLLSALIMPFFALLYFNYFGKTGVEPTKFYKWSAFGYTLWIILPVVLGIF
CTMLIHEENQYDMLKQLWIVPISKMGYFFSKFFVVLIYSICFMLITAVASVLFSVLSGYVVFSWASILYL
LKKCLEIGVITAFVMLPILAIATSQKGYILPICITLVYAFSGFVIMTINMYLHPLSSMGVIIMRNKDIPG
LIFSQEINVPLAFLCICIWSIVSVLFASIALGRRK
>gi|260685698|ref|YP_003216831.1| ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MILTLYQLSFVETNLLKVRKLYMNDFVIETKQLTKIYGNQTVVDKVNLHVKKGRIYGLLGRNGAGKTTIM
KMILGLTSITYGEVDVFGENIKGCEKRVYPRIGAIIETPGFYPNLTGTENLEIFAKLRGTAAPNSVKRAL
EIVGLPYKNKKLFSKYSLGMKQRLGIANAILHDPELLVLDEPTNGLDPIGIAEMRKFIRDLSVEHGKTIL
ISSHILSEISLLADDIGIIDHGVLLEESSMSELEKKNSKYILLQVSDIPKTSLILERQFNTKDYSVQDDH
TLRLYNTTLDMGEINKALVMQNVTVISSQLCNDTLEDYFKKITGGEGIA
>gi|260685699|ref|YP_003216832.1| two-component sensor histidine kinase [Clostridium difficile R20291]
MNTSVYLLLILALSLIIIAYLVSVLLRVRIQLTLIKDALEDIKNGNLNRRILTDENDITKQICYDINEIA
INSQFQLIQQKQSEQAYKQLMTSLSHDVKTPLASLVGYLEAVESKIVVGEEKDEYIHVASNKAHYLKNFV
ENLFEWVKLDSKEQVFHFDIFDLNELSRNIISDWIPVLESSHFEYEFDIPEIEYFLRIDANAYTRIINNL
LQNIITHSSGNKMTLRIFENKEQAQIIITDNGKGISSDNLPHIFERLYQCDHSRASKGNGLGLAIAKELI
NAHKGNITANSTPGMGTEFTILLPKAL
>gi|260685700|ref|YP_003216833.1| two-component response regulator [Clostridium difficile R20291]
MVERKEERKYNMNSVLIIDDDKELCALMKKCVEQENLSAITAHCGAEGLHLLDKNRHTLSLVILDIMMPD
IDGFQVLKKIRETSNIPVIMLTAKNDEDDKVSGLRLGADDYLTKPFSINELMARVNSLIRRYTMLNPAFI
TDTDCIIINGMIIDKTNRIVSINNIPVQLTSKEFDLLAFLASNKGRVFTKKQIYTQVWEEEYAFDDSNIM
SFISKLRKKIEPDPNHPFYILTVRGVGYRFNKEA
>gi|260685701|ref|YP_003216834.1| hypothetical protein CDR20291_0326 [Clostridium difficile R20291]
MEYMSCPEVAKKWGISERRVQKLCEESRIPGVSKLGYMWLIPKNAEKPVDGRAKRRKEVQYE
>gi|260685702|ref|YP_003216835.1| hypothetical protein CDR20291_0327 [Clostridium difficile R20291]
MDIIDNLRVQGVDEKLIEDVLYFRNYYGLEKDLEYRVTKSKTYFYGKDILSMCIAAILEEENILLSGPKA
TGKNLLADNLGEIFNRPQWNTSFHINTDSSTLIGTDTFIDNEVKLRRGSVYECAINGGFGVFDEINMAKN
DAIVVVHSALDYRRIIDVPGYERVNLHPATRFIGTMNYEYAGTKELNEALVSRFMVIDIPPIEEDKLMMI
LKNEFSDADEEKLIHFAGIFLDLQLKSQNGEISSKAIDLRGLMASLKTIRRGLKPTLAINMGLTGKTFDV
YEKEMVGDVIKTRIPNKWESIDVFPISHI
>gi|260685703|ref|YP_003216836.1| hypothetical protein CDR20291_0328 [Clostridium difficile R20291]
MKWIYDDYEFENRANNLSWTIAGDYNESIDISEKDYSSKEIGLYFAIIAGARRKYVDWDIVKKYLTNRIR
KGYNKDIILGLIQVILNTIVEEKVIKDRPGIEDIRRNAYKDIVSRFTKIHNDNIMDKIKYTFVLYNMDKH
PALDSMTRRIVNDIRNIDTNQDMMEILKALDVIYLTYFEYILNGEENSLIDENNVESVEVNFDTFADFMY
EELYSDEEENIIESDIDSISSSMLVEGVGDFDDSKCSNSADRVIYVDEDTANKIYSKIEHYYGKTYLSKG
EIKKIETQNCRNVHEGCRIHFTDGVLRSECNNVFQLKYVTRQKENNLGKFREHARMYRQQIKRLKESLSR
ILIEENAKSRVYSDCGTILANRAWRVGRSNNNKIFYKDIENEKGKYVIDILLDASGSQSRNQGNVAIQAY
IIANALTEVGIPNRVMGFSSFLDYTILKRFKDYDDSIKNSENIFEYFCAGNNRDGLAIKSICSGLINRDE
ENKILIVLSDGRPNDVKIGKSSERTLRGEKAYRGIVGLRDTANEVRKARKQNILVLGVFTGKESELEAER
LIYGNDFIYSRDITRFSDVVSMYLKKIIRN
>gi|260685704|ref|YP_003216837.1| putative cobalt transport protein [Clostridium difficile R20291]
MKQNIKLGVIAALMLIVLTPVTSNAMHIMEGYLPVKWSIAWGVIFIPFFLVGLKSIGKIVKQDPKKKVLL
ALCGAFVFVLSALKIPSVTGSCSHPTGVGLGAIMFGPSVMFVLGTIVLIFQALLLAHGGITTLGANAFSM
AIIGPIISFLIFKALKKKDGNNAMPVFLAAAIGDLATYTVTSIQLALAFPDPSGGVMASAIKFLGIFFMT
QIPIAIAEGILTVIVYNLITENGEKSILENNDKGVKANEC
>gi|260685705|ref|YP_003216838.1| cobalt transport protein [Clostridium difficile R20291]
MSAKTKTKTNILLLLLVVALIIFPLLVNSGAEYGGADGQAESEITKINPDYEPWFSSPYEPPSGEIESLL
FSAQAALGAGVIGYILGVQKGKRS
>gi|260685706|ref|YP_003216839.1| cobalt transport protein [Clostridium difficile R20291]
MLIIDKYAYTNRLSKVNPNKKVAIGVIFLIASMVIKNIFVLSGIMILMSILVVCVAGIDLKNYLKLLRIP
MYFLFLSIGITLVNISFNKADLLYSFEIFSFNVGISKASIDMSIHVLFRAMSCLTCVYFCILTTPFNQLI
FFFKKMHLPDTFVELSMLIYRFIFIFLEEFSEIYKSQELRFGYINLKTSYKSLGILGSMLYKRLMTRYDD
MCISLDIKLYDGKFHIVGDNDV
>gi|260685707|ref|YP_003216840.1| cobalt ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MFKINNLTYQYEKNTNALLNINMDFSKGNVIGIIGSNGSGKSTLFMNLMGILKPTSGEILFKEEKLKYDK
RSLYNLRKNVGIVFQDPEKQIFYSKVYDDIAFAMRNIGIDEKIIKERINKALVAVNGIDFIDRPVHFLSY
GQKKRVAIASVIAMENEIILLDEPTAGLDPVSTRSIVDIIKGLNKDNIKIVISSHDMNLMYEICDYIYVL
DKGILIDEGKAENVFVNENNIIQAGLESPWLVKVHRNMNLPLFKKEEDLYKYWKERELNTNK
>gi|260685708|ref|YP_003216841.1| ATP-dependent DNA helicase [Clostridium difficile R20291]
MAVNRRRNMNLDTLNPAQREAVEKTEGPVLILAGAGSGKTKVLTTRIAYLIEDKGVQAPNILAITFTNKA
ANEMRERVEQNIGPETKDMWISTFHSCCVRILRKDINKIGYNRSFVIYDSADQVTLVKDCLKELNLSDKV
FEPKAVISAISGAKDKLYTPKQFKDINMADNRMVKIADIYALYQDRLKRNSALDFDDLILKTVELFKAND
EVLAYYRSRFRYIMVDEYQDTSKAQYELIKLLAREHQNICVVGDDDQSIYGWRGADIRNILEFEKDYDNV
HVVKLEQNYRSTQVILDAANKVISNNIERKRKKLWSEKKEGELIKIQLTGSEIEEADFIADSIAQIARKE
NRPYKDFAVLYRANAQARPVEDALNRSQIPYNIYGGTKFYERKEIKDLLAYLRVIQNPQDDISIKRIINV
PRRGIGLRTIEKIEDRANLKQESIYSVLIDIETNSDISTKARASISGFVDIIGTLRTIKEVYPVSKLIEK
VLDTTGYMDELVEIRNKNEKDLTGKGEEAQDRIDNLREFISIALEFESSNDDTYENKDLETFLTSIALTS
ESNDEEDNDRVSLMTIHTSKGLEFPVVFLTGMEEGLFPISRAIKSMSDSQIEEERRLCYVGITRAKEELY
MSLTEKRTLYGKTNVAIASRFMEELPEECIERLYKVKKELSYSKASYNMLDKYTKKYMSTISKSKVADKV
NATIKDSNKETNPDDIKLGSKVHHPKFGVGTVVSIIGTDVTIAFDQQGIKKINKEYTTLNIL
>gi|260685709|ref|YP_003216842.1| putative aspartyl aminopeptidase [Clostridium difficile R20291]
MDSINFAKNLIDFIYDSPSSFHAVESTKEILDKNGFEELVLNQRWNLRVGGKYYVTKNLSAIVAFVVNSE
DIERDGFRIIGSHSDSPTFSIKPNAEIEAEKSYLKLNTECYGGAILSTWLDRPLGIAGRVVLKGDSILKP
NERLIDFKKPICIIPNLAIHLNRSINDGHSYNKQKDMLPLVGMLNDTLEKDNFLIKQIASNLDVNMEDII
DFDLFLYEFEKGSLIGANDEFISIGRQDNLAMVHASLNALVNTKGQQGVNVMAVFDNEEVGSSTKQGADS
NMLLNILERICISMGKDREGFFESIYSSFMISSDLAHAIHPNIPEKHDPTNKPIMGKGPVIKINASQAYT
SDGYSIAIYKNICREVNVEYQEFVNRSDERGGSTIGPISSTHIDIPSVDVGSPILAMHSIRELGNVEDHY
SIYKTFSKFFEI
>gi|260685710|ref|YP_003216843.1| hypothetical protein CDR20291_0335 [Clostridium difficile R20291]
MKLGLCLEGGGAKGAYQAGVVKALYDGGINKFYSISGTSIGAINGYYLYTGNVDNLEKMWTNIKDIQNGN
VKIVNNTVDNSPAIDNLRELDDSNIEEMNFYVNYVEVDNKVVSEKIVDISKMPRNEAIISISYSGLLPSN
PNATLGFKEQFVKDVQEGIYDGFKLDGGLIRSALIEPLIGDNVDKIILISTKYNYELPEDIKKVYDEDKI
IVVRPNTQFAPKDTLNFDDEFCKTIYQEGYEIGKNILDRL
>gi|260685711|ref|YP_003216844.1| peptidyl-prolyl cis-trans isomerase [Clostridium difficile R20291]
MENKNPIVTIEMENGKEIKIELYPNIAPNTVKNFVSLVNEGYYNGIIFHRVIPGFMIQGGCPNGTGMGGP
GHSIKGEFSGNGFTNNLKHERGVISMARTMAPNSAGSQFFIMHKNSPHLDGQYAGFGRVIEGMDTVDEIA
SVRTDSADKPQTPQIMKSVTVETFGIDYSDVEKN
>gi|260685712|ref|YP_003216845.1| manganese-dependent inorganic pyrophosphatase [Clostridium difficile R20291]
MSLLVFGHKNPDTDSICSAISLAHLKNKLGIKATAYALGDIRKEAKYALDYFKVDAPEILDNVRIQVRDL
NYDKVVPLTPTSSILEAYNLMDEKNVKTLPVTYDDGTFAGIITMKEIAKNLLHQHFTTIHTSLSNICKNL
NGTILVDCGEDIKGRVVTLSFGMETLIETLKEGDIAIVGDRYDSIEYAIDTKVKLLILTNHTEISKDLLA
LAKINGVSVVSVESDNYKTSNVINQCSFLDSIEATENLITFKEDDYMDEIKEIMLETNFRSYPILDDDNK
FLGLVSKGHLLNPSKKNVVLVDHNEYAQSADGIEQANIVEIIDHHKLGGISTDVPMSFRVMPVGCNSTII
YQMYKENNVEIPYEIAGLLLSAILSDTLLFKSPTTTDMDKKACEELSKIAKVDMEKYAMDMFKCGTSLDE
YTIEEIVNMDFKEFNMSGHRVGIGQVFTLDIDSIFAKKDEFLSYINSTDYDKLILAVTDIIKEGSYLIYK
AEDSLIANAFDVEGVQGTFAPGVVSRKKQLVPNLTTAIKNFK
>gi|260685713|ref|YP_003216846.1| aldehyde-alcohol dehydrogenase [includes: alcohol dehydrogenase; acetaldehyde dehydrogenase [acetylating]; pyruvate-formate-lyase deactivase [Clostridium difficile R20291]
MHNYFREVFSMEKKEKVVEKSNVEVCSPEIVNSVETLRMRLEEIRLAQKEFATFTQEQVDKIFLAASTAA
NQQRIPLAKMAVEETGMGIVEDKVIKNHFASEYIYNAYKDTKTCGVIEKDEAFGFTRIAEPVGVLSAVIP
TTNPTSTAIFKSLIALKTRNGIIFSPHPRAKNCTIEAARVVHDAAVKAGAPKGLIGWVDVPSIELTNVVM
AEADLILATGGPGMVKSAYSSGKPAVGVGPGNVPAIIDESADIKMAVSSILVSKSFDNGMICASEQAVIV
PEKIYEEVKKEFKYRGAHFLNKEETEKVGKVVIIDGSLNARIVGQPAHVIAKMADVEVPKTARIIIGEVE
SVELNEPFAHEKLSPVLAMYKSKSFEDAVAKAEKLVADGGYGHTSSLYADSINHPDRVEKFVNAMKTCRV
LVNTPSSQGGIGDLYNFKLAPSLTLGCGSWGGNSVSENVGVKHLLNIKTVAERRENMLWFRAPEKVYFKK
GCLGVAAREFKDVMDKKKAFIVTDSFLYNNGYTKKLTDLLDEMGIKHTTFFDVAPDPTLACAREGAKAMA
DFQPDLIIAVGGGSAMDAGKIMWVMYEHPEVDFQDLAMRFMDIRKRVYVFPKMGEKAYFAAIPTSAGTGS
EVTPFAVITDQDSGVKYPLADYELMPNMAIIDADMMMEMPPRLTAASGVDALTHALEAYVSMLRTEPADG
LALQAGKIIFEYLPRAYKNGKNDKEAREKMAMASTMAGMSFANAFLGICHSLAHKLGAFHHVQHGVANAL
LINEVIKFNCAEAPNKMGAFSQYRYPDCIQRYAEFASFAGIKGNTDQEKVDNLIKAIDELKARVGLPKTI
KEAGVEESKFLETLDVMVEQAFDDQCTGANPRYPLMSELKEIYLKVYYGK
>gi|260685714|ref|YP_003216847.1| hypothetical protein CDR20291_0340 [Clostridium difficile R20291]
MLLILDNLNLNLDFDYRIIREENDDVDIFIDINYRSLDIDTDGSNLFNSRIQFPFVRALILRINKNNQCM
TIHLLRDIDLFSAFANFEVDYTDSIINIKNQNEKVILNKSIKK
>gi|260685715|ref|YP_003216848.1| ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MPILEILNLGKIYGKKETAVHALKDANLKINKGEFVAIIGPSGSGKSTFLHLVGGLERPSSGTIKVDGKD
ICCLSDKKLAKYRRQKVGFVFQQYNLIPVLNVKENIELPLKLDNKKVDEEYIEDIINLLGLSERKNHLPN
QLSGGQQQRVAIARALSAKPSIILADEPTGNLDSKTTEEVMDLLKSSIKKYNQTLIIITHNENIARKADR
IISIIDGELKLTL
>gi|260685716|ref|YP_003216849.1| ABC transporter, permease protein [Clostridium difficile R20291]
MKDNLKIALRYIISYKARSLAIALSIILATSLIVGIGTLSRSAQQAEVDKLKRETGSDHVYFKDINKNQL
EYIKSRKDIKNLGITSHYGYTDPNERLAINLEYANKNYLTNQSKLIKGHLPKASNEVVVEKWILNSLGLK
PEINQNITFKLYQKEKPETFKVVGILEDRPIEKNKGTCEIFLNLNESKLDKFSYAYIEFNNGIDINTSID
NIVKNTMLDENSVGKNKMLIESTRENGTLDNSSKYTAITMSLFSGIVIYSIYVISIYQRIQEYGILRAIG
STNFKIFKFMFYELFILALIAIPIGICTGIGGAQIFNRTAGNIQFEGNVTVTPFVIPDKIILLSIGSIIL
TILIISFFTYLKIRRISPIDSIRKTFGTDKNINKVNSLISKLTLNISVTKSISAKNIFRNKKGFIIIILS
MSLGGIMIIKENYKYSFSDIQNKNGQEETYMNADFILTNFFLKLNQSNKADSFKDIKGLNDNQIDKIKNI
NGIDKVKTASILDTRIEVDKLNGLDYYNIINSTPYYKDFPLFIKNKNTGKYTMKQKLRGYNDEMINSLEK
YLVSGSINLERMKKENLAILYVPQVSKTNKYKLSYTPGTETPAVDIKVGDTIKVKYPKGEIDQDLYIKLK
DNYEYLEYEFKVGAIVSYPFADNYLYSGDQGIDVITSNDYLKKLTGVDKYNVVYVDINKNANVKKINTLL
GEIGSESPGTTTANMLMEKENFDKMTARALTYAYGIVAVMFIISVFNIINNISYNLTSRTSEFGMLRAIG
ISERGFKNMILYEGILYGILSSVITIVVGLIIQFRMYYTYNFVSYGLGFSIDYKIYILVVLANIIVGILA
TYIPLRKINKISIVEAINITE
>gi|260685717|ref|YP_003216850.1| two-component sensor histidine kinase [Clostridium difficile R20291]
MENNFIFPIVILTLFIFSNLIMNKYRFYKELDILKRGILTFFVSCFVWILFMEGIEYIQLSLGYNFLLEG
VLNIILFLILIILSFYIGFKFIRLLDNNNKQEYKLQKLDSKINHKDNIIVKLRSQKHDYLKHLQVVYSLL
NTGLAEDAKEYITNISNSFKSKNSRYGKVSYLDAIASLKYEECLEKNISFDVYIQDFMDNLEIEPNDMSS
VLLNIIDNAIESLSAIQKEKKYIRLHAYEDEFQYIIAIKNNGPKIHNVESIFLDGFSTKEGQDRGFGLYL
VKNILDKYDYSILVNSDDFLTEFVILIPKYY
>gi|260685718|ref|YP_003216851.1| two-component response regulator [Clostridium difficile R20291]
MIKVLICDDDKIVRDDIANIVKESGYVDYVKKVKDGIEAIEFIKSEKIDLLIIDIDMPYKNGIDSAKEIL
SIDKDIHIVFVTGFADYSLESFKVHPIDFIVKPFKKEKILDSINIAIDHINSHKIAKNNFIEDTLFVYKI
RKQIHMINFDDIVMFEKNSRAINLYTRDEDTIKFYENFDDLKKRLPPNFFMTHRQYIVNLRLIHKVIPIN
KSSLEIKFINFQESATLNKSLEKDFLYRFYRVKRF
>gi|260685719|ref|YP_003216852.1| hypothetical protein CDR20291_0345 [Clostridium difficile R20291]
MLERTRVEKNPKIIENFKNNFTKSSSKQYYDLAKSLWDCIENSSYYYREPEDKFLNMIKKYYNCHYYEIK
NMDELLSGPLKNALELIFTSEQVEELCQLIKRKMDYTYSGGYYRKGYRSNKLVDYFRGIIRFISNYVDLI
YYDFSVIDYLTLPNKVLYYDSIMSDKIALEIDKGNQKVTSALEEVIFGENQTALLTRQMIIGIMKSHSDK
CYEMLSKLLLAAKQQEGLRQQIVESLDEGTISASIYMLKTILDNNLERFSSVIRALDTWTGLGFSDQKPG
IIRKCLELSYKSLTDEKFRIESINSNDNLEIYFALWATATYNIYDSYSLIENLLSCQEKYKKLVALYFLS
HTESTYFKHSIASKNIKGDDLEILAWVITNFYVEGSVGYYYSWQNRETNFDLSNTPIDKDFDARKEQFES
LKHTLEILNSKTKSFSGSVFPWTWIEISSHEILKCMMTLTAYDMNAQFIDVLMENCHLMSSDLRASLIVN
FVNEPKTDRQREFLLECLSDKSVSNRETVLSLLRKLELTDVELDKITNLLSLKTSSIRQTVIKILLEQDD
SNLENIASSLIKSSNSQKCLGGLEIVNLLKDNSDRQELYNKLILLIEDIDKSKKNTSQVQILIDNLLGKA
KNDYCKENGFGIYNPENKVQIPEQFDFKDDSNSSSKLNKIISNISLSTSEDSVSVATKKEAKKILDTDIN
KIIKVYEKFDELITENADYEYEVERWSGNVDKVLLGYSTYNLTPIKYKVSNDTLDNYPLAELWRETSKKL
DLDYKLILDILFYSISTCGYNETEKSWFSSIYSNVLDSKKQNKIYTKLEKFKFNGLTRKLLRVLLNEFDH
KEIFNYCLEIYYKLRNLLTIEQCKKQRVEFTKNYYRQNEYCPALNAPILNYWLDKAHSFIYDDISFTKFF
YTTFSNYQLLEYKFPFYTSINVFARAHELGLMTEEQVNREMISGYNASNIIRTLTNPRWAGDTLEKYPWL
KDNLKTVTNRIIEIESRRGDMPTEVSHLANNIQYFEGIDYFVNILVALGKETFQRGYSYGSNYSKKDVLS
SLLKNCYPTKEDDSKKLKSLLKNTDITELRLIESAMYAPQWVNIIEKYLNWKGLKSTIWYFHAHINEGFS
AQKESEVALFSPISPRSFIDGAFDVDWFLDSYKTIGEERFNILYKSAKYITSGGNSHRRAQLYADATLGK
LDKDMLMKEIETNRNQDKLRSFSLLPMKKGDLKEATFRYEFIQKFAKESKQFGAQRRESESKACTIALEN
LARSAGFGDVNRMMWALETEKLNEVAHLFKPKDIDGTSIWIDVDESGKASTKVQKGNKSLKSIPKAIAKH
PYVLELKSVQKDLKSQYSRAKQSLEQAMKNEIVFTVKEIANIYKNPVICPLIKNLVWVCDDNIGYVYNDK
SKFFICNIEGETYKLTAKNKLKLAHPVHLFESGKWSEFQHDLFSKQLVQPFKQVFREYYRINSDEISEKT
ISRRYAGHQIQPKKTVALLRNQLWTVDYEEGLQKVFYKENIVAKMFALADWFSPADIEPPTIETVEFFDR
KTYKSLELASIPPILFSEVMRDIDLVVSVAHAGGVDPETSHSTVEMRIAIAKELLLLLKINNINFEGSHV
LITGNLGEYSVHMGSGIVHKKGMGALNILPVHSQSRGKIFLPFADEDPKTAEIMSKILLLAEDNKIKDPS
ILSNL
>gi|260685720|ref|YP_003216853.1| hypothetical protein CDR20291_0346 [Clostridium difficile R20291]
MQIYFRVKAVGKRKPMLELTPFDVSDNINCLKEAISEIVSKNVLEYNEKIPEKSIINFLTNEEIESQADI
GKVGFGSIYNENKQSVEKAIEVALQAFEDGIYKVLINEDVIEKLDSPINLKSGDIFTFIRLTLLAGRMF
>gi|260685721|ref|YP_003216854.1| hypothetical protein CDR20291_0347 [Clostridium difficile R20291]
MNRYTKIINMMGSYYTKDFEKEKKNVIKVREVKEDTVRKFFLQGDCEVLVVFEDTGKEILIDDFSPEEDI
KKYLGTKFINKKR
>gi|260685722|ref|YP_003216855.1| hypothetical protein CDR20291_0348 [Clostridium difficile R20291]
MTSIKNKDILNCIDYSIKNKLFDKLNDVYKSLPVGNCSGCGNCCMESVGINLIEFLNIFCYLEDRVDLKK
SCISKILDYYFEEYTRKNPCPFKDTNNRCLIYEVRPLNCRMFGHWKKEDYNKNLDNVIEKNNNYRELMKK
QYGFEINDEVVNYRIDYCDRFIPNKDYLSKSKRLSFFDELMILDSNIYSSGNIDIDFRDRGIVEYFIESL
LYRNLAYNVKIRISKEYKIRKRTIDRIKRIVLV
>gi|260685723|ref|YP_003216856.1| metallo-beta-lactamase superfamily protein [Clostridium difficile R20291]
MFLYSFILVSNKLYHKYCQNEVRKVNLTKVKGNTFFIKGGTNTGIYVFEDNTALMIDPGLCGSRPRRVNK
VLDENNIQVRYIINTHGHDDHYGACNQFKEYYKDVCIMSSEYDKLYIENPELFSKYIVGGKSNVFMDNIL
KNKMLDDIKIDKSIEVGKIELNNEMFDIIEFQGHTPGSIAVLTKDNVIFVGDLLIGDEILSKYDFLFLYD
IQEQINSLEKLKNIDFEYLVLGHGKQVISKEDSYKLIEKHLNALKKYLYQIRELLVEPKSLEILLKNIIN
NNNLSNNYKEYHFFKSSLVSVISYLVDLEEIGYILENGELLYYTKTK
>gi|260685724|ref|YP_003216857.1| putative guanosine 3',5'-bis-pyrophosphate (ppGpp) synthesis/degradation protein [Clostridium difficile R20291]
MEYEKWNEILAPYEHAVEELKIKFKNIRKEYLAKGEYSPIEFVTGRTKKISSIISKLKRINAKDIETEID
DIAGIRIMCQFVEDIYAIVDLIKVRNDMTIIGEKDYITNYKDSGYRSYHVIIKYPINSIAGSKEIICEIQ
IRTLAMNFWATIEHSLKYKYDHYIPETLAERLRRASDAAFLLDQEMSEIREDIMKAQAMYQMKSIAIRDT
LNRIQELYDLGDTHKAMQYQRKLDRTETDKNITEILELKQEIDILLEQYKDTKVDDKVVQ
>gi|260685725|ref|YP_003216858.1| putative phosphoesterase [Clostridium difficile R20291]
MSLYAIGDLHFSTSVNKPMNIFGSNWDGHEKKIIDNWKEVVKEEDMVLVLGDTSWGINLSEAKKDLDIIS
KLPGQKILIKGNHDYWWTTVTSLNKLYEDMRFIQTNFYEYKDYAICGGRGWICPNDVKFDETDEKVYKRE
EHRLRLSLESARKSGHSKIIVITHYPPTNDKLEESLFTKLFEEYNVEKVIYGHLHGKESFKMGLKGIRNG
VEYTLASCDYTEFNLIKVHD
>gi|260685726|ref|YP_003216859.1| hypothetical protein CDR20291_0352 [Clostridium difficile R20291]
MRWILVFIFLYLIPLVVIFRNYKNFKRSCIYSSIYVVLATTIMISNIYMSGLNKIKESMYYHNYISDETY
DEKYVSNFKEKESTDLKQDNKKNEEISNNKNLNNKQDRNIQNKESNEEGSNDIKEKNNSDSNVSVNNKSE
KQEDNTKENNKYTSKEKNSEDIKKIDMESIGIFKKEIYNIERAALVPMRECIPYTKDIAKNITKLSSIKK
DVTNARNKCKEVVKEYENMQIPELSKEKYTETLSNARDDVKKAYELREKSMESALKLINTKSPKYIGKIT
EYLDLSDKQIESFKNRLNDLKEEINNSETNNIN
>gi|260685727|ref|YP_003216860.1| hypothetical protein CDR20291_0353 [Clostridium difficile R20291]
MMNKQSIGKLNMFFMGITQRNLDNRHFFIELEVIFKSGRKEFKGIAIEEDNKYKFNFKGKSDLYTFNELL
KNISKEAENYDGLVFKYVERGTIVVIEGDNKKVNVKYLDNKEEVPKIDEFTASQIKNRDYYVKVGQANAL
LKEIGVLTKDGKIKNDKIRKYNQIDHFVELIDSILKEIKDKDCITILDCACGKSYLSFVLNFYIKEVLKK
NCYFIGIDYSDVVIEASKNMAKNLGYKNMSFIKEDLTNYTPNRDVDLVISLHACDTATDMAIGLGIRAKS
EAIVVVPCCHKELLGQYRYEAMEPILKHGVFKARFADLITDGLRTLLLEGNGYDTSVVEYISPLDTPKNL
MIRAIKTKTNNDKALKEYKELKSQFGVEPTLEKLIY
>gi|260685728|ref|YP_003216861.1| hypothetical protein CDR20291_0354 [Clostridium difficile R20291]
MEVKMNKLNICIDIDGTITSPYHFLPYLNDIFNKNITEAECITHNWEELYGSGIRDVYAEFNNKYIHSYD
EAKIVEGATEVISTLSKGHNLSFVTARHECLTDVTKNWLSRQGFSDIDVYLLGSDYKVEKARELSCDIFI
EDNPLNSVQLADDGVKVILLDTNYNKDVKHQNIVRVSNWIDIEKIIKQGI
>gi|260685729|ref|YP_003216862.1| hypothetical protein CDR20291_0355 [Clostridium difficile R20291]
MIDLKIENRKGKIHVKSSEIKDILELRPDFEYVQDISNTINQENILVFDCQLTGNSFDMDDLDIEEILEE
LGEEIDESYFSVLFEDVRAYLKDATDEIEADLQDNYLFDNLRCYFDIYNINQEFTDFKFVFLVSFKDIKI
SSLANLAKIVSKRQLIGASKFYS
>gi|260685730|ref|YP_003216863.1| putative transcriptional regulator [Clostridium difficile R20291]
MQSLNEIIAENLKKIRKEKHLSLDKIAQLSGVSKSMLSQIEKCEVNPTISTLKKITNGLKISFTSLMERQ
ESDIELIQKSDIDHFIEDNGKYISYPIFPFDSKRRFEIFMIEIEEGGNLDSNAELPGTQEFITVFSGEVT
IKINGEDYIVSSGNSIRFKADVSHIYRNSGKGIAKMSMVVYYI
>gi|260685731|ref|YP_003216864.1| hypothetical protein CDR20291_0357 [Clostridium difficile R20291]
MNNKKAVFFFCSDLKKDPVASNVIKCCEEIMDLNQTDIVIDDNFVLEFKDKNNNLFHFVKTKDVISHNYK
YYLPILNRHFRDYDFAGVVNWHEGENAPEHILTAHTIGDVPTGEFGNSNPRYFKNLINAIEDIKNENLLD
EFTTLTEATHWSGTTYGEESKLITEYSVPMLDIEIGSSSDSFNNSIAIQVLAKSLIRVFDCDEPLKTLLC
VGGVHFEKSFSDIIKNKEYNISIGHVLPNQWIVSGMYDDESGFEKLEKCINSIEGGIDCIVFHDKLKGTY
KEQCRKLGEKLNVPVFKHKILKNPKDLPIW
>gi|260685732|ref|YP_003216865.1| hypothetical protein CDR20291_0358 [Clostridium difficile R20291]
MILSYFALLIRVVLLAFERVVVRLLGDEEGDIYKNIASSFLFFFIGGVCLLPFSIMDRVSDWSFLIPCYI
SSLVYSIGSVAYVTSLATGEVSLVTPINSLNSLFLLLLSVIFLGEGLSLAKVAGIIIMIGGVFILKKVSS
FLKNVSVIFNNLPCRLMFLYIFLQSVGRVLDKAFFVQVSPILYSTILYFFVGLNLFIFLAFKKKQKIICE
IFSNKKGLSILSGAINGYSYLALLIALNNLELSIAEPFSQVSMIITLILAHFIFKENIKEKIPGSILILI
GGWLLLL
>gi|260685733|ref|YP_003216866.1| PTS system, beta-glucoside-specific IIabc component [Clostridium difficile R20291]
MNYKKTAIDIIEQVGGSKNILALEHCSTRLRFKLIDRSKVNQDALKKVQGVMSIVNGAQFQVVIGNSVVD
VYDEILKVCPLDTNDSTVKTEEKINLGTRFIEFIINIFQPLIFAIAGAGILKSLLMLLAMFNILKSDSTI
YTLLVAISDATFYFLPLMVAVTTANVLKCNRLVAIAAVGYLLLPATTTALSEGVELFGFTIPNIAYNAQV
FPAILCVSFLATMEKIFNKYSPKPIRTFFVPMMSLAITVPITLTILGPLGYNVGTIFTTIILFLYNKMGF
LVVGLLAAFLPFMVATGMHKALIPYSINTIGKLGYEALYMTSSLAHNISESGACFAVALRTKDETLKQTA
LSAGISALMGITEPALYGITLQHKRAMLGVVFSSAISGTFLGLFAVKGFVIVGPGLASMSMFIDPNNGNN
LIFASIGFVIAILGSFIITLIIWKEDTNTVESSIGDVVEEELEEEKEVNILVTPVEGKVIDLSKVNDELF
ASKTLGDGVAIIPTNGNLYAPCDSEVVMLFETKHAIGLRTKNGAEILIHIGINTVSMNGDGFKTFVKTGD
NVKEGDLLIQFDLDKISHANLDSTVMIVNNNGADYAYKVLNQSYGNVKKGSILFDVKGGI
>gi|260685734|ref|YP_003216867.1| 6-phospho-beta-glucosidase [Clostridium difficile R20291]
MRKFPEGFLWGGATAANQFEGGWNLGGKGWSVSDVAKAHFDADVKDYKSNNEITTKDIEEGLAHPEDEVN
YPKRHGSDFYHHYKEDIALMAEMGFKTYRMSIAWSRIFPNGDDKEPNEEGLQFYDDVFDELISYGIEPLV
TMSHYEPPLNIVLNYDGWYSRQVINMFVRYVETICERYKNKVKYWLTFNEVDSMIRHPYTTGGLVRDRFK
DKNFEEVIFQAMHHQFVASALATKICHEIIPNSKVGCMLTKLTYYPYTCRPEDVLATQQKMRSIYAYSDT
QVFGEYPVYLLSYFKNNNIQIAKEEHDDEIMKKYPVDFISFSYYMSSCEAADTTGLDITPGNTLLAVKNP
YLEMSEWGWQIDSIGLRISLIELYDRYRKPLFIVENGLGAKDILTEDKKVHDQYRINYLKEHFKCMLDAI
IEDGVELWGYTSWGCIDLVSESTKQMSKRYGYIYVDADDYGKGTYNRYKKDSFYWYKKVIENNSIDFK
>gi|260685735|ref|YP_003216868.1| beta-glucoside bgl operon transcription antiterminator [Clostridium difficile R20291]
MNYIIKKVLNSSVVLVHDAKYNEFILLGKGIGYGKKTGEYICGSNDNQMFVPVENTKSKKFLELMDDIPV
DILKITQEIIVEAEKLLNSSFNKNLYLILADHFNFAIERMRKGIKITNRVFWEIKNYYPNEFKVGMVAIY
MVEERLGIQLPEEEAANIAFHFANAMASDGNSYDTIKYAKVIGEIINIFVFSLNRTLDKKSMHYMRFITH
IKFFVERFFSDSMLSSGDDLLFNQMKRSNPKEMLIALKVRDFLEKKYGKKLTNEEIAFLVVHIARVKQ
>gi|260685736|ref|YP_003216869.1| asparagine synthetase [glutamine-hydrolyzing] [Clostridium difficile R20291]
MINLEEKYLTRKDTYMIKILEYNGHIRNWKVLCEELGIDSSLCRDERERAILVEAYKTWGYDMANHMHGM
FAFALWDTVEKKLFCLRDQFGVKPFYYYETENGKLLYGSSIRKIMEQPGFVKELNEDMLQIYMSFTYVAG
ENTFFRGVKKLMPGHYLVYQNKTVCIGRYWKPEFHPDHSKSIEEWTDEIHTTLQKIMPEVKSENETAELF
LSGGVDSSYILAMSDIEKTGSCGYEEERFDESKLAQQTANILGCKNSRYIITPEEYFASVPYVMYHMEQP
TGDASAIVFAIGCKAAAENTNICYSGEGADEFFGGYNIYHKAECYGENLKTFYIGNTNIMNEGEKRKILK
KYNPDVLPIEVVKGIYEETEELDTLTNMSNVDIQIWLEGDIYFNIDKMSTAVGLEVRMPLTDTRIFDIAS
RIPSEYKVKGKENKIAFRTAASKTLPEEIAFRNKLGFIVPIRIWMADDQYNKDIRDKFNSEIADKFFNID
EINEIFNDYISGNSDNWRKIWMIYTFLVWYEIYFVKC
>gi|260685737|ref|YP_003216870.1| Radical SAM-superfamily protein [Clostridium difficile R20291]
MNILYTIENSIYVNITNTCPCSCVFCIRNEKDEVANSGSLWLEHEPSVDEVKEAFNKYNLDDYDEIVFCG
YGEPLMRINELIEVAKFIKEKSSIKIRINTNGLSDLIHNKKTAILLKDVIDTVSISLNAPNKEAYNRVTQ
PKFGEKSFDYMLGFARDCKKYIKEVAFSVVDEISPEEIEESKQLAKKLDIPLRVRHKN
>gi|260685738|ref|YP_003216871.1| hypothetical protein CDR20291_0364 [Clostridium difficile R20291]
MNKVTSKKTTYIVTSALFASIICLTIAYILHIPVGGNNGYVHIGDAFIYLAATILPTNYAIAASAIGAGL
ADLSTGAAIWVIPTIIIKPILVLFFTSKSDKIINKRNIVASVVAGIVGLVLYMFAEGIIIGSFTSAFVMS
LLGLLQPIGSFIVFIILGMALDKLDFKKRYFN
>gi|260685739|ref|YP_003216872.1| (R)-2-hydroxyisocaproate dehydrogenase [Clostridium difficile R20291]
MKILVFGARDYEEPVIKKWSEEHKDVQVDIYPENMTEENVVKAKGYDGISIQQTNYIDNPYIYETLKDAG
VKVIASRTAGVDMIHFDLVNENGLIVTNVPSYSPNAIAELAVTQAMNLLRKTPLVKKKVCEGDYRWIAEL
LGTEVRSITVGVIGTGKIGATSAKLFKGLGANVIAFDQYPNSDLNDILTYKDSLEDLLKEADLITLHTPL
LEGTKHMINKDTLAIMKDGAYIVNTGRGGLINTGDLIEALESGKIRAAALDTFETEGLFLNKKMNPGELT
DPEINKLLSMEQVIFTHHLGFFTSTAIENIVYSSLSSAVEVIKTGTATNRVN
>gi|260685740|ref|YP_003216873.1| isocaprenoyl-CoA:2-hydroxyisocaproate CoA-transferase [Clostridium difficile R20291]
MLLEGVKVVELSSFIAAPCCAKMLGDWGAEVIKIEPIEGDGIRVMGGTFKSPASDDENPMFELENGNKKG
VSINVKSKEGVEILHKLLSEADIFVTNVRVQALEKMGIAYDQIKDKYPGLIFSQILGYGEKGPLKDKPGF
DYTAYFARGGVSQSVMEKGTSPANTAAGFGDHYAGLALAAGSLAALHKKAQTGKGERVTVSLFHTAIYGM
GTMITTAQYGNEMPLSRENPNSPLMTTYKCKDGRWIQLALIQYNKWLGKFCKVINREYILEDDRYNNIDS
MVNHVEDLVKIVGEAMLEKTLDEWSALLEEADLPFEKIQSCEDLLDDEQAWANDFLFKKTYDSGNTGVLV
NTPVMFRNEGIKEYTPAPKVGQHTVEVLKSLGYDEEKINNFKDSKVVRY
>gi|260685741|ref|YP_003216874.1| activator of 2-hydroxyisocaproyl-CoA dehydratase [Clostridium difficile R20291]
MLKMYTMGLDIGSTASKGVILKNGEDIVASETISSGTGTTGPSRVLEKLYGKTGLAREDIKKVVVTGYGR
MNYSDADKQISELSCHARGVNFIIPETRTIIDIGGQDAKVLKLDNNGRLLNFLMNDKCAAGTGRFLDVMA
KIIEVDVSELGSISMNSQNEVSISSTCTVFAESEVISHLSENAKIEDIVAGIHTSVAKRVSSLVKRIGVQ
RNVVMVGGVARNSGIVRAMAREINTEIIVPDIPQLTGALGAALYAFDEAKESQKEVKNI
>gi|260685742|ref|YP_003216875.1| subunit of oxygen-sensitive 2-hydroxyisocaproyl-CoA dehydratase [Clostridium difficile R20291]
MKMSEKKEARVVINDLLAEQYANAFKAKEEGRPVGWSTSVFPQELAEVFDLNVLYPENQAAGVAAKKGSL
ELCEIAESKGYSIDLCAYARTNFGLLENGGCEALDMPAPDFLLCCNNICNQVIKWYENISRELDIPLIMI
DTTFNNEDEVTQSRIDYIKAQFEEAIKQLEIISGKKFDPKKFEEVMKISAENGRLWKYSMSLPADSSPSP
MNGFDLFTYMAVIVCARGKKETTEAFKLLIEELEDNMKTGKSSFRGEEKYRIMMEGIPCWPYIGYKMKTL
AKFGVNMTGSVYPHAWALQYEVNDLDGMAVAYSTMFNNVNLDRMTKYRVDSLVEGKCDGAFYHMNRSCKL
MSLIQYEMQRRAAEETGLPYAGFDGDQADPRAFTNAQFETRIQGLVEVMEERKKLNRGEI
>gi|260685743|ref|YP_003216876.1| subunit of oxygen-sensitive 2-hydroxyisocaproyl-CoA dehydratase [Clostridium difficile R20291]
MEAILSKMKEVVENPNAAVKKYKNETGKKAIGCFPVYCPEEIIHAAGMLPVGIWGGQTELDLAKQYFPAF
ACSIMQSCLEYGLKGAYDELSGVIIPGMCDTLICLGQNWKSAVPHIKYISLVHPQNRKLEAGVKYLISEY
KGVKRELEEICGYEIEEAKIHESIEVYNEHRKTMRDFVEVAYKHSNTIKPSIRSLVIKSGFFMRKEEHTE
LVKDLIAKLNAMPEEVCSGKKVLLTGILADSKDILDILEDNNISVVADDLAQETRQFRTDVPAGDDALER
LARQWSNIEGCSLAYDPKKKRGSLIVDEVKKKDIDGVIFCMMKFCDPEEYDYPLVRKDIEDSGIPTLYVE
IDQQTQNNEQARTRIQTFAEMMSLA
>gi|260685744|ref|YP_003216877.1| acyl-CoA dehydrogenase, short-chain specific [Clostridium difficile R20291]
MLYNKEQELLRKAVRDFVSKELDTLPAEMDKTGVMPKELIKKLADAKFISSNIPEEYGGGGAGYVSYAIV
MEEIARRCASTATFVTAGSSLASLPILYNGTEEQKQKYLKGIATGELIGAFGLTEPGAGSDAGGQQTTAE
LVGDHYILNGRKTFITNGPFCDVAIVIAVTDRSKGLRGTSAFIVESKWDGFSTGAHEDKMGIRGTETSDL
IFENVKVPKENLLGKEGQGFKIAMGTLEVGRIGVAALALGIAQGALDEAVKYTKQRVQFGKPIAKFQNTQ
FTIADMETKVCAARGLVYDAAQKRDAGMRVAQESAMAKYYASEIANEVAYKALQLHGGYGFIKDYEIERM
YRDARIVSIYEGTSEVQKMVISSNVLK
>gi|260685745|ref|YP_003216878.1| electron transfer flavoprotein beta-subunit [Clostridium difficile R20291]
MKILVCVKQVPDTNEVRINKETGTLIRDGVPSILNPDDANALEEALKIKDEHDDVTITVITMGPPQADFM
LRECLAMGADDAILLSDRAFGGADTWATSNTIAAGISKVGDYDIIFAGRQAIDGDTAQVGPQIAEKLDIP
QVTYVQDFKIEGKDIIVQRQLEDGYELIKVSTPVLLTAVKELNTPRYMSVDKIVKAYKHDVKVWTIDDLD
VNKEEVGLKASPTKVFRSFTPEPRGKGEILEGKADEIASKIIIGLKQKHII
>gi|260685746|ref|YP_003216879.1| electron transfer flavoprotein alpha-subunit [Clostridium difficile R20291]
MNDIKDLSSYKNVWIFAEQREGKIAPVVIELLGEGRKLAKEVDAELCAILLGKDVDGLAKELITFGADKV
YVADDALLEKYTTDAYTKVIKDAIDEIKPEIMLFGATHIGRDLAPRIASRVGTGLTADCTKLEIDPEDKK
IKQTRPAFGGNIMATIICPNHRPQMSTVRPGVMDKAEKDETRTGEVIALDYKITQDDIRTTVLETVKTKK
DLVSLTDANVIVSGGLGLGGPEGFEMLKKLADKLGGVVGSSRAAVDAGWIDHSHQVGQTGTTVKPNLYIA
CGISGAIQHLAGMQSSDFIIAINKNPAAPILEIADYGVVGDLHEIVPMLIEKLDSVDDLLEAIKA
>gi|260685747|ref|YP_003216880.1| sigma-54-dependent transcriptional regulator [Clostridium difficile R20291]
MDNNLIGLIEHVENPAILCKESGEIIYCNHLIDSIFSFLDIKKPRNINELDSNFDKTEILTDSKKKIAFR
ELRMTAHIYNMKDNNNENNIVYLFEKSLISDKVIEDIIEHIDEVVVVFNKDGVIEKMNTVSDEILPFKRT
EVLGRNITDLVRQGLVEEPIILNMLKVKKKIYRNIVYPDGKLIAYTAVPRWDSKGKLTGGVLTGRDISRV
IKLESQIKYSDISEDTEYISQSKIMDNIKKVVKRAAASDSSIFINGESGVGKEIIARTIYKYSSRRDKPF
IAINCGAIPNELLESEFFGYEEGSFTGAKKKGKKGLFEEANGGTIFLDEIGELPMQMQKKLLRVIQENTI
TRIGGSKPIKIDVRYISATNISHEDLRNNLKFRQDLYYRLSVIPVKIPPLRERKEDIVPLVNYFLKLYNE
KYNREVEVSPKVIELLEEYSWPGNIRELKNIIERFVVLSAKNVIGEDEFNMLINLDMIDNETDDLSPIVV
NGIMNLNDAYKIVDQIMISKAINKYGSITKAAEVIGIYPSTIHRKIKSGHIHV
>gi|260685748|ref|YP_003216881.1| putative fructose-bisphosphate aldolase [Clostridium difficile R20291]
MALITTKEMFKKAYEGGFAIGAFNISDLEQLQGVLKAAKAKNSYVMIQASMSAVKYAGPHTLVEMVKAAS
DEIGVDVALHLDHGPNMDAIKTCIDAGFSSVMIDGSHFDFEENVRITKEAVEYAHSKGVVVEAELGVLAG
TEDDVTSDVHKYTQPAEAVEFVERTGVDSLAIAIGTSHGAFKFKGEAKLRFDILEEIQSKLPGFPIVLHG
ASAVDQNAVATCNEFGGNIAGAKGVPVDMLRKASSMAVCKINMDTDLRLAMTAAIRKFLAENPKEFDPRK
YIGAGRDAIQAVVESKIDDVLGSANSIN
>gi|260685749|ref|YP_003216882.1| hypothetical protein CDR20291_0375 [Clostridium difficile R20291]
MPQIKIRGINENDICKISKKMINDLVEAVKCPRDYFEIECIKSVAIRDGKIADVYPFVEVAWFDRGQEVQ
DIVARIITDSIRNNLDVESMDLAFTVFEKEKYYENGEHF
>gi|260685750|ref|YP_003216883.1| pseudouridine synthase [Clostridium difficile R20291]
MAKKQRIDKILSNLGYGSRSEIKKYCKQGSVVVNGSEVSNPGTQVDTENDEILFNGEEVIYREYIYLIMQ
NSVKQEPCDFSHGRFRMNKPDGYISATTDKYDPTVLDLIDLSYLAFEPFPVGRLDKDTEGLLVLTNDGKL
SHRVLSPKKHVPKTYYAKIDGVVTEEDVEAFLEGVVLDDGYKTMPSQLNILKSDDESEIELTIHEGKFHQ
VKRMFESVGKKVVYLKRLSMGNLKLDESLELGEYRELTDEEVKLIEER
>gi|260685751|ref|YP_003216884.1| transposase-like protein b [Clostridium difficile R20291]
MIAVEKAYKFRMYPNKKQQELINKTFGCCRFVYNKYLAKRIEVYKNDKETFTYKQCSSDLTNLKKELKWL
KEPDKFSLQNALKDLDNAYKKFFKEKAGFPKFKSKKINRFSYKTNFTNGNIMYCGQHIKLPKLGMVKIRD
KQVPKGRILNATISKEPSGRYYVSLCCTDVDIEVFENTNNQIGLDLGIKEFCISSCGEFIENPKYLKKSL
NKLAKLQRELSRKTIGSLNRNKARLKVARLQEHIANQRNDFLQKLSTKLIKENDIICIEDLQVKNMIRNC
KLSRLISDVSWSEFIRQLEYKANWHGRQIVKVGKFFASSQICNKCGYKNEEVKDLSIREWICPSCNETHD
RDINASINILKEGLRLITTQNK
>gi|260685752|ref|YP_003216885.1| putative tRNA (Uracil-5-)-methyltransferase [Clostridium difficile R20291]
MSVKKKDVIEFEVDKMEFGGTSLSQVGDRVIHMKGGISGQKVRAGVKKVRSKKAEVKMIELLENSPLETE
ETCKHFRECGGCTLLSVPYEKQLEIKEKQVMDLFLKQDLFGFQFLGIEGSPENKYYRNKMEYTFGDEVKN
GPLTLGLHKKGKHIDIQTVEECMLVDEDFSKILVSSVEFFNEKKLPYYRTMNHKGYLRHLVVRKGIHTNE
IMVNIVTSSQEDFDMNEFKDMLLGIDLKAELVGVLHTINDGLADAVQCDELRVLYGRDYIQEEILGLKFK
ISPFSFFQTNTKGAEVLYSIARDFIGDYNDKVVFDLYSGTGSIGQVMAGAAKKVYGIEIVEEAVVAANEN
AKLNGLTNCEFIAGDVAKVVKDLKDKPDLIIVDPPRPGIHKDAIRDICGFGAKEIVYISCNPKSLVVDLV
DFKGYGYEIKMVKCMDMFPNTPHCETVVKLIRE
>gi|260685753|ref|YP_003216886.1| hypothetical protein CDR20291_0379 [Clostridium difficile R20291]
MFKKKLIAVAMSITMISVGSFSYAHSGRTDSSGGHRDNKNKSGLGSYHYHCGGYPAHLHNNGGCPYTGGG
SSSGTTTSVNNEEKQKRSVGEKGYNQGYEDGYKGNYSSSNYSGDYSDTYESKYSEGYEKGKAKLEEEEKV
AKETGYNLGLTGAKSNNTYEKEVLKNAYDTGYSTGYNEYKTKKIEEYKAKGIEDSNKDKEKMTFEENIDS
EFIDAYNNAYDEIQEQLKNDYTTQGFESAIKGERFDTSTIGNVKYANWFKEGYDNGKVKLPKAKESVYNQ
GYNEEDFSIPYEMKSIETKLKGVYDEGLEKREEEKSRNATYGVGAGTAAVVAGVVYKNKKRKKI
>gi|260685754|ref|YP_003216887.1| hypothetical protein CDR20291_0380 [Clostridium difficile R20291]
MGFNFRKSINLGGGLKLNLGKKSVGISAGVKGARVSVNSKGRKSATLSIPGTGISYTKTSTKKRKPK
>gi|260685755|ref|YP_003216888.1| cell surface protein [Clostridium difficile R20291]
MKLSKTLLAIGMSVSLLIASCPTSNALSSINSIKGTNKYETAGLIADKQNYDIAILINSENGLSDGLSAS
GLSGAKNAPILLTKKDTIPSETLKRLEKVKEVYLIGGKNSIGASVQKILSDKKISINRISGTDRIDTSHK
VAKEIGRVSTVKKVILTNAFKGEPDAMSVASIAVRDKSPIVLTDGNTTSFATDGLETYAIGGKVSMSDKL
INETKATRIGGVDRYDTNKQIINKFYNGSKEFYIASGTDLVYSLVGSTIAQKTPIVLVGNGSNKSILKNA
SKITAIGNIDDVIIKQCLNITNNVGDSNTGIVKDTNSNNTNKPSNEPSSNNPGLTDKSTVYVTPNGKSYH
LTKNCSTLKRSKTINKVTLKQAKSQGKIDPCNVCVK
>gi|260685756|ref|YP_003216889.1| integrase, catalytic region [Clostridium difficile R20291]
MVITLSKNEDKYKAIQSLFNEKKASLIQLCEIAKVNRSGYYKWLNRDKSNLELENIKLATLITKIYEEKK
GVFGSLRMTLQLNREYKLNVNHKRVYRLMRAVGLRSICRKKKFSYVKCTQEVIAENVLNRKFSADKTSQK
WLTDVTEFKLTDGTKAYLSAILDLGDRSIVSYVIGKSNNNNLVFETFNKAIEVYPNAKPIFHSDRGYQYT
SRVFKSKLLTQGMIQSMSRVGHCIDNAPMEGFWGILKVEMYYLRKFDTYEQLVKAIDDYIYYYNNFRYQK
RLNSMSPLEFRKYLSTEIA
>gi|260685757|ref|YP_003216890.1| hypothetical protein CDR20291_0383 [Clostridium difficile R20291]
MSKTKVSSEQKIEAIESYLKGENSVIKIMEELNIGKRTFREWMRNYETFGNDGLIKQSHKSCYSKEFKLN
AIESYLNGEGSYDTISKKYKMRSVHPLKAWVKEYNLHKVIKETPKGGLFMETRKTTLDERAEIVKDCIEH
GLNYNLIAKKYFVSYSQVRRWTLKYKENGIDALEDRRGKSKKEDELTQLDEIKLELKIVKAEKHKLQLEN
EFLKKLKIIERGW
>gi|260685758|ref|YP_003216891.1| putative arginine utilization sigma-54 dependent regulatory protein [Clostridium difficile R20291]
MNEILENIDEGVHFVNKDGKTIIYNNSVQKMEKMNRHDILANSFFDIVNKMKINRSTLLEVLEKREVIKD
NIQKYLDKNGKEITAINTTIPIDIKGEFVGALEISKNMTTIENLLNRNYKKNLVNKVSSRQKKGYEFDDI
LGESNLIKEAIEKSKKACKSDASVFIYGETGTGKELFSQSIHYGSNRRNYPFIAQNCAALPESLFEGILF
GTSKGGFTGAIDRPGLFEQANKGTLLLDEINSMPIMLQAKLLRVLQEGYVRRVGGTKDIPIDVRIIATTN
ESPKVILNEHKMRKDLYYRLNIIHIKIPPLRDRKEDILLLCKKFISKYNKKLNKKVVGISDEAIKILKNY
DWQGNIRELENIIYCTMSMMEDEVQIETSMINLNDYYNLKENKESNNYSLNDLEGKTLSKIISEIEEKYI
YESLEKASYNITKAASILGMNRQNLQYKIKKYNIKIL
>gi|260685759|ref|YP_003216892.1| putative oxidoreductase [Clostridium difficile R20291]
MRKVRVGIWGFGAMGIGMANMILKKEGIEIVSVCSRSTSGKSMYDVLGIERGERPEVIINKNYEEVFREK
SVDVVLLATDSFTKKAFDKIIFLLNRKINVISTAEQMAYPQADDADLAKKMDEVAKENGVSILGTGINPG
FVLDLLVLALSGTCEEVTSIKAKRVNDLSPFGKSVMEEQGVGVTREEFIKGVEDKTIAGHVGFVESINMI
ADGLGWKLDKIEQTKEPIMTTVDRKSKYGEALAGNVAGCRQCGYGYVNGDVLIEMEHPQQIIPEVEGIKT
GDYVSIKGIPNIDLQINPEIPGGVGTYAMIVNSIPLIINARPGLKTMLDIPVPRAIMGDIRNQIEVELEE
ESKAN
>gi|260685760|ref|YP_003216893.1| hypothetical protein CDR20291_0386 [Clostridium difficile R20291]
MDAKINDWVIIHNIVLTPEERAPQVPEDTKKVSLEMWVKGFIQSDASIGDLVEVKTITGRLVKGNLLKVN
PYYTHDYGKCIPELLQIGIQAKEILFGGVYNE
>gi|260685761|ref|YP_003216894.1| putative pyridoxal-phosphate dependent enzyme [Clostridium difficile R20291]
MNNSTSIKDMSYQAVMGRNNEIMKNAIGLDYSSFEQEGIGFDYEKMMSETGYTLQDIEAIQSQYAVGNTP
LIELKNLTKLARKCAKEGKGAKIFVKDEAMNASGSFKARRAATAVYHAKQMGYKGVIAATSGNYGAAVAS
QAAMQGLKCIIVQECYDSNGVGQPEIIEKARKCEAYGAEVVQLTVGPELFYTFLVLLEETGYFNASLYSP
FGIAGVETLGYELAIQFREKYKKDPDIVVCTNAGGGNLTGTARGLIKAGSINTKVVGASVDLKGLHMASD
NQFNKKSFTTGHTGFGIPYCTWPDRSDVPRSAARPLRYMDRYVLVKQGEVFYTTELLAQLEGIERGPAGN
TSLAAAFSLAQELDEDKVIVVQETEYTGAGKHICPQLTFARENGIDIKFGNPREEIAGVNLILPERPELL
KCVDIDMNKIRKSFIKNCISNNHIDNIDKLSNRDIEFLMEEVKSSRDFVVDVLNNL
>gi|260685762|ref|YP_003216895.1| D-ornithine aminomutase S component [Clostridium difficile R20291]
MKKREDDFEVRRKHLQELSDDELKERFWNLATQIVEPMIELGKKNTTPSIERSVLLRMGFSSLEVKPILE
GVMERGLIGKGAGHVVYKLAKSKNITVREAGLLLVKGEYWDEVTCLFREGVESC
>gi|260685763|ref|YP_003216896.1| D-ornithine aminomutase E component [Clostridium difficile R20291]
MLKENKKLDIDYILKDLDKYKPKRRGWVWREHLENLEMGPFKYKDCTKPLKKSVGLPSSKYFNNIDPQPS
PVITTEIASGRFEDDIRRMRMAAHHGADHLMVIRTAGQSHFDGLIEGTPQGIGGVPITRKQVRAQRKALD
FIEEEVGRPINYHSYVSGVAGPEVAVMFAEEGVNGAHQDPQYNVLYRNINMVRSFVDACEAKKIMAFANI
AQIDGAHNANATAREAWKVMPELMVQHALNSIFSEKIGIDKSNICLSTVPPTAPPAPCLRIDLPYAVALR
ELFSDYKMRAQMNTKYMESSTREATVTHVLNLLTSVLTRADIQSTITPDEGRNVPWHIYNIEACDTAKQA
LVGMDGLMDMIELKDVGELRDKARELKERAVLYMEEISEVGGYFESVEQGFFVDSGNYPERNGDGISRKI
KGGVGEGTVYEREEDYLAPVTAHFGYNNVAQYDENAIDNPSMLIDGCTFENPDKIIYIDELDDFDNVENR
LKESYEYRNGTKIKPEMEWCADGIVMITMMLPTDKRTAEFAALEFVKKMNLQEIEVISREVMHESEGTRI
EVKGRVPFDIDLNNLVIPEEPKVLTDEEIRADIEEKPMKIVSATVGEDEHSVGLREIIDIKHGGIEKYGI
ECHYLGTSVPVEKLVDAAIELNADAILASTIISHDDIHYKNMKKLHDYCVEKGIRDKVMIACGGTQVTPE
IAVEQGIDAGFGRNSKGIHVATFLVEKRREMSNK
>gi|260685764|ref|YP_003216897.1| putative component of D-ornithine aminomutase [Clostridium difficile R20291]
MENSKVSLKIDVLVAEIGSTTTVVNAFHDINTNNPIFLGQGQAPTTVFEGGDVRNGLSGAIKDLANKLSV
DDIEYNDMFATSSAAGGLKMTVHGLVYDMTVKAAKEAALGAGAVIRQITSGRIKRTDLNKIKEINPNIIL
IAGGVDYGERDTAIYNAEMIASMNLGIPVIYAGNVENQEEIRLIFEDTNYKLYITENVYPKIDLLNIEPT
RRIIQSVFEEHITTAPGMKYIKEMVNENITPTPGAVMEASKLLYKNIGDLLTLDVGGATTDVHSVTDGSD
YINKILVNPEPTAKRSVEGDLGVYVNMKNIVEVIGKENLQSELYIDIDAVIENYPPIPKSKEEILFVERL
TKEAVVKAMLRHSGKIRNIYGTTGKVKIAEGKDLTEVRYIVGTGGALTRLPSRIEILDNMLKYNKNNELL
FPKEKTKILIDNDYIMASMGVLSKKYEEASLKLLLKSLNFEEERLCILG
>gi|260685765|ref|YP_003216898.1| putative amino acid racemase [Clostridium difficile R20291]
MYPRLEIDIEKLKHNAKLISQMCHERSIKISFVTKSFCAQKEIVEEICSEGIDHIADSRIQNLKKLQDIN
LPKILIRIPMLSELEEVINYCDISFNSELETIKKLNELCESKNIIHKIVLMFDLGDLREGYFYEEDFFNN
VREIVRLKNIEIIGIATNLTCYGAIIPSRENIGRLVSIAKRMEEKFGINLEIVSGGNSSSIHLLINNNMP
EGITNLRIGESILLGRETAYGENINGTYQDAFKLICQVVECKEKPSVPIGEIGVDAFRNKPVYEDKGILK
RAIIAIGKQDINIDSLIPIDTDIKILGASSDHMILDVSNTKYDYKLGDNLEFLLTYGGIMSSSTSKYVSK
KIIV
>gi|260685766|ref|YP_003216899.1| Na+/H+ antiporter [Clostridium difficile R20291]
MKERECRKASLFDAMIPITCLILFLSLGVLVYGSSPHVPLIGAAAVAGLVAVYRLGFKWKELELSMFNSI
KMAMQAILIIIIIGVLIGTWIVSGVVPCMIYWGLKILSPNIFLVASTLVCAIVSLATGSSWSTMGTVGVA
LLGIGQSLGMPIGLIVGSIISGAYFGDKLSPLSETTNLAPAMAGTDLFTHIKYMLYSTIPSLLICLVIYG
VIGMKYSGQALDIKQIELIRSTLDSTFNTLSPVLLLAPAIVIGLVVFKVPAIPGLIVGAVLGVLFAVVFQ
GESMNTILDAAQNGYVSSTQIQEVDALLSKGGIMNMMSTVSLTICALSLGGILEKTGMLEVVASSLLRLA
KGVFGTVLCTMVTCTITNIIAGEQYLSIVIPGRMYNKEYKKRGIHPKMLSRALEDSGTLTSPLVPWNTCG
AYITATLGVSALTYGPYALLNIINPIVSLVLIACKFKIARIEDEPETCLNFDV
>gi|260685767|ref|YP_003216900.1| hypothetical protein CDR20291_0393 [Clostridium difficile R20291]
MTRISNITIAEQSEYCFLAIRKTIDFMVEFSEFSKQSFEKISKYLEERGILSSGAPIVCFHNMDLAKLDV
EVGFPVATYIDGKNEILQRIVPAQKIITAIDLGPYELQDPTLEDLFSWANSNGYKLHGDIYYQYLNDINR
PASEYLTKMMLPII
>gi|260685768|ref|YP_003216901.1| hypothetical protein CDR20291_0394 [Clostridium difficile R20291]
MKIYDILTRFYIQDIEKAIPFYENLLKEKCSLRFSYKEVGLELAQIGNVLLLSGSDDALKPFIETKSTFM
VDSVDEWRSYLLDNGAVVVRDKKKVPTGYNMTLRHPDGTIIEYVQHTKQD
>gi|260685769|ref|YP_003216902.1| AraC-family transcriptional regulator [Clostridium difficile R20291]
MDKRREAAMSYKVINVITAIDYIEEHLSEKLDLDIIANAVHYSKYHLHRTFTTSVGLTMHDYIKRRKLTE
AAKLLVFSKKPIIEIALIAGYESQQAFTSIFKAMYKKSPNKYRKEQEFYPLQLRFVLKKDNLFSKNVLEL
EKEIKLASMSDIPLWMNLVRLVIDGFPNLQEEEYIYQLEQYILEERALILKLNNVAIANMVFNRETRSID
FFGIHPQYRNSDIAQVFLKKVIEDFLIDTDISITTFREGDKADTGHRDMIKKLGFAEAELLVEFGYPTQK
FILPCVEERDNRQN
>gi|260685770|ref|YP_003216903.1| hypothetical protein CDR20291_0396 [Clostridium difficile R20291]
MSENKQVVNCDIIASNSKHNMCEHDVELLTFFPDEIAHLIEINNKLDNAFKKAENLVDKLDKDYMDAKMY
MVKNRGEIDPHEMFQNEQGLKQIDNYGAFMVKVRDKINKIKDSPYFARIDFRLKDMDDESKYYIGRFAFD
YEDELIILDWRSPIASMFYDYEIGKAGYDAPIGWVDGEITRKRQFKIKNGKLEYALESSINIQDDILQKE
LSHTSDEKMKSIISTIQKEQNQIIRNDKADTLIIQGVAGSGKTSIALHRIAFLLYRFKDKISANNVIILS
PNKVFGDYISNVLPELGEEPLCELSFENIAEVQLDRVINFESEKDPLEINDAKWSERVRFKSTLDFVKLI
DDYIKQMPNKIFIPKDYTFGSFTAKSDWIQSRFEAYNRYPVKKRLEKVAEDIHYKFESDNIMEEDLPKVK
SILKSLNGMLTIKNTLTLYKDFFKQMNISNMFVMAEKKTLEWSDVYPFIYIHAAYEGIQEDKIIRHIVID
EMQDYTPIQYAVINLLFKCKKTILGDFGQLVNPNHTHTLDDMKQLYNDGELVMLNKSYRSTFEIINFAKK
IQDISSLEPIERHGEEPALLKCNNEQDEINKIKIEIEEFKKSDNATLGIILKTDNDAKAVYDALREEYSV
HLISSESSSFTKGVSITSIKMSKGLEFDEVIVPSVNNKTYYSDYDRSLLYIACTRAMHKLKLTYVGTLTQ
LISM
>gi|260685771|ref|YP_003216904.1| putative antibiotic resistance ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MSNIIIKGLTQNNLKNISFKIPKNKIVVFTGVSGSGKSSIVFDTIAAESQRQMNETYSSFIRNRLPKYRK
PQVELIDNLTASVIVDQTPLGGNARSTVGTISDLYSSLRLLFSRIGEPYIGTTSYFSFNDPNGMCKNCSG
IGRVKVINIESIINPENSWNTGCINDSLFKPNSWYWKQYAESGLFDLDKPIKDYSFEEYNLLLYGSKNKD
GKQENPKIEGIFNKYNQTYLNRDISNMSKHTKEKSERLITDKECPVCHGKRLNKETLNCNILGYSIADMC
NMELTDLYDLLLQIKDKRTETVIKTLTDGLKRMIDIGLPYLHLNRESSSLSGGEAQRLKLVRYMGSSLTG
MTYIFDEPSAGMHPRDVHRMNQLLKKLRDRGNTVLVVEHDKDVISIADEVIDIGPSAGTQGGHVVFQGSY
DKLLLANTLTSNAMNLSLPIKTDSRHPKGTLPIRDACINNLKHIDVDLPVGIMTVVTGVAGSGKSTLISR
VFAQKYEKDVIKIDQSPVTATNRSMPATFLGFFDEIRKVFAKENNVEEGLFSFNSKGACPVCDGKGVLVT
ELVFMDPIINTCEACKGTRYSEEVLSKLYKGKCIVDVLSMTVDESLEFFTEKKLCKILQTMKDVGLPYMT
LGQPLSTLSGGERQRIKLAKNLNKKGTIYILDEPTTGLHGSDIEKLMLIFEHIVDKGNTVIIIEHNLDVL
KQADWVIDIGPDGGKNGGQVVFEGTPLEMFERGCTITSDFLRKSINI
>gi|260685772|ref|YP_003216905.1| hypothetical protein CDR20291_0398 [Clostridium difficile R20291]
MILIVILSIFIIASINIIILGKENIRDIVIPLTLFIVSDFLFLCGNIICRGGVMLLFIGLFAIPLMLIAF
IWICVHMIKLYYKKDLNKRKMIGCIFSIFISIGTIFIPSPSESFRFKLYEKDYSVVAKAILKVYDEKKLS
SESVFYIQSDKNELEKIFSKEVIKKMKKLNRNLDVVKISGNRNLVYFFFGAELQSIDGIVIFKDLKHVKP
KLDFINRSIQAPRLEYITNNVYYFKGEL
>gi|260685773|ref|YP_003216906.1| putative beta-lactamase [Clostridium difficile R20291]
MKRKNNFIWIVILLVVVAMGVYYVGRKHNNTKQKHDKNHINSELNKSKVENNDKNKKEKINMVDYSDCFE
GISGGAIFYNTKNKEYNIYNKELIETRRSPCSTFKIVSTLIGLEKGVINSKESVMGYDGTEYPNKNWNKN
LSLEEAFKESCVWYYKKLIDKVDAKSVQNILDDLKYGNCDISEWEGDLKNGKGHLNGFWLESSLQISPKE
QVQTMAKIFEGDTNFKKEHINILRDIMKIDVNDKNINVYGKTGTGFDEKNKRVDAWFVGMLEREGDTYYF
AIKSDDSNKEITGPKVKEIAINIIKKYYSVRE
>gi|260685774|ref|YP_003216907.1| ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MEILKCENLTKIYGSNQTRVTALNNVNLSVQKGDFVSIVGASGSGKSTLLHLLGGVDRPTSGKIYVEDTE
ISSLKEEALAVFRRRKVGLIYQFYNLIPTLDVRKNILLPMLLDKRKVDEDRFSEIVSILGLSDRLNHLPS
QLSGGQQQRVSIARSLIYRPAILLADEPTGNLDRKNSEEIVDLLNLSNKRFNQTILLITHDEKIALEANR
IVTMEDGVIVSEKVVKK
>gi|260685775|ref|YP_003216908.1| ABC transporter, permease protein [Clostridium difficile R20291]
MNILQEYTLDFVRRNKRSSIAIMLAILLTTTMMSSLCGLLYTMWTDFIRLSIEKEGNWHGELFDYTYGSD
LPLIENFSSVDDVMVKGQWYVGKINDEKRDYIIYRNATSEYWNSMPEKDTIIEGRRPNNANEIALSKQYF
ENNPSVKIGDKITLPIGDRILNGKPLEPIAQKSKGESFKKISETTLTIVGKVDVSTSSVIPAYTALGYLD
RTSIKPNDSITVYLRFKNIRDTYKELPKLAKSLGWKTNEYGKYNLKYNSNYLLKMLVFSPEQKASMSSIS
KFSTPIMYLTIAIFTVAVFVMVIYNAFSLSANARLTQLGILSSVGASPKQIKMSVVFEGFLLTIIPLPIG
LFLGWLLCNRLIVYINSVNYHTDVPEVVFTYGIPAFLPAVLLTIVTVWISALIPARKVSKISPIEAIRQG
DSVKIKKSHKYSLGKIFGIEGELASNALRARKKSYRTATISLTLSFLLLTCFLHIIANQEGAKAVYGSDN
YKDQRDIAVYLENSEPVESAFIEKLDNTEGVKSSLYYQKMSASTWLTEKDASKELAKNGGFKSIVSSKKY
SPIERDGKFRIISNIIGLDDKSFTEYCRQISVDPKLFYDTKNPTSIVYNKEEDINRSTRRNKVYIDYLNL
SIGDNIKLNEKVYDEDKGDYTYNMKVGAITSTLPKTVDTSSKYTLMQIVPMSMVQEISKNYDEVSRLRSN
RLIGVFKVNNREDIPRVREKLESIYNKDYGSGDYSIEDVLESEKQKASGIKTMNLIVGFITGLLAMIGLS
NVLATVSGNTRSRRQEFAMLRSVGLSPEGIKKMLVLEGLFLGITPLLLSIPVQIGIVYAFLRINEIYFIE
YLPFAPISTIIGFTILILFIVIASYMTGYKQLKNENIVESIKNETI
>gi|260685776|ref|YP_003216909.1| two-component sensor histidine kinase [Clostridium difficile R20291]
MKTPRNINSTVVFIIFCLIITFLLSVILTTITSFNEYNVLSKALGASYEYNPKSTESILKSLKNSSDKDF
KTGNEILSKHGYSKSTFWSKNFFYFLVISFGIISTMATVVYIIKHRTNKQKLSRINNLTQYLEEVNLGKE
SVLLRCEDEFSHLEDEIYKTVGELRCSKEFALKERQTLSDNLADIAHQLKTPITSMSLMAQLLSENCPDE
EIDYINRLTNQISRLERLVSSLLTLSKLDASTLIFESKLIDVHSLLTYAIEPIEGSLREKHQTFTIEASP
SVEFEIDINWTLEALLNILKNCSEHIEDGGYIVAYYSQNPLYVEIIIEDNGKGFAQEELPYIFNRFYRGK
NASKDSIGIGLALSKSIIERQNGTLHAENCHNGGARFIIKFYT
>gi|260685777|ref|YP_003216910.1| two-component response regulator [Clostridium difficile R20291]
MAKILLLEDDDTITFGIKTSLEKKNHTVCCYNTIAEAKKNFDKTIDLILLDLNLPDGIGYEFCQYVKSIE
DTPVIFLTVRDDEKDIIRGLDMGADDYVVKPFLLSVLQSRINAVLRRTHSNTNNTITCGNISLNKVEVKA
YLDNVEVLLTAGEYKLLLSLMENKNRAMTRTKLLEMLWDVDGNFVNDNTLTVTIKRLREKLKNPPCIKTL
RGIGYRMEDS
>gi|260685778|ref|YP_003216911.1| TetR-family transcriptional regulator [Clostridium difficile R20291]
MNELAKEVEYTKRTIYKYFSCKEDLFFAVVLRGYKRLWDNVKIESAKGKTGFEKIKLSYFAFHKFYSVEP
SLLCLMGMIGIVNSEKSDTDMLFKEKFFSFNKFMFDEIQGMFEIGKNDRSIRHDIEIPTLMYSSIFTLTG
FFNLLSVTGKSYLNNFNIDEEKFIETTLALLIDSIKA
>gi|260685779|ref|YP_003216912.1| transposase-like protein b [Clostridium difficile R20291]
MVVVEKAYKFRMYPNKKQQELINKTFGCCRFVYNKYLAKRIEVYKNDKETFTYKQCSSDLTNLKKELKWL
KEPDKFSLQNALKDLENAYEKFFKEKAGFPKFKSKKINRFSYKTNFTNGNIMYCGQHIKLPKLGMVKIRD
KQVPQGRILNATISKEPSGRYYVSLCCTDVDIEVFENTNNQTGLDLGIKEFCISSCGEFIENPKYLKKSL
NKLAKLQRELSRKTIGSLNRNKARLKVARLQEHIANQRNDFLQKLSTKLIKENDIICIEDLQVKNMIKNH
KLSRLISDVSWSEFIRQLEYKANWYGRQIV
>gi|260685780|ref|YP_003216913.1| putative hydrolase [Clostridium difficile R20291]
MKIKENVLMLDSTRGSNCFIVFDKEIILIDTGLPFMGKNIIKELKTLGIKLTDIKHILLTHHDVDHISNI
KLLKEKTGAKVWAHVEDIPFIIGEKDRPGFKKFIGKAISRRLIKDVEPYGENMKIGNIKIIHTPGHTPGH
VCMIFEDVLFAGDLVKNKNGNIVPYPNPWNWDYKKMMKSIRELDNLKYEWICMSHGTPCIK
>gi|260685781|ref|YP_003216914.1| RpiR-family transcriptional regulator [Clostridium difficile R20291]
MRLESLVNQSYNSLNENDKIIIKQILICQREYRNFSCEKIANECNVSRATLLRLCRKIGLDSFSDLKYLL
KNNQLEFVNNDNNFHDVCENYRLLMNELQKISFQDICKIIYDAETIYIYGTGNEQKSLAQEIKRIFLSVG
KCVIDLFDIGEIEFMRESFQKSDLFIIISLSGETKSGIEIAKFINNHIHTISLTRLDNNTIATLCEYNLY
VETQKLDTLQAISYEVVGAFYALLDLLHMNYIEYRRRKE
>gi|260685782|ref|YP_003216915.1| RpiR-family transcriptional regulator [Clostridium difficile R20291]
MKIEGLFNKYYNSFTANDKYICECILNHKEDCIKLSIDEFADKYHISTSALSRFAQKLQLPGYSELRVII
RLNETEVEYKNQSKHQLMDCYNKVIDDIEKKDCSIMFERMKKANRIIVFGEGYSQERVVKEMKRIFLPTG
KIIYDVYGYDMIQALNHFIKTDDMIFFISLNGDTSTIIDFAKEMRMKGTYMVSITKMISNPLARLCDENL
YIQSISISVDKQLDYDVTTPYFILIELLYIKYKMYLESEHIPRK
>gi|260685783|ref|YP_003216916.1| putative hydrolase [Clostridium difficile R20291]
MKLYKLLILDIDGTLRDEVYGIPESAKHAIRLCQKNHCSVVICTGRSIGTIQDDVLSLGVDGYIAGGGNY
IQYHGELLYNQSFNQRLIKEVVCLLKKREVAFSIESQEKVFMNQKAKEIFETMNQLKGTNSCINKQHIQE
KITYENNIEEYKSQDVHKICLWSNEKVFDEVKDILQDKMELAQRDISSQYYEIIQKDFHKGKAIKRLQER
LGVTQKETICFGDGQNDIVMFQASDVTIAMKNSHQQLKDIATSICEDIFDNGIYKELKRRNII
>gi|260685784|ref|YP_003216917.1| oligo-1,6-glucosidase [Clostridium difficile R20291]
MEKKWWQKEIVYQIYPRSFQDSNNDGIGDLQGIISRLDYLKDLGITSLWLCPIFKSPMDDNGYDISDYLD
IASEFGSMEDLKELIKESKDRGIKIILDLVLNHTSDEHPWFQEALKNPESPYHDYYIFKKGNDLPNNWRS
VFGGSVWEKVENRDEYYFHSFGKKQPDLNWENPILRSELYQMINTWSQMGVAGFRVDAITFIKKNLSFQS
LESDGVDGLVKCTKTVRNQPGIEKMLYELKENTFKKYDCMTVAEAAGISYDQLGDFIGEDGFFSMVFDFK
HADLDVASGSEWFKRISWTIPDLRKCILDSQMYVQEHGWAANFIENHDQPRATTKYLLQYERNDDAVKML
GAMYFFLRGTPFIYQGQELGMTNFKRDTINDFNDLSSIDQYYRSIDEGYSEEEALEFVNLRSRDNARTPF
PWADKENAGFSDATPWLKVIENYKDINAQSQINNSESILEFYKKMIKLRQDSKYSDCLIYGSIEPIDIES
DNVIAYRRQLDLVVIDCYYNFSDKLVEIKTEEKYDIVFQNLDDINLLNKTVSLKPFQAVLLKVR
>gi|260685785|ref|YP_003216918.1| PTS system, IIabc component [Clostridium difficile R20291]
MNKYNKIANELIEIIGENNIISITHCATRLRVMVKDREIINDKKVEKVNEVKGVFFTSGQYQIILGTGIV
NKVYAEVEKMGLKTLSKKEQDELVKNNETGFKKVMRTLADIFVPIIPVIAATGLFLGLKGCLFNDNVLGL
FGMSSANIPLYIQTLVSVLTETAFAFLPAIIVWSAFKVFGGTPVIGLVIGLMLVSPILPNAYSVADPSNE
VEAIMAFGFIPIVGCQGSVLTAIVTAFIGANLEKWFRKHMPNVLDLIFTPFFVMLITMLVILLGVGPIMH
TIELKMVDIISLLIGLPLGIGGFIIGFTYPLAVITGLHHTYVMIETSLLANTGFNALITLCAMYGFANIG
TCLAFMKKSKNNQVKQTAVGAMLSQLFGISEPVLFGIQLRYNLKPLIIMCASSGLGAAILSILHIQSNSY
GLAVLPSYLMYIYDGYNLITYLLVSIFVVAFCFIVTCLFGVPKEAINEDEDEELVFNENNENFVSPAKGK
IVALENVPDETFSKKMLGDGFAIDIIDGKIVSPISGKLETVFSSGHAFGIKGTNGEVLIHVGIDTVALNG
DGFDIAVKQGDMVKQGDVLVNVDLKRIHELGKSTLTMVLFPDGKKVNILDINKDVKIGQRICVE
>gi|260685786|ref|YP_003216919.1| putative beta-lactamase-inducing penicillin-binding protein [Clostridium difficile R20291]
MYAPFFIRFLLSTLTLSILIVIILLAKKVFKKHISAKYQYNIGFILLIMLIIPFVPLKYINLGNVFNYLY
TFNQLGSSTNRTSIIKNSPNSIINNSNALNDFSVSLNQVNFDSLNILLLISWIIGILIMIAITIHCNIKI
KNMKKSIQILRDEEIVFIFEKCKKDIGINKDFILCKSPIINTPITFGYFKPHIILPDKSISKLSLKDIKY
ILLHELQHFKNKDILINYIMCFLQILYWFNPLVWYAFKEMRIDREIACDISVLKKLDKDSHIEYGQTLIN
FVDNISRPSNLTLTSDIGGSKKQIKKRLLKIMDFHNESNTLKFKSILIFTLIALIVFGNIPKLSIMADIN
EKYRPTNEQTVYEDLSQYFKGFDGSFVMYDLKSKQYHIYNKEKSKTRISPNSTYKIYSALLGLENGIITR
NNSHIPWDGKHHSNSSWNEDQDLFSAMENSVNWYFQTLDKKTGLKNIQTYLKQIGYGNYDVSGGISNFWL
ESSLKISPIEQVELLESFYTNKFKFEDKNIETVKDSLLISKKDGVSLFGKTGTANINGKDVNGWFIGYVE
KNENTYFFATNIQSKDYSNGSSASKITLSILNDKKIYNP
>gi|260685787|ref|YP_003216920.1| penicillinase repressor [Clostridium difficile R20291]
MKKLPHISEAEYQVMKIIWKYAPISTTEVIEKLVETSTWSPKTIQTMLLRLVKKGALTYEKNSRVFVYTP
LVKEEEYVATESSSFLNRFYNGTLNSMVLNFLENDKLSEDDIEELREILNKRTTKGDK
>gi|260685788|ref|YP_003216921.1| putative iron-sulfur flavoprotein [Clostridium difficile R20291]
MIITVINGSPRKNGATSKVLTYLYKDIERLIPDVKINYFDLSEVNPSYCIGCLNCYKMGKCINQNDKVEY
IHDIITKSDGVIFGSPTYGSSVTGLFKVFTDRAHMMLERLLYRKPCIAVTTYENARGSKAISFIKSMVLD
SGGYVCGSLSIKTGFNQNPITEKVESKIQKVSKKFIYCIEEKKNPPVLSQIYNFIAINAVLKPMAFKDIE
QYKGIIDRWEEQGII
>gi|260685789|ref|YP_003216922.1| MarR-family transcriptional regulator [Clostridium difficile R20291]
MKDFEKLYEATTKLVSTSLKVKDDLKKMFKQNGYDITTDHYALLRFLWEQDGISQIDLCEKSCKDKSNTT
RILDVMKNKGLIVRKVDVKDRRKFQIFLTDLGRELEEPLNEIASIYATETFKSISDEELPLFTDILDRIG
K
>gi|260685790|ref|YP_003216923.1| putative iron-sulfur protein [Clostridium difficile R20291]
MNSKIYYFSGTGNSLVVSKILKETLNGSKEVIPLAIHRKENNIDINEDILVIVFPVYFADVPDIIKSFVE
KLNFNINTHIYAIATCNGVAGHSLFTIDKLLKKRGKKLSAGFLINMPGNALITPSDVEEERLKNQTNRVA
EIAKCINNLEIGNIEGKNNLKSHIDSVVLRLVGKNMQIATTKFFAENKCNGCGTCKRVCPVENISIVDKK
PKWGNECERCLACFHWCPKEAINVKKSFLTNRKKYHHPDITVKDIFLDK
>gi|260685791|ref|YP_003216924.1| hypothetical protein CDR20291_0417 [Clostridium difficile R20291]
MSCFICYYTFKYATIFSKLCALKLAFYSNLKLKTKETRYMKINIKSKLSEFIKQNNLFDDNRIISYLPNI
TIETDKIKTIMINEVVPTNTNDDFYSVDKDADYLKTTIPLFDSAGIEVSNINDILDMGIYITNAVKLPKS
EYTITRDTIKLHMPILEEEIKLFKNLEVVMLMGDVAKKSFNMITKKHIKKNVIPSISTYKLRNNELYYDN
LRVFPSYIMTGGNILIEKSKFEMASEDIKKMFEIING
>gi|260685792|ref|YP_003216925.1| hypothetical protein CDR20291_0418 [Clostridium difficile R20291]
MILNRTELFRGYSLNRFNEICNILSVNKIKYKYKVKNNAYSKKPFSNEITLGNLGQKEDFSYEYLIYVHK
DDYEQAESLINSKLR
>gi|260685793|ref|YP_003216926.1| hypothetical protein CDR20291_0419 [Clostridium difficile R20291]
MKKISQEKISTHIQEVPQEKIEQWKSLYEKYKSILKVNSKSVLEIIEFLKRKYVIVEETSEEFKHVVINN
IKLNKPFSQKISSDKELKPIVFTIPNEGNAKKLYDTQEETYSGCKIIVGMEFETGCVFVEGSDELNDEIT
SFKGLDKYDISNYYLVANYIRCLKKYKLID
>gi|260685794|ref|YP_003216927.1| putative lantibiotic ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MLFFHVSILLVIDLRYYKKGEINMKDLILETKNLSKRYGEQMAVNNVSLQIERNSIYGLLGPNGAGKSTT
LKMLVGLLRPTDGRIIFDRKPWKRESLAKIGSLIESPALYGNLTAEENLLVHTKILGIPKDKIYEVLEIV
NLKNTGKKRASQFSMGMKQRLGIAIALLSDPELLILDEPTNGLDPFGIQELRELIASFPKKGITVILSSH
ILSEVAQVVDNIGIINGGRLLFQGMPDPNENLEEFFTDVILKGGQNR
>gi|260685795|ref|YP_003216928.1| putative lantibiotic ABC transporter, permease protein [Clostridium difficile R20291]
MNALQSELLKYKRTFMGKLIVFFPVSFAAYAFIMQSTLMQNPLSQTTSWAWQSLLALIFNWWSFLFLPIG
FALFATLVAFQEKKAGNYRALRTHNVSPMTLWINKVIAMAVYSFISTLVLIVVTIITGLILKAGPVPFGQ
IIGASIVCWVVSLAILPLQLWLATWKGMFLSMGVGALGMIFGVLAATKPFWIAVPWSWAVRMVCPIINIH
PNGTILEAGDPLLNTSVIPIGIVVSLVVFIVLTALTAAWFNRRDDK
>gi|260685796|ref|YP_003216929.1| putative lantibiotic ABC transporter, permease protein [Clostridium difficile R20291]
MIKLLSSEWLRAKRTAVQWLTLCMPIIFSLCVVFYLTTKSGSTQEFAFEGFFTVWTVFIIPIGVGILAGF
IVQEEELAGNFNGFLCVGISRVRLYLGKFLFLLFCLTICTFIATLILCIGMSIAVPSGATIWLFLSAAGL
VVIGTLPLLAIHLWVSFAWGMGASIGISIGGILMAAILGLTSVGEKVWAFVPWTWPVKLGMLPGIYFIKE
AGTISTEAFYSKVMQTASIELIVVAIGLIIFLIGGVIWFKMWEGRKSY
>gi|260685797|ref|YP_003216930.1| putative lantibiotic resistance two-component response regulator [Clostridium difficile R20291]
MDLVMLLEDELKAKGHEVLIAYDGQAGIELSKQEPDLIILDIMMPKMNGFEVCQAIRDDVLCPIIFLSAK
QSETDKIKGLTFGGDDYVTKPFGLRELMARIEANLRREKRSQYINEENKRSTLYFGKLCLYMKERAIKID
GKNIDLTKIEYDIVELLALHAGQVFSREQIYEKVWGCDSEGDSSTVVERVKKIRAKFSAVTPEKEYISTV
WGIGYKWNKM
>gi|260685798|ref|YP_003216931.1| putative lantibiotic resistance two-component sensor kinase [Clostridium difficile R20291]
MKNQSLITQFRHTFIFIIIASIVATVITYVFALYLYIHSLNKDIYPPNYYERQVPRIEKYINEKNITLLS
QSNEEGLKRTIRGDDMPYQVVDNNGNILYGTNPKKLFKTKEELFNNFINKTVRKGGYIHTVPIKGDNGKI
EGAVILFYQVKITFANSRGRFVFAVIIMALFSPFIYIVGFTRWLSKRFVKNINQPLHLLIDASKKIKEKD
LDFEIDYYSDNELGKLCSAFSEMKDELKGSLSAQWKMEQERVEMVEALAHDLKSPLSIILGYTDALIGNN
TDDNEKLHRYLTVIRENTEKSAALVQKMQYTSDLEKSNIQLNLVPINLPEFLRQKVQDYELQAHQKEVEL
ILKMKGNIQSPIQIDVDRLTRIFDNIISNSLQYTPSGGNISITVKDEKNCISYEICDSGRGFSSKDLKKA
LDKFYRGDEARQTKGGHSGLGLYIVKQLVEQLGGSVKIENSKSGGACVKFWHSI
>gi|260685799|ref|YP_003216932.1| ABC transporter, permease protein [Clostridium difficile R20291]
MKNYLSLSIKELKSQKLMTTFIIIAIVLSTIMTTVVGQSIGILQNLRIEQARSFNGDRHVSFHQLTKNQV
DDIKKDDRVYQAGTSITIGSSKIKDSGISVLVKEYDKTGLSNYPKLMKLKSGHLPKDKNEIALDENTLKL
MGIKPRLGVTIPMNLDISLLNDTIPPYNYTANFKLSGILEDDYTGYVSGIVNGIVGKGTSENLLPKRYIL
SSLDFKIKQQEKFQEIVNQLAKKINLSHNSIQYNWIYLNALKIQFEKDENSSNSDGISMIILVSLFVALL
VLLASGLVIYNILKISVTKKIKEYGCLRAIGAEPNQIYKIVILQILILCTVAIPIGAVIGIISSKGITGM
VTNILNPDILLANDNKEITELIHKNTTAYMFPLVLSTNVSLIFSFISALPSAIYASRVSPKIAMAGSTTK
IKRKIKREKAIKNFERHLAWLNLKRNKGRTIITILSLFMSITVFVALSEFSNVLDVSRSVSNLKEGDFSL
TNEISGFDKSTLDKIDKMKNVNRTSFIKYSEYKQGEIDTDINFENSGEMLKIIGIDEQTLKDLMPSITDS
ILEDFKNGSICFIKNPIAISTPGVKTRHTNLKPKDSITINKKQLDIYSTVDKMFFLQGNGWINGVDVIVY
NSVYNTLTNKNKFNQINIYAKDKSKLEQIRLSIEQICENNPGSHWISYIESDKQLKESFKQIEFLAWAVI
LFVGLIGTLNIINTTHTNINTRTNEIGVKRAIGMSNISLYKMFLWEGVYYGIFAAIFGSIAGYASAIIIN
MATIEKLDFTNIPITSILQATIISVLACIIATLIPLRKVKKMNIIDCIDINL
>gi|260685800|ref|YP_003216933.1| ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MIIKAKQLSKIYGSNNNKVIALNNVNLKINSGEFVSVIGPSGSGKSTLLHILSGLDNPTSGQVLLDDKDI
YKHTEKELSALRRKSFGFVFQQFNLLPVLTASENISMPVLLDKKQPDKDYLNEISSLLGIADRLNHLPHE
LSGGQQQRVAIARALIAKPDIIFADEPTGNLDSKSGSEVMNLLIKTSKQFGKTLVVITHDDRIAKLADRK
ISIIDGVLMEVK
>gi|260685801|ref|YP_003216934.1| hypothetical protein CDR20291_0427 [Clostridium difficile R20291]
MLSSTFCSLPFWICYFWCGISDILDGLIARKLRQQSGIGAKLDSIADFIFAVTILVTVGKNIALPMYLWW
CIVAIALLRLISYSIGFFKYRTFSSLHTLMNKITGISIFAFPLLYICFGLDVAGIMICIVAFLSSFEEIA
IMIKSKELNRDIKSIFM
>gi|260685802|ref|YP_003216935.1| two-component sensor histidine kinase [Clostridium difficile R20291]
MSLKKAFFVLTLSSLIIASVLTTFAYILLNNLYNSIQDKYLKTPINTGIITIVQNNVNQFSDYDKTLLNI
INILQLVLPLIFFIGLLLLADIIFYKVKLKTPIEILNKGAMEISNNNLDFCLEYNNNDELGNLCNAFEKM
RSELNKNNINMWTMINDRKQLNAAFSHDLRNPLTVLKGYSNYLTKYIPTGKLSDEKILSTTQLMSEHINR
IEYYVENMSNAQRLEDLVVSKSMSNINKFIENLDENISIIAKQEGKSFTLKSQINNINLFFDENIILRVV
ENIISNAFRYARNNVSILIYLEQELLTFVIEDDGIGFSKESLKLALRPFYRDKTLNDSNPHFGMGLHISK
ILCEKHGGSISIENNSTNSAKITAKFSTRN
>gi|260685803|ref|YP_003216936.1| two-component response regulator [Clostridium difficile R20291]
MNNKILVVDDEEGIITLLKDYFEMNGYEVYTAQSGKDSLKKISKNPDIILLDINMPEIDGIEVCNRIRDY
VSCPILFLTARIENTDKINGFRAGADDYIVKPFDLDELGARVSAHLRREQRKSNQTKIKFYNDLTIDYEK
RLICIYNNQISLSKKEFDIVELLSMNPGQVFDKEKIYDRVWGYNSNGNSDVIMEHIRKIRIKLSKHTLEN
YIETVWGVGYKWIK
>gi|260685804|ref|YP_003216937.1| putative carbon-nitrogen hydrolase [Clostridium difficile R20291]
MNFYKIAVCQMMTTENKIENINHAVDMVTEAAINGAKIIVLPEMFNCPYENKYFPKFAEEYPGETTTILS
KLAEKHGIYLVSGSIPELEYGKIYNTCYVFDKNGALIGKHRKMHLFDIEVTGKVSFKESDTLTAGNDVTV
IDTEYGKVGIAICYDIRFPELSRLMALKGVEIVILPAAFNMTTGPAHWELSIRMRALDNQIFYVGAAPAR
NMNASYIAFGNSRISDPWGRIIAQADEKECIIYADIDRDLIPDIRQQLPLLKHRRTDLYELNTLK
>gi|260685805|ref|YP_003216938.1| quaternary ammonium compound-resistance protein [Clostridium difficile R20291]
MKWLFLFVAGLFEVFWAFQLKNSHGFSKLTPSILTVVGMIVSFYFLSLALKHLPLGTSYAIWTGIGTVGT
AIVGMAILNEPISISRIACIGFIVVGIVGLKLLSTN
>gi|260685806|ref|YP_003216939.1| putative phosphoribosylaminoimidazole-succinocarboxamide synthase [Clostridium difficile R20291]
MKKVYQGKTKDVFELDNGNYLLKFKDDVTGKDGVFDPGENSVGLSIDGIGRANLETSVKFFEILNNAGIK
THYVSANLEEATMEVLPAKVFGNGLEVICRYRAVGSFLRRYGSCVEEGAKLDCYVEATLKDDDRCDPLIT
SEGLEALNIMTQAQFDSMKSMTQKISNIVRDTIAEKGLELYDIKFEFGFYNDEVILIDEIASGNMRVYKD
GVIVDPMDLTALLLDK
>gi|260685807|ref|YP_003216940.1| putative sugar-phosphate dehydrogenase [Clostridium difficile R20291]
MKSVRFYGIRDTRVEDVDVPKILEKDDVIIKVKVAGICGSDISKYSKTGPHMVGEILGHEFSGEVAQVGK
EVRSFKIGDRVAVCPAMPCFECDECKKGLYSRCNNVAIIGNKELGGCFAEYTKVKERNLIKIPDEISYET
AAALEPVCIAGHGLFRSEAKVGDTVVVLGTGTIGLFSIQWAKIFGSTKIIAVDVFDEKLDLAKELGADIC
INAKEKNIVEEIKRLTDGDGADIVIESAGTPMTCGQVLLLAKKGGTVLYAGVPYGDVALTREQFEKIVRS
ELTVKGTWFGNSFPFPGKEWSAGLYHMQKGDMNVEKLVTHRINLEEVPAYFEKVYKRDIFFGKIMINIDN
>gi|260685808|ref|YP_003216941.1| PTS system, IIa component [Clostridium difficile R20291]
MIHMTGIIIATHGNMAKAMLESAELIVGKQENVETLGLNHGDSIDEFSRRLEDRIEKYKDEGVLVLLDFY
GGTPFNTSAIIINKFAKVCELECLTGVNLPMLLELFLNRDTMKLKDLKNLCEEVGISGIKDVKTVLKL
>gi|260685809|ref|YP_003216942.1| PTS system, IIb component [Clostridium difficile R20291]
MSNIALTRIDDRLIHGQVITAWCKITSAKRIVIVDDLVVKDPFIVQVLQMAAPSTVKVEVHDVESGAEVL
KSHNGDEHLIVLVKYPKTVLGLVNSGVDLKELNVGGMGAGLGRKSFYKNISVSDEEKEIFRELISKDVKC
FIQIVPDAKKIDVGTLL
>gi|260685810|ref|YP_003216943.1| PTS system, IIc component [Clostridium difficile R20291]
MHISLIQAVLIAIFYYLSWSPWLTYVGFFTWNRPLLAGFVTGIILGDPVQGAIIGAGINMIYLGFISAGG
AQMGDPAFAGYVGTALAIASKLDVSTAMAIAVPLGTVATVLWIGKMTVNSFFAHWADREVQKGNVDRVAF
INIVPPQILLFAMSFIPALLVVYFGPNAIDGMLEVMNENVLHVFNVIGAMLPALGIAMNLKLIGNKFTMP
FFILGILMAVYFKVDIIVISVIGVILALTITSIKYGKDSATS
>gi|260685811|ref|YP_003216944.1| PTS system, IId component [Clostridium difficile R20291]
MSDIKNEVSKKTLSKKDVIKSWLRWFFFAQSNYNYERLQSTAFSHSMLPVLKKLYPDKEELKQEVETHLA
FFNTEPICGCVIHGITIAMEEEKANGADEISGDGMNAIKTGLMGPLAGIGDTLTQGVITPIVLAVCIGLT
EGGASIAGPILFVIAQYIIMTSISFGMWTNGYKYGKKAVESILQGGIVNKVIEGASILGTLVMGGLVGRF
INLSTPISYTSGDFKFSLQTDLLDKIFPGLIPLVLTLLVLFALKKGLSPIKIMFILIVVGAITGILGLF
>gi|260685812|ref|YP_003216945.1| dna-binding response regulator [Clostridium difficile R20291]
MNILIADDEISMLKILCAYFKKENFNVFTAKNGEEALDIFYENKIDLAILDWMMPIIDGIEVCKEIKENS
NTRVLMLTAKSQSEDEIEALNIGADEYIKKPFDPRVLIIRAKKLINYKNTINIKDLKIDFGSSKVFKGDK
ELLLTKKELELIRCLINNKGMVLSREKLLDLVWGLDYEGDFRTVDTHIRRLRVKIGEDIIKTYRGLGYSL
EDFND
>gi|260685813|ref|YP_003216946.1| sensor histidine kinase [Clostridium difficile R20291]
MTKLNKKLSISISIVVVVVYIISIIINSMFIHRYYLHEKRNILDNVENEIKDKDIDKLKSDITLIEEKNN
IDIVYIELDKNHKDKGNIDKINQDLLNAFWKKGLSLNKFWIEENSLNNIDKKSINKIYNQGKTKYSLLVK
FIKKDNYLFAISIPIEHSEETIGIVNRFNIIMGIFSVVIITILTFILSNRVIKPMERLKFLSKDISELNF
RTEDIKTNDEIEELAYSINIMSEKLEKAHNELNKRNENLKTFISDASHEMKTPIALIKAYAIGMKDGLDD
GTYTDTIIEQAENMTNTINSLLYWAKYEKKERSLCLVDLKERLYKSLKNYELLIERGSISVKCSVDDKEL
IISSDEDSIDMVFNNLISNAIKYTNNNEIEINLFEENERIILSIKNGIDYNMGDDIENMWKPFYVLEKSR
SKELSGTGLGLTIVRTILEENNFRYRVEICDGIIEFYIIFIKVI
>gi|260685814|ref|YP_003216947.1| cell surface protein (putative hemagglutinin/adhesin) precursor [Clostridium difficile R20291]
MDKGEENKMKIPKKIAAMLTVTMIAGSSTAGIASAQTVATNLTGQERYETAVKISQDGWKNADEVVIVND
SSIADALSATPFAKAKNAPILLTSKDKLNDKTKAEIQRLKAKKVYLIGGTSVLSTNIEKEIKDLKISFER
ISGAERYQTSLELAKKLDAISDVKKIAVVNGEKGLADAVSVGAPAAQNNMPVILADSKNGTAVADKFIKD
AGITQSYVVGGESSISEAVKNKLPNSTRLGGTDRNDTNAKVIKEFYKKTDLKNAYVTKDGMNKQDQLIDA
LAVGVLGAKNQSPVVLVGKNLSASQKSLVNSKSFDKITKVGGNGNETAFNEMKSLQEVKTVEAKTISELK
SAIDKATANDVINFKPTSEVKEAFTIQTDKAITVNLNGTYTKTVTINMPNGDVNNYAKVDDVVIDDVKDG
TFVNYGKITNLKVNDKNGAKIENNSKGEIGSLTVASGASQVKVTNGGKITTVTNNSKGTTIDNKGTISSV
KGDNSPTISGNSPSSNSSGGSSSSGGSSHGGGSSSSKVDKVVLKNTITAANKLYNEAIEGTNVGEYKVGS
KAIYKTAIDKAQAILDKSGVTQKEVNDAVTALNTATDTFKAGKVVAVDKTALQDAVTAATALHAKATEGT
AEGNYAVGSKATYKTAIDEAQAILDKSDATQKEVNDALSALNTATETFEAGKVVAVDKTALQDAVTAATA
LHNGATEGTAEGNYAVGSKATYKTAIDEAQAILDKSDATQKEVNDALSALNTATETFEAGKVVAVDKTAL
QDAVTAATALHNGATEGTAEGEYAVGSKATYKTAIDEAQAILDKSDATQKEVNDALTALNTATETFEAGK
VVAVDKTALQDAVTAATALHNGATEGTAEGNYAVGSKATYKTAIDEAQAILDKTGATQKEIDDALSALNT
ATDTFKAGKVVLNKTALQDAVTAATSLHAGATEGTAEGNYAVGSKATYKTAIDEAQAILDKTGATQKEID
DALSALNTATDTFKAGKVVLNKTALQDAVTAATSLHAGATEGTAEGNYAVGSKATYKTAIDEAQAILDKT
GATQKEIDDALSALNTATDTFKAGKVVLNKTALQDAVTAATSLHAGATEGTAEGNYAVGSKATYKTAIDE
AQAILDKADATQKEIDDAVTALNTATATFEAGKVPTTIALMLSRILGFMK
>gi|260685815|ref|YP_003216948.1| D-alanyl-D-alanine carboxypeptidase [Clostridium difficile R20291]
MEDEILKGKIKQLTILALIFIFITPVFAFADTPPVPNSSRAALLIDQETKRILFEKNIDEKMPLASLSKM
MTFLLAIEAVDKNQVKETDMVKIDKSTASVGGSTCKLKDGDEISLGELMQGLMLVSGNDAAIAIAKHIGK
TEKNFVNMMNKKAEEIGMIDTYYFNPNGLPIYTDPEHKEPPIENMSTAHDIVTLGKYMYDHYENQVTRIT
TMQVYNDTKKDFTHYNTNPLLVSVPGVDGIKTGYTDNAGYCLAFSMMVPKDAKNERNHRLIGVVLGDGNK
KNRISSSATLLKYGKDNFHSKKIAHKGDIIETPCVDGIDDFKITVKVDKDLYGVVSDNENINPKVVFKNM
NYPIHKGDIVGVAKYYNDSGKFVGSVDVKSESNIGCIPLKDKIKIKVAKINKKLEIKNSVCFKV
>gi|260685816|ref|YP_003216949.1| putative transcription antiterminator [Clostridium difficile R20291]
MLRKDKVLLSLHKLCENMTLKDLQSDKTGFTTIEIANHSSLDRSNTSKELNNLYNEKKVLKISGKPILFL
HVSIIENLIGRTLNSDEFSINNCNELLKSSKNDSEDIFSTLLGHDSSLKLPIEKAKSAILYPPKGLNTLL
IGPTGVGKSTFAETMYKYAVESKIFSSESKFVVFNCAEYAENANLLLSNLFGYVKGSFTGANKDKFGIVA
QADGGILFLDEIHRLPPEGQEMLFLLMDKGIYRRLGESDIVHKANVFIVCATTEDIHSSLLGTFLRRIPV
TINLPALQDRSLKERLSLIKYFFIIESKYTNATIKVHKDVIKSLLLYDCFGNIGQLKSDIQLMSARAFLN
YKTGLKDNIEIDLSLVPDYIYIGLLKLNENRSNLNKLSELDYMLFYEFNGNNLEVEYTKELSKYNIDTSN
NGFKYSTEIPYLENDIRSMFINYMEKYSTKLLSISSVTHSDYTSNEIFKVINPKIYYAVEHSLKEAEKIS
RNKYTKQTYIALSMHISALIENINQDTYNPKYNLYNDKIFLDKDLNISKIVLSIIENDLQTSLPKDEVKF
ISMFLNSMYLEPNNQSESIGVIILAHGNSTASSMCDVANSLLGTNHCNAIDMPLDVKVSTILDKTIELVK
ECDEGKGVLLLTDMGSLIAFGELISEKTKIKTRSIEMVSTPIVLEAVRKSTLPEMTLDELANSLSSLNPY
IGRAAIDSTEINYPEKSREYVIITTCITGYGSAMKVADFINSSLKNIRKYNINLVPHNIESFKMYKNKFS
NTKILAVVGSVDFNVANTPFIHIEELLNGYGLDMLNKIIEGTFNANSITNIKETNLSYNSLIINFMTQNL
ELLDSVKLFNYVNSSLFTIIELIDENLKSKFKLGYILHCSFMIERCFKNTTFPYNNITELISKNHELYSL
IREAFKPTEAYFNILIPDEEIAYIIDMINEYLNK
>gi|260685817|ref|YP_003216950.1| hypothetical protein CDR20291_0443 [Clostridium difficile R20291]
MNNTIKEWEICFVDIDRILNFSSNAGKAMLQSGGETYRVEETIARICQSFGIDHVDVFATPTAVMASVFV
DGKLHSAIKRISSRRVDLNLVHEVNSLSRAISINNLDIELCEKILDEISEDNYYSDLITIFFAGIAAATF
SILFGGNVEEFIAAFTVGILTKFVIMYLSKSSLNDFFVNAIGAVIIASCSILILKLGFIKTLDHLIAGAI
MLLVPGLALTNALRDLLDGQLISGLAKLAEVFFVGVSIAVGMFLVLGLYFKLGGI
>gi|260685818|ref|YP_003216951.1| hypothetical protein CDR20291_0444 [Clostridium difficile R20291]
MHLFIEVIAAFFTALSFGVLFNMKGKNLILAGIGGSIAWFSYKFLLNMGVTENLCFFIATVCFAIYCELC
ARIYMTPATTLSVCCLIILVPGYGIYNTMYSVLTNNYIKAVEYGVSTLSCASSIALGLVFITTVFRKVNL
YGVLTKIKENEKYKKSINKIKQQK
>gi|260685819|ref|YP_003216952.1| hypothetical protein CDR20291_0445 [Clostridium difficile R20291]
MEKLSDKRRVKAVSMETFVFIVLLAVGFGYVGSIMGAGMMFKVIMSTAHALLLDTVFLIMAMAVLAGALS
ALLSEFGVISLVNKIFKGLMRPIWGLPGASIAGVVATYLSDNPAIIPFAKDKTFTQYFKKYQVPALCNLG
TAFGMGLIVTTFMIAQGKEYVLPAIIGNVGAIIGSIISVRIMLTFTKKYYNYDPKNDTEKQINDKGAKLE
EFREIRDGNVFQRTLDAILEGGKLGVEMGMAIIPGVLVVCTLVMLLTFGPSTDPATGQAVYTGAAYEGIK
LLPAIGDKISFIIEPLFGFTSPEAIAFPVTALGAVGAAISLVPEFIKSGAITPNDIAVFTAMGMCWSGYL
STHIGMMDALDARPLAGKAILSHTIGGLCAGICAHFIFMLVG
>gi|260685820|ref|YP_003216953.1| two-component sensor histidine kinase [Clostridium difficile R20291]
MKKERLQHEDLKEYDYDEDGYLSKKIIIKDFIKTILVMTIATGISVVFEKVGFNESNIILVYILGVLFAT
SITYGYFFGILSSVIGVLSFNFFFTHPLYTFLAYRKDYPMTFCIMLMAAIITSTLTSRIKREVRLSHKRE
KMIRLLYENNKTLLKAKNKNQIIEFCGSNLVNILNRTVIVTIADENNNLGKPSIYICNNDGSENIFHSVL
EKEAIKEAFRTGNPVGIGTKYCKNSSAYYFPIKGQESNVLGVIGVACFKIDIITENEKILLEAVSTQVAL
AIDRENLFEKNKKANLEAERERLRGNLLRSISHDLRTPLTSILGSSSTILENDDVIDKETRVELLKNIYE
DTSWLTHSVENILSMTRIDEGKLDIEKRPEVVDEIIAESILRVKKFANSRDIKTNIPDEIIIVHVDVLLI
EQVLVNLIDNAIRHTPKNSKIELTVKKESNQVLFEVADNGKGIPNEDIGNIFNRFYTKNKSRNLERRGIG
LGLEICKSIVEAHGGEIVAFNNPSGGATFRFSIPMYDEEGKDKWK
>gi|260685821|ref|YP_003216954.1| two-component response regulator [Clostridium difficile R20291]
MEIKPLVLIVEDDKPICKFIKVSLETQNYRCVETDNGGTAISLIHSLDPDLIILDLGLPDIDGIEVIGRV
RACAKTNKIIVVSAREHERDKVEALDGGADDYLTKPFSVTELLARVRVALRNKAQQDNINNDAPKSFEVK
NLKIDYENHIVSINGEEIHLTPIEYKIIELMSKYSGRVLTHKFIIDKVWGNYYESENQSLRVFMASIRRK
IEKNPAQPEYILTEVGVGYRMADE
>gi|260685822|ref|YP_003216955.1| putative signaling protein [Clostridium difficile R20291]
MDVINLIDELDEIVYVSSLDTYELLYINEIGKKAMGINDISHVKCYKALQGKDSPCEFCTNSILKEDEYY
IWENTNTRTNRHFILKDKLIKWEGKHARLEIALDITEKEDISKSIAEKLEIKELLVGCIKHLITESNFSD
AVNLVLTNIGKFHKADRAYVFEVSEDRKKVTNTYEWCNEGVDEQKQALTNLDINELKNWFLLFEQKGFVI
IDDIENIKEEQPIEYEILKPQKIESLMTSSLKQDDKVVGFIGVDNPHKAVGDTSLLTSLSYFLLTEMKKR
KVENKLNYMSYYDFLTGAYNRNKYIKYIDNFQKGKFKSIGVVFVDINGLKDINDNFGHANGDSAIVSACV
IIKKYFHSYNVYRIGGDEFIVLCEDISKQLFEELVSWLSEEFKDEMIYSVAVGSIWSDDNIDIHKLIKVA
DERMYQDKKRYYNKNKLRNNEMEVISDLADSTNNILFKHKELVDKVYFDDLMIKGYSKAYEKLAYNTYDI
ILSICIDTNLITPIYQSESNIFSFPIKENLEKTFSYIKKHLIHPDDIILFDDNHLLKSLDSLNNSKQDDL
ELNFEYRRLGIDKKYYWALIYMLKISSKNKLGEKQTHILVAIKNIDYLMQLHKNQKDILTGLYNYESFCE
QTSLMLKRYPDKSYAIIMMDIDKFKVINDIYGVRGGDKALIYVAELIQKNIGSNGICCRMYADVFCIFYE
SYSDRDVHKLIYKIKNSLNRKKFEYMLVPCFGVYKILDNNIPITNACEMAGYAHKKVKKQSINNYIFYDD
TIRNDALEEKQMEREMEYALENGQFHVYLQPKYNLNANKIVGAEALVRWVHPEKGIIPPIKFISLFEKNG
FIIRLDMYVWEQVCSLIRKWIDLGEEPVPISVNVSRLHLHNPHFKEIVLSLINKYSIPKSFLELELTESL
FIKNIKLFTKIIADLRMDGIVLNMDDFGSAYSSLNMLKNINIDTLKIDCGFFNEEGITDREKIVLRHTIA
MAKDLDMDVVAEGVETKEQAEFLVSLDCVVIQGYYYCKPIPSADFEKLLYQK
>gi|260685823|ref|YP_003216956.1| putative transcriptional regulator [Clostridium difficile R20291]
MIVGIIGPSDSGFKIKDDLKQIDSDLKTKIYVREKVVDTIEVISKCEDECDAIIFTGCAVYEFIKSKYEI
SKPHSFVPRSGTSIMKAFWAIKSANIKLDKFSIDVVDRYVVEDALKEFDIKATSVFCNPFSLEVGESELV
EWHIKLFEENKTDIMLTGFGAVYNELKERGYPVFRLQATIQLIKESYDKVKSEYALSKARFSQIAVEILS
LIDYKEKIDNYYSDMIKKSDMDKLVVNYVRSIQGSLFLLGRNDYVVFVHKGVADNEYNYDKLFNLKREIK
DMGFSLSIGIGTGVTAYQAENNAHKALRHSIDSKEIGIYLVDEDENIRGPLASENELNYSLMLSDEKVIE
ISKKTGMSCESVAKIIAISENRKSKIYDSKELAEYLNVSERSARRILNKIVNAGLGRICAKETSIGGGRP
KNITEILF
>gi|260685824|ref|YP_003216957.1| putative peptidase [Clostridium difficile R20291]
MLDKNRLINNFMDMVRIDSPSNQELEMSKWLVNYLKERNIDAIIDDAGEKYGGNTGNVIAYIKGEEGSRP
LCLCAHMDQVQPCLGVKPILDGNVVRSDGTTTLGADDKAGIAAILEALEHVTTEKIPHRDIYLCFTICEE
AGMHGVKNFNPDNLPCKDMVILDSGGAIGSIAYKAPAQQSIKISFHGKKAHAGIEPEKGLNAILVASHAI
SNMHIGRIDPLTTSNIGKIEGGGATNIVTDKVTLTAEIRSHIPETLEYELNHMEKCCKDAASKFNTTYTF
EHSMSYPSFELSRDSHVFKLSEEAIRQVGVVPNPMVIGGGSDANILANLGYNCAILSLGMYDVHTVNEYV
NIDELYDTAKIVYHMIKL
>gi|260685825|ref|YP_003216958.1| putative aminobenzoyl-glutamate transporter [Clostridium difficile R20291]
MNDNVVKKKNFFDRTLNRIETVGNKLPDPVTIFLGLCVLLLILSSLVGSMGISVVHPGTGETITAVNLLT
VEQLQILLGNIVSNFQGFAPLGLVLVTMIGAGVCDKTGLMTATIKASVSKIPETRVTLVVMTIGMLANIA
SDAGTILFPPLAALVYLGVGRHPLIGLFSGYAAVCLGFAANIMISVNDILAASFTVPAAQMIDSGFQANA
TMNLFFMIASTFVLILLATWVTEKIVAPRFGKYEGNAELDVDGSLSDVEKKGLKKAGISILIYVAIIVAL
SVIGKKPFLADPETGDLLSNNAPLMKGMVPIIALAFFIPGVVYGKTIGKIKKDKDVVSIMASAMSDMGGY
IILAFAASQFLQLFTNSNLGLILAVKGGEFLKSAGINGPLLLIGFIILSCFINLFIGSASAKWAILAPIF
VPMFMMVGYNPALTQMAYRIGDCITNPLSPLFPYFPIILAFTRKYDKDAGMGTVIANMIPYSISFLIVWT
ILLILFMVFNIPLGPGILPSYSM
>gi|260685826|ref|YP_003216959.1| metallo-beta-lactamase superfamily hydrolase [Clostridium difficile R20291]
MFNAGNRIINTWLYPIQDGFVLIDTGYENGFKHFKKRISKFNIKIKDIRYIFLTHAHDDHVGFLNQILDE
SPNTKIVMHDKALEILYKGQNSFIGGCNSRTAFLFCQIMKLFGKGEHSFSPLKQEFEKRCILVSDKNRKE
IEKELNGKIIDTPGHTADSISLLIDDGVLFCGDSAMNGFPSTHKITIFAESKLEFIQSWKTIINTKPKMI
YPGHGKPFEYSKLEQNLIYVNKINLYPLHNSKDIHRFL
>gi|260685827|ref|YP_003216960.1| putative amidohydrolase [Clostridium difficile R20291]
MNKEQLKSLVIKTIDENREKILKIGQGIYKNPEYGYKEFKTTEAVSNFFEQELNLSVEKNIAVTGCKADA
NSSKKGPHISILGELDGISCKEHKDANEIGASHTCGHNIQIAGMLGAAVGLVKSGVLEHLDGKVSFMATP
AEEFIELEYREQLKKEGKITYFGGKQELIKRGYFDDIDISMMFHASDLGEDKALVGPESNGFVGKKVKFI
GKESHAGSAPHDGINALNAAMLAINNVNALRETFKESERVRFHPIITKGGDIVNVVPADVHMESYVRART
INGMIDANERINKALMAGGMAVGADVEITEIPGYLPILRYKSLDNLFKNNLEDLGLKGKVIDGGDFTGSF
DFGDVSHIMPTLHPMIGGVKGALHTRDFEIVDEDLAYIIPAKAMALTVVDLLFDNAKDAKDILDTFTPVM
TKEEYLTFLEKHDKTL
>gi|260685828|ref|YP_003216961.1| hypothetical protein CDR20291_0454 [Clostridium difficile R20291]
MFANLNLKKSSYQLLVMSVIGVIILIGQRISVGTSIVTALPGMVMLILAAMAAMIIKDLFPKSIFPAFGF
ATIIGLLLSMPYSPTSEVFLTNTNNINFMAITTPLLAFAGISVGNKIEALKEMSWKIVIISLIVFTTIFF
ACASIAHIVLSIQGKI
>gi|260685829|ref|YP_003216962.1| hypothetical protein CDR20291_0455 [Clostridium difficile R20291]
MEINKKHFIQVFLTCLILVVICEFIGQRTIAIGKASIVLFPMLYAVIIGLIITPDLLGKKIKALKKVVGE
KEINIAGEVVGIALVMLGIKYGTTVGPNIDKIIQAGPAFIAQEFGHILAPIVALPLALMFGMKREAVGAT
ASISREPSLGVISEKYGINSPEGSGVLGTYLMGTVLGTIYFSVLGSISIYSGLHPYALGMACGVGSGSMM
TAAAGSLSTMVPPEMADTILAYAATSNMMSSITGIIFLVFVSLPFTNFMYKILEPKFSRNKKTKEIKSTE
GEC
>gi|260685830|ref|YP_003216963.1| DeoR-family transcriptional regulator [Clostridium difficile R20291]
MKINRLTEIIVILLNKKLVTAKELADRFEVSTRTIYRDIETLSMSGVPVYMTKGKGGGISLIEEYSIDKA
ILSKKDKESLIVALKTLQATKYPEINSVVNKIGSIFGEQNFSNWIEIDFTEWGSNFNEDDKFTKIKEAIL
RRNTINFNYVNSLSSQTNRTVEPLKLMYKSKTWYLYGFCKLKDDFRIFRISRIRNLSIKDEVFSRKIIEE
VCLNDSKVIKENTITLKLRFKEKMLFRVFDDFNKDLITKNEDDTYDVITEFPIGEWIYGYILSFGDNVEV
LEPKDVRDNVITRLRELSKIYSL
>gi|260685831|ref|YP_003216964.1| hypothetical protein CDR20291_0457 [Clostridium difficile R20291]
MNYEIVEINEKIVIGISKETTNKDGQAVNAIGELWKKFMGKGIYNAIKGKKNDKTIGLYTDYQGDFTSPY
SFVACCEVNSNSDKEKNLEELNTNNTVGESIISKVILAGKYAKFVIVGGQKEVGDFWFKFWQMDFDRTYI
SDFEEYQCNTFDTKKQEIHIYIGIK
>gi|260685832|ref|YP_003216965.1| chemotaxis protein [Clostridium difficile R20291]
MENKILIVDDAIFMRMIIKEALSKSGYNNLIEANDGEEACNIFKYEKPDLMLLDITMPKKDGLEVLREIK
KLDSSAKVVMCSAIGQENMIVEAIKLGALDFIVKPFKTETLVKVVNNVLK
>gi|260685833|ref|YP_003216966.1| chemotaxis protein CheC [Clostridium difficile R20291]
MINSNVEVLIPMVKILEYNEATNLLGGPENKVVCILLDMKGDINGMFMFLLDESITQLMLSSLFNKEEAF
LDEIEAIEISAIKEIGNIMASSYVNAIASMLNMTISVSIPDICIDMVGAVLNVPMIRFSDVGDKVLFIEN
KFKMSDNYFTSHILMIPEMSSLREILVRLGLEV
>gi|260685834|ref|YP_003216967.1| chemotaxis protein [Clostridium difficile R20291]
MNREIVVNIADMKIAYRPNVLVTYALGSCVGVCLIDKVAGIGGMLHVMLPYSKDAINIENKCKFADTGIN
ELIKSMENIGANRIYIKAKIAGGAQMFLGSSNSVIASIGHRNVEAVKKTLLGLNIPILAEDTGMNYGRTI
RFYTETGELLVDSINKGKKKL
>gi|260685835|ref|YP_003216968.1| chemotaxis protein [Clostridium difficile R20291]
MRFPDDPYLDYGLIDEGIKYLKFKVDEQDFGVELEKVIEITGNQEIIFIPELPTYSKGIINLRGKIIPII
DMRLRLKKDELMTTNCMYIVVTEIKDLVVGFVVDRVDDIVSLEKSKISPPPRVTIEYSDYFVSGVGELEG
KIITLLDLEKLLTDKDEVLIDELINGFDCTIM
>gi|260685836|ref|YP_003216969.1| putative chemosensory protein [Clostridium difficile R20291]
MFKRGLYMKNKQQGTILVVDDSVLMCDLIDKTLTKDNFKVKKAFNAIEAKEFIEEFIPDIILLDIILPDN
SGFEFCKEVKSNTRTADIPIIFITSKNTDTDIVKGFGVGAIDYMVKPFSMTELKARVIAHLEVKKSQDKL
KKINNELESSLEKLNRLVVRDYLTGLYNRRHIINQLMEQRRINKYSETSISLILGDIDDFKVINDTYGHE
AGDFVLTVISSIIKKNCRQIDTVSRWGGEEFLIMLTNTPIEGAKILSERIRKEIKEFDFNYKEHKIKCTI
TLGVVEVNSNISLEENISLADKAMYEGKNLGKDCSVVSTMKGLKKI
>gi|260685837|ref|YP_003216970.1| putative methyl accpeting chemotaxis protein [Clostridium difficile R20291]
MKREVKLSKLAIVLLIIIVLAVLAGIFSSISSYKAFEKVEKSINDMNNLRTQSQYIKDTTREISDVLRRY
VFTGEKKNKDIYEKELYGKTRESALNKLEKIGLTKSESNKILEAKEISDSLVPTEQSAIKAVESNDKSKA
QSIIFGSDYINSQEKMDSLINEFQEDIVTRSNSKIVEVKKELQSLILRTIFILSLLIILTIIEYTVIKLK
IVIPINRVEKHFSRIASGDLRTSIDVEESKSEIGLLVSSVKKMQSMLLNYIDLIDSTLTSIAKGDLRVEI
DQEFIGDFKSIKISLESIINSFNGDFSEINLSAEQVASASEQVAAGAQALSQGATEQASSVEELASTINE
ISDGIKKCADSASLACEVSDQSASQVGFGSRCMDDMMTSMGEISEKSSEISKIIKTIDEIAFQTNILALN
AAVEAARAGQYGRGFAVVADEVRSLAGKSAKAAQNTAILIEEAIKTVENGVRIAKETANALDLVVNGVEK
TTNYINGISSAVHSQEVAITQILSGIEQISIVVQMNSATAEESAAASEEMSAQAQILKELVEKFHLKESE
VRESSWV
>gi|260685838|ref|YP_003216971.1| chemotaxis protein [Clostridium difficile R20291]
MINVNYIEPSMRQMLDMFIFETSLLLEQLDEIMIQIEKEKVFTHNNINETFRIMHTIKGSASMMGLDNIS
ALAHSVEDLFYAIREGKIEVLDNDLLFDLVFQSLDFIRRDIDELQSRGCISSDYSNFIEGIEEYVSTLEL
SSSMKSKDNANLESTDEKEAIDSNFEYKEDSDVVKIIFEQGCMMENVRAFMLVFELRDYCEFIDFYPKDV
ETNAESTEYIKSYGFYIQFVAKEDKAIVYKTIEDNLYVKEYINISKKEIEMKNTSNNDAVENKLKDNNKV
SKSYQNNYTEDEIQEDVLNEKTDMEKDSLSEENEHLPISKQSIMSVNLEKLDLLQNIVGEIVIMESMVVN
SVNSTGVDIDNFNKATRQLHKLTDELQDIVMSMRMIQIAGVFQKMHRIVRDMNKKLDKNVELITIGAETE
VDKNVIDNLAEPFMHLIRNAMDHAIEPIEERIAKGKEEVGKIVLSAENLGGEAVISISDDGRGIMRDKIL
AKAKEQGLLKHQINEYTDDEVNSLIMTPGFSTKESITEFSGRGVGMDIVRKSIEKVGGSIEVKSKQDEGT
TFTIKIPLTLSIVEGMKFKVGDSLFTLPISSIRRTFKLTDLNQIITEGNKTELITIYGACIPIIRLHKIY
NIQTKVTNLMHGNMIIIENEHKAVCIFVDEIIGNQQVVVKPFPVYFNRFNIKNKGLSGCTILGDGSISLI
IDADSIIEIY
>gi|260685839|ref|YP_003216972.1| chemotaxis protein [Clostridium difficile R20291]
MAKDEIIKQVLTFYVNDVIYGIELENVIETIRFQSITYVPCLPTYISGVINLRGRIIPVINMHIKYNLPK
ADYNERTCIIITKVDEYQVGIIVDKVVDVIHIENLNLLETTNSNNTNINKDIKEIAKVEDNSILILDIRK
FLINSI
>gi|260685840|ref|YP_003216973.1| chemotaxis protein methyltransferase [Clostridium difficile R20291]
MIKLTDEEFIVLVNHVKKEYGIDLSKKRALIEGRLYNTMIEKKLSSFSQYMNLLFKDKTGNEAINLINRL
STNHTFFMREPQHFEFIQNSILPFWEENNKIRNINIWSAGCSSGEEAYSIAMTLDDYFGYNKELWNIKII
ATDISTNSLEKAKRGIYIESNVNNVPELWKKKYFIDNKDGTFKICDKIRKSVIFKSFNLMNDFSYQHFDL
IFCRNVMIYFDLKTREELINKFYNATKKDSFLFVGHAEVINRSSTKYKYVKPAIYKR
>gi|260685841|ref|YP_003216974.1| putative chemotaxis-related protein-glutamate methylesterase [Clostridium difficile R20291]
MVIAIGASVGGTEAILEIIKDLPKSTPGIVVVQHMPAIFTYMYAQRLDKQCIMNVREAKNNDRVEQGNVL
IAPGGYQMKLCTDKQGYYVTCEKGERISGHCPSVDVLFDSVAEVAGKNSIGIILTGMGYDGANGLLKMKE
NGLFTIGQDENSCIVYGMPMVAFDRGSVMLQLPLGEISNCLIRHINILKQKD
>gi|260685842|ref|YP_003216975.1| hypothetical protein CDR20291_0468 [Clostridium difficile R20291]
MKFFKVDTKAKVLRYVFVLTLTIMAVLAIKHDYKYNNLRKDASINLNSNKEAVTVMSNQSLPKGNTNSKQ
TLSVSTIGSKTIVKNDEYLESTINMPVITNSNKIVERSTNDKIKNDIFEFYNKSYKEAKQYLKDNPDEKN
KFVANVDFELKKNTDSALSIKVRYYTYSGGAHGFYQDIAYNVDMRTGKFLELMDLFKDNTKYKEVIDEEI
KRQIAELEKKDEENIGIYNFKGIKENQNFYLQDENLVVYFDLYDITPYAAGIPEFSINKALISSMLKPEY
VDLFDLK
>gi|260685843|ref|YP_003216976.1| putative ornithine cyclodeaminase [Clostridium difficile R20291]
MLLLKKDDIKKVFTMRDAIEADKEAFRIYCEGKSVNPLRTNISVPSQDASMLFMPGYVEELGCGGIKIVS
VFPKNAQKGKPVIPATVLLLDGETGEVSAVLDGTYVTQIRTGAASGAAIDVLAKKDSKIGALIGLGGQGE
PQLEAMIEARNLDEVRVFSRNRESREKFAEEMNLKLSKYNTKIVAVESSDEAIDNADVIVLATPSKQPVL
NGNLVKKGALISAVGSYMPDMQELCPNCLTRASKIFFESTDAVLSESGDILIPLKEGKISKDDFSGDLGN
VINGTIPGREDDDEIIVFKTVGIGVQDVVTAKRIYDKAKENGIGIDWKW
>gi|260685844|ref|YP_003216977.1| putative lipoprotein [Clostridium difficile R20291]
MKMVKKLILSTIMALVLVLTIGCSNAEEKVKSNFEANLAALEMYKYDEKGISDALTEAEYKQIQTYNSKD
KVSMIAQLTPLYGKENAEKIYETIVKLIQGVEKTVTVESSSKDKITLKVVSKALDTSKVMSEANTLVKSY
VTDEKNYDKKEKEVQDDMTKMIIDLYNKKPTKEVTTMITYTKKDGKWQPPSNIQKLCEGIYTI
>gi|260685845|ref|YP_003216978.1| hypothetical protein CDR20291_0471 [Clostridium difficile R20291]
MKGVFFMVSRQELKRVSKAQLSGNWGICAISMAVYIALIVLISIVGLPFEPLTTIVVAVIAFCVSAGFTC
MFLKITKDEKVKIGDIFVSGRIYLRSFGFYLFESIIVYIYSFIITIIGAFLSFGVLLTSGAIEYLSSDNV
GIGTIISTGITLVLIILVLMLPVYILLLYVSQATFLICEDKDNMGVFKSMGASLDMMKGNVLKLFVLNFS
FIGWYILSIATLGIGLLWLIPYVGVTNCNFYRQLVKENPDVEDILLDKEKSYTMY
>gi|260685846|ref|YP_003216979.1| putative penicillin-binding protein repressor [Clostridium difficile R20291]
MEIKLFDSELKVMEVLWERGESKAGELVKILKEETGWNRNTTYTVIKKLVSKGAIERIEPNFVCKALISK
EEVQKQETETLINKMFGGSSEKFLSAFINKENLSSDEITKLKQIVEKLK
>gi|260685847|ref|YP_003216980.1| putative penicillin-binding protein [Clostridium difficile R20291]
MFIKLLEMSFTSGVLLLIVIFIRACLFKKLPKKVFVLLWLIVLFKLLIPVSLNSGFSIYSIIESTFDVEL
GNTSTENYTLKKASDSTGKNNSDEFEIMSNIENIMMLEMLGILSFIVTIMFSILLCFRYFKIINLFKTSI
HIKNHEFIKKWMCKNSRFRRFIVCISEFTRTPLTSGILKPRIILPKQMNYANNQTLDFVLTHEMVHINSF
DNLLKLFMLVALVVHWFNPLVWVMFFLLNKDIEFSCDEKVMSILGEEYRADYATTLISLAEENNPFSMTI
CSGFGKTKIEKRIVNIMKFKKSTYVTFLVSTVLVCGTGLVFATENKEINEVESFGLTKNEQSDKSGFSIS
SKSTDLYSPKVESDILVSKAKSDGETHFSTAKVSVIEFREHEESSMSKVTNSENSEETYVNKSSNSKDVL
YTDSGEVSIEQSNYNDNRFVISRKGNLLAVNKEQYRTWIE
>gi|260685848|ref|YP_003216981.1| hypothetical protein CDR20291_0474 [Clostridium difficile R20291]
MKIKKSLISAMMVSAMVLGGTGAVFANGNDSSNIALPKLESLIKSGITDPTELEKYGVEHYTYEEYAKHI
QELKDYAKDPNAVKDVSQKDLEETIKKMEQELEKIKTEGLKIMKPITIENEDGSQISIAYNYAAID
>gi|260685849|ref|YP_003216982.1| hypothetical protein CDR20291_0475 [Clostridium difficile R20291]
MKKGDFIWSGVLICIIAVLAIPSSREVFMEATGAHPYIGGFLKFAVLATMGDLLGARILYKDWKIPVGVF
YRAIVWGIIGVVTTYGMSIYSSGVGQAQVDGMLPFEGIAFANALFKSATMNILMSPTVFLFHKVMDCFID
KKYEVGKGIKVKLKDVVNIVDWNAYLGFSVLKTIPFFWIPCHTIVFLFPAEYRVIASAFASIALGLILAL
ANKSKVAV
>gi|260685850|ref|YP_003216983.1| putative spore cortex-lytic enzyme pre-pro-form (putative spore peptidoglycan hydrolase) [Clostridium difficile R20291]
MQDGFLTVSIIDATNNRPIQNAVVNIYSMSNGSQSSSTLYQNLRSNESGQVTGLVLPAPDVDYSLQPSDV
RPYSQYIVEAIADGYETVVIEGTQLLATIVARQGVPMSPRTRSKRSFSRQSELIFDIGEHTLYGTYPPKI
PESNLKPLPPPTGFVVLDNPVVPEFIVVHDGLPEDSSAPNYWIPFKEYIKNIASSEIYSTWPEQTIYANV
IAIISFTLNRVFTEWYRNKGYNFTITSTTAYDHKFINNRNLFEPINVVVDAIFNTFIKRPPTSRQPLLAQ
YCDGQKSQCPDQMTQWGSKDLGDQGYDYESILRYFYGDEIVFERAPIVSGVPVSFPGTTLQVGSSGQYVR
TIQNQLNAISNSYPAVPKVIEDGIYGADTENAVKIFQGIFGLPQSGVVDFKTWYEISRVYVATTRIASLN
PLI
>gi|260685851|ref|YP_003216984.1| putative spore-cortex-lytic protein [Clostridium difficile R20291]
MKLDLFLLAIVPILIGMFWIRSKDRYCREPLIHLIKFFLIGAFLSVIIILLENLLMKFNVFEGYSELIYV
SFVVAGLVEEGVKALILIPALIKEKHFTEKLDGIIYSVFLALGFATIENMVYIFSESRNLALQVGINRAV
ISIPAHVMFAITMGYYISKYKFEGNKNKRREYLFMAVLIPILLHGVFDFILMIEYRWAIILLIVYVIILW
KINLDKLEKYMNHSKKVFFGNLRKKKKK
>gi|260685852|ref|YP_003216985.1| putative methylase [Clostridium difficile R20291]
MTELPKEFLEDIEEILKDEYDDFIKSYEESKTTGLRINTLKIDKKKLFDLELFDLNQIPWAEEGFYYDDK
IDRPGRNPLHEAGAYYLQEPSAMSVIPKADIKEGEKVLDMCAAPGGKSTYILSKLNDTGLLVSNEINASR
IKALGENLERFGARNCIITNTDSNSLRKTFNGYFDKVIIDAPCSGQGMFRKDEVAISDWSYAKVVECQSI
QKEIIRDGYKMLKKDGILIYSTCTFSREENEHVINEFISEYPHAELIEMERLWPHKIKGEGHFVAKIKKL
EEEECNVKELKIKNLDKEIKDYREFEKKFLKVDFYSNKKNKFYLRGENLYLLPEIYPDTKKLKVLRYGLH
LGVLKKNRFEPSHALSHYLKVEDVKNVENFSVQSESILKYLKGDVVNSNDSRGWVLVSVEGIPLGWGKES
SGVIKNHYPKGLRKVF
>gi|260685853|ref|YP_003216986.1| signal peptidase I [Clostridium difficile R20291]
MGEAVKKEVVEWIKVIVIALVLAFAITRFIVPTIVKGESMYPTLVERDYLIVNRIAYKVGEPKYKDIIVF
KTDLTEENGKKKDLVKRVIGVPGDHVKIQDSKVYVNDKLLDETSYIHNNRTDGDIDIVVPEGKLFAMGDN
REKSLDSRYDEVGLVDEHTILGKVLVRLYPFSKIGTID
>gi|260685854|ref|YP_003216987.1| singal peptidase I [Clostridium difficile R20291]
MNETIKEEIVEWIKIIITALFFAFIITRFIKPTLVNGESMYPTLKSHDYLVANRMTYKLSEPKCGDIMIF
KTDLLQENGRKKELVKRVIGVPGDHLKIKDSKVYINGKLLNEVSYIHDNYTEGDIDMVIPKGKVFAMGDN
REVSLDSRYKEVGLVDEENIKGKVILRVFPFTDIGIFE
>gi|260685855|ref|YP_003216988.1| putative endonuclease [Clostridium difficile R20291]
MAVGIASLLFNIEEALNICESIKQITHLEIGIDNISECSELCKYKERISKLGLSIGIHLPMELNTCENIE
YIRNSWINFIEKIEFELKGFDIRYFNLHLGYVMTNRVRKNRDKYLGNSVDFLDKLNTNSYVCIENTYSKG
GDFSNIGNISYDFEYIFKRIKNSKICFCYDTGHCLIDEDAYVKNLKDKIRLIHLSDNDGINDTHVGIGRG
ILSEEGIKEVLTLDAEYLVLEINYEDIEDTISKLNNIVREG
>gi|260685856|ref|YP_003216989.1| putative phosphoribulokinase/uridine kinase [Clostridium difficile R20291]
MKKINLKIEGKDKEYSLEENSPGIRLGDIAKEFCDEHKGYITLAVVDNKLKELNCRVKKDCEINFLDTTN
EDGERVYFRVMSFIFVMACREIFWDSRVTIEHSLSDGLYCEVHIDRKLKEADVENIKNKMKEIVNNDYVI
EKIEVTRNEAISIFENNEMYEKAELLKYKEYDSAKVYKCRNYIDHFYGYMLPSTGYIKSFDIKLYNGGVI
ILGPSEEDKTLPMKFVPQPKLSSVYYEAEEWSRLMGIDKVVSLNKIIENNEYGDIIRTFEALHEKKLSQI
ADMIKDGNKRVILIAAPSSSGKTSFAHRLSIHLRVNNLNPISISLDDYFIDRKHTPLDEYGNYDFESIYA
IDLEKFNLDLKKLLAGEEIDDIRFNFKEGKREYTGKKIKIDSNQPIILEGIHGLNPILTSSIPDEDKFKI
YISALTQINLDDHNRIPTADLRMIRRIVRDYNFRGYSADNTILQWASVRRGEKKNIFPYQEEADAIFNSA
CVYELAVLKRFAKPLLEEIKEDNPAHIEATRLLKFLQYFVELDDTSDIPGISILREFIGGSKIVD
>gi|260685857|ref|YP_003216990.1| putative glutaminase [Clostridium difficile R20291]
MNTLDETLLKEIISSNKKYTNYGQVASYIPELKNARRNDLGICIIDSENNLYSAGNCSTKFTIQSISKPI
VLAMALMDNDWEDVFSNVGMEPSGDPFNSIMKLEINDTKKPCNPMINAGAIVTTSLINGSCLEEKEERML
SFFRKLAKNDNIGINYDVYKSEKMTGDRNRAMAYLLKSDGFIRGNVEDVLDLYFKQCSIEIDSVDLARIG
INLANYGVDIENGEHLMSEMVSRIVKTFMMTCGMYDASGEFAIKVGIPAKSGVGGGIMASVPGRMGIGVY
GPALDKKGNSVAGVKVLEELSNKLKLNIF
>gi|260685858|ref|YP_003216991.1| hypothetical protein CDR20291_0484 [Clostridium difficile R20291]
MKEVLVLRDLECIKAIAHPRRIDILKAFDKSPLSAKQLSQLLEEPHAKINYHIKMLYKVGILELVEEKIK
SGIVEKYYYPSAKNVVIGNRILNFSLDNGEEKEELYISKFENMSEVFYKAAEEDVLENENIVDYHDISLT
HDELVELSDTMKSKIDEILNKRQHNVEGSKYDIAMVIVPTLEEECPS
>gi|260685859|ref|YP_003216992.1| endonuclease IV [Clostridium difficile R20291]
MIKLGTHLSIAKGFANAAETAVYIGANTFQFFSRNPRGGNAKEFDEKDIIKFQEIRKENNFAPLLAHAPY
TMNLGGTKDDVYEFATRVIDEDIRRMDSLGIEYMCFHPGSHIGGGVDFGIDRIVKGLNNAIKGDENITIL
LETMSGKGTEIGFKFEQLKSIIDKIEHKEKIGVCLDTCHIFSAGYDIVNDLDGVLEEFDKVIGIERLKTV
HLNDSMMPFGDKKDRHAPIGEGKIGLKALIDFMEHPSLKHLPFFLETPFDDEGHKRELKMIKEILSSK
>gi|260685860|ref|YP_003216993.1| putative aldo/keto reductase [Clostridium difficile R20291]
MRNLGNTNMKIKRVGFGGIPIQRITQDDTNLVINELEKQGINFIDSARGYTISEEAIGIAIEGKRNKFFL
ATKSMSRDYDSMKRDVEISLNNFKTDFIDLYQFHNVKEEEYDNLFKDKMAYSALLEAKEQGKIKHIGITS
HNLNTIEKAIEDGKFDTIQFPYNIVEGQADEVFKKAHEKGIGIIVMKPLAGGALDNATLAIKYILSKDYI
DVVIPGMESVEQVRQNVAVLENLVLDEKDNKEIEEIRNSLGKKFCRRCEYCMPCAVGINIPLSFLCEGYY
TRYGLKEWAKEKYEVMDVKPTECIDCGLCESRCPYELPIREMLKTVVEKLG
>gi|260685861|ref|YP_003216994.1| putative endonuclease [Clostridium difficile R20291]
MVKNLIKITIPGRPISKSNFKLHNINGQAWMPSKGKYSKYLAYENMIAGFINQQYQGETVEENLITVLKL
FFPNKRMGDLHNYPKSICDGIEKSGIIKNDKQLKPVFLFDFIDKDNPRVEIELYPVSKYDISYNIFEK
>gi|260685862|ref|YP_003216995.1| putative iron-sulfur cluster protein [Clostridium difficile R20291]
MDNKELKAFCNLIGLNCVGVAGVDKYDNLEKILKDRQQKGYLTGMEEPIIENRINPRHIMKDANSIIVCA
FPYHINRQEKNKNSNLSKYCHGKDYHIVVKDFLQQICDYISKTVTDFKYKLFVDNGPLVDRYLAYLSGIG
YFGINNNIITDEYGSYVFIGYIVNNYKFEEDKPLEKSCFKCGKCVKYCPGNAILGNYDMNPKKCLSYITQ
KKGDLSEKEKVVLKNGKKVFGCDICQEVCPHNVEMPTTHILEFKENIIDYLDYDEIQNISNKEFKRRYGD
RAFSWRGRNIIKRNMEIILDKYDD
>gi|260685863|ref|YP_003216996.1| putative ATP-binding protein [Clostridium difficile R20291]
MKYNNTSEINPLDYILGQERAVEAMELGLKINNPAYNIYIAGEPGTGKSTYALKVLNEYASKKNTHKDWC
YIYNFENPREPIIVELEKGFGRELKKDMEKLIESLLEDFKNAFESENFEIEKNRLLDEYEIEKDMLLKQI
KKYGEEKGFKLKQSKMGIVFIPLKEEEDESDKSDEEFYKAKRELENMAIQVVYKIRNLEEIAEKAVLELE
EEIAKLVVEPHIKRLCEKYENYDKIQTYLENIKKDIIEYMYLFYLDEEELKDKYDKEHFIKYKINLFVDN
ESSKNKESAPVVVEINPSPANLFGKAEYDYANGNIKTDFTKLLSGAFHRANGGYLVLYADQLLKYTMSWE
ILKKTLQTKKVILETQTAIKPENMPLDVKLVLIGSHYIYDILYRYDEDFEKYFKVFVDFDSEMDKNEDNE
EGIARFIAYQCDKNNLRHFTKSAVEEVIKFSTRLSGDLEKLSTKFNKIMEVVIEGSAYAEFRNSEYTEQC
DVKKAISEKRKRINRVETHMDESIENGFTLIETEGRKVGVINGLSVLSTGEYSFGRASRITATTSPGSKG
IVNIEREVNMSGSIHNKGVLILGGYLSENFAQDLLLSLNAYVCFEQNYGGIDGDSASSAELYVLLSSLSG
VSIKQNIAVTGSINQKGDIQVVGGISEKIEGFYSICKTKGLNGEQGVIIPRKNQRNLVLSDEVNDAVRDG
KFKIYTVERVEEAIEILTDVKFEEIKKLVKEKLISFSKIQTVSKE
>gi|260685864|ref|YP_003216997.1| endonuclease iii [Clostridium difficile R20291]
MEKLYPDAKCELNYGTAFELLIATILSAQCTDVRVNKVTSELFKKYNTARDFANLSIEEISKEIKSCGLY
KSKSQKIKDTSEQLCELYDGEVPDSLEKLIKLPGVGRKTAGVVLSNAFNHPAIAVDTHVFRVSNRIGIVD
EPNPQKTEFALMEAIPKERWSHSHHVLIFHGRRMCKARNPECASCPIKEDCNYYKELNETK
>gi|260685865|ref|YP_003216998.1| putative RNA methylase [Clostridium difficile R20291]
MSLNIVLVEPEIPQNTGNIIRTCAATGSTLHLVKPLGFSLDDKHLKRCGLDYWDIADIQYYDSFEELQEK
YPNSKYFFSTTKAKQSHSDVKYEENCFIVFGKETKGLPEPLLKANMDTCIRVPMLDVEKARSLNLSNSVA
IVVYEALRQIGYPNMR
>gi|260685866|ref|YP_003216999.1| hypothetical protein CDR20291_0492 [Clostridium difficile R20291]
MKNLKIICDSLSDVPKDLLDKYDIDIVSLTVILEEREYKDRIDISGDEFYKRLREENVYPKTSQATYAQF
KEIFEKYTNEDREILYIAGSATATGTYQSAVMAKNDVDGKIYTYDSNLLCMGTGLLVIKAGELASEGKSV
DEILPVLDELKEKAFVIFSVDTLEYLQKGGRISSTKAAIGSILNIKPILEIRDGLVSQISQVRGKKNVIS
KMMELIKSNCGDDLSDQIVYIGYSDDFKEKEQLSKVMQDELRPKEIRFFQIGVCIGAHAGPGVTGIICLK
NK
>gi|260685867|ref|YP_003217000.1| putative outer membrane lipoprotein [Clostridium difficile R20291]
MRFKRILILMLTVAMIAGMLVGCANNPSNNPSSSKDNKSDISDKSNSKKSVSMILDIEGTNNEAMNNAAL
LALNNAQKKLNIDTNKVESDDSSTFSNSIDILCNDNYDLIIAVGARFAKPLEMVAKKYPKQQFAIIDYEY
DKQPSNITSISYEDNKSGYLAGLIAGKMTESDKVGFIGGIKSSSRDKFESGFREGVKFSNSSIKDISVEY
ADVFKDSKSVESIAKKMMDNGVDIIFSTTEDDSKAVIDAVRAKNKKVIATNKDQHELAPENVISSIVKDF
ENPTYNLIQSFVKGNYKGGKVIENTVKSGSTGLAQNSSQNIPPDVLEYVNKNNK
>gi|260685868|ref|YP_003217001.1| putative outer membrane lipoprotein [Clostridium difficile R20291]
MNFVKIKRILMACFVVVFTIFILAICNFDFGFDKVNKNNSNIDSAKSKQSESKSVPTSAEKDKLNSKSKN
EEDDTEDDSYVRKTIGVLLDTENLNNESYNNNVLSALKRADEDFDVRIKLEKPKTSKSFKESIEKLHKYE
PDLIIAVGARFAEPIKEAATKYPKQQFAIVDYTYKVQPANVISVSFQDNVTGYLAGLIAGKMTDTGKVGF
IGGVEGSSRDKYESGFRKGLKTSNKDAELLVKYSNIFENPESARTIAKEMRDSDRDVVFSATEDDSKRAI
QVARENGGKVIAINKDQYDMAPDNVISSIIKDVEQPVYELIKNVAKDGFKGSKVMEFKIKDGELGLTSKS
SRNIPPDVLEYIKKEYNKVKDTY
>gi|260685869|ref|YP_003217002.1| hypothetical protein CDR20291_0495 [Clostridium difficile R20291]
MEFTREPFILDDDLCLALVDKRISYLMENELKLRNIEIIKTIECKELYESIKYHPDICICNLGKGDIIVA
PNVYNQYKELLSRYKFNIIKGEANLLNRYPYDIPYNIAIVGDYAIHNFKYTDKAILDYIENNKLKKINIE
QGYSKCSICIVDRTSIITSDKGIWKSMKNTEIECLLIEKGHINLFEMNYGFIGGCTGLISKDKLAFCGDV
KKHPDYERIKSFVESKNKEIVTLSCENLLDIGSIVPLMTRKER
>gi|260685870|ref|YP_003217003.1| hypothetical protein CDR20291_0496 [Clostridium difficile R20291]
MKFLRNNNVNDRLIYTNDIVEVVIDSAKQEVLNKKILNGTKAEQRALNIDEISTEITSMIISIMKEKLLK
EYILKCYGRTYPEDKNNIYIYSLNIFAKKEIFMRETVFTRVRNYIEENDFINVEGFIRFRMREFMKYISA
IGDIAVEEYLIKKDQDEFIRVLKYFIDTQEEKIDLLKVHIMEDNTFVLYDKNGNKIDSIDDEEIINMVIR
ENLNYEDFLISTLLTLCPKKIEILDLLNNNCSKEIIDTVEAIFENKVSIIMEN
>gi|260685871|ref|YP_003217004.1| putative membrane protin [Clostridium difficile R20291]
MDNLIRILILAVIGGFIGYVTNVVAIRLIFRPIEPIKIPILNIEIVGLIPKRRAEIAANVGEIIQEEFLS
MDEILANIITDEDKEEVVRYIKARVKIIIHEKVSFIPSGIKNMIQDYLGEIIESEVKQSIDELSKNIINK
ANERIDIQKMVEDKINELDLYELEEIIIRIAKKELKHIEFLGLVLGFLIGIAQGLITMFI
>gi|260685872|ref|YP_003217005.1| threonyl-tRNA synthetase [Clostridium difficile R20291]
MEPRINIVPNIFGAIFYYKKSKNYFNKEEKTMIKVALKDGSIKEFENAISVMDVAKSISEGLARNVVAAS
VNGEVVGLDHIIDTDCDLNLFKFEDKEGKEVFRHTSAHILAQAIKRLYPEAKLAIGPSIENGFYYDIDLD
HRLVPEDLEKIEAEMKKIAKEDLKIERFELPRNEALELMKEQGEDYKVELISDLPESEIISFYKQGDFTD
LCRGPHLPSTKKVKAVKLQSVAGAYWRGDENNKMLQRIYGTSFEKNKDLEEYLHLLEEAKKRDHRKLGKE
LGLFMIPEEGPGFPMFLPKGMELKNELLKFWREIHRKAGYIEIESPIILNRKLWETSGHWYHYKENMYTV
KIDDEDYAIKPMNCPGGLIYYNSQLHSYRDFPMRVAELGRVHRHELSGALQGLMRVRAFTQDDSHIFMLP
EQIKDEIKGVANLIDGIYKTFGFEYNLELSTRPENSMGSDEEWEAAENGLREALEELGLPYTINEGDGAF
YGPKIDFHLKDCLGRTWQCGTIQLDMQLPRQFDNTYIGQDGEKHRPVMIHRVAFGSIERFIGILIEHYAG
KFPVWLSPTQVKILPISDKFMDYANEVKKELFDKGIRVELDDRAEKIGFKIREAQLEKVPYMLIVGEKEV
ADNNVSVRSRDKGEIGSIKLDEFIASISKEIESRESIIQD
>gi|260685873|ref|YP_003217006.1| transposase-like protein b [Clostridium difficile R20291]
MVVVEKAYKFRMYPNKKQQELINKTFGCCRFVYNKYLAKRIEVYKNAKETFTYKQCSSDLTNLKKELKWL
KEPDKFSLQNALRDLDNAYKKFFKEKAGFPKFKSKKINRFSYKTNFTNGNIMYCGQHIKLPKLGMVKIRD
KQVPKGRILNATISKEPSGRYYVSLCCTDVDIEAFENTNNHIGLDLGIKEFCISSCGDFIENPKYLKKSL
NKLAKLQRELSRKTIGSLNRNKARLKVARLQEHIANQRNDFLQKLSTKLIKENDIICIEDLQVKNMIRNR
KLSRLISDVSWSEFIRQLEYKANWYGRQIVKVGKFFASSQICNKCGYKNEEVKNLNIREWICPSCNETHD
RDINASINILKEGLRLITIQNK
>gi|260685874|ref|YP_003217007.1| hypothetical protein CDR20291_0501 [Clostridium difficile R20291]
MNKKLIKAKIFIWSILAISLSIVFISLLIGTIISHSFNFPFNTLNPKYNYDNYIVAKNESFSDKINDINV
DWISGEVRIKRSDSNKIKLIQKIPSNFSKKKLAKIMVDGNSLSIYDNSTKKFFIGINLPKPTILELYLPN
KLYDKITLYTTSADIYSTYIRSNTVEANTISGAIGLSGNINKINLDTTSGHIDITKLNSKNATLKSTSGE
IQLSGKIDVLNLETTNGNINLKDIYNKNLTCSSVSGKMNLSGVFSDIKAESTSSNIKINSSKMLSSLYCE
TTSANVDLSIPDNPGFTLNFDKVSGVLDSDFELNRHSDLYTYKNGITNLYLSTTNGNLTIIKNNH
>gi|260685875|ref|YP_003217008.1| hypothetical protein CDR20291_0502 [Clostridium difficile R20291]
MLDKIRTYIDSSFTGVNETKKVKELKDELFENLKEKYNDQIQDGKTEQEAYNSVISGIGDLSELIESVKE
PYSLPSELIEEKKKRALRASIAVALFIISPFLFVVSVVSFGIEPTIAILLMLILIALGVGLLVYNQMTRT
NYALYNDNLSNKFKEFEDFEENYNHINPVYKSFMNAYWIIVVSIYLITSILFNIWSFSWILFIIGAAGVN
IVKGIIQLKGYKEEDKYE
>gi|260685876|ref|YP_003217009.1| two-component sensor histidine kinase [Clostridium difficile R20291]
MIKSSLFWNIFIAISFMIEWFLCKKMLDYTSEKRISNKKINFCMVGIIVFADIIYFFDVPPNIRVIISMI
ITIAFYKISYDVGFIKSVLISLIYWMLLIATDALSISLTVWLNSINDMSSMGTGDIYRIESIILGKILLI
VSLFLYRALKIKLNIEINKRTLFYIVIPIVANIASFFVIFEYIFNPGSGSLIHNFQFVMISVVLLISSIT
LVLIAKKLQQYNTLVVENNMIKNTLKYENEYYEDIEKKYLKTRLLSHDMKNHILCINAMIKKGIDVTSYL
NNLQVEIQSNDLLFNTGNFILDAILSEKKEVCDKNDIELKIGINFSCCEAVELVDICHIFSNILDNAIEA
CNKIDSGNRVICVKGDVMQNFYLIRVENTKMNKIITKNGDILTDKKGSLHGLGIKSVKNSVNKYGGNVVI
EYDDKKFVVKIAIPLRNVKKAVNHVI
>gi|260685877|ref|YP_003217010.1| hypothetical protein CDR20291_0504 [Clostridium difficile R20291]
MENKLYKNSKYSARGVIKMSYMPTLEQAWEILRKYNKEEFHIRHAQIVSGVMRYYAKEYDPERVDFWEIV
GLLHDLDFEMYPDEHCVKQRELMTELDLDKSIIDSTISHGYGLTGSDVKPEQFMEKVLFAVDELTGLIGA
VAIMRPSKSVSDLELKSVKKKFKDKSFAAGCSRDVIRSGAEMLGWELDKLIQTTIEAMRSLIPEMAI
>gi|260685878|ref|YP_003217011.1| putative efflux protein [Clostridium difficile R20291]
MVKSSNTFNKNFNLMILGQIISLFGASILKFALSLYILDITGKAEIFATILAVSSIPIIVFSPIGGAIAD
IFNRRNLMVIFDFSSSLTVLILAVFLFNNNGSILLVGIIMTILSVISTMYQPTVQSSTPLLVDNEHLMNA
NGIVAGVASLTNIAGPVLGGVLYGVIGINAIIVISCVSFFLSAIMEIFIQIPFIKQEQNSNIIKTIFTDI
KDGIVHICKENRFILKILFLAIAINLFLSSMLIVGIPYIVKITMGASNFLYGLAEGAISFSSLVAAVSIG
IFSKHLKITNLHISFIICAVMFIPMAVSVYPFILNTGFPVPFLIFIVSSMLIFFTTTLISIYVITVTQLK
TPNELLGKVMSILFAGTAIAMPLGQVMYGKLFDLLSDRVYIIILGVGFITLLIAFVSKITLRNENL
>gi|260685879|ref|YP_003217012.1| TetR-family transcriptional regulator [Clostridium difficile R20291]
MAKSFTEIEKDNIRKRLISECEINWSKYGYKKTNIDELCSKSGIAKGSFYTFFDSKEKLFFEVLNGIQNR
LISSVDEILSNMPPKEGFAKSLKMLYRLYDKNPFLYSPNNPDFISLINKLPQDMFLQLESNNIQSFYDLI
KRHNLKLKIEKEKAFGVCNSLLSSLLVKENIEYNYIEVFDFMVDNLVEHILE
>gi|260685880|ref|YP_003217013.1| NADP-dependent glyceraldehyde-3-phosphate dehydrogenase [Clostridium difficile R20291]
MFNELKTKENVYKNLINGKWVESNSRKPIEIYSPIDNSLVGKVQSMTKHEVDEVIKNTKESIKVWAEMPV
YKRANIFHKAADLLLENIDEIANILVLEIAKDIKSARAEVERTADFLRYTADVGKNMEGEAISGDNFPGG
TRNKMSYVSRVPLGTVLAISPFNYPVNLSMSKIAPALIGGNAVVLKPATQGAISALHVVEIMRKAGIPDG
VLNTITGRGSEIGDYVVTHKGINFINFTGSTEVGQHISKISGMVPLLLELGGKDAAIVLEDADLDFAAKN
IVSGAYSYSGQRCTAVKRILVQESVADKLVGKIKPLVEKLTIGNPMDEVVITPLIDNKATDFVQGLVDDA
LHKGAKLITGNVRKNNLFYPTLLDNVNVDMKIAWEEPFGPVLPIIRVKDINQAIEIANQSEYGLQSSVFT
SDIDRAFYIADKLEVGTVQINNKTERGPDHFPFLGVKASGMGTQGVKYSIEAMTRPKAVVVNVREL
>gi|260685881|ref|YP_003217014.1| TetR-family transcriptional regulator [Clostridium difficile R20291]
MPKGIVLTPEQQAERREKIVAVALSLMAENGFQKTSMREIAVLANMGKSSLYDFFKTKDEIVVYAVEKEI
EKTIQQVHRIIDGEPSPQQCLRKIMLNHLRFPEQYRTVLMWLNTESDYLEEEYRKRLKDARYAYQDIIKS
VIDNGVTTGIFRKTDTALVTRLLINSMLSISYTSRPSDSSEKMLDETMNIFLHGIMNDGGE
>gi|260685882|ref|YP_003217015.1| putative PEP-utilising kinase [Clostridium difficile R20291]
MIMIYYVLPLEHKQATIEIVGGKGMSLSKLLTAGIPVPDGFHVTTASYQIFVETNHIQSRINKLLDGIDS
NNTNQLEDVSKKIGELFHNGEMPQEVSDAIKTAYAGLGNISVAVRSSATAEDLPDASFAGQQETYLNIQG
EDKVIDAVKRCWASLWTARAIAYRVKNNIKHEIVALAVVVQKLAFSDSSGIMFTLNPINGRRSEMIINAA
WGLGEAVVSSLVTPDTIVVDKDSERIISYEVANKEIMTVRTSEGTEETMVPERLRKKYALTRNQVMQLIQ
LGKKIEKYYQMPMDVEWALEKDKLYIVQARPITVLPPEWVLPEQDVVYTKGSLAEHLPNPVTPLFATLGL
EIVNRASELLWIDMFGKSAKKLLPKNGAYTVINGYVYLSAKSKPLLIAIKSLSPRSLRRTLMNSVARWET
ARKGYEDAIKQWEEKPLHTMNAHQIMDGIQTIFYAACIYFTRIQLTLPAASISETLFTKLFQGAVRRAGI
TDTSVFLLGFDTIALQSEKELWGLSEWVKQNNSINLYLQNSPAIKIAEDFMSSVMPVGVSQEVWIEWKNR
INKYFKEFGRTAYEFDFAYSTPQETLTPTFESVKTFVEGKGESPFLRQTTFEKRRKHAEEEILQHIGGLR
KKLFFKLLHWAQETSPMRENAIYLMGMGHPLIRCMFQEISERFIRGGAISHLDDIYWLTKSELEVLIEQL
DKNKSLSDMNGIIPVRKAELKKYMGYVSPSKLPEKNKKTISQAPQKQKDGKIVLTGIGTSTGVVTAPACV
LNSPADFESFQPGSVLVAVTTTPAWTPLFSSASAIVTDIGGPLSHSSIVAREYGIPAVMATHIATRTIKS
GQMITVDGLAGTVTFDE
>gi|260685883|ref|YP_003217016.1| putative signaling protein precursor [Clostridium difficile R20291]
MSHYHFSSKNFIKKYDKIAKKYDIPSHLIEIEITETIVFEDVKVFSEIINEIHKNDFKCSIDDFGSGYSS
INMLKGIYVDTLKLDRAFFQSEDLDSQRERNIIVSIIELAKKLKMTTVAERIETSFQKDFLQEINCDMLQ
GYVFSRPLQIKDFEKLMFQNSSN
>gi|260685884|ref|YP_003217017.1| hypothetical protein CDR20291_0511 [Clostridium difficile R20291]
MSLFVGGWSKFRAVEEEDLKVFNEAIGMLKGVDYEPLIVATQVVAGTNFKFICNATSVTNPPHDYLAEII
VFKPLPCDEHNATITSINIIK
>gi|260685885|ref|YP_003217018.1| hypothetical protein CDR20291_0512 [Clostridium difficile R20291]
MRLNVTKQNTIEVENSRKEDVYFVIVDNVFFERQGDVFNSITNNNLNNYDVKILPTDNVFLELKITSTKD
LEPVFIVVEDRQYNHGSIMFKPVLV
>gi|260685886|ref|YP_003217019.1| hypothetical protein CDR20291_0513 [Clostridium difficile R20291]
MPENNNQLLEEITLLLNEGKVAINKAENQNLILILGGTGCGKSTAINYLAGCVMMEVEDEDTGISYIDCL
DPVAEIGSGAVSQTLYPNIVNMRKPIEGMDAKLCDTAGFSDNRGVAHDISAAVSLGEVFKNSASICAVIV
LIKKMQNSVKQEPCDFSHGRFRPEADILDSRLTKVLDLFQQLNMCLHKDNFRGSITFFISKSFLGRTEKQ
IYNVIKRKYEQLCENLDSNIEEKAWLFEELLKDNGKNIHLCKPLESDEREGLLKQVLELDEVKDKTSAFQ
YPISADARLVLDTLIKEIQNNIVSSLEDYVKAYTEDFISIIGSITMIQEIAKYDEVVKVFKNWLESTTTL
TIERFINVLAKQSGLFLQDSCMELQNKIKGNLDIIDALSKYTEHGTGEILLPSVHMEFIIEKASKKIMEQ
NFIIIRKNLEKVLVSYEVQKQVFTLPNREKLMEVANKKDYVYSVSDFNSILTNVTVTQNEELEDSITRLS
AYGEEGNEIIREFIGKYILNPFIVKTININDKKGIEIRALIPNLVISSVLEYFKNRKVDDNVSTFMFFAK
DTIYMDDNLGMDFASEKNIILACNNLDVGSNVKINVSGKSGELVDSSMYGKNGEDGRDAGNIYLYIKEEI
RNYRLTLIANGGNGSKGIDGKNGETGDSGSNGADAGYTSSFHGQMFKGYFAKGTSGKKGDKGGAGGNAGR
GGNAGNKGNIYFISDSEEQKNRIINHCDITVKDGEAGPNGRPGSGGYGGSGGYHGYNTLSFSPSGIDKTV
YYTGYFTSWDYKLDSIIKYHIEFSGGSWNEGKTGPAREYAEYGDRGDDGGFNAPNTKLSTAVSKVEENLI
KEKYQGYCSEI
>gi|260685887|ref|YP_003217020.1| hypothetical protein CDR20291_0515 [Clostridium difficile R20291]
MANKLYSEIVNLLEEGRDELRKYDLKEKSILLFLGASGVGKSTCINYLKGCVMEEKTDEETGQIYITAKD
SAVEIGNGVYSKTLCPEVVDIANRNFSLCDCPGFFDNRGAEYMIAGAMLVRETISTSSKVKGMVVILDYQ
SLLDSRHTLLIETGKNLKDMLGDYAKYKENFFFLINKIPKTLIGNVTEEKIRNILEKAKEDLDSQEKDYD
GCKELVYLLNVALSDGVSIKLCNPLDRQPEKLLDEMKNLPETFEKTDLGLMLTASCKIEIQKAVDVTYKD
LEKLLVPYIESVKKGMEDSISILSSINSLKDKKTQLDKMYTDLCSRTNNMKELMEFVQELSYGDGVQKVN
ILEETRLLLELNSYCSETHIVGLSELLKSLLKNTLEDTLKDIKYWIAEEEYREEEAKKLEDAEYRIEKIQ
SCTYIKSYEKENVLSIYIPIPKVNLSDLTKIISGYQLNILSSIYMYGDCELKIDCNMEKEVFSGKNIVLL
TEKLCIPEGIYSINVSGKDAEKLVGEGSIYDGMNGRNGNNAGTSGDILLSFKEIEKRGELKLYVDGGRGG
NGQDGKRGDTGITGEAGENAKIGSKKESKEFAKVKGTKYYVVKAEKGKQGGTGGTGGNGGNAGLGSKSGQ
VYLLGKASLLKGAISKKDGNHGLAGKGGSGGAGGAGGLGGIRGIYEETIRYIGTSAPIDDSDRNYYYFDR
YVFNHASNENQVADDGEKLNALYEKHKDWTISKREDSGLVGAEGKDGRSGDALKEKELLKQEYSLSIDTF
FYEFFERFGFSGIKGYRNLRLLCAVGILEADILELSHIYEIFHAVEKIEMQLNREILQKYYSFEKKNKAV
LSLDDMNIKKEFYKEAKEIYEYLINKLMQSDRIESFIGEKKNFSEWSMILFALEQKTAFYVQMIEESEIG
GNRVTDIRSLTDYLDKTLRELEQGKKDELKEGYFNTYKESILTQIESGNQQIEVLKDELENKMLSVNAKM
NLLIQEIIKMKEEEQEDIEELKKKQAKLEEQMKTQLILSGIQSALSLLTAFSGVGQACLGAFDSAKSLKE
NLSAKEEEYQWTNRMVDFSDFKLDSDGMRFVLGEQLSEDRKNALDKMTYNLAGVDEERRTKFDQIKEIIV
KSIDDDNYAEKADDIQRAKEGLSESEYKEIYTKIQKKEIGMLEANYNNKQQKDKLAALEKSKQAIERQQK
TSKIKNALSIGSSACSLINTAISGVNNCLNVKSSFESKIEVVKEAIKDKENNIKKLDELNTQMVEFKDKT
LKESVIPFVEKFDSTVKNQDIFENEISKLKMKEVLTELSTKFGSLKMENSEEISIIFKKVQDMMETQIII
TDKIDKKKDNLAMGELIYQMSGSGNQMNEYQKKLIHQIELNQVRYLCQVEAAAFQLWTFPFGSNIVNILN
RCHVGITEDENEVINQAKEQNRQIREFLDQDAYQWQKTDNHILKVALTGSLDGKSRVGFENTYSLYDCNE
EEVKKLLTGDEISFEVPLNKNFDAIKYVTMYANIPNLRRNILEDSLKVKVHIHLYDSGYFSLYDDKKDVY
YQYVFPQNYIDITHGLDVKYNDSDSINSIWSSVEDKGIEKFKNAGLNSGRSPYSMAKISLKAHFNKKLSY
DSLTNEQKKKLESYFDKPSKYAWSESIDILKSLGYIDLKGILSKSWYEIKKDIDSDGEIMKHFSILQVDL
LERIIYEQTSILKENIPNLTIELVGCGIYVESEFNYLKQNDLKCYEERLVENTIIC
>gi|260685888|ref|YP_003217021.1| putative cation transporting ATPase [Clostridium difficile R20291]
MNFYIKHEIRGRIRFDLQLGKLNNKQSDTLLYYLTSINGITKAKVYDRTGDAVIYYTGEREYIIREITKF
SFNNSKIENLVPEHTSRELNNYYRDKLANKLLVKSISKIFFPKSLRFFLIGLHSIKYFKKGLSSLLNKKI
EISVLDATAIGISIFRKDINTAGSVMFLLGIGELLEEWTRKKSIDDLAQSMSLNIEKVWLKKDATEILVP
ISEIKEGDLVSVTMGNMIPLDGVIVSGEAMVNQASLTGESLAVNKKEGSYIYAGTGIEQGNIVMCVKEKA
GTTRFQKIVTMIEESEKLKSSVESKFEHLADTLVPYSFLGSILTYAITRNPIKSLSILMVDFSCALKLSI
PISVLSAMRECNNHSIAVKGGKFLEGVACADTIVFDKTGTLTKAQPTVSDIITFQNYNKKDMLRLAACLE
EHFPHSIANAVVYEAEKQGLSHKEMHTEVEYIIAHGISTKVDDKKVVIGSKHFVFEDEKCTIPDGEEDKY
NNLSDEYSHLFMAISGKLSAVICINDPLRKEAKYVISNLREYGIKKIVMMTGDSEKTAKSIASKVGVDEY
YSEVLPEDKANFVKSEKLKGRKVIMIGDGINDSPAISESDVGIAMSEGAEIAREISDITISADNLNNLIV
LKQISNKLMKRVDLSSKFIIGFNLGLILLGVSGFVRPSTSAFLHNASTVGISLNSMTNLLENTNTYNYY
>gi|260685889|ref|YP_003217022.1| hypothetical protein CDR20291_0517 [Clostridium difficile R20291]
MNILKMKKTGIFLGGVLFGTVGVKILSSDCVKKTCTRATAGALKVKDSVLETTTKIQENVEDILAEAKEI
NEQEDLSTSKVNVVQDTLKCEQEVLKTETIKTVEDTNSNNIKCEEIKDNVIEEKNNTCTTE
>gi|260685890|ref|YP_003217023.1| hypothetical protein CDR20291_0518 [Clostridium difficile R20291]
MYERMLDKSNKPCLSQIIEYIGKDGYARLCKLETYLETQYNLSRELRFPFGNNYGWGYKYSHKSFHLFYA
FFEKGAFTVLIQIGDKQVPAVEKTLVSLTPKAKELWVTRYTCGNNGGWIKYRILEDADLLDIIQYIRAKK
SPPKQN
>gi|260685891|ref|YP_003217024.1| hypothetical protein CDR20291_0519 [Clostridium difficile R20291]
MDKRYLESDVFEAFQERLSYLFNEFDYIYVSFSGGKDSGLLLNLVLDYKRKNNISSKIGVFHQDFEAQYS
LTTEYVEKVFEENIEDIEPYWVCLPMATRTAVGNYEMYWYPWDDEKEELWVREMPVKEYIINQKNNPFTY
YKYKMRQESLAKQFGRWIRDIHEGAKVVCLLGTRAAESLQRYCSIVNKQHGYKGKCWITKEFKNVWTASP
IYDWEIEDIWLAHYKFDYDYNKIYDLFYKAGVAPRKMRVASPFNDSAKESLNLYRILDPDVWVKLVARVQ
GVNFTSIYGKTKAMGYRSVKLPYGHTWKSFTYFLLDTLPENIRNSYIKKFSTSIEFWQNTGGGLSEIVIR
ELLRKGYKIELNGVSNHTKDKKSRVIFLDDIPDDTDDIKFTKDIPSWKRMCYCILKNDHMCRFMGFGPTK
EQRIRTEYIKKKYEKIH
>gi|260685892|ref|YP_003217025.1| hypothetical protein CDR20291_0520 [Clostridium difficile R20291]
MEYKSPVYGIIAVPIEKIESNDYNPNAVAPPEMQLLYKSIKEDGYTMPIVCYYNEEKDKYIIVDGFHRYR
VMLENKDIYDRENGLLPVSVIDKSLDERMASTIRHNRARGSHNVDLMSKIITELCEIGKSDEWISKHLGM
EVDEILRLKQITGLAYLFKDKEFGNAWIPFGSDIEEEN
>gi|260685893|ref|YP_003217026.1| hypothetical protein CDR20291_0521 [Clostridium difficile R20291]
MGYLKEDKQDYCCEFARPYINRQIYDDTYNPKTALKRGTLFPELDLIESNNYNDWLYSNPKNRVRAKKGG
NMY
>gi|260685894|ref|YP_003217027.1| putative spore-coat protein [Clostridium difficile R20291]
MSLNRRELLERISEYQFACIELNLYLDNNPRDKKALDLYNRYCDKFTQAVCDYESKYGALTNFGYESSEY
PWSWISEPWPWDKSFYK
>gi|260685895|ref|YP_003217028.1| putative spore-coat protein [Clostridium difficile R20291]
MWIYQKTLEHPVNIRQADPRMAKYIMTQLGGPNGELAAATRYLQQRYTMPTGKSRALLTDIGTEEMAHVE
IISSVLYQLIGSCTPEELKAAGLGSNYANFGHGLQPVDSNGVNFTTSYINVFGDSVTDLHEDMAAEQKAL
ATYYQLINLTDDPDLKDILRFLGEREVVHYQRFGEALMDVYEFTECKHQF
>gi|260685896|ref|YP_003217029.1| methylated-DNA--protein-cysteine methyltransferase 1 [Clostridium difficile R20291]
MQYISYYHSPIGNILLASDNVGLTGLWFENQKYYAYNLDQEHQEKELPIFEQTKKWLDIYFSGEEPNFTP
SLHMVGTPFQTTVWKILQQIPYGKTITYGEIAHKVAQQKGISKMSAQAIGGAVGHNGISIIVPCHRVVGT
NGSLTGYAGGIDRKIKLLSLEKVSVQHYFIPKKGSAL
>gi|260685897|ref|YP_003217030.1| putative plasmid-related protein [Clostridium difficile R20291]
MEPDIKDLKTGQVETSSRLDTIQSDVTEIKSDVKINRNTLDTVIKHTSSLVEDTSDIKNDLNNIEIVTSK
NWNDIAKLKSVK
>gi|260685898|ref|YP_003217031.1| hypothetical protein CDR20291_0526 [Clostridium difficile R20291]
MPSILLILPCISLIVPSISLILLCISLIVPSIPLILPCISLIVPSIPLILPCISLIVPCISLIVPCI
>gi|260685899|ref|YP_003217032.1| hypothetical protein CDR20291_0527 [Clostridium difficile R20291]
MKMPKESIDTIMFAPCGMNCMVCYKHCYHKKPCAGCLNSDTGKPEHCRKCKIKDCVCQKGLFYCFECFNF
PCKLIKNLEKSYNKRYQASLMENSKFVQQYGLEKFMQKQKERYTCSKCGGIISIHDRECSECQEKVK
>gi|260685900|ref|YP_003217033.1| hypothetical protein CDR20291_0528 [Clostridium difficile R20291]
MVKLLEHQMIWDKSAKDVIILLKSIWDKTAIDIQHIGSTSIPSISAKPIIDIVVGVASLEEAKLYLERLE
QCGIVFRGQDVPKQLLFAMGDFEKNTRTHHIHVVEWNSVAWNNYINFRDYLNTFTDKAKLYDSHKQKLAL
QFEDNRKIYTQRKQELINILLE
>gi|260685901|ref|YP_003217034.1| transposase-like protein b [Clostridium difficile R20291]
MEKAYKFRMYPNKKQQELINKTFGCCRFVYNKYLAKRIEVYKNDKETFTYKQCSSDLTNLKKELKWLKEP
DKFSLQNALKDLDNAYKKFFKEKAGFPKFKSKKINRFSYKTNFTNGNIVYCGQHIKLPKLGMVKIRDKQV
PQGRILNATISKEPSGRYYVSLCCTDVDIEAFENTNNQIGLDLGIKEFCISSCGEFIENPKYLKKSLNKL
AKLQRELSRKTIGSLNRNKARLKAARLQEHIANQRNDFLQKLSTKLIKENDIICIEDLQVKNMIKNRKLS
RSISDVSWSEFIRQLEYKANWYGRQIVKVGKFFASSQICNKCGYKNEEVKNLNIREWICPSCNETHDRDI
NASINILKEGLRLITIQNK
>gi|260685902|ref|YP_003217035.1| putative membrane-associated metalloprotease precursor [Clostridium difficile R20291]
MVSSFLNDIFRTILVSCIFIVILLVFRITLFKTFSKKFNYYIWLIVIIKLSLPFMNYTFIFNESKYNGNI
NKISLGNFNSISIVYSTVLVSVWIAITIFYLVYTLLKYIKLKNMINDLSYDVEDDKIKNLYENLLKELKI
NKKIRLKYSYEVESPVFFNSCVILPPCDYTLKELNWIFRHELMHFKSKDLYIKYLVIFLKCVYWFNPFVY
IMEKFIDLDCEFYCDERVLKNCTIEEKQDYALTIISAMRKGSNSSNKFVAGLHKESDIKKRVFSMFNEKY
RNGILIAVILCLLSSITYFEIDLITTKSIFYPLSKQTPIENRTNSKPTYQINVYIDN
>gi|260685903|ref|YP_003217036.1| hypothetical protein CDR20291_0532 [Clostridium difficile R20291]
MKKKLEDMTLEELWNLFPIFLTTHKECWKNWFKEEQYRLTGILPMQKIVRISHIGSTSVSTIYAKSIVDI
LIEIIPDYNMKDIKDLIESNGYICMSESSSRLSLNKGYTVDGFEERVFHLHIRYVGDNDELFFRDYLIDH
PDVAKEYEKLKLDLWKKYEHNRDAYTDSKLDFVREFTEKAKVLYSNRYN
>gi|260685904|ref|YP_003217037.1| two-component sensor histidine kinase [Clostridium difficile R20291]
MDTYSLISTSINFILILINIFIAFFLYKLTSYFIDFRNHWIFKIILILGYSIISQMIIWLSDPVNILFTL
FGYFILLIICSKSKLIPIISVVMILYPIIIGLNFLFINNPIYEELIHSKEYILILSIVQIISALIKLLFW
FLIHIFLKNRLVNIKQYLSNKIWIFIDMVCISSFLSILIAIILPPTNLIPMGSNKNIILGNLPYGTYLII
LSAILANIGVILLLQPLIENVKMKIEKQANHLKEKYYNLLENQQIQIRKMRHDMNNHFQMIESYLEIEDI
AGAKKYFNQLKIGIGTLSGKQFCKNQALNSILNLRHTSLEENGVDVHFNIDIDNHLGIEPIDLCTIFSNS
LDNAIEASLKIPDLSNRKVVLKARCEKEYFSYLLTNNKVNPINRKQELFISDKKDSNSHGYGIENIREIV
NKYNGKLDISYTENEFSLFLYIRLF
>gi|260685905|ref|YP_003217038.1| two-component response regulator [Clostridium difficile R20291]
MKGDKKLTSICICDDEKQQRNMLNKIITREMDLWGYPYQIKEYSNGESLVYNLEHENYYIDIIFLDIELE
KSNGVDIAKTIRKHSKDTIIIFVTGFSDYVFHGYDVGALNYILKPYKTEKICKVLKEALKKLEQWKENFI
TVHIGTNLCKINTKDILYFKSELRKLTVVTFDKTLEYYGKLNDMETVLPSNFIRTHQRYIVNLNHVDSIT
QTYAKVQNEKIPISRKKYQEVVGKFTRYMLEP
>gi|260685906|ref|YP_003217039.1| putative ABC transporter, permease protein [Clostridium difficile R20291]
MTINKLYSKLRAYNWKNYTTLFFCIILSVVLVTSYALIYFSPTIQNILPTGGDSRKQATMIFSVAILGCA
VFTTYASSLFLKFKSKEIGIFMALGTDKKKLKKLLFSEILLISIVCCFLGLILSIPVSFGIWKIFQLVII
DTREMTYHFGTQGFIYGFIFSVFVTLCIFILSVKFINRTNIIDILNDQRISEPIQDVKDWYGILGIIFII
LGIFLGYIVPSLTINKLNYRLPSVWSFTYLLSLIGIYMIMTYIVVHAKRGKHPEKYYKNIISTSMMRFMG
RQTVKNMCVISFLIAGALFAVFYVPNMVAGIYDTLKNNPIDYTFTYNQRDKQVSKKDIEQLADKHNIKIQ
NYMEIPSIELIVDGVESIYHKDGTIERVYMKKSSYDMFFNSKDFSKLIDKPITIKNGEYLAVVNKGNENQ
DYKYTKFISSPVTEKEIPFRYAGKIIFNGSFFQNRSMNAYVLNDEDYKSFTKDLSIKNYNNSILFNVDKD
TYAFANDLKKEIIKRTSKEMGMFSGYDEYVKKRYESTGRKYFMDEEYPSGEGHLKLDPNNNQLYLNWKYY
PNFKILQSQDMIKNMAVFLMLFIYVAIICFTAVGIIAYTRGVTIAINHKQVFMDLNRLGANNDYIKFCIR
NQLKKVFSYPLIAGSFLIYLFNFMIMLNNDGRIVNSEVNALLINLGFIGICGVYMYLIYLLTYKKFKKII
GIL
>gi|260685907|ref|YP_003217040.1| ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MKVRMIYMLKVNQLCKSYKTGNKTYPVLKNISFEINKGEFVAIMGSSGSGKTTLLNCISCFIPIDNGEII
LGNNNIRNLKEKELSEVRNQQLGFVFQDFMLFDGLSVFENICVPQIIKGSQVLQMENRAINLCELFGIEH
IRKKYPAEISGGEKQRTAVARALMNNPDLILADEPTGNLDSKSCRTVIESFLKAKQELDATILMVTHDSF
AASFCDRVIVLKDGIIYKEVVKSNSRHKFLDELLEVLKEMGGAQDDN
>gi|260685908|ref|YP_003217041.1| hypothetical protein CDR20291_0537 [Clostridium difficile R20291]
MFFTFIGVISAILLLCTIICGLWIKLNNRNNDSNSHFTFSILSIAFSLLIVVAFLVRN
>gi|260685909|ref|YP_003217042.1| TetR-family transcriptional regulator [Clostridium difficile R20291]
MIVSKRVLNMFNFFMEKLLRGKIMKADSTKEQLINATIQLLSSHRDVSSITAREIVAKANVNLAMINYYF
KSKEELINISIKKFLKRHMDEYKATHDTKNLAPKQQLREILIAFFDFIGEHSQFIKISVPYILIQEEIVY
PFEILPLIKAHYENQNNKKTEAEYRTIAYQITSFIQLLFLRSNAFFKYSGIDILNVEQRNGLIDFQLDLL
LVDITK
>gi|260685910|ref|YP_003217043.1| MerR-family transcriptional regulator [Clostridium difficile R20291]
MFKIGEVSKLTQISIRMLRYYDELGILKPAEIDKYTGHRLYSVEQISILQRIVLLRDSKFSVAEIANIVH
NWNDEFVIKELNRKKNEIQKEIKHEQQRINKIDKFIEAINCDKDEIHYNVVFKKIPSYKIISLREVVPDY
QSEGILWEKLSKFIKEEHIEVSRQPNNNIAFYHDEEVKDNGVDIEVGMVVKKIGKNKSGFIYRETEEIDM
MACTMVYGPYENIAGAYESFCYWLDKNSDYQISGINRQIGHKGEHNEINPENYLTEIQIPLIKV
>gi|260685911|ref|YP_003217044.1| hypothetical protein CDR20291_0540 [Clostridium difficile R20291]
MQLYNTPFNTNKHLIYFFTSTLVLNWIFSLTPALLGITNTILGEIIFYLAYTSPAIVGLFFISTIYPQSA
KQDFIYRYLSFKEIRIKWILLTILFFALTFITSLIIGNYFNVKTSDIDWIHIAVFRPSKIAYMLLASFIL
SILSQEAGWRGYAIDKLLVRFGFIGSSIILGLVCGIWYLGSYFTPNQIPYNLAQYSLFDAFLFIPNIVLL
NFIINFVYINTSRSILSAGLVHMMYYFFNIQLLLHYPIKLCVIAQYVQIIFGLIFLVYMISSNKFKQKVN
SEIEQIKSDDFEFELDW
>gi|260685912|ref|YP_003217045.1| putative transcriptional regulator [Clostridium difficile R20291]
MKIHVEQGINCDDIEITIKCSALDNNIEKIISLLSTPLLDIKGKKSGEIYKLNVCDILYFETVGNKTFAY
YEDDVFEIDLKIYKLSKLLANTSFSRISKSMILNMDYIKSIKVISHNRMQATLKNNEKVIINRRYIKNIK
EKLNI
>gi|260685913|ref|YP_003217046.1| hypothetical protein CDR20291_0542 [Clostridium difficile R20291]
MEIKKKLVMSFKNVKDKQVSFSIENPKDDLTEENIKSVMDLIVSKNIFSVGGFDLASVVEAKVVETNTTP
YDLVIE
>gi|260685914|ref|YP_003217047.1| hypothetical protein CDR20291_0543 [Clostridium difficile R20291]
MEVVSTKNLSSIKLKLDAGFDDKGKAVVKSKSFANVKAEALNEDVYAVAEAIASLQENPIVDILKLDSTS
LSK
>gi|260685915|ref|YP_003217048.1| hypothetical protein CDR20291_0544 [Clostridium difficile R20291]
MRNFIKVNTKINFKAKKFFIRFNKTNKYSLVNNVLNKNFVKSIKIS
>gi|260685916|ref|YP_003217049.1| putative phage-related regulatory protein [Clostridium difficile R20291]
MKIKVEDIPVQFHAMVEIIGIDKFIEVAKLYGGTNTYIPTYKGLFRYARNRDIVKQFNGVNHNELAIRYN
MCVSNIKRILNENNV
>gi|260685917|ref|YP_003217050.1| putative phage-related regulatory protein [Clostridium difficile R20291]
MGEIEMNKGFYKLNSVVLNFDIKNDVNKIRFNHYIMRKENIQRLQGTLPNGQFYMTVRRAATDLQLSIST
ISRLVKEFLDLGIIRLVSKGVKGNRSVYSYVSIEFNGSLFDDSKYMELDCVCNDEFIDNSGIEFDCDSKD
NSFNGDINVETVHCINEYFSDDDVEHNYNNFHNKDTIKDKAISNISTIKKYIDESFDTNKSENSNLQQES
INFNFNDTCNEIDKRTNNSIENNQNKRPMRLSDISVLSDKGMTNKKNYFNHNHGIQKRNKSATKKKESLN
KFNKKNIQQSIINMLNKKSGKNFKIDSPISIKLINERLKEGYVLEDFYKVIEVKVAKWKNTIMEMYIRPE
TLFSYKFESYVNENISMKSQSNVHPCKEGNSNDSSNYIHSDYTTYDGSVRERKKYENVRYWNPICEI
>gi|260685918|ref|YP_003217051.1| putative phage-related replicative helicase [Clostridium difficile R20291]
MGKSKDVEIEKSILGTILLDNKLSYKLDELNENMFMNDICLEIFKIMKELKKENIVIDVATVKSKIDRKS
LAIKTSDVTNLITWGQNFGLDGHIKILKENLARRSINQNCQNLLHSLNLGENIDTCIYKFESNIKEILDK
DTYENDDVNSIAGKVLDFLENKKDIGFKFGIKLLDTTIGGLFKGELTTIAAKSGVGKTALALQIMLNSFK
QGKKTLFISREMTSEQVFMRNICRVTGVSTRNMKSKEIDENDWKLIVNAIGDLSENNLIYINDKIDTISA
IRKRIRQVKPDLLIVDYVQLLTSQKSMDKREREVATFSRELKNMTLDFNIPVIQLSQLNDEMKDSRPYGD
RPMRDSKAIYHDSNNVVYIHQLKGSDYEEAVRDIGESEEAVRASEYRGIKMVDLIVAKCRDGQTRHKHFC
YFGDKLHFQELNY
>gi|260685919|ref|YP_003217052.1| putative phage positive regulator of late transcription [Clostridium difficile R20291]
MLELTKIIELLEEHKIEVSIPKELHKYSLLEYLELCQQSGGTYFYIKTLEGALKEARNELMIKLFNGKNY
MELARMFEMSVINVRHIVRKK
>gi|260685920|ref|YP_003217053.1| putative ferredoxin [Clostridium difficile R20291]
MSNKKKKYANILANECVACGSCIKACPRSAISVPCGISAKINRDLCVGCGICEKICPASVIEIITILKEE
EGKCHE
>gi|260685921|ref|YP_003217054.1| hypothetical protein CDR20291_0550 [Clostridium difficile R20291]
MNNKKHWYDYLWIFSSIYLVLGFVNIIFAWIGLICFFVPLAISIVKGNKAYCNKYCGRGQLFNLLGNKLK
LSRNRDIPKFIRSKWFRYGFLTFFMVMFANMLFSTYLVFEGSRNFKEVVTLLWTIKMPWQWAYHGTLVSP
WVVQFAFGFYSVMLTSTVLGLITMILFKPRSWCVYCPMGTMTQMICKAKSKSV
>gi|260685922|ref|YP_003217055.1| abc transporter, atp-binding/permease protein [Clostridium difficile R20291]
MKYLIEIAKKERLLVFIYLALGIGIELLNSFSANYYQSLIDRFNNSTINFHIIFIYGTVLVTLCLLRYID
EYPGRRLEHSFFLDLKLKALEKMSKIDYLEYQMLGTGKLIQKIENGANAGRNIFFNFLLAVVRKIIPSIL
FSMVFIYRIDKKVMFTILIGYFIVFIITNLLIKALYQIKEHILINEEKMNHFLVRGFVEMVVFRVNKRFE
YEICQSKFAKKEIIDSRVKMTLIHEAFFTIFSLIVTFIKMLIIVYSWKTKTISIGSIIALITLLDNAYTP
IAIFNVLYIQFKLDKAAYKRYTDILELNNDGQLLAGKEVNLMYGNIEFNEISFLYNNKREIFNKLSLSIK
SGEKVAIVGESGSGKSTLIKLLIGLLKPSEGTIFIDDYNLLEMNLNSYYNYVTYVSQDSPIFDGTLRENI
VFGKTIKSNDIIEVLEKVGLKNLYLKLEAGLDTKLGEKGTTLSGGEKQRLALARLWFSDAKIIILDEATS
ALDNITEEKVMLNVMEFLKDKTTIMIAHRFNSIKNVENIIVLKEGSIIGSGSFKKLLDGNLYFRELYYTM
S
>gi|260685923|ref|YP_003217056.1| putative transcriptional regulator [Clostridium difficile R20291]
MISQNEIDILTHSLPFWDKLTDLQKELLISSANTSDYKKGNPVHCGDSDCIGILIIKSGTIRTYILSDEG
REVTLFRLDDGDVCILSASCILKTITFDVYVDAETDCDIIQINSSVFAKLSTENIHAELFSYKLATERFS
DVMWAMQQILFMSFDKRLASFLIDEIAKNGSSTINMTHEQIAKYMGSAREVVSRMLKYFAREGIVSLSRG
GIKVLDKDKLRSLTL
>gi|260685924|ref|YP_003217057.1| putative drug/sodium antiporter [Clostridium difficile R20291]
MKESNKKIELLGSAPISKALLSMGLPTMIGMMITALYNLVDAYFVGGLGTSQMGAISVAFPLGQLVVGLG
LLFGNGAASYIARLLGHGDNEKAGKVVSTSIYSSIIVGTLVIIVIMIFLNPILKLLGATKSIMPYAISYA
SIYVVSSIFNIFNVTMTNIVTSEGAAKTTMCAMLLGALLNMILDPIFIYTFGLGVRGASIATAISQIAST
LVYVGYILSKKSIFSFRINECCFSKEIFSEILKIGIPTLIFQLLTSLAITLTNMEATKYGDSVIAGMGAV
TRITSLGSLVVFGFIKGFQPIAGYNFGSKNYDKLHIAIKTSILWTTIFCVVLGLILVLFPKSIISQFTSG
DILLIENGSKALRANGFSFMLFGFYTVYSTLFLALGKAKEGGFLGMCRQGVCFIPIILIIPVFYGLNGIL
YAQPIADLMAAIIAGFMSIRLHKELNLLKINGMH
>gi|260685925|ref|YP_003217058.1| hypothetical protein CDR20291_0554 [Clostridium difficile R20291]
MIFMATIDLIVLGIVKQQPKSAYDIQKAVEYRNISRWVKISTPSIYKKVIQLEQKGYIESKTVKNGKMPE
KAVYSLTELGETHFLDLMFDTSSKPINILLDFNAVIVNLNSLTPEKQKLCLNNIEENVQELKKTIEENII
IKTEVPETAKAVLEQQLVLAQALETWINSLKDNMGN
>gi|260685926|ref|YP_003217059.1| hypothetical protein CDR20291_0555 [Clostridium difficile R20291]
MPELLKNMYNRESLYEVAVAIQSVYNSFKVDEFIKSTMDETWNNLELKARCRKISMSLGMYLPEDYKEAL
SILEKSVTGFYFAFFFPDFVEVYGQDEINWDLSISALERNTEYWSSEFAVRAFIIKDEERMMAQMRKWSK
HKSEHVRRLASEGCRPQLPWGQAISKFKKDPTPVLPILEQLKTDTSTYVQKSVANNLNDISKTHPDLVIS
IAKDWYGKNKSTNWIVKHGCRTLLKKGNRDVLALFGYDDTTSINLQDFTLETTSISIGEDLTFSFNILAK
KATKTRLEYGIDYMKSNGKRNRKIFKISEVSLKENEKKSYMKKHSFADVSVRRHYPGIHSITIIINGVEK
GKLDFELGV
>gi|260685927|ref|YP_003217060.1| hypothetical protein CDR20291_0556 [Clostridium difficile R20291]
MDVYSFWNDTLAQDAVKIRKYFHEDAYINWHDTNEHFTLEEFIIANCEYPDKWNGKVERVLEFGNLVITV
THVYAINKPLSFHVVSFISLKDDKIISIDEYWGEDDDVPQWRLDKHIGKPIK
>gi|260685928|ref|YP_003217061.1| hypothetical protein CDR20291_0557 [Clostridium difficile R20291]
MEEKYILSDRGKVYYWIKESNSVFAKNLIFLPGLTANHHLFDFQIQYFSKNHNVLVWDAPAHGKSRPYLD
FSYSNLVEELKVILDKQNMKKVVLIGQSAGGFVAQSFIVKYPNMVEGLMMIGTCPYGTDYYSKSDIFWLK
QTEWMLKLFPDKLLRNIISKMCGATSEGRRSMMKMLEGYEKKELCHLMYLGFAGFMPEIQDLNIHCPVCL
VVGDKDKTGKVRKYNEQWHNKTGYPLHIIKNASHNVNVDKPSELNQIMDIFIKQLNI
>gi|260685929|ref|YP_003217062.1| putative radical SAM superfamily protein [Clostridium difficile R20291]
MIESIPAKQILQKVKFDNTRWFGIDYNMNLYRGCSHGCIYCDSRSTIYNIENFDKVRYKENVIEILSKEL
RSKRKKGVVGIGAMSDTYNPFEKQLCITKQALDLISENHFGVSIDTKSSLVVRDIPILQKIKKNNSAIVK
LTITTANDELSKKIEPYVNPSSARFDAVKELNDSGIFCGILLTPMLPFLTDNKDEIRAIVEKAHKANAKF
IYCMYGVTMRSGQREFFYEHLRDISPKLVLKYQKTYGLNYVCTIQNKDSCEKLLREECARYGILTDMKEI
IKAYKRSESYIQIKFF
>gi|260685930|ref|YP_003217063.1| putative acetyltransferase [Clostridium difficile R20291]
MIEIKTIEINKKSQIDLLMLADPCEEMIDKYLNKGTMYALYDNKELTCIAVVNEISKEICELKNIATYEH
FQNMGYASKMIYHLLDVYSKKYSSMVVGTSESGVPFYEKFGFVYSHKIKNFFVDNYPEPIFEGELQCVDM
LYLSYNF
>gi|260685931|ref|YP_003217064.1| hypothetical protein CDR20291_0560 [Clostridium difficile R20291]
MFILNFGGLIMDSNNNTIKSTVKKGISFGSCLAMIISYTAWKSIPWAIFHGLMSWIYVLYYWVKYA
>gi|260685932|ref|YP_003217065.1| hypothetical protein CDR20291_0561 [Clostridium difficile R20291]
MTSENVGEVVTEDGYAKPEYDEVFKSLFTLNNDYDLLANFINDILKDAPYANRNIKPFTHIKRIIKAETD
PTINYIGEKRPRLYILAEDEESNHINIEMQRALEDDYLERAEYYLSRVHGRKLEEGKEYKEIGKTVGIHI
LNHVKYNHIEDYVNCLRLTMDGHPNIYSSKTALYFIELPKIRKSSCIANRVLIWGKLIDNPSHIDIRILS
KTDYVIKRALDRLKELGSNEDYLLNLKRGAYIMNKSRNFKEEIFQEGVEKGKREEKFNIIIKLKNKGYNL
SEICDIIDDLNKSEVEKIYNQN
>gi|260685933|ref|YP_003217066.1| hypothetical protein CDR20291_0562 [Clostridium difficile R20291]
MKFYTIQTLEFWNNNKNNKYLSNDYSFILEDFDIPYKWMYSQMTNRIYEFDDSMIWVWTKRPDLRCSGYL
EKGKKGVLLEIEISEDNVLLSEFDLWHLPLMDITVELYEDEQIEKKVSWERIFDLELCSKLNEVNIEDLT
LQGVTSKVPLSNVKLIKEFVAK
>gi|260685934|ref|YP_003217067.1| hypothetical protein CDR20291_0563 [Clostridium difficile R20291]
MSKQQTGIKSTLISEILGISYCIGATLVNKYFFKGSSIEYLPIIIWVLAMGAQWVYNKKYDDLIDEASKC
ILSRVNDIAIKVLFFSVAIVSIFLVTLDINVSNLNIGMSLLVILFIQSLLKLILFIYFDRKGIYN
>gi|260685935|ref|YP_003217068.1| putative transcriptional regulator [Clostridium difficile R20291]
MSVLLKTKIKSYREKNLMTQGELAKSVGVRRETIVHLENGRYNPSLKLAMDIAKVFDTTVEELFEFIEEN
NI
>gi|260685936|ref|YP_003217069.1| two-component response regulator [Clostridium difficile R20291]
MDILLVEDDKNIREMVYDFLISENYFVKTAVDGNTAIEIFKNYSFDIILLDLMLPKSSGFEVLKYIRSVS
VVPVIITTAKDSDTDKMLGLNLGADDYITKPFSIVELLARIKANIRRATVYSSSRNSEDMVIQYKDLIIN
ISKYVVSKNGIDLNLTHTEFEIVKLLATNQGRAFSKEQLYNTIWKEPYYGNENVLNTHINRLRNKLSDGI
EKNNYIKTLWGIGYKMEEE
>gi|260685937|ref|YP_003217070.1| two-component sensor histidine kinase [Clostridium difficile R20291]
MELFLVVISIVLFAFYLKERNKSKKMESDYKYINSRLRDITNDDEINYILVPSDISIVKETAVDINKLLE
KFYSRQINYNRSEKAILQIFTNISHDLRTPITVLKGYIEMLYLQSQKEELSSSMRATLEKMQTNSNELVN
SINNLFNMAKIQSGDMILNLQKSNLTQLCHEIILEFYDLLDKENFNVEVNIEDRPIYANVDTEALQRILK
NLIDNAIKYGSDGRFLGISLYEKEKHVFIDIEDKGSGISETEKEHIFTRAYTADRKKGNGLGLAISQGLA
NSMGGSIYVNSRPNVKTVFTVKLKS
>gi|260685938|ref|YP_003217071.1| putative lantibiotic ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MMNYIIETHQLKKIYKDKAVVNDVNIHVKKGEIYGFVGPNGAGKSTVMKMLLNLVKPNSGEIVMFSKKVA
ETDFEILKKIGTIIENPYFYENLTAKQNLDLHCEYMGYYNKEHISEVLECVGLSKQSNKKVSKYSLGMKQ
RLAIARAILTKPELLILDEPINALDPEGIREMRELFRKLNTDYGITIFISSHILSEVEQIADTIGIIQDG
KLIKEISMSDIHKYQTDYVEVDVDNVELAGYLLEKEFGIKDFKITSESCIEIYDLRKDVKEISKIFIKNQ
IGINSIGRKQSSLEDYFFQTTGTGGIETL
>gi|260685939|ref|YP_003217072.1| putative lantibiotic ABC transporter, permease protein [Clostridium difficile R20291]
MIHLMKLELKKVGLKRYFLFSILGILLCMFFVFTGLNDKSTSIYDYDVTFRTISLVFCFYYIILFAVLNV
AYIINEYTNKTILILFSYPLDRKKLILSKLLLITTLMISSMIVGYICCFTFVVVLDKYFNLVIGDFHISI
LSYWIPGAIKSIIVFCSLGIWTFVVGMIRKSIPVTLVSSIIFINLRQFILAGTNTTQDSLISVFIIVGIT
VIGIYYILNHKVTEID
>gi|260685940|ref|YP_003217073.1| fic family protein; putative filamentation induced by cAMP protein [Clostridium difficile R20291]
MNNSFLDKLIETKELKNSLYNVLKHNFLYHSNKIEGSTFTTEALALLLDKNVVTGRHTLDDVQETVNSSY
VFDTVIDSLKEKITHNFLRNLHSSLIFNTTLHSRGMAGIYKTIPNMILGTDVSIAQPFEVEPKLDELIEW
YYSQSEVSIKVIAEFHYRFELIHPFQDGNGRIGRFVMLKQMLENNLPIKIVSWDSEDLYRNSLNSCSLGN
YVPLIEYLSSLEDFREVYKMLWK
>gi|260685941|ref|YP_003217074.1| GntR-family transcriptional regulator [Clostridium difficile R20291]
MRVVKVKSNLDEILYHKIIESLIRGEYSVGQKILLNDLCEKFEVSRTPVVQAVKMLNKDGVLTIMTNGKV
YVPEYEYDMVKQVCETRTLIETYALEKMMQEEEEVFQQKLDVIKRYSDKCEEYYRQEKSVELALADLELH
KAIVEGANNEILNDVYVGIQGRFIVVNYLIRPLKNRNYEGTVQDHFEILKFIEDRDTKKAVDKLRNHIQG
TIKRFCEDE
>gi|260685942|ref|YP_003217075.1| putative peptidase [Clostridium difficile R20291]
MKEVVESLKKITKERIENTMKKLFTSETFLEYQFISDCQISPDGGYTAFIVKKADIKENGYTSQVYILNN
KTGELKQITSINSVGAYVWEDENTILFPALRNEKVKEAVKNGKQCMSYYALSLNGGEAEELFRLPIKGGK
LNPIGKGLYAVIDSYDNDRPIVEGLPEEEQQKKINAYNKRHYEHFKEIPYAVNGEGYISRKRKRLYIYDS
NINKLKAITAPMFNVVGMKISDGKILYIGQEFKDVKGLKNGVYVFDTNTNTNICILEKDKYIIKGFELYQ
NQVILNLTDALSYGNGENGDFYTIDIDTKEMKLLSGHQHHCIGNTVTSDVKMGAGQTTKVDGEYIYYTST
VDMDCIIERIHIPTGKQEKVTQTGSVDFIDVKDGNIVCVGCLGNGLPEVYTVENGTLCKKTHLNDHILEE
YKISVPEYIESKGSSKWEIQGYVYKPVDYEVGKKYPAVLAIHGGPRLTYGPYFMHEIQVFTSAGYFVFFC
NPRGSEGRGNAFADIRKQFGDIDYIDFMEFTDTVLEKYTDIDKTKLAVEGGSYGGFMTNWIIGHTNRFAV
ACAQRSIANWSSMEGTTDIGYYFCKGQTGASHMENHELQWKQSPLAYADKCVTPTLFLHGEKDYRCYMQE
AFQMFSALKIHGCPTKLCLFEGENHELSRSGRPKQKLQRLVEMLDWFSVYIKKDNIGQ
>gi|260685943|ref|YP_003217076.1| putative peptidase [Clostridium difficile R20291]
MEKIKIESSDIFEYIFPHDISCSPDGKHIAYIISNINEEKDCYEHDLYVMDIKTEKQIHMTQTKDVTSFS
WISNTELLFTSKRNKPKAGTTDFYTISIEGGEAKEAFSIPKACSVPVSLGNKLWLLTTKNPTDSKKSEPD
RAVEGVDYWTFTDKPFIRDRENFSQRRRVTLELYQEGENITKAITPKFCEVAGIDVSSDKNRILYTGQIY
EDCATPFSGLWEYHIDSGETKELVPQGKYQISLAKYIGKDKVMLQASTLERSITQNHDIFILDLSTSEIN
MIASPDGMYATLLDVDAVYGGGRSNKVIGDKFIGARICRTMTEFNEFDTKTGNIRIITKVDAFTSFDIYD
NTMYTVMLKDYELAEIYSIDMTTGTMKKMTAFSKPYLDTHKVSLPEKLTFVAKNKEEVDGFVIPPIDAKE
GEKYPAVLFIHGGPKWAYGYMFTHLKQCVTSKGMYVIYCNPHGGDGYGEKFLEMVERWGYVDYEHLMEFV
DTCIEKYPGIDADRLGVAGGSYGGYMTNWIIGHTDRFKAAVSQRGISNLITASLIIDFGDRIMKQTCGDK
TPWNHEEVLWNHSPIKYVKNVKTPTLFLHSDRDYRCFMGDTFQMFTALKQLGVDTEMYLFHGDTHGLSRN
GRPSNRIARANAIVDWFERYL
>gi|260685944|ref|YP_003217077.1| hypothetical protein CDR20291_0573 [Clostridium difficile R20291]
MSDMLLWFSVVLVLFAIGDLIASKTKAKVSAVFVTLLLFLILFVTKAIPADIIEKAGMTAAASWSVPMIM
FSMGTMLNVKQFIDEWRTVLTAWLGIVAVIVCVSLCIPLFGKSTVLTSIPVINGALPATTIMTQAALEKG
LTLAAATATVVFAIQKFIGTPIASRAALQEANRLLVEYHEAKSKGIDLANVDTDKKEAENTGTKVKQAFC
EKYDKYYSTNVCIFFIALFSYLGYELSEIIHVNYSIVCLVVGVIVTRIGIVPKDILEKGKIKGFINMVVF
AAVIPSLAKVSLTDLISLFVPIVGMFAASIIGIFLMMKVLPGWKIIGSKPLAFGVGFCQMLGFPTTYLIS
NEVCNAVGETEEERAYLMSKIMPKLVVGGMACMISIVVAGLMVPML
>gi|260685945|ref|YP_003217078.1| GntR-family transcriptional regulator [Clostridium difficile R20291]
MKVLISNTSDKPLYQQIKEQIKEAIFTEELKEGDAMPSIRNFANDLKVSILTIRRVYEELENEGFLTRQV
GIGTFVSTGNLEILRDSKRRIVEQKMADMIKDAKALGITQIELQEMMGILYEED
>gi|260685946|ref|YP_003217079.1| ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MRRINMENILEVYNLNKTYTNFSLSNISFVLPEDCITGFIGVNGAGKTTTIRSILDVVKRDSGKIKIFGK
DFDGNEKELKNRIGVVFDDSYFYEELSMSEMKSIIAPSYDNWCEEDYQQNMKRFNLNPKQKIDTLSKGMK
MKFALALALSHKAEFLIMDEPTSGLDPLIRSQILDILTEYMKKCGRGVFFSTHITSDLDKIADMIVMIDN
GRIILEREKDTLLDEHRKVKGDIQFLNDEIKKLFLNLEITGYGFIGITSKINEVQKNMPDILIERPTIED
IMLAYIERRE
>gi|260685947|ref|YP_003217080.1| putative ABC transporter, permease protein [Clostridium difficile R20291]
MLIHLVKKDILIVKKYVLLILFIAIGIPLFILWRLPPFAQILGFVLSIIFSEFMLCQYLLLKESQYSKAS
VLLCSTPYPRRGLVQSKYVLFAMVFIYCTLVYWIENLLIPQIGTFDLTYILIVLLISSIIYGVYMPIQYK
LGYETTKFFFVMIIMASSFVLPLTIAHSNFEIPFIYQYPSMIVNIVLFLLSLIILLASMFISIKIFSNKE
LV
>gi|260685948|ref|YP_003217081.1| metallo-beta-lactamase superfamily protein [Clostridium difficile R20291]
MNLAKGLDVLKISSNVFGEDKVMYIPVIYTEDDATLIDTGLPGQGDLIIDALNKSNTSFDRLKNIIITHH
DIDHIGNINYLREKSKNNIKVYAYKSEVSYITGEETPFKLYMLEQMVDKIDDKMLSMLNVMVLGFKSSYT
KVDVSLDNHEKLNLGEEIEVIHTGGHTRGHICLYLKESKVLIAGDLLQVENGELTPVDVMHSNKQELKDA
IKNISNYDIETIVFSHGGLYQRDIIGTLKNLIIE
>gi|260685949|ref|YP_003217082.1| putative chloride ion channel protein [Clostridium difficile R20291]
MIEKFKTLIWIKMIIRIKSVYKTYGGLFLLGLIGIPVGAIIGLIDTIFGTVLLKVTDIRETYPMYLIPFL
AVVGVVIAYCYFKFGGKSSKGMNLIFEVGHGEEEIIPLRLVPFIISGTWLTHLFGGSAGREGVAVQIGAT
FSHWVGKRLPIKNASSIFLVTGIAAGFAGLFETPIAAILFAMEVLVAGSLEYQSLFPAFTASFTASAVSK
TLGLEKFSFALSSKVVFDLPIFWKLIVLGIIFGMVGGAFAWCLKLSKRKIGNRLKNPMIRIAIIGVCLSV
LFLLFYKGRYSGLGTNLIQNSFYGGEIYSFDWLLKFILTILTLSAGFQGGEVTPLFSIGASLGVLLAGFF
NLPIELVAALGYASVFGSATNTFFAPVFIGAEVFGYSYLPYFFVVCAISYIFNMDKSIYSLQKISTKQ
>gi|260685950|ref|YP_003217083.1| putative Na(+)/H(+) antiporter [Clostridium difficile R20291]
MLTSLALIFLLGMASGGIFEKIKLPSLLGMLLTGIILGSYVLNLIDNSILDISSDLRKIALIIILTRAGL
SLDINDLKKVGRPAVLMCFIPATFEIIGMIVLAPKLLGVSILEAAVMGAVVGAVSPAIIVPKMLKLMEEG
YGTEKSIPQMLLAGTSIDDIFVIVMFTVFTGLAQGNSISAISFLQIPVSIILGVIVGAVIGICLAVFFKK
VHMRDSAKGVLLLSISFLMISLETALEGIVPFSGLLAVMNIGIFLQIKYRVVARRLSVKYSKLWVGAEIL
LFVLVGATVDISYAFKAGIGAVILIFGVLLFRMVGVFFCLIKTNLTIKERLFCMIGYIPKATVQAAIGGV
PLAMGIASGQLILTLAVLAILITAPLGAFGIDVTYKKLLTSVEGKSK
>gi|260685951|ref|YP_003217084.1| putative regulatory protein [Clostridium difficile R20291]
MYLKKLSKLELVIMKFIWNLDIKTNSYEIIDYMKEEHNLPEKVALKILSKLSKKRFLYVQETGKCMYYTV
AIKEKTYLEFISRNVQNLLKNNFIRNLLVSFHEEELTEEKIKSLENWVVNWEEAYI
>gi|260685952|ref|YP_003217085.1| putative transcriptional regulator [Clostridium difficile R20291]
MQKSFYELIVLARNNSVDDLQEILFMFKPLVKKLSRVLHYEEGETDLIIFFIELIKNIKLSSFSEKSDAI
IVKYIHKSLLNKTFELSRRYSKMKFNFVEFDENILNMKNNYQSKSVFEEDICFFEYILKELSGIQRKVIF
YKYLKGYSDREISVKLKISRQAVNKAKNRAFKKIKKDYENYFNL
>gi|260685953|ref|YP_003217086.1| toxin B [Clostridium difficile R20291]
MSLVNRKQLEKMANVRFRVQEDEYVAILDALEEYHNMSENTVVEKYLKLKDINSLTDIYIDTYKKSGRNK
ALKKFKEYLVTEVLELKNNNLTPVEKNLHFVWIGGQINDTAINYINQWKDVNSDYNVNVFYDSNAFLINT
LKKTIVESATNDTLESFRENLNDPRFDYNKFYRKRMEIIYDKQKNFINYYKTQREENPDLIIDDIVKIYL
SNEYSKDIDELNSYIEESLNKVTENSGNDVRNFEEFKGGESFKLYEQELVERWNLAAASDILRISALKEV
GGVYLDVDMLPGIQPDLFESIEKPSSVTVDFWEMVKLEAIMKYKEYIPGYTSEHFDMLDEEVQSSFESVL
ASKSDKSEIFSSLGDMEASPLEVKIAFNSKGIINQGLISVKDSYCSNLIVKQIENRYKILNNSLNPAISE
DNDFNTTTNAFIDSIMAEANADNGRFMMELGKYLRVGFFPDVKTTINLSGPEAYAAAYQDLLMFKEGSMN
IHLIEADLRNFEISKTNISQSTEQEMASLWSFDDARAKAQFEEYKKNYFEGSLGEDDNLDFSQNTVVDKE
YLLEKISSLARSSERGYIHYIVQLQGDKISYEAACNLFAKTPYDSVLFQKNIEDSEIAYYYNPGDGEIQE
IDKYKIPSIISDRPKIKLTFIGHGKDEFNTDIFAGLDVDSLSTEIETAIDLAKEDISPKSIEINLLGCNM
FSYSVNVEETYPGKLLLRVKDKVSELMPSISQDSIIVSANQYEVRINSEGRRELLDHSGEWINKEESIIK
DISSKEYISFNPKENKIIVKSKNLPELSTLLQEIRNNSNSSDIELEEKVMLAECEINVISNIDTQVVEGR
IEEAKSLTSDSINYIKNEFKLIESISDALYDLKQQNELEESHFISFEDILETDEGFSIRFIDKETGESIF
VETEKAIFSEYANHITEEISKIKGTIFDTVNGKLVKKVNLDATHEVNTLNAAFFIQSLIEYNSSKESLSN
LSVAMKVQVYAQLFSTGLNTITDAAKVVELVSTALDETIDLLPTLSEGLPVIATIIDGVSLGAAIKELSE
TSDPLLRQEIEAKIGIMAVNLTAATTAIITSSLGIASGFSILLVPLAGISAGIPSLVNNELILRDKATKV
VDYFSHISLAESEGAFTSLDDKIMMPQDDLVISEIDFNNNSITLGKCEIWRMEGGSGHTVTDDIDHFFSA
PSITYREPHLSIYDVLEVQKEELDLSKDLMVLPNAPNRVFAWETGWTPGLRSLENDGTKLLDRIRDNYEG
EFYWRYFAFIADALITTLKPRYEDTNIRINLDSNTRSFIVPVITTEYIREKLSYSFYGSGGTYALSLSQY
NMNINIELNENDTWVIDVDNVVRDVTIESDKIKKGDLIENILSKLSIEDNKIILDNHEINFSGTLNGGNG
FVSLTFSILEGINAVIEVDLLSKSYKVLISGELKTLMANSNSVQQKIDYIGLNSELQKNIPYSFMDDKGK
ENGFINCSTKEGLFVSELSDVVLISKVYMDNSKPLFGYCSNDLKDVKVITKDDVIILTGYYLKDDIKISL
SFTIQDENTIKLNGVYLDENGVAEILKFMNKKGSTNTSDSLMSFLESMNIKSIFINSLQSNTKLILDTNF
IISGTTSIGQFEFICDKDNNIQPYFIKFNTLETKYTLYVGNRQNMIVEPNYDLDDSGDISSTVINFSQKY
LYGIDSCVNKVIISPNIYTDEINITPIYEANNTYPEVIVLDTNYISEKINININDLSIRYVWSNDGSDFI
LMSTDEENKVSQVKIRFTNVFKGNTISDKISFNFSDKQDVSINKVISTFTPSYYVEGLLNYDLGLISLYN
EKFYINNFGMMVSGLVYINDSLYYFKPPIKNLITGFTTIGDDKYYFNPDNGGAASVGETIIDGKNYYFSQ
NGVLQTGVFSTEDGFKYFAPADTLDENLEGEAIDFTGKLTIDENVYYFGDNYRAAIEWQTLDDEVYYFST
DTGRAFKGLNQIGDDKFYFNSDGIMQKGFVNINDKTFYFDDSGVMKSGYTEIDGKYFYFAENGEMQIGVF
NTADGFKYFAHHDEDLGNEEGEALSYSGILNFNNKIYYFDDSFTAVVGWKDLEDGSKYYFDEDTAEAYIG
ISIINDGKYYFNDSGIMQIGFVTINNEVFYFSDSGIVESGMQNIDDNYFYIDENGLVQIGVFDTSDGYKY
FAPANTVNDNIYGQAVEYSGLVRVGEDVYYFGETYTIETGWIYDMENESDKYYFDPETKKAYKGINVIDD
IKYYFDENGIMRTGLITFEDNHYYFNEDGIMQYGYLNIEDKTFYFSEDGIMQIGVFNTPDGFKYFAHQNT
LDENFEGESINYTGWLDLDEKRYYFTDEYIAATGSVIIDGEEYYFDPDTAQLVISE
>gi|260685954|ref|YP_003217087.1| putative cell wall hydrolase protein [Clostridium difficile R20291]
MHSSSPFYISNGNKIFFYINLGGVMNMTISFLSEHIFIKLVILTISFDTLLGCLSAIKSRKFNSSFGIDG
GIRKVAMIACIFFLSVVDILTKFNFLFMLPQDCINFLRLKHLGISEFFSILFILYESVSILKNMCLCGLP
VPKRLKEKIAVLLDAMTDEMNAKDEK
>gi|260685955|ref|YP_003217088.1| toxin A [Clostridium difficile R20291]
MSLISKEELIKLAYSIRPRENEYKTILTNLDEYNKLTTNNNENKYLQLKKLNESIDVFMNKYKNSSRNRA
LSNLKKDILKEVILIKNSNTSPVEKNLHFVWIGGEVSDIALEYIKQWADINAEYNIKLWYDSEAFLVNTL
KKAIVESSTTEALQLLEEEIQNPQFDNMKFYKKRMEFIYDRQKRFINYYKSQINKPTVPTIDDIIKSHLV
SEYNRDETLLESYRTNSLRKINSNHGIDIRANSLFTEQELLNIYSQELLNRGNLAAASDIVRLLALKNFG
GVYLDVDMLPGIHSDLFKTIPRPSSIGLDRWEMIKLEAIMKYKKYINNYTSENFDKLDQQLKDNFKLIIE
SKSEKSEIFSKLENLNVSDLEIKIAFALGSVINQALISKQGSYLTNLVIEQVKNRYQFLNQHLNPAIESD
NNFTDTTKIFHDSLFNSATAENSMFLTKIAPYLQVGFMPEARSTISLSGPGAYASAYYDFINLQENTIEK
TLKASDLIEFKFPENNLSQLTEQEINSLWSFDQASAKYQFEKYVRDYTGGSLSEDNGVDFNKNTALDKNY
LLNNKIPSNNVEEAGSKNYVHYIIQLQGDDISYEATCNLFSKNPKNSIIIQRNMNESAKSYFLSDDGESI
LELNKYRIPERLKNKEKVKVTFIGHGKDEFNTSEFARLSVDSLSNEISSFLDTIKLDISPKNVEVNLLGC
NMFSYDFNVEETYPGKLLLSIMDKITSTLPDVNKDSITIGANQYEVRINSEGRKELLAHSGKWINKEEAI
MSDLSSKEYIFFDSIDNKLKAKSKNIPGLASISEDIKTLLLDASVSPDTKFILNNLKLNIESSIGDYIYY
EKLEPVKNIIHNSIDDLIDEFNLLENVSDELYELKKLNNLDEKYLISFEDISKNNSTYSVRFINKSNGES
VYVETEKEIFSKYSEHITKEISTIKNSIITDVNGNLLDNIQLDHTSQVNTLNAAFFIQSLIDYSSNKDVL
NDLSTSVKVQLYAQLFSTGLNTIYDSIQLVNLISNAVNDTINVLPTITEGIPIVSTILDGINLGAAIKEL
LDEHDPLLKKELEAKVGVLAINMSLSIAATVASIVGIGAEVTIFLLPIAGISAGIPSLVNNELILHDKAT
SVVNYFNHLSESKEYGPLKTEDDKILVPIDDLVISEIDFNNNSIKLGTCNILAMEGGSGHTVTGNIDHFF
SSPYISSHIPSLSVYSAIGIKTENLDFSKKIMMLPNAPSRVFWWETGAVPGLRSLENNGTKLLDSIRDLY
PGKFYWRFYAFFDYAITTLKPVYEDTNTKIKLDKDTRNFIMPTITTDEIRNKLSYSFDGAGGTYSLLLSS
YPISMNINLSKDDLWIFNIDNEVREISIENGTIKKGNLIEDVLSKIDINKNKLIIGNQTIDFSGDIDNKD
RYIFLTCELDDKISLIIEINLVAKSYSLLLSGDKNYLISNLSNTIEKINTLGLDSKNIAYNYTDESNNKY
FGAISKTSQKSIIHYKKDSKNILEFYNGSTLEFNSKDFIAEDINVFMKDDINTITGKYYVDNNTDKSIDF
SISLVSKNQVKVNGLYLNESVYSSYLDFVKNSDGHHNTSNFMNLFLNNISFWKLFGFENINFVIDKYFTL
VGKTNLGYVEFICDNNKNIDIYFGEWKTSSSKSTIFSGNGRNVVVEPIYNPDTGEDISTSLDFSYEPLYG
IDRYINKVLIAPDLYTSLININTNYYSNEYYPEIIVLNPNTFHKKVNINLDSSSFEYKWSTEGSDFILVR
YLEESNKKILQKIRIKGILSNTQSFNKMSIDFKDIKKLSLGYIMSNFKSFNSENELDRDHLGFKIIDNKT
YYYDEDSKLVKGLININNSLFYFDPIESNLVTGWQTINGKKYYFDINTGAASTSYKIINGKHFYFNNNGV
MQLGVFKGPDGFEYFAPANTQNNNIEGQAIVYQSKFLTLNGKKYYFDNDSKAVTGWRIINNEKYYFNPNN
AIAAVGLQVIDNNKYYFNPDTAIISKGWQTVNGSRYYFDTDTAIAFNGYKTIDGKHFYFDSDCVVKIGVF
SGSNGFEYFAPANTYNNNIEGQAIVYQSKFLTLNGKKYYFDNNSKAVTGWQTIDSKKYYFNTNTAEAATG
WQTIDGKKYYFNTNTAEAATGWQTIDGKKYYFNTNTSIASTGYTIINGKYFYFNTDGIMQIGVFKVPNGF
EYFAPANTHNNNIEGQAILYQNKFLTLNGKKYYFGSDSKAITGWQTIDGKKYYFNPNNAIAATHLCTINN
DKYYFSYDGILQNGYITIERNNFYFDANNESKMVTGVFKGPNGFEYFAPANTHNNNIEGQAIVYQNKFLT
LNGKKYYFDNDSKAVTGWQTIDSKKYYFNLNTAVAVTGWQTIDGEKYYFNLNTAEAATGWQTIDGKRYYF
NTNTYIASTGYTIINGKHFYFNTDGIMQIGVFKGPDGFEYFAPANTHNNNIEGQAILYQNKFLTLNGKKY
YFGSDSKAVTGLRTIDGKKYYFNTNTAVAVTGWQTINGKKYYFNTNTYIASTGYTIISGKHFYFNTDGIM
QIGVFKGPDGFEYFAPANTDANNIEGQAIRYQNRFLYLHDNIYYFGNDSKAATGWATIDGNRYYFEPNTA
MGANGYKTIDNKNFYFRNGLPQIGVFKGPNGFEYFAPANTDANNIDGQAIRYQNRFLHLLGKIYYFGNNS
KAVTGWQTINSKVYYFMPDTAMAAAGGLFEIDGVIYFFGVDGVKAPGIYG
>gi|260685956|ref|YP_003217089.1| hypothetical protein CDR20291_0585 [Clostridium difficile R20291]
MFFGNISSPACSEDHEEVISNQTSVIDSQKTEIETLNSKLSDAEPWFKMKDDEKKAIEAENQRKAEEAKK
AEEQRKKEEEEKKGYDTGITYDQLARTPDDYKYKKVKFEGKVIQVIEDGDEVQIRLAVSGNYDKVVLCSY
KKSITPSRVLEDDYITIRGISAGTITYESTMGGKITIPGIAVEKIN
>gi|260685957|ref|YP_003217090.1| hypothetical protein CDR20291_0586 [Clostridium difficile R20291]
MGELQKIPGVGKATEKSLIMLGYTTIKSLKDANPAQMYEKECLMRGQHIDRCQLYVYRCAVYFASTENPE
PEKLKWWYWKD
>gi|260685958|ref|YP_003217091.1| hypothetical protein CDR20291_0587 [Clostridium difficile R20291]
MFESRCGVCCDSCTKKEQVNCTGCPTMEKPFWGGECKVKTCCESKELNHCGECDTFPCDMLLNKGKDQGF
DPMVNIGQCRKWLEETVSN
>gi|260685959|ref|YP_003217092.1| putative lantibiotic ABC transporter, permease protein [Clostridium difficile R20291]
MLRKSVLGEILKLKNSFIWYVLLALPLISVLIGSGNFYLNQGILKKEWYSLWTQVSLFYGEFFFPILIAI
FCAYICRLEHMNHNWNNVMTLPVNLKNIFLSKLTVVSILTAITQVFFVIFYIVAGNMFGFSGSVPKELTG
WIAKGWIISISIASIQLYMSIKIRSFATPIGISLCLSLFGMGLIVAKPAVGIFFPYSMLGSAMGVIKQSA
LNVNDTIVTICVAFITTIVFSEIANRNFRKNDVIS
>gi|260685960|ref|YP_003217093.1| putative lantibiotic ABC transporter, peremase protein [Clostridium difficile R20291]
MKYLGLEFYKLKRKKIILMTFLFVAVEIMWCIVNSNRAITRNPDMLGGFEYSYMLMSFASLNGLFFPILI
SIITSRISDIEHKGDTWKLLKSSVTSLNSIYLSKFLCSAILVSIPILMQVLSIVLFGHFRGVIESISVSL
LLKYTLGTILVSIAIIALHLWIATVIPNQMIAITFGMIGSFIGLTSGLFYQGIRRLFIWSYYLELSPLSY
AYDNVLGSSVYRIDMNFSITILVFLIGMLIYYIGRNHLLKKEV
>gi|260685961|ref|YP_003217094.1| putative lantibiotic ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MKHMEMIIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKE
LNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPKKNVNEALKIVRLENQKNKKVNQYSLGM
KQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLSEIDQIATSIGIIN
HGELVFQDSIKELHNRGQSQIAIKAKNVVSAQKLLNTKGYMSLIQNGYLTIENLKDSDVAKINGMLVHSN
IDVFRIEEHKKSLEDIFLELTGKAVTL
>gi|260685962|ref|YP_003217095.1| two-component response regulator [Clostridium difficile R20291]
MIMESIKDKKILVVDDHKELLKMIDEILRKEGFSRVFLASSYEEAVRVFRNVKPDCAILDVVLPDGDGFS
IMRKIRETSKIPVIFLSARGEDEDRLIGLGLGADDYIVKPFLPKELTLRLVGILNRVYVPIEEEELPVFK
LGDSVVVNLNSACVEKDGQEISLTAKEHSLLLKLYENKGRIVTNDSLCQAIWGDDMYGYENTLMVHVRRV
REKIEKTPSTPKHLITVRGLGYKLMIN
>gi|260685963|ref|YP_003217096.1| two-component sensor histidine kinase [Clostridium difficile R20291]
MDSVKYILRRFIGSSILISLLFIVLNIAGFLLFSYMLFVSKYSDNLDTSDSREIKSNLIMIEDNLILKDG
KFILDDSSKEVLHKNKVWAMLIDNNGDRIWGFDLPKEIPSHYTLTDVAKFSRFFLKDYPVYVWEHPNGIL
VTGYPKDKYTKFNLTYTIKEIEQFPMLIIGMFLVNAIVTFLIALFIGLKMVKSIKPIITGIKLMSKGEPV
LLQEKGILSDISKSINTVSKELQMKDEKLRKKEEARSNWIAGISHDIRTPLSMIIGYAGELEESSSLSNR
EQEQVSIICNQGVKIRELVNDLNLVSKLEYNMQALNCDKIRVSAFLRELISEFINNNLDNDFYVELDILN
EDIIIDADKKLLKRAISNLIQNSITHNQQGCNIRVTSKSDLDFCYIIVEDDGKGMSQERINSLLKSQNGL
SEAYAKGQNHGLGILIVAGIINAHRGKLDIMSIDSQGLKTILKLPLIK
>gi|260685964|ref|YP_003217097.1| putative regulatory protein [Clostridium difficile R20291]
MTIKKLPQSELKIMKFIWKSDSKVTSRDIVLGMEQKYQWKQTTTLTLLSRLVVKRFLNSQKIDKYTHYEV
LIKEKEYIGVETRDFFRNIHDSSIKSLLLSLHENINLSKDDILLIEEWIKNLKEEEKDV
>gi|260685965|ref|YP_003217098.1| putative glyoxalase [Clostridium difficile R20291]
MKYQVSLLAVKDIEVSKKFYKELFEQEIELDLGKNVTFKGGFAIQEDFAWLTGINPDTIIQKSNNMELYF
EVDDFDEFIEKLNYYKDVEFVHKPLKHEWQQRVVRIYDPDKHIIEIGESMEVIARRYLSEGYSVEETSKI
IQHPIEFVKQCENSKE
>gi|260685966|ref|YP_003217099.1| hypothetical protein CDR20291_0596 [Clostridium difficile R20291]
MIFTKSNKYDKDFLMKNMMGPNCIKILEELTSKIKLEKGMRILDLGCGKGISSIFLAKEFDATVFATDLW
IEPTENYKRFKEFKLDDKIFPIQAEAHELPYAEGFFDAVISIDSYHYFGNKEGFLDNHISPLVKEGGILA
MAMPGLKEDFVDCIPDELIPFWQDNMNFHSITWWNKLWSESESVIVEKCEALNCHDEAWKDWINCDNSYA
INDKKMMEVENGKYFNTISLIARTK
>gi|260685967|ref|YP_003217100.1| hypothetical protein CDR20291_0597 [Clostridium difficile R20291]
MGIFIFLKLNCKYYCVIYILILNVCFIRNKLIEKIVLTMKAKKVLMKIKNFIVPFYIFFYIFYYTLNQIS
K
>gi|260685968|ref|YP_003217101.1| putative acetyltransferase [Clostridium difficile R20291]
MIEGIKFIKAEEKYIYSYWQTFDKIAKERKYLAMDEAFPFEETVEFIKNTINKNLPQLFIIDLESDNCIG
WCDVLPKTEKVGYLGMGILKEYREKGIGSSLLKQIIDLSKEYGYEKIELDVFKSNSRAIHVYKSLGFVEV
NTISSGFTWNDRPVKEEVIQMELTLI
>gi|260685969|ref|YP_003217102.1| hypothetical protein CDR20291_0599 [Clostridium difficile R20291]
MNKNILNNSFPEVPESFHNSLSKTLNSLPEREENYKMINNKTHKLPFRKGLVATLAITLILSTTALAVGH
IYSLVGKSSTKATYTSIPTTEQVKKDFNFTPNIVSEFSNGYKFKGAYTVNKKALDKENNVLGKSKALSFE
YKNGNDEISLDTANNVLEKSSDNLKVVDTYKDINISYEAFAQKFVPEGYKMTEQDKIDEKSGKYTFSVGP
NNESDKVEVNEFKFLTWKQDGVYYSFTVQDSNLSMNDLVKMAHEVIDAK
>gi|260685970|ref|YP_003217103.1| putative RNA polymerase sigma factor [Clostridium difficile R20291]
MHRREGTQLDKTTFTNNILESEQTLYRVSKSILGNDQDCEDAVNNAILKAYEKLDSLKEEQYFKTWLIRI
VINECNSLRRKRLKSLSFEDVFKNKKIDEKDDYSDLYTAIQSLPKKIKIPIVLYYIEGYSVDEVKEILDI
PQGTVKSRLSRGRTLLKTKLENTEVII
>gi|260685971|ref|YP_003217104.1| hypothetical protein CDR20291_0601 [Clostridium difficile R20291]
MKFQEMINSPGLWIVSSFLVIISVVQAIVFMKSALKEASNLGIERKGIKAAIRSASVTAIGPSLSPVITL
LSLVAVIGAPTTWMRLCDVGAARTELGVISLTSNLSGVEVGSAAFGAEAFSYALWGMALNNLGWLLVVFI
LGHRMRGIVEKMNVKYNPTWVKKLLAGATVGLFAYLLSNQIKTFEIPKLTPAVISAIVMLVLTTLFKKNQ
RLQELSLGIAMLIGMFGTQIVLS
>gi|260685972|ref|YP_003217105.1| putative membrane protein precursor [Clostridium difficile R20291]
MYDKKMIKIGRISIGLAIIANFIPAIYVGLRFGQMPMLSVIFQIWGLVATTYGVSWIVQPIAYYPTLGAP
GSYIGWLAGSVGDIRMPAASMAQKIAGVEAGTHEGEVVGTIGTCCSIFVSASMITIFTIVGYKVIPLLPE
FITDSFNYILPALFGAIYVDIARKDIRAGGCTIAVALAIMYFGEKIGIPGGLLTLFIVLGGILITRVFFV
IDSNKTKE
>gi|260685973|ref|YP_003217106.1| amidohydrolase 3 [Clostridium difficile R20291]
MFDVKIANGIIIDGTGNSRYKGDVGIVGDKIMAIGDLSQKEAKETIDATGKFVSPGFIDFHTHSDLSLVY
DKYTRSRIHTGVTTDVIANCGIGVAPIREEKKQELIDYLGTRIIGTIPIKLNLHWNTMQEYFDYLTENSP
AVNVVAYVAQGPVRINEMGFSKEPATLEQLKNMKLEVRKAMEAGCVALSSGLVYLPGAYTKKEEMAELCK
ELIPYNGYYISHIRDEGDEEMEALDEAIYIAKTAGVPLHISHLKVMGHKNFGTIDKVFKKLDEAEADGLE
VTFDCYPYTAGMTSLGALLPPWAFEGGVENMVKRLEVQENRDRIIKELEEGIPGWQCFYQLAGGWDGVVL
ASVMTEANKYVEGKTLMEVAKINGENPFDTFFRLLIEEKSKIQVVVHTQGQEDTDKVVCHPKSCIGSDSM
DLSTEGLLSLGKPHPRAFGTFGRIFSYYVREKGMLTFEEAVKKITYLSAKRLGIYKERGLLKENYFADIV
VFDPDTIEDKATYSNPKQYTVGVEYVLVNGKIALAGGKQTDVCAGRVIKNPLSIAK
>gi|260685974|ref|YP_003217107.1| hypothetical protein CDR20291_0604 [Clostridium difficile R20291]
MKILYVGPGMVIDKILAVSKKNFPNIEADFLRYDRYIEVPDLLEKYRGRVDAVLFTGKSPFKFFEKRQKD
FVLSDYIPRHETTLYRVLLEITYLLKFDISRLSIDTYDKAMLKRLYKEIGVEFKDEHMFFAEQKYLEEDY
IKFVLEFHKYNYQNNDICCCITGLEEAYHAMKKENIPVVLALPSEDVMVQSIKNIQMRYIAKKNNENQIV
VLAIKLNMPSEYSLMKEDEYAYLSQRIKILDKLYHFNSRIDGVLVEQSRSEFMIFTTKKILELETKKYRD
IYLLDMIREVSVINTYIGIGYGKTANEAKFNAYESIKMAQSQKNDAAYVVFENGEIMGPLKPNPAVKEKN
SFDERFYQIATETGLSANTVYKVFNKIINSGKTEFTSKELAIICGVSIRTMDRIILRLCDSGYCEVVSEQ
LMSKYGRPSRILRFKPFLLF
>gi|260685975|ref|YP_003217108.1| hypothetical protein CDR20291_0605 [Clostridium difficile R20291]
MGKYQDSKKVVRNYFEALENATGDEVENVLKQHMKSDYNWKGVYPFREQEGTENVADVFWKPLKKSLSNM
QRRQDIFIAGTNEIDNSEWVMSMGHFMGLFDKDWLGIKHTRKMISLRYAEFNCVQDGKIAKTGLFVDIIG
FMIQAGVNPLPPQTGSYFVYPGPIDHNGLLFEDADEVEGVKTLALVNKMVDDLSELNESGTMGCPPEILK
KSWAKDMIWYGPGGIGASYTIPRYQEQHQLPFRNNLKGKTFNGHVCRFAEGNFACFFGWPNLTNVPCGGF
LGLPGGEVKADMQVVDVYYRKGDKLQENWVLIDIPYWLKQQGLDILERTKSIFNA
>gi|260685976|ref|YP_003217109.1| hypothetical protein CDR20291_0606 [Clostridium difficile R20291]
MASTNKNNVTSKEEEKEVSTSGLESCTVKENKAKMNQTNFSNINENQTNENKTNTYKGNIDKINTNKSDI
NKVNIDTVDTDKLNTNTLTEKNKKVIFKGEDNMSSTKIYYGDSLEVTPVGVMDYNDFSKQTKREQEIPGF
DSKYRDFVDYIMKITHNIWEEKGIGVIYDTYHNNVTMHCGSSNLVGIKDVISNTLQTLHAFPDRRLIGQN
VIWSNFGADGFLSSHRVLSTATNLGDSNFGPATGRKINFRTVIDCATTNNRIHEEWLVRDNLWIVTQLGL
NPQEVAKSMAKASESKVLSLQSTYGICESMDGQFMPTKYQAKDDSVGEMMLEMTSRIYNYKYINEVKKYY
HDNAVVHFICDKDLNGYDEIQGMIVSLLASIPNGSYEVERVTCNQREKNEGYDVSIRWRLRGINEGIGFF
GQPSGKHIEVMGINHYHILQGKVKEEWITFDGMDVLKQMYMGVEE
>gi|260685977|ref|YP_003217110.1| putative transporter [Clostridium difficile R20291]
MFKLLAKIMTKFKRGNYKNMKTTVEIENDIILGKDYSNLKRGIAFFSIALIYFFYCYNFMVGTFIKPTMI
YALADGGFGFSLKQTEEIFAVMSFGTIPGTFIFGVISTKIGKKRTLISVALLIGLTTFIPMLSPTDIMLW
KIARLCTGVVLGGVFGTAMPLVADMFPSKYRGKLAAILTALFSLAMIFGGKVYGVLGDANWQILMYTAII
PPIVGAILAIFFVPDDLEYTKELVKKGKETGEKISYISMYKGKYLWIGLGTILLSGANFTAYSAFSNNAT
TYLVTGIGMSAAVAGSIYSLQGIGQLVGYLFWGSIADKFGRKIPFIGMALAAVFVFIYTKLGGDNTTTFY
MISVLLGVAVGYSGAWGAYYTELFPSKYRSLSSGMSFNGGRIISTFAIPAIAGTASGTLGMMTIFYISIA
VFVAGAIVWLFLPETLNNKK
>gi|260685978|ref|YP_003217111.1| putative sodium:solute symporter [Clostridium difficile R20291]
MISSIDVCIIIGYLLLMLVIGYYSGKDNKNQEDYFLAGRSMPWIPIALSVAATMISANGFIGGPGWAYVD
GMYPVMVKCAKNSFVVSAFVMNLVYYFMLLVGVILFVFYGGRTFETSNEIMITFILNELPVGAIGIIIAG
VFAAAMSSIDSILNSMTTVFTKDIYEFYFKKDNKESSLKVTMIITVVIGVVMTGFIIMGFGGSIKSILDL
VGNYISYFAGPATGAFVLAMFTYKANDKGVSIGFIVGLVLGFFISNKYNVSWLWNPAIGATITLIFGYIF
SVILKKNHKVDDIKKYTAFGMRNHLISQGMDKVDGVSIVPFSLGKQELIVLAFFIIQYIILFLIQF
>gi|260685979|ref|YP_003217112.1| LacI-family transcriptional regulator [Clostridium difficile R20291]
MNQKKVHYNKSATSKDVARLAGVSQSSVSRAFGSANGKGVKPEVRERIFRVANEIGYVPNLVARGMISGK
TNVIGLIVGDSLGPFYNRIINLFVEKIQEIGKQCLVFKVPRQQSIDSIISKVIQFQVEAVIITASAMNKV
MAETCEENNIPVILFNRFIPGIKISTVYVDPIEGGGMVAEYLLKKGHKNIGYIQFTRETSEEMEKKIGFY
SKLRQSGIHNLKEESANYDYDSGYEAGKRMLALSNPPTAIFCTSDLIAIGVMDAARFEYKLRVPEDLSVI
GYDDIQMASWKSYNLTTIRQPLDLLIEKTINILKSLLNEENPESVVEMLKPELIERGSTL
>gi|260685980|ref|YP_003217113.1| putative ATP-dependent peptidase [Clostridium difficile R20291]
MKMLNNFFKKINNPAPVFAQTKMERDNQTDDSLSTKPKTTFRDVAGLDEVKEELFEIVDFMKSPQKYQKM
GAKIPKGVLFYGPPGTGKTLLASAVAGETNSSFFNVTGSEFVEKYVGVGAKRVRTLFEKARKEAPSIIFI
DEIDAVGAKRHLESNNEKDQTLNQLLVEMDGFNKDSNVLIIGATNRLDLLDEALLRPGRFDRHIHIGAPN
YHTRFEILKVHTDDKPIDKSVNLELLAKKTHGFNGAHLSNIANEAAIFAVRDDSECITSEHFDKALERVI
AGLESKNSALVEKEKKIVAYHEAGHALVSDIVGICPIQKISIVPRGQALGYVLQLPDEDRYIYTKDELIG
KIKILLAGKASEELIFNHKSTGAKDDLKKVTEIANQMVCEYGMSNLGFMTIDGNDKTFLCDKVQKEANRI
VEICYKETLEMLKDNLEDLHSVSKFLFEKETMTHEELKDLIGKEAVN
>gi|260685981|ref|YP_003217114.1| translation initiation factor IF-3 [Clostridium difficile R20291]
MPTKEAQAMANSKNLDLVQISPNANPPVCKIMDYGKFRYEQARKEKEAKKKQKTIVVKEVRLRPGIEQND
LNTKANNAIKFLKKGDKVKVELRFRGRELGHKDIGKEVMLKFLDIIKEFGEPTKAPAFEGNNMVVIIDPK
K
>gi|260685982|ref|YP_003217115.1| 50S ribosomal protein L35 [Clostridium difficile R20291]
MPKMKTHRGAAKRLKKTGTGKLKRAKAFKKHILTKKSAKTKMNLRKSTLVSDGDAKRIAQLLPY
>gi|260685983|ref|YP_003217116.1| 50S ribosomal protein L20 [Clostridium difficile R20291]
MARVKKAMNARKKHKKILKLAKGFRGSRSKLYRPANTFVMKALKNAYIGRKLKKRDFRKLWIQRINAAAR
MNGISYSRLMNGLKLSGIEVNRKMLSEMAIQDPEGFAKLAEVAKAKLA
>gi|260685984|ref|YP_003217117.1| hypothetical protein CDR20291_0614 [Clostridium difficile R20291]
MNEKLMDCFVNPIKCKLLLEVFSNNRTTAKQLGEKFQDISKATLYRYLNKMLKDDIIKVVEENKIRGTVE
KVYAMKLDIADDVNKIIDENSGEEYAQLFTQYMMGFLREFYEYAERKEKDILKEGSGFSVCPVYASIDEI
VEVSKKIASILEPLRNNSHEEGRRMHSIGVIITPPKEDEGK
>gi|260685985|ref|YP_003217118.1| putative nucleotide phosphodiesterase [Clostridium difficile R20291]
MKIKFVIMPLVIFLIVLFVGCQSTKDTEVKAKDTEIKILGTGDLHSILTDSMVSYVNEEREKNKNLLMVD
AGDFYGTQSREMWEWSSGKKLINIKRNGRAEYDDIIKSSKDEVPIVKDMAKLKYDAVVLGDNEFISNDKQ
SLDKLVSDFKNNNMPLVSANIYEQSGENYVQPYVMKNIKTDEGNVKVGILGLTIKEVGETLGLEDFEKDK
KARELGEQADYKGKLYANDLVEDAKKWIKVMEKESPDIIVAVVHSGEEPKTDRNPGNRIKELATTVDGID
AIVAGHTHEKIDEHKYKNKSGDEVIVTQPGWHGDRVSEINFKLNKENGKWDIKEKSSKLKIIDKEVSIVA
TADLHSHFSDKLTVDLVNERSNPIEPVVVDAGDFLDPQTDEMTQWYKEWKSIRDNNSDKTISRCPMVMDM
NQGMYDAVVLGNHEFVSEKDEFWSDERLLDAVIEDFEQVAISVLSANIYRQSGKNYVKPYIIKDVETSEG
NVKVGILGLTIKEVGKGLKNVNLQEQFQYKDKLYANDLVEDAKKWVKVMKKKKPDIIVAVVHSGEEPKNP
KHPGNRIKELATTVDGIDAIVASHTHEKIDEHEYKNKSGEKVIVTQPGEHGKYYSKITFKVNKEKGSWII
NDKFSKTIEVE
>gi|260685986|ref|YP_003217119.1| putative nucleotide phosphodiesterase [Clostridium difficile R20291]
MVKIKCDIKFYYHPKSKEESLMKIKFIIVASIIFLIVLLVGCQSTKDTEINVLATSDLHSIIPDNLISYV
EEERKYDENLLMVDAGDFFDMQSGEMNKWFTGQKLVRFKDGIPEYKKIAEPREGEVPLAKKMAKLKYDAV
TFGNHEFVSNDKQSLDKLVSDFKNNNIPLVSANVYEQSGENYVKPYVMKNINTDKGTVKVGILGLTIKEV
GERSRFKSFKQDKKARELGEQPQYKGKLYANDLVEDANKWVKVMEKKEKPDIIVAIVHSGEEPKNPKNPG
NRIKELATTVEGIDAIVAGHTHEKIEQHTYKNNSGEEVIVTQPGAHGNSISKINFKLDKKNDKWFIKDKY
SELKVFGKEVNIITTSGLNPKFSDEMAVNLFNERDRDVQPIFIDTGDFLNTNTKEMTKWAKEWQYNENKG
IYKKINEWPIVYLGYDAVVLGSHEFTEDKETFEGKKSTLDYIIENFEEMKIPVLSANIYDESGENYVKPY
IIHNVETREGNIKVGVLGLTTTDKDEEDLSSSSLSKDSKTSKIPEETGKLYTNNLVKDASEWVKVMQKES
PDVIVAVVHSDNNSTLKNPSSEVKKLAMSVDGIDAIVVGHTKNKVEEHIYKNKSGDEVIVTQSGEDCYSK
ISLELRKENGKWNIINKYSKAIKMK
>gi|260685987|ref|YP_003217120.1| putative short chain dehydrogenase [Clostridium difficile R20291]
MNYKKIAIITGANSGFGKEFLKLLINEEEITEIWAVARNKARLNQLVDEFGSKVKVFSKDLSKIEEVKEI
GTFLSKENVCIKYLINNAGFAKFCSYNDLSIDESINMIDLNISAVVVLGLICIPYMQKGSHIMNISSQAS
FQPLPYQNIYSSTKAFIRNYTRALNVELKSKGINAIAVCPGWMSTNLFKRGIVVAEKGTKNFPGIVSPDV
VAKKALKDAKKNKDISVYGINTKSSHLLAKLLPQKMMMKVWLMQQHIKE
>gi|260685988|ref|YP_003217121.1| hypothetical protein CDR20291_0618 [Clostridium difficile R20291]
MIVDYLYNLIFLEGGVITLKLKIVGSGGMSIIPSSFCKCKICEEARQKGGRYERLGPSLYIDDIKMLIDT
PEDITVACNRQKISEVKHISISHHDPDHVKGIRIVEKIGCDFITGENNPIGFYALPEVIEDINRTNLDCL
KYYGDVINCISINETSHVKINNFDIDLINNNPDRNITFYVIKENEKKVIYACCNPKPFTHSDMYFDADVL
IISLVSDDGILNDGTKLEDTPFKDEIFTLDEIVEIKNYYRIKKIIITHIDEMWGKSYGYYSELEKKLDNI
YFAYDGMEIIV
>gi|260685989|ref|YP_003217122.1| MerR-family transcriptional regulator [Clostridium difficile R20291]
MFKIGDFSKLSKISIRMLRHYDEIGLLTPSHTNNTNGYRYYSADQLSTTNRIHALKDMGFGLYSIKEILT
EYNDKESLIKYLNIHHSQVKEQLEDTQKKLLKIETTIKRIGGNDIMKNYDVTIKNFAPKYMMTLRRVIPT
YQDEGMLWHQAFLETKDQNVQIEPPKYSKAVFYDTGYKEDSVDVEVQVAVSGKYKDTEHVKFKTVPSVTA
ATAIVNGNFNQVADACEAIGNWISDNNYDVDGPMFNIYHVSPGNDSNPDNWVTEVCFPVKKK
>gi|260685990|ref|YP_003217123.1| TetR-family transcriptional regulator [Clostridium difficile R20291]
MKSNDKDARERIIEVTLNLLNEVDDIEEITVRKIAERANVGVGLINYHFKTKDNLLSTAIGDVMSNIIAE
LYDDSVYTLRPIEDLKNLLKKLCDTGLHYEKVLPFVLNQCITNGDMQAELDIVPMLRKIFGNKKDEMSLR
IIALQIILPIQISALSTESFQLYSGINIKNKYERDKFIDILIENIIGEDVDVR
>gi|260685991|ref|YP_003217124.1| putative exported peptidase [Clostridium difficile R20291]
MVKSKKKIFVFLILIAVFIIFASYIRNYTNDTKKDSVRGTIPFEKMEYKRPNIQSICENINKCNDKLLTA
KTAKEQLNLFNEVDKIYQDFYSTLTIAKIRNNIDSSDEFYSKEYKYLMSKSVDVDMSYKDFQDRFVTSKF
SKELEKELGKDTFNYLKNIGKLNSKEVEDLLKKEQDLVVKYEDLLAKSTVSIDGIEVDFEEALSRPNLSP
EEYVKIYSDYLKKYNPIFGNIFLELIQTRTEIASKQGFKNYIDYAYMNLNKDYSQEEAKKFRQDVKDYIV
PLYREISSKPSDSSIYIKVYKNRSFRKFDKVLEDISPKLKESFDYMKKYDLYDYSSGKNKSPGGYTTYIN
KYKAPFLFNTWDNSFLGVTSFAHEFGHFYNYYNSINLNNKMQPSIDVCEVHSTSLEILFYKYFDDFFGKQ
SEAIKKEHLSIVLNTIIDACLYDEFQEIIYKNPYMSLNDINKLFFDLEEEYGVSNNILREKNAPFWILVS
HNFQVPFYYLSYGLASDVSLQIWQLSQEDYRKAVDVYMDFLNQNTDAGFKDVVEKVNLQLPFQDGNLEEI
SSTLYDYFGIDNPLELKNAS
>gi|260685992|ref|YP_003217125.1| putative cation transport protein [Clostridium difficile R20291]
MRPTQIMVSGFAAIIVIGALLLTLPIASQSGESIGLLNALFTATSAVCVTGLVMVDTATYWSLFGQIVII
TLIQIGGLGFMTVATMFSLMARKKIQLRERLLIQESLNQADLSGLVRLTRFVLIITITIEGIGALVLSTV
FIPQFGLSKGIWYSVFHAISAFCNAGFDLMGSVSGPFTSLNSYVNNFTVSMTVCALIVLGGLGFPVVLDI
VRKRRFSKLNVHSKVVLFSTATLIFVGALFIFLIEFNQKATMADLPLKGKVLSAIFQSVTARTAGFNTLD
LATLRESSVFVMIILMFIGASPASTGGGIKTTTLAVLIITVRSFLSGKSDIEAFERRLAPSTIKKSLGIF
VISISAVIFGTLIISITQPNFTLVQSAFEVTSALATVGSSLAGTPNLNALGKIIIIIFMFMGRVGSLTLF
MAILSGGRRKSQPIRYAEGKIMVG
>gi|260685993|ref|YP_003217126.1| putative cation transport protein [Clostridium difficile R20291]
MKQYIVIGCGRFGSSVASTMHLLGHQVMAIDKNEDSVQSISDKVTHSLIVDVTDEQALRSLGLGNFDVAV
VAIGSDIRASIMATLIAKEMGVELIICKAKDELQAKVLYKIGADRVVFPERDMGVRVAHNLVSDNILDHI
ELDPEYSIVEIVTPNSWVGKTLIELELRARYEITVLAIKTGKNINVTPSPDEELTAGSILVIIGQNTSIT
AITSGNKGIIRRR
>gi|260685994|ref|YP_003217127.1| putative RNA methylase [Clostridium difficile R20291]
MITNINSKDNEKLKYTRALLKSKNRNKESKFIIEGYRIVMLALECMANLDYVFINEEFENKKEHVKLLED
LDKKNTKIYKTTNKNFKELVDTENTQGIIGVVSFKKKKLSESINKKDKFVLILDRIQDPGNMGTIIRTAD
SAGVDAIIALKGCVDIYNPKVIRSTMGSIFDMNIIDASQDETVDMLKSLDFNIVSSYLNTENFYDKIDYG
SKVALVIGNEANGINEELVSKSDILVKIPIYGKAESLNAAISSAILMYEIKKYLI
>gi|260685995|ref|YP_003217128.1| phenylalanyl-tRNA synthetase alpha chain [Clostridium difficile R20291]
MICVQEKLLALREAALAEIKEAQSIESVESLRVKYLGKKGEITAILKEMGKLSAEERPVVGKVANEVREN
IELSINSKKEEINAIEKERKLKEEVIDVTQPGKVLKVGKKHPITQIIDEVTDIFIGMGFSIAEGPEVETV
ENNFDALNAPKDHPSRDMSDTFYINDGVLLRTQTSPVQVRTMRSQELPIKVIAPGRCFRSDSPDATHSPM
FHQIEGLVVGKDVTMAEFKGTMDIFVEKLFGSDIKTKFRPHNFPFTEPSAEVDVTCFKCGGKGCPMCKYE
GWIEILGSGMVHPNVLRNCGIDPEVYSGFAFGVGVERLAMLKYEIDDIRLLFENDMRFLNQF
>gi|260685996|ref|YP_003217129.1| phenylalanyl-tRNA synthetase beta chain [Clostridium difficile R20291]
MLVSLKWLRDYVDIDMDVKEFADKMTMTGTKVETIDYYGEEIENILVGKILEIKQHPNADKLVVTKVDIG
DKVVQIVTGATNISEGDYIPVAVNGSKLPGGVEIKQTDFRGELSDGMMCSAAELGIDEHYIEEYKRGGIY
ILDHEDSYELGKDIKDVLGLKDALIDFELTSNRPDCKCMMGIAREAAATIGTKVKYPEIEVKESDEEIDF
KVEIDNPDLCRRYVARMVTDVKIEPSPYWMQRRLTEAGVRPISNIVDITNFVMLELGQPLHAFDINQVET
GRIVVRNAKDGEKLVTLDDVERTLDKDMLVITNGEKSLGLAGVMGGANSEITSNTKTVLFESANFKPENI
RMTAKKVGIRSEASSRNEKDLDPNLAEIAANRAAQLVEMLGAGKVLKGVVDVYPNKPEPKKLVVNPQRIN
HLLGVDVPMEQFVGILESLEFKCNLVANDKLEIDVPSFRTDMEQEADVWEEIARIYGFENIPSVQLEGNT
TAGIKTSKQKFMDALKDNSTAVGLNEILTYSFVSPKGVDKIRVPEGNAKRNFVKLLNPLGEETSVMRTTL
IPNMLDVLSTNVSHKIEEVSAFECGHIFIPQDSELPKEENRMCVGMYGKDVDFFALKGTIETILVNVGFK
GYEIEPQDNNTTFHPGRCAKIVYNNKYVGTLGELHPDVIENYNLGQRVYVAEIDIDFVFDNSDRTKNYVP
LPKYPSTSRDIALIVKDDVFVKQIEDIIKENGQGLVESYKLFDVYKGSQIEAGYKSIAYSITYRSKDKTL
TDEDVAKVHDKILSELSEKLNANLRSN
>gi|260685997|ref|YP_003217130.1| hypothetical protein CDR20291_0627 [Clostridium difficile R20291]
MSGEVRMNKVMVKIHGAEYPMVGDKSEKFMISIADFVDKEMDKITRQNPKLSLSVAAILTALNISDLLFE
CSDENEKLIKANEELSKKVGASNEELQLEIKSLKLTIAEKEAENREAETKMKELIEIIENKKQEIFELSN
TTEGSRAELDVYKNKIEELSTQLEEANERATIAENLASEFQNKAYDLQLKCTGLNNDAKNVE
>gi|260685998|ref|YP_003217131.1| hypothetical protein CDR20291_0628 [Clostridium difficile R20291]
MTSKSQMSESFFLCSLLAITGGFLDIYTYVVRGKVFANAQTGNIVLFGLNIAEGNVKESFYYLIPILAFM
LGVFIAEKIRKYFTNNKTKIHWRQVIIIIEMITILIVSFIPRGRFNMFVNVAISFICSMQVESFRKVNGN
SFATTMCTGNLRSATETLFHYIHTKNIFMIKKSLQYYAIIIFFISGAILGTFFTKIFVEKSILICFFILA
VVFGIMFINKDDSFNEN
>gi|260685999|ref|YP_003217132.1| protease [Clostridium difficile R20291]
MKKIELLAPVGSFDSLKAAVQNGANAVYLGGKDFSARASANNFDRNELIEAVKYSHIRGVQVFVTVNTLI
KQYEIEDFVEYVKFLYDIDIDALIVQDIGMARLIKKLLPDFELHASTQMVAHSLEDVKYLQSVGFDRVVL
ARELNVDEIKWICENTTVDIEVFVHGALCVCYSGQCLMSSMIGNRSGNRGRCAQPCRQKYELIDINTGEV
VKSNGDYLLSPRDLSTIEDLDKIIETGVLSLKIEGRMKKPEYVATVVSGYREAINEFVDKKKISISEEII
NNLYTIFNRKFTKGYILGEVGKDIMNSNRPNNQGLYIGKVLDYNRKNKRLRVMLENTLKKGDGINLGGGT
IGRIIKDGEITTIAHKGDLIELDFVGEAKRNQLIYKTSDSELMNRVQATFQQDKEFIKTNIRAKVSIKLG
KKPELFISDFCGNKSVVEGDKIVEKAIKVALSKEKIETQIQKLGNTPYKLKEIEIDLDEGVSMPISVLNQ
MRRDCIELLDEERIKIKDRKFKKNRLKYQPNRVNKQKKLDTVPKIRVKVKNLEQLEAVLNYNVDLIYYED
INTLSKALQMASSISIDSSISIDSSISIDSSISMDLDTSSSLGIPKELMGSNTNNIDTLSNTSKIDTLNK
NHYNTAVTDKKLIYSAPRIVRNKEYKQFEILDNIKGINKVQIGNWGSMEYFKKKDLNIDCYLNAFNSESI
NHFKEEGASTVCLSQELNLNEIKQTLKYTDVEIEAVIYGYAPMMVTEYCPMGVVVRDCKKDKRVAKCKES
SYALRDFTDASYRITQDIFCRSTIYNSKVTCMLDNLYELEEIGIDVFRIDFTVEDSEMVKKVIEAHIEVL
SNNYKLGKKATDLYKKLDEIGTVAGHYYKGVE
>gi|260686000|ref|YP_003217133.1| putative phosphohydrolase [Clostridium difficile R20291]
MREEALEILFKYLETDRMRKHCYAVEAVMRELAKRLEPEKEEEWAVAGLLHDLDSDIVGRKPGEICEGHA
TTTVELLKKENFGDEEMYRAILGHHDGMGVTRTSLMEKAIYAADPITGFITAIALVYPDKKLTSVKTKSV
IKRMKETRFASNVNRDAMRSIEDIGIPFDEFAELSLNAMKNISDVLESAENN
>gi|260686001|ref|YP_003217134.1| putative DNA repair protein [Clostridium difficile R20291]
MKLTTICYIEKDDKTLMLYRNKKKDDIHEGKYVGVGGKFEQGETPEECVIREVKEETGLTLKSLSYKGLI
TFPKFKDEEDWYMFLYFSDEFEGELSEKDLNDCKEGNLIWVGNDKIFDLNMWEGDRLFLNWAKTGNIFSA
KIVYDNGKLKDYNVSFLD
>gi|260686002|ref|YP_003217135.1| putative reductase [Clostridium difficile R20291]
MIDINLEKCVGCGMCESDCLVNAIKVKDDKAKVKNILCINCGHCMAICPTDAIEMQGFDKNEVIEYNRES
FELEPEKLLNFIKFRRSIRQYKDIEVEEEKIKNIVEAGRYTPTGGNRQPIRYILVKEKLKEVKELAIQGL
YNLALDTDDNDPVRSIYKNTFKKMYKRYKENGNDSLFYDAPLLMIVVGDMSLGGSAYVDGGLAASNMELM
AYSQGLGICYNGFFVMASNVEPKIKELLGMSENEAVITSFILGYPDVKYKRTVNRNTAKFEMR
>gi|260686003|ref|YP_003217136.1| putative signaling protein [Clostridium difficile R20291]
MEDCVVNLKKLLLLIIVITSIFTSCIFSFGINAIGNDNRTIRVAYPIQKGLTEIDEQGNYFGYTYEYLLE
IAQYTGWNYEFVQVPGEINESITKLMKMLENGEIDIMGGMLYNEPMQKIYNYAGNSYGVANTVLQALYEN
TDIDNIMSSQDVKKIRIAVIENSDTRLKELDEYCKMNLMSPELVYCKTSDEQLEVLKSGKADVLLNVSMN
PIEGVRTVAKFSSKPFYFITPKGSTDLTQKLNSAINNIEQKDPYFSTTLYEKYFTPENNQMFLSDEETNY
IKDTEKLKVGVLLNKPPFQNADKDTGELRGISIDLLNHICDKTGLEFELVPVKSQEDLEDMAKKHEIDIV
AGMIYDYEYSREHNIAMSRPFLSTQYTMMINNKLNENSLNGKRIALAKGIDYYGQFEENIVWYDNLEECI
EAVNKGYADYTYGEGYSMQYYMNQPKYKNVRLVPQTYEAKSICFGIIKKDKQELLNIFNKAIISISSEKM
QSIVYQNTTYRQDFSLLYIMQQNPIETIFIVASLLICIIGFMAFGLHTRTSMNEKISLELKKHTQLYEMT
SEYFFEYDYKQDKLIISMPEKGIETYYGLDKSDKESENGNIENERDKIRREYNKKFFDVIKSQENGTTEM
YSIMLDDTFHWIRITSKIIYNDRKIPMYVIGKIANIDSEKEEKNRLLDKVQRDSLTNIYNAAYIRKLTTQ
NLLNLSTEKNGALLIIDIDYFKSINDTYGHLVGDKVLIDVAKVLDESFAKDDIVGRLGGDEFSVYINDII
NKEELINKCNDVYNHIHLIKLPNGESLSISMGVVITKRGQEYDELYQIADNALYDSKRQGRNRFKIV
>gi|260686004|ref|YP_003217137.1| putative aminoacyl-histidine dipeptidase [Clostridium difficile R20291]
MGNVLEGLKPESVFKNFEKISQIPRGSGNEKGISDFLLSFGKNLGLETIQDESLNIIIRKPATKGYENCP
GVVLQGHMDMVCEKEKNVEHDFLKDPIKLRIDGDMIYATGTTLGADNGIAVAMGMAILEDNTLEHPALEV
LVTVNEEDGMNGADALDPSLIKGQYILNMDSEEEGYLLVSCAGGKTCVVSLPVEYKEVKGDKQGLLVEVT
GLLGGHSGMEIVLQRANANKAIARVLSVLNVDYELASVDGGTKHNAIPREAKCVIAVNKADVESAKKQIN
DILTAFKHEFTTSDPGMTYSVAETSVDKVLTKDCKEKVVQMSCLTPHGVQSVSLDIEGLVESSTNFAIIE
TKESTIEFLTSVRSSVMSIRDEIADRIRLLAQALGANYDLIAQYPAWEFKKGSKLEKICSETYEKLTGKV
PTVMALHAGLECGLLLDKLPHAEAISIGPDMFDVHTPNEHVSIPSVANVWDYVIEILKSMNQY
>gi|260686005|ref|YP_003217138.1| putative DNA mismatch repair protein [Clostridium difficile R20291]
MNEKSLRVLEYNKIIDLLKKKASSSLGLKYIENLVPNTDFVEVKSMLEETSEAQSIIIKRGSVGLEGIHD
IEDKVKRAYIGASLDPGSLIMIADTLRVARRLRNSLSSSDEEDFNYPIIQSLSNSLYVYKDIEDQIYNAI
ISEVEISDNASSTLRDIRRRIAQKNQSIRSKLNSIISSTTYQKYLQDAIISLRGDRFVVPVKSEYRSQVA
GIVHDQSSSGATLFIEPMTIVEMNNELRQLKLGEQEEIERILSEISAMVGEVSEDLISNQEILGRLDFAF
SKGKLSIQMRGIEPTLNEDKYLNIKNGRHPLLDKKKVVANTIYLGRDFHTLVITGPNTGGKTVTIKTVGL
FALMTQSGLHIPADYGSSMCVYDNVFADIGDEQSIEQSLSTFSSHMTNIVSILQNVTADSLVIFDELGAG
TDPVEGAALAIAVLEDINSVGAKCIATTHYSELKNYALTKPGVENAAVEFDIETLSPTYKLLIGVPGKSN
AFEISRKLGLSDYVISRAKEYINTENIALEDVLQNVEKNRIKAVEDREEAERLKEEIEKLKVEYDEKLEK
LVSQRDKMIEKAKSEAFSIIRQAKEEVDIIIKELRNLEQERASKEKNRKIEELRKELTSSMGSLQPTVKS
MIVPKVSNKEIKDLKPGEEVKVITLNQNGSVVSVDKKRKEAVVQIGIMKMTLPFKSLQKTRKDVSTNVTK
STRNIIRSKSGSVKNEVDLRGLNLEEAIMEVEKYLDDAYVAGLESVTVIHGIGTGVLKAGLQDILRRNRH
VKSQRGGQYGEGGAGVTIVKLK
>gi|260686006|ref|YP_003217139.1| hypothetical protein CDR20291_0636 [Clostridium difficile R20291]
MLFYLFLYINISFIYFFYSFIYFYTSILALYTFFTLLSIFYKSFSLLIFIPSSSNSLAVIPFPGIFLPEK
LPSYIRLHPQEGLPSFSIASLHTYKFAIFRVSLAPLTKFSVTSLLSLVITFPSTISAGGLGVDRPPNCSG
HTSVNSLPFKYSLTFSFSLLSPLYLQFIPIKHADTNIIKMCSYTNS
>gi|260686007|ref|YP_003217140.1| arginyl-tRNA synthetase [Clostridium difficile R20291]
MQDFKVAISNCLKEKIEDLSKEEIEALIEVPPNKDMGDYAFPCFKLAKVFRKAPNMIASELAESIEPSGE
ITKVIQLGGYVNFFVNKSQLAETVIKKVLDEKENYGHSDFGKDKTVIVEYSSPNIAKPFHIGHIRTTVIG
NALYKIYDSQGYKTIRINHLGDYGTQFGKLIVAFKKWGEKEVVESNPIPELLKLYVRFHDEAEQHPEMED
EARAWFNKLENGDEEAQELWQWFRNESLKEFNRVYKLLDIEFDSLAGESFYSDKMNRVIELLEEKNLLKE
SKGARIVDLEEYKMPPALITKNDGSTLYMTRDLAAAIYRKETYDFDKCIYVVGSQQNLHFQQWFKVIELM
GYDWAKDLIHVGFGMVALEEGTMSTRKGRVVFLEDALNQAIDKTKEIILAKNPNAKNVDEISKQVGVGAV
VFQELSNSRIKDYTFSWERTLSFDGETGPYVQYTHARCCAVLRKAEVEVTSDIDYSLLADEDSAEVLRVI
ESFNKNILLALKKNEPHIVTRFMLDLAQAFNKFYHDNPILVENLEIRKARLALVLATKQTLENSLKLLGM
HAPERM
>gi|260686008|ref|YP_003217141.1| hypothetical protein CDR20291_0638 [Clostridium difficile R20291]
MNDELLKKVYTSSFSSASRALKDLTIINTKSLIDDKTQRCVYIDENRLRDELIYYRFYGEKIGNINFLNI
LLPLILSNTNIQKSEDEVIKLIKKYVIYFKKEELLFDYLLGSVVYNSIMHNLINNSKIEYVELLQSIKDK
IIGFSIELDKSDVVKFQMARIKAIQLIDKYIDLKSEDYDEESILLNVLNVLYDVYMEDRTVENEGINSIK
KSILSILGEDSKLNEDNIDFIFSMSEYVVKLRKYKIGVKAYNKSIDPRSLIRLEEGNTIIDPIFNQITVM
SKTFNDNILSIKINSKSGIYILKFKKV
>gi|260686009|ref|YP_003217142.1| putative adenosylcobamide-dependent radical SAM superfamily protein [Clostridium difficile R20291]
MKILLTTLNSKFIHTNLAIRYLKEFVRDLIEVNMKEYTINNDLDYILKDIYKNEYDIILFSTYIWNVGDI
VKLCDNLKKIRPNTKIALGGPEVSYDSYEAMKKYDFVDYILYGEGELIFRDLVLHLQGKMKINDVNGLVY
RQGNEIIVNKPMELLQDLDEIPSPYENLNPKEYENRIVYYESSRGCPFNCQYCLSSTIPGLRYFSLDRIK
SDLKALIDARVSQIKFIDRTFNANRKVAMEIMDFLMKNDNGYTTYHFEVTAYLIDDKMLEFLADCKEGLF
QFEIGVQSTNEKTLDAVGRRDDFKKLSHVVQTVASYRNIHQHLDLIAGLPYEDYKSFENSFNDVFNLGIE
HLQLGFLKMIKGTGMRKVADEHGFKYKDYAPYEFLYNNYISYEETLKLKDIEDILERYYNSKNFVLSMRY
IIGRFYKQSPFKFFEVFAKYFDENGYFDLAQGKNQLYKILMDFYNEKINIDNDVFNDILKYDYISLGKTS
NIPQFFNKLDVDDFKNRCHVFLQDNDNLSTYLPSFVDKPAKHIIKYVHFEPFRFNVVDLKNDINTEIREV
ENVVLFEYDDKKIFEKSKTHKVEI
>gi|260686010|ref|YP_003217143.1| hypothetical protein CDR20291_0640 [Clostridium difficile R20291]
MDFKIEKYLLKKAEELAFITIKHGGEFKLKSYKVPKGGLDVPIKNEVLVKGIKEKTAQDKLNSMSIADAM
IYIIGIDSKFKNNAEYEKFLNALSKDIDLDLKSYMGYMSRKYFEIGEHTDSLIYIKAFITMYPDDLDAMY
NYAIVCQEIAKQYQKDMDDKAMNAFLLEAMAKLEKVIDVDENFALGYYHLGYHYYNQGQYLKTKLTWEEA
LRLGLDADLVAEVQENLGKMDFKVQYEEGYTLVFQGKFKEGLEKLLPLEEEHMDWWNLLFMIALGYKGMG
EIEQAKMYLEKILIIKPNQVDTIVELGLCEAYKNNLDKAIEYFEQAAKIKEDPEILCNLGMAYLNNGDID
DATYYIERAYELNPQDEITIACLRELGINK
>gi|260686011|ref|YP_003217144.1| putative phosphate butyryltransferase [Clostridium difficile R20291]
MIKKLDDILEQLKGGEKIVLSVAAAHDKEVLMAIKDAVERNIITPILVGNEGKIREISKEIGFDLSGIKI
VDKDDIKECAEIAVKLVSSKEADFVMKGLLDTSVILKEVLNKDYGLRTDSLLSHVMVYELEKYHKLLITT
DGGMNIAPDYEQKAKILKNSIKAAKALGMETVKVACLAAKEKVNPKMQATVDADMLAKACKEGEFGENVI
VEGPLAFDLAVSKEASEIKGFKSEVSGDVDIILVPTIEVGNGIGKAFTYMADSKSAGIIMGAKAPIVLVS
RADSHESKLYSIAYGAIVAKNMK
>gi|260686012|ref|YP_003217145.1| putative bifunctional carbon monoxide dehydrogenase/acetyl-CoA synthase [Clostridium difficile R20291]
MDEKMLTIDLNSQKMIAKAREEGVETMYDRKEGFKAQCGFGLQGVCCRICGMGPCRISPKTPRGLCGADE
HTIVGRNFARMVAGGTAAHSDHARDIAHTLALADPNGNYKIRDEAKLITLAKEWDVETEGRDIYDVAHEV
AEIALMEFGKPFGTLRFIKNAPEPRQKIWKEYAIEPRAIDREIATIMHSTHIGCTGDIDSLIHMSLRTSM
ADGWGGSMIGTRLSDILFGTPVPRRTEANLAVLEENKVNIILHGHEPALSEMIVLASEEPDLVALAKEVG
ADGINLAGMCCTGNEITMRHGVKIAGDFHQQELAIITGAVEAVIVDVQCIFPALARVADCYHTKFVTTSP
KAKITGSTYIEFREEQALDDAKAIVKEAILNFKNRDKSKVLIPELKSGATVGYSVEAVVNQLDRVVNSHI
DPAGTVKPLTDCLKAGVLRGAAGVVGCNNAKGVSNEAHVTIMKELIKNDIIVVTTGCGASAAAKFGLMES
DAAEKYAGKGLATVCKLVGIPPVLHMGSCVDISRILDLVGAAANYLDMDMCDLPVVGIAPEWMSEKAVAI
GCYVVASGIDTYLGIMPPIAGSSRAVDILTSELKDKVGATFTVNTNPKELAATIIEDIEKKRVHFEALVE
EKMAEKAEA
>gi|260686013|ref|YP_003217146.1| putative carbon monoxide dehydrogenase accessory protein [Clostridium difficile R20291]
MKIAITGKGGVGKTTFSSMLSRMFAEDGYRVVAVDADPDANLALALGFPKEVYESIVPISEMKKLVSDRT
AASVGSFGKMFKMNPKVDDIPENFCKEYNGVRLLTLGTVDSGGTGCVCPEHVLLKRLCSHLILQNKDVVV
MDMEAGIEHLGRGTAQGVDAFIVVVEPGERSLQTYRKVKKLGHDIGVNKVFVVGNKIRNKEDEEFIIQNL
EDGESLGFIYYNQDVIDSDRANQSPYDSSETTKEQIKAIKDKLMSLKDK
>gi|260686014|ref|YP_003217147.1| formate--tetrahydrofolate ligase [Clostridium difficile R20291]
MGFKSDIEIAQEAKPQDIREVAKKLGLGEDDVELYGKYKAKVDYNLLKRETGKKAKLILTTAINPTPAGE
GKTTTTIGVADAFAKLDKNVLVALREPSLGPVFGVKGGAAGGGYAQVVPMEDINLHFTGDFHAIGAANNL
LAAMLDNHIHQGNALRIDPKKITWRRCVDMNDRQLRNIVDGMGKKGDGAVRQDGFDITVASEIMAAFCLA
SDISDLKERLGNIIVGYSYEGEPVTARQLKANGAMAALLKDALKPNLVQTLEGTPSFVHGGPFANIAHGC
NSVIATRMAMHFADYVITEAGFGADLGAEKFLDIKCRMANLKPDAVIIVATVRALKYNGGVAKADLNNEN
LEALEKGLPNLLKHVENITQVYGLPAVVAINRFPLDTEAELKLVEDKCKELGVNVALSEVWAKGGEGGIA
VAKEVLRLLDEEENNFRFCYEDDLSIKDKINAIATKIYGADGVDYTPEADKEIANLEKLGFTKVPVCMAK
TQYSLTDDQTKLGRPTGFRITVRQATISAGAGFIVALTGEIMKMPGLPKVPAAEKIDVDENGVIAGLF
>gi|260686015|ref|YP_003217148.1| methenyltetrahydrofolate cyclohydrolase [Clostridium difficile R20291]
MKIADKTCVDFVEVLSSKEAVPGGGGAAALVGAIGMALGSMVCNLTIGKKKYAEYEESVKEILSKAGKLE
KDLLKMIDDDAECFLPLSKAYGLPKETEEEKRIKAETMEKALKVACEVPLNIVRVCYEAIKLHEDLVDKG
SRLAISDVGVGVQCLRAAILGGQLNVVININSIQDKEYVNKVKIEVDKLVEDGVKICDEVYAKVEKALGK
>gi|260686016|ref|YP_003217149.1| putative FolD bifunctional protein [includes: methylenetetrahydrofolate dehydrogenase; methenyltetrahydrofolate cyclohydrolase] [Clostridium difficile R20291]
MEGMSTKGQIIKGKPVADKISEELIKEVDLLVKEGINPKLTIVRVGARSDDLSYERGALKRCQNIGITTE
VLELAEDITQEEYIDVLKRVNDDKNVNGILCFRPLPKHLNEEVIKYVIAPEKDVDCFSPINSAKVMEGDK
SGFPPCTPTAVVEILKHYNVDLKGSKVTVLGRSMVVGKPVSMLLLSEHATVTICHSKTKNLSGVAAEADV
LIAAIGRAKMVDESFVKDGAVVIDVGINVDEEGNLCGDVDTNAVLDKVSMITPVPAGVGSVTTSILAKHV
VKACKLQNNK
>gi|260686017|ref|YP_003217150.1| hypothetical protein CDR20291_0648 [Clostridium difficile R20291]
MIISENKPLEEVLGYLKDFDKLVLVGCNQCAATCKSGGEEEVLKMKETLEGEGKKILGYVMLDPACNLLK
SKKDLKALKEETKEADAVLSLACGDGTQTIVKNLKDKPVYPANNTLFIGEVQRVGEYEEACKACGDCELG
WTGGICPVTMCAKGLMNGACGGAKNGKCEVNSENDCAWIKIYERLEAIGQLDNLAEIRPPKDYSKQNNPR
SLSAKKKKEAAANS
>gi|260686018|ref|YP_003217151.1| putative methylenetetrahydrofolate reductase [Clostridium difficile R20291]
MSLLRETLESGKFAVTTEMAPPKGTDLSHLIECAKPLVGRVHAANVTDFQSAVMRATSLATCKLLKDAGL
EPVIQITGRDRNRIAIQGEMLSAGVFGINNLLALTGDHTSVGDHPQAKGVFDLDSVGILQTAETLMAGTD
MAGNKLKGSPDFYLGASVTPEYSPIEVQLLKMQKKIKAGAKFFQTQALYDINTMRKFRELTRDMDCKVLA
GIVPLKSPGMAKFMTANVPGIFVPDEQIERLRAAGKENWVSEGIKMAGELIKQLKEEDLCDGVHIMAIGA
EENIPAILDAAGL
>gi|260686019|ref|YP_003217152.1| putative carbon monoxide dehydrogenase/acetyl-CoA synthase complex, dihydrolipoyl dehydrogenase subunit [Clostridium difficile R20291]
MKIVVVGGGPGGYVAAIKASMLGADVTVIEKRRVGGTCLNAGCIPTKALLASSGVLNTVKEAKDFGIEID
GTVKPNFTAIMERKNKVVNQLISGIEFLFEKRGVNLVNGFGKLIDKNTIEVTKDDGTVETIKADKIILAN
GSVPVVPRMFPYDGKVVITSDEVLGLEEIPESMLIVGGGVIGCEIGQFFRALGTEVTIVEMVDQILLNED
KDVAKQLLRQFKKDKIKVITGIGVQTCEVVDGKAVATLSNGKVIEAQYALVCVGRRPNLDNSGVEDIGIE
MERGKVVVNEHLETNVEGIYAIGDIIDTPFLAHVASKEGIVAVENALGKTKVVDYRAIPRCVYTEPEVAG
VGKTEKQLEAEGVEYNVGQFDFRGLGKAQAIGHFQGFVKVIADKETDKIIGAAVVGPHATDLLTELSLAV
HLGLTVEQVGDAIHPHPSLSEGLMEALHDVHGECVHSVPKL
>gi|260686020|ref|YP_003217153.1| putative carbon monoxide dehydrogenase/acetyl-CoA synthase complex, nickel-inserting subunit [Clostridium difficile R20291]
MGYNIAVAGKGGTGKTSLTGLLIDYLVKDKKGPVLVVDADANANINEVLGIEVEATIGEIREEVNQREKL
GNAFPGGMTKAQYLQFRLNSIIEEGEGYDLLVMGRSEGEGCYCFVNGILREQVNKISGHYKYLVMDNEAG
MEHLSRKVTRHVDTLLLVSDCSRRSIQAVARIRDLAEELKLSVGRILLIVNKVPNGVMNDGVKEEIEKHN
LELIGVVPMDELIYEYDSTGIPLVNLPEDSKSKVAMKEIFAKLELK
>gi|260686021|ref|YP_003217154.1| putative carbon monoxide dehydrogenase/acetyl-CoA synthase complex, small subunit [Clostridium difficile R20291]
MAFKMSTQKYSGKISEVEVGIGEKAIKLGGENVLPFYSFDGEVGNSPKIGIQISDVYPESWTDSYKELYK
DVANCPVEWAKYVEANTQADFICLKFDGSDPNGLDKSVDECADVAKAVIEAIKLPLVVAGSGNHEKDGKL
FEKLAQTLDGHNCLFMSAVEDNYKGVGASAGMAYAHKVGAESSVDINLAKQLNVLLTQLGVKGENIVMNV
GCSAVGYGYEYVASTMDRIRLAAFGQNDKTLQMPIITPVAFEVGHVKEAIAPIEDEPDWGCPEERTIAME
VSTAASVLVGGSNAVILRHPKSIETIKELVNALA
>gi|260686022|ref|YP_003217155.1| putative carbon monoxide dehydrogenase/acetyl-CoA synthase complex, alpha subunit [Clostridium difficile R20291]
MALKALDIFKLTPKKNCKDCGFPTCMAFSMKVASGAVEVGKCPHMSDDAIAKLSEATAPLMKALKVGAGA
SEYELGGETVLFRHEKTLVSRNRYAVSFCTCMSDEAVDAKIANMKKVDYVRIGEQMKVEMAVLEYCGDKD
AYLKLIDKIKGSGLEVAYILACDDAQVVKEAVEVLKDARPMVYGATKENYKDMIEVVKGASLPLGVKAGS
LEELYETVELIQAAGYKELVLDVTGENIKDTYTNAIQVRRTALKEQDRTFGYPSIVFANRLSNSNPMMEV
ALSSIFTIKYGSIIVIDDISYAKALPLFALRQNIYTDPQRPMRVEPKIYPINNPDENSPVLVTVDFALTY
FIVAGDIERSKVPVWLVIPDAGGYSVLTSWAAGKFGGNSISAFIKESKVEEVTNCKDLIIPGKVAVLKGD
IEDNLPGWNVVIGPEESMELPKFLKGYQEKACQTN
>gi|260686023|ref|YP_003217156.1| putative carbon monoxide dehydrogenase/acetyl-CoA synthase complex, methyltransferase subunit [Clostridium difficile R20291]
MEKFMIIGERIHCISPSIRKALAERDPAPILKRAKEQLEAGAHYIDFNIGPAERDGEEIMTWGIKLLQSE
FNNVPIALDTANKKAIEAGLKVYDRTNAKPIINSADAGSRFDLIDIAAEYEAMVIGLCAKEGIPRDNDER
MAYCQEILEKGLMLGMEPTDILFDPLCLVIKGMQEKQVEVLEAIKMMTEMGLLTTGGLSNVSNGCPKHVR
PVLDSAFLAMAMANGFSSAIMNPCDPELMKTVKSCDIINGASLYADSFLELNEGGFAF
>gi|260686024|ref|YP_003217157.1| putative carbon monoxide dehydrogenase/acetyl-CoA synthase complex, beta subunit [Clostridium difficile R20291]
MNLYNIIFTGSEQALGAAQAMLAEAIEKNGKEHKVAFPDTAYSLPCIYAATGQKMNTLGDLEGALEVVKS
LINRTHLLEHAFNAGLATALAAEVIEALKYSTMDAPYSEPCAGHITDPIIRSLGVPLVTGDIPGVAVVLG
ECPDAESAAKVIKDYQSKGLLTFLVGKVIDQAIEAGVKMGLELRVIPLGYDVTSVIHVVSVAVRAALIFG
GLTPGDLNGLLEYTANRVPAFVNAFGPLSELVVSAGAGAIALGFPVITDQTVLEVPMNLLTQKDYDKIVA
TSLEARGIKIKVTEIPIPVSFAAAFEGERIRKSDMFAEFGGNRTEAWELVVKKEATEVEDHKIEIIGPNI
DEVDADGVLRLPLAVIVKIAGKNMQEDFEPVLERRFHYFLNYIEGVMHVGQRDMAWVRISKDAFDKGFRL
EHIGEVLYAKMLDEFESVVDKCEITIITDAEKVSELKGEAIAKYNARDERLASLVDESVDTFYSCNLCQS
FAPAHVCVVTPERLGLCGAVSWLDAKATKELDPTGPCQPIEKGECLDDRTGVWNSVNETVNQISQGAVES
VTLYSILEDPMTSCGCFECICGIMPEANGFVVVNREFASVTPVGMTFGELASMTGGGVQTPGFMGHGRHF
ISSKKFAYAEGGPERIVWMPKELKDYVADKLNATVKEMTGIENFCDMVCDETIADDSEGVLAFLEEKGHP
ALAMESVM
>gi|260686025|ref|YP_003217158.1| putative glycine cleavage system H protein [Clostridium difficile R20291]
MKLLPELKYSKDHEWVKVIDGDVVYIGITDYAQDQLGEILFVETPEVEDTVTKGVDFGVVESSKVASDLI
SPVNGEVLEVNEKLEDEPECINEDPYENWILKVKLADVAELDTLLSDKEYEAGLE
>gi|260686026|ref|YP_003217159.1| putative iron-sulfur protein [Clostridium difficile R20291]
MSARKFSYTFLLSYIEQIGRDNMIKVSFTPNNKEVYCNEGDILLEVARNADIFIDAPCNGNVSCGKCKVK
LLNGKVDTEKTRHITDDEWEQGYILACCTKVISDIEIEVPSKVSSSMHGMKIEGSNKKEDREIFERAKKI
IEEHNLQFKTNIKKKYIEMEEPNLDDNISDVDRLERYVRNSLGYNEIDFRLDILRKMPTVFRKSDFKVTI
TYVQKQKKLTIINIEQGNKENSLYGVAIDIGTTSVVVCLVDLYSKEVVDKASSGNAQIKYGADVINRIIY
STKKNGLETLHKAIVEETINPLLKTIYERNGIDKEDVVTLVAAGNTTMTSLFLGVYTDFLRQEPYIPPFL
KSPKLMGENVGLFVNDSAYVYLAPSVASYVGGDITAGVLSAGIWSSEENVLFIDLGTNGEIVFGNKDYMM
SCACSAGPAFEGGGISCGMRASAGAIEKVIIDKETLEPTLKIIDECAPVGICGSGIIDLICQMITKGVID
RRGKIYRDLDNKRVRFNEHEIGEYVLAFKEEFDLENDIVVNEVDIDNFIRAKGAIYSGAYTLVDSLGMDF
SILDRVYIAGGIGNNLDIENSIIIGLLPDIDREKFTYIGNSSLVGSYLALISKDAKNKLEEIGNQITYVE
LSVYPSYMDEFISACFLPHTNIEQFPTAKKLLEE
>gi|260686027|ref|YP_003217160.1| putative radical SAM superfamily protein [Clostridium difficile R20291]
MNKNLSEKMKIAFDIKLKNFGNKIEFAYPNQTLALSTTSNQCSLKCAHCNGHYLNNMVPIEEYEEKVQSR
NITSFLLSGGCSYEGDVPINTHINTIKNLKEKGYRLNAHLGLMDKDSIVELCKYLDIVSFDLVFDDETIR
EVYKMKKSKEDYIEVYNTIQEHTEVAPHICIGLKGGQIKGEYEIIEYLQKNPPNKLTFIVLIPTKGTEYE
NVEPPELEGVADILCEARINLPDTEINLGCMRPRGVYRKELDQLSIMCGVNRIVLPSRSAKNKAIEMNMT
INECKECCVL
>gi|260686028|ref|YP_003217161.1| putative radical SAM superfamily protein [Clostridium difficile R20291]
MLRFMIRLSVGTAIELGILNKKSDIPPTTAYIMIGEKCINKCSFCSQSIESSTRKDKLSRVIWPEFSKEE
ILDALKAYKGKNIKRICIQSMASEEAHNSVLDFINYISGKIDMPISLSAKLENDEQIKKFFSVGVDKIGI
AIDASNKELYEKIKGNNYDEKLKFITEMSKSYPNKISTHIIVGMGESHEDIYNLYIYLKENDVTISLFAF
TPVRGTKMEKINQPSIESYRRVQLMSYMINKGYPKEYFKFKNGYLNSIKLDNDILKDINKGYPFEIRGCK
DCNRPYYNERPGSTIYNYSRPLNQSEIDLAIREINL
>gi|260686029|ref|YP_003217162.1| putative biotin/lipoate-protein ligase [Clostridium difficile R20291]
MNQWRVIHNKSYEGAMNMAIDEAIFTAYKKGHNKPTLRFYTWEPACLSIGYFQKLEDEIDLDKCRCMNID
YTRRITGGRAVLHDNELTYSIIIGEDNPLIDKSINLSYRYISEGLVKGLNLSGIETDNLNRGERISRENL
SAACFNAHASYEVTINNKKVIGSAQSRKDGVLLQHGSIILDFDVEKLFKLIKTKTPELKERAMKFTAKKA
SGIENEIGRKIDIDILQKNIVKGLAEQFNVEFVEGDLTDYEKQLVKELYEKYKNEEYNKKR
>gi|260686030|ref|YP_003217163.1| hypothetical protein CDR20291_0661 [Clostridium difficile R20291]
MCESSAFICKSNNELEKVMENVVNIDPCDGKIYLTDLLGEQKIIDGIIKEIRLMDHKIIIQEN
>gi|260686031|ref|YP_003217164.1| hypothetical protein CDR20291_0662 [Clostridium difficile R20291]
MIIAVIDGMGGGIGAQIVSSLREELPTYVEIYALGTNSIATSSMMKAHANKGATGENAIVVSAKKANIIV
APISVIIPNSMMGEVTCNISEAIADSEALKILLPIMPENVELVGLEGKPLALLVKDSVNLIKKEFNIK
>gi|260686032|ref|YP_003217165.1| hypothetical protein CDR20291_0663 [Clostridium difficile R20291]
MIFDKEIVRYHHGHHDHDHCHEHTHGDICHEHPHDHAHDHDHEHSHEESSESKDEKTLKILLVHWINHNE
THEEGFREWVEKARAIGKEETAKSIEKAIEYMEEANKMLLEAKKHM
>gi|260686033|ref|YP_003217166.1| putative histidinol phosphatase [Clostridium difficile R20291]
MKDGHIHSPYCPHGSKDDFEKYVQRAMDVGITEMTFTEHFPYANGFRDPAPENDSCMSIEDLPKYFNDVK
KLKEKYEGKIKINVGSEVDFIEGYEEGIKENLNKYGKELEDSLLSVHIIKIDDDYYCVDYSVEEFQNLID
KLGSIEAVYNKYYETLIKAVNSDLGIHKPKRIGHLNLVRKFNQVFPYDYKGNTILEDLIKLIKEKGYELD
YNVSGNRKEYCKEPYIDGYLLELVKKYDIPLVLGSDSHCAEEINKYDII
>gi|260686034|ref|YP_003217167.1| hypothetical protein CDR20291_0665 [Clostridium difficile R20291]
MKKRLIIMILSVVLVLSSILTIFAYSNIKYNNNKLIYSNMIDKKTQNSVKEILKENKINEKDIDTFIKAV
NNYNKLQVKILQNNINISKSGYSSINAKQVPYNLEKLQDNWVKKFPDYMDVNCRITAFRLFKDFINSNKK
FTGDSIDLNVDLDTIMNNKDAKFSTKDVEKFINFFSAIPAKDTDDTIKIAEQIKNEWKKRKISFKNNKNI
SIINGFLRYPETKNVFIGHTGICIKTKNGILFLEKYGVTSPYQVTKFKNKKGVKNYMFNRLKMSEGEIEL
PDPIIMENDKLMK
>gi|260686035|ref|YP_003217168.1| hypothetical protein CDR20291_0666 [Clostridium difficile R20291]
MKVKKFKSGIVMALTVMAIGASLTNVSAMELNKSKEFETKYNEMKRDFQEDYGKEDKFNITLDDEFTKEE
VNGAKGIIKTTNKMNNEVVVLNYFDEMKSGIEFELKAKAEKNAILRDEFQQGYGKEDKFKVVLDDEFTKE
EVNGAKGIIKTTDKETGEVIVYNYFDELEK
>gi|260686036|ref|YP_003217169.1| putative aminotransferase [Clostridium difficile R20291]
MKKTYLFSPGPVMVTDKVRNSLLHYDICHRGNEFMDLFKDTQQKINKLYNATSNYYSLIVSGSGTSVNEC
VLSSIFDKEDAVLLVSNGVFGERLEEILFTYNVKTYKPNFEWAEYPDLDILEKYIIENSDIKVIAMVFHE
TSSGMINPVPELGKLAKKYNKIFFVDAISASAGEYIDVEEFNIDIITGVGGKALGAFPGSAYLCAKESIL
QNIKENQCKNVYLNLYKHYKVAKSSSQTPNTPNVTLIFALNEALTEFLEDDSKIERYKECSAILRNGMEE
LGLTFLLPDKYMSNTVTSVFLPKEINVNEFILGLERESGYVVYPGKGKFLDANIFQVANMGEIYPEDCYK
FLDILKSKLEIKKVI
>gi|260686037|ref|YP_003217170.1| glycerol kinase [Clostridium difficile R20291]
MKYVLAIDQGTTGTRAVLINEKSEFVFSDYMEHTQIYPQSGYVEHDPIEIWNNTKTVSNNVLQQAFESGI
NESDIKGIGIDNQGETVMLWDKNTGKPLYNAIVWQCRRTYDYVENLKNIPGLENKIIDKTGLIIDPYFSG
TKIKWVIDNVKGVKEKIKNGEVLAGTLDSWLIWKMTGGKSFLTDVSTAARTMLFNIRDMDWDRELLDIIG
VPRSILADIMPTSGDFGTTDKEAFCGVSIKITASMVDQPAALFGNGCFEPGMVKNTYGTGCFLYMNIGEE
LNIAGNGILTTVAWKIGDKVTYAYDGGVYIAGAAIQWLRDGIGVIKNYSETDDMANSISSTGGVYFVPAF
AGIAAPYWDQYARGTMVGITGSTKKEHIVRATLESVALQVKDVVDSMNLASGKEIKMLRVDGGITKNNFT
MQFQSDILDIPIEIAENPETTVLGVGYMAGLSCGVWNSIDEIRSEFTISKKYIPNMTKQKREEILLGWNQ
AVKRAMNWENDTKKVCAN
>gi|260686038|ref|YP_003217171.1| putative ethanolamine transporter [Clostridium difficile R20291]
MPFDKIILYIMAVGVLLGALDRIIGNKFGLGEQFEEGFNSMGPLALGMVGIVCLAPVISDVLGPIIIPIF
NLCGADPSMFATILANDMGGYPLAMELAHNKEAGMLAGLVVSSMLGCTLVFSIPVGLGLIEYEDRPFFAK
GLLIGLITIPFGGIIGGLIAGFNLSMVIINMIPVIILAVILAVGLKFNSTLMINGSLVFGKFISILITIG
LGAAAFQEITGIVLIKGMTPIREGIQVIGSIAIVLLGTFPILHLLVKVLNKPLTIVGGKLGMDATSAAGL
VFTLANSIPVYKMMKDMSPKGKVVNTAWLVCATAALGDHLGFTAGVVPEMITPVVIGKLVGGVLAIALAI
LMTKDLTLEEEQSIKMKKDAV
>gi|260686039|ref|YP_003217172.1| DeoR-family transcriptional regulator [Clostridium difficile R20291]
MLPQERYEKILSILKSDNIIKINDIVQMFDISIETARRDLAHMESIGLLKRVYGGAIPVIASSVELNYVK
RKKINSNDKKQIAIKCSEFINTNDTIFMDTGTTVLEVSKNLKDKKNLTVITNSILVANELMNTNIKVYVL
GGYLRETEGSFSGPLTLSAIEQFNVDKAILGAGGITLENGISDYHLEEALVRKKMIERSRKSIVVVEPPK
FGINSFASVAPIEHIDTIITSASIDHNIIIEFSQKGIPLVIADN
>gi|260686040|ref|YP_003217173.1| putative chemotaxis protein [Clostridium difficile R20291]
MTTLIFFIVGIASLVVAFVIDGGHIGVLFVFSSALVVFGGTIGAVGASTPFPVFKKSIKIMLLAFKNKKP
NNIENIIYFKEIATKARKEGLLSVDKEISENDELDPFIRKGLELMVDGVDAVTIRNILESQIQITSKRHK
EGIAIFDSAGGYAPTLGIIGTVMGLVHILGNLSSNPDALGPQISVAFLATLYGVGSANLIWLPIASKLKA
INQQEISERLLVIEAILSILEGDNSNLMTEKLKIFLNSKELIELEEIGGRAE
>gi|260686041|ref|YP_003217174.1| putative chemotaxis protein [Clostridium difficile R20291]
MFMLYDEDEKEENNERWLLTYSDLITLLMIFFVIMYSMSNVDAEKYKQLSQSLNSAFGGSSGVIEGGNSK
IEPVVEPGSNDLDSLQNAKFKKVGEEIQKYLNENGMANSVSLRVQDRGLVISLKDTILFDTGKAVVKDNS
RDKIIQIGKMLNEMNSYMRVEGHTDNMSIKNSEFKSNWDLSVMRATNVVQLLIDNAGIAPDKLSAVGYGE
FRPIAENSSEEGRSKNRRVDIVLVDSKYDNVENVSKDK
>gi|260686042|ref|YP_003217175.1| hypothetical protein CDR20291_0674 [Clostridium difficile R20291]
MGNKNKNTKYKDKTRERYNKKVENLNKEKLNKDNKQSKKVDKIDDIINKSSIVLCVLLVVFSLLYLFKLV
QLNIIMILLVITVAIQQGLVSFGAFRNKNYVKALFSIFVIVCFLIAFKYVVNPV
>gi|260686043|ref|YP_003217176.1| putative lipoprotein [Clostridium difficile R20291]
MNRCKFAKLIITSMIVLLLTGCSLKKEDNYKLDPENPTSIQIWHYYNGQQKMAFDKLVKEFNDTIGAEKG
IIVEAFSQGNVVDLSEKVLDSANKKVGSEDVPNIFAAYSDTAYEMDKLGLLVDMDKYISKEELNEYIDEY
VEEGRINSKDEFKLFPIAKSTEILMLNKTDWDKFAKATNSNINDIKTIEGLVETSKKYYEWTDSLTKEPN
DGKAFFGRDALANYIIIGSKQLGVEIFSVKDGKVTLNIEEKVMKKLWDNFYVPYINGYFASYGKFRSDDA
KTGDILALVGSSSGAAYFPDRVMLNDNESYNIETSVFQAPRFKGEGKYAVQQGAGMAVTKSTKEEEYASV
EFLKWFTDKEPNIKFSIASGYLPVKKKTNDLNVIKEVMKKDNLSLSDKVEGSIASSIEQINSCNLYTNKA
FDGGTKARQILEYSMLDKAKEDSNKINELVKSGTSKKDAVAQFNNDKNFETWFESFKAELENAIKK
>gi|260686044|ref|YP_003217177.1| putative signaling protein [Clostridium difficile R20291]
MENNLRKNNSIMKKMIFPLIIVMLIQTSLFCATILWGGTIKKLNDNSFDILNERVINRKNYIQNEMLQRW
SNTSETEATINSSVKKILNEKNALIEDVGNNEEINKDIIKSISNDLIYLLRKNSVTGAFIILNDKNINDK
PIDSKGEISRTGLYIRDLDPKFNPNDNSDLLIERGSSDIARSFGISMDSYWEPKFSFKSENEQEGDDFFY
KPFRAAIDNPNVSSSNLGYWGSKFLLTNAGDRLMTYTVPLIYEDGTVYGVLGIDLSVNYLRELLPYSEIN
GNKKGNYILGVDRNNDMAFENVISNGYSLKEKFWDGLHSNLEQKESYKNIYKIKNKDNECGNGNIYASVQ
YLDLYNSNTPFENERWALLGIIEEKSLLSFSKRIEKLVIISIAISLLIGLIGIYIASRLFTKPIVLLANK
VRNSNPSKPVNLDKINISEIDELSSAIELLSANVADSSSKLSQIIEMVDMPIGAFELYKNAENVFCTKDK
KLKWIRMNIFEDELKVLGVVVDVTKEFIEKRKIEYERDFDILTNLLNRRAFHSQIQEKFKNKDELKIAAF
IMWDLDNLKYINDTYGHDAGDEYIRCAADILKKFISWNGIVSRLSGDEFYVFIYGYESKDSIRDIINSVK
KQMNNTLLKLHDGTEFKIRASAGISWYPDDSTNYDELMRYADFAMYQIKNTIKGEVSEFDINIYNKDSFL
LSNREELNKLIDGQLVEYAFQPIVDCKGKVFAYEALMRPKIKTFSSPIDVIRLARSQSKLYQIERITWFK
ALKSFKKYKEKFGDCKLFLNSIPNNNLSKVDFEEIEDLYGEYLNRVVLEITENDKINEDFIEKKKAYIDH
WNIEIALDDFGTGYNGDAVLLYIMPDYVKIDMSIVRGIDKDENRQKILKNLISYSNERNIKVISEGVETK
GEMETLINLGVDYMQGYYISKPSFIPEDISDKIKKELKICHENRNDVV
>gi|260686045|ref|YP_003217178.1| putative ATP-dependent DNA helicase [Clostridium difficile R20291]
MVELIITTNIDIRKLNENQLEAVEHIDGPCMILAGPGSGKTRVITYRIANMVVNKNIAPTRILAISFTKA
SSIEMKNRALNLSDDIRLNKVTYGTFHSVFFKILRYFERYNLDSIFDEKSKRMTIKAILKSLNIENADDD
ENIGQVINEISYVKNELMDKNEFNSEVLTKDEFLKVYNLYEEQKSKVNKIDFDDMLIRTYYLLLNNKSAL
EMVRNVYKYILIDEFQDINKVQFEVLKLICSPLNNIFAVGDEDQSIYGFRGARPDFLLEFEQYFNNTKKI
ILDINYRSKSEIVYTANRLIDKNKNRYEKVIKCSQGDGGSVTYISPHDSEEEALYIAKEIIDEIQKDYVE
YSDFAVIYRTNIQSRALVDVFMDMRIPFVVKDSVITIYDHWASQDILAYLRIGINPKSNKDWLRIINKPF
RYISKDSINMVKDEKDFITALINKCNLHPKQVKTINDLEIDLSYLNTLNPKNAISYIRTSLDYDRYVLDY
CSNRKIKTNGLVEILNELESSATNFNTVTEFLEHIDRVKTELTENNKNKQTEGVIFTTMHSAKGLEFRNV
YIIGVNEGTIPHEKSYDICKEEKKEEQLEEERRLMYVAITRAEEKLCISSTLNKYGKKVDKSLFINDIKS
PTKKEIDSIGVGDKVYHKKFHEGEIIKKDGIMFTIKFKDRERILDLKTCLLKNIIYTI
>gi|260686046|ref|YP_003217179.1| amino acid ABC transporter, substrate-binding protein [Clostridium difficile R20291]
MKVFKKLLSLGLVLGLTLSLVGCSGGGEKTKLEQIKDNGKLVVGTSAEFPPFEFHKVVDGKDSIKGFDIM
LAEEFAKELGVKVEIKDMSFDGLIGALNADQVDIVLAGMSPTPEREKSVDFSELYYLSRNAVIVKDADID
KVKTEDDLKKLRVGVQAGSIQEEYVVNTLKMTTTKSLKAIPDLITELKNGNIDAVVTNEAVSLINVKKYD
GIKMANTEVGKDVTEGMAAAIKKSDNNKDFIELLNKKIKELQDGKKIEEFLNEASTEAASN
>gi|260686047|ref|YP_003217180.1| amino acid ABC transporter, permease protein [Clostridium difficile R20291]
MSLDFSFLSRFGTSFLEGTGVTVSISLVALCFGFIIGIIICMAKISKSKVLRAISSIYIEVLRGTPLLVQ
IYIVWFGLPQLGIRFPMLFGIPSEFIASAFALSVNSGAYVAEILRSGIQSVDNGQMEASRSLGLNYWSTM
RYIIIPQAIKNILPSLANEFITLVKESSIISVIGVVEIMRTADIVKNAAFRALEPLIVAAAIYFVITFTL
SRLVGLLEKKLSVSN
>gi|260686048|ref|YP_003217181.1| amino acid ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MITIKNLSKSFGDLNVLKNIDLEIAKGEIMVIVGPSGSGKSTLLRCMNLLEIPTGGEIIFEGKNLVDKKT
NIDEVRQNIGMVFQNFNLFPHKTILDNITLAPIKLKKMTKEEAEKKAEILLSRVGLLDKKDSYPSQLSGG
QKQRIAIARALAMEPDMMLFDEPTSALDPEMVNEVLDVIKELAKEGMTMAIVTHEMGFAKEVADRVIFID
GGSILEDNTPEEVFGNPKHERTKAFLAKVL
>gi|260686049|ref|YP_003217182.1| putative cysteine desulfurase [Clostridium difficile R20291]
MEIYLDNSATTKPYQEVIDKMVYALNTEYGNPSSVHRKGVEVEKAIKEVRQDIAKSLGAKEKEIYFTSGG
TECNNTIIRGITSLNKKRKNHIISTNIEHPSVLNTLKDLEEDGFEVTYLEVGKDGKINIEDLKNAIKSTT
CLVSMMHVNNEIGTIQPIGEVGKYLKGLKEKIYFHVDAIQSYGKINFRPSKYNIDFMSVSAHKFHGPKGI
GFMYIKENNRLKPMLTGGGQEIGIRSGTENVPGIYGLGEAVRILNKDLDVVISKVNNLKNILKNEIIDNI
EDIKINSPEDGVCHILNVSFRGTKGEVLLHYLEQKGIYVSTGSACSSKKKGSYVLNAIGLTNEEINGTIR
FSLSDMNTEEEMLEAVKVLKESICDLRSIMKRK
>gi|260686050|ref|YP_003217183.1| putative thiamine biosynthesis protein [Clostridium difficile R20291]
MVYNILIVKYGEIGVKGKNRYIFENRLIRNIRNMLKPIGRFNVYKEYGRIYVDLEDYDYEEVIEEVRKVF
GIVGVCPGVRAKKDYDTLKEIALKMLEEKIEAGYKTFKVESRRGDKSFGLTSQEMSMDIGGYLLSKVGDR
INVDVRNPEVKIKCEYREFHTMVYSDTIPGYGGLPLGTNGRAMSLLSGGIDSPVATWMVAKRGMEVEAVH
FHSYPFTSERSQEKVKDLAKILAKYCGRVRLHKVNILEIQKAIGENCNEEEATILSRRFMMRIAQRLSEK
RHCDALITGESIGQVASQTIQGLTCTNAVVDLPVFRPLIAMDKSDIVDIAKKIGTFETSIVPEEDCCSVF
SPRKPVTKPRLEKIEKSETALDIEKLVQDAIDKIEVEDIEF
>gi|260686051|ref|YP_003217184.1| fimbrial protein (pilin) [Clostridium difficile R20291]
MGMIIMNKKGFTLIELLVVISIIGILVIVAVPALFRNIEKSKAVTCLSNRENIKTQIVIAMAEESSKDKN
EVIKEVLENKDGKYFETEPKCKSGGIYSATFDDGYDGITGIESIAKVYVTCTKHPDGIEMARDIHQSMKD
LIASFAQDPSIIPGASKGNDDFRKYLLDNKYKNGWPTIPDEFKAKYGLSKDTLYIQPYAYNPTKSDATVV
VFANNKTGGNWYTSLVYDYDEGRWYKGKNGISVAGRSWDVDTDSVKSVKTEIHSKEGWGPLN
>gi|260686052|ref|YP_003217185.1| putative reductase [Clostridium difficile R20291]
MNNNFQDNQTINLIQSRRSIRKFTTEQISDEQVNTLLHCAFAAPSGCNKQPWHITVVQDQKLLKEISDDT
LSRIHEVSNVEINKNFKLFYGAPTVLFISYDESSSWAPYDIGILTGNITTAAQALGLGSCIIGMVRGLFT
PVEQGDIEGLVSVLDKEDVKESESIKMKFDTNKKYRELLDIPEGYSVPFGIAVGIPDGNLPNAREVVYKV
SRV
>gi|260686053|ref|YP_003217186.1| putative signaling protein [Clostridium difficile R20291]
MREESNSLSLDHIEIFFELLSQSTEDYIFFWDINRNKFKISSAIFDEFNLSKEIESDLVNCWSKIVYPDD
VQIWKDDIQELLHGKKGEHNLEYRLINKYEEIVWISCRGKVYVSDDPKTIFLVGRIKNIGEKNKFDSITG
TWNREQFEHRMNYLIKEKIYKNGAMFIMDIDNFKNINEKYGHSYGDKVLRAIATEVLEYLPKDVRLYRLD
GDEFAFFYPMCTKETIEKIYEKIQMYTNTQHEIESNKYYCTVTAGVAMYPEDGDNYLDLFKHADIALDIA
KISGKNRIKFFSQELYENKLKVISMQQKLRECVENNFNDFELFFQPQVNAVTKEVIGAEVLLRWHSSTYG
EVSPVEFIPILEQSNLIIPVGKWIIKEAVKQCKEWHKINPDFKISVNVSYIQLKEDFFRDFIVECLVEYQ
LRPEFLILELTENCWIPDINLLNDKFISLKGIGVYIAIDDFGTGYSSLNYLKELSVNIIKIERSFVKNIT
YNSYEYTFLEYIIKLAHIINLKVCVEGIESYEEYDIVKSLGVDIIQGFLFGRPVSASEFYKFQLSK
>gi|260686054|ref|YP_003217187.1| pyruvate formate-lyase activating enzyme [Clostridium difficile R20291]
MIKGKIHSIETFGTVDGPGIRYILFFQGCPLRCKYCHNRDTWDIKSGKEYTVDEIITDALKYTSFMKFSG
GGITASGGESTLQPEFLSELFKKAKENDIHTCLDTSGFVDIETIDPVLDNTDLVLLDLKHMVEEKSIDLT
GVGMDKALKLARHLESRNIPVWIRHVLVPGITDDIDNLEKLGQFVATLKNVERFELLPYHSMGIHKWESL
GIDYELKDVPDATKEDVQKASEIISKFGVKVYNS
>gi|260686055|ref|YP_003217188.1| formate acetyltransferase [Clostridium difficile R20291]
MNAWQGFKTGRWTKEINVREFIQLNYSPYEGNDSFLAGATENTKKLWDEAMVLFKKERENGGTLDVDTKT
VSGIAAYAPGYLDKELETIVGLQTDAPLKRAVMPYGGIKMVENSCEAFGYELDPEIKDIFTKYRKTHNQG
VFDVYTPEMRAARKSGIITGLPDAYGRGRIIGDYRRVALYGVDALIEDKNEQKKSLEVSCMDEEVIRLRE
EITEQISALNELKKMAESYGFDISKPATNSKEAVQWLYFGYLGAVKDQNGAAMSLGRTSTFLDIYFERDL
KAGIVTEEELQEYMDHFVMKLRMVKFLRTPDYNNLFSGDPTWVTECIGGMGIDGRTLVTKNSFRMLNTLY
TLGPSPEPNLTVLWSTKLPQGFKDFCSKVSIDTSSVQYENDDLMRAYWGDDYGIACCVSAMRIGKQMQFF
GARVNLAKTLLYAINGGVDEKSGVQVGPRFEPITSEYLDYDEVMSKFEPFTDWLATLYVNTLNVIHYMHD
KYSYEALEMALHDRDIFRTMACGMAGLSVCADSLSAIKHAKVKTIRNEQGIAVDFEIEGDYPKYGNNDDR
VDSIAVELVESFMNKIRKNKTYRNSYPTQSILTITSNVVYGKKTGNTPDGRRAGAPFAPGANPMHGRDTN
GALASLSSVAKLPYEHAQDGISNTFSIVPAALGKDMTERINNLSAMMDGYFSQNAHHLNVNVFDRATLED
AMEHPEEYPQLTIRVSGYAVNFIKLTKEQQLDVINRTFHGKMA
>gi|260686056|ref|YP_003217189.1| Ca2+/Na+ antiporter [Clostridium difficile R20291]
MEKRKSIHLHKLNIYLIGGGDRLFITVVLFLVGFLLITKGADIFINCTVEIGRKTNISEIILGATIVSFA
TTLPEFTVSLLASIDGHTTMSLGNAVGSIICNTGLALGLVVFISPFNVDKKMFFSKSLLLIVSVIVLILL
SLDGVITRGDSLLLIIILIFYMVNNYRSVVGKSDTKNRNIKNNTIKDISTKKGKNYRGFSVLEIVKILLL
FATGLIMMIIGSQILIESGVIIASFLNIPQGIVSLTIIALGTSLPEIVSSITAIRKNHHEISVGNILGAN
ILNIVSVIAVSAIPNNIPILSQNRQLDIPFMILLLLIVIIPTLKSNRLSRIQGILMLFTYFLYISILYFM
YII
>gi|260686057|ref|YP_003217190.1| putative ATP-dependent RNA helicase [Clostridium difficile R20291]
MNITKFEDLPISEGIKKAIAEMGFEEPSPIQAQSIPAILSGKDVIGQAQTGTGKTAAFSIPILETIDPNN
RSLQAVVLCPTRELAIQVSTEIRKLAKYSHGIKTLPIYGGQPIDRQIKSLKSGVQVVIGTPGRTIDHINR
KTLKMDNVKMIILDEADEMLDMGFREDIEMILSKIPEERQTTFFSATMPRGILELTKRYQKDPEHIKVVR
KELTVSNTKQYYIETRSSNKLEVLCRLVDVYDPKLSVVFCNTKRKADELVGDLQARGYFADALHGDLKQT
QRDIVMDKFRNGTIDILVATDVAARGIDVDDVECVFNYDLPQDEEYYVHRIGRTGRAGREGMSFTFVFGK
EMRKMKDIERYTKSKLIKHNIPTITDVEEKKVGTFFAQVKQTIEEGHLTKQLQWLEGFCNDEDYAMVDIA
AALVKLSLGEEMKEEIIEEKPRRERGDRKGGTGAKDGMIRLFINIGRNQRVQAKDIVGAIAGEVGIPGKV
VGTIDIYDKYTFVEIPKKDAKTVIEKMKDIKIKGNKINIEKANKKKK
>gi|260686058|ref|YP_003217191.1| putative transcription antiterminator [Clostridium difficile R20291]
MSMTYMDPRVFLILEMVLEEDTNTLEQFSNVLGVSTRTIRNYINQINRELKGGIAKIVKNEKGTYSIRIE
DESKLIEIVNFNRGKLSNFINLNSPDERINYVLDILTMTNNPITIDDLAEEICIGRTTLIKDLKKADRIL
AEYDLELKRKPNIGMILVGEEMDIRLLILDRLYENYIDVLENVNQINLVKDYDIECLRDELKKLFKKEEL
YITEQVLRDVERYIIMSVLRNLNGYKFEKIDKRFEVIRCSDEYTLGLKLKALLEKIFNIVLNEKETIFLT
MPLIGRKAPSTKLALSSIKINDSVKEVVDEVTSFLLETSGIDFKEDKKLIENLEYHLYFALNRMRFNIRV
KNPLLQEIKERYTFPYSVAKIAAMIIEEKFDLKICDHEIGYIALHFGSYFEKNSRKVLNVNRVAVVCGTG
LGTAQLIRIKIGKILGESVEVNTFSDIEAKANLDLLKYYDLVFTTVDFKTDLDVPIFRVNALFNEESIKK
EIENAILLKNSINLKSIKKIEKNIPFIGKLIEEDKFFILNKSTFMENLEDMLEKLVHKGIIDIEFKKKVL
KREKKSSTALDNYIALPHSVNTNGENLYLSFGILEKPVVWDTKEIRIIILMIIPDKNVDSTDLIIKSYEE
VLEVGRDKKMIEELAKVKSFDEFYKIITKRR
>gi|260686059|ref|YP_003217192.1| glucitol operon activator protein [Clostridium difficile R20291]
MDPVIFIIASLITVYLLNIFLGYLQLKDFNKNYIELKRKGRVAIGRKKGRISSGTIVLILINDDGVIVET
RKMQGVTVLARVKSFEGLVGKSLEYIEKSDLTVYNKLLKKAILDAVKQYITFEKNKCEDTNNLSTDEECR
MEVV
>gi|260686060|ref|YP_003217193.1| PTS system, glucitol/sorbitol-specific IIc2 component [Clostridium difficile R20291]
MTQFFQVLASGADSFMNLFRAGGQQFVGFVTDIVPLLVALLVTMNAIINFIGTDRVERLAKKCSANIFTR
YLILPVLGTFVFANPMTLSLGRFLPEKFKPSYFAAASFSCHTMNGLFPHINPGELFIYLGIANGITTLGF
STADLAVRYLLVGIVANFIKGVVTDYTTKFVEKQQGIALNSDIKIG
>gi|260686061|ref|YP_003217194.1| PTS system, glucitol/sorbitol-specific IIb component [Clostridium difficile R20291]
MAFNKVKIVKGSGGWGGPLIIEPTEKKNKVVYVTGGAKPETAVKIAELTGCELIDGFSQGVKDDEIACVI
INCGGTLRCGIYPQKKIPTINIMKTGKSGPLAMFIKEDIYVSGVKPTNVEQL
>gi|260686062|ref|YP_003217195.1| PTS system, glucitol/sorbitol-specific IIc component [Clostridium difficile R20291]
MAYDTKKKISEQSQGIVAKIGIALGNVTSTLFQAGRDTIDTLIHTILPFMAFVAVLIGIINQSGIGNWVA
NLLTPLIGNVGGLVVLSIICSFPLLSPFLGPGAVIAQIVGVLVGTEIGKGNIPPSLALPALFAINSQAAC
DFIPVGLGLAEAEPDTVQVGVPSVLYSRFLTGAPTVLLAWLASFGLYK
>gi|260686063|ref|YP_003217196.1| PTS system, glucitol/sorbitol-specific IIa component [Clostridium difficile R20291]
MELIYSTQINKIGDNANEFLQHNMFVTFKDNAPQELENYCYIHSENNLVKEILTNDVLSINNVDYKITSV
GELVNQNLSELGHITFKFTGEKDGAIGGTLYLEEKEIAPIGVGTILKIIRK
>gi|260686064|ref|YP_003217197.1| sorbitol-6-phosphate 2-dehydrogenase [Clostridium difficile R20291]
MKMRKVALVVGGGRSLGEYLSKHLAKVGYDVAIADLNEDNAKKVAEEIETEFGCKSVGYGCNAIDERQVI
STVKAIENDFDRIDLLVYNAGVAVSKKITDFGYKDFKFIVDVNLNGYFLFAREVSKVMIAKGIEGRIIQI
NSKSGRVGSKHNSGYSAGKFAGVGLTQSLALDLAEHKITVNALMLGNLLDSDMFESLIPQYAVKLGIPES
EVKQVYIDKVPLKRGCRFIDVANMLTFYASKEAEYCTGQSINITGGQVM
>gi|260686065|ref|YP_003217198.1| transposase-like protein b [Clostridium difficile R20291]
MIVVEKAYKFRMYPNKKQQELINKTFGCCRFVYNKYLAKRIEVYKNAKETFTYKQCSSDLTNLKKELNWL
KEPDKFSLQNALKDLDNAYKKFFKEKAGFPKFKSKKINRFSYKTNFTNGNIMYCGQHIKLPKLDMVKIRD
KQVPKGRILNATISKEPSGRYYVSLCCTDVDIEAFENTNNQIGLDLGIKEFCISSCGEFIENPKYLKKSL
NKLAKLQRELSRKTIGSLNRNKARLKVARLQEHIANQRNDFLQKLSTKLIKDNDIICIEDLQVKNMIRNR
KLSRLISDVSWSEFIRQLEYKANWYGRQIVKVGKFFASSQICNKCGYKNEEVKDLNIREWICPSCNETHD
RDINASINILKEGLRLITIQNK
>gi|260686066|ref|YP_003217199.1| putative formate dehydrogenase [Clostridium difficile R20291]
MDIIKKLSHGCTLDCHDCCKFNVYTKENNVVKIEGDKNHPYTKGFICKKGMAHLDRLNHKDRIKTPMLKV
DGVWKEISFDKAIEIMAEKLTYYKEKYTSKSVMHYDQYGSGSVLKYIGDIFFNFYGGVSRHKGGPCWSAG
MHAQKYDFGVAKSHAIEDMLNSKSIFVWGKNPAYTTIHTMQIIKKAKEKGIKIVVIDPIYTKTAQIADKY
VQVNPGTDGALAIAMAKIIVEDKLYDEEYINSYVIGFEEYKKYLSSLELSFLIDECGVKENDIRELVDLY
TNKYSSINVGYGLQKYKNGGNTIRAIDALGAITGQIGFSGGGVNYANKVYPSVINSDPYNSQSYGEDREF
YVSNISKFIEESLKNTSNKVNYASDELDTTSNKVNYISDELDTTSNKVNYVSDELDTTSNKVNYVSDELG
MALHKVNCVSDELDMTSNKVNYVLDELDITSNKTDYISNELYNLSNKSIKDNIPIKMAVITKSNMLNQLP
DLVELERVFSKIKFKVCFDMFMTDTATLCDMFIPCTNTLESEDIIYSSMTNPYITYNERAVKPAHKLMDE
YYFFMELAKKMGLNDYPFVEKRTYLEKVIEPLKRFDKNLDIEKLKNNYFTIHNLVAWEDKKFETPSGKYE
LYSESIKNLGISPTPVYISNKYKEIEDKNISFRLLTNHHADTLFSQHFMDKKSIAQAYINQRMAKKVGIE
DKDIVILRSKKAKINVQINIDDGVGNYIVKMYVGWWKKHGNPNSLTDTGISDFGGQVTYNESMVEIIRQN
>gi|260686067|ref|YP_003217200.1| anti-sigma F factor antagonist [Clostridium difficile R20291]
MVNYSLEHKNLYIEFMCSELDHHVANEIREEIDNLLSVNQVKNVVFNFENINFMDSSGIGVIIGRYKKIS
NEGGRVSVINISSRVKKIFDLSGLNKIIGIYDTYEEALSSL
>gi|260686068|ref|YP_003217201.1| anti-sigma F factor [Clostridium difficile R20291]
MNNIMEVKFSAISENESLARVIVASFAAKLDPTVDELVDIKTAVSEAVTNAIIHGYEEDSSKFVFLRCEI
EGNTIKIIVEDEGYGIENVEKAMEPLYTSKPELDRSGMGFTVMKSFMDDVEVSSVKDNGTRIEMTKKINV
PK
>gi|260686069|ref|YP_003217202.1| RNA polymerase sigma-F factor [Clostridium difficile R20291]
MEVTVAREEKKPLLSHEETLELIEKVQNGDEEAKEILISSNLGLVRSVVSRFLNIGYDREDLFQLGSIGL
IKSIYKFDPKFNVKFSTYAVPMILGEIKRYLRDDGMIKVSRSLKQIAVKAKMESEALTKKLGREPSIEEL
AKAIDVEKEDLVMAMEANFNVEYLQGVIHEEEGSPICLIDKISMKGESEEEKVVDNILLKDILGRLDKRE
RQIIVLRYFEDMTQSEIGEMLNISQVQVSRIEKKVLSKLKEYIS
>gi|260686070|ref|YP_003217203.1| stage V sporulation protein AC [Clostridium difficile R20291]
MDKNYKKYVDQISPKPTYLKNYTLAFIVGGIICMIGQAINDLYMKVGGLDKLGASSATSITLIFIGAFLT
GLGVYDLIGKRAGAGSIIPITGFANSIVSPAMEYKREGYVLGVGANLFKIAGPVLVYGIGSSILCGIIYY
IFKMF
>gi|260686071|ref|YP_003217204.1| stage V sporulation protein AD [Clostridium difficile R20291]
MKNKRIGKRTVKLENKPTIISTGTIVGPKEGEGPLKDYFDMIMTDDLYGEKTWELAESKMVETASQQAIQ
KAGKKLSDVNYMLGGDLINQIVPASFAARELAIPFLGIYGACSTMAEGLCIGSMLIDGGFADLVLSGTSS
HYCTAERQFRFPLELGNQKPMTAQWTVTGAGSVLLAPNGDGPKVKYVTVGKVIDEGIDDGNNMGPAMAPA
AIDTIYSYFEDTNDDPNSFDIIATGDLGTLGKQIAEDFLKEKGVDISKVYTDCGIEMFNLKEQDVHCGGS
GCGCSATVFAGYIYDKLRKKEFNKVMLVSTGALLSPTSTLQKQTIPCVAHAVVIVNE
>gi|260686072|ref|YP_003217205.1| stage V sporulation protein AE [Clostridium difficile R20291]
MLMDYVRVFIVGGIICLIAQVMMDYFKMQTPYVMVTYVTTGVVLTFLGLYEPLVKFAAAGATVPIIGFGY
SLATGVIKSIQSDGFLGIFLGGTTATAGGIAAAIFFGYIMSVVFTPKAKP
>gi|260686073|ref|YP_003217206.1| LacI-family transcriptional regulator [Clostridium difficile R20291]
MVTIKDIARNLGISYSTVSRCLNNNPNVSEKTKKKVVEEANRLGFHFNVNARNLAKKETNRIGVIFSNNF
NHQDTRKFFSDIMDSSINSIETNKYDFIIQPNNNISGDSNVYKMVNGQMVDGLVIVSQSIKKEEYDFLKD
NNFPHVFIYFKPSFVGEVDNFFWDDNVYGGYIATKHLIDHGHKDIITVTSDDRSSKMHEDRTKGYLNAME
EANLKTEVIKSKMDFESQVEFLEKYIDKIKKASAIFVQQDVPAISIIQELKTTYGINVPEDISIIGYNNI
ELISYFRSHLSTIDDPREQVIKNGVDSLVNIINKKSTEHIPRKLYPRLIIRNSVKRIK
>gi|260686074|ref|YP_003217207.1| hypothetical protein CDR20291_0706 [Clostridium difficile R20291]
MKEKAGIRNAIIAAFIITILAELIGPISFKVMGINVTLLSILWAIFIGMAVSPHLLGRVIPALKKFIGDN
EINVSPYLLSLTLYPLGIMFGINAGPKVGILLQAGPALLLQEFGHMGTMLIALPVGVALGLGRSALGGTF
SLCRDTALGIIGDKYGLNSPEGIGTLGTYISGSIFGTLLFSFLAPVGVLLGFHPYALAMASGMGSGSMMG
AATASLMNTVPQMSEQILAYSATSGLITAVTGIYIELFLSLPVANYYYSKVAPVIERFRGRKTRRTSNKL
>gi|260686075|ref|YP_003217208.1| hypothetical protein CDR20291_0707 [Clostridium difficile R20291]
MEKTFKTIMEQIKIVLFIYIITCFGQMIALKTQAQDLLIGSISGFLLVIIAIIIKNFVKKPNLPGFAWAT
LVAFVLSLPISPVGDIIATNVGKINFMSTVTPLLAFAGISVGNQLDILKTLSWKLVVISFIVMTSTYFGS
AFISQTVLRLNGML
>gi|260686076|ref|YP_003217209.1| putative amidohydrolase [Clostridium difficile R20291]
MECFKEVVNMNELKAKIKEEIKLLSEEKKTSFEKVSDYLFSNPELAFEEYKSQKALCDLLEENEFNVTKG
VGGLETSFEAVYSNGTNGKTVAFLAEYDALPGMGHACGHNIIGTSSVGAGIILKEIMKKHNIEGTVKVFG
TPAEERVGGKITMIKEGVFNNVDAALILHPSDASMPDDISFAQVNLKFDFTGKASHAAAFPWEGKSALSG
VIALFNSVNSMRLHLKDYARVHGIITDGGSIHNIIPEKSTAIFNVRALSIEYLNEICEMLKNCAKGAAIS
TGTNVEIVQLDEIYKEIKNDSELVNIVRQNFEVLGEDYVERDLSQGIGSTDTGNLTHEIPAIQAYIKLKE
NTATHTDEFAVAAGGEEGKVALIKAIKVLAMCGVDILYSK
>gi|260686077|ref|YP_003217210.1| hypothetical protein CDR20291_0709 [Clostridium difficile R20291]
MILKQVIEVYDILDKANANGEEVKTYLQGYGEVDVTVKELSSSKGSTDLVKLTIPGKNGKLKGGDAPTLG
ILGRLGGIGARPEVIGFVSDGDGALVAIAVAAKLLDMQRKGDILDGDVVISTHICPDAPTKEHYPTPFMD
SPIDMMTMNENEVDSSCDAILSIDTTKGNRVINTRGFAISPTVKEGYILKTSDNLLDIMQTVTGKSPFVF
PLSIQDITPYGNNLYHLNSILQPAVATDAPIVGVAITTEMPVAGCATGATNFSDLDSAGRFAIEVAKLFG
RNKCDFYDKEEWEMLIKRYGKLNRFQTFGIQ
>gi|260686078|ref|YP_003217211.1| hypothetical protein CDR20291_0710 [Clostridium difficile R20291]
MGTTKQKINKPLCGLLTCLLYYTFPKTASTMGGYKAATIQGRSPRNRDRVPMWDIIKSAPEVSTTIRGAL
YYVPWEPCPRSRAYNGQIGPTLLTDWNLNPIENNHNNHGKIIYTPVKYFCVYHEVLLATIENG
>gi|260686079|ref|YP_003217212.1| cytidine/deoxycytidylate deaminase family protein [Clostridium difficile R20291]
MCLRRKRRIKDYLYGYNRRINLMKWKELYNNARGKLNPRTISPFIDAGGVAAAILTDSGNVYTGVCIDTA
CTLGMCAERNAIANMITNGESKITKLVCVMSNGSVGSPCGACREYLMQLDKDSACIEILVNVETEKTVKL
SELLPDWWGSDRFI
>gi|260686080|ref|YP_003217213.1| penicillin-binding protein [Clostridium difficile R20291]
MNNDNDKNGNKIRRKKVSSSGNTNKPINRTSANKTRSTKNKKKSKKSDKFKKLRVFGIVFLVLLVVGTAG
TAGLVFASLRDVTPVTEAVLDKQTNQTTTIKYANGKTLSTAPSVNKKTPVPLDKISPYLQHAVIAIEDER
FYEHKGVDIKGLFRSVLKTLTGTKQGGSTIPMQVSKMLLTTEQQTIPRKIKDIYYAHEMSKTVSKDKILE
TYLNNFFVGRGLAGAEAGARGYFDKSAADLTLAESALLAGSTKNPSRFSAYKTSKLEGNETKEDLENKLL
FFVNTTDDDLDDPTQVDFDMIEKIKSWELISNDTYRQLKAGTLVVRKAVSNPEAKKRQEIVLKKMLELKY
IKQSEYDEAIKAKIEIKLPQSSDKVSSSVEDLIESEVINALMEQGHTNDEAQNLFYNGGLIVNTTIDPKM
QDALEEEFDRNSNFPGHMVGPDGVSQPQAAMVILDYKNGEIRALAGGRNISGRKTLNRATNPHQPGSSIK
PLAIYTPAIDTLKITQSTALSDSRGGYKFEENNKWNPRTTTAGHGSMSLRKALAKSSNTIAVKTAEMLGD
SYDECVDIMMDYLKNFGITTLKNNHSGSSEASDRKFPSLTLGGMANGITPLQMAAAYGTLANQGVYVEPS
IFTTITTFDGQLLVKNAPEEHKVVDPEVAYVVTDMLESVITEGTGGVATLPKGMPVAGKTGTTNSAYDAW
FVGYTPYYVGATYIGDDAGRKDDSGNTIKRREVPHGSTSTAKLWEKIMEKIHANLTVTEFEVPKNVYFTK
INLEDGGKQSSGSKAAFIEGTAPTKVSSQPSSEDTKKPDNNQPEENNNNNNNTGDNGGGSTPPDNGGNNG
GGSTTPPDNGGNNGGGSTTPPDNGGNNGGGSTTPPDNGGNNGGGSTTPPDGGGTPAT
>gi|260686081|ref|YP_003217214.1| hypothetical protein CDR20291_0713 [Clostridium difficile R20291]
MNRIVDRKTKNEFRKIIAIFLVILFLSVFIGSFIYIDKTLRPTITVLAETKALELANRSINKAVAEMVEG
KINYEDLMDIQLDNNGKITMIQANTIMMNEIASAIALEIQDELKKDKTASSYIPIGTALGSPILAKYGPK
LEVSIEPIGTVSVNFKTEFESSGINQTRHRIYLEAQTQVKVVIPLITSTKQIKAQIPICETIIVGDVPES
YVNIPEKNLGNVLPNTGKNTNK
>gi|260686082|ref|YP_003217215.1| putative stage IV sporulation protein [Clostridium difficile R20291]
MQLKNFHFKNNTLSKKTNLAKSKFTIVLTFLFLLYFFSNNLIYAQNLQKNEPEYLIPIGNVLQIDAELKN
IIVRNPGEASPFRLGDAIVKVNNSEVDGYSDFANTLNALPEEKQVSILLNRGGQLITMKTTKHILEKISF
NNLLSGFATLTYINPDTSEFGAVGHPISVGNARKIPIKTGSISTTKHLNIEKSYKGSVGCINAKRENIIG
SFTENTDFGIRGQINNFDISNLKKYKVASLDEVKLGKAQIILQDNFNKCKKYNIEIIDIENQKHPESKSF
KIKITDKKLLAQTGGIVQGMSGTPIVQDNKIIGAVSHAIENDPAVGYGVFIKWML
>gi|260686083|ref|YP_003217216.1| putative N-acetylmuramoyl-L-alanine amidase [Clostridium difficile R20291]
MKKYRLLVTCIIAMGIIIIGTSNPVSNFYKTTNLISSGNITNEKADKDENSNKNNKDKNEDKSNSKSNKD
KSSEDKSSDKKNKIQKNKKLLICIDPGHQGKGDSNLEPVAPGSSSKKARVSSGTEGIATKKPEYVLNLEA
SLVLKSILESKGYNVIMTRETHDVNISNSERAILANDKKADMVVRIHADSLNNSSKTGASILIPEKDGKY
TAPIYEESNKCAEFIKQNMEQSGIQINGIVQRGDLTGFNWSKVPAVLVEMGFMSNYNEDQMMSNPDYQRK
MMQCIADGLDAYFK
>gi|260686084|ref|YP_003217217.1| ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MCKIFLRGVEMLVVENVSHGFGARTILENVSFRLRKGEHIALVGANGEGKSSFLNIITKKLMPDAGNIKW
SSRATVGYLDQHTVLSKEKTIREVLREAFKHMFDLEQEMIAMYDKMGEASDDEMSKLLEETAEIQTILEN
SGFYMIDAKIQEVANGLGLGEIGLDKDVTDLSGGQRTKVLLTKLLLENPTILILDEPTNYLDEEHITWLT
KYLQEYENSFVLVSHDIEFINNTCNVIYHMENGELNRYKGNYDEFVRLNDIKKRQEEQAYDKQVEERKRL
EDFVARNKARVATRGMANSRQKQLDKMEILERPKEKIKPTFAFKDARAASKIIFETENLVLGYDEALTKP
LNFHLERGKKIALKGMNGIGKSTLLKTLLGIIKPFEGNVKLGDYLEVGYFEQESSRENSNTPMDEVWSEF
PGLTNFEVRQALAKCGLTNEHITSQMRVLSGGEAAKVRLCKVMLKNINFLVLDEPTNHLDVEAKDELKKA
IKEFKGTVLLVCHEPEFYSEIVDDVWNIEDFTTKIV
>gi|260686085|ref|YP_003217218.1| hypothetical protein CDR20291_0717 [Clostridium difficile R20291]
MKKFLNVLFSVCISIVIIVGVINFTVGFKQLYYFDIDYLNISELSGLSEDDIKLNYDYLIDYNLNKNVSE
FKLPTLKSSPQGKIHFEEVRNIFQNINKLAKLLLVVFLVGIILSVKNKNIKILKTTSITLIIMPLLLTVP
ILLNFEKSFIIFHKLLFRNDYWIFNPNLDPVINILPEEFFFHSGMMILILILLASILLFVMYRLYKSFKI
K
>gi|260686086|ref|YP_003217219.1| putative metal-binding protein [Clostridium difficile R20291]
MGENYKFFNHKDCEFFPCHKTNKPEEFNCLFCYCPLYALGENCGGNFKYTDKGIKDCSSCMLPHKKDNYN
YIMGKFQDLVKITSKK
>gi|260686087|ref|YP_003217220.1| putative ATP/GTP-binding protein [Clostridium difficile R20291]
MKEIQEKALLVGLNLTTIVKKNDDIDTSESMEELKELTKAAGAEVVGSLIQNKHSVDAAYYIGKGKVEEI
RAYSDSLDATLVIFNDELSGAQIRNIENVVGRKVIDRTTLILDIFAQRALSKEGKLQVELAQLKYRLPRL
YGMGGEMSRTGAGIGTRGPGEQKLEIDKRHILNKAADIRRELKEVKKNRETQRVKRLKSNIPIVALVGYT
NAGKSTLLNELIKTHKDYEQEKEVFVKDMLFATLDVTLRKALLPNKKEFLVVDTVGFVSKLPHDLVEAFK
ATLEEVQYADLILHVIDATNTSYELQKSTTEGVLKELGVNDKKHILVYNKVDKLELDIYPKSQEDIVYIS
AKQGINMDKLLNMIEIALMENTYSVSLMLPYERGDIFSRIKDKYNVENFEYGENGITLDVNFDEEDFNIY
REYILEK
>gi|260686088|ref|YP_003217221.1| hypothetical protein CDR20291_0720 [Clostridium difficile R20291]
MDINWENIDNLEDYFITYLLYKESKTVSQISKIRNISSTEAGEQLIQAKLKIKEMQKDDFEASKDILDKF
LELDKIKRLDFMDSLDDEKMVYFKRKVFKRILVEKNAEDLIVLIWATGELKDDRFLKLLHQLTNHRHSDI
RRITYSAIRKIESPSSREVLQKGLYDKNAQTRQYCAKALSKLGDENSLKILQQLKDKNKNFEKEYVLRAY
DEAIKSLENAKNLKK
>gi|260686089|ref|YP_003217222.1| putative NUDIX-family hydrolase [Clostridium difficile R20291]
MIVRRCAGGVVFYANKVLIVKNDRGEWTLPKGKILGGGLPYESAVQRVKVETGIDAKMIDVAGDTMYEFF
SRSRQQEVCNAIMWYVMEACNTNCVLAPEFQEGGFYKVKDALDMLSHHKEQALVEVSYKKFKELKKLVSE
GDDVPAN
>gi|260686090|ref|YP_003217223.1| hypothetical protein CDR20291_0722 [Clostridium difficile R20291]
MIKIGGNTMSNYRTLHEFGTDEITIEKSVFIGYAKPIKSEEEALEFINEIKKKHKDATHNVWAYTVGKNM
NIQRYSDDGEPQGTAGIPTLEVIKKEDLRDVVVVVTRYFGGTKLGAGGLVRAYTKGAKLGLEAGKIIYKV
MYQEVKVKIDYTQLGKVQNELMNLGYFIKDTVYEDNVEIVVYSRLEDVEKLSEKMIDITNGTGKIILGEE
FYLSEQNGEILI
>gi|260686091|ref|YP_003217224.1| hypothetical protein CDR20291_0723 [Clostridium difficile R20291]
MLFALIGFFAGIIGGMGMGGGTILIPALVLLAGIDTKIAQSVNLLSSIPMTLIALAIHIKNKNVIFKLVI
PIAVFGVLGAVFGSLLANYLSSDILKKIFGIFLLLVGLFEVKKGFCAKSDKKPLN
>gi|260686092|ref|YP_003217225.1| hypothetical protein CDR20291_0724 [Clostridium difficile R20291]
MKKTDDLKKKYFDFNLKNTIIGVFTGFINGVFGSGGGTLLVPILNDIVKVEEHKSHATALSIIIFLTTAS
SVLYVSKGTYDVNLTIKVAVGSILGGIIGAKLLNKVTGKFLRISFGIIMIIAALRMVF
>gi|260686093|ref|YP_003217226.1| NH3-dependent NAD(+) synthetase [Clostridium difficile R20291]
MSNIKIQIDKTVEWLINKVNEANAKGLIVGVSGGIDSAVVANLIKKAFPENSMGVIMSIKSNPQDREDAL
KVIEGCDIEYLDLDLIEPQSAILDMVVGNLKDKHLYRAEYLKMTDANLRARVRMSTIYTIANNLGYLVVG
TDNAAEIHTGYFTKFGDGGVDILPIANLTKGEVYEWAKELGVHEDLINKAPSAGLWEGQTDEDEMGTTYN
MIDAVLEGRLDEVPKRDQEIIERLHRLSEHKRKTPAQPPKF
>gi|260686094|ref|YP_003217227.1| hypothetical protein CDR20291_0726 [Clostridium difficile R20291]
MGRIGNIINRKGKQDAQRAKIFTKHARAIAVAAKEGGADPEYNAALKTAIEKAKADNMPNDNIDRAIAKG
AGAGAGEDYETIVYEGYGPGGVAVIVETLTDNKNRTAGNVRYYFDKNGGNLGTSGCVSFMFDKKGQILVG
LGDGVSEEELMDVALEAGAEDFITEEDGYEIITTPEDFSSVRDELKAKGYEFISADVKMIPQTTTVLTEE
SHLKMMNKLVDMLEEDDDVQDIYHNWEVE
>gi|260686095|ref|YP_003217228.1| LacI-family transcriptional regulator [Clostridium difficile R20291]
MATIKDIAKDCGLSSATVSYVLSGKGNERRIPLHTQELILNSADKLGYKRSTPIKHNNIKIAFYWQDEGF
ELASTNILQAINHIISLEHLNINIIIRPYKVGHLCDDEYFFANNYYDGIVLTGINADDIEYLVKNKPKIP
VVVVNREIPGFSSVSIDNEETGRIAALHAIQNGKNDIAVVFNPTSFTCMTLRGKSFLKTCKEHGIHLSDS
IYYCSNKIDSGYDIAQKMLAKNSLKKVIFCNHDVVALGMMNAFHESGIVIGEDIQIFAASNGPSRLMARS
IPPLTVIDLKMEETAERSLRMIIDTVTGRINGIQQQVIYPSIIYRQSSPAQNLL
>gi|260686096|ref|YP_003217229.1| putative hydroxymethylglutaryl-CoA lyase [Clostridium difficile R20291]
MSKVNIFEVGPRDGFQNLKEFLETDKKLKIIDGLIASGIKQLEISSFVSPKAIPQMKDAKEVATYCVEKY
PDVKLYALVPNLYGAKVAWECGIRDISYVISLSETHNKKNINRTHEESIDELKKIMNTYPDMNICIGMAT
VFGCPFEGLPKIEDAIRFAKRLWENGIREINLADTIGIADPKQVRETISALVEALPECRWQVHIHDTRNM
GMVNTLVAIESGITTVQSTLGGLGGCPFAPGASGNTATEDLVYMLERMGYDTGVDFVKLLELSKYQKSFV
NGVYSGHHVNIKSDSCNC
>gi|260686097|ref|YP_003217230.1| hypothetical protein CDR20291_0729 [Clostridium difficile R20291]
MLIGKIDLLIKKINYKIHYLIKQIKKLRGISMDIIALLLFLGVIIIAFVRKNNAGILALAIGVIAVRIFG
MDDKELYGAISNSMFTTLVGITLLFAIVNSTGALKLVAEKIVAASGKRVWLIPIAVFIAGFVVAGVGPGA
IPALAIIPAMAVPVAITVGYNPVMLALIGECGLMAGRMTPITPEGQIITTVAEGVGIENVMPTILACQTL
STIVFSIVLFIIFKGYKLKKPINVIDSKQIEKFNIKQIISLISIVVMIAFIIIFDMNVGLAAFAVSAVLI
FFNIADEGECIKSIPWSTIVMVLGVGAMMTIVDAAGGIDLMSNALSSLMNSKTATPIMSISAGLMSMVSS
ALAVVYPTMMPMCVDIAKAVGGVDPLALIAAVGVGGSLAGVSPLSTGGALILAAMGSSKKDFNKEEQNKV
FVQLFIMSAVGLLVIAVVSILSFNAITHLMN
>gi|260686098|ref|YP_003217231.1| putative beta-alanine CoA-transferase [Clostridium difficile R20291]
MKKGALSNIKVLDLTRVLAGPYCTMMLADFGADVIKIEMPRKGDDTRGFGPFVNGESLYYANINRNKKGI
TLNLKSEEGKNIFLEMVKHADVVVENYRPGVMEKLGLGYDELAKVNNQIIYGAVSGFGCYGPYSERPGYD
IIAQAMGGLMSITGQEGGEPTRVGNAMGDVLGGMNLTIGILTALNARKIIGKGQRVDVSLVDSVVSSLET
GIQRYFDSGQPELMGNRYASAYPYDSFKASDGSFVIGCGNDKLFEKLCKKVLFREDLLIDERFKTNLKRC
EHYKALKPEIEKWSVKHTIKEAVDLISEAGVPAAPIYNLDCVTTDEHIAKAREMIVDISHPIIGNMKVNG
NPVKLMTTKAKIDMPAPSLGESNEEIYNGWLGFDSDKIKDLKENGVI
>gi|260686099|ref|YP_003217232.1| 3-hydroxybutyryl-CoA dehydratase (crotonase) [Clostridium difficile R20291]
MYNGGNMMESVMENLNNLKVEVKDKVCVITINRPKALNALNSDTLRELSQVIDVVSENEAILGVIITGEG
KVFVAGADIRQMQNYKSEEGRKYAGYAQGIFDKIEALEKTVIAAVNGYALGGGCELAMSCDIRIASEKAI
FGQPEVNLGVIPCFGGTQRLSRLVGTGIAKELIFTGRQVNAEEAKSIGLINKVVPSDLLLEESMKMMNQI
VEKAPIAIRYAKVVINKGIDMDLKNALELEKDIAGLTFATRDKQEGMNAFIEKRKPVFENK
>gi|260686100|ref|YP_003217233.1| putative permease [Clostridium difficile R20291]
MNTGVIISLVGIIIALSLLVVMVMKGINIFIIAIVCSSLVAITGSLNVYDALKVDYMTGFVGFLQANFFI
FLTGTLMGKIMEITGGAKSIAKMIVRWIGKDKALLSIPIACGILAYGGVSVFVVSFAVFPIALEIFKEAD
LPRRFIPAALTFGCSTFAMVAPGAPQIQNIVPASTLGTDIMAGAVNGFISCAVMFIVGSTILYKMVSKEK
ANGGHFIAHESDIFDEAEATNSKRENGPNGVIALIPLIVSILIINVKVNGKAIVPIEVGVFIGALLVYLL
LNKYQDNTKIVGHVGDACKTTVVAICNTCAVVAFGSVVKSAVGFDFIVNAMTNIPGPPIAGAAVGTTVIA
GICGSASGGLGIAAPLLGPVFLAKGVSAAALTRTMAISSAALDSLPHNGYIVTVTNGLCKETHKDAYMPI
FWVTVLTPFIGTIVAVLLFTMFPGLP
>gi|260686101|ref|YP_003217234.1| putative CoA-transferase [Clostridium difficile R20291]
MLNKPLEGVKVIDLTYFVAGPGTSKILADWGADVIKVEPSFGDPGRKTGATMTMPIDDYNNPFYSTYNSN
KRGLSINLKSETGIEIMDKLLSEANVFVSSYRTGALKRLGLDYESLSKKHPHLIWGQINGFGDFGPAKDN
AGFDTVAFWARSGAMLDIAEKDTSPINPPIAFGDATTSCSLSGGICAALYQQAKTGKGQKVMASLFGQAI
WNASSLLASTQFSDEYPKTRKNAISPVINSYRCKDGKWIFLSILEHERYFEALCRLFGREDLIKEEKFAS
SVESKKNATELINILDGEFAKFTQNEMVEKLTAADIAHEKIQHVNDVVTDEQAIANNYIYEHTSKNGNKT
MLASTPVKFGNIEVNMTCDAPLIGEHSDEILRELGYSDSDIEALIESGIVTMNKEACEIC
>gi|260686102|ref|YP_003217235.1| putative acyl-CoA dehydrogenase [Clostridium difficile R20291]
MDFRLTEAQLMLQRVAKEFAENEIAPIAAETDKTGIFPRELFSKMAKIGFNGIGTPVEYSGSGGTDIEKV
IVVTEIAKKCAASAAILSIHTIYAQAILKFGTEEQKKKYLPMMAEGGCVGAFALTEPNAGSDAARAATTA
IIDEETDEYVLNGTKCFISGGGQAESLIIFALTDPSKGIKGMSAIIVDKGTPGFSIGKIEEKMGIHGSET
AELIFDNCRVPKSNLLGKEGKGFNIAMTCLDGARIGIGAQAVGIAEGALEESIKYSKERVQFGKPISALQ
GIQWYIADMATMVESAKLLVYYAADLKARGEKHTKEAAMAKYNASSTAREVTNLALQIHGGYGYMKDYPL
ERMYRDAKITEIYEGTSEIHKVVISRAVLG
>gi|260686103|ref|YP_003217236.1| electron transfer flavoprotein beta-subunit [Clostridium difficile R20291]
MNIVVCLKQVSDTNEVKINKETGTLIRDGVPSIINPDDRNALEEALKMKDELGAVIKVISMGPPQAKSAL
KEALAMGADEAYLISDRAFGGSDTWATSTIIAAAIEKVGKYDVIFCGRQAIDGDTAQVGPEVAEFLGIPQ
VTYAKEVKVQDDKLLVTRYTETGDYLIEAKMPVLLTAIKELNNPRYPSVKGILEAYNNGDAKITVLTLAD
LDVDTTQIGLKGSPTNVYKSFAPVKDKHNEIIEGINKKEKAEKLIEILFDLKLV
>gi|260686104|ref|YP_003217237.1| electron transfer flavoprotein alpha-subunit [Clostridium difficile R20291]
MMRAKVNQGINLNDYNGVWVIGEQREGKINPVTIELIGEGRKLADQLGKELEVVIAGYEVEKEVKELLHY
SVDKVYYINDPLLKDFTTDGYAISIANLIERKKPEVVLVGATSIGRDIAPRIAGKVGTGLTADCTKLEID
STDNKLLQTRPAFGGNLMATIVCPKNRPQMSTVRPGVMAKAVRNESETGILEVVTPELTEKMIRTRLVEV
LPQEKKSVNLTDARIIVSGGRGLKRAEGFELIKELADKLGAEIGASRAAVDSGWIEHSHQVGQTGTTVRP
ELYIACGISGAIQHLAGMSDSKYIVAINKDAKAPIFSICDYGIVGDLYEIIPEMIESLNR
>gi|260686105|ref|YP_003217238.1| putative sigma-54-dependent transcriptional regulator [Clostridium difficile R20291]
MKEQWYKDIFARILSMTDDGFIVVNTSGVIIDINDKYCDFLGKERKDIIGQNIQSIIPNTKMLDVMKDKY
CEEGAIHHYSGGNTKEKSVIVSRSYVENDNGEVVAGVAQVKFRLQSFDVAKKLMSEYMELQYYKEQFKDN
CGFDKLIGENRDFIELKKTGVKASKTNFPVLLTGETGTGKEVFARAIHNNSSRSDKPMVSINCAAIPEEL
LESELFGYDEGAFTGAKKGGKKGKFLVANNGTIFLDEIGDMPLTMQAKLLRVLQESEIEPVGGLKTIKID
VRVISATRKNLSKMVEEGLFREDLYYRLNVINIHMMELKDRQDDILLLANYILNKLNVEYKELKVLSDKV
KNCFINYTWPGNIRELQNVIKSAYAVSDDMVIMMCDLPSKMDNISRVAQCNVDSNCSIHEMVENYEKSLI
IDVLRKYNWKCSKAAEVMGIHKSLLYKKIKKYEIELNN
>gi|260686106|ref|YP_003217239.1| hypothetical protein CDR20291_0738 [Clostridium difficile R20291]
MDQIKRLHELQQKSYLTKEEFEELKNNTYIERFELRDECDNSYIYTFYTNDKCNDIKFIKSQFIVTLIKI
GFLCECGGVFRQKKIVDEYDYGYNAIYKCDSCGKELDKEVENYD
>gi|260686107|ref|YP_003217240.1| hypothetical protein CDR20291_0739 [Clostridium difficile R20291]
MSLVFFHKIICMLKNKLITLIPVYNAQNMWYILTIIYLYILLSEYLKLNLYKTSLFIYHLYLDIFSFFSF
RVSKGLVV
>gi|260686108|ref|YP_003217241.1| hypothetical protein CDR20291_0740 [Clostridium difficile R20291]
MHEDKNDIFESIDTEDFDNKTEEECLELVRKNGLNLIYIKNQTEEICLEAVRQNCNAIKCVQNQTEKICI
EAVKQDWRMLEFVEESTEEICMLAINQDGTALKYIENQTEELCLRAVEKNGAALEYVKEQTEEICIEAVR
NSEFGLARVKNQTEKICMEAVKHCSYNLKWVENQTEEICMEAVRQNGLDLKFVKNQTETICLRAVRQNGM
ALEFVKEQTVGICLKAVRQYGMALKFVKEQTEEICTEAIKQDKRALSFVKGDKEKYKALYDNNEPFAKRY
VRNVIEKENRALIKKGEENAKIKIAGKLYDRGMSFEDISDIVEIEISKLKVSLGVF
>gi|260686109|ref|YP_003217242.1| putative flavodoxin [Clostridium difficile R20291]
MYNKLFLLDKGELKLKITVLYQTRSGNTERVAKLIEDGAKKVDGVDVKLMRLDNIDLDYLNESKAVIFGT
PTYLANTTWEVKKWFDEDSKKVNLAGKLGAVFATCDYICGGPDVAILTIVGHLMVKGMLVYSGGGSLGKP
FIHLGHVHSIEGPELQDEKAIIFGERIATKAKELFA
>gi|260686110|ref|YP_003217243.1| putative signaling protein [Clostridium difficile R20291]
MVWHIEYEIFSAIIVIFLMVYFFRSKFIPTLQNKIYCALLIFSFLFILSNILGSFCLNNIDKIPIFITFL
LNQIYLLLLPIPAALVSFYVMAIIYQDIRYMKKRLLFLSIPLIICIILSITNPFTHILFGLSKETGYIRG
CGYVATFASFFFYAIYSAFLSFKYRKAMHESKIWAIRGFLIVSIVAIILQAIFLQYLLTGTACACSLLLT
YLSMQNRGLIIDDLTGVLNRQSFIQELDLNINTEQSGFIITIALDDFKFMNETFGTKNGDIALKEVGKYL
IQIHDVNHVYRIGGDIFSIVVNSQLGIEPDDIIRKIEERFKKPWLVEEISFNLATSIAVVYYPENAETTE
DVIVAIDFSIHEAKRSESRRVVYADASISEKIKKKHVIKNCLKEALKNDGFEVYYQPIFSNSRGRFTSAE
ALLRLEHKELGFIPPDEFIPIAEQTGLINSIGLVVFEKVCRFIASDEFENLKLDNIAVNLSVVQCMQKNL
ADDLLYLMNKYNVSPTKFKLEITETVAMGSFNIIKETMERLIDLGVKFALDDFGIAYSGVTNMLSLPFSV
IKLDKSLIWSMNEDSRHKLTVETIIALINKLNMKAVAEGVETIKCAEDLIAMECEYLQGYYFSKPVPEDV
FKNLLKENTFTS
>gi|260686111|ref|YP_003217244.1| putative universal stress protein [Clostridium difficile R20291]
MNKKKILVPIDGTERSMHSLEFIKGIFKKDEVEVEIMNVKELVFIDGISLAEEIKNSENLGRRILDKAAE
IMGEYDVKVHFTFGYPGDEIIRKAKEDNVDFIVMTKSTKKGLTRMIGSVTASVVKQAKCIVMIVPE
>gi|260686112|ref|YP_003217245.1| putative PTS system, IIb component [Clostridium difficile R20291]
MNKKIVAVCESERSLNSLKTAANDLGFDLVYEIQENDNIKNELSIYDIEDASIVLFVTSDSIESIEKIDR
FIDREFYEVDPKYIIEDAKSIVSEILIDLN
>gi|260686113|ref|YP_003217246.1| GntR-family transcriptional regulator [Clostridium difficile R20291]
MKSLNATEKIIDYIKLNILNGTFKINSKLPSERKIADLFNISRIPVRNAINILCKEGILRAVPYSSPIVE
GFKKVDLFDDGEIYKNHNIQEFYVESLRARQLIESEATKLAILNATSKELQKIKYTYLKSIEELDKVSHG
LIEECYDADLQFHKEIILASHNPIFIKYYELIPKTVSSNQYFGFKYRNSLKDMISHHNKIMMAFDSKDSY
LGYTSMYNHLEDVIQLFQHD
>gi|260686114|ref|YP_003217247.1| putative transporter [Clostridium difficile R20291]
MEDNMKKISNQKLLLLSIVTFFWFSQYVYIPFQNPYLSACNVSTNMIGIIIGAYGISQCLLRIPVGVFAD
SINKHKIFILSGIFFAGLASLIRVFSPGGNGFLIANILSGISSSTWISYMVHYTNFFSTEHQQKATSTII
LVNNLGMLIGFVMSTLFYEKLGMTALCIMSVLSSVIGTILALNIKNHNSKKIPEKISIKKYLSICKDKRL
VFFSFMALIQQGIQMSTTMSFTTQILKNLGSSSTLIGLSSISYMVCAVASSGFASTKFCTKYGPKFWIPL
VFILVSAYCFLVPTIKNINIIFVLQVLPGISTGILLSYLTSESMKNVPKHQKSTAMGFFQAIYAIGMSVF
PMIVGKISEYTSIQYGYFILAIIAILASILSYTYYKKVDLTLNYDIIQS
>gi|260686115|ref|YP_003217248.1| PTS system, IIabc component [Clostridium difficile R20291]
MDYKNIAQEILLNVGGKENVNEVTHCMTRLRFKVKSASKVNKDKLSKTEGVITVVESMGQIQVVIGNKVK
TVYDEVIKIVPQSNDVGKKNESQEKQSIINSILSAVAGIFTPTIPAIAGVGMIKGILSVLAMYYMNKNGV
DIKETQSYIILNAMADSIFYFMPIILGYTAAKVFNANKIISMVLGATLCYPTFTALMAGEESVRFLGLAV
TKATYTSSVIPIIIAIWALSYVEKVLEKYIPEVIKIIMVPTLSLVVMLPATLFLFGPIGIYIGNVINFSY
KYIYELSPALCGAFVGGLWCVLVIFGAHRALLPIGISDVAQTGRQNLLAFAGAANFSQAGAALGVFFKTK
NQGLKTISMSATITALFGITEPAIYGANLRLKKPMVCAVICGAFGGAIMGMGGAYGNAFANQGVLTIPVY
AEAGALGFLSYLGGCAIAFFGSAISTYLVGFEDLEESSNKENSFIKVETKDGVIDITSPVEGECIELSEV
KDDVFASKAMGEGIAVLPTKGVITAPTDCEVASLFPTLHAIGLKLDNGAEMLIHVGINTVELNGKYFTKH
VNQGDLVKKGDKLISFDIDKIKKAGYDVTTPVIVNNTFDFGQVVSCKSSYVSTNDNIISLVLAGN
>gi|260686116|ref|YP_003217249.1| putative 6-phospho-beta-glucosidase [Clostridium difficile R20291]
MNTGFPKDFLWGASSSAFQVEGAWDKDNKGKTVADYNSFKKSHLQADTKVASDFYHNYEEDIELMKELGM
KTYRFSISWARIIPDGEGEINQKGLDFYNKIIDKLIECDIEPFVTLYHFDLPFKLVEKYNGWESRETVYA
FERFAKICFKHFGDRVKYWQPHNEQNLIVRVEERINIYDETDSWKIDKMRAQMDYNLCLAHALAVNACHE
MIKESKIGAAVSSSVTYPLTSKPEDVYAARMNDNFKVYYMLDMHHYGEYPGYYMKYLEKRNTVPHMEDGD
KEILKKAKMDFIAVNYYRTNCAEALPEDSQHPFGLREGTVDFSMYGLFKMSMNPNLEASEYGAAIDPSGL
RVALNEYWQRYHLPVIITENGLGAKDILEDGKIHDDYRIDYLRSHINACKLAIEDGVEMIGYCPWSFTDL
LSSSQGFNKRYGLVYINRTDHEVLDLKRIKKDSFYWYKEVIENNGIVK
>gi|260686117|ref|YP_003217250.1| putative transcription antiterminator [Clostridium difficile R20291]
MYITKVLNNSLLLAKDDNDEEIILMGKGIGHNYKAGSELNKKDIEKIFVLHDENIKKSIIQLATEIDAEY
FGIAQMIIAYGIEKYNLKLMNHIYLALTDHIAFAVRRFKEGIMIENHYLFEIKEFNPKEYDIGKYAITVF
KEVLGLDLPEEEIGNIAGHFINAQQDNPYSDRNKRSAKIVNAILQIVHYHFSIVYNKESFYYRRFVMHLK
AFSQRFLANEPSREKIDFIYEQVQKNCKEEYECVKKVGAYMYKEYSRELPRQEELYLMIHIHKILGELCE
NS
>gi|260686118|ref|YP_003217251.1| two-component response regulator [Clostridium difficile R20291]
MSVERGTKMNKVLIIDDDKDLCILLKKSISIEQIEANYCHSGRDGLVELSKQDYQLVVLDVMMPGMDGFE
TMEQIRKYSSIPILMLTSKSDNYSKVHGLRAGADDYLTKPFEITEFTARVLSLIRRYTRFNPKNEEPQQL
SFKGLLIDLDQHTVTTNGEPMLLPPKEFGVLLYCARHQGKILTKQQIYEAVWGEPYVYDDSNIMAIISRL
RKKIELDPSSPIYLQTIKGIGYQFNTEV
>gi|260686119|ref|YP_003217252.1| two-component sensor histidine kinase [Clostridium difficile R20291]
MKMDEQTIILFLFLLSIGLLFLSIFAFSKLGHIHKRLKDIEEILADVQIGNENRKILIKPCDVMAPLVYQ
LNEIVYDYENKLLSLKKSDKASKQLMTSLSHDVRTPLTTLIGYLDAVHSGIVIGQEREEYLEIARRRAYD
LKDYIDVLFDWFRLNSDEFTLSIESVEIAELSRNILKDWIPIFHEKKLNFEIDIPENRLMVNLDPDGYSR
VVNNLVQNVLAHSKARQIKITMSEDSRMVLLRVDDDGVGIARENLPHIFERLYKCDKGRSEKGSGLGLSI
VSQMVERMGGQISVESEIGKYTVFTVSLPLI
>gi|260686120|ref|YP_003217253.1| putative lantibiotic ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MNNLIIETKNLTKQYGAQKSVSNLNIHVQKGRIYGLLGRNGAGKTTTMKMLLGLTKPTTGEIKIFGQDIH
NNEKKLLPRIGCLIESPGFYPNLTGTENLKIFARLRGIPKKNAVESALDVVGLPNNDKKLFSQYSLGMKQ
RLAIALAIMHDPQLLILDEPINGLDPIGIAEVRKFIRDLCTERGKTILISSHILSEIALLADDIGIIDHG
ILLEEESLAQLEEKNSKYIHFAVSDAAHAARLLETQLNLKNFKVADNYNIMLYDTDVSVAEINRAFILNN
IEVSESHLCEDTLEDYFKKVTGGEGIA
>gi|260686121|ref|YP_003217254.1| putative lantibiotic ABC transporter, permease protein [Clostridium difficile R20291]
MKELLDIISCEFSKLKRLKFILISILGACLFPIPATILIAKDNLPFEQLFKLVVNFGYFLLLPIVLSIVA
SQLFFIERDNDVLKNLATVPVPKGKLALAKLAVLLFISLFYSVAGLGATIIGGFIVGIVEGVTVKLGMSI
AFGIMFFVTVLPVVVLIVYFNRSYIFSIILSFVYAIFNFSISLNIINFEPNNPLLSVLPAPVIMRWWMAF
WGDPTGEYTALRQPYLLSTPACVGILCLITIIAVLLICMIYKKQEN
>gi|260686122|ref|YP_003217255.1| putative lantibiotic ABC transporter, permease protein [Clostridium difficile R20291]
MLDIITTEFQKIKRYNILWIGVVAVLFSALLAVFQVVSSHGSDPLTYESFANGVIWNNFSLSFPFGITLI
GGYLINREYTDQTLKNILTVPISLRKLLVGKLIAVGGIAVLLSLFSFLCTFILGLLFCNINISVTLIVKS
LVQILSVNLYCYVAVLPIIAYFGRKQNAFLTGVGIAFVYGFCGVFVAGRNLTDFYPITAGLGLVGYNNGA
GTVYQPLIGAMTLIVILILTTILLVFTPNYDKVMTISKKKGIKHKKYSHK
>gi|260686123|ref|YP_003217256.1| rubrerythrin [Clostridium difficile R20291]
MNLKGTKTEKNLMAGFAGESEARNKYTYYASKARKEGYNQIAAIFEETANNEKEHAKLWFKLLHDGMPST
EENLKDAAAGENYEWTDMYAKFAKEAREEGFDKIAYLFEAVGKIEKEHEERYLKLLENLNEGKIFKRDEE
VVWQCQNCGHVYVGTEAPEKCPVCDHPKAYFNIKAENY
>gi|260686124|ref|YP_003217257.1| putative oxidative stress regulatory protein [Clostridium difficile R20291]
MKFSKQRELILNEILNNPVHPTADYLYENLKKDNPNLSLGTVYRNLAQLTEHGFIRKVSIPGYPDRFDGR
IDNHYHIICEVCGEVYDLESEVLNNLQELISEETDIKITSYNISFKGICNNCKRCSQVG
>gi|260686125|ref|YP_003217258.1| rubredoxin oxidoreductase (desulfoferrodoxin) [Clostridium difficile R20291]
MCSEQKFFICETCGNLVGMIQSGGVPIFCCGKPMKELVPNTTDAAVEKHVPVIEVDGNNVTVKVSSTTHP
MTKEHHIAWVYLMTEQGSQRKCLAVDGEPVVKFALNDDDKVISAYAYCNLHGLWKAEL
>gi|260686126|ref|YP_003217259.1| putative oxidative stress protein [Clostridium difficile R20291]
MSIYKCSVCGYIYDESKNDKTWDELSEDWECPVCTKGRSYFGKISTVYYEEDEKIAEDIVENESKLNTEK
EGDLNYLSTYLRRDDEVEKHMDIIHEMAVTGKSIIEPMRTKLPVISWDDILIMGAQLNPLPLNEHDEVNT
TTIIGKKAKKPMIIENPVYISHMSFGALSKELKIALAKGAAQNKTAMCSGEGGILPEEKEASYKYIFEYV
PNKYSVTEENLKNSDAIEIKIGQGTKPGMGGHLPGEKVTEEIAKVRNKPVGQDVISPSCFEEIQSKEDLK
KLIDELREVSEGRPIGVKISAGHIEKDMEFIAYAKPDFVTIDGRGGATGASPKLLKDATSIPTIFALYRA
RKYIDTHGLDIDLVITGGLRISTDFAKAIAMGADAVAIASSALMAAACQQYRICGSGKCPVGVATQDEEL
RKRLHIENSANRVANFLNVSLEELKTFARISGHKDIHDLSVDDLYTVNSEISNYTNIQHV
>gi|260686127|ref|YP_003217260.1| metallo-beta-lactamase superfamily protein [Clostridium difficile R20291]
MERLKIQVLVDNNTYIDRYFVGEPAVSYYIEIDGNRILFDSGYSDVFISNAEKLNIDLGNLTHVVFSHGH
NDHTRGIQFLENRYDLSTVELISHPNCFIPRKHGEKSIGAPFSAEEIKNIFMYNPKDKPFNLSKNCVFLG
EIPSINNFEKRAKIGKCKIGDLWEDDYVLDDSAIVCKTDKGIFIVTGCSHSGICNIVEYAKRVCGDDRVI
GILGGFHLFELNNRLDSTIQYLDKEEIRMLYPCHCVSFKVKAKMNEILNINEVGVGLTISI
>gi|260686128|ref|YP_003217261.1| hypothetical protein CDR20291_0760 [Clostridium difficile R20291]
MQKSVKKAKVTGSMLAIFGVASVLFSSHAGGGFATGNQETQYYVQYGWTAPLMAILAMIILTATMREVII
MYNNNNCRNYKDLFCELWRPYPKLEIIWEIYYYLMVLIAVSAVIAGAAAVFQSIGVNYFVAVFIIGVVLL
VFTIFGAMLVSKAATAMTIAILVCTLTIFIVGIKAKVPEITEILSNRTSFTPGYIKPILNTFIYAGFQSV
VIPTLAGCSRPLLKNSKEATKAMIISFVMNAIALGLAVTMLMGWYREIIAAGQTTLPTLYVAGQSGNHTI
YIIYNVALFLCLMSTGVTTIFGLVNRFEDHKALSFLSSRMKRRVFTACAIMVVSMLISLTGLSNIVKYGY
GYCGYLGLFTIVIPFLTLGHYKNKKFAKENPEAKWPAELNENVN
>gi|260686129|ref|YP_003217262.1| putative ATP-dependent RNA helicase [Clostridium difficile R20291]
MKGKITMDFKSLGISENTINILKKSGITTPTPIQKESIKLIKEGKDVIAEAQTGTGKTLAFLLPIFENIS
LDINDIQVLILSPTRELAIQITEEAMKLKESKDVSILAAYGGKDIGSQIKKLKGNIHMIIATPGRLLDHL
NRKTIDLSKLKTFVLDEADQMLLMGFKNEVEAILKETSNKKQTLCFSATINSQVKKLAYRYTKNPVVVSI
QKEEITLNNIKQEVVETTDRKKLDALCKVLDEDNPFMAIIFCRTKRRVDNLEEALAIRGYNCQKLHSDIA
QSKRERIMKSFRNLDIQYLIATDVASRGLDISGVSHIYNYDLPETPEDYIHRIGRTGRAGEEGYTCAFID
PKNERMLSEIETAIESKISRRIIEL
>gi|260686130|ref|YP_003217263.1| putative homocitrate/2-isopropylmalate synthase [Clostridium difficile R20291]
MCVISKDRAKEIKIVDTTLRDGEQTAGVVFANREKIMIAEMLSDLGVDQIEVGIPTMGGDEKNVIKHICS
RNLKSDIMAWNRAVIKDVEESISCGVDAVAISISVSDIHIENKLRTSRGWVLENMAKTVEFAKKNGLYVS
VNGEDASRADIDFLTEFINVGKQAGADRFRYCDTVGVMNPFSIKNAIETLYERTNFDIEMHTHNDFGMAT
ANALAGIAAGANYVGVTVNGLGERAGNAALEEVLMALKCVYKCDLNNIDTRKFRGICEYVAQASGRILPT
WKPVVGDNMFIHESGIHADGALKDPHNYEPFDPSEVNLERKIVIGKHSGRAAVINKLSEYEMYISPENAT
KLLNAIRATSIRLKRSLMDKEILQLYCDILAHEKGTTEEEAVRGSYI
>gi|260686131|ref|YP_003217264.1| putative aconitase/3-isopropylmalate dehydratase [Clostridium difficile R20291]
MGDNIVYKIIKKHIVDGEAVAGSSIGIKIDQTLTQDSTGTMTYLQLEAMGIDKVKTKRSVAFVDHNMLQQ
GFENADDHKYIQTVADKYGVYFSKPGNGICHQVFLERFSTPGDTLLGSDSHTPTAGGVGMMAIGAGGLDV
ALAMAGGAYYIKAPKVCKVNLVGKLNNMVSSKDIILEVLRKQTVKGGVGKVYEYGGEGVKSLSVPQRATI
TNMGAELGATTSIFPSDEKTLEFFKSQGREDAWIELKPDADAVYDEEITINLDELKPLAAKPHSPDNVDE
VENIGKIKIDQVAIGSCTNSSYEDLMKVAQILKGNKVHKDVSLVIAPGSRQVMEMIARNGALADIISAGA
RILENSCGPCIGMGQSPGTDSVSLRTFNRNFYGRSGTLSAQVYLVSPEVAAVSAIKGVLTDPREFDIKFT
NLDVNEFLIDDSMIIKPADVGSNVEVVRGPNIKPFPLNTELSQSIGGKVILKTEDNITTDHIMPSNAKLL
PFRSNIPYLANYCFNTVDTEFPQRAKDNNGGFIVGGDNYGQGSSREHAALAPLYLGVKGVIVKSFARIHK
ANLINSGIIPMEFCDEKDYENISLLDNLEIPNILDNLGSGILEVKNTTKGTSFKVKVELSAKEVDVLKAG
GKLNYTKNQAN
>gi|260686132|ref|YP_003217265.1| putative isocitrate/3-isopropylmalate dehydrogenase [Clostridium difficile R20291]
MYKVTLIPGDGIGPEVAKAMKKVVEATGAEIEWEEVNAGEAVIEEYGTPLPEYIIDSIKKNKIAIKGPIT
TPVGKGFRSVNVTLRQALDLYVNLRPIKSFKGIKSRYEDVDLVVVRENTEDLYAGIEHKIGDYAAESIKI
ITRSASERIVDFACNYVKDNKRKKVTAIHKANIMKMSDGLFLDVFREVASKHGVEYDDLIVDAAAMNLVL
NPENYDVMVMPNLYGDILSDLGAGLVGGLGIIPSANIGKDCAIFEAVHGSAPQIAGQNKANPTALIQSSV
MMLRYLGEYENAQKIETALEKVFLEGSKLTVDLGGSASTTEFADEVCKYIV
>gi|260686133|ref|YP_003217266.1| MarR-family transcriptional regulator [Clostridium difficile R20291]
MVGSVEVCLIKTLDSNILREVGTLSRAVNSINDIKYKELKLQKGQFTFLTRICENPGINLVELSNMLKVD
KATTTKAIQKLIKAGYVDKKQDEFDKRGYNLTPTDKSLEVYELIIEEENRSIEICFDNFTDEEKQVVTKL
LEKMSKNVENEWFKVKR
>gi|260686134|ref|YP_003217267.1| putative acetyltransferase [Clostridium difficile R20291]
MIRKANMNDLESIMKIIKSTVEEMKTYNNTQWDENYPLEKDFVSDIKKQDLYIYEVDGEVAGFICLNYEE
PEEYLGLNWSSNKKAMVIHRMAVNPNFRKTGIASKLVDFAEKLAVENNVSYLKSDTYSINSKMNLLLTKC
GFIKIGEMSFLGKEKSFYCYDKIL
>gi|260686135|ref|YP_003217268.1| putative reductase [Clostridium difficile R20291]
MKGMIYMIGFLKKRRSIRKYKDVEVEKEKLDKILKAALLAPSSKGLRTWEFIVVDDKEKLINLSQCRTKG
GGFFLKNAPLAIVIIADKEKNDVWIEDASIAASYIQLQAHELGLGSCWIQVRNRMYDDNIEADKYIREEL
KVPSKYSVECIISIGYSDEEKKAYNDSDLDYKKVHFNNF
>gi|260686136|ref|YP_003217269.1| putative DNA-binding protein [Clostridium difficile R20291]
MGIFKTKMDEDWKVNYIKEFNEMRDSYESKLQKKQFEVDSLKSELDRLRSYKNSLKPKEKQITDDDINNI
KSLRRDGLSYKEISNQTSWSKATVSRVLNGLYD
>gi|260686137|ref|YP_003217270.1| putative membrane-associated CAAX amino terminal protease [Clostridium difficile R20291]
MKYSYKKCIIDSILLMFIIQILRMILNYVLLSQFEFTLENFNIINLISFTLVGLSLILFLKDNSLYNKVR
NRKITEAFEENKNNILIEKCKLILFVVVLSLAIIVTYCTKGYVLFNVTMMTLSVLIVPIFEELFFREYIW
NYLSNFIKSKSKIICITSILSGIYNIGYIDVIRNYVILYNNSSYTFEVIISKIMIGTVFGIVLGLVKYRF
RDVGFCILLRSLFAIFIR
>gi|260686138|ref|YP_003217271.1| putative hydrolase [Clostridium difficile R20291]
MKFVTFCSSNEEKIGVFNSETNSIYEINSLGLSKLYTDMNDFIENVSTGDLEKIKNNSFENAKCYKLEEV
KLCSPIVRPKKDIICLGLNYKDHVNEIPDGVIKNVVMPDYPIYFSKRADKIIGVDDKISLHGDLVEKLDY
ESELAVIIGKEGINISKEDAYEYIFGYTIVNDISERALQDKHVQWFRGKSLDTHTSMGPCIVHKEEFEHP
LKLDISSVVNGEVRQNSNTEYFIFDIPTIINDLSRGMTLKPGDIISTGTPAGVAMGMNPQVYLKHGDIVE
CKVEGIGVLKNIVD
>gi|260686139|ref|YP_003217272.1| putative formyltransferase [Clostridium difficile R20291]
MARELELKYGCNPNQKPSKIYMKNGELPIEVLNGKPGYINFLDAFNSWQLVKELKEATGLPAATSFKHVS
PAGAAVGVPLSDTLKQIYFVDDLELSPLACAYAMARGADRMSSYGDFIALSDVCDKETATIIAREVSDGI
IAPGYTDEALEILKGKRKGNYNIVKIDENYTPEPIETKDVYGITFEQGRNEILINEELLKDIPTANKIFT
DSAKRDLIIALITLKYTQSNSVCYAKDGQVIGVGAGQQSRIHCTRLAGNKADTWYLRQHPKVLNLKFKKD
IGRPDRDNTIDVYLSDDYMDVLADGIWQNFFEEKPEPLTGEGKRAWLKTLTGVALGSDAFFPFGDNIERA
KRSGVSFIAQPGGSIRDDNVILTCNKYNIVMAFTKNRLFHH
>gi|260686140|ref|YP_003217273.1| hypothetical protein CDR20291_0772 [Clostridium difficile R20291]
MALNIRNYSLLCNQGTAKFNEDVVGINPFGAWVLDGATGLNGKNLVSNESDARWYVQWWNRYLYKNINKE
ESLKSIINTGIIEVKKEYELRLNGFKVEKLDLPSSSIVVVKFHENKVEYFLLGDCALFIKNGDSKVIKDR
SICKFDNTVFDEMSKLSNLEEMAFDEIRTSVMDTIVSNRLKKNTKEGYWILDFDEEAVENSIYGYIEIKK
DFQLMLTSDGFTSACDRYNLIKEEELIRIAEKFGIGYIHNKVRDFEDNDYKAVKVPRFKIKDDSSCLYLD
IYND
>gi|260686141|ref|YP_003217274.1| putative glycosyl transferase [Clostridium difficile R20291]
MKILHIITQKPNSTGSGIYLSGMIKGFEKIGHKQAVIAGIDVNDDVNCFPSEVSFYPVKYNCGELNFPVV
GMSDSMPYESTRYKDLNIDMINRLKYQFKVNIDKAMNDFKPELIICHHLYLLTAFVREIVKDIKVMSICH
GTCLRQLNTIDLEKEYIIANIRKLDLIFALHENQKYDIIKTFGVSESKVVVIGSGYNDDIFYNKNYKIKD
DKIKIVFAGKICKSKGLIPFIKSISKLKYSKDLIEVNFAGTGSDIESYNEIVKLASKSPFKMNFLGKLEQ
RDLAELFNRSQIFVLPSFYEGLPVVVLEALSCGTDVITTDILGVKEWIGSEINNSGKIEYISLPFMEKEG
IPKDEELYDFENNLYNAIDSKIQSLLNNSNEKTSVDMSKKTWDGLAYRINEVILMDELCLV
>gi|260686142|ref|YP_003217275.1| cell surface protein [Clostridium difficile R20291]
MRISKKVLALGISALLLSVSFPTSINALDKIENIQGVDKYETAGLISDKQDFTTAVLINADSTMVDGIAA
SGLAGVNNAAILLTNKDDIPEATLQRLNRVTKIYVIGGENSISKDVEKMLLMRRMQVIRIDGVDRVDTSY
KIAGEIEKIKNSDKMFLVNGFKDEADAVSVASVAYRDGAPIILTKDIPSAEEDTDLDPWFGVSPVPVYAI
GGESTLSDYIVSRYRATRIGGVDRYQTNKNVIEKFYNGAKEFYITSGDDLVYALVASPLAKNAPVVLVSN
KSDKSILSGASKVTAIGISDKSIIEQCLDAVKK
>gi|260686143|ref|YP_003217276.1| putative nuclease [Clostridium difficile R20291]
MDRKRELKQLYKEMKFDTGVFIIKNDITKKIYLGKSNDIKSKFNSLKFQLGAGSCMIKELNNEWKKYGEK
AFTFEVLELIKHDDNKTEKDYLEELDILEMIWLEKLKEDNTYEIYSI
>gi|260686144|ref|YP_003217277.1| hypothetical protein CDR20291_0776 [Clostridium difficile R20291]
MIIMNKKIELIGNFASDWIRYSDYEYKITEEDELYIVPTEDAVFTMYNPFDVADDIIVDIIRIGQEALQD
ISKETKEMKLKKEVLEFVKKYGLLGLIYSSVYNRDIVGEERVLMIEKNYITKENILSTDEYVNMFIPFAS
DEDVYFKKYRRGIDVSKREESPKFFGKRPLILDLVFSKFYTEQLDWIVSFAKDMCKHFNQICVYKNTSNL
LTESVTIMSGGFNPQKIGFSISQLDKPIIAWEFDSLKTAIETIYAFAITSEPSSLNKCKYCGKIYIPTNS
KSQYCSPSCRNCSNVKKSRSRAKKDK
>gi|260686145|ref|YP_003217278.1| hypothetical protein CDR20291_0777 [Clostridium difficile R20291]
MKKIKKENLKMISPIILSSINQNLKEIERNELLETNIESGDYGLALSESDVKDIINSRDNTLKGYGRIEL
DIKVTKQLIENIYTSQYTNVDNYLEAINDMQEIFYYLKNETDDKICDDEIIEILGEFYEKFSGNMDNVRG
EADEFAKKFKFGEV
>gi|260686146|ref|YP_003217279.1| hypothetical protein CDR20291_0778 [Clostridium difficile R20291]
MLNNLSNININENNLIKNQYSISLLKECLNCKVIDEREVYNIQQEISLILMDLIKKYTNGQSTSVKTEVA
EKLLISIWYAIDAYINKLGDIEKRVVELTAKNVKKVYLGGIEILEEELVRLKDFYKLMMSRKLDTNSIAY
NDTLMELSSFFKSYIVKFEAQDVPVSIDYPLALDDMDVKGIYYVKNYIESIDIENRFCNLFKKKDREKLF
YDYGVIYKIDCDVILVNLFELIINNCIFSTILGNEVINLEISKYEYEFLEKQFKNMYNNITEDKVIGSEE
SNIIELIEVDDSFNTEVDSNLDYNDFEEINREIRINKKITLLLMEAIEVLIKRLSIEDEDVIRYIKKYEK
IFIESVLSSIKSNTFKSMVTVSKNKNEHLEDYIVDDESKLDDESFREIFNEILDSTSIIEKIRIIKENIN
AKKDFIDILESECLFGEEYLMLFASLSELELAILGSVVFYEDIRMREINILEFMLNEKTETTLWKTEYIK
FMKRQSEDKIYSIEEHMNKIN
>gi|260686147|ref|YP_003217280.1| putative aminobenzoyl-glutamate utilization protein [Clostridium difficile R20291]
MKEYIINNVEEIREELIDLSKKIWENPELAFEEKYASSIQKEYLKSKGFKIEEVENLPTGFIASFGEGKP
VIGILGEYDALPELSQCVSAERKPLVEGKAGHGCGHNLLGVAGVGAVVSIKKLIEENKFNGTIKYFGCPA
EEEGGGKTVMCINGCFDDVDCAFTWHPFDINAPWRGGSLANLSVKFKFKGITAHAAQAPHNGRSALDAVE
IMNVGANYLREHVIDSIRMHYVITNGGGRPNVVPGFAESWYFIRGKKARDAEHVLDRLIKVAQGAAMMTE
TEMEYKVTDGIYDYIPNQCLTDLVYDNMVFVGCPKNTPEEEEFAKKLCDTLTREERLGVATSLQNDKSIV
ESYIHKEIVDGDKDKGLAGSTDVGDVSYVIPVAQFAMAAWPVGIASHTWQSCSSAGSNIGFSAMINSAKV
LACSAYDVFMNTKIIDEAKIEFDKSLDGQKFKPLV
>gi|260686148|ref|YP_003217281.1| hypothetical protein CDR20291_0780 [Clostridium difficile R20291]
MREKVEKVLEEKIKPVLQRDGGDVELIDVNENGVVLVRLQGACSGCPGATMTIKAIIENVLVSEVPGVTQ
VLGV
>gi|260686149|ref|YP_003217282.1| hypothetical protein CDR20291_0781 [Clostridium difficile R20291]
MNYKLILAIVFITSALIFYTIGVFGERKAKILKKKHVIIFWLGFIFDTLGTFTMSNIANSHTFEVKSALS
QNLHSITGLLAIVLMLFHASWATFVLYKDDEEKKKFFHKFSIVVWTIWLVPYFIGMFIGMVG
>gi|260686150|ref|YP_003217283.1| MarR-family transcriptional regulator [Clostridium difficile R20291]
MILLKSNYDCFRIAMLLKELYSKTMYTVEENFKENGLTHQQIIVIKLVAHNQELTISQLCDEMSLAKGTV
SGIISRLEQIGYIEKFKKSNDKRNTYVKFTTTGFEFATNFKIKMQESFDDIFKNCDENELSDLVKNLRNI
LAKVKER
>gi|260686151|ref|YP_003217284.1| oligopeptide ABC transporter, permease protein [Clostridium difficile R20291]
MLLCGFFIATKGGWGLLKDILKKLLQFILVMFLLSFIVFYMARLAPGDPLISYYGDGVERMSTQEKENAM
KKLGLNEPIYSQYIKWISNASKGEFGISFKYKQNVTSVINDVYINTIILGGSGYILTFVLALLLGIFCTL
HEDKLIDRIICKLGTITNCIPSFWVALVLILIFSINLSILPSSGAYSMGEESSILSRISHLILPLTVLIL
SHLWYYTYMIRNKLLEEIREDYVLLCKAKGLNNRTIVFKHCLRNIMPSYISIMAISIPHILGGTYVVEKV
FSYPGLGTLCFESAKYHDYNMLLVLCLITGALVVFGNMLAQIINNKIDPRMKYDRGDTNEATI
>gi|260686152|ref|YP_003217285.1| oligopeptide ABC transporter, permease protein [Clostridium difficile R20291]
MILMKPQYSDFEIVGENYILVAEDEHIETKKTLSKKIKELPYISIIILSIIVIGSVFSSFIMTHEPTYMD
LASSNLAPNKTFLFGTDSMGRDIYSMIWYGGKISLFIGLFSTVISTVIGIVYGSISGSASELVDDAMMRF
TEIILSIPSILIIIFVQAILGNSNPVSMSIVIGITSWMNISKIVRTEVRQIRNSEYILAAKSMGGGFFYV
LKQHLLPNFVASIMFMVVTNIGAAIGTESTLSFLGIGLPIEIVSWGSMLSLSEEALLSNRWWIILIPGIF
LVTTLVCITNIGNYIRKNNNKKSSNL
>gi|260686153|ref|YP_003217286.1| oligopeptide ABC transporter, substrate-binding lipoprotein [Clostridium difficile R20291]
MKLKKLKVLSLVMILSLMAGCSSGGDKDKKADTPKDGKVLVYGSNDYTSINPALYEHGEINSLIFNGLTA
HDENNKVVPCLAKDWKFDEATNTYTFNLRDDVKWHDGEKFTANDVKFTIETIMNPDNASEIASNYEDITK
IDVVNDNTIKITLKAPNTAMLDYLTVGVLPKHVLEGKDIATDEFNQKPIGTGPFKLEKWDKGQSITLVKN
SDYFVKEPGLDKVVFKIVPDDKAKAMQLKSGELDLAQITPKDMSNFEKDEKNFKVNIMKTADYRGILYNF
NSKFFKDKKAKGLPNALSYAIDRKAIVDSVLLGHGVPAYSPLQMGPYNNPDIEKFEYNPEKAKQEIEKLG
WKLGSDGIYEKEGTKLAFEITAGESDQVRVDMAKICAQQLKEIGVDAKAVVVTETDWANQDAHLIGWGSP
FDPDDHTYKVFGTDKGANYSAYSNPTIDKILQKARETEDKDEKLKLYKQFQVEMTKDMPYTFIAYIDAIY
VGKPNIKGLTPDTVLGHHGVGIFWNIADWTIE
>gi|260686154|ref|YP_003217287.1| oligopeptide ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MEHLLEVNNLSVSFKVEEGEVQAVRNVSFNLKKGETLAIVGESGCGKSVLCKSLMRILPYNGYIKNGEVL
LKSSDLVKKSEKEMEDIRGKNISMIFQDPMTSLNPTISIGKQIAEAVIIHQGISKSEAKKRAIELIELVG
IDNPEKRFKQFPHHFSGGMRQRIVIAIALACNPDVLIADEPTTALDVTIQAQIIDLIKDLQHKIGLSIIF
ITHDLGVVATIADRIAVMYAGKIVEIGTVEDIFYDPRHPYTWGLLGSLPTLDSQDEYLYNIPGMPPNLLN
PPKGDAFAIRNKNALKIDYEKEPPMFKINDTHSAATWLLHPDAPEVDVPVRVNCGRVISNE
>gi|260686155|ref|YP_003217288.1| oligopeptide ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MNREKILEIKNLKQYFHLDKSTTVKAVDDISFDIYKGEIFGLVGESGSGKSTTGKTIIRLHESTGGEVIY
KGNCISDKKTYKFIKKDVNKSMQIIFQDSTSSLNPRMTIADIISEPLKIQGICKNKTDRMNKVYEMLKLV
GLDRSYANKYPSDFSGGQRQRIGIARALSVDPEFIIADEPIASLDVSIQAQIVNLFKKLQQEKNLTCLFI
AHDLSMVRHISDRIGVMYNGKLVELADSNELYNNPIHPYTKSLLSAIPVPDPRYAKSRNRIEYNSNGYDC
SNEKSLSWIEVSDGHFVYSSKSEINKYQQNLKVV
>gi|260686156|ref|YP_003217289.1| sigma-54 factor, interaction domain-containing protein,transcriptional regulatory protein levr [Clostridium difficile R20291]
MIYKKDKVMKVLESSYRENEKGITANQLSEKTGIARNNISTYLNQLFNEGMVTKIKGRPVYYIPANLNLN
KNELLDTQSELLGIKKGTKVENKIKKDSFETLIGKEHSLRPIIEKCKVAMLYPTNGLHTIIYGETGVGKS
MIARYMYDYSIDSGIRKNKAPFVTFNCADYANNAQLLMGHIFGVEQGAYTGAESSRKGLLEIANGGILFL
DEIHRLPAEGQEMLFTFIDKGTFKRLGDATKERDSKVLIICATTENPTSTLLDTFNRRIPMKIEIPSLRD
RTMIERMELVKNFFKEESKSISISIKVHKEIIKSLLLYDCKNNVGQLQNDIKLAVANGYLRYKRDNKEPV
YIEKKYFDKSINEVSDDYREKSIKADEVITHGIEYFVFTSLGEEEVINYNDINIINAVNTNLNKSVEMNI
ADASLFNNVKFKSMCESIRQIIKEDEEIDISESIFKSMAIYIKSVLDKSSSTNNIDLNQIRRNNRSEFKT
ALKIVGIIENEFDLFLSIETVAYITLFIVQAKQDEQNKIVNNINIIVAMHGETTASMVKAVGDIIGKCSA
ISFDMKLDKSYDEVIVDFKNLINNIDNKDVLLFTDMGSLNSFDEIIKKEKKCEVRVIPMVTTLTVLEAVQ
KANMGLPLNDVYNSITNTRKYYFGTNEIQNKENLSKTIIIASHVSEGVDNKTRKILEEKMSRYLDGIDII
SVPYKTEKDLSLNITKLKESSNIVAVINEQRINIRGIDYISKKDIDKDENINKLKNIIKISIGYDDVVEG
LKTSLKSSNYNRIFKDIKYVSDELFLVFNIEKKYDKVIGLMMHLAFMVDGLIGNTREIEKLDKEKTLDYH
KSLSKIKDIVSQLDKKYNIEINEKECYQILLILEYAEIIEKDYQ
>gi|260686157|ref|YP_003217290.1| hypothetical protein CDR20291_0789 [Clostridium difficile R20291]
MQDKILRDKKANDPWARMTTRNGFSADEIISSFQKAIRRNMVEEACEFAYELYISSPELEDKLWRRILTI
SVEDIGMGDPSAVIIINNLNQVRKEYSYADGDRPLFFIHAIRYLCACEKDRSSDLLKNIIIKGFAMGKVP
EVMDVALDKHTYRGLEMGRDSFHFLNEASIVIPEKEVDNDYKERYLKILEKYKQEEVIDTAFKFNHWQY
>gi|260686158|ref|YP_003217291.1| PTS system, IIb component [Clostridium difficile R20291]
MNILLVCANGASTGVLVEKMKSFCSEHEKLKTKTINIEATSFENLKSYIEANDTDVVLVAPQIRFKEDDV
VEACKNYKIAVGLIDTKHYGRMDAPSVMKSAIELYKNR
>gi|260686159|ref|YP_003217292.1| PTS system, IIc component [Clostridium difficile R20291]
MEALQNNLRRFLLPIAQKIEKQRHLQAIKEGMISITPIIIVGSLSMLFMALNNMLPEGSAKTLLSENMDT
LLIPNKFTMSLLSIYSAFFIAQALAKKYNLNHVEIGMTAVVAQLVVCGQVVDGVLDTSYLDAQGLFVSIL
VALLVVDITKFMNDKNLVIRFPKEVPSVVNKSFRNLTPMIVCIMLFTAIAAITKNVSGQPLPAIIMNFLA
PAISSVDNVFAVTIILFITQLLWFFGLHGAAITSSIWMPIAATYMAENATLIAAGGDPKYVFTIGFYYGF
LQVTGSGITLGLVYLMSRSKCKSFNSMGKVVILPSLFGINEPVIFGTPIVMNPYMFVPFVFGPVLVGALN
FMALKVGLVGLPIAEPPGFLPPGVAAFLMTLDWKAIVLVFASIILMTLIYYPFFKIMEKEELNKNAELAT
TLDDDSFDF
>gi|260686160|ref|YP_003217293.1| PTS system, IIa component [Clostridium difficile R20291]
MVPEMEEKVFSIISEAGDAKSDVMMSLKEIKKGDYNKAKHLLNSASEKIQTASKHHLELLSNAMNSEDSG
TDFLVVHSEDHYSNALFAHSLVSELVDIFEMMDPRINKN
>gi|260686161|ref|YP_003217294.1| 6-phospho-alpha-glucosidase [Clostridium difficile R20291]
MEKFSVVIAGGGSTYTPEIILMLLDNLDRLPLRAIKLYDNDEERQNKVAKACEILIKEKDPNIEYLATTC
PKEAYTDVDFCLAHIRVGKLEMRELDEKIPLKHGVVGQETCGPGGIAYGMRSIEGVLENIDYMEKYSPNC
WMLNYSNPASIIAEAVRRLRPNSRVINICDMPIGMEHNIARIAGLKSRKHMDIRYFGLNHFGWYTSIKDK
KGNELLPKLVEHIKEYGFINGEEGMKNDKKDSWFETNLFTKEIVKTDLTTIPSSYLKYYLFPDYVVNHSD
VNYTRANEVIDGREKEVFGSCALIEKQGHSKGSGLKIGIHAEFIVDLATALAFNTQERMLLIVQNNGAIE
NIQDDAMVEIPCIVGKDGYEPLSIGKIPTFQKGLIEQQLAVEKLVVDAWIEKSYNKLWQALMLSKTVPSA
TVAKELLDDLIEANKNYWPKLN
>gi|260686162|ref|YP_003217295.1| hypothetical protein CDR20291_0794 [Clostridium difficile R20291]
MAMKWRDYADDVNLFEDFDKTIKPLTDEQRRKNINTLIAYFSKEVPSKIYNLSNDEIKPRDILRGLLNVY
PPKEIAPEILNMLHNLLLIECEERELVDVNDIEEVEEGIAIWRGNITNLRADAIVNAANNKLLGCLQPLH
LCVDNEIHSCAGPRLREDCDKIIKKQGHLEYTGDAKITRGYCLPAKFVVHTVGPIVSGGQPSKEQEKQLL
HCYKSCLNTIKEIDEIKNIVFCGISTGVFGYPKKEAANLAVSRVRLWLKENPEKNLKVVFNVFTEEEEEK
YRRIFK
>gi|260686163|ref|YP_003217296.1| hypothetical protein CDR20291_0795 [Clostridium difficile R20291]
MKNSFKNCISLRNKFIIISIVFLLILLIVSYIFGKLVYNSSVGLEQLIKNEDIVKIFSERKDKPLEKLKN
YKTSELMIQSSNNYKLESLFITSNIKTRDTMILVHGIGSSYYEMLKVAYRYLDKGYNVLVYNQRNTGNSG
GDNYTFGLYERYDLDSLVKFVKNKFPEGRLGVHGFSMGAGTAAMHSEINSKDDKVDFYILDSPYSEMKDA
IRMGVLEKRIPDILINYVVICGDLYNKFKSGFWYSDVKPYESVEKSNVPILFIHGTKDTVCNYQNSKKMY
DLVKHDKKDLWLIEGIGHVDGFEHDSTVYFNKIFKFIDSNVLSDKS
>gi|260686164|ref|YP_003217297.1| hypothetical protein CDR20291_0796 [Clostridium difficile R20291]
MKNKNNKDKNMLNIKVLRVLGVLLILFDYTGDTLNFYNFFAKPLVSGNLYKTTGTDCIVFLLFIVECVYL
VGRYILKVKINWSEIIENEKGNFINNLLVEKIQEESNIVYNLLNSYVLPHIYKKARVLMFKTYHMLIYIK
EKYYYVNIY
>gi|260686165|ref|YP_003217298.1| hypothetical protein CDR20291_0797 [Clostridium difficile R20291]
MDSLSSLTPVEVAELLKITKNTVYELIKRGELPSYKVGKKIRVDTKDVEEYINSQKTGKVKDTHFNNKNI
DINNNFKIIISGQDVILDILARSVEKKLDGISTFRSYIGSYNALYELYNGRVSIASSHLWDFETDEYNST
FVKKLLPGIPCVLINLAYRMQGFYVAKGNPKEITTWEDLTKPSITIVNREKGSGTRVLLDGKLRLLNFNG
KHIKGYDNEELSHLGVASTVSRGIADVGLGNEKAALQVNNIDFIPLHKERYDLVIKKEDLQNPVYQTIIN
IINSPEFKAELQGLGGYDLTDTGKTIAKV
>gi|260686166|ref|YP_003217299.1| putative molybdenum ABC transporter, substrate-binding protein [Clostridium difficile R20291]
MCIKFTKREIVMKKILGILGLVACLTLGTVGCNSNEDKTDDGKQEKTTKSSDSVELNISAAASLKEAMAK
IEEEYKKVDSNVKLTVNYGASGSLQQQIEQGAPCDLFISAGQKQMKALDEEKLLVSDTMKDLVKNDLVLI
SSADSSVSGMKDLTTDKVKKIAVGEVESVPAGKYADEVLTNLNLKDKLKDKLVFAKDVKEVLAWVQSGNA
DVGFVYFSDTVNNDKIKVVEKTDEKTHSPITYPVSVIKASKNVDAAKKFEEFLLSESGQKIFEEFGYKKV
E
>gi|260686167|ref|YP_003217300.1| putative molybdenum ABC transporter, permease protein [Clostridium difficile R20291]
MEIVKLIELLVSLFPFKIKEGKMGTDWSPLWISLKTSILSTIITFVIGIFVSYIMANYRGKWKGLIDGLF
TLPLILPPTVVGFFLLLLCGKNGFIGKFLLNFDRTLIFSWTATVISAVVVSFPMMYRTSRSAFEQIDNNM
LSAARTLGLNEWKVFFKIAVPLAWPGIIGGLVLSFARALGEFGATLMIAGNIPGKTQTMPIAIFFAVEGG
DMNKAMMWVMIIVAISIAMILLLNYWSEFQQKIIGKRCG
>gi|260686168|ref|YP_003217301.1| putative molybdenum ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MDIEKDLSSFKLKVEIKQEKGTLGFLGESGSGKSMTLKCIAGLEKPTRGKIVLNDRVLFDSEKKINLSTQ
DRKVGFLFQNYALFPHMTVSQNIELGLLKLSKSEKKEIVARYLDILKLNGFEGRYPWQLSGGQQQRVALA
RALATSPDILLLDEPFSALDHHLRSNMEKELMNMLKDYKGDILFVTHDIEEAYRVCDDIIVYNKGEGLPK
RPKKELFESPKYLIEAKITGCKNISKLNRLDKNTIYATDWGCELTLNREIGDNIEYVGIREHHIKVLDSN
EDLNEKLCFELINIVENPFTYTIYVRKTDLSNECVPIQIELEKSKMRFKKGDRIYLDFPQEYLFCFRYNY
NKKE
>gi|260686169|ref|YP_003217302.1| maltose O-acetyltransferase [Clostridium difficile R20291]
MTEKEKMLSGKGYYANDELLVKEREYCKKLTRLFNNTLEDEYEKREDILRQLFGSVGKQINVEQNIRCDY
GYNIHVGENFFANYDCIFLDVCKIEIGDNVMLAPNVQIYTAYHPIDAQLRNSGIEYGSPVKIGDNVWIGG
GVIITPGITIGDNVVIGAGSVVTKDIPPNTVAVGNPCRVIKKIEE
>gi|260686170|ref|YP_003217303.1| ABC transporter, substrate-binding lipoprotein [Clostridium difficile R20291]
MINKKRLASLILAGALSISMLTGCSQGGDSGNSKQESNSKGKEVKKIGITQLVEHPALDATRIGFVKALE
KNGFKDGENIDIDFQNAQNDMPTTQSIASKFASDKKDLIFAISTPSAQAAFNATKDIPILITAVSDPVAA
GLVKTLEKPGTNVSGTSDFVSVDKGLELLKIFAPKAKTIGVMYNTSEVNSKVQVDALKEYASKNGFKVVE
KGITTSNEVNQGISSLVGKIDVLYVPTDNLVASSMPIVSKIATENKIPVIAAESGPVEKGALACQGINYE
KLGYKTGEMAVKILNGESVSDMPVATSDDTDIIVNEDILKALGMEKPSNENISYVKTKQE
>gi|260686171|ref|YP_003217304.1| ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MLQIKNLSKSFPNPYGEPNTIFENLSIDIEDGEFVSIIGSNGTGKSTLLNIISGLIKESSGQVLLNKHNL
SNLAEHRRTQIVSRVFQDPSLGTCPSMTVRENLSLALNKGKLLNLRKCLRYKRDFLENLLEGVSLDLKKY
LDVQVKFLSGGQRQSLSLIMSCLTSPSVLLLDEHTAALDPKTSNEVIELTNKIVREKNITTLMVTHNLKH
ALHYGDRLIMLHKGEVVLDVKGKEKEQLTVEEILEKFEYAV
>gi|260686172|ref|YP_003217305.1| ABC transporter, permease protein [Clostridium difficile R20291]
MSGIISVMTQSLILSIMALGVYITYKILDFPDMSADGSYTMGASIVAFSLTNGISPVVATLMAILCGCTA
GLVTGILHIKFKISNLLSGILVMGMLYSINLRIMGKSNIPLFSFKHLFNGEISPIVLALAFVFICKVLLD
LFLKTGLGYTLKGVGDNSQMIKSLGINIGSIKILGLMISNGLIALSGSLMAQFLGFSDVNMGIGTLVLGI
ASIIIGITLFKKFTFIKDTTAIIVGSFIYQFTIYFAMSLGMLSTDLKLITAIVIIAFLATGNLNISLKKT
NAKLVPKINQKKEVL
>gi|260686173|ref|YP_003217306.1| ABC transporter, substrate-binding lipoprotein [Clostridium difficile R20291]
MIKSKKILSLIIAGVLGVSMLTGCSQNDGSNASNENKKTDSKKQKNIGISQLVEHPSLDKAKKGFIKALE
DKGYKDGDNIKIDFQNAQNDMPTTQSIASKFVSDKKDLIYAISTPSAQAAYNATKDIPIIMTAVTDPVEA
GLVKSLEKPGGNVSGTSDYLSIDKTLELVKTLTPKAKKIGVIYNTSEVNSKIQVDSLHDYAKKNNYEVVE
KGISTSSEVNQAISSLVGKIDVLYVPTDNLIVSSMPIVSKVANENKIPIIASEEGSVSSGALACCGIDYE
KLGYKAGELAIEVLEGKSVGDIPVTTLDETEIIINEDTLKALDMQKLSADNIKYIKSDENAKSAK
>gi|260686174|ref|YP_003217307.1| ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MLQIKNLSKSFPNPYGEPNTIFENLSIDIEDGEFVSIIGSNGTGKSTLLNIISGLIKESSGQITLDSTTI
TNLAEYKRTQIVSRVFQDPSLGTCPSMTVRENLSLALNKGKLLNLKKCLRHKTNNLEHLLEGISLDLKKY
LDIKVQYLSGGQRQSLSLIMSSLASPKVLLLDEHTAALDPKTSNEVIELTDKIVREKNITTLMVTHNLKH
ALQYGDRLIMLHKGEVVLDVKDKEKENLTVEEILEKFEYAV
>gi|260686175|ref|YP_003217308.1| abc transporter, permease protein [Clostridium difficile R20291]
MSGIISVMTQSLILSIMALGVYITYKILDFPDMSADGSYTMGASIVAFSLTNGISPVVATLMAILCGCTA
GLVTGILHIKFKISNLLSGILVMGMLYSINLRIMGKSNIPLFSFKHLFNGEISPIVLALAFVFICKILLD
LFLKTGLGYTLKGVGDNSQMIKSLGINIGSIKILGLMISNGLIALSGSLMAQFLGFSDVNMGIGTLVLGI
ASIIIGITLFKKFTFIKDTTAIIVGSFIYQFTIYFAMSLGMLSTDLKLITAIVIIAFLATGNLNISLKKT
NAKLVPKINQKKEVL
>gi|260686176|ref|YP_003217309.1| putative carbohydrate kinase [Clostridium difficile R20291]
MLIGTSKLSRNVDTACVEEVGIPMIVLMENAVISAMKNMDIDMYNSYTVVCGVGNNGGDGLGIARHLNTY
GKEVNVFLVGNLEKLSECSKINYNVLLNMGINIININKNDLSEKNYGDENEVDKIIKVEKQNIIKNKNLT
IFKDRVSKSDVVVDAIFGTGLKRDITGIFKEVIDIVNDNSKNTYSIDIPSGIDSDNGNVLGTCIRANKTI
SFEFYKRGFLNYDTSTLIGDVVVEKIGVPDFITRKYHDEEFITDKTFVKNNIRRRDKHGFKSDFGKVSIV
AGSKGFYGASFIATESAVKSGSGLVTLISSEDVQEKVSIRLTEAMTLNFEEERLNKLLNSSDAIGFGPGM
GDNSQTFDKLLKIVENSNCPIVLDADGLNVMKDRCYKFLEWKNRFVITPHLGEMARLTGDSIGYIREHRV
DVAKEFAQKYNLVVLLKGYQTVITDGKKTYINPTGNSCMATGGMGDCLLGMITSFIGQGMDILEATVSGA
YIHGYIGDKLSKAMYTVNATDLISNISLTMKELLDI
>gi|260686177|ref|YP_003217310.1| transposase-like protein B [Clostridium difficile R20291]
MAVVEKAYKFRMYPNKKQQELINKTFGCCRFVYNKYLAKRIEVYKNDKETFTYKQCSSDLTNLKKELKWL
KEPDKFSLQNALKDLDNAYKKFFKEKAGFPKFKSKKINRFSYKTNFTNGNIMYCGQHIKLPKLGMVKVRD
KQIPQGRILNATISKEPSGRYYVSLCCTDVDIEVFENTNNQIGLDLGIKEFCISSCGEFIENPKYLKKSL
NKLAKLQRELSRKTIGSLNRNKARLKVARLQEHIANQRNDFLQKLSTKLIKENDIICIEDLQVKNMIRNR
KLSRLISDVSWSEFVRQLEYKANWHGRQIVKVGKFFASSQICNKCGYKNEEVKDLNIREWICPSCNEIHD
RDINASINILKEGLRLITIQNK
>gi|260686178|ref|YP_003217311.1| hypothetical protein CDR20291_0810 [Clostridium difficile R20291]
MICSLNLYSKTLYKHIIYIGFYNSYEKRVDSMKLIWLIVAVLFGIAEMLTPSLTLIWFSVGAVILIFLSS
FIESIFLQILIFAVISIAMLVVATKKIVKKDKGYKSNTNLQAMMSKKGIVTEEISPNNTGLVVVEHETWT
AISIDGEKIEKGSTVEVLKIEGVKLVVKKVDATVNVTNQ
>gi|260686179|ref|YP_003217312.1| hypothetical protein CDR20291_0811 [Clostridium difficile R20291]
MGTKIVLSIVLIVVVVAISLTCIRVIKQSKVGIIMRLGKFQKVAETGVHFLIPFLDKMAYVIDLREIVID
FPPQPVITKDNVTMQIDTVVYYKVTDPVRYVFEIANPIAAIENLTATTLRNIIGELDLDETLTSRDIINV
KMRTILDEATDKWGIKVNRVELKNIMPPQDIQVAMEKQMRAERERREAILQAEGNKSAAILQAEGEKQSA
ILTAEAKKEAMVRVAEGEKESAILVAEGEAEAIRQTAIAKAQGEAEMIKRTQMATAEGLKLVFSAMKEAD
IDNNILALKSMEALEKMAEGKSTKLVLPSEAVNFLGTFKGIKEVMSDDNKEVLDIKEVLNDNESLKK
>gi|260686180|ref|YP_003217313.1| glucose-1-phosphate adenylyltransferase [Clostridium difficile R20291]
MKKEMLAMILAGGQGSRLGVFTKRIAKPAVSFGGKYRIIDFVLSNCSNSGIDTVGVLTQYRPLILNSHIG
MGSHWDLDRINGGVYVLQPFMNEKEGNWYNGTAHAIYQNMDFVDTYNPEYVLILSGDHIYKMDYSKMLKF
HKEKRSKATIAVIEVPWDEASRFGIMNTNEDSSIYEFEEKPSEPKSNLASMGVYIFDWKMLRNYFKEAEK
NPEINYDDFGKNLIPKMLEDNVGMYAYPFKGYWRDVGTIQSLWDANMDIIKSPETLDLADPKWKIYTNTM
AMPPQYIGKNANVHRSMIADGCRILGEVGNSVLSHGVVVGKGSKVIDSVIMPNVVIGENVTIEKAMIGEC
ATINDNVQIKNVNNEINVVSEYENIEPRCVLIEGGL
>gi|260686181|ref|YP_003217314.1| glycogen biosynthesis protein [Clostridium difficile R20291]
MRNECLGIINLNKKGDPAINKLNYGRPIASTPIAGRYRIIDFALSNMINSGITKVGIFAKEKYRSLTDHI
GSGKDWDLSRKKGGLSIFSPENTKYRNTYSHREGDIYTILANLDYIEKSEEEYILIAPSYMLCNLNYSQA
LEYHKKSHNDITIIYKNVNNANKDFAGNLTLNLDSNNRVINVGNNLGKFPRANICMETYIMKREDFVECI
YNIVNKGSYCYLEEFIIEEAENMKIGAYEYTGYLKCVNSVESYFEMSKDLLNLEVADELLYSERKIFTKE
KNESPTIYTDSAKVENSFIASGCLIEGTVKDSIIFRKVNVEKGTVIENSIVMQNCVIKSNAKLYNAILDK
NTSVSNGKELRGDEKYPLVVEKNTNI
>gi|260686182|ref|YP_003217315.1| glycogen synthase [Clostridium difficile R20291]
MKVFYVTAECWPFAKTGGLGDVSYALPKELKKEGVDVRVIMPKYSTIPSYLKDQLKEIAVFSVRVGWRNQ
YCGLLEMELDGVKFYFIDNEFYFRREDERKSIYGYGDDAERYTFFTDAVLEAISRIDFYPDVIHINDWHT
GMLPLILKERYATLEGYKNIKTMYTIHNLQYQGVFDKHVLYDILDLPQKYFDNRDIEYYGSINFMKAGIN
FADKIITVSPTYANEIQTSFYGEQLDGLLRKESGKLKGILNGIDYDLNDPAKDKDIFVHYDVDSIDKKVE
NKLRLQDILGLKKDSSIPLIGIVSRLVSQKGFDLIAYMMPELMREDLQIVVLGTGEHQYQSMFNYYDSNF
SDKVSARITFNASLAQQIYAASDMFLMPSLFEPCGIGQMLAMRYGSLPIVRETGGLRDTVTPYNKFTGEG
NGFSFKNYNAHEMFFCLKNAIKVFKDKEKWIKLVENAMKTDNSWKKSAKEYIETYRDICD
>gi|260686183|ref|YP_003217316.1| glycogen phosphorylase [Clostridium difficile R20291]
MIKGVVFLVTISKKKFKQKFEVKMYSLYAQSIKEATDEQLLNVLCSLLKDEIAKKWVATKLDKKKEVYYF
SLEFLIGRQLKSNLLNLNIEEEVREGLSELGINLDDLIEAEVDPALGNGGLGRLAACFLDSMASLNISGQ
GYGIRYKYGLFEQKFVNGYQVEVPDNWLTEGRYAWETVRPNEATMVKFGGEVELIKEGSHLKVIHKNYLP
VMAMPYDIPIIGYQNQCINTLRLFKSEIPKRDFGELTSNALNYSGSYEEALKHKYYTEEISQVLYPDDSN
YAGKLLRLKQEYFFVSAGIQDIIRKYKKNKLNIDNLFDKVAIHINDTHPTLCIPELMRILLDEENLSWDE
AWEITKKTVSYTNHTIMSEAMEKWPVSMMKELLPRIYMIIEEINRRYVEELNNKGYEQDRIKRMSIIDCD
NINMANLCIVTSHSVNGVAKLHTHILETEVLKDFYQDEPNKFNNKTNGIAHRRWLISSNPQLSNLITDLI
GDSWKKDTLQLKNIEKFKNDSSVLQRLDDIKYNNKANLAKFIKDKYDLNVDPSSIFDVQVKRLHAYKRQL
LNIFNVLHMYHELLDNPNLNLDPRTFIFGAKAAPGYYLAKCIIKFINSVASTINNDVRVKDKLKVVFLEN
YGVSLAEIIIPAANVSEQISTTTKEASGTSNMKFMMNGAITLATLDGANVEICEQVGKENMFLFGLSAEQ
VLNYNKYGGYSSLDLYHSNMDIKRVVDDLINGFIPNLGEEGRSIYNSLTTYNDEYFVLRDFENYGQAQAD
INRLYRDKEKWNKMSLVNIANSGFFSSDRTISEYAKDIWFKRV
>gi|260686184|ref|YP_003217317.1| putative alpha-amylase [Clostridium difficile R20291]
MQSVIEYNSWDKNFKAPFGALKFDEELTICVKVNEGYNIKSISLEINREEEMRTITLNEELDNDKLGKCF
CGKIEKFDGTGVYFYYFKVDVEMDGQIKTLFYGKNRDNGYSCEYNYSDINKYQITVYKDFKVPTWYKEGI
LYHIFVDRFNNGNRSGKVDNPKKNSFIYGNWEDIPMYIKDSQGDVIRWDFHGGNLRGIINKLGYLKKLGV
SILYLSPIFEASSNHKYDTGDYKKIDPMFGDEDTFKELIDKAKEKGISIVLDGVFSHTGADSKYFNMYGN
YNSLGAYQSKESPYYSWYMFEEFPQKYKSWWDVKTLPNINELEHSYMDYIIYDNDSVINKWVNMGIKGWR
LDVADELPTKFIRELKKELKKADDDSILIGEVWEDASNKISYGQRRSYLLGEELDSVMGYPFRNNMFSFL
KGEINSYELCNRYMQIKENYPKESFRSNLNLIGTHDVTRAKTELNDDVDLVKLAVAIQMTFEGVPYIYYG
DEAGLCGGVDPDNRRTYPWKNEDEDMLNFYRDVIKIRNKNKLLSSGNTEFIYTNNDSVFSFIRVDENNDR
MLILVNRSENVESISLCIESSFIEEIPIKYSLKNANSTIQIENNELKVDLDSKSFRIFRVN
>gi|260686185|ref|YP_003217318.1| GntR-family transcriptional regulator [Clostridium difficile R20291]
MEERLMKVDPLTTQVYDYISKKIQNGEYEANQRITESEICKSIGVSRTPAREALTRLAGENLLEKIPNKG
FVVKEFQEKEKLDTYSVIGVLDALAGSSALQNLTESDLVKMEELTEMMAVSIKYKNYNSYLKLSNEFHDI
YITKSDNQVLVNLLNSLRYNFMSKSYTSDNEDELYKMLTYSNNQHIEVVKFMRENDLENVERVLREHWKT
IPIAEMKKEKLL
>gi|260686186|ref|YP_003217319.1| arginine decarboxylase [Clostridium difficile R20291]
MDSEFANAVELSYECAPLLESLKEYSEKDIACFDVPGHVKNRGVAILNKYLGESLMKMDINSSPTMDNVS
APNGIIKNAQDLLAQAYMADEAFFITNGTTQAIHAMILSVIKPGEKVLLPRNIHKSVINALILCGGIPIF
IQPEFDEKLGISLNITLEKVRTEIEKDCNIKALFFLNPTYYGVCADLESIIELCHKNNVLVLVDEAHGAH
FPFHLDLPPSAISLGADMVAVSIHKTGGALTQSSALLLNRDNVSFEKVLQSINMLQSTSASYLLMASIDG
ARVNLVENGEKQLSKALNLSRYAKSKLNKIDGIKVLSTEILKQKGVKFIDETKLCINVKELNLTGFEVYD
LLYKNFSIQVELGDSYNILALVSIGTNKSDIDRLVKALSIIAKIYRKESTLNEFNMVQINPIIKLNPREA
FYAPKESVEINSCIDRICGESIMAYPPGIPIIAPGELITEEIMEYIIFLKNSNAYLTDVQDKNLDRILVI
K
>gi|260686187|ref|YP_003217320.1| S-adenosylmethionine decarboxylase proenzyme [Clostridium difficile R20291]
MKFETLGRHILVEYYNCDENVLKDPRLIENFMNDSALNAKATIVDSVFHHFNPWGVSGAVIIAESHLTIH
TWPEYGYAAADFFTCGDIDPWKSFELLEQLLKSERSESTEIPRGLTTKIKKYSKKDLGKITHKPEAV
>gi|260686188|ref|YP_003217321.1| spermidine synthase [Clostridium difficile R20291]
MELWYTEEWTENVRFSIKVNKHLFEGKSQFQRIDVFDSDEFGKFLTIDGLMMVTYKDEFIYHEMITHVPM
ATNLNIKKVLVIGGGDGGTVRELSRYPQIEKIDMVEIDKMVVDVSKEYMDICSCKLDDKRVSLYFEDGVN
FVKCAHDKSYDLIIVDSTDPIGPGEGLFSTDFYKDCYRILTDDGILVNQSESPYFDFNAKEMKRANKKLK
QIFPISEVYQAHIPTYPSGHWLFGFASKKLNPVKNQDRNGWEKLSLKTKYYNSDIHLGSFMLPQYVKEML
DEE
>gi|260686189|ref|YP_003217322.1| putative agmatinase [Clostridium difficile R20291]
MNTFMSMDKNYEESNLIVFGVGFDGTTSNRPGARFASSSMRKEFYGLETYSPFLDLDLEDYNICDYGDLE
ISVGSTEQVLKEIYQETYKIVRDSKVPFMIGGEHLVTLPAFKAVHEKYNDIYVIHFDAHTDLREEYNNSK
NSHATVIKRIWDIVGDNKIFQFGIRSGTKEEFKFATEEKHTYMEIGGIDTFENIVNMLNGKNIYLTIDLD
VLDASVFPGTGTPEPGGVNYREFQEIFKIIKNSNINIVGCDIVELSPDYDTTGVSTVIACKILRELCLII
SDKIK
>gi|260686190|ref|YP_003217323.1| cold shock protein [Clostridium difficile R20291]
MKNGIVKWFNNEKGFGFISVEGEDDVFVHFSAIQNDGYKTLEEGEKVSFDITQGNRGPQAENVNRI
>gi|260686191|ref|YP_003217324.1| iron-dependent hydrogenase [Clostridium difficile R20291]
MVSYKIIYGGGIKMFQFETQIHKLRHDVLTAIARLGKEDNLTREAMDNIQYEIIKGEKPTYRCCVYKERA
IISERVNVSMGLQPGQDKIDLDTMDIEEDEQIIYILEAACDSCPINEFTVTDICRGCLAHRCKEACKFGA
ITHVGGMAYINHELCKACGMCKKACQYDAISEVVRPCKSVCPTNALGFDRENMKAMIHEDKCLNCGACMS
ACPFGAISDKSLIAPVARKLVQKEKMYAVVAPAITGQVEANVTYGQIKNAIKSLGFVDVLEAACGADAVT
VHESLEFAERMEKGEAFMTNSCCPGFVGYIEKTYPNHVGKISSTVSPMIASGRFIKSHEPDAKVVFIGPC
TAKKSEAAKKELKGAVDYVLTFEEIMALFEAFDIDLAKCSNEDIDDASIFGRGFGAAGGLTKAIENYLAE
KGIGVNFEPVKISGSREIKKTMTMANLGKLEGNFIEGMMCEGGCINGSGKFLSGAKVKATFDRKNSQSTK
KSVLANTKIKDFSNINLEK
>gi|260686192|ref|YP_003217325.1| iron-dependent hydrogenase [Clostridium difficile R20291]
MFEFETQLKRLKHEVLTAVARLSIEENLTKENIEKIPYEIIKGEKARYRCCVYKEREVVLERAQLALSLT
PNSKYGDINPDSVSLDTDEQIIYIVEAACDRCPINEFTVTELCRGCLAHRCKEACKFGAISYINGRAYIN
HDLCKACGMCKSSCQYDAISEVVRPCKSVCPTGALDFNRNTMKAMIHEDNCINCGACISACPFGAISDKS
LIAPVAKKLAKKENMYAIVAPAITGQIDSNITYGQLKNAIKSLGFVDMIEASCGADAVTVHESNELIERI
KSGDNYMTNSCCPGFFKYIEKMFPDEKDRISSTVSPMVATGRLVKKIDSDAKVVFIGPCTAKKSEATEKS
LKDSVDYVLTFEELMALFEAFNIDLSKCSNEDINDGSIFGRGFGASGGLAKSVQNYIAEKGLSFEFEPIK
VSGPRQIKKTMTMAKLGRLEGNFIEGMMCEEGCINGAGKFLSGVKAKNTFDRKNGQSTKKSVLSNDKIKE
FEDVNLER
>gi|260686193|ref|YP_003217326.1| metallo-beta-lactamase superfamily exported protein [Clostridium difficile R20291]
MKKIVLKDILFLVTTLSIIVILLFVTNITTNSKIKSTSESYLKSDKNSVRQNGIQRSTKNTAFKTTILST
GKSDCILIEIGDKFIMIDTGEDKNGEQIVDKLKEKEINALDYLIKKMQNSMKQEPCDFSHRRFSLTHLDK
DHIGGVDSVLSSVKVKNIIQANYKKDSKQYDEYIDSLKKADIEPVLLKDNMNIVINSAEINIHPASKSKY
ESSNDYSIITNISYGAHKFLFAGDAEEERLSEFINGNTLKYDFVKMPHHGRYDKLTETFLESTSPQYAVI
TCSEKKEPEEGVLKILERLNIKTFLTSSGEVVINSDGKTLSVNQ
>gi|260686194|ref|YP_003217327.1| putative transposase-like protein B [Clostridium difficile R20291]
MIVVEKAYKFRIYPNKKQQELINKTFGCCRFVYNKYLAKRIDVYKSDKETFTYKQCSSDLTNLKKELKWL
KEPDKFSLQNALKDLDNAYKKFFKEKAGFPKFKSKKINRFSYKTNFTNGNIMYCGQHIKLPKLGMVKVRD
KQIPQGRILNATISKEPSGRYYVSLCCTDVDIEVFENTNNQIGLDLGIKEFCISSCGEFIENPKYLKRSL
NKLAKLQRELSRKTIGSLNRNKARLKVAGLQEHIANQRNDFLQKLSTKLIKENDIICIEDLQVKNMIKNR
KLSRLISDVSWSEFVRQLEYKANWHGRQIVKVGKFFASSQICNKCGYKNEEVKNLNIREWICPSCNETHD
RDINASINILKEGLRLITIQNK
>gi|260686195|ref|YP_003217328.1| hypothetical protein CDR20291_0827 [Clostridium difficile R20291]
MAIVDKIFNEIKLMVARLLLGKKYSEYEEKDLVYNTEEEVILITLKRLVFQGNVNEAEEILFDKAKTVTS
ENMQYIAIEFYTMLMEKTDEELEAMNFSKQEVYQGIEDIRKVLNLE
>gi|260686196|ref|YP_003217329.1| hypothetical protein CDR20291_0828 [Clostridium difficile R20291]
MKVGFDHKKYLEEQSKYILERVNNFDKLYLEFGGKLMGDLHAKRVLPGFDENAKIKVLQHMKEKVEVVIC
VYAGDIERNKIRGDFGITYDMEVLRLIDDLRGYELDVNSVVITRFEGQPATTVFINKLERRGIKVYKHYP
TKGYPSDVETIVSDEGYGANEYIETTKPIVVVTAPGPNSGKLGTCLSQLYHENKRGNVVGYSKFETFPVW
NVPVKHPLNIAYEAATVDLKDVNMIDSFHLETYGEMSVNYNRDLELFPVLKKIIEKITGKESIFQSPTDM
GVNRVGFGIIDDEVIRKASIEEIIRRYFKTACEYKKGQVDKGAYDRMKMIMEELNLKPEDRNVVLPARNY
SNKLKESADKNDTCPVVALELEDGTILTGKGSDLMNGTAAVVLNAIKHLANISDDMHLISPVILEPIINL
KTKTLASRNVSLSCQEVLTALSICAVTNPTAQFAMEKLALLKGCQAHSTTILNRDDEQTFRKLGIDVTCD
PEYPSQNLYYS
>gi|260686197|ref|YP_003217330.1| DNA polymerase IV [Clostridium difficile R20291]
MKHYRKIIHIDMDAFYASIEQRDNKKLKGKPVIVGGNPQSRGVVATCSYEARKFGIHSAMPSAVAYNRCP
YAVFVRPRFDVYKSVSEQIRDIFYRYTDLVEPLSLDEAYLDVTKNKKNIDSSIEIAKQIKKDIFREVGLT
SSAGVSYNKFLAKIASDLRKPNGLTVITEENAQDFLDKLPVNKFFGVGKVTSNTLKNLGIKTGYDLRCLN
LFELENIFKKRGYELYKFARGIDDRPVEPNRVRKSVGAETTLSHNLDIDEEETRNILDELCEEVCHRLKS
SEKFGKTLTLKIKYEDFTKITRSLSLEHYIDEYNDIRSGVDNLLRNVEVNGKQIRLLGVTISNLSDKKET
YKDITLFEYMDSIQM
>gi|260686198|ref|YP_003217331.1| glycine betaine/carnitine/choline ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MIEIRNVTKKIGNNVILDDISLVVETGTLVVLIGSSGCGKTTTLKLINKLIKPTSGEIYINGKPISQENE
IELRRKIGYVIQNTGLFPHLTIKENIELIPRLKKEKSVEEIEKRTLQLLEMVGLDSDEFLNKYPSELSGG
QQQRIGVARAIATDAEIILMDEPFSALDPITRTSLQEQLFSLQDELKKTIIFVTHDMDEALKIADKICIM
KDGRIAQYDTPENILRKPANDFVKDFIGEDRVWDNPEYIKARDIMIKNPIAVNSTRTVTQGIEIMRTSKV
DSLLIIDRAKTLKGIVTVKDMKDIDDKSILLADIMSSEPLHVNEGDNLVEILNVMNRNSVGYIPVISDEN
KLVGLITRSSLLSVLSEQFLEMEVSVLG
>gi|260686199|ref|YP_003217332.1| glycine betaine/carnitine/choline ABC transporter, substrate-binding protein [Clostridium difficile R20291]
MFLANFFNFILLQKDKIIELLIQHMSLTVTSILIAIIVGVPLGIIISRISSLRKFVLGFVNLVQAVPSMA
LLGLLVPILGIGSKPAIFMVVVYSLLPIVKNTYIGITSIDPVVLESAKGIGLTRNQTLFKIQFPLALPII
MGGVRISAVTAVGLMTLAAFIGAGGLGYLVFSGVQTVNNNMILAGAIPSCIIALLVDYLFSKIEVAVTPK
GLNPKAPKKNYIALKVISVVVVVSMLFVVFSSSFSSKKDTITIGSKDYTEQLILGNVYAELVEKNTNLKV
KKNLNLGGSSVAFNAIKSGELDMYVDYTGTLLVNVMKHAPIKDADEAYNVVKDTMEKENQLTLLDPLGFN
NTYTLAMMPETAEKYGINTISDLTKYGKEFTFSPTLEFENREDGLVGLSRDYGLKFKDVKAMNGSLRYTA
LDNNESQVIDAFLTDGLIKKFNLKILEDDKNFFVPYYAAPLVREDTLKKYPELEKVMNMLSGKINEETMR
ELNYQVDELGKSPEEVAHSFLVKEGLV
>gi|260686200|ref|YP_003217333.1| putative cation efflux rotein [Clostridium difficile R20291]
MDNYKKVKQVLWIILFANFAVALLKIIIGNQIKSYSMTADGFHSLSDGASNIVGLIGIFFASKPKDKNHP
YGHKKFEIITSLFISGMLFVIAIKIILSAVLRIANPVVPAITIESLIALIITLFINIFVCMYEYRIGTKL
NSYVLISDSLHTRSDIFVSLGVLVTLVGVKLGFPVIIESIVPIIISAFIIYSAYGIFRPSIGILVDRVAV
DEDYIKEIVFEFNEVRDVHNIRSRGSKSSIYIDMHVMVDPFISVEQSHDLTHKIEKQIQEEINENAQVIV
HIEPFYSF
>gi|260686201|ref|YP_003217334.1| aldo/keto reductase [Clostridium difficile R20291]
MRYVEYGKTGKMVSVVGYGGLRFDLEKSNQENADLVKYAYEKGINYFDTAPGYCDDRSEDIFGLAFRQMI
KEGKTDFYVSTKEKPKACDTSEKAIEAVKKSIERLGVSKINFYHVWNIRKMEHYELAMRPGGQYEGLLKC
KEEGLIDHIVFSSHQPGDEVIDILSENKFEGVTMGINILNFPYRLKGAKYAVDNGYGVVAMNPLSGGTIP
KYNKELSFLSKDGESTIESALRFNIGISQISISLIGFNKKQDIDDACKIADENRIYSDEDIHDIETRLNK
NMNEICTGCGYCKVCPKGINTPAYMLFYNEKQMFKKSDEEMTKLVYGLGHWNYTMNSKAKAKECISCGKC
EVECTQHLPIIDRLKEIKKWEEDGANSVKV
>gi|260686202|ref|YP_003217335.1| hypothetical protein CDR20291_0834 [Clostridium difficile R20291]
MDGDILMSKILKYKNEMFLFILVVITYLIITKIFFSKTTIFYNLNNTYDVLLDTDTGVLFNLNVFAISQD
NSKHILFSAIISIFAYPIYLFCTSIANPGTTDFNSAYGFGLICLQIITSAMSITLVFNHIKKIKMQRLTL
ILLTMIMIFSFPQLFMTLNVERFIYSQFSLIFFIVIANKMKGKNSYLVELAAIPLFGITISNIYLYFFNM
IFEFKLKIGKMLKHLITFILMAYICVVSTKSYESFMNLGNVIQYDTKFISGEPILEKIAMIIERLLYSVF
YFPGASIKKGLFLQNGEVATIPVILTLLALCFCVLSVIENSEKRVPKLCMGIIIFNLTLHGIVGYNLVNS
SIMAINFSFAVIILLAYFTKALRKNEKNMYNIFLSLLLVTIVISNVNGFIEILNIGIKSYPV
>gi|260686203|ref|YP_003217336.1| UbiA prenyltransferase family membrane protein [Clostridium difficile R20291]
MKQTNTSIRLLTKISDYIKLMRIKQYIKNFFVFSAIIFSNNILNINLFLNTFIAFVCFCLMSSSVYALND
AIDMDKDKKHPKKCNRPVASGRISKKSANILFVVLALISVCLSTVVSFNLSIILSLYLINNILYSLKLKN
IILLDVFSISLGFILRVYAGCVAISVSLSNWIILCTFFLSLYLALGKRKKEIETLRDDAVEHRKILEDYD
IENLNQMMIVILSSTIVCYSLYSTSNPEKPHMIFTTIFVVYGVLRYNYIINTTNENNPTDIVLKDNALKI
NVILWIITCLIILIF
>gi|260686204|ref|YP_003217337.1| putative hydrolase [Clostridium difficile R20291]
MKKSVLLLDVDYTVINTDSMIDFFIYSLKNKTFKTIIKLPYIIFILFMYLIRMIPLKKAKEAIFYPIVDF
SEEDLKKFFDDCIMKKINESMKKVIYKNKEEDNVIIMITASPYAYMKYFKYYGLADKVIGTEFFYENSRY
KNQFIGENCKGIEKVKRIKAVLGKLGIEIDYENSYAYSDSKSDLPMLSLTKNAFLVSKKDGEVIEQINS
>gi|260686205|ref|YP_003217338.1| hypothetical protein CDR20291_0837 [Clostridium difficile R20291]
MSLRIGGNSLGYLHILILSMVPVTELRGAIPIGIAMGLNPIWVYVFSVIGSTLVSIPLILTFRHVLQFLR
GKKLFKGIADVIDRKINSRMKKLKSVSIIGIILFVGIPLPTTGTWTASAIASILKMRIKDAFMGVFLGNL
LSGVIVSALSLHII
>gi|260686206|ref|YP_003217339.1| putative drug/sodium antiporter [Clostridium difficile R20291]
MENSNTNLGSESVGKLLFKLATPAIIAQIVNVLYNIVDRIFIGRMENGEVAMAGVGVAFPIIIIITACSY
LIGMGGGPLAAIKMGEQNNDEAEKIMSNSFSVLVILAILLTIGFKIGKEPLLWMFGASESTIRYSMDYLN
IYLIGTVFVQISMGMNTFINTQGFATTGMMTVAIGALINIILDPIFIFGFNMGVKGAALATIIAQGVSAI
WVLMFLFGKKSILKIKKKYMIPKASIILPVLGLGISPFIMQSTESLVLIALNSKLQMYGGDLAVGSMAIM
SSIMQILMLPNMGVTQGAQPIISYNYGSGQLDRVKKTFKLCLLSCFTYSTILWLLLMIFPAFFVSIFNKN
PQLLSMTSWSIKIYFAGAFMFGIQIACQQTFLALGKATISLVLALLRKIVLLIPLIFILPTFFNEKLFAV
ILAEPVADITAATITAISFFIFYKCFLSKPKAIKE
>gi|260686207|ref|YP_003217340.1| putative 30S ribosomal protein S1 [Clostridium difficile R20291]
MFIMENDLTMQELLDQQEQVFSKVKVGELTTGKITAVRNDEVQLGLDYGFDGIIPISELNIEKNQYIEDI
YHIGDEITAVITKVSQKDGTITLSKLQLDKRNDFAELQKAYDEHRIITVNVEKNIDKGVFANYNTYTFFI
PISQLDTKFITDTSKFVGLNLEVYIKELDVRKNRLVASHRDVLQERINKEREERRAQIKAEKEAERARIK
QEREEEKARIKAAKEDLFNSLEVGQKRDGKVTKIMPYGAFVDIGGIEGLAHINNLAWTRVESVEDVVSEG
QEVEVYVLDVNKETKKIALALKDINNDPWDLIAKEVQIDDVVNAKVLRIIEKGAFVQIKEGVDAYLPISE
LSDTRVAKVTNVVNIGDEVKVKILDFKPKTKRMLVSIKEATREPEEDITEYLEVEESLGSIGELFKDKFK
DLEV
>gi|260686208|ref|YP_003217341.1| putative phosphoesterase [Clostridium difficile R20291]
MKKSIMDVHCHTLISGHAHSTFKENVEEASKKNIKYLGISDHGPNMPGGPHPFYFYNLHLLPREVQGVKI
LRGIEGNIMDYSGNLDVQEDMLQHLDYIIASLHRPCIASGTKEENTNAILKVMDKPKVKIIGHPDDSRYP
LDYEPIVKKAKDKNILLEINNSSLSSNSHRTGTWENVSHMLTLCKTYGTRVILGTDSHICYSIGEFENAE
KVLEAVDFPDELVINYHEDEIIEFFDINF
>gi|260686209|ref|YP_003217342.1| hypothetical protein CDR20291_0841 [Clostridium difficile R20291]
MNYYDNGYFKKGMTIYMVLALIILATIFIYSTTILYILCIITAVFLFKQGRDFSNKYEGKVYITLDNHSI
LINNQCIFSIKSKQSQKFNYKIIEKIEVVKNILNIYTDESNYKIRLRALSLEDEKKLLNIIDEKMKKFKA
>gi|260686210|ref|YP_003217343.1| 2-isopropylmalate synthase [Clostridium difficile R20291]
MKCGKYKKYDKMQIVNRKWPDNEIFKAPIWCSVDLRDGNQSLPTPMSVNEKVRMFKMLIDTGFKEIEVGF
PSASNTEYTFLRKLIDENMIPDDVTIQVLTQSRAHLIEKTFESIKGCKKAIIHLYNSTSVLQRDVVFNMS
KQEIIDIAVEGAKLFNEEVKKYPETEFTFEYSPESFTGTEMDYALEICEAVIDVWKPTPQKKVIINLPST
VEMATPNVYADQIEWFCKNISCRDSIILSLHTHNDRGTCTAASELGLLAGADRLEGTLFGNGERTGNMDI
VNVGLNLYTQGIDPELDFSNIDKIIGIYEDCTKLMVHDRHPYAGNLVHCAFSGSHQDAIRKGMIAMKNRD
NDYWEVPYLPIDPHDIGREYKEIIRINSQSGKGGAVYIMETDYGFMIPKNMHSDFGNVVKMESDRIGEEL
SSEAIFNLFKKEYIEVESPYKVKKYKIKSMDELNYENDDSNDTNMIEMTARISYMGNEQRIVGIGNGPVD
SFNNALKQCGMKDYKFRYYWEHALEEGSHSRGVAYVGIEHNNEVYFGVSISENINTAAINALMNAINKSY
IEEEIKNGDDYDAENISQTC
>gi|260686211|ref|YP_003217344.1| 3-isopropylmalate dehydratase large subunit [Clostridium difficile R20291]
MVLDHFTPNKDIKSAEQCKFTRSFAKSKGVVNFFDVGDMGIEHVLLPEKGIVTAGDVIIGADSHTCTYGA
LGAFSTGVGSTDMGAGMATGKCWFKVPGAIKFVLKNKPNKWISGKDIILHIIGEIGVDGALYKSMEFCGD
GVEYLSMDDRFTICNMAIEAGAKNGIFPVDDKTMEYINSHKCSTITKDVNIYEADEDAVYDEVYEIDLAE
LKETVAFPHLPENTRTVDEIDKDIKIDQVVIGSCTNGRISDLEVVAEIMKGKKVADGVRVMIFPGTQKVY
LEAIEKGYITTFIEAGAAVSTPTCGPCLGGHMGILAAGEKSISTTNRNFVGRMGHVDSEVYLASPAVAAA
SAITGKISKPSEII
>gi|260686212|ref|YP_003217345.1| 3-isopropylmalate dehydratase small subunit [Clostridium difficile R20291]
MIANGSVFKFGDNIDTDVIIPARYLNIADYKELATHCMEDIDDKFISKVKKGDIIVATKNFGCGSSREHA
PIVIKESGVSCVIASTFARIFFRNSINIGLPILECEEAANNIDEGDNIEVDFSTGVIKNITKEKEYKAEP
FPEFMQNIILNEGLINSIKANRG
>gi|260686213|ref|YP_003217346.1| 3-isopropylmalate dehydrogenase [Clostridium difficile R20291]
MNCNIAVIKGDGVGPEIIDEGIKVLNKICCKFNHRFDCEYVLAGGCAIDEIGEPLPNKTVETCRKNEAVL
LGAVGGPKWDKCKGDKRPESGLLKLRESLGLFANLRPATMYESIKEASPLRTDIVEKGIDFVVVRELTGG
IYFGERGRKIIDGIENAYDVEIYNENEIRRIGKRAFEIARNRNKKLISVDKANVLESSRLWRSIMEDLAK
EFEDVELSHMYVDNAAMQVVKDPSQFDVIVTNNIFGDIISDEASMITGSIGMLPSASLREDSFGMYEPIH
GSAPDIAGKDIVNPIATILSVSMMLRHSFNLEEEAKCIEDAVQSVLNKGYRTIDIYNGVGNVVGTRAMGE
LIVNEI
>gi|260686214|ref|YP_003217347.1| putative thioesterase [Clostridium difficile R20291]
MDFLAKYKVLKKQNSSKSCLVCGTQNELGLKADFYELENGELVSICNTKDWHQSYPGRVHGGMSAAILDE
TIGRAVSINDDQIWGVTVSLELKYKKPVPTDATIKVVGRITKENRKLFEGTGEIILPNGDIAVTATGKYM
KMPIGQIAEGDFSNEEWFFEESKEKVEYIEL
>gi|260686215|ref|YP_003217348.1| putative aminotransferase [Clostridium difficile R20291]
MSKKLFIPGPIDVKEEVLQKMATPMIGHRGKDASMLQKSISEKMQKLFYTNNTILLSTSSGTGLMEGSIR
SCTSKKAAVFSCGSFGDRWYKMAVANNVPADIFKVELGEATTPEMVDKVLSTGEYDLITVTHNETSTGIR
NPIEEIGEVVKKYEDVIYCVDTVSSAGGIKVEVDKIGIDICITSVQKALGLPPGMSICTFSQKAIDRAKQ
VPFRGVYLDLLAMYEYLIKKNYQYPSTPSLSHMFALDFQLDNILDEGLDNRFNRHEDMANLVRNWAKKHF
QIFTNENHLSNTLTVIENTQGISVSNLNSKLQERGFQIANGYGDLKEKTFRISHMGDYTVEDVQELLDNI
DDILGFNK
>gi|260686216|ref|YP_003217349.1| putative D-3-phosphoglycerate dehydrogenase [Clostridium difficile R20291]
MYNILVTDGIEKEAARKLRELDFNVIEQFYEKDVLGDKLKDVDVLVVRSATKVTKDVIDKALEGKKLKLI
VRGGVGLDNIDVKYAQANGIKVMNTPNASSISVAELTIGQLFVLARFINTANVTMRDGKWEKKKYKGTEI
NGKTLGLIGFGRIAKEVAKRAELLGMNVIYTDIMGEAQGFNNYKFCDMEEVLENADFLSLHIPFDKNKGA
VITEKEINKMKKGAYLINCARGGLVDEKDLLKALDEGKLSAAAIDVYEQEPTLNLDLVNHPRVSPTPHIG
ASTVEAQERIGDEIVNVIQDFFLDFNNLIGVAL
>gi|260686217|ref|YP_003217350.1| hypothetical protein CDR20291_0849 [Clostridium difficile R20291]
MATIKPFKAIRPNKYIVDKVAALPYDVMNSKEARRIAEGNPYSFLHIDKSEIDLDENIDLYDEKVYLKAR
ENLYEFRKQEILVKDDKECIYIYKQIMDGRAQVGIVACISVDESLNGTIKKHEYTRPEKEIDRTKHIKYC
DANTGTILVTYKHQRVIDDIINDFMDNNEPLYDFITDDKIEHTVWKIDSDDIIDNLVDKFEKLDYLYIAD
GHHRTASAENVAKEMRAKNPNYTGKEEFNYFIAMIAPDENLMVLDYNRVIKDLNGLSEEEFINKIKENFE
LEEIEGKEKYKPDKKGTFGMYLGDKWYKMKANKNLLEIEDPVDSLDISILQDYVIDAILGIDNPRVDKRI
DFIGGIRGLEELEKRVNEDMKVAFAMYPTSIEDLIRVADANKIMPAKSTWFEPKVRCGLFLHEINE
>gi|260686218|ref|YP_003217351.1| putative signaling protein [Clostridium difficile R20291]
MMNRLKPRILGISILFIIIIILTCGAVFKFKFKLDNKLKETTHTYLSEFTEHNIINLKTRLSGQFDMLES
IANFIGNLNNINNEMVIALMDSDVKRSSLIRMTISTLDGECYSNDGITHNVQDRDYFKKAKNGEKNISEP
LKSIVNNKEIIVLSTPVYKSGKIVGVLSGIYDSKKLNELLGLSAFDEKADVFVAKKNGDIVAQKTNKNRK
TISCIFQLFDKDNCDEDDCLKTIKENMKNDKSGYFNYNLDNEKFMLNYQPLGVNDWYVFSVVPNKIVSIQ
SENISYDVYIFALEILLVILIFIIYIACIINNNTKIIINEKEKFKVLTDNILGGVKTCLKDEYMTMTYVS
QGFLELTGYSCEDLNKIFKNRFKDMIYKDDLDKFNCIILNQLEKQDKIEVEYRIVRKDGSIIWILERSKS
INDNKGSECIQGVLTDITELKKIQEELDSKRFEIQAINDSIVGGIVITEINDDFDSIYLNEGYLNMIGYT
RKQLEDELNNKLIKLIFKDDRTELINSINKQLKLSDTFASEQRVEKRDGTIIWILLKGRKIIYDNGKSVL
CCVIVDITSAKLLEQELKKSEERHEIILKQTQNIIIEWDIEKDKMNISPNWYNKFKYDPITENATKNIIK
SVDIYHDDMDKFISLIKLTSQGSEYEECEIRLRTRDTIYAWFSIKATTLFDNNGKPYKVVGSLTDIDESK
REAEKLKERAEKDPLTDLYNKKASQSLIEEYITLDKKRKGALMIIDIDNFKGINDNLGHLYGDAVLSEIA
NDLINLFRATDIVGRIGGDEFIVFIKDISETRDIINKAEELVKTFERSFLGKGRNYKISLSVGIAKFPQD
GMDYMTLFRNADMALYSAKGKGKNCYTLYDKKIDKVQYITNTRNAGDSDNVEMSFKEHITNYIFDILYES
SDIEVAVNLILSIVGKHFNVSRMYIFENSDDNRVCKNTFEWCNEGVTSEINNLKNICYKDLGNYLLNFNA
DGLFYCNDIENLGSDVKKVLKPQGIRSILQCKILEGNEFRGFIGFDECSYNRMWTNDEVNTLTFISKTLS
MFLLKMRIQSKLEESLTIQKSVMDNMDIWAYVVDRNTYELLFINKKMLESASNTHVGDLCYKAIWNNQDK
PCKKCPMIYLKDGDDTYKSFMRNKKFEVQANITTTTLKWFDGKDACLIFGSEVTSIEAEENT
>gi|260686219|ref|YP_003217352.1| putative radical SAM protein [Clostridium difficile R20291]
MENKFLPISKQDMIDRGWEELDFVLVTGDAYVDHHSFGTAIISRVLENAGYKVGIIAQPDWRTTDDFMKL
GKPRLAFLVNAGNMDSMVNHYSVSKKHREKDMYSPGGKMGYRPDRATIVYCNKIREAYSDVAIVIGGIEA
SLRRFAHYDYWSDKVRKSMLIDSGADLLVYGMSEKQIVEVANALNDGYDPKYIRHIDGTCYISDTLEEIY
DKYILIPSYKEICEDKMKYVEAFKIQYDEQDPFRGNIIVQPHGSKYLVQNKPEKPLSREELDEVYGLPYQ
KTYHPVYEKFGGIPAIEEVKFSIVSSRGCFGSCSFCAITFHQGRAVQSRSEKSIIDEAIGITNLDDFKGY
IHDVGGPTANFRRPACKKQITKGACKNRQCLSPSPCKNLDADHSEYLHLLRAVRKLPKIKKVFVRSGIRY
DYVMADKNNKFLRELIEHHVSGQLKVAPEHISEEVLKYMQKPAGKTYDKFRQKFFAINEELGKKQYLIPY
LMSSHPGSTLNSAIELAEYLRDTHYQPEQVQDFYPTPGTLSTTMFYTGIDPLTMKPVYVPKSKRDKAMQR
ALLQYRAPRNYDLVYSALVEAGREDLIGFGHRCLIKPKNEKPYFNRNNSKKNVSKGTNKNKKTNTNNRSN
KNQQKSSTKKKKKH
>gi|260686220|ref|YP_003217353.1| ABC transporter, substrate-binding lipoprotein [Clostridium difficile R20291]
MKKYISIILLVVVTMVVLVGCSPGKDNPKNKELSVVKQVKVAVPDGLPAVAIAKLANENPEIKEGYETVY
SIEKTPEAISTRVMKKDADIAIVPSNMAAIAYNKTSSYNIVGTVGMGSLYLVSTENIKDYSDLVGKEVGC
TGKGLTPDITIKSLLLQKDINYSNIKFNYVNSASELVPLLATGKVKTGIVPEPALSALMSKNPDIKIIKS
LNDSWKEVSGSKDGYPQSTLIVKSEFLRDNKDFVDSFVGQLSNSIDWANKNPEELGAYSEKIKISTESKI
IGKSLERANLKYIPVKDMIKDYKNYYEKLANFDDKTLGGKVPDEAIYFVEK
>gi|260686221|ref|YP_003217354.1| ABC transporter, permease protein [Clostridium difficile R20291]
MKQYTLLRNKKNKEQFIDKMEVTLSCVILLFLWQIIALKIDNDIFLPTVGQVFNSIKEIMLNSSFYIDIL
YSMGRCFFSFLLAMIFAIILSIVSYLNRFFRNLLKPINALTRSIPTMILVVLALIWFEKDSTPFIVGFTI
VFPILYDNVLGAILNIDKNLLEMANVYKIRFIDKVLKIYLPAIKFQIISILVSTFSLSLKVAIAGEVYSQ
PTYGIGTMIQTEKINFNTSGIFAWIIIVLLISAILQIAQKFLARRAFLWKR
>gi|260686222|ref|YP_003217355.1| ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MEKIKLSIENINKRYDSRIIFRDFNIDFYVNEVNCILGKSGCGKTTLLNIISGIIKNDTNNLNIKENLNR
VGNKLEASYIFQDDRLIDWLTVEENIKIVVNKYYNKTQLNKICDEYLELVGISDYKKFYPQMLSGGIRQR
VNIARAFIYPSKNIIMDEPFKSIDAKNTQLIMDNFRNILRKEKRTVLFVTHNIEEALFLADRIFILGDSP
IRIKKILKNSKELEKNEVLKLI
>gi|260686223|ref|YP_003217356.1| putative regulatory protein [Clostridium difficile R20291]
MVKTNAMRILDSNKIDYKVMSYEVKSEHVDGVEVAHDIGRDVNEVYKTLVTQGVSKNIYVYVIPVHENLD
LKKAAKVAKEKSVEMIHVKDINKLTGYIRGGCSPIGMKKLYKTFVNESAKNLDTIIVSAGKIGYQIELSP
FDLQRLIKVEFVDVIKK
>gi|260686224|ref|YP_003217357.1| fumarate hydratase, subunit A [Clostridium difficile R20291]
MRKIKSEQIVEQVKKLCIEASLYLGEDVLSCIKEKAKSEKSEVGKNILNILVENAEIAKEKNIPICQDTG
MAVFFVEIGQEVLIEGDTLTDAINEGVRQGYEEGYLRKSVVSPINRVNTKDNTPAVIHYDMVKGDKIKIE
FAAKGFGSENMSKMKMLKPSDGLEGIKKFIIDTVSEAGPNPCPPMVIGVGIGGTVDKCAQIAKKALFREL
GEFNKDENIAKLESELLTAINKLGIGPQGLGGTTTALGLNIETFPTHIAGLPVVVNINCHASRHKKVVI
>gi|260686225|ref|YP_003217358.1| putative fumarate hydratase, subunit B [Clostridium difficile R20291]
MIKITTPVNEIDIAKLNCGDTISLSGILYTARDAAHKRLIDCINKGEELPFDVYGQGIYYVGPTPTKPGE
VIGAAGPTTSYRMDDLTIPLLERGLRLMIGKGKRSDEVIEGMQKYGAVYLAAIGGAGAYISNSIKSCEII
AYEDLGAEAIRKIVVEDLKLTVAIDSYGNNIYEQGRAIYECK
>gi|260686226|ref|YP_003217359.1| NAD-dependent malic enzyme [Clostridium difficile R20291]
MSKDYAKLALEMHEINKGKVSVESKVEVKTKDDLSTAYTPGVAEPCLKIHENQDDVYIYTSKGNLVAVVS
DGSAVLGLGNIGAEASIPVMEGKAILFKQFADVDAFPICLKTNDVDEIVKSVELMEPVFGGINLEDISSP
RCFEIEERLKKSLSIPVFHDDQHGTAIIVAAAIINSIKLIENKKIEDLEIVINGAGAAGIAIAKILLNMN
VKNIILCDRSGALEASIENLNYVQKEMLKVTNIRNEKGPLKDIIKGKDVFIGVSGPGAVTKEMVESMSEK
PIILAMANPTPEIMPEEAKLGGAFIMGTGRSDFPNQVNNVLAFPGIFRGALDVKAKEINEEMKIAAAYAI
ANTISDEEICPEYILPDVFNKNVVKNVAKAVKEAAIKTKVNRI
>gi|260686227|ref|YP_003217360.1| hypothetical protein CDR20291_0859 [Clostridium difficile R20291]
MEETKFCQCCAMPMGQTDELYGTNKDGSKSTDYCSYCFKDGEFTADISMEEMIEVCIPHMLQSNKDMTED
EARTMMNNFFPTLKRWK
>gi|260686228|ref|YP_003217361.1| hypothetical protein CDR20291_0860 [Clostridium difficile R20291]
MSSILLVEDDLSLIYGLEFSIQKSGFSIDIARTVKEAMQMYEEKNYDLLLLDVSLPDGNGFQICEKVREV
SNIPIIFLTASDEEVNVVMGLDMGGDDYITKPFKLNELISRIKALLRRYNVASNVNELSSNNITIKLLEN
RVFKGEFEVELTTAEYKLLCLFMKNKNIVLTRKNILDKLWDGNGSFIDDNTLSVYVRRLRNKIEDNPENP
KFLLTVRRMGYKWNVIK
>gi|260686229|ref|YP_003217362.1| sensor protein [Clostridium difficile R20291]
MKIFSNKDIKIFFLILISILVMFIIVGQIVVISITNNYKKTLIEHDYNIAGYLYSIGVDKSKIPSAFVAH
EDKYILKGKEILDTAGYGFDIDVSFTPSVKLFQSKYIKTMSIYLLVFFTMIIFILYMYFFRQQSKIEEAS
YKIDLFMNGNINERLNTYEEGSLSKLFSSIDVMSTSLNTHILKEKQSREFLKNTISDISHQLKTPLTALI
MYNQILQEESHNSDVVEAFVQKSQSELERIETLIKNLLKITKIDSKTIVLNKNNVNLKNLIVKILYSFET
RAEKEGKVISINGSENTLLFCDYEWMSEALSNLIKNALDNTKENDKITIEWFETTITTIVSVKDTGNGIH
VEDIHHIFKRFYRSKFSKDNQGLGLGLPLVKSIVEQHNGTISVESKLSQGSTFTISFLKLTNM
>gi|260686230|ref|YP_003217363.1| predicted abc transporter, atpase component [Clostridium difficile R20291]
MDILVVNNLCKTYGNGYTKVEALKDVSFTVSKGEFVTVVGESGSGKSTLLNLLGGLDTPTSGRIFIDGKE
ICSMKEEKQTIFRRRNIGFIFQAYNLIPELTVEQNIIFPLLLDYKKPDTIYLDEVLTILGLKDRKNHLPN
QLSGGQQQRVAIGRALITKPSIILADEPTGNLDSKNSNDVISLLKVTAEKYNQTIIMITHNTNIASTADR
ILQVSDGVLTDLGVNRE
>gi|260686231|ref|YP_003217364.1| hypothetical protein CDR20291_0863 [Clostridium difficile R20291]
MRSYLELVPQYAKVHKKKNRTTILCIIIAVCLVTAIFGLADMAIQCQKIQFIKDDGNWHIVIRNIDEKFI
SEINSRVDIAHHGRGQVVDSGEFKSKEILIQGLDEEVAKQFNLEIIRGRYPIGENETLIDEDAVKSFNLK
IGDFIKIKLADGRNKNYKIVGEYSSISSLRATDKHGLILSILGTQAIKKSETYDYYYITFKEKVNIRKAT
SDIKNTFNLSDKQIGKNERLLSIIGQGDSDFSKPLYLTAGLLFVLVLVASIIMIYNSFNMSVIERVKFFG
LLRCLGSSKHQVKKFVVLESLILSIKAIPIGLVLGSLVTIISSIFLKYVNELFSSMPILKVSFIGIAFGI
IVGFLTVILSAIIPAKKASRVSPLSAVRGNLMSKEILNNGKTSKVANTGSFKIETSMGLNHAFSRKKSFV
LMTSSFAISIILFLGFSVLIDLMYQGLKPMKPEAPHISIVDPNFKSVLTKEDINEISNIKGVKKVYSRMM
TDIEATYNGKKTKSQLISYEKYQFNWAKKYLLKGEVNENKLQSENLALVEEGHGFDIGDKIYIKNRNAEK
ELEVGGILSSIPFEAKDKYIGNIITSENTFTNITGIKGYIIMDIQVDKDTPGDLIENIRRVVDDNLEVRD
KRQSNLEVKNSFYTMATFVYGFVFIIAIISMFNIINSMNISVTSRKNYYGVMRAVGISNRQLRRMVIVEA
GSYAMSGCLLGSILGLMLHRYMFISLVSSMFHLEWQVPFNLLLITVLTMIIITLLSVRKPVKKICELDII
DSINAQ
>gi|260686232|ref|YP_003217365.1| hypothetical protein CDR20291_0864 [Clostridium difficile R20291]
MINIGDFNKLTVKRKTEFGYFLDGQTNNTKDDILLHNRLIGKNEINIGDEVNAFIFKDSDDRTAATLIPP
LAKVGDVAHLKVVDNTDIGTFIDMGLPKDILVPFKAKTYPLFRDEKYLFYIYLDKSKRIAATTDIDSYLL
TDHTYNVGDIVTGVVYGFQTNNSAMICVDNKYAGVILHNEYFTELKAGDVLENLHVIKIYEDGKLGLSPR
GNRKDELDTLENKILSYLEGSDGYMRFNDKSDPKDISILFNSSKKNFKRALGVLMKKGLIYQDEEGTYLK
>gi|260686233|ref|YP_003217366.1| GntR-family transcriptional regulator [Clostridium difficile R20291]
MKIVNKSSNIPLHTQLSSIIREMIETGELKEGDAIMPERELCNIQNVSRMTVNKTIVGLVTEGLLYRVQG
KGTFVAKQKKKYQFSNVKGFTDVMKEKGVNIKTDILSFEMELPDDLVKRKLGISDNTTNIYKIVRLRYTD
GEPFGLEIVYLSEEMCKGLTKGILDNSSLYRVLNEKYGYKIQKAEQVMEPVILSDEESKLLETDEGALAL
KLHRNSYNREGSPIEYTISIFRTDKYQYEIVLSE
>gi|260686234|ref|YP_003217367.1| N-acetylglucosamine-6-phosphate deacetylase [Clostridium difficile R20291]
MKCLINGKIILKNQILENKVLVFDEKIIDIADSVPKDCEVIDADGKYISPGLIDIHIHGNMGKDTMDSTD
ESIETISKSIMRHGVTSFLPTTMTMDKEHVYDALEVIKKAQNRKLEGAQVLGAHLEGPFINENYKGAQNE
KFIINSKYEFIKEYKDVIKVITYAPEKDIDFDFTREIKRCTDIVLSIGHSNANYDQAKEAINLGVTNITH
MFNAMTGLNHRDPGVVGAALTTNVYSELIADTIHINKDLFQFILNNKGKERLILITDSIEAGGLEDGNYS
LGGQKVIVKGNEARLENGALAGSVLSLNKMVFNFLDNTNLKVNEAINLASLNPATSLGINDKKGSLEIGK
DADIAVFDENLDCKMTLCLGDVVYKNI
>gi|260686235|ref|YP_003217368.1| glucosamine-6-phosphate deaminase [Clostridium difficile R20291]
MRVLVCKDYDGMSKKAAEMIAAQIVLKPNSILGLATGSTPVGMYRDLVKKYNDNIVDFSDVMSFNLDEYY
KLPISNDQSYDYFMKENLFNHVNIKLENTHLPNGMADDIEKECLNYEASIDAAGGIDVQVLGIGRNAHIG
FNEPDTKFAKRTHVVELTESTIEANARFFKSREDVPKKAVSMGIGSILKSKKILLLASGEEKADAVYNTV
YGDITPEVPGSILQLHKDTIVIVDEAAASKLNPKDYKLV
>gi|260686236|ref|YP_003217369.1| hypothetical protein CDR20291_0868 [Clostridium difficile R20291]
MIKSDSNKIKLNKVFLKGEFKMKKALRYLLFLIILLLIYFLAVKLNYDFYTQFHTGYMQDFKRYIFINLI
SSGGIGLLLGTELLIREYKKDGSWYIDIPRLLLLCFPSFLLSLMPVFFFMFPIGNIPIIGNFIMLDRIPL
NIIIFNILFGYFLITSFRKK
>gi|260686237|ref|YP_003217370.1| two-component system response regulator [Clostridium difficile R20291]
MSKLIYIADDEDNIRNLVKTFLKNEGHDVMDFKTGDELLEQFNIKECDLVILDIMMPGSSGFEVCTKLRE
KSTVPIIMLTARDTDIDYITGITLGSDDYFTKPFSPMSLVMRVKSIFRRIEFEKKQNYDKYSNSIDMELK
FGDVIINKKNKIVTSKNVNIDLTPNEYNLLTYLFENIDRAVSRDELLNKIWGYDIEVETRAADDTVKRLR
KKILDTNILIETVWGFGFRLKEKS
>gi|260686238|ref|YP_003217371.1| two-component system sensor histidine kinase [Clostridium difficile R20291]
MNNGNDKNRIGKIKSKFKLKFSKKNISIKTRILLSILCLIIIVFMIILVSFNVFLDTYIKTTANEELTKS
TEIVEHMDSNFRPIKPPQDDGKLPPKVLSNFMRNVQDKVRMAETQSDADAMVVDSKYNLIFPTREDDFLK
NVDEMELIRECIQNEKLDLNSDENTRISTRNKDYYISTVKITSIYGEQDKYLILFIDISKTLNLAQKINI
VLISVMCFAGILAIFTAVILSEKIAKPIKELCEFAKKMGQGDFKRTYFDFSDKELVELSTVMNKSAEYLD
KYDNEQKIFFQNASHELRTPLMSIKGYAEAIKYNVIDSKHASDIILEESDRLSDMVEDLLYISKIDNITK
DFELVECDLREVFSNCGARQNVRAINKGIKFIYEFDEEMVLFECDEKNISKAFMNLIENALRYAKSEIKI
VCKYNQKNIVVIIEDDGIGIKKEDLPHVFERFYKGVGGNHGIGLSIVKSIVNKHGGRIYVENGKKGAKFT
ILFKL
>gi|260686239|ref|YP_003217372.1| putative signaling protein [Clostridium difficile R20291]
MKEQLIFNITNLVTVVFEAFVIHMFLSDFLGQKEGYIKVVRYAKLGFIICLGFCNLITLNPKITMPLIFI
LIFSTSFLYKGNLKTRLFTTVLLSIFFILSEIVVTSIFVLFVKEGFEIMLENNSIRVLATILSKIVFLLT
CKIICLFKKDVHLDMPIKYWLPLFLIPIFSLFLSVSIFDVSKFFSLESLKFLSLISSVGILYINFIVFYL
FKFIIDKTKLSMKYEILEKEIIHKEELRLSNECYKIIVEQTDSVVFEWNIKENKSFVSQAWTEKFGYNNA
CKNIFKEIKDKDLVHSEDKAIFEGFLESIKKKNIHSQAVYRLKKSNGEYIWCRTSITSIYNDENELLRVV
GVIVDVDSDIKKYEELRTRAESDSLTNIYNKGTFEKLVEETIVMNTGDKKDALFIIDLDDFKEINDNFGH
PFGDFVLKTFADKIQASFGNKDLVGRIGGDEFVVYMQDYVTEVNLHKKAKELNRVLSDNYTDLSFSFDSS
VSIGIARYPQDGTSFFELFKNADRALYSIKASGKNSYCLFEEELYVQ
>gi|260686240|ref|YP_003217373.1| MerR-family transcriptional regulator [Clostridium difficile R20291]
MSQVSKNYFTTGEFAKICGINKKTLFHYDDIGLFSPELKKENGYRYYSYHQLSIFGIISSLREVKMPLKE
IKAYIDKRTPNLLIELLEKKTIDIKNEIEKLNNIQALMESTISFTKNACNIDANTITLKEHEEEYLVKTP
ITYKEQFLGDEEENFLYECINFMDNYELSDYGTIGSIIKGEDIINKDFESYSYLFTKVNKEYKKYPVSIK
PKGLYVTAYHKGSYETIYKAYEKLLNFFNQNNLRIGDFVYEEYLLYDISVRDSNEYLTQISAEVKI
>gi|260686241|ref|YP_003217374.1| putative ABC transporter, permease/ATP-binding protein [Clostridium difficile R20291]
MKKLIHFLKPYRVLIVVVLIFTFLQTLGTLYIPTLTANIVNNGVVKGDIDYIVKTGLIMMIVAGITALSA
VLVCKVSANLSSGFCRDIREAVFVKSQDLSINDFNNIGTASMITRSTSDITLIGQSVFMFIQLVLPAPII
TVSGLFLAYSIDKAMTIIIVVVMFLFMLSAFLVGKKLIKLFKMMQIKMDNMNRVLREVVTGVRVIRAFNR
EHFEKKRFDRTAIDYSETAISINKVFAVLMPIVMLIMNLGIVSIIWFGGMRVSNGNMEIGHIMALIEYCI
LILFYLIMGVMVFMYIPRAGACADRVNQILDIEPEIVDGNGRKDTVSERGHLVFKNVTFSYAQSEEPVLN
NITFEAKSGEVTAIIGSTGSGKSTIANIIPRFFEIQSGEISINGQDVKKIPQKELRDKIGFVPQKAFLFS
GTIEENIRYGKEDASIEEIKHAASIAQADEFISDMEDKYDSFVAQGGNNLSGGQKQRISIARALVRKPEV
YVFDDSFSALDFKTDKRLRKALKNEIKDSSAIIIAQRISTIMDANQIIVLNDGKIVGIGKHKDLLENCEV
YKQIADSQLSKEELA
>gi|260686242|ref|YP_003217375.1| putative ABC transporter, permease/ATP-binding protein [Clostridium difficile R20291]
MSEKRIDEQDIEVLSFEDGMSAEKVKDAKKTTKRLLKYMAKQKFKILIIFISVLISSALTVLAPMVMGKA
IDQLFNGIKTAVQTGTKFSVNFSTMGGIVSILLGLYLISAVFIYIQQYIMSGVAQNLVLSMRKDLSDKLN
KLPLKYYDSHKKGETLSIVTNDLEKVADSLQEGLMQLITAVVTVVGSIVMMISISVPLTIVSAITLLVSL
GITVVIARKSQERFSENQKALGELNSNIEEIFTGQIVVKAFSKEKDTIRNFKILNQNLYNASRRAQFSSY
AISPIIRFINLIGYVIIAVVGGIFASTGAMTLGSIQAFIQYVNQASEPTTEISYIVNMLQAAIASAERVF
TVMDEVEEIKDEESSKVISMPKGKVQFEHVKFGYSDDFILMKDININLNAGDKIAIVGPTGAGKTTLVNL
LMRFYEIQGGRITIDGVNIKDLKRGELRTMFGMVLQDTWLFNGSIKENIAYSKSDATMDEIVRAAKSARV
DHFIRTLPQGYDTILTEDASNLSQGQKQLLTIARAILSDPSVLILDEATSSVDTRTEVEIQKAMNNLMKG
RTSFVIAHRLSTIRDADLILVMKEGTIIEQGSHKELIEKKGFYEELYNSQFSSEYDEEVV
>gi|260686243|ref|YP_003217376.1| hypothetical protein CDR20291_0875 [Clostridium difficile R20291]
MNKKLNYRFEMKHKITEADVLALKSRLYPIMKKDENASKDGKYLIRSLYFDTPEDKALLDKLNGVAIREK
FRIRFYNNNCSYIRLEKKIKHYNMTSKLSTNLTKKEVINILNNDIEFLKESTNCLLREFYLKLKCERLEA
KSIVDYNREAFIYPVGNVRVTIDSDIKTSVNSIDLFNKDLPTVSVIDENMTVLEVKYDEFIPDFIKDLIQ
INKTTSTAVSKYASSRLYI
>gi|260686244|ref|YP_003217377.1| hypothetical protein CDR20291_0876 [Clostridium difficile R20291]
MILIMTFNDIFKSSFIENVSGFSFVDSALALGSAFLVGLFIYMVYKKTYMGIMYSRPFNVSLVALTMLTT
FVILAVTSNVVLSLGMVGALSIVRFRTAIKDPMDLVFLFWSLGSGIVLGAGLIPLAVMGSIIMGLILIFF
SNKTISETPYILMVNCNNEDSEDIATDKIKKVFTKYQIKSKSVTPEKGIELVFEVRMKYGETSLINDLSQ
VDGVTNAVLVSYNGDYVA
>gi|260686245|ref|YP_003217378.1| hypothetical protein CDR20291_0877 [Clostridium difficile R20291]
MKDKKFTLLISIMIIFLCAVVGVYSTSSNKSVDLYSDVYIEKYFNRDKVMEVNIEIDESDLKDMNENAIK
EEFKVAKVTVDGDTYGNVGIRTKGNSSLTSVANSDSDRYSYKINFDKYNTSQSMEGLTQLNLNNCYSDPS
YMREFLTYSICEEMGLATPEFAYAKVSINGEYHGLYLAVEGLKESYLENNFGNVTGDLYKSDEGSSLQYK
GDDPESYSNLIVESDKKTADWSKITKLLKSLDTGEDIEKYLDVDSVLKNIAINTALLNLDSYQGSFAHNY
YLYEQDGVFSMLPWDFNMSFGGFSGFGGGSQSIAIDEPTTGNLEDRPLISSLLKNETHKTKYHKYLEEIV
TKYLDSDYLENMTTKLHDMIASYVKEDPTAFYTYEEFEKNITSSIEDSSDNKGFGNKGFDNNNSNNSDSN
NNSNSENKRSGNQSDKKEVNAELTSSVVKTNTDNETENKTTNDSESKNNTDKDKSGNDNNQKLEGPRGKG
GKSIPGVLEVAEDMSKTIKSQLSGETSSTKQNSGDESSSGIKGSEKFDEDMSGMPEPPEGMDGKMPPGMG
NMDKGDMNGKNGNMNMDRNQDNPREAGGFGNRGGGSVSKTTTYFKLILGGASMIIMSIMLVGVSRVKRRR
FIKSK
>gi|260686246|ref|YP_003217379.1| hypothetical protein CDR20291_0878 [Clostridium difficile R20291]
MLQKVLWKFLKLVVGLFICSVGIVLTINCNLGLSPWDVFHQGLSNHIGITIGTASIIVGSIVVIADVVLG
ENVGWGTVFNMLLIGFFMDLLLYSNLIPEADSLFVGIIMLILGLVLLSVGMVFYMGSGLGSGPRDGLMVA
IQKKTGKSLKLIRGTIEVGALIVGFLLGGKVGIGTIISAFGLGYFTQMVFGLFKLDCSKIKHRFIVDDIK
FIKVYMSGEKKAAVQNIVK
>gi|260686247|ref|YP_003217380.1| putative transcriptional regulator [Clostridium difficile R20291]
MDIGEKIKRLRTEKQLTQEELANRCELSKGFISQLENNLTSPSIATLIDILEILGTNLREFFNEIDDERI
SFTKEDMFETEDEDLKYKLKWLIPNSQKNEMEPIIITLYPGGQYKEEKPHEGEEFGYVLAGSIYVHIGEK
KNKVKKGESFYFRPKANHYISNEGKTTAKVIWVSTPPSF
>gi|260686248|ref|YP_003217381.1| spermidine/putrescine ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MVENIIELRDISKHYEELTVLDNFNLDIKKNEFLTLLGPSGCGKTTTLKIIAGFEYADDGKVLFEGKEIN
NLPPYERQVNTVFQKYALFPHMDVYENVAFGLKIKKTPKDVIDAKVKEVLKLVALEGFERRQVESLSGGQ
QQRIAIARALVNEPKVLLLDEPLGALDLKLRQEMQIELKRIQKKLGITFVFVTHDQEEALTMSDTIVVMY
KGKIQQMGTPQDIYNEPKNSFVAKFIGESNIFDGIMIEDYKVNFCNRDFECVDKGFEKNENIEVVIRPED
IKMVKPEEGMLKGKVTSTVFKGVHYEIELNENGRLWILHNTKNAEVGTELGMDIYPEDIHIMRKENN
>gi|260686249|ref|YP_003217382.1| spermidine/putrescine ABC transporter, permease protein [Clostridium difficile R20291]
MKRKSFLAYPYVVWSAIFVIIPLILVVFFSFTKESGGGYAFTLENYKEVIDPIYMKVFGRSILLAGGATL
ICLIVGYPVAYIISKARVSRRGSLILLFILPMWMNFLLRTYAWVAILGKNGLLNTFLGWFGIQPLAILYT
NFAILLGMVYNFLPFMVLPIYTALSKMDNDLINAAHDLGANNMTVFRKIIFPLSLPGVMSGITMVFMPAV
TTFAISRLLGGGKIMLVGDLIEQQFTVVGDWNFGSAISIFMMIVILISMSIMSKFGDESDKEGGGLLF
>gi|260686250|ref|YP_003217383.1| putative spermidine/putrescine ABC transporter, permease protein [Clostridium difficile R20291]
MARWNGFTWKWYGQLLQNESIMSALYYTIVIAILASVISTIVGTISAIGIHKMRGKSKKLILNVNYLPIL
NTEIVTAVALMSLFVFVKMEFGFTTMLLAHIMFCLPYVILSVLPKMKQLPDNIEDAAMDLGATPIYALRK
VILPQIKPGIVSGFLIAFTMSIDDFIISFFNAGNGVSNLSIEIYGMARRGIKPEINALSTIMFAVVLGLL
LLANKKESIVRGIK
>gi|260686251|ref|YP_003217384.1| spermidine/putrescine ABC transporter, substrate-binding lipoprotein [Clostridium difficile R20291]
MIKFKKTISLIAVGMMTVTLFTGCNKATDSTKVLNVYNVGDYIDESLIDKFEKETGIDVQYSTYDTNEMM
YQKVKSGSTHYDLVFPSDYMVEKMKNEGLLEKLDFKNIPNMKYLDKSFLNPVYDKTNEYSVAYMWGTLGI
LYNKKEVKDPMDSWNILWNPKYKGNIMMFDSVRDTIGITLKKLGYSMNSVNPKEINEAKNLLMKQKDLVL
AYVNDEGKDRLLGGEVAMGMLYSGDAVTLMEQNPDLDYAIPKEGTNKWVDAMCVPTTAQNKKEAELFINF
LLDPENAKVNAEYIGYSTPNTGALKLLDPEITQNPVAYPSKEVLDKCETFEDIGENIKLYDKAWIELKSK
>gi|260686252|ref|YP_003217385.1| putative signaling protein [Clostridium difficile R20291]
MNRINKKIDLLILALLVFIFLIVGIVILSIRTENKLNVFIMLAIIFFIIMLTYLSNSVVGLITSSIIIFM
YTSYILYNNITHNMDVEFISYMWIIATPVSSIIMGNLNKSINELQNTNKKLSEQYKELVTIDSETGLRNL
KIFYNDVNMEISKSIRHNTDFSLMIVKLPYYGNLQTIFGENKTNKIVKYIGSNIIECTRNEDIIYSLQKD
MIGILMPNTSLEGSKVVKDRIKKRIKELNLDLNNRGKYVNIDVKIAFLQYKSSFGDSINFKNIVEEELQY
DV
>gi|260686253|ref|YP_003217386.1| putative cell wall anchored protein [Clostridium difficile R20291]
MFKIFNKSLLKLVIVLSIVLTISNFSLFSYASEITSSTDKVLIIYDSKKETAYNRDILNIMRTLLGRFSS
DIELLKLSNYDGEINENYYSHIFILGINENSYNNDKNTKNLISSLNSYKVTICWLGYGIENLLEHKKYNL
DYVGKTNNIVSVNYRGKSYNLDEHYVFNIVESKDTSNKVIGSINDTLNKYPYIINDKNLFYVSKLDLDGV
LFYIFCDSLNDIFNIKTFDKGRIFVRIEDVHAFREPKNLVEIADYLSSKNIPFTIALIPAYVNPKNHKVI
TLSESPEIVKAIKYMQDKGGTVILHGYTHQYKKEEVSGEGYEFWDGKKDEPLKENMKIFVKDRVLNGLRV
CIENGIYPLAFEAPHYAMESEGYKELKKYFSTYMGQHQNNDKKFSTNTYPYIIRDTEEFNIFIPENLGYI
DPEDKFTFQNIKENLDKLSIVRGFSGGFFFHSYLNIEYLKNTIEYLEKQNIEFMNLRDFNNWVKVDEIQI
RNNGDEIIVNYDKDLDEITKSDTRFKYISNISKILIFIVSISVLIFVIIFIYFKRIDKKKFLK
>gi|260686254|ref|YP_003217387.1| putative glycosyl transferase [Clostridium difficile R20291]
MRDLNVSEYLFVFSLFSIWSLLLINIILAMGGYIFYFKNFDKEIKEIDEYPMISILVPAHNEAKVIGRTV
ESLLLLNYPKSKMELIVINDNSSDNSKEILENIKDRYNNYNFTIINTDSLTGGKGKSNALNIGYKVSKGD
FIAVYDADNTPDKNALRYLVQTIVMNDELGAVIGKFRTRNKNKNLLTKFINIETLSFQWMSQAGRWQLFN
LCTIPGTNFILRRSIIEEIEGWDSKAIAEDTEISFRIYKLGYKIKLVPQSITWEQEPETVKVWIKQRTRW
AKGNIYVLMKYIKNIFKQGRNKIVFDIAYFFSVYFLFLTTVIISDILCVLSISKLVEISIPINFFLIWIL
SYLLFIIEVSISLTIEKGEATIENIFIVAIMYFTYSQLWLFVAIKGMIEYLKDIIFKREVKWYKTERF
>gi|260686255|ref|YP_003217388.1| putative cell wall anchored protein [Clostridium difficile R20291]
MKKFIISIISLVLFFSNISLIYKVNADETKVKNYKFERDITIDGVIGSNSTFFEVNKNWDIEEVLLHLNF
SKSQILNGDVSSLTVLINNVPIKSIKLNAKTNYKNTLEVLVPKDYIIQGYNEIKIKTYKTISDKICQDDS
NTGNWMVIHKESYISIRYKQKKVENSINEYPYPYAEIENNHKLDTTIVVPDNMTRGETTAVFNLASSFGK
ITKNDDLKLDVKLYSEMKNWSDDNIIYIGKPENTAEEILDILSIKEQTLLSSNCIIKQVDSPYNKNKKMM
VVIGSNEDDLIKASNLLIENRLSNQVLSSSVLVNKETNIKINREQKLNLGHLTLKDLGYSDFLLEGAFNQ
QALFDVKIPTGKVLDDGSKIILNLRYSDNLDFEKSLVTVSINDVIVGSKKLDRSHSNNDKLELKIPKDID
NKNYYQVKLTFNLSIKNSNCVTRESNNPWAYVSNNSYLALSTKENETLSFENYPYPFVRDDEFNDLTVIM
PDYSGSQAMTWMFRLGVTLGTNINSHNGNINVIRGKEFSDKYKDTNIVVFGVPHNNSVIKMLNNNLNIKF
DKNYSNFISNDKISFIDDYGKNISTIQLIKSPYNNQKNIMVISSMNEKNLYLGMDYLLNKSKVNDLKGDT
LIIDEYGEVEDLAYNLKPKKEVKDSSWNMSINKTTKVFLMISFITIIVVMILSMLYIKKYKRR
>gi|260686256|ref|YP_003217389.1| UDP-N-acetylglucosamine 2-epimerase [Clostridium difficile R20291]
MNDIKVMTVFGTRPEAIKVAPLIKELEKRENIKSIVCVTAQHREMLDQVIETFNINVDYDLDIMEKGQSL
NDITCKILNKLPLILNKENPNIILVHGDTTTTLATSLTAFYNKALVGHIEAGLRTYDKYSPFPEELNRQL
TGIIADMHFAPTNLARKNLISEGKPNNNIFVTGNTAIDALKMTIKENYNHPIIDEIGNDRMILLTSHRRE
NLGKPMKNIFRAIKRIVDDFEDVQIVYPIHLNPKIRTIADEIFGKFPEKIHIIEPLDVADFHNFLNKSYM
IMTDSGGIQEEAPSLGKPVLVLRDKTERTEGIEAKTLKLVGTNEDRIYNSVSDLLINKDSYVQMSKASNP
YGDGNASKYIVDIIIKKFNCKYLN
>gi|260686257|ref|YP_003217390.1| putative mannosyl-glycoprotein endo-beta-N-acetylglucosamidase [Clostridium difficile R20291]
MARKLIKNLGKSKSVKRVKLLFKKIFITVFIVASIVAIFNITKYFEELYKVRDLKSTKIEYYMDVADEAG
DGKVQLSWKALLAIDMVIHDEDLSNIKKKDTLDIGEKFIVEDKNDKGEKVYKVKKFNKVLSELKFDSSQK
SRARKYMKDLEYTYLGNKQLDSSDEKIKFIKKLEDSAIREYIDYGILPSVTIGQAILESGWGNSKLTKQS
NNLFGIKADKAWKGKSVEISTSEHYNEKIVASFRSYNSLQDSVKDHSLFLINNKRYRKHGLFEAKDYISQ
AQALENAGYSTAEDKKGNRIYAELLIDIIRSYNLQLIDNKVETK
>gi|260686258|ref|YP_003217391.1| cell surface protein (putative N-acetylmuramoyl-L-alanine amidase) [Clostridium difficile R20291]
MLNKEINMRRNTKLLTTGILSMAIVAPTMAFATESNAMENNADLNINLEKKSIVLGSKSKVSVKFKEKPD
ADSITLKYKCYDMPLDTTLNYNQSTESYEGTINYNKDPEYLNVWELQGITINSKNNPKTLNKQELEKMGL
NLKDYNVTQECIIEDITSRKDVNKYLRKTSAPITELTGSDRYETAVKISKEGWKNGSDKVVIINGDVSID
GIISTPLATTYNAPILLVEKNNVPNSVKSELKRLNPRDVIIIGDENAISKTTANQIKSTVNASQTRLKGS
NRYETSLLIAKEIDKNHDVEKVYITNANGGEVDALTIAAKAGQDKQPIILTDKNSITDNTYKWLKSEDLQ
NAYFIGGPQMISTNVINKVNDITKDNVTNNRVYGADRHETNANVIKKFYTDDELEAVLVAKSDVLVDALA
AGPLAANLKSPILITPKTYVSAYHKDNLEAKSANKVYKIGGGLTSKVMNSIASSLSKHNTTPTEPGNSGG
KTVMIDPGHGGSDTGTTGKPLGGIKEKDYTLNTSLATTEYLRSKGFNVIMTRDTDKTLSLGNRTALSNSL
RPDLFTSIHYNASDTTGNGVEVFYKLKDKDGGTTKTVATNILNRILEKFNLKNRGAKTRTLSTDPTKDYL
YVLRNNDMPAVLVECAFLDNEKDMSLLNTSNKVKEMGTQIGKGIEDSLK
>gi|260686259|ref|YP_003217392.1| cell surface protein (putative N-acetylmuramoyl-L-alanine amidase) [Clostridium difficile R20291]
MLSKEINMRRNTKLLTTGILSMAIVAPTMAFATESNAMENNADLNINLEKKSIVLGSKSKVSVKFKEKPD
ADSITLKYKCYDMPLDTTLNYNQSTGAYEGTINYNQDPEYLNVWELQGITINSKNNPKTLNGQDLEKMGL
NLKDYNVTQECIIEDITSRKDVNKYLRKTSAPITELTGSDRYETAVKISKEGWKNGSDKVVIINGDVSID
GIISTPLATTYNAPILLVEKNNVPNSVKSELKRLNPKDIIIIGDENAISKTTANQIKSTVNASQTRLNGS
NRYETSLLIAKEIDKNHDVEKVYITNANGGEVDALTIAAKAGQDKQPIILTDKDSITDNTYKWLKSEDLQ
NAYFIGGPQMISTNVINKVNGITKDSVTNNRVYGADRHETNANVIKKFYTEDEIEAVLVAKSDVLVDALA
AGPLAANLKSPILITPKTYVSAYHKDNLEAKSANKVYKIGGGLTSKVMSSIASSLSKHNTTPTEPGNSGG
KTVMIDPGHGGSAPGNSSGGMIEKDYNLNTSLATTEYLRSKGFNVIMTRDTDKTLSLGNRTALSNSLKPD
LFTSIHYNGSTNKQGHGVEVFYKLKDKNGGTTKTVATNILNRILEKFKLTNRGIKTRVLPSDSTKDYLYV
LRSNDMPAVLVECAFLDNENDMSLINSSAKVKEMGTQIGKGIEDSLK
>gi|260686260|ref|YP_003217393.1| hypothetical protein CDR20291_0893 [Clostridium difficile R20291]
MEYLFEKSSLKEYGNEALDKYRELLDKTDNNSRCILLLVPNNNTKIRYERALRLNYSEELKITTYISFVK
KELVKYWPLIIEKCDEINTKVVSPTFISNSLSEYLIVQKVKEKRIQEGYFEDITGTNKSIANSIMTNINK
SAFNLIDFDFIGEKIYSSKKNKDSIYRFSYTQMDEIISYYINSLLSNSILDNALSIYLYNQYLLNDDFYL
KNLFTEVRYIIVDSLESSSNAEVDFITEALDNTLQSYIYFDYSRDYSVFNNVDIDYINEKIISKIKPKEE
NIKKKEIRIEDLYLLPANIELNQSSQLYNEMLDLISEKVISLIEENVSPRDIAIISPINNSILEHQIRDS
LIEKNIDVFSTKKDKKAVDYPYGNALVVATCIFYGYLDFIKDDEYLSFLETLLEINRIKAFKIFNETRHL
SIDNIDEHSQYRDILQYIEEKKKSDIKIHEFLTQFYIDKMLNLKEGKKNVGLCKKIIAESESFSESLSLL
RMKKEKIFIEALKSTINDYYSVVDIEELKSKDKIVITTPYSYISSNIDRSIQIWVDIGSNAWNMKIEKDI
SNLIVLRKSFEEKKIYTNEMEEYYKKYYLYNTVYNLLLNAKKIYAFKSEYAINGYIQESILYSILLKISH
KGDKNYD
>gi|260686261|ref|YP_003217394.1| putative helicase [Clostridium difficile R20291]
MININYREDQIPIINYDNGTMAVPAVPGAGKTFIITNLVAKLLLEQKHKGGKILILTYMNSAVNNFKGRI
RKILEENKIDDTNSYEVMTIHSLAVKIIKEKPEVVMLSEDFNIADDLQKSIILNECISRFRFEGGERAFR
WFLKEQKDERWKEIALEAWERGFFEFAGNAISELKYKGISPDKLEEILSRGHKGMLKIILPIYKLYDRKL
KQNGLLDYDDILILAEKTLSLDEGLRKKFQTRYKYIFEDECQDSNEIQGNIIKIISSENKNLVRVGDINQ
SITGTFSSSDPKFFKEFINSADFCYRMDMSNRSSKDILDLANTLVKYVTKEFRQEECRHALEDMQIKTVP
NGMGYKENPNPEHYNINVKWYESWKIEIEQTARYVKGIKNKYPDKSIGILVPFNEQVTQVAKELRENNLT
FEELGPNSLNKRKVINNIAYIIDFMLHCDDVEKLIVVLNKVFIDTDNEEEIKYFLEELKNYSTEEIIYNF
EFSKLDNDLIEFKEESDIYLSFKRGIDIIKQILEYPIIRLDLLVLFIGKKLNLEKEDKAVLDYISFYIKY
LISENINMDLEDVYNLLFDVKNRVFNHIIDVVYEINGYEPEPGSITLCNYHKSKGMEWDCVFLLGLVEYN
FPDNINQKFQSDKWYLKEKYKNPMAIIKSEVEAILKGSISTDYAHKTKIDSINEKIRLLYVGITRAKEML
VLSGSAYRDESDIGNKRKEQKPCIYLSRLNQHIIEKRSN
>gi|260686262|ref|YP_003217395.1| hypothetical protein CDR20291_0895 [Clostridium difficile R20291]
MNDKLKYFSYSQNSINTYKSCPLKFKYKYIDRINWKNDDVGSREYYETLKTGRDFHLICERYFSNIPLGI
YFNEDDKNSKKFLKWMENIKKVVPIEKGKTYLPEYEVRMTLNGDIIQAKYDLVVIGNNNIEIWDWKTESK
KIDYKHVENRIQTIVYMFLAKEVIPKVLKMDINVKDINMRYYQPEFDDLPITILYDEEKHEANRNKIQNY
ISMIKNTNYEEHTYEDNLYNDIEKVYNKEERMCYRNKKHCKYCEFNKLCNGKEIDYSILEAEIYGT
>gi|260686263|ref|YP_003217396.1| ATP-dependent nuclease subunit B [Clostridium difficile R20291]
MGLRFVLGRSGSGKSTYILDEIKKEAQKNETTSIILLVPEQYTFEAENRVSKLFLGKEKDKYLRVRVLSF
KTLSNIVFSQVGGLTDVNINSSGKAMMVYRAIEDVSEELNVFSKSKSQSGFVSSITDMISEMKQYNISPE
MLENISGELDNETLSLKLKDISKIYNSFEGKLHENYVDAQDMLTSLASKIELSSYLDGACVYIDEFTGFT
PNQYNVIKSILNKSKSVNISLTVDDINYIGYSKSDMFSRTKFTYSKLTQLCNEEGIKILPQVNLNTGVIK
RFEKVKELQHLERFYNAYPYKIYSNPTENIKIKEFNNLYSEVEEIAREIVHLVRDKNVRYRDITIATRDL
NRYDFLVHSIFNEYNIPNFIDKKREAKSNPIVILIISALEMKNRRYGYETMFRYLKSGLIGIDNDDINLL
ENYVLANGIKGKKWFDEKWDYRITQSLSGQESEFELELKEKINEIKNRVLEPIVILQEKLRGKNRVKEIC
RYIYEFLLDINMPETIENLIVNFKDKGELDVANQYSQVWDIVVDILDQMVELMGDEIISLEKFIKLITLG
FDEYELGLVPPSIDQVLVSSVDRMKNPDTKYLYLVGTTDGVFPLITKDSGILSDNDRESLGNKGIEVDID
SKTRSFEEQFLVYKALTSTSKNLTITYPISDHEGKTLRPSIIISRLKKIFPNIENKSYLVEENKSTDKDI
LKKITVKSPTFNELINVIKNYDSDDYNTEEINSIWLDIYRYYLKDEIYSSITKKVIKGLSYTNQVHKIEE
KKIRSLYKSNSLSISRLEKYAECPFAYFIQYGLKAKKRKEYSFTPPDLGTFIHNILDRFSKELLQDNLTW
RDIDEKYIELKIGIIVDEIILKIPGYILNSSERYKYLAYRLKNMLTTAITIISQQIKQGSFEPIDYEVKF
GDNGKYPPIKMVLENGQEVSLIGQIDRVDEFEEGENKYIRIIDYKSGNKSISLTEIYYGLQLQLLVYLDA
ILESAKDEDININPAAILYCRINNPIAKFNEDKDDEEIQEAILKELRMKGLVVKDSHIVKEMDKSLIDGE
RKNSLVIPVGLTKDGNVGKSTSAISYEDFKLLRKYVRHAIKDLCEEMLSGEIRIAPYKHKDGTSCDFCDY
STICQFDSTIKDNKYKNLNNKSNEEIIKMMKGDVN
>gi|260686264|ref|YP_003217397.1| ATP-dependent nuclease subunit A [Clostridium difficile R20291]
MSSPKWTKEQLEVIGSRECNLLVAAAAGSGKTAVLVERIIQMITSRENPIDIDKLLVVTFTNAAASEMRE
RIGDAIGKALDENPENKHLQNQLVLLNKSSITTIHSFCLDVIKSNFHRINLDPNFRIGDQTECAILKQEA
IEEVFEDLYEERDEGFLNLVESYAERGGDKEVQDIILGIYSFAMASPEPKKWLIDSAERFNIDENFDFSQ
SIWARAILDTVKIEINGLCLNMERALKEVESIEELETFAEKLSVEYKKIANISQACNKSWDEAYKKMASM
SFENYVKGVKRISKDAPSYIKESKEKAKTIRDKTKKSLESIVSATFNKDNDSIREEIKYLYNIVKPISSV
VLRFEEEYSNKKREKGIIDFNDIEHFALNILTDIDEKGNIVPSDIAVGYRNKFYEIFIDEYQDSNLVQEV
LLKAVANTETPNRFMVGDVKQSIYRFRQAKPELFLQKYNNYNDKKGSSHRKIMLYKNFRSREEVVDAVNY
IFENIMNENIGEIEYTEKERLNLGANFNVDTDEKSIIGGATEIHLIQKDNKLDDDIINDKDDRINNKENE
IEEEEKLDNIQLEARMVGNIIKDLMKVNEDGKIQKVYDKGIDGYRPVEFRDIVILLRATSAWAPVFADEL
MNMDIPTYADVGVGYFDTIEIKTILSLLQIIDNPMQDIPLISVLKSPIFGFTPEDLIDIRVQSKDKIFYE
VLKSTAEYDGFTDSQNETESEFIPSEECINKSKDFLIKLKEFKEKSMYMSTDEFIWYLYTRTGYYAYVGA
LPGGSQRQANLKVLFERAKQFEETSLKGIFNFVNFIEKLKKSSSDMGSAKTLGENANVVRIMSIHKSKGL
EFPVVICSAMGKNFNTQDFKKSILYHHNLGYGPQFVDYERRISFPSIAKEALKSKINIENLSEEMRVLYV
AFTRAKEKLIITGSTRNIQDSIKRWSNGIESLDTISQYEILKGKNFLDWIMPCVLRHRDLSNLLEEVGLD
AVFNVEHNSKWYGKLWNKNDILVEKKSDEEKESIEEILEKIDVDSPDSDYYSEIEKKLNYIYPYEFSTRK
PATISVTEIKKIQNNYEEELINTIFEQKVILKKPLFIQNEEEREKISGTERGTIVHLVMEVLDLKNVSSV
NDIKSQIRGFVSKGIITEKQASIVNPYKIYKFFASNIGKRMLNAEIINREKSIYAQVNMKDIYIYEKLIN
NDDKKLYDNESVMLRGIVDAYFEEDNQIVLVDYKTDFVNEENINQIIEKYKKQLDLYADIIETLTGKSVK
EKCIYLFGVDEAVCY
>gi|260686265|ref|YP_003217398.1| nuclease subunit D [Clostridium difficile R20291]
MRFIHTSDWHLGKSLEGHSRIEEQAKFCEEFIKIVESNEIDMVIIAGDVYDTSNPPAQAEKLFYQTVSRL
ANNGQRCVLIISGNHDNPERLSAITPLAHEQGILIYGYPLSATIEAKYKGFEITYATQGCTKLNINGENI
VIATLPYPSEKRLNEVFSSEDEFEKQKNYSEKVGDIFRSLEENFRSDTINIAVSHIFVIGGESTESERPI
QLGGSFLVERKDLPEKAQYTALGHLHKQQKASERLNAYYSGSPLQYSKDERAYTKGAYIVDIKAGEKPII
EDVYFNNYKPIEVFKCNGIEEALDICEQNQDREIWSYFEINTDEIISQNEIKKMKELLKDIIEIKPIITS
CYEQESVDIKEKSMAELFREFYSFSKGVEPKGELMDLFLDIISEEGESADETN
>gi|260686266|ref|YP_003217399.1| exonuclease subunit C [Clostridium difficile R20291]
MNQQMRPIRLELTGLNSYIDKQVIDFEKLIERGLFGIFGTTGSGKSTILDAITIAMYGNISRNTKEYINS
VCDKAIISYEFEIGSKNTRRRYIVDRTIARSKTGTKTSNARLIEVLNDNIQNVLADKVVEVNEKVAQVVG
LTANDFTRSVVLPQDKFNEFLRLSRADRRDMLERIFNLEKYGRSLGEKVKKRKNIQLQNLKDLKSKLSQY
DGITEEVYNNINQELIELKNLEKDKNNALDLAQKSYEESKTVYEEQLKLEKNELRKNELDLKNSEIKEKI
ALVENDSNAKKVDPYISSVQNLEKKIDEDSFVVSNLEKKLAILNQELEVTKNRYEKINKIKNEEVPKLSE
EKIRLQQAIKLEEELVLLDRELKDLKESGINLNKTKVELEKVKQVSESRKDAVTKSIKEVEGKIDKVNIS
AELKQKIFLAYEYEKDYNNVLEEKNQKLNKLEEILKETENINLKVRYIDKDKNDVNRNLENLSLHLDVLL
KKCPGKSADLLLKSEYVTELRSKANNTKENEIKKSSIQDELKIILESKFNTEREVNLLNEKLENNRKNRD
DLEKELEELKYLNLASELRRELKENMPCPVCGSKHHENHNITKYDENISFVKEKLEKLEKEKISIRNNIE
ELNAKVSGYLSIEKMKTKELEDVKGKLGGIPSSQLLKKLDEEQRKLALLKSNIQEWEKEKESTENKVTLA
KEEKNKIEKEELKIRESLNNYKKLTRDLNIEIEGLENKCKKLKQEYLGLKTITKVSNLLSKVKEIRENEK
ELELLSTGHSNLLKNRDSLDIKIRENESKLHEIEIELIKARELYVEKKLSRDNKYKEVINITKGDLAKNL
LHNVEENICKILEQEESSKKKLEEQRLEYEKNIAEKHNIDGRLKTAKEQYKDQKSTLNKLLAENKFESIY
AVKRALLDTDAVKKLIEEILEHEEEQKLLSFKIKSSKEKLNGRSIKKEYFEQLKDEIYNLKVEIGNISKD
IGANQNQLITLKDSLDKINDFNKQLKVVEHNVDLLEELDKCVQGNKFVEYVSTNQLKYIALEASKRLDGI
TKGRYALEIDSTLNFVMRDNFNGGERRSIDTLSGGETFLTSLSLALALSSQIQLKGSAPLEFFFLDEGFG
SLDSELLEIVIESLERLHSNNLSVGIISHVEELKNRVPVKLLVSSSEAGIGSKVKIEYS
>gi|260686267|ref|YP_003217400.1| putative modulator of ions transport [Clostridium difficile R20291]
MLESPNNLIQIIFLIVLLIGSAFFSASETALMSLSKIRIRYMQDEGVKGAKLVSSLIENPNKLLSSILVG
NNVVNIAATSISTSLFIGLMGEKGVALATAVMTVLVLIFGEITPKTIAANNSEKVSLLVSKPIKAIIFIL
RPIVWIFNIITNIIFKLFGITNKGAKSFITEEELKTMVNVSHEEGVLEMEEREIINNVFEFGDMQAKNAM
VQRIDMVAIDMEDSYDEIIQVFKTEKLSRMPVYEETIDDIVGILNIKDIIFLSDEEIESFDIKNYMREPF
FTYEFKKITQLLEEMKLEKSQMAIVVDEYGGTSGLLTIEDLVEVIVGDIEDEYDEEEDEIQVIKEDEYIV
DGSTKIGDVNELIGVNLESEEFDSIGGFIIGHLSRLPEENEVIEVDNIRFCIESIEKNRIKKIRIYT
>gi|260686268|ref|YP_003217401.1| peptidase T [Clostridium difficile R20291]
MKQKVVERFLKYVSFDTTSNSQCENCPSSEGQRVLAKYIVEELKTMGVDDVSLDENSYIMATLKGNTDGV
DTIGFISHLDTIEDVSGKDIKPRIIENYDGKDIVLNEALNVITYVKDSPELEEFKGDDLIVTDGTTLLGS
DDKAGIAEIVTAIEYLINHPEIKHGDIKIGFTPDEEIGRGADLFDVEKFGAKYAYTLDGGIVGELECENF
NAANATITIHGRNVHPGSAKNKMVNAIHIAAEISEMFPADERPETTEGYEGFWHLNSIGGNVENVSMAYI
IRDHCREKFENRKSIMIENIEKINKKYDNRVELDLKDSYYNMKEKIEPVMFIVDIAKEAMEELGIKPRLV
PVRGGTDGARLSFNGLPCPNIFTGGLNFHGKNECIPVSSMEKATKLIVRIAEKYAERV
>gi|260686269|ref|YP_003217402.1| cell surface protein [Clostridium difficile R20291]
MLPSCVYADTISKNQNAQVDMNNYLQGRKSPKEEKLIGEDRFDTAIKISQSGWNNGSERVFLVNSNSLPD
ALASTPLASKLDAPILLTNKNSIPYNVTEEIKRLNPAEVILIGSEGAISSSVKESLEDMEVLVSRIGGAD
REETSLLLTRQLDDTGDLGVSKVAVVNGYNGLADATSISSPAASDNTAIIYTGKDSIRSEAKNFITQNST
KTYIVGGEYSISKKLEGQLVNSERLAGTDRKDTNAKVLEKFYGKSSKVNNMYFAKDGSGREADLVDGLAA
GVLASKTKSPVVLASGSLSSAQKSFIKKVKADKFVQVGGGKNSKPYAEALALQ
>gi|260686270|ref|YP_003217403.1| putative phosphoesterase [Clostridium difficile R20291]
MKIGIMSDTHGSLLYFEKALNVLSDCDVLLHGGDVLYHGPRNDIPEGYNPKKFIETLNKLENIVIVKGNC
DADVDQMVIEHPIQSPYVMSQFGEIRIILNHGYIESEEEIIDKAKKMGGDILVLGHTHVKKLYMDDNLIV
INPGSTSIPKDGSHSVAIIDIIKTDDEDELELDINLIDINTGNIININD
>gi|260686271|ref|YP_003217404.1| putative inorganic polyphosphate/ATP-NAD kinase [Clostridium difficile R20291]
MKRIITINTNQLNKSLETKELLTRKLINAGFEVYSDIYPDTELIISIGGDGSFLRTVRDFDFPEIPIMGI
NTGHLGFFPDILPDKIDSFIEAYTKKDYIIQEMSLLNAEVYTTTSGSNMLAVNEVVIRGDKSRTIHLNLS
LDNKHIQNFSGDGMIISTSTGSTAYNYSAGGSIVDINLELMQITPLHPINTNAYRCFTSSIICSNESVIK
IAPEYRFEDSVLIVVDGVEHRFRQIENIKVSISDAKIKLLRMSNYEFWHRVSEKFL
>gi|260686272|ref|YP_003217405.1| ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MGIKKCIRGEDVFSIRNITKKLGKFKLNNINLELKEGDIVGIIGPNGSGKTTLIKIIMGIIDADEGEIEL
CNETIENSPISFKNNIGFVYDSLQFYPHLKVKEFRKIVSLFYKNFDREKFDEYLNKFDIEENMHIENLSK
GQSEKLMLSSALSHNAKLLILDEPTAGIDPIVRTEIMQYLQDFVKNGSSSVIISTHNTDNLIKIADYLVF
INRGNQIFTVKKELIEQEYKIIRANKAELEAIKESIVGVKEYKYYNEALVKVGDSLKVKSLLIEIDKHKV
KNPTIEELMYYYVNEVRGCSI
>gi|260686273|ref|YP_003217406.1| putative ABC transporter, permease protein [Clostridium difficile R20291]
MFNLIRKDLIIGISSDGIRNLKYILLFFVFYFFLNSISYYTVSIVVSYLIFINTFECDYENDSRIFIRSM
PVSIEDIVYSKYLLGVGLIISVTIIVSLLSKLTSLVFFRNMVLNDVFFSVNIFLAILTILLPLIFKFGYG
KMKVCGFIVSILIYFVYGSLLKMISMIVYQVKHFNYSKVGGVYLSNYVTDIANTKYINLYSMTFLTIIIF
IISMYFSIKISKKNKFNY
>gi|260686274|ref|YP_003217407.1| hypothetical protein CDR20291_0908 [Clostridium difficile R20291]
MKKFIKVSFFILGIFTLFIAINKLVYRDMVSVKDYEINHLEEIVFDFDSRRSRDIGTIVRFKISNNSKYS
YKLNSAKMKFENCVENKKGMNKCSAYVNVDLFNEKNSITESTLKYGIKPNNQGYVDFVIPKGLNFDYRYF
NESGMSVEYKGEYIVNIPMAKGLYLVVGKNNDTWNANIME
>gi|260686275|ref|YP_003217408.1| putative regulatory protein [Clostridium difficile R20291]
MSISNVREYFKQFGKEDSILEFEQSSATVELAAEAAGVIPARIAKTLSFKIGDDAILIVTAGDAKIDNKK
YKAEFNCKAKMLTPEEVLEFTGHAIGGVCPFGLKNSIKVYLDDSMKRFDTVFPACGSSNSAIELTCEEME
KFSKSEKWVDVCKNW
>gi|260686276|ref|YP_003217409.1| butyryl-CoA dehydrogenase [Clostridium difficile R20291]
MDLNSKKYQMLKELYVSFAENEVKPLATELDEEERFPYETVEKMAKAGMMGIPYPKEYGGEGGDTVGYIM
AVEELSRVCGTTGVILSAHTSLGSWPIYQYGNEEQKQKFLKPLASGDKLGAFGLTEPNAGTDASGQQTTA
VLDGDEYILNGSKIFITNAIAGDIYVVMAMTDKSKGNKGISAFIVEKGTPGFSFGVKEKKMGIRGSATSE
LIFEDCRIPKENLLGKEGQGFKIAMSTLDGGRIGIAAQALGLAQGALDETVKYVKERVQFGRPLSKFQNT
QFQLADMEVKVQAARHLVYQAAINKDLGKPYGVEAAMAKLFAAETAMEVTTKAVQLHGGYGYTRDYPVER
MMRDAKITEIYEGTSEVQRMVISGKLLK
>gi|260686277|ref|YP_003217410.1| electron transfer flavoprotein beta-subunit [Clostridium difficile R20291]
MEEGFMNIVVCIKQVPDTTEVKLDPNTGTLIRDGVPSIINPDDKAGLEEAIKLKEEMGAHVTVITMGPPQ
ADMALKEALAMGADRGILLTDRAFAGADTWATSSALAGALKNIDFDIIIAGRQAIDGDTAQVGPQIAEHL
NLPSITYAEEIKTEGEYVLVKRQFEDCCHDLKVKMPCLITTLKDMNTPRYMKVGRIYDAFENDVVETWTV
KDIEVDPSNLGLKGSPTSVFKSFTKSVKPAGTIYNEDAKTSAGIIIDKLKEKYII
>gi|260686278|ref|YP_003217411.1| electron transfer flavoprotein alpha-subunit [Clostridium difficile R20291]
MGNVLVVIEQRENVIQTVSLELLGKATEIAKDYDTKVSALLLGSKVEGLIDTLAHYGADEVIVVDDEALA
VYTTEPYTKAAYEAIKAADPIVVLFGATSIGRDLAPRVSARIHTGLTADCTGLAVAEDTKLLLMTRPAFG
GNIMATIVCKDFRPQMSTVRPGVMKKNEPDETKEAVINRFKVEFNDADKLVQVVQVIKEAKKQVKIEDAK
ILVSAGRGMGGKENLDILYELAEIIGGEVSGSRATIDAGWLDKARQVGQTGKTVRPDLYIACGISGAIQH
IAGMEDAEFIVAINKNPEAPIFKYADVGIVGDVHKVLPELISQLSVAKEKGEVLAN
>gi|260686279|ref|YP_003217412.1| 3-hydroxybutyryl-CoA dehydratase [Clostridium difficile R20291]
MSTSDVKVYENVAVEVDGNICTVKMNRPKALNAINSKTLEELYEVFVDINNDETIDVVILTGEGKAFVAG
ADIAYMKDLDAVAAKDFSILGAKAFGEIENSKKVVIAAVNGFALGGGCELAMACDIRIASAKAKFGQPEV
TLGITPGYGGTQRLTRLVGMAKAKELIFTGQVIKADEAEKIGLVNRVVEPDILIEEVEKLAKIIAKNAQL
AVRYSKEAIQLGAQTDINTGIDIESNLFGLCFSTKDQKEGMSAFVEKREANFIKG
>gi|260686280|ref|YP_003217413.1| 3-hydroxybutyryl-CoA dehydrogenase [Clostridium difficile R20291]
MKLAVIGSGTMGSGIVQTFASCGHDVCLKSRTQGAIDKCLALLDKNLTKLVTKGKMDEATKAEILSHVSS
TTNYEDLKDMDLIIEASVEDMNIKKDVFKLLDELCKEDTILATNTSSLSITEIASSTKRPDKVIGMHFFN
PVPMMKLVEVISGQLTSKVTFDTVFELSKSINKVPVDVSESPGFVVNRILIPMINEAVGIYADGVASKEE
IDEAMKLGANHPMGPLALGDLIGLDVVLAIMNVLYTEFGDTKYRPHPLLAKMVRANQLGRKTKIGFYDYN
K
>gi|260686281|ref|YP_003217414.1| acetyl-CoA acetyltransferase [Clostridium difficile R20291]
MGVMNMREVVIASAARTAVGSFGGAFKSVSAVELGVTAAKEAIKRANITPDMIDESLLGGVLTAGLGQNI
ARQIALGAGIPVEKPAMTINIVCGSGLRSVSMASQLIALGDADIMLVGGAENMSMSPYLVPSARYGARMG
DAAFVDSMIKDGLSDIFNNYHMGITAENIAEQWNITREEQDELALASQNKAEKAQAEGKFDEEIVPVVIK
GRKGDTVVDKDEYIKPGTTMEKLAKLRPAFKKDGTVTAGNASGINDGAAMLVVMAKEKAEELGIEPLATI
VSYGTAGVDPKIMGYGPVPATKKALEAANMTIEDIDLVEANEAFAAQSVAVIRDLNIDMNKVNVNGGAIA
IGHPIGCSGARILTTLLYEMKRRDAKTGLATLCIGGGMGTTLIVKR
>gi|260686282|ref|YP_003217415.1| putative pseudouridylate synthase [Clostridium difficile R20291]
MTLKEVLLDKLNFSVRSLSKMKKEKSVLVNGVYKKPSLKVYSGDLIEVKIDEEKANFEPQDLNLQIIYDD
FDIIMVNKPPFMVVHPTKSHYDKTIANGISYYIDNQKENVKIRFVNRLDMNTSGLVIVAKNAYAHHTLST
AMSENKVEKKYITVVDGIIKENEGTIDEPIYRPTEDSIKRIIDERGQSSVTHYKVIERLENATVLEVSLE
TGRTHQIRVHMAHIGHGIIGDELYGYVDEELINRQALHAYKLEFEQPRTKEKLKFKADIPEDMKELISKL
R
>gi|260686283|ref|YP_003217416.1| hypothetical protein CDR20291_0917 [Clostridium difficile R20291]
MIIHKFIIHVLDKNSDVPILNDFEGKVNQEVDGFFQKAIKRIAKDEDLRKGVFKDYNDNLIKNCCEQIIY
DESTFLKNSKEIASYLFDVMKINAALESCDLAICLYTIKDEKSVAILKLDYKKLYTHSIEFVDDKFNIQM
VSNEIGIPETLRQKQGALISLSGINDEFHLRLLDKDAEKEGSESKFVTEFLNAKKIDDDKYKTKVFKNTA
ENWITNALSNDIKQAEDVRSILNYTLKEKHEVDINDFVDNSIKDDELKDSFKEHMEEKGLDESFSIDKKW
VEKKLKKRSIKTDNGFDIKGNLTDFEDPMKYTVKQNQDGTIDIIIKNVTFYEEK
>gi|260686284|ref|YP_003217417.1| acyl carrier protein [Clostridium difficile R20291]
MFEKIKEIIAEQLGVDNLDEITMEASLMDDLEADSLDAVEIIMALEDEFGIEIPDEEAENFKCIGDICKY
IEENK
>gi|260686285|ref|YP_003217418.1| hypothetical protein CDR20291_0919 [Clostridium difficile R20291]
MKYVGLLLTSVGMFLLIAVNFYYNSITLDMQRIEDYVMETNLILEDVAEKESYVSNEKEDYISRLMHVKK
GIENSKTSFLIERYKEYKIKSIESLIYTISEEKKDYLDEVDRYNKLGEKEINKLINKNFLEVTYLSITTY
I
>gi|260686286|ref|YP_003217419.1| hypothetical protein CDR20291_0920 [Clostridium difficile R20291]
MTKLEDNMERFFGGCEGFFGNKMLIIIVIVFLLLCTDILEDLLCDDNIWIWVILIVLLLFNFDDGCCC
>gi|260686287|ref|YP_003217420.1| hypothetical protein CDR20291_0921 [Clostridium difficile R20291]
MLDRFFGEEGCFGGGGWWIIVLFFLFLAFGDSWAEFDIMAWIPFLIVLLILCCCGGCLE
>gi|260686288|ref|YP_003217421.1| hypothetical protein CDR20291_0922 [Clostridium difficile R20291]
MLDRFFGEEGCFGGGGWWIIVLFFLFLAFEDCWRDIDIMSWIPFLILLLITCSCGGFFDGEVGCGC
>gi|260686289|ref|YP_003217422.1| LacI-family transcriptional regulator (catabolite control protein) [Clostridium difficile R20291]
MKMKGNITIKDVAKQAGVSISTVSRVINDSKPVTDEVKQKVLEVIKETGYIPNPLARSLVTKKSQLIGVI
VPEVSDSFVNEVLNGIEEVAKMYDYDILLANTYSDKEQELKSINLLRAKQVEGIVMISWIVEQEHINYIQ
NCGIPATYISKTARNYDIYTVSTSNEEATFDMTEHLIKKGHEKIAFIMTSKDDTVLEMERLAGYEKALSN
NNIELDKSLIKYGGTDYESGYNSMKELLDDGIIPHAAFVTGDEAAIGAINAICDAGYKVPEDISVAGFND
VKIARMYRPKLTTVYQPLYDMGAVAIRMVIKLINKELIENKKIELPYRIVDRESVTERKK
>gi|260686290|ref|YP_003217423.1| hypothetical protein; hypothetical protein [Clostridium difficile R20291]
MNIIQYIFIERGFFMKKLDTESLEKMAKQKNIDKDKIEKMADSYKGKSENELMEELIKIGKNLDGRDEVV
SKFKAFLDENQRKKLDNIMEKISDAENQRDTKPAKTKKAKPTKGKSNSPAPKNTPGGQQKKSKGLFKKTK
KSNPHE
>gi|260686291|ref|YP_003217424.1| hypothetical protein CDR20291_0925 [Clostridium difficile R20291]
MNNLLFLIGVIALSNGNISIFDDKNKSKGNNRVRKNKKNANDKLSQSTHGNLRFDANDIKRGLRLMDLSE
EDLEMGMEIITRTKKYMSRDERKILIKIESVLDLVRGIKKLNNIDMVDTEDETDFFRKMDSDDKKNMMIK
EIIDVFPEKRKNSVEKAIGMKKKIDLFAELFLPDDFGEGGFSLSSLANINNLGSMNNLKLLGSLLRGDDS
NNDDEDNNDELNYEDEELDCEDKELDDDELTDEGEMEDNEDELVEDKNTGYENIENDEDIVYDEELYNIN
EQESEYNYNEKNTKTRAKKKR
>gi|260686292|ref|YP_003217425.1| hypothetical protein CDR20291_0926 [Clostridium difficile R20291]
MQDYKKNKRRMMNQPMSTMNEEEVYTDEINSEDMRGFKKSHHHNGCNTDNKCECHDECNPCNPCNPCKPN
PCNPCKPNPCDDKCECHDKCKCDCEPCEMDSDECFENKCGPECCNPISPRNFSVSNAVPFAIEANRIFDT
MQFQTFTDATGPNGEPLTFETEVVEVFGSIPSAGQASVTIEKICLSNDGIVIDTGMTTLEDFDLDPLGDI
VGRNCETTFEFAVCGERNAECCRQGKGKSVAYKQRGLTVAVRNLVLELRGRCGCTEFVALAFPAVRAGGG
CKRRVDYVEFTFNTLSAPICLPADGRAVTLRQEYQTNLTVDCIGKSILKLECNECCEPFYELIIPNDIDL
VLCLQETVSTLISEQIVVLASPNPIQPRLVDTFSKVCDFSQCGPNHGSGKPSCHR
>gi|260686293|ref|YP_003217426.1| putative polysaccharide biosynthesis/sporulation protein [Clostridium difficile R20291]
MIFLKVPYLVLSTVILFISNFIVRIFGFLYKIFLSRALGETGLGIYHMIFNFLMICLAVTTTGIPTALSC
LVAKRKALNDRHNTNALFISTLYISFFVALIISIVASFNSSFLSLKFLKDAKLNLFILAVCPAIVIITLS
NVLRGYYYGIKNVKIPAIGQIIEQIGKILFVFLLVMYINNKSMNCYIALLGISIGELSNIIFMLICLWRD
SSFDNRYIISIKDFYNSSMETLKMSIPITCNRMSNILLQSISSMMIPSRLALSGMTYQQSLSMYGIVSGM
VMPFIFLPFTVGSALIVNLIPTISQEMALRKRKSVIKKIKYSILLTLFVGILSSIFFYFFGKDLCILVFK
NTLAGEYLKAMFLVPLFMSLNQTLSGILHSIRKELASSINTITGMLIQLIALYVFLPIPGLNIYAYIYTM
TIVSIFTCLLHTIVLFKSLKSIR
>gi|260686294|ref|YP_003217427.1| putative phosphatase [Clostridium difficile R20291]
MFYDYHMHSSFSTDGKSTMEEMVKKSIELGLEEICFTDHVDYDVYADDSFSIVYEDYFKSLETLQSKYKD
KISIKKGIEFGVQTQLMDTYKKEAHQYPLDFIICSIHAIDTMDLYLGNYFKDKTQYEVYENYYLYLYNIV
KNYKDYSVLGHLDLIKRYAPYDTILDDRLFSDIIEETLKQAIYDGKGIEINTSCYRYNLPDLTPSKYILQ
MYKDLGGEIITTGSDSHHISQVACEFDYIYSLLKNMGFKYVSKFNKLKPEFIKL
>gi|260686295|ref|YP_003217428.1| putative aminotransferase [Clostridium difficile R20291]
MINLEKYRIDLNEKKSTKYIQIFNHIKELIINKELVEHEKLPPIRKLSNFLQVNNTTIVKVYELLENEGY
VYKIIGSGTFVSSSNSYKSGIDNRKNKIIVQREDLIHFDNGNPSNDMFPIDSFKNAVNMALSKDGSSIFE
YDEGLGSEELREKMVEYLSDGNIKTTKENIQIISGAQQGIDIVCKGLISYSDVVFMEEPSYNGAIEVFKS
RGAKIISIPMLDDGIDIGILKLKLEKIKPRLIYIMPNFQNPTGISYSTYKKKKLIELAEEHDFYIIEDDF
ISDFVFESKDNRTIRSYDDKNRVVYIKSFSKILMPGLRIGIVEMPNELLKKVLWAKYSSDISTPGLIQKS
MYYYMNNFDWKNYLSHIEKIYTNKYKLSKNLINDKLSGKLKVRKSCGGINFFLELPRGYTSQAFTNFMLN
KGVSMLPGTYFFDNLVDDRFFRINIARPSMEELEKGISVISDNIDEFFCEYKNKLDIKSNKLFY
>gi|260686296|ref|YP_003217429.1| hypothetical protein CDR20291_0930 [Clostridium difficile R20291]
MFDKKKLDRINELAKKNKEGILSADEIKEREILRKEYLENFRAHFRSRLDSVKVVSPEEYEQYMKNNKN
>gi|260686297|ref|YP_003217430.1| putative aminopeptidase [Clostridium difficile R20291]
MNLKYEFKNAWDFERKENTIEQIMQYSRNYMEFLSKSKTERLSVKEIIKLAKENNYISIDEAMEKGSISC
GDKIYVINKEKAVALFVIGKNYIEKGMKIIGSHIDSPRLDLKPNPLYQESNLGFFKTHYYGGIKKYQWTA
LPLALHGIVILNDGTKVDISIGEEDSDPVFCVTDLLIHLAGDQMQKKLSEGISGEALNILIGNIPLEDEE
KEPITANILKILNEKYNIVEEDLLSAEIEVVPAGKARDLGFDRSMVLGYGHDDRVCSYAAVKAILETEQP
EFTSVALCVDKEEIGSKGNTGMHSKFFENTVAELIALEGDYCDIKVRRALANSKVLSADVSAGYDPNFGE
AYEKRNSAYMGNGVVLTKYTGSRGKSGCNDANAEFMSEVKRIFNKGNVVWQTAELGKVDQGGGGTIAHIL
ANQGAEVIDCGVGVLNMHAPHEIVSKVDIYEMYKGYKAFFNINL
>gi|260686298|ref|YP_003217431.1| GntR-family transcriptional regulator [Clostridium difficile R20291]
MLHREVSKMDEKRQKKEMDLEVNSFVPLYQQLYDNIKKQIASGIYKPGDKLPSEGDLCKEFNISRITVRN
ALNELVKEDILCKKRGKGTYVTIPERIEATCAGNSFTNSCHRINAKPSTKIISVLIKKADKQVAEALSIE
LEEKVICIKRLRLIDEVPVIFEVDYFRIDYMFLLKEELEDKSLMEVISNNISTLPKRVENIFEVKHSNKE
YSDYLKCASNMPLLKVRQSVYTENNDVLYYNEQFIRSDKYKYAVSAEI
>gi|260686299|ref|YP_003217432.1| PTS system, IIa component [Clostridium difficile R20291]
MKKIILASHGDFSKGLLNAVKMIVGDLADCVSSYGLYPGQSASDFALELEKTISEDIECEYIILSDLYGA
SVCTAMLRLTNLHNVKLFSGMNLNMVLELLTRFSDELTVEDIEQLVEESRRGIQSVTLQIKEEEEVF
>gi|260686300|ref|YP_003217433.1| hypothetical protein CDR20291_0934 [Clostridium difficile R20291]
MKKKGILSVFKSKKPIIAMIHLKGDTPEDIFERAKKEITIFEENGVDGIMLENYYGNYYDLERILEYVSK
ANLSIPYGVNCLNVDTMGFELATKYNASYIQVDSVVGHVKPRDEATLEEFFKLQRSKCPAYLIGGVRFKY
QPVLSENDVEEDLKIGMTRCDAIAVTENATGQETSMEKIELFRKNLGDFPLVIAAGVTLENAKKQLELGD
MAIIGSYFKDNYKDFGNVSVEHVKTFMDEIKKIREEL
>gi|260686301|ref|YP_003217434.1| PTS system, IIb component [Clostridium difficile R20291]
MIKLVRVDHRLIHGQVAFTWTKFLSTDCILIASDELLKDELRMAGLKMAKPSNVKLVMKSIADSIKALNS
GVTDKYNLLILCESVEDVYRLAKEVKAIKSINLGGTKSDDNRENISKAVHVSKDDIKMIKELDSEGVNVF
VQLVPDDDATNVMKLI
>gi|260686302|ref|YP_003217435.1| PTS system, IIc component [Clostridium difficile R20291]
MKMEFTQVILITLIAFFAYMHSFVGSTMHNRPIVVAPLVGLALGNLHTGIVIGSTLELVFMGAFPVGASN
PPDFVSGSIIATAFVILTGQDVSAAVVLAVPIATLVLLIDNFLMTVVLTWGAHIADRYAEEGNIEGVERV
QLLFGIGNKLILAIIVGIGFSLGVPVIEKILSFIPSYVTHGMDVAAGVIPAIGFAMLARMMLNKKTVAFL
LLGFILVAYLNITVTGVALFGLAIALIYVNFVGEKEVIVDDNEF
>gi|260686303|ref|YP_003217436.1| PTS system, IId component [Clostridium difficile R20291]
MTTSSKKLDTISPDSKITRKDFWKCFRRSLTLDSSWNYERMQNIAYAYMMAPIIRRLYKDDKEKKSKALK
RHLEFMSVTPHISTLLVGISGAMEEENAKNKEFDANSINAVKSSLMGPVSGIGDSFFWGTLKLIAAGVGI
ALASQGNIMGPILFLLIINVPHFIIRYICLDKGFKYGTQFFKDVSSSSIVSKVMEAASMLGLMVIGGMTA
SNVMLKLSVNVGSGEWAEPIQTYLDQIMPCMLPAMIFGIMYWLLGKKVKTTTILISVMIICIVLAAIGIV
>gi|260686304|ref|YP_003217437.1| LysR-family transcriptional regulator [Clostridium difficile R20291]
MDFKQLEVFVAVAKHQSFSKAARELFLTQPTVSAHIQNLERELETVLINRSNKVITLTKSGEILYEHAIY
ILNNCKRAIYDIKEYSGKIEGIIDIACSSIPETYILPDFMKSFSMSYPDVKFSISHYDSQYAISEILNER
ISFGLVGSKINNPQIEYLDLLDDELVLITPSDFKIDNKNNCIDIGELAYLNFIMRKEGSGTRNLILNTLS
KNNFPVSKLNVIAHVESNEAIKEMVRLGLGVSFISYISAIDYLNAGKIKCYKIKGVDFTRKFFFIYSKKK
TFSPLEDKFLNRLCEYFEIII
>gi|260686305|ref|YP_003217438.1| putative lipoprotein [Clostridium difficile R20291]
MKLKRSLVCVTILGIILVGCHKENTKEKNQVASKATQQKTMTKVQNDVNEIMNKDYKYIIKNMGIPYNTF
YYIKPKVLKESNTMQDINTSSYMTLVYPKYTGNDELDGSALYVDINENKVVNVETNSFSSQGISVIDAES
SVVIEKSDHEKSAVSLENFRRIDLGEYVGVEESRINEIVGDANYDLTAYNHEGSKVVKSYRLKEDNKILK
KEVLTISIVDNKIKSIKTIESDKIVKIIKGTLLE
>gi|260686306|ref|YP_003217439.1| molybdopterin biosynthesis protein [Clostridium difficile R20291]
MIELEDAIKIIEKNVLPINRVKIVNLIDAVNKVVAEDIYSTIDSPPFDRSPYDGYAYNANSENRNLKVIG
TLYAGEVFNKVLNKNEAVKIMTGGKIPQGANCVIKKEDVTVIGDMIILNVKLKEYDNYIFKGEDIKKGQL
IINKNQNIGYDGIGVLASLGISKVTVYDDLKVGILNTGTELQDINETLENGKIYDSNRYTLYSRLLKLGI
QADTICNCSDDILELEKKVKNMLQSVDFLITTGGVSVGDKDLIPDVFKKIGATELFWKINIKPGGACYVG
ILGEKLLFGLSGNPHAAIVVFDNVIVPVIEYLTYKKGIHHIKAIFKGEFNKLSNKDRFVSGKLYTSEGKL
YVELNDKKDAKARLSATLRSNCMIKIKKNETIKENQLVEIVIR
>gi|260686307|ref|YP_003217440.1| molybdopterin-guanine dinucleotide biosynthesis protein B [Clostridium difficile R20291]
MKGHNFMYNILSVVSYSGVGKTTLIEGIIKELNKKGYRVGVIKHTCHDFDMDEEGKDTYKHRKSGARKVC
IISDKRVAYIEELKEKNPLYKMIQLYEDMDLIIIEGYKNYRFKRLEVTRKGKYEDILSNKSDLIGIVSDI
EYKLNIEQFNLNDYKNISKYIESCIKNEILSISNVEIKNILKE
>gi|260686308|ref|YP_003217441.1| PTS system, IIb component [Clostridium difficile R20291]
MKKILVACGAGIATSTIVCDRVERLVKENNIHAEVEQCKIAECSTKQEGADLIVSTTILPTTYDIPTIKA
TGYITGINTTALDKKILNALK
>gi|260686309|ref|YP_003217442.1| ABC transporter, ATP-binding/permease protein [Clostridium difficile R20291]
MIKQFVKYYKPYKKIFTLDLIAAFLFSLCDLVYPMITRNIMDDVVPNKNLRMLVVFAVALILIFIAKAGL
NYFMQYWGHVIGVDMQADMRNEVFTHLQRLPNTYFDNNKSGVTMSRIVNDLMDITELAHHGPEDLFISIV
MLVGSFFILIDINIPLTLIIFAILPFIIWFAIAKKDKMNIAFMKSRVTIGDVNATLENSIAGMKVTKSFC
TEKEELNKFVRSNKLFRRARQDSYKVMAEYYSGMNLYMDILEWVVVIAGGYFTYIGKITLGDFAAYILYV
KMFIQPMKKLINFTEQYQNGMTGFKRFIEIMEQDHQKEAKNPIELENVKGDIEIENISFTYEDKTQVLDN
LSLSIKAGKTIALVGPSGGGKTTLCNLLPRFYEFDKGDIKIDGKSIKDVSLKSLRKNIGIVQQDVFLFTG
TIRDNILCGNPNATDEEMIAAAKKARIHDFVETLPDGYDTYIGERGVKLSGGQKQRISISRIFLKNPPII
ILDEATSALDNVTEREIQESLEELSKDRTNLVVAHRLTTIKNADEIIVLTDKGIEERGTHEELVNKNGVY
SRLHNN
>gi|260686310|ref|YP_003217443.1| hypothetical protein CDR20291_0944 [Clostridium difficile R20291]
MEAITAFCLVLISLTIGDIVSAKTKAFVPSVFVSAIIFIVGFWTFFPENIVDLAALGTPLAQLGMLLLIT
HMGTMMSIKELAGQWKTIVIALAGIVGICVGALALGTIVFGWDTAVIATPPLTGGLVASIMMADAATAKG
LASLSVLAILMYVAQGFAGYPITALMLKKEGKRLLSDFRSGKVTVNTDEEKVKDLPEQKSRFKIIPDLPE
KYDTTYMIILRLGFVAWLAVQFTNLTNEVVSRYVICLIFGVIASELGIVDRKPLNKSGSFGWLMTSLMAF
IFAGLAKATPAMLVEMAVPLVGIIIFGVIGMGIFSIIVGKLLGESKEMAFSVSLTSLYGFPPNYILTEEA
VKALAETPEEKEFLMDKMLPKMLVGGFTTVTIASVVIAGIFVNLI
>gi|260686311|ref|YP_003217444.1| putative peptidase [Clostridium difficile R20291]
MCTTWRYGMDIKEITKSYKDYVIKLRREFHENPEKSMEEVRTSKRVKEELDKIEIPYVSAGGTGVIATIK
GANPGKTVALRGDMDALQVVECTDVEYKSKNEGLMHACGHDGHTSMLLGAAKVLNDIKDSINGTVKLFFQ
PGEEVGKGARAMIQDGAMEGVDSVFGIHLWTDVESGTISVEEGPRMASADFFKITVKGRGGHGSLPHQGV
DAVLASSAIVMNLQSMVSREVSPLEPLVVSVGVLNSGTRFNVIASEAVLEGTIRLFNPELRKQIPGILER
IAKSTAEAYRADAELEYGYLTPAVINDKECSKIATDAAIKLFGEDCITLFEKVTGAEDLAEFMNIAPGAL
AFVGARNESKGACYPHHHGCFNIDEDALEIGTALYVQYAVDFLNK
>gi|260686312|ref|YP_003217445.1| zinc transporter [Clostridium difficile R20291]
MIYLNNVIFAFLITLLAGLSTGIGSCIAFFAKKTNTKFLSISLGFSAGVMIYVSMIEIFPKAQDALTKSM
GEKLGSWSTVIAFFIGMAIIAVIDKLIPQEENPHEIKKMENIEEKNIKKNKSLLRTGIFTAMAIAIHNFP
EGLATFISALDDVTIAIPIAIAIAIHNIPEGISVSVPVYYATGDKKKAFYYSFLSGMSEPLGAIIGYVLL
RNFLNDITLGIVFAIVGGIMVFISLDELLPSAREYGEHHLSIYGLIAGMGVMAISLLLFK
>gi|260686313|ref|YP_003217446.1| hypothetical protein CDR20291_0947 [Clostridium difficile R20291]
MSAMEKKIKFKFDWYSSPDKIEKWLEDIEAKGYNLYKINKFGGIFYFHKGSPRKIKYTVDYYYDVENNYF
DEHKSNGWNLVFRSIGSFMGTSAWYIWSKEYKDIPPKLYSDSDKKNKVKSILFMNMFIFFMLVVIFIYLL
NIEIRNLYSGYGASVTAIVLQIILLILYAVQLYRRLMYYLRLKKFK
>gi|260686314|ref|YP_003217447.1| two-component response regulator [Clostridium difficile R20291]
MIKIAVCEDEKETQLLIEDYLENILKDISIEYEIQKYISGEELLESNLKDIDILLLDIKMEKLNGMDTAR
KIREVDDEMEIIFVTSLIDYVQEGYEVRAYRYLLKPIELEELKKHVLTCIKDIEINKESHITIKNKSNTY
KIYLNEIKYIEVQKKDMLIHTINKNFDIKYSLGKIEKELNPYKFIRCHKSFIVNLRYVENIKPNAAILES
GEEVPISRYRYKEVKEKFLKFLGDTIC
>gi|260686315|ref|YP_003217448.1| sensor histidine kinase virs [Clostridium difficile R20291]
MLNFMNELLVVLSIFIQFSIMNGILIYKKDSKKNEKIVFYIVLFLIYIIIQISRLFNGGSYFSNINYLFY
ILAFIAWGGYYNYFYKMDYIKYSIFFYLFSVYYKCLDAVIYRILFFAITGNVISSKESLLVPHLESIKIQ
IYSNLIIILIYLVFSFFRKSIKLISQDKRNYVYLLFALLANTMNMLVNYVLKKLERFGSLHSEGYYFDNF
VNPKLVGASSIFLILLFKEIIKENRLKSQAELIKNKLDMQYAHYLSIQESHMRVKKLYHDINNHIYCIDN
LRNNSKEINEYVNNLKDEIKTFKYIYNTGNMILDIIINEKSEICLKKGIKFTCSINFSKVNFVKPIDVSS
IFSNILDNAIEACDKIVDENINKYIRIKGTITKSFFVLKCENSKLNQLTFNKNILLTNKMDKFVHGIGIQ
SIKSSLQKYNGELLFENSIDKFILNIYIPLEQDTDSWGD
>gi|260686316|ref|YP_003217449.1| putative lipoprotein [Clostridium difficile R20291]
MGGLCMKVKRNINRVAIIVALNLSLALMAGCMSPVSDKNLSSSEQISKDSLKEQVEDKKDESIELFNNYS
QKINDAKGREEVKKDLSQRFSKAIIDSGYSITDSKSDGSFVVSINGAEKPPEKNIRSLFYSMSEDDKEGK
VTIDILCAKEYPEDDKLSESDKYIKFIYNLFKSLTNTNLTEKEIFSMVEEEFNKGVGVVELPYMKDIHVE
VNKVKQSTKVLKLSLVYKFDISNH
>gi|260686317|ref|YP_003217450.1| glycerol dehydratase [Clostridium difficile R20291]
MSQTNRIEAFRQEYINSKPMICCERARIFTESHKKTEGEAICIRRAKAFLETCKELPIKIFENELIVGTA
GKFRRTGILTPEFSWQWVDKEMDTFDKRTQDPYVISKEQIEFIRKEIFPYWKGKSLEEVFLARIPEDTAK
ILVDTGIIDNDSKWRQAVGEVTPDYQDILFVKGYKGIKEDADKKIKELDISVSENIEKIDFYKSVSIVAE
GIMTLAQRYSNLAKEMSKQETDEKRKLELIKISEICMNVPANPPTNFYEAIQFVWFVQLGGILSENPLAL
NLGRFDQYMYPYYENDAREGKITESEAQELIEALWIKLSEWVWTISANTANYFAGYNQFQNLTVGGKKRN
GTDGTNDISYMCLKATESVKTHQPGLSVRVSQGAPDNFVMAVAKLVKQGTGFPAIHSDSAGAQMLLQDGY
DAEDARDWSNCGCVVPHFRKTGQWTSAVNINFAAALEYAMNEGKSRLTGEKMGLDTKNITEFTSFEELKD
EFLKQLAYLVKSSVIGTTVAQQIHKEMVPRPFLSTCVDGCLDKGVDLSKGGAKYNIGPVLTGIGLGVVSN
SLAAIKKLVFEDKVTTLEELTKALNNDWEGYEELRKLALDVPKYGNDNDYVDSLAIEVSDFYYTETRKYK
DIFGSKFNSAFMGISNYVPTGKIVGATPCGRKATKPLTEGVSPFVGTDTTSPLAAMKSASKINHDVHTGG
TLLNLRLNQDLVETERGLRNLTSMIKSYFALGGFHVQFNTISNDTLLKAQENPEEYKDLLVRVAGYSTQF
VNLSREMQDAIIARNSHSNF
>gi|260686318|ref|YP_003217451.1| glycerol dehydratase activator [Clostridium difficile R20291]
MSKKGRVVKVQHFSVNDGDGIRTTIFLEGCKLKCKWCSNPDSWSNIVKLGVMKDKCVSCNRCIDVCPQNI
SSLFDRTQINNKCDLCGECIKVCLKDAICIMTEKMSVEEIVEEVEKDFIFFFESNGGITFSGGEPTLQID
FLRELVDIFYDKGINIAIETCGYFDWNKVNDVFEKIDHIFVDIKSMDDNIHKEYTGVSNKIILDNICRLS
KLNKSMVIRVPIIYGVNDSEENIRNTALFVKQNVPGGKMELLPYHKFGIDKYKALGLEDYIYEFDEICNN
HMLKLKEIVELTGVKIIEYK
>gi|260686319|ref|YP_003217452.1| putative transcriptional regulator [Clostridium difficile R20291]
MDNKFPNVGENLRLLRQEMGISLDKASKMTGVSKAMLGQIERGESSPTVSTLWKISSGFKINFTTLLNEN
TNTYEVIKKEEVEPIVEQKGNMKLYPIYPFSPQRRFELFIIELEENCTHVSSTHSYVLEEYVLVIEGKLD
LNVDGKTYILESGHSIRFDGTLEHIYKNLNKGKTIFHNIEVYR
>gi|260686320|ref|YP_003217453.1| putative phosphoesterase [Clostridium difficile R20291]
MIIKVSMTVLVLILLYILYKYETQHIETTEYTIFNKKIPKEFDNFKIVQVSDLHNKVFDKNNKVLIDKIE
SLNPDVIFITGDLVDGENKNFQVALDLIDNLVEKYEVYHIIGNHEQKSLIKKYKHLYKDYFKELYSKKII
NMENESVRIYRGNSHLNLYGLIIPLECYPYLFANNKKLELSDNFVEDNLGKVNENEYNILLAHTPFFFEK
YAKWGADLVLAGHVHGGIIRIPFVGGVLSPNREFFPKYDWGKYEKDNSTMILNKGLGGSKVLIRLNCKPE
IVKITLKYEK
>gi|260686321|ref|YP_003217454.1| hypothetical protein CDR20291_0955 [Clostridium difficile R20291]
MGDTSRFYESVKNKYPKLKDGTRVHLWPKENIIIGPIYDEEDGYKKSIGNVDSLSWKQIVILAECDGKNT
TDDIINILSNRYRNIHNMKEKVMEFFMFYENVYLTFEDDIQTLSSVFEITGNKSYITPLYFTIEIDGDNN
TNDYFSEITSLLNCMYEKGCRFIEVIGEDILKNKSMREIFQYMLDHFDLIVVTKDSFTIDRSLIKELDNY
RHKVIWKVYSKNDDTRIKLKEDIKITSLIKRGHTVVRGDREKAIKIEDMRFKDTKERFSKYGAEWSHLYI
SSDGSVKSYSFQKDKRVYLGNIFNNSVEEIFLEMQNKIDKLEIVYQ
>gi|260686322|ref|YP_003217455.1| hypothetical protein CDR20291_0956 [Clostridium difficile R20291]
MNVNNHKCPECGEHSKKFEIVEENEDCVIFECYTCGTISILKYCENCKEFVFVNIPNNVETYEYCCGKCN
NKI
>gi|260686323|ref|YP_003217456.1| nitroreductase-family protein [Clostridium difficile R20291]
MDYKTIILNRKSVREYKNIDIKEEYLSEIKKYSESCKKLVPEIDVDVRIMNKSEVFNNLDKVAGYKGNMI
DSPSYIIILSDIKDNYIENSGYIGESIIFKVTELGIGSCWVTFEDGKKVKEKLGINSDKEVTGIIAIGYG
ENVSNAKVLNATKTGQNYSKSDMQVVTDKGSTRLGVEDVVYMNEWGNVASIEILEERALLDAFHYARLAP
STLNRQPWRFIVDGGTVVLAVRKDGHTNLYEEKIDIGIVMLYFATIISATMFDLKWNLGTPDKDYKVPED
YKIVGYCNI
>gi|260686324|ref|YP_003217457.1| AraC-family transcriptional regulator [Clostridium difficile R20291]
MEWINKLNQAITYIEENLESGVDYAEAAKIACCSTFHFQRMFSYIAEVPLSEYIRRRRMTKAAFELQNSN
IKILELSEKYGYDSPTSFNRAFQNIHNISPSAARAKGVVLKAYPKMTLSIYVKGNVEMQYRIVEKKGFRI
VGIKESMNMIVEECFEKVPKLWAKCIKNGTIDKLSELINNEPCGLLGVSVCTNSKGLDYYIAAPTDKPVL
EDTREYLIPSGTWAVFECVSPMPNALAIQELQKRIITEWLPSSGYVYANLPDIELYPNGDINAPDYTTEV
WIPIQKPS
>gi|260686325|ref|YP_003217458.1| transposase-like protein b [Clostridium difficile R20291]
MAVVEKAYKFRMYPNKKQQELINKTFGCCRFVYNKYLAKRIEVYKNDKETFTYKQCSSDLTNLKKELKWL
KEPDKFSLQNALKDLDNAYKKFFKEKAGFPKFKSKKINRFSYKTNFTNGNIMYCGQYIKLPKLDMVKIRD
KQVPKGRILNATISKEPSGRYYVSLCCTDVDIEAFENTNNQIGLDLGIKEFCISSCGEFIENPKYFKKSL
NKLAKLQRELSRKTIGSLNRNKARLKVAGLQEHIANQRNDFLQKLSTKLIKENDIICIEDLQVKNMIKNR
KLSRLISDVSWSEFIHQLKYKANWYGRQIVKVGKFFASSQICNKCGYKNEEVKDLNIREWICPSCNETHD
RDINASINILKEGLRLITIQNK
>gi|260686326|ref|YP_003217459.1| hypothetical protein CDR20291_0960 [Clostridium difficile R20291]
MKKNMLYLGIVYFICGILLVLLATFTEFSFEAFIWGLSGAALGPGICMIFQYMYWSKPERAVDYEEKIKN
QRIEMNDERRVMLRDKAGRITNQIMSYVLVILIFIVSILSVFSVMVISKWVLVVLGLLILFQFICSVVVY
NKLDKKL
>gi|260686327|ref|YP_003217460.1| hypothetical protein CDR20291_0961 [Clostridium difficile R20291]
MFIFYCFGKNKLIKIKVRRCSILNKRHSLPIVSVILLMVLIIFNNNQNYITMKEVFNVHIMQSQNKKIKQ
KYYLTKDGWLLGNFAKLLSDYHIKSYSKAINNLSKLNRKKDFYFVSLPHKTNMLKHLYPSGIEGKNNIDI
NKENLEKQLTDINFLDIDDYFYRSFTEKEREKFFLKTDHHGNSLGAFEEYKFILDKLDLGLSKSEIDSHL
KRYSTRYVNDKVFIGSYNKKMGYPLKKKESISYVEISDANYKYFISNGTKNTEINENIIKAKLKDKREWD
YGGAYMRGCDCHILKIRNSSSLTNKKALIFRDSYQAPMTWMLADTFKELEILDPRYIKNIDMTYDEIIKN
SNANVVLFMYNSFGFAGMIQEMIDKGIA
>gi|260686328|ref|YP_003217461.1| hypothetical protein CDR20291_0962 [Clostridium difficile R20291]
MSKKKPRIVAISFLIIVFGFFILNFTLPKKKLSITENRNLAKFPTVENLKKCDFIAKFEEYFNDHFAFRD
EMISINTRTQANLNKTKVGNYYLGKDNWILGMFPEILDQKQLSRYEKSINYLSNLSKDMGKNVYFTMMPH
KTNMLKHLYPKYVDNMDNIDINLKNFKNRLNPDLIKYIDMDEYFLSNYSDKERENLYFKTDHHWTGYGAF
EGFKMMASNMDLGLSKQDLDKHFSSYKKSIITDKKFIGSYNQNIDMLIKENEYVVYMTKDNQDYSFDING
EEKEEKEEKEVYATERDNKEWDYGGAYIRGAKTNILTIKNPKALVDKKILIFRDSYQAPTTLLFADMFKE
VEIADPRNINSIYKTYKEIIEESNADIVMFMYNSSGFDSMIDSMIDKGIK
>gi|260686329|ref|YP_003217462.1| hypothetical protein CDR20291_0963 [Clostridium difficile R20291]
MIFSSLIFLFLFFPVTLICYYLANPKYKNVMLLLASIAFYAWGEPKYIFLMILSIIVNYIFGIKVSGSKN
KKMWVVLSVIYNISILAVFKYSNFFIDNINFLFNTDITIPEVKLPLGISFFTFQIMSYVIDVYRNDAKVQ
RKLANLALYISLFPQLVAGPIVRYQTVADSIEYREHNWDKFTQGVNRFVVGLGKKVILANQLGVIADGVF
NKSAGDLSRLEVWLGIVCYTLQIFYDFSGYSDMAIGLGKMFGFEFLENFNYPYISQTVSEFWRRWHISLG
TWFKDYVYFPLGGSRVSKAKLYRNLFVVWFLTGMWHGASWTFIIWGLYYGILISVEKAFLEKFLYKMPRI
VRHIYLLLIVMIGWVFFRVDDLPAAIKFIGIMFGAGNYPVISDAFNVFIIEYWYIIVGAILLSTPIVKVV
KSLLIKKNKNTLNSTLYQVTNVVFIVSCMFIVIIMLSSSTYNPFLYFRF
>gi|260686330|ref|YP_003217463.1| DNA polymerase I [Clostridium difficile R20291]
MEKKLIIIDGNSIINRAFYALPEMNNKEGLKTNAIYGFTTMLFKMIDIYKPTHISVAFDRKAPTFRHLEY
KEYKAGRKGMPDELAEQLQPLKDLLDKFKINRLEIDGYEADDIIGTVSKKAENNGYKVYIVTGDKDAIQL
ASDNTTTLITKKGVGEVEEYNFNSVIEKYEMTPAQFIDLKGLMGDKSDNIPGVPGIGEKTGIKLIKEFSS
IENLIENTDKLKGSVKKKIEENKEIAIQSKRLATIIRDVPIEVDLDSMVFGDYDKDELLDKFRYFGFTSL
LSRLVDLVDSDDTEHVEEKIEILKLKDTEKFIDEVNKKGQVILKTVRGQGNILEKNIIYIFISVDGEKIY
YVDSNEVSKLDSIFSNNEIKKYGYNLKDDYISLKPYNINLENMYFDITIAEYLIDSTSSTSYDCSAIAMK
YLSKKVKSKEELLGKGVKSKNYEDLEFEDLAEYMGQIICTVKETIPMMERSLMDMSMDGLFYHVEMPLVE
VLGHMEYEGIKVDKSILDELSVEFKEIIATLEKEIYELSGEPFNINSPKQLGVILFEKLELPIIKKTKTG
YSTNADVLEKLRDKHPIIDKITEYRQIVKLNSTYVEGLLNIINPESNRIHSSFNQTITTTGRISSTEPNL
QNIPIKMEMGRKIRKVFIADDNCKLVDADYSQVELRVLAHMSQDENMIEAFKHHEDIHTKTASQVFNVPM
EDVTSELRGAAKAVNFGIIYGKSDFGLADDLNIPVPKAKEYIESYFAKYHKIKEFMDTTVEKASEDGYAV
TILNRRRYIPEIKSSNFMERNRGKRFAMNAPIQGSAADIIKIAMINVHKKLEENNLKSKLILQVHDELIV
EAIDDEIDIVKKIVKEEMENAVNMDVHLDVDLNVGSSWYETK
>gi|260686331|ref|YP_003217464.1| putative dephospho-CoA kinase [Clostridium difficile R20291]
MLILGLTGGIGCGKSSLSNIFRNLNISIVDADIISRKIFEDKLLLEKVFVHFGQSIKNDDGTLNRKALGK
IVFSDEEKLKELNSLTHPRIREKIISEIEELRKKGENIVVLDAAILVESGFLDMVDKLLVVTCKQEVQIS
RIQKRDNCSKQEALSRINSQMSQEEKSKYGDYIIDNSGTITELESKAHKFIEYMKENWRE
>gi|260686332|ref|YP_003217465.1| putative transglycosylase [Clostridium difficile R20291]
MNSKKVLILSIFIILFGALLMESKVIHKFLYPKKYSEYVEKYSKEFNLDENIVYSVIKAESKFNSSAVSK
KEAKGLMQILDITRDWGAEELNLKNVDIFDPETNIRLGCWYLSKLYKEFGKLDLVIAAYNGGSGNVKKWL
ENNEYSKDGENLHDIPFKQTSKYVEKVKNNYEHYNKIYGKKGKN
>gi|260686333|ref|YP_003217466.1| putative solute-binding lipoprotein [Clostridium difficile R20291]
MKRIKVLTVVLAITLMVAGCSNTKTKQSSSDSSLQSQSSIDAKYINLTMVTPKTINPITNTDKSVGYIMN
LVYDSLFTIDENYNVIPQLVKEYNIAQDGMSIDIKLKDAKWHDGKNVTSNDVNYTIGLIQKSADSPYNEF
TKNIASVNIKSDKDFTIKFKARYAFSIDSLIFPIVSQNHLDSKDVNDKNNNMIGNGKYKIESYTEREGMV
LSVNKDYYEEVPKTMKNIKVGMVPNEEARTSMVMALDSDITNVTLNDLSKFQEKEFNITKYQGRDYECVL
FNYNNPFFKDVNFRKAIAHSIDKDRIISEGYMDDATPVNFPLNSKSKYYNSEMKDLEFNKDKAIECLAKV
EYANINSVNQNDNKVKNQKKSAKKNSKKLTPEEEAKAKKAEEDRIKKEAEKKKNREKEEVKKSLSEMNLK
IIVNRDNSERIKTANIINENLKAIGINSTVNQLSDKDMENALNSKNYDLALVGWKLSIIPDASSIIASSG
YTDDKLNGYMSALTSSTSEIETKKAYKDVQTYIKDNATFISLAVRNNYIVSNSRLKGKITPNDFDVYEGI
SNLDIKSNESN
>gi|260686334|ref|YP_003217467.1| putative heavy-metal binding protein [Clostridium difficile R20291]
MKKKLLVEGMSCGHCVNHLKTALTEDIDGIEVLDVDLENKCASVDMKDDISIEKLKEVIAELGFELKGIE
>gi|260686335|ref|YP_003217468.1| hypothetical protein CDR20291_0969 [Clostridium difficile R20291]
MESRGYKEDLKKMILDMAHKELESYVSQKGAKKYFEGNLDKIINNNIKKFNQSIGLNRVYLKMLKKCAYQ
ESVTSISRTIKKEALFKSKKELFAFSEYLKLDINKRLSYNQILRKISRYIYYNRSSYAQKYVVFKRGDEE
YLLEPEKIKDELISSYRSKTREDMRSIAKLLDIEVEDDYNAEDIRKKVINYIIKEKLKS
>gi|260686336|ref|YP_003217469.1| lactoylglutathione lyase [Clostridium difficile R20291]
MKFNFCHNNFNVTNLEKSLDFYKKALGLKEVKRKEAEDGSFILVYLGDGITSHTLELTWLRDWDRPYNLG
DNEFHLALEVEEFDEAKKLHKDLDCICFENESMGIYFIADPDNYWIEILPKNH
>gi|260686337|ref|YP_003217470.1| putative cell wall hydrolase [Clostridium difficile R20291]
MIVVKKAIAALGIGAVAVSVSSINASALEKGTVTASALNIRSGPSSDCDKVAKLYKGKTVEILEKSNGWY
KVRVSSSVVGWGSAKYISTSGSSEGTSNQNNPTSSGTTISGNGKVNVSSRLNVRSGAGTNYSLVGKANNG
DVVKLLEQSNGWYKIKLSNGVTGWASSQYISKTSEDVGTNNSSNSNSTNNSDKKPSSEESIEGKNGKVTS
AVSLNVRSGPGTSYSIIGKLNGGDVVELKSKNNGWYKVKLSSGTIGWVSASYISETNEGTKEKPNSSSNQ
NSQSNSNSKPSFTGNSDKSTAKGSTIVDFAYTLIGIPYQWGASGPDKFDCSGFTQYVFKHSVGVSIPRVS
REQANFGSAISMGNYAPGDLVYFDTDGDGTTNHVGIYVGNSKFIHCSGTQTNPNKVKVDNLTSSYWSKVL
LGARRFV
>gi|260686338|ref|YP_003217471.1| hypothetical protein CDR20291_0972 [Clostridium difficile R20291]
MNRRKTIYRGFNNNRHKIDLRKYVITIACLCLIGYYSYTKIKDSKILEYVSAKIPFLNNSSDITYKDISD
ELNSIKKGKKSKSQTNSDDKQETNPEKAVNNTKEPEEVKLATIEGWDMYTIQVAAIDNNDDLKKIQTSLV
NNDIPFSVMEKDGVKKIQTYSSFDENDVRKQISSVRKVFPDAFLSHLDAPMLSLEYTSNYAYIESISKEL
NKLITNFKEESSFWSNAENNVDMEKYNTILTNRKAISQNISKEAEKIDYSEMRLFKDNLIEYVKNVNEKI
DTASKAANEEKYSVSKSLLLSSMQEYSMFINSIK
>gi|260686339|ref|YP_003217472.1| electron transport complex protein [Clostridium difficile R20291]
MKLLTFKGGIHPPYRKEYSNTKALEKAQAPKIVYIPLQQHIGAPAKPIVEVGDEVKFGQKIGEQQGFVSC
NVHSSVSGKVIAIEQHEVPGGSAQCVVIENDFKEELHESVQPKGQLEDLSKEDIVGIIKEAGIVGMGGAT
FPNHVKVSPPPDSKAEVVILNGAECEPYLTADHRLMVENPEDVVFGLRALMKVLDVKKGFIGIETNKPDA
IEAIQNVAKDYSEIEVVGLQVKYPQGAEKQLIYACTGKEVPSGGLPIAAGAVVDNVATAAQIAKSIKTGM
PLVERITTITGSCIKEPKNLITKVGTLVSEIIEQCGGFKEDKKIGKVIMGGPMMGIAQYTTEIATNKGSS
GILCLDEEESRTPDIQNCLRCGRCTDVCPSFLQPLFISAYSLKDDYDTAEYHRAMDCIECGSCSFICPAR
RPLLQSIRSAKREIGAKRRKQAAQK
>gi|260686340|ref|YP_003217473.1| electron transport complex protein [Clostridium difficile R20291]
MENKLIVSSSPHVRSNEDTSYIMKQVIIALLPAAVAGVYFFRLNALSAMFFCILGTVGTEFLYQKFTKQK
STIGDFSAVVTGLLLAFNVPASLPWWMCLVGGIFAILVVKMVFGGIGCNFVNPALAARAFLLASFPVAMT
AWTQPGVNWIGKNLDAVTTATPLSFLKNGAAGLADLSSNGISLADMMIGNIGGCIGETSAILLLLGGVYL
MYKGIINYVIPVFYIATVFILTFLLGGFNITFAIYQLFAGGLMLGGFFMLTDYTTSPMTKKGQIIYAVLA
GLITTVIRMYGGYPEGVSYSILLVNCLAPLIDKFVRNRVFGEVAK
>gi|260686341|ref|YP_003217474.1| electron transport complex protein [Clostridium difficile R20291]
MNSMVRLGGTLLAISAIAALALGATNQVTAPVIEQRNIQENNELRKAVLPEAKEFKEMDKSTYKDLGDGL
IAEVYEGLDGSEVVGYTLKAKPSGYGGEIEVMVGISSEGQVTGVDIGNMSETAGLGAKAKDDAFKGQYKG
KTAEPLEVAKGSTTADNQILAISGATITSTAVTTGVNAAIDVFNSALNK
>gi|260686342|ref|YP_003217475.1| electron transport complex protein [Clostridium difficile R20291]
MNLAKVFKNGLIDENPTFVQVIGMCPTLAVTTSAINGIGMGLSTAAVLICANLVISLIRKITPDKIRIPI
FIVVIATFVTIVGMLLKAYVPALDKALGIYIPLIVVNCLILARAESFAFKTGAMPSIVDGVGQGLGFTVA
LTIIGAVRELLGNGSLFGMTLFGASFQPVLIFILPPGAFLTLGFLFAGFNKLRSKKA
>gi|260686343|ref|YP_003217476.1| electron transport complex protein [Clostridium difficile R20291]
MNLILLFLSIVLVNNVITSQFLGICPFLGVSKKVDTAVGMGVAVTFVLTLASIITYFIQILLVKTGTGFL
QTIAFILVIASIVQFVEMVIQKMSPSLYQALGVYLPLITTNCAVLGIALVNVQKSYNLVETIINGFGAGA
GFTLAIVIFAGIRERLELADIPEAFKGFPITLISAGLMSIAFLGFTGLIKL
>gi|260686344|ref|YP_003217477.1| electron transport complex protein [Clostridium difficile R20291]
MVILTAVLVLGIMGLIFGIVLDFASKKFAVEVDERVEAILGVLPGANCGGCGFPGCGGLANAIVEGNAPV
NGCPVGGADVGAKVGEIMGISAEAGEKQVAKVICKGTCSSAKDKYEYEGISDCRAANVLNSGAKMCKFGC
LGLGTCKDACKFDAISIVDGIAVIDEEKCVNCGKCKEVCPKGIIITKPESQEVVVECNSKEFGKAVKEKC
TAGCIGCGMCVKACKFDAIIFEDKIAKIDPNKCVGCMQCVAKCPTKVISGDITKKKKVTIDQELCVGCTV
CKKQCKFDAIEGELKEKHKVDADKCVGCHLCMEKCPKKAIKIL
>gi|260686345|ref|YP_003217478.1| hypothetical protein CDR20291_0979 [Clostridium difficile R20291]
MYVICTYLVYHYIVKNSTEMSNLFCYTIVIFITIRINIHKIEVWKLFHTSVLCTH
>gi|260686346|ref|YP_003217479.1| septum formation protein [Clostridium difficile R20291]
MNIILASASPRRKEILENTNVRFDIIKNEIDEIILEGETPKHLVMRLAFEKSMSVASEHNEDVVIGADTV
VVLDNAILGKPKDESCARDMLKRLSGREHQVITGISLINLCEDKKVIDYVISNVKFKTLSEQDIEDYLKT
NESFDKAGAYGIQGYGALLVEEIRGDYFNIVGLPISRLGDLLKKYFSINLFYGV
>gi|260686347|ref|YP_003217480.1| DNA repair protein [Clostridium difficile R20291]
MAPEERPREKMLAKGVKSLSNAELLAILLRTGNKNKNAIELANYIINRDIQGIRHLEDMTIEELCNIDGI
GLSKSTQIKAALELGSRVASFKPIKYKIRNPWDIQRYYMDSLRYLKKEVFKAVLLNTKNEIISDVDVSIG
TLSSSLVHPREVFKEAIRRSASKIIVMHNHPSGSVEPSREDKNITSRLIKCGEIIGIEIIDHIIIGDGLY
FSFKENMII
>gi|260686348|ref|YP_003217481.1| rod shape-determining protein [Clostridium difficile R20291]
MAKEKKKEKKGFFSFNKMTKDMGIDLGTANTLVYIKGQGIVVREPSVVAIRDDSKEVLAVGEEAKKMIGR
TPGNIVAIRPMKDGVIADFDITQSMISYFIQKAADKKGVVSPRIAICVPFGVTEVEKRAIEEAARQAGAK
DAFLIEEPMAAAIGAGLKVEEPEGNMVVDIGGGTSEIAVISLGGIVTAKSIRIGGDEFDESIVAYVKKEY
NLMIGERTAENVKINIGSTFKDDEEINMQIRGRDLISGLPKTIEICSTEVREALKEPVSSIVDAIKSTLE
RTPPELASDIMENGIMLTGGGALLRGLDKLITQETGMSVQIAETPLDCVALGTGKSVEDQEIFEKVLMMN
TKN
>gi|260686349|ref|YP_003217482.1| putative rod shape-determining protein precursor [Clostridium difficile R20291]
MALRFDKNKNEKKRINVKVIATGVVAITLIGIVGISIGKFSSGSPVNLGVASDAITSVGKGINDGFSFIK
NGFKDVANFKDNSKKVKKLEEENEKLKKDMIALNAKLDKTESLEELKKTLNFVQEEYKATSISASVVGKN
DGNWYESFVIGAGKNSGVKKESIVMNGSGLVGIVYEVSNNYSKAISLLDSKASVSFKLAKDANAKGTITQ
NTTLDNKDSYNSKGYLQGYMFDSSYNVIQGDIITTSGLGFFPDGIPIGEVEKVVDDKDKSLKYVVVKPYV
DFKNINDVVVIEPRNIG
>gi|260686350|ref|YP_003217483.1| hypothetical protein CDR20291_0984 [Clostridium difficile R20291]
MKKVLLCLLGIVLMTIENSITNYIDIFGISFNLVLIYVTIISLYLDELEGGIIAAIIGLIKDITVGGIFG
VNALILFIIAYAIGYMRDQLYKGSYIITFVLIFIGSLIDSIVNIGTSSIIYQSYNISTLFVKGLLVAPIV
NSLIGLVIYRLSKRAVLKLKED
>gi|260686351|ref|YP_003217484.1| putative penicillin-binding protein [Clostridium difficile R20291]
MEENKQVDRLKIIKIVMSVIFLAILVKIIYMTTFKYEYYNELAENKTYKKLAIEAPRGEIKDRYGRLLAG
NKNLFTVQVSGNDINKKDANKHSRANEISLKLINLLERNGEEYVDEFPIYVENGKYYYTYDRDIREYKSE
NGIPNDYNAKESFYYLVDKLISAGILSQEDKRLDATRLQAKLNENGYYPPILVSKWMFTAERDKRDWLAS
YKIKETKLSAKEAFEKVRNSDALEIDKSLSDEDARKIMVVRDLIKSKGYSQYNPVTIAKDVGETTIAQIE
ESAMDLVGVSIAVEPVRYYPNGSLASHMLGYVGKMPSTQIESYLQKGYETGDMVGLAGVEKSNESRLRGT
DGYKMVKVDALGRISKEIESKKPKSGDTVYLTLDKDLQEVSDNALKQIIEVASKGGTFKSKFGDKPISAY
AGKAQSAALIAIDVKNGEVLASSSYPNYDPNKFAKGISTEDYKALQPKNPNDLLAGSPLLNLVTQGEFQP
GSSFKMLTSMAALENGLDPNFTINDPGVIMLGKKSFGDYVWNHGRGNHGMTNLYKAIQESCNIYMATIGT
GKTWPDGKSIGIDMNANKILEYAKLFGLDQNTGLQDEVEERAGKVPSTEDKLKSTQALLKSNLEREMAND
FVDITREKNPKEYEKRINEIVSWAAEKKTPGRVETMNRLKKMNVKEDRIEEVADLAVFSYFNFAKWSTAD
TFNLAIGQGENAYTPAQISRYVAAIANGGNLVELSVVDRAVSSDYSSVKINDQKKVEKIPFKNPDNLKEL
TKGMKLVARQGTAKSAFADFPIDVAAKTGTAEKSGKIPTDNEYEYLKSHMSSYNVNLNDAIKLADKMKAE
KEKELSLAKEKEIKKKLENKDLKDEERKKLEEELEDGVKVRLEDTDKVNSSYLRKAIKELNPKITDDQID
RFKQDYGSFTWTVAFAPADDPEIAVVCVIPQGDSSVFSLLPTREVIGTYMGLEPTNSKNDNKTNDVNNSS
DENINFESQINR
>gi|260686352|ref|YP_003217485.1| septum site-determining protein [Clostridium difficile R20291]
MSLREICSQELVEFKGNKRGIIVNIKREAPFEEIQEKIINKLEAYVGFFNGAKISKINSDCLTDMEILEL
KEGITSRFDVEFVEDQKIEENSNFPTKYVNTLRSGENIEFEGDVVILNDMKPGSKVLSKSNTVVMGDINA
GAKVVAGGNVFVMGKIEGFVHAGAEGNEFAYVVAGNLNPKILQIADNIAEAPDDEENYENESEISPEIAF
VSNGRIVIESYLSKLDK
>gi|260686353|ref|YP_003217486.1| septum site-determining protein (cell division inhibitor) [Clostridium difficile R20291]
MSEVIVITSGKGGVGKTTTAANLGTALSLENKKTVVVDADIGLRNLDVVMGLENRIVYDIVDVVEGTCRL
KQALIKDKRFDNLYLLPAAQTRDKNAVSVEQMIDLCEKLKESFEYIIIDCPAGIEQGFKNAVAGADRAIV
VTNPEISAVRDADRIIGLLEANEIKEIRLVINRIRNDMVKRGDMMDKQDIIEILAIDLLGLVPDDESIII
STNKGEPAILDSKSLAGQAYKNIAKRILNEEVPLLDLEVEDGFFGRLKKMFSMAK
>gi|260686354|ref|YP_003217487.1| cell division topological specificity factor [Clostridium difficile R20291]
MLDLFRVFSNEAKTSKSVAKERLKLVLVHDRVDCSPQLLEMIKTDILKVIANYAEIEDDGLEIKMSKCRG
EHDDKPVSALVANIPLKNIKDRCM
>gi|260686355|ref|YP_003217488.1| rod shape-determining protein [Clostridium difficile R20291]
MKKININYKSTIKLIKQLDWKLIVTVLAIFIFGLVILSSATHANSTGSYNQLIKQGLAFVLGIGMIIVIL
FFDYNLLGRYYKALYIISLILLAIVLLPGIGTVKGGARSWINLGPLDLQTSEIVKLTFVLSYAKILESKK
DKLNTLKEVMPVVVYSLPFIGLLIAQPDLGTGIVFCCMIFAMLFTAGLSSKLIKRGIIILLVSMPLMYLM
MADHQKVRIEAFLNPEDVTLKGNYQVMQSLIAIGSGGVTGKGLYNGSQNQEDFLPVQDSDFIFAVVGEEL
GVIGMAVLIILFMIFLLRLLAIARDAKDFYGTLIVVGVMGMFGYQIIQNIGMTVALIPVTGVTLPFVSYG
GSSLLTSLANLGLVLNVCMRRKKINF
>gi|260686356|ref|YP_003217489.1| methylglyoxal synthase [Clostridium difficile R20291]
MNIALVAHDQMKNTMVGFCIGYESILKKYGLYATGTTGKRIMDETELNINRLASGPLGGDQQIGSLIVTQ
EIDLVIFLRDPLTSQAHETDIQALIRLCDVYHVPIATNLASAEIFIKALDRGELSWREVRKSKSQRI
>gi|260686357|ref|YP_003217490.1| PadR-family transcriptional regulator [Clostridium difficile R20291]
MQLNKEVLKGYIDILIVSILEKKDCYGYEIAKQVRERSEFELKEGTMYLALKRMESKNLIKSYYSNEQSS
GGRRKYYNLTNEGKDFLEIKKQEWRFIKKVMNQFLGEVD
>gi|260686358|ref|YP_003217491.1| hypothetical protein CDR20291_0992 [Clostridium difficile R20291]
MKLIDEYLDKLYKKCDNKSTIELKQEMRCHLIESANEFKLEGLDEEEACKKAIERFDDGDEMQYELCNII
KELSLSLDRHKSIVMGFKKVLGYISIIAFLISGFMWYYNNSLQHNMYNLGKELDGEIKQLAERHDMTNIG
EYKLELEKILDKDKYSKVKALRLYVIDMKDGNTNLSSSGLNANMVYEREADYNNISNFIQHLGYNGKDFL
DKNGNIVNPDIFLEYFFYFESEMLIPVAFAFGLLCIIAYFILRFKISLIKNNN
>gi|260686359|ref|YP_003217492.1| hypothetical protein CDR20291_0993 [Clostridium difficile R20291]
MNLINGRELKVKYIIKENANMKKIRKLATKLLIATMVLTSCMSVTVYGMTAKDVTAKTPKSYVAGTNSIY
GPKLSQAQLNSVAQATADFMNKKITKNMTTDAKIRVAYNHIKNNTTYVNWNAAEGANTAYTLVTKKGACS
GMCRSLKALCDAMGIECYYVHSTTNDHQWNLIRFEDGRLYHVDIDANKSAGADIIYKSLTHPLPFDKKAY
PAVGESVKTQNPTPTVKKPTPAKPSAPVGPGNHTMIADQEEAILDEVYGNNLRPKIERYEGVPCSLINSS
INTIKFTSKNSNLDPSRHTVSVIGFMNTPYGMVALAPDGVPVEYPFEYDKPFSLDFTGKNLSAAELSKKC
KNNNVIIKIEIGEIEPNSGRGQVRYARYVN
>gi|260686360|ref|YP_003217493.1| putative anaerobic nitric oxide reductase flavorubredoxin [Clostridium difficile R20291]
MSKVFEVKKDIYFTGVVDEGLKVFDIIMETEFGTTYNSYLIKDEKTVLFDTVKANFKDEFLSNLSEVTDI
AKIDYVVIHHTEPDHAGSLKYLLDINPNIEVYCTKAAKLYLDGQINRPFNCHVIKDGEILNIGKRNLRFI
TAPFLHWVDTMFTYIEEDKTLLTCDAFGCHFASVDAEVVNSEDYLKSAKHYYDCIVKPFAKHVLSAVDKV
VGLNIEFDTILTSHGPMLTKDPMAAVKRYVEWSTEAVNTTNQNQVSIFYLSAYSNTLEMAKKIKEGLDKE
GAKAELYDLEDMTLTEMHDTLVVSKVILLGSPTINKTMVKPMWDLFSVIDPMANQGKIAGVFGSFGWSGE
GITMAETLLKSMSFKMPVESLKKKFFPSEETLKECMAFGAEFAKLVK
>gi|260686361|ref|YP_003217494.1| radical SAM-superfamily protein [Clostridium difficile R20291]
MNKVDLKKILKKVEKPARYLGNEINSIHKDTSNSELIRYAHCFPDLYEVGMSHLGSHILYDVINKDEDVF
CERVYSPAVDMENIMREKSIPLFALESREPITNFDFVTFTLQYELSYTNILNILDLANIPILKEERTLED
PFIMVGGPCAYNSEPLADFIDVVILGEGEEVNLEVVNEYKEWKKNKTTREDFLYKISSIEGVYIPSFYDV
KYNEDGTVQSVTPNREGITKNPTKRIIKDVETVDYPEKLIVPYIDTVHDRIVLELFRGCTRGCRFCQAGM
IYRPIREKSVKRLKEILDKLVKNTGYDEISLSSLSTSDYSKLSELTDYLVDEYASNNIGISLPSLRLDNF
SMEIADKIQQVRKSGLTFAPEAGTQRLRDVINKGVTEEDLENATERAFEMGWNSVKLYFMIGLPTETYED
LDGIAKLAYKVIDIYRKVNGGKLKRSFSVTVSTSTFVPKPFTPFQWHGQDTTEEVINKQRHLVNKLRNNN
IKYNYHDSKTSLMEAVVARGDRRIGKVIYDAFRLGAKFDGWAEHFNLDIWKEAMEKNNLSIDFYAHRNRN
YEEVFPWDHIDVGISKKFLIREDENAKKEKITSDCRHNCNGCGINIHDIGRGLC
>gi|260686362|ref|YP_003217495.1| hypothetical protein CDR20291_0996 [Clostridium difficile R20291]
MSKIIRVKFKKEGDMIYISHLDLQRLLQRAFRRAEINLSHSQGFNPHPKMSYGNALALGTESQGEYVDIE
IEEDDLSVEEFLNKVSIQLPDGIDFIKAKEIDRQTPSLSSVIDYGEYLFNIDLKRPMTKEFVKRKVIDFM
NNKEIIITKKNKKGKMVEVDIRPMIRTFDVLNLEDEHITLTATIATGSKTNLNTNILIPKILEMFELDID
PLDVDILRRDLYVLEDGELVTPM
>gi|260686363|ref|YP_003217496.1| ribonuclease g [Clostridium difficile R20291]
MKKIVIESLIGSQKTAVLEDERLTELFVEDNLNKKTVSNIYRGIVKKVIPGIEACFVDIGFKKLAYLQLK
KGSTIKSGQDILVQINKEEIGTKGAKLNTEISISGRYIVYIPSNDRTTISNKITDEKERFRLKKITKAVN
KENLGLIIRTEAQGCTHDEIKKDIEELKLKYENILKEYKLGIGPKLLYKSLDFATKYVKDNVNDDIESII
TNSYDKYSELKSILRGIDKTYVDKLCLEENRDVFDLYRIESKIEKLLNKKVWLKSGGYLIIEKTEALTVI
DVNTGKFIGTGKLDETVYKTNLEAAKEIVRQLIIRDIAGIIIIDFIDMHKKKHQKEILHILEEEFNKDKR
KAEVLGMTKLGLVEVARRREKESIDKYYLMSCPCCDGEQTIKSVHYILDSIEKEIMRISEHTVYKNIMVE
FNDFIFEQIKEYYMDIIDKIGEKYNIKISLNANSTLKHNKTNVIFDKIVDNKM
>gi|260686364|ref|YP_003217497.1| 50S ribosomal protein L21 [Clostridium difficile R20291]
MYAIVKTGGKQYKVSEGDVLFVEKLEANAGDVVTLNEVLACSKDGELKLGSPVVEGASVQAKVVEQGKAK
KVIVFKYKAKKDYRRKQGHRQSYTKIVVEKINA
>gi|260686365|ref|YP_003217498.1| hypothetical protein CDR20291_0999 [Clostridium difficile R20291]
MIKVKYYYNDDFLLQGFCLKGHADFAEIGYDIVCAAVTSNAIAVINSLDKLQKIEFEKVVGEEGHIECIV
KDTHVKDAQLLLNHFQLAVKEIKREYPKNIKILKK
>gi|260686366|ref|YP_003217499.1| 50S ribosomal protein L27 [Clostridium difficile R20291]
MLNMNLQLLASKKGVGSSKNGRDSISKRLGVKRFDGQLVTAGSIIVRQRGTKIHPGTNVGKGSDDTLFAL
VDGTVKFERKDKKRKKVSIYPVAIAE
>gi|260686367|ref|YP_003217500.1| Spo0B-associated GTP-binding protein [Clostridium difficile R20291]
MKNLFIDKARIFVKAGNGGNGSVAFRREKYVPAGGPDGGDGGRGASIIFEVDLGLRTLMDFKYQKKYQAQ
NGGDGSKGKRAGKNGENLVLKVPAGTVIRDEATGLVLADLKKEGDTAIVAKGGIGGKGNQHFANAVRQAP
AFAKSGTDGEERWITLELKMIADVGLLGFPNVGKSTFLSVVTKAKPKIANYHFTTLTPNLGVVQTKFGDS
FVLADIPGIIEGASEGIGLGHEFLRHVERTKVLIHIVDISGLEGRDPIEDFDKINDELKLYNEKLSKRPQ
VVVANKFDILEDESKFEKFKSELEGRGYTVFKMSAATRQGIDEVIAYVSKMLKEVEDVELVSEEEMYRPE
LDIGTEEELSIDIEDGVYVVTGKALRRIMYSVNFDDMESLQYFQKAMESQGVFDRLREMGIEDGDVVKIY
ELEFEFYN
>gi|260686368|ref|YP_003217501.1| hypothetical protein CDR20291_1002 [Clostridium difficile R20291]
MLKGKQRAYLRSLANTLKPTTQIGKEGVTESFLEQLDGMLRTRELVKVTILENAGLDTKETANAVCEALR
AEFVQAIGFKFTIYKRNIEEPKILFPGHEQAKAKTKNNNVTKKGKPTKRAVR
>gi|260686369|ref|YP_003217502.1| homoserine dehydrogenase [Clostridium difficile R20291]
MKIAILGYGTVGSGLIDLIENNTSKRDIEVVGILVKNKEKHKYKKYFDKITTDIEDIFDKDIDILVEVIG
GLNPAFDYVTRALNKKIHVVTANKDLLAEKGSDLIELANLNNVSIKFEASVAGGIPVLKPLIESLEGNNI
KSINAILNGTCNFILSKMYDENLPYDVALKQAQELGFAEVNPDADVLGYDSARKLSILSTLSYGKIVYWK
DLLLEGITSIDEKDIEYAKKLNCKIKLVARSKYESGEVSGFVRPALVDNNNMLSKIDNEFNVVILVGDSV
GELSFVGKGAGRGATGSAVYADIIDIIDNRSSNIKSFSKGKLDLSGLIEDECSAVVRFGGYNNKDGILEC
LDKYVDSYDIIDDEELAIFVSAKSEHEIDRVLEIVKRNNYSESAKKLLKID
>gi|260686370|ref|YP_003217503.1| putative integrase/recombinase [Clostridium difficile R20291]
MATRPIEIDEYKKIMELLHTGFTYSENGVEKRFRKNPKVALALMLEANLGLRISDILRLKIGNFKGNMLE
INEKKTGKLQYRPVNKNIIESINEHARKYNLKSNDYLVNIKTKAIQKQLRIICKHLNLYNISTHSFRKLY
ATTQFEKSNNNLELVKELLNHSSVATTQRYIRVTQQAINEASENFFIG
>gi|260686371|ref|YP_003217504.1| hypothetical protein CDR20291_1005 [Clostridium difficile R20291]
MKKNKIIAFFAPAIIVGVLVLGIILYPNEAIKSAREGFSIWSNVLVPSLLPFIIGANLIVDLKIVDIIGF
IINPITRFVFNVSGKSALAFAISTVSGYPVGVSLASEFRSNGQISKHEAQRLVSFCSTSGPLFIIGSVGT
GMFQNSNLGYLMILCHYLGTILVGLFFRNYGNENLPKTKLDLKTNIKNVINIRNSSGNGFFVLFGNAVFN
GVNTLLTVGGFVIVFSVVFKILSLFNVISLIASVIYLPLSFLGVSKELCQAFVSGLFEITIGCNKVSSIT
SSPEILRASLASFLIGFSGLSILAQCCTFLSKTDIDLKLYILSKFAHGVLAAIFIFILYPIANSAVLVSS
FADTYNVIYNNLIWFYYLSYYDTILQIVVIIYLISAVFIAKKHMKTLSTNGKLMRYKNTFFIKKFSRKK
>gi|260686372|ref|YP_003217505.1| GntR-family transcriptional regulator [Clostridium difficile R20291]
MFNSIASKKVYEQVIEQIQYKILNGELKKGDKLLSERELSEQMNVSRTSIREAIRVLETMGVIESRQGEG
NFICTNIEKTLIEPLSMIFKLNNGTLEDILELRIILEIEIAKLASKRITSSEVIELKHIIDEMRVETNKK
DNNRVLVLLDQKFHSKLATLSKNYLIQSLFMTASKLFDGFIEDAREKIIAEPFNENILLKQHEAIYNAVV
ENDVELACEKAKEHMDFISKNYRKNEN
>gi|260686373|ref|YP_003217506.1| hypothetical protein CDR20291_1007 [Clostridium difficile R20291]
MVKLKVPYSKQGMILEIPDERFLGVLESKSDNYIEHKTQEEIVEESMNNPIGSNSLEELVKGKKNVVIIT
SDHTRPVPSRITMPIILRRIRNVNPEIDVKIIVATGFHRPSTREELIYKMGEEIVDNEDIVMHISTDDKS
MCKVGILPSGGDLYINKLAYEAELLIAEGFIEPHFFAGFSGGRKSVLPGIASAKTIMYNHCSDFIDSDNS
RTGKLNNNPIHEDMVYAAKVAKLAFILNVVIDKDKKIIASFAGDVEKAHTKGCRFVTELSKVNSIKSDIV
VTTNGGYPLDQNIYQSVKGMTAAEATCKDGGVIIMISACNDGHGGQSFYENVANADSPKQLLDKIRSVDR
VDTIPDQWEFQILARILSKYTVIMVTDKCNPEMIKKMHMKHAFNFKEALEMANSIVGKESKVVVIPDGVS
VIVK
>gi|260686374|ref|YP_003217507.1| electron transfer flavoprotein beta-subunit [Clostridium difficile R20291]
MEILTCIKQVPGTTSVEVDETTGVLKRDGVDSKMNPYDLYALETALRIKEDKKANLKVLSMGPPQAKKVI
EESFMMGADEGALISDRRFGGADVLATSYTISQGIKKMGKVDLIICGKQTTDGDTAQVGPEVAEFLDIPH
VTNVTKLIEVKDESIVVEIDMPNDLQVCEIEYPCLITVEKDIFQPRLPSFKLKLNTKDREIPVYSLDDFE
DKDENNYGLNGSPTQVVRIFPPKPNTDKNIVRGNADELSFALVNKLEELKLV
>gi|260686375|ref|YP_003217508.1| electron transfer flavoprotein alpha-subunit [Clostridium difficile R20291]
MSKIVVNQDKITDLKRILEICPFGAIEEKSGIVEISAGCKMCKLCVKSGPKGAFEFIESSKVQINKDEWR
GIAVYVEHHNGNIHPVTYELIGKAREMASKIKQPVYCVFVGKDIKDKCSNLISYGVDEVFVYDEDEFKDF
RIEPYSKAIENFIDKIKPTIVLVGGTTLGRSLAPRLAARFRTGLTADCTILDIQSNTDLDQIRPAFGGNI
MAHINTPNNRPQFATVRYKIFSAPEKIENTTGKITLCKVEKKELKSKIKVLSVKEKNKEVGLEEAEVIVV
ASRAIKKQEDMEMIYKLADKLNAQVAGTRPVIEAGWIDAKKQIGLSGRTVKPKLIITCGVSGAVQFVAGM
QGADYIVAINKDDKAPILDVAHLALIGDIYDIIPKLIEKIENNKDNNQKYMASAAK
>gi|260686376|ref|YP_003217509.1| putative FAD/FMN-containing dehydrogenase [Clostridium difficile R20291]
MYKLIDKKDIDFLIDTCGEENVLVGSDINEDFSHDELGGIEKYPEVLVNVLETEQVSKIMKYAYKNNIPV
TPRGQGTGLVGAAVAINGGIMINLCKMNKILEVDYENLTLTVEPGVLLMTIGQYVQDRDLFYPPDPGEKS
ATIAGNINTNAGGMRAVKYGVTRDYVRGLEVVLPNGEIINVGGKVVKNSSGYSIKDLLVGSEGTLGIVTK
AILKLLPLPKKSISLLIPFPDLSMAIETVPKIIKSKSIPTAIEFMERDVILAAEEFLGKKFPDNTSDAYL
LLTFDGNSTEDIEKEYEKVANLCLENGALDVFISDTQERNDSIWSARGAFLEAIKASTTQMDECDVVVPR
DKIAEFIRYTHELQDKLKIRIKSFGHAGDGNLHIYILKDGMDDNTWKIRLKETFDYMYKKSRELSGQVSG
EHGIGYAKKEYLHESNSDAYMMLIKNIKLAFDPKNILNPGKIY
>gi|260686377|ref|YP_003217510.1| hypothetical protein CDR20291_1011 [Clostridium difficile R20291]
MNILGLIVEYNPFHNGHIYHLSKSIEKTNATHTVAIMSGNFLQRGEPALFDKYTRAKIAVENGVDLVIEL
PTLFACQSAEIFSHGAITILNSLNCINSICFGSEEGNTEILYNIAEILANEPNEFKLLLKKYLDDGLLFP
TARANALFDYIHQDKKNNFIQNYSKEQLSKTLNSSNNILGIEYIKNLIHLNSSIKPFTISRVQSEYNSEE
IESDICSATAIRTSLKENTDLFHLKNVIPEKTYNILNEKVDNGFLPMFDDFFFDILKTIILRDMDTLKEY
FEVNEGIENRIYKDIFTSEFLHELQLAIKSKRYTLTKIKRTLNNILLGIKKSDMQLIKNIDTIPYIRILA
FNDKGREILKEIKNKSEIKIINKFSNISFSLDDTIFKTLISYDIKATNIYNSIYYKNNKDLVKGPMDFYT
HPIYVK
>gi|260686378|ref|YP_003217511.1| acetate kinase [Clostridium difficile R20291]
MKILVLNCGSSSLKYQLIDMNNEEVLCIGLVERIGIEGSILKHEKAGRDDKYVVEQPMKDHKDAIALVLE
AVAHPEFGAVKEMKEIDAVGHRVVHAGEKFATSVVITPEVEEALKECIDLAPLHNPANIMGIDACKAILP
DVPMVGVFDTAFHQTMPKSSYLYGLPHELYTKYGVRRYGFHGTSHNYVSQRAAEILGKDIKDLKIVTCHL
GNGASIAAVDGGKCVDTSMGFTPLEGLIMGTRCGDIDPAILPFLMRKEGLDADGLDKLMNKESGVYGMTG
ISSDFRDIEDAAKNGDERAQATLEAYVKKVQKYIGAYAAEMNGLDVVVFTAGVGENGKAIRADIASNMEF
LGMKLDKEANDVRGKETVISTADSKVKMLLIPTNEELMIARDTLRLVK
>gi|260686379|ref|YP_003217512.1| hypothetical protein CDR20291_1013 [Clostridium difficile R20291]
MKVSIEKINRKETDKIDLNFCEKIDTISYCDEIYKLVSPVNLKGKVSKTNKGLYLDIDVNFTIVDTCSRC
LKEVEIPLEYSIQGFLVKEEDYDEDEFEEFDPFIFDGEEIDLIDIIEQTLDFNVPHKVLCSENCKGLCQV
CGANLNEEECSCSEITNDEEYIDPRFAKLKDLFN
>gi|260686380|ref|YP_003217513.1| 50S ribosomal protein L32 [Clostridium difficile R20291]
MAVPKRKTSKSNTKMRRAANSKMEATGFVSCPQCHEPKLPHRVCPDCGYYKGKEVVSK
>gi|260686381|ref|YP_003217514.1| DeoR-family transcriptional regulator (fatty acid and phospholipid biosynthesis regulator) [Clostridium difficile R20291]
MKKKSKAQRQKELIDMLKTDPFYTDEELSSLFDVSIQTIRLDRMSLNIPELRERVKSIAETQSSKVKTLG
VKEITGEIIDLSVGRLGISMLEVTQDMIYSKTNTLKDTYIFSLADSLAMAIIDAPKVIMRVANVKSFKLI
EQQDRLIAKAEVYRNIDKKHYVKVVINNKAQEQIFRGKFIFEELD
>gi|260686382|ref|YP_003217515.1| fatty acid/phospholipid synthesis protein [Clostridium difficile R20291]
MKIVIDGMGGDNAPKSNVEGAVNAIKEYQVDLIITGDKDLLEKEFSNYEFDRNKLEIVHTTEIIENEDKP
VKAIRSKKDSSMVVALNLVKEGKADAIISAGNTGALLAGGLFVVGRIKGIDRPCLCSAIPNVKRGMTLIA
DCGANADCKPKNLVEFAAMSNIYSRKVLGLENPKVALANVGLEEGKGNDLVKRSYEEIKKLDLNFIGNVE
AREVINAYTDIIICDGFTGNILLKSAEGVALSVMSLIKETFMASTKSKIGALLIKDDLRKLKSFIDYSEY
GGAPLLGLNGGVIKAHGSSDAKAIKNAINQGIKFSKGKVVEDINQFISKYNEENKNNEDE
>gi|260686383|ref|YP_003217516.1| 3-oxoacyl-[acyl-carrier-protein] synthase III [Clostridium difficile R20291]
MNTKAGILGVGSYLPEQSYDNFHFEKIMDTSDEWISTRTGIKERRFAKESEATSDLASKAALKAIECAKL
NVEDIELIILATITPDMSLPSTACIVQDAIGAVNATAFDISAACSGFVYGVTIAKQFVETGCYKNVLVIG
AETCSKFLNYDDRTTAVLFGDGAGAAVIGPVNEGGILSTHMGSDGKGKDCLKVPAGGSRLKASKETVEAN
LHTIEMAGSDVFKFAVRKMAETSLRALEKANLNTTDIDYLVPHQANIRIIQASSKRLELDMKKVYVNIDK
YGNMSAASIPVALDEAYREGKIKKGDNVVLVGFGGGLTWGASVVKWTL
>gi|260686384|ref|YP_003217517.1| trans-2-enoyl-ACP reductase [Clostridium difficile R20291]
MNKICKILNIKYPVIQGGMAWVATASLASAVSNAGGLGIIAAGNAPKEAIKKEIVECKKLTDKPFGVNVM
LMSPFVDDIIDLIIEEKVQVITTGAGNPAKYMDRLKEAGTKVIPVVPTIALAQRMEKLGATAVIAEGTEG
GGHIGELTTMVLVPQVADAVNIPVIAAGGIVDGRGIAASFALGASAVQVGTRFICSEECSVHSNYKNLVL
KAKDRDAIVTGRSTGHPVRTLKNKLSKEFLKMEQNGATPEELDKKGTGALRFATVDGDIEKGSFMAGQSA
AMVKEITPCKEIIEAMVNQAREIMPAIEL
>gi|260686385|ref|YP_003217518.1| malonyl coa-acyl carrier protein transacylase [Clostridium difficile R20291]
MGKVALVFPGQGAQYVGMAKDLYENNAVAKSVIDEASDALNMDLKNLMFNGNEEELSKTENTQPAMVTHS
VAVLKAVQAQIDLKYNACLGLSLGEYSALVAADAIDFKDAVCLVKKRGKFMQETVPAGVGAMAAILGLDR
NVLENVVKDIQGGIVEVANYNSPGQIVISGENEKIEEAMVKCKEAGAKRAVKLNVSGPFHSSMLKEAGVK
LASELEKVNITKPKVDVVANVNADYYKNEGKDLLIKQVSSSVLWEDSIEILLNDGYDTFIEMGPGKTLKA
FIKKIASNKKANVNIYNIDGIDSLNEFVQNYRNGEI
>gi|260686386|ref|YP_003217519.1| 3-oxoacyl-[acyl-carrier protein] reductase [Clostridium difficile R20291]
MINLTGQVAVVTGGSRGIGKEIAKKLASFGADVVINYTSKEDEALKTKNEIESMGVKCTSIKCDVSKFDE
VNQMIDSVVSEFGKIDILVNNAGITKDGLLMRMKEEDFDRVIDINLKGVFNCTKAVTKPMMKKKYGRIIN
MTSVVGIMGNAGQTNYCASKAGVIGFTKASARELASRNININAVAPGFIETDMTRVLSDDVKESTLANIP
KKSYGKPEDVANAVAFLVSDMSSYITGQVINVDGGMVMQ
>gi|260686387|ref|YP_003217520.1| acyl carrier protein [Clostridium difficile R20291]
MFNKVVEIIIEQLGVEDKEITMETSLMKDLEADSLDAVEIIMALEDEFGIEIPDTEAENFKSIGDIVKYI
EANK
>gi|260686388|ref|YP_003217521.1| 3-oxoacyl-[acyl-carrier-protein] synthase II [Clostridium difficile R20291]
MNKRVVITGLGCVTPLGTGKEEFWSNIKSGVSGIDKITNFDASTYQTQIAGEVKNFHPEEYISKKELKRL
DKFAQFAIVSAKLAVEDANLDLDKVDRERFGVIIGSGIGGVEAIETQHKILLEKGNKRVSSLFVPMMIGN
MAAGQVSIFLGAKGPNTNVCTACASGTHSIGDAFKVIQRGDADIMVAGGSEAAVTGLAFAGFCNMKAMST
RNDDPKTASRPFDKDRDGFVMGEGAGIVILEDLEHALARGAKIYAEVVGYGLTADAYHMTTPAENGEGAA
RSMNMALKDGNVPLEEVDYINAHGTSTYYNDLYETMAIKTVFGEKAYDLCVSSTKSMTGHLLGASGAIEA
VVCAMSIEDSFVPPTINIQEVGEDLDLDYVPNQGKEKNIRYALSNSLGFGGHNATIVLKKYV
>gi|260686389|ref|YP_003217522.1| putative signaling protein [Clostridium difficile R20291]
MNFRLPKKRLPKKIIFICIILISIILFIKYDQNGLKEREIINKGKYMSESLVADKEYDEAKKVVKTSFES
IPEKKYNKVYNEVWDMLKTISYVPDGTKIVIDSLEKMRESDVKLSDECRFNIEKRLASVYIMDNNYSKAV
DLTVKSIKLAEKLGNNYEKARLDVDLASIFLNIGSYETGEKLIKDSFKIDIDEGEKNGMVRLYAIINLAE
IYVEEGEYDKAIEISSRIKDYKKFVNTDNYNDFDIMASIMKSNAYVGKNNIQKAKTFLEKADYLIKSDRT
VYILDKDMYYYMAMGNLEYKSENYNSAIDNYKKSLEISTKRKLTQEKIKNLNKILNIYEKQGNIESLNEY
QKMLINEYKENKSIRDSETSFYIIDKVSNESKLFEKTKKEIKYYKILFTVILIAILGSTFLYNRLKYFKA
QNLHDGLTNVYNRKSFDIMYEKYREKDDNFALVMIDIDNFKLINDNYGHKFGDTVIKGITNTICVMLEQD
DKVFRYGGEEFSVLIRNKSGEEVADIIDNIRVAIANKKWNDDVTVTISAGVAHISDSKDVLEEADKNLYK
AKQLGRNKVVYK
>gi|260686390|ref|YP_003217523.1| putative sigma-54 dependent transcriptional regulator [Clostridium difficile R20291]
MKQSIAIVTDKITKLSSFLEENIRLVLGNYIDINHYYLEVLKENDKIQGDFVLVMNDDRLNSMRKHLVQD
SKIIVIRRTLKENEIYGLFSIPNGTEVLVVNDTKETTLETISLFYKIGVKNLKFTPYIEGKIYKNIDIAI
TPGVKEKVPSYINKVIDLGNRYIDISTFIEIINGLRIDVKEIRKNLMAYSESLISLDNGVKDNYRQLFLK
IEEQDVILNLSKDGIIFTSADGIINTFNKEALKILGINENPQGKNIEDIISEDLNILLEDKEIIDEVVFT
NKKYINVNKKSIFSMGNKAGIYYNLQEITYIKKLEQNLTNKLREQGQIARYTFKDIKTKNKNMVKCVELA
KKISKSDLSVLIIGESGTGKELLSQSIHNASNRSNQPFIAVNCAAVPDSLLESQLFGYEKGSFTGALREG
KKGLFELANNGTIFLDEIGDMPPLLQTKLLRVLQEKQVMPIGSHNVINIDVRVIAATNKNLLKMIREGKF
REDLYYRLNVLPIDVPSLRNRKEDIITLMNFFLKNNVRLSPEVITILEKYNWPGNIRELQNVASYVSLMC
DSMVFRDDLPPYIRVECANNYEDGFGYTKKEFEEILRILYERRESSSGVGRGFIIEKLIQEGIEISESKV
RKVLSYLSECGYISSKSGRGGSQITSEGIKLYNNIN
>gi|260686391|ref|YP_003217524.1| hypothetical protein CDR20291_1025 [Clostridium difficile R20291]
MMKYKTTGTCATEIEFEVKENKVTNVNFIGGCDGNLKGLKVLVEGMNIEDVIQKLKGIECKTKPTSCPDQ
LSLALENYMNIK
>gi|260686392|ref|YP_003217525.1| putative glutamine amidotransferase [Clostridium difficile R20291]
MKPIIGILGNLIIMENGMFPGLERSYVNNDYINAVLKGGGSPVIIPVNTDKEVIKKQIEMVDGVLISGGW
DINPQLYGEETREETTFIYPEVDEFDLIAISIALELKKPILGVCRGLQILNVSLGGTLYQDNNLIEGSYI
KHTQSSKRHVATHKVDVKEGSILEGILGKQLLTNSYHHQSVNQLGKGLKAIAYSKDGIIEAIEKEEENFV
VGVQWHPEMMVDYCDKMEKLFKYFINICSNL
>gi|260686393|ref|YP_003217526.1| putative amino acid permease [Clostridium difficile R20291]
MNEKNKMGLISIILLGINAVVGAGVFLLPGDAMKSFGVASIFVYIFDMLLVLSMAFCFAEVAGKFNKNGA
AYVYTKEAFGDFCGFEVGLMKWVIGCISWGALIVGFPTSLSAVWAPAGEPHIQKIIIVAMIVGLTIINLL
GVSLSKIVQNVITVGKLIPLILFIGIGIFFIKGVNFTSSTMVPPGAGATEFGAAALLMFYSFTGFESIAV
AAEDMENPQKNIPIAIISVIVIASIIYILNQVVCVGILGDSLSSTSTPVADAARICFGNMGAGLVTFGTL
VSVGGICMCGAFVNPRSCVALADDKMLPRIFARKDKKGTPYVAIIATMLITIPIALSGSFAELAAISAVA
RFIQYIPTSLSVLVFRKKRPELVGTFKTPFGAVIPLIAVCVGTWLLFQASMHQLIMGLGALAIGVPLYFI
MKSYNRKVCGENLKKIV
>gi|260686394|ref|YP_003217527.1| putative acetyltransferase [Clostridium difficile R20291]
MGGETHFLSFGKDEYKISLEEQENAIESAKASDNSVKLIAFIDDEIVGIATIDSNQKAKGKHVGVLGIVV
KEKYWGIGLGKRLMLDLIEWCKSNGITKKITLVTNEENYNAIGLYKKVGFEVESILKKECYYNGVYTDLI
GMSLLLGI
>gi|260686395|ref|YP_003217528.1| putative fructose-1,6-bisphosphatase [Clostridium difficile R20291]
MKNLCKISDDYLNSKLKYLKLLSKQYPSISKASTEIINLEAILNLPKGTEHFITDVHGEYEPFVHVLKNG
SGVIKRKIEELFSNTIRDSEKKMLATLVYYPEQKLDLIIKQEENIDDFYRINIYRLIELCKYASSKYTRS
KVRKLLPENFKYIIEELLHEHVKSEHKEEYYKSIVETIVDIGIAKEFIIAISTVIQKLVVDRLHVIGDIY
DRGPRPDIIVDKLIEHHCVDIQWGNHDILWMGAASGEKTCIANALRISARYANLDIVEDIYGINLLPLAT
FAIEMYKDDPCKEFIPKVNDQSVTTTEKSLMAKMHKAISIIQFKLEGEVIRRRPEFEMEHRLLLNMINYD
EGTITLKGKTYKLKDTYLPTIDKKDPYKLTMEERNVIDKLVSSFRGSEKLQKHVSFLFSKGSIYLKANSN
LLIHGCVPLNEDGSFMSMNIMGKEYKGKALMDKMESLAREGFFFKDKAEEKLYGMDIMWYLWTGKCSSLF
GKDDMTTFERYFIEEKETHKENKNPYFKLRENEMACKRLFEEFDLELDESHIINGHVPVESKNGESPIKA
NGKILVIDGGFSRAYQKTTGIAGYTLIYNSRTLQLVSHEPFNSAEEAIANESDILSTTVVVEHKAKRKMV
RDTDEGVKIQEEIEDLKLLLMAYKKGLIKEM
>gi|260686396|ref|YP_003217529.1| stage III sporulation protein AA [Clostridium difficile R20291]
MNKLSDEIINSLSTTIREKVEKVSNNNLNIEEIRLRSQKPLILNANSKDYFYNQKTMTLDLNQQNSYVVT
REDVEQTFQIICKYSIHSFMDDIKKGFITLRGGHRVGLVGKAIVEDGQVKNIKHISSLNIRVSREIIGCS
DKILSHIIKGKNQINNTLIISPPQCGKTTLIRDIVRNLSNGNEDYGFKGLKVALVDERNEIAGAYLGVPQ
MDVGIRTDIIETCPKDLGITMLLRSMSPNVIVTDEIGSEKEIKALYTALNGGIGLITTVHGDSIDDIQNR
KELNRLLDKELFKKVIILSAKRGAGTIEKIYDLEEKRWYFAN
>gi|260686397|ref|YP_003217530.1| stage III sporulation protein AB [Clostridium difficile R20291]
MQIKIIIIALLVGSSYLIGEQIYKTYTRRHKQLNDLIRVLEILRMDLSFGLYTLEEIFNRIGGNKEFCFW
KFFYQISEGLHNEQSKTLEIIISENIDVLSKETYLGNKEIEELKNLILTLGKSDIESQQRMIDLSIENLK
KQTYETKEDINKKGVLYKKLVTFIGIGICIILI
>gi|260686398|ref|YP_003217531.1| stage III sporulation protein AC [Clostridium difficile R20291]
MGRFIMEISLILKVAGVGILISVLNMILEKTDRKDWAGLTTLAGVIIVLGMVITEISDLFNTVRTMFQLY
>gi|260686399|ref|YP_003217532.1| stage III sporulation protein AD [Clostridium difficile R20291]
MEIMQLIGIAIISTTLCLVIKKDRPEIANFIAIITGVIILLSVMFKLNFIVDSIQDLANKANIPTMYISL
IIKLIGIAYLMEFAIQLCKDCGEGNIASKLEFGGKIIVMSMSFPILLSIVEMVVNIIP
>gi|260686400|ref|YP_003217533.1| stage III sporulation-related protein [Clostridium difficile R20291]
MKKRFLPMIIGFLFTFFFVNIFAIMIFANEVPSSEDKEYGETKNSIDKYIDGQLDKLDINEIQDYINKEI
VINDVNLKSFVKDLISGEKNILDLFNKDGLKILMFDEFKASLKVVAVILVLALLSSILKSLENSFSSGAV
SQIATYIIFITMVSLTLIGFKDVLQICYDAIDHTVGLMQVIMPILITFLLLIGFPITSTTLNPIFIGGVT
FINVFFKNFLFVSITVAFGILIINNLSKNIRLKRFFSFVKQINYVSIGAMFTVYLGLVSIQGLYVTSFDK
FSVKTAKFAIGNFIPVVGGFVSDSVDILLSSSQLIKNIFGGIGLILLVGICLLPVIKILSVIVVYKLAAI
IVEPVGEDGISNFLNEVANLMIIMLASVIAITVMFFVTVAILTSISVVSQG
>gi|260686401|ref|YP_003217534.1| putative stage III sporulation protein AF [Clostridium difficile R20291]
MLEGIKAWIVSVLIGAFIVNIVDMILPSSKIKPYVNLVLNFMFVFIVITPVVGFFSKDMSLEDRILKSMG
NYNKQYVDSTNALAKETGNNSLSKGYEDGLKEVLKLKLDEYGYDLEDIELNGANINNIKIKEKNNSAKSN
NSSNEENKNNSTKREEENINSNDKENSKQVFKKGTEYGLNLNEEKLKNDLIKVLDVSIEDIQIDK
>gi|260686402|ref|YP_003217535.1| stage iii sporulation protein ag; flags: precursor [Clostridium difficile R20291]
MLKNLNDKDKRKVYSLITIAGICVVSLVLLSCFPSSKSDKQVGKTETNKNAEKQVTKKQEKDDLESKLTA
ILSKIDGAGDVDVMVTFESSEEIQPAFNSNNTTETTEEKDAQGGERTVTTSSENKTMITSNSSDPVVIKT
TEPKIKGVIVVASGASDPSVKETLYSAVQTSLQVAGHQVEIYSK
>gi|260686403|ref|YP_003217536.1| putative stage III sporulation protein AH [Clostridium difficile R20291]
MKFNYKGRGFVIITLTAMLVVVGTVNYQLSKKSLLETSKEFKAYEEAQLQKNTDDSDSSKTEDSSNVDKQ
GGKESADIDIVDSKASKVKEKATETSKEIKAQLSSEKNMKKASYILDMKMNREKQRNELVQDLNEMINNP
STTEESRKEASNMKLNIVKIQEKELQIENLLSTKGYEEALVYISDNKVNVVVNEAKLEKKDAAKIFDLVA
EQANVKYENIKLTNNNSNK
>gi|260686404|ref|YP_003217537.1| hypothetical protein CDR20291_1038 [Clostridium difficile R20291]
MEDNKFGQVKISNDVIATIAGLAALEVEGIETTATLTDKLLKNNGVKIQIEEEDVNLDVMVTIKYGMSIP
DTAFKVQENVKNTVETMTGLKVSQVNIHIQGISFKKDKVDKEEAKATKKN
>gi|260686405|ref|YP_003217538.1| N utilization substance protein B [Clostridium difficile R20291]
MKKDRAQKSTTREYIMKLIYQININKEDFETLEDKVDNFLKDNSEHIINRYKELALQYSKNTNLKLEDTE
IEDVIDKKYINTVCKALKENHDKIDELINKHAKNWTVDRMPKVDVSILRLSVCEILYLDTPNKVSINEAV
ELAKIYCDDKSPKFINGILGSVVDEIGK
>gi|260686406|ref|YP_003217539.1| putative O-sialoglycoprotein endopeptidase [Clostridium difficile R20291]
MKLGNNIIIGIDTSCYTTSIAAISLDKKVIFNEKIMLEVRDNSKGLRQSEAVFQHINNLGILSDRIKSFK
DKFNVEGVCSSKKPRPVENSYMPVFNVGHNFGKLLSSIYGCRFYETTHQENHIEASLLNSKLKNNNKFIS
VHMSGGTTEILLTSKQDSHHNVCDTNLGKIAKISIKKDDKSKLYNNFGYNIDIIGGSKDISFGQLIDRVG
IKLGYKFPSGKYLDENALNCNLKIESGLKTSVRDGYMNLSGLENQVNKIINDNGDNTNQKEYISKLVLDS
VVRNMFKSLVYLCETYNVNEVVFAGGVSASKYILRELSMKLRKKHIEAYFTEPQYSTDNAVGCAIIGLNN
FLGERV
>gi|260686407|ref|YP_003217540.1| exodeoxyribonuclease VII large subunit [Clostridium difficile R20291]
MKLRALDISEANSYIKRILINDPILSNLKVKGEISNFKVHSSGNVYLSLKDETSKLNCVIFKSNFNRNLK
LDNGVKIIANGYISVYERDGAYQLYINEIEIEGIGNLHIEFNRLKEKLNKEGLFDPKYKIPIPKMPNSIG
VITSPTGAVIRDIINVIKRRYPKVNIKLYPVMVQGDKSAEEICEAIRFFNHMKNVDTLIVGRGGGSIEEL
WSFNDEMVAREVFNSQIPIISAVGHETDFTICDFVSDMRAPTPSAAAEIATPSLDDINYKLGNIKSRMSK
SLTNQIELDQYRLETVFNKINNYLDSYTIKDKVIQLDKIYDKIIFGIENNLKLEDEKLVKIGALLHNLSP
LATMDRGYSITQKNGKVINSIKGLKIKDSIDIVLKDGNLECMIDKIENKEG
>gi|260686408|ref|YP_003217541.1| exodeoxyribonuclease VII small subunit [Clostridium difficile R20291]
MNLTYEEAYKRLESILSELESKNASLDESLSLYEEGISLYKHCNKLLDDAKLKISKFNQLGIEEDFKIEE
E
>gi|260686409|ref|YP_003217542.1| geranyltranstransferase [Clostridium difficile R20291]
MEFKQCLKEKASFVEKVLKEYMPKEEGYQKTVIEAMNYSLSAGGKRLRPILTLEACKIVGGNEDEAIPFA
IAIEMIHTYSLIHDDLPALDNDDLRRGRPTNHKVYGEAMGILAGDALLNYAFEVMLAGSINKENPEKYLK
AINEIAKGAGIYGMIGGQVVDVESENKQIEKEKLDYIHMNKTAAMMVGCMRAGATIGGANSEQMEEITKY
AKNIGLSFQIVDDILDIVGDEAKLGKKVGSDIENHKSTYPSLLGLDKSKEIAHNLIDEAKKSIEKLSDDV
DFLKGLAEYIIDREY
>gi|260686410|ref|YP_003217543.1| hypothetical protein CDR20291_1044 [Clostridium difficile R20291]
MDFFSEIFNNGALGISLIACFLAQFIKIFTGKEKRIELSRILISGGMPSSHSSFVTSLATVVGIEKGFNS
TDFAIITVLALIIMYDAAGVRRAVGKQATILNQMVADIQHGKHIEQKKLKELIGHTPLEVWFGALLGIVT
ALILM
>gi|260686411|ref|YP_003217544.1| 1-deoxy-D-xylulose 5-phosphate synthase [Clostridium difficile R20291]
MYKYLDKVNSPKDIKNMSIEEMDLLAKDIRKFLVKSVSKTGGHLASNLGVVELTLALHKVFDSPKDKIVW
DVGHQSYVHKIVTGRKDCFVSLRQFNGLSGFPKENESPHDIFDTGHSSTSISIATGIACARDIKKENYSV
ISVIGDGSITGGMALEALNQLGYIDTNMIVILNDNEMSIDKNVGGMSKYLSSIIRNSTVEKMTDEVDKIL
NVTQTGEILSKTAHRFKDKLMYSFSPQDCSFFDSLGIRYYGPIDGHNTKELIDILRKAKHKKGPVLLHVI
TKKGKGYRFAEEQPDKYHGVSKFDIKTGVTSAKVKSMSISVGEKLVDMANNNEDIVAITAAMPSGTGLNL
FESAYPKRYYDVGIAEQHATGFAAGLAKNGMKPYFAVYSSFLQRAYDQVIHDVCITKKPVTFLIDRAGLV
GNDGETHHGMFDLSYLNSIPNIVVMAPKDTREMELMMDLSLKLDCPLAIRYPRGSSYYLDKGEYGEIVLG
KYEVLDDGQDTVILCIGSMVKHALEAKEILSREGINPTIVNARFLKPIDEGMLKALLKNHKNVVTIEDNI
VTGGFGSRINKFIIDNEYNVNILNIAIPEEFVKHGNIDELYDFVGLSPKSIADKIRKLVIE
>gi|260686412|ref|YP_003217545.1| putative RNA methyltransferase [Clostridium difficile R20291]
MKKRIDLLLVEQGYFESRERAKKAIMAGLVFVDNQRCDKAGTEVKEDCSIEVKGNPIPYVSRGGLKLEKA
MKNFDLTIDGKVCMDIGASTGGFTDCMLKNGAIKVFSIDVGYGQLAWKLRQDDRVVCMERTNIRNVTIEY
TKQFADFASIDVSFISLKLVLPKAKELVRHDGEVVALIKPQFEAGREKVGKKGVVREKSTHIEVIKMISD
FSVENGFEILGLDFSPIKGPEGNIEYLIHLRNGNEGYEFDGETYNNKIVEVVEASHNLDK
>gi|260686413|ref|YP_003217546.1| DNA repair protein [Clostridium difficile R20291]
MKNCALVEELRLNIDKNLNILTGETGSGKSIIIDALGLCLGDKYDRSFLRKGTDKGLVEAVFFSDNRYLK
KILEENDISMEDDNLLVITRLIYSDGKSTARVNGRTVKVSLLKEIASTLIDIHGQHQNQALFNKDTHLKF
LDLFGENELEEFKIAYKNVYHKYSEVKKALNCLTENKDEMQIQREIDLLRFQINEIEAANLNKNEYEDLL
KQREVYRNSEKIYNNLNSSYSKLHNGEYNVIDLIGLASKELNDISKYDSVLSEYSDTVERIMYELQDISG
EIRNYKDNIDFEPYELEQIELRIDEINNLRRKYGDSIDDIFEYYGKIKDRLDEILNRDERVEQLKSKLMN
IEEDLKIKASKLTKARIEVATTLEKILLDELKSLNMKNVMFKVNFEKGSFTLDGVDDIEFMISFNLGEDI
KPIYKVASGGEMSRFMLAFKTILADIDDIDTLVFDEIDTGISGIAAQIVGEKLSDIAKKKQIICITHLPQ
IAANADTHYCIEKDTSNNRTFTNVSKLNESQRKNEIARLIAGNNITEKTIEHASEIIELAKKC
>gi|260686414|ref|YP_003217547.1| hypothetical protein CDR20291_1048 [Clostridium difficile R20291]
MNKKDTMHLIFIIVIFILLWYIVVAVSEINKNIESCSNKLDYLSQELMSTKSDISNTINEEMSKSYITKS
IDLKVKKIEKKECTIDVDVQLSKLGKNGKVFFMYKEDSDKWNETEMTKHGELSYACEIKINTGSEYDYKV
VTSGDISESSDVQKLTKSDYMPEQPIFNSGIRDNREYFIEIVENSNLFNHESEKSKNKAYDNIRLEKVDI
IVNEGKKDTIYKAQLAEGLDDGKTNNSNRNQVNYEVSFPKRDIDDIIYIKAKLTYNNGVEYTKDITEDIT
MGLQDLEK
>gi|260686415|ref|YP_003217548.1| putative acetyltransferase [Clostridium difficile R20291]
MKSLYKHVYIMADKMAQNITLQFVEEKDLENLENVKLLFTEYSNSLNIDLCFQDFNNELKTLPGKYKKPS
GSLILAFVDENLAGCVALKKLEGKICELKRLYVRNQFRGLKIGKILLEEIIVEAKKIGYTHMRLDTLPSM
KSAQGLYEKFGFYDIELYTYNPIEGARYMELKL
>gi|260686416|ref|YP_003217549.1| spermine/spermidine acetyltransferase [Clostridium difficile R20291]
MKDGNILKLNVRIADINNWHDLVSLSVDKSQLDYIESNALSIAESKFITAWVPVGIYDENSLIGFAMYGR
LEDDRVWLDRFMIDSKYQGKGCGKASLDFLVNHLKNEYNCDELYLSIFEDNKMAIKLYKDFGFKFNGELD
YGGEKVMVLKSN
>gi|260686417|ref|YP_003217550.1| stage IV sporulation protein B [Clostridium difficile R20291]
MNKINKNFKNIWIILGAVSIFTMVIIFNKNCNVNKETQIEAFTIKNHDKKFVYPMGNIIGVKANTDGVLV
LGYEEEDVGYIGGIQIGDNIVKIDNKRIKNSQDVSEILNKIKKSKVEVTFERKNKYKTEVIETKKENGKY
KLGLWVRDKISGIGTMTFYDPSMEKFKAIGHAIKDSDTNELLKIKQGYIYKPEQLKIVKASNEKVGKIKG
DFNDSNLMGNFSNNSELGISGNITENHNKEFNVANKEKQLIEVGRPQDVKIGDAVILFEDKNKNITSYDI
KIESIVYDKGNYRDMVIKVVDDKLLEYTGGIVQGMSGAPIIQNNKIIGAITHVFRDNPKKGYGIFIDEMI
KL
>gi|260686418|ref|YP_003217551.1| stage 0 sporulation protein A [Clostridium difficile R20291]
MGGFLVEKIKIVLADDNKDFCQVLKEYLSNEDDIDILGIAKDGIEALDLVKKTQPDLLILDVIMPHLDGL
GVIEKLNTMDIPKMPKIIVLSAVGQDKITQSAINLGADYYIVKPFDFVVFINRIRELVSNRVTQVEPKPR
PVQETQMTRSDFVKNVGNIETEITNIIHEIGVPAHIKGYLYLREAIKMVIDNVELLGAVTKELYPSIAKK
FNTTPSRVERAIRHAIEVAWSRGKVDTINQLFGYTVHNTKGKPTNSEFIAMIADKLRLEHSMVK
>gi|260686419|ref|YP_003217552.1| putative pyrophosphokinase [Clostridium difficile R20291]
MRVEAPIKVDRKTKKLAKRVESGEIAVINHIDIDEVAANSLVEAKIKLVINAAPSISGRYPNKGPGILTE
NNILIIDNVGEELFEELKEGETIEVVDGKIYRKGKFLGAGEVLDKYEVSHQIKAAYENLAVELDRFIDNT
IDYAKKEKGFILGEVEIPKVKTNYANKHVLIVVRGQDYKEDLSTMLSYIEEVKPVLVGVDGGADALIEFG
YTPDVIVGDMDSVSDEALKKASEIVVHAYTDGRAPGLKRVEELGLDAVVFPAPGTSEDIAMLIAYEYKAE
LIVAVGTHSNMIDFLEKGRKGMASTFLVRLKIGSKLIDAKGVNLLYRSKLKIKYIWALIATALFPVLVVA
SLSPGVQQFIQLMQLKFRVLLQM
>gi|260686420|ref|YP_003217553.1| hypothetical protein CDR20291_1054 [Clostridium difficile R20291]
MHINMKYYIVTIGAIFIALGIGMLVGFNLNNNQQLSEQQANIINDLDDKFNILKEKNDKLDSDLASVNRD
YEEAVNFINKNVDKILAGSLNGKSIGIISANENDDYTKNIEDIINKSNGSIAFNIVLKENITNPEKLKEM
STKLGTDVKNANDAVNYIIDTLKKEDASDILTYLQELDVIKFNSLGNTYLKYDSVVIAGGNDAKDSTKQF
EKIEKFVVSKLKSENKYLVEVQNTGVKTSYVELYSKNKVATIDNIDEGIGSISLAILLQQGNIVGNFGRL
DTATSLLPSIK
>gi|260686421|ref|YP_003217554.1| putative glycosyltransferase [Clostridium difficile R20291]
MDSYISIIIPAYNEESRIKYTLESILDIKQINEIIVVDDGSIDNTAKVVSELENEKIKFFKLDKNRGKGY
ALNYGIKLAMKNADIIGFLDGDLGSSAKEVEKLIVPILNGEADVTIAKFPPAKRKGGLGFVKGLAKNSVF
EMTGVELDATLSGQRIFKREVLEKFDEIPFGYGVEVGMTIDILKYGFKIKEVLVNMTHNETGRNLKGFIH
RGKQYYHIKKVLGQKKKEWR
>gi|260686422|ref|YP_003217555.1| putative glycosyltransferase [Clostridium difficile R20291]
MKDYILYTILLLTGLFGTYAVIPLFKNLLINGNVLRPNYKKDMIPVSMGIVFLPMIVINGIILAFFTTEF
KDLAYIFMFMFGMISMFFAGILDDVIGNRDVSGLKGHFKSLFKGSLTTGGFKALFGGFVGLIVSVAISKD
IIDIIVNTLIIALSTNLMNLLDLRPGRAIKAYLFIMVIIFLTLTGFVQVLPLLIVPNVLAYFNYDLKARA
MMGDTGSNVLGISIGMLISFGYPFNIRLGWLIFVVIMHIFTEKYSLTKIIEKNKLLNFIDKLGR
>gi|260686423|ref|YP_003217556.1| hypothetical protein CDR20291_1057 [Clostridium difficile R20291]
MISKRVGIVESIVSQTETLDDIRVNINGKIQRAYNYPKISGTINIGDEVVLNTTAVELSLGTGGYHFVIT
NLNNIESTLTEGGHIMKLRYTPLQIKVDSVEEQESIYHDKFANFKGLEGLSVVVGTLHSMLTPFAASFKR
NNPNKKLVYIMTDGASLPIYLSKNVDTLKEKKLIDSTITIGNAFGGDYECINIYTALITAKEILKADAVF
VSMGPGIAGTGTKYGFTGIEQGSILDAVKKLEGRAIAIPRISFADKRERHQGISHHSMTVFKEIVNVNVD
IPITIYDDEKLNFIKEQINLNGLDKKHNIIYIDNNKTKEDLDYFNLKVKSMGRNYEQDEAFFKAASTAAY
YLMEV
>gi|260686424|ref|YP_003217557.1| ADP-ribose pyrophosphatase [Clostridium difficile R20291]
MVLEEKTISSDRVYTGKVITLKVDTVEIPGQGYQKRELVEVGGAVGIVAITDDNKVVLVKQFRKPIEKPI
FEIPAGKLEKNESPKECAERELKEETGYSAKNIKLIHKFFTSAGFSNEIMFVYLATGLTPGENNLDADEF
LDVYEIELEEAYNMVLKNDVEDAKTSIGLLLVKDMFKN
>gi|260686425|ref|YP_003217558.1| hypothetical protein CDR20291_1059 [Clostridium difficile R20291]
MRRTYRKNDFRELNRQIIIIGLLFMMSIVVGSYINKILPGSSNNILNNINPAVEYYNLNISIKDTVIQNL
KSDAIFMGSIALLSLFVVTIPAVLVAFVLKGMSIGYTINSCILALKFKSIKMILIILFKNLIIIPCAIIL
ALISLSYFKEMVYEFKKKNRKNMQFLIKRYILNIIIIIALSLGLQLILNTVSIGIIKFLAK
>gi|260686426|ref|YP_003217559.1| putative tyrosine recombinase [Clostridium difficile R20291]
MDIIEGYIDYIKDKKKLSENTVASYFMDIKKYMEYINQKSIKLVDIVENDIISYLIKLEKDNVSIATIAR
MISSIKSFHDYLFLNHICTNNPAKDIKKPKIKKENINILTEEEIERLLNFPKLTTPKLIRDKAIFEVLYG
TGIKVSELVEMNIEDIDLDIDYIYCNSCCKNQRVIPLCDITKLYLEKYLKEARPKMAVEGEKSLFVSSLG
QRFTRQGLWKVIKKYSNLANIDKNINPTMLRHSFAIHLLNEGANIAVVSKILGNVNLSSLQVYLNHIDKN
VRREIKEKHPRNDVDVELQKAEAK
>gi|260686427|ref|YP_003217560.1| phosphopentomutase [Clostridium difficile R20291]
MSRVIWIVIDSVGIGALPDAEKFGDSKDVSTLGNIFKEYPDIQIPNMRNLGIGNIDGIDFFESIKEPIGC
FGKCKEMSQGKDTTTGHWEMTGIIVDKPFKTFEHGFSKEIIEEFEKKTGRKVVGNKPASGTVIIDEYGEH
QIKTGDVIVYTSADSVFQIAANEEVIPLEELYNMCKIAREIMMGDNAVARVIARPFIGKKKGEFVRTSNR
RDYSLDPFEPTVLDNIKESGLDVLAVGKIEDIFNGKGITDAIHTKSNMDGVDETLNYMKQDNKGLIYSNL
VDFDSKYGHRRDPEGYKKALEEFDSRLPEIMANMREDDILIINADHGNDPTYKGTDHTREYIPVMIYGNK
IKKGFNLGVKDTFADIGATVADILNVKLPKHGSSFKEDLF
>gi|260686428|ref|YP_003217561.1| purine nucleoside phosphorylase [Clostridium difficile R20291]
MFEKIAQSSKFINSKSNIKPKIGLILGSGLGDLANDIEDPVTIKYSEIPNFPVSTVAGHAGQLVIGKLEG
KEVIAMQGRFHYYEGYSQKEATFPVRVMKELGVEILIVTNAAGGVNKEFKAGDLMLIRDHINFSGSNPLV
GKNDDRFGARFPDMSDAYSSKYVDVVKNCAKECNIDVKEGVYMFFSGPNYETPAEVRMAQILGADAVGMS
TVPEVIVASHSNIGVIGISCITNMAAGILNQPLSHEEVIETTQKVKSEFMNLVKTTVKNL
>gi|260686429|ref|YP_003217562.1| pyrimidine-nucleoside phosphorylase [Clostridium difficile R20291]
MEISIMRMYDIIKKKRDNLELSKKEINYFIENYSKGDIPDYQASALLMSIYLNKMNKQETVHLTEAMMNS
GDMINLSEVDGIKVDKHSTGGVGDKTTIALIPLVASCGAPVAKMSGRGLGHTGGTIDKLESIPGFSTEME
ISKFIDSVNKSKIAVCGQSAKVAIADKKIYALRDVTATVDNISLISSSVMSKKLASGADAIVLDVKTGDG
AFMKTLEESFELAKSMVDIGTGMNRDTIGIVTDMDEPLGFAVGNSLEVIEAIETLKGNGPKDLVELCEVL
GAYMLVLSKVAHDFEDGVEKIRESIKSGTAIQKLKEFIENQGGNKDVVDDYSLFKKSKYKYPVKSIKSGY
ISKIKAEDVGVSAMILGAGRETKDDILDLSAGIILEKKVGDYVNEGEVLAYMYYNDEQKLSLAKGRFIDS
YSIVDSKIEKNKLIYGIVTKEEIKKF
>gi|260686430|ref|YP_003217563.1| putative exported aminodeoxychorismate lyase [Clostridium difficile R20291]
MNFKENRLKIAVLIIVILIILAGIFVFIQIGPYDKNNKKDVIIDVPSGASVGKISDILYENKLIKNELLF
KLLVKVSNKAPSIKSGTYLLNQSYSNNDIISLLVSGKIYQDGIKVTIPEGATSKEIIAMLVSKNLGDKAT
FENLIKKPQEFYDKFPYLKEDGITSLEGFLYPETYYFNSKKQSEEDILSEMLKVFDSKYTDKFKKKQKEL
NMTLQEVMEMASIIEKEAVLDKDRPIIASVFYNRLKVGMPLQSDATIQYIFEERKKIVTYDDLKIDSPYN
SYKNKGLPPTPISNPGIKSIEAALYPEKTDYLYFVAKIDGGNNYSTNYQDHLKYVKEYKEARDKQSKDTK
ATNKENTKK
>gi|260686431|ref|YP_003217564.1| putative O-methyltransferase [Clostridium difficile R20291]
MSNIVNDLVEDYIRVTLKEKEGFLKDLEIYAEENSVPIIHKEVSDLLKVLLKVQKPKRILEVGCAIGYSS
IFFASIIGKDADIITVERNEKMIEKAKENIKLAGFDNNITILEGDAEEKLSQVQGEFDLIFIDAAKGQYK
LFFDLVIDKLKDGGLLVSDNILYKGMVAHDDFVVRRKKTIVKRMRNYLDYICNCDYLSTSLVPIGDGVAL
SYKESKRGDVDGIK
>gi|260686432|ref|YP_003217565.1| putative protease [Clostridium difficile R20291]
MELNKVELLAPAGDLERLKIAITYGADAVYIGGEIFGMRSAAKNFSKEDMAEGVAFAHERGKKVFVTVNI
IPHNEDFLQLEDYLLELEEIGIDAVIIADPGVLSVIKKVIPNMEIHLSTQANTTNYLSANFWYEHGIKRV
VVARELSFDEISEIRAKTPLDMDIEAFMHGAMCISYSGRCLISNYMTGRDANKGSCAQSCRWQYHLVEEK
RPGEYFPIYEDERGTFFFNSKDLCMIEYIPELIKSGITSLKIEGRMKTAYYVATVVRAYRMAIDEFYRAP
ENWKFNPMWMEELKKGSHRHFTSGFYLNKPTTEDQNYQSASYVRNYDFIGIVRETEDEDGLIVVEQRNKM
CVGDEIEVMGPYKETMFTKIEEMYNEEGEAIESAPHPRQIVKLKLSVKVGKDYMLRKVIEEKVEE
>gi|260686433|ref|YP_003217566.1| putative penicillin-binding protein [Clostridium difficile R20291]
MSKKKTPFLKKVGKRSWCIFTIILIIYSVLIYRLVDIQVLKGDKYKQSVESQSVEKVELNSGRGIIYDRN
NKKLTDTSKSQVLIVEKEKLNNNYKILELIKKATKMNDLDIYKAVQEQLTRPIIQIQTKNIDKSMKKELE
KNGIMVEEKTMRYAKDGLLSHTIGYIKEDDKSGQSGIEKSMDSVLRNSNEKYISAFKAGDAGNEKSLNIL
KGSVKTVDNKDKDRHLKTTIDYNIQKKLEQILNKEENPTAAIISEASTGEILAMCSRPNFDQNDISKSLK
GKNGEFENRVIKATYPPGSVFKMVVLFSALENGVIDENYTYNCTGKTKVGNTNEILRCNKRDGHGFQNLR
QAFSNSCNPAFLDIAMKLGKEKILKSAEKLHLFEKVDIGLDEEKIREAPKNISIRNLAIGQENIEFTPLQ
INQMTQIIANNGTFKPLYLYKSLVDNNMNTIKTYKSSKKEELISPYVCTQVKEYMKSVSRIGTAKDLKDI
EGGCGVKTGTAQSSLNKKAIDHGWITGFYPEERPKYVITVLVEGTQKGNKSATPIFKEICESIK
>gi|260686434|ref|YP_003217567.1| site-specific recombinase [Clostridium difficile R20291]
MKDQGIILETFKESKTKIITPRKTYDLTDEFDEEYSEFEAFMARKELKLISRRMQRGRIKSVEEGNFIGT
SAPFGYDAVTTGRKERILVPNKDADVVRTIFDLYINEDMGCSKISKYLNNLGIKTATGANWYNSAITNII
KNKVYCGYIQWQKKDYKKSKNPNKIKTVKLRPKDEWIEAKGKHEPLISEITWKKAQNILKKNGHVSYGNQ
IKNPLAGIVICKNCGRPLVYRPYADHDYIICYHPGCNKSSRFEFIEAAILKSLEDTVKKYQLKACDLDLD
KNNKDSNIEFQKRVLKGLETELKELGKQKNKLYDLLERGIYDEDTFIERSNNISSRTEEIKDSIKTVKNR
LSTVKKDNSKIIEDIKTVLSLYHDSDSLGKNKLLKSVIDKAIYYKSKEQKLDSFELMVHLKLHEDQ
>gi|260686435|ref|YP_003217568.1| putative lipoprotein [Clostridium difficile R20291]
MIISKKITAILVSFLIMISMVGCAPKESATEVAKKYLDSIEIKDYEVAYNLLSKDSKESVSLEKFEEYQD
TLFKLQTLKDYKLGEENKVEKYKYSNKEYTNLVKIKETDTIKYITENKEDTANFDRYFIIEDNEYKLLWH
KDFKRALSSNYVKIARSETKKDEDKDYNKAAIDIKKAIEIDDKNPLAYYTQSYIYIELQRYDEALKSIDK
SLEYLDKNNEAYKIDASDAYNLRGVIFMSKSEFNKARESYNKALELNPDNEYAKTNLNDIKGL
>gi|260686436|ref|YP_003217569.1| cell surface protein [Clostridium difficile R20291]
MKIKKLLTIGLSLSIFIASCPISANALDKIESIKGADKYETAGIIADKQNYTTAILINADSTMADGLSAS
GLAGAINAPILLTKKNNIPNATLKRLEKAKKVYIIGGENSINKYTETVLKGKGIEIKRLQGSDRIKTSYN
VAKEINSINKVNKVILTNAFKGEPDAMSAAPVAVRDKAAIVLTDGKSVPFNTTGVESYVIGGTSSMNDKL
VKDTNSTRLGGTDRYDTNKKIINKFYSGVKEFYIASGTDLVYALVGSTIAKNNAIVLVGNDSNKSVLKST
IKLTAIGNLSDSILQQCLNVTKNIGDSNTGREYTVEDAANAVKKLLGVKKFYYEPNYSEDEDLIFLLDKN
FDFSGKEYYVFAYIKQGAEGDVRYCVAKNDMSKVYTYDVNGNMKVCNPDDYKNKGSITEEQAKQIALKEC
AKRHKVSINNLVVDMIDFRDDIYSGNVYAVKINSKNSNGTFGWFFIDIETGKIYN
>gi|260686437|ref|YP_003217570.1| hypothetical protein CDR20291_1071 [Clostridium difficile R20291]
MSKTKVSSEQKIEAIESYLKGENSVIKIMEELNIGKRTFREWMRNYETFGNDGLIKQSHKSCYSKEFKLN
AIESYLNGEGSYDTISKKYKMRSVHPLKAWVKEYNLHKVIKETPKGGLFMETRKTTLDERAEIVKDCIEH
DLNYNLIAKKYFVSYSQVRRWTLKYKENGIDALEDRRGKAKKEDELTQLDEIKLELKIVKAEKHKLQLEN
EFLKKLKIIERGW
>gi|260686438|ref|YP_003217571.1| integrase, catalytic region [Clostridium difficile R20291]
MVITLSKNEDKYKAIQSLFNEKKASLIQLCEIAKVNRSGYYKWLNRDKSNLELENIKLATLITKIYEEKK
GVFGSLRMTLQLNREYKLNVNHKRVYRLMRAVGLRSICRKKKFSYVKCTPEVIAENVLNRKFSADKTSQK
WLTDVTEFKLTNGTKAYLSAILDLGDRSIVSYVIGKSNNNNLVFETFNKAIEVYPNAKPIFHSDRGYQYT
SRVFKSKLLTQGMIQSMSRVGHCIDNAPMEGFWGILKVEMYYLRKFDTYEQLVKAIDDYIYYYNNFRYQK
RLNSMSPLEFRKYLSTEIA
>gi|260686439|ref|YP_003217572.1| hypothetical protein CDR20291_1073 [Clostridium difficile R20291]
MSSYFITRGDVMKILQQFKPYKYDKEKNIEYDEKIIANQNTEVYIVYPRISDEENRRRWEEFNEVAKEVA
INIAMKKVETVES
>gi|260686440|ref|YP_003217573.1| hypothetical protein CDR20291_1074 [Clostridium difficile R20291]
MRKKFFIGILIVLIISVIAILNIKNDKNVFIGESENWKAKFVTTEGHSKLEIKYKNSKDVVEQKFNYSYQ
FIDGEDAVVVVKNEILEAGQEKAIKIQRPGLYSNRESSYKLIISWNGNEETINLKKK
>gi|260686441|ref|YP_003217574.1| hypothetical protein CDR20291_1075 [Clostridium difficile R20291]
MNYRLKKSVTTILSLLIMTILLPTNASASKVEDSSMKVMYSEKQVTDMDKLYDMAKNGITDVKSSNEKGI
IKNARTGESIYVDSISTTQLLEVKQSKNLTSKIYSKTVFLILIQ
>gi|260686442|ref|YP_003217575.1| hypothetical protein CDR20291_1077 [Clostridium difficile R20291]
MDFGNINLILIGIIVIIGTTIIYLIKPKTAFCSKKYFNKLESIYGNIDKKKTVKLEVLYRYVTGLEYISI
GLFTRRLDITIIAIILVATITVILYYLVRKRYITI
>gi|260686443|ref|YP_003217576.1| hypothetical protein CDR20291_1078 [Clostridium difficile R20291]
MKLRNPKIKKLLSVALLAALIGIPIGQTANAMEISNNVPSYIENNPTTIEDLEINDSQLPKPGTVTYIDI
NKLIKNLKENGIDTTLIENELYYRKAGTNKIVWTKTGFDLYLSKGVALTLAGAGTGVAGLLAGAIPGIGQ
YLAAAIVGAITMHLGSNITSGKIFKFKKMRYNKGGAYVTKYYLQSVRNQ
>gi|260686444|ref|YP_003217577.1| putative teicoplanin resistance protein [Clostridium difficile R20291]
MKSRKHNITKGLFIVYIIILTWIILFKLQFDISSLETMNLRSINLVPFAGSLIINNRVDISEIILNVAIF
VPFGIYVCMLKEEWSFIKKVIPIFITSLAFETLQYIFALGASDITDLIGNTLGGIIGIAVFMLLSKIFKN
NTIKIINVLALIVTIIVVLFLGLVIFANL
>gi|260686445|ref|YP_003217578.1| putative phage-related DNA-directed RNA polymerase 7 kDa polypeptide [Clostridium difficile R20291]
MSVIVMCSRCGKEIDKYRNKYITYYEKNTNAEIKVCINCALDLLEKTRENQELNIREFQDTIIL
>gi|260686446|ref|YP_003217579.1| hypothetical protein CDR20291_1081 [Clostridium difficile R20291]
MFLLLKIRKSGFISIECIISIAILYVAVYLVSTSLYNCYSFISRNISDREMLSTAKKYIEDEKYRIQNSK
YELIEDKIEKNYINGYEINSRIEQILDYYQCYEINIEIKNEFKKLRFNSYVTRK
>gi|260686447|ref|YP_003217580.1| hypothetical protein CDR20291_1082 [Clostridium difficile R20291]
MLLENKGSILIITLIIFSIISTVCIMCIGLIYTHNNMFELGYKDIQLKEISLSGIEISVSNVLSCVEEAI
DVSNNEDEFREYFLGNNMIECIKKIKDTSYSSLEELSLKVENNTIYDRGDFFEFDIESNVREKEFLKAIK
VRVKIKNPWIGIDIEDYMDKSNNNKIDDKTFNNYKASENNEILNQFKNESENIRNQEVVEFTEEDEEYEE
ELKQNIIENIKKNFDEKKLVQVYKYRGV
>gi|260686448|ref|YP_003217581.1| hypothetical protein CDR20291_1083 [Clostridium difficile R20291]
MYNFEKRRNVTVIELIVSISIILLIVTLSFPKDNLENHKINLFARQLCSDIRYVRRINMFSNYNTYIYYI
NQGKHEGYVLRKDGKNIKSIMLPKNAKIARSIEIIKFKSDGSPQKASTIEIYNNRLRKTITITPVSGRVL
LKEGKYET
>gi|260686449|ref|YP_003217582.1| hypothetical protein CDR20291_1084 [Clostridium difficile R20291]
MKHKYGYLLLESVVSLSSMVIIILVLYSIFLSTINLKLKVEDKIELQQQSLEIIKSMEGIISNSMGIMNV
SNYEETFKKTTSIKCRYVDENNNEESISNKEIILNERRNKLFVNSLNGESSQAGGYEIGDYVDEMYVLIT
NNGQYVNIKLKLSKRSQKYETDFKIKVWNFSESI
>gi|260686450|ref|YP_003217583.1| elongation factor P [Clostridium difficile R20291]
MEEQKMVSAGDFRKGVTFEKDGQPCLVVDFQHVKPGKGAAFVRTKYKNLKTGAIREESFNPSEKFPKAVI
DTRQMQYLYNDGELYYFMDQENFEQIPLNYEQVEDAIKFLKENEVATIRFYQGQPFQVEAPNFAELEVTD
TEPGIKGDTASNVTKAATVETGAVVQVPLFINTGDKVKIDTRTGEYLSRV
>gi|260686451|ref|YP_003217584.1| hypothetical protein CDR20291_1086 [Clostridium difficile R20291]
MKHLYEEVAYLKGLAEGLEISAESKEGKMIHKIVDALEVFADAIVTLDEEQEELQDFVESIDEDLADLEE
DIADMEEDLYEEDDDEDDEDFSYIEMECPNCGELVEIDEDLLYDDEVDVVCPDCKAVILSSEDDCDDDCT
CGGCPSCDDRE
>gi|260686452|ref|YP_003217585.1| putative ribonuclease III [Clostridium difficile R20291]
MKISKKLLDNIQRFENVINYKFKNKEYILEALTHSSYSNENKKYNFNERLEFLGDSVLGIVISDYLFNEE
ANLPEGELTKLRANIVCEDSLSEVANDINLGIHMLLGRGEEATGGRHRTSILADAFEAVIAAIYLDGGFE
SARQFILHHMENIIYDSRKGNIFRDYKTHLQEVLQGNGENNIWYRLIEEKGPDHNKRFVMEVGINDDVLG
IGEGKSKKEAEQLAAKIALKKKLWEK
>gi|260686453|ref|YP_003217586.1| radical SAM-superfamily protein [Clostridium difficile R20291]
MKKRIIPIFVPHKGCPHDCIFCNQKKITGVSTDVTSEDARNIIEECLETIDKDADVEIAFFGGSFTAIDI
DIQKSLLSVAKEYVEKGLVKDIRMSTRPDCIDEDILSMLKEYKTSIIELGVQSLDEKVLLDSIRGHQSEI
VYKSSKMIKNSGIKLGLQMMIGLPADTEEKCIFTAKKFVELKPDCVRVYPTLVVKDTGLEKLMEQNKYNP
FTLEESVNIVKKVLVLFYVNNINVIRVGLQATDDIQIGKAVLAGPYHPAFRELVEADMIKDYLEFVILQN
KNIKQMLVKSNKKNISKIIGNKKTNVKYMEEKFGVLLKTQESDLDINQLEIVLDGKSLISANMRDIHRKL
YDIYDL
>gi|260686454|ref|YP_003217587.1| chromosome partition protein [Clostridium difficile R20291]
MYLKRLELKGFKSFPVKTDIIFKEGITAIVGPNGSGKSNISDAVRWVLGEQSIKSLRGDKLEDVIFAGTD
TKKPMNYCEVALTIDNSENQLELDFTEVTIRRRAYRNGESEFFLNNKSCRLKDIKEVFLDTGIGKDGYSI
IEQGKVDEILSNNPLSRRKVFDEACGISKYRYKKQEAERNLSNTKENLERIDDVYIEIENQLKPLFNQQT
KAKKYLEISEKLKILEVNSFIREIEGIEKELSEVNEHRKVIEKELNEKEEQKNVVEKKQEDINKEVEVLQ
DVIEKSVDYINSIKGVISKKESQINLIKERIRNFTNEISRKNLEINDIKEKLNENKQYIKELESNKLSGS
EELSTLQENIKVLEASKDKQKIKLESLNNEIELLKESIIDILNKKQEFSNKLSTLNANKENMNIRDENIN
SEITELNKNIEIKSSELDTINKEFNMQNENLKNVNNRHKELSINLQDSISEHNKLEDEIQKSKYNLNGYN
SKLNVYIDMENHYEGFNRGVKEVLKNKNLKGVHGALGQIINVPEKYEKSIEAALGAYMQNIITDNEFSAK
SAINYLKQNNLGRVTFLPLNIIKSNKVSLGNLKANTKFIGIASDLITFDEKYRNIIENILGRTILINNID
EGIKFAKETGHRFKIVTLDGEILNPGGSLTGGSLKTNGNILSRKRYINEYTEKISNIKNEISHLELKRES
LDKDVKNIKNEIDSHESKIKDLEKSIIIKSTSIKNVESEIESLKGSITKLENEKNDLNSNLNYTLEKSDD
VRKDMEELDDLYNKNKEKIDALNEEIKRYNDLYDKEKSEFDELNLSLVKKTEAYNSIVRDIKRISGENCE
LEEKNKQLEESLNYEEHEIIKLQDSIATEEKEKENLTKQLGDSNRNLETRKIAKDDLKNSFDEINKELKT
IDRQHIELKESLFKVGGRLERLKTSQDTYINKLFEQYDMTLVQALEIKDEDLDIDRKFLESLKREIRSLG
NINIGSIKEYEEIKERYDFYSEQKQDLEESMEEIEKLIHTLEENMKSEFEIKFEEISKNFKYVYKRLFGG
GCGELTILDKENLLESDILITAQPPGKKMKNLNLLSGGEKALTAISILFAILITKPTPFCILDEIEAPLD
DANIFRFGEFLKDLSKETQFISVTHRRGTMEAADYIYGVTMQEKAISKVISLKLKEAQEITDII
>gi|260686455|ref|YP_003217588.1| putative signal recognition particle [Clostridium difficile R20291]
MLKKLFGFGKDKEKEIEKKDAEEEIEVEDSVDSLENLEETIFSGLEEEVIDKVEDIEEKTEESVNNEGTE
EIENFEKIEVEMDSNAKEVENISNNDSQEEIIEELENYDEIESKEIEDKEDKKVNLFERLKQGLTKAKQG
ITDRIDEVLKSYTKIDEELLEDLEEILITADVGVNTTMDIIERLRDKIKQKGITEPIKVREELKSIVEDI
LTNENSTLDIEPAPCIILMVGVNGVGKTTTIGKLANRYKKDGKKVLLAAADTFRAAATEQLEIWANRTNV
DIIKHQEGADPGAVVFDAIKAAKARKTDVLICDTAGRLHNKANLMNELGKVFKIVDREFPEAKREVLLVV
DATTGQNAVVQAKTFKEVADITGIVLTKLDGTAKGGVVLAVKSEVDVPVKLIGVGESVEDLQDFNAKSFS
DALFGN
>gi|260686456|ref|YP_003217589.1| hypothetical protein CDR20291_1091 [Clostridium difficile R20291]
MNIEKMVEIGLLFEQYKELLTDKQKEIVALYYEEDYSLGEISENLNVSRQGVYDTLKRSEKILRDYEEKL
HLVSKIQEQEKNIKIIKDKIIDIKEDLLHNRDCANLIPKLENIEDVCREMIK
>gi|260686457|ref|YP_003217590.1| signal recognition particle protein [Clostridium difficile R20291]
MIFEGLSDKLQGAFSKLKSKGKLTEVDVKNAMREVKLALLEADVNFKVVKDFIKKVQERCVGQEVMQSLT
PAQHVIKIVNEELTSLMGDVQSKVMISSKPPTILMMVGLQGAGKTTTAGKLGGYFKKQGKKPLLVACDIY
RPAAIKQLQVVGEKLDIPVFNMGDKENPVNIAKAGLSHAIKNANDLVIIDTAGRLHIDEVLMAELKSIKS
EVKPHEILLVVDSMTGQDAVNVAESFNEALGVDGVVLTKLDGDTRGGAALSIRAVTQKPIKFMGMGEKLD
DIEPFHPDRMASRILGMGDVLSLIEKAQENIDLEKAKELEQKIKKQELDFEDFLQQMEQIQNMGPLDKIL
GMIPGMGNVKDQLGDVDLNGKEMKRTKAIIQSMTTYERRNPGVLNASRKKRIAKGSGTSVQDVNRLIKQL
NEMKKMMKMFAGSQKSMKKRGGLGGLPFFK
>gi|260686458|ref|YP_003217591.1| 30S ribosomal protein S16 [Clostridium difficile R20291]
MAVKIRLKRMGANKKPFYRIVVADSRAPRDGKFIEEIGYYNPISEPKQVRINDEKAIKWLATGAQPTEVV
KKLLVKNGVIEKFEASKQAK
>gi|260686459|ref|YP_003217592.1| hypothetical protein CDR20291_1094 [Clostridium difficile R20291]
MKELVVDIAKALVDNPDSVVVEEFEDNDGIVLKLTVAQEDMGKVIGKQGRIAKAIRTVVRSVANRENIKV
SLEIV
>gi|260686460|ref|YP_003217593.1| putative 16S rRNA processing protein [Clostridium difficile R20291]
MKEKLTHFKVGQIVNTQGLKGEVRVYPLTDDIERFDELKDFYLGKDLNNKLAVEKVRYKGSMVIMKIKGI
DSIEKAEKLKNKFMYVSREDSRELEEGEFFIADMIGMEVLTVDGKYVGILEDVLQYSANDVYVVKGEEDK
EFMIPAIKKFVPTIDIDERKMIIDPIKGMID
>gi|260686461|ref|YP_003217594.1| tRNA (Guanine-n(1)-)-methyltransferase [Clostridium difficile R20291]
MRFHIMTLFPEIFNSYMDESIMKRAVEKGIIEVYIYNIRDFSNNKHKKVDDYPFGGGVGMVMTPQPIYDT
YKHIITTHNISNPSVIYLTPKGKVYNQSIAKQMSLKEDIILLCGHYEGVDERIIDLIVTDEISIGDYVLT
GGELPALIMIDSISRLIPGVLNQEESFEEESFKDNLLEYPHYTRPRDFEGLKVPEVLLSGNHKKIDEWRR
EESIRITKERRFDLYKKSNEK
>gi|260686462|ref|YP_003217595.1| 50S ribosomal protein L19 [Clostridium difficile R20291]
MNEMLRAIEQEQLKNEVPNFGPGDTVKVHVRIIEGKRERIQVFEGVVLKRQGGGARETFTVRKMSFNVGV
ERTFPVHSPKIEKIEVTRKGKVRRAKLNYLRGRVGKAAKIKEARNK
>gi|260686463|ref|YP_003217596.1| putative GTPase [Clostridium difficile R20291]
MIHVSNEYEEYLMDDNLHINWYPGHMKKTKELVKNNLKLIDVVIELLDARIPFSSKNPDIDRLVGDKPRV
VVLNKSDMADRDKLNQWIEYYKKINIKAIPVDTIKGVGINNIIEECKNVTREKMSSLKDKGRKERAIRIM
IVGVPNVGKSSLINKLTGRKSTQTGDKPGVTKGKQWVRLKGNLELLDTPGILWPKFEDQEVALNLAFSRA
IKDEILDTETLALRLIEKLMKIEPEKLKARYKLDCLGETPIETMDMIGHKRGFITGKKELDYTRIAATVL
NEFRDGKIGNITLEVPENVKR
>gi|260686464|ref|YP_003217597.1| branched-chain amino acid transport system carrier protein [Clostridium difficile R20291]
MGKTKDVIVFGFALFAMFFGAGNLIFPPYLGIITGPEWLIAFLGFTFADAGLALLAVMATAKFDGNVVEM
FKRCGMKLGILIGCADILCIGPFLAIPRTGATTYEMGIMPLFGTSIPVLLFCILFFALSYVLTIRPSKVV
DIVGQFLTPALLIALAFIIIKGIISPLGDIVDKPMIPNVFAEGIGQGYQTMDAFAAIALASVLIVSLNDK
GYSTISDKLKMIGKAGVLACGGLALVYGGLCFLGATVSTMYGTDAVQSQVIVNITEGLLGNVGKAILAVV
VSLACLTTSIGLTSATGQYFSRLTKGKLSYEKIVLAVSVFSAVVASFGVGTIIKIASPILSIVYPPSIVL
IILAFFNEKIKNDNVYKGAVYMSLLVSILTVISSYGVDVPVVKSLPLHSLGFNWVVPVIIAGIIGNFIPS
KSQSNTLGTN
>gi|260686465|ref|YP_003217598.1| branched chain amino acid transport system carrier protein [Clostridium difficile R20291]
MGEKQINFKDVIVIGFALFAMFFGAGNLIFPPYLGVLSGSSWLIAFIGFLFADGGLALLAVIAATKFNGD
TSKMFSRAGKGLSIALGCAMVICIGPLLAIPRTAATTYEMGILPTIGSGISPVIFSIVFFALVLVLTIRP
SKVVDIVGSILTPALLIALAVLIVKGIVSPLGEIRDSSLIQNVFAEGITQGYQTMDALAASVFASIIIMS
VIAKGYTGEKEKMKATISAGVIAVIGMALVYGGLCYLGATVSQQYGQDVQQTALIVAITAALLGTTGKIL
LAIIVALACLTTAIGLSSAAGQYFSTLTDGKLKYEHIVIVVCVFSAIISNFGVSTIIKFSSPILSMVYPA
TITLVILALFSNKIKNDNVFKCAAYMALLVSVLTVATSFGVKIPLVNSLPFASLGFNWIVPVVIAGIIGN
FIPSKSSKTA
>gi|260686466|ref|YP_003217599.1| putative ribonucleotide-diphosphate reductase [Clostridium difficile R20291]
MKYIIKRDGTKELFSKSKIEDAVYKASINSEGGVDRELAYDISRKIANDYNSMEKCLSVEEIQDIVEVLL
MESNRKDIAKHYILYRERRSEIRTKAWEFDELQKSIWKNKYRHNGESFDEWIKRISNNSSRISKLIRQKR
FLFAGRILANRGLQKEGKKVTYSNCYVIEPPKDSIEDIFDTAKKLARTFSYGGGVGIDISKLRPKGAKVN
NAAKHTTGAVSFMELYSMTTGLIGQRGRRGALMISMDVNHPEIEEFIDIKTDLEKVTKANISIRVTDEFM
QAVREKKLYNCTFEVETTGEKIVKIVNAYDLFNKFVKNNWDYAEPGILFWDKIKTYNFMSEDKNFCFSGV
NPCAEEPLPSGGSCLLGSINLSEFIIQPFGEHATFDINKLKSCVREAVVALNDVLDEGLNLHPLQEQRDS
VHKYRQIGLGVMGIADMLIKMGIRYGSDESLELCDLIGKTMLNEAVKQSALIAKEYGTFSEYKYENISKS
KFFIENLNEDTKEMVKKYGLRNSQLLTIPPTGSISTMIGISGGIEPIFNLSYIRKTESLHDEDVYYKVYT
PIVKEYMDKKGITDEECLPDFFVTAMNIGYEERINMQKVWQKYIDASISSTINIPFETTVEDVFNIYIKA
WEAGLKGVTIFRDGCKRSGILINEKKEENNKEDKKENSKKEYYKNNKKEKDNKDEKAKEIINKNFEEDEK
FVCPECGSEGIAHTGGCSICLKCGYSGCN
>gi|260686467|ref|YP_003217600.1| ribonuclease HII [Clostridium difficile R20291]
MQDKSVREIKEIIETLEVEKYMEYIELLRVDERKSVQGLAIKLAKKLDNIRKEEERLETINIFENEGYDK
GYLYIGGIDEAGRGPLAGPVVASVVVFKKDTKIEGVNDSKKLSEAKRDELFEVIKEEALDYGIGIVNNEE
IDEFNILNATYMAMKKAINCLKKAPDYLLVDAATIPGIDISQNPIVKGDSKSISIAAASILAKVTRDSIM
YQYDRVYPEYGFKSHKGYGTKEHYEAIEKYGITPIHRKSFLKNIL
>gi|260686468|ref|YP_003217601.1| putative FMN-dependent dehydrogenase [Clostridium difficile R20291]
MEYNELLKSARENLNGSCKVCKVCNGVACAGEVPGMGGKGSGSSFIENSKSLEKVKVNMRVIHDVSNPDT
SIEMFGKKMSAPIFAAPVTGTTLNMGGKINERDYIEPVVAGCANSGIYAMVGDTAVDAFLMENLDVVKKY
NGAGIVFIKPWDNENIIKKIRLAEEAGAFAVGVDIDACGLVTLSLHGKPVLPKNVKQIKELVKSTKLPFI
LKGIMTVEDALMAVEAGVYAIVVSNHGGRVLDCTPGACEVLPKIADAVKGKVTILADGGVRTGLDVLKMI
GLGADAVLIGRPFVTASFGGATDGVETYVNKLQSELSSSMILTGCQTIKDIDGKVIYK
>gi|260686469|ref|YP_003217602.1| hypothetical protein CDR20291_1104 [Clostridium difficile R20291]
MSRKAYEEALVELEKFIDERKEIIKSAEDCIDKYIVDRTLPFDYKDKCVEWQQELLDIAEAQVLEANELG
VLLEEKKELEEE
>gi|260686470|ref|YP_003217603.1| putative regulatory protein [Clostridium difficile R20291]
MYKIGESVMYPKEGACYISGLVTKDINHHIQKYYELTVIYNSNLKISIPVLNADKIGVRPIMDENEVENF
IQSLDKVDCLWVFDRKKRLKLYHDKFHSGDVFEIVKLIKMLMIQDNSKQLCSTDKDFLNKAQRFALSELA
AAQCKSYTIVLEEMKNHILNSKNNN
>gi|260686471|ref|YP_003217604.1| putative ABC transporter, permease protein [Clostridium difficile R20291]
MIRLTIANIKRYIKNHALLVNMVLFPVILMFYLNFFTGNSENQSMYFSPVAIVSNSSGKYEHKLIDSSKL
KENSFGLNEQDKAMDLLKNNKVSAVFILDKNFSSNIDNLKRPEVKCFKTENGGGSLWAESQIESFITNSL
KLKIDRNIDDKLTKTNIIDNSSGKNKNSFLIVFLICYFMYINAAHLASDLFSLKKSNTLKRLVSTKHNDI
KIIFSIFLGLFFTQAIVYTLTLVCFTSISNFKLTLNTLMIVLANSFVATGFVFWIARVFKNEGSISLMST
FYSLIGLAISISNMIPSLDKLSFMANLSKLTPFYWTIDAINNNGNILINIIVLILIGMVFVTAGSLNLRD
FARN
>gi|260686472|ref|YP_003217605.1| putative ABC transporter, permease protein [Clostridium difficile R20291]
MKLYISVKTMLKVLKSSFMLNLIYFLALPLVLAGFLGMVTESIFQNPIKTDLTSIVIYDKDNTKLSSNLT
GYLKNDLSSILTVQKDDSKADLKLTIPKGYENNLLNEKSNNLSIEKLKSNDNIAILLQDILDTYHEKLYL
NNSQKLSSEDFSKLFNKNSIDTSIIKNNVKQNSYEYFALVSLGFFAIIFIMNSILSNYVSESKGLSKRLY
SIPVTRVQFLIYDFIGFWIYSFIFLSLYVLFFRTLGVTFKGNFVILALLCALASYFMTSISTFITTFFSK
KYGTVIVYALLFLQTVFGGIFSIVNDVFTKFTSLSPTYLIGTLFSNYETFKTIDSIESLIFTCLIASTVL
IALSIVKEKYKWREV
>gi|260686473|ref|YP_003217606.1| ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MDIVRVNNITKRFNDKLALDNISFSVKEGEIFGLIGPNGAGKSTLINIITNLMLPNSGDIQINGLDLSKD
CIKAKSIIGLVPQELALIETLTPFDNLEYFGTYYGLKGKLLQERITEALEVTGLTDVKKKKIKKLSGGMQ
RRLNIGIALLNHPKILILDEPTVGVDPQSRNHIFNFIKNISKKQKTTVIYTSHYMEEVEHLCSKIFIMDE
GKEIAFGDNDYLKSLVSTNTKLIMEIKNINAQLIFDLKNTKGVVSILENNSLLELGVDKKLQLTDVLSVV
DKNNSKITRISYEEPSLEDVFLNLTGKNLRD
>gi|260686474|ref|YP_003217607.1| two-component response regulator [Clostridium difficile R20291]
MIFLNKIKVLIVDDEKLIRKGLNIILSSYDDLEIVGDASNGYEALEFCKTNDVDIVLMDIRMKVCDGVLG
TRLIKEYDSSIALLILTTFNDDEYIEDAMKFGASGYLLKDSSDEVLHEGIRSSFFGNIVLDKSVAEKIMY
PQKTIEQKHISDMYNLTEKEISIIRLIANGLNNKEISQELFLSEGTIKNNITNILGKLELRDRTQLVIFA
FKNKIVI
>gi|260686475|ref|YP_003217608.1| two-component sensor histidine kinase [Clostridium difficile R20291]
MLVFIMKVYFYGGMSLMNRKKTFIFIRYLSLFILLISYLNHTENTLYPAITMIILFLIINNQVRFFSLSS
ENKFILISYFLELILIFIFCKYIKTFNPLYYVSLILDASFLIKEKYKYILFSLVIIFSFIIGLDKNLYLA
LESSSTLLIITLFSVYLENENLSKLYNQSLYDKLRVSKDELKKANADLEIYANSIEELAILKERNRISRE
IHDSVGHSLSTTIIQLNAIEKLLKDKPLISDLVHELREFVTESFQDVRRAISELKPIEYENYQNLLKIRE
LVNSFIKLTNINVRLTISKNTWNLSTNQSIALYRLVQESLSNASRHGKATEIRIFITFNPSNLIITISDN
GIGCNNIKRGNGLSSISERIYELNGKVEFDNSNTGFTIRASFPKFSGGDFFE
>gi|260686476|ref|YP_003217609.1| hypothetical protein CDR20291_1111 [Clostridium difficile R20291]
MNNKEKGDFGEEIAVNYLLSKGAKILEKNYRLRIGEVDIIANIGDEVVFVEVKSRSNIKYGYPCESVDFK
KRKKIIGVAKYYIIKNNLNNTPIRFDIIEVYLLEKRINHIMNAF
>gi|260686477|ref|YP_003217610.1| putative competence protein (putative magnesium chelatase) [Clostridium difficile R20291]
MLSIINSSNLVGIDSFLVKVEVDVSNGIPSFNIVGLPGKEIKEARERVKSAILNSGYKFPSTRIVVNLSP
ADIKKEGAFLDLSISIGLLRELIKKDENYIRESMFIGELSLDGKIRKVRGILPIIMGAKTQNIKRIFIPI
ENIKESLLVDEIDIIPIKSLKECVDFLNEEIKVDKVSIMSFLDDKSRKENGELEKDNSYIDCKYTKINNE
ESKYDEDFKDVKGNYFVKRSAEIAAAGNHNMFMIGPPGSGKTMIAKRVRTILPDISIEEMIEVSKVYSIL
GMINESKGIIDKRPFRAPHHTTTKQSLIGGGMDARPGEIALAHRGILFLDEIAEFDRKILETLRQPIEDG
YVNISRVKYSAKYPCRVLLVAAMNPCPCGYYMSETECRCRSNEIDRYINKISGPLLDRFDIFVEVNSIKY
SDFNSLKQEESSQKIKRRVENARKIQINRFKKDNIKNNSEIKAYNLFKYCKLEKEASKTAEMIFNKYNLS
SRSYTKLLKMARTIADLEERDLINSQCIIEAFSFRKAYYSYFK
>gi|260686478|ref|YP_003217611.1| putative competence protein [Clostridium difficile R20291]
MEKRDTYLWLKSIGGITTKTIEIIENEIVNIEDIFDFSEKEIYNLKNISLNIRKNIVKYRGYAYLENIKE
LLYKKAIKYICKYDKEYPENLKNIYNAPKLLFYKGDIGLVNNNFNIAIVGSRKPTAYGINCAKTISCQLS
QYGVNIVSGLAIGIDAYSHIGCMSGKSKTIAVLGSGVDNPLPKQNLHLSNKILENGGLLLSEYNINSTVA
PYHFSNRNRIISGLSDGVVVVEAAIKSGALITVDFALEHGKNVFAIPGNINSQMSRGCHKIIKEGAKLIE
NIDDILNEYNIFNIIDKKINQKYDNISLNAKSKQIIEAIKREGNLHIDSICDYTGIEIKYVNSIINELVL
NELVVEMNNKTYSLNV
>gi|260686479|ref|YP_003217612.1| DNA topoisomerase I [Clostridium difficile R20291]
MAKTLVIVESPAKAKTIEKFLGKSHYTVKASVGHVRDLPKSKLGVDIENNFEPQYINIRGKGDVIKELKK
EAKKSKQVYLATDPDREGEAISWHLAHILNLDESEDCRIEFNEITKDAIKKAIKHPRNIDINLVDAQQAR
RVLDRLLGYQISPILWQKVRKGLSAGRVQSVTTKLICDREKEIKAFIPKEYWTIDVEAKTVKDKDITLKF
YGKNDEKIELENEEAVNEILKEMEGKDLKVEKIESKSRRKSAPKPFTTSMLQQEGANKLFFTTKKTMMIA
QELYEGIDIEGEGTVGLISYIRTDSKRISDEAKEKAKGYIVNNLGENYYKNTGDKKEKKDTKKVQDAHEA
IRPTSVDRTPESIKASLSKDQYKLYNLIWRRFVASQMEDSVFDILNVECKIGDIVFKATGSKMKFDGYTK
VYNFSEREDKILPSIEKGDILNIENILPDQHFTQPPARYTEASLVKTLEELGIGRPSTYAPTIATILNRE
YVEKQGTSLCPTELGIIVTDILENNFHKFIDVDFTADMESKLDVIEEGNTDWKKIVSESYAPLKEAIEEA
LENIEKVNMDEETDEICENCGSNMVIKYGRFGKFMACKNYPDCKTTRPIMNKIGVKCPKCEEGDIILRKS
KRGKAFYGCSNYPNCDFVAWNKPTGEFCEKCGSYMVEKVTKSETKTVCSNKECNKETKEHNDGKE
>gi|260686480|ref|YP_003217613.1| GTP-sensing transcriptional pleiotropic repressor [Clostridium difficile R20291]
MASEVLQKTRKINKTLQTSGGSSVSFDLLAGALGDVLSSNVYVVSAKGKVLGLHLNDVQDSSVIEDEYTK
QKKFSDEYTQNVLKIDETLENLNGEKILEIFPEEHGRLQKYTTVVPILGSGQRLGTLVLSRYSNSFNDDD
LVIAEYSATVVGLEILRAIGEELEEEMRKKAVVQMAIGTLSYSELEAVEHIFAELDGKEGLLVASKIADR
VGITRSVIVNALRKFESAGVIESRSLGMKGTHIRILNDKLTDELKKLKNNQ
>gi|260686481|ref|YP_003217614.1| putative ATPase [Clostridium difficile R20291]
MISILKRSEKMPLADKIRPKTMNDVIGQSHIIGNGKILSKILQSNFLPNMIFFGPPGVGKTTVAEIIAER
SNKSFYKINATNSSLEDIKKVISELGSINNVNGVLLYIDEIQSFNKKQQQSILEFMENGSITLIASTTEN
PYHYVYKALLSRSTVFEFKPLEKLDIEKGLKRAVEVLNEDSYMDIECNNNAIEDIAILSDGDMRRALNIL
EVVVYSTKPNKDNITYIDSDVIRASTFNKIINYDKNGDSHYDILSAFQKSIRGSDPQASIHYLARLIKGG
DLISICRRLLVIASEDIGLAYPNAIVIVKACVDSAMQLGFPEAKIPLAEATILLATSPKSNSACIAIMKA
MDELDKEFVKDIPNSIKDAHYSGSKEIGRGCGYKYPHNFKNHYVKQQYLPDSIKDSIYYIPQENKTEKNI
KKYLEYLNSDF
>gi|260686482|ref|YP_003217615.1| putative acetyltransferase [Clostridium difficile R20291]
MIIKLNSTYHSRVMKYLKKEPEYNLFIIGDIERYGYGNNFLNIWADVGEHGEIKAILLKYFEFMMFYSDG
EYDVEGFYNLLRNTNYEEISGKICAVDTLAKRLGLNNLKVVDFCKLQTKKFLIDNNCNAKVKRIRLGNLK
KTVKLYDLIDEFHSTTLENLKNGLRTGRGYCIEINKQVVSMAKSTSENRTHAMIIGVGTHPKYRAKGLAT
KCLIKLCSELLRENKIPCLFYDNEEAGKIYKKLGFENIGKWGIYSK
>gi|260686483|ref|YP_003217616.1| RRF2-family transcriptional regulator [Clostridium difficile R20291]
MKLSTKGRYGLKAMFELALNQDNGPVSLKFIAKKQKISDQYLEQIFSSLKKSGLVKSVRGAQGGYLLSKN
AEDITVGDILVVLEGPVALSDCVLDEDVCENSNMCVTKIVWEKMKKGIEDVIDSITLKDMINDYNKNKLE
NDITNIKK
>gi|260686484|ref|YP_003217617.1| cysteine desulfurase [Clostridium difficile R20291]
MNVMEKRRLYMDYSATTPIKKEVLDAMMPYLTDYFGNASSFHTFGREAKDALDKAREQVAALINAEPSEI
YFTAGGSESDNWTLEGVAYANKNKGNHIITSKIEHHAILHTCEYLAKHHGFEITYLDVDSEGRVDLRQLE
DSIKDTTILISIMFANNEIGTIQPIKEISEIAKKHKILFHTDAVQATGNIPVDVKELGIDLMSMSSHKIY
GPKGVGALYIRKGVRLHNFVHGGAQEKSKRAGTENIPAIVGYGKAAELAKENMQNHVETLTRLRNKLIDG
VLERIPYTRVNGSLENRLPGNANFAFQFIEGEGILLLLDMLGIAGSSGSACTSGSLDPSHVLLAIGLPHE
IAHGSLRLTVGDFTTDDDIDYILENLPKVIERLRSMSPLYDDAKKQGLVK
>gi|260686485|ref|YP_003217618.1| NifU-like protein [Clostridium difficile R20291]
MQYSDKVMEHFMNPRNMGEIDNASGVGEVGNPTCGDIMKIFLDIDGDVIKDVKFKTFGCGSAIASSSMAT
EMIKGKTIKDALELTNKAVAEALDGLPPVKMHCSVLAEQAVKAALIDYAQKNNIHIPELDGYVIDDAHDH
DVEEEE
>gi|260686486|ref|YP_003217619.1| putative tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Clostridium difficile R20291]
MNKKVMIGMSGGVDSSVAAYLLKQQGYDVIGVTMKLWQDDDVVEIEGGCCSLSAVEDARRVANKIGIPFY
VLNFREVFKEKVIDYFIDEYLEGKTPNPCIACNKHIKFDDFYKKARQIGCDYVATGHYAKIEKDESTGRY
LLKKSVTDKKDQTYALYNLTQEQLEHTLLPIGDYEKDRVREIAKEMGMAVHNKPDSQEICFVKDNDYANY
VKKHSKKRIEEGFFVDTKGNILGKHKGILYYTIGQRKGLGITFGKPMFVIDINPINNTIVLGDNEDLFKK
ELIAKDVNFISIDTLEEPLRVQAKIRYSAKPSPATIHRVGEDTIKIVFDEAQRAITKGQSVVMYDGDIVV
GGGIIEKSL
>gi|260686487|ref|YP_003217620.1| putative alanyl-tRNA synthetase [Clostridium difficile R20291]
MEKMGLNEIRSKFLEFFESKGHYVANSYSLVPNNDKSLLLINSGMAPLKNYFSGVEVPPSVRMCTSQKCI
RTGDIENVGITARHATFFEMMGNFSFGDYFKRESIKWGWEFVTEWLNIPEDKIWVTVYEEDDDSYDIWAK
EMNFPEERMVRLGKDDNFWEIGTGPCGPCSEIYFDRGEEYGCDNPDCKPGCDCDRYLEFWNHVFTQFDRD
EEGNYSLLENKNIDTGMGLERMGCIMQGVDTIFEVDTIKSILEAVEKLTGVKYGENPKNDISIRIITDHI
RAVTFLVSDGVLPSNEGRGYVLRRLLRRAARHGKLLGVKELFLQKLIDEVIKVNDKAYPVLVEKESYIKK
VVGIEEEKFNETIDQGTEILNSYIEVLKNEGKTVLSGQEAFKLYDTYGFPIDLTKEILEEEHLSVDEEAF
NEEMEKQKERARNARGNMDGESWKEDPLSKLESTVDSTFNGYSEIYGEGTIEAIVKDDELVQSAEEGDKV
SIVLDNTTFYPEGGGQVGDCGLITNENLVLEVLNTKKGANNSIKHIGIIKSGRISNGDKVKTLVDRETRM
SAARNHSATHLLHKALREVLGEHVNQAGSLVTPERLRFDITHFEAISNEELKVIEEKVNNVILSSLDIKC
DIMNIKEAKEKGATALFGEKYGDEVRVVSMGDYSTELCGGTHLTNTSQVGMFKILSEGGVAAGVRRIEAI
TGKAVYEYLKERDGIISEVCVNLKSKEDNLIQRISSLLEENKNLSKELHDMKAKMSLQSVDSIFDSKVEV
NGVNLITNKFEGMDMDTLRETADNLRDKLGSGVVVLANVVDDKVNFVVTATKDVLDKGIHSGNIVREVAK
IAGGKGGGRPNMAQAGASDVSKVDQALSYASEVIKTQVK
>gi|260686488|ref|YP_003217621.1| hypothetical protein CDR20291_1123 [Clostridium difficile R20291]
MEKDLDYTMKFEGIPEDRMSVGDTIDFVYKALVEKGYNPINQIIGYLLSGDSSYITSHKNARAIIKKFER
DEILEEVITHYLNRK
>gi|260686489|ref|YP_003217622.1| hypothetical protein CDR20291_1124 [Clostridium difficile R20291]
MRKKIMSLFAIVIMIFVSTASYGFAEEKGKVIFIDMNRTNLGSMMNIPILKNEIEKRGYVALMNIRGDQG
TDDRRSYASMGAGTRASVTTEDYINFQKVDQDTAKAFEVATGQKAKEINDLGINRSINENLEYGEYGANL
GSLGKTLSENGLKTSVIGNADIIENNQLVKNRNLCLVAMDQYGRIDSGNIDNINKKDSKMPFGISTDYDK
LLDETKKSYKNSDAIFVELGDTYRLDMYRLNLNDNTYGTMKKNIVKNINKYLEQVFSMVGENDTVYIASA
FPSDLDYKNKRRLSPIIKFSGEGKGLLESATTRKAGIVANLDVGVDILGTFGLENKEMVGRSYTLVNKED
NVGYLKSLYERIVSISSIRSTIINGFVGVISASWVIAMFAIFFRNYMPHKERVFKVLKEFIKLGIIMPLS
FMLAPLMNFKTPISISLGIFATTLILYLLGRKLFKDNDIKHMGFFATLTILVIVIDSVFGTYLMQNNIMS
YDAVIGARYYGVGNEYEGVTIASAVFGLAVLLHYKKVSKLLVVIFSLIILITSAYPSMGANVGGAISECV
AYLLFIMLIYDIKIDFKKAVLLAVSAVVVVFAFAALDILSGSESHLGMFVQRIFLNGPGEILQTFGRKIQ
MNMQLAQTSVWVNILLVGIGVIAVLIFKPSRHFRKIMNNFPILFKGFIASMVGCIITLLVNDSGIVAAST
ASIYILIPLIIININMIIFEKNN
>gi|260686490|ref|YP_003217623.1| putative holliday junction resolvase [Clostridium difficile R20291]
MLDGRIMGLDVGDKTIGVAVSDLMGLTAQGVKTIKRVGKKKDIEELKAIIKEKQVNKIVSGLPKNMNGTL
GPQGEKVIKFCELVKAETGIDVEFWDERLSTVAAERSLLEADVSRQKRKKVIDMLAAVIILQGYLDFKIN
S
>gi|260686491|ref|YP_003217624.1| hypothetical protein CDR20291_1126 [Clostridium difficile R20291]
MEENIINLIDENGVESQFEIILTLEAEGKEYAILMPLDDEEAEEALIFRIDEDEEGEILIPLESDEEYET
VVAVYTAIMEEEGLNYDEDESNGLN
>gi|260686492|ref|YP_003217625.1| ferric uptake regulation protein [Clostridium difficile R20291]
MANTMDLLKDKLKETGFKITPQRRAIVEILLKHDHSHLSSEEIYDLVRVDCPEIGLATVYRTMQLLDEIG
LISKLNLDDGCIRYEISLHKEDCHNHHHLICKNCGKIMEAKEDLLDNIEKEIQSLYKFKILDHDVKFYGL
CDECNGVSDSEE
>gi|260686493|ref|YP_003217626.1| putative membrane-bound metal-dependent hydrolase [Clostridium difficile R20291]
MRGKTHCAIGILTAIQTSLIFKIPISLVDILVSATFAVLPDLDKSNSMVSNFILKNNVSKYIYRIFIYAV
NIIIFFISININDNFYLSAIITFVAIIIIEAKLTHTFLRKVFLSLIFILLAICLYIIEVEIYFTIFCLML
SIFPWLKHRSFSHSIFATIIVYFLLKQIELITNINNLSFYGTIGYASHMFLGDLFTKQGIPIFYPLSEKK
ISLGFLTVGGPFSNFIEKSFIFVLIGLIIFSILKL
>gi|260686494|ref|YP_003217627.1| metallo beta-lactamase superfamily protein [Clostridium difficile R20291]
MIVERVKKLNRQKEMMQLFKKNTNKIKVMALGGLNEVGKNMTVVEYKDEIIVIDAGLSFPEDEMLGVDIV
IPDITYLVKNRDKIKGIFITHGHEDHIGALPYILKKINVPVYGARLSIGLIQVKLKEHKMNNVKLNVIGP
RQVIKLDNMEVEFLKNNHSIPDAYSIAIHTDQGIIYHTGDFKIDLTPIDGDVMDMHRICELSKKGVLLML
ADSTNAEKPGFTMSEKTVGVGLDELFAKGNGRRIIVATFASNIHRLQQIINTAEKFNRKVAISGRSMVNV
VGVAKELGYLDISDDMLIDLNDICKYEDSELVIITTGSQGEPMSALARMAFSEHKKVEIKSGDLVIISAH
PIPGNEKLISRVINFLFEKGAEVVYSDIADIHVSGHACQEELKLIHALVRPKFFMPAHGEYRMLKRHAEI
AEQLGMDKENIFVMQTGDVLELDKNSAKVANRIQTGNILVDGLGVGDVGNIVLRDRKHLSEDGLMIVVVT
ISKDEGKVLAGPDIISRGFVYVRESEDLMDGAKDIIKNVLNECEEKNIKEWAYLKNNIKENLKEYLYQKT
KRNPMILPIIMEV
>gi|260686495|ref|YP_003217628.1| putative small acid-soluble spore protein [Clostridium difficile R20291]
MDDVSRQNAIKALKQTKMEIAGEYGMNYEDAFEIIENASNKGVLEGYFKKLEKKKNLGQGISRHLE
>gi|260686496|ref|YP_003217629.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein) [Clostridium difficile R20291]
MKKLASTALAILIALTPLSFSFANNKENADANQLNISSKSAILMDVGSGQILYEKDAHKKLPPASVTKVM
TMLLIVEALDSGKIKLDDEVQVSETASSMGGSQIFLEPGETQKVDTLLKGIAVASANDACVAMAEHLAGS
VEGFVDRMNAKAKELNMNDTHFANTNGLPVANHYTSAHDIALMSRELLKHEMISKYLTTWMDKVVVGKKQ
VTVGLANTNKLIKHYQGATGVKTGFTQEAKYCLSASAKRGNTHLVAATLGAETSPERFNDASSLLNYGFA
NYESVKLCSKGDNIATLTLDKADENKVKLVAKEDLNALIKKGSSKEFEKKIEIVKNPKMPIKKGTVLGKI
KICKDKKVIGEVELINTKDINKASYLQMLQRIIDNMI
>gi|260686497|ref|YP_003217630.1| hypothetical protein CDR20291_1132 [Clostridium difficile R20291]
MENKNSKCVMVIDENLPMGIISNTAAIMGITLGKHAPETVGPDVIDKTGNSHLGIIDIPVPILKGNKEII
KDLRKKLYTLEFNDLTVVDFSDVAQSCNLYEEFTQKIASVPEDELQYFGIAIYGNKKKVNKLTGSMPLLR
>gi|260686498|ref|YP_003217631.1| AraC-family transcriptional regulator [Clostridium difficile R20291]
MRQEERTVCFDRELKIEAYRFKGIMQKFPNHFHEHYVIGFIEKGQRYLSCKNKEYTTSTGDLLLFNPFDS
HTCEQIDDKVLDYRCINIKPEIMKKTVFEITGKNYLPKFNQPVIFRSELVPLLQELHYIIMEEELDFKKE
ELFFFLIEQLIEEHTEPNLQSNLENTNIEIQAVCDYLENNYAEHIVLDELSTIAGMNKYSLLRNFTKLKG
ITPYRYLENIRVNKAKKLLEKGVEPIDAAIQTGFVDQSHFTNFFKNFIGLTPKQYQNIFINDDSNNFK
>gi|260686499|ref|YP_003217632.1| putative membrane-associated peptidase [Clostridium difficile R20291]
MLSMNIGEIVASLVGIAMAISIHEFGHAYSAHLLGDDTAKAYGRMTLNPVRHVDPIGLLAMFILKIGWAK
PVPVNPNNFKNYKIGNLIVSLAGVFCNVLTAILCVIINKYVHMYAINTIAGYVLIYSMGFAAFNLLPIPP
LDGWGVISTFVPYKWNEYLYKFESMSYIILLIALFTGIYQIILSPIYTVLLKIVYLFV
>gi|260686500|ref|YP_003217633.1| segregation and condensation protein A [Clostridium difficile R20291]
MKYNIQLQVYEGPLDLLYDLITKHKIDIKDISIIDITKQYLNYLKMLDKMDLEITSEFITMASKLLEIKS
KYLLYKQKDEEEDPRIELMEKLEEYRKFKVASQDIKENITYVNERFYRNKEEIIIDDNVDLEDISIEAIK
NILPYIFKVKTSQIENANDEKLDKIVRKKIISVEEKILYIRDIIKDKIEVTFTNIIKSYENDEIIATFLS
ILELIKEKEIVVVQDIFFDDILIRKSSEC
>gi|260686501|ref|YP_003217634.1| segregation and condensation protein B [Clostridium difficile R20291]
MKREDIKYIIESVMFAYGEPISIKELNYIINKELSSKEIEIMLNLLIEEYREQNRGIQIIKLENKYQMCT
NKDYAEYIKKIIEPKKKKSLSQATLETLTIIAYKQPITKVEIEDIRGVKCDKVLQTLFENELIREAGRLN
KIGKPIIYKTTDEFLKLLNIESLEELPPIENYQEVATNE
>gi|260686502|ref|YP_003217635.1| hypothetical protein CDR20291_1137 [Clostridium difficile R20291]
MELNELFNFKYLIIAVIFIISVTMLILISHINILIIADINNKDICLKLNIKYMFNLININRQLYPAENSK
NNDKKEGMKNNIDSSILLADDLLSIYRLLKKIKIHELYSNINFGTGNIGLTSSVYVLINTLYGNLFNMID
AEKMYLNVNPDFTKDYVLGNIRIHIRPRIKALFNIIIMINKIMNKNKGNKEGDSNESNRFDTKSYGNNS
>gi|260686503|ref|YP_003217636.1| hypothetical protein CDR20291_1138 [Clostridium difficile R20291]
METTLETIKGSIDANTIIGDPIKTDTTVVVPISKVTIGFGIGGGEYSKGYDDKDREIELKNEKSDTNFAG
GSAGAISVQPVAFVVVESGETRIMSLDSNINLVDNILSITPRVLEKIQNISQSNKNQDKNNM
>gi|260686504|ref|YP_003217637.1| MarR-family transcriptional regulator [Clostridium difficile R20291]
MSDKELSILLLESMNNFHNLIKIINNERYKKDKVLTERQFFALVKIRKHDKIELKNLSRDLHVSTSSLCI
LLNKLVEQEYVYREEDSRDRRNTFYGITKNGEKILDNEILKFVSIISDKMDCLDIDNKDKLFTSLEESKN
IIEQLF
>gi|260686505|ref|YP_003217638.1| putative cytosol aminopeptidase [Clostridium difficile R20291]
MNIKYSKEILKSLENAITVVALFEGEDVSTTFDKINMISRNFNSKENSIDTVTLVENNNLVNVCLVGFGK
RELLNREKIRIIGGNLCKKLKNILKNEAYKSSDVNVLNLNLNSDEIGSFVEGILLGNYKFDKYKTKSKDF
ERKEVDTITIFTEKEVECQIEKAKILANSTIIARNLVNEPSNVIYPKTLAIETVKLGAEFGFNVDVYEEE
KIKALGMDAFFAVSRGSINKPRFIVMRYFGDKESTDILGLVGKGLTYDTGGYSLKSNASMLDMKTDMAGA
ASVIGAMCAISQSKLKKNVIAVVAACENALSGGSYKPGDIISSMAKKTIEVLNTDAEGRLTLADAIYYII
NNEKVTKVVDVATLTGAALTLLGNVATPIVTNNDDFYCELEKAATLSGERVWKMPIYDEFKDMIKGEEAD
LKNTGGKNAGCITAGAFIGEFVGNTPWIHMDIAGTSTSSKSIGYKAKGATGEPVRTLYYLAEI
>gi|260686506|ref|YP_003217639.1| hypothetical protein CDR20291_1141 [Clostridium difficile R20291]
MFKIFLFSSEQFVSLFIFGLFLYYCPKLTKNILPYSYTVEKIICTLLVIIMALEQLLLISSGNYSTLNSL
PIGINYICIYLCIAILIFKQYHLFNIFFSWSLVCSVGELIFSKNLGYEFPSLIYFIFIFSKCLIIYADIY
MVDVRKFRVNRYALRDNLAICFIYFSFIFLLNTFTNSQYYYGFLSHSTTAIFTFIFVTSIMYIPALLFNR
DTFILEKKKKSK
>gi|260686507|ref|YP_003217640.1| hypothetical protein CDR20291_1142 [Clostridium difficile R20291]
MGIIESASKLAEMVHLLAVEKGITDIEAWDEAVKEYSKIYEERRNE
>gi|260686508|ref|YP_003217641.1| putative pyrophosphohydrolase [Clostridium difficile R20291]
MKLKTISLPELNNLDPTLESTFIKMGEEQGELAECIGKFRNLSGENNDLDEVDIIKKTAKELMDVAQTCV
TMMFKLEEQYGINLDEIRKEHIKKLEKRGYIKNMDK
>gi|260686509|ref|YP_003217642.1| putative NAD-dependent deacetylase (Sir2-family regulatory) [Clostridium difficile R20291]
MDANSLKDLIANHNNIVFFGGAGVSTESNIPDFRSSTGLFSQKLNKQFTAEQLVSHTFFVRYPEEFFEFY
KDKLIYPNAKPNNAHIALAKLEEMGKLKAVITQNIDGLHQMAGSKNVLELHGSVHRNYCTKCGKFFDLES
MLNLGGNIPYCDNCGSIVKPDVVLYEEALDSDVITKTISAISNADLLIIGGTSLAVYPAASFIDYYKGDY
IALINKANTVYDKSASLVINKPIGEVLYEAVLRQI
>gi|260686510|ref|YP_003217643.1| putative mannosyl-glycoprotein endo-beta-N-acetylglucosamidase [Clostridium difficile R20291]
MKKKAALATLAMLPLGVVNAHADGDIGIVTINYLNVRNEPTAESSIAFVAKKDDKVLIKDSSNGWYKIKA
ESGQEGWASSKYIAKSNSDSLRTSTNKEKQVISNSLNMRNGAGTSYRVITVLKKGQKVEVISESNGWSKI
KYDGRLGYVSSSYLGDVSNSTNKSKTKQVNTTSLNVRSGPNTSYGLLGKLPKGSKVEVISESNGWSKIKY
NGKDAYISSMYLSDVSQSNSDNSSQSNDKKNTDKVVNTASLNVRSGPGSTYSKLGKVYKGSKVTVLSESS
GWAKINFNNKEAFVVGNYLSTSADTSNNNSNSNSDNSSNSNGNNSSSSGQVNGMSGISGAKIDYKSLSYT
LESHISKQVEKAASGGNVIAPSNRKSTPSPEFSTFSAQRTSSFVNASSSDIEYYLNPKNFTNTTKGMMQF
LKINSYRDGISESSLNSYLNGLSSSVFKNQGAAFINAAKKYNIDVVYLVSHAMWETAYGKSTLAQGQTLT
SYKGQPLSKPVKVYNFFGIGAIDKSANVSGAEAAYSNGWTSVEATIDGSAKWISQNYVNSSKYNQNTIYK
MKWNYDYTWHQYATDVNWANGISGIMENLIGLYGGGSSLVFEVPQYK
>gi|260686511|ref|YP_003217644.1| DNA polymerase III PolC-type [Clostridium difficile R20291]
MESIKEYLDKLEINNSGLGKQLKEVYINRVVYFKEDKIVYFYLTSKDIVSHELLDKFKEELMYKLDYFKD
MRMKIRFTGLERKSNKDVIKKYWNNILYILKYLCPSIAGWYKQVEFLCLEEELKIKLPKGIFYERLMKKN
VTYVLKTVLSEELGLDLNITIEKAVDEKVNKERLIRINDREMEEKIRALEIGKVNNCEENEEESYVIKSD
VDENLIYGDNANAMIENIVELNASSGTVAVVGDIFDVDTKELKNGKILMIASITDYTSSISCKLFLTDTN
KDGVLENVKKGAYLKIKGDIVYDTYQREISMMISGIRKETRIEREDKSEEKRVELHAHTQMSSMDAICSV
KKLVERAAKWGHSAIAITDHGVVQGFPDAMNAGKSNNIKILYGVEGYLVEDDSLIIEDANDKELSQTFVV
FDIETTGFSNTNDKITEIGAVKIENFKIVDRFSELINPEKDISYKIQELTGITNELIKDKPTIEEILPKF
MEFVGDSVLVAHNAEFDTGFISQKCREQGLLYNNKKVDTLMLARVMLPNLKRHRLNVVAKELGIPLLNHH
RAVDDAEATALIFNKFLQMLTEKGAKTLSDVNNILGKIDYTKLSTNHITLIAKNSIGIKNLYKIISDAHV
NHFFRAPRILRSVLNEYKEGLIIGSACEAGVVFQAVKKNVSDEEMKKIIDLYDYIEVMPIDNNRFMIDKG
EVKDEEELRELNRKLIDTAKKFDKIPVATGDVHFLDKHEAVLRKVLKYSQGFKVDEEETYLHFRTTDEML
EEFSYLGEELAYEVVVENSNLIADMVEDIKPIPDDTYPPIIEGSDVELREMCYKKAKRIYGDPIPEIVQK
RLDRELNSIISNGYAVMYIIAQKLVAKSLSDGYLVGSRGSVGSSFAATMSDITEVNPLPAHYICENEDCK
YSFFYEIGEWGSGVDLPDKDCPKCGRKLAKNGHDIPFEVFLGFEGDKEPDIDLNFSGNYQPTIHKYTEEL
FGEGYVYRAGTIGTVAEKTAFGYARKYVEENNISVPNAEVLRLSNGCTGVKRTSGQHPGGVMVIPDYKDV
YDFTPIQYPANDTSCGVITTHFDYHSISGRILKLDILGHDGPTIIRMLEDMTGINITEIPLDDKETMSLF
TSTEALGVTPEEINCPIGCLAVPEFGTKFVRQMLLDTKPTTFAELVRISGLSHGTDVWVNNAQDLVREDI
VGLKDVISTRDDIMNYLIFKGLPPKMSFTIMESVRKGKGLKPEHIEEMKKNNVPEWYIGSCKKIKYMFPK
AHAVAYVMTSFRIAYCKVHYPEAFYATYFTTKVEDFDADLIVKGLDAIKSKINEIESLGNDATTKEKGML
TVLEVALEMYARGIKLLPVDIYKSDATEFIVVGEKTLLPPMAAIQGLGGNAAINIQNERKNGEFISKEDL
RKRTKISKTVIETLTNHGSLENMSERNQLSLF
>gi|260686512|ref|YP_003217645.1| hypothetical protein CDR20291_1147 [Clostridium difficile R20291]
MKKNLEATIEEIVTKITDEHGFEMVDVEYVKEAGEYYLRVYIDKEEGISLNECELVSRELSPILDEKDPI
KENYFLEVSSPGLDRALKKDRDFVRYQGRDVDLKLYKPLNGCKQFEGELVGLTEDNNIKIIANGKEMEFN
RKDVAIVRLAIKF
>gi|260686513|ref|YP_003217646.1| transcription elongation protein [Clostridium difficile R20291]
MNHEFMEALDELVVDRGIDKEILIDTIEQALLTAYKKNFGSAQNVRVEFDRDKGDIKVFSQRVVVDESDL
YDTFLEIELADAREINPNYELGDIIEHEVTPKNFGRIAAQTAKQVVVQRIREAEREIVYNEFIEKENEIV
TGEVARANKNVVYVNLGRIEGIMTQSEQIPFENYKAGQKIKFYILEVKKTNKGPQIVVSRSHPGLVKRLF
EEEVPEIYEGIVQIKSVAREAGSRTKMAVKSIDEKIDPIGACVGPKGLRVKNIVDELGDEKIDIIKYSED
PAEFISAALSPSKVVRVDIDEDEKSALVIVPDYQLSLAIGKEGQNARLAAKLTNWKIDIKSESQAEQEML
NLENSKEIEAEDVEAEFIDQEELGTSEDNFSEEE
>gi|260686514|ref|YP_003217647.1| hypothetical protein CDR20291_1149 [Clostridium difficile R20291]
MILKKVKKVPQRKCIACQDRDSKKELIRIVKNKEGKIFLDPTGRANGRGAYVCKSSECLKKAIKSKALNK
AFKIDVPDEVYDNLLMELEEYEK
>gi|260686515|ref|YP_003217648.1| putative ribosomal protein [Clostridium difficile R20291]
MKNNKEKVLSFLGLATRAGKIVSGDDSTLLDLKKGKVNLILIAEDASNNTKKLFKDKSTFRNIPYLFFST
KEEIGFAIGKSPRAVVGIKDENFSKKIIELIEI
>gi|260686516|ref|YP_003217649.1| translation initiation factor IF-2 [Clostridium difficile R20291]
MSKTRVYQIAEELNISNEELINKLAELDINVTDKDSVLEGEELELALEMLGEDLSQENGNVIEIDGKLTV
QVLATKLDKSPSEIIMKLMKMGTMATINQEISFEIAALAAKDYGFELTVAESDDTEALEIEALMEIEEDK
EEDLKPRPPVVTVMGHVDHGKTSLLDAIRKTDVISGEAGGITQHIGASEVKINGHKIVFLDTPGHEAFTS
MRARGAQVTDIAILVVAADDGIMPQTVEAINHAKAAGVPLIVAINKIDKPGANPDKVKQELADQGLLVED
WGGEVIAVPVSAKKKEGIDTLLEMVLLVAEMEELRANPNKRAVGTVIEAELDKGRGPVATVLVQGGTLTV
GDPIVAGVACGKVRAMINAKGKRVKTAGPSTAVEILGLSEVPQGGDQFVEVPTDKIARSVAARRQQIVRD
EMLKSTQRLSLDALFSQMSEGSIKDLNIVIKADVQGSVQAVKQSLEKLSNEEVQVKVIHGGVGAVTESDI
LLAAASNAIIIGFNVRPVPGAESLGEKENVDIRTYTIIYKAIEDIQAAMTGMLDPEYVDEETGKAEIREI
YKISGVGTVAGCYVTNGKIFRNCKVRLVRDSIIIHEGELAALKRFKDDVKEVNSGYECGMSFVNYNDIKE
GDIVEAYITKEVERKL
>gi|260686517|ref|YP_003217650.1| ribosome-binding factor A [Clostridium difficile R20291]
MASYNRTRRIAEEIRKVVSTMLINGVKDPRITSMVSVTDVEVTNDLRYAYVYVSILGGDEESTLTGLKSA
GGYIRREVGKNIKLRYIPEIVFKLDDSIEKGMYMDNLIKRVNEKNAQQNEDENYDE
>gi|260686518|ref|YP_003217651.1| putative RNA-binding protein [Clostridium difficile R20291]
MKKMLNKMRMKIMMNNMDSIINYIYEGDYFIVTSHISPDGDNVGSTLSMYYTLKNLGKNVYYVLDDEAPL
NLRFLVEGVKIYKSNEFNMKNYSLIALDCGDKMRICVSDEIKNNASKLICIDHHASNDSYGDLNYVDIDA
SSTCELVYNLLVRFQQTKDINIINEDIATCLYTGLVTDTGNFSYSNVHASSFEMAKNLLVLGAQKNTIIQ
NIYQSNSSDYYKLLGEALKGLEIFDSKVSSIVLTQDMMNRNNISFNDVDGITTYTRDIKGIEVGILFKEK
KQNEIKVSFRSKNYVDVSEIAKLFGGGGHVRAAGCTIRDSIDNAKKMVLEAVLKSI
>gi|260686519|ref|YP_003217652.1| tRNA pseudouridine synthase B [Clostridium difficile R20291]
MNKIISILKPTGMTSHDVVSRVRKILNIKKVGHTGTLDPDASGVLPICIGKATKVCEVILNKDKSYICEL
TLGISTDTYDASGEILKKVDDFKFSNEDIERAFDTQRGEINQLPPIYSALKVNGKRMCDLVRSGRQSEIT
LKTRRVNIKDIKILSIKGNKVMFYVECSKGTYVRSICHDIGEYLGCGAHMSFLNRTSSGKFDLDNSITLE
ELELFYENKTLDKYLYDIDYVLDSFNYVVLNPNAIKYYSNGGSIDDKRFLKNNFDKDDEVVRVYSTDNFL
GLGKLSKHNNTISVKSDKMFI
>gi|260686520|ref|YP_003217653.1| riboflavin biosynthesis protein [Clostridium difficile R20291]
MVIIKSIKEIANIKESVITIGNFDGVHKGHQVLIGKTVEYAKKENIQSIVFTFANHPVNYFRPNSTKNII
SNDDKIKLLEDLGIDIVVIIPFDEYMTKIPAKDFVDEILVKKLKAKKIVIGHDFTFARAKEGNVNLLKSL
EHEFGFEVEVIKPIKINDVRVSSTYIRSLVSQGDMANVKEYLGRNYKLEGCVIHSKHLGRTIGFPTANID
LKNNMLVPKRGIYASIVHIGDETYFGATNVGYNPTVNGKTLSIETNILEFDRDIYGENIIVEFLERIRDE
RKFNSIDDLKNQLYNDTNYVYENYVCKNK
>gi|260686521|ref|YP_003217654.1| hypothetical protein CDR20291_1156 [Clostridium difficile R20291]
MYDKMIKENNHYSAFEYSNQCLVIGVSKKIRR
>gi|260686522|ref|YP_003217655.1| 30S ribosomal protein S15 [Clostridium difficile R20291]
MINKSEIIKEYGRAEGDTGSPEVQIALLTARINELNGHLKTHKKDHHSRRGLLKMVGRRRNLLAYLKEKD
LEGYRALIAKLGLRK
>gi|260686523|ref|YP_003217656.1| hypothetical protein CDR20291_1158 [Clostridium difficile R20291]
MKIKLVCDSLCDIPDEISEKDYIEIVPLTVIFNDREYIEGVDIKKEEFYKKVKEIKQIPKTSQATYMEFK
EVFDKFITEGYHIICMTGAANASGTFQSAMIAKNDVNENEKIHIFDTRNLSLGSGQYVIKACELLEEGLG
FEEIIDELENTRSSVRLLFAPYTLDFLKQSGRVPVATALIGNMLNIKPIFFFDNGEAKLVNKVRGIKNIA
SKLVDIILEMNEGSLEGKIVTIGCGDNLHDCEILKDEVNKRIKARRVLFTRGGVSICSHTGPDILAISCS
N
>gi|260686524|ref|YP_003217657.1| polyribonucleotide nucleotidyltransferase [Clostridium difficile R20291]
MFEHKIFKMDFAGRELSVEIGKICEMASGSCIVRYSDSMVMVNTTKSAKPRDGIDFFPLSVDYEEKLYSV
GKIPGGFLKREGKPSEKAILTSRLIDRPIRPLFPKGFRNDVQVVATVLSVDQDCTPDIVAMIGSSIALSI
SDIPFNGPTGSVCVGLVDGAFVVNPNAEQREKSSMHLVVSGTKEAIMMVEAGADEVPDEVMLDAILFAHQ
EIKKIVEFIEGIVAEVGKEKMPVELYHAGEEITQLVREFATDKMKKAVQTFEKLERMENMDRVKEETLAH
FEETLEDFEDFVGDIEEVLQDIIKEEVRKLIVHENVRPDNRKLEEIRPIWCETGMIPRAHGSAIFTRGQT
QVLNVATLGALGDVQKLDGLDEEENKRYMHHYNFPAYSVGEARPSRGPGRREIGHGALAERALLPVIPSQ
EEFPYAIRLVSEVLSSNGSTSQASVCGSTLSLLDAGVPIKDMVAGIAMGLIKHDGKVAVLSDIQGMEDHL
GDMDFKVAGTEYGITAIQMDIKIDGIDKEILQRALKQAKEGRIHILGEMRKTISQPKPELSPYAPKIVKM
QINPDKIKDVIGPGGKIITKIIDETGVKIDIEQTGEVFISGIEIDMIKKAQELINNIVVEPEVGKTYKGK
VSRIMNFGAFVEILPGKEGLLHISHIAHERVAKVEDVLNIGDEVEVKVTEIDEKGRVNLSRKVLLPKPEH
KNK
>gi|260686525|ref|YP_003217658.1| putative polysaccharide deacetylase [Clostridium difficile R20291]
MIMMVLNKSKLKKIIILILVVLLVLSGGVMVLKLFNNKPVFNLFNGVDLPYERGTKDKSGYVALTCNIDL
GWETEYVESILETLKKENVKITFNVTGKWAEKNKDELLKIKKQGHEIGNHGYKHLDYSTLSYEDNYEQIE
TSKKIIEEIIGEKTKFFQAPAGSFGPETVKAAKALGYTSIKWDADTIDWKYKDQPEVIIDRMKKKDIKDS
SIILMHPTNATTKCIDDIIAIVREKGLKPGKLSDVFK
>gi|260686526|ref|YP_003217659.1| putative peptidase [Clostridium difficile R20291]
MYKTKILENGLTIIGEEIPYLKSITLGIWINAGSRIEEAQVSGTSHFIEHMMFKGTKNRTSKEIASSIDN
LGGQINAFTSKECTCYYVKLIDEHIDTGIDVLSDMILNSKFDKNDIDKERLIILEELKMYEDSPDDLSYD
LLVENIYANDGLGMNIIGTKESLYNITRESMLEYLNKYYIPNNAVISIAGNFNFDDMVEKIKSKFGHWEK
KNLSIDISEAKFNPCFISKNKDTEQVNLAICLKGIPFENDEEVYSMAVVNNIFGGSISSRLFQKIREEKG
LVYSIYSSQTLYRKCGELGIFASMSTENLQDVYNLIKKEIENIRENYLTEKEISESKEQLKGNYILDLES
TSSRMMSTGKSMLLSKKVKTTDEILECINNVNINSIKKVVDKVFNIENIGTCIVGRDVEKILHLD
>gi|260686527|ref|YP_003217660.1| hypothetical protein CDR20291_1162 [Clostridium difficile R20291]
MNLSEIAGKEIVNLVTGERLGVIGECDLILDETTGGILALLIPKEKGFFARRKDKSFLEVPWRNVKKIGN
DMIIIEYEGYI
>gi|260686528|ref|YP_003217661.1| aspartokinase [Clostridium difficile R20291]
MSILVQKFGGTSVESYEKMNEVCKIVKAYKKNDEELQLVLVVSAMGRKGAPYATDTLINLCSAVNDEPSK
RELDLIMSCGEIISGTILANLLNAQGIDSVFFTGQQAGIITSDEYSNAKIKYINPKKVKRALDDGKVVVI
AGFQGVTDDGEITTLGRGGSDTSAVAIGKALECETVEIYTDVDGIMTADPRVEPNAKVLSFIDYEEVFQM
ADKGAKVIHPRAVQLAKSGNITLAIKNTMNPTFEGTKIGSLCRHLEENIEYEQERDFKVAVANKDSVAQV
KIKSAEEVFTEVLNEIEKKLITIDMINFFISEKAFVVEDADIKSLKEILDKFELDYEVNRDCAKVTLICS
RIADEMSGIMSKVVRGLSKAGVSLLQTSDSNMTISCLVSEEDMHTAVHAIHQQFYLK
>gi|260686529|ref|YP_003217662.1| translocation-enhancing protein TepA [Clostridium difficile R20291]
MKDYREDNERFDKDNCSEESSCEERECIKQFGTNEMPPQPPKDIQCITIIGEIEGHFIGNPQKKATKYEH
IIPMLYSIEESNDVKGVLVVLNTVGGDIEAGLAIAELLNSTSKKVVTLVLGGSHSIGVPLATAGDYSFIA
PTATMIIHPVRTTGLVIGINETFEYFKKMQDRIIQFIIRTSNIKKDVLEKLMHEKDELVSDVGSVLIGKE
AVDYGLIDEVGGLKEALKKLRELIKESEEEKNND
>gi|260686530|ref|YP_003217663.1| putative DNA translocase [Clostridium difficile R20291]
MATKKKKKKKVNTLSFNAEYHNLITIFIGVFLLYSLNSNSMGWIPVLMQNLFKGLFGGLSIAIPFIVIIT
GLLGFFDGNEYIYRLRKTKLYYIIILFIFVFYGLLNAGTLPVDSPLKGNMFDDVMKLGVSGQGSGLIATT
IAYYMSKIFGIAGGWLISIFALILSVMFIFNISIKDLVSNAKSKSKASKDSNLTFKDKIANMKKSAIDMM
TDEVDDTTINKKPGFFKGLMSKGLNNDDEEDEYFEEENSDGVDDKTIKIVGFNKAEDEYLEILEGTQSMP
ELDVLKELQKATNENPVVDTKPEKKVDIAKSNLNIEKTQPMSIVAEPVNEDYSNYKKPSIELLNKVNKKS
DENGKKKVLKNASLLEKTLSDFGVEAKINQVTVGPTITRYEIQPSPGVKVSKIVNLTDDIALSLAAKSIR
IEAPIPGKSAIGIEVPNEEAQMVGVREVLESEEFNNFNSPLAMGLGKDVAGKIIIGDIGKMPHLLIAGST
GSGKSVCVNTLISSILYKANPDEVKLLLIDPKVVELANYNGIPHLLIPVVTDPKKAANALNWAVTEMNRR
YKLFADAQVKDVTSYNEKAEEKLPKIVIIIDELADLMMASANDVEDYICRLAQMARAAGMHLIVATQRPS
VDVITGVIKANIPSRIAFAVSSQTDSRTILDMGGAEKLLGKGDMLFYPLGAAKPVRLQGAFISESESEKV
IDFVKSQVKDGIKYEEDIIETISKVNTSKSSDEDEFLSEAIEFVVESGQASASMLQRRFKIGFNRAARLI
DSMEERGIIGASEGSKPRKVLISKQDLQNLEGE
>gi|260686531|ref|YP_003217664.1| putative ATP/GTP binding protein [Clostridium difficile R20291]
MSVIKIEKALKLDKVIFVDVRTEGEYEEDHILNAINMPLFKNNEHNEVGTIYKMQGKHEAIQKGFDYVSY
KLKDIYLQAAELALNYDNIVIYCARGGMRSGSIVNLLSSLGVNVYQLEGGYKAYRNFVLEYLRHVMDTKN
FVSVHGLTGTGKTDLLHLLDEKGIDVLDLEGIAKNSGSTFGFITFDKKPPSQKNFETKLFESVFFSKENY
IFVESESKRVGSVTVPNEIFEAMTREGHHILLECDIENRVDRLCRDYIYDKDEGNILILKECINKFRKRL
GNKVVDDYIDLLESGEYKELVKRYLLEYYDPLYMHSVEKYKYSKIINFNDTQKALEDVIDLYESILEGES
EC
>gi|260686532|ref|YP_003217665.1| radical SAM-superfamily protein [Clostridium difficile R20291]
MLKIALESLGCSKNLVDAEIMMGILNNKGYKLIGDFEEADVIIVNTCGFIESAKQESIDTIINFSELKKT
GNLKLLIVTGCLAQRYSEELKTEIPEIDAIVGTGSYQNIDKILKELSEMHQIVSLNDIEFVFNEDLPRYI
STPSYMAYLKIGEGCSNNCTYCIIPKLRGKYRSRKFEDIIKEAKKLAESGVKELVVIAQDTTKYGFDLYG
KERLSELLEELAKIDGFKWIRVMYSYPESITEELIQVIKKYDNICSYFDMPIQHASNNILKLMNRKTTKE
DILNKINLIRSNIPDAILRTTIIVGFPGETEDDFKQLVDFVEEVKFDRLGAFAYSREEDTPADRLPNHID
EEVKIQRRDTLMMIQQKISEELNDKKIGKTYEVLIEEQIEDNVYTGRTQGDAEEIDSIVYVKSVDNLEVG
EFVSVQINDAMEYDLMGDVLYELA
>gi|260686533|ref|YP_003217666.1| CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [Clostridium difficile R20291]
MFYMNLPNKLTLFRIFLIPVFVLIMLLNVPNKFLIACIIFIIASITDALDGKIARKYNLVTDFGKFMDPL
ADKLLVISALTCMIEDHLVSSWMVIIIVARELTVSILRAIAAADGKVIAAGNSGKLKTITQMVSIVFLLL
GAQFENVLILNIGEILILIATLLTLYSGWEYLYKNKELFMSSK
>gi|260686534|ref|YP_003217667.1| RecA protein (recombinase A) [Clostridium difficile R20291]
MSVDQEKLKALNEALGKIEKDFGKGSVMKLGEATSMSIDVISTGAIGLDIAIGIGGLPRGRIVEVYGPES
SGKTTVALSCVASAQKDGGIAAFIDAEHALDPVYAKALGVDVDNLIISQPDTGEQALEIAEALIRSGAID
IIVIDSVAALVPKAEIDGDMGDSHVGLQARLMSQALRKLTGSIKKSNCVAIFINQLREKVGIMFGNPETT
TGGRALKFYSSVRLDVRKIDTIKQGDKVIGSRTRVKVVKNKVAPPFKQAEFDIMYGEGISKIGDLLDIAA
DVDIVKKSGSWYSYNDTKLGQGRENVKKFLEDNLDLTTEIDEKVRAFYNLNEEHEESGTSVSKEIVEE
>gi|260686535|ref|YP_003217668.1| putative nucleic acid-binding protein [Clostridium difficile R20291]
MDVIDSVVMIVIGAAVGIIAGYFVRKNISEAKIGQAENLAKEIIDKAHHDSETVQKEKLLEAKEEIHKWR
TEAERENRERRTEVQKYEKRVVQKEEVLDRKLQNLESKEVNLSEKLKVVEKKEEEVEVIKTQQLEKLESI
SGITSDKAKEIILTNAERDVRREMSIMIKEIESQAKEEADKKSREIIGYAIQKCAADHVAETTVTVVSLP
NDEMKGRIIGREGRNIRTLETLTGIDLIIDDTPEAVILSGFDPIRREIARIALEKLIADGRIHPARIEEM
VEKARKEVDNIIKEYGEQAAFETSVHGIHPELIRLLGRLNYRTSYGQNVLKHSIEVAHIAGIMAAEIGAD
IRLAKRAGLLHDIGKAVDHEMEGTHVEIGMDLLRRYKESKEVIHAMSTHHGDYEPQTVEAVLVTAADAIS
AARPGARRETLEAYIKRLEKLEEIANSYEGVEKSFAIQAGREIRIMVKPEAINDEEIHLLARDMTKKIED
ELEYPGQIKVSIIRETRAIEYAK
>gi|260686536|ref|YP_003217669.1| hypothetical protein CDR20291_1171 [Clostridium difficile R20291]
MSQYININSQLDALKLKEFEKIFYENINEDVKVVPKVTPFKGINTDLLYVKDGRILFIKFMDTTEDIFFI
LEEELLEVMNEEYELLKLKMGQKNRNISYNYVYIMPYVEVEETYEFEEFVNNNIIDKNKLQDIMNKGSLE
EYLNDENDEINLNLFLLDICSEYYIINDKLHLNEKFKKISFYNDDYKYTATMMEDVQIKDVVSIKYGNTL
IEGGSGIGKTAIMLSRAIKLAKVYPHHKLVIFTHTKQLCNELRERIELLYKDNNNLEVHTFSSFIFKLAK
KFNLIVDYNMLKNDYEKTFNNLVKQAQNIIKNKNMFKAIFIDEAESFLEYEIDFIREFLYKTKFIFNVCS
CNSLNISNRLNIFKKLYNGIEFDDKIILSKNYRQAKEIVDFTNKFSNNSNSYINELRPNTEFSTFFYTKA
LRGGNKSVDIIKVSDLDDQISSVIWEIEYLISKKGLDYSEVAIVYPYNKKKLKSGKTIYFQYMLKKALEE
AKIPYICAEDNLTNISKKVGTTIANIYAIKNLEYKAVIVCELEMLYNQTINDIEQDYQVNDFVGDLNKVY
LAMSRATDYLSIVTTFNEEASDIIRLITESKDI
>gi|260686537|ref|YP_003217670.1| signal peptidase I [Clostridium difficile R20291]
MIRRKVMSVKKEIFDWIKSIAMAIVLAFVILQFIRPSVVSGESMYPTLDDKDYLILNRISYKVGKPEKGD
IVVFKTNLVDGETGKKKDLIKRVIATEGDRIKISNSKVYVNGKLLNEPYIHNNYTSGDIDTVVPKGKLFA
MGDNRENSNDSRFPDVGMVDEDEILGKVMVRLLPLDNIGKVD
>gi|260686538|ref|YP_003217671.1| undecaprenyl-diphosphatase [Clostridium difficile R20291]
MYWRYFDLETFSLLEIFKAVILGIVQGITEWLPVSSTGHMILINEFIKLNFSNTFINTFLVVIQFGSILA
VLVIFFRKLNPFDSAKNIKQKKETVRLWLKVIIAVIPSGVIGILFEDDIDRVFFNSTVVAIALIVYGIIM
IGLEKRNKRPKYKDFSQVTYKLALCIGLFQCLALIPGTSRSGSTIIGAVLLGTSRYVAAEFSFFLAIPTM
LGASALKLLKAGFGFTGFEWLILGVGSVVAFVVSIVVIKFFMDYIKKHDFKVFGYYRIVLGIVVLAYFFL
L
>gi|260686539|ref|YP_003217672.1| putative tyrosine recombinase [Clostridium difficile R20291]
MKRKGVIMYSTKILDDYEYETFNVFSTKLNPNTKHDYLSKVILFKEFLKGKELIYATKEDCKNFVDYIQT
KYAKSTCEKIYSYLHSFYNFLKKEGYIDINPFRYVEKPTVTRIKTKDDVLSIQEINKLIGILPKLNIRDR
VIIVCLVTTGCLLNELVSLKWKDLMVDENDNSYVRLGKGRKERVVKLHPYFFKLLEDYRNYSGLPEVIIP
SDDFIFTTQKSNSITDRNVRLIVKKALDLAGLSQYSARDFRHSFAAISLRLGADESDVKNQLGWSDKYYA
IRYKYVLNFVDSEIVDYLIEKDNLDINKK
>gi|260686540|ref|YP_003217673.1| adenylosuccinate lyase [Clostridium difficile R20291]
MIDNKYTTYSNPLTDRYCSKDMSYIFSPQFKFSTWRRLWVALAEGEHELGINITEEQLDELRANIDNINF
DEARKIEKEVRHDVMSHVKAYGLQCEKAKGIIHLGATSAYVGDNTDVIQMNEALKLLRVKLVNLINNLKE
FALKYKDMPALGFTHFQAAQLTTVGKRACLWAQDLILDLEDLNYRIDNMKLRGVKGTTGTQASFLSLFEG
DHEKVKELDKKICKKMGYHSSYAVSGQTYTRKLDYQVISILSGIAQSMHKMTNDIRLLQSLKELEEPFEK
NQIGSSAMAYKRNPMRSERIASLSKYIISESISPAMVQATQWLERTLDDSANKRLAIPQAFMAADAILEI
GINVTDGLVVYENMINKRVNEELPFMATETILMEAVKRGGDRQELHEIIREYSMKAAYRVKHEGKDNNLI
ELIMNDDSFKMSKEEILSIMDPKNFIGRAPEQVVEFVNEVVEPAIKDYKEDLGKVDVDLRV
>gi|260686541|ref|YP_003217674.1| MarR-family transcriptional regulator [Clostridium difficile R20291]
MNYIVKDTISFLVKTFPKIYSSLYLEDLKKFAPDYNVNKTQLRALVFIKNYGVISMTDLCSKLNIEKGSL
TSMVDDLTDKKYVTRKRDLVDRRKYLIDITEEGDKIATDFMDKLSDGLGEKLSKLTEEDRKKYLEAINTL
QYILNKEEFR
>gi|260686542|ref|YP_003217675.1| PTS system, maltose and glucose-specific IIbc component [Clostridium difficile R20291]
MKQKMKEFFLQLGKSFLLPIALISAAGIFLGISSAFSNPNIVSDIPFLENNFIQGILGFTKAITGVLFGN
LAIFFAISISVGLAKEEKAVSAFSGFVGYLVLHTSVNYMLGCRGILAEPDMMREMGQAVTLGIQTLELGV
FGGIVVGIITASLHNKYYNIKLPDYLGFFGGTRFVPIITTVVFSILGIIIPYIWPYVNTIIQSVGIGIAS
LGYLGTFVFGFLERLLIPFGLHHILNAMFRFTEVGGSLVVGGQEVFGALNIFLAQLSDPETISFSTEATR
FLAQGKIPIMVFGLPAAAYAMYKTAKPENRSKVKGILLAGALATFVTGITEPLEFSFLFVSPILFVIHAF
LSGISFMMMHIFGVAIGNTQGGIIDLVVFGVMQPNTKWIYSIILGLVYALVYYNVFKVLILRFNLQTPGR
EEITDINFDLEPLSNKVEIAQSGETTKRALSIIKYLGGKENIEDITNCITRLRVVVKDMSKVDENAFKKY
TGAMGVIKVSDKDIQIIYGPSVSQVRDEVSFAMSI
>gi|260686543|ref|YP_003217676.1| RpiR-family transcriptional regulator [Clostridium difficile R20291]
MNLIDKLDINQKKLSTNEISLLNYFLKNSEKINQKKIKDIANETFNSTAYIVRFCQKLGFSGYSEFKNFL
VFSYSNRNERNKEFTKSQSDIFTDVMDTQNLINVENIDMCLNEIHNSKHIYFFGVGSSRLVCTEMSQRFS
AIGVNVKYYDDSTLMYLAASNITKDDLVIAVSMSGETAQVIKACNIAKTNQVKVISLTNISVNSLSNIAD
IKLFVSSPQYNFNSVNYTSRVPALSLMEYMFHKYIEKYNR
>gi|260686544|ref|YP_003217677.1| maltose-6'-phosphate glucosidase [Clostridium difficile R20291]
MTMKKRYNIAIVGGGSTWTPGLLKSLCKMSDRFPLNKVTMLDVVEERQRLIGEFGKILFKEEYPKATLEY
TTNPDEAFIDVDFVFVQMRTGGLKMRELDEKIPLQFGLVGQETCGAGGFAYGLRSIGDMIEMVKTVRKYS
PKAWILNYTNPAAIVAEALKRVFPDDKRLLNMCDQPVNLLRSYGRLLDMDSRTFEPVYFGLNHFGWFTHL
YDKNGEDLVPKIKDLVANSGFQPVDAEQRDKSWLDTYGMVKDMLEDVPDYLPNTYVQYYLYPDKKVAKSN
INCTRAREVMNGREKRVFEECKSVIEKGTSIGSNLVHNDAHGEFIVEVAEAIAHNKHQIAIVITENNGAI
NNLPDDAMVEVAAILTKNGPRPLHVGNIPTFYKGLLEGQLAYEKLAVDAYFEQSYEKAILSLTLNRTIIS
PTKARQVLDALIKVNKDYWPTLYKENEK
>gi|260686545|ref|YP_003217678.1| aspartate aminotransferase [Clostridium difficile R20291]
MNYSNRVSAMQASPIRKLVPFAQAAKDKGIKVYHLNIGQPDIKTPKGFFDAVKNFDSEVLEYATSEGIPE
LLEALQNYYKTYDMNFEKDELLVTNGGSEALLFTMMAVCDPGDNLLVPEPFYTNYNGFGQSVNVEVNAVT
TKAENGFHLPSKEEILSKVDDKTKAIILSNPGNPTGAIYTKEELNILAEIAKEKDLWIIADEVYREFVYD
GLEYTSCGNLEGVQDRVIIIDSVSKRYSACGARIGSIACKNKGLIAQILKLCQGRLCVPTLEQIGAVELY
KTPVSYFKEVNEEYKKRRDVLYNELMKVEGVICKKPTGAFYIVAKLPVENAEDFTIWMLKEFNKDNETVM
VCPAEGFYATPGLGRDEIRLAYILNEKDLHRAATLLKEGLEQYVALQK
>gi|260686546|ref|YP_003217679.1| putative galactose-1-phosphate uridylyltransferase [Clostridium difficile R20291]
MKELRIDPITNDVVIFATDRLKRPLDTADIPNEDEETNEYDEECPFCKGNEAHATDALFEIESEEGWLVK
SVYNKFPIIDDMARDVYGVHEVMIESDKHNRSFYNMSQKEFEDVFFMYRNRFRDLSKDDKVEYVSIFKNF
LRKAGASLMHPHAQILSMSFIPPEITNELLVSKEYYDSNKSSLYDDLIENEISLDRRVVYNGEAFLVLIP
YATKYSGEVRIIFKDKIEFGELNDNNIQELSTIFEKLFKKLYNINGYMPFNLCIHTHPTKIETKSYFNVH
MHIIPRKYNFGGFELGTNMYVSSMSPEDLTKKLKID
>gi|260686547|ref|YP_003217680.1| putative exodeoxyribonuclease [Clostridium difficile R20291]
MRSISMKFISWNVNGIRACVGKGFLDFFKEVDADIFCLQETKLQEGQIELDLPGYFQYWNYAERKGYSGT
AIFTKKEPLKVMYGINIEEHDKEGRVITLEFEDFYFVTVYTPNSQSELKRLEYRTRWEDDFIDYLTKLDN
HKPVIVCGDMNVAHKEIDLKNPKNNMKNAGFTKEEREKFSKLLDSGFIDTYRYFNPDKEGVYSWWSYRFN
ARKNNAGWRIDYFCASKKLEDRLVSADIHTEILGSDHCPVELEIK
>gi|260686548|ref|YP_003217681.1| putative exonuclease [Clostridium difficile R20291]
MTNIKNSDFNDSPTFPEVYNNFIKFISSQDPILCVWGVGDLKELYRNINYHKLPSSSLPKSYINIQQHAS
KYFNNPAGKSIGLQNAISILELDEKMSYHNALNDAYYTAKVFIKIYNPSIVPDIYLYTSIKPKTIRYSNK
KRVDYDKLFDEFRKILNRELTKDEKKIINLAYNMGKTNQFTLENVKQRKNK
>gi|260686549|ref|YP_003217682.1| hypothetical protein CDR20291_1184 [Clostridium difficile R20291]
MYVFINCRFYIAIKRIYYIEFRIQFNCSYLYNFKRTLFIGYSFIEFFIKSLVKFQIENYVFHKVYLLNFF
IISFTIDYIINKIKFSNKNTFILVYPIFVKMLNYCMYNIFSNKKYCELFILDI
>gi|260686550|ref|YP_003217683.1| glutamine synthetase [Clostridium difficile R20291]
MDSLLYVIEKDKHTNEELREILKSNKNIRFVSLMGVDLGGNATDEKIPVELFLEDIDKFLESAIQTDGSS
VELYNIATLNNAKVDLMPDKSCHWYVDYNMEYIDEEVGLPVGTLKIPAFLIHDNKKVCSRGVLQKADKYF
KKSMYEIFREYPHVINNIGIDSVDDIEEIMLTAATELEFWVNTPEDKADLEKLYVSQSLKEQYWKRTHGI
IRTCLEKSLIILQKLGVNPEMAHKEVGGIQSSISIDGRTNHAMEQLEVSWKFSTPLQAADNELLVRDVIE
DVFTSHGLEVTFKAKPIHGVAGSGGHTHVGVSAKLKDGSIKNLFAPKDLKEDYLSELGYGALMGLLYNYE
VLNPIVTASNDGFNRLVPGFEAPVCIVTSLGHSYEIPSRNRSVLVGLIRDMKNPKTVRFELRSPSPLSNT
YLVIAGCYQTMLDGIKAAAKSGLSTKELEKELSKNVGEESFYLEKDRAYRDENDVFEHYSLEERNARFGI
PPATVYENMKNLEIYASKLKSLKQGDVFTDSIIESFKIGAIDKWQKKLKTRIIEAGIQKIRSIVKIHTKE
NMDALDEVVWNSISDLKFNIMKDTLTRESLFTRVREAIENKDYQTASDLQIELKRSMEEIQQLYMQYKKN
IY
>gi|260686551|ref|YP_003217684.1| putative cell wall biosynthesis protein [Clostridium difficile R20291]
MKDDKTILILTAQFGAGHISAAKAVKECIIEKYSNYNVVIQNFINASIPMMNKPMVKLYENNTKYTPGLY
NYYYYFKKSFDSRHDLSHKLYTPKLSEYIADINPDLIISTFPLAAACVNNFKIKNPDINIPTLTVITDVV
DSMEWVFENTDLYFVPSPEIKNRFFQKGINPDSIKVTGVPVDKRFQIESKELCCDKYRLLLLGGGRGLFD
IDEDFMHWIDEFIEEHSNSIEITIVTGKNKKLYDNLTHKKPLKNIKVLGFVNDMYNLIRECDLMLTKPGG
ATIFEAIQSQTPVLVKMPKVGQEIENAKFIIDKGLGMIYSDDLDLKNIFYKLVSNEFDSIINFMKKNLEE
FKTVIHPEKIADYISELIDNHYS
>gi|260686552|ref|YP_003217685.1| padr-family transcriptional regulator [Clostridium difficile R20291]
MNTQFRKGVLEICVLALISKKDMYGYEIVHNISKVIDVNEGTIYPILRRLTKDLYFETYILESNEGPARK
YYRITSLGKENLSNLMEEWREFVKAVEILISEDEGGNELE
>gi|260686553|ref|YP_003217686.1| hypothetical protein CDR20291_1188 [Clostridium difficile R20291]
MNLNKTEFLEILKDYLKKDFSESEVNDILRDYEEYFVDGLIEGKSDMEIIASLGSPKSIAKELILQTKEK
NIEEEKIINTDVLNDKFSKFKSDMKKGYSILKDEAKEKYSKSKENIDGKIMNTDILNGKFSRFKSNIKKD
YSILKDEAKEKYNKSKENINDKLTPSIEEGVGGLSRQVIKGLLVVLSLFLIVPAFAFVCAIVSVTIALVC
SLIAFVILIPFVIKFIAMVPDVMMFCIFATIAFVGLEILAWQILLFAIKLGKQLLNNYIHWIKRKNIYIK
ANEKMEKRKKATLNDEDLNKDINEDSYNNDYYNREEESIKETDEYNDDSINFEAIYKDLEDIENKKGEDK
HE
>gi|260686554|ref|YP_003217687.1| hypothetical protein CDR20291_1189 [Clostridium difficile R20291]
MNKKLAIFAAVLLVIGIIGTTWSGILVMPSLINFGLEKEAEFKKENKLYQEKVNIDKLDISVDNINVTIK
KSSSEDVRVTTRGNNEFYKYNVTLKDKTLVVKGERKYENKIKKIKNFDQLLNTSINSMFSHDYREIIIYV
PNNVDINASSTSSYLFVYDNVASNTITYKTSYGGFSRAITENKVNRLENLNLISNSNLHLSTKSILGVKN
VNIESESLDISSENEDVFINNIEEYIPENVNIKEKIGRNSNYESEFYLYSNMPIAKFLDIEVPNSKVRLD
IPVNKYKFNCDIKSKEAIEEFNNDEEYDNDSYDYEHSEEHSNKYRNTREIKGLLNKNLSNLEKEYTIKIN
SNSLEL
>gi|260686555|ref|YP_003217688.1| putative lipoprotein [Clostridium difficile R20291]
MNKIAVSFLIIATTLLSTACMDYSISAVELVDSKESAVVKKDEDAKEETTSKMINSKKTTKIPIEIISKD
EKIVKYLQIDEESSLKDKLRLILDTLSNEYFNGLDMEVEVKEKDNLVKINLIEPDKKSRVSWKDDYLNEQ
NIIYTINNIIKNVIQEEDNSIWIEEVEIYYNGKLIELR
>gi|260686556|ref|YP_003217689.1| putative lantibiotic ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MKIMNNYILQVKGVSKKFKEQMAVDNISLAIKSNSIYGLLGPNGAGKSTLLKMITGILNPTSGKIMFEGH
RWTRKDLSNIGSLIESPAIYENLTARENLKVHTTLLGLPDSRIEEVLETVDLRDTFKKRSGQFSLGMKQR
LGIAIALLNHPKLLILDEPTNGLDPIGIEELRKLIRSFPKQGITVILSSHILSEVEQVVDEIGIISNGVI
GYQGEVSKEQNLEKLFMKVVAENRKRGE
>gi|260686557|ref|YP_003217690.1| putative lantibiotic ABC transporter, permease protein [Clostridium difficile R20291]
MERFIRVEFQKMKGTFGMKLIWIVPVFCILLCGLGGGQNAAFNWWYTTFLPGALTLISSLIVLKDEKSKY
RGILPLPIEMKDVWAGKMIYCIICCSIASIISAIGVVFVGIIYKETISIGQNIIATILIILLFMWQIPLC
MFLASKFGIFVTVLTNMFFTIVGVAVFSTTEMWYVFPYSIPSRLMVVVLHILPNGLPVPEGSELLNNAVI
LPGVLISVILFVLFALVTRAWFNNREVK
>gi|260686558|ref|YP_003217691.1| putative lantibiotic ABC transporter, permease protein [Clostridium difficile R20291]
MRQLIRIFCSDLIKLKRNFIILMHICIALMGMGLFLWYYKVSGADNILKIVAYLQVIAIAFPLLSGVVCS
MFVEQEYYAGNYKHMLTTSNPKYLTLISKYIILVCLGFVATLVSVLGFKFGISKAYFTSSFYMISILILI
GCNLFEYILHLFLSLRFGKGTSIGVGIVEMLLSALLLTGLGSGIWQYFPCAWGVRFITIWSSFSSSKTVE
YIKVESIKAYQSTGLMCGFVTILAFVILCIWFSKWEGKKSEE
>gi|260686559|ref|YP_003217692.1| lantibiotic two-component sensor histidine kinase [Clostridium difficile R20291]
MAQMLRSKKSNNKKVEKLRTIFIKYLSLFFVMTISFALLLMLSFSVLLSSGVILPANYSEKQFDKYKEKI
ISSEKAIEDIIPNLYEYGVYTLDGNLISGTFNKKESKQVWNLMRDIEERHAYSESYIKFFKKDEVFIIKY
KLVSEYSSPVLRAYLPKPEMLGMIIFSIIFFIEIVILSKVFGKKFNIEMELLKNTTEKIEQQDLDFVVES
SKIYEINNILFSMDKMKLALKNSLEKQWMLEENRKEQISALAHDIKTPLTIIHGNTDLLIEINENPELLE
YMEYISKGVTQIEKYINTLIDISKTENGYILNKEAINMSEFIKDVLLQIEALASTKNLDVEFYKQDNLPK
NITIDRELLFRAIMNIISNAIDYSPSQSKLYISVSVSNKYLKFVVTDCGSGFSKADLSKATEQFYTGDLS
RNSKSHYGMGLYIVNNIVQKHNGILYIENSVKTGGAMVTIEIPIV
>gi|260686560|ref|YP_003217693.1| putative pyridoxine kinase [Clostridium difficile R20291]
MQKKVAAINDLSGIGKCSLSVAIPILSALKVQCCPFPTAILSSQTGYPEFTFLDFTDEMVKYSNVWKNLK
VNFDSIYSGFLGSKHQIEIVANFINDYPNAFIVVDPVMGDNGVMYPIFTEEMRQEIKELVKHSDLTTPNL
TEACFLTGNDYTKSDYNRDELIYIAKSVSDLGPSKVVITGILEDDNILNLAYDRDNDHVFFTSVKYNNCS
YSGTGDIFTSILCGMLVNKHDLGVAVNTATDFIYKTINYTSQFDTDRNDGVMFENFLSDLTNI
>gi|260686561|ref|YP_003217694.1| hypothetical protein CDR20291_1196 [Clostridium difficile R20291]
MYYLGGVALKILKNKNKYIKGIMAFVFLSLATTAGVFLINDLSMKNMEEKVMESANVEGDDVKDQYKLLL
ENLFDYRNKAILEKNENILKGLYETDKKFGLWAYENEVKKMKYLENWSSKQGVKFKDIKTRVKIKKIKEK
EKDLYGIICSVSTEYKYSYENQKDKENAFRIGTYHYLNVKIIDNQYVITKEWYTDPFADSLNLENIKSED
IRNYIGQQDGVELQLTDEQKKAIDYAHKYCGAAADEEHGMKFNPNYRDYNPEGGDCANFASQIMFESGRF
KKNSIWNYSERAGTKAWVNAQAFKNYALYSGRGSLIAKGSYEEVYKEAYNLRPGDFVGYEKKGRITHVST
VTGLDSRGYPLVTCHNTDRMLVPWDLGWSDKSIRFHIIKINY
>gi|260686562|ref|YP_003217695.1| putative cold shock protein [Clostridium difficile R20291]
MKTGVVKWFNNEKGFGFISVEGEGDVFVHFSAITGDGYKTLEEGQSVEFEVVDGAKGPQAANVVRL
>gi|260686563|ref|YP_003217696.1| putative regulatory protein [Clostridium difficile R20291]
MNILFFLTPKSEVAYIYEDYTIRQALEKMEYHKYSAIPIISKDGKYVGTITEGDFLWTLKNDLNLDLKGL
EDVPVTDINRKMDNSPVSINADIEDLVIKSLNQNFIPVIDDQDTFIGIIKRRDVIGYCYEIIRGYKNLAN
DN
>gi|260686564|ref|YP_003217697.1| putative peptidyl-prolyl isomerase [Clostridium difficile R20291]
MKYTMKELTIMEKKVLATVGEKEITNIDIENALKSLDPYQAMQFKTEEGKKHLLNDLVNQELFFLDAKEE
KLDEEEIFKLEMKKIEENVLKQFAINKVLSSVNVTEDEKVKFFEANKSSFSKPESATAKHILVDSDEKAK
EILAQIKSEEISFEDAALKHSSCPSKDMGGDLGTFGRGQMVPEFEEAVFSMAKGEVSEPVKTQFGYHIIK
LEDLQESTESTFDEVKAEVEKSLLYQKQNEVYGNKINALNAKYGNLVKYND
>gi|260686565|ref|YP_003217698.1| hypothetical protein CDR20291_1200 [Clostridium difficile R20291]
MYKEKLFDNYFKFLALLFWPIMWYKWIVISNGTLENMLFTIYAIVAIIFIILYSVFMIKYKDITQIDFFY
RISTLLAFIFTLFSFLIYPKSLFFLYLKIIFTGIYLYYSIVKTLKFKDDEGVVGIMSSLLLIVITLFY
>gi|260686566|ref|YP_003217699.1| putative phage-related protein [Clostridium difficile R20291]
MNNLDKLFELASQEEIIIHYTTYIAGDLEGLYINKHGIKIISLLSNLKQNSKKLTSILAEELGHHFTSLG
YYVSSYNDYYTKIIIDKCENKALKWACEFLITEEDIINIINSGITCVYEMADILNVDITFFQKRLEFLSL
KKQSLQLGNNKYLILTNLPYFYIFDPIS
>gi|260686567|ref|YP_003217700.1| putative phage repressor [Clostridium difficile R20291]
MFAKRLRELRKEFGLTQRELGEKVGVSQRVLGYYETENRFPDEHILNKLADVFNVSVDYLLGRTLVKENI
DTVAAHRKNPHEELPEEAQEQLNDYIEFLLNKYKKK
>gi|260686568|ref|YP_003217701.1| putative phage regulatory protein [Clostridium difficile R20291]
MFKNNLKYYRKCKGMTQIQLARKAGITNDYISQIERGIKNPGLLMAKKISSILEQNIEEVFFIQL
>gi|260686569|ref|YP_003217702.1| hypothetical protein CDR20291_1204 [Clostridium difficile R20291]
MENKKDILFKETDERLHNYKYLDIKIKNINLDIKRCENEYSGCGAMVYTEKTSNTYNISSSVENEVLKRE
ERLRKLKMEKEDIEIEKEKIENALTCLNDIEMEFFNLFYNSKTKNNMTYISMKLHLDRTSCYNLKKKMIF
KLSEIL
>gi|260686570|ref|YP_003217703.1| hypothetical protein CDR20291_1205 [Clostridium difficile R20291]
MLKYKEILETIIEILKKNFTESIFIDDESVQGSEGSCFFVSILSVICTPIMLNTNNKDIVISIKYLPKPQ
SKSIRMYEISDELNKLFNRNIKVTDRKLNITKLEQSIKKEESIYVLNFTITLNYLDSVYEEDVVYENMEE
INLNLGE
>gi|260686571|ref|YP_003217704.1| hypothetical protein CDR20291_1206 [Clostridium difficile R20291]
MAIGLPSINISFKELATTVKERSARGIIAMVLKDAKALGLNEIHEKEDIPVDLSAENKEYINLALMGNVN
TPNKLLVYVIEGEADIQTALDFLETKEFNYLCMPKAVEADKTAIKNWIIKLRDIDKVKVKAVLGKVVGNH
EGIINFTTEDVLVGEKKYSVDEFTSRVAGLIAGTPLSQSVTYTKLSDVVDIPKMTKVDAESRVNKGELIL
IKEAGAIRIARGVNSLTELTEEKGEMFQKIKIVDTLDIIHSDIRKVIIDDYIGKVTNSYDNKCLLIVAIK
SYLEELEKSALIESDSTVEIDFEAQKSYLKSKGVDLSYMTLQEIKEANTGSKVFLKAKIKVLDAMEDIDL
SIEI
>gi|260686572|ref|YP_003217705.1| hypothetical protein CDR20291_1207 [Clostridium difficile R20291]
MANMEARNVMSGTWGELWLDGNKVAEVKKFQAKMEFTKEDIIIAGQMGTDTKYMGYKGKGSITLYHVSSR
MHKLIGEKIKRGSEPRFVAISKLNDPDSYGAERIAVKNIAFDDLTLADWEVGVKGEIEAPFTFTEYDFLD
II
>gi|260686573|ref|YP_003217706.1| hypothetical protein CDR20291_1208 [Clostridium difficile R20291]
MNENGLSKNINIVDLLLNADTENLERPSTIVELKRLSTIFGQEFKVMCRALTISKDEEIQNTCLKIDENM
KTDIDLPEMQMLTIIEGVCDLDGKLLFKNKELMDKFKAPTPKELARKLLLPGEITNLYRILQDVMGYGKN
AVIEEVKN
>gi|260686574|ref|YP_003217707.1| hypothetical protein CDR20291_1209 [Clostridium difficile R20291]
MYYYWKKKGIRPSLFYAMDKGELKLIEAFFALEIEEEVEKMKHGYGVCPLTGGGM
>gi|260686575|ref|YP_003217708.1| hypothetical protein CDR20291_1210 [Clostridium difficile R20291]
MSFDRRWYVMGNVREEGINMYLTDNYTPKMNQIISVTDNFRRATVAVSLSTNVMASSIKNSIGSASSRVN
SLNSSLRKVQTTASSVSSTMAKLSSSINAVSGVIGSLNGSIMRLAITIAMIIDYFNKLIQKKNEFNSNIM
IILIFKAKSDEVEKTKNKLLGNLKKIGGKIWNIVIKAKDMTKRVISSILGKLKRVEKRPYQGSINLKDMV
SSAMARILPKLMLFKNTFWSGVIAIKDMASSIISKVFPKLRLFAGKVWSGAIAVKDMASGILGSIKGKIS
DLTNGATIGVAVKKGVDLLGQEQNQKVVLESVMKRNTGKTSQKDVDKYYDSLVNMANDTPFDPEDVVAMG
TKAKMISNITGGKKEKDITQAMVDVRALNMNTSSEQDVSAAFLSAAKGNMESLNTLVGENYKTFDEALEG
ISVKQMGLAKEMSNTIPGIISGAQTSINNGLKSIVKPFDDILGQGLKKIKTFIESGLGNLAGLSEKMAGK
IGNVMNGKIIIGNKYDQMQSRSVKNGKEFSDSTQYRISNEAEKRKMMVENKQERFENHAATMIGNAPKAI
VNAGSTLLQNIDFTALIDSLLPVVNLVNNLLDSINNKSPIAQGLISIFGTIVTTAFQLIGPVVEAVSPII
TRIFTFLGEYAPQINNFIETLGVIWKTVWETLGPLLETGWKIIEPILGAFFNILDKVCKIVKDICKWWQT
MINKIKNGSITGTVLNLVEKSKKNYKDNPYAGTKAGDSGKAYSSKKGNNAFGLNYVPYNDYQTRLHEGEM
VLTKQEANQYRSRKNGGNINIAKLADTIVIREEADIEKITSKLVASIQLAQLGGVL
>gi|260686576|ref|YP_003217709.1| hypothetical protein CDR20291_1211 [Clostridium difficile R20291]
MEMWLRQAEDRFRFPVFPSSFSINGKAAVNSSSILKIGEVATFGGVALKSISISSFFPNKDYTFCDYTGF
PSPYDCVNKIEKWMKEGFILRFTITETNINMEVIIEGFSYEERDGTRDVYFTLDLKEYKRIKIPKVTPKQ
>gi|260686577|ref|YP_003217710.1| putative phage cell wall hydrolase [Clostridium difficile R20291]
MIINRSKDSSSNEISFVSKDMGFLLTQSEVSYNFKDKLVEDIAKQVFAENRLSVGTIAKTNVKYTKMFIG
VNGYDTIMSAYTEASKKTKKKYMIEANLDKFNVIEKGTVTLSVMFEEGFNIINTTFSESMENVKNKVIVV
DQYGSKISEKIDNEIFKEVNVIMQKVIQQQENQDVDIDSEFNGIEKSCSLKGYGDVSCITGRGVKVKDSY
TKLVGLFYIDTDKHTWQNGEYQIELELNFQNLMDEKSAGQDEPKEESNLGGEDYAGGKEFTAEFTAYCPR
KEEGGDTDCRKKKLDPSKKTCAAPMVGKYEQTYYTKEFLNKHPLLNYGDEIQVITGVSGRDGVYKVNDVG
PAITIEKNGTYHIDILFGNVEEASKFGRRKGKIIIGGYSGNVSDKAKIVISEAKKHLGKPYKWGGNGPSS
FDCSGLMVYCFKKVNVSLPRTSNQQSKKGKKVEQKNLQAGDLVFFHNPVSHVGLYIGNGEFLHAPQKGDV
VKISKLSSRRDFNTARRVL
>gi|260686578|ref|YP_003217711.1| hypothetical protein CDR20291_1213 [Clostridium difficile R20291]
MANPINEFIGIIREEGKYHNQPSFFIGKIKSKLPDLKIETNNIILEKEDILIDSWMIDRQLETFDTETNQ
EHQHEVKNPFIDNFESGDMVIMFRIGEKFAVVSKLVSL
>gi|260686579|ref|YP_003217712.1| phage protein [Clostridium difficile R20291]
MSTIFPFIGVPEDYILPKTEELPIFREVAWDFEKDEPILEKGDFKIIEKKEALKVWIYKCIKTNRYEHEI
YSLEYGTELSELIGQKYTKGLTESEASRFIKEALLINPYILEVNVKSANFNRDVLSANVKVSTIYGEVEI
NV
>gi|260686580|ref|YP_003217713.1| phage protein [Clostridium difficile R20291]
MYSDQTYEVIKNRTLENINLDIYKGEGSFLNNMVSGNNLELSKIYLELSKIHKMAFIQDTYNQFLDKRVN
EFGVYRKLGTESNGEVEFIGEKGTVINNGTIISYRDLLFVVIKDVTIGSEEGDNSPVQALEVGKKYNLPT
NCEFKLVDNISGVTKITNTRSFEGGTDIETDEELKERFYKIQRNQATSGNKAHYEEWALEVDGVYNVKVY
PRWDGPGTVKVLIFGENNQAVDTETIERCQQHIDEEKPIGPTITVVTPLPIEISISAVMKLEDGYTLDNV
KESFLESINTYFRDIRGEIIYTKVMGILINTTGVHDLSNLLINGSTDNITINEDKIPSVTTVNFSEVENQ
>gi|260686581|ref|YP_003217714.1| phage protein [Clostridium difficile R20291]
MKLIDKLPSFDRNYIVEEIQGAYDTELNILKEDIDDTFNQLFVDTATWGLDMWEDILCIEKKELDFDTRR
SNIKAKMRSRGTSTIEVIKSICEAYTKSETDIKVYSDEFTFVLSFIANNCDYKTLLDCSEMIERVKPAHL
LHYLEPIILDKSMVYCGGGMVCSEEVKVHPYFEPIIKCSAVVNCGAGMLSREEIKVYPLSIKCIENNCKI
NIAIANDTGVENVVVYPKSEVV
>gi|260686582|ref|YP_003217715.1| putative phage tail fiber protein [Clostridium difficile R20291]
MEEKFYIILTKIGREKIANATALGELVGLTKFQVGDSNGEYYEPTEEQTALKNVVWEGNINSLRIDEKNP
NWIVIETILPGTVGGFMIREAAVLDNENNIIAIGKYPETYKPRAEDGSIKDLVVKMILQLSNTSNVTLEV
DPTLVFVTQKDIQDLDDKFDKNIKEIKVKIGDTDILTTDSKDLSGAINEVVKKIENISFDDVISGQIQTD
ISVLKNSYNKLSEKVLDILIYLELESEVTVDEAGYWYDTLANGNNIVAIEGLKLDLNRKCITGEIGNVIF
RDVVLPFSANRVRYIHDMDNNFVETKSSNTYLKEQKDITLSKYSYEIR
>gi|260686583|ref|YP_003217716.1| hypothetical protein CDR20291_1218 [Clostridium difficile R20291]
MKQNKLLQRGAYFNDKNILIDDFDKRYNDYDFVEFFTGISNSTFGLKSDGNLYACGDNTGFQLGLGKDSS
ERRMFSKVKIDNVKYVSCGSKHSVAVTKDGFAYGAGTSNVGQLGVIESTVYYEFTKLPIDDVKTVACGYD
FTFVLKNDGTLYSAGLNSSGQLGLGDTNNRATFTKVNIDSVKDVVTYNQSVFIIKMDGTAHACGLNSNGQ
LGINSTLNKSVFNKIEGMDNVKQIACGSSHTILIKNDGTMYTTGYNGVGQLGTGNNNNSIVFTLSSINNV
KYASCGNNHTMILKYDNTLFSTGQNNYGQLANANKDVASRNTFAKVNVENIKDIKCGSQFNFLINGSKEI
FVSGCNLAGQLGSFFHTTFLYEFSNVQSSNLDNYSGLLVNDDYLYVTKDNSEFLNVKLSDNFQDYKKIEL
TDSNMFIVMNDGTLYACGLNNYGQLGLGDTVNRSVMTKVDIDNVLDIKGNGNSTFVLKNNGTLYSCGLNS
NGQLGLRDEVNRNIFTKIEIENVKDFCVGSNYVIALNHSKEVYGWGNNPYNNIEKTSNYPYKQGISNIEK
IAAYDYSVYMINSEGKLYVSGYNYNYQLGKGNNSNQSKALVSQCRTNSTSSTSNGLRTLPKITNVFPFYD
GCAIIDEGGYVYLTGYHGYLRTLNSSPSISDYSRYGTFIEATNSNHNTYFIQETDFSGIEKVIGMSNNIL
FFKKGSSYITGYPKTFGSTITGHRSYTSINSESSNLGSNFIIYHSNSKLYGKGIANSGQFGNSTNIDGTS
NYDTGLKDIKDIIVKGNTVVVVDKNNNIYVTGMNQNNKLGIGEYNNEPVKKFTNITEQSNSFIFMDDIKE
ITTSRNTMFIVKNDGTAYATGNNSSGQLGLGDTINRNKFTQINLDNIKKISTSIDGNTTFAIRNDGTLYS
TGLNTKGQLGLGDIVNRNTFTKVNIQNVRDVVLGTTHSHAIKDDNTLYSCGENTHGQLGLGSESNHPDVL
TFTVNNITNVRDVYCSDTTTFIVKDTNIAYCCGYNNNSQLGMGNTTDQYSFIKCMENVKEVIPNEINTYI
ITIYNTAYSTGLNTDYCLGLNSNSNQSSFSEIPISNVVKVAPNRNNAVLLLTSEGDVYTAGKCSNGSGTG
SETPEKIKKIASKAKDIGMNYRCGHYVSDNGDLYGTGFNNNGQLGVGDVTKRDTFIKTNTRVKKILPLEY
ANIAIKDTNDIYICGLNNYGQLGVGNRYDSRNNDNRIFNYKHMNFVMGDLTSIKNRHNFILLNNKIVIPT
TKDIDYGLVLGNLYKGDLYTELPYEDIKEVSISKTHIIILLNDGTMYGCGTNYHGELLQDLSINQVDEFV
QINVSDVKHVSCGDNFTYFIKSDDSLWSIGKNSEYQLGIGHNNPVTELQRITTISSCKEVHCGKNYTLVV
TTGNELFVQGYNDKGALGLGSDSENTIIKFFTKALTDIREIKSYGSDHILVLKNDNSVWVTGKNRDVYKI
EQPVEFLKEFTIVPISEDVNTVKDVLATDNTLYIISEVGTTNAAIEITEKSISSIKIKIQDPNKDISRIE
MLINGESVKSVSDLTTEKISFEVPPDKIKIGENKILFRAYCKGDDLYASLFIFKESTGNSIIKDSYVMIG
NRMYKVVNTTSNEQDITITLDRGLEEDLNLGDPIYQLINKTKVQVKINKSDLFKDMKLVEIKKSDSSYQE
IYELEEANIKSAQPKIIVEKGDKWTAIKRPSMIFRYDAENNEPQA
>gi|260686584|ref|YP_003217717.1| putative phage-related protein [Clostridium difficile R20291]
MVEVYVALILRGRKTIEEVPAVIREQVRIRCKELEIPVE
>gi|260686585|ref|YP_003217718.1| hypothetical protein CDR20291_1220 [Clostridium difficile R20291]
MDKLITELSSLGAIGILCALLFKNTMQEKKEDRDMYKKTVENFIELSTQQQEINKNILVQMGIMKTDVEE
IKEDVTDIKGMLQNGV
>gi|260686586|ref|YP_003217719.1| hypothetical protein CDR20291_1221 [Clostridium difficile R20291]
MGLRDKFAQSFARSKTMSGPEKKANEIMGKLLLKKAILPIVLMFVIIIAGAMLKINSWVTLGINLVIAVG
AFFYIRNSSKKYQNFKPYVGNLISLEKKGKKEYVAIIKQGKLPVKLQIAYGGEDLEHVKKNQMVQISYNP
DAKIAILVNRQ
>gi|260686587|ref|YP_003217720.1| putative phage regulatory protein [Clostridium difficile R20291]
MDTLGERIVYLRKAKNLKQYELEEMLGCDNLSKFERNIRKPNYEILKSIAEIFNVSVDWLLNGDNLSHKS
DLICDSSSNYPLNSINSNEIKLLNNFRKLNDYDKAKIEGMIELKLHEYEKEKDLGKIEYNKNKDEKIDK
>gi|260686588|ref|YP_003217721.1| putative phage regulatory protein [Clostridium difficile R20291]
MDARKKWIPFLGVQVKQRLIELNMTQRELAKKIGVNENYLSAILNGRRTGKKYKSSIYQLLNIEYSEDD
>gi|260686589|ref|YP_003217722.1| hypothetical protein CDR20291_1224 [Clostridium difficile R20291]
MNILVCKLDSDGVIECCRAIDDFITALSNIKSLNMERLNTLTKYSSTCSILLKEGNYEGCTIVYRKMLEE
LKT
>gi|260686590|ref|YP_003217723.1| putative phage regulatory protein [Clostridium difficile R20291]
MYFVDTLGKRIAYLRNSKKLTQRKLMDILKFENLGKYETGDRKPNCDILMSIADYFNVTTDWLLYGKEKV
NVNSSVKEDKEDYLHVTNDEMMILNLYRQLNERDKIKIEGILELKISEYKDLKKHSSNNNEDKMV
>gi|260686591|ref|YP_003217724.1| putative transporter [Clostridium difficile R20291]
MVFTLNHNTSIKNKDSNPKIFLVLTLYLLGIFMGAIDTGIVSPARTIIQNSLGVNEKTGIWMITIYTLTY
ASVIPISGKLADKIGRKYVYLVSIFLFGSGSLICGLSSLFSNFYILLIGRVIQAIGGGGIMPIATAEFGT
TFPENKRGMALGLVGATYGIANILGSSIGSTILSIFGTQNWKWLFFVNLPICLIILIGGVFCIKNNKSES
KEKIDKLGTLMLICIIVSLLYGLMNIDFFNFKNSIQDISVYPYLLTFIVLIPIFIFIENRAKDPILSFEY
FLNPRILIVLILSLIVGIGMMGMVFVPQYAENALKINAGSGGYFVAILGLFAGIAAPLSGRLIDKFGAKK
ILLLGFSVSMIGSLYLVLIALKTNTVFSVCVSLIFMGLGMGFTMGTPLNYMMLSNTRLEESNSALATLSL
IRSIGTSISPAIMIGFIAHAGLSVQDNIMDLVGKPSTPKIVQLEELENMIDDLKSDPEMAKNLKNVSIPN
MNDTSNINMDMTGGKLPKSLLNKVQSADTTNITNITKEISTTMFDEKVPSIITKIQKNVQKGIDGTQSGI
NGIEDGENKLNSGIKGVQTGIDNMVKARAGINQGIDGVKKGIAGVDKGIKGMEQGLEKQDEAIKELTTAY
NKIPTTEKTPTDNENNSNEQNQSNTSNSESDDTKNDSTENKNNNSSENKPNVNEQKESLNAQIQQLKKTR
DDLNTKLQKNKTQKNELSKKLRSMESQKKELQSKLNNSINQKKDMEKSLDTMQQQKKSLQAVLAKTQEVK
TEIPKAFDKSKLDYINSIENNRTKIENTLQSTLNSGFKQMYITVFCVNLLAFIILLFYKENKTR
>gi|260686592|ref|YP_003217725.1| TetR-family transcriptional regulator [Clostridium difficile R20291]
MPKILENVKEDILKVSRDMILEEDYSNISIRKIAQRCGISAGTVYNYFNSKQEIIEYITKSEWDLLIRRI
EYSNKNTEDYIKKLNIIFTEIRNFINKVHNIQYNDFLNTFETERFFEMKKHKDDFHEQLSNKVYEALEKE
SFFNNDKLVCNIIIKMFFSYSTYLHIEFEDLKPYIEKLIH
>gi|260686593|ref|YP_003217726.1| glycerol kinase [Clostridium difficile R20291]
MVMEKKYVMALDQGTTSSRAILFNKKGEIVKIAQKEFNQIYPKAGWVEHDPMEIWGSQSGVMREVIETAG
IRPEEIASIGITNQRETTVVWSRYTGKPIYNAIVWQCRRTSEICDELKNKGLEESIKEKTGLLIDAYFSA
TKVKWILDNVEGAREKAEQGELLFGTIDTWLIWNLTRGKVHVTDYSNASRTMMYNINDLEWDEDILRELD
IPISMLPLVKPSSYVYGHTDERMLSGAKIPIAGCAGDQQAALFGQNCVEEGTAKNTYGTGCFLLMNTGSN
IVKSKHGLLTTIAWGVDGKVTYALEGSIFIGGASVQWLRDELKIIESAKDSEMYANRVEDTNGVYVVPAF
TGLGAPYWDMYARGSILGLTRGAKKEHIVRATLESIAYQTKDVLEAMQNDSKLKLKSLKVDGGASNNNFL
MQFQSDILNVDIDRPKIVETTALGAAYLAGLSVGFYIGRNEITSKWSVEKEFNPNMSEEKRCKLYKGWKK
AVSRALSWEKEDELDI
>gi|260686594|ref|YP_003217727.1| GntR-family transcriptional regulator [Clostridium difficile R20291]
MDKNYTMPIYQKIALDIANKIYTGEIQEDSVLFGRSVLAGKYNVSPETIRRAVKILEDIGVVKSIKGKGV
IVLSPDKASSFIKKYRDITNISSYKSTLYNLIDTKSNLENEILDTINKILDYSNRLEIINPLVPVQFTIN
SNCKYIGQTAAQTKFWQNTGATIVAIKRGEELIISPGPYIEFLEGDILLVVGDQHIYNSIPMFLYENEK
>gi|260686595|ref|YP_003217728.1| hypothetical protein CDR20291_1230 [Clostridium difficile R20291]
MYKVDLNSDLGESFGTYKIGLDEEVLKYISSANIACGFHAGDPSHMEKTVQLAKKNGVKIGAHPGFLDLI
GFGRREMKITKQEAKDYTKYQLGALMAFASSNGCNIQHVKPHGALYNMAAKDKELAMGICEAIYEVDKDI
ILLGLYNSEMINSAKEIGLRFANEVFADRAYDNNGFLVPRSVEGAVIHDTKHAIDRVVRMVKEGTVETLT
GEVIHIKADSICVHGDNPKAIEFVKEIRKRFELEGIEVCPLENIEVCSSENIV
>gi|260686596|ref|YP_003217729.1| putative transporter [Clostridium difficile R20291]
MSTKNITDKTKNKKDVGALIGAAFIMATSAIGPGFLTQTAQFTQDFGPNFSFVILITTILFIGAQVNVWR
VIGVSGLRGQDIANKIIPGLGYLVAFLVALGGLAFNIGNVGGAALGMNVMFNMNMTLGTVLSGLIAIFVF
MSKNSNSLVDKITKFLALGMIIIVGYVAISNHPPVGEAVSRMVKPENPKGLIFPIITLLGGSVGGYITFA
GGHRLIDGGITGEENIKEITKSSLLGILVDTMMRVLLFLAILAVVSKGLQLDPENPAASAFKFSAGAIGY
KFFGLVLWSAAITSVIGAAYTSVSFLKTLNPFIDKYEKYFIIAFIAISTLIMAFIGKPATLLILAGALNG
LILPITLGIMLIASKRKDIVGDYKHPTWLLIFGLIVVLISAYTGITSLSSLGALFA
>gi|260686597|ref|YP_003217730.1| putative allophanate hydrolase subunit 1 [Clostridium difficile R20291]
MLYLLNLEEVTFMETRYLISGDKAVVAEFGNEISEDINKKVISFMRAIEISNLKGIVTEMVPTYRSLMIS
YNPLEIDFDSLIENLKKIEDNLESIVLPKPKIHEIPVCYDEVFGIDIKNVASYNNLTVDEVIKIHTSREY
LIYMLGFTPGFPYLGGMDERIATPRLEVPRTKIYGGSVGIAGSQTGVYPIDSPGGWQIIGRTPLKLYDEN
REEQILLRAGDFIKFVPITLDEFIEIEKNNLSI
>gi|260686598|ref|YP_003217731.1| putative allophanate hydrolase subunit 2 [Clostridium difficile R20291]
MGFKVELGGFQTLIQDRGRVGYGQYGVSGCGAMDEYAHRVGNILVGNSEDEASLEVLMLGPTITFDEYTQ
IAVTGGDLGAKINGKEIQNWRSYQINPGDVLSFRGVKSGARAYVSIAGGIDVPLAMGSKSTYTRSKIGGF
EGRALKKGDYINTFIQEKDFTINKKLNSKYIPTYSSEIVLRIVKGPQFDAFSNGEVEKFLSNKYKVTNEI
DRMGCRLDGESIKHLNGADIISDGISYGAIQVPGHGKPIIMLSDRQTSGGYTKIGNVISVDLYKLAQAKP
NDVVKFELVDIYEAHRLLREQEDKIQDIYKSMKNIRVVKAKVLNDIAV
>gi|260686599|ref|YP_003217732.1| hypothetical protein CDR20291_1234 [Clostridium difficile R20291]
MLGEKMRNIRKSKKKTLSDVSKLTDLSISYISQIERDAIEPSLSSLRKIAEVLDTPLYMFMDDNNTDDLV
IRKEDRVMMKFPKSEMFYEIVSPMPTTEFTPSILFVEFELKPESEDAKDYIYHASEEIMVVTSGVVDICM
GEKVVRLNPGDSTFIKANVPHKIINPSKDTIARGYGVISPPIWPIKSK
>gi|260686600|ref|YP_003217733.1| putative chloromuconate cycloisomerase [Clostridium difficile R20291]
MKITDIKFEKLRIKLKKPVVVSFGVIEYGESVILKIETDEGYCGFGEAAPLAAVTGEVLDNVLSVLLMFK
KELIGKDPLDIETIHTIMDGIIIGNTSAKAAIDIALYDIKGKIMNAPLYKVLGGFDSKVQTDITISIDKP
EKMAVEALERVKEGFRILKLKAGINPEDDIEAVKLIREAVGESIRIRIDANQGWNVNSSINTIKKLEEFN
VDAIEQALPHWDLDGTAYIRNKSNTKIMIDESLHSPIDAIKAIKKNAVDTFNIKLMKSSGIYPAIKINNI
AEASGVNCMLGCMLETRIGITAAANLIASKKNITEADLDSFMFCEESKDISGGFVMDGDIMNLVNKPGLG
IEVNL
>gi|260686601|ref|YP_003217734.1| hypothetical protein CDR20291_1236 [Clostridium difficile R20291]
MNTLFSNPGSILAVMTSMIALGFYLQRYKAIKSLGPALTIIIMGIILSNLKVVPVSTELYGTISTYAIPV
SMTIMLMSVDLKEMTKLSREPLIAIFVAVLTVSIMAFLFGLVFAEKISEGWKVAGMFVGTYTGGSANLTA
IGTGLNVSRQTLAAANAADYVIGVPTLIFMFALPAILKNSKKFKKLWPYHVEETELEDCQNEEFMESKEW
SIKDIAWMLAIGFVVTEVSTILAGYFNSSFSSAARILLVTTISIIIAQLKPVKKLKGNLDLGLFVALFFL
CTIGFSVDIKEFLGSTFTITLYCFSIIFASFVFHLGITRLLKIKYQYVILSIVGAIADGPTSALVAASAK
WNSLVSVAVVMGVIGGVLGNYAGISVAYAIKMSLGL
>gi|260686602|ref|YP_003217735.1| putative esterase [Clostridium difficile R20291]
MIKFKLYISGLYSGNVIFDGDLLIEKLNPFTNKIESLKPISKEENTYYLNLTKIDLKSLFNNFDVYTKSL
VNTDKDTVINNLGETHSKLNEYIWVQRNKKFPLDIIIVDNKIVGFICLSRETCTILIMDGYEEYTVLKEW
EKTHKNEEIYSIRFGGNYMIDMKDGIKLSTDVYLPDFVDSTKKAPTILMRTPYGKENDKEIYYKYVQRGY
AVVIQDVRGRNESEGKWEPMIHEREDGDSTINWIVSQEWSSGIVGMLGASYLGYVQWAAASSGNKHLKAL
VSIVTSGSPFIDIPRKGGAFVSGMLAWAFMVSRNKVDRSKMVRDDWDDVLNIRPIENIPVEALGYRIEFL
EEWLKRVEKDEYWDLMDWHLQKDKINVPALVVSGWYDDNSMGTTEALDVIKDYEKGKRKAILGPWMHNSN
TLRDINGISLGNSSLRYDLDYNYLLWFDKYLKGIENNIDTTAPVEYYSVGFNKWKTEENWPIINKIDKSM
YLISDGNANTSLGNGRLVFDNDLEEKYDSYIYNPKDPSVQLIDMSENEVGVPNNYKDLEKRSDMLCYTSD
AFSEEFTVTGDIKLEFFASSSAKDTDWVIKIMDVDLDGNSIKLADGILSARFRNSFYKSEFMEEGEIYKF
TIITSKISNTFKVGHKIRLDITSSAKNFIFQNSNTKEGYNSIEYIEAKNTIYHGGKYPSKLILPIENK
>gi|260686603|ref|YP_003217736.1| putative endoribonuclease [Clostridium difficile R20291]
MEIKRYEGTGRMSRAVVHNNTVYLCGQTHAEGGVIEQTTEVLAKIEDLLNKYGSDKQHLLSVTIYLRDMK
DFEAMNSVWDAWVEKGFEPARACVEARLAREHLLVEMSVVAATK
>gi|260686604|ref|YP_003217737.1| hypothetical protein CDR20291_1239 [Clostridium difficile R20291]
MSSTIKSNRIKGIMFIIASALGFAMMSAFVKLAGDLPSFQKVFFRNLVSAIIAFWLIIKHKGSLTGKKEN
LKVLLYRSIFGTLGVIFNYYAIDKLMLSDANMLNKMSPFLVVIFCAIALKEKINVKQIGAIIIAFIGALF
IIKPTFSVEVIPYLGGIAGAVFAAMAYTCLRVLGDREDYYTIVFFFSVFSLVTVGPIAFAVYEPMTLMQL
IYLLLGGVFASLGQFGITLAYKYAPAKEISIFDYSNIIFSAILSIFLFNVYPDMLSVVGYLIVFSAAFYM
FLYNKKLDKLDKEKKK
>gi|260686605|ref|YP_003217738.1| putative oxidoreductase [Clostridium difficile R20291]
MEKVKVAVIGAGNRGTYAYAPYIYENSDICEIVAVAEPKKGRRELFTQKYNLDSKNVFETLEDFFKHDKM
ADAVIIATNDDRHYDVAKLALEKGYHVLLEKPMSNSLDGLVHIDDLCDKYKDKIFMICHVLRYSPFYNKL
KEIVESKKLGELVSIQYNENIGYWHFAHSFTRGNWRNSNETSPLILAKSCHDMDILLYLVGSRCKKISAF
GSLKHLNNQNASGEMAQNCLQCLVEKKCPYSAKRIYLEKDRSINRAVHINPTEENLLNILKTSPYGRCVY
RCDNNVVDNMVNILQFENGVTATFNLCAFTKENGRTIKLMFSHGEVGGDLNKNEIRIKKFGKNEEIVMNP
SNQQNMVEEYDRNLIAEFIKLVSNKELEKGRVAAKEAIQSHVMAFAAEYSRVSDEVVYIEEFFDSAKQMT
KEIEETIF
>gi|260686606|ref|YP_003217739.1| hypothetical protein CDR20291_1241 [Clostridium difficile R20291]
MIKISNKRRIPLGEFISVFLFFAVFFGITFCIFTVIGIGFLSFLGFEYKSLGAVLIFFLIYFCITTPIDF
LCTTILDIFRYVNKLPYSIYKLCEFIIDFILTFLAMNIIDTFMDSVTIPLSTEILFALLSYLLSECMDFF
DRDKKKP
>gi|260686607|ref|YP_003217740.1| putative amino acid amidase [Clostridium difficile R20291]
MYFLLSVIIINNKHKGVYIMKLYLSADIEGTCGIVNWDETKLECEFSQHYRTQMSKEITAACDGATQSGV
HEILVKDAHDSGRNINPNILPENVKILRGWTKDPLVMMAGIDESFDACIFTGYHSGATCNGNPLSHTMDI
DYDYFKINDEIASEFTINAYIAAYYNVPVAFLSGDEMLCESAKKLNPNIVTVPVSKGIGNGSISIHPNLA
LKKIEKGVKKALSGDLSRHLIKLPDKFKIEIKFREHYKAFKASFYPNMKKIDSQTVLFETEDYYEFLRML
LFI
>gi|260686608|ref|YP_003217741.1| hypothetical protein CDR20291_1243 [Clostridium difficile R20291]
MKEILINPIGKICIQGEEVFIKLDKKYVPALNELDDFSHLNVFWWADGFDNPELRSILETPKPYKSGPNV
IGIFATRSPIRPNPIALTAVQIINIDHENGIIKIPYIDANDNSPVIDLKPYTPSVDRVENPSVPKWCSHW
PKSVEKSGEFNWEDEIEF
>gi|260686609|ref|YP_003217742.1| putative peptidase [Clostridium difficile R20291]
MCFMLNIRTLCHEINDWIINIRRDLHKTPELGLEEFQTKKKIIKYLNEIGINYIEYKNHTGITAYINVSP
NFETVAIRADIDALPITEELNYSYKSINIGKMHACGHDAHTAILLGTCNILFKLKNYLNVNVKFFFQPAE
ETIGGAQLMIEDGCLENPNVKYIFGLHVNPNINKNLIELKYNTLNASTDTLQLTVHGSKCHGAYPHQGID
AIVISAHIITALQTIVSRNTNPTDSVVISLGKIEGGIKENIVCDKVVIRGTLRTLTPETREFSKKRIREI
CDFTCKTFGGSISVEIEEGYPALINSNHLVDYVKQNAVELFGEENIILKDSPTLGAEDFSYFLRHCEGAF
YHLGCANREKNITSPLHTSTFDIDEDCLITGVMLHVKNVLSF
>gi|260686610|ref|YP_003217743.1| putative muramoyltetrapeptide carboxypeptidase [Clostridium difficile R20291]
MLGIIAPSGPLRNTSLEEIKFNLESYGYEVKFSESCSLNYKGYLAGNDDIRARDIEDMFLDKDVDIIMCL
RGGYGTTRILDKINYDIIKQNPKPFIGFSDITGLNLAFYKNCGLLPYHGIMAANVGKWDKFTYKSLVNAL
EFKDDLYLENPKEEKIYTVCEGKAEGIIMGGNLSLIIATMGTKYEIDAKDKILFIEEIGEPQYKLDRMLT
QLYSSGKLEECNGIIFGDFKDCIEENDLMELLIEFANKVNKPSIYNLQSGHCIPMITIPLGRMCELDATE
KIVKLKK
>gi|260686611|ref|YP_003217744.1| hypothetical protein CDR20291_1246 [Clostridium difficile R20291]
MSDDRIIDFNELKNKVKDSDVDKFEQYIYNLYFSVMDGKMSMAEFSRKIFDYMRDNNISQEKFMKIQKQF
MERYGMDTEEVEKQLRNFGIDPSTAGFMSNNTSSKVSTEDLESFKKSAGFYEKYGEKIQPKSCITTFIKN
DLNDINVIIDQEKIMLCSDRKINLMDSELNEFLLEYKNMFNKKIKVVMCETTNKYDY
>gi|260686612|ref|YP_003217745.1| hypothetical protein CDR20291_1247 [Clostridium difficile R20291]
MDNLLNELEALKSNLDNLPIEKIENYDLSKTALFIIDVNNGFARQGALYSPRVESLIKPIEMFTKKISNK
LNRVIAFTDSHTPKSIELLSYPVHCLENDVESELVDELKSIENLQILPKNSTNGFFALENLDFDNIDNII
IVGDCTDICIYQFAITLKSYFNQHNIEKNIVVPMNLVDTYDIPNIHPAEILNLVFFNSMIQNGVNVLKEI
R
>gi|260686613|ref|YP_003217746.1| glycerophosphoryl diester phosphodiesterase [Clostridium difficile R20291]
MNIYAHRGFSGKYPENTILAFKKCLYMDIYGIELDVHRTKDGKIVVIHDEKVDRTFNGHGFVKDFTLRKL
KTLNSSFEGYQNNKECKIPTLEEVLILISPTDLILNIELKTDKINYPNIEKDVLELILKYNMKNRVLISS
FNSNSLKNFHKLDPSVKTGLLCYLPINNVVNFAKFLGNSYLHPPLVLVNESLIELCHKNLLGVNVYTVNE
EDDILHCLKLNVDGIFTNYPDIASNLLHSKQYS
>gi|260686614|ref|YP_003217747.1| putative nonribosomal peptide synthetase [Clostridium difficile R20291]
MYEVNLERAMNYWMDLLDDYTNIAKIPNDFFYKDCSDEVVDEVFKMNIEKHERLIQYSKVNNISIDSIIE
TIYGLILQKYIYEDDVVFGKTMNIIPIRVRVRQSEKFIDVVRKLKRQWSRSLEYGYYLLSDIENKNHLNT
KLINTIFIAKSFDLSYDYDIEKKGYDLSVIVYTKRALKIKIKYKPSIYKRETIRRILNQFDYIIEQIIED
NDILIEDLEFVCKEEEKVLLEDFNNNQYEVPYDKSYVDLFREQVKVTPSNIAARDENRKLTYKELDEVTD
KLAGYLNHIGVESEDIVAVMLPRDINIIITAIGIMKSGGAFFPIDTSNPEERLNYLLEDSNAKVVITTDE
LKSKVVNENTIVLDINDEEMFKLGYELTEKITSSNCAYTISTSGSTGRPKTIAIEHKSLVNMCYYSVKSI
SATENDICGIYLSFSFDAVMKQLFPYLLVGASIDIMPEEAKFDEYTVNEYCEENDITILALPTAFARLFI
QNCNNNSLRVVQTGGERLKGYRKRNYELYNEYGPTEFTVVSTSFHVDREYGKIPIGKPIFNTYAYVLDKK
NKLCPIGAPGELCLSGIQISRGYLNKKGLTEQVFVENPYKTCEYNKLMYRTGDLVRWLDDGNLDYIGRMD
NQVKIDEFRIELYEIENIINNITEIKSVVCISRTNDDGDMYICAYYVIDEEDSGKINERTIREYLNEHLP
PYMIPTIIMRIDKIPVTPIGKVNKKALPE
>gi|260686615|ref|YP_003217748.1| putative oligopeptide transporter [Clostridium difficile R20291]
MYICYNIYKLKRGENFMNKKLPKGAYGEVSGKDYVPYITDKSRTGGNVAVLIIGIILAAIFAASTTYSGM
KAGLTVAAGIPGAIIGSAFVGAFARSKGILGKNLIQGMSSGGESVASGFIFVLPAVILIGSQITFFEGLA
VGVGGVLFGIGIAAIVHNYLIVEEHGKLMYPESMAISETLVASEAGGDSIKYMGIGFVISGFITVLTGSF
LNVANNVMSLVGSKFYKWKFDIEVNPLLLGIGFIVGLEVSLTMFAGSILSNFGIAPLIGYFTDMAKDGAM
VWNNPAMPLNQMDVGAISSSYVKYIGAGMMLCGGIIGAIKLIPTIIASIKETLKAKSSAGEGEEGSSIQM
ILLLGGVVIGFLAAFLISGNIVMAIIGAIISLLLSLLFVIVAGRLTGTIGTSNLPVSGMTIASLVIVTLV
FVIMGWTDLEANKSLLLFGSFIVVAIAIAGGYTQSQKVTYIIGGSKNEMQRYFTIASIVGVIVVVGVILL
LSDQLRATGDNVQFALPQANLMSTLTSGIMSGSLPWVMIIVGVFMAIVLYALNLPIMTIAIGFYLPIATT
SIILVGALIRLFVELVSKTEKEKEVKVSNGISLSSGLVAGGSIIGLIGIILQVTGVVTPKVPSGFAATNS
MAIALLVVLVVLTTLPIVLSKVKNNEQE
>gi|260686616|ref|YP_003217749.1| hypothetical protein CDR20291_1251 [Clostridium difficile R20291]
MSKSNDVLDIVFKITDGLEYEVAENSVVTILEKQDHKIQKFFRKLKARIPKYKKIELDEYSSFVFLQIDG
QRTVREIGKNLEAKYGEESHPLYERLLVFLNHIEVNCHYIERLDI
>gi|260686617|ref|YP_003217750.1| ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MNLMTLENISKSYSEKKLLENISLGINEGEKIGLIGVNGTGKSTLLKIIAGVEESETGNITKTNGIRIEY
LPQNPTYNENSTVLEQVFNGTSEELKLLGEYQEILEKLNSNFTEELNKKLLSVHEKIDALNLWDLESEAK
SVLTKLGINDFNQKIAELSGGQRKRVSLASALITPCEFLILDEPTNHLDNDTIDWLEEYLNSRKGSLLMI
THDRYFLDRVTNRIIELDKGRLFSYDGNYSIFLEKKMERLSLEASIEDKRQNLIRTELAWVKRGAQARST
KQKARLQRFDELMNRDSFKPDENLDISVASSRLGNKIIEIHNISKSFEENTVIDNLEYTLTRTDRIGIIG
KNGMGKSTLINILNGEIEPDSGYISIGETVKIGCFSQDDSHMNIDMRAIDYVKEASDYIETSDGTRITAS
QMCERFLFNGTMQYTLIGKLSGGERRRLHLLKILMTAPNVLLLDEPTNDLDIETLKILEEYLDEFKGVVV
TVSHDRYFLDRICNKIFAYEGNGKIHIYTGNYSDYLIYREIQGIEFEESKRESVKKDDSTTLKKEKPKND
KKLKFSYNEQREFENIDSDIEKLESKIATLDESTAKFSTDFTKLQEILDEKSKLEKELEYKYERWEYLNN
LADEIANNK
>gi|260686618|ref|YP_003217751.1| hypothetical protein CDR20291_1253 [Clostridium difficile R20291]
MNLILGDNMSKKSKRRKINKLKLTIVITVLFLALLSIYEILFSNPNKKGNIKSQETMQNKNNTTDDSKNN
QSSTKKQEDNNIKPTFSYSSIPDNIKNKMIGKSMPTDEPISFDSLSYLKLTYYGFDEKTHQGEMIVNSEL
APEVVDIFKELYEKKYPIEKIKLIDDYDAVDEKSMSDNNTSSFCYRTIAGTNVVSNHGKGRAIDINPLQN
PQVSGNDVTPKISTVYADRSSTKFGMIKKGDDCYNAFVSRGWSWGGYWKNPDYQHFEK
>gi|260686619|ref|YP_003217752.1| GntR-family transcriptional regulator [Clostridium difficile R20291]
MIFSNLKLNDNEPIYIQLKNYISDMISKGLIPDNSKLPSTRELSQLLQVSRNSVVLTYEELKSEGLIYSI
SGKGTFVKSKNKSSNTTWSLNWDCLENTYSKKANELDIIKSEIPWSSDLISFKSISPDGDLFDMEELKKS
FLNRISLEGHKLLNYGYAQGYKPLIDYLLEYMTNKGADISNKDILITNGFTEGFDIIMSSFTQEKDYIIC
ENPTHNTAIKIMKSHNLNILGVDINEDGLDFNMLEDNLVKYKNKIKFAYITPSYHNPTGIVMTPENRYKF
YNLMKKYNIAIIEDGFNEELLYNSSHIFPICSLDNMNNGVVYIGSFSKILFPGMRIGWIFADKKVINKLE
SVKRCRNIHVSFLDQGILFDYLSNGGFEKYIKKIRKFYGDKFNFAYKCIKKYIKTEYILGDGGLHIFIKL
KNIDTRVLLEKCYEKNVIFMPGDLFFTDNSGFDTLRLGFSRLSFEDIEIGIKIIGETINEMF
>gi|260686620|ref|YP_003217753.1| D-alanine--D-alanine ligase B [Clostridium difficile R20291]
MKIAVIMGGISSEREVSLNSGKEIYNNLDKNKYEVVKVIIDDKKDIFTKIPEDIDFAILALHGKFGEDGC
IQSILETMDIPYSGCGPLCSGMCMDKNITKKMLRDSNLPTAPWVLVKSVDEIDYDEIDNIGYPVFIKPNS
GGSSVATFFIHSKDEVEEAVRKGLEVDEFVMIEKYIPGGEYTSFILNGEVFPTISIKSDSGFFDYEAKYS
VEKGAKEEVVYLDEELQKRVNEISETCWKIFNCKAYVRVDMIISEGIPYVLELNTLPGMTQTSLIPRSAA
ARGIKYSELLDKLIEYSLN
>gi|260686621|ref|YP_003217754.1| putative competence protein [Clostridium difficile R20291]
MKAEIISVGTEILLGDIVNTNSQFLAKELASLGIEVYHQSTVGDNKQRLLECFDESLKRSDFVITTGGLG
PTGDDMTKETAAEYFGQKLELHKPSLEVLESFFVKTGKKMAENNMKQVYFPKDAIVLKNNNGTAPGAILK
KDGKFIIVLPGPPREMKAMFNESVKPYLQQFTNEMLVSKTLRLYGIGESNLELEILDIINEQTNPTVALY
AKELEVTIRITAKAENEREAFKLIKPVEEKIKSRVGKYVYTEGDISISEGETALEDAVSKLLVEKNLTIA
VAESCTGGLVSSSLINYPGISSVFLEGCVTYSNDSKMKRLGVKRETLEEFGAVSEQTAIEMAEGVAKGLK
ANIGISTTGVAGPGGGTKEKPVGLVYTAIYINGKTIVKKNIFNGDRRKIRLRATRDLLNELRIQLEKL
>gi|260686622|ref|YP_003217755.1| putative hydrolase [Clostridium difficile R20291]
MIKHIFCDLDGTLYENGTITKEDIVAIEEIEKKGVQFNVATGRIFKQAHNIIKDSLDMNGYYVCENGSFI
YDKDYNVIFKRTIDDNLVKKVIDRFESSDAQLYFKYKGDVIVGSDTTAFRHYSSDFIVDPDFEKRSSFDN
LIGNIGVCSENLEELSRIELYLKSEFSEVLEIYFSGTYTLNIVPKSVSKRGSIEHVIKTLNVSPDEVATI
GDSPNDICMLEGFKYSFAMSKAREDVKQSANYVVDSVKSAIDVIMEINS
>gi|260686623|ref|YP_003217756.1| hypothetical protein CDR20291_1258 [Clostridium difficile R20291]
MLMNTHFIMAKSILDNIDENKTFFISEKNFIYGNIKPDAFSKYKLKKHYLDESFNMIVSKINYLCSLNID
SLSKYFSVSRLSQELGVICHFLCDFFCVAHSERWEFKHSLNKHVTYERELGAFAKDVDLSKIKCGTINSS
FEKFFTKLYSDYKKKTDYMNDLKFSAYTCNSVINYILDSILSNTIKSYHIANCG
>gi|260686624|ref|YP_003217757.1| sigma-54 dependent regulatory protein [Clostridium difficile R20291]
MNLDLEFYQKILEASHDEICVSDDKGIIIYCNKAFEENYGLKKEDILGKNVSFLEDSGYSTKSPIPIVLK
TKTKFSLEQDTQTGKKLIITATPIFDENGNLEFTVENCRDITELNNIKNKLEDTKKQVKKYKSEVETLYR
TALRIEDTVIMDGIVMRPIINTVNHVSKTDVSVLLLGESGTGKSSLARYIHHNSNRSNGPFITINCATIS
PQLLESELFGYTSGAFTGASTKGKVGLVELANGGTLFLDEIGDIPQNLQAKFLQLIQDRTFTPVGSLKNK
KVDIRIISATNADLVSKVKEKKFREDLYYRLNVIEIKLPPLRERRDNLVEIIKYYFNRYSSDFNLNKTIS
KEAMDAIANYRFPGNIRELQNIIQKILLTCTDNHITIDDLPNILTKNIHITNNGNKTHISQINKVIISDS
KSTNYKNKNFDTLIKEYEKNIILDAYEKFGSSYKVAKHLEISQSKANRLIRKYTNT
>gi|260686625|ref|YP_003217758.1| hypothetical protein CDR20291_1260 [Clostridium difficile R20291]
MGEKSKGYVFIAIAGLLWATLGLFGKFLMGNGLTSEQVAFTRLFFGFIVLGVYSSIRTPQILKISKKGII
YSVIIGIICQAMFNLCYFKAIDIAGVSIAAVLLYTSPLFLAIFSKVCYKENITRSKLFSLILCFIGAIMA
VTGGRLDFQGLNAFGLLLGVLSAIAYALMPTISKNALKEFSSSTILVYSFLFGAIFMIPSSRPWEILNYA
KDLDVLSCMLMLGIVPAALAYIFYAAGISKGVELSVAGVVASVELVGSVIIGCTILGESFSLGKLFGVML
MLISAVVALNLSYDEIRIFYKSNKLKQIEKTESI
>gi|260686626|ref|YP_003217759.1| putative radical SAM-superfamily protein [Clostridium difficile R20291]
MIFLDKFKYAFDDKRYHTWNYYLRNTFGEKVFKVSINAGFTCPNIDGSLGYGGCTYCSKEGSGDFAGNPK
DNLISQFYNIKEMMLKKWPHAKYIGYFQAYTNTYAPLEVLKEKYETILELEDVIGLSISTRPDCLPDDVV
EYLSELNKRTNLWVELGLQTIHDSTSKIINRGHDYKTFVEGVEKLKSKNIKVVVHIINGLPGEDYNMMME
TAKAVGKMGVDGIKIHLLHVIKDTPMEKMLQNGMLTLMEQDEYINLVCDQLEILPETMIIHRLTGDGKRD
ELVGPIWSLKKWEILNQIDDTLKARNSYQGCKFV
>gi|260686627|ref|YP_003217760.1| hypothetical protein CDR20291_1262 [Clostridium difficile R20291]
MNFCYNCSIDFGGDFMYTNFNIDFNNFNKKENATKFMLMGVLLIILGLLCLTFKTLGIKLISWTFGIALL
FFAYLNLKNINELKRYATKEEIKPSINIQWVLIIACILLFVFPQKIQSIFSLFLGFYLIFNQLVALVNSK
NNPYSKFTTWNIVKILFGICLILSPLFLSRFIVSIMSFFIILFGLVLFFSGNTARKY
>gi|260686628|ref|YP_003217761.1| hypothetical protein CDR20291_1263 [Clostridium difficile R20291]
MTKLWAIIFALLAGGSTALEAFINGELGKSTTALVATFISLTVGAIFFLASIIVTGDLKCLVSINGFNYK
LLLGGVFGGLIIYFTVKAIPNLGVSNTLILTLVSQVLVGFFIDSVILGQETMHLYKYIGVILLILGTFFI
VN
>gi|260686629|ref|YP_003217762.1| putative ATP-binding protein [Clostridium difficile R20291]
MKEVLKLADEKFVMSFSGGKDSILALNRMLKKGYKPVALLTTISEEHGKSWTHNLEYNMLKQVSSNIGLP
LLVAECGVEGYEESFERALIKAKNMGATICAYGDIDIESHRKWDTDRCEAVGMKVDLPLWQESREDLVYE
FIDSGFCSVVTKVNLKHLGEEFLGKKLTRELVEKIKNAGADPCGEHGEYHTFVVDGPIFKKPVEYEVKGT
LIKDGYGYLEIK
>gi|260686630|ref|YP_003217763.1| putative drug/sodium antiporter [Clostridium difficile R20291]
MDTKISINENMSLGKRFFKYLAPSVVAMWVFSLYTMVDGIFVSKGVGELALAAVNISMPFINFIFAVSLL
FSTGASTIIAIYLGKKDIKSANEVFSFNLVSIIILSIIILAITFFNLDRLALFLGATESTIGMVKDYLGI
IIFFNGFFIVSYSLEVIIKTDGFPILATVGVIISALTNIILDYLFVIEFGWGVKGAGIATVLSQVFSTIF
FLIHFLRKNSTLNFSKFRIDFKTLRKIVFIGFPDSTTELSCGIVVLLFNLSLTKYIGENALIYYSVINYI
NTLVLMTMMGITQGMQPLTSFYYGAGNIDNVKKLLKMGIKATIIASVAVFAICMAFSGPIVSLFIHPEET
MLFNEGVRVFKIFSISFLLVGINVIISGFFVSVEKPSISTVISLGRGLVIVVLSLISMILIFGGQGIWMT
TIVSEFICLILSLVFLKKNFSTLDSNLNKVA
>gi|260686631|ref|YP_003217764.1| putative signaling protein [Clostridium difficile R20291]
MSILLKKAPKLAKHIITSFYINRDINEVLKYLCENVTWIGPGEQEFLTSFNEIKNYFYAGQDEIPSCDIN
NDVFETVSEDENRCMVLGRYTVRTKENAQMILEVNQRCTFEIIEDRGKLLVKHMHISNPYGEMQLDEYFP
TKIGTQSYDYLQRLLKEKTEVIEMITNNINGGLKGSNDDSTYSFFYVNEGLPKILGYTYDEFMEMSGGSA
VGAVYPPDLPKALEDCERCFAKGPTYSSEYRIRKKDGTLMWVLDSGMKSLNSDGIVKINSIITDITQLKN
IESELKLERERYRIALQNITDIMFEYDIENDTLIKYQRVEIDKKIELENFETKNYSKLLESGKIIHLDDI
GKLLEVLHGNLRETIEIRQVNSLTKNEWRWIRVQCSVIYDSDHNPIKTIGVLKDITEDKSKLESLINQAQ
RDPLTQLYNQRVSQNLIEEYLCSSDSKNNDALLVIDIDDFKTVNDTFGHLEGNEVLVAVSKILLHNTHDK
DIVARIGGDEFTIFIKSLTKDLIIKITNDILNDASKIKVKDNHKITLSIGIAFTDDSTKLYKDLFSKADK
ALYLSKADGKNCYSTYE
>gi|260686632|ref|YP_003217765.1| putative signaling protein [Clostridium difficile R20291]
MFKEIFLRTFPGFLIIRDSNYRIIFINDNLKNLIKSYMQDNPLGMTNIEIAKKLPDNIAKFFTDSHNIQL
DWEKNYPYDKISNWILEFKKDTTSYWNVLEYKVDVDEKTYIITMANDITKLYEENKRNLHYSITDPLTGA
YNRKYLNDRFDIFIGDYIVLIDLDNFKMINDYEGHNVGDKILCDFVSLLNKELINSTSIIRLGGDEFIVI
FSSDVDKNYVYSQLEALRENFLKVFSKYKYLSFSYGVDTVKRNLKLTIVELDKKMYKNKEKNKKKFDKND
Y
>gi|260686633|ref|YP_003217766.1| putative signaling protein [Clostridium difficile R20291]
MQNHNYIKMLNKKVEVLSKELDSRNFKLKTLNEIDFFSKIPNREFMYQYIDDCISKNIHIGIMLLNIDNF
KLFNDIYGYLVGENLLITLTQNLLHFIPESKGIVAYLKGEGFLIVLPNVSNKELNNMGATIIESSRELKI
RLPNEKEIYSNVTFSIGSTIWNGEPNMTTLILFNQVYSALKKAKSEGKNRYILFDFKDNSFYNKLENDKE
FLSEISHVLQTKQIEVFYQPLYNIKNNTIVGCEALARWRHPIKGLLTPDKFIPLFEQFGLITELDLHLFE
ENCKNIRRWIDNNDVFVPICCNFSRLHFFNPNFPSMLKGITEKYSVSTSNFSIEITENILIENTNTIIQQ
LAELRSYGFSVSMDDFGSGYSSFGMLQNLPFDIIKIDRIFLSHNLNDFKNTTILYSIINIARALGMLTVC
EGVETEQHVEFIKSINCDIAQGYYYAKPMECKEFEKLLSKENNSEKMFIKYSDIGKSLIEKIFDGFFIMQ
DMKKLRANVTEDIQWFDFYNKTEITSFPKVIEHFEKHIKGKKFSILYKSITPHNTESDSLLISGEAVLSD
EASEHQKYSNFYFSANCIISENKLLLAKLHLDLIKTAGYINEFESYSIPKMTNTHLDESNILSQFYSMLP
VGIIRYDLFGDMIITYMNEEMFDIIGYTKEQFFGEMGGNLRAIVHPDDLDFVYKKSLDMIDTNKIEPFLY
RFIKRDGQIVTVMYTQCNLSAIDGRSIAQGMYVDVNKIKNLTKI
>gi|260686634|ref|YP_003217767.1| MerR-family transcriptional regulator [Clostridium difficile R20291]
MKDYYKIGEISKIYGIGRDSLMYYEEIGILRPVRDINGYRMYNISDIWKLNLIKEFRSLNFPMKKIKEYL
DDRSIESTKNILNEELDLIDKKIAEFISHKENIIKRLSSIESVIQNTKIDEIEVVYIEKRKALELNADIK
RDEDFDFLIQKLQKEYEDRFNILGNNNIGSAFSTEAINKGIFNEFKSVFCFLESNEKVYNIVFDEGYYVT
LNYTGSNSNNKMYMEKVFKFIEENNYKIIADPIEIYKIDIHETGIVEEFVTEIQVPITK
>gi|260686635|ref|YP_003217768.1| hypothetical protein CDR20291_1270 [Clostridium difficile R20291]
MKCSNCGSVNIEKGILTTGGIYAETIGLKYRGDGKLDKVINKTFPVQSTIYSDLCLDCGEIVRTYIKDNT
DRNWCKDKK
>gi|260686636|ref|YP_003217769.1| hypothetical protein CDR20291_1271 [Clostridium difficile R20291]
MFRDEMDKCTHMLTAYISSLYDYCDFIDTQLDDFILEYGENVVESCLHQVMVLVSKYN
>gi|260686637|ref|YP_003217770.1| hypothetical protein CDR20291_1272 [Clostridium difficile R20291]
MNHHILIQFEYIARIITAGFCGALIGYERKNRLKEAGIRTHFIVALASALIIIVSKYGFNDIVGTPGIGL
DPARVAAQVVSGIGFLGAGLIFIRNQSVSGLTTAAGIWATAGTGLAIGSGLYLVGIVSSIIIVIVQITLH
RDRKWMKLPTAEQVSLKISNSTDSIEYIEGKFKKSNIEIINMNIKRLDGDWLEVVIYTKLPKGYKKTNLL
KLFSDNPLIETLEI
>gi|260686638|ref|YP_003217771.1| hypothetical protein CDR20291_1273 [Clostridium difficile R20291]
MSIALILIDIQNDYFKNGKCELFQSEETAENAKKILLFFRKNNLPVIHIQHISTDKTASFFLPNTHGSEI
NKIVFPLDNEEIIIKHTPDSFFETDLQSILEKKNITNLVICGMMSHMCIDTSVRTAKKLRYDITLISDAC
TTKNLSWNNIEINANTVHQVFMASLQNSFADVKNTDKFLSNYHK
>gi|260686639|ref|YP_003217772.1| putative transcriptional regulator [Clostridium difficile R20291]
MKIRAEYTCPLEIVHDIIKGKWKTILIFELRQSNKTFSELQHNIYGINQKMLIQQLKELRDFGIIDKISS
AGYPLHVEYFLTNRGKKMLKAVEIMQEIGIEYMLEHGQQEILDNKGICYNK
>gi|260686640|ref|YP_003217773.1| hypothetical protein CDR20291_1275 [Clostridium difficile R20291]
MNISRKAMKIIELAQKIANKRGISVEEAWSEAVTEYKNKYEHIA
>gi|260686641|ref|YP_003217774.1| hypothetical protein CDR20291_1276 [Clostridium difficile R20291]
MIVKIDNTLEKEFWQYVSHEESLNLFIIGYVENYGFSSQYQDIWSQVEDGNITSIILKNKSTLIIYSFKN
NFDIGEMKNHIKDLDVESISGKKCVIDRLISKYKDFYEKLDNKFCVLKEIKEIDFSNMKEYKIENAQEKD
IDEIGKLLNRSDYKVSKNYIEERKEHLKEGNVRAYFIRNDDTMISTVSTGMETSFLAMVVSVSTDKRYRG
KGLASYMVYNLSKELLLEGKVPCLFYNNDVAGKIYHNIGYKEINEWTILFK
>gi|260686642|ref|YP_003217775.1| hypothetical protein CDR20291_1277 [Clostridium difficile R20291]
MHSIKDYSLLLCIIFLGVMTLKTNKISFNKGLYYLNTNANFNFQLNRIIMWDGGRLEDIQKVSSKIVDSE
SWKTELMYLAQEAEQDGRTENAIAYYRMSEFFMYDGDPDKISVYKKATTLFYNYYSEYFSNGTVQIFHVP
YENITLPVMYAKAQGEVKDVILLHGGNDSYFEEFFFPMLYLASQGFDIYLFEGPGQGGVMRLQGKHFTYQ
WERPVKTILDYFHLENITIVGASLGGFLAPRAAAFEKRIERVVAWSVFPNFLDIIVGSQPIKMQNLLRLL
LKLKTKWLVNFIIKQKMKSGDSMVVWGLKHGMYAYEASTPYEYFQKIKYYQIDSIAKNINQDILILGATQ
DHFIDYRTVGKEIDLLNNVRSLTFRLMTEAEQASNHCNCGNSKLVLDTISNWIMMMKIHDRV
>gi|260686643|ref|YP_003217776.1| transcriptional regulator, arac family protein [Clostridium difficile R20291]
MNKELTAMTTICVMIDHIFLDTEYRQPTIHKHLAKHIIISQSGNLSVTFDKGESLQCKGIIIDSNVSHTV
SSKDNKMLVFLIDDTSILAQNISQHQLLNHSFFVIDNLIVERIQNIYTACQVKGLSQSYIDFSKQAFRLL
NLNYHISSITDSRIQWALNHILKSTHIHNEIFFEICAEVKLSKSRFSHLFKEQMGVSLNSYLALSKLRKA
YELLLKSGDITSAAMDAGFSSPSHFSASSKKYLGITASELIGKCKIYFIRQ
>gi|260686644|ref|YP_003217777.1| putative exported polysaccharide deacetylase [Clostridium difficile R20291]
MKKDSLKKYIMIGAFALILFGIASINFKSLDKTKTQISSPTLDTHEYDWYFNPREDGKQPSPIKEADFFK
KYGAYYVGNPNEKVIYLSFDAGYESGNTPKLLDTLKKHNAKAQFFVVESYIKSNPELIKRMEKEGHLVCN
HSKSHPSMAGITDFEKFKEEITSVEKAYKDVTGKEMPKYFRPPMGKFSEQSLKYTQDLGYKSIFWSFAYV
DWYEKKQPTHEFAKNKIYSRTHPGAIVLLHPNSSTNTEILDEVLTHWEKEGYKLKTLDYLNNKK
>gi|260686645|ref|YP_003217778.1| putative exonuclease [Clostridium difficile R20291]
MDNIISVLNDVVFLDIEVSGLDCLNSEILEVGAVKVKDWKIYTYESLIKNKFEVPIEVFSVCKNLDKNDL
EIANEIELVEDRLVNFVEDSFIICHDLSLKKKFFEYHMPKLKNKFIDLIELAVILEPYHKDYSLEYLKNT
LTNCNSKVENRALSDAIDIINIVNCLLVKFNNYEKTTLEPLSFKINSYLKKFNLPTWEWSKFLEEANYDL
SNNINIKKEYNIFDSKEEKKKERETLKILNEEEKNYEELLKYKTIWENKEGFTYEYRPGQYELTKTIREL
FRNSEDEEKIACIEAPTGIGKSVGYLLPAILEARINKKRLLISTDTKELQIQLINKDIPNVLDSLGLNGK
VSYGYIKGKNNYICIDRLEAYIDDYESQNPTKGEILSLIFLKRLVEGGKYGDIEEINYLVFDNFKEISTH
LRNVSCDPNMCRPKKCKKDCLYKNRIEELKEEHITVVNHSLLAKWPYKDEKPLENIIVDEAHNLTEKGYD
FFSSIINSKSLRYLLQEIYPYEFIQNSSFIYKKYSRNMRKIKAFDKFYNVLKIGREDKQKIARSINLIIE
EIDSILKFGNCNEYNNVSNYNLRWELNLQIDEIVGKLKKDGIDTEISYRAYSEKIKLSCEKIIKNLVSII
IIIYRNIDDDSIDKEADIYKFGKAKTRDLEDIKIIFEIFLEYDEKDDYARIVEIDKNYNDFEFRVVPLKI
ADLFEENILSQLEKGIFLSATLSLSESMSYFKNTLGIDRVKNVEKIIEPIFDYKNRVSVVGFSDICEYRN
SEFPNEMSKIISNISKITEGHTLALFNSKDRQEKTYEILKKYLHSFNLEIYADKKGIRHLNDLNRKCVVL
GSKGCFEGVDIPGDGLVCVTLDKLPNLNPKDPLYFTIMKKYGIDYYTINYPQMTIKVKQAMGRILRSKYD
YGCFVIFDVGTNISVLKRLEKDLHDCKISKVNSNEFYTYIRRHLNKSRSLILKSVIFDTIKALNVDAKMD
NNDVDKDIIKKDINENIRQRAVKGEVYHIDIIKKDMKVKYFDRNYLINLDIFMREEDKN
>gi|260686646|ref|YP_003217779.1| putative ribonuclease [Clostridium difficile R20291]
MGVRYLAKQKFYAVKKGKNIGVYNTWDECKKQVNGFSGAEYKSFSTFQEAKEYIDGSEKLSFQEDKEFIE
AYVDGSYEHSVKMYGSGVVILKNNEVIKTYSEKGKEKTLVSMRNVAGEIEASKIAMQYCIDNNVQNLILY
FDYEGIEKWCTGVWKTNKEGTIAYKNFYDSIKNKLNVKFTKVKAHSGNKYNEEADKLAKKAIGV
>gi|260686647|ref|YP_003217780.1| putative bifunctional protein: peroxiredoxin/chitinase [Clostridium difficile R20291]
MPNLPSLGSKAPDFKANTTNGPIRLSDYKGNWIVLFSHPGDFTPVCTTEFLCFAKYYDEFKKRNTELIGL
SVDSNSSHLAWMYNISLLTGVEIPFPIIEDRDMRIAKLYGMISKPMSDTSTVRSVFIIDNNQILRTILYY
PLTTGRNIPEILRIVDALQTSDRDNIVTPANWFPGMPVILPYPKNYKELKNRVNSCNKKYSCMDWYLCFV
PDNYNDEEVSKKIDNTCSWKKEHTKNIENECNCEHEHHDYLNKALDCKQEHKTDIKDDCNHEKKHTKNTN
KVHNSKQDKFKDKSCDEMNFNYDKDESCDKINSSYNKEDSSYEDFYKHNYKNYDYTSEKNTKKIAMKTLK
DSKKLVRPQITDPYNPIVENANCPDINPIVAEYVLGNPTNVDAQLLDAVIFAFAEIDQSGNLFIPYPRFL
NQLLALKGEKPSLKVIVAIGGWGAEGFSDAALTPTSRYNFARQVNQMINEYALDGIDIDWEYPGSSASGI
TSRPQDRENFTLLLTAIRDVIGDDKWLSVAGTGDRGYINSSAEIDKIAPIIDYFNLMSYDFTAGETGPNG
RKHQANLFDSDLSLPGYSVDAMVRNLENAGMPSEKILLGIPFYGRLGATITRTYDELRRDYINKNGYEYR
FDNTAQVPYLVKDGDFAMSYDDALSIFLKTQYVLRNCLGGVFSWTSTYDQANILARTMSIGINDPEVLKE
ELEGIYGQF
>gi|260686648|ref|YP_003217781.1| hypothetical protein CDR20291_1283 [Clostridium difficile R20291]
MIGLKKILRILVISMMICFAMTFALVLINSVMGVHIGLDYYFLMGSVLTVCLTIGIVLCNARKIFDSKAI
HKTRTKTVSTNKKQKSHSRDIKRKIS
>gi|260686649|ref|YP_003217782.1| hypothetical protein CDR20291_1284 [Clostridium difficile R20291]
MNFRDLFEKAVDFIDEKRKSIVAISLSTLGVIALIIVFFLSSNEFSVGNEANELLKIIEKRQYSIAVDYY
TSIEKKFSDSKMERFNKSVSKKINKLLLNSGDKYLDGDISQESFIGLINTVKELNKISIDVDDLLAQADR
VREMYKEENTTYDIAINYISTVSILNGMGSNLDVYKQNIETIKESRDVYDSAVKDQKAYKYYEAIEKYNK
VLKEDEKYYSMAQNGKEQCIEEMYDYYISRAEEANTSGDYERALQYIEYLKEDYSDDEKVQSLEKKYKKN
LSLYTLTSDDIINVIAKKSGKDKANLSINSLPQMIKNNKYYYAEVYEYDKLINEVLVSAKTKDLYSYKDG
KKDYKVDYGDGYFRILEDGSYQFGITKDKAKFVLTNTLDEKENKYKKIEILDIEKADRYVKSKKSLEELF
GKYKNIYYYAVVNKGLFRGKEVYAINIYNEKIYAISENGLNEY
>gi|260686650|ref|YP_003217783.1| hypothetical protein CDR20291_1285 [Clostridium difficile R20291]
MSNVNKKLVIAIGAVALVAIIFIGIMCMQFKGEKIAKNTYVNGVDIGKLTKSQAKQELAKKYKLENVEFN
YNDKSWKVKSKDLNLSTDLDKTVENAYNLNRKSSFFGNLSKTISTNFGKKSNLVVVINYDKNKLKAEMEK
IAKEIDVDVKDATLDISGEKVKVIPDSDGLKMDISKSMENFDNQTKKGNYKNELVVKATPAKVKKEQLTN
IDTNLGTYSTIFKTSQINRSINIKLATDNISNVLLMPGETFSFNKHTGKRSKENGYKSAPVIMEGEMEED
YGGGVCQVSSTLYNSVLYAGLEIVNVKNHTIPSSYVPKGRDATVADSGIDFLFKNNLKHPVYIKNYVSGN
QIVCNIYGSAEDKQNITISTKLDGVSQTTMKRVNDPTMPKGKEKVDKSGRNAYSVSTYRTFNDANGKKIK
TEKIANSYYPKKEGIILVGTMEPKPEEKPNTDENKNNQNTNNQNPNNQQKPETPPTDNKPNETQPQPQA
>gi|260686651|ref|YP_003217784.1| putative sigma-54-dependent transcriptional regulator () [Clostridium difficile R20291]
MNLNNITNYVQSICENISNVLDVDVTLVTKDLTRIAGTGIFRGKIGETISEKSVYSLVLKDGKSYVINKE
IEENCNKCANRENCKELADICTPVKMGEHILGILGIAAFNEEQKEKILSKDKELTAFVRSMSDLISFKLD
ELYKQEVKTIDDLEREAIENAIKKYGSNTEGMKKVAEALNIGIATLYRKVKKFNIKS
>gi|260686652|ref|YP_003217785.1| putative multiprotein complex assembly protein [Clostridium difficile R20291]
MEVSIILVKDIKQDIESMPRKILDISLIEDNKSDLTFFNIEEEDGDETLKALKQSYVTTNYKEETLLNLQ
GALNSKSDTTSKELKLESYKRYNNALDLAYKNYITSAINMVNKALEINPKDIDILNLRGLLKLLKCDFAK
SFESFYTALCYENNHISRKYVNLISSEDFKTFLGRYNHSIRFINEELNYESIHILENIIEEEPELIEPYV
ILSLLYDKLGNVKKREGYLDKLKELDKDNPVFEKNEEEKEDTSKKEEIRKVKRKKSILPYIIVGCVLIGM
GIYLIQSKKRIENLNNQISSKEEKLSETDKKLGETSKKLEKTNKELNEVKNKEPEREITVADEEDLYYQA
LNLKKNKEYEKAIDNFKSVVSSGKTKKYISESIYQLAITNKLLGNKDEAIKYYKKYINTYTKNDQYYDDS
YYELGMLYYDNGDLKNAQQTFYSLRSEVPDSMYNNSKIKEILSEK
>gi|260686653|ref|YP_003217786.1| hypothetical protein CDR20291_1288 [Clostridium difficile R20291]
MKVFNQLVIILSIWVIGEYISSFIQGIILIPGSIVGMLLLFLLLQFKVLDLSSIENVSGFFLDNMAIFFI
PAGVSLIKSLDLIRENVLVLLLVICLSTLIVMYTTGIIVEKMIKKKEEGQKNV
>gi|260686654|ref|YP_003217787.1| hypothetical protein CDR20291_1289 [Clostridium difficile R20291]
MYNVLQTPVFGIIVTIVFFNLGRYIQRKTSNPICNPLLIAIVGIILFLSISKIPYENYKIGADSLNFFLG
PVTVVLAVPLYKQFELFKKHMFEIIVGIGCGIVISFVSVLIIGKIANSDVSIINSLIPKSITTPMGISLA
NSLNGIESITVVAIIFTGIFGGMVASTVFKLGNINHPVAKGIALGTSAHALGTTKAFELGEIEGAMSGVS
IGVSGTITVILIPIIMNFI
>gi|260686655|ref|YP_003217788.1| hypothetical protein CDR20291_1290 [Clostridium difficile R20291]
MSEVKNTLQKHPVLRYSTMLFGMLMTSIGINGFLRPAHLLSGGATGIATSINYLTNINVGLLTFLINIPI
FILGFIYLEKEFCISSLVNMIVFSLLLGATQEISNIIPIHDILLQSVYGGILSGLGVGVVFRTRSSQGGT
DIIAAILKIKKNIEMKDTALAINGLIVLTGSFLFGLDLALYTLIGLFLNAYSMSFIKDAMNYQKSVMVMS
NEVDLIAEDIMKSLVRGVTFLDAEGAYTHQKKKIIYTIVSSNEIPKIKDIALKYDKKAFISVNDVTEVKG
RGFKAKDL
>gi|260686656|ref|YP_003217789.1| hypothetical protein CDR20291_1291 [Clostridium difficile R20291]
MNLSKEYVNLYDNYLKYINEVNKEIRSIKNMKKRVLKKGDFAPENEVLELEGKTIRDIDDVDTKKPKNKI
YKFSNGDVYVGKFLEGKMEGQGSYTFFVDEGTAMEYIGEFKEDKKNGKGNFVFSNGNEYIGHFEEDMMNG
IGNMLYNSKDEYIGTWKNGKKDGKGIYKWSDGCIYAGEFKGGKMEGYGICYNSKGEVLYEGEWKNNLIHG
KGTYIWEKGKKYIGEFMHGKKHGQGTFYLNNELVYEGTWKFDKPSIFDRTLDEIFSLRL
>gi|260686657|ref|YP_003217790.1| hypothetical protein CDR20291_1292 [Clostridium difficile R20291]
MILRRRDILKRLIALVLVILIVLFYSPELIEEGYDLKEKFFQSEIWNEFLDKININNNSKKDKKEQNQNL
QSNNTEGENLGESDIKNFEKISLGDNLSYVLSSIGKPGRIDISEYGFDWYVYNQYGKEFAMVGLENDEVV
ALYSNSINSCENQDIKLNQDRQTVRTKITPLKYKRKGNTRYIINSENQYDIISKEGKYITIFYDIHEENR
VCSYLIIDKSTEDEFKKLYPDDREELKKCFELEVIDLVNSVRNQRGLNSLRYSEQATLSSRKHSEDMRDN
NFFDHINKKNETPFDRMKREGIVYTSAGENIAAGQINAIYAHEAWMNSEGHRKNILGNYNNIGVGVIFGG
SYKTYYTQNFYK
>gi|260686658|ref|YP_003217791.1| putative exported polysaccharide deacetylase [Clostridium difficile R20291]
MTSWKKKTVYKCLIAVVLFCGIVLISNFSKVSALMMDTNGNVLIKHGSREKKLIAITFDDGPHPKETSQV
LDVLKKYNVKATFFIAGKHAKWYKEPLVRASKEGHEIGNHTFNHPDISNLSSSQIEEEIVKCEDILKEVT
GKKPTLFRPPFGSYREKDLIEIAKKHDYKVVLWTGVDVKDWKNPGANSIADKIINKVKNGDIILLHDYAT
NDTVEALDMFIPKMIEKGFKFVTVSELIK
>gi|260686659|ref|YP_003217792.1| para-aminobenzoate synthase glutamine amidotransferase component II [Clostridium difficile R20291]
MILMIDNYDSFVYNLVQYIEELGEAVVVKRNNEIKISDIEELNPEVIVLSPGPCSPKEAGICIDIVEHFK
GKKPILGICLGHQTIGYVFGGDIIKAQQPVHGKVYSINHTNKGVFRGLKNPLNVTRYHSLIIDSNTVPKE
LEITAITDKGEIMGIRHKKYLIEGVQFHPEAILSEYGHEMLENFITEARERVHM
>gi|260686660|ref|YP_003217793.1| para-aminobenzoate synthase component I [Clostridium difficile R20291]
MIREINTKLNSFEIFTIFRNEHDSFILDSAMDKEKLGRYSFISSQPFKVLKYKDTDENPLEVLKEELHKY
RVVNDTNLPFVGGAVGYLSYDLGNYIENLPRTAVDDIEMPDMYFGFYNHVIVIDHLVQKTYIATPNIDIE
LEEKIIDDIEQRILKEEKKGIDSICYEEKEVTPIRLKSNFTKEEFKNAVQSVREYIRQGDIYQANLTQRF
SGETELTSFELYRDLRRFSPAPFGAFLNFEDTHILSNSPERFIRCVNKRIETRPIKGTRPRGKDKEEDLR
LQQELRNSEKDRAELLMIVDLERNDIGRISKTGSVKVPELFVIEPYANVNHLVSTVVGELKDDKDATDVI
KATFPGGSITGAPKIRAMEIIDELEPTQRNVYTGSIGYIGFNGDMDFNIAIRTIIKNDKKVYFQVGGGMT
WDSDPDEEYQETLDKAKSIMKALRGYYEE
>gi|260686661|ref|YP_003217794.1| putative aminodeoxychorismate lyase [Clostridium difficile R20291]
MKNNVGFDSSLSKFGIGLFETIRVKNGIAVDLDIHIERMLSSINCLDLDINYKKDFLINEIVTYIKKENV
INKALRITVFDEGYNISIRDIPYNQETYEKGFKLAISPIVRGNSLIHRHKTTNYFENIYTKNIANKTGYN
DGIFLNSEGVILECSMSNIFFIKGERVYTPSDRLPILNGIIKKRIIEICDELHIELIENEINISEISSFD
FVFVTNSLMGAIKVTEIDKIKFNKENVVFDKIVKLLE
>gi|260686662|ref|YP_003217795.1| hypothetical protein CDR20291_1297 [Clostridium difficile R20291]
MIGCIYEVYNEEMTKIIENQNTLAVYLVGSSKDVDFTLYDVEINDIDVFVFVKEGEKQERILFKKKGIEF
DVNYFSKDGVKKLLSNREYFFVKEMKDAKVLFDRENISNIIKDISRDIYLEGPSKMSLEEKSFIKQDIGA
KISNLKNKEKFDVFEYHFLTNLYLKDIIIGYFNINDKWVPKDKKLLKVLKKENNELFELASKVSENYDYQ
RLLDVYNYIFKEIETKEVIKLIF
>gi|260686663|ref|YP_003217796.1| putative GTP cyclohydrolase I [Clostridium difficile R20291]
MNKVDKEKIQHAVREILEAIGEDPDREGLIETPNRVARMYEEIFSGLSEEPRDHLKVLFADEKHEELVLV
KDIPFYSCCEHHLVPFFGKAHIAYLPKGGRLTGLSKLARVIDTLAKRPQLQERITKNAADIIMEELQPYG
VLVVVEAEHMCMTMRGVKKPGSKTVTSAVRGIFEKDIASRAEAMSLITMK
>gi|260686664|ref|YP_003217797.1| dihydropteroate synthase [Clostridium difficile R20291]
MSLIVFDYGKRTYIMGILNVTPDSFSDGGDFNNLDIAIQHAKDMVDQGADIIDLGGESTRPGHSYVDSDE
ELRRVIPVIKKLKQELEIPISIDTYKADVAEEALKLGVTMVNDVWGLRKDKNMASVIGKYDAEVCIMHNQ
DGTNYDKDIMESIKDFFKVSIEMAMSCGVKKEKIVLDPGVGFGKDFEQNIEVLRRLNELKDLGYPILLGT
SRKSVIGKVLPVEPKKRLEGTIATTVLGIRDGVDIVRVHDVYENLMAARMTDAIYRK
>gi|260686665|ref|YP_003217798.1| dihydroneopterin aldolase [Clostridium difficile R20291]
MDKILLSNLGFYGYHGVLKEENFLGQKFFVDMELYIDSREAGLSDDINKSVSYAEVYNVVKDITENKQFN
LLEALAENIAEEVLNKFILINGVMVRVRKPEAPVNGIYDYFGVEIRRTRDE
>gi|260686666|ref|YP_003217799.1| 2-amino-4-hydroxy-6-hydroxymethyldihydropteridi ne pyrophosphokinase [Clostridium difficile R20291]
MNKAYLGIGTNMGDRFDNLSRACELLKNSDSIYKVKESSLYETKPWGYTEQADFLNMCVEIETEFEPYEL
LEYCQEIERELHRERIVHWGPRTIDVDILFFNDVASTDERLTIPHPRIQDRAFVLIPLMDLNEELIINEK
TVKEHLNLLSAEEREEVKELVGYERKPI
>gi|260686667|ref|YP_003217800.1| putative chorismate biosynthesis-related protein [includes: phospho-2-dehydro-3-deoxyheptonate aldolase and chorismate mutase] [Clostridium difficile R20291]
MKENLFNNNSKIEINTNNKKITVKKDKLIIAGPCAIESYEQLLETAKFVKSQGANILRGGAYKPRTSPNS
FQGLKKEGLKILKAVKDEVGMAVITELMDVRDIDELYSISDIIQIGSRNMQNFTLLSEVGKQNKPVMLKR
GIASTITEWIGASEYIAIEGNSNIIMCERGIRTYNDYTRNTLDLAAVPIIQKETGLPVVVDPSHATGVRY
LVKPMSLASFACGADGIMVEVHPDPENALSDGAQSLCFNEFEDLMKSINNY
>gi|260686668|ref|YP_003217801.1| DNA primase [Clostridium difficile R20291]
MLTQKITPEGDNMNDIKDIIEEIKARCDIASIISEYMNIKQSGANYKGLCPFHGEKTPSFYINTSKQIYK
CFGCGEGGDVINFVMKMENLDFMDAVKILANKCGIEINTNMNEETRIKIEKSKKFQDIHTEAARFYLSNL
LGSKNLGYEYLRIRGLDDKIIKKFGLGFSLDSWNSLMNTLISKGYKKQDLLDCGLIAKNRDGTNCYDKFR
NRVMFPIFDYRGNIIGFGGRVLDDSLPKYLNSPDTLIFNKKQNLYGLNFARKNLESKTIVLVEGYMDLIS
LYQYGIKNVVATLGTALTEQQGILIKRYADTAIISYDSDEAGIKATLRAIDILTKLGINVKVLDLKDAKD
PDEFVRKYGLSDYKKAMDVSTHYIKYKIDHLKKEFNIQKDEERVKFAKEASKIIKQLTSPVEIDFYTKYL
SNQIDINVESIKREVYGKNYNKPYNNKNQKKIEEKVIEKVEVRQDGKQLVEETLIKIMLEDKKIREIALL
KVEESDFLLKESKEILNYMIKNQELDKITIDKLKSLNISEEYLKELNSISLNSINLENTKEIEGIITNIR
KNSLEEQINSLLREQQELENNNDMKEVDGRVMEIALKIVEINKILKSL
>gi|260686669|ref|YP_003217802.1| RNA polymerase sigma factor (sigma-43) [Clostridium difficile R20291]
MENKSNKKELKKVTAKTLIEKGKKQGSLTLAEIMEAFSETELDKDQVENLYETLGNLGIEITETKNYKAD
IDFSVADDDLSIGHLDEDAEAISHDDSSAIEIETVDLSLPKGISIDDPVRMYLKEIGKIPLLKPHEEVEF
ARRMHEGDEIAKQRLVEANLRLVVSIAKRYVGRGMLFLDLIQEGNLGLIKAVEKFDYTKGYKFSTYATWW
IRQAITRAIADQARTIRIPVHMVETINKLIRVSRQLLQELGRDPKPEEIAKEMEMTEDKVREIMKIAQDP
VSLETPIGEEEDSHLGDFIPDDDAPAPAEAAAYSLLKEQIEDVLGSLNDREQKVLKLRFGLEDGRARTLE
EVGKEFDVTRERIRQIEAKALRKLRHPSRSKKLRDYLD
>gi|260686670|ref|YP_003217803.1| hypothetical protein CDR20291_1305 [Clostridium difficile R20291]
MKGELYLKLTDRLLKIASLVSDGKKIADIGTDHGYIPVYLLKEGKVPFAVLADVNKGPLDNAHKEVIQNN
LLDKVDLRLGSGIEILEIGEVEEVIIAGMGGILISELLEAKKEVAHNVEKLILQPMQAQEELRYYLLNNG
YEILEEVLVREDFRIYEIIVAKYTGKNTIIEDEIYYEVGIKLLENKDSLFNDFIEKKIKTYSSIVNKLEG
KNGEAIDKKRKESEVAIKKLENLIK
>gi|260686671|ref|YP_003217804.1| hypothetical protein CDR20291_1306 [Clostridium difficile R20291]
MLLKSLTRKIEKKYPLNLAEDWDNVGLIVGDFDMDVKKVLVSLEANEDVIDEAISKNIDLIVTHHPFIFG
KINKINSGDLKGRLIQKLIKNDISLYSMHTNFDIAFDGLNDYFMEIMEFGNSKVLDITKSENLYKLAVYV
PHNYSDELRKVLSNSGAGHIGNYSDCTFSIEGEGQFKPLEGSNPFLGSVNDIETVNEVKIETVVPQKLLG
GVISSMLDAHPYEEVAYDLYKLENKGEIFGLGRISKLDKSMTLESLSRKIKEKLNMKHIRVVGNLSTDIT
KVAVVTGAGSEFVKKAKRQGAEVLITGDVKYHEAQDALDIGMCIVDCGHFDTEDIFKNVMKRFLDEFSEI
EVIKSNVYLNPFSTI
>gi|260686672|ref|YP_003217805.1| putative flavoprotein [Clostridium difficile R20291]
MMKVAVIFHSVCGSTYLLAREYKEVLEEMNIEVDIFRVSDEVAKTLPQYYLINYKEYKDEFESINVIKSG
KEILDYDAIFMGSPTYYGNVSGPMKMFMDSFSDIWVGAPLSGKIFGCFATAGSQHGGGELALQAMNIFAQ
HMGMTLLSVPCSVRGGYPAYGILHIAGDNSDIRPNDDAKIGIRDYLKRLNI
>gi|260686673|ref|YP_003217806.1| putative 5-nitroimidazole reductase [Clostridium difficile R20291]
MFKEMRLKKREMTKEDTVEVLKNGEFGTFSTISENGYPYGVAVNYVYFNDSIYFHCARNGHKLDNISKNN
KVSFLVVANESVIPDKFSTTYSSAIVFGKACTVENEEKKNALVEIIKKYSKGFFEEGMKYIEKDMNLTTV
VKIEIDHISGKASRI
>gi|260686674|ref|YP_003217807.1| putative phosphohydrolase [Clostridium difficile R20291]
MEIFIMLSKAEIKYFNECASEILSSEKVQLMRTFPHHGNVSCLEHSLSVAYYSYLLCKKLHLRVDIQSVI
RGALLHDFFLYDWHYKGDRKGLHGFTHPREALKNATLFFQINEKETDIILKHMWPLTVKPPRYKEAFIVC
LLDKFCCLVETLKIHSLLSPYHV
>gi|260686675|ref|YP_003217808.1| hypothetical protein CDR20291_1310 [Clostridium difficile R20291]
MSKIECLFTIFPVLILMYATFYFMPYFVGKKHIYGVSIDQEHKNYNYFIKLDKEFKKLLSLGFIIDFILV
FILVFTFNKLELSYFIGIIGFLLYESILYIHTHKKAKKLKSEIYSKLGHIDVDSKLIVDMDFINKKNKII
KKFKIIYLIPILFTLGMSIFIAFNYNKLPDSIATHWNINGSPDVFIDKSFLNVFKLIGTDFCLMVLLYIT
SIGSIKSRIKIDTNRIEESRVENIKYLNKIGYLFLILMIIMTTQFFTTLLSIKTKLSTAMNITTLLVIIY
LIATYINSPNLKFNSSYSPEEDEKYWIAGIMYNNPNDPSLMVNKRFGIGWTINFGNPLGKILYIAIALLL
IFSLFSLIKSLLL
>gi|260686676|ref|YP_003217809.1| GntR-family transcriptional regulator [Clostridium difficile R20291]
MVLNLDFNSDKSIYVQIKEEITKAIASGELKINESLPSVRSMAENIGVNLHTVNKSYNELKEEGFLNIDR
RKGAIVAQLPMKIDNTTRQKNKLDLELLVAKSYLSGISKEEFLSLSSSLFDKYEVKYYE
>gi|260686677|ref|YP_003217810.1| hypothetical protein CDR20291_1312 [Clostridium difficile R20291]
MLTYLMKRQMHKKDDGMSKPMMITGAVITGVGAYAVYKMVKSHKSNSQMVNTNYYGNSDYDDYKYDEFDY
DCDCRDTKQDYEYEELKKKVKEFNSRRINCENCPHVSQEEMMQYVNSVKDVKEDIDLHEDAKKDNIYKED
EYKKYEEE
>gi|260686678|ref|YP_003217811.1| two-component response regulator [Clostridium difficile R20291]
MKRKEIVMLKLLIVEDDSTISFGIKYALEQEGFSIDISKDLSSGKEMISSNEYSMILLDVTLPDGTGYEL
CKYIRGFSQVPIIFLTACDEEVNIVMGLDIGGDDYITKPFRIRELISRIKAVLRRKGNTSEENKKILKFG
DLSIYTLEARVYKNDKEIFLTSVEYKLLLILIQNKNTVLSRTQILEKLWDVTYDFVNDNTLTVYIKRLRE
KIGDDLCEPIYIETVRGIGYKWIGSENSVSI
>gi|260686679|ref|YP_003217812.1| two-component sensor kinase [Clostridium difficile R20291]
MKIVFLYNPEVKKFLSKYVTLMFIVIIISIGFSIINVSLTKEMVVRNNQAIIGTLSSKYPNLESQIVDII
TQGKSMKNIDYGQKILSKYNYDKSIKINSEPIISKLVLETIKINIILVCIIFILIFVLVVRYFTSIYNDL
SDMTKYVYYSSEGKPFDMKNKNQEGQIGLLKTELLKMTTILNEKVELLKREKIFLNNTISDISHQLKTPM
TSLIMLNDLLYNDVPYEVKIDFLNKIKNQLNRMDWLIKSMLKLSKVEAKVINFKKDKVKFSELIHRAMLS
MKIPMEIKNQKLTIEGNDNVSYIGDIDWSVEALVNIIKNCVEHTPEFGNIIITYKENPLFSELIIKDEGE
GIDKKDIPHVFKRFYRGRSSSKEDSVGIGLAMSKSIIESQNGDIYVNSEKGKGTEFHIIFHKMYDSD
>gi|260686680|ref|YP_003217813.1| ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MEILRVENLTKSYGKNETKVDAIKNVSLSVEKGTFIAITGPSGSGKSTLLHLLGGVDRPTSGKVYINDVD
IYNLKTKDLAIFRRRNIGLIYQFYNLIPVLNVKENILLPAELDNRDIDREYFDDLMKTLGLIDREKHLPN
QLSGGQQQRTSIGRALINRPSIILADEPTGNLDSKNSKEILELLKLSVKKYNQTLIMITHDKNMALQADR
IISIEDGIIKSDEVM
>gi|260686681|ref|YP_003217814.1| ABC transporter, permease protein [Clostridium difficile R20291]
MNLYTSLTIRYLKQNKRRTIVTIIGIILSTALICGIGNIFESFMDYQMRETIKNDGSFHVTFYDVNRKNV
EYVTKSAEIEKHAFTKQLGYSKLENSENAILSIKQYDQNAINGYKVSIKEGRFPAKEGEIVLSESIINLI
DDKLKIGDKITLKVGDMFDSSKKKIDSMTFHEGDYIANEKDRTFKVVGIIKKPGFERYNGIATAIAYFNP
MNNYNDTINVSVAVRNPKDVYKISNKISKNIYSNKDKEAVSDMIKYNEHLLRLQGASKYSNINSSIKSII
IAVTILVIICTIATVYNSFSISINERKKQFGILNSIGATSSQIKRLVFIEGIIISLIGIPIGLISGTVAI
DLLFKIINKYFTESVVTKMSLQIVYNPIIIIVSIIIVLLTIFISILLPAISASNISPLNVIKNTGEYKVG
KIKSSRLIKMIFKTEGVLAYKNIRRNRKKFIITLFSLMVSIIIFISFSGFTLLLLRGEEIRNSQRKYDLY
LTAKNTARSVEDTISELEDIDGIKNFELATGQYVSIRVSENKINKSKEDLIRKYYQKYKIGESYEYDFSN
NELIFPGDFAVKNKINNLVQGSFNKERAIEENGVILVRKSAIEENGKKGVVELTNYKVGDTVNCEYLDEN
ALSKKVKVKILAITDEERLGFGYQNMGLQFITYDEVAKNLNLKLSKSLIFIDSGGSIKTKKEIEALANKN
DFNFYDEISSSESEKQDLKVIKIFVYGFIVVISLVSVTNILNTVSTSINLRKRELAVIQSIGVTPKGFRK
MIYLESFIYGILSLLFGIPISIGIILIMNKLISGVIEFSPIIPWTAIVICIVSVFIITFIAGYIPMSKLN
KENIIDNIRRESI
>gi|260686682|ref|YP_003217815.1| putative iron-sulfur protein [Clostridium difficile R20291]
MITISHITAKNMYKSLEERINKFPQGAPPSDTLYKILNVLYTEQEAKLVAQLPIKPFRVKTAAKIWSVSE
SEAYRVLDKLASKALILDIEDNKGKKYIMPPPMAGFFEFAMMRTRHDIDQKLLAELYYQYMNVEEDFIKD
LFYSTETKLGRVYVQEEVLTNDNEVSILDYERATHIIDESTHIGISMCYCRHRMQHVGKACDAPMDICMT
FDNVANSLINNKFARRVDKIECKELLHQAYEHNLVQCGENVRKGVTFICNCCGCCCEAMVAAKRFGNLHP
VQTTSFIPNINHENCVKCGKCITACPIDAISKVKEDGKEYIKIDEDRCLGCGVCVRNCHKNSIMLLKRDE
KIITPANSVHRAVLMAIEKGQLQNLIFDNNALASHRAMGAILSAILKLEPAKKILASKQLKSVYLDKLLS
MNDK
>gi|260686683|ref|YP_003217816.1| cell surface protein (putative penicillin-binding protein) [Clostridium difficile R20291]
MFKQRISKLLSSTLVLSMLFTAAPNITFADNTKDNSEKYQSSDIELHDYSKNAESYTKTKALAKEKIQTL
LSKYGAVSAQYALIDNGKIEISGNGGVYSKQDNKNLNKDNMYSIASISKMFTTTAVMKLVDDGKLNLDTP
VVKYIPEFKMADDRYKEITPRMLLNHSSGLMGSSFKNTILLADNDSYGHDNFLKELQKQRLKAKPGAFSV
YCNDGFTLAEILVERVSGMSFTNFLDKYINNPLNLQNTKTTENSFDSSKLAKAYVPYWEDAVPQDNLNAI
GAGGLYSSAENLCTFAQTFMKNSNGILSPASVKAMENKEYLNGLWPEGEDSILGYGLGWDCVNTYPFNQY
NLKALTKGGDSLLFHSNLIVLPDENMAVAVLSSGGSSQLNEIIGQEILLSALKEKGKIKEIKPDKTFSKP
QQVKMPSSLKENSGLYASSNMIKVDVNDNGTLTVSSPYIENGPEDKYVYIGQDRFVSEKGNSCLKFVKEK
NNITYLNMSSYDDVPGLGQTASLYYVAQKVDDNNISNSVKEVWKKRSGKGYYLVDEKYTSQSYMFGSVKA
SFSLSDETPGYIVNTKIMDENNSNAFIEIPGVIGRDLSDIKLHKENGTEYLSFGTLTYVSEDSITNLPAE
KSFTCELESNGYAKWYKIGDDIANKKIEVNLPQNSAFAVYDDKGVPVNYSLVTKNNRVRLPKGGVIVFLG
SPNARFEVTYQDEVNASALTGTDRYETSIKISQAGWENAENAVLINDSAIADALAATPFAYKKNAPILLT
GSSQINEKTLAELKRLKVKNVYVVGGEASINEKSLDTIKSNNISVSRISGSDRYQTSMNIAKELNNISNI
SKISVVNGEKGLADAVSIGAVSAQNDMPIILTNENSNITEINNLFKNKKIDKSYVIGGEYTVSKNIESKL
QNPQRISGNTRNETNAKVIKEFYKDSKIDNLYVAKNGMNKQDDLIDGLSVGVLAGKTKSPVMLVGNSLDY
NQKELFKTMRFKSVTQIGGNGNENSFKQIKEIA
>gi|260686684|ref|YP_003217817.1| putative phage shock protein [Clostridium difficile R20291]
MYKNINKKQLKEMMKNEKDVLLLDVRTKDEFKEYKIENAINISLQDLINNIDEIYDYKDKKVVVYCRSGH
RSVTACNLLAEEGFEHLYNLNSGIIDYMS
>gi|260686685|ref|YP_003217818.1| putative membrane protein (putative phage infection protein) [Clostridium difficile R20291]
MRHLKKTNSLKEILNWNNIKNLRPSKGLKNILEIFKSDLKDIRGNYAVLVIVLGLAFLPSLYAWFNIKAS
WDPYGSTANMLVAVTNEDKGNEIAGQKINVGDQLIEQLKDNKSLGWQFVDEKTALEGVKKGTYYASLKIP
KNFTKDLTSLITDDVKKGEIIYTVNEKINAVAPKITDKGASTIQLQVNQTIVKTVSEIVLGISNGVGAGI
EHSLPKLTKVENSLIDLQKRFDHINKTVDLASDATSKLSDTVKDIKSDLPTIKKTLNDTKLLSSDLKKFL
EDTNDNLDELSPLIKSDLNLMVDLSSSASSLTLNLIDAVNSGSEDVPKLIDNLSEKLSNLQSLNDTLVDF
LTKLNQLTSNNRLDDVIDNLEDSSNKIDSSISTLNDIKNKVISGQQPSISALNNVLSLSNGIGRINLNIL
NNFDSKISKPINSIFANSIKVANDIITVLDKAEAKLPKVEEILTTSLKLSGNAQESISLIRERLPLAKGM
LDDLIDTLSKISNGEDMKKLVSLLESDILTKSNFLKEPVEVKTEKLYPIENYGSAMTPFYSVLSTWVGIL
LISALLSTSVHGNYKPYEIYFGRGLTFLSIALVQGFIIGTGDILLLGVTAKHPILLIVLLMFTSMVFNFI
VYSLVSVFGNVGKAIAIVLLVVQIGSSGGTFPIQVTPTFFQRINPIMPFTYAIGATREAVGGIYAPNLTK
DILVLLLFMILSICLNVLLKGPINRVIKPFNDKFGDSNLTGH
>gi|260686686|ref|YP_003217819.1| ABC transporter, ATP-binding/permease protein [Clostridium difficile R20291]
MKYFKKYIKKYIVLFLTAVFFLTLEAFCDLAQPTIMAKIIDIGVSNKNLDYILSTGAIMIGITFLGAIFA
IIRSVISARVSQHFSYDLRQDVFEKINTYSLKQIDKFGRASLITRITNDINQMQQFVNGMMRVFIKSPIM
CIGSLIIAIKLNLKMSIIILIAVLIIFIIILLNMKIGYRLFKNVQESTDKVNSKLRQFLSGIKVVKLFCR
YDYENQSFEELNDELFKNSRKATTMMSFFRPTITIIINVSIIIILLIGRHLIYSGEIKIGIIVAYVNYMT
RILTSLIMISHVFNVFVRAKASYERISEVLVDENEEVIEREESLDVGEKDLKFVNCDIIFENVDFSYNKN
TDEKILKNVSFKIEEGQNIGVIGQTGSGKTSLVNLIQKLYIIDKGDIKIGGRSIYSISEESLREKIGVVF
QNSSVFGKSILENIVMGNEGISREDVIKSCEIANANQFITKLENSYDEVLFQRGKNLSGGQRQRITIARA
IAKKPQILILDDCFSAMDINTETIIRKNIKEYISNLREKESKKCTVITISQKISSIIDCDKILVLDEGEV
VGFATHEDLLVSSPIYKKIFALQNLVSEDVN
>gi|260686687|ref|YP_003217820.1| ABC transporter, ATP-binding/permease protein [Clostridium difficile R20291]
MNLSTGNQKVSRLKKKEKPKDFKKTFKRIFMYFKKDKKITRFIFLLVIIDSIISTVIPYTIGKVVDIIDI
DTYSKSIFLKGIIILLSFYIIEFSVKLSKGICTARLSQSIVKEMRSNLFLKFKNLPITFFDKSSTGDIMS
RVTNDVDNISTGISNSLVQLITGILNILMTFIMMFVLSPILTFCSVILIPIVMFVSNFIAKRTRVFFKQQ
QVELGKLNAHIEEMISNINVVKSFNYERKSVNDFKEVNDRLLNISLKSQIYTSLLMPIMNVISNIGFATI
CIIGGVLASKDIITIGVIASFLSYVRQFTRPLNELANLFNTLLSAIAGCERVFEIIDEQEEQEVHNMFKS
EINDNKDGNLNSHFVKGEIELKDVSFSYDSKKKILDNINLKIKAGTSNAIIGETGSGKTTIINLITNFYH
IDEGSIFLDGKDIYSINRNYLRTCFGVVPQEGYIFNDTVMENIRYGNLEATDEEVIYASKIANAHKFIVK
MREGYSTVLSDRGEDLSEGQKQLISIARAVLKNAPILILDEATSNIDIATEAKIQEAINNLTYGKTSIII
AHRLSTISNCDNIIVLENGRIVESGNHKELIKLKGHYYRNILLTQGK
>gi|260686688|ref|YP_003217821.1| putative ruberythrin [Clostridium difficile R20291]
MKKFVCTVCGYIHEGDAAPAQCPVCKVGADKFEEMKGEKNWADEHRIGVAQGVDEEIIEGLRANFVGECT
EVGMYLAMSRQADREGYPEVGEAYKRIALEEAEHAAKFAELLGEVVVADTKENLRVRVDAEYGATDGQLK
LAKKAKELGLDAIHDTVHEMCKDEARHGKAFLGLLNRYFGK
>gi|260686689|ref|YP_003217822.1| hypothetical protein CDR20291_1324 [Clostridium difficile R20291]
MYGVIGATVLVIFVILTAGIMQGKKVDFQLPTVFMIVTFIVSAISEEIVFRGYIQTRLTGLIKNSVLSSC
INAFLFLSTHYPVKWISSGDFSFAILSGFYVICLILLNFSCDLVYRKTNCLWGAWLLHILYNIGTGVLIF
TT
>gi|260686690|ref|YP_003217823.1| putative hydrolase [Clostridium difficile R20291]
MVDNLIKYIHKSNIAIVVLHEIYGVNNFIKDVCQKYYKGGYDVFCPELLGEKRVFSYLKAQEAYDFFINN
VKFDIYKKVEKLINGLKSEYKHVFVVGYSIGATIAWRCSENSLCDGIICCYGSRIRDYMDVIPTCPILLV
FAKYDSFDVDYVSSQLSRRQNIQIEILDANHGFIDTYSKNYSNAQTEVFNIKEKNFLSKCLG
>gi|260686691|ref|YP_003217824.1| putative ferrous iron transport protein [Clostridium difficile R20291]
MMPLILSNTGEEVVIKKISGSDKTRTFLNSIGFVVGTNVKIVSKIDGNLIIDVKDTRVALDKKMASRIII
>gi|260686692|ref|YP_003217825.1| putative ferrous iron transport protein A [Clostridium difficile R20291]
MNRLKDIKCGETVKVKKLEGEGATRRRIMDMGITRGVNIFIRKVAPLGDPIEVTVRDYELSIRKSDAEKI
IVE
>gi|260686693|ref|YP_003217826.1| ferrous iron transport protein B [Clostridium difficile R20291]
MEGMEMSIKIGLIGNPNCGKTTMFNGLTGSSQYVGNWPGVTVEKKGGKLKGNKDVEIVDLPGIYSLSPYT
LEEVVTRNFMLDDKPDAVINIVDASNIERNLYLTTQVLELGIPTIIALNMMDIVNKNGDKINIKELSEVI
GCPVVEVTAVKGQGIMEAAEKAVELASSNNKLNFKLPFVDESKDAIEKIEKIIEEKTPYIDVETRWLAIK
LFERDENVIQKLDISKTILNSIEEITRNCEDELDDDSESIITANRYEFISSIISSIIKKNRKGKETVSDK
IDKIVTNRILALPIFALIMWGVYYIAVSSLGTIATDWTNDVLFGEIIQGNVSNFLASLNVAEWLQGLVVD
GLIGGVGAVLGFVPQIMLLFLLLSILEDCGYMSRVAFIMDRIFRKFGLSGKSFIPMLISSGCGVPGVMST
RTIENDRDRKMTIMLTTFIPCGAKIPIIALFAGALFGGASWVAPSMYFLGIAMIIICGIILKKTSLFAGE
PSPFVMELPQYHVPSAKGVLIHMWDRGKAFIIKAGTIIFVACGVIWFLQSFNWSLQMVDAGDSILASLGN
IVAPIFAPLGFGNWQSSVATVTGLVAKENVVGTFGVLFGISDATEQDPTLLASVASMFTVASAFAFMAFN
MLCAPCFAAIGAIKREMGSWKWTWITLGFQTLTAYIIALLINQVGSLVLGTGGSIAGAIISIFIAVAVVF
VVLTYSNKNMKKEKMGKLSYMKN
>gi|260686694|ref|YP_003217827.1| hypothetical protein CDR20291_1329 [Clostridium difficile R20291]
MNMATFIIAAIVVVLMALAVMYMVKNSKKNGSSCGCGCSGCSSSKSCHSAKR
>gi|260686695|ref|YP_003217828.1| hypothetical protein CDR20291_1330 [Clostridium difficile R20291]
MFKFDVTNELMCIARGSGKFFAKKGAMVAFKGNFNFEKLLLGPSNGGGLGRALLGHVQRSLTGEQMPIMV
VEGEGEIYLAQNAYHVDVISIDPGDSIYVESENLLAFSEQLNYSVKLIGSGVISQKGLFTTHLVNKTGQN
QDVAIITDGNPLILEGPCCVDPDALVAWTGREPYPKVSKLSWKTFIGQTSGESYHMEFVEPGQIVIIQPS
ERLSGLKTDSTPSDRMSSGGLRLGID
>gi|260686696|ref|YP_003217829.1| putative aliphatic sulfonate ABC transporter, permease protein [Clostridium difficile R20291]
MFEKIHKRFKGYYIFLIILILWKIVCVLGIWSSYILPPPEIVLDTFIKMIYDGSIFLNVYASVRRILIGF
LISSLMAIPLGVVFGVNKKMYEYFKPLFEFMRSTPPLALVPMLILWFGIGEESKIIIIILASFFPIFLNT
LKGIKNCDNKLIEVGKSFNLSKKRIFYKIIIPNSMLDIVVGLSLGLGYSFRAIIGAELIAASSGLGYLIS
DGKDMSRTDVVLVGIFVIGFLGILSDYLFSKIITKFSKGKQVDLNG
>gi|260686697|ref|YP_003217830.1| putative aliphatic sulfonates ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MVRSGFLLENIYKKYLVDNKEHLVLDNISLNISSEEITVILGESGCGKTTLLRILAGLENATSGNIYFFN
NDKKCTPKVGMVFQESRLMPWLNVSENILLHTEKDNRNKVDLDKYLKMMKLEKFKNSYPNELSGGMAHRV
SIARALSFNPDILLMDEPFAALDYFTRRKMQKEVVNIHKNTKKGVVFVTHNIEEAMEIAKKIIVFSKNKR
IKQFSVEDEYNRDLTKNYYINLKKEILRELGEF
>gi|260686698|ref|YP_003217831.1| putative aliphatic sulfonates ABC transporter, substrate-binding lipoprotein [Clostridium difficile R20291]
MTSLIMVLVGTVGCSTTNDKKDEPAKKEASLPKEINLTYVKSPLNVPSILEKKDDLFGKEFKKDNIKVNF
HELTTGPEQTQALAAGELDFLHALGGTSAIIAASNGVGLKITNIYSRSPKGYMLITNNDNIKSIKDLKGK
KIVGPKGTILHQLLIAALAKEGYTIDDVEYVNMDIPSAASALESKSADVAMLAGPVALKTINSGAKMIVN
GEGLVSGIIVTAVSDDFAEKYPELVKRFMKVHEETLKYMNENKDEVMDVVSKEVGLSLDETKEMYSWYDF
SSKITDKDIKELEDTQEFLMSNGMQQKKINIKDMLYNQN
>gi|260686699|ref|YP_003217832.1| hypothetical protein CDR20291_1334 [Clostridium difficile R20291]
MSCCNSQFCCKNKIESSYIKWLLEVLGPVFLGSKPAEIINISFTDVNREEKINDIYKYLYKCKKIDFIVI
DKEKKGLKILFVNKKALSEKLKCKKTVNFLKFLGYKQNTNVNAYLEHLVNKLKSDVFPDEIGIFLGYPLK
DVIGFMGYSNYEVSMIKYWKVYGDTKQSEDTYSKFLLHRKKMRKLLDYISVDKIVSCF
>gi|260686700|ref|YP_003217833.1| putative lipoprotein [Clostridium difficile R20291]
MKLKRTLFVGLALVLAIGITACARDNEKPNENAGKNPNESVNNNEGYMNYYSTSYNDYIAGLNRYSIYDT
PESINNQFKDKEYPGNEKYLSDVKAAYKDSRDKIQSFVTSLKKDGKTEDTELKRMNDDLIAEGERLVKDI
DERIEKLDKVSDEDMKKGQNDFMKLVHGTEDVGNDIGSGFRKMIKDMNDRLGITGNNKK
>gi|260686701|ref|YP_003217834.1| hypothetical protein CDR20291_1336 [Clostridium difficile R20291]
MENDTIKADDILNYCLSNLDDVVLMDSWGERAIYYNPNGVLKRGVYVLTIKEKDSNHDKGSLVSRPNVYR
VNIGLKKETFIEMFGYIPKRPGVGQIVDMDFDFTKLDTIMPHPIYSWMGWICVLSPTEKTFENFKTLIEE
SYNFAKQKFKKRKNK
>gi|260686702|ref|YP_003217835.1| putative transcriptional regulator [Clostridium difficile R20291]
MNMSRAERLIELMITINAKRSFTAGELAEEFSVSKRTILRDLQVLESVGFPLYSKVGAAGGYHVLKERIL
PPITFSESEVKSIFFAYQSLEYYNDLPFEQETISVLKKFLNCIPNDIQYNIENMRRKLVFWTPDRHCSTP
LLKELFNIVMNEFTIKIEYSSKQKNSIRTIVPIGLYAMNGLWYCPAYCIKSESVKEFRADRIVKILSIEN
LSNKKYKVLSSIHDYLKNMEVGTDYHIKINLTDEGVKRCETEFLLARGLKILSKGGYIDMYIPKSTLNWV
AEYFLTFGKNATIIEPIELKHLIKK
>gi|260686703|ref|YP_003217836.1| D-methionine ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MGGNFMISIKNVNKYYGKIQVLKDVSIEIESGEIFGIIGHSGAGKSTLLRCINGLEEYQEGSVLVSDKEV
KSLNEKQMRDLRKELGMIFQHFSLLERKTVFDNVALPLECFGYSKAEIKKRVLELLEVVGISEKKNDKPR
NLSGGQKQRVAIARALALNPQVLLCDEATSALDPNTTKSILSLLEDINKKLGITIIVVTHQMEVIKQICG
RVAIMENGEVLEVGDTEEIFLRNTKGLRKLIGEESIILPKGTNIKILFPKDISNEAIITTMARELNIDVS
IIFGKLEQFKDDILGSLIINISDKSGEHVKQYLTSKGIRWEEMINE
>gi|260686704|ref|YP_003217837.1| putative D-methionine ABC transporter, permease protein [Clostridium difficile R20291]
MNSLIDFLTTLFPNALLQTLYMVIVPTIVATILGFILAIILVVTKPDGLKPNSTINSALGFIVNIFRSFP
FMILIVAMIPITRLIVGTSIGETAAIVPITIGAAPFIARIIESSLNEVDKGLIEAAKSFGATKRQIVFKV
MIKEAMPSIVSGITLSIISILGYTAMAGAVGAGGLGNIALIYGYQRFDTAVMVYTVIALIILVQIIQGVG
NLAYKKLK
>gi|260686705|ref|YP_003217838.1| putative D-methionine ABC transporter, substrate-binding lipoprotein [Clostridium difficile R20291]
MKLKKLLSVALVSAIAISAVGCSNKEDKKILVGASSNPHAKILEVAKPLLKEKGYDLEVKIFDDYVLPNT
ALDEGSLDANFFQHIPFLEETVKEKGYKLTYTSKVHIEPMGFYSEKVKSLDELKDGAVIAVPNDATNGAR
ALKLLAKNKLIEVKDGELITKKDITKNPKNIVIKEMNAEQLPTVLKDVDGAVINSNYALTANLNPTKDAI
VIESSDSPYVNIIACRENNKDSDKIKALSEAMNSKEVKKFIQDEYKGSIVPAF
>gi|260686706|ref|YP_003217839.1| putative two-component sensor histidine kinase [Clostridium difficile R20291]
MESKGTLSKNKVYILANGLFLVIALLNINLYTVSINMYRIILLWIFGYSIVYISSFKTDEFINILKVGCL
VLVFVSILGVVNLKIQKFQIVLLNLSIINMSTFIYLTISKVKKLRISPILIFYSAFVILDYFIRNIFSDI
NWNMIIILINICISMFNLLYLLNKLDSNIEHYKLIKDLTYFVFFTTIICFVAISKINIVDSDRLIGVIYL
LLCNHTYYVYVYSLNNRVVYPYYELDSINKKLSKKSEQLGKINLAIEKDMIIQRTLKNYIDQRKELLRQA
LDTIPNVWIVTDYDFNISYTNNKFKDEFSKDMNNYYKILTFIKEDEKVAEKLKKFDNDISIIDKLVELND
KIYLLSLSNNKDESNYLISLNDITNEIKIDEEIRNINKDYENIILNIPSPILVRSAEGGIKKNKVISINK
KYEKSFKCVSSDLVDMTLEQYFETFNIDFFDNRKFKRLNLTQEKKAEIVSYNDTANCIVNFVMSDSEGEE
HVEEVRVGDYWSDNKLFKLLTFRDITKEINILRTVNEQKIIYEKLLDVIPEAIFLEDLSTSRVLYTNRAF
RELFGISSDVLGVTTQKYRNILVKKYINNLNIGEREKSIHIVNENNHIKEVKMISRTLYFGQKRSRVRII
KDLSVQRESERLKKALIKQRQYDQMKMEFYANISHELKTPLNNIYSSVQLIENLYKKGKIIDFQDILKEH
IKITKQNMFRLLRLIDNIINISQVKSDIYKIKAVNFDIIDITERIVTSISSYAKSKGIDLIFDTDEETVM
VGLDPESIERIILNILSNAIKFTLEGGEILVGIYKKDETVEIIIKDTGVGIDKEKLNDIFNRFKQIENSG
ISNEFGSGIGLCLTKSLIEIQNGKIYIDSKVGEGTNVKVIFPIKEVVEEVYDNSNYNDNIEKFEIEFFDI
YK
>gi|260686707|ref|YP_003217840.1| putative 3-methyladenine DNA glycosylase [Clostridium difficile R20291]
MEKDFFRKNGIDLAKSILGKYLIRKYENKVIVTKIIETEAYMGVNDKGAHVYGNKKTDRTKPLYLDGGHI
YVYLIYGMYNCLNLSANIENVPECVLIRGVEPITSLDEISMNRYNKAYTELSKYQVKNITNGPGKLCKAL
KIDRSLNSKSIMGEELYISDFYYDDKGKKVFSKDELDIKTSKRINIDYAEEAKDFLWRFYIE
>gi|260686708|ref|YP_003217841.1| putative transcriptional regulator [Clostridium difficile R20291]
MVLNKDIGAKIKQLRTQKQMTLKDMSEKTNLSIGFLSQLERGLTSVATDSLGKIASVLDVELTYFFMKPK
EHKRAVLRSYEKEVFDVENSTFIHYHLSSSLKEKTMLPRLIEILPSKSSEEICCYVHEGEEFVYVLEGTL
TVFLGDEQIEMYPGDTIHYNSEKNNHNWVNYTNKVVKILVVSIPNPFEKSDAVKEA
>gi|260686709|ref|YP_003217842.1| pyrroline-5-carboxylate reductase [Clostridium difficile R20291]
MKKIGFIGAGNMASAMIGGIVNSKLVEPNMVIASAYSQGTLDRIDANFGINTTKDSKEVTRTSDIVIVAV
KPDIYDDILEEIKDFIDDNKIIVTIAAGKSIKDIESIIGEDKKIVRTMPNTPALVNEAMSSLSINKNINN
EDLEAVTEVFNSFGNTEVVPEYLIEAVIGASGSAPAYVFLFIEAIADAAVIAGMPRPQAYKFASQAVMGS
AKMVLETGKHPGELKDMVCSPGGTTIEAVKVLEEEGFRASVIKAICACIEKSKKMSE
>gi|260686710|ref|YP_003217843.1| hypothetical protein CDR20291_1346 [Clostridium difficile R20291]
MYVKSRRNIMKFKKQISSIVVSTMLVLGSMNLSYADGTNVVTLGANLSESQKQQMLNYFGVKKDQVLVLD
VTNAEERQYLQGVATEGQLGKVTISCSYVEPTKKGNGINVKTANLTWVTSSMIASTLTTAGLEDANVIAA
APYPVSGTGALTGIMKAFEDASGKKLDETKKEIASEELVVTGDLGDDIGQEKATGVMNDIKTEIVKNGTK
DTNQIANTINNVVNNYNITITPEQKEQIKGVMKKIADQNYDYNSMKNTLDNVSDNVNEQLKKLGESVKGS
GILDTIGGWFSGIGDWFSGLFSGGDKKDLGILNNTNDESLGSDAVINSTEGVQINPQNNTNSNNDSDTNS
SKNDTSSNNENNDSSQTNENNTTNNSENQSNNNDSVGFFEKIKNWLSGLF
>gi|260686711|ref|YP_003217844.1| hypothetical protein CDR20291_1347 [Clostridium difficile R20291]
MSKELVKDRVIKYLIEDLLVPQDMIDTNVELAEFEEGAEGVLDIVVNVKDEEDYYAPVMIVQCLDEDVEL
EGEVLQKQIEFLEEVDNITMSGRLVLTNGDAMMYADWRGEEYDTEAALPTYDIMVKEFHEMEQQAKDLEE
HHHHDKNCGCGCNHHHEN
>gi|260686712|ref|YP_003217845.1| RNA polymerase sigma factor rpoD [Clostridium difficile R20291]
MNRRGLIMDTKKENNYENYICVGSSNVSNAMKMYLKEIEEYKMLSAGEEVELAKEIINSSSVAKEKFINS
NYRLVVSIAKRYKRDSIDMLDLIQAGNIGLIKAVEKYDYKKGYKFSTYATWWIKQSITRYIDDCENTIRI
PIHLHQRINFVKKKKQELLNVLLREPTIDEIADACGLEVDKVLELLRRDKNVVSLDTPLKEDEDSSLVEF
IPSDADFKDVVIHEVEQHNLKEKIEELLTGLGEQEQQVLRMRFGIDDDDPKTLEQIGKVFGVTRERIRQI
EAKAIRKLRHPSKLKQLKHFY
>gi|260686713|ref|YP_003217846.1| putative membrane protein (virulence factor (MviN) homologue) [Clostridium difficile R20291]
MSKVAKATFYLMIVTIISKILGMGRELVLSSIYGTGLYTESYLTAMNIPNIIFAAIGTAIVTTFIPMYQD
ISSKQGEKQALKFLNNVLNIIVGICIVVAILGVIFSKQLVSIFAIGFEGERFLLTVKFTKILITGIIFIG
ITSVMSAFLQIKENFIVVGFGSIPYNIVIIISIMLSTVFGPYILPIGAVVAMVVQLLFYMFFVKKTNYKY
LYYLNFKDDSLIKLLALLSPVFIGVAVNQVNSLVDTTLASTLVKGSIPALTYSDRLNGFVTGTFTASIVS
VMYPMLSKLSAENNQKKFTSSVKSSINMIIISMIPISVASIFFATPVVRIIFERGAFDARATQMTATALI
FYAVGMTAFGLRDILGKVFYSLQDTKTPMVNGIISVGVNIVLDLVLIKPMAHGGLALATSSSSIACILLL
FLNLKRKVGYFGQDKIIKATLKSVVASLIMGVLSYFTYKFIFGILGVGTFNEFVSLAISVIVGGGIYTLL
MTIFKVEEVDMILNIAKRKLHLKK
>gi|260686714|ref|YP_003217847.1| putative deoxyribose-phosphate aldolase [Clostridium difficile R20291]
MKHILKTVDHTILKATTTWEDIKILCDEAVDMSVASVCIPPSYVKRASEYLKGKIKICTVIGFPLGYQTT
ATKVFEAKDAIENGADEVDMVVNISDIKNKDYDNIGKEIKEIKKAIGDKVLKVIIETCYLDEDEKIKMCE
IVTMSGSDFIKTSTGMGTGGATLEDIKLMKEHVGKNVKIKAAGGVKSISDAEKFIEAGAERLGTSSICKI
LKNEDTTDY
>gi|260686715|ref|YP_003217848.1| putative transcriptional regulator [Clostridium difficile R20291]
MKLVLNNEEPIFIQIARAIEDEILSNGIKEEEQVPSTTELSKLYKINPATVLKGINILVDKNILYKKRGI
GMFVSDGAKTIIKEARKENFKHNFVKNLLQEANKLEINREELVDIIINFKED
>gi|260686716|ref|YP_003217849.1| ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MRSSIKIENLSHSFKKQNIFNNMSLNFEKNKIYGLLGKNGAGKTTLLNIMVNQLIQNEGEIEILGKNPKE
DIKVLEEVCIVREKEFYSPDFKVGQIFEFSSSFYKSYDKGLEEELCKYFDLNTKKKYKQLSRGMKTILSN
IIGICSNSAITIFDEPTIGLDAVNRQEFYNIILDSYIKNPRTIIISTHLIDEIDDLLEHVIILNEGKIII
DEEIDVIKQKAHYITGNKEELEKLECIKNIKPKKAFGNAVAYFYYGDFSENDEKILKNSNIDVGYIGLQD
MFVNMTKKEEL
>gi|260686717|ref|YP_003217850.1| putative ABC transporter, permease protein [Clostridium difficile R20291]
MNELKPYIKFFNKNTKLYIIIFMIVGIVMNILPVFILKIFGEASKTNLSTIVNPILTYITILLFVYGVNI
ANKDFSGALSIRADRKSCIKAIVIDLIILSFVISILGIVLIFLSKLFIEIITGYSIELSVLLKRDMIWTS
ISALIDPSTSSMPLTYLNYFVQICINEICIGFIGVLLGAFTYRVRKVTSITILIGLPILMVIYIVNFATK
NMHKMLLYLEKIIYSFQNPFILFGTKVGIIVICIIFIILLLRKAPIKEYANDLL
>gi|260686718|ref|YP_003217851.1| putative drug/sodium antiporters [Clostridium difficile R20291]
MENLFTRKFTTFEFLKFVSPAIISMIFISLYTIIDGIFVSTLVGSDALASINIVLPIINLVCGFGIMMAT
GGGAIVSIRMGENRQDEANSTFSFIVLFSLIVGISFTVISYFFIKEISILLGATDKLLPYCITYGKVMIL
CTPFYILKFIFNYFARTDGNSKFSLFLSVIGGVTNIILDYVFIKYFGMGLLGAAVATAIGIILTCVLGII
YFLSNKSTLKLRKPKTDFRLIRDTMINGSSEMVTELSTGITTFLFNVVALKLAGENGLAALTIVLYAHFL
MTSVYLGFAAGVSPLISYNFGAENSDKLKETFKHSLKFIFVSSLLVFIIALVFAPFIVRVFVSPDNTVFK
LALQGLKIFAFAFLFVGINIFASGFFTAFHNGKISAIISFSRAFVFIIIGIIILPPMLNMTGLWLTVPFA
EVITIFISILFIKKYKGRYKY
>gi|260686719|ref|YP_003217852.1| putative thioredoxin [Clostridium difficile R20291]
MKKFFMVVLGCIFVLGVISGCSKKESKPVEKNKSNSEWFSNLDTEDVDGNKVTKEIFSNKELTLINVWTT
WCGPCVGEMPELEALSKEYESNNSNVAIKGLVVEVDKTDMRTGLSNEEKNLVKNIMKKSDATYQQLTVSE
ELKKTDFKRVMEFPTTYFVDKKGNFVGEKVVGANSKEEWKKIIDERLKMVKANE
>gi|260686720|ref|YP_003217853.1| hypothetical protein CDR20291_1356 [Clostridium difficile R20291]
MSNFIKDNKKGISIIAISIIFIALGTYRGETNTVLTKAIMICLECIGIG
>gi|260686721|ref|YP_003217854.1| putative iron-sulfur cluster-binding protein [Clostridium difficile R20291]
MKLLSKVNNNIRLIIQVAFTALTNGYVNGFLEGTIYGGESKKLCVPGLNCYSCPGALGACPIGSLQAVLS
SREYKFSFYVVGFLMAFGAFFGRFVCGWLCPFGLVQDLLHKVPFPVKIKKVYGDKYLKYLKYIVLIMFVI
ILPVAIVNVAGGGNPWFCKWICPSGTLLGGIPLILGNENLRESIGFLFSWKLSILLLILLMSIITYRPFC
KYICPLGAIYGFFNPISIYRFKIDKDKCTNCTACQTKCKLDIPIYKDVNSPDCIRCGECIKVCPQNAITT
TFSKDKKENNICAKKYRGI
>gi|260686722|ref|YP_003217855.1| putative lipoprotein [Clostridium difficile R20291]
MKKFILCIIMFAISVLVLAGCTNDNKIKNEVDSMFNSIKTQDADTVDKYFPKSGLGNLIYEDKEGFKMYS
KNMTWEISDIKNNKDKVTVDLKINNTDMVSILKKNPPKLGEMMPNPTMKDIDSAKKKEFNITLELVKSGD
NYVCKVNQESAMKLLNVITGGGIDYLADYNKDYYKQLDEEQKNYENKNS
>gi|260686723|ref|YP_003217856.1| hypothetical protein CDR20291_1359 [Clostridium difficile R20291]
MIRQTPLEKRYDKLGPHIVTAFKKRYFDAYYCKTRNEALQQILDLIPQNHVVSWGGSETLKEMGVQTAVR
EKGFKVIDRDLAKTPEERTEIMRQALLCDTFLMSSNAISEDGQLFNIDGNGNRVAAMIFGPKNVIVVAGM
NKIVKNIDDAIQRTRTIASPAVVQRFQDVNTPCYINGSCIDCTSPESICAYMVTTRISRPAKKIKVILVG
ENLGL
>gi|260686724|ref|YP_003217857.1| hypothetical protein CDR20291_1360 [Clostridium difficile R20291]
MIDNQKYVILSLELHLFFSRIMKEHALFLEAGFTNKNYNLAMEADHYKKQFEDLLSYTVSASNGIIRPDI
LYSEELVTTLTSVAEQKTEEFTGIEINKDITTRELNLQSGVNPQVGQDLVNYVAQLNSDAIRLLDGLINF
KERVLDGVLSCTIFTSNYPLLLEHIIHEANLYRSYVVDLENKIDIESKNAKEIELFWDHIMMEHALFMRG
LLDPSEGELINTSNDFAIKFNELIEKTNEMTDSNIKNITEETLNETVEFKDFKEAGASGIEQCKIKSIIL
PLLADHVLREANHYIRILESYKNM
>gi|260686725|ref|YP_003217858.1| putative pantoate--beta-alanine ligase [Clostridium difficile R20291]
MLVKEIKLLRNIIKDWRKHGYSIGLVTTMGFLHEGHQSLIKKAVKENDKVVVSVFVNPTQFGPNEDFNSY
PRDIDKDFKYCMDSGATVVFNPSPEEMYLKGNCTTINVSGLTDFLCGAKRPVHFGGVCLVVSKFLNIVTP
DKAYFGEKDAQQLAVIKRMVKDLNINTEIIGCPIIRENDGLAKSSRNTYLSEEERKSALILNKSLSLAKE
ELVKGNLNPKNIKELITAKINSEHLAKIDYVEIVDSETLQPVKQIEHSILVAIAVFIGKTRLIDNFTFEL
NI
>gi|260686726|ref|YP_003217859.1| 3-methyl-2-oxobutanoate hydroxymethyltransferase [Clostridium difficile R20291]
MKNTIQTFKNAKYEGKKLSMLTAYDYSIAKIMDECDINGILIGDSLGMVIKGEENTLSVTIDEIIYHTKA
VKNGAKNALIVSDMPFLSYHVSIEDAVKNAGRLIKEGGAHAVKLEGGSNVIKQIESIVNAQIPVMGHLGL
TPQSVNSFGGFKVQGNTSETARQLIEDAKLIEKAGAFSIVLEGVPTKIADMVTNSISIPTIGIGAGINCD
GQILVYQDMLGVFGDFVPKFVKQYANIGDIMKDSIKNYILEVNTGAFPQEKHSFSINESELEKLY
>gi|260686727|ref|YP_003217860.1| hypothetical protein CDR20291_1363 [Clostridium difficile R20291]
MANYFLSKGYCVSGFYGRNQLSLLESINLTKTKIYSNLRDIIYENDILFITTSDDSIEIIDKKLSKFNLK
HKYICHTSGSLKSSILFCSKKAGALIYSIHPIFAFSNKNTNIKKMKDICFSIEGDNEQDDLVIQNFIDGL
GNQFFIRDKDTSSTYHLANVLVSNLVLSLLDIGVSYFIKLGLSEEESLKAISPLVKKNIENILDNGFTKA
LTGPVSRGDITPIRKHLSVLNKKDEDIYKILSLNLLKIIALGNDNSLKGTKNITIENAIENLISKSEKYK
EIYKLLGGKNDEKYHTDF
>gi|260686728|ref|YP_003217861.1| putative signaling protein [Clostridium difficile R20291]
MNKRNFEVILNQLQINIYVTNIHTNEIIFMNKKMKEEYNILDPEGKVCWQVLYPEQNSTCSFCKVLELLK
NDKKGVLIKWYEKCNKLNRVFENYDSLITWQDGTVVHMHQSIDIANSTILNKPIKINEFNEISNTKEGKG
VFNFSRDNFDYNSTLLYDALIRGTDEYIYICNMKTGVFRYSPSQVELFDLPGEIVENPLIYWKKIVHPED
WNRFYKSNTEIGKNQMDYHTVEFRAKNRSGEYIWLRCRGQLMRDEFGEPSIFAGIMTQLGKQNKIDSLTQ
LLNYHEFMSVFEDKISNPMIEKLCIVLLNIDDFKNVNEMYDRDFGDNIIKTLAQSIQSILPDNAELYKLD
GDEMGILVDNVEENEILTLYNQIQNMIIHLQLWRKYGLNITISAGCVIYPKHGDTVKELYKCASYSLQYA
KEHGKNRLVFFSQEILKNKMYSLEMMRDLKASINDDFRGFSLRFQPQVDTQSHKIIGVEVLLRWTNDKCK
AISPLEFIPILEENDMINIVGAWVLRMALRTFRKWIDYYPFFKVSVNVSAVQILEDTFIEDIVKIIDDEN
FPYQNLVLELTESHTVQNMSILQFKFKALQDLGIYIAMDDFGTGYSSLEVLKFSPIDIVKIDRVFVKDIL
KSKFDATFIHFIVAICHDVGIKVCLEGVETQEEYDLVKQIKPDYIQGYLFGKPQTATEIFDLLKLDN
>gi|260686729|ref|YP_003217862.1| MerR-family transcriptional activator [Clostridium difficile R20291]
MEKQYFTTGEFAKLCGISKQTLIFYDKIGIFSPEYKDKNNYRYYSVYQYDTLDILQSLREIGMSLEEIKE
YIQNRTPQLCVKMLKEEEKKIREKIKKLRKISSKMQNRINITVEGISKMNSEEIYISKKFEEYLVLSSDL
SNMSNSDFMMELIDFTNYCKSKNLYQGYELGVIVSNENIKNGDYLSISSFYLKIDKKIKDKKLYVKPEGM
YACIKHIGKYEDSYKSYEKLKKYIYENEYKIIGNSYEESILDFFCESNEDNYMTEISIQVSR
>gi|260686730|ref|YP_003217863.1| putative ferrous ion transport protein [Clostridium difficile R20291]
MGLTHNSTKMSSLKDMFDIDNKEDQFVIALAGNPNTGKSTVFNHLTGLRQHTGNWPGKTVATARGNFKYK
NTEYALIDLPGTYSLFALSQEEIVARDFICFGNPDAVIVVCDATCLERNLNLVFQVMELTDKVILCINLI
DEARKKGITIDKKLLEDSLGIPVILTAARNGSGMDELLDTLNDVSFDKYKLNNKPVRYNENIENVVKSIQ
PELDNIIPGINSRWLGLRLIDGDESIFESMSNYIDKDSIDAINEVKKKIPDNINKQKIRDEFTKINYDYA
KKLSDECCSNVAKKSTDREEKVDKILTSKIFGLPIMLLLLGTILWITIEGANYPSTLLSNLLLGFEPSIS
GILNSINCPSWLNDMLVLGLYRTLAWVISVMLPPMAIFFPLFTLLEDFGYLPRVAFNLDHLFKKACAHGK
QCLTMCMGFGCNAAGVIGCRIIDSPRERLIAILTNNFVPCNGRFPTLIAISTIFFSSVITNSFVSSVATA
LCITLLIILGVIITLLVSYTLSKTLLKGVPSTFTLELPPYRVPQIGRTLYTSIIDRTIFVLGRAVMVAIP
AGVITWIFANIYIGDLSILSHVANFLDPLAKLIGLDGFILLAFILGFPANEIVVPILLMAYLATGSMIEL
DSFSALGQVLREHGWTYLTALNVMLFSLLHWPCATTLLTIKKETGSLKWTALGFLMPTILAFVVCFLTTT
VYNLFI
>gi|260686731|ref|YP_003217864.1| putative ferrous ion transport protein [Clostridium difficile R20291]
MKNLNDIQVKKTVKVEDILSSGNLRERMLALGLTRGAVIDVVRKGPKNNLTVYKIRGSKIALRQEESSLI
LVSDI
>gi|260686732|ref|YP_003217865.1| putative acetyltransferase [Clostridium difficile R20291]
MFKIKHFNDLSLDEFYEIAKSRYEVFACEQKIFSLNDYDDIDKSSYHIFLKENGLICAYARIIPKEYSSY
NDVSIGRVLVLSSHRRKGLAKQMMDCAIDFIKINLHENNITLSAQTYIKNLYLSCGFKEISEVYDEAGIE
HIKMRL
>gi|260686733|ref|YP_003217866.1| hypothetical protein CDR20291_1369 [Clostridium difficile R20291]
MIYYIKNKTLVRKFMIYGGSVLNTTKKLTEAALLSSLFIVVTIIAVSTGFGYAIYLDFIVPVFFCIICLK
CDLKYTILSGITSLLIISLVLGNLGTAIWASQSVLLGIMCGYLINKPTMVMDDLVYGSVFGVIVMVFIDI
YASTLIGYSFMKEFQGYSKWIYFNGYTNFIYYLMIALFPFGMVFCIYLLSLILGNKLHILDSNSLKKFLI
FKNFRSLNQFLCCSKKAFYICVSYLAIFEVLKLLNVKVDSVYLKTIFISITYISVYFIIRDSCMSLQNFI
IAKFRKLLYARILFLIIILLLFFIFDVTVISLIIINAFLNKKINIRLSQSNIVNKQINLLIEK
>gi|260686734|ref|YP_003217867.1| tyrosyl-tRNA synthetase [Clostridium difficile R20291]
MKSIDEQMRIIMKGVDDLIDEKELREKLIKSEKEGKPMIVKLGLDPSAPDIHLGHTVVLRKMKQLQDLGH
QIVIIIGDFTGKIGDPTGKSKARKALTTEQVLANAKTYEEQIFKVLDKEKTIVRFNSEWLAKLNFEDVIK
LAATITVARMLEREDFKKRYEGQMPISVHEFFYPLMQAYDSIALEADIELGGTDQRFNLLMGRSLQREFG
MESQIVIMMPLIEGLDGKEKMSKSLGNYIGIDEEAGIMYQKSMEIPDELIIKYYNLVTDVHPDEVNKIES
QLKEGSVNPRDIKMNLAREIVTLYHGEESAKEAEERFKSVFQKGQIPEDIQTIQVKEDGFDLIEVLVSNE
IVKSKSEVRRLASQGGVKVNGEKVEDLSTIVKESELVVQIGKKKFVKIELVK
>gi|260686735|ref|YP_003217868.1| putative polysaccharide deacetylase [Clostridium difficile R20291]
MSVYFFYFLRYNYNIFLIQFDKRGNAVIMVKKRKKKTVTLTILVVIVIGIFSMAWADMSRKKEMKETQER
LKAERLEKERIEKEKNEPIIGAKKEAVKEYGYDAKIVWDKLNKYDYSNNGEKIVFLTFDDGPSTTNTPQV
LDILKRHGVRGTFFIKGDSLERKGANEILKRTFDEGNAIAHHSYTHDYKKLYPGRSLNLDTFVNELNKTD
EAMKKVLGKNFSSNVVRCPGGYMSWKNMEPLGNYLKEKNMASIDWNALNADAEGKKKNAQELFEHAKKSS
EGKEMVVLLMHDTYGKQETVNALDQIITYFKDNGYQFKILI
>gi|260686736|ref|YP_003217869.1| hypothetical protein CDR20291_1372 [Clostridium difficile R20291]
MLFRGFIILQKNKKEGALLKKYFGEIGLIFIAIIWGSGFVATQFALDGGLTPLQIITLRFFLAAIIMNLL
FFKQIRANMGKKLLKAGGILGIFLFLAFTVQTIGLMYTTPSKNAFITAANVVIVPFIGFILYRRKLDKIG
IISSLVALIGIGILSLEADFSINFGDFLTLICSFGFAFHIFFTSEFAKDNNPMALTAIQFTVAFLMSVVV
QTFAGQLKMEAELSGYMGTMYLAVFSTTIGFLFQTICQKRVDGTRTAIILSTEAVFGTIFSIIILKELIT
AKLIIGSILIFVAIITAETKLSFLKSKKVKLKDSEESSLESI
>gi|260686737|ref|YP_003217870.1| putative rubrerythrin [Clostridium difficile R20291]
MKKFVCTVCGYIHEGDAAPAQCPVCKVGADKFEEMKGEMVWADEHRIGVAQGVDAEIIEGLRANFTGECT
EVGMYLAMSRQADREGYPEVAEAYKRIAFEEAEHAAKFAELLGEVVVADTKENLRVRVDAEYGATDGKLK
LAKRAKELGLDAIHDTVHEMCKDEARHGKAFLGLLNRHFGK
>gi|260686738|ref|YP_003217871.1| putative iron-sulfur protein [Clostridium difficile R20291]
MKSVSVRSCKTYNYEEVKLSIEKNLEDIGGIDKFVKKGSKVLIKPNLLMKKKPEEATTTHPMVVKVVCEK
LLELNCDITIADSPGGPYNQNSLKSIYKASGIEEVANELGIKLNYDVSDVKIHSKKAHVLKYMDIIKPIV
DSDYIINLCKLKTHIMATFTGGTKNLYGCIAGLKKAEIHYRFPTEELFCENVLLDICDYIKPTLTIMDGI
VGMEGDGPSAGTTREIGVLLASQNPYAIDVVACKIISLLPNRVATIRGAIKRGYIQEDFSDIEILGEDIK
DLIIKNYKIPNVSKDLRLFSVKLPKFLNEPISKLITPKPVVRFQDCIKCGKCKEACPASTIEIGTKGAII
DLSKCIRCYCCHELCPKKAIDVKRNFVFKYVK
>gi|260686739|ref|YP_003217872.1| dihydroorotase [Clostridium difficile R20291]
MILIKNGRVIDPKSQRDENIDLIIKENKIYKIGKFDESDEYEKIIDASGNVVAPGLVDVHVHFRDPGFTY
KEDIESGAKSAARGGFTTVICMANTNPIVDNEDTFNYVKEKSKNACINVLQAAAITKGFEGKELVDMEAL
KKAGVPGFTDDGLPLMDSNLIMEAMIKAKELDVPLSFHEEDPSLVGNPGVNAGKVASELGLKGASSVAED
VMVARDCMLALKTGAKVDIQHISSGVSVDMVRFAKYLGANVVAEASPHHFTLTEEDVLEFGTNAKMNPPL
RSKWDRDKIIEGLNDGTIEIIATDHAPHSKEEKDREFIKAPSGIIGLETSLALGITNLVHKNHLSMMQLI
EKMSINPAKLYNLNIGFIEEGAVADIVIFNPEEEWTVESFVSKADNSPFKGKSLYGKVNYTICNGEIVYN
A
>gi|260686740|ref|YP_003217873.1| ABC transporter, permease protein [Clostridium difficile R20291]
MSLLKNSLANLKGHKLRVFVALLWIIIGITSVILVSSIGNGFQKEIKKSVNNVNPNKTTISFESADNTGL
TDDMSIFLKPFNAKDLEELSFVEGVERIAPSRDGFNLDSVYSSQASFDKKTTYVDVGPVKKDSKINLICG
RDFSLDDEKRKVILLTLQSTSEIFENPEDALGHGININGTIFEIIGVLDDSQQNQAGGFFGGYQDMQFTT
SLVPKKAFDTLMSQNSYSNEIYQLDLVSSKGYNVNEVANNVIAKLYEMHPGINGSYTTPDPTEQTAYLES
INSNVNKYVSIITVVAMFVGGIGVMNIMYVSVMERQREIGIRRAIGAKPRSILFQFLVEAVFITVCGGIL
GTIVGFAATNYVSKYIGFEAIPSLNSLFYAIVATILTGVVFGLIPAFKASKLDPIKAIYK
>gi|260686741|ref|YP_003217874.1| ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MLIKLENIQKYYKVGKDELHVLKSLNLEIESGEFVMIMGKSGSGKTTLLNILGFLDVFDEGRYIFDGTDV
TNLSENERSVFRNINIGFVFQQFNLIETLNVYQNVELPLIYNKALKKSNREEIVKDKLSSVGLLDKLKQK
PLQLSGGQQQRVAIARCLVNDPQIIFADEPTGALDSETSREIMELLTRLNKQGKTIIMVTHDQDLTKYAT
KVIRLKDGVFTSEV
>gi|260686742|ref|YP_003217875.1| putative ABC transporter, permease protein [Clostridium difficile R20291]
MSFLKKFKNKRFRNNSFKSNNFRNSSFGSSGFKSKNKGFKNNPFKNKRFKIYAGIAVIILLILGVLAYVD
SKNTELQANENFIETYTIPENEKIFINGMVVPKQTKDFNISGDYELSDVNVTNGQKVNQGDLLFTAKNPT
IIAEIDSLKSQLSQYKKQKISLSDIAENKDAIASINAQITALNSQIASLDKKAYDRVTAPFDGTVYLNDQ
TGNPDQPVSFMTIQGLEFYMKGQASEQDLPKMKIDQMVNILVFSTDQKLTGRISFISDKPSTPNTEMGAQ
QNTLSYYDINIAFDNQEGLVNGFHLQASLEVANSSFKIPASCVLKDNKHSYVFKDLDGILKKQIVDVASQ
NDDFAVVRGGLEQGDIIIKHPTKEMKEGDPVQGDGVTAGSNNGDTTPNKKVEEVTMDVN
>gi|260686743|ref|YP_003217876.1| two-component sensor histidine kinase [Clostridium difficile R20291]
MSFKDFLKDKLGFLVYNFTFLIFTVSVIIFSPVDVFLTDTILYILVVNVVFLFLYLFISYIKKNKFLDKI
KNDTFKINMNDIELARCKNEEKIYLNIIKNHQYQCNNIINNNIEKFEENKEILNMWVHDVKIPIAIIKLI
LEQNENLINEKISDDIDSEIFRIENSVEKILYLSRLEDFHKDFLIQEVNIEKIIRNIIKKYSKYFISKKI
ILDLNNLNFKVLSDEKWLYFIFEQLLSNSLKYSSLGDNISIYCKRTKNYLQLRVEDTGCGIKKEDLNRIF
NKGFTGNNGRNNSKSTGLGLYLVKELCDKLGHKIDVDSEYNQYTKFTITFKCDL
>gi|260686744|ref|YP_003217877.1| two-component response regulator [Clostridium difficile R20291]
MFKIMVVEDDVSLKNIIAKCLTKWGHDVHQIENLENIIEEFKNYNPELVLLDINLPFYDGFHWCNEIRKI
SKVPIIFISSRNSNMDVIMGVNLGADDYIQKPFSVDVLVAKVNALLRRTYNFVDNNSNQIIHNGVTLDLS
TATINYEDNTIELTKNEIKILHELMKYKGQIVSRNKLMKKLWDNDWFVDDNTLTVNVNRIRSKLNEIGLE
DFIETKRGLGYIIS
>gi|260686745|ref|YP_003217878.1| ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MEEILSVENIKKEYGRKGSKHEALKGITFKVYKGEFVGIMGSSGAGKSTLLNIISTMDLPSSGDIYINGK
NTIKMKQNELADFRRDNLGFVFQDSNLLDTLTIKENIMLPLSLKNERVSVIENRIKEISKELNIESILDK
YPGEVSGGQKQRGAVCRAIATKPSLVLADEPTGALDSKSARDLLNCLLKLNKDSNKTILMVTHDAISASF
CNRILFIKDGIIFTEIVKGESNREFYNKIVNTVSLIGGVNKNDFI
>gi|260686746|ref|YP_003217879.1| putative ABC transporter, permease protein [Clostridium difficile R20291]
MTLFRIAMQNVKNSFFNYLMYFISIVFSVFVFFSFKSIEYNEALSSLGEKTRMSINTSSIVIVVFVFLFI
YYSNSFFFNRRRREVGTYSLLGMRKNQIGKIFLYETFLMGIVAILIGIFLGLLFSKLMTMMLVKLMNEMI
VVNMNLSIKALVKTLAVFLIIFIVIGIRNTIVIRNKRIIELFNKYPEKYKFKKFIKLKCVLGVLLIAISY
LMSISYFIAENIMLSVFILVTIIPGTFLFFSSTMYMIIDAVKKRKSFYYKGQNLIAFSELGFKLKSNSSV
LAVIAILIATSVTMLGFTISLYYDIDRNISENYKYSYTINLGNSYVNNEIDKLLYKYKKDNKIIFDKTIE
LIDKDINIEMYYKNGNSYIEDRTSVDIIRESDFKKLRQYQNNNYEELTSKESVYYVSDSYKKMFFKDFEI
EKINLYIKDTNEYDINLFKVQKSILEPEINSQATFDLIVVKDDVFNQLKLHGNSRLIRLIDIKNEKKELD
LTLKFKNIVSENMKFTYPFNFTSSIESYNNLIKLSGLMLFIGIFLSVVFLLCTGSIILFKQLSNIYDDKE
RYIMLIKLGANNKDIEKIISKQLKIIFLMPLVVGTVHNLFAMSIAQKFIPRSLLVPIIITLVIYFIGYFI
YYFLTLKYALNMIKE
>gi|260686747|ref|YP_003217880.1| putative gamma-glutamyltranspeptidase [Clostridium difficile R20291]
MKFNAYQHKYSSIRNVVYAKNGAVATSTPLASQAGLEILKKGGNAVDAAVATAATLAVVEPTSNGIGGDA
YALVWIEEEKRLYGLNSSGFAPENMELKNYNNMKEMPKYGFGAVTVPGIPAAWSELNKKYGKLSLMECLS
PAINYAREGYVVSPNVAKVWKKSYELYEKELIGEEFKPWFDTFSKDGKAPEAGDIFICEEQASTLEEIAN
TQAESFYRGRLADKIDEYSKKFNGAIRKSDLECFYPTWVEPISTEYKGYKIFEIPPNGHGITVLMALNIL
KELELEGNIENVEDIHKIIESLKLAFADSKTYVTDIEHMKVKIQELLSQEYAKKRSLLIDNKEALYPTAG
EPYCGGTVYLCTADKDGNMVSYIQSNYINFGSGIVIPRTGIALHSRGNNFNLDPKHHNVVKPFKKPYHTI
IPGFLGKEDKAIGPFGVMGAFMQPQGHIQVLTNMIDFGLNPQEALDAPRWQWIKGKEIEVEPEMPKHIID
SLIEKGHEIKVIHDTVDMGRGQIIFKTEQESYICGTESRCDGHIAVY
>gi|260686748|ref|YP_003217881.1| putative 3-mercaptopyruvate sulfurtransferase [Clostridium difficile R20291]
MKNIISAKELISKLEKNDNLVVIDCRFDLINRTYGIDSYKKGHIKGSFILDIDKDLSSPTKEHGGKNPLQ
DPLILKEKLEKMGVDNDTTIVTYDDGDLNGACRLFFQLKHLGLKNVYVLDGGITSFVKEGGELEEKVNIP
SCTGKEIRPNINNDLVVPMEYVKSKLYKKDTVIIDCRANERYQGLVEPAYSKAGHIPSAKNYFCKDLIKS
DFENGSLKDIEFLKKFFKDLNNYDEVILSCGSGISACVNSLALRELDIPHKIYIGSFSDWISYDDNEIKT
GQE
>gi|260686749|ref|YP_003217882.1| putative dehydrogenase, electron transfer subunit [Clostridium difficile R20291]
MENSEMSNKIVSKRQLTDSIYLMEIEAPRVAKSSQPGQFIIIKNDEKGERIPLTIADYDREKGTVTIVFQ
TVGASTKKLAMFEENDFVMDFVGPLGQASEFIHEDIEELRNKKILFVAGGVGSAPVYPQVKWFKEHGLDV
DVIIGARTKELIILEDDMKKVAKNVYVSTDDGTYGFNGRVTDLLKDLVDNQGKKYDQAIVIGPMIMMKFM
CQLTKELNIPTIVSLNTIMIDGTGMCGGCRVSVGNETKFACVDGPEFDGHLVDFDQAMRRQSMYKTQEGR
AILKLEEGDSHHHSNCGCGGNK
>gi|260686750|ref|YP_003217883.1| putative glutamate synthase [NADPH] small chain [Clostridium difficile R20291]
MDAKKVKVPVREQEPAVRATNFDEVCLGYNKEEAMAEANRCLACKKPKCVGGCPVGIDIPGFITKIKEDD
IEGAAKVIAKSSSLPAVCGRVCPQESQCEGVCILGIKSDAVSIGKLERFVADWSKENDINLSDTEPKKNQ
KVAVIGSGPAGLACAGDLAKKGYDVTIFEAMHEPGGVLTYGIPEFRLPKQAVVQPEIDNIRKLGVKIETN
VIVGKTITVDELIEDEGFEAIFIGSGAGLPMFMNIPGENANGVFSANEFLTRVNLMKAYRDDYDTPISSG
KKVAVVGGGNVAMDAARTALRLGSESYIVYRRSEKELPARAEEVHHAKEEGIIFNTLTNPKEILVDENGY
VKGMVCIRMELGEPDDSGRRRPIEIEGSEFVLDVDTVIMSLGTSPNPLISSTTKSLNINKKRCLITDENG
QTSKEGVFAGGDAVTGAATVISAMGAGKTAAASIDEYLKTKVNA
>gi|260686751|ref|YP_003217884.1| putative signaling protein [Clostridium difficile R20291]
MKKREKVFDGLVFKHILILLILLVLIDLTSTIIYASNSMEITSRNMIEASKRELENYLEVNISLLKALSQ
DDRFSNGETSLIEKGKLLRPYQKEYNLFMIGITDTKGNASSTYRENVNSIKDKPSFEKAIKTKQVVVSDI
EVSNVTGDKVFIIYVPIVKNNEMIGTIFASFYFQDVNNLISRSNFDDSIKFLMIDKDYTIISHPNKKYVN
DKSKMLDLEGNIIGTTKSEILKNINKKCQGDFLSWDNWRLYNVKYTNIKWTNWTLVSKCNIFKNFKNLIV
NFMIKLYFYIVIFMILWKLSNAKLIEQLKKLAYYDSLSGIKNKEKFRKDSMYILKNYYQDNFYLVQLDVN
KFKYINEMFGYAEGNKILIHISQVLNNNTNKYEICARMDNDHFILLIACNTEDELLNRLSKINKEICNLN
TTNSSKYKIVMSSGIYKITKKDDIKKIDLLIDRANIAAKSKKEKYEHSYSFFNEDTRNRLYKEKRLEDNM
NKALEKGEFIVYYQPKYSLDDVNEIEGAEALIRWNSPEFGFISPIDFVPLFEKNGFIVNIDMFVFEEVCK
TLNKWINKGYTPVPISVNMSRVHLYRDNFIENITDLISKYNISPEFIELELTESVVFDNLNILIDIMKKI
KEIGFLISMDDFGSGYSSLNLLKDLSFDILKLDRGFLIETTDTKRGKIIISKIVEMAKAIDIKVICEGVE
TYEQVEFLKEIGCDKVQGYLFAKPMVLDEFEKHLNFKFD
>gi|260686752|ref|YP_003217885.1| ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MVKVVYSRYYGIVVKIKNYGEYKMNILSIRNISKTYCGNIPFKALDKVSLNIEKGEFVSVMGPSGSGKST
LLNIISTVDRQSEGEVVLDGYDVSKLKGEKLAEFRRKQLGFVFQDFNLIDTLTVGENIMLPLTLEGASIK
DMNIQTKSISKFLGIDKILDRKTYEISGGQAQRCAIARAIINKPTILLADEPTGNLDSKSTDDVLKLFTR
INKEQNVTTLMVTHEVYSASYSDRVIFIKDGCIYTEIKKSESSNSFYSDILAVLSQIGGVR
>gi|260686753|ref|YP_003217886.1| ABC transporter, permease protein [Clostridium difficile R20291]
MDFRKFAYNNIVRNFRAYLAYFLSSVFSIMIFFVFAVSMFHPIITKSGMQSGSTAFMALMTSELTILGFS
LLFILYSLGNFLKYRLKDFGVLMIIGMSNRQLKKLILIENLIIGFLAVMLGILLGLSISKLFLLYLSKLF
YMNLTEIYFPVKAILLTIVSFMILFLITGPMSLKLLRKKSILELLVGTKKPKKEIKSSRLFGIIGVICLI
LGYAMILFGNKLKINGGMYTTALLITLGIFLFFSQFTILILKYLKNKEKFYKNKVNMLLISNLIYKLKDN
TRLLFLITILLSATLVAFTTTSTLVSSQGEASKNNFPMVYSYFSEHNNEKEYEELQQIREAIKGYDYKEL
SFPVLKYNREVLLSVKNYNKLSKELGLDKISSKLEKYEGIIIPSSNSQEHINSLKQLKNYSIKNLNIEVK
KSKNKIIFPTGLFSKVVVISDDLYDEVKGEFSKINFHGFDYKNWQSSAKITENLKEKHFNLDREYNRSYF
LTLPDMYLVELQQSKILQFMGVFIGVILFIAVFSFLYFRLYTDEIEDNVKYKKLSKIGLSFKNMNKIVSI
EIGTLFFIPYFIAIINSIISLLFLNQVLNNSFRLENLGILLLISSIYSLYFYLLKKIYTRKVWFFD
>gi|260686754|ref|YP_003217887.1| putative drug/sodium antiporter [Clostridium difficile R20291]
MENQQLLGTERISKLLLKYSIPAIIGMLVNSLYNVVDRIFIGNIPGVGPLAITGLGVTMPIMTIILAFGM
LIGIGTTTTISIKLGQGKVEEARKLIGNAMTLSVITGIIIMILGILFANKILTLFGASENTLIYAKSYIN
IILLGTVVNLLSFSLNHSIRADGSPKISAGIMIVGCLTNIVLDWILIFGFNLGIQGAAIATVTSQALTAI
LTIGYYISGKSNLRFSKSNLKLDKKLIKAVFAIGMSPFAMQLAASLVQVISNIALKTHGGDLAIGAMATI
SSIAMVFLMPIFGINQGAQPIIGFNYGAEKYDRVKKAYLGSLVVATIILCMGMVVVMLFPEAIIGIFNKD
PELMNISVNGLRIYLLMLPIVGLSVTGTNFIQSIGKAKMAMLLSLLRQVILLIPAVLILPTFLGLQGVWT
AQPVSDFIATVITGIVVFRELKRYTPKTEKLNENERLNEITTE
>gi|260686755|ref|YP_003217888.1| hypothetical protein CDR20291_1391 [Clostridium difficile R20291]
MEFTKKSKLKNMYVNMNVARMLSKINEYKGRQLLYKKQPKEILENLEKKSLVDCSESTYIGNQRDSSNFN
LEKLISNEVTPRSREELSIVEYRDVVKTINSAYESIPISSQTILELHGYLYKFSSTRGGSYKSDNDFIEH
NLKPSEFISIDSSVNKVEKAVEEICEAYNTLIEEDEIDILILISAFVLDFILIHPFKEGNIKMARVLILL
LLNKNGYEVGRYISLGKIFDDSSYEYYSNLNYLKASIGSEKADMNAWIEYFLETILTAYEKLDDSLNISD
KKRQTKTSRIEKIINSTLGYFTKEDIRDLCPDIPEPTINRVFNNLRKQDKIEVVARGRSAKWKKKY
>gi|260686756|ref|YP_003217889.1| putative acyl carrier protein phosphodiesterase [Clostridium difficile R20291]
MKKKLLYINVNSKPEDLSSSKTVARKFINKFMEKNKDFEVEEIDLYKEHIPRLEYQYFEKRNSIVSEENA
KNLDDKDRKELTKIRNLCDQFVSASVYVIAAPMWSLSFPAPLKEYIDCIIQDGKTISFEGNDKPQGILND
IDRSMVYIQSSGGHIPWVLKPVMNKGLNYVESIMKFIGIKKFDELLVDGTGTSEEERQAAIEKASEKIHG
IIDGMKF
>gi|260686757|ref|YP_003217890.1| hypothetical protein CDR20291_1393 [Clostridium difficile R20291]
MREEKSNEKYDCYWCNQENNFCVEIKDNIVMIDDGTGTLKQAVFIGYKQIQINLNCSHCQNLNRIKLNL
>gi|260686758|ref|YP_003217891.1| hypothetical protein CDR20291_1394 [Clostridium difficile R20291]
MMNNELNTIILETLNNADITSNDIPSIDLYMDQIISLIDNKLSPNKRFESDKILTKTMINNYSKEGLIKP
VKGKKYTKEQILQMIIIYSMKNTLTIQEIKRILHGVYEKDNFSEKDLVSCYEKFMLIKENQRKNIPDFIE
SNFENISINPENKDDLLIALLSLTSMADQLKNISEKLVDRYFPDITKK
>gi|260686759|ref|YP_003217892.1| putative hemolysin-like membrane protein [Clostridium difficile R20291]
MYQFFLKGRDPISSLTHFIGACLSLLATIILVFQSVTLQETSLLMIVSVSVFGLSLIALYSASSYYHFLK
GTPEQELFFRKVDHAMIYVLIAGSYTPICLNFMEKKEGIIFVTAIWIVAFIGIIIKIFWMDAPRWLSTSI
YLLMGWAIVFDINAFNSIPKDCLRLLIMEGVSYSIGAIIYIIKKPNISPEFGFHEIFHIFIMIGSLFHFL
AVLLYVL
>gi|260686760|ref|YP_003217893.1| putative ATP phosphoribosyltransferase regulatory subunit [Clostridium difficile R20291]
MKFLRIEDEVIYSKKRYKLKREIDKLFLDEEYFQIEPQLFEEYDEFTTINNKIPEESMVKVVNGKVMVLR
ADITTSIIKSLVPRWEDGLKLKLFYNSSIYKNKNTVGIKEIRQIGCEYLGEASVEADREVVKLALKILEK
YNNNFILEVGSSKYIHGLLEELNLNKNCENQIKNLLYTKNTHELKVYIEELKIKREVKELLSNILSLQGN
LYNVIEKSNKFYCNNKMKQALEELKQVNNLIEECNFLDKARFDLSMITMLDYYEGIMFRGYYPNSYKEIL
SGGRYDSLTKEYGKEIPAIGFTLSVDELMKYVYK
>gi|260686761|ref|YP_003217894.1| putative ATP phosphoribosyltransferase [Clostridium difficile R20291]
MDYLTIALAKGRIEGESFKKFKKMGLGDSIDTDTRKLIFKDEENKIIYIHVKPSDVVTYVEKGVADLGIA
GKDTILENETDVYEIYDLGFGKCKFAVAGLKGDSIYREDEYLKVATKYPNIAKKYFKEKGQKIEIIKLNG
SVELAPIVGLSDVIVDIVETGNTLKANGLEILEDICNISARIISNRASYRFKYEQIQNIIRLFEELDN
>gi|260686762|ref|YP_003217895.1| putative histidinol-phosphate aminotransferase [Clostridium difficile R20291]
MREKESIRELRGYEPNHVNCKVKLDANEGSKRLFKYLIKEISDSDIDLNLYPEDSYSDLKESIIDYINIS
GVNKKNLLVGNGSSEIIDLIIHTFVDKDEVILSFSPSFSMYSIYSQINGSKFIGVESDENLVINIDNVIE
KVKENNPKIVIVCNPNNPTGTILKREEIIKLLDSTNSLVVLDEAYMDFGEESMLSDVFKYDNLIVLRTLS
KAFGLAGIRTGYMLSNSSLINSVEKVRPPYNLNSLSDFIATRALRNKDVVKAYIKEVKEEREVLYEEMIG
MGIKAYKSQANFILFYSEIENLSQKLIDRGVLIRKFGGKLENYYRVTIGDKEENSMFVGAIRDILKKEK
>gi|260686763|ref|YP_003217896.1| imidazoleglycerol-phosphate dehydratase [Clostridium difficile R20291]
MRIWKVERNTFETQILVELNIDGSGKAEIDTGIGFLDHMLTLMSFHGKFDLKVICKGDTYVDDHHSVEDI
GIAIGEAFKNALGDKKGIRRYSNIYIPMDESLSMVAIDISNRPYLVFNAKFDTQMIGSMSTQCFKEFFRA
FVNESRVTLHINLLYGENDHHKIESIFKAFARALKEGSEIVSNEIASSKGVL
>gi|260686764|ref|YP_003217897.1| putative imidazole glycerol phosphate synthase subunit [Clostridium difficile R20291]
MNIIVDYGLGNIDSVSRGFRKAGIETKISSDIDEIKQADSLILPGVGAFRDSISALDKLGLIPIIKEHVS
KGKFMIGICLGMQLLYEKSYEYGEYEGLGLIKGSIDKLDITLKVPHMGWNNLKFNKANDDILKYINEDDY
VYFVHSYYANSSNEELVAFSEYEKKIPAIVRKGNVYGIQFHPEKSGEVGLNILRAYGEMIK
>gi|260686765|ref|YP_003217898.1| putative 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methyliden eamino] imidazole-4-carboxamide isomerase [Clostridium difficile R20291]
MIIFPAIDIKDNKCVRLTQGEFDKVNVYYDNPLEVAYKWKNEGAEYIHIVDLNGARSEFGINTKIIEDIA
NNIDIPIQVGGGVRDKGKVKSLINAGVTRVILGSIAIENLNLVEELVNEYKEKIVVSIDAKDGKVAVRGW
EVVSDVDSLTLCKQLEKIGVQTIVYTDISKDGMLQGPNFDIYERIAKETSLNVIASGGVTSIEDVKRLKA
MNLYGAIIGKALYDKKIDFKEAQQLCLLGE
>gi|260686766|ref|YP_003217899.1| putative imidazole glycerol phosphate synthase subunit [Clostridium difficile R20291]
MLTRRIIPCLDVRNGRVVKGKKFKDIVDVDSPEVLGKFYSDCGADELVFYDITASNEERKTSLEFVTKVA
ENINIPFCVGGGVNKLEDFTDILRKGADKVSINSSAVKNPELIREASLKFGAQCVVLSIDAKKNEEGSWS
VYVKGGREKTNLDAIEWAVKGVELGAGEIVVNSMDEDGMKNGYDIELLSKITSLVNVPVIASGGAGKKED
FYEAVNKSNVDGILAASVFHFGEIKINDLKKYLKNMGVEVRL
>gi|260686767|ref|YP_003217900.1| histidine biosynthesis bifunctional protein [includes: phosphoribosyl-AMP cyclohydrolase and phosphoribosyl-ATP pyrophosphatase] [Clostridium difficile R20291]
MDNKCNNVYSDEVEEFIRSIKFDDKGLVPVVVQEVVSKDVLMLAYMNKDAIKKTLKDKVACYFSRSRQKL
WVKGETSGNTQKVVKMSYDCDVDTILLFVEQTGVACHTGNYSCFYRDLFDDSSKMEPEVQTNILKELYDL
INERKNNPVEGSYTNYLFEKGIDKILKKVGEESSEVIIASKNTDKSELIYEISDLVYHTLVLMIEKGVEI
DEIKKELLKRRK
>gi|260686768|ref|YP_003217901.1| putative amino acid permease [Clostridium difficile R20291]
MRRKRMGSNELKKTLGVSAALSTVVGSVIGAGVFFKPQAVYTLTGGAPGLGILAWLIAGIITITAGLTAA
EVSVAIPKTGGMMVYIKEIYGDKLGFLTGWMQIVLFYPGMMAALGVIFGEQASALIGSPSLLLPIAIGII
VIVAGLNMLGSKTGGVIQTVSTICKLIPLILIMVVGFIKGGGNNPILTPMVGEGLSLGSVLGQVLIAILF
AFDGWMNVGTLAGEMKNPGKDLPKAIIGGLSVVMAVYFIINLAYLWVLPANELANYASPASAVAEVIFGS
MGGKIISVGILISVFGALNGFLLTGSRVAYTLATDKTLPKYGIFSKLNSAQVPANAIALVSVIASIYALS
GQFNLLTDLAVFATWIFYVLTFIGVMKLRKTHPNIPREYKVPLYPIVPIIAIASGIFVVVNQLCFAGMKT
TMISIGGLVITAIGLPVYAYMTRGIKR
>gi|260686769|ref|YP_003217902.1| putative polysaccharide deacetylase [Clostridium difficile R20291]
MRNKKKKINRKKLYLLLSAIVVCLAFIVVGVRVSSLNMKENEISRNAKLSSSTITDIVSNTSIEVSKGPS
KSSGKIAYITIDDGPSKFTDEMIKTLNKYNVKATFFMIDGNMKEYPQQVKNIIKNGNTAGFHSVSHDIHK
LYVTSTSAKEEFDTNDQTFYKITGKHSKVIRIPYGSKPYTPQASYQALVDAGYKIWDWDLDTEDWRSNSS
QIVQNVKNHIKNRKGEDKDQLVVLMHEKKQSAEALDSVLKFLSDEGYEFAPVDQNQIPKNYWLRNLE
>gi|260686770|ref|YP_003217903.1| putative peptidyl-prolyl isomerase [Clostridium difficile R20291]
MVGILSLMMVGCNKSLAKVNDVEITKEQYKKTKAVLSATNNYINGQSLDELEKTLDKKGRNKLENVIISF
MVDNELLYQEAKDKGLTPSKSEVDSKYQELEDKMNLNTSYKEKMDKAGVDKEYLKQEISRDLAIDKNKKA
FEDRINISDNDMEAYYTSHKKDFNVEEVSASQILISTLDKNKKEVSKDKKEALKKKADNILTKIKNGESF
ESLAKKYSDDKATGKNGGQLGYFTKDDKNAEFTKEVFKLKKNEVSNVFETSYGYHIVKVTDKRERQKSFN
ECQSLIRESILNEKYIEHIKKLNEDAKIDR
>gi|260686771|ref|YP_003217904.1| RNA polymerase sigma factor [Clostridium difficile R20291]
MFKSLKRTKVEKYIIDNKDSFYRIAYSYTKNEEDALDVVQEAMYKALYSVENIKEVNYIKTWFYKILVRT
SIDFIRKNRKYNNMTDIDLIDETGEYDKYTDLDLRRALEELPIEYKSIIILRFFEDLKIEEVAIILDENV
NTVKTRLYTALKKLKLKIEE
>gi|260686772|ref|YP_003217905.1| hypothetical protein CDR20291_1408 [Clostridium difficile R20291]
MTSKERLNKLKDEYHKIPIPKKLDTIINHEKIENIYREKNKKVNRLRFKVAIAFACIFTVLVNISPVFAD
NFSKIPVIGVIVEVITIKNYSLKSENYEAEIDIPKIRGLKDKNLEQRLNSSFMEDGKRLYHQFQERMEKI
QSSKNKGYKSLSLSYSVKNNSKKFLSIEMTKNEIEASSYVSKAHYTIDKKRQIVLTLPMLFKDDKYIKVI
SDNIKEQMREQMKKDSTKSYFIDQKKDLPVEDFKTINKYQDFYFNKNEDLVICFDEYEVAPGYMGAVEFV
IPYKVIKDL
>gi|260686773|ref|YP_003217906.1| hypothetical protein CDR20291_1409 [Clostridium difficile R20291]
MTTYKKLKKSIFKISIFSICLLVSLVDINPIFAGSSSNETSNSDTIKVLNAKSLNFKQGNYEVNVSIPKI
KGLKDKTLENKLNNEFLQDGKKIYSEFQNKMKKENNKGHRYLNVIHNVKNNSKDFLSIEMTKEEIEDSSS
ITKKHYTVDKNRGILLNLPIFFKDSRYIRAISDNIKEQMRNQIKKDDTKSYFIDQDKDFPVKDFESINKY
QDFYFNKNGNLVISFEEYEVVPGYMGAVEFVIPNKVIKRLR
>gi|260686774|ref|YP_003217907.1| putative dehydrogenase accessory protein [Clostridium difficile R20291]
MNIYEQAIRLIENNEDFAFATITSHSGSTPRETGAMMIVKNDSTIFGSVGGGSVEAECIKHAINVIKNRE
SMLYKFTLNKSDVAKLGMICGGTGEIQIDFIDSKLKSNIEKFNKRLKENTSKAYIFGAGHISRDVAVILS
LLEFRTVVIDDREEFANYERFPESEVVVLDSFENIPDFPTDENSYIIILTRGHLYDSSALEWALKRETGY
IGMIGSRTKIGLTYEKLMKKGFKKEELSKVHAPIGIKLNAQTPAEIAVCIAAELINCRANKEK
>gi|260686775|ref|YP_003217908.1| hypothetical protein CDR20291_1411 [Clostridium difficile R20291]
MNTGSKDIDTLNVNFRGIEIKAVLVYKNRKNISIKIDPFGKIIVMSPPKISKKIIKDIIIEKGDWILKKS
EKYKGREEVYKQRMFITGEKFLYLGEEYHLVIKELLKDSVKKSNCRITINEYQIVVQTNDTSTDFIKKSL
KSWYKMESERTVLERIDFLKLNCEIMKQLVPASVKVKEQNKRWGSCTAQKNIYINSKISMARLDVIDYVI
IHEFSHLVHMNHSKKFYDLVKSIMPDYKDKENWLKINGYKIII
>gi|260686776|ref|YP_003217909.1| hypothetical protein CDR20291_1412 [Clostridium difficile R20291]
MENTVYAKLNQGIDSFLRVAMTLRRREVDIQSISMTVDNMNNSGIKLIVNEEKTSLDSVLNHMKKLHDIR
EITVERMRH
>gi|260686777|ref|YP_003217910.1| ketol-acid reductoisomerase [Clostridium difficile R20291]
MKMARMYYEKDVDLEVLKNKKVAVLGYGSQGHAHAQNLRDNGVHVVIGLYDGSKSAQKAKEDGFEVKSVA
EATKESDLTMMLMPDEKQKKVYEESVKDNLKEGQTLAFAHGFNIHYNQVQPPEFVDVVMVAPKGPGHLVR
NVFTKGSGVPALFAVYQDYTKKATETVLAYAKGIGATRAGVLETTFKEETETDLFGEQSVLCGGISELIK
LGYKTLVDAGYQKEVAYFECLHEMKLIVDLIYEGGFERMRYSISDTAEYGDYVSGKRVITDAAKQGMQNV
LEDIQNGKFAKAWIKENEEGRENFLKTREEEYNTEIAEVGRNLRSMMSFLK
>gi|260686778|ref|YP_003217911.1| putative acetolactate synthase large subunit [Clostridium difficile R20291]
MNGAKVILECLKKEGIDTIFGYPGGAVIPLYDALYDYSDDFKHIRTSHEQGLVHAADGYARSTNTVGVCF
TTSGPGATNAITGIATAFMDSSPMVVISGQVPTSLLGKDSFQEIDITGATLSMTKHNYLVRNTKELVPTI
KEAFRVANSGRKGPVLVDVPKDLFLAEMDFSGEDYDLCQIDDYMDYKSDFDLDDETNIKLLNEAIDIIKE
SKKPVIYAGGGVKSSDSEEILEKFATKIDTPVLNTLMGLGNIDRKNELSLGMVGMHGSRESNLALSNSDL
VIAIGARFSDRVISKSSEFAKNAKIIHIDIDPSEISKNIESNVSLVGDVKLVLSLLIERVESKNNSNWKE
EIKTFRKSEGVQTYEFHPQNILKKINEKYETLKKPTVVVTDVGQHQMWSAKYWNFKGNKSFITSAGLGTM
GFGLGAAIGTKAGNVDKNVVLVTGDGSFRMNCNELATVANYNVPMLILLLNNRTLGMVRQWQKLFSNQRY
SQTDINENVDYVKLVNAYNIDGYKVSNMEELGKVLDVIDFNKPVFLQCDIDKDYDVYPIVAPNDALENLI
CN
>gi|260686779|ref|YP_003217912.1| prophage lambdaba04, site-specific recombinase, phage integrase family [Clostridium difficile R20291]
MKGGVRKRSNKWYYYFDLGIVEGKRKKVERVGGNTKKEAEKALREALNEYENSGIVFEESNISLSDYLDF
WYKEYVLLNCKYNTQESYRINIEKHIKPKLGAYKVKALTPAILQNFINKKYKEDYSQNTLQVLKAILHRS
LKSAVHPYKHIRENPMQYVSIPKTKSKTETNKVKTITLEEFNQILNIFPQDSFQRIVLLIGFHTGMRRGE
IIALKWDNIDLDNKTITVKHTLIKKPNGMFELGQPKTESSCRTIFTGDTLIKALKEHKLYQKKMKLKYGE
FYFDSDWVCTKENGQQVNTHTLDTIVRQIRVALNNDFHFHSLRHAHATLLLENGANIKDIQNRLGHSQLS
TTMDTYSHVTDKMKNETVDIFEKITN
>gi|260686780|ref|YP_003217913.1| hypothetical protein CDR20291_1416 [Clostridium difficile R20291]
MSIKNGKDFLYVIWKDPKSRRQFIIGKLAKNGLYEFSYEYEIDEAIKAGFNALISFDDISKTYYSEDLFS
PFASRLPDKKRKDINKILDKYDMSEYDTYELLKRSGARLPIDTLEFVDPIPLDIDKNIIRYFYIAGVRHY
AGCEGHECDNSIELESNEALVLELEPENKFDPHAIKVFDKKENHIGYIPRYYSGELTSIINRGLKYNCII
KFVNKENNCDECIKVKLEILFDEYN
>gi|260686781|ref|YP_003217914.1| hipa-like [Clostridium difficile R20291]
MIKNFDEWKEYDGFSYGSGRSEKIWLINEKTKDIGLFKFPKTKETGEYWAEKLACEIASLLKIPCANVEI
GTYNKRIGSMSYLINKNDEKLIEGVWLINKYYPCYNTDKLYDYKNNEYYSLKMIFKSIEEYNIKNDFLKM
LIFDYLIGNRDRHQNNWALLESQNKITLSPLYDNGSSLCCYVNIENIDSFFTDHQRFEALINTRSRSRIR
IDGKNKKEPTHLEVLKYLNSNYYEQTIDFVEKIINLMNEVNINTLIDNYSENIISPKLKKLLKIYLKEKV
LRIKNIYNL
>gi|260686782|ref|YP_003217915.1| putative phage-related protein [Clostridium difficile R20291]
MNKLDALLDLANNEEIEIYYTDKIADDIKGLYINRQGLKIISLLNSLKQNNAKLIEILAEELGHHFTSVG
NYVSSKNSYKNKILIDKTENKALKWACEFLITEEEIIHVINSHATSVYEIAEELQVSINFLLKRLEFLSK
KKSMLDLGNNRFLVLTNLPNFYIYEDIF
>gi|260686783|ref|YP_003217916.1| hypothetical protein CDR20291_1419 [Clostridium difficile R20291]
MNNLQIFKNKTFGEIRVIELNGEFWFVGKDIAEQLGYKDTSDALKRHVDDEDKGVGEIPTPGGNQNMKVI
NESGLYSLILSSKLPSAKLFKRWVTNEILPSIRSTGTYNMIDLQTKLPTTYKEALQHLIEQVEVNEQLQL
ESKMKDQVIKELKPKADYTDMILKNKGLVTITQIAKDYGMSGKEMNKILHERGIQYKQSGQWLLYKQHQG
KGYTHSETIDITRSNGMPDVKMTTKWTQKGRLFLYDLLKTNNILPDIEKGYSYQTSILG
>gi|260686784|ref|YP_003217917.1| hypothetical protein; hypothetical protein [Clostridium difficile R20291]
MVEVNVNVKVKVEAPEFTNALLVVANALGGLNLGKAMQIEPINITDMKEEKKVEVKKAEKIKKVEVKEDV
KEEIAEAKEEIEKNNENTTSEVKYTKEEVRTKAAQVSKAGKKDKLKELFGEFGASKLSEVKEEDYSAFMN
KLESL
>gi|260686785|ref|YP_003217918.1| hypothetical protein CDR20291_1421 [Clostridium difficile R20291]
MPLQHARLSASGAHRWLHCTPSIKLEENYPPLTSIYAEEGTVAHELAEVKLMLEYEKISKKAYNARIKKI
QKSEYYNSEMEDYIQSYVENVVELVNDSKAICDDVIVMLEERLDFSEWVPEGFGTGDVVVISDGILQVID
LKYGKGLEVSAIENPQLRLYGLGAYNQFEMLYDIDLIKTTIIQPRLDNISSEEIEVTKLLTWADNVKKKA
QMAFNGEGEFVSGSHCGFCRAKNDCRKRAEDNLKLARKYDFADTFALNKYEIADILGFAKNIQDWLKDVQ
SYALEQAEKHGVKYPGYKLVEGRSNRKYVDEQEVAKVLLNSDYDEEKIYKPRTLKGISDMEKAIGKKSFA
KLLSDLIIKPVGKATLVVESDKRSEINSIDSAKKDFEI
>gi|260686786|ref|YP_003217919.1| hypothetical protein CDR20291_1422 [Clostridium difficile R20291]
MSNQEITKLVENNLNLVHFSINRFFKSYVEQHPYLYEEFYQEGCIGLYKAALNYDSNRGKFSTVAVSYIR
IEMFKALRYGEKHYRNSIEGLDVSVFEDSKRPLKDIHGFYEIQFNYDVDYIRKIARKSYLKDIDKIVDWI
LQDKKISDIGELLNVSSTVICGRIKLFSKQVRDLDKFGEITSNIKSIYQI
>gi|260686787|ref|YP_003217920.1| hypothetical protein; hypothetical protein [Clostridium difficile R20291]
MSNSVQSTKVVTGKVRLSYCNIFKSRAMVEGAEPKYSVCILIPKSDKVTLGRIKKAIDAAKEQGKTSKWG
GKLPGNLKTPLRDGDAERADEAEEYVGMYFLNANSTQKPGIVDKDLNEILDNTEVYSGCYGRVSINFFPY
NSAGNKGIGCGLQNVQKLADGEVLGGARASAEADFSDDFEYEDEEEDFLS
>gi|260686788|ref|YP_003217921.1| dna-directed dna polymerase i [Clostridium difficile R20291]
MRTLSIDIETYSDLDIKKVGVYRYVDSANFEILLFAYAFDNEEVKVIDLVNDEELPKEVIEALNDNKVIK
SAFNANFERTAISKFLNINLKPNEWSCTMIKALTLGLPGSLDSVSKALKFNEDKQKMKEGKALIQYFCKP
CKATKVNKGRTRNLPIHDMEKWNKFKEYCKQDVVVEREIRNKLSKYKTTEREIKLWYLDQRINDTGIKVD
TELIENAIECDKRYTEKLTKEAIKITGLNNPNSPAQLKKWLSDKVGFEITSLTKESIPEILKQVDDENVV
RILELRKLMSKTSIKKYEAMKLAKGNDNRVRGLLQFYGANRTGRWAGRLVQVQNLPQNHIEDLDLARNLL
KEGDFDLIELLYDSVPDVLSQLIRTAFIPSEGHRFIVSDFSAIEARVIAWFAGEKWRLDVFNSHGKIYEA
SASHMFKVPIESIKKGDPLRQKGKISELALGYGGSIGALTSMGAIKMGLDEEELQPLVTTWRNANPNITK
FWWDVDKAAKKAIKDRTIVKLQHGIKFIYNPGVLFIELPSGRRLSYLRPKIEPHTTFSGDKITYEGMEQT
SKQWKRIDTYGPKLVENIVQATARDCLREAMFNVTDAGYSIVMHVHDELVIDVDKKGGSLEEVNSIMGKE
ISWAKGLPLKADGYECDYYKKD
>gi|260686789|ref|YP_003217922.1| putative virulence-associated protein e; putative virulence-associated protein e [Clostridium difficile R20291]
MDIKASEIEHINVRHDGQLMLAIGKNKLETHWKNKSILWSELVNRLSKTLRTQETYTEYRKMSKTEKDRV
KDVGGFVGGSLKNGRRKAENIANRSIITLDIDYANKDIWEDITLLNDYACLMYSTHSHTENNPRYRLVIP
LTRPVLPEEYQAISRMIADTIGIDMFDDTTYQPHRLMYFPSTSIDGDYIFKFQDGEFLNPNEILDLYLDW
TDVSYWPESSRERQKFNTQLKKQQDPIEKAGIIGAFCRSYSIKETIENFLNEVYIPGIDETRYTYSEGST
SGGVVIYDDKFSYSHHGTDPASGILCNAFDLVRIHKFGELDEDAKPETPVNRLPSFTRMSEFASSDTKVR
KTIGRENLDKAKDDFGDIDFEDDEWLTRLDYDNKGSYKKTTNNILMFIENDPYLKGKIAYNEFSNRAVVL
GKLPWRKDDKLNDWNDSDDSGLRHHIETIYNISSPSKVNDALIIAFENNTFHPIKDYLNSLKWDGIKRVD
TLLIDYLGAEDNHYTRTIIRKVLVAAVARVFNPGIKFDNMMVLSGPQGMGKSTFIKKLGGDWYSDSLTTV
QGKEAYEQLQGVWLLEMGEMMATKKADIEAVKHFLSKSEDIYRVAYGKRTSRFLRQCVVIGTTNDKEFLR
DKTGNRRFWPIDTGVKKVNKSIFNGQLDNERNQIWAEAVELCKANEQLYLSDEEKKEAERQQRTHSEENA
KSGIIEEYLNKPITENWYDLSISEKREYIHGSDFGDLKEGTILREKTCVMEIWVELFNGEPKQLTPILSR
EINDILKGLDDWISYNGNLRFGKIYGRQRAYVRKS
>gi|260686790|ref|YP_003217923.1| snf2-related protein [Clostridium difficile R20291]
MEFKPHPYQEYTIRKTIDNNNIGLLLDMGLGKTVCTLTAISELMYDYFDISKVLVIAPLRVARDTWSSEV
KKWEHLKHLKVSKVLGSKLDRVRALSTDSDIYIINREMVPWIVDFYKRKWPFDMVVIDELSSFKSNKAQR
FKSLKKVLPLTKRVVGLTGTPTPNSLIDLWAQMYLLDRGERLGKTITGYKERYFEPGQKNYQTGAIYNWQ
PKNGAENAIHNKIKDICISLKAEDYLNMPRKIDNKIEIHLDSKILKYYKELEKEKILELDRDIITASSAA
VAANKLLQLANGAIYDNDKNVKELHREKLEALKEIIDVSNGKPIIVFYNYKHDYNRLMKEFKSLKPRTIE
NSKDIYDWNNGRIQLLLCHPASTGHGLNLQSGGSIIVWFGLTWSLELYQQANARLYRQGQRETVIIHHLI
CKGTIDEQVMEAIENKDKGQSALLEAVKAKLKEYRE
>gi|260686791|ref|YP_003217924.1| hypothetical protein CDR20291_1427 [Clostridium difficile R20291]
MDKESIKEIVRELRKEEREDRKKGVLYNTRLLMKHYNDFKRHIDSAVSEAKDVDYLEDDLGKLDNEELYI
LSIKKSKARTIIMIAHIDSAMKTLKLRQERLHSYEKYRALELYYCDEKTYEEIAEILNCGVVTSRRWINE
MVKELGVYLFGIDGLKLTV
>gi|260686792|ref|YP_003217925.1| bro family, n-terminal [Clostridium difficile R20291]
MLKILQEKNVRMIWSKNGEEVWFNANDVGEELGIVNIRDTLRNIDREYKKKFNESTVGDSYTRNFKDKLP
NFGTTFVTEEAVYNMSFRSNKAEAKLFTKWVTKALKQIRIHGYYIATEKDQEWLDIRTEGKRSEKILQMK
YKSFFINTST
>gi|260686793|ref|YP_003217926.1| hypothetical protein CDR20291_1429 [Clostridium difficile R20291]
MSNFKKRYIDVYRIDIINKINGSVYSDEEILKEVIKTFFKDKEYCKENKNGINITKDKKFWITEVKCSED
DLIIKVKLEYTKYNQNTNIINAHTKEVEGNKKMDQGDSNKQHLFIKFMKENNIAVVLFERVFVGVPMIEL
SKNLHLYYEDMIENNKFDNNMSKTSINITQIASKDFIEQILDLDGVSKITLNVDREKFGTDEDNLFSNLN
NSRRHNDLIYKPTFRTRYLPSEVKRCCEKYIKGEEFRNKKINRIIIEGEKNKRKLKLDTEGIKLCREIEV
SLDIDNHIDSEDIFEKMNNLIDDLIENNSVFFNLMYQEVAMSEA
>gi|260686794|ref|YP_003217927.1| hypothetical protein CDR20291_1430 [Clostridium difficile R20291]
MYKKVLNILLNYYKAINSKEVVELVLTPVLICIISYMFFNSSINKEVVISLNKDVLTLSGLLVAFGVCII
TLLFTTYNKSISEAKDIKTERKVNGFNISYFQFIQLKAYYTVIMEILVVVICFINTIMLTRYYSNIIFYV
LIFFTVHIILSLTTLIISMFHLSWKDRGD
>gi|260686795|ref|YP_003217928.1| putative phage DNA-binding protein [Clostridium difficile R20291]
MQDVKEKVKQDYLKGMKQKEISAKYDISLNTLKSWIKRYNWSSEKKKGAPINKRGAPFSNKNSVGYGAPK
ENKNAEKFGFFSKYLPEETRELIQEISIKDKFDILWEQITIQYAAIIRAQKIMYVKDKEEMIKELKKHEI
TENSEKIEYEFQFAWDRQASFLNAQSRAMSELRSLIKQYDEMIHKDWNLATEEQKTRVEKLKCEVANLNK
DDIGDDELKISVDYGDRNDS
>gi|260686796|ref|YP_003217929.1| phage terminase large subunit [Clostridium difficile R20291]
MVIEMIVRINFNPDFKEANFTKKRYRAMKGSAGSGKSVNVAQDYILKLGDKKYQGANLLVVRKSEATHKY
STYAELTGAINRIYGKQADKYWKTTLNPLEIKSKVTGNSIIFRGVNDAKQREKLKSINFSKGKLTWVWCE
EATELMESDIDILDDRLRGILTNPNLYYQMTFTFNPVSATHWIKRKYFDYKNDDIFTHHSTYLQNRFIDE
AYYRRMQMRKEQDPEGYKVYGLGEWGETGGAILKNYVIHEFPTEFEYFDNMRLSQDFGFNHANAILRIGF
KDGELYICNEIYVHEMDTSEIIKIANSRGLEKTLFMYCDSAEPDRIKMWKSAGYKAKGVKKGPGSVKAQI
DYLKQLRIHVHPSCTNTIKEIQQWKWKQDERTGLYLDEPVEFMDDAMAALRYSIDNKLKNNGISFLK
>gi|260686797|ref|YP_003217930.1| phage portal protein [Clostridium difficile R20291]
MLNIYISETDLIKVQLKKESTFNLVKVIEHYILKHRPEKYKQGEEYYYGNTDVNNKRRYYLLDGAKVDDF
TKVNNKAINNYHKLLVDQKVGYSVGNPIVFNADDDNLTKLLNDLLGEEFDDTITELYLNASNKGVEWLHP
YINRKGEFKYVIIPAEEAIPIWDSKRQRELVAFIRFYYIEDIDGNKIKRVEYYTENDVTYFIERGNSFIQ
EFLYDEYGKMTDIQEGHFRINNKEQGWGKVPFIPFKNNEKCVSDLTFYKSLIDIYDNNISTLADNLDEMQ
EVIYVLKEYPGTSLQEFIDNIRYYKSIKVDGGGGVDKLEINIPVEAKKELLDRLEKNIIIFGQGVNPESQ
NTGDKSGVALKFLYSLLDLKCSKTEKKFKKAIRELLWFVCEYLKISGSKSYDYKSVQITFNHSMIINESE
KIDMASKSIGIISDETIVSNHPWVEDVNDELERLKKQEETQKEYDDLIPTNNQEGVIDET
>gi|260686798|ref|YP_003217931.1| phage protein [Clostridium difficile R20291]
MKHKDYWRKRFEQLEEVQNNKSVKYYLELEKKYKLAMNSIEKDILSWYNRFAENEGISLLEAKKLLNTRE
LEEFKWNVEEYIKYGKENAINQKWMKELENASARLHITRLEALKLQIQQHVEVLYGNELDGIDKLMRDIY
TSGYYHTAFNVQQGVNVGWSLMSLDTNRINKIISKPWATDGLNFSERIWGKHRPTLINELHTKLTQSIIR
GENPKNLVNDFAKRFNVSKSQAKNLIMTESAFFASASRKDCFSDLDVEKYEIIATLDLRTSNICRELDGK
IFDMKDYQVGITAPPFHCRCRTTTAPWFEDEEGYRAARGEDGKTYYVPSSMKYNEWYEKHIEGRLGKEKA
DTLRKMQLNESKDRKQFEEYKKVLGNEIPSKFDEYQHMKYNDTIRYEEAKKLYKDVNWQVKNQRNLTSGS
VHSVPFESKPNSVFDNYKDGKLIQRRYYGNTGKPRLDLDLTDHRNPKQHKIVPHKHDWLADENNHDKVKR
EKDMELTKAHKIANKDILNGE
>gi|260686799|ref|YP_003217932.1| scaffold protein [Clostridium difficile R20291]
MDWLKELLEGIKVEDNKIDVASLQKSIEKKIKETTVTQEDYVNLETQLNTANETIKKFEGGMTKEDVENL
KTTYETDKKTLEETYKKEIEEKDFNYWLGDAFKSVKCRDEIALKAHLDMEALRNSKDRQKAFEEQINPLK
QDKDYLFNATLEGEEPKIDTITPGQEPKINDFGFNFTGVRPHENNNK
>gi|260686800|ref|YP_003217933.1| putative phage major capsid protein [Clostridium difficile R20291]
MAALNYAKEYSNVLAQAYPYTLNFGDLYATENNGRYRWTGSKTIEIPTISTTGRVDSNRDTIAVAQRNYD
NAWEPKVLTNQRKWSTLVHPADINQTNYVASIGNITKVYNEEQKFPEMDAYCISKIYADWTALGNTADTT
VLTTANVLEVFDKLMEKMTEARVPENGRILYVTPVVNTLIKNAKEIQRTVNIKDGGTSLNRQTTDIDTVK
IIKVPSNLMKTAYDFTTGWKVGAGAKQIFMSLVHPSAIITPVSYQFSKLDEPTAVTEGKYFYFEESFEDV
FILNKKADAIQFVVEA
>gi|260686801|ref|YP_003217934.1| hypothetical protein CDR20291_1437 [Clostridium difficile R20291]
MKIMENNIIDEIEKRLESFGYILKDGDKWLIGFVREKIENIIKLDCNIKTMPIELKEIEVDMIVGEFLFT
KKNMGQLDIESINFEAVEKSISEGDTKVDFAIGSGSQTPEQRFDSLIAYLTTYGKNKILTFRCLRW
>gi|260686802|ref|YP_003217935.1| phage protein [Clostridium difficile R20291]
MVSKTRKAIEMLYRDKCTIVEYQPIKDPVTKRTNNKEVIVLENQPCKLSYKNIVSATEGKLAKLEQTIKL
FISPDIEIKAGSKLIINDKEYVRSGESAIYPNHQEIILELFKDKA
>gi|260686803|ref|YP_003217936.1| hypothetical protein CDR20291_1439 [Clostridium difficile R20291]
MYKRGDFMAKFLDITGKKFGRLRVIKFSKEIKSGKRNRKYWLCKCDCGNFKEIRTDSLTSGLVQSCGCLK
KEQDKLNLTDKYQFKKKYKVQNKRLYSIWKGIISRCTDKNNKRYNRYGERNIIVCDEWFCYDNFANWALS
NGYSEKLTIDRINNEGNYESSNCRWVDIKTQCRNRSTNILVKHEEKEITLIELSEKTGISYSCLRSRYSK
GLVGNKLIEKVKIIEESRAKLSIEDVKEIRKKYSDGYTIKQLSEIYPVTYSSISNIVHRRTWKNI
>gi|260686804|ref|YP_003217937.1| phage protein [Clostridium difficile R20291]
MLNNIIDGISVKLDKSFGEKYTIYSEDVEQGINEPCFFIVPLNPSKTPYPSGRELKKNSFDVHYFPRSED
KNFEINEIAEMLLEELEYIEIDGDLVRGTNMNFEIIDNVLHFFVDYNYFTIKNNDTNKMDTVELFGGLKR
GDNFE
>gi|260686805|ref|YP_003217938.1| phage protein [Clostridium difficile R20291]
MALGGGTFVTQNKILPGAYINFISAKRATSSLSDRGIVAMPLELDWGIDEEAFQVTSDDFEKYSVKYFGY
DYTHEKLKGLRDLFKNIRLGYFYKLNKGVKASCTIATAKYSGIRGNDLKVTVTTNIDDNAKFDVVILLDN
KKVDTQIAKVITDLQDNDYITWKKDATLEASAGLVFTGGTNGEAVTGAEYQAFLDKIESYSFNALGCLAT
TTEIKSLFVEFTKRMRDKVGAKFQTVLYKKSDADYEGVVSIENKIKDKDLVESSLIYWATGAIAGCDINK
SNTNKKYDGEFDVDVNYTQIQLEEALKTGKFIFHKVGDEVHVLEDINTFVSFTDDKNDDFSSNQSVRVLD
QIANDIATLFNEKYLGKVPNDKAGRISFWNDVVKHHKELENIRAIEDFKTDDVSVELGNDKKTVIVSDAI
KVINAMSKLYMTVSVN
>gi|260686806|ref|YP_003217939.1| phage protein [Clostridium difficile R20291]
MAQTINAKDTVSAKKAECFITIEGKRYNFMQAIDLEAKMEKNKSEVPILGRTTKGNKTTGSTNTGSATFH
YNTSIFRELLYRYKETGEDIYFDIQVTNEDPTSAVGRQTVVLKDCNMDSGIITKFDADGEYLDEDMDFTF
EDWELVESFALLNGML
>gi|260686807|ref|YP_003217940.1| hypothetical protein CDR20291_1443 [Clostridium difficile R20291]
MEFESGIKLGKLTLIKYLGRNKHSKKVWLCQCECGNKVERVENNLKQSIKNEKPPHCGCSPNWKGQNKRF
KDITGKTFGKLTVLKMSGKDKYSHNLWLCQCECGNRTITSTSALEQGKAQSCGCIRKEILLERSTTHNKS
NDSLYRVYHRMIKRCTNKSNKDYNYYGGRGIEVCNEWLEDFINFYNWSIENGYRKGLTIDRINVNGNYEP
SNCRWVTWEVQRNNKRNSIRVNYKGEMITLKQCAENLNVKYLFLYNQLVTKKIPLEEVIKNIGME
>gi|260686808|ref|YP_003217941.1| phage protein [Clostridium difficile R20291]
MSNLSAFLSQNAIKVDNVKYVASNRFLDKEGKPVEWELKVLSSEEDEALRRKCTKRVKVIGNNGKHTGQY
TSEIDYNSYVAELCVASTVFPDLKDAELQNSYGVMGEAQLLKTMLTAGEYVNYTVKVNEVNGFDTSFEDK
VEEAKN
>gi|260686809|ref|YP_003217942.1| hypothetical protein CDR20291_1445 [Clostridium difficile R20291]
MNNFLLNVIAGVIASLIFCLICKVFLKVKSHSTRGKSKSGWEFDFKIKFHKFK
>gi|260686810|ref|YP_003217943.1| prophage antirepressor-related protein [Clostridium difficile R20291]
MKNLIVKEFNGSQIYTFMWKEKSCWIANQIVGLFDYADVSKTIQDCIKAEDFEIEQEYDVLKGNEFNDFV
TTLNVVANNIISNKARSITIFYEDGLYGFLQYTDKPIGVQFRKWLRREVLPSIRQTGAYITNNANPEKLR
EKASEIEKLQLAYNSTSMLKELLDGAGFDNKSKLLTAKTLYKKAGIDLPIEINEEEHYFDTKQIASKLKI
YSKSNKPAQLAVCEIIKKIDLEENEVKGVWETNGSWTGTVNKYTKSVIDKVRNWIEENNRPTKIAGEKKN
YHVVYKIE
>gi|260686811|ref|YP_003217944.1| hypothetical protein CDR20291_1447 [Clostridium difficile R20291]
MREGKRRRGCLFWFILIILFSGVVGAIAGNSTNNESTEKQKEDLTKYIGEEGSIGDLKLTVNSISKASEI
SVASGYLAYTPDSGKYGIINLTIKNQTKESQSFMLNSFTLIGPDDSKYVPSLLIDVGNKYITMDTVNPNL
DVTGNIAFEIPKDLLVSDCKLKYSGSEQEFILKEK
>gi|260686812|ref|YP_003217945.1| hypothetical protein CDR20291_1448 [Clostridium difficile R20291]
MGLFGKKKADICCICNTEIGVLNIEDGWICNSCFKEYCDALSMTKAPKILRKLDIEKTISSTKKNNELQK
IFNTTNNIENYIEFDEDNKKWLVSKKSINDKKTPIIHSYEDIVKFELLENGETVTKGGIGRALAGGILFG
EAGAIVGGITGKKTTRKVVDTFKIKITINNIDNPIEYIELINKKTKTNSSAYEKAYKDAHKILSTLSAIT
QSIKETDNINTKSVADEILKYKNLLDMEAITQDEFNTKKKELLNL
>gi|260686813|ref|YP_003217946.1| putative phage tail tape measure protein [Clostridium difficile R20291]
MATIQTSIKIFDGMTPAFRNMTTSINTTINSLERLQQRLHNPLNTGGIQASQQSLNNIENILTRIEQKIG
RNTNEQENFNNKIKQGSEAGSLLVSKLKSLAGIYIGIRGIESITKAADTIASTKARLNLMNDGLQTTEQL
NKMIYLSAQSARASYADTAAQVAKLGILAGDAFGSSAEVIKFTELMNKAFVIGGTSANEASAAMYQLTQA
MGAGKLQGDEFRSIMENAPLLATKIADAMGKTKDQLKELSSSGAITADVIRNALFKASDEIEKKFASMPV
TFSQALTMMKNDAYMIFGQTLGKISGALQSVRFSEIVVSIRNVMIAISSNIYDTLNIIKNILNSEFFSNL
VQGFTFCAVVITKSLGSIVNTALNIVNIFAQNWSIIKPIVFGVASVFILFRGVLLATKIATIGNVIANVA
HAASSSLSALMTNIQAAALMRSNGATLSATIATWGLNAALLACPITWVVLGILAFVVVVFVAVAAVNKFA
GTSLTALGVIVGAVFAAVAAIQNVMIWLLNGCIAVNEGITNGWNQCVYLMKQAIAKGVIFIIEKMASLNN
SVNNAGNALGKAFIDGANIAIRGVNKLIDLINKIPGINIGKVGEATFTPVKADNSYIKQQIDSLNRWVGD
APEKVKLERMGYKDIGAAFQKGNALGTKWQNAITDKFKDTFDINKMLEDAKKKLGLDDLWNKQNPLNNLG
GFGGDLGKNVKDTAGNTAKMAKTMDKSQEDLKYLRDIAEQETINRFTGVNIKIDMNNTNNISKDTDVDGI
VNVLTEKLNDAMVVSAEGIV
>gi|260686814|ref|YP_003217947.1| putative phage cell wall hydrolase [Clostridium difficile R20291]
MAYDFYLDGVQLPIAPPKLEVKVTNKNKTVDLINTGEVNILKKEGLSEISFEAEFTHNKLPFCRGQFRDV
QFFLSKLELLKTDCKPFQFIVSRELGNKVLFNTNIKVSLEEYAISEDADNGSDTKVAIKLKQYRDYSTKK
LVLAPPKNETGRPNVKIEPKRVDSVNATNTKTYTVKAGDSLWSICQKQLGNGSLYKKVYELNKSMMDKAN
KGKNLSKYTIYKGQVLKLG
>gi|260686815|ref|YP_003217948.1| putative phage cell wall hydrolase [Clostridium difficile R20291]
MLANDRDVRLVIAHWEDFYEPAVIDGITWEIERRGTPSKLEFTIVMDDILEFCEGNSVRLYYKGIGIFYG
YIFQKKRDKENHIKIVAYDQLRYFKNKDTYVYSNKTASELVKILAKDFNLKYNVIEDTKYKISRVEENKT
LFDMILTALDDTLREKKEMYTLYDDFGRITLKNVASMKLDTVMNNDVIEDFDYNSSIDSDTYTKIKLVRD
NEESGKRDVYIAQDSAHMRSWGILQMFDTVDKNMSEAEIKQKCDILLKLYNKKTKSLSLKNALGDIRVRA
GCLVPVFLNLGDIELQNYMLVEKVKHTFENNSHFMDLTLVDGDEFASYSSSSYSSGNTNNKDEKKNGPAQ
SIMKKNTGKKVPAIFTAYYPGNNAMEGGKTDCNGKPLDVKSRTVAGPMNREGVKKTWYTDDFLNKHPVFE
YGDKVKIILPGTAYDNKVYTVKDNGGRIYVETNGTYHIDILLANASECKKFGRKNGYIIIGGDEEQTYQV
EGNNQSNTNNNSKEDKLISIAKSKLGCNYVYGAEGPNNFDCSGFTQWCYKQIGIKIPRTASAQSKAGKAV
DLKDRSKWKAGDLLCRIGGGSSNHVVMYIGNNQIIHSPQTGDVVKIESVNSYRKGKAYTHVRRFI
>gi|260686816|ref|YP_003217949.1| phage protein [Clostridium difficile R20291]
MSQDLLQIIKKAAMDAVETSNPMRVVFGTIESISPLRVKIEQKLSIGEIFLIQTDTFKRYTDKKMGDKLV
LIRMQGGQQYLILDRM
>gi|260686817|ref|YP_003217950.1| phage protein [Clostridium difficile R20291]
MLPSDNLDYDIEDVSIINFDVRQEPSKTFKLHIEKSKIDGICDDVEALKQTIFLILNTERYEHLIYSRNY
GVELNDLIGEPISYVIPELERRITEALIQDDRIENIDNFEFQNIKGKVQCRFSVHTKYGNIKAEKVVSV
>gi|260686818|ref|YP_003217951.1| putative phage tail protein [Clostridium difficile R20291]
MTFENIIKRMLDSVPDTFDKREGSIIYNALAPVAIELTETYIAMDELLDQTFVDTASYYYLEKRCKERGI
TPLEATHTIAKGVFNIDIPLDSRFNLGEYNYVAIERISEKTYKMKCETTGPVFELGKLIPIEYIDGLETA
ELTEILINGEDEESEDSLRQRYYDSLNSQSFGGNIQNYRDEVNKIQDVGGVKVYPTWDGGGTVKLVIINS
NFKVPSEELVNLVQEEIDPIGHQGEGLGLAPIGHRVTVEGVTSTTINISAEITYKNGYTWENIKSIAEEA
IDDYLNELNMSWEDEENLIVRISQIETRLLSIDGVLDIANTMINDVKSNLTIDSNSIVVRGEVVG
>gi|260686819|ref|YP_003217952.1| phage protein [Clostridium difficile R20291]
MDKEINLINYLPQILQDKEEYIKVFNVENKEIKTLHDKLKDLSNDQFLEDLTISGIKRWEKIMSITPKSN
ESLEDRRFRIFSKYISKLPYSERFLRNWLDNVVGEGNYELTINNATYNIHLESDARNQDWFEEVHSFVSN
IKPCNMTLDYTRVLISKDNYMNFGITTLMGQEITIYPWSPPDIETYGEIDVLTGNGVGYQEITIF
>gi|260686820|ref|YP_003217953.1| putative phage tail fiber protein [Clostridium difficile R20291]
MAIDKSYYTIITDVGKAKIANASVTGNKVGFVKIQLGDGGGSEYTPTESQTELKNVVWEGNIGNTTTDET
APNCIILESLIPSSVGGFMIREIGYLDDENNLIAISKYKECYKPSIEQGAVVDMKVKTVLIVSNINNIEL
KIDPTIIFATLKDIQDLDAKISNVNTKIDTTKTELTSNIETAKTELNTRIDTENEKQNIKIDQLIAGGSN
VASTQTITIDDWIDNQEGGFKATVTHGLLTQRITVSIIDATTKDNVVPDFTIIDDNSIEVRSGVKVELNV
YVINGNAETHFINATVDDNRVSEMTTYSSKKIHEEIGKVAEQLTGINSNIISTVNNDILPI
>gi|260686821|ref|YP_003217954.1| hypotheticalphage protein [Clostridium difficile R20291]
MALSMSYFNLPDKRKYTKNLAFNPFAGGRQNFEWTGGDHGLNGEFKETCLSCTYNGSTLNWGSGNVWVLG
EYGQYTFTYNCESMHVDTQQKFPYTSNRIITIKGRPVISGSDTSLGNKRKGFSVDFTVSDDTPNVNLIVR
AYLDDKLIQNITPVVQNSTLTATVTDSQLNSLSVDGNHKLKIQLNDGYDNFDRIFTFKKIEKGIDISTSL
VTDSQAKFTVTKIYSELTKIECYLDETLKETFTTDLYSEKTINYELIDNAIHTLKIVVTDAENVVEEKVI
SISKNIMPLQPDATLQDISTKLTEIGQGVRNGKTSIINTLALKNIDASLNNTLVELSEKIKGGFDSGDAS
LQDLMNQLTQANNTISQLNTKYKVASGTVTSFADSTKIAYPYLTDNVTKPGSWIKVSNLGFKPNIFFADF
DYYDAEYKNNYKLFLFACNGVATQRGVDFSSVTSFIRKSGDEYFHANGWLYSNSEGDVYFNNTGVQIPAY
NFDSTQKHTYKWYAIKFI
>gi|260686822|ref|YP_003217955.1| hypothetical protein CDR20291_1458 [Clostridium difficile R20291]
MNVPNRIIYDQTGRTIFETGESCGDVLPHYTITELHYIDIEYGSIDYTRNRVIGINIETKEPILEEIPVY
ITDEEKRIQELENQLLIAENEKVGGLL
>gi|260686823|ref|YP_003217956.1| hypothetical protein CDR20291_1459 [Clostridium difficile R20291]
MNINNVVVRILAERILSKGLNPLKNREFQLDDVTNTEYRKAVEDYIIKNSGVVEGAEPTI
>gi|260686824|ref|YP_003217957.1| hypothetical protein CDR20291_1460 [Clostridium difficile R20291]
MTFKELVNKVRNLVLEAKNVTIEDTESKFTSENVEGALKECIDRADEAFQEADSGKTLLSTAIGSPTTSE
QTFQDYANYITGFKSNISNLETQLKSKYSIRYGPIDGYDGNPFSANFGKSASYLIVYVYFRRSVYYYNPS
GSSLGSNTGGSERAWITINSNKTGFSVHSYDTSYESYPFTGYYIACFA
>gi|260686825|ref|YP_003217958.1| holin [Clostridium difficile R20291]
MDNLISFIPEQLLILVAALSIIGKGCKKYKQLDNKYIPVVLLILGIGFSIWMLGLNPVAVLQGVICWGVA
IGINQTYKQLKDGEK
>gi|260686826|ref|YP_003217959.1| hypothetical protein; hypothetical protein [Clostridium difficile R20291]
MVEVKEEKTFDEQIDILKSRGLIINDKEDAKFVLSNVNYYRFTAYLLSFKNDDGSYKEGTTFEEVYDIYR
FNKEFRILLTDLLGSIEIAFRTYIAYTLAIKHGACGYLERESFKDEKFYINFLTALEREKSNNSDKLFII
HHKEKYEGKLPIWVATEIMTFGMLSKLYSNMLPEDTRYIKNNLCRVNTLLVKSWLQSLTQVRNQCAHYGR
IYNNNFRIITIKNEYKKYNLDNKKIFSYILAMKHLTMDKLIWNSFFIKLQKLINDYNNSIDLKLIGFPNN
WIEILAK
>gi|260686827|ref|YP_003217960.1| n-acetylmuramoyl-l-alanine amidase (cell wall hydrolase) region relative to most database matches fragment [Clostridium difficile R20291]
MKICITVGHSILKSGACTSADGVVNEYQYNKSLAPVLADTFRKEGHKADVIICPEKQFKTKAEEKTYKIP
RVNSGGYDLLIELHLNASDGQGKGSEVLYYSNKGLEYATRICNKLGTVFRNRRAKLDKGLYILNSSNPTA
VLIESFFCDNKEDYEKAKKLGHEGIAKLIVEGVLNKNINNEGVKQMYKHTIVYDGEVDKISATVVGWGYN
DGKILICDIKDYVPGQTQNLYVIGGAACEKIGSMTKEKFTMIKGNDRFDTLYKALDFINR
>gi|260686828|ref|YP_003217961.1| cell surface protein (putative penicillin-binding protein) precursor [Clostridium difficile R20291]
MIFKKYIKSLLIVVSVTLIMNKSILFVNALDLESNNNIKSYKRKNVKEIDISNKFVDESFRRDIVEKVLD
NRDDPLTNEVASKDNYKIYESDLNKIESCLELDLHKNPDVSNPNKIDNLDGIENFRNLEKLDCSSNNLES
VDLSKNIKLKYLDISGNKILNIDLKNNNLINELHCDANKLSNLDLKNNKNLVSLFFTSNELTEIDLSNNV
NLENLQFLNNNLKSIDLSHNKKLKSLNCTNNKLKSLDLSNNVFLKNLSCSGNNLSKLNIKGLTSLEYLGC
AKNKLQDLDVSTNIKLDSLLCGKNSLTKIDISKNKELNSLECSGQYIEKSIIKNGENIVVDIGIENSKLK
ELYPQNYNISTGFLTWENLSDFPNSISYSLEYEYGPVNDTETMDVNISIDKLVKCRIRYIDYDGSIINEK
EISDNSSINEIQINPQRENYEFSGWRNNKDEKIYTSEQVSKLVFDDSTDFIATYKRKSTGSSGSSGGTSS
KEDFNIAPSKEKITGADRNETSVKISQKGWNKADNIVLINDSSISDALSATPFAKSKDAPILLTKNNNLN
KLTEKEINRLEAKNVYIVGGLKSVDEKVVSDLKKKGLNVIRISGNDRYETSIKLAKELDKNSNLSKVVVV
NGEKGLADAVSMGAISAKEEMPILLTNQNDDMKDIKDLIANKNISKSYVIGGESLFNNKEVNNTLPSVTK
IAGSDRTETNSKVISHFYSKDTLNDLYVAKNGMNKQDDLVDALSVGVLAGKTESPVVLVGNGLDDSQKEL
IKNKKFKNITQIGGNGNEKAFNEVENLVK
>gi|260686829|ref|YP_003217962.1| putative manganese-containing catalase [Clostridium difficile R20291]
MFKHDKALLKEVKVERPNPQYAVLMQEQLGGANGELKAAMQYLSQSFRIKDPQIKDLFLDIAAEELSHME
MVAQTINLLNGHDVDYNAVNTGEIETHVLTGLSPVLINSSGAPWTANYVTVTGDLVADLLSNIASEQRAK
VVYEYLYRQIDDKYVKETIDFLLNREEAHNALFRDALNKVKDTGSNRDFGVTEDSRLYFDLSTPGPNHNT
KIDINPPSFEKPLKK
>gi|260686830|ref|YP_003217963.1| hypothetical protein CDR20291_1466 [Clostridium difficile R20291]
MDSNRKPNNLINEKSPYLLQHAYNPINWYSWNDEAFKKAKEEDKPIFLSVGYSTCHWCHVMEKESFEDEE
VAEIMNRNFVAIKVDKEERPDVDSVYMTVCQAMTGSGGWPMTIIMTPDKKPFFAGTYFPKYSRYNRPGVI
DLLKNVSEKWNTSRDILIKSGDEIIEALKDDFGVKNTEGDLSKEMLSSSVRVFKAIYDEKYGGFGNAPKF
PSPQNLMFLMKYYSIEKDKDVLKMVEKTLDGMYRGGLFDHIGFGFSRYSTDKKWLAPHFEKMLYDNAMLT
IAFLDAYKITKKELYKEIAIKTIDYVVREMKDKEGGFYSAQDADSEGEEGKFYTFNPLEIIEVLGEEDGT
FFNNYFDITSSGNFEGKSIPNLIKNKEYERHNEKIADLSKKVFEYRKERTSLHKDDKILTSWNALMIVAL
TKAYSTLKNDIYLEYSNKCLNFINNNLVNESGRLLARYRDGSSDYLAYLDDYAFLIWAYIELYESTFNMK
YLEKALNLNESCINLFWDYEKSGFYIYGKDSENLIARPKDLYDGAIPSGNSVQLYNLIRLAKITGDNRLE
EMSYKQLKLYVDNVKSSPTGYSFYMLSLMFELYSTKEIICIFKEDSDLIAFKELISENFIPNATFLAKKY
NEENTIIGFLNNYRLKDDKTSYYVCQSNSCSQPINDLQKLKDMILGVE
>gi|260686831|ref|YP_003217964.1| MarR-family transcriptional regulator [Clostridium difficile R20291]
MTLELIHDILFSTKQLLKIKEIYFMDYSNELKELFLMNQTYATLFTLTNKIQIEGDKYFGILTSRQYMTI
LSILHLPEEETTLNNIARKMGTSKQNINRLVANLEKNGYVDVIPSPHDKRAINVKVTDLGKKVMVTCSRT
GINFMADVFHEFTKDELETLWSLLKKMYRFNGEEQDGFEEDANFMEYEEIDKIKSEALEEFAKRRNRVNK
ND
>gi|260686832|ref|YP_003217965.1| transposase-like protein b [Clostridium difficile R20291]
MYCGQHIKLPKLGMVKIRDKQVPQGRILNATISKEPSGRYYVSLCCTDVDIEAFENTNNHIGLDLGIKEF
CISSCGEFIENPKYLKKSLNKLAKLQRELSRKTIGSLNRNKARLKVARLQEHIANQRNDFLQKLSTKLIK
ENDIICIEDLQVKNMIRNRKLSRLISDVSWSEFIRQLEYKANWHGRQIVKVGKFFASSQICNKCGYKNEE
VKDLNIREWICPSCNEIHDRDINASINILKEGLRLITIQNK
>gi|260686833|ref|YP_003217966.1| putative transcriptional regulator [Clostridium difficile R20291]
MQIKIGKVIQRLRKERNLTQEQLAKFIGVSTPAVSKWESGNSYPDIELLPLLADFFNVSIDKLLNYKIDL
SEEKVMKIYKELESGFARIEIDLSTEEPKEEFRQDLESVKKLSNMYIEKYPKSYLLKLRICSLYQMYSYK
FGKSELNDRVKETTNILEDIVRNTDDIQIKETALIILSNAYCMLEDYEKAELYLNMIHKSIGDTSVNLAM
IYLKQNRLEEAEILLQNKLFSNIFNISMDCKGIINVYKNQYKELKKKLENRNFNKNAIEREMEYIKNKLL
WYANLSLEIKKMLSEDKGAFFSMYVDYMELSLIFLFFNMKEEAKKALYSLKEILEKYPIHESLDVSQMRF
FDKVESKNLYTFNIYTNLLIVLNDDSYNELREEPIFKDVIEKILDMEKMLKNKE
>gi|260686834|ref|YP_003217967.1| hypothetical protein CDR20291_1471 [Clostridium difficile R20291]
MIRRSKVKFERLRTSENKLYYKAMELYKISFPFHEQRKSYLQTEILKNKEYQFNLIYDKNQFVGIILCWE
TDNFIYVEHFCIFPEMRNNRYGQRALELLNKKGKTIILEIDLPIDEISIYRKAFYERVKYKTNNYEHIHP
PYHEKFNGHNLIVMSYPEKLSKMEYDKFNHYLRNNVMSF
>gi|260686835|ref|YP_003217968.1| hypothetical protein CDR20291_1472 [Clostridium difficile R20291]
MEKREKRIIISSLLSVSILMGLVSIYSILNKEDIILTVKGQEQKVSSFKKTVEELLDEQGVKYNSEDKIN
PSLDTELKDDMKIKVVKVTKSKKEEIEKIPFDTKHVNDSNLLKGKSKVYQEGQEGEKKLVYNLTYHDGKL
VKKVLSKEVISKEPTTKIIKYGTKEKVLIASRGANIRGGKHMKVVATAYAGDTITSTGTTPRWGVIAVDP
RVIPYGTKVYIPKLGMTFVAEDCGGAIKGNRIDIFMNSEGKASNWGRKSIDIYLH
>gi|260686836|ref|YP_003217969.1| putative arylesterase [Clostridium difficile R20291]
MKIVCLGDSLTYGFGVSRSNSWTNIVNEETRLEIVNKGINGDTTSGMLARFNEDVVKNSPDIVFIMGGTN
DFIAGAGNEIINSNIMAMVHQSYSKNIIPIIGIPLKPDIPNVREDWSCFTDFNIVSQNLESYSYWIKKFC
MTFNTNFADFYSEYNKNMELEGYKKLYFDGLHPTKEGHRIMADIFINSINKYIEEL
>gi|260686837|ref|YP_003217970.1| putative phosphoglucomutase [Clostridium difficile R20291]
MLVYASVAINTYSREGFIMDYTKTYEEWIKGSYFDEDTKLELENIKNNEKEIEDRFYKDLEFGTAGLRGI
IEAGTNRINKYTVRRATFGLANYILENTTKEETSRGVVIAHDNRHKSRQFCIESANTLAACGIKAYIFDS
LRTTPELSFAVRSLNAIAGIVITASHNPPEYNGYKVYWEDGAQVMPEIANAITEKVNSIHDYSTIPTLTE
ANKNLVVLLDESQDTKFIEAVKSQIIRKDLVKNVGKSFKIVYTPLCGTGNVPIRRALKEVGFENIIVVPE
EENPDPNFAGLDYPNPEEKKALNRGILLAKEKGADLVIATDPDCDRVGVAVKTTTGEYALLTGNQIGGML
THYIIEGLKENNKLKENPTIIKTIVTSEFGADIAKANNVDVLNVLTGFKFIGEKIKLFEQNKNRSYVFGY
EESYGYLVGTHARDKDGVVSSLLISEMAAFYYSKGISLYDGLIELYKKYGFFKEQTISLTLKGIEGVEKI
KEIISYFRENQIDYINSIKVVDKKDYKNGIDNLPKSNVLKYFLEDESWVAIRPSGTEPKLKFYIAVKGAS
DIEADKKIQGLKKYIDDMVEKLK
>gi|260686838|ref|YP_003217971.1| putative membrane-associated ribonuclease [Clostridium difficile R20291]
MFGIDKKLIEYIIAKSNYSELSSKSAEVSFFLMLSIFPFLIFTISSIAYIPILHLNKYIALFRNMMPEGA
FAVLSSIIVSAIDNRNLKFLAVSFVLTMWTFSRAVKALIKGMNRAYKVKETRSFFKILSISFLFTIMLLV
LIFLSMIFLVYGEKIGYFIFNLVGLDEIFIKIWDILRYTVGIITIIVIFTLLYKYTPNKKLTIKESAPGA
IFATFAWFLVSFLYSYYTNYYANYEVIYGSIAEIIVLMTWMYFSSWSIVIGYEVNSRLYFRKIRHEMLK
>gi|260686839|ref|YP_003217972.1| putative two-component histidine kinase [Clostridium difficile R20291]
MDIHNKYVNFIKNIPVPFLYCRIVKRQEDIEYRVEYISKGMGKVLQLEEGICDKNILDVLPVFKSKKYFK
ELFSNEVDCIKRYIPTLKNWINIKKQIIGDSYIILYFGKIVFDYRQIIDSFDKKEKVAYIKDEEGIYIDC
SENLIPILNNNIKTTKDIFGKNDIEVWGENTGKLFRDDYRGGVSSKKRFLQNLFEYEETFFMVEKYFLYD
EDELLGTIGIIDNIIYSGYSNRNYNSKDLMKMIEHSIPENMFYKDVYGNYIGFNSGFLNLACMNKEELLG
KNSYKISEEEALINKIFESDKGVVENKKVVTFELNVSINDENKCIEITKRPFFDSYGSVIGIIGTARDIS
RRKRLEEEMDKTRMEFFANLSHELRTPINLISSSLQVIEKKEADLIESNDTLKRNLGIIKQNGNRILRLV
NNVIDFTKMQSGYLDFKPEESDIIAFIEEICMSVADFASQNNIQLTFDTEIEEFSMLFDSEKLERIILNL
LSNGIKYNKKDGKINIFLYVKDNVFNMKISDSGIGIPKEKIDKIFNRFEQIDNELSYRVKGSGIGLSLVK
SLVELHEGSISLKSQLGIGSEFIVSLPVRSENNIEKYNHKREISNELSKKLEIEFSDL
>gi|260686840|ref|YP_003217973.1| homoserine dehydrogenase [Clostridium difficile R20291]
MENKVKIGVLGYGVVGSGLIDIIDNNKEKRSIEIVGILVNNLEKHKDKKYSNIITNNIDDIFNKDIDILV
EVMGGLEPSLSYIKKALNNKIHVVTANKDLLAECGDELAKLASENKVSIKFEASVAGGIPVLKPIIESLE
GNNIDSINAILNGTTNFILSKMYDENLSYDMALRQAQELGFAEANPESDVLGYDAARKLSILSTLAYDNR
VYWKDVYLEGITDIDEKDIEYAKKLNCKIKLIGQSKYENDKVSAFVRPVLVEKDNILARIDNEFNAVIVN
GDSVGEVSFVGKGAGSLATGSAVYSDVIDIIDNRVSSIDSFTKDKIQVNKIVREKCGALLRFKKCNKDEI
LNIVENCLVKFDILNDDDELAIMVYADSEYEINNSLCLIKDKGYCEKMNKMLKIS
>gi|260686841|ref|YP_003217974.1| hypothetical protein CDR20291_1478 [Clostridium difficile R20291]
MENKKYANGGYSEDWYERGESTAKWFQNDREEYERAAYDEDRERRGSNCGCSDSGGNRPRNCERFRREAE
IREREAREAFCESSERKKEALAYECEARKLWEEAEKYWDEYSKYNYKGIEYLAEAARLFDEGMECEARRN
GNNGGNNNNCCHKCHKCNCNCCRK
>gi|260686842|ref|YP_003217975.1| histidinol dehydrogenase [Clostridium difficile R20291]
MKSIKTSSMKEKVDEKILREQVSSIIEDIRNNKDVALKKYNEKFDRNTRDEFRITKEEIKEAYKHVDDEF
INNLKIAAKNIREFAKAQKLSFENPFEKEIYPGVILGQTNIPIESCLAYVPGGQYPLFSTALMLIIPAKV
AGVKRIVACSPTMKNTEKINPKTLVAMDIAGADEIYATGGVQAIAAFTYGTEKINPVDIIVGPGNKFVTE
AKRQCYGQVGIDFVAGPSEVLIIADETSNPVYIAADLLAQCEHDLNARGILLTNSLEVAQKVEKNIESML
KDLPTKDIAYSSWENNGEIILVDDMEEAIKISNFYAPEHLEVAVNEYNDICDRLTNYGSLFIGNLSAEVF
GDYVSGTNHTLPTLKASRYTGGVWVGTFIKTCTKQIFNEKAIQSLAPVAEKLAKEEGLYAHAKAAEVRFK
K
>gi|260686843|ref|YP_003217976.1| hypothetical protein CDR20291_1480 [Clostridium difficile R20291]
MSYFQYQGNSCFYKEYGQGKPIIFLHGNTGSSNMFKALVPLYVENFRCILIDFLGNGQSDRVSQFSPDIW
HDEALQTIALIEHLNCGKVGLIGTSGGAWAAVNTGLERPDLVEAIIADSFDGRTLNDNFIDNLITGREKS
KQDIQARKFYEWCHGKDWENVVNLDTKALLQCANKKRPLFHKELCKLEMPILFTGSKEDEMCRHNLEEEY
KQMATFISKASIHIFSQGGHPAILTNADEFAQLAKVFFKY
>gi|260686844|ref|YP_003217977.1| hypothetical protein CDR20291_1481 [Clostridium difficile R20291]
MSYQNSIDLLPKELIEQVQEYIDGKVIYIPKKQEHKKHWGENTNTKQVLASRNSQICINFQNGMSIKQLS
EKYFLTEKSIQRILKQQNL
>gi|260686845|ref|YP_003217978.1| putative sugar metabolism repressor [Clostridium difficile R20291]
MKNIVGKPQTIKKVNEDLIKNIIKNEGPITKPEISSITELSLATVNKIVEQLALKNEVKVSGLSESTGGR
RAQLFEINANLEHIIALYYYRNCCIGVVANLLGEIIYQEEFNIRMDTYENVNQDTFFVIDTLIKKEKGNN
IRAIGIGVPGVVKKGVVKNIPTIKSWEGINLENLIKSKYNTKVFIENDTNITTIGIYQKQYKDKYKNMAL
MYLEDGIGSGIVINGELYLGSTNFAGELSYLNIEFGKYNSNNLNLEDYIMSLRKRYLESKDNKFKKEILS
IISNFIRTLVCVLNPQAMIIQCSILTKSDMEFIEKDVSNNVGEENFPKLIKVESLRERSINGVISMCLKE
TDYQYSLSNKKGGY
>gi|260686846|ref|YP_003217979.1| putative N-acetylglucosamine kinase [Clostridium difficile R20291]
MKYLVSIDGGGTKTKFCVSDLDGNILKEHTTGSTNYKSVGIKKTYENINNGLKKILKDLYIDYDDIEYTV
FGISGCDSPNDYKIIMDEILKIGINKEKIYLANDAVLAFYAQADSPGLVIVAGTGSIILGIKEDGEIYRV
GGWGYNFSDLGSGYDIGRKLLKKVLLYCDECHEYSDLFSCVLDFFGANSFEQLAYMITDINNNVEIANLA
SLVIDCAEQGDKLAIEILRESSTELSKLAQVILRKISNPMKIDKSEINIVLSGGTLNKTVYAQMLMNNLK
TENTDKNLKFISQENQPVYGGIRLAMALANRRVKHG
>gi|260686847|ref|YP_003217980.1| hypothetical protein CDR20291_1484 [Clostridium difficile R20291]
MDRKKVIVQIFTGGFKAKEIKFNDIKCKLLELLDCIDIEKVIMGWSVDEELYVETKKLLNKYNVELYLWL
PCFSEIGLLEKSNLLIDYMGKEVKGYALQEDENFEFYCPNNKENIKNIKKIYSTYFSDIKFDGIFLDKIR
YGSFSNKLNGVFNCFCKDCLNIYEKNNIDKKSLMREMNNVSKGVIDNEDTPSGITEYINGKYKFKNKIWE
DFFETKNQNIYKSLLEISSYFKSKGLKIGIDTFSPFISYFTGQDLKKLQEVADFIKPMMYRTTKAPAGLP
FEFERFIDESIHKNKEIGKRNFLDILGIKEYEGDVYPIEFVLEEIDFMTRNLNKDIYVGVEINKKEIIAP
VTPKYISENISNINKTTVKGYVLSWDLLSAPKENIDEIIKWFRN
>gi|260686848|ref|YP_003217981.1| putative ribose ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MQQIYKSFGKVDVLKGINFELEKGEVRALLGANGAGKSTLIKILGGVHSQTKGKVILTGNEIMFKNSHHS
KENGISIIYQELSLIPTLTVLENIFLGREILKGSVFLNKKDMLEEYMKICEDFDFNIDPHTVVSNLSVAN
QQMVEIMKAVSCNSEIIIMDEPTTSLTNNEKDGLFKIISRLKSKGKTIVYISHILEEVFKVCDSASIMKN
GIMIGTYDVEDLTKLKITQLMTGNDNHKLIEKKDYTFAKYEEPPVLEVKNISWSNKIKNVSFKVYRGEVV
GLAGLVGSRRTEIINLIFGIDNKDSGDIFINGKKVDITSPKVAIKNKIGLIPEDRKNLGLILEQAIYTNS
SSVQIDKFKKFLFIDRNKEIEFSKKGVKELGIKVSDVKQEVKELSGGNQQKVVVSKWLEKDLDLIIYDEP
TKGIDIAAKEDIFNTIKEFSSEGIGVIFISSDLEEVIRVSDRILVTREGSIVDDLKNENIQVQDIMNSIF
NV
>gi|260686849|ref|YP_003217982.1| putative ribose ABC transporter, permease protein [Clostridium difficile R20291]
MKKAFEKLNLRDYGVLLGFLALCIAISIATPSFLGKQNILNLLRQSSIIGIISAGMTFVIISGNFDISVG
AVAALAGAITMKFATGGTNLFASMLLGVAICAVIGLINGIVVAKINVPSLIATMAMVTIVRGLLLMLTGG
YPITENIPILDYIGNGYLFNIPIPVVIFFIVVLVSFIVLNKTKFGRYVYSVGGNQEASKLNGINVDSHKV
KVFIINAVLAGIAGIVLTGRLGTATAIAGEGYDMDAIASVVIGGTSVAGGSGSVLKTVIGVLLMSVINNS
FNLLGIDVYFQYIFKGLIILAAVGFDSYSKKKLASR
>gi|260686850|ref|YP_003217983.1| putative ribose ABC transporter, substrate-binding lipoprotein [Clostridium difficile R20291]
MKKLMKHLALLLSLVMIFGLVGCSNGGDKEKNGEKKIAVLLPGSTGYFVATKQGIDAKSKELGVSVEYAD
AQWDASKQLSQAEDFMAKGVDMIALCGVDSAVSERIVKAANDSDVPIVAFTNSIGSNPTGEFKGLVTYIG
QNEEETGALTGKIAKNLLGETGGKAVLIEGVPGTTPQVLRKKGLEKELKDSNIEIVYNQTSNWEKEQALK
VTEDLIQKKTDFNVIICQDDNSATGAGQALKDAGLKDKVKVIGLGGSKDGLKAITDGLIDGTTYMSAVEE
GGLVIEKASKFLKGEKIEPVTQIKQVEVNKDNISEFKGEW
>gi|260686851|ref|YP_003217984.1| hypothetical protein CDR20291_1488 [Clostridium difficile R20291]
MARRLFLERIGLIFLGSAILAFGVYNFYYLNNITEGGVLGILLLLKNLFNIQPAIANVVIDGLLLLVGYK
FFGKKFLIYSIVASITFSVLYDLFEAIGPLVPQSQNMLLSTILAGVTVGTGVGIVVKAGCASGGDDALAL
VISKTTSLNIGQVYLATDVIVLLLSLFYLSAFDIFYSLIAVTISGKVIDFIYYHGKSLDMDISNDIVPEC
>gi|260686852|ref|YP_003217985.1| potassium-transporting ATPase A chain [Clostridium difficile R20291]
MVQIVIVLAIFMILVIPMGKYLYHIATNQKTFGDRLFDKVDNFIYKVCSIDKKKEMNWKQYALALLFTNA
VMVFIGYIILRTQSMHIFNPSGIKSMEQGLSFNTIISFMTNTNLQHYSGESGLSYFSQMTVIIYMMFTSA
ATGYAAAMAFVRGLVGKKKTLGNFYVDLIRITTRVLLPGALIIGLILVTQGVPQTFAGTETVTTIEGKLQ
DIARGPVAALESIKHLGTNGGGFFGSNSSHPFENPTIISNIVEILSMMILPGACVVAFGHMIKNKKQGWV
VFGAMSIIFLIGLVVCFKAESAGNPILSQLGLNQSMGSMEGKEVRFGIAQSSLFTTVTTSFTTGTVNNMH
DTLTPLGGLVPLLNMMLNVVFGGKGVGLMNMLMYAIIAVFLCGLMVGRTPEFLTKKIEGKEMKLIALLII
LHPLLILMFSGLSVAIPAGLEGISNPGFHGLSQVLYEFASSAANNGSGFEGLGDNTMFWNITTGIVMFFG
RYVSIIVLLAISSLLASKKAVNESIGTLRTDNFTFTIVLVLVVLIVGALTFFPALALGPISEHLVLWH
>gi|260686853|ref|YP_003217986.1| potassium-transporting ATPase B chain [Clostridium difficile R20291]
METKKTKFITKDIFKTSIIEAFKKLNPKYMMKNPVMFVVEIGFIVTLILTIVPSLFGDEGNNLRAYNGIV
TIILFITVLFANFAEAVAEGRGKAQADTLKKTRKDTVARVIDTLGNEKMISASELKLGDIVLVNVGEVIP
NDGEVIEGIASVDESAITGESAPVMRESGGDFASVTGGTTVVSDWLKIRITTKPGESFLDKMIALVEGAS
RQKTPNEIALNTLLVGLTLIFMVVLISLYPMANYAGVKIPISTMIALLVCLIPTTIGGLLSAIGIAGMDR
VTRFNVIAMSGKAVEACGDVDTMILDKTGTITYGNRLASEFIAVGNADSKDLINYSVMCSLKDDTPEGKS
IVDLGMKLGSTGKTKEAEEAEFVEFSAQTRMSGINLADGRAIRKGAYDSIIKRVKESGGTVPEDLEENVN
RVAKLGGTPLVVCVDNEIYGIIYLKDTVKSGLVERFARLREIGIKTIMCTGDNPLTAATIAREAGVDGFI
AECKPEDKIDAIKKEQLEGKIVAMTGDGTNDAPALAQADVGLAMNSGTTSAKEAANMVDLDSDPTKILEV
VEIGKQLLITRGALTTFSIANDVAKYFAIIPAIFTLAIPQMEILNVMKLSTSFSAILSALIFNAIIIPCL
IPLAMKGVKYRPMKSQAMLMRNMLIFGLGGVIVPFLGIKLIDLLITPLVMILNLG
>gi|260686854|ref|YP_003217987.1| potassium-transporting ATPase C chain [Clostridium difficile R20291]
MEDIKMKTLKPALLVSIVLLVVCGLVYPLVLTGVSQVAFKDKANGSMIEVNGVKVGSELIGQSFTDARFF
KGRVSSVNYNTYTKEDLVPDKDGNASYGGVSSGSFNYGATNPELHDRVQKDIEKFLKDNPTVKREDIPTD
LLTASGSGLDPNISPASAKIQIPAIAKASGISESKLQKIVDDNTSKKLFGVLGEDRVNVLKVNIEVAKIL
GLI
>gi|260686855|ref|YP_003217988.1| putative O-acetylserine sulfhydrylase [Clostridium difficile R20291]
MLYNNALELIGNTPVVRLNNLGCTNGCSNIYVKLEKVNPAGSIKDRAVYEMLEGLEQRGELKKGDVLVEA
TSGNTGIALSMIGKLKGYEVVIVMPETMSVERRDLMKAYGANLVLTDGKAGMAGSIEKANELLKENPNYK
SLKQFENKDNPNAHYKTTAVEIMNDVKDLDIFVCGVGTGGTLIGTARYLKEQNPNIRVIALEPKKSPAIS
ENKTGPHKIQGIGANFVPENYDSSVVDEVILVDDEDAFDTVKLLAAKEGILVGISSGANIFGAIEMAKKY
PDKKIVTVAPDGVDKYMSMGIF
>gi|260686856|ref|YP_003217989.1| serine acetyltransferase [Clostridium difficile R20291]
MNTLFKKINKDIEYIMKNDPAARSKIEVFLLYPSVHAMIMHRMAHALYKKKKLFTARLISQISRFMTGIE
IHPGAKMGEGILIDHGMGVVIGETAEVGNRVTIYQGATLGATGKDTGKRHPTVGDDVLIGAGTKILGPLN
IGSNSKIGANSVVVKDVPNGATVVGIPAKIVKIRNLEPVKKNKKEVSYEYDELDNVYYI
>gi|260686857|ref|YP_003217990.1| methionine aminopeptidase [Clostridium difficile R20291]
MKLNRNDSCWCGSTKKYKKCHMDMDNKIDSFAKLGHIVPTHDIIKNESQIEEIKKSAVINTKILDYISDK
IEIGMSTEDMNKLVHDFTLQNGAIPAPLDYNGFPKSVCTSVNNEVCHGIPSKDIILKDGDIINVDVSTIF
NGYYSDASRMFMIGNVNENAKKLVQVTKECVQKGLEVAKPWGFLGDIGDAINSYAKKNGYSVVREIGGHG
VGLSFHEDPFVSYVSKKGTEMLLVPGMIFTIEPMVNEGTHEIFVDEENNWTIYTKDGKLSAQWECMVLVT
ETGVEILTE
>gi|260686858|ref|YP_003217991.1| hypothetical protein CDR20291_1495 [Clostridium difficile R20291]
MIMENNLNIAKKNNTELLQNDSLKVNLQIGVDFTLLSKSLKAFYKKEKDFYCIALAPCNVSSEKANRKIS
IYDMIKEINILIESITDKNELLSEELFTNNLSEFYDESLDEIYIDLKQAYLYIKKNTDSLNIEDSIEYVF
DVDISNDIKAKENPLINFNSLSLVVWSGETKHILQQMNILDLEDIHSYYMENNTNITIYENNTLQYKFDE
ESEDIKDSSIDIIEQMLILPDDLNYDKDEVENMKSRLAKINIKYLQTLKEKDIKIKLINSNLTDEPEFSD
LKYQLPPCWVRSGKTWKDVPGIYRNNSIVAKIGYSNPSYANVHSSKNLELHETAHAIDKNVLNKKSNSEE
FMEVFAQERYKLYDPKQVAHAYISKFIEEFFAESFVHYYLDEDSKNTLKENCPLTYDFLEKLELNY
>gi|260686859|ref|YP_003217992.1| putative endonuclease [Clostridium difficile R20291]
MYFTYIIRCKDDSLYTGYTSNIVRRMNEHKLGINSKYTRAKGFEKLEVYFVTNTKSNAMKLEYYIKKLTR
NKKLSIIKNPSILINLIDNKEDYIIGKEIEQLT
>gi|260686860|ref|YP_003217993.1| putative phosphomethylpyrimidine kinase [Clostridium difficile R20291]
MSNYKIPTLTIAGSDSSGGAGIQADLKTFSAIGTYGMSVITAITAQNTKGVFAVEDLNKKIIKKQIEAVF
EDIPPRAVKIGMVSSPEIILEIVENLKKYNPKYLVVDPVMISKSGYYLLKPEAKENLIKYLIPLAYIITP
NIPEAEEITGIKIHNVDDMKRVGEEILQLGPKFVLMKGGHLDGEAVDILVGKNIFKVYKSERIDKKNTHG
TGCTLSSAITSYLALGYEITEAVNLSKIYITEAIKRSFDIGHGVGPVHHFYKFE
>gi|260686861|ref|YP_003217994.1| hydroxyethylthiazole kinase [Clostridium difficile R20291]
MYNLIKDVKKLNPLVIHYTNNVTINDCANVTLAVGASPLMSFSYEEVEEMVSVANSVVINIGTMNSNMLD
LFLLAGKAANKYNKPVVLDPVGVFASKARAELTSRLLNEVKFSVVKGNVSEIKFIGGFNVRGKGVDSFDE
EEDSTEIIRKIAEKLECVVVATGKIDIITNGKGIYKINNGTDKLKGITGTGCMTASLIASFMAVTENILE
AATMGVLTMSLSGELANLNNPPIGTFKENLMNAIYQMDIDTLSKNSNIEFLN
>gi|260686862|ref|YP_003217995.1| thiamine-phosphate pyrophosphorylase [Clostridium difficile R20291]
MIDKESLKKCLKLYLVTDSEMLKGRDFYKCLEDAISSGITTVQLREKNASGREFLRKAMKLREITERYGV
KFIINDRVDIALICDADGVHVGQSDIDVREVRKLIGNNKILGVSARTLEEATCAKNDGADYLGVGSIFTT
STKLDAKSASFETVKEIKEKVDMPFVLIGGINLDNIDKLKCLESDGYAIISAILKAEDISKEVEKWTLKI
>gi|260686863|ref|YP_003217996.1| PTS system, IIb component [Clostridium difficile R20291]
MIKILLVCVGGMSSTLLVNKMEKDAKKRNIDCKIWAVGEGDIKSELDNFDILLLGPQLRFMLDDVKSIVG
DRVPVSIIDMVNYGTCNGHAVLNSVLEILK
>gi|260686864|ref|YP_003217997.1| ABC transporter, permease protein [Clostridium difficile R20291]
MGMLNILWRSMKWRFKNPISFVVTILQPFLWLVLYSSIANQTMNNININNYTAFILPGIIVLVVFSSCSS
GGIINFIMKNSGSFYRVLIAPISRYSIVLGQLLEAILVSFIEVTILCIVSIFFSVRIESGIGGILLMIVL
IFMTAFFLSSLAYSISLLLPNEIVYETIMTAIVLPIFFLSSALFPIESLSGGLKVAVMLNPFTHVINALR
SLIFGETILIGDILPVILLFLILCCSSFSLAMWRLKKEMVS
>gi|260686865|ref|YP_003217998.1| ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MLAIEIDNLVKEYKNGVKALNGLSFNVNAGEIFSLLGPNGAGKSSLINILTTFYKPTSGNVKMFGKDLVD
NPSWIRTQIACVAQQISIDEHLSLMENMVFQSKMYKVEPQIAKQRIDSLIDKFDLSSYLKYPTSSYSGGV
KRRLDIAMNMVSSPKILFLDEPTVGMDVDSRKSMWDMLLKIRDEYGTTIFLTTHYLEEAEQLSDNICIMK
NGKDLAQGTPSSLRSYIRQNILRITFHNTEDIKKYKDSIKSTGLVKFMSVRENSIFISVNDSRTAFTLIN
KWLLEHDIEFDAIEIVEPSLEDVFLALTSSKKSLKEEWEC
>gi|260686866|ref|YP_003217999.1| hypothetical protein CDR20291_1503 [Clostridium difficile R20291]
MRYNGPMTEATKYFPNVFKAIKGKSNGAPFFCYYDVDQKTGVAEMELCVPTAETPNRMGITTKEFPKTKA
LFFTHTGSYSNLPKTYEMIFKYIHENNIKIQTPWREVFIKGPGMLIKGNPDNYITEIIFPLKEEE
>gi|260686867|ref|YP_003218000.1| GntR-family transcriptional regulator [Clostridium difficile R20291]
MNFELDNTTPIYLQIVKYIKRQIVTGELKPGETIPSRREMALNLKVNLNTVQRAYKEMGDMNIINTFKNY
QSSVTVDENILKNLKLELINESLSVFIEDMKAINVSKEEVLKIIEDKY
>gi|260686868|ref|YP_003218001.1| ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MWRIVNMIEIKNVSKTYKRMQGLKIRKIEALKNVSFNIEKGKITALLGINGVGKSTMLKAIAGLINIDSG
EIRIDGEKINEKVYNKLAFVPDVQSHFSNTTIKETFEFMEIFYSKWNKEKSKEMMDIFKLDEDEIIDNLS
KGNIARVKLILGFCQDPEYILLDEPFTGIDLFKREEFIGVIAQYMEENQAIIITTHEIVEIESLVDEVVI
LDEGQIITSFNAEELREREGKSILDKMREVYKNE
>gi|260686869|ref|YP_003218002.1| putative ABC transporter, permease protein [Clostridium difficile R20291]
MNKLLYLINVDLRRSNKFYIAYISFFSLITLSLNLFEINKFKNSKFIMNLAIEDFGGIFYGLGILSNLGF
IQNILFFGMLGLFIYYIFMWKREFFSNNQSIYTLMMLPQNKFKICISKSIVLITMIYGFLISQTATLFIC
KYIFNFIFRNIPIINMNFAKDLYYLNLKSIPIDFISFMAIYVFLLLIAISIVNCCILFIFSYINKFYVIL
ITLLIIAGLYFSTIYINIINLFRKYYNLIGFQFNNLVAGLLSFLIIMFILNGISYLLIKKKVSL
>gi|260686870|ref|YP_003218003.1| hypothetical protein CDR20291_1507 [Clostridium difficile R20291]
MKLKSKISILIIFLTLAIYFSIGLLNNEDNLKIKTIKGDSNELDHININFGYALNGYINSYYTINGSNKT
KKTELIKLQKDSKNTNNLIDVSSGSDLIAHVGFEMNEESKDINFVIDEKKEDLEKGVFPSEGSDKEIEYE
KLDMNNFTRTRYKVDKSTDDYYANILASKRYKKYLYVSVLYATSDSSENNKEYSSTIDIIKINPENKKIK
TIKSINLSNYFSEKYQDIENIGVSYASKYEDKMYILVNVLNTNIGDNSNSKFHLLEYNLEENKESIMELK
TDSKMALAKAKLEANKLYMVMSNDYDNSSITELNLLTYNILDKSLDEDKYVLDNREKRGIRSIEIDSNKI
VAYTSRLNSILSWDNKFMLYIINKNSKEIVYEGELQFNSSNSMLEFEIK
>gi|260686871|ref|YP_003218004.1| hypothetical protein CDR20291_1508 [Clostridium difficile R20291]
MKDLIRLFEFELKRNIKNYIFIIICCCSFVILNIVKNLNDYNYIIENAVKSEQLTKIGNTIETVNVTGFS
SFRNIMGSTESWFIFGIIACICYAFFIWYRDFNGRSKSIYTLIMLPKNRINIYISKLLNILFLVYSYTVV
LTISLFIASKLLPRHMLGNVTNYGFVQETIYELKMLLPYSFEILFVEYIFLLIGFVSVVFTSILINKSIY
KVSTLISFLFLVLEILVFIISIEFIIPYEYSDVFTVLYSSINIFVCSLISNKLLKQKIDF
>gi|260686872|ref|YP_003218005.1| hypothetical protein CDR20291_1509 [Clostridium difficile R20291]
MKAKNIGKYTICFIIVCFLMITMTLILSYFNKDKLSVKTLKGNVKDIGRVSVVYTPNISKFSYEEVIISK
NGVRNNKNPKSRIRNDYLNIDKKYSDFVNDKGKELIYKDDLNIGEAYTSVKSDLVQGMNALNDCIKVSNK
NLKSGVEENFDINLNKSDFKENSWKTLFNKIYKGNLYMVISETNISGSKVNNICILKIDIKNKSYKLLNR
FNLGLQNGYQQNINEIKFSIGSKLYLEIVNNKSKNGDIEGHDSYSNLIIYDIEDNTFNISNKFMDNLNKE
KNANPKEIGLLSKTKLDYMIKNNKLNLIVTDMSNSIINLVYDINSNEIKLEDYEILDLKVDYNEASSGVR
KVKLLDDKIYSISGMKNSISGELKGFKGIVDVVGTKPVKFQVFDMKLKKNIYEAELINGDISLQEKLFFV
AN
>gi|260686873|ref|YP_003218006.1| putative amidohydrolase [Clostridium difficile R20291]
MNKKYIKAGNLIDGTGNSIMQNKGIIIDGDTIVEIEDIRDDLNGYDVYDYLDKTVMPGIMNCHVHLTMEP
VGNPKIYYDNVSDVELVVNTIKQVDAYLDSGVTYIRSLGCPKYVDVQLKNLIDKGSIDGPGIVTSGPVIC
MTGGHGYYFGIESDGVDECRKSARTVLKNGVDCVKIMATGGVTTDGVEPGSPQLTLEEMKAAVDEAIKAG
KITATHAQGRTGIKNAVLAGITSIEHGVYLDDEIIDLMLERGTYLVPTVAAPYFILNAGKESGITEATLR
KCEIVAIPHKESFLKAYKKGIKIAVGSDAGTSYNEHGKTYYEMKLMSDYGMDNMDIIVAATKTASELLRI
DKNYGTLEKGKKADVIVVNGNPVENIDVLADVLAVFKLGKKVR
>gi|260686874|ref|YP_003218007.1| hypothetical protein CDR20291_1511 [Clostridium difficile R20291]
MYLVENNKCREDFRFTQEYEEDYPNTNERYYENYQVADRYYNYPNKYKEPKIKQCCCKKSMREALELLRY
DALRPFVNFNQFAFISDFFIVGANLVGIDLSAPPKDNLSGLDGTFERFSACNCDLIDIAGRVSYPIPVPL
TLEGLINTIGTIPGVAELIALIDAVIPPTIDLGAILDAILAAIIDFILAASTPLANVDLASLCNLKAVAF
DITPADYEDFIASLGYYLDKKHYKECNCNCDCDDCCCNKGILDNLYMSNINNQVTVVAGSLVLTGVEVLG
KKNDVIVLGNSNDSRIYFVCVDSIDYIA
>gi|260686875|ref|YP_003218008.1| putative sodium extrusion ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MIEVDKLCKSFTRVVKDDKNKSSIRKLKKVKTKKEEFFAVNNVSFKVMEGEIVGILGPNGAGKTTLLRML
GGILTPTSGSINISGYDYSIDRNSAKKEIGYLSGNTKLYGRLSPRELLTTFASLYEMSKEDIEESIENIV
KIMDMSEFIDNRIENLSTGQTQRTSIARCLIHSPKVYIFDEPTLGLDVLSSASIIDFMKNEKLRGKTVLY
STHYMEEAETLCDKIFMIHNGKIIASGTPQSLKEESGVNNLRDVFIKLARKEDI
>gi|260686876|ref|YP_003218009.1| putative sodium extrusion ABC transporter, permease protein [Clostridium difficile R20291]
MRSKIVKYIFKKEMLDILRDKKTLFMMIVVPLLLYPLLMLLMIQVMNMSASSMNSKDINIAFNNKPNKVL
VSMIEDDNLEKDTKNTSNDKGKIRVLDVDNYKKSLEENKIDAYIKMEEKKSSINYQIYINSSQENSSNAL
KRIETVLDKYKRFTIEKTLSEKGLDVQATLEPITYSTVDVAKTEEVAGYFLGQILPFILIIGVLLGSIYP
AIDVMAGEKERGTLETLFTLPISNLELVMGKYMAVSLSAIVTAILNILSMGLTMAFILVSGGISSQFGFG
NFNYGDLVLPIITTLICICLFSMVVSAISMCVCSLAKSFKDAQNYITPLMLIIMIPSYVSMIPNIVLDRV
TAVIPVVNISLLIKSVLSFKSDLNLIALVLASNVAFVILAIILLSKMFNSEEILFGNSKSFSFLEKRSNI
KKGSIPTVSDGVILYAVGLVLLIYVGSLVQIKFGMAGIIMTQFMIISLPLLFACYIKADFKEVFSLTVPK
LKHVFGSIVLWIGGYILIMIITQLILFLFPQNMEVAESLNKALFIKDSVLLNLLAIALLPAICEELFFRG
FIFSSFSKSKDKNKSIKLAIICSGVLFGIMHMDFIRIIPTSILGIIFAYSVYKSGSIFVSMLLHFLNNSV
AVVLNHYTTGNITNLYKFVEVDFSNLNVLKFALILLISLILIMLGLRVLDRKSLRN
>gi|260686877|ref|YP_003218010.1| putative signaling protein [Clostridium difficile R20291]
MRNLQKKLMFFLFICIILQITYTTPVYSLCKLYKNNSINNFESIVSNNQFISKYAIQIILIMAIICMMLI
FYIIYDKLNFKIKLQKIAYTDNLTGANTIDKFVIDANKILCKNTQVKYALLYIDIDKFKYINDLFGYEVG
NEILRNLTKIIKSNIFEEEMFARISADNFIIIMKYIEEEDITKRLKTIFEELDLFNNNQEEKYKLVLSCG
IYFILPEDRDINSIIDRANIPHKMAKGGHKSSYAFYDNKIHDQEIKEKEMENTMFSSLENKEFIIYLQPK
IDLNTGEIQGSEALVRWKRPDKGLIPPNEFIPFFERNGFVINLDLYVLEEVCIYLRKWIDAGINPVTVSV
NVSRIHLYCNNFIETYKNIIDKYNIPAKYIELELTESIIFDNFDILIDIMNNLKKIGFLISMDDFGSGYS
SLNMLKEIPMDILKLDQKFIMETYNSKRSKIIVTKVIEMAKELGMKVISEGVETEEQFKLLKEVKCDMAQ
GYLFGKPMPIEEFEHLIVSNLVRG
>gi|260686878|ref|YP_003218011.1| GntR-family transcriptional regulator [Clostridium difficile R20291]
MEWELDNNKPIYIQLVEHLKLKIISGEIKIGSKLETVRALAEDAEVNPNTMQKALTELERQGLVYSQRTK
GRFVTDDKEKIKAMKEEIANVEINTLKVTLEKLGYDRDEMLKLITENLKGEL
>gi|260686879|ref|YP_003218012.1| ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MDKNISNVSQDGIVEFKGVNKSYGTKNVLKNIDLNIPKGKIVGLLGPNGSGKSTMIKLMNGLLQPDNGEI
MINGMKPSIDTKKIVSYLPERTYLNDWMKVSDLLKFFYDFYSDFDVRRANEMIKSLDIDVNEKLKTMSKG
TKEKVQLILVMSRNASIYILDEPIGGVDPAARSYILKTILKNYSEDSTLLIATHLISEIENICDEIIFIS
KGEIVLQGDVEAIREEKGKSIDALFREEFKC
>gi|260686880|ref|YP_003218013.1| putative ABC transporter, peremase protein [Clostridium difficile R20291]
MLGKLLKYELKASGRIFIPLYIAILIVAVFNGIFMNTNILQVQGIGILVLTSLFMALGVLTIVVTIQRFR
KNLLGDEGYLMFTLPVSTSSLILSKCITALIYAVLSFIVAVFTFGVLMLFGTSGILLPEILDLFNTSFKW
ISENFLDILLLVVVMFISYSSFILLLYTSISMGQLPKFNKHRNIVAFASFIAINIVISIVGDAVGSILPN
EDTNMVYHLYQSPSFMLAILGSLVVAIALFFATKFILDKKLNLE
>gi|260686881|ref|YP_003218014.1| putative permease [Clostridium difficile R20291]
MKSYTKAKWSVWGIITFSFVLVLFLRMSTAVVSDNLANELGFNSIQISNIASFCLYAYAFMQIPAGILID
KYGARKISSLGIIMASLGSILFGLIQSIELAYISRVIVGAGTSVILLCILKIQGRWFNKSEFASATAKFS
FVGNLGGVLATFPLVFLSELVGWRNSFLLIGIIGVVIGCFIYIIVRDTPKEYGFNVDTEPYEKSEKVNIV
DGIKSVIKNKSTWYNSMIMFSFVGLTSAFISLWGVRYIMDVYGVSKSFSAFIVSFFTYGFIFGSIIMDFV
FAKIRSSKFNIIKFGAMIDLFIWIVIVVVYQVKPPIIVLPISFFIMGCIVMSHLQVFNDAKYKNKEIYSG
LATSVINTFEFIGSGIINLIIAISLQVNSYNIVDGYKKGFVVFIVLSIITIVSSHIGVKNDDCKAI
>gi|260686882|ref|YP_003218015.1| putative mechanosensitive ion channel protein [Clostridium difficile R20291]
MDTTKIDDISKLDLNNLDINKMDMGGIMESLLEWATTSGVKLIIGILILSIGFKIIKKFVNHVMLVLSKR
DIDLTLRRFLKSLLLSVLKVAVIIIVLEYWGMSLSSFAAVIASAGVAIGLALQGSLSNFAGGFIILLIRP
FKVGDYVEAAGHGGTVEQIGLFYTQLVTPDNKQILIPNGSVSNDSLINYSAKNTRRVDLTFSVGYEDDIL
HVRRVLKDIVNNHKLIINEPEPFIGVVEHGDNAVKFATRVWCKTEDYWTIYLDLLEEVKVRFDEEGITIP
YPKMDLTVKELNKI
>gi|260686883|ref|YP_003218016.1| putative lipoprotein [Clostridium difficile R20291]
MCKKTYLLVVSILIAGLLTACSGSPTKDSGQAQDNTKKEANASNNALKDEKNNENLMEQDFKVPYTDAIN
IFKDKYKDADIVDLSLERDLNKFVYTVEGVDDNNEYKMKIDANTKDVLEDKTEKLDSEDLNGVARKEKLD
LNDIITPQQAMEIALKEQNGMVKEWSLDKDLDVTFYKIRIDKDKNEYDIKVDSKKGTVLKVEKED
>gi|260686884|ref|YP_003218017.1| putative nitric oxide reductase flavoprotein [Clostridium difficile R20291]
MSLKSLKIKENLYWVGSLDPDLRVFDIIMYTPYGTTYNSYVLKGTEKTVLFETVKDKHFDNYIERLNDLN
IDFEKIDYIVVSHTEPDHAGSVEKLLDLAKNAKVVASETAIKYLKEIVNKDFEYVAVTDGDTLSIGDKTL
EFFSVPMLHWPDTIYTYIKEDKTLVTCDSFGSHYSNDKIVNTLDENEEKDYLDALRYYYDCIMGPFKPSM
VTAIEKIKDLDIDTVCPGHGPVLTENPRKIIDLYYNWSVKEQIKLEKEVTICYVSAHGYTKIMAEAIKAY
IEKNSNYKVNLFDVIEHKQEDILAKIAVSQGVLFGTPTILGDALKPIWDILISLNPVLHGGKVASVFGSY
GWSGEGIENAMERISQLRMTAVKPFAVNFKPSNEEIDKLHSYTGKFLDKLNSTFGSKKKTKKFKCVICNE
VFEGDSAPSVCPVCGAKEDQFIEVEEDEVTFRKDTDEYFVIVGNGAAGFYAADAIRKRNKTCKITMISNE
DELTYYRPALSDGINEELGSDFYMEDKDWYDKNNIVVILGTNVDKLDEVNKTIIVNDGAIKFDKLVIATG
SRNFIPPIKGHDLENVFTLRNIKDLYSVKEALEKSKKVVVIGGGLLGLEAAWEFRLKGLEVVVVEAMDSI
LSKQLDKEGSKILEQCVRDTGIDVRLGVAVDGIEGDGKAQKVVFKDGDSVDCDMVVFSIGVRANTQMVQD
TSVKIDRGIVVDKTLQTNVKDIYACGDVAQVGNISLAIWPSSVEMGKIAGANASGDNLTFESEVYPVSLD
AMNVKVFSIGNIQNFDKEISSKDEGQRIYKKLFMKDGSLVGAILINDLSCTVKLIRLISEKGDFEDIMKA
DIL
>gi|260686885|ref|YP_003218018.1| two-component response regulator [Clostridium difficile R20291]
MNENILIVDDEKEIADLIEVYLKNEGFTVYKFYTGKEALECIESKDLDMAILDIMLPDIDGFHICQKIRE
KYYYPIIMLTAKIEDIDKIMGLTIGADDYITKPFNPLEVVARVKTQLRRYMRYNNSYEQQSIIVNEYDIK
GLIINKETHKCSLFGKEVALTPIEFSILWYLCEHQGKVVPSEELFEAVWGEKYLDNNNTVMAHIGRLREK
IHEPSKNPKFIKTVWGVGYTIEK
>gi|260686886|ref|YP_003218019.1| two-component sensor histidine kinase [Clostridium difficile R20291]
MRTALMAFIAIIFIWILYSFILYGKFSIWIVSFFENAFRMEYKAALNLYQQIFRNSMELFMILAMVIVFF
IIFRVYLNWFTKYFSEINQGIDSLIKEDVGEVALSPELLAIEKKINSIKHILEQRKFETQMAEQRKNELI
VYLAHDLKTPLTSVIGYLTLLRDESQISEELRKKYLSISLDKAERLEDLINEFFEITRFNLSNISLEYST
VSLTRMLEQLTYEFKPTLMSKNLKYTLNVTPNMMIRCDVNKMQRVFDNLLRNAVYYSFEDTTIEITAVQE
DDYIKLKFINHSNTIPEEKLERIFEQFYRLDTSRNSNSGRAGLGLAIAKEIVELHNGTITAHSENNIITF
KVIIPIVGNL
>gi|260686887|ref|YP_003218020.1| putative D-alanine:D-alanine ligase (putative vancomycin/teicoplanin A-type resistance protein) [Clostridium difficile R20291]
MNNKKIAVIFGGNSTEYDVSLQSAFAVLENLNTEKYDIIPIGITREGNWYHYIGDYNNIQNNTWFERDTD
IIPVIVSQNRVKNGIIEFLIPDAVSQNHIPNSAIESCENDIKYTKLDFVFPVLHGKNGEDGTVQGLFELA
GIQVIGCGTLSSALCMDKDKSHKLVHSEGIKVPKSILLKYSDKFNVAELSKDLTYPLFIKPVRAGSSFGI
SKIYKKEELQVAVDLAFEHDNEVIIEENIDGFEVGCAVLGNDDLLVGRVDEIELSKGFFDYTEKYTLKSS
KIHMPARIDLDCEKRIQETAKIIYRTLGCSGFARVDMFLTPSGEIIFNEVNTIPGFTSHSRYPNMMKGIG
LSFEEILDKIIEVYIK
>gi|260686888|ref|YP_003218021.1| putative D-alanyl-D-alanine carboxypeptidase [Clostridium difficile R20291]
MNNILLDKNKEDKMTNTILLTKDKVYDGNLILVNAFLPVKTSEDIDLIPVDTRFPSILMKREATNILQNI
LKSICGINEIVPVSGYRTAEEQQDIYSSSLRDNGKDFTKKFVALPNHSEHQTGLAIDLGLKKEVIDFICP
EFPYNGICNEFRKAALHYGFIERYQCKKEEITGISQEPWHFRYVGYPHSEIINKMNLALEEYIEYIKRFS
YTNCLKIEDKEKIIEIFYVPIHTKEEVRISIPEQCVYQISGNNKDGFIVTFWRNRKD
>gi|260686889|ref|YP_003218022.1| serine/alanine racemase [Clostridium difficile R20291]
MIRNKSYAGLDYFRIIAALLIIAIHTSPLLSYSKMADFVLTSIIARIAVPFFFMLSGFFLISTYNYNCNK
LKSFLKNVLFIYGIAIVIYIPLNIYTGYFSMNNLVPNIIKDIVFDGTLYHLWYLPASIIGASIAYFLVKK
LGLKYSLVITIVIYVIGMFGDSYYGFLEKIPLLKNLYGYIFEVSDYTRNGIFFAPVFFILGGIISNKSNY
MSTKNSLIGFLISFLLMLCEGMFLHKLGVQRHDSMYIMLLPCMYFLFTALTFLKGSRARLLRTSSLIIYI
IHPMMIVVIRMFSKIFGIQTVLVDNSLIHYIVVSIASFIASIIIILILKPLKKDLKGEHKVNTNRAWIEI
DLNNLEHNVKMIQKAMPEDCELMAVVKANAYGHSAFEVATCANQIGVKAFAVATIDEGIDLRRYGILGEI
LILGYTNPIRAKELHKYNLTQSVIDLNHAISLNKQKYNIKSHIKIDTGMHRLGFDVNDVRSILKAFKLKY
LDICGIFTHLCVSDSLKDEDVDFTNKQIECFYKLIDFLLKKGIKIPKVHIQSSYGFFNYPNLKCNYVRIG
IALYGILSSPNDTTKLQLDLRPVLSLKSQVILIRKIQKDDSFGYGRVFIASRDSVIAILSIGYADGIPRN
LSCGKSYVIINGCRAAIVGRICMDQLAVDITDIPNVEVGNTAIIIGRDNLSELSASEVANNSCSISNELL
SRVGRRLNVIKK
>gi|260686890|ref|YP_003218023.1| hypothetical protein CDR20291_1527 [Clostridium difficile R20291]
MQYIQELLDLTQNYWVLATIIGLLSAFIESFIPALPLVAIVTANAAIQGLFIGCLLSWIGSGLGTTSLFL
LISRFNDSKLFNKLRNSKTEKAISWMDKQGFKLLFIAYACPFMPGCLVTIASAFGKKDLKDFVPAMLAGK
FVMFIVISYVASDIEGFITSPLKIASFILLVFLSWKIGNRVNKNLENHNYDFHHKKHHNDKDDKMI
>gi|260686891|ref|YP_003218024.1| putative membrane-associated metal-dependent hydrolase [Clostridium difficile R20291]
MFIVTIQEDFYMIKETHERGGYIFALLILPFINNLYLVKYDIAYKIVLIIIYIYFAYLGSLFPDIDMRGS
YISKKFMLIYKLFGSRFRHRGFTHSLIALLLIYSFFKSLTIFTNNNIVFSCLSSGFIIGYLSHLCLDLIT
KEGIELFYPITINISLLPIKTNSKTEKFISKLLNFIVIFLIGYQFYILL
>gi|260686892|ref|YP_003218025.1| putative superoxide dismutase [Mn] [Clostridium difficile R20291]
MKKKILIPVIMSLFIISQCITSFAFTPENNKFKVKPLPYAYDALEPYIDKETMKLHHDKHYQAYVDKLNA
ALEKYPELYNYSLCELLQNLDSLPKDIATTVRNNAGGAYNHKFFFDIMTPEKTIPSESLKEAIDRDFGSF
EKFKQEFQKSALDVFGSGWAWLVATKDGKLSIMTTPNQDSPVSKNLTPIIGLDVWEHAYYLKYQNRRNEY
IDNWFNVVNWNGALENYKNLKSQD
>gi|260686893|ref|YP_003218026.1| asparagine synthetase [Clostridium difficile R20291]
MDGNISIYYKGDISKKEDIKFKIKESVNNTRLSSRIEYKDEEKTFDFERFNVIDAIYGNKPFEKDGKVIV
FNGNIYNYHEIKEELIKKGHNFTTNDDIEVLLASYIEFGKNCVHKIKGMFNFIIYDRENESIFGARDLFG
IKPLYYINKENAIIFSSEYKFLLEYMKNLNINERSLQSYFSFQYVLPEDTMIQGIRLIPAGHYFRVENGI
LSLKRYNKLEFRSSTKFFYTKNHLGNRDVNEDDIRNIVVDSIVTHMEEEKEIGTFLSGGIDSSIITTVAS
QINPNIKSFSAGFSVKGYSELEVAKKTADKLGIENIQINITQDEYIKSLPNVIYSLDDPIADPSEVGLYF
LIKEAGKHVKVALSGEGADELFGGYNIYKEYSTMKSVVNSPTYIKSILGRVSELMPNIKGRNYLYRATTP
LEKRYIGNAKVFENSEVKRFFFKYKEKNIYEYLLSNLYRDAQKNNYDYISKMQHIDVNTWLQGDILQKIS
KLSTAEQVELRVPFLYKDVFDVAKNLRMEQKINKNNTKVLLREAFREIVPEYVVQRKKLGFPTPIRVWLK
DSLGDIVKETIYNSNVDEFIDKKYAIKLLDTHLKGHRDNSRKIWTIFTFCLWHQLFIEHKNVEY
>gi|260686894|ref|YP_003218027.1| putative serine protease [Clostridium difficile R20291]
MICTIKPLKISIKKSTEPLIEFISDTTYKNKSSSYIKEVHFTRYIGVDDSIDKYIEKVKNIDTYFFNNPT
IPYIRLNNLKINFDKEQTDKMLKIFNIYDSSKFNSWDLYNIDFPCKIENDTLNWTKKIAFKNTLDLFSTS
MPNCTSSIIKNFAVKLLCWMDYFLPKLFYNKVKTTISPKIVYFGNIKRQELFFLYFLSQLGCDILYINPN
KDILDLYPECSKFSTLFELSRKTPNILEIPFERHITNINYSENTNKTSPTTNKPNSKNTLNNTNLTSKKI
AQDEEVELSYEDLAKLSASVVMIVVCNNENKPFKSGSGVVINNEGYILTNLHVVNDGYSFLVRFENDDKV
YTSYQIIKYHSDYDLAVIKVDRKCKPIPVKVSKKPVRGQKIVAIGSPLGLFNTVSDGIISAFRDFETVQM
IQFTAPISSGSSGGALLDMFGNLLGLISAGYDDGQNLNLAVESNLVKIFANNFIEIVN
>gi|260686895|ref|YP_003218028.1| tellurium resistance protein [Clostridium difficile R20291]
MGITLSKGQKVDLTKGNPGLKNILVGLGWDTNKYDGGFDFDLDTAAFLTGASGSVTNDGDFVFYNNLKHT
SGAVEHLGDNRTGEGDGDDEQIVVDLSKIPGEISKISFTVTIHDATERRQNFGQVSNSYIRIVDKDTNEE
LIKYELGEDFSIETAIVVAEIYKHNGEWKFNALGSGFEGGLAALCGNFGINL
>gi|260686896|ref|YP_003218029.1| tellurium resistance protein [Clostridium difficile R20291]
MAIVLKKGQKIDLTKGNPGLKNIKLGLGWDTNSFDSGYDYDLDVSVFMVGESQRVEKDEDFIFYNNLRHP
SGAVEHLGDNRTGEGDGDDEEILVNLETMPKHIQKIAVTVTIYEAAERRQNFGQVSNSYIRVLNSENDEE
ILRYDLGEEFSIETAITVCEIYKYNGEWKFSAVGAGFEGGLEALCRNYGLNV
>gi|260686897|ref|YP_003218030.1| tellurium resistance protein [Clostridium difficile R20291]
MSINLSKGDKIDLKKSNPGLSNILVGLGWDPVQQSGGGFFKSLFGGGQADIDCDASVFMLNQEGKLSGIK
DLIYFGNLKSACKSVLHTGDNLTGEGTGDDEQILVNLDKVPSNIHKLLFVVNIYNCVDRKQHFGMIENAY
IRVEDQGNKKEIAKYNLSDNYSEKTTLIVGAIYRKDGSWQFKAIGEGTKDAGLKEVMQNLDRIECAYGI
>gi|260686898|ref|YP_003218031.1| putative calcium-transporting ATPase [Clostridium difficile R20291]
MHMEFNNDIKYYNVDKEEVTKDLSVNPEKGLSESEVKTRREKYGLNEFTPKEEGSFWDDLKESLSEPMIV
ILIIAAVVSAVIGETHDAIGIVGAIAIGIAIGMITEGRSKKAAEALSKLTENIEVKVLRDGEVHQISKSE
LVPGDIVYIETGDMVPADGRLIESINLKIREDMLTGESDDVSKKCDVVVSMEEIESKGAVVVQEPIPAKQ
INMVFGGTLVAYGRGALVVTSIGDNSEMGKIAQNLSETDEQTPLQIKLGNLGGLIAKVSSAVAGLLFIFM
VFQMISKNVLNVDMSGILPFLESIDPVKTAFTVCVALIVAAVPEGLPTMINMTLAITMQKMAKINALVTK
KEACETIGSVSVICSDKTGTLTENRMTVEVAYVDGRYIESSEEEINSYFEENCMINSTADVEHNDGDIKY
LGSATECALLLYYKNVDYRQVRKNSNIVAQNPFTSDSKRMTSVIGQDNHHVLLSKGAPEVLLELCSHIQR
GKDIVPLTENIKHEILEEIKKLQIKSMRTLGFAYKEISQAEEEAAVTAESDAMNVSAMENNLVFSGFVGI
RDPLRKDVIESVNTANKAGVSVKMLTGDNINTARAIGEELGLLKNNMRVVEASYIDTLDDEELKQEIQSI
SIVARSKPDSKMRIVSALQKSGDVVAVTGDGINDAPALSKADVGIAMGISGTEVSKNAADIILTDDSFST
IVKGIKWGRGIYDNFQRFVQFQLTVNVIAFLVAIISQVMGQEMPFTTIQLLWVNIIMDGPPALALGLEPV
RDHVLNRKPVDRKANIISKSMVYTIVLNAFYITAILMLQSTFNFLGVDEAHKGTVMFALFAFSALFNAFN
CREFNADSIFPNFTHNKLALQIIVLTGIAQVIFTQLFQDFFNSVAMDFMTWVKVLCVAASVIVVNEVVKC
IIRLVKPKKTA
>gi|260686899|ref|YP_003218032.1| hypothetical protein CDR20291_1536 [Clostridium difficile R20291]
MGDSKVFEKIFSSQSDRGNYTPSKGYLSYFISYIGLEDEVLYNLEIFKTKQNIDSKKDIALFTDVIANPS
DFDIINYFKSGLQKYRTSMEDVDINILGFEEIDYKIKQAMDRVLKEEEKEFTNDRVKQNFIVKIMAWIKI
YIGALDINKNEAPKVIFYGDIKKHEVYLLLILYLAGFDVLYLNPNSKSNIDILKSERYNIEFEEANIIEE
KISFEERVILGEKIDKSSVKKAFTVGAEASKRISEELLNDAGFIKPWQLQDRKIKNLLLSSTVDEISIYW
NQPLKLRPGFKFNDAIVEAPNFLSKINGIYNDKNEYIKFLDLLRDSESSTFIEFNGDVDRFSKAFTREAF
SLSFLLDSKGVIDKNSVLNNKDYSISTLALNQQIMILEKVEELLEGSMFLNGLSGEDKIKGLFTVLHMDK
KFVHMMNNFDYSLINPKLIIYMYKSIVFDKEIVFLMLLLSKIGFDIIILCPGGENNIENVINNQLIDIHR
LDKMVYDLKLNSLENDIPLLKKIFGKRRRF
>gi|260686900|ref|YP_003218033.1| putative tellurite resistance protein [Clostridium difficile R20291]
MGININSFSKDKNSVEVTENLPTAVQEENFDIMEYTNNKKNELRKSKEVEALTSLIEVENPDTILQFGRK
ASEGVARVSDSLLNTIKLNRNEENSKMLVHLTKIMDKFDLDDFQETKEPNFVQKLFKKANNAIEMMFQKY
ETLGGEVEKIQIELEQYERDIALSNKQIGAMLNENFEFYNELQKYIVAGEMAIEEMDNEILPFFKQKSET
SGDQMDVVNYQELLKVYDMLNQRVYDLRIAENIAIQTIPMLRGMQHNNYGLIRKINSAFVVTLPVFKQCL
SQAILLKKQELQAKSLKALDDKTNELLLRNAQNVSTQSAQIARMAGTSSVQIETLEKMYNTIKSGIDETM
RIEENNRALIKDNTKRLEELNTTIIYNK
>gi|260686901|ref|YP_003218034.1| hypothetical protein CDR20291_1538 [Clostridium difficile R20291]
MKYFDYICKDDLERIFLKEPEDFSAKTEKDVLKYALGAFLYVPATQYNMIYKSIIGDVKGVRPLAICLED
AVGVNGELEAIENLRLILKNISNESITNKDGIPLIFVRIKDVEQLLRIKEIIIKNSHSITGILIPKANSE
LIENCIEALYSMNLQDMYVIPIIETREFIYNEKKELSFTNLYNAILRHKSRILSIRVGITDILGMYGIRR
DKNFSIYNNLICSSFILDIITYLQRPELDIPISGGVSEFFDMTNKDIRNKYIEEILLDKYHGLIGKTVIH
PMQIQIVQALSTVSYEDFTDALDILDSTDSKYGVSKGVLGERMNETNPHFLWAKKTLILSKIYGVLNKGV
DYEELLKF
>gi|260686902|ref|YP_003218035.1| hypothetical protein CDR20291_1539 [Clostridium difficile R20291]
MKNCLNFNCEIDIIDNPLNLELNDFLDVGVRNNSKRRFLFISKKLGKHLACKPSEMDNLGKLMATIYNEK
NKEESNGTVIAFAETGTAVGHSFFDYLCGDYEFIHTTREQFDELENLEFLEEHSHATDQNLYFGMLNNFK
FGDEIILVDDEITTANTCMNIIRKIQSIYPKKKYTICSILNWVSDENLSKVTRLERELNCKIDFVYLFKG
NFKFYIDEDIISNYNDNYSITKLETISSDKVNLVVNHIYVDLEDYIGNKKYVKYTGRFGINRREQFRLKE
IVKRESKKITMASKESLKNEKEKILFLGTEEFMYIPMLFAKEKENQYDIYYHSTTRSPIINIDKKHYPIK
SKFMLKSFYNIDIQNYIYNIDKHNFSKCYLFVELNKSENSYLEFIDIIKKTSIKELTIVCCS
>gi|260686903|ref|YP_003218036.1| hypothetical protein CDR20291_1540 [Clostridium difficile R20291]
MRDFSTYSKDDVIFLLKDISNLIEEEGNKERELKIQNGRHYSEMIPIEYEVSEDYLNLYHEKLRENKDKL
AFSIGVMCEKIIKKNGNDVVLVSLARAGTPIGILAKRYIRSKYNVSLPHYTISIIRDKGIDMNAIEYIVK
NHPSSKIQFLDGWTGKGTISKELEKACDELNVKFKKHFDSTLAVLADPAGYSGLYGIREDFLIPSACLNS
TVSGLVSRTVLREDLIGKNDFHGAKFYRHLKDKDESMNYIETIEECFKNQFKNISDEVENWESDIITRDG
YFDVLNIKEKYNITDINFIKPGVGETTRVLLRRVPYKILVKDLNDKSLDHIFILAKEKNVEVEQMDLKAY
KCCGIIKNMKDI
>gi|260686904|ref|YP_003218037.1| hypothetical protein CDR20291_1541 [Clostridium difficile R20291]
MIVFSDLDRSIIYSNKFLNADSKYANIEIYREKEISYISLDTINLIKQIQYYGMFIPTTTRTVEQFKRIE
FNKYGIYFPWSITSNGGVILKDNEILKSWSEKIDKLKPDYEPIESMIHKFKDYLNVDGITNFKVAEDTFF
YIVVDFSRFNLDSIKEYTNILESKNWKFYVSGRKIYFIPKEISKENAIKYLTKELGIEYFYAVGDSIMDY
GMLNISNKSYVLKHGDINKNEIENSFISSSFKGMSGTEEILSNILDENCLLNI
>gi|260686905|ref|YP_003218038.1| putative transcriptional regulator [Clostridium difficile R20291]
MNIDVGSKIRSLRKSKNISISTLAKNSDLSTGLISQIERNMVVPSIVAMWKISKALDINIGYFFEEIGRE
DSDIVVKKNNRKKIVTNDSTKFYELLVPNLSGKKIEFILVTLDGHTQKNSEFVTHEGEECGYIIKGKMKI
TLGNKEYLLEEGDSFYFNSTIPHVYENYDDEVCISVWAMTPPSF
>gi|260686906|ref|YP_003218039.1| hypothetical protein CDR20291_1543 [Clostridium difficile R20291]
MEVIKMKSFVSPDNIWVLWAVVTGWAAFSIYLEQKYNWASKVSGAIIALVGAMLLSNLNIIPVESVVYDQ
VWGYVVPLAIALLLYQCNIKKIWKESGRLLIIFLVGSVGTVLGAMIGFLALKNVVPDLNIVAAMMTGSYI
GGNVNFAAMSGAFDAPGELVSATVVADNLLMALYFFVLIAIPSIGFFRKHFKHPHVDEMESIGITEGETV
AANYWGRKEISLKDIAIAIGSAFIIVAVSVELSTWFKAIIPLSNPFLAMLNTLFGNQYLIITTLTMLFAT
FMPNFFGDIKGAQELGTFLIYIFFVVVGVPASITLIIQKSPLLLLYCGIMVLINMLVTFIVAKIFKFSLE
EAILASNANIGGPTTAAAMAISKGWSKLVGPILIVGTFGYIVGNYFGLLVGNILI
>gi|260686907|ref|YP_003218040.1| putative dipeptidase [Clostridium difficile R20291]
MIFDGHSDTWADVTIRRLNGEKDVFRRIHLDNFKRANIEGAIFVIWIDPPYDKEPEKRVKQIISSIKDEI
EDMKDVVNIVKKYSDIDKGISENKINILIGLEGLSHIGRNIDLLDYFYKEVGARHASLTWNEQNELATGC
LGDENRGLTEIGKKAVNKMEKLGMIVDVSHLNEKSFWDLMSVASKPVIASHSNARSLCDAKRNLTDNQLK
EISNTGGLVGINSFRGFTNSNPKKQDLIHLVDHIDYMVNLIGIEHVSFGFDFSDYLGKETIGSFTGNASV
PSVDGLESTHTAQNIVVELENRGYKKKDIELISSGNFYRLFKDILK
>gi|260686908|ref|YP_003218041.1| putative iron compound ABC transporter, permease protein [Clostridium difficile R20291]
MKKRYLVIGIIILSYFSLFIGAEDINIMHIFAKNQHKLMIFIMSRVPRLISILIAGVGMSIAGLIMQQIS
KNKFVSPTTGATIDAAQFGIVICMLLVPTASIFTKTIIAFVFSLVGTFTFMKIIGKLQFKNIIFVPLVGI
MFGNIIGSMTDFIAYKYDLSQNVSSWMQGDFSMILKGNYEILYITIPLIILAYIYANKFTVVGMGMDFAT
NLGLSYKRIVNIGLIIVALVTVCVVVTAGNIPFIGLIVPNIVSLYMGDNIRASIWYTGLLGAVFVLICDI
FGRIIIYPYEISIGLTVGVIGSILFLYLILRRNVNEA
>gi|260686909|ref|YP_003218042.1| putative iron compound ABC transporter, permease protein [Clostridium difficile R20291]
MKLSLNQKIYFVSILLFISIALFIIYGIDMNHLEYALSQRIPKIFAMVLGGGCIAFTTVVFQTITNNQIL
TPSVLGLDSLYVMIQTIIVFIFGSSSSLIINENYNFIINVAMMIGASLLLYKMLFEKNKNNIFFLILVGM
IFGTLFKSATTFIQVMIDPNEFLALQTSIMASLNNINTNVLLIAFIIIIAIIPFIYDEIKYLDVLSLGKE
QAINLGVDFDKAVKKMIILIAILVSISTALIGPMTFLGLLLANITREIFKTYKHTYLISGSMLIGMITLI
IGQFFIQHVFKFDTTLSVVINFIGGIYFIQLLLKGANR
>gi|260686910|ref|YP_003218043.1| putative iron compound ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MIEIKNIFKRYKNKNVVDDVSFSIEKGKITSFIGPNGAGKSTVLSIVTRLIGGDGGEVIIEGKSLTNYSN
KELAKKIAILKQSNNITLKLTIRELVGFGRFPYSEGNLTKEDENYIDEAIEYMKLTDIQHKYLDELSGGQ
RQRAYIAMVIAQDTEYILLDEPLNNLDMNHSVQMMKVLRSLCDELDKTIVLVMHDINFASCYSDNIVALK
NGKVEKVGRTDEIVNEKVLEDIYEMNFNIKNINGNRICIYF
>gi|260686911|ref|YP_003218044.1| putative iron compound ABC transporter, substrate-binding protein [Clostridium difficile R20291]
MNKKAAIVAAVAIIGLVTVFALGGSKKNESKTSENSNNTIKITHNLGETDVKLNPKKVVVFDYSALDTMD
ALGVAENLVGLPKTSLPASLEKYKDKKYADLGGLKEPDLEGIKSANPDLIIINGRQEDFYEQLSKIAPTI
STSKDDKKYLESVKNNIDKIAKIFGVEEKANQEFSKIEKKIETLNKKVTDKNLNALTIMVNEGNLSVFGE
ESRFSILYNSFGFENKDKNIKESSHGQNITFEYIAKQNPEVMFVIDRGIATGSDVKESSTAKSVLNNDII
KSMDAYKNDNIIYLDSPTWYVNDGGLTSLNKMIDDASKAVN
>gi|260686912|ref|YP_003218045.1| putative signaling protein [Clostridium difficile R20291]
MKEQNNQLLSISEEFFSLANDTVFKIENFSKEKSNYLMTLIIIISIIGILACIILILQYSKKMVRLEKLN
VDLKNIAYKDELTGVNTIEKFKLDANQNICINKDKKFAVFYIDFENFKYINDIFGYDYGDMILKRYANLM
MNDIGKYEIFAREIADRFVALRCYVDKEDLVVRQRDVDNELINITNEIKNKHSITVVSGICCIEDVNEKL
SIDGLINRANFAQKTVKNKPGTNYAFYNDSIRKKMIEENTIKSRIHEAIEKREFIVYLQPKVNLHSQKIN
CAEALVRWLTPDKGIISPAIFIPVLEKNFFIALVDKYVFEEVCKWIRKRLDENKPFVQISVNVSRIQFYN
TKFVETYSNIQNKYRIPKNTIEIEFTESVAFENQKHLLEIIHDLHENGFTCSLDDFGKGYSSLSVLKDLP
FDVLKLDSMFFKASLDKDKEKIVIKNIVHMLKELNITTVAEGIECKEQVEFLRDIGCDLVQGFVFYKPMP
ILEFEEILDKEFVYNS
>gi|260686913|ref|YP_003218046.1| putative tellurium resistance protein [Clostridium difficile R20291]
MAIELKKGQKINLTKKENSDLGEILVNLNWNQKVQKKGFFGSLRSSNIDLDLGCLFEMKNGVKGAVQALG
NAFGSLDNPPFAQLDGDDRTGSNTQGENLRINGNKIKDIKRILIYAFIYEGVANWSEADGIVTIKQKQDS
DLVVKLDEHKNGYNMCSIALIENVNDETFSVEKVVKYFKGHREMDTEFHWGLKWVAGRK
>gi|260686914|ref|YP_003218047.1| putative lipoprotein [Clostridium difficile R20291]
MKFKKLLCLLLCLVLTLAVVGCSKAKDDKKIVVGATLVPGGELLEELKPLIKEKGYTLEVKNFDDYILPN
EALNNGEIDANLFQHEPYLKEAVKAKGYKIMAGKKLYVCPAILYSYKIKSVDEFKKGDTIAISNNPSSCS
KNLRYLESIGLLTLPKGDGLVSPKDIIENPKGIQFKELDIAQIPSSLPDVTAAFIDTTYAVPAGLDAKKN
GIYTAPINDEYANLLAFRTEDKDSEKIKVLQDVLTSDKARSLIEEKYKGIVIPTF
>gi|260686915|ref|YP_003218048.1| putative lipoate-protein ligase [Clostridium difficile R20291]
MLLIYNEKTNPYFNLAMEEYLLKNFDEDLFILWRNEPSIIVGKNQNTLSEINLEYIKEYSIPVVRRQSGG
GAVFHDLGNINFTFIACNNNNFSDFRRFTQPIIDLLKTLDVNAEFSGRNDLLIDGKKFSGNAQYNYKNKV
MHHGTLLFSSEINDLSKALKVKPIKFEGKGIKSVKSRVTNISEHLHSKMDILEFKDAIMDYLSKTNTDNT
NYCLNEHDIKQIEKLTKSKYETWDWNFGNSPKYTLSNELKYSGGNVEFNLNVDKGIITSIKFFGDFFGKC
DVAFVENKLIGIRHEENALRNTLDSIEINDYFLGADTDILVSGILGVK
>gi|260686916|ref|YP_003218049.1| putative Na+/H+ antiporter [Clostridium difficile R20291]
MRNKKINIIFLTTIMFIMSTVMVFAEEDIDTIALANAEKFGILTLIPPLVAIILAFITKNVIISLLIGIL
SGSFIIKASGINVFATFIQAFLDLVDRALVSLADPWNAGIILQVLAIGGVINLVAKMGGAKAIAEALAKR
AKSAKGTQLITWFLGLLVFFDDYANSLIVGPMMRPVADKMKISREKLAFIIDATAAPVAGLAIISTWIGL
EVGLIHDAFESISIDVDAFGIFLNTIPFRFYNILILAFIVISALLLKEFGPMRKAEIKSRSRKISIDLDE
GVEELDDLAPKNGVKLSVWNAIIPIGTLIIVALASFYYSGYTSIMGGDDKALIQLFTNSPYSFEAIKEAF
SASDASRALFQSALVASLVAIIMAVVKKIFTISEAIDVWIDGMKSLVITGVILILAWSLSSVIKELGTAK
FLIHLLSGSLPPFLLPSLIFGLGAIISFATGTAYGTMGILMPLAIPLAYSLNPDMSYVIVSTSAVLTGAI
FGDHCSPISDTTILSSMGAGCNHIDHVNTQMPYAIFTAVITIVFGYIPAGLGLPIYIVLPVAIAAIFVGI
QIIGKKVDEAEIELVE
>gi|260686917|ref|YP_003218050.1| hypothetical protein CDR20291_1554 [Clostridium difficile R20291]
MICLPISIWCISKSIYIVDCEMSTTILYSIIGIIIVALNLKFAQSLIGKFTKWMSNI
>gi|260686918|ref|YP_003218051.1| putative bi-functional glycine dehydrogenase/aminomethyl transferase protein [Clostridium difficile R20291]
MNELKRVSLYNIHKELGAKLVEFAGWEMPLEYEGINKEHEKVRKSAGIFDVSHMGEVQIKGAESEKFIQN
LVTNDISTLKINDIIYTPMCYENGGVVDDLLIYKFGEEDYLLVINAGNIDKDVAWIIKQSEGYNVDIKNI
SSEVSQLAIQGPKAEEILQKITDIDLNSIKFYKSIPSTKVCGCPCLVSRTGYTGEDGFEIYCKNKYVEII
WNEVLKVGGEDICPAGLGCRDTLRFEAALPLYGHEINEHISPIEGGLSIFVKTNKESFIGKSILSKEKES
GAKRKLVGFEMQGKGMPRNGYDIRIGDKTVGFVTTGCASPTTGKILGMGIIDSEYAKVGNEIGIAIRKKV
VPAVIVKKPFYKKQYKKDNIILNKENKFSYIPATSEDKSKMLKVVGLNSVDELFSDIPEEVKLKRDLNLE
IGKSELEVSKIVKRLSEENLSLEDLTCFLGAGAYDHYIPSIIKHITSRSEFYTAYTPYQAEISQGTLQVV
FEFQSMIAEITGMEIANASMYDGATAAIEACIMAMNQTRKSKIVVSKTIHHETLSVLRTYLQYKDCEIVE
IDFCNEYGTTDIEKLKASVDKDTACVLIQTPNFFGIIEEMEEIEKITHENKAMLIMSVDPISLGVLKTPG
EIGADIVVGEAQSLGNPLNFGGPYVGFLASKSKYTRKMPGRIVGQSLDVEGKIAYVLTLQTREQHVRREK
ATSNICSNQALNALVASIYMATMGKEGFKEVGMQSMKKAHYTYNKLVQTGKYKPIFKGKFFKEFAVQGNL
NIETINDKLLEENILGGYNLEYNYPELKNSTLLCVTEKRSKEEIDKLVGIMEGL
>gi|260686919|ref|YP_003218052.1| glycine cleavage system P protein [Clostridium difficile R20291]
MKEYNSLLIDISKKGRKAYSLPKLDIDDIKIEDMIDQDMARQSELNLPEVGELELVRHYTLLSNKNFGVD
TGFYPLGSCTMKYNPKINEDMAALPNFTGMHPYQSSDTAQGSLSLMYDLSRRLAEITGMDEVTLQPSAGS
HGEFTGLMIIKAYHENRGDHKRTKVIIPDSAHGTNPASAAMANFDVIQIASDKNGAVDINALKEVLNDEV
AALMLTNPSTLGLFEKNIKEIATLVHEAGGLLYYDGANMNAIMGITRPGDMGFDVVHLNLHKTFSTPHGG
GGPGAGPVGVKKELVPFLPIPLIERKEDKYVLNYDREKSIGKIKNFYGNFGVLVRAYTYILTMGRDGLKE
ASEMAVLNANYIKESIKDDYILPIDTLCKHEFVLGGLPRGEANIKTIDIAKRLLDYGYHPPTMYFPLIIN
EALMIEPTESESIETLDSFIEAMKSVAKEAKEEPELLKTAPHNTLVKRVDDARAVKKPILTWSQR
>gi|260686920|ref|YP_003218053.1| putative cation-transporting ATPase [Clostridium difficile R20291]
MDKVNLERYSCDINVGLNKNQLQSRIDDNLINAFDNGKTKTYKQIFKDNIFTLFNLINIVLVCLLVSVGS
FKNTLFIFIAVINTIIGVIQEIRAKRLLDNLSVIVSNKVSVIREKEKKEIDVQELVLDDIMILKTGNQIC
ADSKVLNGKLEVNESLVTGESDIIIKNKDDFLYSGSFVVSGEAFVRVENIGKDNYANKIVNDAKISKKHN
SQLRNSLNSILKIVGIIIIPLGIILFAKQHFGNGDSIATSVVGTVAAVNGMIPEGLTLLTSIALAVGTIK
LASHKTLVQELYCVETLARVDTLCLDKTGTITEGKMQVDDIVMLEEVDINEIMGNICNSLKDDNATLNAI
RDKYNVLDTYKAKNLIPFSSERKYSGVTFENKGTYLLGAFEFIFKEKNKKIRIEVEKYSKKGNRVIVLAH
SDSYMEDNNIPEDIKPLAFILILDKIRDEAKETLEFFYNEGVDIKIISGDNPITVSEVARKAGLKTASNF
IDATTLKNDNDIYEAVDKYSVFGRVSPQQKKQMILALKKQNHTVAMTGDGVNDVLALKEADCSIAMASGS
DVTKNVSNLVLLDSNFASMPKVVMEGRKVINNIQRASSLFLVKTIFSFFLSLLTLFFFSRQYPFVPIQLS
LIGAVTVGIPSFFLALEANKSRISGNFLLNILKNALPGALCVTVNVIIVYNIVEYLGYSSSVFSTMCAIL
TGVCGLLILRQQCLPFNKERLFLIVSMTIAFVIGILFLGGLFSFVALSRELILITMALAILMPIMIKVML
FVLDEILETIVPDLN
>gi|260686921|ref|YP_003218054.1| hypothetical protein CDR20291_1558 [Clostridium difficile R20291]
MSEFKNVTAVKKANVYFDGKVSSRVIILPNGERKTLGLMLPGEYTFSTREEEIMEMLAGSMDVKLPGSNE
FVTYKEGQKFNVPSDSSFDLKVNEVVDYCCSYIAD
>gi|260686922|ref|YP_003218055.1| hypothetical protein CDR20291_1559 [Clostridium difficile R20291]
MAHICFEDICYLLLKEAMKLKLIPHNKIVLFEDDLSIGNIFDVNNYELRENIFKIRNVFENNPKLLFKPD
LLEDRKLSKCRNIIIWCANNPKDLCGVYYVVSKFQDKNIKIALVDEKKTEDALIRYSFTSEMSPEDFPFF
LDKTLEIGFNEKLEFKNKWDVLVKENSIFRALVGNEIKSVEETYFDKYILRNISDKWQPLIEVVANCMFE
DEMRVKDWFILWRLEKMASLKIVKIKGSKGDFYSDKEIRKV
>gi|260686923|ref|YP_003218056.1| guanine deaminase [Clostridium difficile R20291]
MLKVLKGNIIFTKTSETFTVFENSYIILEKGKVKGIFKEIPKEYKNLKVVDYTDKLIIPGMNDLHAHASQ
FKNLGMAMDKELLPWLETYTFPEESNYKDIEYATKMYKKFVKELWKSGTTRIAVFATVHKEASMKLMDIF
KEVGLGAYVGKVNMNMNCPDTLLENTQDSIADTEEIINKYSDTDSIVKPIITPRFIPSCTSELLKGLGDL
CLKYNIPMQSHLSENYDEIEWVRSLEPESKFYGDAYNRYNLFGQTPTLMAHCVHCSQDEIDLMRENNVMA
VHCPASNFNVGSGAMPIRKLIDNNIRLALGSDISGGHTLSIFKAMVSAIQLSKLYWVNSGKKYNFLSLSE
AFYIATKSGGSFFGKVGSFEEGYDFDALIIDDSNLNHDNYSILERLERFIYVGDDRNIIHRYVCGKLIEE
PNI
>gi|260686924|ref|YP_003218057.1| putative transcriptional regulator [Clostridium difficile R20291]
MSINTVIAKNLNRLRNERNLSLGQLAELSGVSKVMLSQIEKGDSNPTVNTIWKIASGLNVPYTAILEQPQ
NETFIVSKTDIDVQVSENKDYRLYCYYPNTPTRNFELFQMELEEGHSYTSVGHSEKSQEYIMIIEGQLKL
EVNDSIYQLRENDSICFSAESIHTYHNQGEKTLKAVIINYYPV
>gi|260686925|ref|YP_003218058.1| cysteine synthase A [Clostridium difficile R20291]
MRVLNNVTEAIGNTHMLHLSKIADEFGVQGNIYAKMEYLNPGFSKKDRVALQMITEAENAGLLVPGQAVV
ELTSGNTGTGLAIACACKGYKFIACMSKGNSMERARMMKALGAEVVLVDQMPNSVHGQVSGEDLALVEIE
AQKIAKERNAFRADQFNLEACNHAHEKYTAEEMWEQLDGNIDVFVDFLGSGSTFAGCSKTLKKHNSSIKC
YVVEPETAAIYSGKEITDQGHKIQGGGYSMDLPLVDKKLIDGYIQVTDEEATDVARKLAKLEGVFAGFSS
GANVCAAIKLLKSSEKGKNIVLTLNDSGLKYLSTDLYEEL
>gi|260686926|ref|YP_003218059.1| putative glycerophosphoryl diester phosphodiesterase [Clostridium difficile R20291]
MQKRILRNFIFTGKNILSKLVFIIKYNFSTLILFELFHKGLALFFIWPSIRYIFDILIKSLHIVYLNMDN
FIKVLTNPMSIVLIILSVIILAFYAFFEFTSVIICFNKSIKYEKIGLFELFKISFKNSIKLLYPKNILLF
IFVILIIPLVNTVLISGFIGKIQIPEYILDYIKSDIILNIIYMIFLLIIYISVIRWIFSIHEITLNTENF
KRARKESVNLIKRKIIRTIIYSLILSLVVAIIGYAIYHSGIIFIGIWTKYCTDMEFLKNVFINRCIAFEE
YFRLILSIFIFILDIGFISATYYQYKGVNISKNNIKKEKKSISKIVFNLVLILLISYIESVAFSSHINGM
FNTSFSFYTTAIAHRAGAEMAPENTLAAIEEASNAKADYAEIDVQETKDGELIVLHDSNFKRTTGVDKNV
WDVNYNEVKTYDAGSFYYYGKGYYDEKFVGEKIPTLKEMIKYSKGKVKLLIEIKLNGHEKGDIVKKVVQL
IKENNFENQCIVASMDKTILQKVKKLDENLLTCYFMAIAYGDFSKLNYVDIYGIESTFVNKTVVEKIHKM
NKKIFVWTVNSDSLIEKMLDLNVDSIITDNPYLIESAIYWKKNGFISQVSDYLF
>gi|260686927|ref|YP_003218060.1| putative sugar O-acetyltransferase [Clostridium difficile R20291]
MTEREKMLAGELYDCGDIELLTQWHKAKDLVRDYNQTDSSDLEKKEKILNELLGGKDKNLWITAPYYVDY
GNNIYFGNNCEVNMNCTFLDDNKIIIGDNALIAPNVQIYTAFHPTNAGDRFGNVKEDGSFEFCKTQTAPV
TIGDNVWIGGGAIIMPGVTIGDNVVIGAGSIVTKDIPSNMIAYGNPCRIIRENK
>gi|260686928|ref|YP_003218061.1| hypothetical protein CDR20291_1565 [Clostridium difficile R20291]
MFISLGILVLILMISIFITPVLETERYYIDKEKGCIEDTRSGIDIGNEKFQNKINVLKQFSNQTDTGEFS
KKIELMSKKKLDNLSVNEYKDISFWKVFNYRVTNSLINVGMLIIISIIISNIYVDEVVTSVKDIILSSKE
KKKALKSKIFVALLVPLVIYSVYLMGIFIITCMQQGVPVNGDLESFRIVDNVVALKTNLSITKYVILNIG
IELLMFEGWAMIAIFGSFISKSSISSISFFIFIISITKIMSVIHILPKKLLSVVSNVNYYDLIFGFNKII
GNYLGDIMIFKVNIDIVNIAIGLLMAILIGAMSLCFLVIKSDYISR
>gi|260686929|ref|YP_003218062.1| ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MNKLEIENLSKIYGKKVANDKITVTLENGVYGLLGPNGAGKSTLMKQITTLIKPDEGQILYNGEDIFKMD
ANYRNILGYLPQEFGVYKNFTAKEFLQYIGALKGLRGKYLNSKIGELLDLVGLYDVRNKSIGKFSGGMKR
RVGIAQVLLNDPKIIVFDEPTAGIDPQERARFRNLIAKMSRDKIIILSTHIISDIESVAKETIMIKDGKL
LMKGTHKDILSHMENKVYNVQVKNECEVDDIQSKYKVVSIQSDIDSVVLRIVSEDIPSGDNIQPVQAKFE
DVYMFYFDLEDAREV
>gi|260686930|ref|YP_003218063.1| putative ABC transporter, permease protein [Clostridium difficile R20291]
MMYLVKAEMIKILKSKSVWIIWLFLIFLGFLLIRKFDVLDTYADIFYKIEGSIPLIGLIMFIITSGNYIK
EYDSNMTGLINTTKKGKKSVVLSKLVANGLILSIINISFILLVGIRGFSFFDFKNLNEPIHNLWYFGNSN
LNLTVIQMYIIVILTTIFASFIFAQIGLTLSSIFKSAVIPFILGGLIMAIPYFSVGFIPDKAIKFMSVTP
NWIMMSQQMVRYNVPSILIVFSIVISIILMIVLTKITYENFTSSKRF
>gi|260686931|ref|YP_003218064.1| two-component response regulator [Clostridium difficile R20291]
MENRVLIIDDEVEILKLLETVLKKEGLNNIYTAKTKKEGLELFKSINPDLIVLDIMLPDGEGYDICKEIR
KTSNSPIIFLSAKTEELDKLLGLAIGGDDYVTKPFSPKEVAFRVKAHLRRLSYFSDVQNESKNLNKNEEK
IISFGPYILNESRAELIKDGKSIGLSAKELKILSLFAHNQNQIISKEKLWDKVWGEDYVGFDNTIMVHIR
KIREKLEDNPSKPEYILTIKGLGYKLAVKED
>gi|260686932|ref|YP_003218065.1| two-component sensor histidine kinase [Clostridium difficile R20291]
MKWKITRNFIFTIVFVAISVVIINIISILYVISTNSFFKVVDSGNNPEEFARSFEKDLYEKDGEFKLSKI
GAEKLEKSNSWIQVLNDLGEEVYGVNVPKDTPKKYTPFQMVNNYKYIETKYVNFVLEKYLNKKHLNIIVG
IPSRDISRIILTYSQNNIKKTLNKVIIITLVIDSVVALGVGYLFSRKLTKPISSVLWSIETMANGNYSLY
LKDRGIYEEVFKNINMLADTLRVNEVERKENEELREEWLANITHDIKTPLASIQGYAEIINDKDYEFEED
EIREYTEIIYNKSKYIKDLVDDLNLSTRLKNNTIVLDKKKINLVSLVRDIIIDILNDNRYKNRNIEFESN
EDLIEVYVDSILFRRAITNLIFNSIVHNSEGTLISVEIVKKDNIEIIIKDNGIGISKSDLKHIFKKYYRG
TNTGEMHKGSGLGMAISKEIIEIHKGKIYVSSEIGIGTKIIIEIKQN
>gi|260686933|ref|YP_003218066.1| hypothetical protein CDR20291_1570 [Clostridium difficile R20291]
MDFFKKGISGFTIKILALIFMTFDHIAAFMPQTMQIPIWFHWVGRISAPLFIFMAVEGFYHTSNRKKYIS
RLYIWSVIMAIGNQIINNVFSHPEGAIIINNIFSTLFLIAIYLQAIEFIKKFRKEKEIKYFIIGLLMIII
PIILGIFTVALLFKVTNRVITLFMILVPVPFLVEGGPIWIILGIIFYLCRGKKFSLSICYVLMCIFIFTT
MSNGDYSLKNSILQNYQWMMIASLPLMLLYNGEKGKSMKYLFYLYYPIHVYILYILGIYLINGF
>gi|260686934|ref|YP_003218067.1| putative NADPH-dependent FMN reductase [Clostridium difficile R20291]
MKVLLINGSPNQYGCTYTALNEITKVLSKHDIKTEILYLGKEAIPGCISCASCFETGKCIRNDKVNELIE
DLDNIDGIIIGSPVYFSSATGQLTSFLDRLFFIAGSRMATKLGASVVSCRRGGASATFDQLNKYFSISNM
PIVSSQYWNQVHGFTPEDVMKDEEGLQTMRTLGENMAWLLKCISAGKKAGIKEPQYEETIMTNFIK
>gi|260686935|ref|YP_003218068.1| putative transcriptional regulator [Clostridium difficile R20291]
MSIDCISNTDLSETGFSYTLSLISGKYKMIILYCLVEFEVVRYNALKRYINTISYKTLSLSLKELEADNL
IIRTEYPQIPPKVEYSLSERGKSLIPILDAMCEWGERNRP
>gi|260686936|ref|YP_003218069.1| pyrrolidone-carboxylate peptidase [Clostridium difficile R20291]
MKILLTGFDPFGGELINPAQEAVERVNNNINGAEIIKITIPTVMTKSVEAIDKAIQEHNPDIVISVGQAG
GRFDITPERVAINIDDFRIKDNEGNQVIDTIIKEDGEPAYFSKLPVKAMVKHMNENKIPASVSNTAGTFV
CNHVMYGILYMIDKKYPNIKGGFIHIPYTTSQVINKKNTPFMSLEEIVKGLELAIEACIIYKEDVKEIGG
EIS
>gi|260686937|ref|YP_003218070.1| hypothetical protein CDR20291_1574 [Clostridium difficile R20291]
MQNFINISLEIFYALMGFLMIVIAYKSFTTINNNKKYGTSLFWILISLPFIFGRLIPANIIGIILILSSL
LTLSKQVVFAKYEEPDENFGKEQADKLKNKIFIPSLILAFAAVVVAMSLSNFDNSSQFAIGVGSIIALIS
ALIITKAKPATSVQDGSRLLQQMGPASMLPQLLVALGALFTQAGVGEVISTMISGVVPADSRLFGVIAYV
LGMVIFTMIMGNAFAAFSVITAGIGIPFVLSQGGNPAIIGALALTAGYCGTLLTPMAANFNIVPAALLEC
KNDYIVIKYQAPVALVLIIAHILVMYFLGF
>gi|260686938|ref|YP_003218071.1| hypothetical protein CDR20291_1575 [Clostridium difficile R20291]
MEGEQFMIKLIGILIVVIGFILKIDTLFTVLLAGVATGIVAGLDFNQIFTILGDSFVSNRGVSLFILTLP
VIGVLERYGLKQRAVSLIEKLKRLTTGKVLTIYMIARQIAGALSIRMSGHPQFVRPLVNPMAQAAGLSNS
DELKESDEEAIKALSAASENYGNFYGQNLFAGSSGVLLIASTLTQFGYNVTGLNIVKASTIMAVIALVVA
TIQFTLYDKKLNKSHKK
>gi|260686939|ref|YP_003218072.1| putative flavodoxin [Clostridium difficile R20291]
MNTIIIYSSKYGCTKDCANILKNKLSDNVTIVDINNNNKIELSKFDKIIIGSSIYVGSVSKKIQVLCNDN
VELLNKKQVGIFLCCGFSEQADKYLKSNFPSSLLESANAIGIFGSEARLEKMKFLDKLIMKAVSKGNYDS
FRISQDNIDNFLINLNS
>gi|260686940|ref|YP_003218073.1| putative FMN-binding exported protein [Clostridium difficile R20291]
MKIRNKATNKKKKYVKISIALFFVFICIIIVIVSNLKPENLVVKDIDINNVKNGIYTGSADNNLVKATVS
VEVNNGKIQNINILKHDHLLGKPAEKITTSIIKQQSLDVDAITSATYSSNTIRKAVENALRKGE
>gi|260686941|ref|YP_003218074.1| TetR-family transcriptional regulator [Clostridium difficile R20291]
MSIKERRKNEKEEMKKKIMDASIEIINQHGYENLSIRKIATKIEYSPTTIYLYYKDKAEIISDMTNKLYN
TVESNAIDIMNNCSSLPIDKQIIEIMTSFIKTLSSEPEMAKAIMHSRMNIIFASENTNNTPSNNGIKMLD
KFLSIGIEQGIFKKNIDKSSWMLISALLGFVLCVVENKLYSLHNFSQLIENFLDILVGGLYNENSQQSY
>gi|260686942|ref|YP_003218075.1| inosine-uridine preferring nucleoside hydrolase [Clostridium difficile R20291]
MEKRKVIIDCDPGIDDSLAILLALNSPELEVIGITTCCGNVPANIGAENALKTLQMCSSLNIPVYIGEEA
PLKRKLVTAQDTHGEDGIGENFYQKVVGAKAKNGAVDFIINTLHNHEKVSIIALAPLTNIAKALIKDKKA
FENLDEFVSMGGAFRIHGNCSPVAEFNYWVDPHGADYVYKNLSKKIHMVGLDVTRKIVLTPNIIEFINRL
DKKMAKYITEITRFYIDFHWEQEGIIGCVINDPLAVAYFIDRSICKGFESYVEVVEDGIAMGQSIVDSFN
FYKKNPNAIVLNEVDEKKFMYMFLKRLFKGYEDIIDSVEGVI
>gi|260686943|ref|YP_003218076.1| hypothetical protein CDR20291_1581 [Clostridium difficile R20291]
MKRKICVKTITLIAFGISINIIGAFIAMGLRLPVYLDSIGTIMIASLLGPKYAVVTGVFGSLISGITFDV
YSLYFAPVQISTGLLAGIAFKKNFLRGLKTPLGVLLFAIPTSIISSIISAFLFGGMTSSGSSYIVQILKV
LGLGDVFSVFVTQVFTDYGDKLLAVVLVNLGLNAVPKTLKVSLTGGK
>gi|260686944|ref|YP_003218077.1| radical SAM-superfamily protein [Clostridium difficile R20291]
MDRYSEITNKNQREIVLLKGFPCIWGKCSFCDYIDDNSNLEEEMNKLNLRVLKNVTGKYGVLEVINSGSC
FELPKDTLEKIKCIIKEKNIKKLFLESHWSYKNRLKEMREYFEIPVVFKIGVETFDNDFRNNILNKNANF
KTPQDVKEYFDSPCIMIGIKGQTKEMIDKDIEIILNTFEKATVNVFINNSSSIKRDEELVKWFVSKYKFL
DENPNIEVLYNNTDFGVGD
>gi|260686945|ref|YP_003218078.1| hypothetical protein CDR20291_1583 [Clostridium difficile R20291]
MMFDRGKWNKLDYNELLEYMMSIKDIKYRDFNKKLIPGTENIIGIRVPNLRKLSKEISQGNWKEFLEVAE
DTYYEEVRLQGMVIGNINSNFEETLYYVKRFIPKIDNWSVCDGFCSGLKSMKKYKENMYDILKKYVYSKN
PWEIRFALVMFLIYYVDDKHIKEIFEYCNNIQSEEYYVKMGMAWLLSICFIKCEEETFLYIKNNNLDDFT
YNKMLQKIIESNRVDLEKKNIIRSMKRKTRRC
>gi|260686946|ref|YP_003218079.1| putative DNA-binding protein [Clostridium difficile R20291]
MNNNEDRIDKFLELQSKGFKFAEIAQNLKISQSTLRTFLNKKGYKSEKGKYILKDELNYNKSLDNRNLEE
EKAKEYEKSKKNTISNRKKVSTKKKISNEKALSKSVEQIEFNDTGLKNAKRKQNVKPKKDRKINITQEDL
DKLCEVYDWYLEVKDYNIKPKKVSNKKDVHIDDEHIDELKTTRIRIDKEIWNDFERLCSNSNFEKHQILT
QALKEFMKKYKNLL
>gi|260686947|ref|YP_003218080.1| putative lipoprotein [Clostridium difficile R20291]
MNKIVKKSISLMIILTIFIFMLTACEKDEQPDSVDIQTEDKNEIKIDEGNAKVLNIGKSEIINIDEGDKV
DTSTKVENNSTFNISNVELIYNEYDENKKIISSDSKALLDMTLMPGKVAYIECGHKTFVKGVEVYAYEYE
AEGKIVYVNLKENTINIRNNNIKLENSSQYEVLSTSELKKVNESNEGITYQVKVKNSSSKDLGNIILKTA
EVNENGEYLTVNRVPSYKILKPSEETDIDILCSTKAKSVEIVGYTYDDIKEKANVDIDLKSHKVKIDK
>gi|260686948|ref|YP_003218081.1| two-component response regulator [Clostridium difficile R20291]
MKVLIVEDNKILLESVVEELSKHFETEKCEDGEEALYLVNQNIYDLVILDLMLPNINGFDILKKMRVNNI
DTPVLILTAKETLDDKVEAFTIGANDYLTKPFYMEELVARVYAILRTNGKIKERNGLEFKSLYLDTLEKR
VYIEKEEIKLQNKQFNLLEYFVLNKGSILLKEQIYDRIWGIDSDATIEIVEVYVSNLRKKLSKYGYDKYI
KTKRKVGYIFDDK
>gi|260686949|ref|YP_003218082.1| two-component sensor histidine kinase [Clostridium difficile R20291]
MINKNVFTSTKNHLIKMYIIVVGSFLIIFSIFIYSYFRGLTYSGIDSEINDELEYIVSQFKRTSFLNPIR
LKDPKDMVYVYEDGRISYYTQNEYFDELLPDRRLDKKNSFFKYTENGYTFRELNVDVGRYQIQIIRNIDS
EMNSLRQLTSVLIIGILISVIITYFVAVYLTRKALIPIETAWKNQAKFIQDASHELRTPITIVSSKLESM
LKSPESTVNDEVETIATAMKETRRLKKMITDLLSLTKEDSIVKVNLEEIDLEKLLEEISEDYIDIAEFQE
KRFVFNSKLKNKVIITDKNKLRQLILIFIDNAFKYTKLGDEIALELKEDIEDEVTLLISDTGIGIKKEEI
PLIFDRFFRSENVRNKDLEGSGIGLSIARMISLNLSIDINVTSDVDIGTTFELSIPKKLK
>gi|260686950|ref|YP_003218083.1| thioredoxin [Clostridium difficile R20291]
MAKVINTSEFRSSVEGSKGVVVVDFFATWCGPCNMLGPVFAELGEEMKDKARFVKVDIDESLEIAQQFNV
STVPTMIIFKDGKPVETLIGFMPKNKIEMQVKSYL
>gi|260686951|ref|YP_003218084.1| thioredoxin reductase [Clostridium difficile R20291]
MRYDIAIIGSGPAGLSAAINAKIRNKTIIMFGNDNLSNKLVKAPSIDNYLGFYDISGDELKDKFKSHIDS
MDISIENKRINNIYAMGEYFTIMSGNDMYEATTVILATGVEYTRPIKGEEEFLGRGVGYCATCDAPLYRN
KKVAVIGYNEESKEEANFLSELTSKTYFIPMYKKDNLMRSSDNLDDSIEVIHDRPVQIDGDKLVNKVSFK
ENHIEVDGVFVIKDSTAPSALVPGIEIDGIHIKVDNNMKTSIDGCFAAGDCVGKPYSYIKAAGQGQIAAL
NAVYYLDKLKRA
>gi|260686952|ref|YP_003218085.1| ArsR-family transcriptional regulator [Clostridium difficile R20291]
MENLVKIFKALSDETRLNILILVSKRNICQKGISKYLGISDSAVSQHIKILKDVGIITGYKEGYYVLYHI
NKESFNICVDFINSMLSNSSESFIDVFDVNTIHLGCSKECKSIKKCCKRREK
>gi|260686953|ref|YP_003218086.1| putative dinitrogenase iron-molybdenum cofactor [Clostridium difficile R20291]
MKVCIPVEENKGLDSKPYGHFGSAPIFVVCDLESGEVKSLDNGDLDHEHGKCQPLKALSGTAVDAVVVGG
IGQGAIIKLNGMGIKVYRAEGDTISANLDLLKNGKLVEFPSDHTCSHDGCGHH
>gi|260686954|ref|YP_003218087.1| hypothetical protein CDR20291_1592 [Clostridium difficile R20291]
MNINTVQGDSIEVLLRQLGATRISKVSSTLYFIKFDLGDGWEISYTYNINAKDQYFLQRIEPYPIGRGLF
NDEYEIVSFISKDLKKFLNAKNSSNFKTFVEVTRKVNSIIDNVEELFLNYNVDGDDLKTLNKELNDILND
IDYIEKHTKKI
>gi|260686955|ref|YP_003218088.1| putative arsenical pump membrane protein [Clostridium difficile R20291]
MEFQQIIAICIFLIVMAAIITEKVNRSVAAVGGALLMIIFNILTLDEGLSHIDFNTIGVLVGMMLFVAVV
KNSGLFEYIAIWTAKKAKGDPWKIMICFAIITAILSAVLDNVTTVLLIGPMTIVITQILGLNPVPFLITQ
ILASNIGGTATLIGDPPNIMIGSAANLSFMDFVINLGPAVIVILAITIICFRFIYGKELVVNERAKNAIL
KLDEKKSVKDKPLLIKSLILIAFILFGFMFHSTIHIDSSVVALTGASIMLLIGKQDVDEIMAGIEWSTIL
FFMGLFVVVGGLVEVGIINKLAQALIGLTEGHLVFTMLLILWLSAIVSSFLDNIPFVATLIPLILTMQAE
GIDVMPLWWATSLGACLGGNGTLIGASANVVLAGIGNKHVHPISFKEYFKIGFPLMIISIIISTVYLIIK
F
>gi|260686956|ref|YP_003218089.1| putative sodium:amino acid symporter [Clostridium difficile R20291]
MNFLNGILTSINNAVVFVNNYLWSYILIIMLVVIGIYFTIKTNFVQFRYFIEMFRLLGDGTANKNAKKEG
KISSFQAFCISTSSRVGTGNIAGIAIAVVAGGPGAVFWMWLIALIGSASSFVESTLAQIYKVKDGQAFRG
GPAYYMEQGLNKKWMGILFSILITICYGFVFNAVQANTVSLAFNNAFGISKMAMGIGLGILTAIVIFGGV
HRVAKVSEIIVPVFAGLYILVALAIVVMNITEIPSVIALIVESAFDFKGMAIGTFMGVVMTGVKRGLFSN
EAGMGSAPNAAATAHVTHPVKQGLIQSLGVFTDTIIICSCTAFMVLLYSGYSSSGATGIELAQEALTHHI
GPVGNIFIAVCIFLFAFSSIVGNYYYGESNMEFMSGSKTKLNVFRVFVVGMVLFGSLTQVDVVWNLADLF
MALMAIINLIAIALLGKYAFIALKDYTSQKKSGIKDPVFIADEIEGLEKVSEWHRELSEEHLG
>gi|260686957|ref|YP_003218090.1| riboflavin synthase beta chain (6,7-dimethyl-8-ribityllumazine synthase) [Clostridium difficile R20291]
MIYEGKLIGKDLKIGIINSRFNEFITSKLLSGAEDCLLRHDVSPENIEIVWVPGAFEIPLVAQKMAKSGR
YDAIICLGCVIRGATSHYDYVCSEVSKGIAKVSLDSELPVIFGIVTTENIEQAIERAGTKAGNKGYDCAM
NALEMANLFKSLN
>gi|260686958|ref|YP_003218091.1| riboflavin biosynthesis protein [Clostridium difficile R20291]
MVRENTDTFQTAFTVTIDGADTLTGISAYERAETVKLFCDENSTSKDFKTPGHIFPLIAKTGGVLVRDGH
TEASVDLARLAGFKEIGLICEIMKDDGTMARVDDLMIFKEKHNLKIITIKDLIEYRKINETTIEKVSSAF
LPTKYGNFEIIGYRDTYSNEEHIALTYGNINIENTLVRLHSECLTGDVFHSLKCDCGLQLESSMKKIVEN
GSGVLIYMKQEGRGIGLLNKIKAYKLQEEGYDTVEANLMLGFEEDMRDFYMAAQILKNLNIKSINLLSNN
PDKINQLEKYGIKIENRIPINEEINDFNKLYLKTKKDKMGHLLDII
>gi|260686959|ref|YP_003218092.1| riboflavin synthase alpha chain [Clostridium difficile R20291]
MFTGIVEEVGILRKITANGKSGKVTILSNKILDGTNLGDSIAVNGVCLTVSNLGKNEFTADVMMETIRST
NLGLLNANDKVNLERAMSLSSRFGGHIVTGHVDGKGTICKFEKDENAVLVSIRPDKKLLSSMILKGSVAI
DGVSLTISYLDDEIFKVSIIPHTKINTILLTKNVGDFVNLESDVIGKYVNNFMANNYKELNSNSSNHKSN
IDKDFLFKNGF
>gi|260686960|ref|YP_003218093.1| riboflavin biosynthesis protein [includes: diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino)uracil reductase] [Clostridium difficile R20291]
MNQKEKDIYYMKKAIELAKNGEGFVNPNPLVGCVIVKDSNIIGKGYHEKFGSNHAEVNAINSAKQSLKDS
TLYVNLEPCSHYGKTPPCVDKIIQNKIKRVVISTLDPNPLVCGNGVKKLKDNNIDVTVGILEDEARDLNE
AFFYHIKNKRPLCIVKSAVSLDGKIATKSLESKWISNESSRYLTHKYRNKYQSIMVGINTVLNDNPLLTC
RLNQEKVSHPTRIVIDTHLKLPLNSNLVKDKTSKTIVFTCCKESIKLSMLKENNVETIISPSKNNLVDLE
FVMYKLGELNIDSVLVEGGATLNDSLFRNKLVDKVKLFLSPKIIGGKDAPTFVSGEGINHLSDSTQLTIN
NVTLIDGDILIESDVLN
>gi|260686961|ref|YP_003218094.1| ATP-dependent DNA helicase [Clostridium difficile R20291]
MNKKLLEILSKYYGYTSFRKGQESIINSILSEKDVLAIMPTGGGKSICYQIPALILDGMTIVISPLISLM
KDQVDALKTMGISAAFINSSLSSKEFNEILNNIRKNNYKILYIAPERLDAQEFIELINNNNVSQVAIDEA
HCVSQWGHDFRLSYRRISDFIKNLPKRPIVTAFTATASEEVRTDIINLLCLENPDYYITGFDRENLSINI
VKSSSKNKYILDYIQNHKNESGIIYVATRKEVENIYNGLSKRNISVSKYHAGLSKNERSKNQEDFINDNV
DIMVATNAFGMGIDKPNIRWVIHYNMPQSIENYYQEIGRAGRDGEKSECVLLFSPGDVHIQKYLIDIGVE
NPERKLFQHKKLQYMIDLVYSNSCYRKTILSYFGENYIDNCNNCSNCLVEGEIVDKTIDAQKVISCVARM
KRSYGVTTIVDVLRGSKNKKILQLGLNTLSTYNIMRDYSSEDLKNFVNTLVSHGFLDLVETLGNGNRGSF
PTIRLNEMSMKVLKGEVKVEFKEIVMTKSLEVEDELYNALRELRHSIASEERIAPYMVFGDGTLRAMSSS
YPINKEEMLDISGVGEIKYQKYGRDFEAVIKEYVEKNNINKKIDEKNVDLKNVNSDFLEVNTDKVLYEKL
LVIREEYATKEKLPAYMILANKALKEISGRYPLDEEQLKDISGIGGVKFEKYGANILAEVNKYVKENNIN
VIWEKKGKRKLILDGESRKNNEIALDLLNQGKDIQSISQEIEVSLSTIIGYVHDYVKDGHSISFELGLEN
FYNEDKKKMILEVCEKVGYDNLNNIKRKLPDSIKYENIRAVMLDSYLENLKNNIIAE
>gi|260686962|ref|YP_003218095.1| thiamine biosynthesis protein [Clostridium difficile R20291]
MLGEICLSVYTIIRVLSKRGKALFLFSKTITLILEDCNMNYTTQMDAARKGIITKEMEIVSQKEQVDVNE
LRELIANGQVVIPANKNHKSLSAEGVGKNLRTKINVNLGISRDCKDIEKELEKVRVAIDMKAEAIMDLSN
YGKTREFREKVVEMSPAMIGSVPMYDAVGYLEKELKDITEEEFLNVIRQHAIDGVDFITIHAGLTRSVCQ
KIKNHERLTHIVSRGGSLLFAWMELNNKENPIYTNFDKILDICEEYDVTLSLGDACRPGCIKDSTDGVQI
QELVVLGELTKRAWERNVQVMIEGPGHMAIDEIEANVVLEKRLCHGAPFYVLGPLVTDIAPGYDHITSAI
GGALACAKGVDFLCYVTPAEHLRLPNLDDMKEGIIAAKIAAHAGDIAKNVKGAREWDNKMSKARADLDWC
EMFRLAIDPEKAKRYRDESTPTHEDSCTMCGKMCSMRTVKKILNNEELNLI
>gi|260686963|ref|YP_003218096.1| putative thiamine biosynthesis protein [Clostridium difficile R20291]
MKVNGKEIEFEKDLTVIDLLNKYNLKSDRVVVEVNLEIIEESNYNTYVLKDEDIVELISFIGGG
>gi|260686964|ref|YP_003218097.1| putative thiamine biosynthesis protein [Clostridium difficile R20291]
MVKIKIFVNELLTDVEENTTAYKVRDSYNNKCDVLVLNGYPIKTDMPLCENDKLTLIQKGVKPSLDELES
LLIARHTPNIHNKLKKGKVAILGLGGLGSNIAISLARIGVGELLLIDYDVVEPSNLNRQQYFIDDIGKLK
TDAMIENIKKINPFIKLNKRDIFLNKNNMDTIKDSDLIIEAFDDASCKAQVCNYVLINLKDKYLIASSGM
AGYYDSNIITTKKIKDRFYICGDFVNEAKFGEGLMAPRVAICANHMANLATQILIDM
>gi|260686965|ref|YP_003218098.1| thiazole biosynthesis protein [Clostridium difficile R20291]
MALRRVDLDNKQENILTYIPKEMTILPNTSGATNAEEAVRIARISRKMGCGDFIKIEVISDTRYLLPDNE
ETIKATKILADEGFIVLPYMTPDLYAGRRLIEANAAAVMPLGAPIGSNRGLQMKEMIRIMIDELDIPIIV
DAGIGKPSQAMEAMEMGADAVLVNTAIASAGDPVQMARAFKLAVEGGREAYIAKTGNVSEFANASSPLTG
FLGNL
>gi|260686966|ref|YP_003218099.1| putative thiamine biosynthesis protein [Clostridium difficile R20291]
MSFYDVIEKYRDFDFDGYLNNVTDNDVLRSLSKDKLEDFDILNLLSKTAVKHLEDMAQKAHKLSVQYFGK
TVCLYTPMYIANYCVNQCVYCSYNIKSGIKRKKLTMDEIREEGEAISKEGFKHLLVLTGESSFHSSVEYI
GEAIEILREKFPSIGIEVYPMEVEEYKYIVDKGVEGLTVYQETYDEEIYKRVHIKGPKSNYEFRLDAPER
GAKAGMRTLSIGALLGLNDFRKETFFTILHGKYLKTKYPHIELSYSTPRMRPFKGCFEELVDISDTDLVQ
AMVCMRLFDPHAAINISTRENLEMRSHIIPLGVTKLSAGVSTDVGGHSQDEHDTAQFKINDESTVKDVEK
MLNSIGYQHVFKDWERF
>gi|260686967|ref|YP_003218100.1| putative thiamine biosynthesis protein [Clostridium difficile R20291]
MYLITNRKLCSEERYLEVIKESILSGVENIIIREKDLEYQELRKLYMKIKTKINCIDFQEQISDESLKTN
INQKECRNKFKVNFIINSNIEFFEKVDCQGIHLPFKLFLNLIENKYNFNENKILGLSLHKVEEVDYLEKL
IRNQNIKIDYITLSHIYETKCKEGLNPKGIELLKEAKKITDIKIIALGGILPSNVKETLKYCDDFAIMST
IMRSKDIKKTISNYNEKLN
>gi|260686968|ref|YP_003218101.1| putative C4-dicarboxylate anaerobic carrier [Clostridium difficile R20291]
MEDIIMTDSKKKRFIIPHTFTIIFLLIVLMAILTWIVPSGEFSREDVEGRMVVVPGTYQSVESNPQGFAD
VFKAPIEGFIDSAEVVGFVLIVGGAFGIVNRTGAIEAGIASVISKFKGKELLIIPISMILFGLGGTTFGM
AEETLPFYMIFVPLMTSLGYDSLTAIAIVFIGAAAGAAASTINPFSVGIAQALAQLAPGSGVTYRVVIFI
AYILISIAFVMYYAKKVKENPESSIVYEIDKNNKSILNQTSTEIKEFTFKEVSVLAIFGIGMAIMIWGVL
SQGWYIPEISMCFAAIGVLSGLVGRLSQIEISESFIDGAKDLASAALAIALARGIVIIAQNGFIIDTILN
SAAAFLGGLPKVIFVYLSFFLEAALAFLIPSSSGLASLTVPVLAPLGDLVNISAQVIVTAYQFGVGLTNF
ITPTSGVLMGALAVAHIPFSKWVRFIMPILLILTAVSLVFLTIGIYIGF
>gi|260686969|ref|YP_003218102.1| hypothetical protein CDR20291_1607 [Clostridium difficile R20291]
MGLKEFDFIEESIDMLRTMSPTLETISDEIEEYFENILDEKNQEYINVTSRIKSESSLREKIIRNRYLKK
YGEASNLIHNVSDLIGLRIECRFIEDENKIYRLLRRYFNKTDDKINYYNKENKNIKLKLSERQPNKQKNG
FEIYKIDGVFAYLDREVKFELQIKSLVNVFWSEIEHKIIYKNNTYLLADKFIKDMMDSIKNNLTMIDNQL
LSIYKNFHSGKSFNMKVSKKEIEKLFAKLVYDAFSEKMNKSIGFVVDFKKPCETILNYSFNKQDISDEVL
GNFMLDEFARLNEIVNKDIDFNEQIEFEREPTFDDKFCKDLGNHFRSRLNTEFPWNLFFRILFEIEPYNN
TKDFENFVEFIKENVLLEENREQLLCQFEEDSKLIIEDIYDCIFNSISEIDSVEILYNYNLEKINFTSSE
IINCICREYECYGEYLEEKEKLMNTFKEKIIQIFE
>gi|260686970|ref|YP_003218103.1| putative molybdopterin-guanine biosynthesis protein [Clostridium difficile R20291]
MRHFSNIYELSKIILEEAICIEKTGVILAGGKNSRMGRDKAFLELHDKLFIEIAIEAFKNFDELIIISNN
EELYSKYDIKVYNDIVKDVGPIGGIYTALEYAKYDIVTIACDMPYLNNQIVERIANKMNDKSVISVTNGK
LQPLCSGYKKSIINKVSLCIRENDLKLRSFIDKIDKSYIYFDEEDLFLNVNTVDEYEKLTKV
>gi|260686971|ref|YP_003218104.1| hypothetical protein CDR20291_1609 [Clostridium difficile R20291]
MNLLKCDSWAVILNNSDKESKAYKILDELKRNMYKVVAIDEEKKPIEGIDVYECLKDVPHNIDVVAIIDK
QSKMDVILEEVELLDIQNMWFEKGSFSEMMIKKTKDLKLNIEYNLSLYDELTR
>gi|260686972|ref|YP_003218105.1| hypothetical protein CDR20291_1610 [Clostridium difficile R20291]
MLIVTTEKVEGKKISKVLGLVRGSTIRAKHVGKDIGASFKNLVGGELTGYNEMLTEARQIAIGRMVEDAE
AKGANAVIAFRLSSASVMQGAAEMLAYGTAVVLEDDNSILEK
>gi|260686973|ref|YP_003218106.1| putative molybdenum cofactor biosynthesis protein [Clostridium difficile R20291]
MFNVAIITLSDKGYEGKREDITGKKLTEFVENTGAYKVTEYVLIKDDKEMLKENIIRLCNSNKIDLILTN
GGTGFSKRDITPEATKEVLEKEIPGLSEYMRMKSTEITKKAILSRGVSGIRNNSIIINLPGSPKGAVENL
SFIIDVLDHGIEVLRGEATECATKKSE
>gi|260686974|ref|YP_003218107.1| molybdenum cofactor biosynthesis protein [Clostridium difficile R20291]
MIDKYGRKIDYLRISLTDKCNLRCVYCMPPDVKFDKNYINENLSFEDYKFIIKAMAEQGITKIRFTGGEP
LLYPKLNELIKFTKEECGINNIGMTTNAIGLSDRIFELEKCGLNKVNISLDSLKEYKYKSVTRGGNLKDV
LKSIESCLNLGIKVKLNCVAISGFNDDELKDFMFLTVKSPIDVRFIELMPLGEANRVYKKGYFNVKEMIE
KIYGLYKVKNDEKSTAEYYMFKGAKGRIGIITPLSCSFCNTCNRIRLTSSGAIKLCLHSKEEIDIKPFLH
KPLLFRESMKDIIKQKPEKHHLIENKCSDTNRRMYEIGG
>gi|260686975|ref|YP_003218108.1| molybdenum cofactor biosynthesis protein [Clostridium difficile R20291]
MLTHINEKGYAKMVDISEKDDTKRTAVATATITLSKEALEKVKNGQIKKGDVLSVAQVAGIMGAKNTSSN
IPMCHQIKLVGCDLEFDVDDYMSAIKIYATCKSLGKTGVEMEALNACSLAALTIYDMCKAVDKKMVISNI
HLVEKTGGKSGDFKFE
>gi|260686976|ref|YP_003218109.1| putative molybdenum cofactor sulfurase [Clostridium difficile R20291]
MAKVVSINISEKKGVIKVPVPCAELKINHGIVGDAHAGNWHRQISLLGKESIDKMKMKGFDQLKYGDFAE
NVTTEGIEVFSLPVGTKLRIGQCEVEVTQIGKKCHNGCEIKKLTGDCVMPREGIFVKVLKEGIINVNDSI
DVI
>gi|260686977|ref|YP_003218110.1| putative permease [Clostridium difficile R20291]
MKMEEEKINYALEQIPENQKRGWVAMFSVLVAIGVDLSSVILGAELAQSMPMKQAILSVIVGSFFSAILY
TTCSLVGSSTSLSTSMITKYVFGEAGAKIFSLVIGVSLLGWFGVQVGFFAQNAQIIIKDIFNLDVSMQIL
SLIGGLLMMSTAIYGYKAMEKLSVYSVPFLLVLMMLTIFLAFRANGISVDDNMKSTMTFAGGVSLSMSII
IVGAIVSPDISRWAKSRRDCALSSFLGIQFGNAFMIIVSIVLVKCMGTSDIMRIFITLGIAIPGIIVLTL
AQWTTNTSNVYSASLSIALVLKKAPEKVLTIVLGIIATLLAVFGIYEGFIGFLNLLGIVIAPVGGVYTAE
YYIVKQELKGFDKGVLYKPIVKRSIVSWIIGILITYLSTYGFITLTTIAPLDGFIAGFVVQSIIGKVLCS
TKNKQEIDKAV
>gi|260686978|ref|YP_003218111.1| hypothetical protein CDR20291_1616 [Clostridium difficile R20291]
MRFLTEESVDKIAVGAAVLGTGGGGDPYVGKLVAKQAIKKYGPVKVISLDELDDDALVVPVSGMGSPVIT
IEKLLSEVELTTPLEIMEKLLNRKVDVIIPIEIGGINSLMPIAVAAKKGLPILDADSMGRAFPEAQMVTF
YLEGYEASPAVMSDEKGNSAILYPVDGIWSERLARTLTVEMGGSSSISDYNLSGAQVKKAAIGNTLTIAE
TIGGFLLENKSDSKGAVENILKELCGYKLFEGKVIDIKRELKGGFTRGHAFFAGINEYDGEYSILFQNEN
LIAKKGDTPLCITPDLIAVLDLETGFPITTERIKYGSRVMVVAFPCNEKWRTEKGIETVGPGYFGYDVEY
KTVEELQGK
>gi|260686979|ref|YP_003218112.1| putative hydantoinase [Clostridium difficile R20291]
MYRVGIDVGGTNTDACILDGELKVIHSVKVATTKDVETGVYNALKKVIDESKIDHSLIKYAMLGTTHCTN
AIVERKRLNNVAMIRIGKPATTAILPFIDWPEDLREKIELDSILVSGGYEFDGRKINELCKDEVVEFCNR
IKGKVESVAISGVFAPVNKQQEEEVAKWVREILGDIPISLSNEIGNIGILERENGAILNSALSQVGKAVS
LGFEKALKDLGIDAQIYFSQNDGTLMNLEYTMKYPIFTIGCGITNSIRGASFLSKVKNAIVLDVGGTTSD
LGVLYNGFPRESSIPVTIGGVHTNFRMPDVLTIGLAGGTCVKGEKDNIKIGPESVGYRITEDAIIFGGDT
LTLSDVVTKLDMAFEDRKSNVENLDKEYCNEVYKKVILKLEDAVDQMKTSQDDVELVLTGGGSIIVPEKL
KGISNVIRPPHYTAANAIGAALGQISGDVEKVYSLDKMSREDAIEDAKKEAVNKALKAGAKEDTIEVLNI
EDVPLAYLPGNALLIKVKVVGDLI
>gi|260686980|ref|YP_003218113.1| hypothetical protein CDR20291_1618 [Clostridium difficile R20291]
MKSYIALLRGINISGKNKIIMSELKASFVELGYSEVSTYLNSGNVVFLSDVDDNKVISNTIRLMIKKQFE
LEIPVFIISQEELKDILNNAPNWWGDNNKEIYDNLIFMFPDLSYDEFYDEVGNPKEEYEKVYHYKNAIFW
SFSRKDYKKTNWWSKTASSNVSDKITIRTANTVRKIVGMR
>gi|260686981|ref|YP_003218114.1| putative transcriptional regulator [Clostridium difficile R20291]
MAKNTKQTTVHIDETLLKEVKRIGINENKSISQIINESIIDYILVYRENEDKEKNEHDKNLNETINEFKK
EEEKRMQAKSAARAIAEAKKRVLY
>gi|260686982|ref|YP_003218115.1| putative acyltransferase [Clostridium difficile R20291]
MNNYLKFATYQLIGFTSSIPSLIKIKKNPDKFSLKEKFEFMQKQAKKSLDIVNIELNIIGKETLPKEPLL
FVVNHSSMLDSFILTASVERPIGCVIADEPVWRNIPIFKEWAKLLRCVYVNRKNNREGIKSIAQASQNIL
TGQSMAVFPEGDLTWIKEPNSLVSEFRSGALKIAYKAKCPIVPLVIKNSKDTYEGYQPIGKINSVPVEVE
FLEPIYDHIENPRLKSSVLGENIKNKMINTIENFRKSNKTFKEF
>gi|260686983|ref|YP_003218116.1| hypothetical protein CDR20291_1621 [Clostridium difficile R20291]
MIESRCGILCYECGYKEKVNCKGCTDIEKPFWGEQCPVKSCCEDKNLIHCGLCDTFPCEMLNQFAYDKEQ
GDDGKRISQCKKWAVLAL
>gi|260686984|ref|YP_003218117.1| AraC-family transcriptional regulator [Clostridium difficile R20291]
MNKIINNILNTCKQYTYILPHKLLRQYIAHYTISIPDTSIKEKLTLIPDASGCMIFKFDKKGIESAFWGA
TTKTTIVKNDIENVLFRVFVEFRPGGVYYLTGLSQRESTDLKISLEDFNTLFSLEVNSIFERTSTIKELV
EQLDMLFLSYLLKSNIVDMTIPILENARKQNSIMSVKNISQISCYSERHLNRIFNNSLGMSVKSYLRLLR
INLVLQEVQNNKRPFATLAQDIGYYDQSHFINDFKSICGVNPTTYIKNLSDFYNEKYKF
>gi|260686985|ref|YP_003218118.1| hypothetical protein CDR20291_1623 [Clostridium difficile R20291]
MASKQTPRNNLEKFLRIRVLSHTGDKIHIKLPVNFAKRMIENNALDLFNGKDDVVDGKKVTEILVKAFDY
DLTGEVVHLERKNGDIIKVSIVQ
>gi|260686986|ref|YP_003218119.1| hypothetical protein CDR20291_1624 [Clostridium difficile R20291]
MRGITMENKDFKLTICIFAFVIGVVVLFCCIGLGEFSAEHIIQQNGGIMDTDQYNIYLDQSISQYRNFGS
ILALLGGIGILFDKYIRKY
>gi|260686987|ref|YP_003218120.1| hypothetical protein CDR20291_1625 [Clostridium difficile R20291]
MATEIFTVKITPLEAQKMIKENIDADLVFSDSYNLGDDKFILITTFEKYYARNNSDAGLIVVYENTTEKT
VIKATSTGSAIGVLKIDWGAGGNLLKRVKNILAEYII
>gi|260686988|ref|YP_003218121.1| putative sodium/phosphate cotransporter [Clostridium difficile R20291]
MNIVISLIGGLGLFLYGMSLMGEGLQKSAGDKLKKIIELLTSNVVMGVLVGTVVTGIIQSSSATTVMVVG
FVNAGIMNLSQAIGVIMGANIGTTVTAQLVSFNLEGIAPIALGIGILFYLFTSNQKTKHLSEILIGFGIL
FTGMEFMKDAVAPLAEYKAFTDALLYFSKNPVLGILAGFAITGIVQSSSASMGMLIALASQGILPLSSAL
PILYGDNIGTCVTSLLSSVGASRNARRAAVMHLSFNVIGTIIFMLVLNKPISAIVTHFDPTDTARQIANA
HTLFNLTNVIILLPFSKYIVKLANRLIPIKETESEIVNNTKYLDERMFSTPSIALGNTVQEVVRMGHKAT
NSLEHSIAGFLNKSNEDINKAFESEKVVNKLQKDILNYLLKLSKEPLRDDERFRTDLLFNTVNDIERVSD
HAENIAELAMSVKEMNISFSDSAIREIYEIYNKTITNFKDALIVLDVKDFELANKVLEVENEVNYLEKTF
RNSHMIRLNNGNCTIDAGVLYLDLLTNLERISDHSTNIVKQVLKLKQKI
>gi|260686989|ref|YP_003218122.1| putative ATP-binding protein [Clostridium difficile R20291]
MADCNSCPSKGNCNSQSNCSIENNPNNKFGKIIGVMSGKGGVGKSTVTALLANKLNKMGYKVGILDSDIT
GPSIPRLMGVKNVKAYSDGSYIYPVENSNNIKVMSINLMIDDENEPVVWRGPLLGGVVKQFYTDVLWEEL
DYLLIDMPPGTGDVALTVMQSIPISGIVMVSVPQDLVSMIVSKAVNMAKKMNINVLGVIENMSYIQCPDC
SKKIKLFEGESTEKFLDDLDLELLGELPMTKEIIDITHNGVTEISDDLDSILTNVVEKIK
>gi|260686990|ref|YP_003218123.1| putative acetyltransferase [Clostridium difficile R20291]
MELRPRSAKLEEFDKVIELINYVFRISRNHKPTMMEEFPLLLSKNNIENMIIISEDDKVVSDVNYLIQDV
SIQGNRLKVAAIGGVCTHPDYEKRGYSSKILDKVEEKMFYDGVDIVIISGTRSLYSRRNCSLVKSFYKYT
IKPEDVKIAYEIVEFDETNFEKDDDLDKMLELYNQNSTRFIRTRDEFQKLLHAATIAWGPIGYKKVFIKE
NNNIIGYLIIRTIKKEDSTVGEVAEIGLNSVNVENILKYVANKFGLEYLNYKVHVKNLKDQLKCNGTESL
DYQQGTMKIINFTKLCDSLRSYFSQYVDFELLKYMEFKQVENKYIIKYKEEELVIENLDKLNKLFFEKNE
EQYNEFKHLKNIYEFATKAFPVDFPWTANLNYQ
>gi|260686991|ref|YP_003218124.1| putative corrinoid protein [Clostridium difficile R20291]
MDILDDIAECILNMGVDNIENLVKIAIDKNIDVEDIYEYGLNKGMIGALDKFENKEYYLSEVIVCTDALN
KGINLLKGTGKVKKKSKGVILMSVVEGDTHEIGKNIVKVMVEATGYKVIDLGVNRKSEDIIEEAIKNNVD
IIGLSSMMTTTMENMKSVIDELNMIEIDKRPKVIIGGGPVSMEFAEEIGADGYSSNAPKAVKLINKLIGG
EV
>gi|260686992|ref|YP_003218125.1| putative methyltransferase [Clostridium difficile R20291]
MFSDMTLLQYINSEDRGFFLPDMGTNGLFLINKKAYEVYDSVDLQLELAKTMDKYFESDFIYSFCDGITF
CETLGLETLRPDYDFPSVLTHTITDRDKLRKLDVPDPYTSGRMPLNIESLSVISKSIKKPLYESIQGPFT
LAGQLAGATQLLRCIITDKKFVEELLEFTTELVRRYAVAANKAGAKYISIAEPTSVTLSKDRFDEYIVKN
LNKIYNELDCWKGMHICGDTRELLDNMLSCNIDAVSLDQILDYEEIAPMIPRDIVLIGNLDPIKLLGRSK
PDKIRRETLKLLKKMRGYDNFLCDFGCNCLNTTPVENLQAAIKAGRINYKELDRIDIDEL
>gi|260686993|ref|YP_003218126.1| hypothetical protein CDR20291_1631 [Clostridium difficile R20291]
MNYNSNKNKYLLKDINLEDIFIDKNIVLKFLGYGNRKAPDTISEIVEREIRNINDILDIKIYISEVDINK
TPKECKKAFAVLYTIGDKIDIKMNDYMENCNMMAGIALDKIGIVCLDYINEKIKMYLKGKYDSLKISHEI
YPGDKDFEVERQKDIYNYVKNKYNSIEIEINDYHQLSPIKSVAMLILMGDEENLESRCSKCPRKCF
>gi|260686994|ref|YP_003218127.1| putative hydrolase [Clostridium difficile R20291]
MKTYKFIFFDADDTLFDFKKSESHAFKKLLSEFDLEFNFENYIESYRNISDKLWLDLEKNIITLNELKLL
RFELFANKISLDVDSETLSKMYLNFLGECTFLIPGAIDILQYLKKKYTIVIITNGISAVQKKRLENSKIK
GYIDGMVVSEELKISKPNPEIFKYALKKFNCHDKSSALMIGNSLTSDVLGGINSGIDTCWLNSNNSINYT
NHIPTYEINTLIELKKLL
>gi|260686995|ref|YP_003218128.1| putative transcriptional regulator [Clostridium difficile R20291]
MNDLNLGEKIAEVRKKQNLSIRDLAKLADVTPSLLSQIERGLANPSVNSLKSIASSLNVPLFTFFVSEVD
KKNLIVRHDNRKKVILPGSKEVIYEILIPDSSGNLEFAIMDLAPNTSSCIDRITHNGDEIAYVLEGEVKL
FMDDDEFTLSKGDSVKVPLGTKHKWQNDSNSESKVIFAVIL
>gi|260686996|ref|YP_003218129.1| putative gluconate permease [Clostridium difficile R20291]
MIGGDIMQITTFGAIFGLLIAIILIIKKFQAVYSLMLGAFIGGLVGGANITQTVDFMANGAMNISPSILR
ALASGVLAGSLIKTGAVDKISEQIVKIFGEKRALFSIAISTMVLAGVGVNLDVSIITVAPIGLYIGRKLN
YSKLSILLAMLGGGKAGNIISPNPNTIAVADNFSVNLSSVMMANIIPAIIGVVITVILASILINKGNKVQ
SYEILEQREDLPSLFKSLCGPIIAIFLLFLGNVSPIVIDPMIALPIGGIVTLIVTGNLNNSREYLAFGLS
KMQGVCILLLGTGTIAGIIQMSELQQSTIGALQFLNMPQFLLAPVSGILMSLATASSTAGATIASSTFHD
AIINGGLSPISGASIVNAGSSVFEQLPHGSLFHTSSGSINMDIGERFKLIPYEALIGIVMTIISTSIQLV
L
>gi|260686997|ref|YP_003218130.1| two-component sensor histidine kinase [Clostridium difficile R20291]
MNKKKIVIIGIIYSFLVVFSLTNMYVNMEYNLNVFEYIKKSLPFTEEEKKWLEKHKNLIYSSDQSSPPLR
YKGKEDGQYKGIIVDLINSLSIQIGRDFYFKPNNWWKESFVNSIDDSIKFFDLIPSKERANKFIFTDPIY
TLSANILKDKKSQDINSYMDLKGKTVAIPEGDYSINFLKQKIQDINILLTPDIKTGVNHLMSGKVDAVVG
DEPVLRYYINNYGLSNKYSVLSNPIYTKKAVLAVPKQYEELVSILNKGIFKLQKNGVYKDLKKKWYSTYN
EVDDILYERGIVPSIYLFIGIILISIYVFYSYTYLLKIEIKRKTEQVIENKKTLEATFNSITDIIMLVDE
NNNIVESNKVLYDFMGEMSYKIADLISMIKGVIKNTFSENTNKTSEIEIYNKILKINTFPVEYKKNNTEY
IVVLIKDITNEKIVEAKLLRENKMISIGQLASGVAHEIRNPLGIIRNNCYLLKDNVTMEEVNDCVKSIES
NVDRASNIITNLLNFARISDDNLEHINIRNFIENIVKLQYKMLQLKNVEIKIDCEHNLVCYINGESLKHV
FINLISNSIDAIHQDGKIIIYCYEKNHCLFIDFKDNGEGIKEDALKDIFNPFYTTKPIGEGTGLGLYITY
NEIKKNNGDISVESKLGVGTCFHIKIPLNKEVTI
>gi|260686998|ref|YP_003218131.1| two-component response regulator [Clostridium difficile R20291]
MKILLVDDELEYGVVMKKILQKKGYLVDIALSGEEAINIIKKDKNYDLVLSDVMMKNMDGVQLLDRIKSI
NRDIEVILVTGYGSIENAVDAMKRGALSYFIKSNPIENLLEEVEKVKASKISVSVQKNNFEFTLESKNRD
FNNIIKIAKKAACKDVNILILGESGVGKDILARYIHSISPRKNEIFVPVNCCSFSENLLESELFGHEKGS
FTGAVDSRKGRFELSNKGTLFLDEIGDIPLNVQVKLLRTLEDKSIERIGSNKSIKVDFRLICAMNKEPKV
EISNGNIREDFFYRISTITITIPPLRKRREDLTTLIEFFLNKYQIEHDKKIHSIDKEVKDFLLNYNYPGN
IRELKNIINRLVVLSEEGNLSKDNLNLISNNVYIDDKISIRPLREIRKEFECEYIEKVLSLCGNNISNTA
KKLEISRRQLTNKISEYNIK
>gi|260686999|ref|YP_003218132.1| sarcosine reductase complex component B alpha subunit [Clostridium difficile R20291]
MKLELGNIFIKNVEFGEKTEVKDGVLYISSEEIEKIVLEDERIVSVNVELARPGESIRIAPVKDVIEPRV
KIGDESKIFPGIINKVKTVGSGRTHVLLGACVVTCGNIVGFQEGVIDMSGPTAKYTPFSKTNNICIVIKA
KDGIDTHDYEEAARIAGLKIGAYVGEAGREVEPDEVIVYETKPLLKQVKEYPDLPTVAYVHMLQSQGLLH
DTYYYGVDAKQIVPTFMYPTEIMDGAIISGNCVAPCDKVTTFHHLNNPVIHDLYKRHGKDLNFIGVILTN
ENVFLVDKERSSDMVAKLIEFLGVDGVLVTEEGYGNPDTDLMMNCRKCSEVGANVVLITDEFPGKDGKSQ
SIADATKEADAVVSCGQGNLVVHFPAMEKIIGTLDYVEMMIGGYKGCLNEDGSMDAELQIIIASTIANGY
NHLTARYY
>gi|260687000|ref|YP_003218133.1| sarcosine reductase complex component b beta subunit [Clostridium difficile R20291]
MSKIRVVHYINNFFAGIGGEEKADIPPEKRAGVVGPGIAFQSQFNDDAEIISTVICGDTYFGENIESATQ
ELLKMIKEESPDLFIAGPAFNAGRYGVACGTICKAVEEELNIPVVTGMYKENPGVDMFKLDLHIVSTGNS
AASLRKVVPIMTKLGLKLVRGEEIGPPEEEGYIMRGIRKNFFHELRGSERAIDMLVKKMKGESFETEYPM
PEFDRVTPMKPVKDLSKIKLALVTSGGIVPIDNPDKIESSSATKYGIYDLTDMDSMSNKEFTTIHGGYDR
AYVLENPNLVVPLDVVRELEKEGVIGELVDYFITTTGTGTSVGNSKRFGEEFSKKLLEDDVDAVILTST
>gi|260687001|ref|YP_003218134.1| putative ferrous iron transport protein A [Clostridium difficile R20291]
MTVYNLKLGQKGIIDNIAGNEKLMKRLLALGLIDGTEVEVKKIAPLNDPIVIRFRGFDLAIRKSDAKNIN
LKNN
>gi|260687002|ref|YP_003218135.1| sodium/glutamate symporter [Clostridium difficile R20291]
MNYKGGLILITLSFDIVQTLTLSIFFFLIGNLLKNKVNFLNNFCIPAPVIGGLLFCFLNLFFKYFNIADI
SISGNLMPNFITFFFTTIGLEISINLIKKGGSVLFRYWILCGVLAFCQNILAITISKIIKLEPLLGLMCG
NVSMEGGHGYSAAFGLTIENLGIEGAVGVGLSAATIGLIMGGILGCPVAKFLINKYKLKPSSNIGLSIPR
YNRNLKRFGSKFFRNKNRIKNNNFSETITPSVFLEQVLLIFICINTGEIISRCFYITFNILLPSVVTCMF
SAVIFRNLNDKINILELNFKLIDFLKELSLGIFLTLSLMNIDLFELSTLLPPILLIVTFQVIFIILFSIF
ICFRVLGKDFDSAIIISGLIGHGIGATPNALANMSSLTQKYGDSPKAFLVVPLVSGFLLDAISIPCILFF
INILT
>gi|260687003|ref|YP_003218136.1| adenosine deaminase [Clostridium difficile R20291]
MFENLPKIDLHCHLDGSVRVETMLDIAIKEKIDLPSNNMDEIKKLAKVSFNCTSLDEYLEKFDLPLKVMQ
SKENLKRITFELLEDASRENVKYIEIRFAPLLHTQKGMSVKNIIEGIIEGIREAESIYDIKGNLILGCMR
TMTSKEALLVIEEGKSFVNKGVVAVDLCGPEKEGFCKEYKDVFKLAREYGYKVTIHAGEAASGENVLDAI
NILKADRIGHGVKIKDHKKAYNLVKDKKILLELCPTSNVQTKTVDSYEVHPFYTFYKDNLHVSINTDNRT
VSDINLSSELNVIFDTFKLGLEDYKIIYRNAVEASFADKETKEYLNSLI
>gi|260687004|ref|YP_003218137.1| hypothetical protein CDR20291_1642 [Clostridium difficile R20291]
MKDYEDVVYIKLVKKELEEWKKNILKKPSIFDKASKGIQNKFNGVLPDKYHEIITSSIKVMTKTVLFGYK
YATKPPLRNMSLEEREKLVLEKAKTYKTTAMIEGAGTGAGGILLGLSDFPLLLGIKVKFLYDVASIYGYD
VKDYRERIYILNILQLAFSSQQHINKTFKLMNNWDEYVNSLPEDINDFDWRTFQQEYRDYLDLAKFLQLM
PGIGAFVGFYVNGKLIDKLCETAVSAYRLRIRELKL
>gi|260687005|ref|YP_003218138.1| putative 2-hydroxyacyl-CoA dehydratase [Clostridium difficile R20291]
MTNLPKQFDSFNEARQKGFINAKELKESGKKMVGVFCTFTPVEIPMAAGATVVGVCGVSEEPIPDAERVL
PRNLCPLIKSSYGHAITDTCPYFYFSDLLIGETTCDGKKKMYEELAKVKPTYVMHLPNTSKGEFAYKLWK
DEMIRLKEEVEKSLGVTITEEDIRTAIKDKNEERELLKEFYALGKLEPSALTGLELHNVLYQAGFKFDRA
ELKHSLRKVIDDMKERYEKGECPVQKDKPRILITGSPIGGISEKIVKTLEDAGASVVAYELCGAIRSNDL
LVDEEIEDVYDALTQKYINIGCSCMMNNDNRIELLDRIIDEYNVDAVIDVVLQACHTFNIESYRIREFVT
KEKNKPFMSLETDYSKSDTEQLRTRFEAFVEML
>gi|260687006|ref|YP_003218139.1| putative (R)-2-hydroxyglutaryl-CoA dehydratase alpha-subunit [Clostridium difficile R20291]
MFSIGVDSGSVATKGVLFDGEKIIKKIIIPTGWSPKNTSKQVYELLSSEIDKKDIKKVVGTGYGRGVMDF
ADKKVTEITCHTRGIYFLNKNIRTILDVGGQDSKVINLDRDGNVFNFIMNDKCAAGTGRFLEITSNLLGS
DIESIDTLAKGYEPVNISSMCTVFAESEIVSLLAQNISTGEVAAGILKSIANKSTSMLARGEVIDEVAFT
GGLAKSKELVKMIEEILGKKIFIAEDTQIIGALGAAVIGFR
>gi|260687007|ref|YP_003218140.1| cell surface protein (putative cell surface-associated cysteine protease) [Clostridium difficile R20291]
MKKFTSKKVARFVALFLISILVMSTIPVSADNSNTLNQIKKAEYSDTYKQYLNDAKNGRTEKYNGIIPNP
YQLEGTQIQSKGRTAPTSYDPRKLGLMTSVKNQEDLGICWDFAAMATLESFLKLNNYGDYDLSEEHLRWW
ASDGEYGWSVNDMDGALNYEAMGYLTSWSGPKLEKDIPYNGRVSKAQGAKKPTNMNTAPTVFNVTDAVCV
SNDINSTKNAILQYGAVTSGYYEDIKYQSDDQNSYYCPTKSFNTNHAISIVGWDDNYSKDNFNANIRPSK
NGAWLIKNSWGDYNSEGGYFWISYEDKTLMSDIDNFSIKGGKKPNDDEKMYQHDYASIVPLISKKITAAN
VFDFNRGDETLKSVMFLTESIGAKYEVSYAPVVNGIPQENNMKKLKEGTAQYSGYITVPIDSFNIPEGKG
AIVVSIEGKNGESTIGSESNVPGYDTFKAKANLGESYIIDNTGKFFDINRDSNFYPCNFTIKAVTEKSSG
ESIPNESLIGSDRYETAIKVSQNGFNSSENVVLVNGSSIVDALAATPFTSAINSPILLTQKEALNSKTKA
EIQRLGAKKVYLIGGENSISKEIEQQLKSLNISIERISGSDRYKTSLLLAQKLNGIKNVSQIAVVNGVKG
LADAISVGAAAAENNIPIILANEKSELQGADEFLNSLNIEKSYIIGGTASLSNNLESKLKNPTRLSGSSR
DETNSKIIDNFYKKDTLKNAFVVKNGIKNQNDLIDGLAVGPLGAKTGSPVILVGDKLADSQKEVLKNKTL
EKVTQVGGGANKNAFKELVKLKSAK
>gi|260687008|ref|YP_003218141.1| TetR-family transcriptional regulator [Clostridium difficile R20291]
MPKSYSDKEREYIIKRLKEEARLCMEQYGIRKTTVDELVKRVKIPKGTFYLFFQSKELLFFEVLRDIHDS
IQKEILYEINRVDESITCEQLTDIFMKFYRMVDSTSILNLMINGEFEILVRKLPDSIIEEHFRHDDFEIG
EIISCIPNAKNKDIESFSGAFRVVFLTMLYKREVGSNCFEDALRLMINGLVIQLME
>gi|260687009|ref|YP_003218142.1| ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MIKVDDLSFSYTDRNFLQNINFEVEKGEILGFLGPSGAGKSTLQKILIGMITNYGGSVIVNGVESKRHSN
KFYENIGVDFEFPSLYEKLTAIENLKYFGSLYSKKLLSIDELLKSVGLENEANKRVSEYSKGMKSRLNFI
KALLHNPDILFLDEPTSGLDPSNSKVMKDIILSEKSKGKTIILTTHNMLDATELCDRVAFIVNGKISALD
TPHNLIMSKGAIKVRYTYFDNGEKTSECFLNNTANDKNLNMLIKKNKLLSIHSSEPTLNDIFIEITGRNL
Q
>gi|260687010|ref|YP_003218143.1| putative ABC transporter, permease protein [Clostridium difficile R20291]
MRLKNLILGDIKFQFKYGFYFLYLFLSIIYICIINVFPTFMREKIAIIMIYSDPAAMGLFFMGAIVLLEK
SQRVLNSLAVSPVKVSEYILSKVISLGVISSIVAMFIAITLNLDNIIISTIGTFFSSIIFSLLGLILASK
ASSLNQFIVLSIPIEIICFIPPILNVLLDTKSYANLYPFNICISLISGDKNFIMINILISIIIIIYFITY
YFICSSWKKVGGVKL
>gi|260687011|ref|YP_003218144.1| putative ABC transporter, permease protein [Clostridium difficile R20291]
MIKIINAFKQEFEQIKRDAMLFIVCVSPILCGVFIKFGIPLIQNISLNKFYYQLNLEPYFLMFDLLLAFI
TPFMFFFASTMVILGEIDDSISRYLIVTPLGKTGYLISRFGIPGTLAFIITMILLIFFSLTKISFLLNLS
ISLLVLLQGVIISILVISLSSNKLEGMVITKFSGVFMMGILAPFFILNKAQYILFFLPTFWISKAFKEDN
YIYMFISIVISLIWILLLFKKFSKKIVK
>gi|260687012|ref|YP_003218145.1| putative transcriptional regulator [Clostridium difficile R20291]
MKNKIKILREKLGLTQEQLGRLVGTSRQAINAIETGKNEPSIWLAYDISRIFNEPIESVFLFEESERKSR
AQISRGEYYGYKKDKNI
>gi|260687013|ref|YP_003218146.1| peptide deformylase 1 [Clostridium difficile R20291]
MAIRKIRTFDDEILRKKSKYVENVDNKIREILNDMAETMYNTPNGGGLAACQVGVLKRLVVIDLGEGLIK
LVNPEIIKQEGEQIVVEGCLSFPEVWGKLKRPKKVTVQALNEYGEKIEIKGSGFMAKCLCHEIDHLNGIV
FTDKIIEHVKL
>gi|260687014|ref|YP_003218147.1| hypothetical protein CDR20291_1652 [Clostridium difficile R20291]
MRLWHKDLIDVLPKNQLVSQWRELLAIKGSIDKKGTPNHLLVNKVLNYSIDEFKFYTKIVHDEMLKRNYK
PNELKYTSILKWKNRNFANDISNEHSLNLENLYDDWHNKMYLKQCLYNLEEKATCGGIPINEWNILLCKY
SKDYELWSGNIMF
>gi|260687015|ref|YP_003218148.1| radical SAM-superfamily protein [Clostridium difficile R20291]
MYNKIKYIPINCEIACNKLKRSMPYKWDLNIYRGCEHGCKYCYAIYSHKYINSNNYFEEIYVKTNIVEKL
ERQLKSSKWKKEVINIGGVTDSYQPIEADYKIMPEILNLLIKYKTPAIISTKSDLILRDYDLIDKLSRIT
YINVASTITTVNEDTQRLIEPNGVDSMRRFKMLKEFRKTNASVGLHIMPIIPYITDDFDNINSLFRHAKE
CNVHYVLPGTLYLRGITRGVFFDFVKKEFPELFDKLSILYSAGSLNREYKNQLYKMVNELRYKYSLSSSY
SKIMKEKLKNSGDGQISFFD
>gi|260687016|ref|YP_003218149.1| hypothetical protein CDR20291_1654 [Clostridium difficile R20291]
MYLERPELYKQSEINFWDDEYISKQLLKAHLDTNFEGASRNFNFIEDSVNWIVTVANPVNYPNLLDLGCG
PGLYAEKFAQKGYKVTGIDFSKRSINYAQNRNKETNLNINYLFQSYLNMNYNDEFDLATLIYCDYGALST
ENRRLLMEKIYDSLKPGGKLILDVFTINKYNNFEEIKYWEINEDGGFWSNEKYMCLQDNCKYNDYNTLEQ
TLVITEKDENVFYVWNHYFSKESFLLEVENIGFKSVEFFSNVKGEAYSDDSMTMGLVLQK
>gi|260687017|ref|YP_003218150.1| putative iron-sulfur protein [Clostridium difficile R20291]
MIGIYFSGTGNSRYCVEKFLQEYDITANSYSIEDNELLQHINNHENIIFSYPVQYSNVPKILKDFIINHS
TLWNGKRVFIIATMALFSGDGSGVLARILKKYGAITVGGLHVKMPDSIGDEKVLKHSLEYNKKLVIKAEK
KVTKAAKKLKHGSPPKEGLGFLSHIVGLFGQRLYFINKTNMYTDKLKINTEECIVCGKCVNLCPMKNLVI
KNCMIVANGQCTMCYRCVNNCAKKAITLLGKKVVEQSNIKKYM
>gi|260687018|ref|YP_003218151.1| hypothetical protein CDR20291_1657 [Clostridium difficile R20291]
MDKISGKLTVLFEEPFWVGIFERQDGKKYEACRVVFGAEPKEVEVYEFILERFFSLDFGSIKLEKNVTKD
NIGYKRMQRKVKKEQEKETIGTKAQNALKLQYEERKQDRKNLAKNRKEEEKERIFNLKQEKRKAKHKGH
>gi|260687019|ref|YP_003218152.1| hypothetical protein CDR20291_1658 [Clostridium difficile R20291]
MKNFILIYFIVINSIAFFSMYIDKKRAIRNEWRIKEATLMSIAVIGGSIGSMIGMYSFRHKTKHIKFTFG
IPFILFLQFLLVYFYILK
>gi|260687020|ref|YP_003218153.1| hypothetical protein CDR20291_1659 [Clostridium difficile R20291]
MKFIVEKEVFDKLENVCFGVVVAKGIDNTKEIERISNLLDISIDRVEDYFKDKKVKESEEIIPYREAFRS
LGMNPNKFMSSIEAMTTRVAKNKKLPHINPIVDLGNSISLKYLLPMGAHDMDFRNDDVYVRFSKKGDKFV
PFGETDVELMEEGELIYSVGDMVKTRRWIWRQGEEGKITNSSKNIFFPIDGFTDANLDKVMSAREELAKL
LKEIFNCEIKVGFVDKDNPEMEI
>gi|260687021|ref|YP_003218154.1| Nudix-family hydrolase [Clostridium difficile R20291]
MIENKFIGLFEIEYKNKLDEDKVWMVASRKSSEQLKNIYLKNEEDSVDAVVIVGLHKSSKKLILIRQFRV
PINGYIYELPAGLVDEGESIDISVERELREETGLTLLEIKKNKSIDKVYLSPGMSDESVAFVYCICDGDI
TDEFLEPDEEIEALLISQEDAKEILQSNHKIDTKAFLILQMFVSLGAKLFE
>gi|260687022|ref|YP_003218155.1| putative lipoprotein [Clostridium difficile R20291]
MKKLVIILISIISVVSLTACKKSNESKYNNLNNKESGQTTIEMDLDKNYDTSDPFVNARLFCVSNDIDVL
DTEISFKMDGDSGIVEIKDNKTDETLWSNTWHGSVDNDTFAISLSNIQKEKEYAICFTGIKINHAVVKVT
FESNLVKEKEKPSK
>gi|260687023|ref|YP_003218156.1| glyceraldehyde-3-phosphate dehydrogenase 1 [Clostridium difficile R20291]
MKIKVGMNGFGRIGRAVLRIAQEELGDNIEIVAINARATTESLAHLFTYDSCYGTFRGEVEAKDEDTLVV
NSKEIKILRYSDPEELPWKELGVDIVIESTGLFTQREKAEKHIKAGAKKVIITAPGKNEDITIVIGVNEK
EYDNQKHNIISNASCTTNCLAPFAKVLDEKFGIVKGLMTTVHSYTNDQRILDKSHKDLRRARAAAESIIP
TTTGAAKAVSRVLPQLEGKLNGFSLRVPTPTVSLVDLVCELKENVTSEQVNSVLKDAAEGELKGVLGYCD
KPLVSIDYKGDSRSSIIDALSTMVIEDNMVKVVSWYDNEWGYSSRTVDLVKYVAEKLK
>gi|260687024|ref|YP_003218157.1| hypothetical protein CDR20291_1663 [Clostridium difficile R20291]
MEKLTDRRQVKAVSMETFIFLILLVVGFGYVGSIMGAGMMFKVIMSTAHALLLETVFLIMAMAVLAGALS
ALLSEFGVIALINKIFAVFMKPLYGLPGASIAGAITTYLSDNPAIIPFAKDKTFTQYFKQYQVPALCNLG
TAFGMGLILTTFMISQGTEYVLPALIGNLGAIIGSVISVRIMLTFTKKFYKYNPEEDKATGTLEKKDEFR
EIREGNVFQRALDAILEGGKMGVDMGMAIIPGVLVVCTLVMLLTFGPSTDPVTGQEVYTGAAYEGIKLLP
VIGDKLGFILEPLFGFTSPEAIAFPITSLGAVGAAMSLVPEFIKSGAITPNDIAVFTAMGMCWSGYLSTH
IGMMDALNARQLAGKAILSHTIGGLCAGAAAHFIFTLVG
>gi|260687025|ref|YP_003218158.1| hypothetical protein CDR20291_1664 [Clostridium difficile R20291]
MDELFHIGIDVGSTTVKVVVLNNSNNIVHKEYRRHYSDVKKSVKEVLNGIYEKLGDINTTIIITGSGGIG
ISKKLGVKFVQEVISSTKSIEYFHPETDVVIELGGEDAKITYLSGGIDQRMNGICAGGTGAFIDQMASLL
KTDASGLNELAKGYNVIYPIASRCGVFAKTDIQPLINDGANQTDIAMSIFNAVVVQTVSVLSCGRKIEGN
VAFLGGPLYFLSELREAFKRVLDLKDENIIFPENAQLYIAIGAGLLSVDEDNIQLKSLIEKLDSIKNIED
GEVNLLEPLFKDKNEYEEFSRRHEKEKISYVDINSIKSNCYLGIDAGSTTTKAALIDEDGRLVYSYYNSN
EGNPLKTTIKVINEVYDILPKNIKILSSTVTGYGEGLIKKALKIDNGEIETIAHYKAAKFFNKDVDFILD
IGGQDMKCLKIKDGVIDNIILNEACSSGCGSFLETFASSLSMTIEEFAHEGIYSQNPVDLGSRCTVFMNS
RVKQAQKEGASVGDISAGLSYSVIKNALFKVIKIRDLNEIGNNIVVQGGTFYNDLVLRSFEKLIGKNVIR
PNISGIMGAFGSALIAKEKYESGYKTSLLSKEELNNIKLEASVTRCKGCSNHCLLTINKFSDNEIFISGN
RCEKGEAIYGDKKIGLEKKKPINLFKYKYNRIFRYKPLEKEEAKNGEIGIPRVLNMYEDYPFWFTFFNAM
GFRVVLSDRSSKQLYETGITSIASETVCYPGKLVHGHIENLIAKGIKNIFYPSVTNENKEDSNADNYYNC
PVVISYSEVIKNNVENIRNKNINYINPFISLNDKEKLKKRLYDELSRHFSDIKITKEEVNHAVDKATDEQ
NLFKMEIQAAGERALKEIKERNMKGIVLCGRPYHIDPEINHGMPELINSLDMAVLTEDSICHLANVQRPL
RVVDQWVYHSRLYKAASFVRDKNYLELVQLNSFGCGLDAVTTDQVQEILNEKSKIYTIIKIDEGNNLGAA
KIRMRSLKAAMFERESKNIDVKNIKVNRIQYAKNNQITNKHTILAPQMSPIHFQFLEKAVNLSGYNIEIL
KDTDSSVIEEGLRYVNNDACYPAIIVVGQLITALKSGKYDLNNTSVTITQTGGGCRATNYIGFLRKAIYD
AGFKDVPVIALSVNGIEDSGIMDNISLKLINRLFMSVVYGDLLMKVLYRVRPYEKVTGSANALYEKWVDI
CKSSLVKAKISVFTRNIKDIVKEFDNLEILDIKKPKVGLVGEILVKFHPIANNNLVDILEREGAEAVVPD
LTNFFLSCAFNTIYKHTHLEGSRKSRMIGEAFIYITGIYQRVYKKALDKSERFYAPANIKNVAKSTEPVV
SLGNQTGEGWLLTGEMVELLNEGVENIICMQPFGCLPNHIIGKGSIKELKRLYKNANIIPIDYDPSASEV
NQLNRIKLMLSKAFKNI
>gi|260687026|ref|YP_003218159.1| methylated-DNA--protein-cysteine methyltransferase 2 [Clostridium difficile R20291]
MSLVYDVYKSKLGNLYILSEDGFIVSVYIGDEKFNNLKNECIKKGIDIKISKEDLKEAISQIDDYFNGKR
KVFNLNIRIEGTEFQKSVYREMLKIPYGETLCYSDIARNINNPKSVRAIGQASKSNKIPIIIPCHRVVGK
KNIGGYMGNHSDLKEILLNLERQS
>gi|260687027|ref|YP_003218160.1| hypothetical protein CDR20291_1666 [Clostridium difficile R20291]
MCDKVIASKYHEKGFNCAESVIKAYNEEFNTDIPVCLGSGLGSGCGVASLCGAVNASNIIIGYVKGRNHE
DESTKAKVYAKDLTTTVRKEYGSELCIDLKKDLVACREIMDFAYDSLKETLKKEL
>gi|260687028|ref|YP_003218161.1| hypothetical protein CDR20291_1667 [Clostridium difficile R20291]
MREMRRLKNLNLLINKLYSKNHNEAYKTFLFLENESLKSNITYCFFDSFLEMIDNENSYIRTRGLLLISA
NAQWDIDNKIEINIDSILSHIVDKKPSVSRMFIKSIPNITKYKENLINRIKMELSNADISIYNNNMKPLV
EKDINDTLSNIS
>gi|260687029|ref|YP_003218162.1| hypothetical protein CDR20291_1668 [Clostridium difficile R20291]
MKEIADAITSEYLSYGINEDISIYEGRFCIYLDKKYRCNGKIYYKMTPPISISFKADIGCVEEIDNEDDN
LVLDYDNAILEVHGYKIISITINTLSEFSVEGYINDDCIKSKNSYVEYVDFNIINLDKIPGKLIKYNDKV
YAGRIEFDINDYVVTIDKRYDYRKELKSELKSKSGAIITHIGRIRRKDGRIFRTNNTINLLDRISTALSF
MCGRYVGFCLAKGYRSGNEVYRIWNENQISPFRYVPTWSDTLSNYHNMEKYISLMCKKLEDFYYGSAIKS
VVDWYIESLGSATMENNIISVQIALETLSYVILVEQSKILTDEAFDCNLASKNIRLLLDTCKIPYGKHEL
NIFDNIIKNKFDDGVDLVIYLRNSIVHPSRKTHRAVLEVEDIWNIISIGTRYIELVLLFILGYRGEYSNR
LVERCYGEVEVVPWN
>gi|260687030|ref|YP_003218163.1| amino acid ABC transporter, substrate-binding protein [Clostridium difficile R20291]
MKNILKKVGIFTIMLGLLGGVVGCSKPDNEKDKDASKESKKEVVVGFDNTFVPMGFLDEKGDTVGFDVDL
AKETFKRLGMEVKFQPIDWSMKETELNDSKTVDVLWNGYSITDERKKIVSYTEPYLQNKQIIVTLSDSKI
NSKADLKDKEVGTQQGSTALDAVEKDKDFMNSLKGGAPVLYDTYDKALRDLEIGRTSAVVGDEVLIRYYM
GQKGEDKYKVLKDDFGLEDYVVATSKENPELCEKINKTLKEMKKDGTFDKIYDKWFK
>gi|260687031|ref|YP_003218164.1| amino acid ABC transporter, permease protein [Clostridium difficile R20291]
MLQGLEIVIAMFCITLIVSIPLGIGVAFLRLSKNKLVSGITQCYILIMRGTPLLLQMIVIFYGLPLLGIV
FDRFTAGVVAFFLNYAAYFAEIFRGGIQSIDRGQYEASKVLGFDKFTMYKRVIFPQVFKRILAPISNEVI
TLVKDTSLVYILGLNDILRISQIAMNREASLLPLFEAGAIYLIFVAILTKGFELLEKKYSYYR
>gi|260687032|ref|YP_003218165.1| amino acid ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MLKIKNLNKSFKKNRVLKDISFELEEGQIGVLLGKSGAGKTTILRCINGLEEFDSGEIIIDNEVIKNKRD
MAKIRGKIGMVFQNFNLFPHMTVLENIIESPVNVFKVPRKEAEERARELLRLVDLEDKLNSYPFELSGGQ
QQRVAIARSCALMPKVLCFDEPTSALDIDTIQRVVNIMNRLKDKGMTILIITHDVVFSNNVADKIISIKD
GIVENVQIKEKIV
>gi|260687033|ref|YP_003218166.1| putative arsenate reductase [Clostridium difficile R20291]
MIKLYGYTKCSTVKKAKNWLKENNLEFEDIDMVQNPPSKEELKSIYKTSGYDIKKFFNTSGMKYRELGLK
DIVKTESDDKLLEILVSDGMLIKRPLLLDGKNVLLGFKEDVWKSTLLKED
>gi|260687034|ref|YP_003218167.1| hypothetical protein CDR20291_1673 [Clostridium difficile R20291]
MSIEDLYDFECVPLNNEIDIDVLFEKMIEDGKEKEYTPIIVIDEKVGLLRKNIDMITKEYGSLENYREYC
LTKYNEIDVNQFFDFRKSEISELLKELIDLEDDFYDYKHFRPIINIDIFHEYNKVYIAKIPTIKPYEVFA
YIPIGGFNDCPRDEEHIAIAKYWYEKHGIFPIAIGCDTVQYSVKNLTKDGKKFDDLCIELVFYCEDIIIQ
GYETLKALKDVLKRSTIVLFWWD
>gi|260687035|ref|YP_003218168.1| hypothetical protein CDR20291_1674 [Clostridium difficile R20291]
MEVNFVKEKEKLDKLKKMLLELGSVVVAYSGGVDSNFLLKVAKDTLGENVIAVTIHAMMHSSREIEEAKQ
YTQNFGVKHIILNIENFDLKEFKENGVDRCYHCKKYIFSKIKEVAKEHNIKYIVDGTNMDDLGDYRPGLK
ALSELGVISPLKDSSLKKEEIRSLSKILGLNTFNKPSFACLASRIPYGVEITDENLRIVEKSEEYLFNLG
FSQFRVRMHGEIARIEVGQEELGKFFENNNFNKVDTKLKIFGFKYVTLDMSGYKMGSMNLNV
>gi|260687036|ref|YP_003218169.1| putative methylase [Clostridium difficile R20291]
MKNYTLISPCFFGMEKMLAREITNLGYEIIKTEDGRITYKTDEFGIAKSNMWLRCAERVHLKIAEFEAKS
FDELFENTKRINWSRYIPYGAQFPISKASSIKSKLYSTPDVQAIVKKAIVESLKKSYLEDGLLKEDKEKY
PIFVFIHKDKVTISIDTTGDALHKRGYREKANKAPIRETLAAGLIYLTPWKAGRVLVDPMCGSGTILIEA
AMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIARENAEIAGVD
EYIEFNVGDATQFKSEDEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSYYLITSYEDFEYEF
GQKADKKRKLYNGMLKTNFFQYPGPKPPRNNK
>gi|260687037|ref|YP_003218170.1| putative lipoprotein [Clostridium difficile R20291]
MKVLKLITVVALMMLFVTGCNIKTESPEQLAKIPDYDDTKKVLYDGIDQLLKPDSSMILPSNTKEVGKIN
KVDLNSDGIDELVVFEQKEDLSNNVSQVGFVTLSYNGEKYVLGDHFLENGESIEYANFYDLDSDGYKEVI
LLVKSKDKTNMHIYKVVDNEITKIYDLDASWLQNKEDFNDMKVKIGYIDGDDKLDILMLHLNNKTNEMFA
SVANFDGKMKIKDSVKFENVKNLSELYTTLGNVASSVGNSSAAIKGIVLDIPILKDNNYITQILYMKDGK
INKAFSDYDKTITKSYYIPVDDIDKDKIIEIPIVAGSTGNNKNTYSSKSSATISWYRWNGKEGADSSLIF
TSQIYYNYKYNFKLFIPNNLFDKILVEQEFVGEKAVFKFYYFDYSDRKNLFNIVVESKNKLEDRKNTGTQ
NSIVLQESDEYTFLLVVNNANEMDKLDMTIDALKEYFSLIYG
>gi|260687038|ref|YP_003218171.1| two-component response regulator [Clostridium difficile R20291]
MVNIILNWRFYFMKEKILILEDEIGIRSFVSINLKREGYEIVEAGTGREAIEKMTTENDITIALLDVMLP
DISGIEVCKFIRENFDQVGIIMLTAKAQEDDKIEGFISGADDYIIKPFSIKELLVRVSALLRRVAKDDSS
VKSSEIVSPPFILDIDKRKLFKNGKEIELTPTEFSIVKYLISNAKQSLSRDQILDEVWGTNYLYDFKIVD
VNIRRIRNKIEDDPSKPKYIQTIWGYGYCFRKEE
>gi|260687039|ref|YP_003218172.1| two-component sensor histidine kinase [Clostridium difficile R20291]
MLHFEGLRKKVIKNYFIIIIIMVTLFEGLFMFYIQNYYYDSVKQLLESEIKYADEYNAITMETTSFEKKV
KNIFDKQPLTKNSEFGISIIDKDKNIILDQYGFKSKEKANYEDVNNALKDIKTKNLTPYTYRIPDTGEHV
MSISLPLKVNNIIEGVVRYTVSLDAIDNAILKQATWLILAGIFILIIAILISLKFAETLIKPLRELKKFA
NELAVGNYNIKLEKMKIVDDEIGDLAQTFEHMAHEIDKSEKLKEEFISSVSHELRTPLTSIKGWSETLGY
ESITREELDLGLGIIQDETERLIKLVEELLDFSRLSSDRIKLHVDIVDVEGLIVGVVNQLKVKAAEKDIS
LLFEFENEFIENIQGDKNRLRQVLINLIQNSFKFTSQGGYIKVVASQDEEITTISVEDNGSGIEKQNLNK
VLDKFFQEDYNKAGSGLGLAISNEIVKLHGGRMKIESEKNVGTKITFNIKNKFAKQA
>gi|260687040|ref|YP_003218173.1| tRNA pseudouridine synthase 2 [Clostridium difficile R20291]
MRNIKMIVAYDGSRYKGYQKLGDNNMTIQEKLENVLSKMTNETVEIIGSGRTDMGAHARGQVVNFRTNCM
DSLDKIQKYLYEYLPEDIVVKTVEEVDERFHSRYNVKSKTYMYKIDNNKYHNPFIRKYATHVSKKLDLDR
MRKASEYLVGEHDFTSFASSKSKKKSNVREIYSINIKEDDNVIEIYVEGNGFLYNMVRIIVGALIDVGLK
RRAPQDIKYMLESKDRCQSSDTAPAKGLCLWKVTY
>gi|260687041|ref|YP_003218174.1| argininosuccinate synthase [Clostridium difficile R20291]
MKEKVVLAYSGGLDTSIIIPWLKENYEDIDVIAVCGNVGQEDKMEDVYEKALQSGASKAYVDDISEEFVT
ETIFKAVKAEAKYEGKYLLGTSLARPIIAKKLVEVAHKEGAKYICHGCTGKGNDQVRFEATIAALDPTIK
VIAPWRIWDIKSREDAIDYAEKHNIKVTATKAKIYSVDANLWHVSTEGGDIEHLENEHKKDVYKQCVDPE
DACDVAEYVEVYFEKGVPKKVNGEELSPVALIHKLNELGCKHGIGVIDIVENRLVGMKSRGIYETPGGTI
LYEAHNILESATLDKDTLHFKQMVSYKYGELIYNGLWYCKLRESIDAFMEQTQDNVTGTVKVKLYKGNIK
PAGIFTENALYDEGISSFGNSELYDHKDAEGFINLFTLPLKIRAMKAGK
>gi|260687042|ref|YP_003218175.1| hypothetical protein CDR20291_1681 [Clostridium difficile R20291]
MKIYSEEIDYMRKIIEIKHHSHDYECMWNGIEDLYINKTGECLPNDFFFLLSGFGSFCYMKTNKADLKRM
VALGDGRTKQMYKFLAPIVGFEYKHHEFKKYEQALKKAKSEIDGGYPVILGALDMYYLPYYKKLYHKEHI
PFHYILMVGYDDERIYLYDCGRTELLHLSYDKLRESMNCNSPGLSKENTICTIRMNTSKNKYNIAREAIA
IKRDMFLNPSKGFLGYKGFEKFIKELPQWNTELDKDDYDKILTNMVMFFGTVPTIPNAIKGIKEPDTVQF
KGGFDKMSRMLNSIGEEYKNDSFIQVADIFDKTAIIIEKISNIIIDYLTQTCDDTEQLPLLFSEVLEHMK
TGYLILDV
>gi|260687043|ref|YP_003218176.1| MerR-family transcriptional regulator [Clostridium difficile R20291]
MRTVKQVSDLTGISVRALHYYDEIGLLKPNKITDAGYRLYDDESIKTLQQILFFKEIDIPLREVKEIMSS
QYFDKVEALKNQKKLLILKRKRLDELIELINQTLRGEGNIDFKEFDMSEYFNVLEEFKREHRNKIIKIYG
SVEKYNEYIERVKSNEEKIAKMAIKQYGTIEKFAQAIKTNFSSDILNLGEKFDRYKNDCLKEKHPKLKEL
YRKLVEDLSKNPSSTDLQEIAKEITDISKKDYEIFSMYTGDDNWYYMIQNYLVNPMWIEEVDKKYGSGAG
KFIGQVLKTYLRDRKPKINTLYEKLVEDLSRDCSSREVQSIVEEIDNEMKRSNEFYKIDNGERYFDYMSE
LYLQDSNYIKVTDKNYGDGASKFIGEAFKIYFDNNNC
>gi|260687044|ref|YP_003218177.1| hypothetical protein CDR20291_1683 [Clostridium difficile R20291]
MKSTTFVILWTILFVLFGFYVNNKLYDFTEGYKDNISVLEKSIENEDWEKAQKEADSISTSWNKEKNHWY
KVLNHEYFDEIGLRFNILDKAIYTENKLKSLEEVESIKTYLGNIIESVKFDVNYIF
>gi|260687045|ref|YP_003218178.1| hypothetical protein CDR20291_1684 [Clostridium difficile R20291]
MIDMTVVLIRSIILYITVLIALRVMGKGEIAEMNCFDLVITLLIAEVASVPMENNNIPIINGVAAISGLV
IMQTLISFLSLKSRKLSSFLSGKPSVLIDKGKIVYKELKKERISIDELLEQLRIQGYFNLKDVQYAILET
DGNLSVVPASSYNSTPPRAFNHLPIPLILDGRIINKNLDIAQKDTNWLMGILKSNHIETFKDVLICVLDE
NDKIFIQNKKGD
>gi|260687046|ref|YP_003218179.1| putative exonuclease [Clostridium difficile R20291]
MCFRFMKYKLFIDFEFNILDDNKNKPKEYNGAELISIGGVLVDNEFNTIDNYYSLVKPKYNKILSNKCKN
LTKLNQLDINNAPNLLYVMDDFYKWFCKFDDVTIYNWGDFDITGLLTSFRVYKYTGKCLELFNMMIDIQP
FISQHITYNNRILSKQISLLNMKKIFSVEGDIKHNSLSDAVDLMNVCKCFFFNSPKNIDILEELYNKLPA
LKTPLYYIPYFEDENFELKFDRTPEDIIIYLKQILTILNISKKEIYFKKRSVLVNNSKIINFKNLSSSFK
LIKLNEFEEYPDFILKLGDKKSFVESVIKINKSNRKSIKNLILKLSKKP
>gi|260687047|ref|YP_003218180.1| hypothetical protein CDR20291_1686 [Clostridium difficile R20291]
MLNLKEIREEIIKKYIGDSLISELTEELKNILITDLQSNPFKSNIELSIIPANIEIFKKIENILIDSKVN
LKMGWERILINYILKDLFELNYEINKSCNEPLMFRVIISIDSYDA
>gi|260687048|ref|YP_003218181.1| putative L-threonine dehydrogenase [Clostridium difficile R20291]
MKKILITGALGQIGSELTIKLRNEYGEQNVIASSRRVKEGNPVCESGIFEILDVTDKNRFFEIAKKYDVD
TIIHLASLLSAVAESKPLEAWNLNMNGLINGLEIAKELDCKFFTPSSIAAFGENSPKNMTPQDTLQRPNT
IYGVTKVSGELLCDYYHSKFGVDTRGVRFPGLISYVTPPGGGTTDYAVDIYYEALKNKRYKSYIAEGTKM
DMMYMPDALQSIVDLIQAPADKLIHRNAFNITAMSFSPEEIADSIKKYIPDFVIEYDVDPVRQSIADSWP
NSLDSSSAVKEWNFKFSYDLDKMTKDMLEKLSEKGIGK
>gi|260687049|ref|YP_003218182.1| hypothetical protein CDR20291_1688 [Clostridium difficile R20291]
MTRPSIYHSQGYTCAEALIKSYNEEHNTDIPISIGSGMGVGMNVGSVCGAVNAAVVIIGYLNGRNSNLDE
NIARKYSRELLNKVRNKYSSEICVSLKKNKVTCEEIINFTYDALNDMLKNQK
>gi|260687050|ref|YP_003218183.1| hypothetical protein CDR20291_1689 [Clostridium difficile R20291]
MFIDEELEGYILTCKISEDFKNIPEYSDEEFYVTVYKDESSDSGYYALLENKEERVVWDGEVVANNIFNN
LWIVVNKVKTG
>gi|260687051|ref|YP_003218184.1| hypothetical protein CDR20291_1690 [Clostridium difficile R20291]
MEYSYSKMNLKKGDIVEVNLEKQANVILLDHINYVKFKNQRNYDYYGGFAKKNPCRMRVPNTGTWYLVVN
QDGNSGIVNFSINTIQN
>gi|260687052|ref|YP_003218185.1| putative nitrite and sulfite reductase subunit [Clostridium difficile R20291]
MSNVTAEQKKEVKGRGFLPSRDGEHFAARIITVNGVINASQAKKIAEAAEKFGNGQLAFTTRLTVELPGV
KFEDIEALSEFIASENLITGGTGSRVRPVVACKGTVCVHGLADTQALATEIHEEFYKNWYDVKLPHKFKI
GVGGCPNNCIKPDLNDLGIVGQRVPDYDSELCVGCKKCAVVEVCPVKAAKLTDKGKLEIDSNLCNNCGKC
IESCNFDSIEEKESGYKVYIGGKWGKSVRPGTQIDRLFSKEELMTLIEKAILLFREQGNTGERFGITIDR
IGADKFIEMLLSDEVLERKEEILEALLHLTGGAVC
>gi|260687053|ref|YP_003218186.1| putative pyridine nucleotide-disulfide oxidoreductase [Clostridium difficile R20291]
MKVLIIGGVAAGTKTAAKIKREMGDNCSVTILNKGDDISYAGCGLPYYVGKIIEDKSSLIVNTPESFSKL
TGAEVRCGVEVTSIDRNAKQVTLKTLSTGEKENLSYDKLVIATGADPIKPPIPGIDLPGVFFMRTPNDAI
KLRDSIENGIKRAVVIGGGFIGLEIAENLSAMGIRVSVVDMAEHVMPGFDTDFAEYVENHMADKGIMIFT
GDQVVGIEGENKVEKLRTKNRAIKTDLVVMSVGIRPNTGFLKDTGLEFAPNNTIIADEYMLTNDKDIYVV
GDCAFVKNSLTNKPTWSPMGSSANHEGRICAQNISGKSKTYNGVLGTTVVKLPELNAGKTGLSKEIAEKE
GYNVCSVTIATDDKAHYYPGASNFIIRMVAEKNTRKLLGVQVMGPGAVDKIVDIAATAITLGADLYSLES
MDLAYAPPFSTAIHPFVVAVNVLQNKLNGELDSVLLDEIEDFDSWTKLDVSKAPSIPSLRYIPVGEINGE
IEGLAKDEKILLICAKGKNSYMAQNRLRRFGYTNTKVLEGGILFYPNLKVMEE
>gi|260687054|ref|YP_003218187.1| LysR-family transcriptional regulator [Clostridium difficile R20291]
MTIRSLEIFVKVAECGKMSEVARNMYITQSSVSQAISEIEKEYGVKLFDRISKKLYLTEAGKKLLGYGRH
LLAVNEEMNDCMKHCAKNIRIRVGATVTVGTCVISPIMLELYKVNPLIEPEVFVEDTRLIAKKLLNSELD
IAIVEGKIKHPDIVTKSIINDNLVLICSHKHEFYKRDSIKVSELSNQPLIMRELGSGTRAQLEKQLKELK
IPMNIRWSCYNSEAILRAVVDNFGIAVISELLIEDYLKKHLLWACDIEGINLHRTFDIAYHRSKFFTENI
SAFFDISVEYGKKQARKKSRSVNSL
>gi|260687055|ref|YP_003218188.1| tellurium resistance protein [Clostridium difficile R20291]
MGITLAKGQKVSLTKSNPGLKKVIVGLGWDINKYDGGFDFDLDASAFLTGTDGKVTNDGDFIFYNNLKHA
SGAVEYMGDNRTGVGDGDDEQINVDLSKIPQNIAKISFSVTINEAITRRQNFGQVENSYIRIYNEETNEE
LIKYELGEDFSIETAIVVAELYRHNGEWKFNALGSGFEDGLAGLCKNFGVNIG
>gi|260687056|ref|YP_003218189.1| tellurium resistance protein [Clostridium difficile R20291]
MSVSLQKGQRVSLVKDNNPVKNLVVGLGWDMNKLGKKNYDLDAFAIALTNQDKMNVRGDLVYFGNLKHPS
KAIIHTGDNLTGKGEGDDEQIIVNLEDIPEYVHKIVFGVSIYKAKKRDQDFGQMNNSFIRLIDSNSKQEL
FKYNLQEDFSGKVTVLAGEIYRRNEEWKFNALGIGQNEELRELINTYK
>gi|260687057|ref|YP_003218190.1| hypothetical protein CDR20291_1696 [Clostridium difficile R20291]
MLLKKDRITFSEILILIVGCILMAISLNLFFNPHAIAAGGITGLGVVLNSLFGVELWIVNLLLNVPLFIF
AYKILSKKDCFKTVLGIIFLTIALKLTANMATLDITNDMYLAIISGSILMGVGQGLIFRINGSTGGTDLM
ALLLNKYFPTFSIPVLMGIVDCVVVVLSGIVNRQVEIALYSTVALYILVKVSDLLIEGFNYSKSFTIISD
LSKDISKKIMEDLDRGATILKGEGAYTGENKNVLLVVVEKKEVVELKKLVKNVDPNAFIIITDIHEALGN
GFKKIE
>gi|260687058|ref|YP_003218191.1| putative hydrolase [Clostridium difficile R20291]
MAKLTLEHIKGNTYYIPLPTIVGVYVDGKDAILIDSGNNKDTARQVLRLLEEHNLSPKLIINTHSNADHI
GGNAYLKNQTKCKIATTKIEGYFTENPILESAFLYGGYPSKALKNKFLLAKESEVDYIIPSNGKIVDTEL
EAISLPGHYFEMIGVRTPDNVLFVADSLTPENIITKYHFFFLLDIDSQFKTLEKLRMLEADFFVPSHSVK
TTDIKSLININKKKMEEIIDNIKKVCYEPVMIDEVIEKMCDLYNVKLDANQYVLVGSTIRSYITYLYENN
MVEYIFDGGKMMIKAV
>gi|260687059|ref|YP_003218192.1| cell surface protein [Clostridium difficile R20291]
MNKKFKKFSKKLSILILVLTMFLFNNLTANAQIKEDSIIGIDRYETAGLIADRQTYDTVILVNGDKNLSD
GLSSSGLAGAINAPILLTKKSEIPKATLNRLDNKSLNVVKKVYIIGGYNTIENSVEKDIKRKGIQVERIN
GNNRIETSYNVAKKINEVSSVKEVMLTNGFVGEADAMSIAPVVAKNKGAIILTDGKSVPFKTEGLNVYAI
GGKSAINEDLVNETKATRIGGNDRFETNKKVMEKFYNGATDFYITNGYQLVDALTLSPLAKEKPIVLVAD
GSNKGILKGAKSITKVGGIDANIYKQCLDMIKYNNMDVTPNILKHLTSVEGNEVSEILIESDNLGVVVEK
TNTNKFEFDYVSVTNEKNCTFSVYKENSSNNVKNGKLVVSAKKKIDKKDSDLQDMNGDNMINANKDRMVN
VIKIGVPDKMYSNFKVDVESGSVELYNIKGGATVDVNDGIANIVDNNVTNPFNINTNSGISGVTAETISS
EIKFRANNGIVSVTATNINGNISLFGSDNKGTFDGIFKLNLKKEPSNLHLKLVGNGINKLPEGWSKDYIL
GNGQPIIEVKNNGINNISIGE
>gi|260687060|ref|YP_003218193.1| putative sucrose operon repressor (LacI-family transcriptional regulator) [Clostridium difficile R20291]
MKKITINDIANLAGVSKSTVSRYLNNKDISDSTKEKIKTIIDEYGYEPNAFAQSLRAKKTYFIGIITPCL
DSFVKSKIMMAIDEELKELKYTSLIINTNRKIRSEIDSISKLASLKVDGIILIGTEITKEHKNEIEKLDI
PMVVVGQKVDGINSIVNDDYGAGYKMGQYIANKGYKNIVYLGVDESDISVGLNRKNGVLNGLKDKGYDAK
VFYTDFDQETSIQRSGEMLESENPDIIICATDNIAIATMKEINKRGKNIPQDISVAGFGGYDVLSIISPK
LTTIKFENKNAGKVAANTIVNLIQERKEPLLKEIKFELIEGESTINKN
>gi|260687061|ref|YP_003218194.1| putative sucrose-6-phosphate hydrolase [Clostridium difficile R20291]
MYKEPKYRTILESIKEELNKLRNISLNDKYKPLFHIHPQHGLLNDPNGLAYYNGKYHVFYQWYPYDATHG
MKHWAYVSSDDFVNWNREDVALIPIESYESHGAYSGNAIEVDGKLHMYYTGNIKYSAEDRYAYQNLAIMN
KDGKITKYENNPIVSEIPKGYTGHVRDPKVFKRKDKYFMLLGAQTSDKKGVIIVYESKNSIDWNFKGELN
VKNIDEDFGYMWECPDYINIDEKDILIFSPQGVEPKGFDYQNIYNVVYAIGNMDLDNLTFEIDTMKELEK
GFDFYAPQTFIKDSQIILFAWAGMGEVLYPTDKNKWAHCLTVPRKLNIKNNKLLQMPVDELIKLRYDETS
GQNTIKNNINIIENDENVYELNINIKNIDSNKFGLELFSSQDEGVKLEFNKLGNIVTLDRSNFKKVFGVE
YGTNRKEYINIDENTNIKVLADRSVLEIFINDGEVVFTSRIFAKENSNQIRVYSDKIVEYEYTKFKLKQG
IEL
>gi|260687062|ref|YP_003218195.1| putative fructokinase [Clostridium difficile R20291]
MKKVISIGEALIDFIPNQNGCKLKNVSEFRRVAGGAPANVSVVVAKLGGKSSFISKLGKDAFGDYIIDVL
NEVNVNTDYVLRTSKANTGLAFVSLKEDGNRDFSFYRNPSADMLLEADEVKKEWFNNCHILHFCSVDLID
SPMKLAHKKAIEYALESNSIISFDPNIRLPLWDSEQSCKKAISEFLPFAHIVKISDEELEFMTGENDIEK
SLHKLFVGNVELVLYTKGKDGVDAYTKKVKGMCKGVKVNAIDTTGAGDSYIGSFLYTLLYKQITLNDIKE
MKQETLNEYLEFSNYYAARSTTIKGAISSYATKEEITEFIKNL
>gi|260687063|ref|YP_003218196.1| putative NADPH-dependent FMN reductase [Clostridium difficile R20291]
MEICILMGSPKKKGNTAAILKPFIEELENYNSNIEVIWLYDCKIEPCIACKKCQDNLFDFGCYCKDDVQK
IFKKILMCDLIVFATPIYSWYCTSPMKALLDRLVYGMNKYYGNEKGPALWAGKPVALITTCGYRPEKGAD
IWENGMKRYCKHSQLKYIGMLVERDLGKPNFMNKEKEKHSRQFAKQIYYILDNSIEVDNC
>gi|260687064|ref|YP_003218197.1| putative pyridoxal-dependent decarboxylase [Clostridium difficile R20291]
MIIFKILEVKNMYSNEDYKFIEENAPCYIYDETNIIEKCKELKNNILGFDFLYSIKTNPYNKIVKSIAEQ
GFGADASSTNEVMISSECGVSKYDIYYSSPGKTEIDIETVLDKCIIIADSITEIELINKISKKHNQKVKI
GIRINPDFTMDDDSAKSSKFGIDIEDMSSVFKMLSMCDYVSVVGIHIHIKSQVLDFEKLGHYYEKCFFIA
LNLNKSKYINIEFINFGSGLGVAYDNLRENPLNLKELSKLTQKIVFTNSNTLKSRLLIESGRFIVCKSGN
YYVKIVDIKVSRGKKYLIVKNGLNGFMRPIISNLIENITCGVELEGQEPLYTSNHAFSLSVLNNLKEEEY
VNVVGNLCTSLDVIANNVKLKKANIGDLISISNAGSYSYSLSPLLFSSYEFPKQYYKRKDGYIE
>gi|260687065|ref|YP_003218198.1| g196 [Clostridium difficile R20291]
MLLRASIGMGIVIFTMAFVQNVYQLLGLRILQGVFTGYATACTTLIATQTDKNHSGWALGTLATASTTGS
LIGPTVGGYIESILGLKSTFIITGGLLFVSFIISILFVVDNFKPKEIKESISIPKEQLNILPNKFLIASI
FVTTFITQLALYSIEPIVTIYISQLTNFASNVALIAGLTFSASGLANLLAAQKLGKMSDKIGPQKVLLIS
LLWAGIIFIPQAFVKTAWQLMLLRFLLGLSVAGLNPSVNSLLKKIAPEEYVGKIFGYNASAQYIGCSSGA
FLGGQISAHLGIRTVFFSTSLLLFMNALWMYKFTGLFIKDKTK
>gi|260687066|ref|YP_003218199.1| putative regulatory protein [Clostridium difficile R20291]
MTISKIPQAELKVMKFIWEKNDTVTSKETIEAMERKYGWKQTTTLTLLSRLVKKHFLSAEKIDRYTHYTI
VVGHKEYLSVETKDFLSNIHDNSLQSLISALHDDEVVDKDMLDLFESHFKNLEEE
>gi|260687067|ref|YP_003218200.1| putative two-component sensor histidine kinase () [Clostridium difficile R20291]
MLDAFITIVSSIIEIWSCKKVFDYTSQSKTDLKKLNMYFLFSVFLIISSLYINIGANSRILICIFVMFVF
YKSNYKVNIYKCLVISFFYWLILIGINGLSMLLVATVSNLDNMNVLLSGSLYRYEAIFLGKIMLGILLYV
YKASFKNFKISKKEIYICIPMIANLLSFFVLYDYIINLVKISPERRTAFLVIVLLLILSNISIFVLIHII
LKIKIRKIR
>gi|260687068|ref|YP_003218201.1| putative two-component system response regulator () [Clostridium difficile R20291]
MILIKNTKIKLIKVLGGMEMKEENFINVEYEDKRFSINSKEVLYIEKQEYEVKIYTESGNYEVGENAPCI
RKLLKEENFFKCSNSYIVNLDKCEFYLSNNCIFVNNNFIRILGSERKKKLKKKLEKLYDYED
>gi|260687069|ref|YP_003218202.1| hypothetical protein CDR20291_1708 [Clostridium difficile R20291]
MIKYKTSNLFQNKILFKRKGRDMGDYNKMIELKNNLGISERKLKYPCIYKHFKGKYYATMGLSKAIDDIE
NICEIYGKENLIQNRNKYKLVIRHTEREEDIYVYRDLDGNLYHKKEEDTNDLVLYKTLYDDTGIFARPLD
MFLEKVDTDKYVNSIQEYRFEEVYK
>gi|260687070|ref|YP_003218203.1| putative phosphoglycerate mutase [Clostridium difficile R20291]
MGNTFYIVRHGQTDWNILGKTQGHGNSDLTPQGIEQAKELSEDIGKYSIDYIFSSDLGRAMQTAQILGDK
LNIEVQKTEALREMGFGVWEGLLIKEIQKDYSDIYATWRNEPHLVNIPEGETLKIIKERVDAFIKELNEK
YDNKNIILVTHSITLRVMLLSFLESGMENIYRIKQDNTALNIVEFKDYGPVIVKMNDTSHIKNHVKINNS
ALE
>gi|260687071|ref|YP_003218204.1| hypothetical protein CDR20291_1710 [Clostridium difficile R20291]
MSKVIVVGGGASGMMAALSASKNNNEVILVERNGELGRKLRATGGGRCNFTNNREIEDFFDKVVSNKKFL
YSSFYTFTNKDLISYFESRNLEYKIEKENDHKVYTKNDKSIEVIEVLNKDLLNHNVKIMYNKKVIDIITE
EIALKDDSNKDKSKYLIKGIILDNGDKILGDKVIISTGGVSYSKTGSDGSMYKILKKHGHTLNKLYPALV
PLTIEEKWIKDLQGISMKNVEISCKIKKRKISKSGDMLFAHFGITGPCVLIMSSYINKIIEKEKVELNID
FLPNLSTDEISSIIRAFPNKNVLNNLKQILPQNFLREIFSLLSLVDKKASDLSKADEIRIIEYIKNMKLT
CNGTTGINTGMVTSGGISVKEINSSTMESKLVKNLFFTGEVIDIDAETGGYNLQIAFSTGYLAGISV
>gi|260687072|ref|YP_003218205.1| cytidylate kinase [Clostridium difficile R20291]
MGNLVIAVDGPAGAGKSTIAKIVAKKLNINYIDTGAMYRAVTYKCLKSGVDVNNEKEVIQIAENSDIDFK
DNNIYLDKEVINEEIRTIEVSNNVSNVAKIKEVRQLMVEVQRKIGMKSSVILDGRDIGSYVFPDADYKFF
LVATPEERGNRRYKELCNKGYNTTLEEVIEDIIRRDEIDSNREFAPLVKANDALEIDTTGKTIEEVVEEV
VSKINL
>gi|260687073|ref|YP_003218206.1| putative acyltransferase [Clostridium difficile R20291]
MNFYRFVINIFKGFSKIFFKYEVIGAENIPDRGNIVIASNHKSNLDPIFLAAAIENREIAAIAKKELFKV
KPLGFILKKLHVMPINREKPDVSTIKTILRSVRDGYVLGIFPEGTRIKGDSFGKAKAGLSVFTIKSKSKV
VPVSIISKYKLFSKVIVYIGEPISFEEHFKEKLSNDDHERISQEILEVIKQNYFKYSK
>gi|260687074|ref|YP_003218207.1| putative 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Clostridium difficile R20291]
MNIKIAKNAGFCFGVKRAMKMAWDEVEKNDSGIYALGPLIHNKQAVAKYEEKGLKTVNEIDTIPNHENMI
IRSHGVPENIYKEAKDKKLKIVDTTCPFVKKIHTVVSEYHNKGYEIIVIGDMKHPEVIGINGWCENSAII
IKTLEQMENMEFNNSKKYCLVAQTTINPELYISIVNKLSDKLEEIVFNDTICSATKTRQESAKELAKEVD
CMIVIGGKHSSNTQKLVKVCEDLVPTFAIETKDELDVNTLKKYKNLGITAGASTPNWIIEEVVTFLENL
>gi|260687075|ref|YP_003218208.1| hypothetical protein CDR20291_1714 [Clostridium difficile R20291]
MLFGYINYKTSGNFTNIISKNRKFQPLIGALIGAIPGCGGSLAIMPLYINGKLSFGAIIASLIASMGDAA
FVLISSNIKMYFFVTIVSTITGIITGQLVDYFKLEEKLGLKNRRKSDKYDISKNNPKENKEQHNHDEIIL
DTLAKSHGNTNRLAFIITHGKGYKFYIGIIVIGFIFMSLAHSGLNLPIIEKLHSLEEVIAVIGILFSIIY
MWCFKKVFKNSNQKEEENKKISLREMLIHSVGEISFVITWIFIAYLIYDLIILILGGDEYLVKLVLSTGV
ISVFIGAGLGLIPGCGIQIVLMSFYLKGTIPLGAVIANSISQDGDALFPLLAMDKKSSLWAMIITTIPAI
LVGMIVYAFLG
>gi|260687076|ref|YP_003218209.1| adenine deaminase [Clostridium difficile R20291]
MGNLKRQCDVSSGREKADIVLKNGTIINVFTEELITGDVAIVGDTIVGIGDYKGNVEIDCSNKYISPGFI
DAHMHIESTMVMPIELSKKLLKSGTTTIIADPHELVNVKGASAIDFLLESTKDIPLNVYIMVPSSVPATS
FETNGVGKFSAKDMESYVNNPRILGLGEVMCFNDVINSENEILDKLELFKNKVVDGHAPNINGKSLQTYV
CAGIENDHECITFDEVYEKLRAGLKILIREGSAAKNLKSIVSGMLKHNLPIEEFMFCTDDKHLDDIEKQG
HIRWNIKCAIDLGMEPVRAIKVATYNSAKAYGLRKIGAIGAGYKADIVVLNDLDKMEVDSVYKDGNLVNE
EMFSNYNYEIKDKELLNTVKFKYINKEKIQLKVSEKNYVMEIVPYQILTNKVYESLPCADGYFVPNKEYS
KLCVVERHRMTGNVAIASLKGFGIKNGAIATTVAHDSHNIIVAGDNDDDILVAINYLKEIQGGYVIVSNG
KVLAHLSLQVAGLISTFTAEEVQEITDNMLEIARKMGVPEYVDPFITLSFMALPVVPQIRLTDLGLFDVE
EFKFI
>gi|260687077|ref|YP_003218210.1| putative thiol peroxidase (bacterioferritin comigratory protein) [Clostridium difficile R20291]
MLSIGTKAPEFTLEDKDGNKVSMSDFKGKKVVVYFYPKDNTPGCTRQACAFRNAYDGFKKEDIQVIGISK
DSIKSHQKFAEKHELPFILLSDPDLVAIKAFDVWKEKKMYGKTALGVVRATYIIDENGIIEKVFEKAKPD
TNAQEILEYLEKQE
>gi|260687078|ref|YP_003218211.1| hypothetical protein CDR20291_1717 [Clostridium difficile R20291]
MIIMLSPAKNMKNIEVFDRDLSLPCFIDNTKEIVENIKTFGIEDFKNKMKINEKLAVLNKNRFESIKFDR
LGNPAILTYDGIQYKNIEAENFTRKDEEFANSCIRIISGLYGVVKPYDSIYEYRLEMQTKLRVGEFKNLY
EYWGNRIYKELIKEKTAIINLSSNEYSKSIEKFIKDSDTYITCTFKVNKNGILKVESTQAKKARGMMTKY
IVKNRIRDIEELKKFNLEGYKYKENLSNNSEYIFVKE
>gi|260687079|ref|YP_003218212.1| putative cations-transporting ATPase [Clostridium difficile R20291]
MENHKQMPWHSRATHEILESLDSSEEGLTDTEAEKRLKENGLNELRKKPPRTTLQMLWSQITDAMVMILI
GAAILSLIFGEFTEAFVILIIVTVNAVIGIVQEKKAESSLEALKNMNSPTARVMRDGEENVIPASNLVVG
DIVFLEDGAMVPADLRLIETSSLKIQEASLTGESVPSEKDADTILPKECVLGDRSNMAYTSSIVTYGRGV
GVVVATGMDTEVGNIAHLLDSQDDFDTPIKRKLNTVGKTLSVIGIIVCVVIFAIGAFYQRPLLPMFMIAI
SLAISIIPEGLPATATIVMALGVQRMAKRNALIRKLPAVETLGGATVICCDKTGTLTLNKMTVTHIAVNG
DFESGKVTSIDTASEKHPLVYKEIVYAGALCNDACINPDKTDEILGDPTEGALIFMAKKFGIDQEALEEE
YPRVFEQPFDSDRKCMTTVHNIDEKIIAYTKGAVDEILDLCTKILTSKGERNITEVDKKNIHELCLNMSK
DALRVLGFAKREISSIPKEDSENIEYDLTFIGMVGMIDPPRTEVIDAVSTCKEAGIRTIMITGDHKVTAT
TIAHELGIWSEENTVISGDELDNFSDDELDEAVKNTTVFARVSPFDKLRIIQSLKRIGEVPAMTGDGVND
SPALKSADIGIAMGISGTDVAKDSSDMILMDDSFTTIAYAIKEGRRVYRNIQKVIQFLLVGNIAEILTLF
VAILLNWDTPLLAVHILWVNLATATLPALALGVDPPSRNIMKHQPVKSTTLFEKNLIQRVVTQGIFVAIM
TILAYKIGLNIENHSVGQTMAFCVLAFSQMLRAFSQRSNTDSMFNRNNGKNPFLLISFLTSAFLIAVILF
VPVFRNAFNLTVLNNLEWLITIVLAIMSVIQVEVGKIIKRKKRKK
>gi|260687080|ref|YP_003218213.1| putative O-acetylhomoserine sulfhydrylase [Clostridium difficile R20291]
MYNKETICVQGNYKPGNGEPRVLPLYQSTTFKYSSIDQLAELFDLKVDGHIYSRISNPTIQAFEEKISLL
EGGVSSVAVSSGQSANMLAVLNICKSGDSILCSSKVYGGTFNLLGPSLKKFGIDLISFDLDSSEDEIVEL
AKENTKVVFAETLANPTLEVIDFEKIANVAKRINVPFIVDNSLASPVLCNPLKYGANIVTHSTTKYLDGH
ASSVGGIIVDGGNFNWDNGKFPELVEPDPTYHGISYTQKFGNAAYATKARVQLLRDYGNCLSPFNAYLTN
LNVETLHLRMERHSENALKIARFLEKHENVDWINYPGLEDNKYYENAKKYLSRGCSGVLSFGVRGGLENA
KKFVEKLQIASLVTHVSDVRTCVIHPASTTHRQLTEEQLIASGVLPSLIRLSVGIENVEDLIADLNQALN
F
>gi|260687081|ref|YP_003218214.1| homoserine O-succinyltransferase [Clostridium difficile R20291]
MALILPKGLPVINKLLDEGIDVIYKEDFKKELKYEENIDTKIAILNLMPIKIDTELDLLRRIDKTGFNVS
VEFIKISTRESKRSCNEYVKEFYKTFDEAKGEYFDGFIITGAPVEQMEFEEVDYWNELEEIMDYSKRKTK
STLYICWAAQASLYKYYNVKKLPLSQKCFGVFKHKVDKDSKIVDGFENEFFAPHSRHTTVNIEALKENKE
LSIVSHSKEAGPYIITNSRDVFVMGHSEYDKYTLDKEYKRDINKGDKISIPQNYYINDDPSEEPTVKWKK
HSELLFRNWIKNYLIQ
>gi|260687082|ref|YP_003218215.1| MarR-family transcriptional regulator [Clostridium difficile R20291]
MDEMSFKKELLELTRDINMKFTTLLSDFYQPLGITAVQALILSELCEHGEKKISDLGKNLNMTNSNVSVI
CQRLEKNGFLNRIRDIEDQRIVKVKVTNKSLDIQEHISSSIFDSYFENMTSEKLQDMEDIIEGLEKLNKL
LTYIDCK
>gi|260687083|ref|YP_003218216.1| cell division protein [Clostridium difficile R20291]
MDEHKPQKRSALYYYTVIIIVVMFLNALIFPSLMDKKMVEIDYGKFLTMLDTGKVKSVEIENNRIAINPS
SSKDKNIYITGRMDDPELVDRLKNAKVEFTKVIPKENSPLLSILLTWIIPIGILMLFGNLMMKSMQKRMG
GNAMQFGKSNAKMYVSAQSGKRFNDVAGQDEAKEALTEIVDFLHNPEKYKKIGAQMPKGALLVGPPGTGK
TLLAKAVAGEANVPFFSISGSEFVEMFVGMGASRIRDLFKQAKEKAPCIVFIDEIDTIGKKRDNGSGLGG
NDEREQTLNQLLSEMDGFDGGIGVVILAATNRPDSLDKALLRPGRFDRRIPVELPDLGGREAILKVHAQN
VNVSSDIDYNAIARSTSGASGAELANIVNEAALLAVKSGRDIVEQQDFDESVETVIAGYQRKGAVISDKE
KKIIAYHEIGHALVAAMQKHSAPVHKITIIPRTSGALGYTMQVAEDESVLMSKEEAIDKITTFTGGRAAE
EVIFNTCTSGASNDIEQATKIARAMVTRLGMSEEFDMVALETVSNQYLGGDTSLACSSDTAAKIDEEVFK
IVKACHKNAIEILENNIDKLHELANYLLEKETITGDEFMEILNLN
>gi|260687084|ref|YP_003218217.1| two-component sensor histidine kinase [Clostridium difficile R20291]
MDRPNPDILLEKIKNEEEKLSRGQLKIFFGYAAGVGKTYSMLESAQNLKKVGVDVVVGYIEPHTRPETLA
LLDGLEILPVKEIEYKSIKLKEFDLDAALARKPEVILVDEFAHSNVAGLRHTKRWQDIEELLLAGINVYT
TVNVQHLESLNDIVEVITNVSVKETIPDKFLDTNTQLELIDVEPDVLLERFNEGKIYKKEQATRAKNNFF
IKDNLVALREIALRKTAERVNKEVQMTRLSKGDVTVIPTSDTLLACISPSPSSAKVIRTASRISDSTFAK
WIALYVETPNTARLPFDEQKQLQNNLKLAKKLGGEIIVLHGENIIEQILRIAKLRNVTKIVIGRNHSSNK
RFSKRFKKDIVDKLIDEVDYIDIHIIPYKFASDVKYKPKKDKSSIKSKFKISKVDFIKLIFITLMISILA
YAVQSMGFIRENILLIYMLGVVLVSMWTKGYSTGIISSVFNIVLLNYFFTAPLYTLSIADSNYIVTLVVF
SIVGIITSTLTSKIQHEAETAAKREENTKMIYQIIKGFLRLSSKDDIVNKGIELLSLSLSRDVICYLNVD
KHNKSKLYKKNTNNKDKNDLDSEDEKAVASWVLSNSTVAGNDTDTLPGSKGYYIPIVGMNLTLGVVGISC
IDSKLDTEDISLIETIIAQMAIALDREILSEAKENTNLEIERERLRSNLLRAVSHDLRTPLAGISGAVST
IIKNKGTIGQDIIDELLSGVYEDTQWLIRLVENLLSMTKIDEGKLEVKKHSELVEEIISEALQKIKKRIE
NALIDINIPEQILFVPMDAKLIEQVLINLIDNSLKYSKEDCKIEINVYEKDDYVWFEVSDNGPGISKELK
KHIFDRFFTGEEGAKDSRKGVGLGLSICKSIIQAHKGEIMVENNKDKGSTFKFSLPKENE
>gi|260687085|ref|YP_003218218.1| two-component response regulator [Clostridium difficile R20291]
MSKKLILLVEDDKTIRKFISTALLTQDYDVKEAITGKEGISIAVSYSPDVVLLDLGLEDMDGIEVIKAIR
QFSNIPIIVVSAREQDRDKVEVFDAGADDYLTKPFSIVELLARVRVAFRHSQVEAQQKDDVKSTFEVDKL
LIDFDKRKVIVDDVEVHLTPIEYNILSLLAKHHGKVLTHNFIIKEIWGSVIGNETKSLRVFMATLRRKIE
KQPANPRYIITEVGVGYRLNDE
>gi|260687086|ref|YP_003218219.1| putative cation transport-related, membrane protein [Clostridium difficile R20291]
MYILNLNTRETIEDFRDKFYVAENSYLILSAPKNLKLLKETLDIDEITFNDCLKFDEITKLDLFDNYDFL
SLNTFELRDGEAVIEEVNMYLSDNFILVVVNEEHFLFEFVKNIILKNSQLEKNPVINLFKINYLILREVI
KNGFESLEKVEELILQIEDEMMDNINKNHVSRISDVRGLTRIIVKNTRPLLYIGDRIVKENIRYLKYSNV
KKYNLENFQGIDFGIDKLYNFALSTRELADKLLDIYSSRVGEKTNNLITKLTLLTAISAPLTIITGIYGM
NFRYMPELNWIYGYPATLFFMLCIIFIGIIIFKIKKLL
>gi|260687087|ref|YP_003218220.1| hypothetical protein CDR20291_1726 [Clostridium difficile R20291]
MKGILKELTAKLYSFFYFMFWGFYFSAGYFFYKNICTSFLVRPYFSDFEHK
>gi|260687088|ref|YP_003218221.1| putative chorismate biosynthesis-related protein [includes: phospho-2-dehydro-3-deoxyheptonate aldolase and chorismate mutase] [Clostridium difficile R20291]
MIVVLKMGADKNEVKKLIEAIGREGVEVNPIDGTELTVLGLVGDTSKIDAKRIEANKIVEKVMHVVEPFK
KANRKFHPEPSIINVNGMEIGSKKIAMIAGPCSVETEDQIVSIAKDVKKSGAGFLRGGAFKPRTSPYAFQ
GLKYDGLDLLKKAKEKTGLPIVTEIMSTQDIDIFEENVDVIQVGARNMQNFDLLKELGKTNKTILLKRGL
SATIEEWLMSAEYIMAGGNENVVLCERGIRTFETYTRNTLDLSAILAVKKLSHLPVIVDPSHAAGKSWMV
DSLSKAAIAVGADGLIIEVHNDPAHALCDGKQSIKPNEYDELISELKTIASAVGREI
>gi|260687089|ref|YP_003218222.1| 3-dehydroquinate synthase [Clostridium difficile R20291]
MEEKLLVNLKENSYNIFIKKNILKNIGEEIKKIYFGNKIFIVTDENIAKLYLDKVKNNLSESGFEIKSLI
LKSGEETKSFNTLPKIYDSLLDFKLTRKDLIITLGGGVIGDLGGFAAATFLRGISFIQIPTSLLAQVDSS
VGGKVGVDLERGKNLVGSFYQPKAVFIDPNVLLSLPEKFYRDGMAEVIKYGCIKDKTFFNKLLSLKNREE
VMQHIEYIIHKCCFIKKTVVEADEKDFGDRMLLNFGHTLGHAIEKYYNFTGYTHGEAVAIGMYKITLESE
KIGITKKGTSELIKSILMNYNLPYEIELRDNKSIVDAISLDKKNLGDTLKIILLKDIGESIIYNTTSKFF
QEVR
>gi|260687090|ref|YP_003218223.1| 3-phosphoshikimate 1-carboxyvinyltransferase [Clostridium difficile R20291]
MGSLKIYPSKLSGDVKIPPSKSMAHRAVICSSLSNGKSRISNIDFSDDIIATIRAMTSLGAIIEKKEDIL
EISGIFSKEGILNRENQLNQPKLTIDCNESGSTLRFLVPISLAFDGVKRFIGRGNLGKRPLDTYYEIFDR
QNIKYSYKENQLDLIISGKLKPDEFRVKGNISSQFITGLLFILPTLESDSKIIITTELESKGYLDLTLST
IKDFGVEIINNNYKEFIIKGNQTYKARDYKVEGDYSQGAFYLSADAIGEDISILDLKEDSLQGDSEVVEI
LSRMGMEILREGNKIKGITNGLNSTLIDASQCPDIIPVLSVVASLSIGRTTIINAGRLRIKECDRLHAIN
VELSKLGANIEEKEDSLIIEGVSKLNGGVEVWSHKDHRIAMTLAIASCRCDKPIILKDFECVSKSYPHFF
KDFKMLGGRIDEWNMGK
>gi|260687091|ref|YP_003218224.1| chorismate synthase (5-enolpyruvylshikimate-3-phosphate phospholyase) [Clostridium difficile R20291]
MMSGIWGNNLKVSIFGESHGNAIGINIDGLPSGIELDLDKIDKEMKRRAPGKNSISTSRNESDIPEILSG
YFNGRTTGTPLCAIIRNSDTRSKDYGELKNLMRPGHADFTGNVRYSGFNDYRGGGHFSGRITAPLVFCGA
ICKQILSQKGIEIGAHIKKIKNIEDMSFDYVNISKQQLSNLQTLELPLLDLSKEEAMKNTIIDAKNQRDS
VGGIIECAVVGINVGLGNPFFDSVESTLSHLLFSVPAVKGVEFGLGFELADMYGSQSNDEMYYEGNQVKS
KTNNNGGIIGGITTGMPIIFKVAIKPTPSISRQQNTVNIKDKKDDILYIKGRHDPCIVQRAIPVIEAVTA
IGIFDLMKGR
>gi|260687092|ref|YP_003218225.1| P-protein [includes: chorismate mutase and prephenate dehydratase] [Clostridium difficile R20291]
MEDLTRYRNEIDNIDKEIIQLFEKRMNTVLEIARHKMKNNTTILQKDREEKVLSRAIDNLDNKAYSQETV
QFFNSIMEISRGLQKRLIDNDGEQKIEFSLDSSNKKFDLSNVNKYKSLKDELNKKNILVGFPGKSGSFTE
EALNKFFNKTISKKQFKEFEDVFIALKNKEINYGIIPIENSSTGAISETYDLLRKYGFYIVGEECIKIDQ
NLIGIKDTKLEDIKEIYSHPQGIGQCSEFLKQNSTWKLIPFNNTATSAELVRKLQDKTKAAIASKKAASI
YELEIISPCINDIANNYTRFVVISNQIHIEEESNKMSVVFSVEHEAGKLYKVLGYFAENNINMTKIESRP
MKNASWRYFFYIDFECSIYNSKVYDLLELIEHNTAYFKFMGVYKNKTE
>gi|260687093|ref|YP_003218226.1| shikimate dehydrogenase [Clostridium difficile R20291]
MNFFGLVGEKLSHSVSPQIHKRIFEILNIESAYKNFEIPKEDISKLDGAIKLLGIQGVNVTVPYKERIMK
YLDFISPEAKRIGAVNTILLRENMLYGYNTDYFGLDSMFKMANIDVQGKVAVILGTGGASKAALTYFIDS
GIEKLYVSTRKKDDKKLLNSKAILIDYEELKHIKGDIILNATPVGMYPNVGISPVSKSIIQNFDILIDLI
YNPGETEFLRIGNSMGKKTCDGLYMLVGQAIKSQEIWQDTKIDNSILDVIYNELKLEFL
>gi|260687094|ref|YP_003218227.1| shikimate kinase [Clostridium difficile R20291]
MINKTKEKLILIGMPGSGKTTIGKLLAKEYNCSFCDMDDYIIQISQKSIAELFSEGEDIFRNYETQACRE
LSISDKTVISTGGGVIKKDVNMEILKETGIIIFIDRPIQKILEDININSRPLLKNGKDRLYNLYNERINL
YKKFSDIEILNDKSLNNAVYNITNAVSENFKFDFKEK
>gi|260687095|ref|YP_003218228.1| putative prephenate dehydrogenase [Clostridium difficile R20291]
MNIVIVGLGVIGGSFAKALKKAGYENVFGVDVDLETLKKAEKAKIIKKGCTTGKELFKKADLIILSIYPR
LVVDFLNNNKNFFKKGTIITDTTGIKETLINDVLQIIPDDIDFIFGHPMAGREKKGIDFASEQVFNGANY
IITPTGRNNIKNLELVENLILEIGFKRVKKLTSQKHDEIIAFTSQLPHVMAVALINSDEEGRDTGKFIGD
SYRDLTRIANMNEDLWSELFLGNRDNLLKVIENFESEVNLVKEAIFNNDKNKLIEYFKKSSIRREALEK
>gi|260687096|ref|YP_003218229.1| putative signaling protein [Clostridium difficile R20291]
MRCSYLKKNRLIIKNISIAFIVLFFFSVFTFFYIGNISRVLEYETNDIMTVTITGWIILSFLFLCIIIYI
LYSKAKSQKTIEKVAYTDFVTGYSNWRKFELDVTNLLKKTSQNNKYAMVIFDIDKFKAINDIYGHKKGNL
ILKDIADTLNELTNINETFARVSADNFNILLTYNKKEDIINIIKKIIANNELVNLSFGIYEIKDKDLSVS
VYSDRASLAKSSIKNNSDVNFAFFNDKLREKLLLEDKIEKEMEYALESGQFVMYLQPKYNIKLDKFCGSE
ALVRWQYTEKEVIYPGDFIPIFEKNGFIRKIDMYILEQACKEIRSLFDKGISPLPISVNFSRVDFLKKDF
IENIVNICDRYKIPYSLIEIEITESSMFGDTDTLFNVSRNLQDIGFIVAMDDFGSGYSSVNMLKNIPLNV
IKLDRGFFVDDKDVDKSQIVIKSIVSLIKQLGIRVVAEGIETRSQIEMLKKANCDIVQGYYFSKPLPIKE
FEKLVYKI
>gi|260687097|ref|YP_003218230.1| putative signaling protein [Clostridium difficile R20291]
MIRAKSLKNVLSIVLIFLFTIISFSDFAFKTNVQEEENSKINLREISLQSSNAIKIKLDSSLSFIKSVAN
MVSYFNTIDNSKIVPLLANISKESDFQRISIVSPDGISHTSDGKIINVSKYQYFKKAIKGESNISEVVKS
PIDGKDTFVIATPIFNKNNKIIGVLYGSYYNDKLAEFIDITSFNSEGYIDIFESSGQFVLKSSHTNKLIK
SSSNIYDIFKKASFDDGYSYKKIYEDTKNNKSGFTSYEYKGENRYATYTPIGVNDWYVISVIPQYTVRRN
IDKINQLAFSLIFKVFLLFIMLIIYIIYKNNKSQKDILKANKEISSITNSIPGGVQKCTLGETCNINFLS
DGFIELFGYTREEIKTLFNNDFYSLIHKDDVERIKKEISKQLYKNKTIELEYRIITKNGNTVWVLDKGEL
ITEPDGKEYFCCVTVDITRTKQLEQEMEQKNLELEMISENILGGIIITEFNDDFTIKYTNSGYLSMIGYT
REQLENELKYKACNLVFYEDRKKALESIQHQLNTKGIAVYQHRIRRRDGNIIWVSIKGRLIIDDDGIEKG
IWILNDITDLKNAEQKLKINEERFRIALKQTSNTIFEYDIKTKSLLNTSKELDKYNIYKITKNVPYSLVE
SGVIHKDFSDDFINMYENVINGAKKASCVVKMKLPDENYIWNKVTLTTIFDEDGNPVRAIGIQEDISKQK
EAEIRYNQEGKYHSAILSEAMITYEINVSKDTFIKGNESWQKPFGIKPDNNYSEMVKTISNSIIHKDNKE
VFLNTFLCKNLLSAYNKNITEIKLEYRRMNQENKMIWVICTMHLIKDSITNDIKALAYVKDIDKQKNEEI
KLKLKAERDTLTGLYNKGTTENLINDFLNSDEASLGMHAFLIVDIDNFKSVNDNLGHVFGDKVLFEVSKH
LKPIFRKDDIVGRIGGDEFIVFLKNIQSFENTKKKAEKICDIFRNSYTENKKTYKISGTVGISFVPEHGT
VFEELYKKADIALYYAKSKGKDKYALYNNCIYQNELENNISDNNIKLANKCEKSKPVLKEILDSIDNYIY
IVNPNTYELLFVNNKVSRLDLEIKLGETCYKSLLKSERPCNNCPLNGLEENKHSKFKIETNTFGKNISIA
SWINCIDGEYNCLIECIDSSLYKNK
>gi|260687098|ref|YP_003218231.1| hypothetical protein CDR20291_1737 [Clostridium difficile R20291]
MLNSITLILGIIFTIYYFYLKIVFGGISFSEIFLVVGIVLIIYQIFKKKIKEKKVFYRVLKIIISIFLIV
FVVTESLIIFYPKNSLESKSDYLLILGASVKKTTPSTTLKGRLDTALKYLKINDNCYVVVSGGKGSGEKI
TEAKAMKDYLIKNSIDKNRIIEEDKSTNTYENFKYSKLKIEEHSQRKLSDLKVKIVTTDFHVLRSKILAY
RNGYKNTSFYASKSKLSFVPTYYTREFFALWKTIIFDR
>gi|260687099|ref|YP_003218232.1| hypothetical protein CDR20291_1738 [Clostridium difficile R20291]
MNFLKENSTFYFATVEDNKPRVRSFGFIMDYEGKLYFGIVKYKTSYKQLLVNPNVEISTTSKVGKWIRIK
GIEKTRYEFISSLFIYYLSKMIVFHNAKNSLV
>gi|260687100|ref|YP_003218233.1| putative membrane protein precursor [Clostridium difficile R20291]
MRWILKIILFPISIALSILIAFLSFLLGIGTAILYLLMMFCIFGAIASFLQKEVTIGIEALILGFLLSPY
GIPMVGTAVIAVLTGVKEAIRSI
>gi|260687101|ref|YP_003218234.1| putative conjugative transposon protein [Clostridium difficile R20291]
MYLFDEQPIVANKTLAREIGLNEALILQQINYWIEINKKSGKNYHDGKYWTYNSIRAWQENDFDYMSFDT
VKRTFSKLEKAGYLLVGNYNKDPRDKTKWYTINNDKLEELYMDMDLKKQKIQTEALKNSMPNALGQNAPM
DKGKISQCNNADCTNAQVQNALMQKDNLHQPLPENTTNNTTNNTTNNSAYISIHPSIKEKNQLFSENMKG
GRIDISYKNIYQNCLEELRHQTGYYEHMSIGNKSVAEEFDEILKILADVMVLDDESFITINQTKISVQVV
KERFRKLNSGHLEYLVGVLRENEYRIRNIRAFVLTAAYNAPSGIDAYYSALVSYDMRGGY
>gi|260687102|ref|YP_003218236.1| site-specific recombinase, resolvase family, putative [Clostridium difficile R20291]
MRNEKITPLYERLSRDDELQGESNSISNQKQMLEDFARRNGLPNPTHFTDDGISGTRFDRPGFLAMMEEV
EAGRVEAIVIKDMSRLGRDYLKVGQVMEVLRQRGVRLIAINDGVDSLKGDDDFTPFRNIMNEFYARDTSR
KIRSVFKSKGMSGKHLTGTVIYGYLWDEKREHWLVDEEAAEVVRRIFSLTLEGYGPYQIAYKLSTDRIEI
PVVHLARFNEGVNRSKPVKDPYGWGSSTIVNILKKREYLGHTINFKTRKHFKDKKSHYVSEDEWTIFENT
HEAIIDQQTFDLAQKIRSNVRRYPNGWGEAAPLTGLLYCADCGGKMYVHRTNNGKRVSQYTCSNYTKVPC
GTLCPTQHRINESAVLTLVSDTLRAIAEYSRNDRTEFIHTVQETQVAQQSADISKKRRRLAAAQKRAGEL
EKLICKIYEDNALGKLPDARYKALDAQYAKEQDALEIEIAELEKAVTGYEQSQKSAEKFIALIDKYENFD
TLTNTMLNEFVEKILVHERARKGSQDTTQEIEIYFNFLGRYIPPSLQPVPLTPEEQEELRKKEERKDRLH
QNYLKRKASGAQKQYEDKIKAKKKAEMDAKKALIRAEDMKKGVFSTIGQLPKEEPRKGSIAASAAV
>gi|260687103|ref|YP_003218237.1| hypothetical protein CDR20291_1745 [Clostridium difficile R20291]
MSKLTYIRCGDYDIPNLKLSEQPETSIGKYGRMRKSYLKEHRPILYNHLLMSEKLYPHLLEIERTAQGRV
ETMLPHMMEVAGVTEELKACDPMRWVGLMNTLTAQIEEILIRELICS
>gi|260687104|ref|YP_003218238.1| hypothetical protein CDR20291_1746 [Clostridium difficile R20291]
MRKMLTFEKILKVFQAYLDDDPLYEVVQTSHGYTLMAWEPHRNDWYSAEIQKTPEDLRNALLGTYANFLE
DKITGNDRDLTVTETGEIQQRCRELLEKCREP
>gi|260687105|ref|YP_003218239.1| hypothetical protein CDR20291_1747 [Clostridium difficile R20291]
MAKVEDCPGFETFGADVKAAREARRLARKTLAEMVGIEWRYLANIENQGAIPSLPVMIQLIKVCGLPVER
YFNPEIMREESEQRQRVSHKLKLCPEEYLPIIEGAIDGALKMEQTAKQKEDA
>gi|260687106|ref|YP_003218240.1| two-component response regulator [Clostridium difficile R20291]
MRKSRLTEGQNKERSCAMNKILIIDDDKELCALIKRSVQAENIEADFCNTGKEGLQKLREQEYQLVVLDV
MMPGMDGFETLEEIRKEYSLPILMFTSKNDSISKVRGLRAGADDYLTKPFDMDELIARIASLIRRYTRFN
QQAGAIQKLNFDGLQIDLENRSATTSNGTFELPPKEFDLLLYCAKHQGKILTKQQIYEEVWGEEYFYDDS
NIMAIISRLRKKLEVNPSSPKYIQTVKGIGYRFNKEV
>gi|260687107|ref|YP_003218241.1| sensor protein [Clostridium difficile R20291]
MEIIVFLSIVIAVVAVLTSIVLVRRVKKQIAEMTDVLVDVKNGNGNRRILSATNELTAPLAYEINEIVVA
YESRLSTVRQTEETNRQLMTSLSHDVRTPLTTLLGYLDATHKGLVTGKDRDDYIETARRKAHDLKEYIDV
LFDWFKLNSNEFALEIQSVEVAELTRNILIDWIPIFEDKQVDYDIDIPEQPVRVRLDMDSYMRIINNLIQ
NVIAHSHADKIKISLSKKENNMELLLADNGVGIEKEDLKHIFERLYKCDKGRSEKGSGLGLSIVHQLVEK
MGGSITVESLPGKGTEFMLLFPLES
>gi|260687108|ref|YP_003218242.1| putative lantibiotic abc transporter,atp-binding protein [Clostridium difficile R20291]
MIEYLTEQEVLNMDTNYIIETKNLTKQYGSQKSVADLNIHVKRGRIYGLLGRNGAGKTTTMKMLLGLTKP
TSGEVKIWGKSLQGNEKKLLPRIGSLIESPGFYPNLTATENLRIFATLRGVPNSHAIRDALDLVGLPYKD
KKLFSQYSLGMKQRLAIALAVMHDPELLILDEPINGLDPIGIAEVRSFIRELCDARGKTILISSHILSEI
SLLADDIGIIDHGALLEEESLAELEQKSSKHIRFTLSDTAQAARILERNFHENHFSIQDDHNLRLHNLDL
PVGKIVTAFVENGLEVSEAHTCEESLEDYFKRVTGGEGIA
>gi|260687109|ref|YP_003218243.1| putative lantibiotic abc transporter, permease protein [Clostridium difficile R20291]
MLKLIKCEFLKLKRKKFIPLIILAAFLFPIPLTYLMTTPSMMERYTDRADAFDGLFNMVLGYGIQFLLPC
IIGVIAAILFFMERDNDTFKNLRTIPVTSTQMVLAKIIVLFLFGIVFCVASTIATILCGIGTLEVYGIGY
KLFLAVETGIFITAGTLPLIVLVVFFSKTYVFSILLCVFYSVLNMSATALFDTLPKTMLWLLPTPLTTFW
SAGDMAAHGIKMDLEQMTGLIPSTFQVVFILGIMALVSFLLIDRLYKQRGE
>gi|260687110|ref|YP_003218244.1| putative lantibiotic abc transporter, permease protein [Clostridium difficile R20291]
MVRIVKTEFYKLKRYHILWAGVALMLLSVLLTLFTSMANDGSVWDFAYLTEQVIKNNMSMIFPMCISLIA
GYMISREQTDDTLKNILTVPISFKKLLTGKLIVCGVLSIIFGLICSLFTIIAEMIVGFPGFEISLALKAA
LQITAVNFFLYLAVLPIIALTCRRAGSFLVGVIIAFVYGYGGMFAAGNMTLANLYPITASLGMVGYRSYD
TAVNWNIGTCSCSLALAVVISAILILCMKEREATQTKKKAKKVAPKKGW
>gi|260687111|ref|YP_003218245.1| hypothetical protein CDR20291_1753 [Clostridium difficile R20291]
MKKIVLALAFVLLGSFMISGCSKDEILNHYNNIVQSAGSIELTGKSSLQGEKEKGIDDYTGTYTADYANF
SGTEYLFGGTSIKREAGKELSIDCTLEITEGTAKVFWISGSDEAVTLIEATGTYSDTITLPDGGNYIGIE
CENFTGNIELNIE
>gi|260687112|ref|YP_003218246.1| rna polymerase, sigma-24 subunit, ecf subfamily (ecf subfamily rna polymerase sigma-70 factor) [Clostridium difficile R20291]
MEVTINYNGQAVAVEVTLEVYEFLDRADHKTENLFHEQRRHWDGREFDEYIAFTEGVGVYSETPEEYLCR
METLHELMAVLDTCTEAQRRRFLFYALDGLSLAEIGVLCGCSKVAVYQSVEAVRKKFINFFENRLNE
>gi|260687113|ref|YP_003218247.1| sigma-24 (feci) [Clostridium difficile R20291]
MKTINLRWMYPHYRHDEFVDVTDEVWAAMYQAKREMENYERRKVYHRAYYSLDAYSWLENYALEHSRSPE
DILLEREEMTTRLHLIAALPVALAHATPTQARRVHAYYIAGIKQPEISRREGVHSSKVSVSIRRGLRNMR
RCYDGLFQTE
>gi|260687114|ref|YP_003218248.1| rna polymerase, sigma-24 subunit, ecf subfamily [Clostridium difficile R20291]
MMVFSKQSEGVPMQTINLKQYYPFCKEDIFVEVSDEIVEAFLLDKRAEAARDRKMFRYKAFYSLDCNDGI
ENAAIGWAQPSPEDYLIEKEELAEYEELIRRLYEAISSLPPMQARRVHARYMLGMKVKDIAAMEGITPSQ
AGKSIHAALRRLRRYFARQKWTVNL
>gi|260687115|ref|YP_003218249.1| hypothetical protein CDR20291_1757 [Clostridium difficile R20291]
MPDMNEKITAHPQKEEREKVLKEIRQLENRKKILENKQRNEERRVRTRRLIERGAVLEGIFPLAPDLSGA
EVKAFLIALSHLPGAAELTANLPKSGDTP
>gi|260687116|ref|YP_003218250.1| addiction module toxin, rele/stbe family [Clostridium difficile R20291]
MKETKYTVKYTTSFKKDYKRAIKRGLKIELLEQVVALLAMGEPLPDKNRDHDLSGDWAGHRECHILPDWL
LVYRIEDDVLVLTLARTGTHSDLFGK
>gi|260687117|ref|YP_003218251.1| addiction module antitoxin, relb/dinj family [Clostridium difficile R20291]
MNLLLNIRAKYCFLRANGIYYNCQQKGVDRMAGNTTNISIRMDADLKAQADALFTELGMNLTTAFNIFVR
QSLREGGIPFEVRLEQPNKETVAAMLEAERIAKDPSVKGYNDLDELFADLKR
>gi|260687118|ref|YP_003218252.1| hypothetical protein CDR20291_1761 [Clostridium difficile R20291]
MKNNKSEPIPVMDYRQYRRARRLVHECCNYIGGNCIALDDGEKCVCVQSISYSLLCRWFRTAVLPQDKEL
ETALFHRLNAKKCAVCGALFTPGSNRAKYCPECATRMKRINAAKRKRKQREKCHALGAEKPL
>gi|260687119|ref|YP_003218253.1| phage protein [Clostridium difficile R20291]
MSDNRKYYYLKLKENYFDDDSIVLLESMQDGVLYSNILLKLYLKSLKHGGRLQLDEDIPYTAQMIATITR
QQIGTVERALQIFLKLGLVEVLDSGTFYMSNIELLIGQSSTEAERKRAARLQNKALSAPRTNGGHLSDIR
PPEIEIELEKEIEIKREIEKGRSARAYGRYQNVFLTDGELADLQASFPTVWSQYIEKLSEYMASTGKRYQ
SHAATIRRWAGEDAKKTVTPSRNRDYSVKEDETV
>gi|260687120|ref|YP_003218254.1| replicative dna helicase [Clostridium difficile R20291]
MPRCICQCQREAEEQRKAAEERQRRMERIKRRKAQGLQDRYLYDYTFANDNGQNPLMDKARAYVENWKEA
YKSNIGLLLFGDVGTGKSFFAGCIANALLDRDVPVLMTNFPTILNRLTRMFSEDRSEFIASFDEYDLLII
DDLGVERSTEYAMEQMFFVIDSRYRSRRPMIITTNLKLSELKNPPDLAHARIYDRILERCAPILFDGKNF
REENAGATRQTAKDIVNSKHD
>gi|260687121|ref|YP_003218255.1| hypothetical protein CDR20291_1764 [Clostridium difficile R20291]
MVRTKIFVKEDTKMLYTEKEKHEIERVKEVFAEHLRQSPDFELLWSDKVGYVWLAIGVNPVYVDTGTRIE
SAADLCYRCLDDVATDVLYMTGNDHALEAADPLELAEIKRRWEPYINQLPDYAYLCKDLLNGKM
>gi|260687122|ref|YP_003218256.1| hypothetical protein CDR20291_1765 [Clostridium difficile R20291]
MEHLPKKIHHNGISYTLVGDYYIPDLKLSEEIRPIGRWGRIHKAFLQEHRPGQYNELLLSGKLWTYLADL
NEQADDRLACIISQMQAAEGVTEELKARDQLAWVGGMNSIRSRVEEIILSEMIFV
>gi|260687123|ref|YP_003218257.1| transcription regulator (yobd protein) [Clostridium difficile R20291]
MYAKLTIPERLKDLRVVDKHLTLEQLAEQTGLSKSALGKYETDDYKDISPFAIATLADFYGVSTDYLMGL
TENKNHPNIELQSLHLSDDMVELLSSGKINNRLLCELATHPNFRRLMIDMEICIDQIANMRVEQMNLVLE
ATRQTVMNKYAPGEDDLYMRTLELGQVQESDFYSHVMHDDLDSIVRDIREAHRKDKTTADPQPTLDDVKE
KFEQAIGQGSDTEMLIHEFCDKLQIPFEKISSEDFSAFLRILSLSKQLKSSNNMRGKASPIPPNRKARRK
RK
>gi|260687124|ref|YP_003218258.1| hypothetical protein CDR20291_1767 [Clostridium difficile R20291]
MTGCKGYGLRGSDARTEIERTKEADTPGEIPGRSGLQADRQTETSLSIMRGAWLRSKETEEIIMTLSMKE
KKILYAYGCPSHHNTVTRLKWLTALTVDPEAKRRMLGLARKVETEVGENWYEDFYHHLRMEMDEYRRLKR
SLRVLKSYTDYEEDLYEEAV
>gi|260687125|ref|YP_003218259.1| hypothetical protein CDR20291_1768 [Clostridium difficile R20291]
MEAQNARNEKTRHTERNRTVEDLLKNNKTCPEESIYQIGTMGESVPPDTLFSIVNEFYEEFERRFGSHIH
ILDWALHLDEGTPHIHERHVFDCENRYGELCPQQEKALEELGIPLPNPEKPKGRNNNRKQTFDAVCRTIL
FDIARRHGLHLDQEPSYGGRDYLEKQDYILMKQKEQLAAQEQKLEELTLKIEDVETLLDDVSDAAYDKAV
EVVTDTVRQETHKEDIRLVEESKKWVLSPERKAPKKEREYAAERLDGVITKIKNAMQHALAKIQRTLMQP
EVKQAGKEQVKKKAKESIMDILAKAKINADRDNRERWEREGRIAPTKKNDIEL
>gi|260687126|ref|YP_003218260.1| hypothetical protein CDR20291_1769 [Clostridium difficile R20291]
MTCCPFHDDKHPSMKVDRRFHCFGCQADGDVIDFTARLFGLNKKDAALKLAEDFSVGFDAKGHDPPRRKP
GKRKISEELRYRQAEQKCFRVLCDYLHLLERWEKEYAPQTPEEAWNPLFVEALQKKPYTEYLLDILLSGS
MEERACVVAEYGKEVRKIEQRISEFTASHPAGRHERSRSFSAGAER
>gi|260687127|ref|YP_003218261.1| hypothetical protein CDR20291_1770 [Clostridium difficile R20291]
MSAAEALAPEQSVDEVREGLSVTEKGQPANTIGNCRTVFSHDPLLRDAIRLNLLTDRVDIVRDLGWRRNT
SALTDTDVKYLLLYFEQNYGLTSEKKMTAALSIVANENCYHPIQDVLNGLVWDGTPRIRSCLHHFLGAEV
SDYVEEMLKHFLLGAIRRVFSPGSKYEEMLCLVGGQGAGKSSFFRLLAIRDEWFSDDLKKLDDDRVFLKL
QGHWIIEMSEMLATSSAKSIEEIRSFISRQKETYRTPYEAQPKDRLRQCVFGGSSNTLDFLPLDRAGNRR
FLPIMIYPEKAEVHILEDEDASRAYLLQVWAEAMTIYRSGKYSMKFSKSIQRQLVEVQKDFMPEDTEAGQ
IQGFLEHYTGSMVCSKQLFKEALGHTYDEPKRWQLHNINEIMNTVVTGWKPFSNPRMFAGYGRQKGWERD
VSGNELPGNEDGFVELSEEECRQLELPKEWIA
>gi|260687128|ref|YP_003218262.1| hypothetical protein CDR20291_1771 [Clostridium difficile R20291]
MSRKKQVYEKITALYCRISLDDGGDNESMSISNQKLMLRDFAEKHGMFQYEYYVDDGYTGRNFNRPSFQR
MIADIEAGKIGCVITKDLSRLGRNYIEAGSYIEIFFPKHNVRYIAVTDGVDSLTRQEMDITPFKNILNDM
YSRDISKKVLAGRMTRSRQGKFCGGQPPLGLMRDPEDKGHLILDPETAPVIRKIYDMALDGWGCMRIAKQ
LMDDKIPITRVKSNTECDVNYYSWGSARISHILRNPFYKGAHLVCRTHQKGIRSNTYDIIPREDWEVIEG
CHEAIVTPEEWEQVQDIIDRRPTIMKGNACPFYNLFHGLVYCATCGKSMQVRYEKVGRTGKNRFTGEMRE
PIDRAYYICQTYNRLGKNACTSHKIEARDLYNLVLKDIQELAAQAMKDADAFYQRLSSRMERRYLVDASQ
TEKERKRLEDRNQEIDGMFLSLYTDKAKGVLTEQRFMKLTAALEQEQEANQKRLHDLAVMQSRADAQESE
VRTFIKEIRRYAAIAELDESVLNRLISKILIGEVKKVDGQKVQEVRIVYNFVGEIPEIAA
>gi|260687129|ref|YP_003218263.1| hypothetical protein CDR20291_1772 [Clostridium difficile R20291]
MLQSNKITALYCRLSQEDMQAGESGSIQHQKMILQRYADEHHFLNTKFFVDDGFSGVSFEREGLQAMLQE
VEAGRVATVITKDLSRLGRNYLKTGELIEIVFPENGVRYIAINDGVDTAREDNEFTPLRNWFNEFYARDT
SKKIRAVKQAQAQKGERVNGEYPYGYIPDPNNRHHLIPDPETAPIVKQVFAMFVSGVRMCEIQKWLAENK
VLTIGALRYQRTGQARYQRAMIAPYTWPDKTLYDILARQEYLGHTITAKTHKVSYKSKKTRKNEEEQRYF
FPNTHEPLVDEETFELAQKRIATRHRPTKAAEIDIFSGLLFCAGCRHKMYYQQGVNIEPRKFSYSCGAWR
NRARTGSECTSHYIRKNVLLDLVLEDMRRVLRYVKEHEQDFICKATEYGDMEARKALAQQQKELFKAQAR
MTELDTLFRKLYEDNALGRLTDERFVFLTSGYVDEKKSLAARIDELQQQIATVTERKRDISRFIQIVGKY
SDIQELTYENVHEFIDRILIHELDRETNTRKIEIHYSFVGQVDTEQEPTQVVNHDRRNMVDVKSIAI
>gi|260687130|ref|YP_003218264.1| hypothetical protein CDR20291_1773 [Clostridium difficile R20291]
MELSSSDKERIQHQYDALAKKTLVGEAKSHRRTLAKRAAREVTFSDLSESELAQLFTTDEYESDYFRFQV
SGFDVLVKNELLAEALNALPERKRDIILLSYFLDMSDAEIGELLNVVRTTVFRHRKSALAKIKQYLEGKA
DDEYR
>gi|260687131|ref|YP_003218265.1| hypothetical protein CDR20291_1774 [Clostridium difficile R20291]
MKRLPKYTPAEVRNDPYGFTYKEMSEVIGENEAKALYEELYKQLPRKKNLSMLVKNICKSSDTEKYVYEL
KDNKYIETVFIKRRDGGTVCVSTQVGCPVGCIFCESGRNGFVRNLTSSEIVQQIILLRRKVNRIVFMGMG
EPLFNYDNLIKAIHILRDRYGLNFPTDGITISTVGPVDQLKKLREEHLKIQLTISLHAATQSARNRIIPH
MRIYAIEDVVKQALSYSERHNRKIVFAYLLLPGINDRPSDVRQLAKWFRGKKVMINVLQYNPTSNSRIKA
PQKREIVAFKHQLEQAGLEVTMRVSHGREINAACGQLANTYNKFKKK
>gi|260687132|ref|YP_003218266.1| hypothetical protein CDR20291_1775 [Clostridium difficile R20291]
MELIEKYDPTIDLIFLDIQMKVVDGLHAAERIRQMDETVGIIFLTTLTQYGLEGYKYHATNYIIKPMKYA
RLKSEMDKFLERSQKEDTPSLVITNDTGKYKVPLKSIRYVETYNRNLMFHTEQENIICYKSMKEVERELC
DKDFVRCHTSYIVNLFYVKGIKKLDIELITGEIIPISQPKRKEFMERLTDYWGDML
>gi|260687133|ref|YP_003218267.1| putative conjugal transfer protein (putative single-stranded dna binding protein) [Clostridium difficile R20291]
MKQEMININANLVAEPTFSSFEKEGEEVEVVNFTLVKKYGKGKEYINCAAYGEKAEKAEDFEKGDLIHVF
GYFKKREKEGKTYKNFVVKSYNKIEKKEENEEE
>gi|260687134|ref|YP_003218268.1| hypothetical protein CDR20291_1777 [Clostridium difficile R20291]
MSELKPRITENGIDYILVGDYYIPDLKLPEEHRPIGKYGRMHREYLREVHPAKLNTLTLTGELWTYLADL
NEQAQERLDTIMEQMKDAEGVTEELKRTQQMEWVRRCNNIHNRAEEIILQEMIYS
>gi|260687135|ref|YP_003218269.1| hypothetical protein CDR20291_1778 [Clostridium difficile R20291]
MENNHFNVAWAKSTALYTKAASVLGIGYPEMMVLYALESMGELTQKQIAENFGMQKQTVHTVVSALQKKG
YLLLEASEGDKREKRIVLTESGQVYAHRMIAPLRKAEEKVYRTIGNERLQAMCEILDLFNLLFERELRGG
LGSE
>gi|260687136|ref|YP_003218270.1| hypothetical protein CDR20291_1779 [Clostridium difficile R20291]
MNNKRTFFQYVIPSVLSFALSGVYAIVDGFFVGNSIGDAGLSAINIAYPITAVLQSVGTGIGMGGSVKYS
ILKAAGNEKKAREFVAGATWLMLLFSAVLTVTVFFTSEKILSALGASGELLTLGNEYIKVIALGAILQVF
GTGLVPFMRNYGGSLWAMIAMICGFATNIALDYTFVWVLGRGMYGAALATIIGQGVTMAVALVYCAIKKN
LTLKIAPVDTPKTAFQILKIGLAPFGLTLAPNISLVIINRFSVYYGGQEAIATYACISYIICIVYLLLQG
VGDGSQPLMSQFYGAGEEKSLKQTKTLAYEFSMVLAVISAILIYLLRGKIGLLFGSSAEVNAGVIKVMPI
FLVSVPFDAITRVSAAAFYATEKSVLSYVLTFIEPIIMLVLMLMLPPVFGGQITIWWSAVFAKVITASVS
IVLSVRYSAQRNR
>gi|260687137|ref|YP_003218271.1| hypothetical protein CDR20291_1780 [Clostridium difficile R20291]
MKGATSIQERLWELRKDKGLNLEELSKLTGISKSALGSYEKEDFKEINHGNLITLADFYGVSVDYLLCRT
ENREQINTSLTELHLNDEMVALLKSGRINNRLLCELATHKDFIKFLADIEIYVDGIATMQIQNLNALVDT
VRHEIIERYRPGEDDPHLKVLQAAHISDDEYFSHMVLDDLNLIIRDIRETHKKDSESAPQTTVADELKEN
LEAVENFKGSRDEKLVILYCKQLGINYKNLSEEEFRWLIRILKKSKKMGTPISQRKKR
>gi|260687138|ref|YP_003218272.1| hypothetical protein CDR20291_1781 [Clostridium difficile R20291]
MNFEFMTIDTPLPPCMPFPRALTGFPVSSTAKVMYCRMLDAMLSKGQEDENGILFVCFPVTAIAAVLSRS
PMTVKRSLNELETAGLIMRVRQGVGEPNRIYVLIPGKEDAALA
>gi|260687139|ref|YP_003218273.1| hypothetical protein CDR20291_1782 [Clostridium difficile R20291]
MPDTSKLEKLNRELEKSEKKLRKAINDEKVLQHQLKQLTRKERTHRLCTRGGMLESFLQEPERLTDDDVM
LLLKLIFHRQDTQELLKKLLERKKPETP
>gi|260687140|ref|YP_003218274.1| hypothetical protein CDR20291_1783 [Clostridium difficile R20291]
MSLLSLIGGRGGVLPPHFGQKKSRRPFSDFLLGVPLCGRRVFNCKSSGQVDPM
>gi|260687141|ref|YP_003218275.1| hypothetical protein CDR20291_1784 [Clostridium difficile R20291]
MIADFAIHDPHPPGHNPHAHVMLTMRAMDEHGKWLPKSRKVYDLDENGERIKLPSGRWKSHKEDTVDWND
QKYCEIWRHEWEVIQNRYLEANDRPERVDLRSYARQGLDIVPTVHEGTAVRQMEKRGIQTNIGNLNRDIR
AANRLMKSIRQLIQNLKGWITELGEKRKELLAQKAAEEATLLPNLLMKYMEIRKEERKDWTRAGQNRGTS
QDLKAVSEALSYLRQKGLSTVEDLEVFLESSGKSAADYRNQMKPKETRSKVIDGILASRTDCQECKPVYE
KYQKIFFKKTKEKFKQEHPEVARYEKAAAYLAKHPDDKDSTQKELQEEQETLLEEIAALKTPLTEVQEDL
KKLRDIRYWVRKATPGTEESKEPPKKQPIKEVLQDKTDEKKAQRTAPEQTKHKQQDMEL
>gi|260687142|ref|YP_003218276.1| hypothetical protein CDR20291_1786 [Clostridium difficile R20291]
MQPPQSIEEIKAGLGTTEKGGVRQSIRNCLTVFQRDPLLSGAIAYNILTDRKDIIKPIGFHRESTALNDT
DMKYLLLYLEETYGLTNEKKIDNAIGIVANENKYHPIRDYLNTLVWDGTERIRFCLRHFLGADADDYTYE
ALKLFLLGAISRAFQPGCKFEIMLCLVGGQGAGKSTFFRLLAVRDEWFSDDLRKLDDDNVYRKLQGHWII
EMSEMMATANAKSIEEIKSFLSRQKEVYKIPYETHPADRPRQCVFGGTSNALDFLPLDRSGNRRFIPVMV
YPEQAEVHILEDEAASRAYIEQMWAEAMEIYRSGRFKLAFSPAMQRYLKEHQRDFMPEDTKAGMIQAYLD
KYTGSMVCSKQLYKEALNHAFDEPKQWEIREINEIMNQCISGWRYFPNPRMFSEYGRQKGWERENPATDL
CNPSEKTRDGFVEVSEQMELPF
>gi|260687143|ref|YP_003218277.1| hypothetical protein CDR20291_1787 [Clostridium difficile R20291]
MNLCFVFCHRQLSSIHENSQTEGVGNEVRQRASKDLANNLNLAMVTIYTFLLFFCCFGCHRGEKPRNKGF
SPATGSATG
>gi|260687144|ref|YP_003218278.1| hypothetical protein CDR20291_1788 [Clostridium difficile R20291]
MAMMNEMEYRTIGSALAGGYRAAVYCRLSKDDDLQGESASIANQRDMLEKYCEKQGWEVVAVYQDDGFTG
LNMERPDLQRMLRAIERRQINLVITKDLSRLGRNYLQTGHLIEDFFPRNGVRYIAMNDGIDTLRDNNDIA
PFKNILNEMYSKDISKKVHSSYLLKAQKGQFTGCLAPFGYRKDPEDKNHLLIDEETAPIVRLIFGYALNG
HGPNYIRRRLEEEKIPCPTWWNRERGLRNTRTKWEKKDPEKGRYMWDFSVIKDLLMNPVYTGAIASQKKD
YRFKIGTIGEKKPEDWIVVEGQHEPLIDRMSFDIVQNKLKSRQRPGQTNEISLFAGLIKCGECGKSLTVR
YTNAKHPQQIYSCKTYNAFGKNHCTQHRIDYDTLYSHVLRKIRECARAALMDGEAVADRLTNTCEAEQRE
QREAMERSLTRDEERIEVLDKMVMRLYEDMIAGRISEQNFNTMLEKTQTEQAELKAKVSEGRKRLSDEVQ
LANDAKQWVEAIQEYANITELDAATLNRLIKEIVVHERIDEDKTRHISIEIHFNLKPIPEVEQVTA
>gi|260687145|ref|YP_003218279.1| putative conjugative transposon membrane protein [Clostridium difficile R20291]
MFGIFDKIEEFFKELLLGGIQANLESMFLDINDKVGAVATDVGKTPMGWNGDVFAFIKSINDSVIIPIAG
LIITAVLCIELINMVMQKNNMHDTDTFEFFKYIIKMWIAVWLVSHAFEFSMAVFDVAQHMVNKAAGVINT
SAVISGDQIVKMVDGLKDKGLGELVMILFETSLIKVAIQVISIVIMLVVYGRMFEIYVYSSISAIPFATM
GNKEWGQIGTNYIKGLFAIGLQGLFLMVCLGIYAVLVKTIQITDIHTSTFTILGYAVLLGLMMLKSGTLA
KSVLNAH
>gi|260687146|ref|YP_003218280.1| putative conjugal transfer protein [Clostridium difficile R20291]
MQNEKALRSQKRDLKKSNCKSKKDKGGILDLIFKKEPKRYTVEDTIPYLRLLKSGICQLDEKHFSKSIAF
QDINYQLALDEDRDLIFNQFANFLNSFDPSISIEFSYINQLGRNEEMKSAIQIPDKKDGFDDIRFEFREM
LKSQIVKGNNGLKKSKYVTFTVEADNLEQATSKLERLEIDILSSLKSMGVRAESLNGEERLKILHDVLNP
NKTFKFSYKDLKKRESTKTYIVPDEFNFTPSRYFKFGKFIGATSHFQILASELSDRMLSEFLDIDDNINI
SFHIRAIDQSEAIKMVKRKNTDIDKMKIEENKKAVRSGYDMDILPSDLITYGEDVKSLLKDLQTRDERMF
VVSIVFMNFARTVQKLDNTIAQISSIANKHNCKLKRLDHSQEQGLVSVLPLGVNKIEIDRGLTSSSTAVF
MPFTTEELFINSSNSLYYGLNALSHNLIMADRKKLKNPNGLILGTPGSGKSFSAKREMANAILVTDDDVI
ICDPEGEYGNLVRQFKGEVIKVSSKSKDYLNPLDINMNYGDGDAPLKDKANFIMSMLELVVGGSGLTAEE
KSVIDRCLPKIYEKYFEHPTPDNMPILQDLYDMLKGQEEKVGKKLATEMEIYVSGSLNVFNHRSNVDLNK
KLLCFDIKELGSQLKKIGMLVIQDQVWNKVSQNRGNKATRYYIDEFHLLLKDEQTASYSVEIWKRFRKWG
GIPTGITQNVKDLLMSKEIENIFDNTDFVLMLNQASGDREILARKLKISLPQLRYVTNSNEGEGLLFFGN
TIVPFIDKFPKDTILYQKMTTKPEEVR
>gi|260687147|ref|YP_003218281.1| hypothetical protein CDR20291_1791 [Clostridium difficile R20291]
MGKKLKKDFKERHKASLEREMFHSKTDTIPEESKLKHNDDYRGKIVHEKERFQDKVHEKTSKVSADNEKS
YGTSKRNEKYRTSDKGDVNSAIETGRSDYITEVKDGKIYDPLGKDLDNDGIIDRYDNDFRDSNYFESTYD
VEDNLSHKEKSLENSFKNHKTQKSRYKRKNYSESLYTRKKDDAPKGNKADDKKAGKDAVSGKVYSSLSKD
QKKKLKKDMVKVSALSGLAKGSETVRDYLSHGSDENQGVEAGEKTADTSSKLIHGIKKYSDKKRAKRGYD
LTNKDYKIRKRKSKLEFRDAKKELKKTDEYKRASAYKRFQKKNQVKAAISRENKSRLRDRIKEGLIGTLK
SSKDMIIRKAKGLMLIFIGIIILGTFVINFAGTGMTGFMNSTSSVLTTSYLSKPNVLSEINQKFSDMEGE
LQSEVDYVKENYPGYDEYILNNTEYIGHNVHELLSYITSRCGEVKSVSEVESILKELFESMYDLEYREEI
EIRYRTVTETYTDEDGNEYTESHEEPYEYKKLIVTLHKKEMDSIIRKVFANYPDNLKHYEALFLAQGNMR
EAFGNSDLISANGGIGGGKEYEASTEVQKKIVNAAYITPSPGAGWCAMWVSQVYQNAGLGYIGGNACDMY
RNYTFTSDRSKLKVGMLVAVESSSSGSSAGLTYGHVGIYIGDGKVIDNIGRIRVTTLDDWIATFCKHHPV
GFGFPPNVKK
>gi|260687148|ref|YP_003218282.1| putative cell surface protein [Clostridium difficile R20291]
MKTSLKKNNKFWTVALAVIVSISCILGLWTVVYAQEQKSEAPTKNEAVQTEVEVNVRYIFEDEKVFKEEK
IKAEKGQLIDSGDLPMLPDDMKFIDEFLFYEVKGDGKDEIIRKVAKMEVKDKETQTEEEKPKQDECTQTE
DKGTQTELSKDDISKIEKEAKELQDKLDKLNCELKDKDKLSDKQKNKIKDLEDEIDSLKEKMKKDKGNKD
LSEDMKKEIDKLTEKVKELEKKATETNKAPVTSQSVTPISPISGIKTSSGISPQTPQTSVSSTGKGSSDS
VSSGNTTKDTGKGKTEVKEKEKEVRYPNKLTAKAPANNSQDSSMGSASKSVNTNKGVASSPSKARASVTE
NKDNANKEYPIHHGDSSDNKETDQYSADARQFITFQTKNGKTFHLIINHDEDSENVMLLTEVSEDDLLNM
VEKKEAPKQEVVKEEPVKEEVKPEKKDEKSNLGTYIILLLVVGGALGAGYYFKVVKKKEDKELEALEEED
DDFFSESESEEEINDADEVEDEE
>gi|260687149|ref|YP_003218283.1| putative DNA topoisomerase [Clostridium difficile R20291]
MKLVIAEKPSVAISIAKVIGANKKKDGYYEGNGYRVSWCVGHLIQMANPDAYDEKYAKWNMADLPIIPSD
YKYEVAKATKKQFNILKKLMNDKEVDTVINACDAGREGESIFRLVYNQVNCKKKMKRLWISSMEDSAIKE
GFDNLTDGKDYDNLFESAQARAIADWLVGMNISRLYSCLYQQNYSVGRVQTPTLAMIVKRDDEIANYQKE
KYYTVELSMNGFTLSTDRIDDEVAAEQLISLVGDKIEITDVIQKEKITKPDLPFDLTTLQRECNKYFGYS
AKQTLDYTQSLYEKKLITYPRTDSRCLTEDMIVSTVNNILGKNDFDTERIKVVFNSKKVTDHHAIIPTIS
SVKEDVSELPLSEAKVYFLISDKFHASVGYPLIENTTKIVASFDGFEFTSSGKVIKDEGFSKYLKEYKSK
KSEDAVLPDVSVGDVLSVENKEVKEKFTQPPKHFTEDTLLKSMEIAGNDALEKGVEVERKGLGTPATRAG
IIENLIFKRFVERDKKNLIATHKGISLVTIVADTFKSAETTAKWEMELSDIAQGKSSKKEFLDAIENEIK
EAVLTYRK
>gi|260687150|ref|YP_003218284.1| hypothetical protein CDR20291_1794 [Clostridium difficile R20291]
MSKINVEGSEISIIAIDNRDYISLTDMVRNIENGSALIEKWLRNKNTIEFLGIWEEMYNTNFNSPEFEGI
KNEAGFNRFILSVKQWVEKTNSIGIVARAGRYGGTYAHKDIAFEFASWVSPYFKLYLIKEFERLKEEEQK
KLGWDIKRNLAKINYRIHTDAIKNKLVPDKLSKEKINFIYASEADILNVSLFGITAKEWRDENPDLKGNI
RDYADISQLVCLSNLENLNAVFINEGMSQSERLEKLNAIAIEQMKILSESESIKKLK
>gi|260687151|ref|YP_003218285.1| putative helicase [Clostridium difficile R20291]
MRINDFHNILELIKQDVLYNEAEYLKLLKVVGNNQRYDFRSQLSIYDKNPEATACAKFDYWRERFNRTVM
RGQKGIPILEDYGTYKKVDYIFDISQTVSKNRDVNEVNLWRFDKEAHQDVLKEMIKSEGYEESESTLENI
FSLSRLYGDEKIDTLMNELRVADEDRISFTKFVRDSVSYAVASRFKLDYPMDYELLRENFQRFDSISLMS
LGESVSDISGKIIDETIQKSKELELQKEVLIGKEAGYNKIKEELEEVEENVFRRDDQERNENERVLRNGE
YGRDNRKNQGEYAKQLGGTDGLYKEVSESDLRSDEAELPFTERGAEPLRDAFGSIQGEEADRTPDGYSET
GSRVYESREAKVDSSLEDRGREQSAVWGDDFSSQRNDHQGSSGDLKDNTDKGIIEAEKASFSLPENSYGQ
ISLTIPLTEKDIDTVLINGGNHDGGRLPVIAEFSKGKSIEELGEYLKDTFKGGNGFYIDEREVSSWYSDK
GIHLAYGTSAREDNTQILSWSDAASRINELLDRGEFATNVELLEAQDYERDRISESLWYLTHDLSEEGIE
QGYFNSFERGGGFPQETKRLSEALKNPEYLKETIKEYSRFLEGYKESRNVLRYHYHKVDSLYQKLQELEL
QRKEYSTNLTELPKVKLFITEDEVLESLSRGSGVDRGKERITKFFKENHTLQEKANFLKDEYGIGGHSHV
VSGAMGSDEWHDAKGFKLQKNDCNDVFLTWTSVAKHIDELLSKKLYFEEKETESTAEIEEVKEPQYYSKN
DPGNLMPDEILERVPEIYAQEDVDLADKQVHAAYIIPFRSNWTWYMTEYDRESGDAFGLVLGIEPEWGYF
NLEELKELNAQRLILEDFPKTFRELKDIELIKQMDEQELQFVFNGELSFEDKVELEAPEETEEATKRGTV
QATLFDYLKEREEVELNEKEDSLLEEFAVKAGDTVYFNHEEYKVREISKNEITGRYDLWLDPVRSGNHQI
PIVDFTDNEDLLNKISLERPNFIVGDEVKYKDKNHTITRFDDMRKNLNTVTVKDNTEYFGGMITSFDVIP
YRLESDLERVFENLTYKQPEQTTEETQIRKAEAHNFKITEETLPEKLSPSERLNNNLEAISMLNRVESGQ
RELDSTAQEVLARYVGWGGLSEVFDESKEGQWKEARAFLNENLSHAEYEAARESTLTSFYTPKTVIDGIY
KTLSDMGFKQGNILEPSMGIGNFIGNIPDEMNKSKFYGIELDSVSGRIGKLLYPESEVQIKGLEETSFSN
NFFDAVIGNIPFGEYKVNDREYNKNNFLIHDYFFAKSIDKVRNGGIIAFITSSGTMDKKDESVRRYLAAR
AEFLGAIRLPNDTFKGIAGTEVTSDIIFLKKRDSIRERDEDWIHLAEDENGLTYNKYFVDHPEQVLGTMR
EVSGRFGNTLACLPKENADLKELLTKASEEISKGSTYEEIELLDDEITSIPATDDVKNFSYTVIDDEVYY
RENSLFIKKEITDKNKEKIKDYLELNTALKDVIYKQKEDYSDDEVKKAQEKLNEVYDNFSKKHGFINNLS
NTRALKEDSNFPLVSSIEILDEEENVKAKGDIFSKRTITKAKVIDHVDTSLEALVLSVSEKGYVDFEYME
SLTGKDRPTLIEELRGEIYLNIREEQNFYRPLSFNLEDGDLPFACANGSNSYKYGYVTKDEYLSGNIRDK
IAIVDSYLAKLRQTERELPHLGFVENGKEKELISYEMNRLEYQKAELTKVLPKELEASEINVRLGATWIP
IKDIEKFIFETLKTPGYARWDIKVKFSNITSEWNVEGKSRDKGNDLAEMTFGTSRVNAYKLIEDALNLKE
TKVFDQIINPDGSKTSVLNKKETMLAGQKQELLKEEFKNWIFNDQERRNRLVKLYNERFNSIRNREYDGS
NLSFEGMNTEIDLRPHQRNAIARSLYGGNTLLAHVVGSGKTFEMVASAMESKRLGMCSKSLFVVPNHLTG
QIGREFMQLYPSANIMVADKKDFEPKNRKRFIGKIATGEYDAVVIGHTQFEKIPMSKEYQEKHIQDQINE
IVNYVEEYKHDRNQNFTVKQLEKTKKKLETRLEKLNDDFKKDDVITFEELGVDMLFVDEAHNYKNLYLYT
KMRNVAGIGQSEAFKSSDMFMKCRYMDEMTGGKGIVFATGTPVSNSMTELYTMQRYLQYESLKKNHLEHF
DSWASTFGETQSSFELSPEGTGYRVKTRFSKFYNLPELMSMFKEVADIQTADMLNLPTPEANYEVIKTEP
SEEQKEILKSLSERADDVRNRVVEPDVDNMLKITNDGKKLALDQRLINPLLPDNPDSKVNVCVKNVFAIW
DKTKENRSTQLLFSDMSTPKGDGEFNIYDDIREKLVAMGIPKEEIAFIHEANSDKQKDELFAKVRKGEVR
ILMGSTQKMGAGTNVQNKLIALHDLDVPWRPADLEQRAGRIVRQGNENEKVNIYRYVTENTFDAYLWQTI
ENKQKFISQIMTSKTPVRVAEDVDESSLNYAEIKALATGDPKIKEKMDLDNEVTKLKMLEANYKSNRYRL
EDKVAKNYPEEIARTEKLIEAVKKDISNVEPKAEGEEKFTSITIAGEKITDKKLAGERLLEAISKVKINE
SKVIGKYRNMDLEVSYNFFTNSHNFSLNGVAKHLGELGTSADGNITRLDNALEKMPEKLNMLEEKLISTK
EQLENAKEELKKPFEKADELKTKVLRLAELNKLLDMGEVEEKKNDNPLVEDVKRAIIDFCNREYEENHSY
DEFHTLYPDLKHIGIAYTNTPDERHGIQYELNLEEKTWTQYIDDTPIKTESFDYENKGENEALRNMKNEI
ELSTFSDLVYVDSEDLRVATGLDIDDEGNFYDPFAKDLDNDGIPDRYDSDFKDSDYFESTYDVEDNLHSK
EETTQKSDDKPSILGQIRAYQEESKTEEKQKIKEQEFLR
>gi|260687152|ref|YP_003218286.1| hypothetical protein CDR20291_1796 [Clostridium difficile R20291]
MKGDKNMDYKTMRDRVEDMLSDNHKDFVKAIISMEKGINDESALDKLYDAYMDNDSLNLLHEEFDYMIED
LRGQGQIKDLLYVREEKDNLINIVGNIVGEVDVIERENKNGETFKVANFSVVSKDDEGNKLYHNCSVYGE
KSDIPKDFKQGDFVKLFGQIRTSIDDNGKEHSNIRILSSKLLKAKEQMKGQEEKKESILGAIKKYQAEDK
EKPKEKKEASKEAER
>gi|260687153|ref|YP_003218287.1| putative conjugative transposon DNA recombination protein [Clostridium difficile R20291]
MSIRKLKIKNFKCFSDWFIVDFENGINILVGNNGTGKSTILEAINLVLTGTYHGKNIRNELTQYLFNKNI
VENYIREVNEGVNVEPPKIIIEAYFDAEMPSFLGDGNSEKTKDTPGICLSISFDEKYSNEYKMLCKNKIT
SLPIEYYEVSWMSFARENITARSIPIKSAMIDTTSYTPTSGSDIYISRIVKNLLDDNEIINISQAHRLMK
EQFSRDENIANINRKLTETSNNELTISVDFGTKTSWESSLVTQLNEIPYNNIGKGTQCIVKTQLALSDHK
IENKQIVLLEEPECHLSYSNLNILLDKVNESVKEKQIIVTTHSSFVSNKLGLENLILLNRGKTLRLGDLS
NETNLFFKRIAGYDTLRLLLSNKAILVEGDSDELIVQRAYMDSHNGKLPINDGIDIISVGISFLRFLEIA
KLLELRVSVITDNDGNIDALNRKYSDYLGDNCCENINIYFDDSTHEYNGSLENYNYNTLEPCIYRSNSMS
ILNEILNKSYEDPDDLLKYMKGHKTEVALKIFESDKAIEFPQYIKEGILI
>gi|260687154|ref|YP_003218288.1| putative conjugative transposon hypothetical protein [Clostridium difficile R20291]
MSGKLYIAAAGSGKTRKIIEDSLNTHKKILILTYTITNEQQIISRIKNKVGVIPNNITVSTWFSFLLKDG
IRPYQGSRFKERIEGIIFVNGQNNTYVKKTSNKYFAKDNRVYTDKLSECVVELNDKCNGKVFERISGMYD
CIYVDEVQDMVGYDLEILKCLIASRIEVIMVGDPRQCTYSTHSSKKYKKYSCGKIDEFLKNECRKLDVRI
DETTLNCTYRNNDIICKFANSLYPERTSTNFVRRAEDESDGVMIIDKADVEKYLQKFNAMQLRENKRTSV
NNEYPYYNFGESKGLEFQRVLIYPTQPMWDWIINNNTSLKEQSKARLYVAVTRAENSVVIVRKDARPCSL
PVVKL
>gi|260687155|ref|YP_003218289.1| hypothetical protein CDR20291_1799 [Clostridium difficile R20291]
MEISKKELRKISRKFRILASNVMNSYYGEQNANLEEMINYIEQTLLIKEYLHSLEYDVDGLDDLLNTISN
SYGRKVLNLGNDSNKRTYLLYRAFSFITGNNLPTYTFGWYYAGSNKYQDMAKAFGDRMVYPFVLEVENYM
KDISTDMGYDENNALYNINVNSSGVQVNIAEHGSTINADQENKFNTEEVIKAINNVEDLIKGMEDDNSKS
ILNQNLDNIKNEIKQKHPKKEVLTTCLKSMHFITTSVALIPDLALGIKMLASLIGISI
>gi|260687156|ref|YP_003218290.1| putative conjugative transposon mobilization protein [Clostridium difficile R20291]
MAITKIHPIKSTLNLAISYIVNGKKTDEQILVSTHKCHQETAHTQFLRTRNDVGTNGTVLARHLIQSFLP
GEASPKMAHQIGLELCKKILKDEYEFVLSTHIDKGHIHNHIIFNNVNMVTGKCYQSNKKSYHKIRYQSDK
LCKENNLSVIDEFYESYKRKYKTNGKSWYENEQSKRGTSWKSRLQFDIDRLIKQSKYWEEFLKKMAELGY
EIKYGKHIAFKPKDKTRFTRAKTIGEDYTEERLKERITENQSITTPPVKRRIGNIINMNANAKVKESKGY
EYWATKHNLNTMAESVIFIREHGINSIKQLDKYIQKSAEERQDLQDKMKEIDKDMQLLSDTMEQVHTVKK
YRAYYKEYKANPSDKAFFEEHKAEITHYEIALSKLKKSYSKLPNSKDILDKLNKLQEKKNTLIQEYSSTK
STMDELYQIRKNYGIYMGKEMER
>gi|260687157|ref|YP_003218291.1| hypothetical protein CDR20291_1801 [Clostridium difficile R20291]
MKKIVSRGACLLLTLCLSLSTVGCKKSNESNKIKEGQSISSEEAGMSTNEKDKNETFKPSDYTLKTKKEY
VYEYLGLKFKLSDKFKKYMDDKKIAMLDDQSPIDKELKYAILTFEKMTEEQKNAVIEKMGDGYKNWQNEL
ERIGTIGIFEKNTSEEKISKITKCDTHTKIGVSSDGKYDCYLSTNSGAESNLLDELKRTEIQIIDKKERP
KNGFVLSEKTDLENTEAFNKESVKDLRKLSTKDINGKDFTSKDFEKYDLTMVNVFATWCTACVKEIPDLV
EVQNEMKSKGVNIVGVVTDTVDDNGENKEAIEKSKLIHEKTKASYPFLMPDKTNFNGRLNGIQAMPETFF
VDSNGNIVGDTYSGAKSSKEWKQVIEKELEKIKNK
>gi|260687158|ref|YP_003218292.1| putative iron-sulfur-binding membrane protein [Clostridium difficile R20291]
MELDRIKNIINGSTKKDKYKIRDRFRHLFQSVWFLITNSYFEGFKTGKIYGGNLKKICVPGMNCYSCPGA
KGSCPIGSLQAVIGNSKYKISYYIVGILFFIGALVGRFVCGWLCPFGLIQDLLHKIPFFKKVETFKFDKH
LRKLKYIILLVFVIILPLFLVDILGQGSPYFCKLICPIGMLEGGLPLVLLNKSMRNAIGFLYYWKGIILI
VTLLLSIIIYRPFCKYICPLGAIYSIFNPISIFRYRLDKDKCINCGKCKKVCQMNIDPVENCNHLECIRC
GRCKNACPVDAISYGVRK
>gi|260687159|ref|YP_003218293.1| ABC transporter, permease protein [Clostridium difficile R20291]
MIKNAIAYITRKRNRTLIIFIILTIVLSCLYSCLTIMKSSNEIEKALYESSNSSISITKKDGKYFNVNQF
KDIEKLKEIEEKIIQYDGLAKLKDAKVVSGEQRINREDLSDEFKNVVSLEATNNTKRNILFSSGVFTIKE
GKNIGENDKNSIIVHEEFAKQNNLKLGDEVDLELLDIEKSGKIKSHKFKIIGIFSGKKQETYTGLSSDFS
ENMVFVDYSTSQEILNKSENNKIANKILMYSGSAESTDLALNKLKELKIDESKYFVEKDSNAFEESLESV
SGIKHIIKIMTYSIMLGGMVVLSLILILWLRERIYEIGIFLSIGTSKIQIIMQFIFELIFISIPSIISSL
FLGNVLLKVIVDGFINSEDSMISGGSLINNSSFMLNITTLGQSYLILISIIVLSVVFASSLILIKKPKEI
LSKIS
>gi|260687160|ref|YP_003218294.1| abc transporter, atp-binding protein [Clostridium difficile R20291]
MDILEIKNVAYSYANSKEKVLSGVNQKFELGKFYAIVGKSGTGKSTLLSLLAGLDKPQTGKILFKNEDIQ
KKGYSNHRKNNISLVFQNYNLIDYLSPIENIRLVNKSADESILFELGLDKKQIKRNVMKLSGGQQQRVAI
ARALVSDAPIILADEPTGNLDSVTAGEIINILKTLAKDRNKCVIVVTHSKEVADSADIILELSGKKLKKV
NKMNLEVE
>gi|260687161|ref|YP_003218295.1| ABC transporter, permease protein [Clostridium difficile R20291]
MIKNAFAYVTRKSLKSLIIILVILSMSTLSLISLSIKDATDRASKETFANITNSFSMEINRQVNPGTPRG
GGNVKGEDIKKIFQTDSIDSYVKRINSVADLVDYDIIETQETLANQSPERAKNFKRTVMLTGVNDSSKET
KFVSEAYKLVEGKHLENEDKNKILMHKDLAEKNNLKVGDKIKIKSNLFDADNEKGADETVEVEIKGLFDG
HNSGGVSAAQELYENTLITDVHTAAKVYGNTEDTAVYQDATFFVKGDKNLDSVIKDLGKLDINWREYNLI
KSSSNYPALQQSISGIYSISNKLFVGSLIFAGVVVSLLLFLWMNARKKEIAVLLSLGISKLEIFGQFLIE
MVFISIPAFVGSYFLAQYTADKLGNNILNKVTGDIAKQIARQSASSQLGGGAEAEGFNKTLSSLDINVLP
KFIIYVVIFMSLVLLVSLIISSFNILRRNPKELLIDNN
>gi|260687162|ref|YP_003218296.1| two-component system, response regulator [Clostridium difficile R20291]
MKILTVEDDNMIREGISEYLSEFGYTVIQAKDGREALSKFNSDINLVILDIQIPFINGLEVLKEIRKKSN
LPILILTAFSDEEYKIDAFTNLVDGYVEKPFSLPVLKARIDSLIKKNYGHLEKFEYNDLSVNFNSYTAKI
NGEEIDVNAKELEVLKCLLDNNGQVLTRMQIIDYVWKDSEETPYDRVIDVYIKELRKKLQLDCITTIRNV
GYKLERK
>gi|260687163|ref|YP_003218297.1| sensor protein [Clostridium difficile R20291]
MKKLKIFPKMFIQIFSVLGIIIILVHSLVFFIFPKTYLETRKEKIHNMANEISSNMNGKEIKYIEQTLEL
YSKSSEIKAFIKEKNNKNEIQIKDNINVNLESDSNSLIIEEREIKLNDGKKTNLQFVSTADMQKDAKDLS
LKFLPYSLLISILFSAIISLIYAKSIKNNIQEIKIVTDKMMKLDKKTRLKVSSNDEVGELKQQINDLYST
LLRTIDDLEFKNKEILKLEKLKYDFFKGASHELKTPLASLKIILENMKYNIGKYKERDIYINECIEIVDS
LTKNISQILSVHSIENLNNDEEYLKINDTLEDILKKYEILANQKKITVNNYILDENVYIGKTALKIILSN
LISNAVKYTDVNGVINIGIVNDWLYIENSYGNNKISNMDKIFDVKFDLNKENSNGLGLYIVSNILNNYNI
EYKALQDEEFFIFKIKIFS
>gi|260687164|ref|YP_003218298.1| putative sigma factor [Clostridium difficile R20291]
MAKEYYLYIRGQKVKVSEDIYIVYWREKEHEKYLEQVDRKNHLLFFSALDHDGHFTDNIVDESVDVEKIV
ETQMMIEAVRSAITRLNAEERDIIERLYFNDETVRSVAKLKSITHPALIKRRNKILEKLKKFIEEL
>gi|260687165|ref|YP_003218299.1| hypothetical protein CDR20291_1810 [Clostridium difficile R20291]
MHENKKNLLDGSLAQYNDTAVPKIPVFAGNDITSEVYYFKPNQVLNAHRHPNGEQIFVFLKGEGKMKLGE
HECDVKNGDTVFVPTGEWHEITNGSNEEMVAVQITKINAGAEYRG
>gi|260687166|ref|YP_003218300.1| hypothetical protein CDR20291_1811 [Clostridium difficile R20291]
MFKKIVAIASSIIVSTICLTGCDFNSNDKKDESSSSKNLDKVTIAEVTHSVFYAPQYAAITKGFFEDEGI
KIDLINTQGADKTMAALISGEANVGLMGPEASIYVYNQNKNDYAVNFAQLTKRDGSFLVARKKMPNFSYN
DLKGTEILGGRKGGVPLMTFEYVLKEKGLTIGENLKAGNVNVRTDVQFGVMAGAFAGGEGDFTTAFEPTA
TAMEKEGSGYIVTSIGKDSGEIPFTAYSTTRSYMKNNKDLIQRFTNAVYKGQLWVQQASSKEVAKAMQPF
FEDISLEDLTTVVDRYKSIDAWSQNPVLKEEGLKKLMTVMKEAKELDKEAPYKDIVNTEFANNAIKNIK
>gi|260687167|ref|YP_003218301.1| hypothetical protein CDR20291_1812 [Clostridium difficile R20291]
MKQNKYDDDRFFNKYSKMERSTNGLAGAGEWHVLKKMLPDFKGKRVLDLGCGFGWHCQYAVENGAISAVG
VDISEKMLKEARNKTQLDNINYICMPIEDINFPKDSFDVVISSLAFHYIQSFEDICKNISNCLSNKGNFV
FSVEHPIFTAYGSQEWYCDKDGNNLHWPVDRYFEEGVRKSNFLGEEVIKYHKTLTTYLNTLMKTGFEILE
IIEPQPEEKLLDTIPDMKDELRRPMMLLVSAKKR
>gi|260687168|ref|YP_003218302.1| putative regulatory protein [Clostridium difficile R20291]
MNNQQQEVYKKLDELSIPYEAVNHPPVYTIEEMEELKTLHMEFVVKNLFLRDAKGKEHFLVVLGKDKKAD
LKDIRQQIDSKPLSFASEERLQKYLKLTKGAVTPFGILNDKEAVVKVVFDKDLLKMDKIGIHPNDNTATV
FLKFEDMKKLIEENGNEIYYVEV
>gi|260687169|ref|YP_003218303.1| putative plasmid-related protein [Clostridium difficile R20291]
MSTDKVVGIIDEETAELAGIEYTGKIYASSGVIKHIKKKHRCQLSKDIFNDIIDTIKVVLKSPEYIGSHP
KKPGKSVEFIKKIDNYILVATELDTKKGYLYVSSMYAIKEAKLESRVNNGRVKQYDG
>gi|260687170|ref|YP_003218304.1| hypothetical protein CDR20291_1815 [Clostridium difficile R20291]
MNLSKKIEDKRKAKQRAEKVKKAKIATAGVVLGAVTGAVSGVLLAPKSGKETREDIKDASQQIAEKINMK
TVDVKGKVSEKLEDKKGNFIESKKKIKKYIDNKKSVENSSEEDKIIDIVEPVSVTEE
>gi|260687171|ref|YP_003218305.1| putative lipoprotein [Clostridium difficile R20291]
MLLRNNMDNTITINISIIYVLLAILACIALVYLIIVLVKLHKILNNVGTMLNENTQNINTTLNNLPNVVE
TFGEVGENMKDVTEVVTEVTADFLVTKDSVKSNMDVIVDILTIIKNIFLDKK
>gi|260687172|ref|YP_003218306.1| hypothetical protein CDR20291_1817 [Clostridium difficile R20291]
MIRTKVVELIATVCRENKPHKWVDENYTPYDKSGKVELMSIEDLNELISSSGRADFLYSSRLQKLLNEVY
INQSRASYISGCGLFWSSYWDILEEKFEEWLYNSYIFFDEDDEYLEGMEDFELECKDVLMDVIETTSIDI
YVQMIKRNITNY
>gi|260687173|ref|YP_003218307.1| putative phage-related cell wall hydrolase (endolysin) [Clostridium difficile R20291]
MKVVIIPGHTLIGKGTGAVGYINESKETRILNDLIVKWLKIGGATVYTGRVDESSNHLADQCAIANKQET
DLAVQIHFNSNATTSTPVGTETIYKTNNGKTYAERVNTRLATVFKDRGAKSDVRGLYWLNHTIAPAILIE
VCFVDSKADTDYYVNNKDKVAKLIAEGILNKSISNSQGGGENKVYENVIVYTGDADKVAAQILHWQLKDS
LIIEASSYKQGLGKKVYVVGGEANKLVKGDVVINGADRYETVKLALQEIDKL
>gi|260687174|ref|YP_003218308.1| putative phage-related deoxycytidylate deaminase (putative late competence protein) [Clostridium difficile R20291]
MEVYDLNKKLENRCSWQEYFMRLCETVAERGTCDRAYVGAIIVNSENRIVSTGYNGSISGDKHCSEVGHE
MRDGHCIRTIHAEQNALYYCAKEGISVKDCSIYVTHFPCLNCTKAIIQAGIKHIYYRTGYRIDEYAIKLL
QSSNVLYTKL
>gi|260687175|ref|YP_003218309.1| hypothetical protein CDR20291_1820 [Clostridium difficile R20291]
MYMQHVINLSTIYILYKKIFEGRLKMGILEGAAMIREIAIKIAKEKGITEQKAWPEAVKEFKEKYELVL
>gi|260687176|ref|YP_003218310.1| putative phage repressor [Clostridium difficile R20291]
MLSENIKTIRKSKGLSQQELAIKLNVVRQTISKWEQGLSVPDSDMLISISEVLETPVSTLLGETIVESEV
DSLKVISEKLEIINLQLAQRKNMRRKMFHWLFILLCAVIVIVFVVLGGLNSPYLDWNYTDPETAVFGVAF
HAFEWLFVRLVPIVLIGAIIGIFLTRKKI
>gi|260687177|ref|YP_003218311.1| putative lipoprotein signal peptidase [Clostridium difficile R20291]
MQGGVNIRQIKSFVFPVISLIFLDQISKVLIGLFLMDFEIDIIGKFLRFNPVQNTKLSLCYLTNGAQK
>gi|260687178|ref|YP_003218312.1| ABC transporter, permease protein [Clostridium difficile R20291]
MRLNKRSEGYINYVKGVKREKRNVLFYQLLILIGFIVIWELLADLNVINTFLFSKPSDIYNLFIQYAFSG
QLFKHIGISVYETVLGLVIGTVLGILVAIALWWSEKLSKILDPFLVVLNALPKTALAPIIIVWVGAGIEG
IVVTAVTISVVVTILSAYNYFMNIDEEKIKMLKSFGATKSQILFKLILPANTGNLINLTKINIGMAWVGV
IVGEFLVSRYGIGYLIVYGSQVFKLDLVMMGVFVLAICAWAMYAVVNIIEKIYNSR
>gi|260687179|ref|YP_003218313.1| site-specific recombinases [Clostridium difficile R20291]
MKAAIYSRKSRFTGKGDSIENQIQLCIDYAKSIGVKDFLIYEDEGFSGSNIDRPQFKKMMQDAKDKKFSY
LVCYRLDRISRNVSDFSTLIEKLNELNISFISIKEQFDTSTPMGRAMMFISSVFAQLERETIAERIKDNM
YELARSGRWLGGNTPHGFNSEKITFLDENLKERSMYKLQVNDEQMEIVKLIYNKYLELRSLSKLYKYVYN
NGIRGPRGGKFDPSSLSRILRNPAYVKANDEILDYLKNSGMDVVGTPDRKCGILTYAKNTSNSIAAIAKH
HGVIEPEIWLEVQNQLDKNRDKTPRISTGKTALLSGLIKCGKCGSNMRITYKGKKTDKDLKYYYICGTKK
TLGSDSCNCKNLNGPLVESLVIDKIKNCKEESIISAFNSNNIKTDNVFNIFKSETNLLKNQILDKERLIK
NLVIELAKNTGSTASDYIVSQIESLNNEISILKDKINILESSNINISSDSINIDIIVSNLKRFNDEVDNA
SLDDKRLLLSTIINSIIWDSSLGNLNIVYMGAEVDNSVSLSN
>gi|260687180|ref|YP_003218314.1| hypothetical protein CDR20291_1827 [Clostridium difficile R20291]
MHMEINVIEIFPKDKAKLNKIEMDKASWFVNIISKKYPKEALNEAFSILEKELNISKANT
>gi|260687181|ref|YP_003218315.1| putative ethanolamine/propanediol utilization propanol dehydrogenase [Clostridium difficile R20291]
MNNFEIKTRIKFGEGSLKVLQELKNKNVLIITDPFMVKSKTIDKITSNLINSTYQVFEEIVPDPPIEVVV
AGIEAFKSINPDVIIALGGGSAIDAAKSIMDFSKKILKINEVEFIAIPTTSGTGSEVTSFAVITDSQKKC
KYPLVSDDLLPDMAILDPELVKTVPNFITADTGMDVLTHAIEAYVSTNSNDFSDALAEKSIKLVFKYLIK
AYKDGNDIEAREKMHNASCLAGMAFNQASLGINHSIAHVLGGKFHIPHGRTNSILLPHVIEYNSSIVGYT
NTTYSDTAKKYAQIAELVGLGSANIRISVRNLVNEIKKLQKEMNMPTKLTQCKLSLEDITNEEREIAKLA
IKDTCTLTNPKVPTEDDIINILNNIK
>gi|260687182|ref|YP_003218316.1| putative ethanolamine/propanediol utilization protein [Clostridium difficile R20291]
MTEESKQRVIQEYVPGKQVTLAHIIANPNEDIYKKLGLVLDKRDAIGILTITPSEASIIAADVATKASNV
SLGFIDRFSGSVVISGDVSSVESALNDVLEVLGNMLNFSSTKITRT
>gi|260687183|ref|YP_003218317.1| putative ethanolamine/propanediol utilization protein [Clostridium difficile R20291]
MKNIIFMGKTGSGKTTLCQKLDQLELKYKKTQSVELYNNAIDTPGEYMENRNLYNALITTSADAKIIAIV
YDATQEENYIAPGFASMFCKDVIGIITKINKATENEVNIAYERLSLAGASQIFKIDTVDDIGLEKLFKYL
EKSKNIDEV
>gi|260687184|ref|YP_003218318.1| two-component response regulator [Clostridium difficile R20291]
MGKKILLVDDEPLLRMDTKDILESHGYEIIGEASDGFEAVEMCKKHKPDLVIMDIEMPILDGIKAGKIIC
KENLAGGVLLLTSFEDKEYVEKAKSIGAYGYLVKTASEKSLIPTIEMCLNKVNEFEKMKKDLEKVNSKLN
ERKLVERAKGILIREFKISEDEAYTRIRKLSMDKRTTMMEIAKMIIIGYDD
>gi|260687185|ref|YP_003218319.1| two-component sensor histidine kinase [Clostridium difficile R20291]
MTNTIKKISTAQTYLNNNEIEKIIEVSKSLDLMASFYEADVFIDVLSKFDDEAIVVAHGRPKEKSMYCEN
VIGKKALIENEPGVIKCLKTGERVRDIKALTQEYKLVKQNIQPITLDDKVLAVLIVEKDISSEVKNEFNA
SEDEENKNLHQFIKLIGNNDFLVDNLNSAILIFDKNGKLKIKNRIATEIYKNLGFGYDIQDMHYNDLDIE
TNTFENILMDENYDETNEVSIGNMFFKIKTIYIKDDEFKVCKIVQDISDLKRKEEELVLKTVAIREAHHR
VKNNLHTVISIIKKQSRLSQNDEVKQCLDNIINRVFAILSTHYLLSKEVDNNISIREGINLLVSNIQGGY
LFSKDIDIRITGEDFKISGEKATAILLVINEILQNCYDHAFSDREHGTIQILINKDNDYRNIAIIDDGIG
FDSNNINKNSLGTYIIDSYITQMLKGNIERKSNENGTEVLITIPTQINI
>gi|260687186|ref|YP_003218320.1| putative ethanolamine/propanediol utilisation protein [Clostridium difficile R20291]
MREELLSVGIDIGTSTTQLIFSKLIVENTESNFSVPRISIVDKEIIYKSKVYFTPLISNNEINGQQIKDI
VENEYKKANISKEDIHTGAVIITGETARKENANDVLHTLSGFAGDFVVATAGPDLESIISGKGAGAHIYS
KEHSTTIVNIDIGGGTSNIASFKRGEVTDTGCLDIGGRLVKIDKISKKITYISPKIDKIIKDNNLNLQVG
TMATVENTKPIVDIMVDLLMESIGLKKQTPLFDFIITNKSISIDENIKNVSFSGGVADYIYYDGEIKDYF
EYGDLGILLGQTIKNCEYLKKVNVVKSMETIRATVVGAGSHTTEVSGSTITYTSEKFPLKNLPVLKLSVD
EETGTSKQISEAIKNKLNWFKLENDLQKVAIAMIGKKNPTFLDIQEYAKGFVDGMQQIIENDLPFIVIVE
NDMAKVLGQAIYALLNYEKEIVCIDSVKVENGDYIDIGKPIVEGKVLPVVIKTLVFN
>gi|260687187|ref|YP_003218321.1| putative ethanolamine/propanediol ammonia-lyase heavy chain [Clostridium difficile R20291]
MILNTKLFGRTYQFKGLYDVMAKANEEKSGDKLAGLAAESAEERIAAKVVLSHIKLEDIRNNPAVAYEED
EVTRIIQDAVNEKVYEEIKNWTVSELREWLLDSNTTSLDIRRISRGLTSEMIAAVAKLMSNMDLVYAAKK
IKVTAHCNTTIGEQGTLSARLQPNHPTDDPDGILASLLEGLTFGIGDAVLGLNPVDDSVESVTKVLKRFE
EVKQKYQIPTQTCVLAHVTTQMEAIRNGAPADLIFQSIAGSEKGNEAFGFNGDTIEEARQLALKHGTATG
PNVMYFETGQGSELSSEAHHGIDQVTMEARCYGFAKKYEPFLVNTVVGFIGPEYLYDAREVVRAGLEDHF
MGKLHGLPMGVDVCYTNHMKADQNDMENLAILLTTAGCTYFMGIPHGDDVMLNYQTTGYHETASLREMFG
LTAIKEFDAWMEKMGFYKDGKLTELAGDASVLLG
>gi|260687188|ref|YP_003218322.1| putative ethanolamine/propanediol ammonia-lyase light chain [Clostridium difficile R20291]
MNEKDLKALVEQLVGQMVGELDTNVVSETVKKTTEVVVDNNAFIDDITEVDIRKQLLVKNPKDAEAYLDM
KAKTPARLGIGRAGTRYKTETVLRFRADHAAAQDAVFSYVDEEFIKENNMFAVETLCKDKDEYLTRPDLG
RKFSQETINNIKSKFGTNQKVLILVGDGLSSAAIEANLKDCVPAIKQGLKMYGIDSSEILFVKHCRVGAM
DHLGEELGCEVICMLVGERPGLVTAESMSAYIAYKPYIGMAEAKRTVISNIHKGGTTAVEAGAHIAELIK
TMLDKKASGIDLK
>gi|260687189|ref|YP_003218323.1| putative ethanolamine/propanediol utilization protein [Clostridium difficile R20291]
MKNDVIRPNILGIKIISNISPEMAQKLELKSHHKSLGLITADCDDVTYTALDEATKASEVDVVYAKSMYA
GAANASTKLAGEVLGIIAGPSPAEVRSGLNAVVDFLEYGATFISANDDDSIAYYAHCVSRTGTYLSEIAG
IREGEALAYLVAPPLEAMYALDAAMKAADVKMCELFAPPTETNFGGALLTGSQSACKAACDAFAEAVKSV
ADNPTGF
>gi|260687190|ref|YP_003218324.1| putative ethanolamine/propanediol utilisation protein [Clostridium difficile R20291]
MDAIGLIEVIGYVAAIEASDACLKSANVNIVRIDKVGAGIVTLTICGDVGAVKAALEAGEIAASRVGTLR
TSHIIPRIHNEVTNALFKTKEPKVCEVSEDKEKNFEITLEITDNVSKNLSEKENVILDVNENSGDTENLY
SDIDKTNKKIETVDDSLTEANEEKIENTNDKEVLEQVKIENSDFDRDDLSKNSVKKLKAMAKKLDSSITY
KDLNVLKKEELINLVKKLSRRDR
>gi|260687191|ref|YP_003218325.1| putative ethanolamine/propanediol utilisation aldehyde-alcohol dehydrogenase [Clostridium difficile R20291]
MTLLDKDLVSIQEVRTLVRRSKVAQEKLSKMSQEQIDKIVKAVVDAAFNNATKLAKMANEETGFGKWEDK
VIKNTFASMGVYETLKNTKTIGIIGEDKEANTIDIATPVGVVAGLIPSTNPTSTVIYKTIISLKAGNTIV
FSPHPNAKNCILETVNIISEAAIKAGAPEDSILCITNPSIVGTNELMKHKDTNLILATGGEAMVRAAYSS
GTPAIGVGPGNGPAFIDKSANVKLAIKRIIDSKTFDNGVICASEQSIVIEKSMEETVLKELKNQGAYVLN
EEESERLAKFILRANGTMNPQIVGKSVEVIANLADLTNIPKNTKVLVARENKVGHNVAYSREKLTPILAF
YVEENVEAIMNRCREILLNEGAGHTFSMHVNDEELVKRFALNMPVSRILVNTPSALGGIGASTNLVPALT
LGCGAIGGSSTSNNIGPLDLINVKRVAYGIKEIEELGRDKSQVEKSMFDSMDKEELINLLVQKLVKELA
>gi|260687192|ref|YP_003218326.1| putative ethanolamine/propanediol utilization protein [Clostridium difficile R20291]
MASANALGMIETKGLVGAIEAADAMVKAANVQLVGKEQVGGGLVTVMVRGDVGAVKAATDAGAAAAERVG
ELISVHVIPRPHFEVDAILPKVSAE
>gi|260687193|ref|YP_003218327.1| putative ethanolamine/propanediol utilization cobalamin adenosyltransferase [Clostridium difficile R20291]
MGVLTENEVKRKIGKNKNNITEFYIEKGQIITPSAKSYLAERSIELKYVDKLSDVNNEPKEVVKEVVKEK
KYKYTTVFGAKLDEKPEHMTQLNGNLLVFKDHKRIILRGKIDSLESEILKVQILCQKLDMPKLVKELQEV
LDFVRNIMRCEVLDEKLEDFKLLGLTPQELREQSHYPKKYFGIGHEFPSYEMGEVVVAINSIRSNTREVE
LAAYEAFKGEYGNVHREDLIKALNRLSSVFWIMIYKVRTNKYK
>gi|260687194|ref|YP_003218328.1| putative propanediol/ethanolamine utilization protein [Clostridium difficile R20291]
MENLLNEIVEEVITRVKKEAFIEVEASGRHVHLSREDVDKLFGEGYTLTKLKDLSQPGQYACKERVTITG
PKGSIKNVVVLGPCRNETQVEISLTDGSTLGLKAPIKQSGDLEGTLSIKISTQYGEVELDKGLMVAKRHI
HMTPKDAEKFNVCDKEIVEAKVMGQRPLTFDDVVIRVSDSFKTYMHIDYDEANACGYSKGTVAKIIKKA
>gi|260687195|ref|YP_003218329.1| putative ethanolamine utilization/propanediol hypothetical protein [Clostridium difficile R20291]
MNYDNLVDLITEEIYKKINSNEIKISNKPKAVIVFEQDNNKFNLLKDEFEILEFDKSIRECEIVIVSRLC
MRGLSNIALGNSTSDEERFILKMIMKGKKVYVLDEGIEYKKYKDTAPKALYKKFMSFEDEICKFGVEIIK
DLNVITKNKLNIKKELESTRGSKKEDTKVLDKDVLNLTSVESVKIDNEFSLDLRNKKLISEADLRKPTIN
GVKNILVNKKSIITPLAVDFMRIHHLKLKKL
>gi|260687196|ref|YP_003218330.1| putative ethanolamine/propanediol utilization protein [Clostridium difficile R20291]
MDIGKVVGNVWATRKDEKLCGQKLLVVKILKTKDTYKEGFMVAADNAGAGNGDLVLISKGSSARESIEKS
HVPVDATIVGVVDSFEVFDE
>gi|260687197|ref|YP_003218331.1| putative ethanolamine/propanediol utilization protein [Clostridium difficile R20291]
MNKSIGAIEFKSIAKGIEVSNEMIKKSSVDVLYLKSICPGKFLIIVGGETSYINECVDYGIKLGEGYIVD
NFVINAISQEILDGFKNKYQKLDSIVSIGVVESSKVCAGIKMLDKTLKSGDLVLVKLQLSFAIGGKLVYV
VAGDLSSLEYALKESENVVREKEVIYKTVIPSVDSQIIKSLIK
>gi|260687198|ref|YP_003218332.1| putative ethanolamine/propanediol transporter [Clostridium difficile R20291]
MGGIMSINEIIIYVMVVFMVLGAIDKCIGNKFGLGEQFEEGIMAMGSLAVAMVGVICLAPVLADVLRPIV
VPVFNILGADPAMFAGSLLANDMGGAPLALELAKDPNSGLFGGLIVGAMMGPTIVFIIPVALGIIEKEDQ
KFLATGILAGIITIPIGAFVGGLVAGFEVMMVLRNLVPIIIFAVVIALGLLKFENAMIKGFTYFGKGVVI
VITLGLAAAIVEALTGIVVIPGMKPISEGIEIVGDIAIVLAGAFPLVFVITKVFNKPLMALGKVLGMNDV
SAAGLVASLANCIPMFGMMKDMDNRGKIINVAFSVSAAFVFGDHLGFTAGFNSNMITPMIVAKLVGGITA
VLLAMVIANKTLRKENV
>gi|260687199|ref|YP_003218333.1| putative ethanolamine/propanediol utilization protein [Clostridium difficile R20291]
MDISNIDKNLIETLVRQIIEEKISGTKDTVDFVRNKDISGITSIKLPTVKVSESDRLDTGNPSDVVYTKD
LFTLEESPRLGCGMMEMKETTFDWTLNYDEIDYVIDGTLDIIIDGRKVSASSGELIFIPKGSKIQFSVPD
YARFIYVTYPADWASQN
>gi|260687200|ref|YP_003218334.1| possible transcriptional regulator [Clostridium difficile R20291]
MHRNKWLKRRRYMEEIVKKEQASMNDIFLYLKAKSNSLYKFVILYNEFINKPKDYGTGELINMVEVHMLT
AIEENPGISPTQLAKIWNRTKGAISQTISKLEKKGYITKEKKEGNAKTILLYPTTSGVELSKAHKLYDTI
DVTRTFEYLIKECTLEEIDSFYKVIDLFINLLEESPQENNDSEKV
>gi|260687201|ref|YP_003218335.1| putative peptidase [Clostridium difficile R20291]
MNLKQLSEKYEEYVIQMRREFHKYPELSFKEIRTTQRIREELQKIGVPFVSIEPNIVIATIQGKNEGKTI
AIRGDIDALPMQEDSDVEYKSEYDGIMHSCGHDAHGAMLLGLAHMLNDIRKDLKGRVLLVFQAAEEVGGG
HKEIIQYFKENGGPDRLIATHVWSDIEAGKISVEPGPRMAGGSGWRIDITGRGGHGSRPDQSIDPIKPAC
DIVLKVSSIPVNHISVLEQCVVHACAIHGGTTIGNVIPNNAEVIGGYRYFTEESGKKVFDIIKQMSNGVG
QAYGVDVKVTHTGGIGPVINDEEAVKMSKEIVSNIDGLELDSYEPICASDCYGEILKEYSGFYCYLGVGN
KEKGIIYAQHHPKYNIDEDTLKLGCEFMAKYAVEFLNKNNN
>gi|260687202|ref|YP_003218336.1| putative aminobenzoyl-glutamate transport protein [Clostridium difficile R20291]
MGGMKMQGALKENKKKSGGGFLGWIERVGNKMPHPLALFTYITLIVVALSAIASFLGFSATSPATGKLIK
VMNLISAKGLVLFMQEFVKNFQNFPVLGVVLVMAVATGVCEKTGFFSTAIKMSLSKVKGNAVVFIIAFIG
VFANQAGDAAFVLVPTLAGAIFYGLNRNPLAGIFCGFASVGGGFATAVIPGGWDVTLTPITVSAAQTIQP
AFDMTLLASYYALFVSAFIVATVSTIVTVKFIEPKLGKYTGKPEGIDDNQGFEVTKEQAKAAKLAGFTVL
AYVALLIALCIPANSFLRSPEGSLIFGAPLMSCLQFFIVILFFLPGIVYGMRVGKIKTVKDLNDILCQSM
AAMAPFIVLAIVIGQFLTLFSVSNLAQVLAIKGGALLNSLPLPPQVIILLFLVLVAFINIFVISGSTKWM
IFGPVFVPMLMQLNIHPAFTQFVYRLGDSVTNHLSPLNAFFIILLATVQKYDKNAGMGTIFSAMIPYTIG
YFVVLAVLVVVWMTIGIPVGIGGQVWL
>gi|260687203|ref|YP_003218337.1| putative aminotransferase [Clostridium difficile R20291]
METTEIRYNFDEVIDRSGTNCLKYDLKSQFMPESPEDALPLWVADMDFACAPEIINAMHERIDRKIFGYS
SQQTDDYYEAVCGWFKRRFDWKIEKENIFFSPGVVPALGFFIQILTQKGDGIIIEKPVYYPFEDKITNNE
RKVVNSPLKFEDGHYSMDYDGFEELAKDENNKVFILCSPHNPVGRVWKKEELRKIVDICKKYDLWIISDE
IHCDIIRKSEKHIPLEVACPDYKDRIITCTAPSKSFNLAGMQLSNIVINNKELQEKWMLETDSKLAIFLP
NPFAIVATKVAYNDCEDWMNQVNEYIDGNIKYVEDFVNEYMPKVKIIKSQGTYLIWLDFRGYGLDAKQLE
YVMLNKAKVLLDEGYIFGEEGAGFERINVASPRTIIEECMNRIKCAFEGL
>gi|260687204|ref|YP_003218338.1| hypothetical protein CDR20291_1851 [Clostridium difficile R20291]
MSNIITNLIESVFTNPITILFLLAITVYSVFKIIENNRVYSFVSSKLDEINRDYKTSEFYKKVRDDYYTY
SKENPYADVNITSFIEEVVSDLKHNNLPLLEKIRSIKNSSSISILLGVLGTFVGLSTMLLCVDTKDIINS
LPSTISSMQTAFTTSIFGVVFSLIIGYFTKIKDCEHVLIQIMLKSENLLTSEITHFKSERMDLKVEEVKN
TIKQISKSIEAIEKFDKISKDLNDFNDEFISGIEALKSLLEGSQSSIKTFDQSVRKLDKQFNILNIKFVK
LFDKYDNQDNINKEILFDIKESSKNIYNATESQFKIRDYIKNINAGFALYERSAQDLLTKLMTHENKISQ
NQKILLDEKFTLDDSIKNLSSIIENFSNDLQVKLDMMFENSLDIQDKLDVMFNNSFMNDEVPLDSEELFK
DDVNNVFNPFSEEIYEIEDKEIKVIGEDELNE
>gi|260687205|ref|YP_003218339.1| hypothetical protein CDR20291_1852 [Clostridium difficile R20291]
MNNKYRRTVNREFEKSSFWPTFTDLLSTVLMVVILILFSSESISGSVEQDLAKNVNASVEETFKKSKIPV
KVDKSNGQVTFGEKTMFDVDSDVLKPEAKEMLKMFVPKYIETIYKDYGDYISKIVIEGHTDDVGSYIYNL
DLSQRRAYSVAKFIVGDEIGDYKYKDKVTKHIIAIGRSKAELIKNGDNSVNRDASRRVELKYEININQNK
>gi|260687206|ref|YP_003218340.1| hypothetical protein CDR20291_1853 [Clostridium difficile R20291]
MIEISIKNKKNSKIKTLILLLIVSISIYLTGCTTSDNGNNQSNNNDSLSSSISSDKNVKIHFIDTGNSDA
ILIQDGKTFTLIDGGDNDDEGLMVDYLNNQGVKDIKYLIATHSHADHLGGLDSVVKNFNIENVFVSNGSA
ETKSYRDFINALANKGLSPSVPLENNKFYLEDSYFEVLNTNGGDTTNEQSLVLVYTNGNDKVLFTGDAEE
GTEKEILPKLEKVDLLKVAHHGSRSSSSQEFLDKVNPEYAVLLVGKGNSYGHPHQETMNKLKKMGVKVHR
SDECSDIIFESTGDGVFTSCKDGSYNKGVREDGNSGKSNSNTSKNDSFKNKQNTFNSEEIVYFTPKGKSY
HSIKNCSGLSRSKKILSGTIEESKKNDPCDICYGK
>gi|260687207|ref|YP_003218341.1| SOS regulatory protein [Clostridium difficile R20291]
MYGNKNKICLEMSDVMYLDLTEKQVLILEFIKSQITLKGYPPAVREICTAVGLRSTSTVHSHLNKLEKLG
YIRKDPTKPRAIEVLERSKVNDVSGANQEIIELPLVGQITAGEPILAQQNIEEYIPFPASLVKGSNNFVL
RVKGESMINAGILDEDYVVVDKKNTALNSQIVVALINGESATVKRFFKEGNLIRLQPENDFMEPIMLNDS
EVEIVGIVTGVFRVIK
>gi|260687208|ref|YP_003218342.1| putative tyrosine recombinase [Clostridium difficile R20291]
MNNDKKIIKVHNKSDKPDNIVIKENELIEKCLLLENKLPVFMKDYFIYLKGSVAVSTRLAYLEDINFFCS
YLIETKELTNADCVKDITEDDFNTIKSRDINLFLGDYCSRYYKNTEKNTLIFENNNRALARKKSSISTLF
KFLYRNSQIDNNITDGFNPIKLPKPQPDAIKRLEIDEVAKMLESVETGEGLTEKEKVYWRKTKLRDKAIL
ALFVTYGLRLNELRELNISSFNFSRGEFKIYRKRGKEVLMPINHTCEHVIKDYLQNERTRDELLNDEEKD
ALFLSLQNKRITAKAIRTLVKKYTSIPLDTTRDNGYSPHKLRATAATSLIQTGFSIYDVQNLLDHDNVTT
TQLYAAHKKNVKRDIVKNFEWIEDD
>gi|260687209|ref|YP_003218343.1| hypothetical protein CDR20291_1856 [Clostridium difficile R20291]
MIYIIEILKISVINIFCFIGIFIVFGLIFSITENLNNKFIFSSFGKTGIIVTGAIGTFVHELSHLIMCLI
FMHKINSVKFFRPIESKNDGILGYVSHSYKKDNLYQSIGNFFIGIAPIIGGTIMIILIFKILLPDSYMKV
TQNIDLKLYVSMINNLNINGFIHIILGDISNFIRIMLLTPSVYSLKYFIFMFLMYSISTHMSLSSADLKN
SLNGLSFIVIVIFVISSITYLFGFDNLNISSLIVKYNIFISFFMAIGFIFSIVTLIISYILSLVSPFKNF
S
>gi|260687210|ref|YP_003218344.1| hypothetical protein CDR20291_1857 [Clostridium difficile R20291]
MKLKLLVEEYAVCRLNNDSKIPTWIDTEKFYSITRTDDELSVVCLNNNIPSDVKSEKEWRILKILGPLDF
SLVGILSKLSSLLADNKISIFAISTYDTDYILVKEKDIEDACKILSCNGYEVE
>gi|260687211|ref|YP_003218345.1| stage V sporulation protein S [Clostridium difficile R20291]
MEVLKVSSKSNPNSVAGALAGVLRERGVAEIQAIGAGALNQAIKSIAIARGFVAPSGMDLVCIPAFTDIE
IEGDKKTAIKLIIEPR
>gi|260687212|ref|YP_003218346.1| acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [Clostridium difficile R20291]
MIENNSEKIKVLENDIKQLITISKANNIDLSDKINSLNEKLEKLKEDAFSHLSAYEKVTLSRDIKRPTTL
EYIEHICSNFLELHGDRLFKDDPSMVGGIGQIGKFNVTIVGHQKGRDTKENIKRNFGMPHPEGYRKALRL
MKQAEKFNRPIITFIDTSGAFCGLEAEERGQGEAIARNLLEMSKLSVPVITFVIGEGGSGGALGIGVGND
VCMLEHSVYSVISPEGLSSILFKDSSKAKEACDVMKLTSNDLYDLKIIDKIIKEPLGGAQKDVEAVSKEI
KAYILERLNHYKDMDKEEIIAQRYKKFRNIGKCL
>gi|260687213|ref|YP_003218347.1| acetyl-coenzyme A carboxylase carboxyl transferase subunit beta [Clostridium difficile R20291]
MIKKFLSSKESKYVTISLDDNFKKNSVDDKFWTYCKGCDSHVFRKDIEENSFVCPKCSRHYGLRARKRIN
LLIDKGTFMEFNSDVEFQNPLNFPKYKEKVDSYKEKTKESEAVVTGYGRINGIKTVICVMNPDFMMGSMG
SIVGEKITYSIEYAAENNLPIIICSASGGARMQEGMVSLMQMAKTSQALSKLEEKSLPYISVLTDPTTGG
VTASFAMLGDIIISEPNTLIGFAGPRVIEQTINQKLPEGFQTSEFLLEKGFIDMIVDRRKMKELLYQILA
MHKK
>gi|260687214|ref|YP_003218348.1| biotin carboxylase (acetyl-CoA carboxylase subunit A) [Clostridium difficile R20291]
MIKKILVANRGDIAVRIIRTCKELGIKTVAIYSEIDKDCFHRYIADESICIGPNNISKSYNNIENIIYLA
LKLKCDAIHPGFGFLSENPEFAKQCEDNNIIFIGPTREQMILMGDKSRARETMMELNIPVVPGSESVLKT
KEEALEVAREIGYPVMIKASSGGGGKGMRIVRKEEELFSNFDMASSEALAAFSNSDLYMEKFIENPRHIE
VQVFGDKHSNAIHLGDRDCSMQRRNQKVIEESLSPYLSDEERQKLHKIAVDIVKGVGYIGAGTIEFIVDK
DKNFYFIEMNTRIQVEHPVTEMVTNLDLIKLQISIANGDKIPFKQEDITFRGHAIECRINAEDSSKNFAP
SPGKIESLNLPGGFGVRFDTFVYAGYTIPPLYDSMIGKLICWAETREECISRIYRALDEIIVEGINTNVE
FQKALVTSEEFREDTHHTKFIEDVFMKKEFATL
>gi|260687215|ref|YP_003218349.1| biotin carboxyl carrier protein of acetyl-CoA carboxylase [Clostridium difficile R20291]
MNINEIKELLKAIDSTNLEYVKLESSDLRLEVSKKAQSTSSPVLSVQQESVVDLSLEKPVVNDTPVTSNE
NLSVVVAPLMGTFYDSPSPDADSFVKVGDVVEEGDTLCILEAMKLMNEITSEIKGEIIEVLVSNEELVEY
NQPLFKIKPL
>gi|260687216|ref|YP_003218350.1| hypothetical protein CDR20291_1863 [Clostridium difficile R20291]
MESKFFNWYTQSLGGTFGIISCICAYLNGYMFVYTNSASKYFESIGFLGIISSYTLLPLCMLTLIFGVIY
SYTPETSDKSIFNIPFFTLNKRLILITVVFGFIGARVYFIIPAILITFNLYSNVLIAKLKYILCKNKEND
TNLKESEV
>gi|260687217|ref|YP_003218351.1| hypothetical protein CDR20291_1864 [Clostridium difficile R20291]
MWEGTMNLANLIPFIISAAALSPINSNDKVLSENQLKDIFPDANLRAVVKRYINPDEMTISNIKALDGEF
YATGESISNLKGISYLENVDNFIFWNNNIKEVPKEALSLKDMDSINLANNYLIDDDVVNSLSHNGVDVNC
DLNFIDTKDNQYKLDSKYHNVDIAKGESIDLRKIITKKIDSYYKYWEVTDNLPKDLDFIVSVSDKSVLSC
EDMIIKGNKTGQAVVKVILSDKNDLNTSQEVLITVNVK
>gi|260687218|ref|YP_003218352.1| tRNA guanine-N(7)-methyltransferase [Clostridium difficile R20291]
MYFTNFLYVRRIIVRRRRKKGADEKLLSYTKYVLRDDIDKLKGKWNLKFRNDNPIHVEFGTGKGKFITTL
AKQNPDINYIAMELKEEVLLKAVEKADASNLNNILFLWGDVSNILDYFEAKELSRIYINFCDPWPKNRWS
KRRLTHSGFLEMYNRVLEDDGEIHFKTDNEKLFEFSLNEIAANNWLLKNISLDLGNSEYENNVTTEYEDK
FMSQGMRIFRCEAKKRN
>gi|260687219|ref|YP_003218353.1| hypothetical protein CDR20291_1866 [Clostridium difficile R20291]
MKITLPETAIDTLKSILKDNQDKPNNIRVYFAGVGCGGPSFGLALDEKKEDDLTYEVGELQFVMSSDEYS
QYGDIIIEDTGFGFRVIPENMKDQGGGGCSGCSGCH
>gi|260687220|ref|YP_003218354.1| hypothetical protein CDR20291_1867 [Clostridium difficile R20291]
MHDELKIKMYSFTMDCKDPHELAKFYAALLNWEIAFYNEEYACVGAPGTNQGTYPGITFQRNSEYKPPVW
PEKPESQQQMAHMDFAVNDLEEAVQYEIHCGATIAEEQFTDDWRVMIDPAGHPFCLCQMKSIMESSHFSL
L
>gi|260687221|ref|YP_003218355.1| putative glyoxalase [Clostridium difficile R20291]
MKFGGVLLIVKDINKSKKFYEDVMEQKITLDLGEHVSFENGFGLQSNYKAIIGYDLPIYQQSNNFQLYFE
VNDIKQWESKINRIGNIEFLHYIKEYPWGQRTFRFYDFDKNIIEISESMESVIKRLLKQGLALEEISKRT
MYPVEFITQFQQL
>gi|260687222|ref|YP_003218356.1| AraC-family transcriptional regulator [Clostridium difficile R20291]
MLKKESIHFINKNRSLIVCEDNFVYLLPCMQLKNWISNFTISFPNQTIISDNYTIIPHGSVTLVFFYDAT
GLHSLLFGPTTKPKTVGNIANRCDVILIIEFQPAGFFPLIGIQQSELIDKVVPFSIINTSLDLEIKKIFN
ESLSIDKLILKLEELLISNIKIEYSYEFILAIQLIIQNSGNISSQEISKKVFYSSRHLNRLFNQYLGLSM
KSFSRLVRINKSIKLLNNNKTSLMYICNELGFYDIPHFIKDFKIVCGITPQKYRANMSDFYSEIAKF
>gi|260687223|ref|YP_003218357.1| ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MEVNMKITHNSLAVEAKNIIKEYKIGNTTTRVLKEVSLQVMKGEFVSIMGQSGSGKSTLLYILGGLDTPT
SGKVYMNGADISHFNDEKMSIIRRRNIGFVFQFYNLIPNLNVEENIMLPLLLDGKNLKDYKNQLDEILDI
VGLTDRRKHTPRELSGGQQQRVAIARALVGKPEILFADEPTGNLDSKTGIEIIDLLNKINRDNGQTIIMV
THSPEAAKSSSRTITVSDGLIV
>gi|260687224|ref|YP_003218358.1| putative ABC transporter, permease protein [Clostridium difficile R20291]
MKIILKYIFTNIKERKIRTAVMLLSIVLSTVLLFVSFSIGLSYESAQRKMAKGMYGTATISVQSKNPDVL
TNLEDIPDLNAIKSKVGVLESSAIYNKGGYYEEFSLISADLSQLNKINKPRLENGDSITDFSGDKIILPN
RFTSKYKIKKGDSITLQIYGKSYTFQVSDIASYDTVFLRNTRGVNALLPKETLSKIINKGSGYTRVLIES
EEEMTENLVNKLSEELSTEKYMVSNTINETKIISDARQKTMPFFLISFFALTLSIFIIYSSYKVITLERL
PFIGTFRSIGANEKTVTRILMLESILYGSIGGLIAIPIGVVVLNLMLHGLGNSLEQGISIPVVISPIGVI
ISVIVAIIVSSFSAYIPVKKASHLPIKNIVLGTVEEKNVSNRSILFIGSIMFILSILLPRISPENTLYLA
GGFSLLGLIVATIVLIPLITDIMSIVFEFVYKNILGNEGKLAARNMKNNKNIIQNITLLFISISAVIAIS
VVGNFVKTYITDVFRDAELQGFADGKMNEEFIENVRHMDGIKKILPLYVMNNEISGNGVTLSRLEGTDNI
KLYNSMFGINYTNFEIKKQVIEAFNDKRSVILNEDTLKKVGLSIGDTITLSNDKYDFSYKIVGSFKSRAN
DVEAVIPSHYAVNDFDKTNYGFLVYTAVNPDVVMIQIRDLFGDTYNWSRTVEEFNNDSLNTISSFLSPMN
KMTYFIFLLATVGIINNLLINYIQKKRSIAMYKSIGLSDKQNIKVTLIEGFTSGLLGAVIGIVISILEIQ
TIFIVAGPKISMKPDLDFKTFIIVGLLGIIVTLIGSIVPIIKGKKMKLIEEIKFE
>gi|260687225|ref|YP_003218359.1| putative two-component sensor histidine kinase [Clostridium difficile R20291]
MHKPSYKTVFHSYIIFFMIFICLILTVIGIFLSLITIQKPNGEFIRSDWPKKFTENFNEQIIFIDNKPQV
KQSGLEKLRENQLWLQILDSSGNRVYGFLEPKEHKDYYSNSELLTLANQNNSSNGTVYFNTIKNNKNDYI
YIIYFPLNISKVNMFFDGSKFVGGKSIVFSIIGIIFLIILISGIAYGYWVTKCISNITSAVSDISKRSYL
PVNIKGVFADIYNSLNILNEEIHRSDEIQNKTDIMREEWISNITHDLKTPLSPIKGYAELLTDSSTNYSP
EKVYKYASIMLKNIEYTNTLINDLKLTYQLKNGIIPLNKNKYDLVRFLKELSIDILNYPEYESNIVEFKS
NIDNINFDFDCTLLKRAFSNLIVNAFTYGDKNTKVCVHITLNERIEIIISDNGKGMSREEASNLFNRYYR
GSNTKQKIEGTGLGLAITKQIIEVHGGNISVESIPGLGSSFYITFPI
>gi|260687226|ref|YP_003218360.1| hypothetical protein CDR20291_1873 [Clostridium difficile R20291]
MKKQKSPILLEMLGLFLGCISMSIGINMFLKPHTIAPGGLSGLSLVLNKVTGLPVSAIMLIIGVPLVILA
FRIMGTKNSLKTLFGTVVFSAIVQLTDPLSKLRFTNDLLLSSIAGGILVGIGLGIMFKSDASTGGTDLIA
LILSKKFPGIKATKFMSCLDGMVVISSGIVNRSLETALYSGIALCVLIKIADMIMEGFDHSKAFFIISDE
PESLRQAITEELDRGLTILDGKGGYTRENKEVLLVVVSKKQELYLKRLVKRTDPTAFVIVTDVHEVLGEG
FKNLEN
>gi|260687227|ref|YP_003218361.1| putative acetyltransferase [Clostridium difficile R20291]
MNSIFRLMYKGGLEMSDSEYPQMKTLETRSCILRPASLDDVEDFFDCYKNKIVVKHLPFSEHKSLEDTRK
FIKSFFLNPYKKGKIGHFAIVYKRDNKVIGNMGFNNINPKALEAEIGICINPSYWGHDFATEITKRVIQY
GFRELNLNKIIAITYEENQNSTKSLDLLGFKCTGKYIKKIHTGNTVKNVPCYQYELKKQ
>gi|260687228|ref|YP_003218362.1| LysR-family transcriptional regulator [Clostridium difficile R20291]
MNIKLELYKVFNAVVNNKSFSLAAKELFMSQPAVSQSIKQLEEQLDTLLFYRNNKGVKLTPEGKILSEHV
TTALKLISSGEDRINKFKKLEYGSLKIGVGDTAARFFLLKYLEIFHKKYPHIHVSTINRTSRELISLLKD
GNIDIAIINMPIEDDTLNIVECIEIHDIFVCANDYIEYKGRKISLEELNTLPLIMLENKANSRLYVNEYF
LSKGIKLNPDIELGSHELLLEFAYINLGVSCVIEEFSIDYLENEKLFKLDIKEPIPKRNIGYCHLKDISL
SLATKEFLSMISNNI
>gi|260687229|ref|YP_003218363.1| hypothetical protein CDR20291_1876 [Clostridium difficile R20291]
MDRLVGTVSRGVRAPIIRQGDDLVKIVVDSVLNASKSENFEVRDKDVIAVTEAVVARAQGNYAHVDNIAK
DVKDKFGDDTVGVIFPILSRNRFAICLKGIAKGCRKVVLMLSYPSDEVGNHLISIDELDDKGINPWSDVL
TEEKYRELFGYNKHTFTGVDYVDYYKNLIKDCGAEVEIVFANNPKTILNYTTSILTCDIHTRQRTKRILR
QNGAKKVYSLDDIMTASVDGSGYNDQYGLLGSNKATEETVKLFPINCDEVVNKIQGNIKEITGKDVEVMV
YGDGAFKDPVGKIWELADPVVSPAYTKGLEGTPNEVKLKYLADNDFADLSGDELKEAISKYIVEKDNKSD
DLTGNMVSQGTTPRRLTDLIGSLADLTSGSGDKGTPIIYIQGYFDNYTK
>gi|260687230|ref|YP_003218364.1| putative ABC transporter, permease protein [Clostridium difficile R20291]
MSLVKFSIQYIKHYKKQSISIVLSIVLSVALLTGIGSLVHSADKSRIEKIREDSGDYHYFYKVDKEQLNK
IKKNKKSKEYIVDRLGVTKPKNQIDEPFIIEFLNADSSYLDMTGRKLLKGTLPSKDGEIVLDTYSLNNLN
VNKEIGTEINLDGKIYKLCGILSSLSNPETAMEGFVNDYLQPKEKDSYIVYVKYDENKNIKKQNYKFMKK
FNISKEKTYINWPLSVEFGVKPPKNIEKYNIFEFLKNLELNTNAIILLVGVFGAAAVYSIFHVSILQRIS
QYGVLEVLGANNKQLLFLLFLELFLLFIVGFPIGCFLGIGVASTIYEQFPHIFLSSDIVPGAFFISEKSI
YLGFLFILLLLILIAVRVVHQLNKYSSIESMKNFKITNKKKRILESVKHSNMTKVLSHKYMTQKRGMFIG
ILFSLSLGGIIFLCSSYSIQLTKNNNELTMKADDGLNSDYQITMQTTDFDVGIPKDKISRLNNVEGISKV
YPVRYLFGAMQIKEEQLFWKNFFKPLEKDYRIKTFFDGICTKQNEGGYLLKTNIYGYNNGMLEGLNSYII
DGEINTHDMVKNNKVIVRLPMDGTGMYDAVDINPGDTIKVKVPKTMKPTGEIVKFKEENKNDYTTKEFVV
AATVKRVMANNIYFIGDYGMDIVMTNGQMKNNFDIENYNSVSIKKTEDSNSEELSENIKSVVSDVKRCIV
TDYTIAIEKNNTYLNQKLLFIYGIVFVLLAISLFHIINTVSYLIFSRRHEFGILRAMGITDNKFLLMMIR
EGFLYGFYASIIMVIGSVIGQFMIYFMVKRVYLYINPILKINTPLYIGMIILNITISIVAVIIPVRQILK
SDIISEINKS
>gi|260687231|ref|YP_003218365.1| ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MSILVTNNLVKHYGKGETKVKALNGVSIEIERDTFTAIVGTSGSGKSTLLNIIGGLDNPTSGDVIIKGKN
ISKIGKKDLTVFRRRNIGFIFQNYSLMPVLNTYDNIALPVTLDKGNHIDHEYIEMLMKTLGIWDKRLKFP
SELSGGQQQRVAIARALANKPALILADEPTGNLDSKTTMEVVCLLKESSAKFHQTILMVTHNENIAQVCD
SIIHIEDGVVVNTGGEVL
>gi|260687232|ref|YP_003218366.1| two-component sensor histidine kinase [Clostridium difficile R20291]
MFILAFIICTVVIFIVSTKINQRRYDELNLMLNQILEGKEVTYPDTKDTRASKISHQVKKIKDMIEIEVE
QSKSEKEAIKGLISNMSHQLKTPLSNITIYCELLENINISTLQKKEFLQKMKNETFKIDWLLQSLFKMTK
LEDGVIEFEVEELLIKDTLIQSISTIFNKSEAKNIRINLEPFSDIKLVHNKKWTIEAIVNVLENAIKYSP
SDSTITISVIKMELYTKITIKDEGIGIDSRELNDIFKRFYRSKNVENQNGTGIGLYLTRLILEKENGNII
VESKLGSGCCFSIFLQNCKSLN
>gi|260687233|ref|YP_003218367.1| two-component response regulator [Clostridium difficile R20291]
MNLLIIEDDINLNEGLFYAFENDGFNVFKAYTKQEGLNIFNSKNIDFIILDCNLPDGDGFDVCQIIREKS
DIPIIMLTARDSEIDEVKGLEIGLDDYITKPFSLSVLKARVKVAIRKKSNNKVIYSNGIKLDQKLLKVYK
NKACLELSSVEYKLLSYLIENKGQILLKEQILHHIWDSEENYVDDNIVSVNIRRLRVKVEDDPSNPKYIK
TAYGMGYLWNEVE
>gi|260687234|ref|YP_003218368.1| putative reductive dehalogenase [Clostridium difficile R20291]
MFARANYKKDSTAYNDYYKKNPDKKEIDDSIRNRPNLCSEGTMTYNELNSPMASSAFDFLSDIKSLCEGK
VSDTKVDVDAKSMTKKIKGLAKQYGASVVGITKLKDYHIYTNRGRHEENYGEEINLTHKYAIVFGCEMDK
EMINRAPMICEVIETSKCYVDASIVGMILSYYIRNLGYDARNHMDANYLVMPVFIARDAGLGDIGRNAIL
TNKDYGSRLRLGVVTTDIPLLEDEYVDFGLEDFCKVCKKCSFNCPSHSLSNDIKIGDDGKYNWVIEHETC
YIKWRYLGTDCGMCISACPFSQNLETIKNTTSFKGNNELIQKALDEYTSKFGKRIFIPGNPSWLK
>gi|260687235|ref|YP_003218369.1| two-component system response regulator [Clostridium difficile R20291]
MEKILVVEDDSILNKTLSYNLIEDGYIITSKFTAKSALKSIFECEFDLIILDINLPDKSGFELCNEIKEN
YNIPIIFLTANDMECDMIKGYELGALDYITKPFNINLFKQKVKAFLNHLTTKTKQDYYRDGYLEINFSEL
SANINGNQIIFTPLEYRTLKLLTENPKSILTRKVLLEKLWDIDANFVDEHTLTSVISRIRSKIEKDNLKY
IKTVYGMGYMWLGERNEF
>gi|260687236|ref|YP_003218370.1| two-component sensor histidine kinase [Clostridium difficile R20291]
MKEMNFKKFSFSSIYLIIAVGIIFTAILFNISIYLITDDLKLIALLLIYTIVLCGFIALIIFLLHKKIVI
FCSKICHTLDSMMNSEDNIEIELEEETILSRINHRLIRMYEVIQENRNSIAIEKADLQELVSDLSHQIKT
PIANLKMINTTLLNQTFKTEIQKDFLMDMENQLDKLDFLMQSMVKTSRLETGIITLSKKKNSIYETIATA
LSGILFDAEKKNIEVTVDCDPNLYIIHDKKWTSEAIFNILDNAVKYTNSNGKIRVATECWVMYTKIDIID
NGKGISESHQAEIFKRFYREEDVHDIEGIGIGLYLSRKIISLQGGYIKVTSDIGKGSTFSIFLPNK
>gi|260687237|ref|YP_003218371.1| ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MSILQVINLKKYYGQSSNITKALDGVTLSIEKGEFISIVGTSGSGKSTLLNMMGGLDNPTSGKVIIKGKE
LSTMTDEQLTIFRRRNIGFIFQNYNLVPLLNVYENIILPIGLDGETIDKDFINEIINMLSLEEKLYDMPS
NLSGGQQQRVAIARALVTKPAIILADEPTGSLDSRTSSDVLSLLKVTSKKFNQTIVMITHNNEIAQLTDR
IIRIEDGKIVN
>gi|260687238|ref|YP_003218372.1| ABC transporter, permease protein [Clostridium difficile R20291]
MFRNNNRTFIRKIALNDLKINKLKTYLSGIIIMISTCLLLTVTLVSYNASVDLVNASPYHAIYKSVDEKA
KNILYKDKNLSGVGTYKLIGSNKKTDCIMSIVYADDTAIKLMNFQPLKGKLPTNKNEIAISEKYLQEFGL
DKDIGDSIKLNYYDDITNKEVQCDFIIVGFLENYYQDNAKQYYTVVSNDYFKNIASTPLQNKSNTFDESR
PDTVDVLVKLSEENTEKDSASIKTQLKKIGLSLGIKKYNIYLNDNYIESNLIDGEQIITVLVVGIVVLFS
SVFVIYSIFYISVVNSVQMYAKLKSLGMTSFQLKKTISLQGNILSIIFIPLGAIASCIIAYIIQPLAWQM
IADLFIILILSLVMFLTVRISLFKPARIISKISAIEAMQYTETKFRKQAKNFSYINIKNLALKNIESNRK
KNLIALISLSISGVLFISIANLANSIDFKKQLSQQFVYNEDYIISIKSDNLYEHITEIQQNNPLTDSLKN
EIKSIHGVKKLIESKSIKSNIIEPYIKDRDEKQFITLIKGITPELSKSLEEYIVSGKIDYTHLDSDSLII
NKYRTKSYGLNLKVGDTVTFNIFSGNDIIKKKMKIIGIIDNSNTGGMFFASDKTLESLTPYNTNLDFSIL
IDKKHSKEVEEKLLSIIQKNSNLMLYSYEDDYRMITRAFQYIIIASYIFVGLISCFGILNMTNTLINSVL
IRKKEFALLQAVGMTRKQLRNMLYREGLNISIKAICTSSILGYFGSNLLCTFIKDVIRLDFINFKFSIFT
ILIFSFVLIGIQVLVTELLIRNIEKKSLTERLRSQ
>gi|260687239|ref|YP_003218373.1| hypothetical protein CDR20291_1886 [Clostridium difficile R20291]
METKQYLIDFYNTYDEDSRLALKHGMVEFLTTMHYIDKYIKSGDCVLEIGAATGRYSHTLARQGYDVDAV
ELVEHNIEVFHKNTQSNENISITQGNAMDLSVFPDNKYDITLLLGPLYHLYNKEDKQQALHEAIRVTKPG
GVVFAAYVISDGCLIDEGFHRGNINVSEYIEKGLIDPQTFAAKSEPKDLFELVRKENIDDLMSAFNVTRL
HYVASDGLALYMREAVDSMDDDAFALYLKYHLATCEREDLVGVTSHAIDIFRK
>gi|260687240|ref|YP_003218374.1| hypothetical protein CDR20291_1887 [Clostridium difficile R20291]
MPPKVKITKEMILNTVLDITREVGFEAVNARSIASKLQCSTRPIFTCYENMNELKNEFLAFAYEYYNQYV
VNYRNSKSVSPYLLLPLSYIEFAQEETYLFKLLFINDLDLMMKEANDFYKEIDNEKKARLFSESIGIELE
CAKVIFLDLFLYTHGIAVLTATKKLTLDRYSAEKMLKNILTAFIRQEKPDWNLSI
>gi|260687241|ref|YP_003218375.1| hypothetical protein CDR20291_1888 [Clostridium difficile R20291]
MERLARREQPHIKFGMFKIRIPFIHYRFEKPEAIQGIISSMTSLGTIGLSTQILGLPYEVAWSMAIINSI
LYCLHVFMGDPVVPGWITASITLTTAYLLKFSMGIERIQALTALQIDLGIIFILMGITGVAGKLVSKIPN
SIKGGILMGVGISTIISEFNPKGRFDSYPISITVGILVACFVMFSERFDTLKVKNKFLFHLGEYGVVSAI
LVSLIVGIFSKEIEIPRFSFDNLVYIVDFKNLINTVSPFGIGFPSVMLFIQGIPMAFMIYIIAFGDFITG
ENLVLSESENRKDEYIDFNSNRSNVISGIRNIFMAIFSPYIPMCGPLAATLTGSVAQRYKVGKEAMQSVF
SGMGTLVWVSAIFICFYPIAQIATPLIPLALSVTLLVQGYLCTKLSMELCNTGVEKGLIGLMGGVIAAKG
GTWGLAVGFILYFILIDSKKRKEKDINSIEDCVYEILDKKKSI
>gi|260687242|ref|YP_003218376.1| putative acyl-CoA thioesterase [Clostridium difficile R20291]
MKVNVYNVESFVDERLKIMVSDLIPNTKLKISVKMEFPWCKGEEFSSYGVFCSNEKGEVDLDLVEPIEGT
YKADNCMGLIYSLEKSKTEGKNFAENISIDKPIIMNMIFETSTERKEVELKRIFKSEDITTKYISDEFIG
KLFYKQNSNNKTILMLGGSDGNLDALDLLAAPLASRGFNVLTVAYFALEGLPDKLEEVPLEYFEKVFEWI
SENEITSTKEIFVHGTSKGGELAFLLASRYEQIKKVVVSQPHIYCFQALNGLMSGNDTSSWSYKGEPFPY
IKVDNDIFFEEQKKNISKGIPFGFNSTYKKSLKRAENRKEARIKIENSKADILMIAGKEDNIWNSYEACL
EALEIFEENNYPYNVELLTYNNMGHPLPIPYIMPLKETLCMSMSGGIFSSGGTVEGNSKGQFESWNRTIE
FYKKLLSSDLNN
>gi|260687243|ref|YP_003218377.1| hypothetical protein CDR20291_1890 [Clostridium difficile R20291]
MITFDVNGAIIRFDDTKNNYNKIRKIFKLYALEISKNFERDCLNSFQNLKQISDRGLSLGEKYIEESFKK
GIETIVSFGIITIDIDTFKSVYCEKYLDFKRLFNNLNKTFIIPNKNKKNGHASFLEIESTIKKMSNYLYN
DCFKIHYAVVDALIENRITAVHSYIDEESIKKSNALFNNYKDGFIGKADECKVVKQIITLNPYREDVYEF
LVKEDGDFSKEIERLTEFLGYDIKEYKASLMDIYINELMESDENDVENAKEKIEKYARYIGCSDENLYVA
RVNAIYTFANA
>gi|260687244|ref|YP_003218378.1| hypothetical protein CDR20291_1891 [Clostridium difficile R20291]
MFGVIANSLAIAGGCIVGLIIKGGLPQRVSDTIMNGIALCVLYIGISGALEGKNTLVTIISVAVGALIGE
LIDIDKWVNKLGAFLQSKFSKGNKKDSIAEGFISSSLLFCIGAMAVVGSLESGLTGSHDTLFVKSVIDGI
ASIIFTASLGIGVMFSAISVFLYEGIICVGASFLNGFLSDPVVTEMTAAGSLLIIGLGLNVLKLTNIKVA
NLLPAIFIPILFGVFGII
>gi|260687245|ref|YP_003218379.1| putative regulatory protein [Clostridium difficile R20291]
MSDLNNKKEQDENESSMNETKIYDILDKLNVEYDVVEHEAVYTAEQLVILDGITKGCQCKNLFLRNAKGN
KYYLIVVKGEKQVDLNSLKDKIGSSRLSFASPERLYNVLKLLPGSVNPFSLINDTERKVELYIDKDVIKE
DYLNFHPNINTKTVNISRKGFEEFLEYLKYPIQSIDA
>gi|260687246|ref|YP_003218380.1| putative cyclase [Clostridium difficile R20291]
MKVFDLTHVTHNDMPVYAEPNRPDIKKVAIIEENGYQETLISVFSHNGTHMDSPRHMYTKGETLDKLDIE
NFVGKAYVLELEKGNENIELEYLKKYEDEIKNSDFIIFKSGWSKFWDKKQYYVGYPTLTKEAANYIANTN
IKGIGIDMLSVDRYNTSVFEVHHILFEKGKIIIENLTNLENVPEKFLFIAAPFKYNDADGAPVRAIAIVE
>gi|260687247|ref|YP_003218381.1| hypothetical protein CDR20291_1894 [Clostridium difficile R20291]
MIWIFNGYKNRSNIYIRRNYMKIAIFLGAGASAAENLPIQNELFSEYFKKLNPTNYNTKMNRELYIFFKQ
MFNIDIVKDNIDNANFPTFEEVLGLLDLAEQRKEAFRNFGLENLNNRSDSIRFLRQYLILLMAEAIHNTP
RTDNKYHKLLVENLLENDLLLDTTFISANYDIHIDNTVTGLRDKNDLPIMLDYGVEFTNFKEELNWRKPK
EPLIKLYKIHGSLNWLYCPICNSVTLTPHEGGVMKLIENSSETKCLECGELTEPIIVPPTYFKNMSNIFL
SNVWNETEKTLRDTDLLIFCGYSFPEADMHIKYMLKRVQTNRKKPPLKIMVFNNHSQKQRITLKKEEGRY
KRFLGEDVIFTDNSFQDFSVNPLRFIKNI
>gi|260687248|ref|YP_003218382.1| putative peptidase [Clostridium difficile R20291]
MKEQIKEKVNSLQDEMISSIQESVKIPSVISEATENCPFGENVDKALRGILDLCKSLGFKTVYKDGYYGY
AEIGQGEKMIGILGHVDVVPEGDLESWNYPPFEAVLEDGKLYGRGTQDDKGPTISAIYAVKALMDLNVDF
NKRIRFIFGADEENLWRCINKYKENNEEIPNYGFTPDSRFPITNAEKGLLQVHLTCDSKSDIELSVGKAL
NAVPGKAIYIGKYSDKLKKELDKLNFEYTVEGNKICIIGKSVHSAASDTGINAVARLCIALNNIGIDSNI
IKFLAEVIGEDANGNNIIPNCKDDVSGKLTVNIGRVTIDNEKEFAGIDVRIPVTYKKDDFVKELKKMTDK
YNLNYEEYDFLDSIYVPEDTLLVKTLRKVYEEETGLDGTPLSSGGATYARALDNCVAFGAIFPGKPETEH
QANEYLIVEDIIKATQIYALSIYELLKI
>gi|260687249|ref|YP_003218383.1| hypothetical protein CDR20291_1896 [Clostridium difficile R20291]
MLNETKELLKDYYGIDDDTFKLSQEIMEEIKDKFEEIKEIREYNQYKVLKAMQESKLSDMHFNWTTGYGY
NDIGREKIEEIYSKVFNTEDALVRPIIVNGTHALTLCIQGIVRPGDEILSVTGRPYDTLEGVIGIREEKG
SLKEYGVTYDDVDFLEDGNLDLEGIKNKINDRTKLVMIQRSKGYSWRKSLSISDIKEAIEVIKSVKPEAI
VMVDNCYGEFLDTKEPTDVGADVMAGSLIKNPGGGLALTGGYIAGRKDLIELISYRMTSPGIGKECGLTF
GTTRNVLQGFFLAPYIVSQAVMGAIFCSRAFEKLGYDVLPKYDDLRSDIIQCIRLNNADEVISFCEGIQE
AAPVDSYVKPVPWDMPGYESEVIMAAGAFIQGSSIELSADAPIRPPYNVYFQGGLTFDHSKMGTLKAIEF
IKKLKK
>gi|260687250|ref|YP_003218384.1| HfQ protein [Clostridium difficile R20291]
MKNTVLNLQDLFLNNARKERIPVTIYLVNGVQVKGLVKGFDSYIILIEGDNRQQNMIYKHAVSTIQPGKY
INLTNQNQNNNNNNNR
>gi|260687251|ref|YP_003218385.1| tRNA delta(2)-isopentenylpyrophosphate transferase [Clostridium difficile R20291]
MERNVMKKIPLIILTGPTAVGKTDLSIKLAKDIDAEIISADSMQIYEYMDIGSAKVTEEEMQGVKHYLID
EVKPDYPFSVSEFQQRAKKYIHEINEKGKCVLVTGGTGLYLNSLIYNMDFAQSDANNELREELQKQLAEK
GIDYMHNKLKELDEESANRIHKNNTKRVIRALEVCLSGKKMNDFSSDLKFNEEYQPIIIVLNRDREHLYQ
RINMRVDIMIKNGLVEEVKKLLSMGFKKDMISMQGIGYKEILKYLDGEYTYEEAIEIIKRDSRRYAKRQI
TWFKRYKTARWFDLDQYENIDELKNEIILYIKDSIK
>gi|260687252|ref|YP_003218386.1| DNA mismatch repair protein [Clostridium difficile R20291]
MKNIINILDDLTINKIAAGEVVERPSSVVKELIENSIDAGANKISIDIIDGGKSLIKITDNGIGIPSSEV
EKSFLRHATSKIKKIDDLYDLYSLGFRGEALASISAVSKLEMTTKTKDEIIGTKIYVEGGKIISKEPIGS
TNGTTIIIKDIFFNTPARQKFLKSTHAETINISDLINKLAIGNPNIQFKYTNNNKQMLNTPGDGKLVNTI
RSIYGKEITENIIDVEFKCNHFKMNGYIGNNNIYRSNKNLQHIYINKRFVKSKIIIDAITESYKSIIPIG
KHAVCFLNIEVDPSCIDVNIHPNKLEIKFEKEQEVYIELRDFLKVKLIHSNLIGKYATYSDKKTQPRIAI
NSREKSTDYKLRNNDLLESTPKNSNITKDKDEVIEVVTLSSEKPINEFQSVSEVLNASVEDDVKNINYLS
EDSANDNIQEEFQVDGIKNEGNYYLGDSIKDSEEEYLCSSKRKFSLYGYSVIGVVFNTYIILSKDDSMYL
LDQHAAHERILYERYMEKFYRQDINMQILLDPVVIEVSNVDMLQIENNLELFMKFGFELEIFGNNHIMVR
CVPTIFGVPETEKFILQIIDNIEEITSNYDLKGERFASMACRSAIKANDKIYDIEIKSLLEQLEKCENPF
TCPHGRPIMVEISKTEIEKMFKRIM
>gi|260687253|ref|YP_003218387.1| DNA mismatch repair protein [Clostridium difficile R20291]
MQIDMNKLTPMMKQYLEVKNRYKDCILFFRLGDFYEMFFEDALVASKALEIALTGKACGLEERAPMCGVP
FHSANSYISKLVENGYKVAIGEQMEDPSTAKGIVRREVIRVITPGTVLDGNLLENKKNNYLLSLYKDGTN
IGLTYVDISTGETNATCLNEDKVIEEIAKIHPTEIIINDLDFIEKLRDIATVSNIYINESFSDNYLDINI
LKEYFPDVYLQKLKFDDKGLIKSSLSILLNYIYNTQKQITSNINNINIYNSSEYMVLDMFTRTNLELTQT
IRGNKKKGSLLHVLDKTSTAMGGRLLRKYVEEPLINKSKIENRLDVIEEIKDDFILREDLNDILKNIYDI
ERICGKIAFERVTPKELIHLKNSIEKLPNLKDTINLSNAKILKEYVSEMDKLDDIYNLIDEAILEEPTIT
IKDGNIIKSDFSDELKELREISKNGAFLVKEIENREREKTGVKSLKIGFNKVFGYYIEITKANFKQAKLD
ETYIRKQTLSNAERYITPELKEIEEKILHAEEKIKSLEYEIFVEIRDTIYKNIDRIQKVAKTIANIDVFV
SLATVAHINNYVKPAINENNKLDIRNGRHPVVENIVGEENFVPNDTYLNRGENIINIITGPNMSGKSTYM
RQTAIIALMAHIGSFVPAESADIPILDRIFTRVGASDDLSQGQSTFMVEMNEVSLILKNATERSLVILDE
IGRGTSTYDGISLAWSIVEYIQKNIRCKTLFATHYHELTDLEEEFKEVKNYSIAVKEDGEGIIFLRKIIP
QGADKSYGIYVAKLAKLPDEVIERAKYILKDLEKNHVYNSVAINGDKENNNIINSNLDEELVKVNQSNFK
NKYESLKIEHELIVKDYKHIKKDYDKLNSKFKALNDEVALMKQNDDKEKINQEDSVKEVALTQISFDSVN
RDILSEEILNLDILNMTPLDAINSLYNLQRKAKEIKS
>gi|260687254|ref|YP_003218388.1| ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MNFYHNKKVKVSIENVSKTYKDIEVLKDISIDVYEGEFVSILGPSGCGKSTIFNIITKLTDYDSGKVNIN
GKYSYMYQKDLLLPYKTIIDNVSLPLILKKEKKSKARSMVKPYFEVFGLSGYEDKYPSELSGGMRQRANF
LRTFINSNDIMLLDEPFGALDSLTKTSMQKWLLDVKKKVNSTILLITHDIDEAIMLSNRIYVISKKPSIV
KKEFVIDSRKLNEDNLENIIKLKKEIISLL
>gi|260687255|ref|YP_003218389.1| ABC transporter, substrate-binding protein [Clostridium difficile R20291]
MNFKKLGILGLVSVFTLATITGCSSNNNKDKNNDKDTSSKKVTMVLDWTPNTNHTGLFVALDKGYYKEEG
LDVEIVQPPESGAETLVATGKADFGISYQEQVTYAKTSEDPLPIKAVATVIQHNTSGFASPKEKNITTAK
DFEGKTYGGWGSPSEEAVFKAVMKKNGADFNKLKIVNTGQDDFFAAMKTVDFAWIFEGWDAVKADLIGYD
LNFIPVKDLDERLDYYTPLIISNETVLKDNPELAKKFLKATTKGYEYAIKNPEESAKILVKHAPEVDEKL
ALKSQEYLASKYKDDAPRWGEMKDSVWNNYTSFLKEYKLIDKDMKASDAYTNEFLPQ
>gi|260687256|ref|YP_003218390.1| ABC transporter, permease protein [Clostridium difficile R20291]
MKNLEIIDKVKDSIYPIATFLFILILWQSMVGVLEVPQYILPTPVDIINVFFKDYQNLSMHAVVTIGEAI
LGFIVAIIISLVIGILMDFVSIIKKCLYPIMLVTQMIPTIIIAPLFMIWFGFGTMPKVLMVMLTCFFPIL
ISFVDGIENIDKDYLNLFKTMDSNKVNTFIHLKFPMAMDKFFSGLKISATYAVMAATVAEWLGGTKGLGV
YMLRSKSAYALDKVFASTILVVIFSLMFVGIVQAVKKVVIRHRLID
>gi|260687257|ref|YP_003218391.1| hypothetical protein CDR20291_1904 [Clostridium difficile R20291]
MVIADIAVMPLRPYKGEEEMYKVVDACIAEIEKSGLKCEIGAMSTTVEGDFDEVFELLKKVHKIPFNLGC
ERVITVARVDEKAGGLTIDEKLRNHR
>gi|260687258|ref|YP_003218392.1| putative transcriptional regulator [Clostridium difficile R20291]
MDIDNNFEEFPNIEERQKDFNCSIGFTMTVIGSKWRAIILWHILKQEPIRYSQLKKDVVHISHKILSQEL
KYLERDGLIKRISYPTIPPKVEYLSTKRGKSLESILLELCNWGKQYMR
>gi|260687259|ref|YP_003218393.1| transposase-like protein b [Clostridium difficile R20291]
MIAVKKAYKFRIYPNKKQQELINKTFGCCRFVYNKYLAKRIDVYKNDKETFTYKQCSSDLTNLKKELNWL
KEPDKFSLQNALKDLENAYNKFFKEKAGFPKFKSKKTNRFSYKTNFTNGNIVYCGQHIKLPKLGMVKIRD
KQVPKGRILNATISKEPSGRYYVSLCCTDVDIEVFENTNNQIGLDLGIKEFCISSCGDFIENPKYLKKSL
NKLAKLQSELSRKTIGSLNRNKARLKVARLQEHIANQRKDFLQKLSTKLIKENDIICIEDLQVKNMIKNH
KLSRSISDVSWSEFIRQLEYKANWYGRKIVKVGKFFASSQICNKCGYKNEEVKDLSIREWICPSCNETHD
RDINASINILKEGLRLITIQNK
>gi|260687260|ref|YP_003218394.1| hypothetical protein CDR20291_1907 [Clostridium difficile R20291]
MAKNHQENYDVHIRFFTPTNEVPICGHATIAAHYVRAVENQFNNKTVFQKTGAGILPVDIIKKDNDYEII
MTQGKIEVSPPLQQTYQKRLLNAFGILNEDIRTDCPIAISSTGHSKVMIGIKELSTLNSLSPNLYELSKI
SQEIKCNGYYIFTLHNKETLQVHGRMFAPAIGISEDPVTGNANGPLGAYLVHYKVIPIPNTEFIFEAVQG
EAIKRKGKMLVKVIISDNKPVEVKIIGKAVIAFSTNIEIEL
>gi|260687261|ref|YP_003218395.1| NUDIX-family protein [Clostridium difficile R20291]
MINDIKNKFKNYKPYINGYKNMKRASVLIPIIEINNTHYILFEVRSKNLKHQPSEISFPGGKIESGETPY
EAVIRETCEELGTFSDNIEVISSLDLLITPVKFIIHPYLGYIKNINNLNINKDEVDHTFLVPIKYLLENP
PNTYSNTVKVFPDENLPYGSIPNQKDYKFESGSYPILFYKYKDYVIWGMTAKILENFLNFLSE
>gi|260687262|ref|YP_003218396.1| hypothetical protein CDR20291_1909 [Clostridium difficile R20291]
MFAVGFVVIIALAFFILSVLLFNGKASMLLAGYNSMSKKEKARYDKKKLCRSSSIVTFIVSIMLFIMAFL
GYRIESGQMDEKKMVPFSIIFIIVILSSVFFNILYSNKKCKK
>gi|260687263|ref|YP_003218397.1| putative radical sam protein [Clostridium difficile R20291]
MNEHDSEKLCSMLEEMGYQMSMMVEESDLIIYNTCAVRENAELKVYGNLGQLKHLKGKNPDMKIAVCGCM
MQQPHVVEELRKKYKHVDLIFGTHNLYKFPQLLTESINSDKMLVDVWDVDGEVIEGLRSNRKFELKAFVN
IMYGCNNFCTYCIVPYTRGRERSRTPEDIINEIKELVANGTKEITLLGQNVDSYGKTLENPVSFSELLRK
VNDIEGIERVRFMTSHPKDISDEVIYAIRDCDKVCEFLHLPIQCGSSSLLKKMNRHYTKEYYLEIIEKAK
KEVPGIAFSTDLMIGFPGETEEDLLDTLDVVEKVRYDSAFTFIYSKRQGTPAAKMENQIPEDIKHDRFNR
VLEAVNRISAEINDGYKDRIVEVLVEGRSKNNENKFAGRTRQNKLVNFEGGNDDLIGKLVMVKITEPRTF
SLNGILVNN
>gi|260687264|ref|YP_003218398.1| cell surface protein [Clostridium difficile R20291]
MKFYKRILTLTLSISFVFANIQLVDAISSVEKIQGKNKYEIAGKIADKNAYKTAILINTSNSIADGLSAS
GLAGALNAPILLTEKNTIPTETSARLKNVSKVYIIGGTYSISTSVENSLKSKKMKVVRIKGNDRIKTSYN
VAKEINSIKKVNTVMLTNAYKGEADAISIASVAARDKAPIILTNGQSIPFSTSGLKSYVIGGTASMSTTL
VNNTKSTRLGGSTRFETNKAIINKFYKDAREFYIAGAYELTNALVGSSLSKHGPIVLVNDGSNKSILKNA
KKITSIGYIDSNIVQQCLNITNGIGDINTGVVKNVKPTTKTIKDGMYKVGKDISAGEYLITSNSGSYASY
YEVTSDSTGNADSILSNDIFSGTRYITLKNGQYIKIEDSTMTLAKYAKAQKAKNGKFGNGMYKIGLEIPA
GEYIIMSNSSDAYYEVRNDSLGNAEGIVTNDTFSGRRYITVEEGQYLILNDCYLIENE
>gi|260687265|ref|YP_003218399.1| putative tryptophan transport protein [Clostridium difficile R20291]
MKTNTKKLTLNAILLAMGLLIHQITPAIGLPMKPDVPLAMLFVILVLNRDDYKTCLIAGIVTGIFTALTS
SFPGGQIPNVIDKTLTANIVFLLMNISYNMPFIKKLAKKTQDTVVVAIIMPIGTLVSGTIFLLAAQAIVG
LPGASFTALFLAVVLPAVLINLVAGIFLFKIVSLSIRRVSYQA
>gi|260687266|ref|YP_003218400.1| hypothetical protein CDR20291_1913 [Clostridium difficile R20291]
MNKKKKLIGIAISFLLIISIINPLQVEAEAIIESSVYISSIKENYTYDNTKFKTIKSKSRHKSRKYNKSK
VKLKKRSIRTKKVWISNYK
>gi|260687267|ref|YP_003218401.1| hypothetical protein CDR20291_1914 [Clostridium difficile R20291]
MISELMLKNFGKSSINFKTKIKLNLREKPDINSLKLKSIPEGKIVKLKCVDGIWAEVESNYDKGWLLYKY
LERLSNAKNNSNDTIKNRKKNYIGNIRTNGLSLELRNDRTLESKVITTIPDGFKVEVCYSVGKWARVNIN
KNEKRYSGYVYNQYIEEHLSL
>gi|260687268|ref|YP_003218402.1| cold shock protein [Clostridium difficile R20291]
MNNGIVKWFNNEKGFGFISMEGRDDVFAHFSAIQTSGFKSLEEGQQVSFDIVKGARGPQAENITIL
>gi|260687269|ref|YP_003218403.1| putative lipoprotein [Clostridium difficile R20291]
MNIIKSITLLLTLLIVILMTGCSPRESASEVAKKYIDKMNSGDYETAYSLLSKDSKKKISIENLEEFQNI
LVSTKRIISYKIGKEKIIKKYKHDGKEYKNVVKLEETFNIKNLLYKKDDSLKVNRYFVVENNKYKLLLYE
SFKKEFGINSMDLAQLKLNDFGLKYFKEVDLILKKAIAINPTDSKLYYAQACNYMNFDGFPGYSDTTYNA
LDSINNSLKYLDKNDSDYKKNASNIYNLKGVILMFHKRFDEAQQYLNKALYFNKDNEDPKYNLNTIKKHL
N
>gi|260687270|ref|YP_003218404.1| hypothetical protein CDR20291_1917 [Clostridium difficile R20291]
MFGKPKESVRFLDFNDVAEKFGEKKAVAIFDAIAGKKSKEHIIKDIEKLVKNEV
>gi|260687271|ref|YP_003218405.1| putative decarboxylase [Clostridium difficile R20291]
MNTREMKEYRGFYNKKLSETDEFFRVFGSLDDKTYSEGAISKKNKELMGLAISILSRCDECICYHIEGCI
NSGASKDEIIEAIKIGVIGGGSITYPNARFAIKILEEFNI
>gi|260687272|ref|YP_003218406.1| hypothetical protein CDR20291_1919 [Clostridium difficile R20291]
MKKAINKQFILSTLICFIPFIVSIYFYNRLPNEVAIHFDNYGNPDNYAPKVIAAFGVPLLMLCIHLYTWF
RLENEPKKANFSNVIQNLSKWGVAILSVILQILMVLYSTGVSLESNFYTGLILGIIVILFGNYLPKCKQN
YSVGIILPWTLDDEDNWNKTHHLAGWIWLIGGILLIINAFINIPFYNIFVIFVIVILPFIYSYLMYKISG
KNN
>gi|260687273|ref|YP_003218407.1| ArsR-family transcriptional regulator [Clostridium difficile R20291]
MVLGFPETFKALSDPIRREILVMLRENKMSAGEISEKFNMTNATISYHLSQLKKAGLIFETKYKNFIFYE
INISVFEEVMLWFSQFMEKGEKDNEKSDK
>gi|260687274|ref|YP_003218408.1| hypothetical protein CDR20291_1921 [Clostridium difficile R20291]
MPVLMAIGVPVHLAIGTNKFAASAGCISSAYRYAKSGKINNDLLKKLVPFTIIGSVLGVRCVLSISEEIL
NVLVVVMILIVAIYTFISKNLGQEDNFEAVNKKNLRLGMLMALIMGFYDGFFGPGTGTFLTFGFIKIYGY
DFLHASANTKILNLTSNITSLLLFMINGQVDYKIAIVFALVMIMGAYVGAKVAIKKGSKMIKPIFLVMAL
FMVVKLVYQTLV
>gi|260687275|ref|YP_003218409.1| AraC-family transcriptional regulator [Clostridium difficile R20291]
MVDFIESNNEVQKFDWGEVMWIHEPSKTQFNRLSAGIVRFFPGNCQEKHFHLSEEQLLYVIQGEGIQMID
GKKVNIKETSIVYCPPYSEHEIINTGKIDLVILITYVPHKFSSLRQIPIVFSENNIQELVNVNIIENLAN
QISNILKLRISVYDLKYKGIFETKKENKFCDICKNIKPCTKKLVKSINNDNFEKVYHCEYGVSSLEIPIV
LEENIVGYIECGNFIVYKSIDIDKNLSELSSSSGIDIKYINKIYNEFPLNPKSRLYVLKENLLMMSEFIQ
EIAKRNFFENQLSIKDEEILKSRKENIRLEEALKKANSRLLEEEYIINPIDMFNNSSKEYPFELELYIEK
EIKNMNLEGVYNLIDTNKLRYNDVRDTIQEMIFVLSRTVLRDLEDLKLISYLRNKYNKKISLVDSDEDLW
NVLFEFSKECIDKNRAFWRKDKGNLIENINEYIKKYYKENINLNSISDVFFISPNYLSSIFNERNKVSIT
EYINLLRIEESKKYLLDRSMSISDICKKVGFNNSSYFSQIFKKFNSITPNEYRKNMLDNKY
>gi|260687276|ref|YP_003218410.1| hth transcriptional regulator merr family [Clostridium difficile R20291]
MKYSITDVSKITKISSSAIRFYEEKGLLLPINRKPSGVRYFSEEDVERLIFIKELKNTGLSIKDIHECFH
FCDMGDGTIDKRIQLFQQHKQNIKNKIHELESCMDKIDEKIYYLKEKKMCKK
>gi|260687277|ref|YP_003218411.1| hypothetical protein CDR20291_1924 [Clostridium difficile R20291]
MEKYATMIKEKLNEGKVLCGVAVSLSDSVVSELIGISGYDFIWIEGEHSALDRKDIQQHMIAAHAGGAAS
LVRLVNSDPDLVKPIMDMGTDIICFPFINTVEDAQKAVAACTYPPNGIRGYNPQRASYYGNMNYFDYVKN
ANNETLKMMLIEQKAGYDNLEEIVKVEGIDIIALGPGDLSLDMGFSGYMNRIEIKDMISHAAEICKKYKM
PFIIFPTIEKKSIEEWVNIGANMLCFAQDTTFITYVINQLLSFYNEIVPIQKQH
>gi|260687278|ref|YP_003218412.1| flavodoxin [Clostridium difficile R20291]
MSKIYIVYWSGTGNTEKMANFVAEGVKLKGKTPEVLDVSLLKPSDLKEEDKFALGCPSMGAEQLEEGYME
PFVSELESMVSGKQIGLFGSYGWGNCEWMRDWEERMQNAGATIIGGEGITAMEDPNEEAKDECIELGKTL
AE
>gi|260687279|ref|YP_003218413.1| major intracellular serine protease [Clostridium difficile R20291]
MMNKRMKLIPYEINENLRGAKNKFPYGIKQMNARGMWDEGYTGKNIVVGIIDTGCDISHPLLKGKIIGGA
NFSDDSNGNKNIYEDFNGHGTHVAGIIAASNYNNEVMGVAPDCKLLIAKALNKDGTGTYQSIINAINFAV
NNKVDIISMSLGGNKDDKNLKNAVMQAVKNNISVVCAAGNNGDGDSSTSEYSYPASYAEVIEVGAINENY
LVEKFSNSNTTIDLVAPGRNIISTYMDNKLAIMSGTSMSAPYVSGSLALIKEWAREEFERDLDEAELYAQ
LIKCTRALGIPRTEQGNGYLYLNLYKYKNNSKR
>gi|260687280|ref|YP_003218414.1| dihydroxy-acid dehydratase [Clostridium difficile R20291]
MRSDIKKGIEGAPKRALMYGMGLTKEEIERPLIGIVNAQNEVIPGHLHLDEIAEAAKNGVRMSGGLPLEF
PAIGVCDGIAMGHVGMNYSLASRELIADSIEAMAMAHGFDALVLIPNCDKIVPGMLMAAARLNIPSIVVS
GGPMLPGKKNGKVYDFNSAMEGVGACKDGTVSEEELEELAMNSCPGCGSCSGLFTANSMNCLTEALGMGI
PYNGTAASHSGERKRIAKYAGMYVMELLKNDIKPRDILTIDAFKNAIAVDMAMAGSTNTVLHLPAIAYES
GIEFNLDFFDEISEKTPCLTKLSPSGKHHIEDLHMAGGIPAIMNELSKINGINLDCKTVTGKTIGENIRN
CEIENEEVIHTLKNPYSNQGGLAILKGNLALNGAVVKKSAVAEEMLVHEGPARVFNSEEEAVNAIFGKKI
NKGDVIVIRYEGPKGGPGMKEMLSPTSAVAGMGLDKHVALLTDGRFSGATRGASIGHISPEAMEGGLIGL
VEEGDIISINIPDKKLELKVDEVEIENRKLKFKPLEPKIKHGYLSRYAKLVTSANTGAVLK
>gi|260687281|ref|YP_003218415.1| hypothetical protein CDR20291_1928 [Clostridium difficile R20291]
MIWTFYSFICVILPCLIYQIVVIKRKNLKVEKNVMIHLVWVYIFLLYIYLALSKAGIGSIWDIGRYSGLF
RIDEINLIPFDSVGILTYILNIIMFMPLGFLLPLIWKNFRNIINVSLTGLGFSLAIELCQLFNLRATDID
DLMMNTLGAVLGYFIWVGVNNLFNLIKKKDIFPSIYKNIIQDEIAITIDDDISKKITSLYKNEAIIYLIL
AVLGEFLLFNWSIIPY
>gi|260687282|ref|YP_003218416.1| hypothetical protein CDR20291_1929 [Clostridium difficile R20291]
MIIIRSQDKTNLMQINQIKIDGSQVYAVFESKIDTVKIGDYENNTRAIQVLDNIQNFIENGTKYDYITSN
KVRYNVNKIFQMPAK
>gi|260687283|ref|YP_003218417.1| putative phage regulatory protein [Clostridium difficile R20291]
MESLGDRIANLRKELDINQKELATKVGITEASLSRYENNLREPKSEIIVRLAKALETSTDYLLGVNDNTK
ISKEDKLIIENLSVSEKTKKLLEKIYSLEKEDREAIEKMIDNAYLKRFLKEEN
>gi|260687284|ref|YP_003218418.1| AraC-family transcriptional regulator [Clostridium difficile R20291]
MKDKNTYFNRKGQENFIDIFLKDDIKKGANFKRHWHEHLQIYYFIDGIAYLECGLDNFKVVPGNIVIANS
NELHYLESLSDNLKFYSIRIEPTFLFSNQVDLLQTKYLAPLALNHIVFNNLIQNDFLILKCITTILDEYH
NKEVGYELSIKANIYQLIVLLLRSHIDKIYSEDEFIKRKYSLEKFECIFDLIEEKYMDKITLKELASRVN
LSAHHFCRTFKQITGKTTIDFINGIRLDKAIYYLKETDLNMTEIAMRCGFDSINYFSRLFKRNYNISPTK
YRNEHREVSNVILKEDMK
>gi|260687285|ref|YP_003218419.1| putative transporter [Clostridium difficile R20291]
MTNSFKKDDNRKKITVLFVVIAMTFMATLDSSIINVALPVLASKLNVSLASIEWVIASYSIIICSTLLFF
GRLGDIIGKSRVFQVGTILFTSASLLCGLSNSLTLLIVCRFIQGIGASAYMANNHGIITELFPKESRGKA
LGILVTAVAIGNMVGPSVGGFILSIFDWNVIFFINIPIGLIVIFLNTKFLPNSKKSSENMDKTGAILQFL
GTTLFFSALISAQQTGLLNPYILIALLLSIIFIILFLILEKKHPQPLLDLEIFRNFKFSLNLICALTSFI
CIASSSILIPFYLQSTMKLPPIQAGLFMILSPLILAIFSPIFGNISDKIKSEKIILIGLLVMSFGFFLMS
RLKESSALILFVIYISIISIGQAIFQPANNALIMSSCSRSKLGVVGSINSLVRNLGQVIGITISTTLLYN
FMSIKAGYRVNDYVINNDKIFVFGMRNVYIIVTLVCLIGAILIGFYLFKYNKNEQ
>gi|260687286|ref|YP_003218420.1| chaperone [Clostridium difficile R20291]
MDVEKMTLRVQKSLNEAYNEAVKNHNQQVDVIHLFSALINQEDGLIPNIIEKMNISIDSLRNTVNFEIDK
LPKVYGEGADSQGVSATRKINEVLIKAESISKEFKDSYISVEHVMLAMMETESKSAVGKILKQYNINKND
FLNILSQVRGSQRVETQDPEGTYDALARYGTNLVDLAKKNKLDPVIGRDEEIRRIIRILSRRTKNNPVLI
GEPGVGKTAIVEGLAERIVRGDVPEGLKDKIVFSLDMGALIAGAKYRGEFEERLKAVLKEVQSSDGKIIL
FIDEIHTIVGAGKTEGSMDAGNLIKPMLARGELNCIGATTFDEYRKYIEKDKALERRFQPVIAEEPTVED
TISILRGLKERFEIHHGVRIHDNAIVAAAKLSHRYIQDRFLPDKAIDLIDEAGAMIRSEIDSLPTELDVV
RRKLFTLETEREALLKENDDKSKSRLDDIQKEIAELKSKNDEMTAKYEKEKSQILDIKNLKAQLDEAKGK
AEKYEREYDFNKAAEVKYGEIPKLEEQIKQYEENMNDGSENSLLKEEVTEEEISSIVSKWTGIPVTKLVE
GEREKLLKLEDELHKRVIGQDEAVTAVSNAVIRARAGLKDERKPIGSFIFLGPTGVGKTELAKTLARNLF
DSDDNIIRIDMSEYMEKHAVSRLVGPPPGYVGYEEGGQLTEAVRRAPYSVILFDEIEKAHEDVFNMFLQI
LDDGRLTDNKGKTVDFKNTLIIMTSNIGSNYLLEAGGNITETTNNLVMNEMKHRFKPEFLNRVDDIIMFK
PLDQENIKKIIDIFMKDLKNRLKEKDITIEVTNSAKDVMVREGYDPVYGARPLKRYIGNTLETIIAKKLI
AGDVYNGCTIVIDGKDENIEVLVK
>gi|260687287|ref|YP_003218421.1| hypothetical protein CDR20291_1934 [Clostridium difficile R20291]
MSLKLDRNVLQWFDYVFENEKTSLRHYNFNCTLKEISSTSLNKVAFILEKNNSKYWKLYFEIPAEVTLKL
KQNIHPLFREYIYEQISLYNNNQIYNFVNSNILKVFNNIAIYQYNILENLYTIDFKKSFIDKCQYLLIGE
KRLIDEDLYLIAKSKEVFDFFNSDGTFNLTLSFDIQKNENLLDSLLELRKSIIINERI
>gi|260687288|ref|YP_003218422.1| hypothetical protein CDR20291_1935 [Clostridium difficile R20291]
MDKTLKKDLNQEYTESKSLVMNKSKYMNICFKNYIKVVEGMYTKRDLIPLKLINSMDKNNKIRKTLYELS
CEFEYPKTSLSSLFTELKKMDFLQRVKNGEYMINPHIAYKGSRADKESLLAEYNQIKRPNKVSK
>gi|260687289|ref|YP_003218423.1| GntR-family transcriptional regulator [Clostridium difficile R20291]
MNIVISNSSGKPIYEQITTQIKSMIISGELPEGSALPSMRLLAKELRISVITTKRAYSDLERDGFIETVT
GKGSFVSSKNMDFVKEEQFRLIEEYLQKAVDTAKSSDITYDELKDILFLLYKGE
>gi|260687290|ref|YP_003218424.1| ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MISMDAITIKNLNKTYKDFSLQDISFSVPKGSVMGFVGENGAGKTTTLKAILNLISYDSGNIEIFGLDSK
KNEKEIKEQIGVVFEGSNFHENLNTDHVSKIMSKIYKNWNDTLFKDYLKKLRVPDNKLIKEFSKGNKMKL
SIAVALSHKPKLLILDEATSSLDPIVREEILDIFLDFIQDEEHSIILSSHITSDLDKIADYITFIHKGKI
VFSENKDELIDTMGVLKCKPSDFDNLSREDYSYYRKSQFGYEVLLKDKHRFISRNPNCIVDNTSIEEIML
FYVRGDK
>gi|260687291|ref|YP_003218425.1| putative ABC transporter, permease protein [Clostridium difficile R20291]
MKGLILKDLLNLKGNVKFILLFIIMFGFMSSLGDGNVNNFIGVIIVLCTTMIVSTFSYDDLNKWDSYVLT
MPINRNDIVLSKYLTMLIFSFIGVLVSLIVSVTIGYFKNTLILNETLLINALILSISVCFGSLILPLIYK
FGTERARLLMILCFLVPTLALLVFKSILENISSPISIEIILNTLVYSLPFVAILLFVISYFISSKIYSKK
EV
>gi|260687292|ref|YP_003218426.1| putative acetyltransferase [Clostridium difficile R20291]
MELEITEKIEKQDEDTIFQGLLKYNLARLEDKNPVDLGIYIRDKAGKIVAGFIGVTHGNWLSIKYLWVSE
KLRYKGTGSQLLYKTEKIAKERGCKYVFLDTFSFQAPKFYEKFGYHKVFSLENYPLTGKRYYYRKIL
>gi|260687293|ref|YP_003218427.1| N-carbamoyl-L-amino acid hydrolase [Clostridium difficile R20291]
MLGKKCMDYLQTLGKISSTTNGLTRLILTQEHKKSIDLISSWMEGLNLDIEIDDIGNVIGTYKSSFPNAP
TLVVASHQDSVKCGGIFDGMLGIIVPLVGLEEAKHNNRSYPFNIKLIAFAEEEGTRFETSLMGSKVFAGT
FKEELLKSVDENGITLEEAVTKFGFNTKNLTNLHPRKDVDAYLEFHIEQGPVLENESLPAGIVSSITGFK
SFKISVNGKSGHAGTLPMNMRLDAGCCACECVLAIEKVAKTTADLVATVGKMNFYPSSSNVVPERAEFTL
DVRSCSQEILDNSVEKIFNEISHICENRKLNYTSELAFENVPVPCSNKITKIIEKSFIDLNLNPFYIYSG
AGHDAQEMDNITDIGMVFIRCAGGVSHNPNESVSVDDLDTAVKIFLKILDNLDLK
>gi|260687294|ref|YP_003218428.1| putative amino acid racemase [Clostridium difficile R20291]
MNEKLIGILAGMGPRSTAPFVDLIIDECQSQYGAKYDDEFPKMMIYSLPTPFYIDRPINHELMKETIIDG
LQKLESTGVNFIAMPCNSAHIYFKELKESINIPILNIVEETVKKLPTISQKVTLFSTSSTFESTIYQNGI
IHNGHEFIFKDEWQIKLNNLIQNIKMDKENPHNIDIWNKLIEDVKNESIENIVIACTDLNVVLEKSYPSI
NIVDSSKCLAESVVNKYLKLVK
>gi|260687295|ref|YP_003218429.1| putative lipoprotein [Clostridium difficile R20291]
MKKIILALTTFLLAISLTACSSAKPEDTIDSFFNSAKKFDFEGMNKVMENNDEKYKDILKELDTKDPNAQ
YVLDYLKQNASKITYTIKDSEVKGDKATIKVECKFIDSTPLLQEIVAEAFTKMIGMSFSGQDLTDEKTTE
MLVSIMKEKQKSVKETYVTKTVEFECSKKDNKWIISSVNDAVADVLLSNLVTAGQEFSNSMNTLE
>gi|260687296|ref|YP_003218430.1| ornithine carbamoyltransferase [Clostridium difficile R20291]
MNNISLKGKSFLTLKDFTKEEIRYLLTLSSYLKTKKKVGIKGDLLQGKNIALLFEKTSTRTRCSFEVAAH
DEGAYVTYLGPNDCHMGKKESVSDTAKVLGRFYDGIEFRGFKQETVESLAKYSGVPVWNGLTDEYHPTQI
LADFLTVIENVDKDLNKVKFVYVGDARNNMGNSLMIGCAKMGIHFVALAPKELWPNEELVKEMKEIAKKS
KGDIMLTENIDDVKGADVIYTDVWVSMGEEEQYEARINQLKDYQVNMDMIKKTENENVIFLHCLPAFHDL
ETKVAQKIYEKFGLSELEVTNEVFNSKYSKVFEEAENRMHTIKAVMVSTMTDVNMNNNLI
>gi|260687297|ref|YP_003218431.1| succinylornithine transaminase [Clostridium difficile R20291]
MNNNNTISKWNEYFIDTYNQPNFVIDYGEGSCFFDTNGNKYIDFTSGYGVSSLGYSNSNLKNALKEQVDK
LLHTSNLYFNEPVLYSGEKIINSSGMAKVYFCNSGTEANETAFKIARKYSSDKYGNGRGTIISLKDSFHG
RTMMSLMATGMDKYHKYFYPLPEGFKYIERNNIEDLKNNLDSTVCAIILEAIQGEGGVNVLEKDYVLEIV
KICQEKDIVVIFDEVQCGIGRTGKLFGYEYFDVKPDIVTVAKGLGAGIPVGGVLVNKKLSKVLGKGDQGT
TFGGNLLAMVAASVVLDEISKDGFYNEVLEKGNYIRKSIESFNNKVVLKTKGIGLMIGIETNIESSIIEE
KARKKGLLILTAGKNVLRFLPPLTISYKEIDEALEILKDILLEIN
>gi|260687298|ref|YP_003218432.1| acetylglutamate kinase [Clostridium difficile R20291]
MINIEKANTLIEALPYIEKHQGKTIVVKYGGSAMKKDGLKESVMEDLVLMSYVGINIVLVHGGGAEINKM
LAKVDIESKFVNGLRYTDEETMEIVKMVLAGKVNKDLVNKIHTKGGKAVGLCGMDNNMILCDPYKNYELG
FVGEIKKVNVELIESCLKSGYISVIATIGVGDDGETYNINGDTAASAIAKELNADKLILLTDVPGLLREP
DEEKSLITEVILEDVDKLFEEGIITGGMIPKIEGCVDALNNGVNRVHILDGRVPHSIITELFTDSGIGTL
IRKENE
>gi|260687299|ref|YP_003218433.1| arginine biosynthesis bifunctional protein ArgJ [includes: glutamate N-acetyltransferase and amino-acid acetyltransferase] [Clostridium difficile R20291]
MEIIKGGVTVSEGFFASGIHCGLRKNKEKRDLALVYSDVLCDAAAVVTQNKVKGNPVYVTQEHIKNGKAQ
AIIVNSANANTFNGKEGLINAYKMAKFTSDKLNIKENDVLVASTGVIGKPLNINLIEENMDELVNNLSKQ
GHIGAREAIMTTDIIKKEIAVAIMYGDKKITIGGMAKGSGMIHPNMATTLGFITTDANIDGVLLKEALKI
AVDKSFNRVSVDGDTSTNDMVMILANGKAKNDRINKKDEHYQVFLSALTYVCIELAKLVAKDGEGCTKLI
ECYINGALSEEHAVKLAKTVISSSLVKTAVFGADANWGRILCALGYAGEEIDMEKVDIIFESMKGYIEVC
KNGNGLDFNEEKAKKILEDDEISILVDLNMGNARGNAWGCDLSYDYVRINGSYRN
>gi|260687300|ref|YP_003218434.1| N-acetyl-gamma-glutamyl-phosphate reductase [Clostridium difficile R20291]
MNKIKVGIIGATGYVGAELIRLLMNHDKVEVTAIGSNSYVGKNIVDIYPSIGYKNNMICIENEKVIDMCD
VVFTALPHGVSEKFVIKAIKSKKKVIDLGADFRIKDEEVYSKWYGVSFIDKILHKKAVYGLSEIYKEDIK
DADIIANPGCYPTSISLPLMPLLSSKLIKNNNIIIDSKSGLTGAGRELSISSHFTEVNENITAYKIGKHR
HTPEIEQNLSESCKEKVSVVFTPNLIPVNRGILSTIYCTKEDNISINDIHRKLTDYYEFKEFIEVLPLDK
VASLKNVRFSNKCVISLHENGDTLIICSAIDNMIKGAAGQAIQNMNIIFGIEENTGLKNIAPSF
>gi|260687301|ref|YP_003218435.1| hypothetical protein CDR20291_1948 [Clostridium difficile R20291]
MQIIDININNIDSRHICCSISEKKGENCVFSKKAWMKNNFDKGLAFKRFDVRGKAFIEYIPAENAWCPIT
ADNYIFINCFWISGKFKGQGYSNLLLQECVDDAKSKGKYGLVVLSSSKKMPFLSDAKYLKYKGFCLADTS
EPNYELLYFPFTDNAPIPCFKNCVKKRKLNENGIVLYYSNQCPHTEKYAPILKKIANSRGIDVNLIKFET
AKEAQNAPAPFTTYSLFFNGEFVTNEILSEKKIEKFLDTNIKKI
>gi|260687302|ref|YP_003218436.1| hypothetical protein CDR20291_1949 [Clostridium difficile R20291]
MFKEYLIRELKEDDIKNALDLIWNVFEEFESPDYCDEGITTFHQFIEYNSIIEKIKEKTLFFWGCFDSKK
LIGVLAIRNLNHICMLFVDKNYHKHGVAKKLMTTGIQYCICNKFNLTEITVNSSPYAVEVYHKLGFEDIA
VEQIVDGIRFTPMKLLI
>gi|260687303|ref|YP_003218437.1| putative transcriptional regulator [Clostridium difficile R20291]
MRVSREIVIQATSDIVNKDGLNKVSLKVIAEKLGIRTPSLYNHIESLDDLLLEVAHKGMREMNSQMIKAT
IGNFGDTAIKCISIAYFNFIISNPGVYETIQWATWHGNNETLEIFDEYKSLLEKLILSCNLNTKNTGEVL
NLIMSVLHGYSTLQLGKSLLSKEEAIKGLADSIDTVLLGIHKKYD
>gi|260687304|ref|YP_003218438.1| putative hydrolase [Clostridium difficile R20291]
MEKKYFEIHGVPSILWGNPSSKLYIYIHGQCGNKEEAEAFANIAVPHEYQVLSVDLPEHGERKREKNSFN
PWHVVPELVSIMEYAKCHWNQISLYANSIGAWFSMLSFEKENLRECIFVSPILDMQQLISNMMLWANVSE
EQLKHELIIPTSFGHTLSWEYLQYVKQHPITQWNVPTKILYGKHDELTEIGVVEKFVEKFNCNLTILENG
KHWFNTPQELNSLYEWLNTLVK
>gi|260687305|ref|YP_003218439.1| hypothetical protein CDR20291_1952 [Clostridium difficile R20291]
MITKFFSNILSVFLYFLLSLLGVAGIIFLCMIPMFLYDFSSDKVIALIARILYFSDYFIVILFLIFIINS
TKYSPFILENVKRFKVMGCCLLINTIIECVIGYNSNTSLIMIFGDNSGGISPLMVISFIFALMCFVIAET
FDKAIKIKEDNDLTI
>gi|260687306|ref|YP_003218440.1| putative transcriptional regulator [Clostridium difficile R20291]
MAIVVNLDVMMAKRKISLKDLAEKIDITNANLSILKTGKAKAIRFTTLNEICKALDCQPGDILEYVEDEN
D
>gi|260687307|ref|YP_003218441.1| hypothetical protein CDR20291_1954 [Clostridium difficile R20291]
MDEMLVYNKSFYPNDIFPRLDFSKIKKQLKLIDNDLSDFGRICIIEKEHYTISVNSIGEINVYYDLEYEN
KVYRIVYEIEKLFKSQVGRFSISTYRN
>gi|260687308|ref|YP_003218442.1| RpiR-family transcriptional regulator [Clostridium difficile R20291]
MEETNEMKDSKHLISNIQSQYTRLSKGQKLIAQYILNNYDKVAFMTACKLGETVGVSESTVVRFANALGY
SGYPKLQAALQELIKNKLTTVQRVEMAHDYSDDFAILNKVLKSDIDNIRSTLEEIDERAFKEASNKLLRA
RKIYILGMRSSFVVAQYLGFYLDIILDNVHIIRMDMGDAFEQIVRINEEDVIVAISFPRYSKKSYQIVNY
AKEKGAHVISLTDSLFAPVASLADNTLLVKSNMASFVDSLVPALSISNALAISVGMKEKEDIKQHFDDLE
QIWKRYSVYE
>gi|260687309|ref|YP_003218443.1| hypothetical protein CDR20291_1956 [Clostridium difficile R20291]
MAYAKYLTKITDINKFYLENIINEGDIVIDATMGNGYDTRYLAEKVGEKGFVYAFDIQEEAIKSTRKKLE
KEGYTDRVKLIFDGHEKMNQYIKEEVSCVLFNLGYLPRAKHSIITKPDTTLKAIKLSLEMLKENGVISIA
IYTGHDGGQEEKDCIYNLVNNLNQDEFNVLESKFLNQVNNPPQLILIEKKKA
>gi|260687310|ref|YP_003218444.1| putative 23S RNA and tRNA pseudouridine synthase [Clostridium difficile R20291]
MRINKYIASCGIASRRKSEEIILGGRIKVNGSVVKELSFNIDEEKDIVEFDNKKVKPSENYIYIVLNKPE
GYITTVKDQFNRPSVIDILKDVRERVYPIGRLDYETSGLLILTNDGDLTYKLTHPKHEIDKTYVASVKGI
ISDDEIRQFETGLKIEDYTTAPAKIRVTKENKEKNYSVCEITIHEGRNRQVRKMCKAINHPVLNLRRISV
GKIVLKDTKVGEYRYLTEDEIKYLKSIK
>gi|260687311|ref|YP_003218445.1| hypothetical protein CDR20291_1958 [Clostridium difficile R20291]
MIIILKENIKYYLIVVFIGILFFKFINTPSNFISSIEGFLKFFSPFLLAILLALLLNPLVMLFEVKFKAH
RLLAIFLSYIFIGFILAFAIRLLIPSIANTLNRLINEMPMYTDYIDSFIEKNMSNIDFLKTLIPHIQHSL
DNLLKEASNFVGKIPKNFLIYTLSISSMLFNMTMGFILSIYIIYDKEKIALGFKRFLYSSTARNKADNII
EFFRTTHDIFYDYLLGRILDSLIIGIIAFLGFQFVIRIENALFLASIIFLGNIIPYFGPFIGAIPPIAMT
ILYSPQKTIWVIAFLFILQQLDGNFIEPKVMGNQVGIGAIWVISAILVGQSLFGFIGVFLSVPIAAVVKT
YVDKYIDNRLQ
>gi|260687312|ref|YP_003218446.1| putative lipoprotein [Clostridium difficile R20291]
MTRRDLMRGRVILLISILSIFLVGCSFNKKDEINLVEQGKTYLEKHNYKKAMESLSSALEEDSTNENARA
MYMQAMRMSNMTEFEELKNYEGAIKELKLIEKIKNGSSVIKEEATKKKEELTKLEKEQNEAEEQRKKKAK
DTAGEDRYRVESDARKSSYSGSSKNNKYSSKNNDKKSDSNKSDNNNSSSQNQEKPNNSNPTPAPTPQDTT
GGSDSGGNSQNSNNQ
>gi|260687313|ref|YP_003218447.1| diaminopimelate decarboxylase [Clostridium difficile R20291]
MKLHGTMTVNNDELYIGGVSCLELSKKYQTPLYVFDEALVRQNCREYIEYFKAREGKNKVAYAGKAFLPL
YMCNLINEEQMCLDVVSGGELYTAYKSNFPMEKVFFHGNNKTKEEINMGLDLGVGKFVVDNFYELDLLEA
LCEDKGKTQEIYFRITPGIEAHTHDYIKTGQIDSKFGFALVNGDLFRAIEKLSEYKNIKLVGLHAHIGSQ
IFDVEPYIDTVDIMMNLVKEIKEKFNIQLTEIDLGGGVGVYYSEGDKPKTIKEFCETIITKAETSCKELG
IEVPTLVIEPGRSIVANAGSTLYTVGSIKDIKDVRVYVSVDGGMTDNVRPSLYQASYECSIVNKINHEAM
NHVTIAGKCCESGDILIGDINIMDIKSGDILITTSTGAYGYSMSSNYNKIPRAAVVSVFDGNDKIICKRQ
SYEDLLALEI
>gi|260687314|ref|YP_003218448.1| aspartokinase [Clostridium difficile R20291]
MSIIVQKYGGSSVADTEKIKSIAENIIERRKENPQMVIVVSAMGKSTDEYITLAKELSNEPSKRELDALM
STGEMISASLLSIALNALGCKAISYNAYQLNIKTSGLHGKSQIDDINVNRIKNSLDEGNVVIVTGFQGIN
EDGDVTTLGRGGSDTSAVALAVKLNGKCEIYTDVDGIYFTDPRKYSKASKLDEIEYEEMLELASLGAQVM
HSRSIELAQKYGVEIYVGRTCGTEKGTYIRGGKDMKLEDKVITGLATSDDDSSITIKDFKAENISSLFED
IATIGISVDMISQTAPILDKISVSFTVPKEELGECKKIVSKYTDEEHVVIDNNITKFSLVGLGMKNTSGV
AAKVFKIFNENGIMIKLITTSEIRITCAINSDDKQVAIEKIAEVFNI
>gi|260687315|ref|YP_003218449.1| hypothetical protein CDR20291_1962 [Clostridium difficile R20291]
MTNMEKEILLLISRVRCVTESQFRKIYGDQKRYNKKNFKKTLRKMCSEYTLKKYPCDVDYYNYKDLSYVY
YLNGSKLFKGDDLIKALVGSELVVRINTAGCDVKRFYRNVSVDDVKYDLFIEYTDQFGNIKQVLVDVDLN
NEIDISKYENLSKKIDKSTIPFFKVPNVLVVTPDNLSELNDLERYDNEYSINFIDLGLNKLFNCI
>gi|260687316|ref|YP_003218450.1| hypothetical protein CDR20291_1963 [Clostridium difficile R20291]
MKRYLKTYGVALIIVIIYAFIKLPVLRLDFTSLFSVGIIFFVVAGILDMMLDRNERASKMAKYNFSIAIA
LLVYIVVVPFITSTPVLHAKSYRELLGKVTESKFTDDISPVSVNDIRLVDEDMAMKLGDKKLGEVPAIGS
VSKLGKFHIQNVDGELYWVAPLVHRDIIKWITSLSGTSGYVKVSASNPQDVQLVQEIDGKPIKIVYQPEA
YLHQDLQRHLYIHGIVNVGMTDFTLEINDEGRPYWVVSLYEHKIGYGGANATGIATVDAETGKINVYDVK
NTPKWVDRIQPQSFVTDQIKDWGVYVNGFLNSVISEKGVLVPTEGTSLVYGNDNRSYWYTGITSSGGDES
TIGFMLVDSRTKEARLYKQPGATETAAMKSAEGNVQEKNYEATFPVMYNILGQPTYVSSLKDKAGLVKRV
AFVSVEDYNVLGIGEDKNEALRNYKDALESKGNDLKLDNDLKDEVLEGTVTRISPDVRGGNTNYYVTLDS
NKDIIFRATSKVSSELPLTQVGDKVKISYSKEESGVIEMSEFDNLNIANFEDKKAKEKTGTDENTDSKDS
ENQGNV
>gi|260687317|ref|YP_003218451.1| hypothetical protein CDR20291_1964 [Clostridium difficile R20291]
MMNKVYIVTTYTGTILSYLIRNISKKLYTHVSISLNENLKPMYSFGRLNPRNPFIGGFVEENINQGLYAI
RKNTVCRVYSLEVDNLQYENLYKNIKLISDYREDYYYDTMALIYLLMNIQRQSEYKYVCSNFVADMLEKS
EIDILNKQAFEVTPNDFYNLSGLTLEYEGLLSEYNSRQHSYVSKIANI
>gi|260687318|ref|YP_003218452.1| hypothetical protein CDR20291_1965 [Clostridium difficile R20291]
MGKVAKILLSLIVIVLVLAGIVVYILTPKERYDVSSQNNKIIDEEYLSKGSYINSMEVVKNPLRMVGKIS
VSEEEFKNLIYTLMQKHGINELENNFVEMKNGKIKVAGPYKVFGLVNSQYELELRPTLKDGNLVVSLENV
KIGKFKLSDKMLEKILSNYNKKVPFEVNGNKITLEKSYLYPITLKNISIKKGNVDLDMEVEIDLKSQING
ALGYLKDSGKVQDILNHLINLKKTSVG
>gi|260687319|ref|YP_003218453.1| putative glutaminyl-tRNA synthetase [Clostridium difficile R20291]
MSNETNSSNFIKNIIINDLETGKHDSIITRFPPEPNGYLHIGHAKSICLNFGLAKEFNGKANLRFDDTNP
LKEDVEYVESIKEDVKWLGFDWNELNFASNYFDEMYKRALILIKKGKAYVCDLTQEEMREYRGTLTEPGK
ESPHRNRTIEENLDLFERMKNGEFKDGEKTLRAKIDMSSPNINLRDPIIYRISHSTHHNTGDKWCIYPMY
AFAHPIEDAIEGITHSICTLEFEDQRPLYDWFVKECEMENIPRQIEFARLNINNTVMSKRKLKQLVDEGI
VDGWDDPRVPTISGIRRKGYTAEALRNFCSEIGVSKVNSTVDSQMLDYFLRENLQPKAPLTMGVLRPLKL
IITNYPEDKIEMLEIENNAKDESQGKRLVPFSRELYIEQDDFMEEPVKKYFRFFPGNEVRLKGAYFVKCT
DVIKDENGNVVEIHGTYDPETKSGSGFTGRKVKSTIHWVDAKSAIPCEFRLFEPLILDDIPENEGKHFLE
QINPNSLEILQGFVEPTQIKDSKPFDKFQFVRNGFFSIDNKYTTDEKFVFNRIVPLKSSFKPGK
>gi|260687320|ref|YP_003218454.1| hypothetical protein CDR20291_1967 [Clostridium difficile R20291]
MKKVKLIYNPNSGEKKILSNLDTIIELYQEKNYLLIPYRLTIKEPVKNAFKEVDSSYEHILIAGGDGTVD
LVVNAMKELDIKIPIGILPTGTANDFSNALQISFDIKEAINEIINSKPKKIDIGKVNNKYFINVASAGMF
TDVSQRINTDLKNSFGRISYYIKGIEEALYMRKFKIKVSSEEMYYDGDMYLMLIFNGKTAGNINLAYKAE
IDDGYLDVIIFKGMPIPKSIPVLISVLRGDYLDQYNGNEILYFKTKKVHIECEDSLITDIDGEKGPDFPL
NIECIKDGIEVMGICSEKS
>gi|260687321|ref|YP_003218455.1| hypothetical protein CDR20291_1968 [Clostridium difficile R20291]
MDQNLNWLNEKRIEKTIKSLENNNMKGYLVSNKEELLKKIEEIVKVGSLVGCGGSMTLFETGVIDFIREK
YNFLDRYAKDIKPEEMKEIYRKSFSADAYFTSTNAITEDEELYNLDGNGNRVAAMIYGPDKVIVIAGVNK
IVKDVDEAIKRTKTIAAPANCKRLSTNTGCKTTGICIDCSSPGRICCSYTLIKRQLTPERIHVIFLNEDF
GY
>gi|260687322|ref|YP_003218456.1| hypothetical protein CDR20291_1969 [Clostridium difficile R20291]
MEQSFINGKVNLLIENYKALNEVKGSWQMGLIQHSCALAFTLKNKRISPRLVEERIELIKKNTGLFSNFR
GYNMFYMATLLSFESNPESSFKMILDIYKELKSEKFWGDTYLPLTASIVYENREKMDYLTCISKMKIIYD
YMRKKHPFLTSSDDYCNIALIAIHSKNLDEDLEYIEKCYEFLNENGFYKGNDLQALSQILLFSDDRTMLK
CKKTIELKKAFKENDCKMNYYGYPIIGAISLLDYREDEIIEEIKNVSNKLKEEKGFGNWSLGKSNRVMIS
SAIVASIYADLIRNENNIGSITNNIFLNIVVAIQIACVMAATSAAIASSSSN
>gi|260687323|ref|YP_003218457.1| hypothetical protein CDR20291_1970 [Clostridium difficile R20291]
MKLKEALITCVVCSVCLTPLLVNGETKIDADHCKESIVNIDTIVKSGKSFNSKYNQGMEDYKNSDEYKLK
VQKEKLQNQLGIKIKKLVPITFEVSYYTSLNQENGYGAITATGDDLEDGFVANNHLSFGTKIIVDGKLKT
VMDRGSSKYFSNSNAIDVFVPKWSNESESEYYDRVNNMGRHYKKGYIIVEE
>gi|260687324|ref|YP_003218458.1| hypothetical protein CDR20291_1971 [Clostridium difficile R20291]
MVDMIKNTKQITVEVNEILLQEISKITNDENNILTDLINESIVNYILENKKHNIENKDLEEVIKFYKKEN
TEKPKSAARAIAEAKTHTLY
>gi|260687325|ref|YP_003218459.1| putative regulatory protein [Clostridium difficile R20291]
MTITKIPPAELKVMKFIWSSDFTVASKDVIEAMEKLYNWKQTTTLTLLSRLVNKQFLSARKIDRHTHYTV
LIGEEEYLHFETKTFLDNMHGSSIESFMKSLFKKGVNEEELNSVEKWVKDIKKDE
>gi|260687326|ref|YP_003218460.1| integrase [Clostridium difficile R20291]
MYKILIGGLYMNAFIRKRNKNYVVYLEFEDEKTGKRKQKNMGTFDKKREASKRLNEVKESLYNDGFLVPS
EITVSEFLLDFLNKYSENISLATYNNYVSICKNYINPSIGKYKIQDLHPVHIQNYIDKLSYKLNPQSIKI
HINILKLAIKRAYRLKLIKENVMDSIEAPRYKKFKNEIYDREQMIKLLDLAKNTEMELPINLAIGLGLRI
SEVLGLTWDNIDFEENTITVNKITSRINGSVILKEPKTESSVRKISSPKELMSLLKEYKIKQNKNLLKSS
IRNNNNLLFFNKKCEPIAEDVMSKKFKRFLEKNELPHIRFHDLRHSHVTLLINSKVPIKVISERVGHSNI
STTLSVYSHVLKEMDKEASDKISESLFNAN
>gi|260687327|ref|YP_003218461.1| hypothetical protein CDR20291_1974 [Clostridium difficile R20291]
MVKKRLVAVVLSLAMISVGNFSYAHSGGHNSSGGHHNKNKSELTRYYCGGHSAHQPNKGFCPYASTKENS
GVTISSVHNEKNHKNYFAEKGYNKGYEDGCKGLYNLSVTEAKSDNLYEKEILKSSYEKGYLIGYNEYKAK
KVDDVMKKMLDIPMLASI
>gi|260687328|ref|YP_003218462.1| ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MLQVTGVGLRFGDKELFKDVNLKFTKGNCYGIIGANGAGKSTFLKILSGEIEPNTGSISITDKERMSVLK
QDHFEYEEETVLNVVIRGHERLWNIMKEKDALYMKEDFNEEDGIKAAELEGEFAELDGWDAETNAEKILM
GLGITKDMHYKQMKELVGGEKVKVLLAQSLFGKPEILLMDEPTNHLDFKSINWLNNFIMDLEESIVIIVS
HDRHFLNQICTNIVDVDFGKIQMYVGNYDFWYESSQLALQLAKDQNKKTEEKIAQLKEFIARFSSNASKA
KQATSRKKQLEKLEVEDIQPSRRRYPYVGFTPAREIGNEVLEVHNLTKTIDGVKVLDNVSFRLDRDDKVV
FMGDEIATTALFNIVMGELEPDSGEYKWGVTTSQDYLPKNHNKFFDGVEYSLVDWLRQFSEEKSESFIRG
FLGRMLFSGEEALKEAQVISGGEKVRCMLSKLMLSNANVLVLDDPTNHLDLESITSVNKGLEKFPGVLLF
TSHDHEFISTIANRIIEITPNGIMDRKMDFDEYLESKEIQDQLAKMYGKDK
>gi|260687329|ref|YP_003218463.1| putative molybdopterin biosynthesis protein [Clostridium difficile R20291]
MKLIKTIDAVGQVLCHDITQIIPGEFKGRKFKKGHIVKEEDIPVLLSLGKDNLYVWEKSEGMVHENEGAL
FLKELTAGENLDFSEIKEGKIDFIAACDGLLKIDVDALFDLNCVGEIMMATLHNNFIVNKGLKVAGTRVI
PLVIDEKKLEDAKKVVGNRKIVNVVPFKPKKVGIVTTGNEVFYSRIVDKFGPVIEEKVKGFGCEVIGQTI
CPDDKEIIKSAIKEFISQGAELICCTGGMSVDPDDVTPTAIKETGADLVTYGSPILPGAMFLLAYYGEVP
IMGIPGCAMYHKTTVFDIVLSRVLIDEKLDKYDIARYGHGGLCMNCDVCTYPACNFAKI
>gi|260687330|ref|YP_003218464.1| putative molybdopterin-guanine dinucleotide biosynthesis protein [Clostridium difficile R20291]
MIYMINAVIMASGFARRMGANKLLLNYKGCSIIEHVFREVSKIDFHQVVVVSQYEEVLLLCNKYGFEYID
NKNANIGQSESIKLGVLNSSKCDGYMFFVGDQPFIDNLYIDKIINTFKLDRDFIVIPRYKDMCGNPVIFP
YSKKEELLALKEDEKGKTILKNSSKIKYVEVPKEMLFDIDTKMDYERIGGKL
>gi|260687331|ref|YP_003218465.1| hypothetical protein CDR20291_1978 [Clostridium difficile R20291]
MELSNIIEKNEIITVVGAGGKTSFINYFANFYRDKLKVLLTTTTKIYVPNDYDNIIITIDGTVIPSICHG
ITVCGSYINNENKLVSIDSSILDEIVDQFDLVLIEGDGSKRKKLKGWNAKEPVVYHKTTKTIGILDITSF
GMNINEENIHRVEIFKKIANLDTSSINSSSTVSIENLKNIVLNPNGLFKNYSGKRVLFINKVENEKYKNL
AIKLIENIKEYESEIEIFYGSVKQKFCVRY
>gi|260687332|ref|YP_003218466.1| putative transposase [Clostridium difficile R20291]
MSSRVYSKGGEFMSNRIKNIHYGTQRQQLKNLTKKEYQALREMCFLAKNLYNVGTYNVRQHYFNQGEHLN
YEANYHVCKENENYKLLNSNIAQQILKEVDSSFRSFFGLIKLAKEGKYDFRGIKSPKYLDKEGFFSIIIG
QIRIKEDGILNVPMSPAFKKLYGKVSIKVPQNILEKKIKEIRIIPKHKARFFEIQYCYEIPKSEEVSNQK
NALAIDLGLENLCTCVTNLGDSFIIDGKRLKSVNQWANKQNDKIESLKLKKNITAITRKQFKVWNKRNNQ
VKDYVNKTCFYIIDYCVKNNIGNLIVGYNAKLEKSDNMERKIYRNFIRIPFGEIKGKLEYLCKIKNINFI
RQEESYTSKSDFFADDFLPDINVDNVKKYDFKGERITRGQYKSSVGIIINADVNASLNILKKSQVVNLSN
LQNNPQILKQPQRVRIS
>gi|260687333|ref|YP_003218467.1| xanthine dehydrogenase, molybdenum binding subunit [Clostridium difficile R20291]
MINKGIRKIDSTAIVTGKPLYTEDLIMHKDVLTLKLLRSPHAHAKIKNIDTSKAEKIPGVVGIYTYKDVP
QVRYCVPGQTEPEASPYDRVLLEDTVRFIGDEVALVAAEDEKTALKALKMIKVDYEVLKPVFDAREAEGN
EVVIHPEKDIVEPYPFGLDAKNNIVSKEFFEFGDVEAKLKESDFVAESSYKTQSQSHCMMETHRSYSYKD
INDRIVVVSSLQSPHNVKRIIRKVLGIPSSKIRVIKPRIGGGFGGKNIAATDIFTAFVTMKTGRPAKFVF
TRSETFVGSNSRHEMFFDVKVGADKEGNLKAIELKSLNNTGAYGGNGVSVSSESGHNTLPIYNDIDAVRF
NARTVYTNRLPAGALRGYGATQGIFAIDSAIDELAHKIGMDPLEFRIKNIIDRYTNGKAAEDEILSCELR
QCIEKGKKLINWDDKYPCKDIGNNKVRAVGMAVANHGSGIPRVDMATVTIRMDEDGTYKLLSGLADLGQG
ADTIQAQIAAEALNTTVDRISIYTGDSDLCPYDTGAFASCTTTVTGNATIKTANKLKDILLSVAESKLGF
KKEDLELGKDRVFVKNDNSKFVLLEELGRESVGGIGFASDDVPVVLEATESFGMLKKIKPFIAGFAEIEL
DKNTGEYKVINFACVPDCGTVINPTLARIQVEGGVMMGIGFAMYEDPIFDKDGRLLTDSFLQYKVPTKKE
VGNILVDFAENFDPGGPYGAKSLGEIVIHTPAPAIANAIFNATGVRLRELPMTFEKVYMGMKNNNKQL
>gi|260687334|ref|YP_003218468.1| putative FAD-binding subunit of xanthine dehydrogenase dehydrogenase [Clostridium difficile R20291]
MMGDKMVTIKEYSIPQSLEEAYKILISKKNNVILGGCGFIKLSNKNIGTAIDLKDINLNYIKEDEKNILI
GADTSLRSLEIDKTIKNYCSGILSSAVSNIVGVQFRQGARIGASVFSKYGFSDLIPALLVVGAKVRLYNK
GILELSEFLDSELSRDILVEVILPKKDAIAVFDSIRKCTGDFSVLNSAMLKENDTYKIAIGARPQKARLA
LEASNILNKEKDIDKASIVASKELTYGSNMRASKEYRKDMASALVKRMYNAIEEGMYND
>gi|260687335|ref|YP_003218469.1| xanthine permease [Clostridium difficile R20291]
MKAKSTSKFELDGIPPLKEAIPLGLQHLMAMVIGSCLPAILIANASGLNHKMSTLLIQAALVFAGLSTLL
QLYPIPLFKGFKLGGGIPVIMGATAMFIGAGVSVASKYGLPVLFGSQIIAGIVIIIIGFGLKKIRFIFTP
AVSGTIVACMGLGLFPIAIKNLAGGMGNETFGNPINFIVGISVSLMILGLNKYGKGLFKDASILVSIIFG
YILSLILGIVNFSSIQEFTLVALPKPLAFGLDIRLEVVVMFSIIYLVEIADIMGACTLSAVGGLNRQVTD
EELSSAVLGNGVLSTIGALFSATPMGMFGQNSAIVSNTKVVSKFVLAIGGIGLFLAGISPLLANLIRTIP
PCVVGGATLVIFSTLTTSGLRLVSMDGFNQENSMILGLSMASGIGFMVAPQVLEKFPKFIETLLADSSVV
SGAMVAIIIQALYMVKFPGNKSDKVEDKNKSL
>gi|260687336|ref|YP_003218470.1| hypothetical protein CDR20291_1983 [Clostridium difficile R20291]
MVMQVQEKILELLYTINEDVVSIKNDMSEVKQEMTVMKEDISEVKQEMTVMKEDMSEVKQEINVLKGDMS
EVKQEMTVMKEDMSEVKQEINVLKEDMSEVKQEMIVMKEDMSEVKQEMTVMKEDMSEVKQEMTVMKEDMS
EVRQEINIMKEDISEVRQEMTVMKEDMSEVKQEINVLKEDMSEVRQEINIMKEDMSEVRQEMTVMKEDTS
EVKQEINVMKKDMSEVRQEITVMKEDVSEVKSEVNFMQNKINNINEDMNGIKDEVSIANEKLYGIEIKID
SLECEDKSMKEIQIEQNNILGSLLHNSEINKATHDNIEHNIAYIKGDTNSIKEDIAEIRRDLNLVELATS
KNWSDIVKLKSVK
>gi|260687337|ref|YP_003218471.1| dihydroorotate dehydrogenase, catalytic subunit [Clostridium difficile R20291]
MYNFLGKELKSPLIIGSGPLTYSAAGCKILSDAGAGAVVTKTIRKERAINPAPHMVRNTANALLNNEKWT
DFEPEQWIDFEIPQMKRDGTVCIASVGHTIEESSELVEKVANAGADFIELVSYDYRDLIPMLKDAKERVN
IPVIVKLPPMIDEIGDFAKKLEEAGADAITACDSVGPAFRIDIETGQPLLGGNGIGYLSGETIKPITLQR
IYEIKKQVNIPIIGLGGCVSGDDALEMIMAGADFVGICSVVILKGAQVISKIHDDLKSNLNRLGYNTIEN
ACGIVHNHMGDVNERLSFEFTYDEEKCTKCKMCERVCAYQARKLNDKMELNEEECRYCGLCISVCKPKAL
GRKISCSELNV
>gi|260687338|ref|YP_003218472.1| putative amidohydrolase [Clostridium difficile R20291]
MIAIKSKYLISSADEIYTNSAAVVENDIIKDILPNEEVEIKYKNIEEIIDKSDAIIMPGFVNGHMHQYGV
LSRGIPANVHFTDFEGFLNDYWWPFIENRIGLKEVKATTKASAIELIESGVVAFCDTLEAPNTEEGTLIE
QGKILEEIGMKAILSLESCERISFENGLRCLDENSNLIKWSRENSKLINGIMCTHTSFTCSDRFIKKAKE
DAKKLNAPMQFHLCESIYEPNYAEKHFGKKAVDYYNDLDILDETVLASQCVKVNDEEIDILKEKGVKVVH
MPLSNCEVGGGFSPVPKMIKKGIKVALGTDGYINDFFEVMRGAFLMHKSVEEDASVMPANLVFRMATEHG
AYVLGLQNSGKIAVGNKADIIVMEDEFKTPVTLDNIFDQIVVQGKKEFISNVYIDGRHILKEKQLVDLDK
KAIVKEMKEVACEFWKF
>gi|260687339|ref|YP_003218473.1| xanthine dehydrogenase, molybdenum binding subunit [Clostridium difficile R20291]
MVNKEVRKIDSEAIVTGKPIYTEDLIFHKDVLTIKLLRSPHAFAKIKNIDTKNALKVKGVVNIFTYKDVP
NYRYSMVGESYPEASPHDQLILEDVVRYVGDEVAIIAAEDERAAIKAMKLIKVEYEVMTPILDARESEGN
KILIHEEDDLFCPFDFGLDATKNIVSREKMGKGDVEKEFKESDVIVEHSYMTQSQAHCMMETHRAYTYID
TNGRLVVTSANQSAYHMRRQVSKALGIPLSKVRVIKPRIGGGFGGKNIAVTEIYASFVTWMTKRPAKLIY
TREETFAMTNTRHQMFFDIKIGADKEGNIKAIDMKALNNTGAYGDNGPSVCSESGHNVLPTYNNVPAIKF
DGRTVYTNLVPGGALRGYGATQGTFALDCAIDELAHKLNMDPTEIKLKNIIKKQTEGGIMNFPIRSCALD
ECIIRGKKLIGWDEKYPVRDIGNNKVRAVGMSVGTHGSGIANIDMAIVNMRMDEDGTYKLFSGSSDLGTG
SDTILAQIAAKALNTSIDRISVYTGDTDMCPYDTGAYASCTTYVTGNATIKSAESLKQKILKVAQKKLDL
PIDDLILYEDRVCYSEDVEKFVLLSELGKESVGGGNQEVLYSSESYGIQESAKPFLAGFAEIELDKTTGE
FKVINYACSTDCGTVMNPALARIQVEGGVTQGIGLAMYEDPRHGSDGKLQTSNLLQYKVPTKKDIGNIIV
DFVDNYEPTGPYGAKSLGEIVIHTPAPAIANAIYNATGVRIRELPITSEKVYMAMKKLNQGGK
>gi|260687340|ref|YP_003218474.1| putative FAD-binding subunit of xanthine dehydrogenase [Clostridium difficile R20291]
MKIKLIWGESMITIKEYVVPKSLDEAYELLISRKNNIILGGCGFLKLGSKNIGSAIDLKDLALDYINETD
DSILIGADTSLRTLELNKVIKNYCNGVISNAVSNIVGVQFRSGARVGASVFAKYGFSDLIPSLLVVDAKV
KLYKKGVMNLADFLESELEKDILIEVILPKKDAIGVFDSIRKCTGDFAVLNGAMLKEGSIYKIAIGARPR
RAKIAYKASEILSLENDIEKAGEVSSEELSFGSNIRGSKEYRKDMAKALVVRMYNSIGGECDGK
>gi|260687341|ref|YP_003218475.1| xanthine dehydrogenase iron-sulfur binding subunit [Clostridium difficile R20291]
MSFEVIYLIIKCTINNKEKELSIRPDDFLADTLRENGYVSVKKGCDTGSCGLCTVMVNDKAVLSCNYLTA
RVDGQHITTLEGVLDEAKKFGDFLADEGADQCGFCAPGFIMMVLAMKRELQNPTEEEVIDYVNGNLCRCT
GYKGQLRAIHKYLNT
>gi|260687342|ref|YP_003218476.1| putative amidohydrolase [Clostridium difficile R20291]
MRGEIRMMDILIKNAIIVTVNKEREVIFDGALVVKDNKIADIGNSKEIESKYTDVKKIIDAKGKVLFPGF
INTHNHLFQTLLKGLGDDMVLKDWLETMTFPAANYLEPKDTYDAAMLGCIEGLRSGITTMVDYMYPHSKP
GLCDGIIDAYKELGIRGILGRGCMNTGAQFGVHPGIMQDVETVEKDVRRLFEKHHNTENGRIKIGVAPAA
IWSNSQEMLEMLWRVVKEYDDALFTVHISETPFDREAAKELHGQYDIDVLEKLGILGPNVLMVHCVYLTE
KDMELTKKYDMKVSHNTASNMYLSSGVAPVPEMLKKGITVSLGVDGAASNNSQDMLELMKLTALQHKVNK
CDPLAMSAEKVLELATIDGARAIGMEDEIGSLEIGKKADLLIFNPMLSPKAIPMHNPVSTLVYSSSMKNI
ESVIVDGNIIMEDSKILTANEEKALKDAQDTAERLCVRGTIKNRMEGHKWNSLY
>gi|260687343|ref|YP_003218477.1| D-hydantoinase [Clostridium difficile R20291]
MGTILRGGTIITSDKTYISDLRIEDEKIVEIGNNLEINGDKVIDATGKIVIPGGIDTHTHFDMNAGSITT
ADNFETGTRAAIAGGTTTILDFAEANEGENLLQGVEAYHKKASGNCYCDYGFHMTITCLNKDTFNHMEKL
ISDGIVSFKMYMAYDGMKVDDGTIYRVLKKARDLGCIVGFHCENGDLLDVLIEENIQNGNLEPKYHPLTR
PNIVEKESVSRLADITKLSNSKSYVVHLSCRESLETVKMAREKNIDMIVETCPQYLLLEDNLYNKNKFEG
AKYVMSPPLRKKEDINYLWEGLSSGDIQTVGTDHCSFNFKGQKDLGIDDFSKIPNGAPGVEHRLALLYTY
GVLENRISVNKFVEVTSTNAAKIFGMYPKKGEIAVGSDADIVILNINKEETISYKTQKQNVDYTPYEGFK
VKCKVEDVFLRGNHVVQSCNVKEHPTGQYIKRKITK
>gi|260687344|ref|YP_003218478.1| putative amidohydrolase [Clostridium difficile R20291]
MLNEQRKQEVTEICQKLIQNPSSSGNEEGVVKAIEESFEKLGFDSWSRDRYGNIVGCIKGNKPGKKILFD
GHIDTVPVPDASKWSVPPFEGKIVDGKIYGRGTSDMKGQYTAMMSAVAYFAKDTNRDFAGELYVAGVVHE
EIFEGVSAREISKAVQPDYVVIGESSELNLKIGQRGRGEIVVETFGKPAHSANPEKGVNAVYKMANVIQK
IQQLVPPTHPVLGDGILVLTDIKSSPYPGASVVPDYCKATFDRRLLVGETREGVLAPIQALLDEMMKEDP
ELNAKVSYAVEKADCYTGNTIESERFFPGWLYDEEDEFVQAAYKGLKEAGIDSEITQYSFCTNGSHYAGE
AGIKTIGFGPSKENLAHTIDEYIEQEQLFIGTEGYYGILKSVYGK
>gi|260687345|ref|YP_003218479.1| diaminopropionate ammonia-lyase [Clostridium difficile R20291]
MLKEIKWKVNNLPKGDKENCIKFLNEEEITKVRNFHKSFPQYKETPLANLEGLAKKLGVAGVYVKDESYR
FGLNAFKVLGGSYSMGRYLAQRLDTDISELGYDKLTSKEIKEKLGEITFFTATDGNHGRGVAWTANKLGQ
KSVVLMPKGSSEFRLNKIKGEGADASITDLNYDDAVRLANDYAEADDHGVMVQDTAWDGYEEIPAWIMQG
YGTMAQEAIEQLKEYGVDRPTHVFVQAGVGSLAGAVQGYVASIYDECPITVVVEADEADCYYKSAEAGDG
KPRFVGGDMPTIMAGLACGEPNTIGFEVLKNHAAAFVSAPDWVSAKGMRTLGNPLNGDEKVISGESGAVT
TGLLVAAMEREDLADLRKDLKLDENSRILLISTEGDTDPDKYRSIVWDGEYPSI
>gi|260687346|ref|YP_003218480.1| putative iron-sulfur flavoprotein [Clostridium difficile R20291]
MAKILGICGSPRKGATEYAVLEALKEAETIPGIETEYWSVRGKKISPCVHCDACIRKETMCIIKDDIQEL
EQKILEADGIIVGSPVYDMNITAQLTAVFNRLRPMYLVHPGKLQNKVGAAITTGGTRYGGQELTKLPIIN
FFLMHEMLVSGGLGGCYIGGTIWSKDGKAKGAQEDETGMDTVKRLGKGAAEAVMVSKFGLEKWNVVKEEL
DVKKDEKSPLRDH
>gi|260687347|ref|YP_003218481.1| putative xanthine dehydrogenase [Clostridium difficile R20291]
MEKVIGKSYPLKDAALKVTGQMKYVADMKPQNVLYAKMLLSPVAHAKIKSIDTSEAEKVVGVRAIATYLN
TSQRKYNGSLRFYEHNIPENEVIFSDTVRFVGDRVAAVAAETPEIAEKAVKLIKVEYEELPAVFTIQDAI
KEDAICIHGDSNIVSQNNINGGDVEKGFKECDYIFEDEYSTPAIHHSAIETHSVIAHYDYNDKLTVHTPC
QNTFGFRIILSQIFGMSLNKVRVIRPAIGGSFGGKLELTIEPVAAALSKMTRRPVKMVLTRKESMISTRT
RHGSFVKLKTGVNKDGEVIAQDIKIYTNTGAYASSALNVIGALSHKVFKVYKIPNIKFTGMPVYTNTPIA
GAMRGYGSPQIFMAQQAQFAKIAKEIGMDLVDFQNKNAVEPDDVDIIFRGSLGNPRVLDCIEQGKKMFKW
DEKKKLPKEEGKYLRGIGMAIGAHGNGVFGAHRDVVTLTLKLNEDGTLTLLTGAHDMGNGVVTMQTMMVA
EVLGITPDKVDTFETDTDACTFNLGDYASRGVFVEGGGAKKTAEKLKNLIVEEAEKLLETSKEDLYLDNG
YVISKLDENVKASLSDVAVYSQSKSLRELTVVEDYSSPAGLTSYGVHFAEVLVDKETKDIKVVDFVAVHD
VGRVINPLNLEGQLEGGIHMGLGYALSEELAFDEQGRPKATDFKTYKLFRTVDMPKCQVAFVNSYEKAGP
FGGKSIGECAVVPVAPAVANAVYNATDVEIHSLPIKLK
>gi|260687348|ref|YP_003218482.1| putative carbon monoxide dehydrogenase, iron-sulfur-binding subunit [Clostridium difficile R20291]
MEKIKLNINDYMYEIEVEKNETLLHVLREKLNLTGAKQGCNSGSCGACKVLIDGVDMKSCKLLAKNCEGK
VIYTIESFANGENLHPIQEAFIEVGAVQCGYCTPGMIITTQALLNRNASPNEDEIKEAFKENLCRCTGYV
KIIEAVKLSAARLGGR
>gi|260687349|ref|YP_003218483.1| putative amidohydrolase [Clostridium difficile R20291]
MKVFKGGFKMIDILIKNAIIVTVNKDRDVIFDGAIAIQGDRILDIGNTVDIEPKYLDAKKVIDANGKVIF
PGFINTHNHLFQVLLKGLGDDMALHEWLNTMMFPSAKFLTEQDTYDAAMLGCMEGLKSGITTMVDYMHTH
NRPGLTDGIVKAYKDLGIRGVVGRGCIDLGIHKELIEDVETVEKDLRRVFEKYHNSENGRIKICVAPSSM
WAISEEMGKMLWNIVKEYDSYFTVHISETEFARTATKDIHGEIDIKLLEKWGIVGPEVVAVHCVCITDED
MEMLKKYDIKVSHNVASNMYLASGVAPVPEMLKKGINVSLGLDGAASNNAQDMVELMKLTALQHKVNNCD
PLAISAEKVLEMATIEGARTLRMEDEIGSLEIGKKADLVIFNSMLSPKSIPLHNPVSTLVYSASMHNVES
VLVDGNVILENGKVTTIESEEQVLLNAQLAAEELCKRANVTNRMEGHKWNSLY
>gi|260687350|ref|YP_003218484.1| putative xanthine/uracile permease [Clostridium difficile R20291]
MYGRIYFMKTRNTSKYDVDGIPPLKESIPLALQHLLAMIVGNMVPAILIANVVGLNQGQATMLIQGSMLA
AGLATFLQLYPIPLFKGFKLGSRLPVMMGMSYVFLGACLSVAAKDGLAALFGAQIAAGVIVFFVGFGVKK
IRHIFTPIVSGTIIACMGLGLFATAIKNLAGGEGTQTFGSPINFTVGVIVAFVIIMINKYGKGLVKNSSI
LIGILVGYAISLVLGLVDFSAVQGAAIVSLPTPAAFGLEFRPELIVMFTIIYIIGIADMMGACTIATVGA
MDREVTDEELASVVLGNSITSIISSLFAALPTGVFSQNTVIVSMNKVTSRFVIALGALVLLLAGISPALG
AIMTTIPSCVVGGATLVVFSSIAMSGFSIMSMDGFTEENNLIAGVSIATSMGLTTAPQVLDQFPETIGTV
LGGSSIVSGAIIAILLQTLFKLKSRKSAENVTSNLEENIG
>gi|260687351|ref|YP_003218485.1| putative xanthine/uracile permease [Clostridium difficile R20291]
MITLSKYQKNVSMFDIDGRPPILKCLPLSMQHILAMIVGTVTVPIVVGGAVGVSPTQITLLVQYALIIAG
ISTLIQLYPIGNIGSRLPIIFGVGFTYVPTLVAVGGNYGLASILGAQLIGGVATVLIGIFIKKIRKFFPN
IVAGTVVFTIGLSLYPIAINYMAGGVNSPTYASMQNWAVAAITLVVVIGLSQFAKGYAKLAAIFLGIIVG
YCVSLVLGIINFDPIREATWFAIPKPLEFGMEFDMPVIISVVIVSIINAVQAIGDLSATTMGGMDRNITD
KELSSGVIGSGICTMIGALFGGLPPSSYSQNVGMVAMNKVISRFVLGIAGIFMLLSGFVPKFGALMTTIP
YSVLGGATISIFSMITMTGIKLIITEELSSRNITIVGLAIALGMGITSVPAAQEAFPSFVKLVFGESPIV
IATLVAFVLNLIIPNKSLEDEAKERAVMEETN
>gi|260687352|ref|YP_003218486.1| putative sigma-54-dependent transcriptional regulator [Clostridium difficile R20291]
MDKHSDSVMYGGMEVYNIWGTTTVDSIIGESDVMRALKNRICKIGNSDSTVAITGESGTGKELIARAIHL
AGNRGNKTFVAINCAAIPEPLLESELFGYTKGAFSGADSKGKIGKFELANGGVVFLDEIGDMPIQLQSKL
LRVLQEKKFTRIGSNELIDIDVRIISATNRDLFELVKENKFREDLYYRLNVIPLEVPPLRERGDDIQILI
NNFIDKYSRKMKKNVYHIEPDVEQMLLKYPWPGNIRELENTIELALNLLEEDGIIHKGIINRKILEYFKL
NNINIKLLEESDYEISMEQDILTLEEFERAYIKKVLKFYGNDTKSKKLAAKKLGISLATLYRKIDV
>gi|260687353|ref|YP_003218487.1| hypothetical protein CDR20291_2000 [Clostridium difficile R20291]
MSKNIYVKETYEWIRVGNGENELTEIEYEKLLKYLENNNDVLKSNIIDIKYKKIRFINYVGIICFENVIL
EILPKLSLSDNLVKDREILLQMLSICNKIPITMNEKIRLSLKNYNLLNFFVMYFIESMQTQMKKGIYFEY
INKIENLNVMRGKILLSTYAKEKGISPMKIRCEYDECSENNFLNQVLKKACISILCRINDNSIQGKIKKI
LSYFQNVDLIYIDRKKLLGYKFYKNNDRFKDCYLLARLLLLNLSMDNSQNNQEAFSILFEINTLYEEYIG
ILIKSIWDNSFRETYIQDKSKFLLKNEQTGKKNFNLRPDIVLYDLKNEYEIIIDTKWKAIEVDSNVFYRS
SDIYQMYAYITAYENAKRCILLYPCIQKDKNYSSWKLSESFKGKFIEAKTVRLDDIKNTKNDLKKIIFNY
KF
>gi|260687354|ref|YP_003218488.1| putative restriction enzyme [Clostridium difficile R20291]
MSENIRGTEYWLMEEFFYQETDTPQIFIEESIIALGFDIKINLKKVFSMGKKSEKYINENCNDKDFIKKF
MSIKKGDYFLYKAYQNIEEKVKCNVSIGIVEEDFENGYELSHILGHTLPVKWMHNFDTVSNCKVYTSEFY
KLNNNDISSYLEIIKSQDKKLLRKRIEESENNKWYLKNYYYKNVDKCVDDEELFIQPINLEQLESLKNIK
TDDYILLYNSEKVICENDHTMKSLFGVCQVMEGFDKEKVSALDGGYFFPVRWIEYGKENIDGNAWVIFEN
NSIVEKYVKRFTNKMPLNTILYGPPGTGKTYNTKQMVYNLVSETSLRNKYYTGYLDYKNNVEFCTFHQSY
GYEEFIEGLKSDGEGNFKPEDGILKDISIEACYNALKFEKKMSFELEKDSLTLETIKDRKKKLVLENIEY
SESFNFEESENYVLIIDEINRGNVSKIFGELITLLEDDKRLTKSNQTIVKLPYSKEKFSLPPNLYIVGTM
NTSDKSIALLDIALRRRFNFEEIMPDYDLLSIVDGIDIRKMLYTINKRIEFLYDRDHVIGQAYLLAVENI
NDIVVVFRSKIIPLLQEYFYYDSEKVGLILGGIGRNEKDKYIVYKEKLIASELFKNNNASIMESKVNYCI
KQNISSEELKNIYE
>gi|260687355|ref|YP_003218489.1| hypothetical protein CDR20291_2002 [Clostridium difficile R20291]
MENFNKNAKIIGIGVEGINIINEVEEKIKANMDIEKININQEIEKEYVRSLLDGVDILFLIYSSEDKHIR
DIIKAVSYMSNERRVLSIGMDCSEKENKEDLELGREFKINNDSIFKFVDLMNIMVESISDSCMINIDITD
LKEAIVGDKGIKYSFEEFEDTKSYSEIADILFDRMEYIGEEFISKKGIVFVEGSPEFSIMELNDLISNIQ
SKVEESYEVIFSLYIKENLNGNIRVGLLYN
>gi|260687356|ref|YP_003218490.1| hypothetical protein CDR20291_2003 [Clostridium difficile R20291]
MKRGVYLSKVKRLTDVWIYINDKQKFTIKELSEEFNLSAKTIQRYLKELNKMGLPIQAEQGRNGGYRVLN
NSYIPPVIFTEKEVMIILFALKSLQIYNYKLMEIEINSIMRKVSYERKSSIKVGIENIKRYIGFVANDTN
DGDFKSSNVTEFFRASSESLILNIKYKCGNQILEKNVCPIGIYLNKGAWFSPAYDCKSDKIILVHIDNII
DIKRTGESKKIHINLEEWLHEVYNNLYGNSSTTKKFGEIIYLNVLLTKEGVSKIKDSSWNLDMELNEDGS
GIISTFIKVEDIDCYASILFFIGNNAKVIEPKFLNKLLYDKANELRYFYEENMV
>gi|260687357|ref|YP_003218491.1| hypothetical protein CDR20291_2004 [Clostridium difficile R20291]
MRKNSINIALTAAITAIYAVLTLSLGFISYGPIQFRVAEIMMLLAFLDKGYIVGLTLGCFLANVIGPYGV
PDIISGTLATFISASMIYITRKLGKQNKSTLVIASLWPTVINSIVVGLMLNVFFGLPLILSMIQVGFGEF
VVVTIVGVPFFCFLMKKYKNVINIKF
>gi|260687358|ref|YP_003218492.1| hypothetical protein CDR20291_2005 [Clostridium difficile R20291]
MAGNLNNMRAVNNFRGDKNILECLVSFEGRSISQRKVRVFFKEKQNQIEIDFAEEEISKLVENVVLNTSY
QEMLYDEIEKQLEIDCIGTWMILSKLKDGSRVH
>gi|260687359|ref|YP_003218493.1| putative molybdenum-binding subunit of oxidoreductase [Clostridium difficile R20291]
MNIVGKGIKKIDGMSITTGKPVYTDDLSAKNALVVKILRSPHAYAKIKDIDTSKAEMVDGVECVLTYKDV
PKSRFTLAGQTYPEPSPYDRLILEDVVRYVGDEVAIVAAIDEKTAIKAMNLIKVKYEVLTPVLDFEEAIG
NKTMVHDEDRHCNFDIGMQREKNIVSHHDYTKGDVEKVLSNCDVVIEETYYTQAQAHAMMETYRAYNYLD
HMGRLVVVSSTQIPFHVKRHLSRALEIPASKIRVIKPRIGGGFGGKQTACVEIFSAIVTLKTGKPAKIIY
DRKETFNCSTSRHAMRLKVRLGATNDGIIKAIDIKALSDTGAYGEHASTTIGLVGEKTLPMYNKVEATRF
IADVVYTNKMPAGALRGYGASQGCFAVESTINMLANKLKMDPTDLRLKNVVTEGETTFAYGKTLNSVDLI
KCINKGKELIGWNEKYPCKHLDNGKIRSVGMAITMQGSGIQGLDKSSAEIKLNDCGDYTLMIGSTDMGTG
SDTILAQMAAEVLDTSIENITVISADTDLVPYDPGSYASSTTYVTGMAVVKAAQDLREKIISAGATKLGV
EKDEVEFDGIKLTSKKGSTLLFDIAVDSTIGPDTNQLIGLASHGSPVSPPPFIAGFAETEIDTETGKVDL
VNYVAVVDCGTVINKNLAKIQVEGGIVQGIGMALFEEVRYTEKGSMDTNTFMQYKIPARCDIGNVKVDFV
ETYEPTGPFGAKSVGEVVINTPLPAIQEAVFNGIGVRINTLPITPEKVFMEMNK
>gi|260687360|ref|YP_003218494.1| putative [2Fe-2S]-binding subunit of oxidoreductase [Clostridium difficile R20291]
MLVKININGKKKSVDIEPEEYLVDTLRKVGNLSVKRGCDTGCCGLCTVLIDKKPTLSCATLTLRALDKEI
TTIEGLENEVKEFSEVLVKEGAEQCGFCSPGFILTVLAMKDELENPTDDEIKHYLTGNLCRCTGYMGQLR
AIKTYLEVK
>gi|260687361|ref|YP_003218495.1| putative FAD-binding subunit of oxidoreductase [Clostridium difficile R20291]
MFTVMDIVQPDTVEEAYSILNKRKTNQVIGGSAFLRMGKKRIGTGIELSKLNLDYIKEYEDYVEIGSMTT
FRTLETSSIIKNNFGRIIEDSVKNIIGVQFRNVVTVGATVFSKYGFSDLIVALLSLDTEVELYNIGRISL
EEFLNRDYEKDLLIKIYIKKTNKNASYKSLRNAKSDYPILNVSVSKHMEQFKLCVGARPQKATIAKQASE
FLSNNEINEINIDKAVEIASEELTFGSNMRASREYRKAMSKVLLKRAIMEVI
>gi|260687362|ref|YP_003218496.1| putative Na(+)/H(+) antiporter [Clostridium difficile R20291]
MEASIHTIASNNLLIIFAIVSITGIICSKLSEIIKVPDVVLYLLVGILIGPSFLKFIDIRGFQIENQLIL
TFGSAFILYLGGKEISLKVLRNVKISVFLLATLGVVISAFIMQQVIGFTFGISAMTALLAGTIIASTDPA
TLVPIFNQVKIKDRVKQTVISESAFNDATGAILTSAVLAVILSNKFSLGENIYELGTMVIVGVLVGLITG
ILLLKLVNDKPYGIFKDFAPIISVISVVVAYELSTKLGGSGYMSCFIVGIITGNKKNFKIWLSQKSYDAD
FYVAETLGTICRMAIFIILGSQVNLAQLSKYFMPSVITVLVLMFIARPLCVLVCTLVDREAKWSKSEILF
MMWVRETGVIPAALCGIISAMKVPGYEVISSVVFMTILITLVIQGSTTKLVAKKLGLLEEEVINISEKVS
TF
>gi|260687363|ref|YP_003218497.1| putative ABC transporter, permease protein [Clostridium difficile R20291]
MRKLSKREKDFIQYGFLLFLICITTYLVLTTLDIKLIPKIIRLVNKTYIFLGILTIIVYMIIESIVTHLI
INAVQKTKVKFIGIKMATMGFYYNLVTPFASGSQPMQIYALTKYDVSLSKSVAIVTNKTVVFQSTVTVFC
GILILLNKSLLMEQVHSVKVLITFGMIMNVSMLLGGLLIVFSPKQVKMIAEVLINFLSKFKTFKFLDSKR
DRINHYIDDYNYSIKIFIKNVRILVLSILLTVLQLIAYFSIVYCVYKASNLRGVSYVHIMTLQVFLYMAI
SPIPTPGNVGANEVTFFTMFSNIIPKELLGYSVLLYSGFVYYFILIVSGLFTFGTHYTLNSWKKEDKVNS
NLDKVIEKLN
>gi|260687364|ref|YP_003218498.1| putative ABC transporter, permease protein [Clostridium difficile R20291]
MSNLSILIKTNIINEFKLNALKKADSREKQKIMGMILSVVIITGLLIFYVTSISLSLVDILKQINQMEML
LIFGFGLSTLTTIVTSLYKTSSYLFQAKDLDLLTSLPIKESTVLASKILMLVGANYLFSSICMIIPAVVY
FFNSDVSITYFPYLILLFLALPLLPIVASSIIFMFIGQISSRIKYKNLILIIGSIILMLLYTLLMTRLNS
MSVEMLKNSVSISETIRKIYPPIYYFVDALKTGSVVSFLAFIAISIIPFFMFVTLFAKKFKDINAKMSEG
YKSKTYKFKSQKTSRPSKALLKKEFKRYTSSFIYFLNSSAGLLFLIIGTILILLFGADKVGELLKLNIDF
NFIKIQLLGVFFFIIVMNCTTYCSISLEGKNLWILKSSPIDEREIFWSKILMNFLLNAPLSILCLILVSI
RLGFEIQFIIVSICLIASFSMFVALMGLLSNLLYPNLDWKNEMAVVKRSASMIITMLVSLAYVIILGGIY
VLLGISFLNIYIILASILTFILDFMIWRIISTKGVRIFKNL
>gi|260687365|ref|YP_003218499.1| ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MFDICYILYITNIKTIIWREIMLKVINVSKSYKNKKVVSSVSFDVNDGELFGFIGHNGAGKTTTIKAIVG
IHDFEEGEVLINSKSIKKQPVECKKEMAYIPDNPDLYESLTGIQYLNFIADIFEVAKDKREELIKYYSNK
FELNKALGDLISSYSHGMKQKLAIISALIHSPKILILDEPFVGLDPKASFILKEIMREFCDKGGCIFFST
HVLEVAEKICDKIAIIKDGNIIAYGTTEEVKGSNSLESIFMELIEK
>gi|260687366|ref|YP_003218500.1| putative ATP-dependent RNA helicase [Clostridium difficile R20291]
MNTFEQLKISSTLIDGLKKQDITSPTEVQSLVIGNIIQNKDLLINSQTGTGKTLAYLLPIFEKIDTSKRE
TQALILAPTHELVMQITNQVELLAKNAELSVTSLALIGEVNIQKQIKNIKAVKPHIVIGSCGRVLDLIKQ
KKLKSHNIKTIVLDEVDNLLNGKNITCIEDIIRTTLRDRQIIGCSASLTDSTIKICDKLMKEFEIIKTKE
KSQINPNINHSYLLGEIRDKFTFLRKALAATNPKKAIVFVNNEKNIEVLVSKLNYHNYKAIGIFGNMEKE
DRKNAINKFKLGKAKILITTDLSARGLDIVDVSHVFNLDFPKSKNEYLHRCGRTSRGNRSGNTISIITKK
ELDIIKDLQKEFSIVITPKTLQNGELIDIIK
>gi|260687367|ref|YP_003218501.1| putative xanthine/uracil permease [Clostridium difficile R20291]
MQTTNSSTMQKLFPILTNKNVDMKKEIIAGVTTFLTMAYIIAVNPNILSETGMPAGALVTGTCLAAAFGC
ILMGVVANLPFALASGMGLNAFFAYTVVLQMGVPWEVALTAVFVEGIIFIVLSVSGVREAVVNAIPKNMK
LAVTGGIGIFIALIGLVNSGIVIGDQATLIKMGRFTPAVIITCLGLIIIAVLDKKRVKGSILFGIVVSSL
LAWAFAFMNPEYAQKLGIYLPGGLFKFESLAPIAGKIDLGYVLHPTNIGGFLVVVCTFLFVDFFDTVGTL
VGVCSKANMLDEKGNVPNVGRALLTDAVATTVGAGLGVSTVTTYVESSTGVIAGGRTGWTAITVGILFLA
AMFFSPVFIAIPSCATAPALIYVGYLMLGTVKDIEFDNITEGVPAFVTIACMALTYSIGDGLTLGILTYV
FVNIFYNIFGAKKAEDKKHVSVVMIVLAILFIIKLWLL
>gi|260687368|ref|YP_003218502.1| putative drug/sodium antiporter [Clostridium difficile R20291]
MKDLTTGHEGKSIFFFAMPMLIGSLFQQLYNTADSIIVGRFIGKEAMAAVSGANPIMFLLVAALMGVSLG
FSILVSQFYGSGDLKKVKATIDTTYILLFIGSILISILGIVFGGPMLKLMNTPESVFAQSKLYLTIIFSG
ILFSAGYNSVSAILRGLGDSVTPLYFLIIATILNIVLDLTFIVVLRMGVEGVALATIMAQAVSFIISIIY
LNKKHEVLKFKIKGIVYDNKIFKDGLRLGLPSGIQQMLFSIGNMTLQFLVNSYGTSAMAAFGAGLRIENF
ISLPIMNLGSAVSTFVAQNIGAGENERVKKGIRESIKMTLVLAVTVIALILLFRENLIALFNTDKDVIKI
GSSYLFIIGPFFLFIGTSFVLSSAMKGAGDSMFALISSIVSLWLGRLPASYMLSKFFGTDGIWMGIPFGW
TLGLIVTVIYYKKGYWKTKAIVNHRINE
>gi|260687369|ref|YP_003218503.1| putative sodium:sulfate symporter [Clostridium difficile R20291]
MEVNIKMGIILKPKQFYMTVIVTIILYFSLNYSFNIKFSICLSFLTILIWAVDSVEKTFVALFFVILAFI
FNIAPIKVILQFLFTENFYIIILAYIITNAVTKTGVAKIISEKLILNTVNTPKKMILLSYILGILLIFFI
PQPFPRVILVSAFYKEFLKEQQITEDSKSILLFSIFTASTFTSMFFVNGDTLLNYVVLELGNCNINWGQW
AFYMSVPTIITCFITYFLFIFVFKKELHSIKFISNENLEGNKLHFSYSNLKKEFNLLNKEQKHVFLCLGI
MFFMFLTQFIHNINTLIIMSICVLLLLLRKIVGFSTLKEINWKVLIFFIAAFSIGGVLKYSGVVDIMGNY
LIKFIPNSSEIISILFLITLTIILNICLGSAVTTSSVVIPLLGSLHILKENSVTLCLFVYIIVSIQYILP
FHHATIMVGHGENLYNSKVIFKYGLTLIPLTYFIIICITFPWWKFIGLEI
>gi|260687370|ref|YP_003218504.1| fructose-6-phosphate aldolase 2 [Clostridium difficile R20291]
MQLILDTGNVEEIKELCTCLPIDGVTTNPSIVSKEKKNFKQLINEIGEIIGEDMPIHAQVLSTKYEEILD
EALYISSLRKNIYVKIPVTQDGLRAIKDLHRKGVKITATAIFTAHQGFLAAKAGANYIAPYVNRLDNISG
DGVAMVSELIKIIDTYKMDTKVLAASFKNAQQVIELMQHGVHSVTVPYDICKSMMNHPLTDWSVDKFIED
WENTFGKGSKTNNI
>gi|260687371|ref|YP_003218505.1| DeoR-family transcriptional regulator [Clostridium difficile R20291]
MFAEERIQAILNILKKEGRVTVKELSSKFNVTEDCIRKDLKNIEKISSIRRIYGGAVLARETLENQDTKD
RKEINIPTKKIIAEKAFNLIEDRETIFLDISTINILLAKLLAESNKKVTLVTNMLDILNVVTSKPNNLNI
ISTGGLLNLSLDGFVGTPTIEFISKYKFDKTFMGSCGVDVFNSSLTTFEIEDGLTKKAIINSSKKVFIVM
EDKKFKFDGNFKFAHLEDISSIITEKAPTPDIVDILSEFNVNVL
>gi|260687372|ref|YP_003218506.1| hypothetical protein CDR20291_2019 [Clostridium difficile R20291]
MILQINICTLGKINIGSIIFTEEVVLMDRLKRDMKNMKEDLKEGVKKTAYVMKNTAEDLKDDAQGAMVNL
EMKKDEMMERYEQKKFSKELEKQMKNEMK
>gi|260687373|ref|YP_003218507.1| two-component sensor histidine kinase [Clostridium difficile R20291]
MRRIFDKWEKLSIKYKLFSITTSLLIALALIIYLILYFLLPSYYHEYKIESLQESLKSLVDSSIHFDTYT
LEERLYYMAKDQNLAILLKDNQGKIVYGKNEVVILRYSKYMINSLEDEYRTSIPIYTKDAKDGPYTLELV
MPLQPIDEANEVIRKLMPYIISIAILIAIIGAYIYSIVITKPLINIIESEREQEYRRKDFVATISHELKT
PITIISGQIEGMIYSVGKYKDRDTYLKKSYECTQELKDLVNEMIEVSKSEILEKDLKLVSINISELLNRL
VKRQVFLIEEKHMKTILKIEENLEIKADQERITKAINNIINNAIKYSPEKSELIIRLYDKNKRISKKTSN
QRVVLEIENTGVTIEKRYLEEIFNPFYRIEKSRSRKTGGSGLGLYIVSQIFKSHGFDYSIKNKENSVVFT
VEFKN
>gi|260687374|ref|YP_003218508.1| two-component system response regulator [Clostridium difficile R20291]
MNSSILVIEDDSNIQELISEFLSAEGYQVDTANDGLEGIQKFKQGSYDLVILDIMMPNLDGYGVCKMIRK
SSSVPIIFLTALNDEGDQLKGFDLECDDYITKPFSFNLLIKRVEAILRRSNKTINDKFIVFEKLKLDLNT
YIAEIDGEPIELTLKEFNILKALIEKYPQVITREGLLDSIWGYDYYGDTRIVDAHIKNIRKKISLPYIKT
VKGIGYTLEKDI
>gi|260687375|ref|YP_003218509.1| putative copper-transporting P-type ATPase [Clostridium difficile R20291]
MSSNKVVESYKITGMTCAACAKAVERVTKKMDGVYDQSVNIATEKLKIEYDNSKVNFDDIKQVVEKAGYG
IIKEESNKKIDMKIDGMTCAACAKAVERVVKKLDGVESISVNIATDKANIDYDPSKVKLSQIKAAIEKAG
YKPIEEVRNKVDVDEDKLRKEREMKSLFVKFIVAIVFAVPLFYIAMGPMIIKPIGPWPLPEIINPMTNTF
NYALIQLILVIPVMIAGYKFYINGFKSLFSLSPNMDSLVAIGTLAAFLYSLYTTLQIANGQIQGMHHHQL
YYESAGIIIALILLGKYLESKSKGKTSEAIKKLMGLQPKTAIVLVDGKEVETPIEEVEIGDILLVKPGTK
IPVDGVVIEGYTSVDESMLTGESIPVEKNVGSKVTGASINKNGVIKFKAEKIGGDTALAQIIKLVEDAQG
TKAPIAKLADTVSGYFVPIVIAIAVVASLLWFLIGGKDIVFVLTIFISVLVIACPCALGLATPTAIMVGT
GKGAENGILIKGGEALESAHKVNTVIFDKTGTITEGKPKVTDIVLNNNVKEEYLIKIASSAEKGSEHPLG
EAIVKYGEEKNIKFEKVDNFKAIPGAGIQVTINDESILLGNRKLMNDNNIKLGDLEEKSNVLASQGKTPM
YIAVDGNLSGIIAVADVVKESSKKAIEILHDMGIKVAMVTGDNAKTANAIANQVGIDMVLAEVLPEDKSK
EVEKLQNQGKFVAMVGDGINDAPALAKADIGIAIGSGTDVAIESADIVLMKSDLIDVPTAIKLSHETIKN
IKQNLFWAFGYNTIGIPVAAGILYVFGGPLLNPMIAAAAMSLSSVSVVSNALRLKNFKAYKRD
>gi|260687376|ref|YP_003218510.1| GTP-binding protein [Clostridium difficile R20291]
MSQKHKIINIAVIAHVDAGKSTLVDAFLSQSGVFRKNEVVKDCVMDSNDLEKERGITIYSKNCAINYEDY
KINIVDTPGHSDFSSEVERVMKTVDTVILLVDASEGPMPQTRFVLQKSLEFGLKPILFINKIDKKDQRAE
EVVNEVFDLFVDLNATDEQCEFPIIYGIAKQGIAKLEMDDDSEDLSPLFKTIVNHVEAYPNYDNEPLQFQ
ISALAYDDYVGRLGIGRIYKGTLKNNTQVAICREDSVVSKGKVSKLSVYEGLKQVEVDEATSGEIVVIAG
IPDISIGETICDLDSPLPMEMIKIEEPTLSMNFLVNDSPFVGKSGKFVTTRHLKDRLEKELEVNVGLKVE
PLDTTDGYKVSGRGELHLSILLENMRREGYEVGVSKPEVLMHKEDGKLMEPIERVVVNCPEVYSGTIINE
LNMRKGMMESMSIEGDYVKIEFLAPTRGLLGYRSEFINATRGEGTLVRSFEKFEEFKGEIPSRGNGVLIA
QGPGVTMGYSLNALSDRAVMFVDPGVEVYEGMIIGMNSRKDDMVVNPCKNKKMSNVRASGSDDAIKLSPP
RIFTLEEALEFIEDDELVEITPDSIRLRKRFLNEHDRLRYNKSRQGK
>gi|260687377|ref|YP_003218511.1| thioredoxin reductase [Clostridium difficile R20291]
MVDIIVIGAGPAGLTSAIYAMRAGLSVTVFEKNIYGGQVASTSEVENYPAVQKISGVEFSNNIYNQAVAQ
GVDIQFDEVEEINLEGKVKVVKTSSGEHKAKAVILANGVERRKLGCAGEQEFTGRGVSYCATCDGAFFKD
KEVAIVGGGNTALEDALFLANNCTKVYLIHRRDSFRGEEVLEKSVKARENIEILYSHGVEKIEGEKTVSK
IEVKNLKTEEKRTIDVSGIFIAIGLKPNNKMFENVLDLDEGGYIISDESCTTSVEGVYVAGDSRTKFLRQ
IITAASDGAIAAVQAANYINVE
>gi|260687378|ref|YP_003218512.1| threonine synthase [Clostridium difficile R20291]
MYYSSTRGTEEKVTASQAIIKGISSDGGLYVPSEFPNVKNELINLVNLTYSQIAFFVLSKFLCDFTEDEI
KNCIENAYDEKFDCSSIAPLNKVNDTYFLELYHGPTLAFKDMALTIMPHLLKTSIKKDNLEKDVVILTAT
SGDTGKAALEGFKDIDKIKIIVFFPEDGVSPVQKLQMKTQTGKNTYVVGIKGNFDDAQSGVKKIFSDKKF
NQKLLDNNYILSSANSINIGRLLPQVAYYFYSYMKLVSNSEINLNDKINFVVPTGNFGNILAGYYAKQMG
LPINKLICASNDNNVLYDFFKTGVYDKNRTLKLTTSPSMDILISSNLERLLFEISNRNTDIVNKLLSDLS
DKGVYKISDDMEKNLASFYGEYSNEEEVKSTINNVFKNYNYLIDTHTAVAYNCYEKYKKETSDNTKTVIV
STASPFKFSEDVLKSIDCDFKDLDDFAIIDRLSSISKIDIPKPIKNLKNAEILHKDIYEKDELKLAIKKF
LKV
>gi|260687379|ref|YP_003218513.1| homoserine kinase [Clostridium difficile R20291]
MLEIIVPATSANIGPGFDCLGIALNIYNKFYVEEIESGLEIEGCEDAYKNENNLVYTSMKYFFDRVKPEK
IPAGIKIKIHSEVPICRGLGSSASCIVAGVIAANALSGANLDKNQLLNIASEIEGHPDNVAPAILGNMIV
SVTDNENIHYDIIKIPEELKFCAMIPNFKLSTEKARGVLPKEIPYSDGVFNVSRVALLISALLNKNFDLL
KVACQDKLHQNYRGTLIENYNDIVEKSEQLNSIGVFLSGAGPTIMSLIKENDDSFVDNMKNYLQKLKSDW
EIKELCCDSNGAVLNII
>gi|260687380|ref|YP_003218514.1| putative 2-nitropropane dioxygenase [Clostridium difficile R20291]
MGVGISRSSLAGAVAKLGGVGVISGVQIGYDEEDFETNTINANLRAIKKHISKAKEISNGGIIGINFMVA
MKEYETYVKEAVKAGVDLIISGAGLPNKLPSLVKGSNVKIAPIVSTAKAANVILKMWDRKEKTTADLIVV
EGPKAGGHLGYSNEELDNIDSIDYDKEFVEILKVANTYGEKFGRNIPVVAAGGITSSSDVKKYIDMGASG
VQVGTRFVATYECDAHENFKMAYINASEEDVHIVKSPVGLPGRAIRNKFIEEVKINRPEIKKCYNCLIPC
NPKETPYCISQALINAVKGDVENSLLFCGNDAYKIDKLSTVEDVINELISEL
>gi|260687381|ref|YP_003218515.1| hypothetical protein CDR20291_2028 [Clostridium difficile R20291]
MSDFKEILAEEIKNNPFGLIGKDWTLITAENEGKVNTMTASWGGLGVMWGKDVAFVVIRPQRYTKEFIDN
TDKFSLTFFDEDFRKELSYCGKVSGREEDKISQIGFNIEHLNDTPYFKEAKMAIICKKIYSQKLEPQCFI
AEGIDGRWYPQKDYHTLYIAEITNVLVKED
>gi|260687382|ref|YP_003218516.1| putative cations transporter [Clostridium difficile R20291]
MIRYYKTIDSKLEKLSFFEDGCWINLVEPNHSEINEISNLLNIDVESIESALDEEERSRIDVEDNHTLIL
IDIPVDESDSNSSHYTTIPLGIILTEEAIVTVCDAQTKILNDFIVGHIKDFFTFKKTRFLLQILHKNAAY
YLHYLRKINKMTIIIEREIYKSMKNKELVQLLELEKSLVYFSTSLKSNELVLNKMVRTAGIKKYPDDEDL
LEDVIVENRQALDMAKIYGDILSRIMDAFSAIISNNQNNVMQILTVVTLIFSIPTIISGFFGMNVINMPF
SNNPNGFWIILLITSIICIVITFFMSRNKLL
>gi|260687383|ref|YP_003218517.1| putative multiprotein-complex assembly protein [Clostridium difficile R20291]
MGKMESAIELYKSAALDNYVKSQYTLGNIYESKKQFKEAEKWYSMAYKSGSEDAAFDLGNMYYKLDGYEY
AIYWYEKIANLGYLQAQNNLGVCHFKMKDFVRCEKWLKTAADKNLGKACFNLGVLYTFLEKDDEAYEYYK
KGSVLLDDDAKYNLAILNGKKKDNKSTVSLYKQLYKSGHMKGCFNLGMIMEINDNLEDAEKYYKKSADRD
DVKSEYRLAYVYDRKEELGDAIYYYEKAIEKNHTLSKYRLANLYNRENEIEKAKTYYKMAAEDDITEAKN
NLAGIYFEEKDYENAIKYYEDAIAVGCKSSLENLGDLYYQNQDIEKAISYYSRIPNNASCQIKLGNIYED
LNNIEEAISWYKKASENGDTRSSYRLGCIYESLGNTKNARKYFEMASSKNHMNARIHLGRIYFREGKLEE
SKMMFDTPANENNVYAQHMVGLIYDMFYKDYVNSKFWYEKARAQGCVESIYNLGQIYLKLNDDAEAEKYY
KEGIKYGSKKCEYMLAGLYYKKSLDMYISLANEEYDNCEEIVEGFPNLNIDFDEVLIPPFKLQEEVIDEE
EYVPIYILNIKESLDSMLEGLETEMIIDEEHDS
>gi|260687384|ref|YP_003218518.1| putative transporter [Clostridium difficile R20291]
MNFSNIFIQVAVLFIIILVGYFVRKFNLLDDHCTSKLSTLTMTVFLPSMIISSMQINFDSKMIQKILLLL
FTSLIMYIVSIIIAFLLKYILKCNDKKDLGIYQYIVVFSNVAFMGYPVIEAVLGHEAIFYTAIFNLPFNL
FSFTLGIYLLSKGSTSRGFSIKSLISPATIAIVIGLFLFVTGLRLPQFINEPLEMLGSITTPISMIIIGS
LLANSSALDCFVNKKLYIVTFIRLLVLPVIVYFILKGWINDKMILAIPVVISSMPAAANTAIMANQYDSN
ITLASQCVFFTTLFSVISIPFISILLLS
>gi|260687385|ref|YP_003218519.1| putative acetyltransferase [Clostridium difficile R20291]
MFEGESNMSKPIDITIRPIRREDAQAFNEIRRTYSVMRNTLALMSDRVDKTEAMLASLGENDYMFVAETN
NNGEKDVIGFAGLHVNSSPRLRHSAEIGISVAENYQGRGVGKKLMEQLLDIADNWIMLTRVGLEVIVDNE
KGLNLYKKLGFEIEGTKKYAVIRDGKFEDVYIMGRYNKNLI
>gi|260687386|ref|YP_003218520.1| putative membrane protein precursor [Clostridium difficile R20291]
MSKKTKYFSLILFPIALLLNFIASKVPNIVEKYYSQFIDKIIVQILSKVSGIFPFSLYEITMYIIVISIF
LFLCCTLSTIFNKKKNVLWGINYNRIPLETTLINNYNLKNNTSIQSKQYSVKELTKLYKFLVIKANETRK
LTLQDKNGIVKSNTDYNGVINRAQLGYDNILDILPSVSGSYSKPKYIISSNLMCYTGITGIYFPFTGEAN
VNIAIPDLYIPCTVEHEIAHQRGFASEDEANFIAYLTSIKHPHIDFNYSGYILALNYTASALSKVDYNAY
VDISAGISDSVRRDLKNESEFWQKYEGKINEISNEFNNSYLKANGVTEGTQSYGKMVDLLLTYYELYPYN
>gi|260687387|ref|YP_003218521.1| hypothetical protein CDR20291_2034 [Clostridium difficile R20291]
MRYKKISSLPILVVALLITGTTTTFSLSTTNSEKTNVYLASTVSTVTKKVSDIQSSKGLVYNENIPLFIN
NSKIQYDDTPYHWPSNVISLTNSSEKAIMDYEITCLAYDKNGKPLELYWDAQNVAADGEVGSVGFSPAGV
DYGIVTGISPVSPKSYSHTYRKMQQSPPQDIISMFEKQQGKAWVENWLKEWKQMEKEYAKQNAIAPGKNQ
NDAFLLFDKWKQSTGEHGVKYIISCVKQVTFNDGSIWKNSAYENWLKSFQGKEVSNSVLENYYK
>gi|260687388|ref|YP_003218522.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium difficile R20291]
MSYERRKTREVSVGTVKIGGENPISIQSMTNTDTRDADATIAQIKRLEEAGCDIVRVAVPDIKAAKNIAK
IKSSVNIPIIADIHFDYKLALEAIEQGVDGIRINPGNIGSRERVKMVVEKCKERNLKIRIGVNGGSLEKE
LLKKHGSATAEALVESAMGHIKILEDLDFHNIVISLKSSDIYKTVDAYELISKKVDYPLHIGITESGSVH
KGTIKSSIGVGALLLKGIGDTVRISLTGDPVEEVIVGKQILRSLGLLNDKIKVISCPTCGRCNIDLISVV
NEVEEKIGSMEKNITVAIMGCAVNGPGEAREADIGIAGGKGEGLLFKKGEIVRMIDGNKLVDELLEEIEK
L
>gi|260687389|ref|YP_003218523.1| putative membrane-associated protease [Clostridium difficile R20291]
MTIIAALILFSIIVLIHELGHFIFAKRSGIKVNEFSIGMGPKIYSVKKDTEYSIRALPIGGYVSMEGEDE
EQISPNSFGNKSILQRFSTIVAGPIFNIILAAILLVPVFLYIGSPTTKLGKIMPDTPAQAVGLQVGDKIN
KINGNSVKTWDEVANIINTSSGGELKLSITRDGSNKVVNVTPKNNNGKYEIGIQPQREKDFLASIVNACK
TTVDMTKQMLTFLGQMITGRVPGGIGNAVAGPVGVIGMVSDAARTGIINVVYLAAVISLNLGIVNLLPIP
ALDGWRILMLLLEAVRGGKKLDPNKEGMINVVGFGALMLFMLFITYKDILRLFQ
>gi|260687390|ref|YP_003218524.1| 1-deoxy-d-xylulose 5-phosphate reductoisomerase [Clostridium difficile R20291]
MKKISILGSTGSIGKQTLDVVREHRDKFEIVAISANSNIELLLEQIVEFKPKYVTVFEENKALKLKEMLP
KNIEIEVLAGMEGLKIISSLDEVDVLLTAVVGMIGLVPTLCAIKKGIDIALANKETLVTAGELVMKEAEK
YNVNILPVDSEHSAIFQCLNGENKKNIEKIILTASGGPFRGKKKGELVNITKNEALKHPNWSMGRKISID
SSTLMNKGLEVIEARWLFRVEQENIDVVVHPQSIIHSMVQYADSSIIAQLGCPDMRLPIQYALTYPDRME
SSFERMNFSKFSTLTFEEPDLETFPCLKLAYECLKMGGTYSSVLNSANEVLVSEFLEDKIGFYDIPYYIE
KTLEVHSSISEPTLEEILETDRWSRAYVANLIKK
>gi|260687391|ref|YP_003218525.1| putative regulatory protein [Clostridium difficile R20291]
MISYAPLWKLLIDRKIKKMEFVNISGISISVLGRLGNDKSVSMDTMEKICLALDCKIEDVVEIKKGI
>gi|260687392|ref|YP_003218526.1| hypothetical protein CDR20291_2039 [Clostridium difficile R20291]
MLYLLKINQFERSYDIGIFKNEQSIYKFIEKIPFVKKDNSNFNYTNYYMEFEDIPEYYEVNFNNYLYIIT
RFSFIPDGTEIFFTWEEIHYWDEKVATEKTFINGETLVDSYNFPNNEVKDYIQKRESLYIETKKYYEEKG
LKIERHALGSEDGEYVELTNDSILYLLDIEAVEIREQSKNIEEFLYKYKKRFK
>gi|260687393|ref|YP_003218527.1| putative signaling protein [Clostridium difficile R20291]
MKKKYDFLIYSAIWLVIIIFFIFSLYHSIEHIKIISHTGTIRSETQKVVKQELNNERNDDLIKRLDNILI
KLRTGNGENGFQRCDNKEFQQKLNQMDSMWESMKKEIIKVRNGASGDKLYKLSEEYSVLSNQIVFISEKH
SNAKLYSFATALFIYLIFSTISLLIWEYYNKKRFKRIFYTDNLTKIKNQVAFENRAIEILYNASNKEYVL
LNIDIDNFKYINDTHGYEYGDKVLIIVAAALSKTFNIKETCARIGSDNFVILAKYRDSLLEDIREMLTNA
IISELDMNVTQTISYCIGAYLVEIDNLGYKSINSIMDKANIAHKVSKTRGISSTVWYNENLLKQLQMENS
IYNYMYKAIENEEFHMYLQPKFQISSLNVVSAEALVRWFSPELGFLSPDEFIPLFEKSGFIIELDFYMLK
KACSFVKKTFMKKNQYTYPIAVNFSRVTIYQNSFYQRFLDTVKEYEIPFKYIEIEVTESAFNEISQPVIS
ILEELKKLGFLISMDDFGSGYSSLSLLCSLSINGLKLDKSLLKETFNREKVYSIIQCIIEMSHRIGMSVV
CEGIETKKDLEFLNTVKCDVGQGFYFSKPIEEKEFFNKYVTKK
>gi|260687394|ref|YP_003218528.1| putative phosphatidate cytidylyltransferase [Clostridium difficile R20291]
MLTRIIASLALVPLFLFVVYGGIPLYIAETAIVYIALHEFYKAFKIKDVHPIFIIGYLFSIYLAVKNIFN
LPLEYTYAVIFILFLASIIYMLMGKNNVIDVSITFLGVFYIGVFLDFIIITINGFEKGSIYVWLIFVISF
MTDIFAYFSGYLLGKHKLIPKVSPKKTIEGAIGGIIGSTLCCILFGYLFGIDLLQLAIIGSIGSVIAQLG
DLFASSIKRYVGIKDYGKIIPGHGGILDRFDSVILVAPFVYSAIKFFIR
>gi|260687395|ref|YP_003218529.1| undecaprenyl pyrophosphate synthetase [Clostridium difficile R20291]
MNNNIIYDIDLNNIPTHIAIIMDGNGRWAKARFLPRTAGHKAGVETIRDIVKECSKLGVKHLTLYAFSTE
NWKRPKLEVDTLMNLLSTYLRNEIAELHQNNVKVTAIGDISALPKTCIRELNSAKELTKNNTGVNLNLAL
NYGSRADIKNALIDIVKNCESGKIDINNIDEDIIKNYLSTKSIPDPDLVIRTSGEQRLSNFLLWEVAYSE
FYFTDIHWPDFKKEELQKAIYVYQRRDRRFGGLK
>gi|260687396|ref|YP_003218530.1| hypothetical protein CDR20291_2043 [Clostridium difficile R20291]
MKKYYNLLGLHVDEVKQYFDEQNINYTVKSIEGKKDKEKLVVPRVIKISEIGDSVELIITYFSDSLV
>gi|260687397|ref|YP_003218531.1| ribosome recycling factor [Clostridium difficile R20291]
MKLEIHKQLEEKMNGTIDALKFEFGTIRAGRANAQMLDKIRVDYYGTPTPINQIGAISVPEPRILMISPW
DKSAMHEIEKAIANSDLGLNPSNDGEVIRLSVPALTEERRKELAKKASKAAEEFKVRIRNERRDANEKIK
KMEKGGELTEDELKKAQDEVQKMTDKFIKEIDTLLSKKEKDIMEV
>gi|260687398|ref|YP_003218532.1| uridylate kinase [Clostridium difficile R20291]
MDKPMYKRVLLKLSGEALAGERGFGINNDVVNDIAIAIKKIQEIGVEVAVVVGGGNFWRGRTSEGMDRTT
ADYIGMLATVMNAMALQDALENIDVATRVQTAIDMRQIAEPYIRRRAVRHLEKERVVIFGAGTGNPYFTT
DTTAALRAAEMEAEVILLAKNVDAVYDKDPKVHADAKKFTELSYMEVIQKELKVMDSTATSLCMDNKIPI
KVFELTTENIIRAVKGENIGTTVK
>gi|260687399|ref|YP_003218533.1| elongation factor Ts [Clostridium difficile R20291]
MANITAQMVKELRESTGAGMMDCKKALQEAEGNMEKAVDLLREKGLSKAAKKAGRVAAEGLVAIEMNDDN
TVASMVEVNSETDFVAKNEDFKVFVKDAACMALATDKEDIASLLGETHKEGITLQEVLNNRVAKIGEKLD
FRRFAKVVTNGQVAGYIHGGGKIGVLVEMETEARDAKVLELGKDVAMQVAAMNPKYVSRDEVDAEYIAHE
TEVLTQQALNEGKPANIVEKMVKGRLEKELKEVCLLEQTFVKNPDITVKQLVADVAKAVGSDIKVVKVVR
FEVGEGIQKREENFAEEVAKQLK
>gi|260687400|ref|YP_003218534.1| 30S ribosomal protein S2 [Clostridium difficile R20291]
MSVISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIYIIDLQKTVKKVEEAYKFTKEVAETGKPILFV
GTKKQAQDAIKDEAERCGMYFVNERWLGGMLTNHKTIKTRINKLRELEKMEEEGVFNVLPKKEVIKLRAE
KEKLEKYLGGIKDMPELPGAMFVVDPRKENIAIQEAHRLGIPVVGIVDTNCDPEQLDFAIPGNDDAIRAV
KLITGAMATAVIEGRQGAEEEVAEDQE
>gi|260687401|ref|YP_003218535.1| D-alanyl-D-alanine carboxypeptidase [Clostridium difficile R20291]
MKNLKNALKKIISLAMILVFIIPNYSYADGKSVDKYSKTSILIDQETGRVLYSKEPDMKVPLASLSKMMT
FLLAIEAIENKEVKETDKVKIDKSIASVKGSSYKLKDGEEVPLIELMRGLMIVSGNDAAIAIAKHICKTK
EAFVDRMNKKAKEIGMSNTHFLNPNGLPIYDLSNPKKPAKENISTAKDIAILGKYMFDHYEKQVTAITDM
ETYTNSDRSFEKSNTNALLRIIPEVDGIKTGYTGNAGYCLSFSMVVNKNEKNEKKRRVIGVVLGTNHKNK
RTSASLALLKYGKENFNMKKVIDKDSFIGKKYIKGMKELEVTLKAKDELYTILKDDESIKSEVKIKNIEY
PVKKGDTMGVIKYYTSSGDLLGSVDIVSNNSIDNVSLKTKLKMKFAN
>gi|260687402|ref|YP_003218536.1| hypothetical protein CDR20291_2049 [Clostridium difficile R20291]
MNCKWISKIDERKKCHREADSSGYCIFHKENKSDEEIQLMMDTIHKEEISEFNGFVFENEFNAEEILTYN
YKILDFSESIFKQKANFKKYIFKKNIIFNYTEFRDKVLFNGCIFLENCDFNRTIFSKNYINDRIFEKVKF
KGPDLVVNKVENFPRMDGIIFSMCTKFVLKNVEYGKSEYEHGKINYRIARNQATKIGEYEMIGFYYYKER
IYSSKIMKRSNYPTFSDYLVEKFFDQIARYTTGYGEKPWNILLVIIAIISVFALLYLFVGIESSNSTLVA
LDINNIGDYSLSEIFKMYMDLWYFSMATFSTVGYGDMVATSLIGKALAGIEVFFGVTIGAIWASVIIKRM
IR
>gi|260687403|ref|YP_003218537.1| putative transcriptional regulator [Clostridium difficile R20291]
MEQHSKVGNFGDLLKVLLDEKELSMGELSKKSGIDKSTISRIANNKQRPNINHLEKMAIHLNINLEELLK
ASGYEFRNSNNQIFNADSDFSNFDDILGFANLINDKNFNGNIEKELSKCKLYVQTDEGKKLLFDNFNKKI
DSIEKQGQFTDRLRQMYADFCTDGLTIKKYLLIGSMLLYFVISTDVIPDFVFPIGFMDDLVALNIVTKLL
KNDK
>gi|260687404|ref|YP_003218538.1| hypothetical protein CDR20291_2051 [Clostridium difficile R20291]
MIESILLVTSLCIDAFVTSFGYGVNKVKVPLYSNIIISVVCSAILAISLFAGTIVRDFLPQNITMLICFF
ILFLLGSARLIESFFKSYFKKKSIHSKNYNFNMLDLELNFNVSIEPDVLDTSKSKVLKSAEAFTLALALS
LDGLAIGFGSGLVGVNYIQVILFSLISNIIAVLLGCLLGNMFVKNVNLNLSWLSGLILLVIGFMKIC
>gi|260687405|ref|YP_003218539.1| DNA mismatch repair protein [Clostridium difficile R20291]
MNSNTFERLQLNEVKDLIKIHCVSSLGKNLIDKLTPSGNIGVVRRKLAENKEARKIIENSNHIPLEGLFN
AGSTIDKIEKGMIIEPVELVNIEDFLRGCRKMKAFMLEKEFYSPTLSSYALNITECKSIEDEINYCIKSN
KVDSNASKELKKIRRNIEITEGKIKDRLNKFITSTVNKKYIQEFIISKRNDRYVIPIKSSYKNEVNGTIL
DTSSKGNTVFIEPISVSNLSTELTMLKADETIEEYKILSYLTELIFEKISQIKLNIEILSEYDMVFAKAK
YSQKIKGITPKINNNGYIKIIKGKHPLLTGDAVPLDFEIGKNYRSLIITGPNAGGKTVTLKTVGLLTLMV
QCGFDISAKEGSEFSVFEKVFVDIGDNQSIENALSTFSSHIKNIAEIMSLSNNSTLVLFDEIGSGTEPNE
GAGLAISLLEEFYKMGCITIASTHYGEIKKFATLHPEFENAGMMFDKETLEPLYKLTIGKSEDSNALFIS
KKMGIKNRVLDRAKEYVIDRNYNLDLVKRSKLQSNIEDKNSSEVILSYTDYNVGDKVKLLDEDDFGIVYK
PMDKFNNVEVLFNDNFISVNIKRLQLSIKASELYPEGYDLDVLFTSFKERKLEKDIQRGSKKALKKIQKE
IRENRK
>gi|260687406|ref|YP_003218540.1| hypothetical protein CDR20291_2053 [Clostridium difficile R20291]
MSNIKIIASNKCWIEDIARKQLEDISKLNGILRVVGLPDLHTGKIPVGLAVETKNIIYPHIIGNDIGCGM
TLFKTGVLKKKFKKDKWIKSLSKIKDLSDIEIKNTYKEECPILNLGTIGSGNHFVEIQCISEIYNKEQFE
QLKFSSDDIMMLVHCGSRNYGEDILKKFYDKDGLEVESEKAIDYIKKHDNALMWAERNREAISKKIMQSI
GTSEDVETIFSINHNFIEKREDKFIHRKGAVSSERGAVIIPGSRGSLSYIVMPTENTEISLYSLSHGAGR
KWSRSVCKSRLKSKYSKDTIKQTKFKSQIICNDVNLLFQEAPEAYKNIEQIIESLIEYELIQVVATMKPL
ITYKG
>gi|260687407|ref|YP_003218541.1| putative serine/threonine protein kinase [Clostridium difficile R20291]
MYEEVTWLNFIGNRYEVVNSDDVLEINKIYKARDVFYRRNVLIKVIKHNNYICEDFVSNLIDESTALDEI
NSPYILKIIDVGIHCTEETTLYYVVSEDFNGIGLDELILGNYLHLEAIVNIMIQVLKALEMIHRNHSYHG
SLKSSSIIVDTEYNIKICDFGITKANNGVNTRSYGNRRYLCPHQLCINYTDKESDFFATGLILFESIFKK
LPFGESNSEEKMLQSIDKGLDWNSIKAINGNTELINVIKRLLGRNNKYTRANDIIIDLSKVMYEKAYIEV
EDEKEEEQKQDKVIQVKKEYKSKMRKKLHKKLVVAGLAIVMISMIIISSII
>gi|260687408|ref|YP_003218542.1| hypothetical protein CDR20291_2055 [Clostridium difficile R20291]
MGRRTTRVSRLGKEKKRSVLIVLAALVLIMGGFTYFFNSKFLYNGKIAKNVYIEGVNVSDMTKAEALKAI
TDKYTPEDLNLTYDGKKYTISPKDIDLKYDTEDVVKDAYESTKKGSYFQNLKKYIDIRVNKANMKIKAEY
DEAKLSSKVSSIADSINVKMKNASISVGSGGLSYTDSVVGREFDLAANKESIYNMIKNKEHKTLELKVNL
QKPDITTEQVKTVNSVIGQYSTTYSQAVEGRSYNVGLSARKTSDVLLMPGEEFSYNKLTGPSNKANGYKD
APVIVYGKLEQSAGGGVCQTSSTVYNAALLSGMEITQVTNHSSASTYVPKGRDATVSDGGLNLKFKNPYK
HPVYIKNYAGGGSVSSVIYGNSGDKPNISIEVKQTGQNKYSTYRIFKDSSGKVIKKEHISNSSYKELKK
>gi|260687409|ref|YP_003218543.1| putative endonuclease/exonuclease/phosphatase [Clostridium difficile R20291]
MKIVTYNIHKGMDSNNRLTLTKMGLYLKQLDCDVICLQEVLYPQFLALKAVLNMDGVFATNVKKVNMIYG
ICTFTTSKMLNSNHFFLTSKKEQRGALCITIDAYGRIINVINTHLGLDRQERAKQLDEIIDYRNRLVGIV
ILCGDFNEKNVFLSMFNDMAISLNKSYLPTFEKSNSRIDYIFVNKNTELKGYTVEKIYLSDHYPVIGYI
>gi|260687410|ref|YP_003218544.1| hypothetical protein CDR20291_2057 [Clostridium difficile R20291]
MYNVIETGFVYCSFLVVFVGVIFFMVDKLKWKVFDVINPMLLIYLGSAILGSFGLFAQNEDVGTYQNIIT
VNFLPLMLVFLLIQCDLRKILKMGPKMLLSFFCATFTFMLGFVIAFIIFKNSMGADSWKILGAASGSWIG
GSSNMIAAANALGVAEEGLSYAILMGSIGYTVWMSVCLMSVKFGPKFNKWTKCDTSFIDEVTSKLEKENK
DNTAPTFVELMILLSVGFGVASFAQIVSKILPTSGILNETMWVVLVASTVSILLGMTKISKLKGSTLVGN
VFMYLLLAATGSKANFFGLSEAPVYIMFGLVVVLVHAISFIGLAKLFKLDLFTCEVGSIANIGGVTTAPM
IAGVHNPVLIPVGVLMGLLGNIIGTYCALVVTQILHMLA
>gi|260687411|ref|YP_003218545.1| putative glutamyl-aminopeptidase [Clostridium difficile R20291]
MNLNLTNTINLMKKYLDIPSPAGYTENAVLEIKKDFENLGLDTILTKKGALIATLPGEDDSNQITISAHM
DTLGAIVKEISSDGTLKYHKVGGGCWAAIEGENCTVITRKGKKIRGSVVFKYASTHIYGQTKAATERNEE
TMIIRLDEKVFTKQDVLDLGISVGDFVCLDHRFEATESGFIKSRYIDNKSAVAMVLEICRYFKENNLTPK
HTTNFYISNYEEIGHGVSKCLPEKTKEFVAIDIAPTGPSQTSSEHGVTIVAKDNLSLYDFNLRNKLVDVA
EDNNLDYAVDVFTFYGSDASEAIRWGEDVQIACVGPGTNNSHHYERTHIEAIENTLKLLINYMLKE
>gi|260687412|ref|YP_003218546.1| hypothetical protein CDR20291_2059 [Clostridium difficile R20291]
MKKVAVISAILEEPKECQFKFNEVVSGFKGIIKGRMGIPCEEEGVSIVCIAVVGEMDTINSLTGKLGNIP
HVSVKTSISKKEV
>gi|260687413|ref|YP_003218547.1| putative ATP/GTP-binding protein [Clostridium difficile R20291]
MSLNSTPQSVRVHIGLFGKRNAGKSSIINAITNQSAAIVSDIAGTTTDPVFRPMEILPIGPCVLIDTAGL
DDVGELGELRIGKSLDVLEKTDIALLVVDCQIGISQEDLSLIEKFNDKNIPHILILNKIDTIKNQSEILN
LTKNKVKCPVVSVSSTDKIGIENLKNEIIKVLPKDSTEFKLVSDLIEPNDLVVLVVPIDKAAPKGRLILP
QQQVIRDILDNGAISIVTKEDSLKETLSNLGKKPKLVITDSQVFPQVNKDTPKDIPLTSFSILFARQKGD
LKELINGAYALENLKDGDKILMAEGCTHHRQTDDIGTVKIPNMIRKKTGKNITFEFSSGVSFTEDINKYA
LVVHCGACMMNRAGMLSRIEKAKSFNVPIVNYGILIAYVKGILERSLELFNY
>gi|260687414|ref|YP_003218548.1| radical SAM-superfamily protein [Clostridium difficile R20291]
MTKNKIKYFIDKLYSINSLSFDELLYLIENIDNEEYNFEQNLRNYLYKQASDMRNKHYGNRVYLRGLIEL
TNYCKNNCYYCGIQSSNKNIIRYRLSPDEILECCDIGYKIGYRTFVLQGGEDAYFTDDKICEIVSSIKNK
YEDCAITLSLGEKSYDSYKKYFLCGADRYLLRHETATDSHYKKLHPPNIELRTRKECLKNLKEIGYQVGA
GFMVESPFQNNKDLVRDLLYLKELNPHMVGIGPFIPHHDTIFKDYKHGDLEKTLLMLSITRLLLPKVLLP
ATTALASINPSGRNAGLLAGCNVIMPNLSPQEFRKQYSLYDNKAFTGQEACEYHQSLEENIKSLGLEVDY
SRGDNIEWRRL
>gi|260687415|ref|YP_003218549.1| radical SAM-superfamily protein [Clostridium difficile R20291]
MFINHELINSLLEDAKNSTSDDIEKVLDKADRREKLSYKDIATLLEVEDKKQLDRLFSIAGQIKNEIYGN
RVVLFAPLYVSNYCVNECVYCGFSKCNKFKRKKLTMEEIKEEVKILEKMGHKRLALEAGEDPKNCDINYI
LDCLDAIYSTYNENGNIRRVNVNIAATSVDEYKLLKEKGIGTYILFQETYHKPTFIKMHGQSIKNDYYYH
LTAFDRAMEAGVDDVGAGVLFGLSDPKFEVLGLMMHNEHLEEKFGVGFHTISFPRLKKAEGMSLEDFPHL
VSDDMFKKIVAITRLAVPFTGIIMSTRETAEMRNELLKYGVSQISAGSLTGVGGYKAYEDGDNTEQFEVG
DHRSPVEVLKELITDGYIPSYCTACYRKGRTGDRFMSLAKSRQIHNVCTPNALTTLNEFLIDYGDEELKI
MGKKLIAEEIGKIEREDIRNIVSNNMTALERGERDLYL
>gi|260687416|ref|YP_003218550.1| hypothetical protein CDR20291_2063 [Clostridium difficile R20291]
MKDNNNTNKTIQFGEKKASLENNIQKNKNIKLDNTHKVIPYPKNRKKDDKKKGNKKKNTNTSKVNKNNYG
HSFFNNKYKYKRKPYVIALYTVILILLAILIITKLTDSTNKGNYSRNTVSDTHKNDIRNIVFNESNNFLI
CG
>gi|260687417|ref|YP_003218551.1| 4-aminobutyrate aminotransferase [Clostridium difficile R20291]
MSEITSQMISTEEKKYVAKTQKIPYYPVAFKSGDGAMLYDYEGNEYVDFLASAGSANVGHGNKEISQAVK
EQMDDITQYTLAYFHSDPPVKLAEKLVEIAPGDNDKKVLYSATGSACIDAAIKLARGYTGRTKIISMCES
YHGSTYGAISISALSTNMRRKMGPLLPEVYHFHYPDKNRTAKECLDEIEYAFAHYLPAEEVAAIFIEPIA
GDAGIIVPPVEWVQGLSKICKENGILLVSDEIQQGMGRTGKWFGIENFGVEADLIVLGKSVGGGLPLGAV
VGRTEIMQSLDAPAHLFTLAGNTTVCVAALKSIEIIEKENLLQKSIEMGDYIKAGFEKLKEKYDIIGEIR
GIGLSIGVDIVKGKGSNEKHPDATAKICYRCIQTGLIMIFLGQSTLRVQPPLVITKEQVDKAMSIIDSAI
DDYLNGRIGDEVYEVTQGW
>gi|260687418|ref|YP_003218552.1| hypothetical protein CDR20291_2065 [Clostridium difficile R20291]
MEIIKYILYFFIYSFLGWTVESIGCSIASKRIINRGFLNGPICPVYGFGAVIVISLLGRFNNVVIVFLLG
MILTTILEYFTGFILETLFHAKWWDYSDRKFNIKGRVCLKNAIYFGVMSVLIIRFIHPFIKYFVSIIPYR
ILISMAIITTLWTILDLIVTIITLKKLDIKLNLLDDIITDLNDINVKLDKFDRGEIQALFKTINNDGLEV
REKINKINSKLDRIESNIILQKRVIKAFPHIKHKKQQEQLEHFKKIINEKR
>gi|260687419|ref|YP_003218553.1| hypothetical protein CDR20291_2066 [Clostridium difficile R20291]
MIESKKSEKLLLSIIYIIFLVYILMIIRIILFRDVPIYAIFKGTFRNVNLIPFYTIYQFIVDSNLDFMKA
TVNIIENIGIFIPMGIFLPIVCKNLNKKTIIIVIILVSLAFELTQYIFALGSSDIDDVILNSLGGIIGIN
IYINMNKLFPNDIKRFKAIIATSLVLGVLGLGVISKNYHNLLTFKFRPDRKISKILIEENREIIKDINKD
TVDIVGTFESFKKGIITIKAGSNNKVKRPENLIDSDGNIRIYLNENTKLVSYIITKESKMDIVKYEEFDV
KNLDLLRRYDTINVWIDKENQPKDKHGIMASKLLIGLYE
>gi|260687420|ref|YP_003218554.1| hypothetical protein CDR20291_2067 [Clostridium difficile R20291]
MGVLKGMFYVFLFLDLVSIFCFFFNKGKIASNKIVFNAIGVLTFVLCFMLFSYYPNNNLIGKFIASLFFI
FGVAGVMLKEKNFLYARLLLTVVIVFSTLRLFVIQ
>gi|260687421|ref|YP_003218555.1| putative acetyltransferase [Clostridium difficile R20291]
MEQQKDYIELYENEELIEIREARMDDLDTIAKFNYNLAKETEGKELDMDVLTKGVKALLLDERKGKYHVY
TVFDKVVAQIMYTYEWSDWRNGNFLWIQSVYVDKEYRRKGIFNYLFNYIKNICDKDENIVGMRLYVEKEN
INAKATYESLNMYECDYNMYEYEVIHS
>gi|260687422|ref|YP_003218556.1| putative RNA-binding protein [Clostridium difficile R20291]
MEKLYYTNQYIRDFTAEIIEIKEVENKYHVLLDKTAFFPGGGGQFGDLGKIENDDVINVYEDGKNIYHVL
DKKPIKIHKVKCSIDWDRREDGMHQHFGQHVLSGCFFKTFNANTTGFHLGNEYSTVDIEGNLEENKIREI
ELFANEIIRQNIQVETLLPTKKELKKIWLRRDLPNTDEEIRVIKIGDLDTNACCGVHPKSTGELRMIKIK
KWEKHKSSTRIEFLAGKRAVDEVLKRDIYLTKICRYLSCSEEDAINGIVNLNSKVEEALIKKRRLEEVVS
TYQVKEMIEKANKVGNISVIKKIYDDEDLKYVNKIANKIAEYENSIALLAVKFNDKINLVFACSKNLKDI
NMGVLLKDAISLIDGKGGGSKVLAQGGGKNNGNLEATLDYAFMKIEKTL
>gi|260687423|ref|YP_003218557.1| L-lactate dehydrogenase [Clostridium difficile R20291]
MAIKPRKISIVGSGHVGSHCGFSLITQGVCDELFMIDIDESKSKAQALDLADAVSYLPHKVHIEKGTFSD
CKDSDIVVISVADSSEGPLRRQNTTRLDLLRPTIGMIKSIVKPIVDSGFDGIFVVISNPVDVVTNYIWEK
SGFPKNKVIGTGTALDSTKLRRILSEETGIAQQSIQAYSMGEHGDSQMVPWSHVSIGGKPILDMIKDNPN
TYSNLDLPSIVEKNKKTGISIINGKDCTEFGIGTALVEIVKAILHNEKKVLPVSTLLEGQYNERNVFAGV
PCVIGKDGIEEIIEINMTEYEQNEFNKSCSVLRECIALSKTL
>gi|260687424|ref|YP_003218558.1| hypothetical protein CDR20291_2071 [Clostridium difficile R20291]
MNLKDFNGKRLKSARIFRAKTIEQLSKETKINKKDLKAFEENKYVPNIENTLKLSNILNFPKEYFYKNEN
INIVVEDSHFNPQSKLPRVEEISYREKIIIIHKIYSFMENYIKFPKENLPNRKVMSDINISDIESLAYKT
REFWDLNSTPIVNMVSLLESKGIIISGMNVDRKGATIFTQKQRISKESKYLISLGNDKKSASIRNYTLAC
ELGYIISSELRIPSKQFSEDEYACAFLLPKESFLKDLTHPEDLDYYVELKKKWIVPISAMIFRAYNLEKI
NYKKYNYLMNEMDKKGWLIEEPLDKMKGSSPTYLKRAVELLIENKIMSVNSIVSSLEEFGINLYPEDLEL
LMGLKKGLLSQEVNKKSKVIKFDGKK
>gi|260687425|ref|YP_003218559.1| putative peptide methionine sulfoxide reductase [Clostridium difficile R20291]
MKMIKLATFAGGCFWCMVKPFDKYDGVIKVVSGYTGGHVENPTYQEVCSGTTGHLEAIQITYDDDIISYD
ELLNIFWKQINPTDDGGQFGDRGTQYKTAIFYHDEEQKNIALESREHLENSKIFDSKIVTDIIPATKFYE
AEENHQDYYKKRPLNYNMYYKGSGRYNFVKSHWDGNNINREELKKTLTPIQFEVTQNDMTEVPFENEYYD
NNKEGIYVDIVSGEVLFSSKDKFDSGCGWPSFSKPVIDKSIIERSDFSQGMYRIEVRSAKGNSHLGHVFD
DGPKELGGLRYCINSASLKFIPRENMEVLGYGEYLKLFE
>gi|260687426|ref|YP_003218560.1| patatin-like phospholipase [Clostridium difficile R20291]
MWGYMYMKSSNFNILAFDGGGLKGALSISILERIVKEYPNLLNNINMFGGTSTGSLIALGLAYGVSPKEI
KELYSIENSKYIFNKSYAEILRPKYENKNLKEVLLSIFPEELELKDLNKLVMIPSFYIGNEENAWKPVFY
NNMPNSFTKTSKVVDVAMASSAAPVFFPTYNRHVDGGIIATDPSLACIIHAIDSGFKLKNTRLFSIGTGY
VYNSIKADTTEWGAIDWIINKEPDLPIISITLEGNSQMSQLFSQKLLGDNYYRLNPKMEKDVAMDDCDAL
EYLMSLGENCDIKDAFGWIKKKSFYRN
>gi|260687427|ref|YP_003218561.1| hydroxylamine reductase [Clostridium difficile R20291]
MEKMFCFQCEQTAGGKGCTINGVCGKKGGTANLQDELTGVLIGLSRATIGNKNRPTSETDKIMIEGLFTT
ITNVSFDDEAIKRQIEKTEVEKSKLVPRCSDCSTTCNRNDNYDMKDLWNDNEDIRSLKSLILFGLRGMAA
YAYHAMVLGYTDKDVNEFFYEGLIAVGGDLSIDELLGLVMKTGEINLKCMELLDRANTETYGTPEPTQVS
MKIEKGPFIVVTGHDLYDLHKLLEQTKDKGINIYTHGELLPAHAYPKLKEYKHLKGNFGTAWQNQQKEFD
NIPAPILFTTNCLMPVKDSYRDRVFTTEVVAYPGMVHIDEDKDFSSVIEKALELGGYREDVHMTGINGGD
TLTTGFARGTVSSVQDKVVDAVKSGAIRHFLLVGGCDGAKLGRNYYTEFVKQAPKDTVILTLACGKYRFN
DLDLGDIGGLPRLMDMGQCNDAYSAIKVAVSLANAFECGVNDLPLSMVLSWYEQKAVCILLTLLHLGIKN
IYIGPSLPAFLSKNVLDILVDKFALTPISTPEEDMKKILG
>gi|260687428|ref|YP_003218562.1| iron-sulfur binding protein [Clostridium difficile R20291]
MMRKIIKIDEGKCNGCGLCVEACHEEAIGMVNGKAKLLRDDYCDGLGDCLPTCPTNAISFEYREAAEYDE
AAVKANMEAKKAQKKTLACGCPGSQSKSINREVSNSTSISNDIVEIKGSQLNQWPVQIKLVPTNASYLKN
ASLLIAADCTAYAYGNFHNKFMKNKVTLIGCPKLDEVDYAEKLTEILKENDIKNIVVTRMEVPCCGGIVN
AVKTALQNSGKMIPWQIVTISVDGKIVDGEI
>gi|260687429|ref|YP_003218563.1| putative cNMP-binding regulatory protein [Clostridium difficile R20291]
MKTNYRLHMQQGSDYLKKFLEKHIDLLKKIPLFEGIKSDELEEMLECLGVVDKTYPKDSIIFSVGSEVTS
IGIMLKGSAHIIKEDIEGNRNIVAELLPGDLFGEVFACTRLHKSNVTVTTTSSCEVLFIKFKSVTGICSS
ACVFHNRLVENMLQLIAEKNILLHNKIELLSRKTTREKLLMYFSKQIEQTGSHQFTIPFSRNEMADFLCV
DRSSMSRELGKMRDEGLLSFNKNKFEIFYFQK
>gi|260687430|ref|YP_003218564.1| putative Sodium:dicarboxylate symporter [Clostridium difficile R20291]
MRDFLKNYKSSIILLACTIIGVIVGLVLGPKASILKPFGDLFINALLMIVVPLVFLSVSSGVASIKNMER
FGKIMKSTAIVFMGTTLVIAFLGITSALLFNPSKGLDVSSVKSLMVAQDAETLESKGTLLDQVVSSITVK
NFGDLFSSSNLLQLVIFAVLVGTAIAMMGDRGNTIRKFLSEGTEAILKVVSIVMLYAPIGLGCYTATIIG
ELGSKIIQGYVRVFVIYSLTAAMYFLLFYSLYAFLSAGKQGFRQFWRNAIKPIATALATSSSSACIPSNL
EASKNIGVPDDISETVIPLGINIHKDGSVLAVIIKVAFLSGILGSGMANPATIGQLFITVFVVGVFMAPV
AGG
>gi|260687431|ref|YP_003218565.1| putative amino-acid ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MIKVENLHKSFKGTEVLKGINLEINQSEVVAILGPSGTGKSTLLRCLNYLVEPTKGKIMIGDVKVDVEKA
TKKDIANLRKHTSMVFQNYNLFKNKTALENVMEALIVVHKKSNKEAREISLKLIDKVGMLDRKDFYPSKL
SGGQQQRIGIARAMAVNPNVILFDEPTSALDPELVGEVLSVIKSLAKEGITMLIVTHEINFAKEVADKII
FMDNGVIAEEGTPDEIFNNPKNERTAKFLNIVRKEEVFS
>gi|260687432|ref|YP_003218566.1| putative peptidase [Clostridium difficile R20291]
MEVLQMIETKIKSIALKNREKIIKIRRQIHSNPELAFKEFKTSKLIKEELNKLKIEYIDVAGTGVLATIK
GKNNGGKTILLRADMDALPIKEENDLEFKSINDNMHACGHDAHVSWLLGTAMILNDIKEELNGNVKLLFQ
PGEEKGGSDIVIKENVLEGVDALATGHCWPTIESGKIGIARNCAMAATNTFEITIIGKGGHGAEPHNCID
PIAVGNAVYSSIQQIVSRKIDPVVPVVVSVCSFNSGVSKNIIPDVCTLQGTIRAISKEQVIEVSKILENI
VRNVCRAYGADCKFEKSTGGDAVINDKNMIELGRESACKILGVENVEIIDFPAMTGEDFAIYMKEKPGLF
MYIGVGNKEKNINYRLHSNKFNIDEKCLSIASSLFSQLAVDYLCQL
>gi|260687433|ref|YP_003218567.1| putative amino-acid ABC transporter, substrate-binding protein [Clostridium difficile R20291]
MVKRNIIKCLVAVLSLTFVVAGCSKKEEVKDEKVITVASSNSADPYSYVDNGEHKGFEVDMWKEIGKRSG
YKIKMEPTGFSSIFGMLDSGKVDVAANFFGMSKERLEKYDASIPYGSDSVCIAVKDGNNEINKLEDLKGK
VVAVSEGSQGQQVAASVNKDNLFEEKVYGDGTNGLQDLDLGRVSAWIDAELTVVGDAKKANMKVRVLDEK
LSVTNIAYFFKKNDEKSKTIKEDVNKAIEEMLSDGTVKKISEKWFGMDVSADIQK
>gi|260687434|ref|YP_003218568.1| putative amino-acid ABC transporter, permease protein [Clostridium difficile R20291]
MIFNMKYFLELFPIIMKSFNVTVILAISSLVFSLIIGTIVALSSYYKVKVLNQICKVYVSIFRGTPLMPQ
LFFLYFGLAYMNDFVKNMDPVFATSIVLSLNMGAYMSETIRASILSIDKGQIEAAYVMGLTNLQTMKRIV
IPQAVRVALPSLFNNFIDLIKGSSVAFVVGVNDIMGAAKSQGALSFKFFEVYGAVMVIYWCIITPLGWGQ
KKLEKKISNY
>gi|260687435|ref|YP_003218569.1| putative amino-acid ABC transporter, permease protein [Clostridium difficile R20291]
MSNFNFEFCLSIFPFLIKALGITILISIVAFFLSILLGVILAFFTQTKSKVLQYITRVYVSFFRGTPLLI
QIFFFYFGFPMIFSFMKDCSPYLAIVICLGVNSSAYMTEIIRASIESVDKGQQEACYAFGLSKYQSMVKI
ILPQAATSAVPPIVSCTLDIIKGSSLGLTIGIQDLMGVAQVEAASSFKYFEIYMITILIYWAVSIILSNI
QSKVEKRIGKAY
>gi|260687436|ref|YP_003218570.1| putative amino-acid ABC transporter, substrate-binding protein [Clostridium difficile R20291]
MKKLKLIIMLALVLALLITGCSSGNNKNKEEQKTIRVATSGTYYPFAFKDKDKLKGFEVDFWDEFAKRTN
CKVEWVLTDFSGLFGLLEADKADVVSAQLTATPEREKKYAFSDAYNYSGTNIIVREDDTSIKSIDDLVGK
KVGVGTGAVANEILKEKYPNDEIKIVNYSSATLKGNYQDLEMGRLDAVVAQDVEALIAIKEQKLNLKMVE
PPIQFGACSFAIQKNEKGEKWTKEINEVIEEMHKDGTLTKISEAWLGKDITKEPINE
>gi|260687437|ref|YP_003218571.1| putative iron-sulfur subunit of hydrogenase [Clostridium difficile R20291]
MKSLFKFNKELCTACGACLLACIDQNDNNIDNGELFRHVFTIEEGENIEYFSLACIHCNEPKCLGACPKN
CFKKEEGFVVLDNQNCIGCKLCEKACEYGALIYGNDGKANKCNGCIERYKCGMDSPCVMVCPTGALKFNK
>gi|260687438|ref|YP_003218572.1| putative formate dehydrogenase [Clostridium difficile R20291]
MYNKYNNLYLLLGKENVNMDSYRQLKAKIPCKETGIEIKRTLCDICSPGVHCGIDAYVKDGKVIKIEGTK
EHPMNKGLLCTKGLCNREYIYREDRIKTPLKRIGKRGEGKFKPISWDEAYREIAEKLNRVKSEYGAKHVA
FFTGYGKWYRPFLQRFASSFGSPNYGTESSSCSTSAQMAGNVATGRNFTMQDMENAKTYLGWGFNPYYSK
FLNSVNLIKLKEKGLKFIIVDPRITPTTQKLADLHLRIKPGTDGALALGMANLFIQKDLIDREYIEKHVH
GFNEYKEYVKLFDLDTVSRITGVSKDNIVKAVEMLSQGPFCINESAAPIVHHQNGFQNYRAMMSLSAITG
NYDRIGGNIPKQDYFAGKIGGFQTLEKEFVKEVLPKNINERIGGERFPLWNEMVTQFQAMDLPRQIEEKT
PYEIRALFCHGINARMFPNSGRLFKALHSVDFFVNIDLFMTDTSKYADILLPACTSFEREECKSYPGGYI
TYTKKVIDKLYDSKSDVEILSDLANVMNIDDDLLKAGYEASIRHMFKKTCVDVDKLKESDLPLKCKDFKP
YIVGSYTREGYDTSTSRFELKSTIIEKYKDFGLDALPTYRGFNDNIDNEYTHLLTSGARISNALHSRLHD
IKLSRILKNEASCDISSLDAKELGVISGDYIKITTKIGSLDVKVNVTDRVLYKNIHMYHGYRESDINSII
DDNFDPYSGFPAYRSCKCKIEKMNR
>gi|260687439|ref|YP_003218573.1| putative helicase [Clostridium difficile R20291]
MKIDMIYKLIRRNTEPSRWSRGVKYYTNQLVDYIDIDIDDLQNNLLTFRGGVNSEDNYSFYFNSITIDIK
HFKIIENDCSCADCQSKGKSIFICKHIVAIVIKSLKQIKNKRDVPPILIDILGADKDKLSNTNSKTSLDL
SKQLLSLLDNTKRERVNLDVLINVDSNKAIAEFKIGIDKMYILKNITEFAYSKLNGYELDFGKKFTYNPN
IHYFADEDEKLVDIIEEYGTNLSYNFSSSHSKKFMEINASSLKQFLNAIKYKDFTLIFSKEEYHPKILND
TLPVRFDFKNIEDKIVLYSKDSLPVPLTKKNDVLLYDGNIYLLSHKKAHDYSKIYQILSKTKELKFDKED
SKDVLGLLVPRLKSISQEVHLDDNIKNNITKDFKSEFYFDMIDGNICCDVKYIYDDEDKKFVLPNIQKET
TIENKLTSSQFTKENNHYVFKGTDYDLFTFLDLQLESLKEFGDIYYSEKFKLKKIYNASSIQASINQTNQ
NYLEFNFNISDINPKEYKDILKAFQEKRTFYKLKDGNFIDLSERETKDFFELVENLDIMDKSKNNKIYKN
KALYINDVIRSKNLKFIDGKKELDSICEKFRNFDSINLEIPANLNANLRDYQINGLNWFKVLDYYKFGGI
LADEMGLGKTIQTIAFLLSLSNKKSLIVTPTSLIYNWKNEFEKFAPDIKVLLIHGNKRDREKCFMELENF
DVILTTYGTLRNDLEKYSEIKFDYCILDEAQNIKNPVALVTESVKSINAENKFALTGTPMENNLLELWSI
FDFIMPGYLYSKAKFQELFINKEDNVKNLKKLIKPFILRRSKKQVMKELPDKIEKNFFVELNKEQKKIYS
VYSKDIQDKMKDKNLKKDKIVIFSYLTKLRQLCLDPSIVVKDYNKKSSKIETCLEILRDSINENHKILLF
SQFTSVLKNISKELDKYKIKYHYIDGKTNAKERLELVDEFNNSMDKKVFLISLKAGGTGLNLTSADMVIH
FDPWWNPSVENQASDRAHRFGQKNSVQVIKLIAKGTIEEKIIKLQESKKELINQFINGELSNEGVLKSLS
DEEIIDLFN
>gi|260687440|ref|YP_003218574.1| putative aromatic compounds hydrolase [Clostridium difficile R20291]
MAYFNYNDKQCYYNEIGDGTPLLFLHGNTASSKMFNDIIDFYKDEYKVILIDFVGHGKSQMVDKFSADLW
FDEAMQVICFLEAMNYKKVNIIGSSGGALVALNVALERPDLVNKVIADSFEGEVPLESFVQNVKIEREAS
KQDDGAKAFYIYNQGENWEKVVDNDTEAIFEHYKTIGKFFHKPLETMQPEVLLTGSREDEFVSLISSDFF
ENTFSLLLEKIKNGKMYLFDKGGHPAILSNGLDFSNVAKKFLEE
>gi|260687441|ref|YP_003218575.1| ATP-dependent RNA helicase [Clostridium difficile R20291]
MKYTFEKFKLNEKILKSLKSLGYNIPSRVQREVIPKLLKGQNLVVRSKTGSGKTVSFAIPLCENINVDCN
NIQALIVVPTRELALQVKDEISDIGRLKKVRCSAIFGKQSIKDQIAELKQRVHIVVATPGRILDHINKGS
IKLENVKYLVIDEADKMFNKGFVEQMEKILLNLPKEKIVSLFSATIDEEIKYICEKYMLDYSVINIEENE
SDTNQKTRQIDDKIIKANGREKYILLKELIYSENPKSVIIFCNTKEKVSKLYNKMSKEGFLIRELHADLS
QERRIFVIKDFKNQKFNILVSSDVASRGIHIDDISLVINYDVPQDKENYIHRIGRTGRKGNSGKAITIVT
EKDEKYIENIETYIGYKVNELKDIEKSRITHGKILFEEYSKGILKKVSKRKKVDKNSYKSKDIKLNIESE
VVKLYLNAGKKKKIRVLDIVGAFSNIKGITNDDIGVIEVQDLCSYVDILNYKGDLILKKYKEIPIKKKMV
KVKRDIR
>gi|260687442|ref|YP_003218576.1| N-acetylmuramoyl-L-alanine amidase (cell wall hydrolase) () [Clostridium difficile R20291]
MKICITVGHSILKGGKSTGVNGIVDEYNYNKKLAPMLAEMLISQGNTVDVIICPERHFMSEREEFFYRVP
KVNSGKYDLLVELHLNKADGTQCGTEVLYYGTEGLEYAKRVSNRLGELFENRGAKKRENLYILRNTNPVA
IQIESFFCDNVNDCNKANESGYDYIARLITEGILNKDINM
>gi|260687443|ref|YP_003218577.1| hypothetical protein CDR20291_2090 [Clostridium difficile R20291]
MRITKTTFNDVFSNDANGSIIKVEKYVDKKCASVFEILTYTIIVTNTSRYKTGNIFFKDYISKYIEFINN
TVKVNGIIKRGLDPQQGFYIGRIDASCKKIISFKSVVLPNSAHRIIKNSANIYYYYKCNLDKFPTRISIE
SNRVYTNVNKIVFKQLNISNTLKAPKNLRDILKVNVNSKIFDVKPMKNLINKGSNLKLCNSIVFGCIEVE
IDYSCKNRSNFKTVNKFNDIKKDKYYKNDIQNNNENINDCKKQISFGDNKVKKITKTFGFSCFICSPVGI
IYEDMKNINIKIEHTSINELNPEELFVNTSLLLYY
>gi|260687444|ref|YP_003218578.1| putative phage-related hypothetical protein [Clostridium difficile R20291]
MYENNKVIYNFERCEKLENALYLSQFNTYKNFKLTSKKTVINSLDTSTYNMNIHSISLVDTMECISSEDE
QMTGKKLILVGDIDTDVTLDYAGNKRNRNSSKKNTFKLKIPFSTFIQMPRKIENKDKINLKYLIQDITSS
ILDDNLFISVTAIISYENSSKIE
>gi|260687445|ref|YP_003218579.1| putative lipoprotein [Clostridium difficile R20291]
MKKIFSIFISCMVVVTTITGCSSGEVIKNTSPINSVKNLDFSFEVKPEIFEVSVESGGSKEKISEPSKER
KVSNFKKNKTEASWTYPDENIDINIKKEDSYLDVNIKSNLEKETSFNWPKVEGESYILPLYEGKFIPSND
KYWKEYLNESTYNVIESFSMQFFAVNKAKYSVIYIIENEFNNVIEFSSKDKINFTFKHEYPSINKNKEYG
FKIYLTNKNITDVAKTYKNYIVDKGEFKTLKEKSKENKNIEKLYGAPHIYFGDKSIITINDIEWNKLKEN
LSDDLTNWMKELLSMKSGNSEFIKVINQIKTQDYIDKYQKNQIVQAFNEVMQMNTFYNEKVFESKDREIK
KVLDKGISKLSRVELIEFNKKLLKSKLEESVNDVATWAKYNTTDVINDINKSGIKNAWIGFDDMEEGYIS
LEMVKRANELGYLVGPYDSYHSIHKPGEEKWSTASFKDKSLYENATIENKKGEKETGFQGEGRKLNPTLS
LPSVKERVQSILDEGYEFNSWFIDCDATGEIYDDYSQNHITTQTQDLNARLERMSYIRDHANMVIGSEGG
NDFSSSTIAFAHGIETPAFAWVDKDMSKNKGSEYYVGKYYSPTGGVPEIFSKQIPVKERYKKIFIDPIYS
LPLFRLVYNDSVISSHQWLWGTLKIKDEVGSRMMKEVLYNTPPMYYIDRTEWEKHKDEIISNNKVWSAFN
KKAIKKEMTDFKFISEDRLVQMTEYGEDLKVLVNFSQKDIKYNDEVIKANSLVIYDADSKVIYKPE
>gi|260687446|ref|YP_003218580.1| putative phage-related cell wall hydrolase [Clostridium difficile R20291]
MKNKKFIVIILIISILIGVLVKEYSSREIKKDDINVSKYIKYADLASKNNAQVNWKYVASIVAVLNKNNL
KNVKDSQIQEVSDLFVKNFSKNNKINKLSDILDELEFSNRQKRLVDNYIDNLKDYGIKPERLKSDTKYMK
FIAEIKTEAIQNYKDYKILPSITIAQAIIESSWGKSTLAKQYNNLFGIKADAYWKGKSVTLETKEHLDTI
IDDKFRIYDDKNESIKDHAKFLATNKRYKNNGVFDAKTYIYQAKALEKAGYSTAKDENGNSIYAARLIEL
IQQYNLQLIDSEIQSEV
>gi|260687447|ref|YP_003218581.1| maltose phosphorylase [Clostridium difficile R20291]
MKCLFSNVDEWKIIQDKIEIKENRLAESIMSIGNGYMGMRGNYEENYSGDTHKGSYIAGVWFPDKTRVGW
WKNGYPEYFGKIPNSVNYIGVRIFIDDVELDLAKCKVEDFYRELDMKNGILNRRFIVNINDKKFEVRVTR
FLSISVKELAVIKYSIKSLNSNTKIKFVPYLDSNIKNEDSNYEEKFWNGISSSSLEYKGSILSRTKENAF
NTPVFTVGSMMYIKTNGDVEAVSHESDYNYCENSITMDVLKNKVASIEKYVSITSTRDYKESELLRKCED
ILNIELSKSYDDILNEHTKLWNKRWESADVKINGDKSSQQGIRYNLFQLFSTYYGEDSRLNIGPKGFTGE
KYGGATYWDTEAFCVPVYLGVADKEVTRNLLEYRYNQLEQAKDNAKKLGLKGALYPMVTFDGVECHNEWE
ITFEEIHRNGSIVYAIYNYTNYTGDYKYIKEKGIDVIIEIARFWASRVHLSTKKDLYMIHGVTGPNEYEN
NINNNWYTNCIAKWCLDYAVENILRLEKECNECIDRNNVTREEVEFWKIISNKMYLPYDEELQIIIQNDN
FLDKEFVEVKDLPKENFPLNQNWSWDKILRSCFIKQADVLQGIYYFGNRFTKEEKKRNFDFYEKYTVHES
SLSSSIYSIIASEIDNLEKAYELYSRTARLDLDNYNNDTNDGLHITSMSGSWLSIVHGFAGMRTWNETLS
FDPKLPKEWKNYSFNINYRDNIINVDVCSDLIKIENLKGKPIKIIVYGKKYILEKYIKIDK
>gi|260687448|ref|YP_003218582.1| beta-phosphoglucomutase [Clostridium difficile R20291]
MIEAFIFDLDGVITDTAYYHYMAWRKLAHKVGIDIDTKFNESLKGISRMESLDRILEFGNKKYSFSEEEK
VRMAEEKNNYYVSLIDEITSNDILPGIESLLIDVKSNNIKIGLSSASKNAINVLNHLGISDKFDFIADAG
KCKNNKPHPEIFLMSAKGLNVNPQNCIGIEDASAGIDAINSANMFSVGVGNYENLKKANLVVDSTNQLKF
EYIQEKYNEYIVRRII
>gi|260687449|ref|YP_003218583.1| cyclomaltodextrinase (maltogenic alpha-amylase) [Clostridium difficile R20291]
MFNKNKENITLSNQIKGTIQNSLTKEAILHIPMSNYAYGYDRETLHIRLRTKKNEAKRVILRIGDQYVWD
KGGAGGGNLNASGVGWSGGTNIVMSKEVETELFDYWIAKCKPLNKRSRYGFIIEGQEEKLLFTEKRIIEL
GNENDEKELCEIGNFFGYPYLNYIDIPKVPNWVKDTVWYQIFPDRFANGDPSINPEGVDKWGAIPTRDNF
TGGDLQGVIEHLDYLSDLGINGIYFCPITIGKTNHRYDTVDYMEVDPTLGDKETLKKLIEEAHKRNIKIM
LDAVFNHIGYYSKQWQDVVQNKENSRYKNWFYIKDMSKIDTPIEQIDEKNIPYETFGCEKYMPKLNTENS
EVIKYLLDVGKYWIQEFDIDAWRLDVSNEVDHVFWRKFREEVKKVKPDIYILGEIWHGSLPWLMGDQFDS
VMNYLMSEAMKKFFCTDEINAEEFKYMINDVMVSYPIQVSEVIFNLLGSHDTTRILTYANGNIDRFKLAY
MFMFVQTGCPCIYYGDEIGMEGELSSISEGQRKCMEWNEEKWNKDIFDFMKKIIRLRKENKELRSISNEW
VLADKENGTIILKKESISIIINNSSKNIILTLPDYLANKKVKDLYEEEIVDLKEELMLEKYKFIILK
>gi|260687450|ref|YP_003218584.1| putative phosphoesterase [Clostridium difficile R20291]
MNLIDNHIHTNFSSDGKDSMEDTIKKAISIGVRYLTFTDHLEHDEDRGFCINYNDYVPVFNKFKEKYKKD
IELLLGVEVGYRKHLKNEIEEIINSNPFDFVLCSTHTIDNVPVPSKAYFKGLSKEDAYYKYFNSILETNR
EFGDYNIYGHLDYISRYGIYSDNRVIYNDFKDVIDEVLKSIINNGSGIELNTSGYRYGLNAIHPNEDILK
RYKELGGFIVTVGSDSHRVEDICKDFDVAYDMLKYLDFKYVSLFKERETYFVNIKKVKSNNIA
>gi|260687451|ref|YP_003218585.1| hypothetical protein CDR20291_2098 [Clostridium difficile R20291]
MKKSNIFSIIFPTIIMVLMFLTFATDIFNIPDIQSKSIFVVGMVLIFPISFLIQGIICVLNKTNWILSLI
VSLVTYIVLMYIFLNDSAYIYVLLYTAFYMIGHITAKLYYKIKTFKN
>gi|260687452|ref|YP_003218586.1| cell surface protein [Clostridium difficile R20291]
MRTIRRVLALGLTLAIFLINVPNVDALTSDTIKGNNIYETAGLIADKKSYDTAIMVNMDNSIADGLSASG
LAGAVDAPILLAQKNKIPNETKQRLKNVKKIYIIGKELSISKSVETELKNTGAQVTRLGGDDRIKTSYSV
AKEVNGIKKVDEVILTNAYKGEADTISAAPVSVRDIAPIVLTDGKSVPFSTSNVKTYAVGGSISMSTSLV
NKTNAKRLGGSDRYDTNKKVIKEFYPDASEFYLSDGYDLVNALTGSTIAKENPIVLVSESSDKSILAGAD
KITRLGSISDSVYNKCVSAAQNNGDSSTKGESPMKNETSILGQPTASLEACLKWAKSKKANDLFIELIPI
LYDTAVQEGVNPVLAVAQSAKETGFCNFGGVLDASFKNPCGLKTSVGGSDTDKNAHSRFDTWEEGILAQI
QHLCLYAGQDGYPLSNPVDPRHEKSLFGKAKTVESLSNNWAGGQYGQDLVRMMGEIEATK
>gi|260687453|ref|YP_003218587.1| putative regulator of a specific sugar metabolism [Clostridium difficile R20291]
MMSNKQGSNIKDVKIKNKLIILKLLSTNTPMSRVDLAKSTGLTKMTLSNLVTELINENMIREIESSTLNA
HSSGRKPILLDISNISPCICGILIRRNICKVIISDLKGNIVKQLSETYPKCLSNDVLKDIIKRMFTKIMK
INKRDIIGIGISSIGPVDDINGTILNPPDFGNVSNLNIVDFIKEMSDFPIFLINDANSGALAEKMYGLGK
NISNYIYLHIMNGIGAGLVLENKLHTGNLGQSGEIGHTSINFSGPLCSCGNNGCLDYYTSVSNLIKRIES
LSHIYPNSPLINCKDFSLVKLIDEANNKDSLAMFLLDEFCTYVSYALVNTLTLIDCSSIIIGYDFNIPGT
FIENTLLKKLTASASFSKYKKISVRHSNFGANAPLIGSIAIVSYNFFNGSINFY
>gi|260687454|ref|YP_003218588.1| ferritin [Clostridium difficile R20291]
MISAKMEKLLNEQINHELYSAYLYLSMSSYLEAEGLKGFSNWFYVQYKEETDHAMFFYKYLHNVGGKVQL
DAIPMPDSDFTSAMDILERTLAHEKKVTALINNLAAVANSESDFRTSQFLLWFISEQAEEETNCEDNIKR
VKLAGEGGLFFVDQEFANRTYAAPTNPPVTI
>gi|260687455|ref|YP_003218589.1| putative acetyl-CoA synthetase [Clostridium difficile R20291]
MSLEKLIRPKSIAIVGVTDKLGFGRSAALSIVKSKETDRVYYVNPKREELFGRKCYKMIQEVPEVVDCVV
VCTPRNVVPSVLKDSGELGTKAAVVYASGFAEEGTEEGTDLENQLIEISNTYDMKILGPNCMGLLNCIDK
VNLWAGGSKWALDTKKPGIGIVGQSGFITAEIVSSDYFNISYGFSTGNGNIVTLEDAVDFLVDDDYASVI
AIYLEGLKNPQKFIDALKRAAQKRKPVIILKSGRSEKGAISAASHTGNLAGSSKAFESIFEKYGVISVEN
LEQFMCLAQAFSVLDGNLPANSNFAAINFSGGENTICADLAEENGVELAEISSETKEEMKKYLPGFATPK
NPLDATTALFHEKDMIVGLLHTFEKDDSVGFTMVGANIRDEENEMHETLCKAVSEAREQGLKKPVFAVPT
LEGNRYLDYRTRLEDNQVPIMSSVGTTFTCFNKMAKFIDYDYSKRTLEFKAVKKRESNNVVALSELDSKI
EMKKYGVPVPGQGNTKSIDELDEILKYIKYPVVLKINSSEILHKSDVGGVKIGIKNRDEAVDAYNEILTN
VKKAKPDANIDGILVQEMVESGIEIIIGITNDDQFGPMLLVGLGGVFVEVFKDTTLYPLPINHDEAIMML
KKLKSFKLLNGYRGSEPCDIDALADMMVKLGKYAYENKDEVKEIDLNPVFVYPKGKGVCAVDALIVKYK
>gi|260687456|ref|YP_003218590.1| putative subunit of oxidoreductase [Clostridium difficile R20291]
MEKELVFAGFGGQGVLTLGLIVAESALELGKQVTWMPAYGPTMRGGKAYSVVKFSDESIGGPDMEEIDVL
VAMNKPSLDYINLVKEGGTVVINTSAIDENVTLREDISVVKINCQELAQKVNNPKAANIVVLGALIAKTG
LLEKELALKTMCDFFEEKGKGKFNVQNEAAFMEGYNNAI
>gi|260687457|ref|YP_003218591.1| putative subunit of oxidoreductase [Clostridium difficile R20291]
MATEKLTPSVVSIPNKFCPGCGHGIVNRIIAEVIEEHGYEKNHVLTLGVGCVCNMNFSWNGDKMQTAHGR
ASSTAIGVKVALPDTLVMTYQGDGDAYVIGLSETLNTAYRNHNVTVFVINNNNFAMTGGQMSWTTMPGQV
TTTSVNGRDIKTTGSPLKVPEMVANFFDVAYVARGSVHSPKEIINLKKYIKNAIEAQLNGEGYSLVEILA
PCPTNWGVSLEKSIKWMEEEIVPYYALGEFKQRDGE
>gi|260687458|ref|YP_003218592.1| putative subunit of oxidoreductase [Clostridium difficile R20291]
MKKMWKGNHAIAEAALRGGCEFYAGYPITPQTEVMEFLSHRMSELGRTFIQSENEMAAIYMVYGAYASGM
RSMTSSSGPGISLKQEGISYLCANHYPCVIVNVQRWGPGLGSLDSAQTDYLRDTRGGGNGDYHLIVYAPN
SIQETVDLMYNSFDVAEKYRVPVEILTEAALGQMMEPVEFPEFKKREGDLGWTYDGSNRDHAKVADNQKP
TFCMEKRMRITENEQQWEDYQVEDAEYVFVAFGIPSRTTMNAVRRLREQGEKVGIIRPITVWPFPYKAFE
KVSKDVKGFISVESTDTGQLVEDVALASKKVCKENVPVYGLFSGNHIPKTLQVMDTYSKIKSGEIKEVF
>gi|260687459|ref|YP_003218593.1| putative oxidoreductase, ferredoxin subunit [Clostridium difficile R20291]
MKRGVDMNLKINAERCKSCEYCVISCKKGALKISSKINKEGYAHVEVDESKCILCGICYQVCPDNVFEII
KEKACQEA
>gi|260687460|ref|YP_003218594.1| putative histidinol-phosphate aminotransferase [Clostridium difficile R20291]
MIEKLLRNTVKELHQYVPGEPIEKVKEKYGVKEIIKLASNENPLGPSPKAIEAMIEMLKQGQLYPEPEAN
ELRRKLAEKLDLKPENFIVANGADNVITLIGEAFINRGDEVIYCNPTFPSYRTATIKNEGIPVEVPLTED
YKYDLQGILDKITDKTKLICVCNPNNPTGTIVDDKELEEFLKKVPENIITILDEAYIEFLTVPNYVDGLK
YVRENYNVIVTRTFSKIYGLAGLRVGYGIAKDEIIRTLFTVKEPFSANRVAISGATAALDDEEFIKETYE
LNRVGMTYFKEEFTKMGFDVVDSQSNFLYVDMKTDIPKLFEDLKKRGFVIRPSATHARVSIGTMEENKKF
VAVLKEILNIKGEPSIG
>gi|260687461|ref|YP_003218595.1| lactose permease [Clostridium difficile R20291]
MSSQESKPKGNLISNFRDDMRDPKKRAIYTYSSSINLAYNFIGYFVSTVTNIFLTDVAKLGVIMAGGMQI
IQSFIKIAVAPITGTVFDKQPFKKGKYYPWLRYAPAALALTYGIFFIVPLMKISPALLLPLMTALLLIAS
CAQQVVFTIIYAIYPVVAKTPRDRVIGSTTTNIFKEVGKFLVGFSYPLLLVLFADVLGGEGMGYLGTYLF
FAAGCLLVFWFSSTEIIKSGAEEEVLQKEEKPKIKASEMAKALFTNVPLMMAFCLEFLICIRSIGLGPLA
PYYFKYVIEDERGLAVFLSIMPLVSVAFMFFAPVFIKICREQKLASIISFSICALCHLLVAWTPWGKTTL
GVTMLLAIGGGFSNVVSIINLNFFAGSCDYGHWKSGKDLPGLSMSLYPVAIQVGVLLATTIRTVLMNSMG
YQADMVVTEAVKSGFINMISYSMAIPLIIAVVIAILYPVSDKKLNQIREELNQRNA
>gi|260687462|ref|YP_003218596.1| putative sodium/solute symporter [Clostridium difficile R20291]
MLLLIVTCAIYIWIGFYFSKKVKTASDFLIAGRNLPLPILAATIAATSFGGGCLVGGVQWGAERGLWVGM
YSTIGAALACFINAFFAGKLRSLSCDITPADYIETRYGHSVFLRAYQSLVTPISILAIMGSQLISFGSVS
TAFGIPYDIAVIIGVIVIIIYTYTSGMWGVAVSAFIQLAICIVFLPIVAYISLKLVGDNPLLMLQSMVKE
PFFPGNKSISDFMYTVLPLVLGSIFSYESFLRYQCADNAKNAVKSSVIAGFILLFLAFPIGIIGAIGGSL
FPNISSVQVLPQMISTTLPPLISVLFLAAILAAIMSTADSLMTSMSAIISRDIYNKLLHPNIEFNDLKNT
LKYSQIASALTAIIGAIIALKFDSLLELLFWPAPLCTGVIFAPFVIGLCWKGATKKGAIYAVIVSVILAL
LNMIGILTVFDRILVPIIGGSITIFIVSKFSKKD
>gi|260687463|ref|YP_003218597.1| TetR-family transcriptional regulator [Clostridium difficile R20291]
MSKSEKGKETKASIISAARELFFEQGYHKTTTRQIAERANINLGLISYYFSSKSEIGAIIYEDIRNEMQS
LIYNYHEEGTMMMFFLAMNADLCFLLKNEAYRNFYLDIAYEEAILSYQRSVTEMVMKRYVNDKESIEHDE
LILSCIGILAMKPEIIRVYTSHKYDISSQAVIKHFTKQFLINLGHSTDLCEEILEELSKYYIDIVDNFTP
IITRVRT
>gi|260687464|ref|YP_003218598.1| putative esterase [Clostridium difficile R20291]
MLFRYKIIIEEVFFVAFIECKFKSKYTGGETDIIVILPVANGKELFSGKEIYDFEGKFKTLYLFHGLEDD
QSSWIRYTNVEHYAKNKNIALVIPRVETSFYTDMAYGHQYFTFVSEELPKFVRAIFPLSDKREDNFVAGM
SMGGYGALKLALSKPKEFSAVASFSGSPDMIHELENQQIETNADILFHDFGRPEDARNSENDLLYILKNL
KERNEDIPKIYQFCGDRDFLYKNNQMFKKYAESLGVDVEYEECVGGHEWRLWNLWIKKFIDIIG
>gi|260687465|ref|YP_003218599.1| hypothetical protein CDR20291_2112 [Clostridium difficile R20291]
MKINWNTKYTTIAIYTFIIAASSIIFYLVSSQIDVFSNNLDAIFTTLQPFIIGFAIAYLLNFILKFYEDR
IFIKSEKLKKLKQSSKRGLGLLLTYATATLILYLFMHFVLPQVIESIVGLANDIPMYVNNATKLIDKLMT
DLNLDEQYFNLAVDKWNEFVTYIIKFVTDLIPILGSMLKNVASSIWNIVLGLIVSVYLLIDKEKFYGLSK
KITYAVFTEKQAARILELTHRSNYTFGRFLGGKILDSFIIGILTFVILTLVKMPYTLLISVIIGITNIIP
FFGPLFGAIPSTLIVMFVSPIKAFWLLLIILIIQQIDGNIIGPKILGDSIGISAFWILFSLLVAGKLLGF
IGMVIGVPMFAVIYSIIKDIVESKLDKKGLPTDTSDYM
>gi|260687466|ref|YP_003218600.1| aldehyde dehydrogenase [Clostridium difficile R20291]
MDIKELVKMQRKYYNTGKTRDISFRIEQLKKLKLVVSQNEEKILLALKKDLNKSNFEGFMTEVGMFYSEL
NFAIKNIRKWSKIKRVKSSMVNFPSISKVVPQPYGVTLIMSPWNYPFQLALIPLVWSLAAGNCVILKPSE
YSVSTSSVVKDIVENTFSKEYVAVVQGSQEESEKLLLERFDYIFFTGSTNVGKIIMKSASEHLTPITLEL
GGKSPCIILKDANIDLTAKRLTWGKLINAGQTCVAPDYVLVHEDRKNELIEKIKYYTNKYFGDNPCNNEQ
FPKIINQRHFNRILSLIDKDKIVYGGNYNKETLKIEPTIVDNVNWDDNIMKEEIFGPIFPILTYKDLDEV
IQKIIQMPNPLALYIFTKNKYLENKLLEMIPAGGCCINDTVTHIATNYLPFGGIGESGMGSYHGKAGFDT
FTHYKSVLKKLNLDVPIRYAPYDNKLIKVLKKIM
>gi|260687467|ref|YP_003218601.1| putative flavodoxin [Clostridium difficile R20291]
MTSERGVIYMKSVVVIYKSKYGSTKKYAKWLSELLSCDIFETKNINIEKVMKYDTIILGGGLYACNIAGI
SFLKKNYKDLQKKNLVVFGVGAAPYDDEVIKKLREVNFKDELNKVPCFYCRGAWDETKMSFIDYTLCSFF
KKSIAKKERQGLKPAEAPLLSGEAFDWCNKENLTPILNYIRKL
>gi|260687468|ref|YP_003218602.1| MarR-family transcriptional regulator [Clostridium difficile R20291]
MDAESLMKKYMVDDDSRKQAIFASIFVMQNKLQTTCDKLDPELTMKQWLLLAIADSVDETLTLTKLGELM
GCSRQNVKKLAIALEKKGFIQIEQNEKDSRAICLVTKDRVQEYSKKVRGMQEKVLQLLFEDFTEKEVEQL
FFGIMKLSIGIENVKNYVENNDVGE
>gi|260687469|ref|YP_003218603.1| putative GTP-binding protein [Clostridium difficile R20291]
MDMTKKGITVGLNINNKSEDFNELMIELENLCSACDIDVVGSITQNAKQVNRAFYIGTGKVEEILNLIKK
ENIEIVIFYNELSTSQLKNLEEKLNCEIIDRTALILDIFAQRAKTREAKLQVEVASLKYMLPRLIGSNEN
LGRQSGGVGTKNRGSGEKKLELDRRRIEEKITSLNRELYDLKFQRETQRSMRRKSNLPNVALVGYTNAGK
SSIMNKLVDIFKNSEEKKVFEKNMLFATLETSVRNIVLANNKEFLLSDTVGFVSNLPHDLVKAFRSTLEE
ACEADVLLHVIDISNPSYKSHIKVTEDTLKQIGADGIPMIHVYNKIDLIDVEVLDRILDSIDKEGIFVSV
KKDINIDKMIKCICDSIFKDCVRCKFLIPYDKGHVVSYFNENTSIINTEYREDGAILDVECSNIEYNKYK
KYALE
>gi|260687470|ref|YP_003218604.1| ABC transporter, ATP-binding/permease protein [Clostridium difficile R20291]
MGRGPMGKSMEAGQKANDFKGTMRKLIAYLSKFKISIILVIVFAIGSASFSIVGPKILGKATTKIFEGLV
SKVSGGNVGIDFNAIGKILTFLLFLYLISALFSFIQGFIMSGISQKVSYNLRKEISAKLDRLPMKYFDTK
THGEILSRITNDIDTLNQSLNQSMTQLITSVTTMIGVLIMMLSISGIMTLVAVLILPISMFVISRIIKKS
QKYFRYQQEYLGNVNGQVEETYSGQTIVKAFNREDEVIEEFDKLNDSLYNSAWKSQFLSGIMQPLMMFIG
NLGYVMVSILGGWLAIKKTIEVGDIQSFIQYVRNFTQPMTQIAQVANLLQSTAAASERVFEFLEEEEEVQ
IVENAVSIDGLEGKIDFENVNFGYNPNKTIINDFSVNVKPGQKVAIVGPTGAGKTTIVKLLMRFYDVNSG
SILIDGHNIKDFNRSELREMFGMVLQDTWLFSGSIMENIRYGKLNATDEEVIEAAKSAHVHRFIKTLPDG
YKMKLNEEASNVSQGQKQLLTIARAILADPKILILDEATSSVDTRTEVLIQKAMDNLMEGRTSFVIAHRL
STIRDADMILVMNEGDIVEQGNHEELLKKGGFYANLYNSQFEEDEAM
>gi|260687471|ref|YP_003218605.1| ABC transporter, ATP-binding/permease protein [Clostridium difficile R20291]
MFKLIKYLKKSALSIVIIVCLLVIQAVCDLSLPEYTSNIVNVGIQQGGVENSVPSVIRESELNKITLFMD
KSSKDKVLDNYTLLNKKDYVKYKDKYPGLKDESLYELNTKDKDTIDDLNVIFGKAILIVSGLEGDSKEVK
AMKAQLMSKLPPQATQSGDVDIFKLLSAMPKEQLDTLTKEMSKGFESMPESMITQSSVSYVRSEYEKIGI
DTEKTQNNYILFTGAKMLGIAMISMVATITVGFLAARVAASVGRNLRSGVFRKVMSFSNTEMNEFSTASL
ITRSTNDIQQIQMLMVMLLRIVFYAPIMAIGGVIKVLNTNTSMAWIIAVAVVAILSLIVVLFSVVMPKFK
LVQKLVDKLNLVSREIITGIPVIRAFSTEKHEEERFDKANKNLTKTNLFVNRVMTCMMPAMMLIMNLITV
LIVWRGAYSVDSGAMQVGDMMAFIQYTMQIIMSFLMISMVSIMLPRASVSATRIDEVLVSDISIKDPEKS
EAQEFKEDKKGLVEFKNVSFMYPDAEEPILTNISFTAKPGETTAFIGSTGSGKSTLINLIPRFFDVTEGE
ILLGGVNIKNVSQHDLREKIGYVPQKGVLFSGTIESNLKYGRKDATDEEMRTAAEIAQATEFIDSKPEAF
KTEISQGGTNVSGGQKQRLSIARAIAKNPEVYIFDDSFSALDLKTDAALRKALKSKTAESTVLIVAQRIS
TILNAEQIIVLNEGEIVGIGTHKELLKNCEVYEQIALSQLSKEELANE
>gi|260687472|ref|YP_003218606.1| MarR-family transcriptional regulator [Clostridium difficile R20291]
MNSNSEEKLNDVFLQLMRIYFIRTHFYFDKLGLYHGQPQILFSLKMKDGQSQKELADKRKVKASTTTVMI
KRMEKAGLVERKQDEKDQRVSRIFLTDKGLEICNKVEEFNKELEREFFLGFSEEEKIVLRRLLMQVRDNL
KAGCHKHEDEKYF
>gi|260687473|ref|YP_003218607.1| putative carbonic anhydrase [Clostridium difficile R20291]
MYILYFNSDIIIKKFLKRVILHMRKLEEILEYNKSFVENKEYEQYVTSKHPNKKIVVLSCMDTRLTELLP
KAMNLKNGDVKLIKNAGATIMHPFGSIMRSVLVAIYEFDVDEVMVVGHHGCGMCNVDTDKLLGKILDRGI
SNDVILTLRSAGIDTKQWLHGFDSAEESVKDSIDLIKGHPLIPDGIIVHGLIISPETGKLDVVVNGYEDK
>gi|260687474|ref|YP_003218608.1| putative regulatory protein [Clostridium difficile R20291]
MANIGKIIGDRIKVYRTKLGYSQEFLAEKAGLHPTYIGQIERAETNTSINIIMKIATALDIPLELLFANI
ITTEGVDNSVPLECYEMINKLTEKEQIAMLELIKCIIKYKEI
>gi|260687475|ref|YP_003218609.1| putative regulatory protein [Clostridium difficile R20291]
MNYIGKRLKEERKKANLTSKEFANMVGVSPWYITQIESGKKNPSLKTFIKFVNILNISADVLIKDITSTG
KTYLENDINEELKDLNSRELNLISQIIDIIKKNKI
>gi|260687476|ref|YP_003218610.1| hypothetical protein CDR20291_2123 [Clostridium difficile R20291]
MIVIEGSDKFKIAKEYIDVEYTLFSKVTFRYEKLKFKDNAELEKIKMFKYKNGYIPNKLNLSFGYGFSSY
KKQIIRETVDTLRLTEIFSSENIEDIKFIKDGTKKLEISIEKVVKFKRRKKRNYVCCYCPDMYRDIKLDK
ESINKIYNRKIKIEREVNIFEDEDVIINKKVLKFPKSWTKNMQKYWLSENKYPIHSTVIDDDRYKCCNVQ
YTKNRVIILYYIYNH
>gi|260687477|ref|YP_003218611.1| 3-dehydroquinate dehydratase [Clostridium difficile R20291]
MEENMKRKVQVKNITIGEGRPKICVPIIGKNKKDIIKEAKELKDACLDIIEWRVDFFENVENIKEVKEVL
YELRSYIHDIPLLFTFRSVVEGGEKLISRDYYTTLNKEISNTGLVDLIDVELFMGDEVIDEVVNFAHKKE
VKVIISNHDFNKTPKKEEIVSRLCRMQELGADLPKVAVMPQNERDVLVLLEATNEMFKIYADRPIITMSM
SGMGVISRLCGEIFGSALTFGAAKSVSAPGQISFKELNSVLNLLHKSIN
>gi|260687478|ref|YP_003218612.1| streptogramin A acetyltransferase [Clostridium difficile R20291]
MTIPNSNKVYPRSNDYQTVYLKNVITRENIEVGDYTIYNDFYNDPRDFEKNNVLYHYPINNDKLIIGKFC
SIACNAKFLMTSGNHSMKSKSTYTFPIFYEEWKLDINHITDAWDNKGNIIIGNDVWIGYDSIIMSGVNIG
DGAIIGTRAVVTNDVSPYSIVGGVPAKIIKKRFNNDTISKLLEIKWWDWPYKKIQSNIKHIQSGNIDKLV
>gi|260687479|ref|YP_003218613.1| putative radical SAM superfamily lipoprotein [Clostridium difficile R20291]
MEYDMPLYRPPSEAYSLIIQVTLGCSHNKCTFCSMYKSKKFKIKPLEVIKNEIDIFRRYYKHVERIFLAD
GDALIIPMEKLRDIILYIKEVFPECERITMYGSPKSIEKKSDDELKELRKLGVKMIYLGLESGSNEVLED
IKKGFSSEQLIKVGRKVKKSGIKLSATVIAGLGGTKKTHQHAVDTGKMLGAISPDYVGVLSLMVEPNTEL
YDLLKAGEFTILEDKAVLQEIKEMIKNIDANEKIVFRSNHASNYANLKGVLPDDKQRLIDEIDYYLSNQK
LKREEYRRL
>gi|260687480|ref|YP_003218614.1| hypothetical protein CDR20291_2127 [Clostridium difficile R20291]
MGVRFMSKDVKVKRNKKYDTFSITMELERPLLYDEVENKDDKNNNRKFNIKNKIFKGIGILFVLILLGFF
IWINKTYEPQKLAKEALVSNSKVEVTVNENISFTPKGRKVSKGLILYPGAKVEIESYAPLARKIAESGYE
VVIVKMPLNLAILGTNKAQKVMDSYNNIEHWVIGGHSLGGVAASNFARDNKLIEGVVFLASYPMGDELKE
LGKKVISIWGSKDGVVNFKSLVESKQKLPDDTTYVEIEGGNHAQFGDYGKQKGDNDAIISQEKQLNITAN
SIIKFLKNIS
>gi|260687481|ref|YP_003218615.1| hypothetical protein CDR20291_2128 [Clostridium difficile R20291]
MMTKKLVISKTKLFIFIIAFISIFIYLFGSKNTLIGVGIVTAMLTLLERDLTISPIKNLLKYLAINIILG
ILSFFAVQNMYLGVLLNFIALFIIGYVFSYDLKRAVYVPFGLMYIFMVSIPVGKSEFPMRLSALAVGAVI
IMIAQFVMNRNRMKNVGDKELISICDELLEKISLLKNTINDDSSIIKSSMRKIDSCNYRINSISKNLKMV
IFDNRKDDFYISIRGIDIMNILFSLERISLIMERYKKDSKEFEDEDIKNILEESSINSKSDVLVVATKEI
NYIKMCLENKDTITDKEILGFRDYVIAQDTKNINLKEIYSVLENLYEFLVDYKKVKSRDEKKAERKSKIP
HEFKRLSIYKKNFNLNSIRFSYAVKIALATAVAGFIMDYFHLRDGRWIMLTVFSLTQPYAENCIQRSRKR
IEGTFIGAVIFIVLFSIIKDSTLRSLIVLLAGYINSYVVDYRKLMVCVTVSALGSAVVMGDPNVLTISRI
SYVALGAIIALIVNKFILPYDAKTGYQHVIEMYKGIVKNIIDEVNKSIENVADVYYIKNLLLIPSLIEDR
LMLINAIYKDKHQEDFLENQKLLISNMYNLYINVNKNKIKDEDVEKILRDTNYISNYNVDKYDEGRSVIL
ESIVNTKSLGDKIICLNLLQTLNGVKEMYRISNITKVSIKEAA
>gi|260687482|ref|YP_003218616.1| putative nitrite transporter [Clostridium difficile R20291]
MHKETLDKLTNAAINKINLLNTSKVKYLVSSAFAGLYVGIGILLIFTIGGLLTDAGSPMTKIVMGLSFAI
ALSLVIMTGTELFTGNNMVMSAGMLNKGVSIKDTSKIWAYSWVGNLIGALVLGLIFVGTGLVDKGPVAEF
FANTAASKASMPFTALFFRGILCNILVCVSVLCSFRTNSDTAKIIMIFLCLFAFITSGFEHSVANMTIYS
VSLFSPTISTVTIGGAIYNLVAVTLGNIVGGALFMGLGTYILGKEKLN
>gi|260687483|ref|YP_003218617.1| anaerobic sulfite reductase subunit C [Clostridium difficile R20291]
MIRDLNTKKVMKNAYRITKTKYETSLRVRVPGGLIDPESLAVVSKIASEYGNGQVHITTRQGFEILGINM
EDMEEINKIIQPVIEKMNINQSEKNAGYPAAGTRNIAACIGNKVCPKAQYNTTEFAKRIEKAIFPNDLHF
KVALTGCPNDCIKARMNDFGIIGMALPIYEKDRCVNCGACVKKCSKISVGALKTENNKVVRDKDKCIGCG
ECVLNCPTNAWTRDEKKYYRLAIMGRTGKKNPRLAEDFLLWVDEDSIIKIILNTYRYVEKYIDKDAPGGK
EHIGYIIDRTGFMEFKKWALEGVELPEITKMYENIYWSGIKYL
>gi|260687484|ref|YP_003218618.1| anaerobic sulfite reductase subunit B [Clostridium difficile R20291]
MNPYIPVSAKILDIVKHTDKEWTFRVNCNTKGVLPGKFYEISIPKYGESPISVSGYGEDYIDFTIRNVGK
VTSELFNYKEGDSFFIRGPYGNGFDVSLYEGREIVVVAGGSALAPVRGIVEYFYNNKEKCEKFKLIVGFK
SPKDILFADDLKRWSKKLDILVTVDGAEEGYSGNVGLVTKYIPELDMKDINNTSIVVVGPPMMMKFTVEE
FLKRDLDEKNIWVSYERKMCCGIGKCGHCKMDDTYICLDGPVFDYSYAKNLID
>gi|260687485|ref|YP_003218619.1| anaerobic sulfite reductase subunit A [Clostridium difficile R20291]
MKLKLDSSKFNEGLNYLKKDYKIFAPVLIPFKGTFSDTDVIRYKEVNAFEEMEFAKKANFSPKEVVLPIN
QVLFYFTEKEFKESDLDNKKILIFLRACDINGIKRLDEIYLNNGEEKDYFYKNIRDKVKFALVGCKESFR
NCFCVSMDSNKTDNYSIGLNIEGDTLYLDIKDSEFEVFNGEATEFNVDYVTDNLISVDVPENIDSNEIIG
NSIWDEYDTRCIGCGRCNFVCPTCSCFTMQDIFYKENENVGERRRVWASCQVDGYTDIAGGNSFRKKQGE
RMRFKTMHKIHDFKKRFGYHMCVGCGRCDDACPQYISFSKCIEKINDLVISKEEV
>gi|260687486|ref|YP_003218620.1| cAMP-binding regulatory protein [Clostridium difficile R20291]
MERYYMSKLKDYNIDKVIIFNNLSTKTKNQLKEKAKLKRLQKKEILFYEKDSLDSVYILLEGKVSIFKIS
ENGERKVIFILNSGEVINDITFDSSKNSTVGCEAFENSIVAYYSIEEFLEIMQNDFQLTKDIISYMERRI
RRLYRQLKNSISIKVDKKLAAKLYRLSREFGVCCGEWTLLNVNITVTYLADMLGCKRETVSRMIKVLQKE
ELIKIDNKGFYVKETELSRYFKNN
>gi|260687487|ref|YP_003218621.1| RpiR-family transcriptional regulator [Clostridium difficile R20291]
MSILEQLESPTFKVTKSDKLLIAYIKENIDDVFYKPISQIAKESNIGEATITRFVKKMNFNGLQDFKVTL
AQEISTINKKNIINKNIQNDEPALDTAKKLLSSNVTTLENTVEIINSKDVHDCARLIINAKKVYFIGIGY
SGIIAQDSNYKFMRIGLNCVSFDSSHTMIMMSSIMEEGDLIIAISHSGETEEIIKTVKLARANNAKIISI
TENKNSELKDISDVHLSYVSGETVLETGSISSKLAQFFIIDLVYTQVVKELSNEAIERKIKTTNAIKLFK
NE
>gi|260687488|ref|YP_003218622.1| putative glucokinase [Clostridium difficile R20291]
MKNYVCIDVGGTSIKYGFIREDGFIIDKSSLDTEAKEKGGEGILAKIKDIVKKYIEENEISGICISTAGM
VDPVEGKILFALEELIPNYKGMQLKKEVEKEFNIKCEVENDVNCAGLGEVWLGAGRGATSSICLTIGTGI
GGCIIINNKLINGFSNSAGEVGYMNINGSSFQELASTSSLIKKVAKIKNLNEKDLNGKIIFDLAKNNDED
CLKELDNMIKSLAVGIANICYVINPEVVILGGGIMAQEKFLKPKIDKALKEVLIERVYKNTNIEFAKRQN
DAGMLGALYNFLNKI
>gi|260687489|ref|YP_003218623.1| hypothetical protein CDR20291_2136 [Clostridium difficile R20291]
MENIDVFLLIGQSNARGLGNPKESIIPNENCFEYLSTDEIINMRCELETSEGDGTIAPAFSNEWNKLTGN
KVCFIHNAKDGSRIKNWNHDNNWFLNDTIEKFNTGCTTLSKHYNIENKYVIWIQGESDAKYGSDALYYKE
SLKKIAYRLKEECMIDKMFVSLTGYWLGEDEYFIRTRRIAAAQESACNECDILCVGSKIAMQFHDRGLTI
DDVHYTQEGLNMLGEDLCKNIYKYHITKEKSVLSDTIDLSEARKYICELEKISKRFV
>gi|260687490|ref|YP_003218624.1| hypothetical protein CDR20291_2137 [Clostridium difficile R20291]
MIFGNINHSKTYSTLHEDLLRCFEYAKDNSLIDYEKGTYTIDGDDIFVNIVEYKTCEKEDRFWEAHKKYI
DVHLMLDGCERIDINFIENLEQKIYEEKGDFLPLDGKNNGYMELRKGDFLVCYPEDAHMTGIKVLEKENI
KKAIFKVLVR
>gi|260687491|ref|YP_003218625.1| putative sodium:solute symporter [Clostridium difficile R20291]
MVGFTWIDFAILVVYLLAVLFAGLLFSKKEMKGKEFFKGDGTIPWWVTSVSIFATLLSPISFLSLAGNSY
GGTWILWFAQLGMFIAIPLTIKFFLPLYSRLEIDTAYEYLEMRYESKGLRVLGALMFIIYQIGRMSIIMY
LPSVVLAGLTGIPVNVLIVVMGVIAIIYSYTGGLKAVLWTDFIQGMVLIVGVTGTLFYLIASINGGFGTV
MDTLTTGHKFLASNEVMFDKNILSTSAFIIFIGAGLNTFSSYVSSQDIVQRFTTTTDIKQLNKMTYGNGV
LSMGLATVFYLIGTCLFIYYTQNPDLAQTVQQDQVFASYIAYELPVGITGILLAAIYAASQSTLSTGLNS
VATSWTLDIQTIITKDISMEKQTKIAQYISLGVGILSIAVAIVLANGEIKSAYEWFNSFMGLVLGVLAGI
FVLGAFCKKATKMGAYVGFIVSAILVVYLKYRMPEVTSWAYSLITITTSVVVGTIVSAIEAKVKAKVSLP
KAETTVYYEK
>gi|260687492|ref|YP_003218626.1| N-acetylneuraminate lyase [Clostridium difficile R20291]
MRTTDMKGIYSALLVSFDKEGNINEKGLRQIIRHNIDVCKVDGLYVGGSTGENFMLSTDEKKRIFEIAKD
EVKEEIKLIAQVGSVNLKEAVELAKFTTDLGYDAISAVTPFYYKFDFEEIKHYYNTIINSVDNRLIIYSI
PFLTGVDMSLDQFGELFENEKIIGVKFTAADFYLLERMRKTFPNKLIFAGFDEMMLPATVLGVDGAIGST
FNVNGVRARQIFELTKNEKISEALEVQHVTNDLITDILGNGLYQTIKLLLEEQGVEAGYCRQPMKEATDE
MKSRAKEIYRKYF
>gi|260687493|ref|YP_003218627.1| putative N-acetylmannosamine-6-phosphate 2-epimerase [Clostridium difficile R20291]
MLDKVKGRLIVSCQALENEPLHSPFIMGRMAKAAMEGGAVGIRAQGVEDIIEIKKVTGLPVIGIIKRNYE
DSDIYITPTKKEVDELLTTGCEMIALDATNRVRPNNEDLKELIKYIKENGVLVMADISNYDEAIKAQEYG
VDCVSTTLSGYTPYTKTLEGPDFVLMERLVKDLEIPVIAEGKVNTPQDLKKVFELGVHSSVVGSAITRPQ
LITEKFVKAIEIN
>gi|260687494|ref|YP_003218628.1| hypothetical protein CDR20291_2141 [Clostridium difficile R20291]
MEGNTNNKVDDKFSKVKKKFGSGKFKVELYKEKSKLNREIDDIQEKKAKIFLEMGILTYQKIREDSINDN
SFDKFCDELLELDKLIYEKNMEINEMEMAESNVTCECGYVGNVNDKYCAECGKKFELENECDDFIICGYC
ESEIDTEAEFCPCCGRKIIMDLE
>gi|260687495|ref|YP_003218629.1| hypothetical protein CDR20291_2142 [Clostridium difficile R20291]
MGEKKINNMNYSHNNYSKKTGEPTRKIKNSHITLKSKEEKICSSCNKENNTKDNYCKFCGNELYEIASLR
PLETKLDLKSKIKELSYHANKRGVFLTTFTTIFILFIIALIFKAIITIQFNDISYLINPAHIILALNLGQ
ISVSMSTMMGSGFINANIGLLILLIIPILVLLISNLIFMRKRCRDSKTVLANSLGVGIFYGLVLAILSIF
TNVKTSSHSMLEYGYALEYSYEFFSVLLNGFVLGFICTYITTYKKSYEKENMYLSLFSNSIRTFILGYVL
VLVILLVLTISDSSYLNELDMSSYSNGLNLFTILPQIASYMWAFANGISVTIINSTVSMFTLSSSSLFGD
TKLMFYAMGALSMLILLLNGYKLRFKYNTDSIRPIIVFSIYYAFLMGILALFSTFILDSNINFFNTTNYG
TTLIMQFKVLQAIVISFVYSFVISLIGYKLNSAD
>gi|260687496|ref|YP_003218630.1| putative signaling protein [Clostridium difficile R20291]
MIERNTYFYALFLMEAYMNLEKIKKFFGFPLDKKHKENVEKELCNYLYHTGKIICIIIVISQIIMMISIS
AREGGPFATPRRQWYFYMYVTLFCVSSVFMFVFSYLWNKKKDCCTFYINLWIIYVTFFCLWGCVITLLDQ
LGGNDLSVFSYIMLAAAAFSVLKFGESVIVFGGCFLFLNLFLPGIQTIPGNEFSNIVNTFFITSLAIFVS
TMLYRNRVFTYYDKLLISQQYEEISHINNLLNDKVMTDDLTKMNNRRYLEDILQKKLISHANQEPITGMM
IDIDYFKQFNDNYGHQKGDYCLQNIAKVILDFTSSENEHAIRYGGEEFFICIFNCDETDAKLKSECLRKI
IESCNFERDDVPLKCVTVSIGVYTKKIEKAITLNEFISNCDKALYTAKEQGRNCVAFY
>gi|260687497|ref|YP_003218631.1| asparaginyl-tRNA synthetase [Clostridium difficile R20291]
MQKEFITVKELYREKEQYIGKTVKVAGWIRTSRVSKNFGFIELNDGSFFKNMQIVFDEKVENFKEVGKLA
ISSSILVEGELVSTEGAKQPVEIHAKSIVVEGESDSSYPLQKKRHTLEYLRTIAHLRPRSNTFSAVFRVR
SIAAYAIHKFFQERNFVYAHSPIITGSDCEGAGEMFRITTMDLNDIPKTEDGKIDYTQDFFGKEANLTVS
GQLNAEIMALSFRNVYTFGPTFRAENSYTGRHASEFWMIEPEIVFADLEDNMELAEDMIKYVISYVLENA
PEEMEFFNSFIDKGLLERLNKIVNSEFIRITYTKAVELLIESGHEFEYPVEWGCDLQTEHERYITEQIYN
CPVFVTDYPKDIKAFYMRMNEDGKTVRAMDLLVPGVGEIVGGSQREEREDVLLDRINEMGLREEDYWWYL
ELRKFGTATHSGFGLGFERIIMYMTGMSNIRDVIPFPRTPKNAEF
>gi|260687498|ref|YP_003218632.1| hypothetical protein CDR20291_2145 [Clostridium difficile R20291]
MIVLESKKARALKGKDNKRLKSSLLVGNESTAAWADVEKLKPHSKVSIPSIKGVEEAKDWVDNGSKL
>gi|260687499|ref|YP_003218633.1| putative germination-specific protease [Clostridium difficile R20291]
MEKSYCIIYQGDIESALQENGINRYMVLNSQLAVIYVPVDFDETILNNIIQVAWWEESEPMSSLIEITNN
VNNGETITTAAETDYIYENPYNDITGRGILLAVIDSGIDYLHPDFINDDGTSKVLYLWDQEANTNPPPEG
FIFGSEFTRSQLNIAINRNDGSLSQDNIGTGTLVSGILAGNGRINSQYRGITTESDLIVVKLKSYTDTYY
AGRINYSVSDFLAAITYVTNIARTENKPLIINLTIGVKSSAVATTSILDTFNILSSAGVVVVSGAGNQGN
TDIHYSGRFSSVGEVQDVIIQDGDDYALDITLNTNGPDKVGAQIISPSGEVSHDIRYSPDFYIYRGKFNL
ENTTYAMRFIYPYITSGKENLEIRLRDIKPGVWILRLTSELIISGEYDIYLPNKNLIAPDTRFLDPDSVA
TITMYAASDDVITVGTFNNKTDSMWIGSSKGPIRGRGIKPDIVASGVDIISTYKNGTYNTGTGTGVSSSI
VTGVLALLMEYLEKQDNVPRLSLFTQVLKTYLILGATKLEIYTYPNVSQGYGILNLKNTIQQIANTL
>gi|260687500|ref|YP_003218634.1| putative germination-specific protease [Clostridium difficile R20291]
MIIINYELIVKYNGDILRLEEELGVSVEILNSSYAIITSSNEEDVNTLLTYPEIEFIEKPFILQTQDVQS
FSSTGITGFKNRTGLTGKGTIIGIIDSGIDYTLPVFRDSDGRSKILYYWDQSIQGNPPEGFREGTLYTNE
DINNAIDGSMYIPISTTSLHGTHVAGICATIASDARIIVVRVGNIQTDIFSRSTEFMRAIKFILDRALEL
RMPVTLNISYGSNEGSHRGTSLFEQYIDDMCLFWKNNIVVAAGNNADKGGHKRIRLQNNITEEVEFIVGE
GERILNINIWPDFVDDFSVHLVNPSNNQTQAISLTSGEIRNTLGETRITGYFYPIAPYSLTRRVTLQLSS
NTQITPGLWKIVFEPIDIVTGNVNIYLPTSEGLNRNTRFLIPTQELTVTVPGTASRVVTVGSFNSRTDIV
SIFSGEGDTQLGVFKPDLLAPGEDIISFLPGGTSGALTGTSMATPHVTGVCSLFMEWGIVNGNDLFLYSQ
KLRALLLKGARRLSNQSYPNNSSGFGFLNLSDIDLYTLSSINQDLETEDIGYRSINKSFKDEENRYKFID
GYNIQIHNDLENEIYISKNASRQSGILSGIDVVHTPEFEEELAGLGMSQNFFKISDSLGVLSINNTDYSS
IQRVLQLPSIIRTVSTTKMTLLGEINRGTFGGVVATEEMGVNFFKNNPNINITGRGTLISIADTGIDYLH
PDFIYPDGTSKIVYLWDQTKEGTPPDGFYIGTEYTREDINRAIAENDPSLSQDEVGQGTMLSGICSGLGN
VNSEYAGIAEDSELIIIKLGKIDGFYNSAMLFAASQYAYKKAFELRRPLVINMSLGTSSLAGLTNRSNSE
KAFFTRGLCITAGAGNEGNTQTHTSGIIPHVGGSVEVELELNEDEEELSLELWLNRPDKADVIIVSPTGE
ESKSVGISNYNKVTGLFDLEGTEYSITYIYPTTFSGQQFTNVTLKNAKRGVWKIRLVGVYIITGRYNLYL
PNRELLKSGTRFREVDPFYTINYPAIQDDLITVGAYNTINGSLWQSSSRGPTIEDRLKPDIVAPGVNIIA
AYPGNTYATITGTAAASAHAAGAAAMYFQYTFVDGRYPNQAYVQKIKTFMQAGARKDSNTVYPNTNSGYG
LLDVRGMFDVLR
>gi|260687501|ref|YP_003218635.1| hypothetical protein CDR20291_2148 [Clostridium difficile R20291]
MFIEFFYLLRSRGLNISLNEWMTLIEALDKGLCYSNFSNFYYLCRMILIKSESDFDKFDAVFLEYFKGIE
HQEEIPEEIMNWLKKPDIDLEEFERLEQNPNINLDKLRAKLEERIKEQDSPHNGGNYWIGTGGTSELGHS
GKGQTGIRIGGNSTYGRAVLEVAGERKYRDFRDDEVLNMRQFQVALKRLRQFSTRIDAPKTELDLDKTIE
ETCNNAGYLKLFFEKPRKNTVKLLLLMDSGGSMRGYSTLCNTLFQSVSKSNHFKDVKIYYFHNCIYDRLF
TTPECWLSKSINTEWILKNIDKNYKVIIVGDASMSPSELLHIGGNYRGPYNYTPGIEWLKRFKRKYSKIV
WMNPELRDGWDSINYWYQTQRMIQSEFNMFPLTVKGLEKALKNLMLSR
>gi|260687502|ref|YP_003218636.1| putative ATPase [Clostridium difficile R20291]
MIKKEISNFRGSSDYVVSPELMASVNVAIALEKPLLIKGEPGTGKTMLAQAISNELKKDLVIWNIKSTTK
AQEGLYVYDTVQRLYDSQFGGEGVDDISKYIKYGKLGEAFSSNQQVILLIDEIDKADLEFPNDLLWELDK
MEFYINETKETVRAKQRPIVIITSNAEKELPDAFLRRCIFHYIEFPDRDMMEEIVKVHFDKVEEHLLEQV
MTTFYWIRSLKDIQKKPSTSELIDWIQALTLSGMPIEKIEKEVPFAGILLKNNEDIESMQRHL
>gi|260687503|ref|YP_003218637.1| hypothetical protein CDR20291_2150 [Clostridium difficile R20291]
MQDKKIYLNIVLTVVVSYILIKVIDNYKYFFGVISLLMSLLTPFIIAFVLAYIFNPLVKFLESKLNFKRI
YSLLLTYGVLIVILISFILFTVPSIVNSLADLVAQIPTYIDKTEQFLFDLGKSLQSVDPNTLKEYGDKIM
SVMPKFSNLLIGSLGGIFSTTFSVGKFIVQFLLGFIICFYILLEKEKFLLFTKKVVYISLGKKYGDFIIE
LCQSLNLNIGKYFTGKILDSFIVGVLSGIGLYFLKSEYALLFGTLMGVMNMVPYFGPVIGMAPVVIINLF
SNPTIALTSLIYLIIIQQVEVTFIEPKIVGGQLGLSPFFTILAVTVGGGFFGIPGMILSAPVMGVIKIYF
CEFVNRRHDKIQME
>gi|260687504|ref|YP_003218638.1| hypothetical protein CDR20291_2151 [Clostridium difficile R20291]
MKKALISLLVLSCLLLTAPVNESSYADSQKNVPVSQNTKLTQEQAKELLVKYNNEVDYIYQGNASDFEAL
KAKNLNGYVFLPDADGDIGYFVNENTSEIYYFHPSGYLELVNQQQNNK
>gi|260687505|ref|YP_003218639.1| L-lysine 2,3-aminomutase [Clostridium difficile R20291]
MNEQTRISLERAAELKSKIDDYIQARKTINRGLEKEEEINKRKQKILSILNGTEEDWNNYKWQLSNRITD
VDTLSKIITLTKKEKEYIKEVGTQFRWAISPYYLSLIDPEDICDPIKLLSIPTHIELEDEQEDLDPMGEE
YTNPAGCITRRYPDRLIINVTNECAMYCRHCQRRRNIGQQDSHKSKAIIQESIDYIRENEEIRDVLVTGG
DALTLKDDYLEWILSQLKEIPHVDYVRLGTRTLVTMPQRITDEFCNMLKKYHPVYINTHFNHPMEITKES
KEACEKLANAGVPLGNQAVLLNGINNDKFVMRCLNQELLKIRVKPYYIFQSKHVKGTKHFNTSVDDGLEI
MEYLRGYTSGMAIPTYIVNAPKGGGKTPLLPQYLVSKGTDYVMLRTWEGKVIKMEDEPAVDIKKLIKEQA
QD
>gi|260687506|ref|YP_003218640.1| GntR-family transcriptioanl regulator [Clostridium difficile R20291]
MPINSFENYPMTWKPKLDNRKPPIYKTLAMLLEEDIKRGNLNPGDKLPPQRELADFLDLNLSTITRAFKL
CEEKGLICAKVGKGTFISSDVNVSNTLLYQTESKDIIELGTVHPPYEQNTYIIDFIKNVLKQPEMDRFLQ
YMSPSGTYMQKKSIAKWIERNNVYTSEENILLSTGGQNAICATLLGLFKAGDRIATDSLSFSGIKSIAKM
IGIQLVPIPQENNEISIEYLESYCKNENIKGIYLIPDYHNPTTHTMSDLSRKKIAKIAKQYNIIIIEDAI
NSIFRDGIQTPIFSLASDNTIYIFSTSKFLCAGLRVAFVVAPKRYIENLENALYNMNLMVSPFTAEIVHR
LLYSPIIDKIIEEKRDAIIERNEVADKVLSDYNLIGDKNCSFRWLLLPDELDGKSFEISAKNLGVQVYCA
ERFSVGNSTVPKAVRICVTAPKDVEELEKGLNIIKSLLKS
>gi|260687507|ref|YP_003218641.1| putative amino acid recemase [Clostridium difficile R20291]
MKTIGLIGGMSWESTITYYQVINTVIKERLGGLHSSKCILYSVDFQEIEECQSSGNWEKSAKILADAAIK
LQEAGADFIVICTNTMHKVSDKIQESIHIPLLHIADVTATVLREKEIKKVALLGTKYTMEQDFYKNVIIN
NGIEVLIPNEEDRIIVNDTIFNELCLGIISESSKKAFLSIIDKLGKQGAEGVILGCTEIGLLIKQNDTSI
PLFDTTVIHAIEAALSSI
>gi|260687508|ref|YP_003218642.1| hypothetical protein CDR20291_2155 [Clostridium difficile R20291]
MIFVKNKKYRKIAIIISIPILLVAQYYLFKFGILRPMVKGVEIEIVDGEYVKDIDKYVVKLNETVTLSTG
EYIKVPSYAKNPNIWFNVLDNSGTLKIDGNKMTALKVGYSSVGIMKNSRVLKKATIKVVDPEVESLDMEI
NGDLKHVGDSATIESTIEVDYDKFKKSYKPVYKSSNENILKIKGNKVSAVGVGKATIYAKCGNKEIERTF
RIQARVAEINMDDIKIEVDQNEKLKPDIITSPPGLEPPKIYYELVDSKLPVERAISLSSNGNVVGLREGK
DRVRITCGDKSKVITVTVVKETITNDYIQNLVGSHKIVNNKVIIKLEWDYMKDVFDYDIYLKDKLSGESF
KKIKSITINESDLGKSNKVYATIEVDMKGNQNIDFDIYVIGKKDSDTTKPSNVINITNGNGNSNNDNNIK
DMRVENISANVDRDNNVIRVNWSSISHKDCTYSIYVKNNTNGDGEFNLYQSDIQGNEHTISIPEGDLNLD
IYVVANYNGNSSQNSDVINVR
>gi|260687509|ref|YP_003218643.1| putative PTS system, EIIc component [Clostridium difficile R20291]
MEINYKKRNFKSFAKRKNIEISVQRYLIDALSYMALGLFSSLLIGTIFNTLGDNFNISLFTEVISPLAKQ
VTGPAIAVAIAYGLQAPPLVLFSCALVGACGNELGGPVGAFVATLFAVEVGKLVSKETKIDILVTPAVTI
LIGVLVAELIGPAVSAFMTSFGNIIMQATTMQPIIMGALVSALVGIALTLPISSAAICMMLSLGGLAGGA
ATVGCCCQMVGFAVMSFRENRVGGLVAQGLGTSMLQVPNIIKNWKIWIPPTVASILLGPLSTTIFKMENI
PIGSGMGTCGLVGQFGTVTAMQSAGKGGISMWVGILLLNFILPAIVTLLISEFMRKKGLIKPEDLKLDV
>gi|260687510|ref|YP_003218644.1| hypothetical protein CDR20291_2157 [Clostridium difficile R20291]
MTGKIEEIKDKINRFCNSNLNQEYKDISFKILQNLLDNNKEIIHSSRADIWSSAILNIVLEQNLLYNKKH
PLHITKKEFSKQIGVSLNTINNKSSLIKDVCSIDFLNQDTIAISNVEFWVKETNSKSKSVDLDLEKKKIL
YKRYIKLSQDANSDIESIRYMEEAVNIGKSMITKEDKELGFWKGLSTRAYMIALESLARKLESINNLKES
KKVLEYLIEINPSDEQGIRYKLLNVLIRLNDRTSINKLFELYKEEKSATWMYSKALYYFKNKSMFLANDS
IKVARSKNKYVGLYLLDWRNAFGREFVTEEEKAEAVYYYDENIVVWNEVKGSMDWLLKKMLEFS
>gi|260687511|ref|YP_003218645.1| hypothetical protein CDR20291_2158 [Clostridium difficile R20291]
MIRKKSELQVEVKENLNGGIGKVKLENIIQNEELKGKGRLFKRVALPVGSSIGVHDHTTDFEVYYILKGK
GKVFDNGEFVEVNEGDVVYTADGEKHSIENIGEEDLEFVALVLYM
>gi|260687512|ref|YP_003218646.1| peptidase [Clostridium difficile R20291]
MNIKDRLSGLRKFMEEKNIDAYMIPSSDNHQSEYVGDYFKSREFISGFNGSAGTVIVTKDEAGLWTDGRY
FIQAESQLEGSTIKLFKMGQEGCPTTDEYLYKNIPEGGTLGFDGRVISAREGATLAEKLSKKGIKIEYQY
DLIDGIWPDRPALSDSKAFLLDVKYCGESFSSKLARLREKMSEKGTSTHVITTLDDIAWLFNIRGGDVKY
NPVVLSYAVITLKEVYLFVDESKLNEEILDELAKENVQIKPYNDVYEFVKNIDKTEKVLLDGTKLSYTIY
NNIPCEVEKVDEFNPVMFFKAQKNEVELENIRNSHVKDGVAFTKFMYWLKKNVGKMEITEISATQKLEDL
RREQEGFFEPSFNTIAAYKEHAAMMHYSATPESNYKLEAEGLFLVDSGGQYYDGTTDITRTTVLGPISDE
LKLHFTSVARGMINLSKAKFLHGCRGYNLDILSRSCMWNMGIDYQCGTGHGIGFVLNVHEAPNGFRWRVV
PERFDSAVLEEGMVTTNEPGIYIEGSHGIRTENEIVVRKAEKNFYGQFMEFEVVTLAPIDLDGIVPELMN
KDEKDYLNWYHKLVYDKISPFLTDEEREWLKVYTRAI
>gi|260687513|ref|YP_003218647.1| putative proton-dependent oligopeptide transporter [Clostridium difficile R20291]
MSSTESVSKKSGHPKSFWLICMTILWERFSYYGLTALLVLFFTASVAQGGLGLSTQEATSMFGLFTGLIY
LTPLVGGWLADKVLGQQKCISIGALLIAIGDFVLFASSTSIAMVWVGLSIIILGNGFFKSSCSNIVGDIY
PKTDVSRKDAAYSLFYMAVNVGAFIAPIICGLLSDNVFAVRGASGDIVSYGYKMAFLICGIGMMLGMIIF
TLLAPKLLNEVGKYPVTKGNKGEKIEYGPLTKLEKNRIIAMVILFLFVVLFWTAYYQTQSSFMIYVRDNV
NRTLFGFEMPVAWLTSLNAILCVALCPVLATLWVKLSHTKRGDFSIPVKMGLGMIIMGVGFIVMVFATLA
NGPDGMVKASILFIVLTYIFTTVGELFLSPIGLAMFNKLAPAKYATLSMGAWYLTSFFASLLSGKIAGFT
ATLGFLQIFGGIATVLIIFGLILLGIRNVLTRLMAMDLLTKEK
>gi|260687514|ref|YP_003218648.1| putative protein export chaperone [Clostridium difficile R20291]
MSEEKNPKENTLDEPKNSDNVNSKKDDVSDEKNTDNKVKKREIKLNNKTLKAIVAIVAVGAICLGGGYVF
GKEAGRKLPATSKHYNSSEVVATIGDKKITGEMLRKRMEPLFYLNAKTTMTDDEIRSYESNMIETMITSD
ILSSEAAKEKISITNDQLDAQYNNLMSSIESAMGMTKEEFLKQFDLTEKYIKDDMKKELVASKYLNEKSK
VTDKEAENYYNKNKSNYLQVRASHILIKTVDDKGKQVSSSKKAELKKEAEEILKKAQAGEDFATLAKKYS
EDSSAESGGDLGFFGKGQMVESFEKAAFALKKGEVSNKLVESDYGYHIIKKTDEKYQPFEEVKSDLVSSL
TSEKQNLLIQNLKEKYNVKITDKYQMKAKE
>gi|260687515|ref|YP_003218649.1| hypothetical protein CDR20291_2163 [Clostridium difficile R20291]
MLKKWFGIVKKRQKSESVKEEGEVILKNEKILSEEKLIDEEGVVVNIDNEILTKVEVVNDDNEIEEKIIE
EDWLISENTIKLDDKEAIINDKNIELCKKEVQVESEKIGLNKFEGLDQNENYNLEKNVIEEKKVSECLTE
EDLEYIKEIKIKRGKSIKAINLYTKEEWVFDTHIQCSKKLKVPLGYIRENLKYGYMDYFGDAINYLSEVL
NIDEYCKGEWSYLDNSKSPSEIFNILNNKIFSIRLSNEKRNEILTNDKIEALKMNYRFECIDEEYDEYFK
KYKSIIKRGGKKKVELVNKKGDILEIFKSLEECAIYLQKEKNEVIQMLKYGDTKVGRNFIRYSLRSI
>gi|260687516|ref|YP_003218650.1| hypothetical protein CDR20291_2164 [Clostridium difficile R20291]
MNKLLKPITILLYIVYILSAVFFVANKEYGSLGLVAISLVGTFILSFINKQTERLLSKELYIMLALFIMF
SSLLGTCFNFYDINYYDDFLHLWSGIISCIVAFSIIKYFYTQREISKMSKVFLVIFLFMFSMGVASLWEI
GEFLMDTFVGTTTQAGGLEDTMIDMVDALIGTIITIPYYSKKI
>gi|260687517|ref|YP_003218651.1| putative oxidoreductase [Clostridium difficile R20291]
MNESYWFLNSSPKEYNKLGENIKTDCLIVGGGITGLTTAYLLAKEGKKVVLVEADKIGYGTSGRNTGKVT
CQHDIFYSKIEKKYGLDKAKSYYNANNEALNLVEQIIEENNIKCDFKRETSFVFTEKEDTIKNIKDEYRT
CKKIGINCEYHETIENIPLDIKGAISFTNQGQFNPKKYIDGLAKAAVNLGLKIYENTPVVDLEKGKICRV
KTREDNIIEAENVIISSHSPWYDGLNFYFAKEYAERAYLMVAVLENKLADGMFISIDDPSITFRQYNNGS
ENLLIFGGGDHKVGQGGTEKEIFDDLEHYGKEVFKVKDFKGKWSAQDNMSFDNVPYIGYINKREDNIYVA
TGFSKWGITNGTAAGIIIKDLIINNNSDYKDTFNPSRLGSYFSKDFIKENANVAINYVSGKLKIGSGDMP
KNNGEGKIVNIDGKRYGVYKDDNGDFYIVDTTCTHLGCELNFNSEEKTWDCPCHGSRFDYKGNILEGPAL
KPLKLYGHGDNDVNPKLL
>gi|260687518|ref|YP_003218652.1| putative membrane-associated caaX amino terminal protease [Clostridium difficile R20291]
MLNLQSKWVNFLKPTYVSDEIKRKKLQVIIFFSITYGLSYSLGLLAICFNHLIDSEILAQFMMILPLSSV
SIAKFYTEGRNNDKYNFYSSVILFFIIYFFIFIIESLKLISINQFQLMYFMLILISSLCVIIYSYKITSL
YIFKNFKIGILLVFYFLFSQIIFGLIISDNQFDYKNFLNYILLPIISLVYIYPFLCEEYGWRSFLQSILF
DRFGKKIGIVMVGTCWSLWHLPLQFTLYSPQTPIIGAIAHLIYGIGLSIFLGYVYMKTKNIWFCSIMHVL
INSLGLIFNDSEIIINYHSIIQRLIFILLFYTPFLFTKEYK
>gi|260687519|ref|YP_003218653.1| PTS system, IIbc component [Clostridium difficile R20291]
MKIIDLLDEKSIKLNLNSKTKSEAIEELVDLVANSGNLNDKENYKKAILAREEMSTTGIGEGVAIPHAKN
SSVTKACIAAAVSKEGIDYESFDGSLSNLFFMIAAPDGANNTHLEVLSRLSTILMDEDFRNKLINSSSEK
EFKEIIDKKEREKFSEEYQDEKVAEKNIIDTKENDANKYPKVLAVTACPTGIAHTFMAAESLNKMAENKG
VSIKVETNGSAGVKNKLTKDEIENATCIIVAADKNVEMARFNGKKVIKTKVADGIHKAEELIDKAVNGDA
PIYHGGDGSHNESNEESESGFRKVYKHLMNGVSNMLPFVIGGGILIAIAFLLDDYTINPSNFGSNTPIAA
FFKGIGDKAFGFMLPVLAGYIAYSISDRPAFVVGFVGGALAGDGGSGFLGALLAGFIAGYLVEGLKKIFS
VLPASLEGIKPVLLYPLLGTLLMGIIMTFLVIPPVTAINNAMVGFLNGLGGTSKIVLGLVLGGMMAVDMG
GPVNKAAYVFGVASLESGQFEIMAAVMAGGMVPPLAIALATTFFKNRFTKEERDSGKVNYVMGLSFVTEG
AIPFAAGDPLHVIPACVGGSAVAGALSMLFNAALRAPHGGVFVIPVVTHPFAYILAIAVGALVGMMLLAL
LKKPLNQEV
>gi|260687520|ref|YP_003218654.1| putative 1-phosphofructokinase [Clostridium difficile R20291]
MIYTVTLNPSIDYIVKLDELKTGSTNRVKEEYVYPGGKGINVSRILKELGNDNTSLGFISGFTGEYIIRT
LEEKELKTDFIKIKSGFSRINVKIKALKETEINGQGPNIDDEDIDTLYKKLDKLNQDDILILAGSIPSTL
DEKLYENIMARLEKKNIKVVVDATKNLLLNVLKYKPFLIKPNNDELEELFGVKLNSIEDMVKYAKRLKEM
GAINVLVSMGKDGALLITEEDEVLISDVPKGKVKNSVGAGDSMVAGFISGYLNTGKYDYALKLGAASGSA
TAFSYDLAKREYIDKLVNEISVKQF
>gi|260687521|ref|YP_003218655.1| putative transcriptional antiterminator [Clostridium difficile R20291]
MSLNITARQINIIKILLNSKDTISGIALSQEIGCSSKTIQNEIKDINKQLRNGKILSIRGVGYKLEGSFD
EVNLNSNLYDDVDRVEYIIRKILTLSNEEKNTIKLEDLADSMYVSVSTVKNDLKEVKRILEKYSISVKSK
HKQGICVLESEDKILNCIVDLSNKRDNQLSLNDFLNDDIKERKLLIKKLLLDILNENGLVLTDIEFKSVL
NNILVMLSRHKYNEKEFIENYIENYRSKRSSILENEQNKEIIINSIKTFCKNLKLATSIDISNDKVFEEF
LYKHISSLCKKIKLGINQSPIMAQDIKIKYPFAFELANIAKKTIEKDLKIEINEDEVANIALHIGGAVER
ASYNNKDKVFKTIIVCTSGIGTSMLIKAKLENIFKEKLEILKIIPSYLVEYIKVIDVDFVISTVPIEVGD
VPVINISPILSEKEIRLIEKYIETGNIYLDLDIKSLFDSELFFTDLVFKRKEEVIDFMASKLVQKGYIDE
DMKKSYFEREKIATTEIGNMVTIPHGAIGKIFDNKIAIGILKKPISWEISDVRLIIMLALDKDKILDYEV
IFSKIYKRVDSIAKVISICENSSFEKFVNLFN
>gi|260687522|ref|YP_003218656.1| hypothetical protein CDR20291_2170 [Clostridium difficile R20291]
MKNFRDLGGNKTEDGRTVKKGLFYRSAKLSNLSENDIKILKELNIKYIFDYRSDEEARKHPSTIISNIKN
IRIPAMRELEESGGSFGSIEDMIDGLFEKDGAFNMLNNSYYNLPINNPSYKKLVELIRDYSNLPILNHCT
AGKDRTGVGSAIILMILGVSRENIMKDYLKSNDFADKEIERFIEYKPKFKDIPKENLKYIFGVNEEYMKT
AFRRIDEEYISVEAYLYGEFNLNKEEIRKLRNQYLE
>gi|260687523|ref|YP_003218657.1| hypothetical protein CDR20291_2171 [Clostridium difficile R20291]
MDIQKQKNFIIKFTYVVLITSIVYIVLKFLLPLLMPFVISFIIASILRPIIRLITNNTNLNRTLISIVIL
LIFYGLCIFLLVSFGVKIFASVSDVFFRLPEIYKSSIQPTLNTLFSKIDASTPNVNLSLILGWDNISQSM
MSLVASISTNALNAIASIASKTPAFMLKLIITLIASFFFTFDYQKIVNFILKQFPEKSQFMIINIKNSSI
NALLKLLKAYAILLSVTFLELLIGLTILKVENAFTISVIIALVDILPVLGTGSILTPWMIISLINGNINL
AIGLLILYIIITVVRQILEPKVVGHQIGLYPLITLMCMFIGAQLFGIAGLFGFPIAATIIKNLHDNGIIT
AFK
>gi|260687524|ref|YP_003218658.1| hypothetical protein CDR20291_2172 [Clostridium difficile R20291]
MDLSGIFKYYCKECENTWNNSSVELFEDIETYSKDSQKKREKELDKFINTISVHLERYPSDAVLRKMWVK
KGEVFLQKTLEKENIFKLEKMDVEDRKKFLDITKQFIRDARKFDDDLPIGDIMQAMRNVWISNALQLLFG
KEIYYSKANFAYSMLYPYTDNYLDNTNIDKNDKILFNNWLEKRLLGEHIKSKDYHESKVSQMIDYIESVY
PREKFTQVYESLLLIFKSQVNSLKQHGKENHLCKEDLLSISIEKGGSSVLVDGYLISGFMTKEEIEFCIG
YGFLLQISDDLQDIKEDLKYNHKTIITEMSKEGTLDKVVNKLINFTIELIDSFKINNKNKSVITMIKNDC
LMLILFSVVYNAEFFSVGYIKEVEKFIPYTIDYSLEIEEKIKEKFKNIDVLNNENEYKEMIDIICAE
>gi|260687525|ref|YP_003218659.1| putative DNA topoisomerase [Clostridium difficile R20291]
MGKILVLAEKPSVGRDIAKVLGSKNEKNGYIEGPKYVITWALGHLVTLADPESYGERYKSWSLEDLPILP
KHLKTVVIKKSGKQFNTVKSQMNRNDIDEIVIATDAGREGELVARWIIEKSQVKKPIKRLWISSSTDKAI
KDGFAKLRSGKEYENLYYSAIARAEADWIIGINATRALTTKYNAQLSCGRVQTPTLAMLLKREEEIRNFK
PKEYYGLELIATKGNSDIKFIWNDKNNNSSTFSKEKIESILKKVKGVDIKISEVNKSYKKKYSPALYDLT
ELQRDANKMFGFSAKETLSIMQKLYEHHKVLTYPRTDSRYLTSDIVGTLKDRIKAVNISDYSKICNKLLK
SNIIANKSFVDNSKVTDHHAIIPTEQKVFMSDFSDKERKIYNLVVKRFLAVLSPPFEYEQTTISATVEGE
IFKAKGNKVINLGWKESYKDIEDEDEYESIPNVLEKDVLKVKGLKITSGKTNPPPYLNEGTLLTAMEKNG
LGTVATRADIIEKLFNSFLMEKKNKEIYITSKGRQLLDLVPVDLKTPELTASWEKKLLDISKGKLSKNTF
INDMKDYSKDIVLEVKNSDNKFKHDNLTKNRCPECGKFMLEVNGKKGKMLICEDRECNTRKTISQVTNSR
CPNCHKKLELRGEGEGRIFTCSCGYREKLSSFNKRKQEEKQKASKKDVNQYLKNQNKNQETFNNPFAEAL
AKLKNK
>gi|260687526|ref|YP_003218660.1| putative sodium:solute symporter [Clostridium difficile R20291]
MNLIDILNKVDAFIWGPPLLVLLVGTGILLTVKLGVVQITKLPRALKLIFSAENKGSGDVSSFAALCTAL
AATVGTGNIVGVATAIKAGGPGALFWMWIAAFFGMATKYSEGVLAIKYRTKDKNGQVSGGPMYYIVNGMG
EKWRPLAIFFAISGILVALLGIGTFTQVNSITDAINNSFGIDPRITGVVLAVFVALVVFGGLRSISNVAT
KIVPFMAVIYVVICGIILISFWNKIPETFMLIIKSAFTPTAATGGFLGATMSLAIRNGIARGVFSNESGL
GSAPIAAAAAKTEWPAEQGLISMTGTFIDTIIICTLTGFSLVISGVWCSDLNGAVMTQAAFNGAIPTFGP
ILLTVSLTLFAFTTILGWSYYGERCFEFLFGVKGMNGYRTVFVAMVLLGAFLKLEVVWIIADIVNGLMAI
PNLIALLALSPIIVSETKKYFEHINSPENQIKKNA
>gi|260687527|ref|YP_003218661.1| sugar phosphate aldolase [Clostridium difficile R20291]
MLDSLKGKVVEIAIKAEHYGLCKEKTGNFSIRDKDTGYILITPSGIGREELNVEHICVLDLNGNVIEVEK
GIKPSSEVLMHIEIYKIRENINAISHTHSLYATAFSVAKKPIIPIVYESVNYGGYVDIAPYERPGTLKLA
KSVSKLLIDTDACLLERHGLTTVGNDLDEALLKSRYVEEVAEIYYRSLVLNQFKELEVVDVDEFESWKYP
EEIKF
>gi|260687528|ref|YP_003218662.1| L-ribulose-5-phosphate 4-epimerase [Clostridium difficile R20291]
MLEILKEEVLKANLELPKKKLITYTWGNVSGIDREKGLVVIKPSGVEYSNMTVEDMVVVDLEGNVVDGKL
RPSSDTPTHLVLYKEFEELGGIVHTHSSWATIWAQIGKSIPSCGTTHADYFYGSIPCTRKMTREEICNEY
EKETGNVIIEEFMGRNPIHCPGIIVNDHGPFTWGKDANEAVHNAVVLEEVAKMAYYTELMSPDNIMDKVL
MNKHFSRKHGKNAYYGQK
>gi|260687529|ref|YP_003218663.1| putative sugar dehydrogenase [Clostridium difficile R20291]
MKGDIYMGDKMRASVLYNVGDVRYEMVDIPEITDTQVLVNVKYVGICGSDLPRSMVSGLSGNTKYPLILG
HEFSGEVVKIGEKVKHINVGDRVAVAPLVPCGKCDYCNEGNFGLCDDYNIIGTRVNGAFAEYVRVPEEHI
LKLPDTLDYETAAGIEPATIAYHGISKSNIRVGDSVVVLGCGPIGQFVIQWAKVFGASKIIAVDIFDEKL
ELSKLLGANYILNSKEVNVIKEIKKITNGGADVVIETAGSRFTQEQSLFVAKKRGNIVFVGISHTELPLS
ADATECILRGELTLKGSWNSYASPYPGRAWTATLDFMGKGDIIFKPMISHKIGLNEVGDFLSKMSKREIN
FNKILVEI
>gi|260687530|ref|YP_003218664.1| PTS system, IIc component [Clostridium difficile R20291]
MLEFMKSIIDTFGSAIIVPIIIFIIAKIFKVTTKKSFLSAVYAGVALQGFTLILNSFTPIITPVINRMVE
STGVNLPVFDVGWQATSLVAFSTSAGMIYLGLGILLQTILFLIKWTDVFQPSDLWNNYSYMVWGAMVIGV
TGNFPLGIACMVLLNLYSLLISELVAKRWSSYYRYPNCTIIAMHNVEASVFAVFSDPIYNKLGLNKIKLN
PKELEKKLGFLGEPITLGLFLGMFIGILGNMTRINTMEAWGEIMKVGISTSAVMAIFPKVASMFAQAFAP
ITEAARKIMQKAGNREWYIAVNDAVGYGEPATLISGLILIPIMLVISMVLPGNKVLPVVDLLAIPYMVQG
LVAIHNGNIPKVLVSGIIWFGLGLYVCTSTAPLFTDMATNIGVAIPAGAMLITSFNILGKPLMGLVFFAF
LSANPIYIGLSVVIYFVLWALFRKNKTSILDYLEKQALKNVEEEPVAV
>gi|260687531|ref|YP_003218665.1| PTS system, IIb component [Clostridium difficile R20291]
MKQFNVLSVCGSGTVTSSMVAGKLKEVLGNKGISITTTEARPTEALNLAQSGRFDFITFTSPLQTGDYGI
PTINAFACLTGIGEEAFFEEVLTVIEGIDK
>gi|260687532|ref|YP_003218666.1| PTS system, IIbc component [Clostridium difficile R20291]
MNVDLISLGLESNDYESVIEELGSIMCKKEYVKETYINAVLERERTLPTGLDIGEMCVAIPHTDSKHVNE
SNVAVGILKNPVKFNSMIDPKDRLDVELVFLLAVKNPDSQVKLLKDLMSVFQNIKLLKNIKNASTKEEVA
KLLDFIEI
>gi|260687533|ref|YP_003218667.1| putative sigma-54 interacting transcription antiterminator [Clostridium difficile R20291]
MELRDKLVNIINTENKKDPLTDVQIAKFLSTTRENITNLRKELNISNSRQRRYPYLKSAISAILQKNKNI
SISEITRELMTEGFNISRRVVEELLPKESLEMDVVEESEEESNDPFETLIGNKGSLRNAVEQAKSAILYP
PKGLPTLIIGESGVGKSLFSRHMYEFAKQKKIVKESSNFVVFNCADYSDNPQLLLSLLFGYKKGAFTGAE
YDTPGLVEEADEGVLFLDEIHRLPPKGQEILFSILDRGKFRRLGETNAERKVSIMLIGATTENVETNLLL
TFRRRIPMLITLPPLHDRLLKEKIDLIYNIFQQECNRINAKIFVDKNVIEILVLKKFSGNIGQLQNMIQV
LCARAFMKFINSKDEDSESIVVVDINEVLKLKDSFKDAAFQEIEYTEIRKYLKNAIFIPFNLEESSVKGS
LLSDEYILPEDIYKTIEKKYYDLKSLDIEDIDIENILWTFILNRFADLKFNLDSNEEIFSMSDLNSFVSD
SLVKLVKELMNDIVEKNMNLEVNKNMFKYLAIHLEEAIKRIKLNQKIINVNLEKIKIDFSKEYEISKSFA
IKIEESISIKIPDDEIGFITLYIKSALKNEVKKDKVGLIIISHGRIATETVNVVKELLGVKFPVAIDMPL
DEKPINIYNKAVELSKIIDQGKGILFLVDIGSLTNIGQIVNKRTNISTKTIDRVDLLMALEATRKVSMGE
EELDEIFFSLLKDRMGYNYELEKHIDKSNAIVTLCLTGEGTAKYISKTLEEKYDNTKCYQMSALDENLFC
KIENLKETNNILAIVGTINPKIPGINFIPYNKELFKNLDIYLSKSKQQDDRPVKSYERMLDEDLVIFEPD
IYFKKDLLEYVCSILINKEYVEKDYLDSVLHREEMLPTYSKGAIGVPHGDSSTVNSTRFVFVKLKNPIDW
GVGNVNFIFMPVFQANDKEIVKNVLEILKDAEFMNNANKCFDKDAFRRIIFDKFKHL
>gi|260687534|ref|YP_003218668.1| hypothetical protein CDR20291_2182 [Clostridium difficile R20291]
MNTFKTEVLLKYSAKDIFNIFTKSARLNFPNFNEKKAVGTFVQQKNNKRFKVEITNFEKNRVYEIKTSNK
RESTITRYELVHIDLENTKLIFIESESKRNIFGKINSALVRVLFGKRQPEEFNKFIKKLEMELENNSVNL
>gi|260687535|ref|YP_003218669.1| putative beta-lactamase inducer [Clostridium difficile R20291]
MELFIEVIKFNIYISLLILFFILFTKKISKYTFKFNYFICLLIVVRMMFISKINLNILNINNTTINIYKH
NLDNYIPYDQGITLDIFMYIWILGIIAISFYYLRTNFKFYNYIENFKKEILEIDITSILDEQAKELSINK
KLQIYKVKGIYSPAIIGLTRCKIIIPEKKYNNKELRFIFKHELIHYKRKDNLFKLLISIICIIHWFNPIL
YLLKKYFHELCELSCDEIVIDKCTTSEIKEYAYIILNTIKYQKTLKYSSFVSQFLNKKNIILKKRLNSMF
NQDKKKINLGLKFLLTFIIIGSIFSINSNFKQNEDVEYTIAKINYNKNGETYGTHIIDSNGNSIEPELIQ
TIGRGKKVGYVKKRDLYDCDNQPKTPEEAVLYTRKRNFNIFKKTIPLYDKEGIKIIGRFEIN
>gi|260687536|ref|YP_003218670.1| GntR-family transcriptional regulator [Clostridium difficile R20291]
MPINSFENYPMNWKPKRPSKGQILYKALAEQLEQDINNGFLLPGTKLPPQRELADFLDVNVSTISRAFKI
CEKKGLISGVTGSGTFVSYDTRSNLFLMSSNNKITFIEMGTMNPDFTLEEMNTLFKHIIKEIDFKTIFQY
GQRDGAKWQKEAIAKLIYKAGLETTSDSLLPASGGQNAIVAILAGLFQHGDRIGVDPLTYPGIKTAAKML
GIQLIPIKQEDNEISEEGLLYACKNENIKGLYIIPDYQNPTTHIMSQNGRKMIANIASKYNLIVIEDAIH
SLLNETHLNPVASYLPNQTIYITSLSKIIAPSLRLAYISTPKQYREALSSALYNINLSQSYFLTEIAYRM
ITSGEADKLINARRKSARRRNKIINQYLSGYNLLGNEECIFRWLILPDGIMAEKFEIQALKEGVQVYASE
RFAVGKEKPISAIRIAVCATESTEELKAGLSVLKRLLEEKK
>gi|260687537|ref|YP_003218671.1| hypothetical protein CDR20291_2185 [Clostridium difficile R20291]
MERTQQLKESFIASIPIFLGYIPIGIVGGILLQKSGLSPFQIALMVTLVFGGSSQFIAASMISTGASVTS
IVLTTFIVNLRHFLMSSNLNMYIKNKSPKFILPFCHTITDETFAVNYEKFTAGNWSDRNAIYLNFFCLIS
SVLANFIGAFLGESISIDSSISGFILTSMFIALIVSQIKNKIYIVVFISSIIISVILYALFKSNLVIIVA
SILASLIGFFIEESYCKKEESYE
>gi|260687538|ref|YP_003218672.1| hypothetical protein CDR20291_2186 [Clostridium difficile R20291]
MNNNYIFFIIIGMYIVTYLPRVLPMLIFSKKEMPDFLKKIMKFIPVAILTSLTAKDVFFNGDSLYLSIAN
PKIISFMIVLLVAYKFKSIGISIITGVISIYLFGIIL
>gi|260687539|ref|YP_003218673.1| two-component sensor histidine kinase [Clostridium difficile R20291]
MGNLEKYRALKLVSLIIISISFPLTILLATIGLAEPKYNIQKTSTKSGIFNISNDFYDSNIFDEGTVESL
LSNFKISVDSQLTSEEKSKLQTKSKSIDLSSNDSEYDKIMINKQASEEYLSYLKNIKVYVINTYTGVFYT
NTSYGNLDDFKQKTKSYCNIEIINNVGKSSYIKTINGEKFELNNLSMELNGVDEAFEAYVSFPEEPTIED
GIVYTNFQIFKQATEKVRLFFVACLSLAIVCLLSIILYSRIKGEVLKRNNVFLLIYSKIPMEFNVILVFI
SIAILTMYALAVSYHIDVIVLVSLSLLIVSNNIFFINVQLSYLENKMCIFKTSIIVRVILWLIKTVREVS
NAIKKVSLARKVIVIVIISLALIMVISTRSIGMGLLFSICIFLGFTIYITKRLSYLSYVIEGTERIKKGE
LDYKIKITGNDNFTSLAENINNIGEGLDRAIEEQVKSERMKSDLITNVSHDLKTPLTSIINYVDLIKKEE
SIQPEYINDYIKVLESKSKRLKLLIEDLFEASRVSSGNIELQISKIDLVQLLRQSIGELEEKLSKNNLYL
KLNVPNDKVYIWADGRRMYRVFENLLSNIAKYSLEETRVYIDVYDYGENVKVTMKNISSYELNFDPSEIM
ERFKRADESRNTEGSGLGLAIARDLVALQGGKFYIEIDGDLFKANLEFQKYEEEITNME
>gi|260687540|ref|YP_003218674.1| two-component system response regulator [Clostridium difficile R20291]
MYNILVVDDDKEIVDSIEIYLKSEGFKIYKAYDGMKALEIITENDIHLILMDIMMPKLDGIKATVKIREE
RNIPIILISAKSEDTDKIIGLNIGADDYITKPFNLLELIARVKSNLRRYVTLGNYEDTCKEILKSGALEL
NTLTKEVKIDGENIKMTPIEYKIIELLLENKGRVFSIDEIYEKVWNEESFNSENTVAVHIRRIREKIEIN
PKEPRFLKVVWGVGYKIEKF
>gi|260687541|ref|YP_003218675.1| putative repressor () [Clostridium difficile R20291]
MYTMKISKLPEAELKVMRYIWESEKVLISREITKSMEQKYEWKDTTIFTVLKRLLKKRVFRNGENR
>gi|260687542|ref|YP_003218676.1| putative regulatory protein [Clostridium difficile R20291]
MKEEILIEKLLRAELIVMEYLCKKDTLMPKKEIVKEIKQIYGWHKSTIKILLKRLVAKRYLARYIINFQY
HYKIIIDNKEYYTFKKKVLKSSKSIKIMRSLTTTHKNVSKEKLDLLDEYYRNLKE
>gi|260687543|ref|YP_003218677.1| putative pilin protein [Clostridium difficile R20291]
MKNKKGFTLVELLVVIAIIGILAIIALPALFKNIEKAKIAKLEADISAIKSASLSYYADESKYTDGGMIS
WVKKDGKIIINGGFKDDPLADKIENLGMPYNGSYLLMSSPGHEKYLELSILPEGEISKSGLDKLKNDYGN
LIDITNDQNKINIVIKLLNNKSNT
>gi|260687544|ref|YP_003218678.1| hypothetical protein; hypothetical protein [Clostridium difficile R20291]
MTKYDFNFKLKVAKFYLNREGRDILIVKQYGVYDHSQVERWVNILGEGALKIKKFSILYGSS
>gi|260687545|ref|YP_003218679.1| putative membrane protein precursor [Clostridium difficile R20291]
MIQKKIFMGFCGFLGFLSLRYFSSGNVTDLTYIGFFAFFSNFIIAKINGDKADERYVQDEKAAMAFTGQL
AIIELFILWCITIVSRNVELMCVLLSITYAITLNVYAIKLYILEEK
>gi|260687546|ref|YP_003218680.1| putative transcriptional regulator [Clostridium difficile R20291]
MPKFICNLKKYRQLKELTQEQLAEKVGVRRETIMRLEAGKYNPSLKLAIDISKIVDTPIDELFIFD
>gi|260687547|ref|YP_003218681.1| integrase, catalytic region [Clostridium difficile R20291]
MQLCEIAKVNRSGYYKWLNRDKSNLELENIKLATLITNIYEEKKGVFCSLRMTLQLNREYKLNVNHKRVY
RLMRAVGLRSICRKKKFSYVKCTPEVIAENVLNRKFSADKTSQKWLTDVTEFKLTNGTKAYLSAILDLGD
RSIVSYVIGKSNNNNLVFETFNKAIEVYPNAKPIFHSDRGYQYTSRVFKSKLLTQGMIQSMSRVGHCIDN
APMEGFLGILKVEMYYLRKFDTYEQLVKAIDDYIYYYNNFRYQKRLNSMSPLEFRKYLSTEIA
>gi|260687548|ref|YP_003218682.1| full=transposase [Clostridium difficile R20291]
MSKTKVSSEQKIEAIESYLKGENSVIKIMEELNIGKRTFREWMRNYETFGNDGLIKQSHKSCYSKEFKLN
AIESYLNGEGSYDTISKKYKMRSVNPLKAWVKEYNLHKEIKETPKGGLFMETRKTTLDERVEIVKDCIEH
DFNYNLIAKKYFVSYSQVRRWTLKYKENGIVGLEDRRGKAKKEDELTQLDEIKLELKIVKAEKHKLQLEN
AFLKKLKNIERGW
>gi|260687549|ref|YP_003218683.1| cold shock protein [Clostridium difficile R20291]
MNNGIVKWFNNEKGFGFISMESGDDVFAHFSAIQTSGFKSLEEGQKVSFDIVKGARGPQAENITIL
>gi|260687550|ref|YP_003218684.1| ABC transporter, substrate-binding protein0 [Clostridium difficile R20291]
MFKKLSVLALAMIISLSITACNSKENKANDESNTKVTTADDSKEKETLFVYSGAGLKKPMDEIAKKFEKE
NNVKVEYSYAGSAQLIAQIETSHKGDVFIVGSEPIYSKAFEKELVGEHKTVAHHTPAIVVPKGNPANIQK
LEDLNKDGVKLILGDKESNAIGKTTQKILEKNNLKSINDNVVSTAATVNEMIVQLTSSKADATIATKDSV
FGNEDVEVIEIAQDKNIDQLISAGIVNYSDKKDLANKFINYIESDEAKQIFKKYGFEPVK
>gi|260687551|ref|YP_003218685.1| ABC transporter, permease protein [Clostridium difficile R20291]
MKNKFFTTLLTGFFAIVFFFIVSPLLMLIIKGISYVPICLKSVEVQYAITLSIKTSLISTIVCLLLAIPV
AYFLHITKLPFKKLIIQIINLPMSLPHLVSGIALLLLFGRMGIGDSIYKIFKLDFIFTKQGIVLAQVFVN
LPLTIKILHTSLNESNEKMIFVARTLGCNSWEAFRFIILPNLKTGIISATVMTWSRALGEFGAVAMIAGS
TRMKTEIIPTSIYLNMSTGDIDIAIGIAVILIFISLTCLMLFEIFFNREVDKN
>gi|260687552|ref|YP_003218686.1| ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MLKIKNLSLDLPNFKLQENSLNINNHEYFVLLGASGSGKTLFLETLAGRYPSAKGNVSYKENLISNLPPE
NRNIGFVYQNFELFPNMNVEDNIRFPLKLRKIPIDEQILKANHLSKLMQIEDIKNRYPKNLSGGEKQRVA
FARALIAEPDILLLDEPMSSLDYITKKHISKILKDVYIKYKPTVIHVTHDISEAMFFAHKIGIMNNGKIN
HIFDLNEEIKNKGESFFYEYI
>gi|260687553|ref|YP_003218687.1| hypothetical protein CDR20291_2203 [Clostridium difficile R20291]
MNIFDILRDYLLVQVDKYNLNMDMISIVSKSLSSKEAIGNTKRKDFPIIVGKEIMLEADFKGAKGQAFTS
TPSTFEGSLKDILSLDLHDNPHDRSLFIASLNAVMKYLGKTDRTIHCKNNEPEVCAKKFPEFIKMEFGNP
KVAIIGYQPAIIDNIKDFFETRVLDLNPEFVDTIQYNVKIEDGIRDYEDVISWADLVICTGSTLCNNSII
NFLSLNKPVYYYGTTIAGASNILGLKRLCFCSK
>gi|260687554|ref|YP_003218688.1| hypothetical protein CDR20291_2204 [Clostridium difficile R20291]
MTFKNKKFTINKYEILSIILVLCLILTGFSSYVNYSHKKFKDYVVFYVQHQDDEVLWAGSAIVNAIKERG
KNHVFVVLVSTGCGISVFDKYKKYENLTNIQKSEYRNREFLASLNSLGVIRENIILLPETNTNGNTDFNY
MEKIALTFEEKFKNVTHIAHTYKLDDHLQHLKNGSVIQNLYNVGKIKDAKYFVKPKFADKITFNNKIVYK
AHSTEDYEKVKNACQQYKIVDELEYREGIGYKSDHKSFDKLLNNKDVPAILHTPNL
>gi|260687555|ref|YP_003218689.1| two-component response regulator [Clostridium difficile R20291]
MNQNILVVDDDREIVDAIEFYLRPDNFNVLKAYDGLEALDILIENDIKLIIMDVMMPNLDGLKTTLKIRE
KRNIPIILLSAKSEDMDKIIGLNMGADDYITKPFNPLELTARVKSQLRRYINLGDFSNTNNSNDTNYILK
SGGLELNTDTKIVSLDGEEIKMTPLEYKILTLLMSRKGKIFSSREIYENVWNEDAYSCERTIAVHIRRIR
EKIEINPKEPKYLKVVWGIGYKIEKLNY
>gi|260687556|ref|YP_003218690.1| two-component sensor histidine kinase [Clostridium difficile R20291]
MKNLIINDSKAKFILLLLLFLLVSILFEAVYDLNNNFSYNINCYYKEFALPYFYFFGTPVHLSKVELEFV
CIGIILSSFLLTILCFTLYKKNKQTKVKFLENVISLFSKVKIELTLILTLILLTLRFHAFTSNKMFYNTN
LIIYNFIIISIVYIIYENIKYNNYNLKDMSITYVFFSNLLSMYNKKTINKKLAIVFLISIVVQAIIQYLV
LIFFMYIYYSEAIAIVILFTLVNTVFHFYIYNFLSVKFNYINNISKNIKNIENGNLKYKLEVIGDDEIST
LAKSINNITGGLETAVDANIKNERMKAELITNVSHDLKTPLTSILSYVDMLKNNDFDRETINDYINILDK
KSQRLKLLIDDIFEASKLSSGDVEFNITKTDIRELLIQSIVEFEDKIQNSSLDFIIETPEYAVFTMIDGK
KTWRVFENLICNILKYSMPNTRVYIDMFIKEENIILTFKNISNDKLNLKPEELIERFRRGDISRKTDGSG
LGLSIAQNIIELENAHMEIIIDADLFKVMLTFRRVN
>gi|260687557|ref|YP_003218691.1| putative phosphoglucomutase [Clostridium difficile R20291]
MGDLYKLQNGTDIRGIAYENDSKEVNLTVEEVKKIAKAFHIWLKEKTKKDKVTVAIGTDSRITGSQFRST
VIETLTNDDCNVIDCEIATTPAMFMTTIMDGYNSDGAIMITASHLPYYYNGLKFFTESGGLEKTNIKEML
DIAVKNDSVDYEEVNKKGEVIVKNLIEDYSNLLIDKIRKGVNSSKNYEKPFSGLKILVDAGNGAGGFFAE
KVLHILGADTTGSQFLNPDGMFPNHIPNPENKEAMESICKAVLDNNSNLGIIFDTDVDRAAIVGKNGKPI
NKNALIAVISSIVLEEHPKTAIVTDSITSEGLAKFINELQGRHHRFKRGYKNVINEAIRLNSEGEECHLA
IETSGHAALKENYFLDDGAYLIAKILIKVAKLSLEGKTIEELIENLEEAQEEKEVRIGINKEDFRPYAED
ILKDLDSHVKSIDGWSVAPNNFEGIRVNCDESNGDGWFLLRISLHEPLLALNIESNKIGGAEQIYSKLKL
FLEKYDLKGL
>gi|260687558|ref|YP_003218692.1| putative ribulose-phosphate 3-epimerase [Clostridium difficile R20291]
MSIICASIMCADQMKLKEELEALEEAGVKLLHCDVMDGIFVKNLAMGPELLKSISENTTIPLDIHLATET
PDKYIDMMSYIKPKYISFHVESSTNVKADIQKLRNYGIGPVLAISPQTSVDKIEEYISLVEGILVMTVNP
GFAGQKFNLSVLDKLDKLTEILKDYDNPPFIEVDGNINKDTIKLMNGKKVDIYVVGTSALFNDKPPISYK
DKIEELKESIK
>gi|260687559|ref|YP_003218693.1| ribose-5-phosphate isomerase 1 [Clostridium difficile R20291]
MKISIGCDHGGYELKEYIKENLINKGIEVEDVGTNSKESVDFPIYAKKVSQNVQSKKSDLGILCCGTGIG
MSIAANKFKGIRAAVVSDCFSAKATREHNNTNVLCLGERVIGKGLAMRIVEEWLNSSYNGERHARRLQMI
DDIEKENL
>gi|260687560|ref|YP_003218694.1| transketolase [Clostridium difficile R20291]
MGIATREAYGQVLKELAENKDIVVLDADLGKATKSISFKEVAPDRFFDMGIAEGDMIGTAAGLATCGKIP
FASTFAIFAAGRGYEQIRNSVAYPNLNVKIAATHAGVTVGEDGGSHQAIEDISLMRGIPNMVVLNPADAL
EARQAILASIDYNGPVYIRLGRAATPDVNSENYKFEIGKGTVLREGSDITVIATGIMVAKALEAAEELAK
EGINVEVVNISTIKPLDEALIKETAKKTGKVVTAEEHSIIGGLGSAVCEALAETKDVVVRRIGVKDVFGQ
SGTPADLLKHYGLTTEDIVKNIKELL
>gi|260687561|ref|YP_003218695.1| transketolase [Clostridium difficile R20291]
MSTLRDHSNNIRKNIIKMVAEAKSGHPGGSLSIADMLTVLYFDKMNVCAENPKMADRDRFVLSKGHAAPA
LYATLAEKGFFPEEELITLRKFGSKLQGHPDMKKVAGIDMSTGSLGQGLSAANGMALAGKLDNKDYTVYT
ILGDGEIQEGQIWEAAMTASHYKLDNLIAFVDLNGLQIDGSNEEVMNVNPVDDKFKSFGWNVIVINGHSF
EEIGNAVDEAKKVTGKPTVIIAKTVKGKGVSFMENNAAWHGTAPNAEQAEQALKDLEGGL
>gi|260687562|ref|YP_003218696.1| putative carbohydrate dehydrogenase [Clostridium difficile R20291]
MKAVVKTKPGYDNVEVLEVEEPKATGDKVKIKVEYSGICGSDIHSFKGEYANIKAPVTLGHEFSGIVVEV
GEDVKDIKVGDRVTSETTFATCEKCIYCETKDYNLCPTRKGIGTQVNGSFAEYVLSREESIHVLPENVSL
LSAALTEPLACCVHAALEKTTIESSDTVLIIGPGPIGLLLAQVVKSQGATVIMSGVTKDKERLEIAKNLG
VDRTVNVMEESLADVVNEMTDGNGVNKGFDCSGFMPAVNEALRLLRKKGTFVQVGIFAKKLNEMDQEAII
QRELQYIGSRSQKPSSWITALDLMASGKVNTEALVTRTVGLDEFKEGITALMNGEEIKVAVKS
>gi|260687563|ref|YP_003218697.1| putative galactitol-1-phosphate 5-dehydrogenase [Clostridium difficile R20291]
MKAAVLHGTNDMRFEDIEIKPCESDEVKIKVMAAGICGSDPPRVLKHWKYPVPAIPGHEFSGVIAEVGKD
VKNVKVGDRVVAIPFIPCNECEYCKRGLFSLCDDHGMLGAKSFGAFAEYVNIKATNVLPIGDMDFEDAAM
IEPLAVAMHGVLNIGVQVGDAVAVMGSGTMGQLVIQGLKIAGAGTIIAVDISDNKLRESKELGADIIINA
KDIDPVEKIKELTGGKGVDIALECAGSKITQEQCLLITKKKSKIGFLGIAYSDITLSEEAFENIFRKELE
LKGFWNSYSAPFPGQEWTKGINLVNEGKIKLKEMVSHRFSLEDTYKAFEMIRDRKEEFNKILILPQGVEK
>gi|260687564|ref|YP_003218698.1| PTS system, galactitol-specific IIc component [Clostridium difficile R20291]
MDKLLAVVQYILNMGPTVILPITIVVLGMIFRIKFTKALKSGLTIGIGFVGINLVVNLLTSTLGPAAQGM
VERFGLNLTVIDVGWPTTASATWASPVAPILIPVCLLVNLLLLYFNKTKILNVDIWNYWHFIVAGAVGYI
VTGSYVWAIFCAILMELLVLFIAEKTAKNVQEFYDLEGIALPTGSTASFAPLGYLVGKFVEKIPGINKIQ
ADPDSIQKRFGIFGEPMMMGIILGIILGALAGYDVAGIFNVGISMGAVMLLMPRMVRILMEGLIPISESI
RDFLQAKYGDRELYIGLDAAVATGHPAVISTALILVPITLFLAVILPGNKVLPFGDLATIPFYMAFIVCF
RKGNIVQSVITGTIVIAISLYMATNFADVHTQLLQQANMMPEGTTMVTSIDTGGNLLKWGILKLSQLVSS
FGIF
>gi|260687565|ref|YP_003218699.1| PTS system, galactitol-specific IIb component [Clostridium difficile R20291]
MKKILVACGAGIATSTVVCDKVERLVKENNIQAEVIQCKIAECATKQEGADLIVSTTILPTTYNIPAIKA
TAYITGVNTAALDKKILDALK
>gi|260687566|ref|YP_003218700.1| PTS system, galactitol-specific IIa component [Clostridium difficile R20291]
MEFINFVSDKVIDLKMDCKTKEDFFKEIHNKVFDLGFVKEEFGEKILARENVFPTGLNLGDYGVAIPHTD
AEYIKEQFISVCTFNEPVVFSSMEDQDEKVPVNLAFILGLNQPHSQLSVLTELMGIMQNKELVDKLMSST
DKEEVLRTLKSL
>gi|260687567|ref|YP_003218701.1| putative sigma-54 interacting transcription antiterminator [Clostridium difficile R20291]
MDKILREIQREDKKNPYTDQELAEMLNVARSEVISVRKKNNILDSRERRKKILIKDISKIVSENPQMSER
KITEILIENGYNISRSAVSKLLKEENLNQSKIGIKDKDPASSGKYVKVSKVVEEDGFEELIGIKGSLKEK
VNLAKSAIMYPPNGLHTIIYGETGVGKSELATCMYKYAIKNNIKEENSPFIVFNCADYAENPNLLIAQLF
GVVKGAYTGADANREGLVEQANNGILFLDEIHRLPAAGQEILFSLIDRGEFRRLGESSSNRKANVLIISA
TTENPDSNLLQTFRRRIPMVINLPNMSERPKSERYEIIIKFFEREAKRVNKNFIITKEVMCALMNYKCTG
NIGQLKSDIQVTCARAFSKSIFSSDKVIIDLDSLRDYIKSGYYDCNCKNEKYSEFSVEDIYIDISELVSG
KNRILSDNEISEIYNYAEKELKVLESKCFSEEELKNAFIEKLDKKFNAIKNNKNLSDRRSRIDWGGQLKE
STLEIMDKVIVFIKEQFKHVNQGLYLALAIHIEHAIGRIKDGKTIINPSLDKIKASMPMEYELSRYIMGI
VEDLTQVTFPEDELGYLAYYINKFCYNEESIKDKVKVVIVTHGKVGIEMSKVVNHILGIECTLGIEIALT
DSPSEGIEHVLEELQKIEARKGILVLIDMGSLVILGDEVEKRLGIRCKTVNRVDTLLAMEAGKLATIEGK
SLDGIIADLKKNKNYAMINTNKFSYRKNEYGKKNVIITLCLSGVGTALNLKEHIEKQIKEYGTLIEVKPV
AFLNNNLEEELNDIEAEYNIIAICGTIDIDYKNVPFISYNEVLGKNGINKVLEHLNSKQPALNIENQLNN
LIHEDLILYNFEGISKEYIIDTLVSKLEEGGYVDSKYILSVYKREAMGSVVMASKVAVPHGLPENVIKPA
IAIARLNKPIVWDNKFMVDLVVLLALKENNKKEIRSLFSKINDQHTLEVLLNTEDKNEIKELLS
>gi|260687568|ref|YP_003218702.1| putative transaldolase [Clostridium difficile R20291]
MRFFIDTANIEEIKEANDLGVICGVTTNPSLIAKEGRDFIEVVKEISEIVDGPISAEVISLEHKGMIEEA
EKLSKIHKNIVIKIPMTAEGLKAVKVLSSKGIKTNVTLIFSAGQALLAARAGATYVSPFVGRLDDISQNG
LDLIEEIVDIFSVNSIEAQIIVASVRNPIHVLQAARMGADIATVPLKVINQMIKHPLTDKGIDSFMKDWE
GAFLKL
>gi|260687569|ref|YP_003218703.1| xanthine phosphoribosyltransferase [Clostridium difficile R20291]
MKALQEKILREGSVSGNDILKVDSFLNHQIDVAFLNEIGREFKERFKGEKVDKIFTIEASGIAIASIVSQ
YFDNAPVVFAKKSESKNLDKDVYETNVYSFTKAREYSVKVSKKYINKGENILIVDDFLANGRAALGLKDL
IEQAEANLVGVGIVIEKGFQAGGALLKANDVRLESLAVVESIDNGTVKFR
>gi|260687570|ref|YP_003218704.1| mannitol-1-phosphate 5-dehydrogenase [Clostridium difficile R20291]
MKKAIQFGAGNIGRGFIGSLLVKSGYHVVFADVNEEILNSINKDKKYTIHIRDVECIDEVIDNISAVSSI
KEEIIDEIVQAEIITTAVGPLVLTKIASTIAKGIKARKEKGLTSNLNIIACENAIYASSSLKEEVLKYLN
KEEVEYLEMYVGFPNCSVDRIVPPGKNENPLDVTVENFYEWNVEKQGFKGEIPTIVGMNLADNLMAYIER
KLFTLNTGHAITAYIGYLKGYKTIEESIKDKFICDIVKSAMVESGEGLIKKYNFDSEVHYKYIDKILNRF
KNPYLNDDVLRVGREPLRKLSDKDRLIKPLMTAKSYGLSVDNLILGIGAALHYNNSEDTQSVELQELIKS
IGVKKAVAKIANISNDEEILNNIEKSYIFMKNL
>gi|260687571|ref|YP_003218705.1| PTS system, mannitol-specific IIa component [Clostridium difficile R20291]
MSKVLNENNIFLGLDSVSKEEAITLAGRKLVENGYVKEEYIPAMLEREKVMTTYMGMGVAIPHGVNEAKK
EILSSGIVILQFPNGIDFDGEKAYLLIGIAGVGDEHLEILSNIAVVLDDDLTERLKNSNDKQAFMEAFAN
>gi|260687572|ref|YP_003218706.1| putative transcription antiterminator [Clostridium difficile R20291]
MDNLKKKKITSRQKKIILMIVENSKKNIPITISEIAGTLELSSRTVLRDMSGIEKWFDENDFNFVKKPGV
GLILEENIENQNFIIELLEEEKIEKEYSKEERNLIILSKLLVSNEPVKSYYFAKILKVSEGVLNNDFALA
SKWLERFDIELVRKPGLGVYLKGQEKNFREAYVNLIYDSFNEKEILDMVRNISENIQTDKAIEILSENRL
LNLMDRCIIRKVEATLTKKLSDLDVNLADSAYIGLVVHISLALQRIKNGENITMDKEFLKELSITEEFKL
AKEIVKGMETDFNMDIPVDEVGYITMHIRGAKQRSSSNHKALNLDDIEIMEITNKMIDLAEDEFKISLKN
DERLFKDLANHLGPSINRLNMGLEIRNPLLDEIKSKYSYAYDGVEKISRIIKDKLNINSIPESEIGYIAM
HFASAIEKNLMMNTNINIVVACPTGIGTSRFLSTKIENKFPNLNILETISAINIDEEYLKEKDVDLIVST
VELNTSLNYICVGPFMSLDDEQIIKEKIKSIAQNKLINLNAKNDTKSKNKVYEQITESMNIGKDILQFLE
EIRFEKFESKDLSELIEDSSKIFAKSSEDIISIKESLKERLKISIPYIEESKILLLHCMSERIDIMKLSI
IKLENRIVLDSNEEIDNVVFMLLPKNSPSYQRQIMSEISGSLIDNIIFTNKINKFSIEEMTLEVKDIVFN
FYTNRLKAFIDK
>gi|260687573|ref|YP_003218707.1| PTS system, mannitol-specific IIbc component [Clostridium difficile R20291]
MSSSNQSTIKTSIQRVGKFLSGMVMPNIGAFIAWGLITALFIPTGWMPNEKLSTIGDPMIKYLLPLLIAY
TGGKAIAGQRGGVIGAAAAMGVIVGADIPMFIGAMIMGPFAGWVIKKFDKFVDGKIPTGFEMLVNNFSIG
IIGMLLAILGFYAIGPAIVAGTALIESGVQFIVSKSLLPLVSVFIEPGKVLFLNNAINHGILGPIGIAEA
KEAGKSIMFLLESNPGPGLGVLLAYWMFSRGSVKQSAPGAVIIHFFGGIHEIYFPYILMNPVLILATMAG
GAAGILTFSILGAGLVAAPSPGSIFALMALAPKGGLLPVLAGVAVATVVSFLVAAPFVKRASANQSEEDS
TSLEEAKAKMSDMKSASKNSEKNIEEKQLEVNEIKKIVFACDAGMGSSAMGASRFKNRIKNLDLNIEITN
SSVDNLPDDTQIVVTHNTLVERVAKNNSSVEIVSINNFLNDPNLDALFKRLESK
>gi|260687574|ref|YP_003218708.1| inosine-5'-monophosphate dehydrogenase [Clostridium difficile R20291]
MAFYFDTPSHTFSEYLLVPGFSSTDCIPANVSLKTPVTKFKKGEEADIYMNIPLTSAIMQSVSDDKMAIA
LAKEGGISFIYGSQTIENEAAMVARVKSHKAGFVVSDSNIKPDNTLKDILDLKEKTGHSTVAVTEDGTST
GKLLGIVASRDYRISRMDLDTKVSEFMTPMSSIVYANKDVTLKEANNIIWDHKLNSLPVLDDNGNLMYMV
FRKDYSSHKENPLELLDSSKRYVVGAGINTRDFAERVPALVEAGADVLCIDSSEGFSEWQKITLDFIREK
YGDTVKVGAGNVVDREGFLYLAEAGADFVKVGIGGGSICITREQKGIGRGQATSIIEVAQARDEYFEKTG
IYIPICSDGGIVYDHHITLALAMGADFIMLGRYFSRFDESPTNKVNINGSYMKEYWGEGSARARNWQRYD
LGGDKKLSFEEGVDSYVPYAGSLKDNVTLSLSKVRSTMCNCGALSIPELQKNAKLTLVSSTSIVEGGAHD
VMLKDNRNL
>gi|260687575|ref|YP_003218709.1| putative toxic anion resistance protein [Clostridium difficile R20291]
MNNLDDIPVMPTLTLDPFGEESNTNDIDNSDLLMKKDEKDPEEEKLSESERKMVKEFAEKIDITNTNMIL
QYGAGAQKKVASFSETALKSVKTRDLGEVGDMLTNLVTDLKAFSADEKEQSGFLGIFKKANNKISNLKTK
YDSAEVNVDKVSKELQKHQVKILKDIAMLDKMYELNLAYSKELTMYIIAGKQKLKDMKEYEMPKLREKAR
LSGSTEDAQSVNDMVSLCDRFEKKIHDLELTRMVSLQMAPQIRLVQNSNNLMAEKIQSTIVNTIPLWKNQ
IVLALGISHLNQAMKAQREVSNMTNELLLKNAETLKMGTIETAKESERGIVDIDTIKKTNQSLISTIDEV
VKIQHDGRIKRQEAEVELSKIENELKSKLLEFTVK
>gi|260687576|ref|YP_003218710.1| hypothetical protein CDR20291_2226 [Clostridium difficile R20291]
MYKSENFSKKSVLINSFLSKFLKIIGWGLVSLFTLSALVLSTISIIIGWAVILPIQVCAVFLLIGGVCIF
KGKRLGDQISRYKKYCTIINNRNIIPVELIAENTSKSLNFIIKDVQKMIDKNYFINTYIDKRNNQIVLTN
EDFIPPRYEDVAYEVKEEEKTDESNEVDTIINKGMNYLTQIKEANKNIKSESMGDKIVQVEDVTSKIFDV
VKHDPSKLTQIQKFMDYYLPTTLKLLNSYHTLEEQGIDRENITTTMESIENTMNTIVVAFENQLDYLFED
EAIDISTDITVLENMLVQEGLTSGKF
>gi|260687577|ref|YP_003218711.1| NAD-dependent 4-hydroxybutyrate dehydrogenase [Clostridium difficile R20291]
MEALRVVPKIFYFDTFKEFNEEFKIGKNDLVITNEFIYEPYMKPLGIDTNLIFQEKFGTGEPSDEMIDSM
TKEMKKYNFDRIIAFGGGTIVDICKILALDVPEKSIDLFEGEVSPKKVKELVVVPTTCGTGSEVTNVAIA
ELKSKHTKKGLAVEETYADYAVLIPETVKGLPYKFFVTSSVDALIHAIESYLSPKASPFTEMYSLQAIKM
IMDGYKKIVDKGEEERFNHLRDFVLASNYAGIAFGNAGCAAVHALSYSIGGAFHVAHGEANYQFFTEVFK
MYSRKKPNGKIIKCTKILADALECDPNCDVYGELEKFLNKLIAKKALREYGMVESQIDEFTDSTIANQQR
LLANNYVELSREEIREIFANLY
>gi|260687578|ref|YP_003218712.1| 4-hydroxybutyrate CoA transferase [Clostridium difficile R20291]
MSWQELYQSKLCSATEAVKQIKNGDTVVFAHCVGEPPALVEAMIENAEQYKDVEIKHMVSLGSGGYTAKG
MEAHFRVNPMFVSGNVRKAIENGDGDFTPAFFHEVPKLLREKRLKCDVVLAQVTPPDEHGYCSLGTSVDY
TYEAIKTARTVIVQVNDQFPRTYGEVVHVSEFDYIVEKSQPLFELQPAKIGEVEEAIGKNCASLIEDGST
LQLGIGGIPDAVMLFLTDKKDLGIHSEMISDGTLALYEKGVINGKYKNFDKEKMTVTFLMGTKKLYDFAN
NNPAVEVKPVDYVNHPAIIMKQHKMVSINSAIQVDLMGQVVAEAMGLRQFSGVGGQVDFIRGVSMGEDGK
AIIAMPSITTKKDGTVISKIVSIVDEGAPITTSRNDVDYIVTEYGIAELKGKSLRERARNLINIAHPSVR
ESLAVEFEKRFKEKY
>gi|260687579|ref|YP_003218713.1| hypothetical protein CDR20291_2229 [Clostridium difficile R20291]
MTCGVRFCGGCNPRYERGKALTIIKEHFNGRVDFSIAQENVEYDLLLIIGGCATLCASYQQYKVKNECVK
MWDFSHIERVINVIESAICET
>gi|260687580|ref|YP_003218714.1| gamma-aminobutyrate metabolism dehydratase/isomerase [includes: 4-hydroxybutyryl-coa dehydratase; vinylacetyl-coa-delta-isomerase] [Clostridium difficile R20291]
MALMTGAQYIESLRKLNTKVYMFGEEVKNWVDHPMIRPSINCVAATYDLAHDPEYADLMTVTSNITGEKI
NRFGHLHQSVDDLIKKVKMQRLCGQKTASCFQRCVGMDAFNAVYSTTFECDKAHGTNYHDNFVKYLTYIQ
ENDLVVDGAMTDPKGDRSLSPSAQPDPDMFLHIVERREDGIIVRGAKAHQTGSINSHEHLIMPTISMTEA
DKDYAVSFAVPSDAEGVFMIYGRQSCDTRKLEEGADVDLGNKEFGGQEALVVFDNVFVPNDRIFLCGEWD
FSGMLVERFAGYHRQSYGGCKVGVGDVIIGAAALAADYNGANKASHIKDKLIEMTHLNESLYCCGIACSS
EGHKTEAGNYQIDLLLANVCKQNVTRFPYEIVRLAEDIAGGLMVTMPSEKDFKSDLKVGTSGMTIGEVCN
KYFKASSVASTEERMRILRFLENICLGSSAVGYRTESMHGAGSPQAQRIMISRQGNINQKKELAKKIAGI
KKEEALNL
>gi|260687581|ref|YP_003218715.1| succinate-semialdehyde dehydrogenase [NAD(P)+] [Clostridium difficile R20291]
MEKAVENFEDLSKEYINGYIERARKAQREFECYTQEQVDKIVKIVGKVVYYNAEYLAKLAVEETGMGVYE
DKVAKNKSKAKVIYNNLKDKKSVGIIDIDRETGITKVAKPVGVVAAITPCTNPIVTPMSNAMFALKGRNA
IIITPHHKAIGCSTKTVEMINEELEKIGAPENLIQILDQQSRENTRNLISSADVVIATGGMGMVKAAYSS
GKPALGVGAGNVQCIIDRDVDIKEAVPKIIAGRIFDNGIICSGEQSVIVAEEMFDKIMDEFKNNKGFIVR
DKVQKEAFRNAMFVNKSMNKDAVGQSVHTIAKIAGVEIPEDTKIIVIEADGPGEEDIIAKEKMCPVISAY
KYKSFEEGVAIAKANLNVEGKGHSVSIHSNTVKNIEYAGENIEVSRFVINQCCATSAGGSFFNGLAPTNT
LGCGSWGNNSISENLDYKHLINISRIAYYMPENEVPTDEELWG
>gi|260687582|ref|YP_003218716.1| succinyl-CoA:coenzyme A transferase [Clostridium difficile R20291]
MNNEGAFEELSGRLRNKELCDLIMNADEAAKIIEDGMVIGVSGFTPSGYPKAVPLAVSERAKSGEKIKLT
VYSGASLGPEVDGAWSEAGIIERRLPYQTNSILRNNINKGVVDYIDMHLSHSTQFLNYGTIPKVDVAIVE
ALAITEEGNIIPTSGIGNSPSFIKSADKVIVEINLAKPMEMEGMADIYITENPPNRKPIEINHPKDRIGT
TYIPCGLDKIAGVVITNMQDKTRPLGVVDEASKKISNNIIAFLREEVKAGRLSKNLLPLQSGVGSVANAV
LYGLCESEFENLTCYTEVVQDSMLDLIRMGKVTMASTTSVSPSPEGLIKFEKDIDFFKDKIILRPQEISN
NPEIARRIGVIAMNTAIEVDIYGNVNSTHIMGSKMMNGIGGSGDFARNGAITIFSTESIAKNGDISSIVP
MVSHVDHTEHDVMVIVTEQGYADLRGLAPRERAIKIIENCAHPDYKEQLRDYLNRACKSGAKQTPHILDE
ALSWHSKFMSTGTMKKAETFKSAL
>gi|260687583|ref|YP_003218717.1| hypothetical protein CDR20291_2233 [Clostridium difficile R20291]
MKGSDLVKFELMDFLMNPFVLMFAAVITGILFGKIKFGKFNFGVSGALFTGLFIGWLAYSLGNLIIAKGE
TAAGYKAATVMMGNGIISSDFFDFFLIIFVAAVGLLAAKDMKAVLKKYGARFVILGVLITFIGGSMTYAM
TLLSSDKGSSAYEVSGVYTGALTSSPGLAAALETAGKHAEDVSKEFEKASIKDKKEILKVVDPEGKLDVN
TTTSLTQEQIDKYIAYAEAGVGIGHAVAYPFGVLIVILGVNFLPKLFRMDLKEERRKYEKEMKEARDSVS
GKTIPEVPFNIITFFLTCLAGYLVGGIHVFMGPLGYFTLGATGGSLIVSLVLGYIGKIGVVNFRMEEKVL
NILKQIGLVFFLAIVGLRYGGKVVDSIMTSGMHLALVAIAVGVTAMMIGFLVGKYVFKLNWILLSGAVCG
GMTSTPGLGAAVDALDSDDPAAGYGATYPFALLTKVILVIVLHKLPM
>gi|260687584|ref|YP_003218718.1| LysR-family regulatory protein [Clostridium difficile R20291]
MNINYLYYFQTVCKYKNMTKAAESIHISQPSITLAIKELEKELGFELFYRIGNKIELTPEGKIFLDKSKH
FIKQFEDFQCDALDLGKKRKASLKIGIPTVLGTFLLSKILPRFNVIYPDIELKIFEVPTFVGAKMIEEST
LDFCIGIIDSDIYDDIDSKTIYKTELYLVTNPKNELAKHPIISNYMLKNVPFVILSEGSYHYKIITKRLE
KAKPNIILHSNQLSTIRYLLENDLASTILYKEIFQNTENLCSIPLERAITANIGVLWRRNQYISHSMKLF
IEYMASIHIN
>gi|260687585|ref|YP_003218719.1| hypothetical protein CDR20291_2235 [Clostridium difficile R20291]
MYKKHKFIKNIKKAWYKIKLIDRCLIIVMAILMFQSIYNLFVNEVNSQDTTTIDVVVRTTSAAIFGYFLS
ANFIKRPLRKYTNTDVSSNLFIDNNLPPKGQESSQNNIMNVKNTIGFTSEADNYEKKIPINNNEGFEEGE
TSELQIIIATVICIAALTVLFVVRNFTTTTSASLGTISQMRDFVSGCVGFLLGCPSKPD
>gi|260687586|ref|YP_003218720.1| putative Xaa-Pro dipeptidase [Clostridium difficile R20291]
MSRVKNVVGLLGTKGVDALYLTKKTNVNYISGFPDEEAYAVICKDGNFLVTDSRYMELAEKVCKDFEIIN
WHNFDRSVAKAVKSVCDKVGIKKLGFERTNIVFDKYEELKNLIEKDNGELIPTENIVETLRYVKDKDEIK
NTRKACEIADKALEELIPHIKAGVSEIELATKLEYFMKMNGAQNIGFETILISGAKTSLLHGKPSDKIIE
KGDFVLIDYGAMYNGYISDTTRTFIVGGASEKQLEIYNLVKEAQNVGVENMKAGVHATIPDAEIRKVVKK
YEDYYYQGIGHGVGRDVHEEPFIGNYGDKIIEEGCIITMEPGIYFPGWGGVRIEDTVLITKNGPERLTKF
PKDLMILDK
>gi|260687587|ref|YP_003218721.1| glycine/sarcosine/betaine reductase complex component C alpha subunit [Clostridium difficile R20291]
MSKKVIADVFLEVANAIESGEFGKKVKIGVTTLGSEHGVENMVNGAQLAKSNLFDIVLIGPKVETDLEVV
EVNDEKEMHAKMEELLDSGYIDACVTMHYNFPIGVSTVGRVITPAKGKEMILATTTGTSATNRIEAMVRN
AIYGIATAKSMGNKCPKVGILNVDGARQVEKCLKELKDNGYDMEFADSIRADGGCVMRGNDLLVGAPDVM
VTDTLSGNIFMKVFSSYTTGGDYEAQGFGYGPGVGEDYDRKVLIVSRASGSPVVANALKYAYDVVKGDIS
NVARNEFAKVKKAKFDDIISSLTKKEVKAEKVEVKMPDKEIVTRQIAGVDIMDLEDAVSELWKNGIYAES
GMGCTGPIVLVNEAKGDLAVETLVKAGYTAK
>gi|260687588|ref|YP_003218722.1| glycine/sarcosine/betaine reductase complex component C beta subunit [Clostridium difficile R20291]
MEVHKMTYPVLKGAGYVLIHTPDMIVQNGSTCTVERATNSDSEFLKEVSNHIRSYEDVVNYMPNQVYIGN
RRPEELRDLPMPWCEQKIEGTRNGKFGEIMPQDEFIALMQISDAFDLVKLSQEFIDEVKPKIENNYPEIA
PFVGKLKGDDIEEGKELVATHIAEGLYHDGKFVGYVKRAHDVDVNLNAHTMFENLVVKASGVLSAIQMLR
HSKIDPAEIDYVIECSEEACGDINQRGGGNFAKSIAEIAGLQNATGSDTRGFCAAPTHALIQAAALVKAG
IHKNVMVVAGGASAKLGMNAKDHVKKGLPVLEDVVGGFAVLVSENDGVNPVIRTDLTGKHTVGTGSSPQA
VMTALITSGLDRANLKITDVDVYSVEMQNPDITKPAGAGDVPEANYKMIGALAVKRGDLEKKELKDFVSN
KGLPGWAPTQGHIPSGAPYIGFLIDDLTTGNRNRAMIVGKGSLFLGRMTNLFDGVSFIAERNTGVTEETS
GISKDEIKKIIAESMKKLALDMLEE
>gi|260687589|ref|YP_003218723.1| glycine reductase complex component B gamma subunit [Clostridium difficile R20291]
MGKLKAVHYINQFFAGIGGEEKADTKPHVAETLPPISLQLDKLLGEDIEIVGTVVCGDSYFNENIDSASE
EVLSMVKGFEPQLFIAGPAFNAGRYGVAAGTITKVVKDALNIPALTGMYVENPGADMFKKDVYVVETSDS
AAGMRKALPKIAKLAVKLANGEEIGTPKDEGYIARGIRVNYFHEDRGSKRAVDMLVKKIKGEPFETEYPM
PNFDRVDPSKAVKDLSKCKIALVTSGGIVPKGNPDRIESSSASKYGTYSIAGVMDLTEETYETAHGGYDP
VYANLDADRVLPVDVLRDLEKEGVIGKLHETFYTTVGNGTSVANSKKYASEIGAALVADGVDAVILTST
>gi|260687590|ref|YP_003218724.1| glycine/sarcosine/betaine reductase complex component A [Clostridium difficile R20291]
MSLLSNKKVLIIGDRDGIPGPAIEECVKTVEGAEVVFSSTECFVTAAGAMDLENQNRVKDAADKFGAENV
VILLGAAEAEAAGLAAETVTAGDPTFAGPLAGVALGLSVYHVVEEPIKSLFDESVYEDQISMMEMVLEVE
EIEEEMSGIREEFCKF
>gi|260687591|ref|YP_003218725.1| glycine reductase complex component B alpha and beta subunits [Clostridium difficile R20291]
MRLELGKIFIKDIQFGDVTEVKDGVLFINKQEMLQEIGGDEHIKSIDIELARPGESVRITPVKDVIEPRV
KVEGNGGIFPGIMSKVDTVGEGKTHALKGVAVVTTGKIVGFQEGIIDMTGEGAKYTPFSKLNNVVVIAEP
IDGLKQYAHEKAVRMIGFKAAMYLGEVARNLTPDEVSVYETKPLLESIKEYPELPKVGYVYMLQTQGLLH
DTYVYGVDAKQIVPTLLYPTELMDGAIVSGNCVSACDKNPSYVHINNGVVEDLYARHGKDINFVGVIITN
ENVYLADKERSSNWTSKLCKYLGLDAVIVSQEGFGNPDTDLIMNCKKIEMQGVKTVIVTDEYAGRDGGSQ
SLADADVRADAVVTGGNANQVVVLPKLDKVIGHLEVVDVIAGGSDGSLRADGTIEVEIQAITGATNETGF
GHLTAKGY
>gi|260687592|ref|YP_003218726.1| thioredoxin [Clostridium difficile R20291]
MLDLDKATFEEEVLNAEGFVFVDFWSEGCEPCKALMPDVHKLAETYGDKIKFCKMDTTKARRLAIKQKVL
GLPTMAIYKDGEKVDEVTKDDATVPNIENMIKKYL
>gi|260687593|ref|YP_003218727.1| thioredoxin reductase [Clostridium difficile R20291]
MENVYDLVIIGSGPAGLAAGLYGARAKLKTLILEKDKTGGQIVITHEIANYPGSVPNATGPSLIARMVEQ
CKEFGAEMLRDNIVDTELDGDIKVLKGEKAEYRAKAVIIGTGATPRKIGCPGEKELTGKGVSYCATCDAD
FFEDFEVFVVGGGDSALEEAMYLTKFARKVTIVHRRQGFRCAKSVEEKAKANPKIEFLLDTVIEEIKGDG
ILESVVFKNKVTGETHEYFADEEDGTMGVFVFVGLDAQTDLFKGKVDMDEKGYIITDEDMRTNIPGVFAA
GDCRSKTLRQVVTATNDGAIASIVAEKYIDEKFGN
>gi|260687594|ref|YP_003218728.1| putative glycine reductase complex component [Clostridium difficile R20291]
MIIITNNPKVKEEVQGREVLFKDTTYIGILEASRDLIHEGYELLSHPLYGSVKPNETPYRTVILKKGNRL
DINSLTLIEEAIITASKFQDNKKTPKWTENVQDDFRVIDYDIFYNTIQRMQYE
>gi|260687595|ref|YP_003218729.1| putative oligoendopeptidase [Clostridium difficile R20291]
MKFSEFKYERPNYNSMKKEFLSCVEDINNSRNYKEQQKNIHKINLLRNKIETLSNIASIRYSTDTFNKFY
KEEKNYWDEYMPLYEELNSHFYNAIVNSKFKYDLIKEFGEQFFTIVEYSLKSFSKEIISELQEENKLCSE
YTRLLASAEIMFDGNIRNLSGMGKFMYSKNRKTRELANKAYYNFFEENETKFDDIFDKLVKLRDKISKKL
GFEDFVELGYVRMMRSDYREDMIKNVRKQVLKYVVPMANELYEKQAKRIGLEYLSYIDEGVEFLTGNASL
KGDSRYIIQNGKRMYSELSKETNEFFDFMLENELMDLETKKGKGAGGYCTYIPDYKSPFIFSNFNQTADD
IDVLTHEAGHAFQLYMSRWIDMPEINFPTLDSCEIHSMSMEFITWPWMDLFFKEDTDKYKFTHLSSSIKF
IPYGVIVDEFQHYIYKNPNVDKSKRKEIWRFLEKKYLPHRKYGDNSFLERGCWWFKQGHIFKNPFYYIDY
VLAQICALQFWKKMIQDRDAGWKDYINICKVGGTKSFLDIVSMGNLYSPFDDGCIESIIGDVKSWFDEIN
DSKL
>gi|260687596|ref|YP_003218730.1| putative hydrolase [Clostridium difficile R20291]
MYKLIALDIDGTILNTQKRITPEVFESIQEAKRAGAKVVITTGRPLPGVKELLNQLNLTDEGDYVICFNG
AIIQEVKSEKIIHDVEMTLDDFDFIYNNVCKKYKTKIHINTMTNLITPNEAPGKYTLHEAKLNNIEVKYI
QKDKIDESIKICKIMIVDEPERLEEIIQQLPKNLFNKYTIVRSAPFYLEFLGKTTNKGTALKTLCTNLNI
PIENAIAVGDEENDQHMIKYAGLGVAMGNARNSIKEIADYVTDTNNENGVAKVINKYILNKAI
>gi|260687597|ref|YP_003218731.1| hypothetical protein CDR20291_2247 [Clostridium difficile R20291]
MSQIEKYNSLDNTQQKIRISIMDMIIDKGSSVTLQEVTEYVSKKLNIEKEYIERTLQYFIYENIMVVDGN
SINFIYPVSALQTNHKVTLRDNRSFSAMCAIDAIGTSCTFNQDIKINSICSATGKEIEVIIKNEKIEYVN
NPNLRVLHINLDKHLNWAASC
>gi|260687598|ref|YP_003218732.1| putative aliphatic sulfonate ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MEVCRLMKLSVRDINKTFVNNRVHTKVLEDISMDIDDGQFVCLLGPSGCGKTTLLTIIGGFQKSERGDVF
INDKRVKKPGIDRAFIFQNYALFPWKTIRGNVLFPMKQQKIPKEKREEMLEELLVMSDLKGKEKLFPHQL
SGGMKQRVAMIRALACNPEVLLMDEPLGAVDFQMRQNLQEELERIWIKKKITALMVTHDVDEAVYMSDRV
IVMSRDKGRIIDDINIDIPRPRIRGSQKYEEYKNKLTDTLSKCYEV
>gi|260687599|ref|YP_003218733.1| hypothetical protein CDR20291_2250 [Clostridium difficile R20291]
MQWALSSEEIDIAIICKDAAKQYVNVNSGFEIVGTVVQNSDIFLLSDNNPEKIGVIQNRDYQSELVKKYY
KNVEVAPLLGTALAYGLESNLVDGVVIDCIKSIGLEGKRKSTTKLGDYDTYVLVVSKEFKKSKAYSDFIT
LYNKSVDALKNKATFKKALKEYRNIRNIDMEEISNWKLKFLKIKAID
>gi|260687600|ref|YP_003218734.1| hypothetical protein CDR20291_2251 [Clostridium difficile R20291]
MENIKNIIILFIIILGSIFIIFFNFEDKEEIKGKLRIGVSDDTSGFVINYMVNRDYFENIKVSDIMDIFT
INDC
>gi|260687601|ref|YP_003218735.1| putative sulfonate ABC transporter, solute-binding lipoprotein [Clostridium difficile R20291]
MKLSKKIQALILFGVMGTSILTGCSSKPKEKEEAKAGKDDYTITVGYYNCDHMTAGPVAESAGIYKDLGL
NVKTVGNGKVPEAMAAGKMDAGYIGTKGLVGAIPKGSPITIAANNHTGGSEYLIVSKDIKEPKDLIGKKI
ATDMSDFLWTSDYGPETGLPTDPSKYEVVNMDSDKDKYLALKTGKIQAFTSCDPWGSVAENDGAGKIIAS
TQYKEKANGKEYNCCSFSLNKNFIKEHPDLAKKLVLAHTKAIEYIYTNPAEAAKIFAKYYNVEEEVALRT
IYKKTVGEGRTLTWKVTGEEYKNNLQMYKDLKALDDIPKYEDTIDTSLLDSCGADDFDKFIKEKVNPEFP
EGMSYEDWKAKVL
>gi|260687602|ref|YP_003218736.1| hypothetical protein CDR20291_2253 [Clostridium difficile R20291]
MLKKIVIISCIVVVLIILSKIVDDNIKEDASIPNVNKETLEYFRKNYKEDIITCAEEDLNNDGKKDLVVI
YKKSNNSNEMVVVVSDKNSHYITKPIPAPIENQTITFKNIDDKAPIEVIVSGSKNGNVGYAIYRVEGKKF
VDLFGEDMDKCC
>gi|260687603|ref|YP_003218737.1| putative permease [Clostridium difficile R20291]
MNILEIVLNGVKDTIVASIVTLNGASGWLMISFILAGVLHNVLTPRRFQKQLGNKKFSSLIKSTISGMFL
PICSCGVIPLGISMYYSGAYLGPVLAFMTSTPIINPIAVVLCLGLLGPKVTIIYLIAGFLVPFLVGFLGN
CFGKEELSLYNDSEEEVIELEEEKRSFMENMIDGLKWSFGELALTISKYVVMGMVFAGFITTIFPNSIIQ
KYLGNPGLLSLGSIAILACVMYVCAVGHIPFIAALVASGASPGIAITFLIAGAATNLPELISMFKLIGKR
TVIIYSVTLTLSSIIIGYITNLLLVNNNSVNLDATNSSIQLANKLMLNIPDSFEYVCTILIILFAFKSTI
PKMKEVIGNHA
>gi|260687604|ref|YP_003218738.1| hypothetical protein CDR20291_2255 [Clostridium difficile R20291]
MFIKKMSEKYADKLEIKLYQAGKDFSYIKKYGIITKGTLIINQKKKYDRLNKDTIERAIVEAINNN
>gi|260687605|ref|YP_003218739.1| hypothetical protein CDR20291_2256 [Clostridium difficile R20291]
MKVAYIFSSTNTHKILDKMIIPQLEQGTHGVDVLGMFFFMDNTLFLSKGNPVGERLSKLHEKTDMIIMAC
DQCAIERGIENNLVDGATIGCFPNLYACLGSAGVDQVITL
>gi|260687606|ref|YP_003218740.1| nicotinate-nucleotide pyrophosphorylase [carboxylating] [Clostridium difficile R20291]
MNYLIIDRMIQDALIEDVPSEDITTNSIVDENSKSTVDLICKQDGIIAGLGVFKRVFEILGDVDVKLYKN
DGDRVKNREKIAVLTGSTRNLLVGERVALNYLQRMSGIATITSRYVEKLEGTNTKLLDSRKTIPNLRILD
KYSVKVGGGCNHRFNLSDGILLKDNHIGAAGSVKKAVELARKNTSFVRKIEVEVETLDMVKEAIEANADI
IMLDNMSLEMAKQAVDIINGRAIVEFSGNVNLDTIEDIGKIGVDVVSVGALTHSVKALDISMKNLRNI
>gi|260687607|ref|YP_003218741.1| L-aspartate oxidase [Clostridium difficile R20291]
MNLEQDVLIVGSGVSGLYCALNLDKSLNVLVVSKSTIENNNTYLAQGGISTARNIDDIESFVEDTMKAGQ
YKNRVEAVQVLADESIENVGQIVEYGMPLDKENGEIDYTREGAHSVNRIVHSKDNTGEVVFKTLLKEAKT
RENITLIEDAYLLDILKDGNKCIGARIFKSKKEIHVFSKIVVLATGGIGGLFKNSTNQRHLTGDGIAIAL
RNNIKIENLEYIQIHPTAFYEENNEGRRMLISESLRGEGAKLLNKNKERFVDELLPRDVVSKAIFEQMEK
DKLPYVYLDATHLDSEYLINRFSFIYNECLARGTDITKECIKVSPAQHYFMGGIHVDLDSKTSMENLYAV
GEISCTGVHGANRLASNSLLEGLVFSKRAAKNINSVIDNVKVKFIDVPDMDIDIEQVKKENKILVIKEIE
RTSEDFGDELFDY
>gi|260687608|ref|YP_003218742.1| quinolinate synthetase A [Clostridium difficile R20291]
MDKDLTYQIKELKKEKNAIILAHFYQPPEIQELADAVGDSYYLSEIARDCKEEVVVFCGVRFMGESAKLL
SPEKTVLMPVSNAGCAMADMVDEEGVIKLKQQYPNALVVCYINSTAKVKAHCDVSVTSSSAIKILENIDN
KEIIFLPDKNLGGYIAEQFPDKNFIFWDGYCKYHNNIRAEEIIELKDKYKNAEVLVHPECKKEIRDLGDY
VGSTSGIIKYATNSKNKDFIIATEEGILHELKKNNPNKNFYIPGGKILCTDMKKTTLENLYSTLKNMENE
VIVEDEIMEKALNSLLNMHKLAEG
>gi|260687609|ref|YP_003218743.1| putative carbon starvation protein [Clostridium difficile R20291]
MYTKTKKFYKWGDIMTTFLIGLAILLIGGALYGAYCEKVFGPDDRKTPALAQSDGVDYVPMKKWKNSLIE
LLNIAGTGPILGPIQGILFGPIAFILIPIGCVFGGALHDYMSGMISIREKGAQMPSLISRFLGNKVFQVY
NIFLCLLMLLVGAVFIYTPGDLVVTQILNMKSTINNPVVWIVYGLIFLYYLCATLFPIDKIIGKVYPIFG
AILLLSAAGVGIGIFTQGYDLANLSLANWKGIHPDGIPLIPTFFVTVACGIVSGFHSTQATLIARSVSNE
KEGKTTFYNMMILEGLIAMIWAAAAMGIYNKGIPKELVGSPDVIGLVARDLLGSIGGIIAIIGVIVLPIT
SGDTALRSLRLMLADYFHYDQKEKKHRVILSICIFIPVIAILIFAKLSASGFNILWRYFSWSNQTIAIFA
FAMITVYLIIKEKNYIISLIPGMFYSFVIFSYIFNAQIGFNLNINISYVLAAIFTVLYAILTVRSGRKLK
SKADTKLAD
>gi|260687610|ref|YP_003218744.1| hypothetical protein CDR20291_2261 [Clostridium difficile R20291]
MNNKLHELEKNLPETSCSFCTHLSFKGPSLDYRYDIRCVISDTKPDFRGCCEYFEPEYTELNTGDLDNLY
INFLETCLKVNYNDYINSMYWKLFKERTLLENNFKCSICGSTENVDVYHVNKNLGRETSKDVVVKCDKCN
CK
>gi|260687611|ref|YP_003218745.1| hypothetical protein CDR20291_2262 [Clostridium difficile R20291]
MKNNNLNCAATNCAYNTSGYCYAGSIKVDGMQATTTENTYCASFEDKYTSGITSRSNETNQVDTDNIHCE
AVKCKYNKNELCKAEKVHINERNASCETFEMK
>gi|260687612|ref|YP_003218746.1| hypothetical protein CDR20291_2263 [Clostridium difficile R20291]
MEDNKGLARDSSKYKIVSISVVVIILITFWYMLNMVLLTFIMTFIFYNLLVATRKRIKKFSSLNIPDSLI
IIVLYALFAILLVLISYAVVPIIIVQLTELSRVFSDFDVNQFAQSLGPKLYPIVSKLDFNKYISQAGLLI
ASTATKVGSFGVNILLAFLLSLLLLLEKNEIKNFGDKLSDSKISFIYNSLVFFGKSFVKNFGEVMKVQVM
IAFINSVVSMIFLGFMGFPQIWALGFMIFVLGLIPVAGVIVSLIPLTVIAFNTGGITKVFGVLLMICIVH
AVETYILNPKLMSNRTKLPVCFVFIILLVGEHYLGVWGLLIGVPIFMFLMDILGVKFTSR
>gi|260687613|ref|YP_003218747.1| NUDIX-family protein [Clostridium difficile R20291]
MELWDLYNADGIKTGNVIKRGNSIEEGYYHLAVEVWILNSNSQILIQKRSKSKKTLPNMWGMTTGCIVSG
EDSLEGAIREAKEEIGIDITKDEMKVFRSMIHEDTLWDVYLVKKEYDISKAILQEEEVSDIKWVSTDEIR
QLLKEGLFFEYPEMYELLYEIDNNKLNI
>gi|260687614|ref|YP_003218748.1| hypothetical protein CDR20291_2265 [Clostridium difficile R20291]
MGKISLKSMIRLFSGFFIFAISSVLMINAHVGLMPWDVLHQGLSIKLGITIGQASIMVGVVIVILDAVFG
ENIGWGTLLNMTFIGIFIDLVIFSGVIPHASNTYIGVFMVVIGIILAAIASFLYLGVCLGSGPRDGLMIA
LQKKTNKSVRLVRTILEILALVVGWLLGGSVGIGTLVSALGLGYVLQIVFRIFKFDTKLLKHRFIIDDIR
EWKEKRSNEHKCKSSIVIKNEQN
>gi|260687615|ref|YP_003218749.1| butyrate kinase [Clostridium difficile R20291]
MTYRILAINPGSTSTKIAVYDGEEQILVKTIDHPAEEIAKYNTIQDQFEMRKEAVLNILKENSIDLKSLS
AIVGRGGVLPPVKSGAYLVNEEMIDVLRHRPVLEHASNLGAVVAHAISEPLGINSYIYDSVAVDELIDVA
RISGLCGMDRSSAGHALNTRAMALKYAKDKGKDYKSLNLIVAHIGGGVSIYLHEKGRMVDMLSDDEGPFS
PERSGRVPATKLVAACYSGQYSEREMTKKIRGKGGIVSYLNTVDAREVEKMIAEGNEEAKIIYEAMAYQL
AKGIGELATVVDGKVDAIIITGGIAYSEMFTSMVKKKVEFIAPVEIMAGENELESLAFGTLRVLNGEEEA
RIYSEN
>gi|260687616|ref|YP_003218750.1| putative indolepyruvate oxidoreductase subunit [Clostridium difficile R20291]
MTKSILLVGVGGQGTILASKLLTMGLMEAGYDVKMSEIHGMSQRGGSVSSQVRYGDCVHSPVIEIGGADI
LVSFEKMEALRWFNYLKPEGKALVNNHRIDSMTVLIGGAEYQESDIDAELSRLNAKVINAADKAEELGNS
KIMNVILLGCLVKSMQLESIDWEKIISENVKPKFVELNIKAFHEGMEMVSK
>gi|260687617|ref|YP_003218751.1| indolepyruvate oxidoreductase subunit [Clostridium difficile R20291]
MDYEFNNCRWREFYMKQLMTGNEAIARGAYEAGVKYASAYPGTPSTEILENIATYKDAIVAEWAPNEKVA
LEAAIGGSIAGARTMASMKHVGLNVAADPIFTYAYTGVNGGMVLITADEPGMHSSQNEQDNRMYAKFAKI
PLFEPSTSQEAKDMIKEAFEVSEKYDTPVLYRVTTRLCHSKGLVECYDREEVEIKEYVKNAKKMVTVPAN
AQIRRGVVEERMEILKKFSNETDLNYYEMNDTKIGVIASGMCCNFAKEVFGKNASYMKLGFTNPLPYEKI
KEFAEKVDKIYVIEENDPFIEEQIKAYGIDCIGKDVIPPYGEMTPDVLRKAIFGKTNDTIEYKSELVTPR
PPSFCAGCPHRGFFYELGKRKNLIVGGDIGCYTLGFAPPYNGIDYVVCMGSAFGTAHGAQKVLNMKDDNE
KRLVGVLGDSTFFHTGINGLLDVVYNRGNSISVILDNRITGMTGHQENPGSGYTLQGAKTKEVDIEGLVK
ACGIEHVRVINPNNLKEVNEALDWALAIEDEPSVIITRWPCVLKKFSKEDIEEFNNPFKTKCKVDHDKCI
GCKLCLKTGCPALSFDKENKLSNIDRNQCVGCGVCAQVCPKQAIVKEEK
>gi|260687618|ref|YP_003218752.1| putative aspartate aminotransferase [Clostridium difficile R20291]
MSQSMVGKHAMWPKENDVIFSISGRAQAAEKAFGMDNVINATIGALMDDSGKLITMKTVYEEYKALDNCE
IGAYAALEGQPDYLEAVKKVFFRDYLPEGHIRVLASPGGSGAIKLAVWNYTNEGDEVLTSDWFWSPYVSI
AEEANRKVVNYQLFDENRRFNFESFKEKFVNIAEKQGRVFTIINTPAHNPTGYSVADDEWDKILDLSKEV
AKDKDKKIIFFVDSAYIDFAGDDDVCRKFFKKFSNLPENVLVLVGFSMSKGFTAYGMRMGAIICISSSED
VAEEFHYSCVHSCRANWSNCNRSAMAVLSNIVNDPKKFKEYEDEKEIYKNMLTRRADVFVEEAERVGLEI
LPYIAGFFVSIPCDNPKEVCEELTKHNLFAVPLKMGLRFAVCAVSEDKCKKAPSIIKEALESLEVKINN
>gi|260687619|ref|YP_003218753.1| putative sigma-54 interacting regulatory protein [Clostridium difficile R20291]
MILLRKKIGIIASDIELKERIEELYREDVENGTIIIDILNLDLMENQGRILVEKGAQAIIGRGGGYSLVI
DTVNVPVIPMNMKSTDLLRAIEIAKKYSKKVVLILGDNEVSFDYVGWRNVISTEITEEWFESKYEIRSKV
VKYIDQKDEVVIVGGGLACSFARQYGIDSVFATASDESIREAVEYCKKLLDTLGEEKFNNEVLRNILDGI
KDGVIAIDSNGSIILYNESAKNMLKVERKCALNKYILDVFPKMEWMLDCLHEKEDVEDRKIRNINNLIVN
TRTTLIKVDNSTYGVLGIIQDITKLQNLERKIRFDLNQKGLYARYTFDDFLFKDKLTREFIEEAKKIGKS
DYTTLLYGESGSGKEIIAHSIHNISKRKDRPFVAINCATIAENLLESELFGYEEGAFTGARKGGKRGLFE
LAHGGTLFLDEINSLSFNIQTKLLRVIEERQIMRIGSDYIIPLDIRIIAATNESLTEKIVMGTFRADLFY
RLSSLEINIPPLRDRREDIIPLFNNFVNEVLKDDGLNGINSIDENFVLTKDEMDKLYNYSWPGNVRELKT
IAQKYVVTGKIKLRQDRDFKTKKLLPNSEVDKFNSETTASVEVQDESINISKINDGKISIDIKEVNKYVE
EKIISMLFAQGLSKNEVAQVLGISRTSLWKKYNKNI
>gi|260687620|ref|YP_003218754.1| putative signaling protein [Clostridium difficile R20291]
MIYLKRSLIEDLKRNINKIEYDMLTKFYLNLTDLNYILDYHKDLLNTKLEDNSRVYTLYLISLINYIKKD
REASYNYLIESLKYIKKLSLKEDSDIISKIYIYLTLSAISIRKYDKANNFYFSAKKVIRQNHLNELLVLL
NMSLCVEISALYQTKTDVIALVEEVSFFKTLKNKALVSRANYIFGRVYLYLFNNFIKSMEYLIECLKLAQ
ENNLYSIEAFCKCIISLCYLESGNNVEAIKYINNVLDVAHSKNSISVTERVSIKIDLIWAYLKEDMNKEA
EVILLKTIKLMKVVEGVYKDYLYSFIFLYSAEIELRKDNCSFEKVNTYLILSKNIYKSFGDVFIYNSKLD
YIYKLYGDLYIKFGNIDEGISCYIKGLNLVKKSSLNLRKISIFYGLIANGYELKKDFKLAIEYYKSMDWY
SDRWEKNNSYKTSQAIHKQYELRQKQESLRLLVDDNKKLENDILKDGLTKLYNRRYLEQQLDLFNGTRDK
NMVAILVDIDCFKSYNDNYGHLAGDKVIVKVTDIIRSVFIDITEHIIRYGGEEILILVDSIESIGVEEID
NIELYIKRVFKLLEFEGIEHIYSKIKNYITISAGVSIKRCRSRKDVEILIEDADKNLYKSKKAGRNQYII
I
>gi|260687621|ref|YP_003218755.1| putative signaling protein [Clostridium difficile R20291]
MFKLTLNERLLTNNDFVENKIGVVKNLIDCYKTEQNSLMLLKSNFLLALLYGIQGFSEKMKEYILISCKY
IDKCLPKDYKFLARFYSQIAILSLKNEDVNKANLYMDKFNLICDENNFLIEEIIFKSQLIYIKASKCIES
SVIIKEIETLYIKIKEINDFNCKKIYFFIIGKIYFLFLDDALIAKVNFLKARKYADLLKDMQVSSLCNIK
IGECECSFENYECSIEYLNEVISNKKYRNVNIIQKYRASNNITKILIKTRNYPVAINNLAKSEVYLEKIK
NQSLKEVEKFDLFISLAMYYAKSNEKSFEQSICYLDRAKNILNMIKNIEEYTIYDLEIIYHQAKIYYIFG
YYDNALNTNKKLLEKSKNAKNYNYVKLAYKNIYLCFEKIQNYEMSMKYFKMYYELKMMYIKARNRNYIDS
LNYRHEYIETEINNMRKVKLDLDKKKYVDHLTSAYNRTFLNDFLEKQEVSEYCTAFMIDVDYFKEYNDTY
GHYNGDIALKNITIIIKKYLKKDMFMIRYGGEEFLILSVCKDYKKSKIFGRKLCRIVKKFLNNNLTVSIG
IDTCKNSSIDIREIIENADKALYKAKESGRNRCLHYHDFKNF
>gi|260687622|ref|YP_003218756.1| hypothetical protein CDR20291_2273 [Clostridium difficile R20291]
MSLYKFIYDDKEYLLKEENCSALINDEENPVQGVSISKIIDILNEAEEVDFDVEYYQEACPLCLEGVKEK
KKFFPFLEYHFYIFSKDGEYVISNISVDYKGLSFNKLSRANKVDNSYIVSVIICENCQDYIVQIENCIV
>gi|260687623|ref|YP_003218757.1| putative dehydrogenase [Clostridium difficile R20291]
MNYNDLLKSARENFNGTCKVCKICNGLACAGDVPGMGGKGSGSSFIENRKSLEKIKINMRVIHNVSKPDT
SIELFGRKMSSPIFAAPVSGTLLNMGGKVSEKEYIEPVVRGCSNSGIYAMVGDTNVDTFLLDNLDVLKDN
SGNGIVFIKPWNNSKIIEKIRLSEEAGAFAVGVDLDACGLINNQFQENPFSPKTIDEIRELVESTKLPFI
IKGIMTVDDALMAVESGASAIIVSNHGGRVLDYTPGTCEVLPDIAKSVKGKITILVDGGVRTGVDVVKML
GLGADAVLMGRPFVTASFGGGLDGVEFFIEKVRNELCETMILTGCQNVKDIDGRVIWNLL
>gi|260687624|ref|YP_003218758.1| putative beta-lactamase inducer [Clostridium difficile R20291]
MLYVFDNLIKTTIVCSFGICLLLFLKRYFFKRFSKRFNYYIWLVIVFRMLLFLFNYTVMYEVKEPKENTV
GNNITQIDVSIDNDFMLYLVYLWLFVTIAIAVYTFMEYTKFKNLVVDVSYDIEDHDVNCIYKNLLKELDI
KKKIELRGSDELISPAGMGLFKSYIFLPDYTYSKDELTWILKHELMHFKNKDILIKFLVLSVKIMYWFNP
LVYIMSNKVNLDCELCCDESVLTDCSLKDKKAYALALIKSIKLSKNYNSGILTTEFNKTNLEKRLDSIIK
KKGKSGILMLLILFTLFSVTYFNFESISFDNSNYLRNIGILEKTGADLKEEDDISMRVVN
>gi|260687625|ref|YP_003218759.1| putative beta-lactamase repressor [Clostridium difficile R20291]
MMIRKIPQAELKVMKFIWKVDATVTSKDVIEVMEQKYGWKQTTTLTLLSRLVKRGFLNAQKIDRYTHYTV
IVKHKDYLSFETKDFLSNIHDDSLKSLISALHDDENIGKDTLDFLESYFDNLKNE
>gi|260687626|ref|YP_003218760.1| putative peptidoglycan-binding/hydrolysing protein [Clostridium difficile R20291]
MVFANTTTDVDTSKDDDSIISSCTITGYEFTYENAPQSVKFDYEKKCEALNIKPSKNDIIFVNKDSIDAN
DVENYVEPKAYIIRYKKGYVFEVTGPKSYTLNVSNTVVGYNRVESGNPVHLVQLLCRTLDGSSIDDDSEF
GPATYNAVKSLQGRLGLTRDGIVGRSTWDAAGRRL
>gi|260687627|ref|YP_003218761.1| putative beta-lactamase inducer [Clostridium difficile R20291]
MNNYMLYVFENLIKTTIVCSLGICLLLFLKRYLFKKFSKRFNYYIWLIIVFRMLLFLFNYTIVYEVKEPK
ENAVGNNITQIDISTDNNLMLYVAYLWLVVTIVIAVYTFIKYTRFKNLVVDVSYDIEDNDVNCIYKNLLK
ELNIKKKIELRGSDELISPAGMGLFKSYIFLPDYPYSKDELTWILKHELMHFKNKDILIKFLVLSVRIIY
WFNPLVYVMSNKVNLDCELCCDESVLTDCSLKDKKEYALALIKSIKLSKNYNSGILTTEFNKTSLEKRLD
SIVKKKGKNGILVLLILITLFSVTYFNFESISFDNSNSLRNMGILQKSGVDLKEEDDISMRVIN
>gi|260687628|ref|YP_003218762.1| putative beta-lactamase repressor [Clostridium difficile R20291]
MIRKIPQAELKVMKFIWKVDVTVTSKDVIEAMEQKYGWKQTTTLTLLSRLVKRGFLDAQKIDRYTHYTIR
VKHKDYLSFETKDFLSNIHDDSLRSLISALHDDENIGKDKLDFLESYFDNLKDE
>gi|260687629|ref|YP_003218763.1| putative membrane protein precursor [Clostridium difficile R20291]
MMPNKLIKNLLSGILQILFFLLGLVIVVGGFKSFMYLCFSGEATLQGTISGILMFILGVSYFIIIKSLIE
VLSSSEHSLFVKDNVKRFRIIGYLLLLNSIMEFISTFGTTGKGMRFLDLGFGFYFTVPVFVYFITSLMSF
VIADGFVKAIKIKEDNDLTI
>gi|260687630|ref|YP_003218764.1| hypothetical protein CDR20291_2282 [Clostridium difficile R20291]
MKKFVIEDAFWNLFPSAKIGVIICNDIDNSIKDEDYKKIILKGEEEALKYLEDSEFSNNQVIKVWREAFK
KFKTKKGARSSIEALLKRVHNGNNIGTINPLVDIYNFISLKYALPCGGEDIDKFIGDIRLTRAIGNEEFI
PLGTDENSFPYEGEIIYKDDGGAICRCWNWREAVRTMLTEDTNNAFLCIELVDESRFKEFENALNELAKI
VQEKLGGNCKISILDIDNKEVSVD
>gi|260687631|ref|YP_003218765.1| putative transglycosylase [Clostridium difficile R20291]
MGYYNDNDNNKIRRKKISNNKDSNKKSKHSYTSANKKNKSPNTSSSKRMSEKVDSQNLIKRDRDSFTRDN
VRPLNTDYNQRERRRVEYKQREKKLKSKKRKKQKRIRIVRALLSIMLVALIIFSVAGAIFTVSAIKGSPE
VTKKLIRSKYISSEVVSIKQMPNDLKHAIVSIEDERFYKHKGVDVISLVRSVLNNVFTDTTQGASTIDMQ
VSKNLLTSNDKTMKRKIRDMYNAKQMNKIMTKDEILEAYLNNMYLGKNAYGAAKGAEVYFGKKVSELNLA
ECAMLAGMTNNPARYIDHGEAKKRQVIVLYKMHQLGYITDKEYRIAKADDTPFKSEID
>gi|260687632|ref|YP_003218766.1| putative DNA polymerase III, epsilon chain [Clostridium difficile R20291]
MKEYVVVDLETTGLDPYKGCEIIEIGITEIKNEQIVKNYSRLIKPKGIISSFITELTHISNEMVENEEPL
ELVLPRFRKYIGDRTIIAHNAKFDLKFLNYYLRMLDLEPINNYICTVELLKKCKSYKGKNKKLETACAYY
NIENINAHRADSDTLATAKLFLKIKDEY
>gi|260687633|ref|YP_003218767.1| hypothetical protein CDR20291_2285 [Clostridium difficile R20291]
MENITSYFTTILCVFICLSSVFIFTQLARVFINKKKINQKIKSRNGFRYDRDFIEARREEIHIKDNNNNK
NKSNNKKLKEEKVFKYDNGDLYKGEFVDGKKNGFGIYIFSSKEKYEGLWKDDKMHGIGKYTYRDGSIYTG
EFKYGLKNGLGKLTYPNNDIYKGYFLDNKKNGKGVLYKNDGNKQAGIWENDEQCKSLDFKDLNNNKINNV
YQNRLNNNKLKV
>gi|260687634|ref|YP_003218768.1| hypothetical protein CDR20291_2286 [Clostridium difficile R20291]
MGFREVKIEELQFNPFTKIGKEWLLITAGDSEKFNTMTASWGGVGVYWGKNVVTTYIRPQRYTKEFVDSN
DTFTVAFFDETYREALNICGTISGRDINKIEKAGLTPYFVDDTVAFEEANMIIVCKKLYHGNMPPENFDA
KENDKKWYPEKDYHTMYISEIIKVLVKE
>gi|260687635|ref|YP_003218769.1| putative exonuclease [Clostridium difficile R20291]
MFILKRVYIDFEMNMPNSKSKRAVFNSDIIAIGAVMYDEKTKNIDKFKSLIRPVSNEELYPHIQELTHIS
SEELKSAPSYEEVMRKFKKWLGIFSDIKGIYTFGNLDLTCFNNTDMRSAKKNNHPRFVNNIRDLFVDIKE
KYINCGMRCMNYISLKNLLEFVNLEFSGDAHDPLNDAYNLFILDEAITNNVDIQNLLIIRDIIRPPFNDI
NSNLDNCFNKFKESLYKKEGNYNIVDFSVEIIKTVRMYLLTIIDVNIQNLEIMKDINKKMDTIDKLKDIE
EGYFYLLEDVYLDMKDVLEDLMLYRMNEDEYKYEIKNIIKMFDEDLDNEKIYINKCNNLNVVNKI
>gi|260687636|ref|YP_003218770.1| hypothetical protein CDR20291_2288 [Clostridium difficile R20291]
MSELSGKGCEIIVPFEERLPVRDIEKSIIKKYRKNLWSKFMKSIRDYKLVEEGDKIAVAISGGKDSILMA
KMFQELKKHGQVNFDVEFIAMDPGYHANIRQLLIDNCEYLNIPIHLFDSRIFEIADEIAKDYPCYMCARM
RRGALYSKAEELGCNKLALGHHYDDVIETTMLNLLCAGNFKTMLPKLNSTNFEGIKIIRPLYYIREEHII
RFIQNSGIWPLNCACMVAAKKTGNKRYEIKDLIKSLESNFKNVEKSIFKAAENVNLDSVLGWQKDGEKHS
FLENFE
>gi|260687637|ref|YP_003218771.1| hypothetical protein CDR20291_2289 [Clostridium difficile R20291]
MENKTRDIKKNCGPSLARPYINNQIFTEMYCLSDALKFGTIFPELNLLESEMYNKELYAKPKKYRGGRR
>gi|260687638|ref|YP_003218772.1| putative spore-coat protein [Clostridium difficile R20291]
MKDSSRAELMRKVQETSFACVDMNLYLDNHPDDKNAINTYNSLCNQFAQARYAYENKYGPLTNFGYAPSR
CPWQWADQPWPWDREFNY
>gi|260687639|ref|YP_003218773.1| putative spore-coat protein [Clostridium difficile R20291]
MWIYQKTIQHPVNIKTCDPRMAKFLITQFGGPNGELAASLRYLSQRYTMPTGNMRALLTDIGTEELAHVE
LICTMVYQLTSDASPEELKAAGLGSNYAQNGYGIYPTDSNGVPFDVRPIAVMSNPVTDLHEDMAAEQKAL
ATYYQLINLTDDVDVIDVLKFLGQREIIHYQRFGEALMDAYELEESQKMF
>gi|260687640|ref|YP_003218774.1| putative cell wall hydrolase [Clostridium difficile R20291]
MNFNQKRIAASIMATAIIMPTMGNLAYANESEVESVSIESRTITGNAVNFRKGPGTNHESMGKLYKGDKV
EYVGKEGSWVKVKYNGNTGYVHGNYVAINSLGSSNESSDTSVKSTKVVTAKGLNFRTGPSTSSSKISTLG
YGTEVGYISESNGWSKISSNGRVGYVSSKYLGTSVNDSTNENVENSSNDLVKGTKVVTAKSLNVRTGPGT
SHSKIATLSYGTEVGSISESGGWTKVSYGNQTGYVSSQYLAEKGSVDTSIPSYSTNSPSQGADSVISFAK
TLLGKPYVWGAEGPNSFDCSGFTQYVMKKSAGVSIPRVSRDQSKYGTYVNRGDLRSGDLVFFDTQGSNNG
SVSHVGIYIGNGDMIHASSGSSKKVTISNINSSYYSSRYVNARRVL
>gi|260687641|ref|YP_003218775.1| deoxyuridine 5'-triphosphate nucleotidohydrolase [Clostridium difficile R20291]
MYNLKVKKLNDDAIIPNFAHKGDAGMDLYSIEEVVIPPGETKLIKTGICIELPTMTEAQVRPRSGLALKH
SVTVLNTPGTIDEGYRGELKIILINHGKNDFKVEKHMKIAQMIVKPIYDINIEEVKELSDSERGKGGFGS
TGF
>gi|260687642|ref|YP_003218776.1| putative DNA topoisomerase [Clostridium difficile R20291]
MKLVLAEKPSVAKTIASFLGAKTRQDGYFEGNDYIITYAVGHLVSLYDMKDYDKDKYSGSWKMNNFPFVP
EDKFKFKIDSSKTKQFNTVKKLLNRKDVEYVINATDNDREGELIAFLIFLLAKNKKPVKRILVNEWTPED
ITRGIKNLKDEYEMRNLQAAGYTRLITDWLIGINFTSVATLKYGNGKLLNIGRVILPTVKLVYDRDMEIL
NFVPKTYYEIEGHFKAEAGEYKGKYVKGKESKFDTLEDANKIIASITSETGKILDKKVTMSKEYAPKLFS
LTSLQGYITSKYSNFTSDKVLNVCQSLYEGNGKGGYITYPRTDSIFLEESLASKASQTLDKLKVGLEYEN
KIKFSKTKRVFDSSKVDSHSAIIPTYIIPKSLSKDEQLVYDAIKDRFVANFMPPAEYENTEIKTEVDNCT
FLTKGKVLKSKGYLEVYNKEEKNDLLPLVNKDDVVDVLEIKPLTKQTTPPKPYTEDTLLKAMKNCGKNVP
EEDTTVLSGYSIGTSATRADVLKKISQVGYVKKKGKSYSITDLGKNLVEIFPVKDLFDVDYTGKLEKSLS
DIQKGKYTRKEYLTNIISFIYQNVNIIKQDASKNINTEAYTFDSKTKKFTKTKEKKQKKDVTNTEKEVAI
SKDSNNKKEVKNGDENQSLGKCPICQGDVLEFDKGFACKNHKECKFVIWKNDKYLSLYKKKVNKTMVKNI
LKKGETKVKSLTAKNGNKFDATLKYDKNPDTGYFNWKIEFDN
>gi|260687643|ref|YP_003218777.1| MarR-family transcriptional regulator [Clostridium difficile R20291]
MDNNNILKIADSFLDFLFVLENNIFKESDLLKKFQNNSDIMKAYFEECPMAPSHAKVILYLMTSNSSSIS
QIASNLGILKSNMTPIIDRLVEHGLVNKFPDPKDRRILRVELTDKAFKLFDAVKAILKESLVKKLSNLSE
EELTLLDEHTLKLSEIVKKLG
>gi|260687644|ref|YP_003218778.1| putative lipoprotein [Clostridium difficile R20291]
MQYIIGGDMKRYLIVFLMCSSLFLVGCGKTKESEPEKPIAVSVQKAVGGEIENTNSFSGTTKVKDETAVT
AQTVGTVQEVYVKLGQNVRKGDELLSISSPELENSVKQSKASLDLAKASYSSATGGSLEAQVNQAKTALD
NAKIQYEESQRNYDNNKILYEQEVISLDQFKKIEFSLEQTKQQLDSAQRAYDTATSKSIPQAKALAKKQL
DQAQVSYNLAMSNLDKLTLTSPVDGTITAKNFDSKEMITQSQPAFIISNPNILEVDLNVAESDIGKFKKD
GNVDVIIEDQRILGKIDYVPSVVDPQTSLYPVKVLVNNANNKFKAGMSAQVNLSIEKENGAVTVPKKAIF
EENGKKYVYIATKDNIAKKHLVQTGIVTEDKIEIKSGVSDKDTVIIGGISLISDGTKIFPVEKEK
>gi|260687645|ref|YP_003218779.1| putative multidrug efflux pump, membrane protein [Clostridium difficile R20291]
MNLTQTSVKRPLTIIMVFLVLIVFGGIGYKKMSINLMPDIEIPVVMVMTTWTGAGPQDVDEQVSQKVDES
LSAVSNVKSTISSSQESVSMVVAQFEFGTNLDEIMNDVRSKVDALQTSLPDDAAKPTVLKLDMNAQAIGQ
LVISGGNENSSQALRKYAEDVIQPKIESIDGVTSADLKGGEKAQVNVIADPAVLSNYGVSLSTIKGVLSS
SNKTFPYGSITQGEDKIVLRAIDKLESLDDIKQIQIPVKGGNTVRLDNLCSVDYGYADKDSIYRYNGKDS
LVIDISKQQDANTVKVMQSAYKYVDELNKENPQFKIKIANDTSSYISESINSVMSNLLISAVIAFIVIFA
FLKSVRASLVVAVAIPISIIGAIAILYFTGESLNLITASSLVISVGMVVDNATVVIENIFKYRKSGRLSL
DDCAIEGTRTVTNAILASTLTTIAIFLPIMFTEGIAKITFGALGKTLIASLAFSFIGAITLVPSVFAKLS
RGKNSQKMQEKDSPIFDKVSEAYKKLLSVCLRHQRLVVISSLLIFVASLFGMGFIGMDFMPAADKGELSI
SIELPKGLSLESNDYYVSMTEKKVSDIPEIKTLITTLTSDSNNSKASIAIELESQKNRKRTTDEIEKEII
DRVATVPDCKINVSQNSSVMGGAGGADFTLEMKGPDLDVLKILGKEAEKEFSSIKGFRNVETSLTDTTQE
AQFTIDKHKAQEYGVNTAEIAGMLRTAINGDSVTTATIDDYKVDVNLKFKADTIDSLEDIKQLKVNSATG
KEVPLGAFSDIKMADGLQSISRTDGDFSVNITATLDNLDAGTATKLALEKTNKMVIPKDYSIGVGGETEM
MNESMASLGFSMVIAIALVYMVMVAQFESFSKPFIIMFCVPFAFVGVVLSLLVSGQSLSTVGMLGIILLI
GIVVNNGIVLIDYIEQLRKTNRNNDLIGLVSIGCAARLRPVLMTTATTILGMLPTALSLGEGGETMQPLA
IVIMGGLTVSTLITLVLIPTIYLIFDKWENKFSDKMPKIFGKITDKIGSIKRKIIKKPKLKAKV
>gi|260687646|ref|YP_003218780.1| putative multidrug efflux pump, outer membrane protein [Clostridium difficile R20291]
MSKIVAIGCGVGIITANLIPVYADNNTSSINNVDNSILSDSNKRTSEKEILTAREAVSAALKNSEKLKMK
SEEIKMLKEKLEVQDEFDSFTGSDNSFPYDQIGLLKNQSEQAKGFMEDQIANDITNKFNDLVSRENELDK
IKNNLEIKTKEIKDMKLKKDLGLVTSLETESAELELQTLQNTQKAKLQELKNNQDYFKLLTNIDLNNYQL
DKEYRFESFRVGGSVDSYMEGKVNEYLKYDQLILERTEESFNDKDENKADLPDRPNLTRPVAPTKPEQGN
LTDDEYKVLMDKYEKDYKRYEKEVEAYNLERQTYAAGLTTYANYLQQKFNTENGLVTLEDSKKALKKGLI
DSYAQLLALEDTIQITKKQLDLSEKQLKNTKLRYDLGLITLTDYKKQVVSNQDAKNSYDTLIVNYNSLKN
GIEKPWILNTGK
>gi|260687647|ref|YP_003218781.1| transposase [Clostridium difficile R20291]
MSRKYSISSMCKLIGVSRSGYYKWLSYSKKSSDRGIKDRIIKDYIIEIHKKYRGTYGRKRICTYLNKILD
SPINHKKVYRLMKELGIKSIIRKKVYRRKFKSYEVYDNILNREFRANQPLEKICMDITYIPIGKKFLYMN
VAKDLFNGEIVAYEISTKMDTKLVNKTVNQLINMNLAKDCILHTDQGSQYTSRSYSKRLKDNGIIQSMSR
RGNCWDNAPIESFFSHFKSELIYLIDTTDPKEMISLINDYIYFYNNERIQLKNGMSSIEYRTHSA
>gi|260687648|ref|YP_003218782.1| hypothetical protein CDR20291_2300 [Clostridium difficile R20291]
MSLLEGIKLTKCPKCGKEVSSRPGSICPRCGFKVADESLKIRCPEPSCRALVSRKLDYCPKCGCKLRGYN
ISEFVNMVRCKIDETFDKK
>gi|260687649|ref|YP_003218783.1| pyruvate, phosphate dikinase [Clostridium difficile R20291]
MGDLTMETKYVYSFGEGSKDMKSLLGGKGANLAEMTKIGLPVPPGFTITTEACNDYYVNNESIRAEIIKE
IEEHLATLEKDLNKTLGCNKNPLLVSVRSGAVFSMPGMMDTILNLGLNDNSVVGLAEATQNERFAYDSYR
RFIQMFSDVAMEVPKYKFENVLDRVKEAKGYTVDTELTTDDLKEIVKEFKAIYKKEIKNDFPQDPKEQLM
LAIEAVFRSWNNPRAIVYRKLNDIAHNLGTAVNIQSMVFGNMGETSGTGVAFTRNPATGENKLFGEFLMN
AQGEDVVAGIRTPQNISTLADVMPAVFDEFVKITHILEGHYKDMQDIEFTIENERLYILQTRNGKRTAAA
AINVAVDLVEAGIIDEKEAIMRIEPNQLDQLLHPKFEDKALKEAKVIAKGLPASPGAASGKVYFNADDVV
KANEKGEKVVLVRLETSPEDIEGMVKAEGILTARGGMTSHAAVVARGMGKCCVAGCGEIKVDEFNKEIRA
LDDVVIKEGEYISIDGSTGNVYLGDVKKTEVSLTGNFEKLMNWVDKHKCMMVRTNADNPRDARAAIEFGA
EGIGLCRTEHMFFDEARLPAVREMILSNTVEQREKALEKILPMQREDFVELFKVMDGKPVNIRLLDPPLH
EFLPHDDETIEELSKSMGIKVSDIKKRIVDLDEFNPMLGHRGCRLAITYPEICVMQSKAIIQGAIEAIKA
GVKVSPEIMVPLVGEVNELKIIRKMIVETVDAIIKEEGIEVPYTVGTMIEIPRACLTADEIAQEADFFSF
GTNDLTQMAFGYSRDDAGKFLGQYVDEEILEKDPFQVLDQNGVGKLVKMGAKLGREVKPELKLGICGEHG
GEPSSVEFCYSVGLNYVSCSPFRVPIARLAAAQASIKNPR
>gi|260687650|ref|YP_003218784.1| hypothetical protein CDR20291_2302 [Clostridium difficile R20291]
MLVKNLIIYAVSDSVGETAQQVAKACMSQFYVNETYEIKRFPYMINKGVLLETLENAKAENALIVYTLVD
EELCSIVERYCEREGLSCIDLMTDILREISKRTGRKPKREAGIIRKLDESYFKRVEAIEFAVKYDDGKDP
RGVLQADIILVGISRTSKTPLSMYLANKNIKVANVPLVPEIPIPKEVFEIDTKKIIGLTNSPEKLNEIRT
QRLKALGLSSKANYANLERILQELDYSEEIMKRIGCPVINVSNKAIEETAGIILDIMKENGLKIYKEIEI
>gi|260687651|ref|YP_003218785.1| hypothetical protein CDR20291_2303 [Clostridium difficile R20291]
MIIIQLNERQLKIIDIVKENEPITSESIASSLNVTRATLRSDLAILTMTGILDARPKVGYFYSGVSEINL
IGKSVKEKTVEDIMSMPVLAKKDESIYDVIVTMFLSDVGSIVIIDENEELCGVVSRKDLLKATIGGSDIN
KMPIGMIMTRTPNVVTLTKGASVLLASRKIIEHEVDSIPIVEYKGEDKNHMRVVGRISKTNITKLFLEIV
DN
>gi|260687652|ref|YP_003218786.1| hypothetical protein CDR20291_2304 [Clostridium difficile R20291]
MLDLNRKLAKLEEEGKKIKVALIGAGHMGNGMVSQMANMKGIEASIVVDINLELAHKAFTDAGIDEEIID
NVTNEKDAEIKLQEGKVLTCNDFLVACKTKSIDVVIDATGGIAIGAEIALNSILNKKHIVMLNAETDCVV
GPILKKLADDAGVIFTGSAGDEPGAVMELFDFADAMGFEVRVIGKGKNNKLDLDCNPDTVREEAERKGAS
PHMIASFKEGTKTMVEMALMCNATGFVPDVRGGHGIEATVNEVPKKYALKSEGGVLDNYGVVDFVNGIAP
GVFVVVAHKLKAVNDELKYLSMGDGPNYILYRPYHLCSLETPLSAAMAVLDHKATIVPKAGLVAEVMTIA
KKDLKKGEFMDGYGAYTCYGTIEKYDVAKAMNAVPIGLISKKTKVVKDIKKGEVITYDMVEIEKDTTLYH
LRQLQEKIFG
>gi|260687653|ref|YP_003218787.1| PTS system, IIa component [Clostridium difficile R20291]
MKYEVKISGIGSLVKELMDESNCLIIYDETINDDDLKDISVIHSIATLKSDVEIGDTLTIGNRDYCIVSV
GDIAQKTLREIGHCTIKFDGKCEVNLPGEIHVEIGNPDITIGDLITIS
>gi|260687654|ref|YP_003218788.1| hypothetical protein CDR20291_2306 [Clostridium difficile R20291]
MKLLVILFVAYILNTIFIMKQNKLYFKTLNRAKKKGDIVSTGKKKSYFSKGSIAIISSDSDGFIKFGEIL
KGRTVMAKFKEIEEIEGLDIYSAEQKFKDEESIVQAIKFIKEKINVSFN
>gi|260687655|ref|YP_003218789.1| putative transcription antiterminator [Clostridium difficile R20291]
MKFYVLIWFQICTRMKSRRRYKMSVTEKIPSIDRKIFKILIMCSKKEFVSINSIANELNVTTRSVRTYIK
QLNKDLGNDIAVIKYIKGQGYKLEIKDEQILNKIIDMNRKNVFSLNSKEDRVEFILNYLIELDGFITLDS
LADEMCVGRTTLVNDFQYVEKVLASYNLNLIKKQNTGMKLNGNELDIRLFILNQLYKNSRKDFSNSKYFK
GIKKEEIINLEEKLLTLFKENNFYVTDEMLREVINYIVVLVYRVKEEKKVKDYDVKFDLLKSYDEYFIAR
EIKHIISGMFECTLNDEEIIYLTIPLVSGNAPASECALNSSRISKNIDELMENIFNQIYVDMGIFINEDE
LRVGLGYHLSFTLNRLLFNIKLKNVLLEEIKQNYILPFKLAQIAGKVIEKKYNLEVSEDEIGYIAIHFSG
YLERNSSRFYSIKKIAIICSTGLGTAKLLKIRVEKLIGNNPKIDTLSSFNLRNINLDEYDIVFTTIDLDT
SNINTIVLKINTIFDENKLREQLKTVLCLREGNIDTTNSTNLLINNLLDEDKFMILNEKTILASLEKMMD
HLMDLGCIDDKFRKNIVNREEKSPTVFDKGLLFPHSVNEKSDKFLMAVGILEEPIEYANRSIKIILMTMF
PCENKIDSDLLVKIYEEVLKIGQDVKLTNKISKCRTFLEFKKVLLKNLI
>gi|260687656|ref|YP_003218790.1| PTS system, glucitol/sorbitol-specific IIbc component [Clostridium difficile R20291]
MEENKILKIEKGTSGWGGPLYIKKEGNRNKILSMTAGGIHEVTLKIKELLGCEIVDGFKTGVSDEEVAVV
IIDCGGTARCGVYPKKKIPTINVNPVGKTGPLAKFITEEYYVSDVNPNCISVVDGEDMPQKSQENKSENK
SSIRKPDNYDEVKSKAQGEYAKKNIILSIGQGAGQVVSKFYDAGRDTIQMVMNNVIPFMAFVSMLMGIIL
ASGLGDWIARVISPLAGNIGGLLIISVICTLPFLSPILGPGAVIAQVVGTLVGTQIGLGAIPAYLALPAL
FAINGQAGCDFVPVGLSLGEAEPETVEYGVPALFYSRLITGPIAVIIAYGVAVFALR
>gi|260687657|ref|YP_003218791.1| PTS system, glucitol/sorbitol-specific IIc2 component [Clostridium difficile R20291]
MENVITGLSKGAEWFIGLFQKGGEQFIGLVSGTLPTLIVLMVAINSLIKIIGEERVNNWASKLGKNSFTR
YILLPLVSVFFLGNPMCYTFGRFLKEEHKAGFYDAAVSFVHPITGLFPHANAGELFVWLGISAGLTTLGK
ETTTLALWYFIVGLIVIFIRGIVTEKMYAFLTRKNRATNKA
>gi|260687658|ref|YP_003218792.1| AraC-family transcriptional regulator [Clostridium difficile R20291]
MYIENNLHENITVNDVAKETGYSYYHLTRLFKSMFGESVGSYIKKRRLVSSTKELLYSDKKVIDIAIGSG
FESSEAFSRAFKSIYKVSPIEYRKNRIDVFVGKKKKLELDFMRHLVGNITIKPVIKEIEKIKVIGIKDKV
ILENNSLPDLWEKFRKVHHIVPNTLPSKRVFGICEAISEIHLVSESMEFNEIIGLEVNSYDVIPNSFVSK
TIKEGKYAIFTHTGSLDNLDKTYEYIWGTWFLSSKEELDIRDDFEVYDERFLGPSNVNSQIDIYIPIK
>gi|260687659|ref|YP_003218793.1| hypothetical protein CDR20291_2311 [Clostridium difficile R20291]
MITIRMIKSIIRYIGGVHMETLEVRNIELSGTNYEIGYRLGELVANMPEIIEGQINKSNLVSKKEEKEMI
ELFDKYCPGLNEELQGFADAIQVNCNQILYYTMTYLKPGCSQVALTPELTENGHVLFARNFDFSHNMEDF
VLCKTKVNGKYAHIGTTVMQFGRGEGMNECGLGVSQSSCGIPVGNSDGLRKPAIVGLQFWAVIRYLLENC
KDVDEALEYLKDMPIAYNINLLLADKSGNIALVETLDGKKEVNIINSLESKREYFLHSTNHTHIDKLHKL
EPQSMKNSIHRYKLIKEYINKAKKIGEKELMNLLSLKYPNGLSCNYYNDFFGTLKSIVMDLNIGKFNILW
GGLENKWESYYLKNDIKSITQRININIEKAPSDFFDFIE
>gi|260687660|ref|YP_003218794.1| putative peptidase [Clostridium difficile R20291]
MKERIIQVADSKKEKILGLCQSLYDEPEIALQEYKSAKKISEFLREEGFDVEENLAGMATAFKATKKNGD
GPKIAFIAEYDALPGNGHACGHHLIASMGVGAGIALSSILDTYKGEVSIIGTPAEETGDGKPYLIEHGVF
DGYDAAMMIHPNSKTCVTPEIIAIGGLDFIFTGKASHAGAKPYNGINALDAVVLLYNNINALRQQLVDGT
RIHGIILEAGTAANVIPDMGKVRLEIRAKEQNYFDEVVEKVKNCARGAAIATGCELEFYHFEPTCQGLNE
NKVLVDIFTKIMEEFGIYEDEQVMLGSTDMGNLSQIMPCIHPLMKFSENGEELHTKEFLEASINSYAKDR
VIDGIKILALTGFNLFENPELLKKMKEE
>gi|260687661|ref|YP_003218795.1| sodium/proton-dependent alanine carrier protein [Clostridium difficile R20291]
MTDLVNTINGIVWSPVLVAMCLCIGLYFSMKLRFFQIKDVKEMFTLLLEGDSSHVGISSFQGFATSMAGR
IGTGNIAGVAVAIAMGGPGALVWMCIMATLGSATAFVESTLAQIYKDEHDGQYRGGPPYYFEKGLGWKKC
SILFSVVAIISYTFFMPGTQSNTLYLAMNQAFGFSKMTIAVTSSIALGIIIFGGIKRIGLFAEKVVPIMG
GAYLIMTLVIIIANINLVPGAIMTMFKSAFGFGSVFGGMLGSAISWGVKRGIYSNEAGEGSGTYGAAAAE
VSHPAKQGLVQAFSVYVDTLLICMATGIMIIITGMYNVTDVYTTLPGVEPGPQYVQSAINTLHPQLGDIF
IAIVLLLFTFTTLLAFSYMMETNVSYLVTRIKAEKHEKHIINVCRFMLIICAAMCCFIEPLTSWALGDIC
IGVLTYINLVGIFTLKKPAIKAYYDYQRQKKMGVKRSDRTFNPIELDIRNAEFWENRYLKEDKHELN
>gi|260687662|ref|YP_003218796.1| putative transporter [Clostridium difficile R20291]
MGEKENGIKFGKLMFQLVIIAISWELVYIIPFIQYTLYDPILKALECTNTQLGFLLTIYGLGNIFGAPIG
GWLADRFDYRKIILGSVFLNGVVSFLFAFNMNYPFAVATWVGCAITSLVMNYPSMVKILRVIGKDNQGKV
YGFNEAMVGVSGVVMGAIFLYIYTCFSTPVLGMRWVMISLGILSIVMCPVLWFVIKDVDIREDKEEEASE
KMSAGDFMTVLKSPNTWLVGISIFCVYSFTVTMSYFTPYITSVLGGSVALSGALAIIRQHGLKLFGAPFG
GYCADKVKSPTKVLLPIYVFGIAVIILFLVLPASTPMTIFIALTFVVGILGYMGKGIYYAVQDEVKVPVK
YSATTIGIAAALGFSPDVFQFALIGHWIDTYGNKGYTYTFIFQIAILIIGILSCLYILKVKKKRESKLEA
>gi|260687663|ref|YP_003218797.1| putative aminotransferase [Clostridium difficile R20291]
MKYAKRMDMVKASAIRASQKKIAQKVASGGTVISFAAGLPDPNLFPIEEISEITQKVLNERGKFALAYGP
TKGEDELLDLLVKRMKEEENIDTKAENIIITTGSQQGIALSAMILLEKGDIVVTENPSYLGAINAFRPYE
CDFLGVDTDDEGMVTDDLDKLLSENSNIKVIYVIPTFQNPTGKTWSLQRRKDFMEVVNKYDVIVIEDNPY
GEIRFTPEPLPTLKSLDTKDKVLYLGSFSKVLCPGFRVAWMCGNVDIIDKAELLKQGIDLQSNQFSQVQV
IEFLKKYNLNEHIEKIRAEYKKRCLLMLDAMKKHFPEEAKYTEPDGGMFIWVELPESINVDDLLDKAIDA
GVAYVSGESFFANNGPKNTMRLNYTTMSEEQIVKGVEILAEVIKKELNYACE
>gi|260687664|ref|YP_003218798.1| phosphate butyryltransferase [Clostridium difficile R20291]
MLKDFNNLLEEAKKLEPVIVSVAVAEDKEVLKAVKSATDLNIIKPILVGDKDKIESISREIGLKGHEIIG
CQNPDESVKKAVEIVKNKEAKVLMKGLVNTSVYMRAILNKETGLRTGRLLSLLAVYELPQYHKLLYCTDS
GINVSPNLNQKKDIMTNALLTMKSIGMENPKTAILTANEMVDPKIQSTVDANLLVEMEKSGEIPKCIVEG
PIAFDVAFDAHAAEHKGIKSNIAGDVDLLVFPNIEAGNILGKSWLRFNKAKWAGIVLGATNPIILGSRSD
TAEIKINSIALACLASQ
>gi|260687665|ref|YP_003218799.1| butyrate kinase [Clostridium difficile R20291]
MKVLVINPGGTSTKISVFQDENEILKKNITHTREDLKNFSKVFDEYDYRKQLIVDILSSENHSINSFDAV
VGRGGLMKAIKGGTYTVSEEMIEDMRNEINGEHASNLGALLAKTIADEIGVQSFVVDPVSVDEFDDVSRI
TGISDIEKASWLHALNHKAVSRKIAQKLGGKYEDYNFIVAHLGSGISIVAHKQGKMIDGSGGRSDGPFSP
ERSGGLLAYPLIELCYSGKYTHDEMVAKVSSIGGMYDYLGTKDMIEIENRIKEGDEKAKLIMDAFIYQVA
KEISMYGASLSGNVDRVILTGGISHSEMVVKGVAEKVSYLAPIEIVPGEMEMEALALGALRVLNGEEIAK
TY
>gi|260687666|ref|YP_003218800.1| putative oxidoreductase subunit [Clostridium difficile R20291]
MLNEIICAGFGGQGVLTAGKIIMYVAYKAEKKITWFPSYGNEMRGGSANCNVVVSDEKIANPCVKNPDIL
LGMNSVSVDKYESLMKKNGYMFVNESLVSKDRKYREDINVIKVPVTEIAQNLGNEKAANICMLGAMVKSL
DLFTKEEFESGMCEYFENQGKGKFNSKNVEAFEAGYDYE
>gi|260687667|ref|YP_003218801.1| putative oxidoreductase subunit [Clostridium difficile R20291]
MAKKAPAIMMCENMFCGGCGHSIVDRIIGEVLTEMDICQDTIICSDIGCNHMFQFSMNVDVVVPPHGKMG
AAMAAMKRVRPDKYIFTIAGDGGAYAIGLGETMSAATRNDNVIFLVMNNNMFAMTGGQMAPTTIEGQYTA
STPAGRNYADHGSTFDVVKVMGNLDIAYLARGTITNPKEINTTKRYIKKALEKQKEKKGFCLIEVLVPCP
TNWGLKPVDAMKRIENELVPKYPLGEFID
>gi|260687668|ref|YP_003218802.1| putative oxidoreductase subunit [Clostridium difficile R20291]
MQSLLIKGNEALAEGAIRGGCRFYAGYPITPQSEILEMMAWRQKEVGGVFIQGESEIASVNMVMGASALG
ARAMTSSSGPGFSLKQEGIAYWVSAGLPAVVACVQRYGIGDGFIGAGQDNYWQAVKGGGNGDYHLIVLAP
NSVQENMDMAYESFELAEKYMHPVLILSDATIGQMVEPCIAPPMKEYDMDKAPWAAKGTPVGEKNKVITD
ITYFEDQDTWQKGYIEKMRKVQEDEQRWEEIEIEDAEVVFVAYGISSRIAEGAVRDARAKGMKLGLIRPK
TLWPYPRKAFKKLSDSLKGLVTVEMNMMAQMKEDVIIACDNRFPVYSVATAQYMAEVNQLIDFAQQIIDG
KAKQEEVF
>gi|260687669|ref|YP_003218803.1| putative oxidoreductase ferredoxin subunit [Clostridium difficile R20291]
MEKVKLSVERCKGCYLCIEACKKDAISLSDYTNKKGFVTIKVDEEKCIQCGACYTMCPDLVFEIL
>gi|260687670|ref|YP_003218804.1| IclR-family transcriptional regulator [Clostridium difficile R20291]
MGEIINALDRALDIILLLYHEKREMGITEISKAMGVYKSTVHRTLVTLENKGFVIQNAENGKYWLGINLY
AIGMVVGEKMSLTEIVKPYTKKLNQEFNEVVNVSILEERAQDSPRSIIIHKEYGSNQLLSVNPSVGSSSE
CYCSAVGKCLMAFNDSIDFEKYRKTPIHKYTEHTIDNWDDMMLFLAKIKEQGYAIDDEELEHGLTCIGAP
ILDKNNKAIAAISLSGPTIRMREGDFEYKIKRVIETAKSISELFR
>gi|260687671|ref|YP_003218805.1| putative nitrite/sulphite reductase [Clostridium difficile R20291]
MDNFKKILLNELPNFKEYSSKFLNGEINKMQYKGFSGGYGVYAQRDKKSFMIRLRVSAGVLSQYQLNKIY
EIAIKHNLDKIHLTTRQAIQLHDLSINSIVDIMEEGIKNDIFTRGGGGNYPRNVGLSPLSGVDPSEVFDV
TPYAVATDKYFIKNATTYHLPRKLKVSYSNCYTDTAHCSIQDLGFVATLKNDEPYFRVFLGGGLGKQPKV
ALELDELIKPKDALYCVEGMIKFFMDYGNYENKNRARVRYMVESLGEELFLEKFKEYYKLEKENGSLELN
IEEIDYSKPGVKIDIQDSRLIPQKQDGLYTVYIHPVGGILLTKDLSTLLKELDNVENPMIRLGMTEGLYI
LNLNGNEAKRILEISKTISCNSQLEQSISCIGVPICQMGIQNSQKMLHEIIDYFRLQNNEEILNKAPKLY
ISGCLNSCGVHQVGSIGLCGKKKNVDGISTDAFELFVGGSFEIGKTRLGKSLGDFKASDIPEMLYKISDA
SSGNFYEWVNSNDNILNKITDKYKI
>gi|260687672|ref|YP_003218806.1| glycyl-tRNA synthetase beta chain [Clostridium difficile R20291]
MKNYLLFEIGVEEMPSRFVGSTLEQLKNNLSKLFDENRIAFDKINAYGTPRRLTLVVEGLSDRQSDLEEE
IKGPAKKIAVDAENNLTKPALGFIKSKGLSESDIYFKQVGKEEYIFATIKQDGKETSEVLKDILPETIKS
VVFPKAMRWGGKNLKFARPIRWIVALLNDKVLEFDLEGIISSNVTKGHRFLGESTIEVDSIEDYFEKLEK
NYIVLDQNKRKEMIRKQCIEVANSLGGEVEFDEDLLEEVTYLVEYPTAFYGEFDVDYIKLPKEVVITPMK
QHQRYFPVLKEGKLLPNFIAVRNGDSYRIDNVKAGNEKVLEARLADALFFYREDTKRNLESYIEKLKTVV
FQVKLGTIYDKTLRLEKLSADILDSLGLVDEKADTIRAAKLSKADLVTGMVGEFDELQGFMGKEYAKVGG
ENDVVSEAIFEHYLPRFAGDILPKTNAGVALSIADKLDSIAGFFAIGIQPTGSQDPYALRRQALGILSIL
MDRKVAVDIKVLIEHALDNYSELDFNKEEVVEQIMNFFNERVKNLFKDLGIRYDVVDAVLSSDINDVSDM
HMRALELNNWLEKDELVEMLTAFNRVSTLAQKAESDKIDESLLKEDAEIRLYNEFKQVKVKVNELLKDKK
YGIALDEFASLRPVVDNLFDTVMVMDNDEAIKNNRLALLKQVYDTMLEICDLSKIVYK
>gi|260687673|ref|YP_003218807.1| glycyl-tRNA synthetase alpha chain [Clostridium difficile R20291]
MNFQEMILALQKYWSKQGCIMMQPYDIEKGAGTMNPNTFLRSLGPEPWQVCYVEPSRRPADGRYGENPNR
LYQHHQFQVILKPSPDNIQELYLESLKEIGIDPSEHDIRFVEDNWEAATVGAWGLGWEVWLDGMEITQFT
YFQQVGNIECELETGEITYGLERLAMYIQEVDSVYDLKWNDKITYGEVFNKAEYENSMYAFELCDADMLF
NLFDIYEKEALRLMENGLVIPSYDYVLKCSHAFNTLDARGAIGVSQRASFIGRVRNMAKTVAETFVKQRE
EMGFPLLKDGDK
>gi|260687674|ref|YP_003218808.1| hypothetical protein CDR20291_2326 [Clostridium difficile R20291]
MSSNITIEMVDSVFERVPGATYAEAKEALVMCNGDVIEAVIYLENKKNTCNCKAKSAKETMEEVFGKDGE
NIKFQLKELLRKSSVVRIIVEKDGKTMMNIPLTVGVVGLAFVPLATLVGLSAAVISKYRIKVQNEEDGEI
VDLGELNEEKLHVLKNMITNAAKDVKDVVVDKKEDDKDVTADLMKEESEKNKEDEDENK
>gi|260687675|ref|YP_003218809.1| DNA repair protein [Clostridium difficile R20291]
MIILNTQGIVLKAIRYKESDIILTLFTRKLGKVSAIAKGAKKNKSSLLSSSQLFSYSNFTLKKQGNMYKV
TQSEIIKSFYNISYDIEAFSYATYITKLVENSILENQTNNRLFILLAQTLYLYTQDNTDNRFITAAFELK
FLDYIGFKPIVNKCINCECKILQNSVFNIYEGGILCSKCSKLFDNNIKLDLTTISLMEYVLRNDILTCSK
AKVSKYITHELENILDKYLKVYVDNINFKSLHVLQSVKNNKGVDNDE
>gi|260687676|ref|YP_003218810.1| putative Mg2+ transporter [Clostridium difficile R20291]
MDRKLDASQDLLYEVKSLIDNNKVLELRELIEEYHIIDIFDIMENLEEDMKIQLFEVLPLDMASSILEEG
SVEFFISILSKLDVEHSKNILELMSLGDMADKLSELEEEEREHIINLLNQENADYVKELLFYDEDSAGGT
MTTGYISINKDMTALEAIDHMREEAEEAETIYYIYVVDDEEKLVGVLSLRELIIARDANIVEDLMSENII
SVYVDEDREEAVRLVSKYNLIAIPVVDRQEKLKGIITVDDIIDVMEEEATEDMYKFAGSSEHEREVAEKE
NPTLREQIISALRGRLPWLIITLVGGLLASLILSNLDYIMNPVYAPLVFFIPVVIGMGGNIGTQSSSVTV
ITLSNKDLNFSNVVREGIVGIITGLLCSIITGIVIYFVMRKLDIVLIVSISLFINMVLGATIGAFMPVLL
KKMDADPSTVSSPIISTALDITGIAVYFIITTALLSKIV
>gi|260687677|ref|YP_003218811.1| GTP-binding protein [Clostridium difficile R20291]
MFKSGFVSIVGRPNVGKSTLMNNVVGEKIAIMSDKPQTTRNTIQAVYTDEEMQIVFLDTPGIHKPKNKLG
EFMVKAATEAFKNVDLILFVVDDSKKIGPGDRKIIEDLRSVKTPIILVVNKIDQLDQKDELFDIIKMYDR
EGIFKEIVPISALKGKNTDTLIKVIQNYLEEGPKYFPDYMITDQPERVLIAELIREKVLHYLNDEIPHGV
AVEIEKMKARNDKEIVDVSAVIYCERDSHKGIIIGKNGRKLKGIGKSARQDIELLLGSQINLQLWVKVKE
NWRNLQNYINNFGYNDK
>gi|260687678|ref|YP_003218812.1| cytidine deaminase [Clostridium difficile R20291]
MDNIELLRLAEDARQHSYAPYSGFRVGAALLTKSGKVYTGCNIECASLGGTNCAERTAIFKAISEGDKDI
YKIAIASDNSENNEQTYPCGICRQVIIEFGSDIKIITGYTKGEVFEHSIKDLLPNYFSGNDLK
>gi|260687679|ref|YP_003218813.1| putative membrane-associated kinase and phosphatase [Clostridium difficile R20291]
MKPEKTRQGIIKAFNAAIEGILYTFKFERNMKIHYLGSVAVLIISLFFNFSKLEMIMLLMSICLVVVAEM
FNTAIEKAVDLVTDEYHVLAKIAKDVAAGGVLVAALNSVVVGYILFYDKLTDISGILIYKIRESELHITL
ICILLVLIAVVVVKALTSTGTPLKGGMPSGHAALAFAIATAITLMTERVVASTLAYIMAVLVAQSRIEGK
IHTFWETIAGALLGVLIAILVFQLGMFYN
>gi|260687680|ref|YP_003218814.1| hypothetical protein CDR20291_2332 [Clostridium difficile R20291]
MDLILDDRQDKLEVSEELIEKIKDIIIECLDYEGYDDNYEVSLSFVDNKEIHELNREYRGVDRVTDVLSF
PLLSDDFEDVELEEESLGDIVVSLERALEQSIEYNHSFEREVCFLICHSMFHLLGYDHDTDENTKEMREK
EEHILNKLNITRE
>gi|260687681|ref|YP_003218815.1| PhoH-like protein [Clostridium difficile R20291]
MIIQKKFTIADGNFERELFGNFDENVKLIEKTLNIDVILREGNIILIGEEKNVDSALKLMNELHQTVSNG
KHLDKQSISYSLSLLLEGSEQKIKELEGTIVITQRGKAVQPKTLGQKEYIKLIENNDITFGVGPAGTGKT
YLAVAMAVKAFKRDEVSRIILTRPAVEAGESLGFLPGDLKDKVDPYLRPLYDALFEMLGADKFNKYLERG
TIEVAPLAFMRGRTLDNSFIILDEAQNTTSEQMKMFLTRLGFGSKAVVTGDVTQTDLPQNKKSGLIQATE
ILKGVPGIGSIMLTDRDVVRHELVQRIIRAYEKHDKREEFKKEERKKVKMQEKTFKRK
>gi|260687682|ref|YP_003218816.1| putative stage IV sporulation protein [Clostridium difficile R20291]
MEGVGLEQFLNHLIRNGISVYNVTRIKNTKMEFHIDRQDIKEFKNVYRGSKFDIKVKQKTGVPFIIKRVY
KHKGMWICALVSLFLLMSTSQFVTDVYIQSPEGIKKEALRNELYKVGVRPGVYKKSIDRKEVRDHMMSKF
NDVAYLSINVKGTNIFVTVTKKAESLKSTDQSNYCNVIALKNGIIEKVIPRSGKSVIKSGDIVQKGDVLL
NGANTKSIPEVWASTFYESTKKASYVDTVNKKTGEKKNIYTLSFYDKEFTMRKNIKYKDYVVENKEKKLS
IGNYTFPIKIKTSTFYETKKVEVKRNKEELKKELSEKALKELEYIIPASARIIDVKHNFKVNKNMLEYLI
TVQTSENIAKIYPLSKSEAERFIKEESKPDEGEEEVPSNPEKRPLNDIRNEFDEDNKDNKDQNNSDENNS
NQNSNNSQNNNSNNN
>gi|260687683|ref|YP_003218817.1| hypothetical protein CDR20291_2335 [Clostridium difficile R20291]
MLMLEISTDLQVNQPVITVTSNTFISIENYLSILEYEVDLIRIKTKVKTIKISGDKLSLKYITDSEIGIK
GIIYNVEYVD
>gi|260687684|ref|YP_003218818.1| putative sigma 54 modulation protein [Clostridium difficile R20291]
MQIIVSGRQMKLTDGIKGYVDGKLSRLEKYLDPESEVKVTVSAKKDRQKVEVTIIPINGQIIRAEDVEDD
LYAAIDIVCDKLSRQVVKYKTKVKDKVQNNKSIRFENLDFIDNSSEFDDYDYDDEEDENIVIERRKKFNV
KPMSSEEAILQMELVGHNFYMFRNQDNFEINIVYKRKAGGYGLIEQD
>gi|260687685|ref|YP_003218819.1| probale sensory protein [Clostridium difficile R20291]
MIISVKEIRNFLINIFIPLIIGYLSSILTMIISGTDISTYYLQLTKPSFAPPAFIFPIVWTILYILMGIS
SYLILRKGYNLPKVRDAIFYYGLQLVLNFIWSILFFGFGLRFTALIDIIIMILVSIIMISKFSKIDKRSG
YINLIYLMWLVYAGFLNYFIWFINK
>gi|260687686|ref|YP_003218820.1| putative tRNA binding protein [Clostridium difficile R20291]
MSLKQKLQEDLKSSMKNKDTVRKSVVTLIRASIKQYEVDNRVELDEDGIIDVIAKQLKQRRDALVEFEKA
GREDLIKETEGEIEVLKEYLPQQLSEEELEEIVKSTISEVGATSMKDMGKIMSVIQPKVKGRADGKLINK
LVKQNLQ
>gi|260687687|ref|YP_003218821.1| 30S ribosomal protein S21 [Clostridium difficile R20291]
MSEVRVRENETLDSALRRFKRQCAMSGIMSEVRKREHYDKPSVKRKKKAEAARRKNAKK
>gi|260687688|ref|YP_003218822.1| histidine triad nucleotide-binding protein [Clostridium difficile R20291]
MDCIFCKIANGEIPSTKVYEDDRVLAFNDLNPVAPYHILVVPKKHYDSLIDIPDKEMDIVSHIHVVINKI
AKEKGFDQTGFRVINNCGSDGGQEVKHLHYHILAGKKLPNYEAGQN
>gi|260687689|ref|YP_003218823.1| putative radical SAM superfamily protein [Clostridium difficile R20291]
MKKVAFYTLGCKVNQYETEAMLELFEKDGYEQVNSEEYADVYVINTCTVTHMSDRKSRQYIRRVKKKNPD
AIIAVVGCYSQVSPEEILDIEEVNLVMGTNDRRKIVEEIKKINSSKKVSTVDDIMKVKAFEEIEISQTNG
KTRAFMKIQDGCDRFCTYCIIPYARGRVRSRDIDSIVDEVKKLANNGYKEVVLTGIHVASYGKDLKDRDI
KLLDVIKQINQIEKIERIRLSSVEPILFTDEFVNEVLKMDKVCPHYHLSLQSGCDETLKRMNRRYTTLEY
KTIVDRLRSKMPDVAITTDVIVGFPGETNEEFKKTYEFLKEIELSQMHIFKYSPRKGTPAATMENQVDPQ
MKHFRSEQLLNLSKVNFNKFATKFIGRELDVLFEQNIEGNKYEGLTSNYIRVVVESDKNIQGQILKVKIN
DVKDEYVEGILL
>gi|260687690|ref|YP_003218824.1| hypothetical protein CDR20291_2342 [Clostridium difficile R20291]
MDRFFVEKNNINLQDKTCTIEGEDVKHISKVLRCKLGEKLEICDKNNNEYICEIMNIDKSIVNLEILEKV
DINRESELKVRLYQGLPKAPKMEMILQKLTEVGVEEIILVQTKRSVVKVDDKKEDKKFERWERIIYEAAK
QSKRGKIPKLRGVLSFKEALEDMKKNNVNICPYENERTVSIKHALKKCDSNIDSVGIFIGPEGGFSEEEI
EQIQKNNCNVVSLGPRILRTETASVVASTIALYELSDLGGEK
>gi|260687691|ref|YP_003218825.1| putative ribosomal protein L11 methyltransferase [Clostridium difficile R20291]
MNNWIEVTIKTTTEAVEPITNILYEQGAGGAVIEDPKDFLFQKKNELDWDYVEEEVFKKNEEDDVLIKTY
VSEEKNVMEFVEIIKQKVLGLKDFGIDIGEGSVSLDQVNEADWANAWKAYYKPTKVGQRVVVKPTWEDYA
MQDGDLIIELDPGMAFGTGTHETTSMCIRELEKYVNKDSKVFDIGCGSGILAIAAAKLGAKEVVAVDLDE
VAVKVAKENVLENKVEKSVSVMHGNLTDVIKDKADVIVANIIADIIKILAKDVQNFMKEDAIFISSGIIL
DKVEEVKESLIENGFEIVEVQKLGEWSAIVSKLKK
>gi|260687692|ref|YP_003218826.1| putative ATP-dependent helicase [Clostridium difficile R20291]
MKNIMQKEILAKSYNLRTNQQEQTLVEHIKDLFEVLESILELNLYSDKDVEILKICCALHDLGKINSIMQ
QKMEINNKISYSCSEEERKKLESDKKSLKKIARHNIFSGAFLKDILEKMNLLEEDKLYIYKSIMLHHGNY
EDYMRLSTSKVQEEIYDYIEKGILEKEEFNLKDIESYINDILNVDFKFGEDVLDYDYIDKLSESMFIDSD
YNNGQIDDSVLNYRKFKYILYKGMLNLIDHSASSRQKGIKFYNDFTDEEIDDMILNEIYKSQGNLEKNNI
EFNTIQKRLRELSGRNVLTVAFTGSGKTAADYRKTFKRKFFLVPNKISAESFYRKNIFQNKNDLDTRSSN
DYIGLLHGDINLYSENEDNGEHDFVLTLRDIDLSINFCKPCVIATVDQLLLSMFKFPGYEKIFAAVKNAS
ITVDEVHLLEPKMFLILIYFMQFACKYLDVDFHLMTATLPKSYKEQMINKGIIFQEESNENVTDKGEIVF
IESNKEEEICEGKDVKVSFIKEKEIKSIVEGALENKQKILIIKNTIDSVNRTYEFLKENLSDKYGGVDID
VLHSRFKFKDKKEKYSKILNGEGDIWISTQSVEISLDLDFNIIISDLATMDSLIQRMGRCNRNNKYEYGN
FYILPSEDKIYDNKLKNTTKNILKDILKTNSIFTMGIRKTILDDYYDNSVVKNYFEENFISCDKEIKNIY
GINKEIFDGLDLIFNFEPYKNIVDSKKEAAKIFRDVDVSYKIILEEDFYKEDRELQQDSIQVSGFIFNRL
YYYGLISKVEGYMVLKSSSKFEYNSTVGLILK
>gi|260687693|ref|YP_003218827.1| hypothetical protein CDR20291_2345 [Clostridium difficile R20291]
MKVLQCKLKQPTAHYRDPKVFQNEYISTLNLPSKTTIMGMITYLCDRRLNSDIDIGIIGTHHHRELEFSR
GENIDFWNEYTNMRKGKDKEKFLLQGNYYDYYKEHKAQNSILNYEVLKEVELTIFISCKDDEELEFIKKK
LESPCKYANLGRKEDFVIPSEKGCFVKEVELKEVMPMNTRDAIKENIKLKNTYVRVDLRDKENVETIINQ
GVLIALPYKYKDLEANRDDRVYEFCHYIYVDNDGIYPKNIKVNVCNVCIDTKEVFTWL
>gi|260687694|ref|YP_003218828.1| hypothetical protein CDR20291_2346 [Clostridium difficile R20291]
MNEKRVKGVTLTILTESPVPLSYDQGYGNYTPIKKEQYREKIHAKTSIATITYDLRRMLHQEYGWNLSNI
IFGKKGNIYPSIKQNVGCVDENGLETDVFGYLIPLKDKGSISKASPLRIIPFRSLNSYRGSTQLITNRGF
LSSEFGRKYYDEKEENEVLRDENFPTSQALAIEETLSDYYVYTITLELDRIGVVEVEDGKLLLPEERKFM
SKELREKAVKDILDAITVFTRNIKHSSVLLKPLAVMGGAFDKVVPFFWDDVDYNADSGEINLEGVIETIE
SYSLKESNTILAINDKLKISNKKELNKFNLSKYPVKEIKNLADRLEIGEDNMWYLKE
>gi|260687695|ref|YP_003218829.1| hypothetical protein CDR20291_2347 [Clostridium difficile R20291]
MREIKAKFYRSGDIVRDIGIVYFYELLMDLKNELEKNDYKLKFTCELNRNYLSLESAEYIDPKYISDYIL
ENQLFKVFKNGKKETLEKIFSNIDNLTYVNFIEELDKSSATEKQKEGIKKDFKNRRFPYVRNSGKYGLNT
SLENMETNVKRIVDTVIKSNIEIDEIDKLDLTQYEEKDSVCNVCNINKTTKLDIDLRERKDSKYNFLFRG
AEKSGFKRSGQVESNICFECEFFNLMCLLYINLKRPMVFAYTNDLRELAFLNHKIMLKRKMYSDKSFYKK
LLHEKISSIRLYRFDIDTNKGIILKFDSIIEYKELLKKIELIDIIDNYNFSREPGNTRNLGKKMIDNGNL
SNLKELLLDNISVLRQLTGTSREMDFVSSSYNIGLYIKLCWIVDGGEEYKMKNYMESNLIYSRVGKDLFN
KMTDESRRKNFSMKVIQLLKSNDRTQLFQTIMHVLVSNGILIGEGFVEGLMQSSELELNTNVGLFIQEIM
K
>gi|260687696|ref|YP_003218830.1| hypothetical protein CDR20291_2348 [Clostridium difficile R20291]
MSRISIFMESCNGKFPNENSMLSVSFIKNILNAENKDFAKNIFNYGEERKNNKQIKDINTAIYIPNLIRS
KNELLVDGDIIFNISFYNYSMFSKLYNGILKVKELEYKGYRFKIKNIKIHKEHEIKENGVIFKTMSPIIV
KNKEGKYLDVEDSNYIECLNYIANLTLESIRGSGLRKPLEFIPLNFKKRVLKEKIRGFKVREYYYINAYA
GTFFLKGNMEDLNALYKMGIGYRRTENAGMVDILK
>gi|260687697|ref|YP_003218831.1| ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MSEVILKNISKLYSNGFNAVKNINIDIKDKEFIVLVGPSGCGKSTTLRMIAGLEEISEGELYIGDKLVND
IEPKDRDIAMVFQNYALYPHLSVYENMAFALKLRKLPKDEIDKKVKEAAKILDLLPLLNKKPKTLSGGQR
QRVALGRAIVRNPKVFLMDEPLSNLDAKLRTAMRTEITKLHQQLGTTFIYVTHDQVEAMTMADRIVVMKD
GVVQQIATPQDVYDYPANIFVAGFIGAPQMNFIDVILIEENDKIYAQNEHIKLKLNKEKHYDLIKDNYIN
NEVVIGIRPEDIHVEDTFIKSNPDTCFKSRIEIKELMGAETYAHLKLGENTITIRFDSKNRINVGDDLTL
SVDNSRVHIFDKETTLAIR
>gi|260687698|ref|YP_003218832.1| hypothetical protein CDR20291_2350 [Clostridium difficile R20291]
MEELKDFLERQLNKKINIYPYENQKLDASSHLVTFNNAIYVIDFLDKNNLDNLKGNFYLIYQSHIDFEYL
KNIFYNLFEDINIIQHNGFFIVNSKYNLDINVTTQNIIETETYQSTYIFYLGELDSKADFYFRLQLCSDL
LPHIIKDNAENKFLNLFDLIRYKTLDLINEDNILNKLIDFNKIKSIDEELLYTGIKFINNDLNISKTSTS
MFLHRNTLVYRLEKINEILGFDLKNFENAMIFYLSVKSYFLYKKI
>gi|260687699|ref|YP_003218833.1| putative transporter [Clostridium difficile R20291]
MGKTNARRTLFLIAIGSGTMLNPLNSSMISLALHSIQNDFHISFTTVSWIVSAFYLASAIAQPVSGKIGD
LIGRKVLFLSGLMLVILSASIVPLVQSFFILIFIRVIQAIGTSTLYPSGVALIQNNIKERQSSALAVLTI
FASTTAGLGPTLGGLLLDLGGWHAIFLVNIPVVLVSICLGYFLFPKEVKEKKSIKETLKNVLSRLDIIGI
LLFSIAMIFILLFLLSMKESFNLEQLVFGIILMCLFIWHELRTKLPFIDIKLFVSNPKLSKVYLQFIILN
FFNYILFFGLPSYFQDALHYSAKSTGLFMLFMSGIGIFISPLTGKWIDKSGTRFPLVTSSIFMFISAVLL
SVVFIHIPVIGKGIILSLAGISYGVGNVALQSSMFEESPRDSIGTASGLFQTSRYLGSILATVLLGMVFE
GNITSEQFQILGYVMVVLGTISFLLNFILKKELRKVE
>gi|260687700|ref|YP_003218834.1| glucokinase [Clostridium difficile R20291]
MYYIGVDIGGTGIQAGVVDNYGKIIFRSECKTVIEKGFEGILNDIKIMIYKLLEDNKLTMSDIKSIGFGV
PGFINKEGLVTCVNLKWNKKAFNKELKRRFPDAEIHGENDATVAALGEAKFGSMKGANVGVLYTLGTGVG
GGIVINQKVFSGAHGLGSEIGHQIIGENYFNCNCGNNGCVETFCSATAIIKYSQKLIEEGEKSRILDLAE
GNLENVNAKMVFDAYRENDLVAIKVINRFKDYLAKTFANTINSLDPEIISIGGGISKSSDIILDGIEDLV
RKFVLYKTEDIATITCATLGSDAGIIGAAFL
>gi|260687701|ref|YP_003218835.1| chaperone protein [Clostridium difficile R20291]
MSTKRDYYEVLGISKDAEAQEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEINEAYEVLSDDTKRKTYDQF
GHDGLNGQGGFGGQGGFGGQGFGGFEDMFGDIFGDMFGGSFGGGRARRRGPQRGADIRQSVTISFEEAAF
GKKMSIKVNRSEECEECNGTGAKPGTSKKTCSTCNGTGQVRTVQRTPFGNIASSRPCSACNGTGEVIESP
CSKCHGTGNTRKVKTIEVDIPAGIDDGQMIKLSGQGEVGEKGAPRGDLYIVVNVKSHPLFTRDGNDIYFE
MPITFVQATLGDEIEVPTLDGKVKYSVPEGTQTGTVFRLKEKGIPRIRGNSRGDQYVKVVVEIPKKLNDK
QKELLREFAKECGSNVHEKKKTFGQKIEDMFKKK
>gi|260687702|ref|YP_003218836.1| chaperone protein [Clostridium difficile R20291]
MGKIIGIDLGTTNSCVAVLEGGEAQIIANSEGMRTTPSVVAFTKDGERIVGEPAKRQAVTNADKTITSIK
THMGTDYKVNIDGKSYTPQEISAIILQKLKSDAESYLGQTVTEAVITVPAYFTDAQRQATKDAGRIAGLD
VKRIINEPTAAALAYGMDKLDQEKKILVFDLGGGTFDVSILEIGDGTFEVLATAGNNRLGGDDFDQIVID
YLADEFKKAEGVDLRNDKMALQRLKEAAEKAKKELSSTMSSNINLPFITATAEGPKHLNIDLSRAKFEEL
TRGLVEKTMEPTKTALQDAGLSTGDIDDVLLVGGSTRIPAVQEAVKKFIGKEPHKGINPDECVAAGASIQ
AGVLAGDVKDLLLLDVTPLSLGIETMGNVMTKIIERNTTIPTKKSQIFSTAADNQTAVDIHVLQGERSMA
YDNTTLGRFQLTDIPPAQRGIPQIEVTFDIDANGIVNVSAKDLGTGKEQKITITSNTNLSEAEIEQKIKE
AEMNAEADKQKKEKIEAFNQAESTIYQTEKTLNELGDKISSGEKEDIEKAIADLKAVKDNQDATAEELKK
ATDEVMTKFQKVSQEMYQKAAQEQQAAQGAEQAQDNGPKDDNVVDADFKEVDEDK
>gi|260687703|ref|YP_003218837.1| heat shock protein [Clostridium difficile R20291]
MDKKNEQQEVREENDTSINQESETQVELEEEVVNEECETSSEKTDEKEVDDENVTDINSKLAEKKLQDEL
DELNDKYQRLQAEYANYRRRTQQEKETIGVFANEKIITELIPVIDSMERALDACEDKEDTMYKGISLVHK
QLIDTLVKFGVEEIEAESKEFDPNLHLAVMQESVDGVEANQIVMVLQKGYKLGTKVVRPSMVKVSC
>gi|260687704|ref|YP_003218838.1| heat-inducible transcription repressor [Clostridium difficile R20291]
MLTARRYNNMELNERKLNILKAIVKDYIETAEAIGSRTISKRHDLGVSAATIRNEMADLEELGYLIQPHT
SAGRVPSEKGYKLYVNSLMSKSELDDNDKILIEQCMNHNINHIKELIHETSKLLSQLTNYTTVAVTKSLI
NQSVIKHIQLVAMNDNNILLIVVTDKGDLKKANLTTNVYLDQSKLNLISDNLTRKLLGKSITDLDDNLIA
FIKYEISEYSGLIDELLNALNSNMKEEDFSLSLNGATNIFSYPEFNDVLKAKSFLNMLEKKETIADIIKS
KGIQKDNLNIIIGSDNDCELAQDCSIVTATYNVDRDLVGRISFIGPTRMDYARIYSIINYMSLLINRK
>gi|260687705|ref|YP_003218839.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium difficile R20291]
MLGLYVHIPFCVKKCKYCDFNSYKMDIDSKKRYIEDLKIEMKLYSNKLYKDNKYKNKECCSLNKNDKITS
IFVGGGTPSILTSDEIREVFISIKEMFDIDENAEITIECNPGTLTLEKLKTMKEIGINRLSIGLQAIQEK
HLNFIGRIHTYEEFEKNYKDALSVGFKNINVDLMYSLPNQTLCDWKETLEKVVHLNPTHISAYSLILEEG
TELYNMYESNKFELIDENVDIEMYEYTINYLKSKGYNQYEISNYSKEGYNCEHNILYWECEHYIGIGAGA
SGYINENRYNNVESLEDYHLSLVKREKPIQENEILSEKDMIEEKIFMGLRMNKGIKFEDFKKKFGIDFRE
KYNKQIEMLLARKLINQSFEGIQLTQKGREISNSVFIEFME
>gi|260687706|ref|YP_003218840.1| amino acid transporter [Clostridium difficile R20291]
MHTQLQKTIGLSAALSTVVGMVIGSGVFFKPQAIYTTTNGAPGLGIIAWLLGGFITITAGLTATEISAAI
PKTGGMMIYIEEIYGEKLGFLTGWMQTVLFFPGTSAALGVIFAQQASELLGMSPNNMANVLPIAIGVILF
LALLNIIGSSLGGKVQTVATIGKMIPLILIIVFGFIKGQSSEVLNPFVGDGVNASNALGQVLIATLFAYD
GWINVGAISGEMKSPEKDLPRAIVGGLSLVMAVYIIINIAYLWVVPASELATVTSPATLVATRLFGNIGG
KVITVGILISVFGTLNGYLLTGSRIPYTLAEMGTLPASKTLLKVNSGGSPVNSILLITVLACVYALSGQF
NLLTDLTIFSIWVFYVLTFIGVMRLRRQKPDLHRPYKVPLYPIIPIIAILGGLFVIINQILTSTIISLGG
IFITLLGLPVYYYMKKR
>gi|260687707|ref|YP_003218841.1| putative poly(A) polymerase [Clostridium difficile R20291]
MWYILSKLIENISKNILKKNKKVIFMINIEIPKKVDYIIKELETNGYEAYVVGGCVRDCLLERVPNDWDI
TTSARPEVVVELFEKTIPTGIQHGTVTVMIEHEPFEVTTYRIDGNYSDGRHPDSIEFTNNIVKDLSRRDF
TINSIAYNSKTGLVDPFNGYEDIQNKYIRCVGNPVDRFEEDALRMLRAVRFSAQLNFKIAEGTKQSIHKK
ADLIKNVSIERIQTEFNKILVSDSSKLNLLKSTGLLKFIIPEICELEDVTQHNPYHIYDVQKHTLISTEV
IEDELYLKLTMLFHDLGKKVTKTTDKNGVDHFYTHSRESVKIAKKILRRLKYDNYTINKVLILIQYHDYR
IEPKRKIIKKLLNKLEDVELFEDLIKVNWADTLAKNPKYAKQKILNLIECEKEFKHIINQKECFNLKDLA
INGKDLISIGIKPGKDIGHILNKMLEIVINNPELNEKEILKEKALNIYTF
>gi|260687708|ref|YP_003218842.1| GTP-binding elongation factor [Clostridium difficile R20291]
MDNKQSRTRNFSIIAHIDHGKSTLADRLIQQTGLVSERDMKSQLLDNMDLERERGITIKLQNIRLMYKAK
DGNEYYLNLIDTPGHVDFNYEVSRSLAACEGALLVVDAAQGVEAQTLANVYLAIDQDLEILPIINKIDLP
SARPEEVKNEIEDLIGLDSSEAPLISAKTGLNIEDVLEDIVKNVPPPKGDNEAPLKALIFDSYYDAYKGV
VAYVRVFEGTVKKGMTIKMMNTNKKFEVTEVGVMAPGQTELSELSAGDVGYIAASIKDIRSCRVGDTITD
SNNPTEEPLPGYKKATPMVYCGIYPGEGEKYENVRDALEKLQVNDAALEYEAETSAALGFGFRCGFLGLL
HMEIMQERLEREFNLDIITTAPSVIYRVTKMDGEVVMIQNPANLPEPSEIKMIEEPIVKGDIIVPKDYVG
VVMELCQERRGNMLNMEYIDERRVMLHYDLPLNEVVYDFFDALKSRTRGYGSLDYEVKGYVASTLVKLDI
LINKEQVDALSFIVHETRAFPRGKAMCEKLKGEIPRHQFAIPIQAAVGNKVIARETISALRKDVLAKCYG
GDISRKKKLLEKQKEGKKRMRQIGSVEVPQKAFMSVLKLDE
>gi|260687709|ref|YP_003218843.1| hypothetical protein CDR20291_2361 [Clostridium difficile R20291]
MSRLEKNIESKSKLRKYKYIMRILFLITMIIGTSVCVFIVDSNAKSMLGMKQYDFPSIKFDITKFDFDIP
NFDIHEIIKKFNK
>gi|260687710|ref|YP_003218844.1| putative stage II sporulation protein P [Clostridium difficile R20291]
MFKKCIKVVTLTFILACILPGKSLALNQDDFLKFLVNSSYPEAKVEGNDTENKKNNKNKETSKENKEESK
EENTKSKDASKVDNKKESEKEYIKLYVGKENVPDIESKNSDTTETNTTSSSDYKDDLRVTKENPRILIYH
THGCETYSNSPDGNYHSRDKKNSVMEVGSALTSALDSKGWGVVHTTKYHDYPSYNNSYASSLKTIQSILP
KYNSVDIAIDLHRDARDLTNPATKEKDHLKYTTMINGERVSKFFFVVGGKNTNRKQLRALAEDITAFAEK
KYPGLVSPIVEKDYARFNQFAVKNHMLVEIGNNATSVEESKATTKYLAEILDEYFKQKN
>gi|260687711|ref|YP_003218845.1| germination protease [Clostridium difficile R20291]
MINVRTDLALEASEMCEKSQEGSSIPGVKIETKELENCIVTKVEVIDRQGAEIMNKDIGKYITLESNLMK
FDDDESREEMISYLKEELVDIFGQDKNKKTLVIGLGNRNITSDALGPKSVSKTLVTRHLFKNYNKDYDDD
FTEVSALSPGVMGVTGIETSEIVKSLVEKVKPDRVVAIDALASRKMERVNSTIQISTAGISPGGGVGNTR
KSLTKETLGVDVIAIGVPTVVDAATLTIDVLDMAIDNLIAQSEETESFYEMLKKLKEEEKYHLIKDSLDP
YDKNLIVTPKDIDDTIENLSIIISEGLNRSLHPGRLV
>gi|260687712|ref|YP_003218846.1| hypothetical protein CDR20291_2364 [Clostridium difficile R20291]
MKFHEFGDKNKPHIMLIHGGGNAWWNYLRQAEVLSNNYHVILPTLDGHGEEYETTYISTEDTADKLISYI
DENCSGHLFALCGVSLGGQIVMELLSRKPNITKKAIIDGSICYPRPLMARFCIAGIRFFGGLLFSEKACR
FQIAMMPKLLPENMQYPDEIKAYYMTDMPHVRKETFYNMYRTYMMNYTLKENVKKTTAQVMYWYGEKEMK
CVKKSAKMFQSYVPSCEIYEAKGYNHGYLSLYLPNEWLEIAEPFFQKE
>gi|260687713|ref|YP_003218847.1| hypothetical protein CDR20291_2365 [Clostridium difficile R20291]
MDIAKLILNPARLRILQYIRLHGSARTSDIVKYLNDIPRATVYHHVKILEENNMIEVIKENRVRGTIEKV
YALKEYTTSMEGETFVALSTAFYVGLMQEMNEYFSRKEQDHKKDNVFFSSALLYMSDNEYENLLKSIADL
LKPYIEQKPKSNLKLRKLSIISSPPVVDNDKTK
>gi|260687714|ref|YP_003218848.1| 30S ribosomal protein S20 [Clostridium difficile R20291]
MANIKSAKKRISVIEKKTALNRVRKSQIKTAIRRFEDAVAAGNREDAVAKFQYAQKRIYQVASKGTIHKN
AAARKVAKLAQKLNGMNA
>gi|260687715|ref|YP_003218849.1| hypothetical protein CDR20291_2367 [Clostridium difficile R20291]
MYLFYGREYYLIENAIKAFKDSLNEGMLDFNLDIIDGKEIVLNQLISSIETLPFMDDRKIVIIKDFELLK
GKKKNFTDSDEKYLIEHLDNIPDTTTIVFVVYGDVDKRKSLVKKIGNNGIVFDCDKLSDMDLFKWIKKSF
ALNDVIIDNSQIMYFIEQEGYRDKSSEKTLSDLENEINKISSFVGKGNNVTNDVIDKLSQKKVENDIFKL
IDYIGEQNASNAMKILNDMIQEGESVLGIFSMIARQFKIIMQVRQLQLDGYSTKLIADKLKMHQFVVGKA
LKQTKNFSDDIIVEILNYILESDYKIKTGLIRDTLAVEMLVSRYCKREAI
>gi|260687716|ref|YP_003218850.1| hypothetical protein CDR20291_2369 [Clostridium difficile R20291]
MEIRYAKEEEIESIKEIWSYCFNDTESFMKYYFNDKYKSENTVVALDEGKIISSLQLNQYKLLLNSKVYN
TSYVVGVSTLPEGRGAGYMNKVMKFTLNELYKKGQLVSILMPIDYRLYRRFGYEHCYDQIEYTINTDDLK
NFKSSGKMIKSNLSQIDDLIRIDRTFLNEVNGNVLKDEHYYENLFKEIQSEDGFLYIHEGNEKDGYIVYF
LQEDKMFVRELFYKNIDALKSMLKFIYNHNTQCKIVTISTPTIDKIRFILDNPKDSDIKIKPFMMGRVIN
VKKFIEDIDIEKDINSSFNLLIEDKFIDENNGLFKISIQNKKVSVEQLDKKGAEKPQEDFDIKLDINTLT
QLSFSYIDVNEAIFLNDIKDVSEETLETLNCIFSKKNTYINEYI
>gi|260687717|ref|YP_003218851.1| hypothetical protein CDR20291_2370 [Clostridium difficile R20291]
MFFKDIELNSKKELDPYFDLVDYEACEYCFSTLYMWQHVYKTGYYIGEDFAVLVGEYEGDSFSILPLAKK
DKLPEVVDFVLEYFSKNNKKIYLRGITTEVVEFLKEKYPGRFEYIEERDLFDYIYDAESLRTLAGKKNQK
KRNHINYFLKEYAGRYEAKLLDKENFDECLVLMKEWESNKEENNEFDESMDDELIGIKKIFNHYDILKDK
VKVFGVYVDGKLEAFSIGELLNPNMALIHIEKANPDIRGLYPFINQQFLVSEFKDVEFVNREEDLGIEGL
RKAKLSYHPCRFVEKYSVREA
>gi|260687718|ref|YP_003218852.1| metallo beta-lactamase superfamily lipoprotein [Clostridium difficile R20291]
MRNKIFLSILIIISLLIGCDKKSLLSIHIIDVGQGDSILVQTPTNKNILIDGGDEDSENIIISYLRQKRI
KTIDIIIATHPDSDHIGSLDNVIKKFNVNSIYMPEQSTDSEAYQNLINSCTDKNLSIQHLYKNDVLNIDN
NINIYVLSPSYIQEESNLNSIVFKLTFNDNSFLFMGDAEEENEKEILHSFKLNNINFIKIGHHGSNSSSS
LEFIKKISPDIAAISCGYKNQYGHPHREVINNLKQNHVSIYRTDRIGDIVFYSDGEIIFTKYNYEIDT
>gi|260687719|ref|YP_003218853.1| hypothetical protein CDR20291_2372 [Clostridium difficile R20291]
MENNFTTRTSFLVGDDGIEKLNNSNIIVFGVGGVGSFTVEALARAGVGNITIVDFDDVDITNINRQIPAL
HSTVGRYKVDVMEERILDINPNINIKKIRSLYNKDTSDEILTERYDYVVDAIDMVSSKIHLIETCEKKGL
KIISSMGMGNKLDPTKIVVTDIHKTSTCPLAKVMRKELRDRGIKKLKVVYSTEQPIELKKKVMNGRKVTP
GSVSFVPSVGGLIIASVIVNELLGQ
>gi|260687720|ref|YP_003218854.1| hypothetical protein CDR20291_2373 [Clostridium difficile R20291]
MNFKKLSNAKVSVMAVVLSVGILSGYSALNKQVTLVVRGEERTISTFSSNVGDLLESQNISYDANDIVTL
DENTKLSNGDKIEVIDVKEKTVVETKDIPFEVTVVEDGSLLKGDSKVKEEGKSGKSELIYKETYHNGKKV
EKEFVKKVVKAEPVNKVVSKGTKVEMQVASSRGESSRRMASSSSSSSSSNNGKNMRVVATAYTGHSITAT
GTKPKWGTIAVDPKVIPYGTKVYIPQFDMVFTAEDCGGAIKGNKIDIYMNDSKTVYNWGRKTIDIRILK
>gi|260687721|ref|YP_003218855.1| uracil-DNA glycosylase [Clostridium difficile R20291]
MVNLGNDWDELLKEEFEKDYYLNLRKFLIEEYKTRQIFPNMHNIYEALKHTSYKDTKVLILGQDPYHGDN
QAHGLAFSVQPQVKTPPSLLNMYKELKDDLGCFIPNNGYLMPWADQGVLLLNTALTVRAHEANSHKNKGW
EIFTDRVISILSEREDPVIFVLWGSNARKKVELIDTSKHYILEAPHPSPLSASKGFFGCKHFSKINEILK
KLGKEPINWQIENI
>gi|260687722|ref|YP_003218856.1| putative lipoprotein [Clostridium difficile R20291]
MKKKDILLILGILVVIIACYGIINVINSKNAGNIEIYVDNKLYKTVSINAKEEFKIENRGGYNIVKIHDK
GVEIVDASCPDKVCVHTGFINKPSQSIVCIPNRVSIKINTNEKNDNQEDIISK
>gi|260687723|ref|YP_003218857.1| hypothetical protein CDR20291_2376 [Clostridium difficile R20291]
MNKKKITFIFVILILALILFSFFRSSSQNTKYSKTSYYLGTVNEVTIFNVKESKSDKILNECDSILRYID
NKMSTHIPGSDVSKINDNAGKKFVRVSDDTFFVVKEAIQYSKLSDGYFDITIGPLSNLWAIGTDKAKVPS
DSEIQKLLPLIDYKNIILDEKNKSIKLTKENMKIDLGAIAKGYAADKIVAYLKSEDVKKGLVNLGGNIFT
LEDGKNDKPFKIGIQDPTSKNGESIGNIETTNKSVVTSGIYERFIEKDGKIYHHMLNPFTGYPFENNLSS
VTIISDKSINCDALSTSTFGLGLEKGMDLINEIDNVDAIFITKDKKVYLTKGIKDNFKLTDKSFSIEKLN
KQ
>gi|260687724|ref|YP_003218858.1| putative aminotransferase [Clostridium difficile R20291]
MYNFDDKPDRVSEKCRKWDLNIIRDKFGDIREDFVPMWIADMDFKIPTEIENKFIEAVRRGVFGYTYCYD
EFYDSVIGWQKNMHEVNVEKEWITLTYGTVSTLHYVVQAFCKKGDSIILNTPVYDPFESSAKKQGVNVIC
NTLDVVNDRYYINFDKLEVQIKENKPKLMMFCTPHNPSGRIWTIEEMTRVATICKENNVILVADEVHAEH
IHYGKFNSILKIGKELLENVILLTSPNKGFNLGGLKTSYSIVINKNIRDKFRNKLKQNSITSPNVFGIIG
LITAYNECHEWLSGVNEYIKSNYELLETWVNKYNKIKLMKMESSYLAWMDISGLGISASEFTDKLAIDTG
VLLEDGSHFVKDGEKYVRINLGTQKENVIEALNRMDLFLKSL
>gi|260687725|ref|YP_003218859.1| Xaa-Pro dipeptidase [Clostridium difficile R20291]
MDKIEKVREYFREYDIDGFLINSPTNKFYVGNLFSSSGYVFITKESQYIIVDFRYFEEIKRKSSLFNVVL
MDKTRTHFDIINDICREQNIKEIGFEGNEVSFDLYRSMSNKLSATLKSVDLSTLRETKNEDEIKYIKKAC
EIVDATFYHIVDFIKIGMTEKQVENEIVRIIKDLGGQKESFDTIVASGLRGALPHGKASEKIIEYGDFVT
FDFGAKYNNYCSDITRTICMGTINKELEEIYNIVRKANEECIRVLRPGMTTGEIDKVARDIIGSYGYANN
FGHNLGHGVGIMVHEYPALAPESNEVLKEGMIVTIEPGIYVPSLGGVRIEDDVLITQDGCMRLTTSTKDL
IVVS
>gi|260687726|ref|YP_003218860.1| PTS system, IIc component [Clostridium difficile R20291]
MAIKKKVINSSGASTTGGNNVGKSTPSSPTQSKGNGKWKEISKHIMTGISYMIPVLVMGGLIGALSQLIP
YAILGLDPSVGIVDAMNSGEFTGFKLSLLNIAQLMSNFGFTLFGFAIPLFAAFCANSIGGKTALIAGFIG
GYIANKPVGVPQFIDGQWTEVVPVASGFLGAILIAFIIGYFVKWLNKSIKVSHNWLAFKTTFLIPLIASL
ACMVLMIFIITPFGGLINESMKNFLTAAGAAGEYVYATALAAATAFDLGGPINKAAGFVALGLTTENVLP
ITARTIAIVVPPIGLGLTTLLDKRLVGRRVYDRQFYQAGKTSIFLSFMGISEGAIPFALERPGFVIPLNI
VGSVIGAITGIILGAIQWFPESAIWAWPLVDNLFGYIIGIAVGAIFIAVGNIFYRNKLIKDGKLVVDYID
>gi|260687727|ref|YP_003218861.1| PTS system, IIb component [Clostridium difficile R20291]
MNKKLVALCACPMGLAHTFMAAEAIEQAAKALGYEAKVETQGADGVQNELTRDDILGATMIIHAVAITPE
GMERFDGCEVYEVELQEAIKNAEGVIKEIEEDLGI
>gi|260687728|ref|YP_003218862.1| pts system, IIa component [Clostridium difficile R20291]
MGTNIFNKEYVFLNVDAKSKVEVLKFISKKAKDLNLAEDESLVYEGLMAREEQFTTNLGESIAIPHTKND
AIENPAVVVLKFNEDVVWNEGEDKVKLAISLLMPGKSKENIHLKLLSSLSRKLINKEFKDSLLKSDNVEE
ISNLINEALGL
>gi|260687729|ref|YP_003218863.1| transcriptional antiterminator [Clostridium difficile R20291]
MITKKHAIIVKSLSNKDGYMTSNELAIKLDVSTKTIKRYIADLNSVLSKYDLVIASSRGIGYKLSGSKNN
IARAVKEANKYIDGFLDDSEESRMSNIICMLINRNYMSIEAMAEELNLSIAAINKLSSKLKRKLEKYDLV
IKSKPYYGSYIHGEEINIRQLITDYAIKLDEKSKVKVFLDDISENDIYCIESILEKHLREKDTIISDKDF
NLLLSKIIVSVFRSKRGHSNNINLMDTSYRFHNYYFIENLMKEISDKIGFKLIEDEVIYISNYSGVIAYK
GTQGRKNTSEIEERISSVISSALQDIFLISGSDYTKDDEFMVAISDHIKRFLNRARANVKSNNPLLHQIK
EKFPIAFNLAVFLSNKLETEFNLKLDEDELGYIAIHFAASNERMKKNTSKKICIVCHYGIGTGQLISEKL
KQNISDLSVVGVYPVRYLDMAISQDVDLIVSTVELKGYEKPVLYIENIFDDSLIENVNKAFYEKEERRKI
ISNMFDEKAFFSIKASTKEEVIISLSNKLKERDFIEESSIKSIIDRENISSTEIGNLVAIPHTIVKGDKK
SIIGVGILENPIIWDKQEVQLVFMVFFNTKEKHNFSIFKYLYNFIKDEGGVRGIIKICDFNKLMALIGN
>gi|260687730|ref|YP_003218864.1| putative peptidase [Clostridium difficile R20291]
MELFKAESKKYEKEFLKLLEQWVSIPSFYDRKTVSKDMPFGKGVYDALNWFENLGRENNFKVKNIDNHAV
QIEYGNGKEYVDIFGHCDVVNPGEGWDSEPFKLNIIGDKLVARGVSDNKGPMIVNFLALKMIKDLDINLK
RKVRLIAGGNEESGFKCIKHYYSKEPYGVCGFTPDAKFPVLNGEKGGAIIKLISNIDDKSLYISGGIEFN
TIPDKVYIKNVEKLGKDNICFDINNISINYDNGNYIVYGKGGHSSKPEKSINPILATIKLLSENIDEKWT
KDLYKLINQDNINGNLFGLNIEGKCGILSIVPTIINIVDGKLEVVLSVRYPEILTIEDIIKKFNLYMEQN
NINKFELIGENLKQANYIDRNSKLVRSLHDIYIKYSGDLKNDVRVTSAGSYASEMNNSVIFGCEFPDGSF
GNVHSANEFASLDRFITAIGIYAEAIITLCNKI
>gi|260687731|ref|YP_003218865.1| mannose-6-phosphate isomerase [Clostridium difficile R20291]
MEPLFLKPIFMDRIWGGTALKDKFNYEIDSPTTGECWAISSHKNGDCLIENGKYKGKKLSELWNKNRELF
GNTPGDKFPLLTKILDANDNLSVQVHPNDEYAKKNENGELGKTECWYVIDCSDDAEIIIGHNAKSHKEFV
NMVNNNEWDKLLRKVNIKKGDFFYVPSGTIHAICKGTLILETQQNSDTTYRVYDYDRTDNSGNKRELHVQ
KSIDVTNVPHINFDTDYKIVSTSDFKCTTFVSNEFFSVYKLDVFGKCNFTHNTPFSLYSVLDGNGKLIHN
SVEYNLKKGMHFILPNDFGDFSFEGNLEIICSHI
>gi|260687732|ref|YP_003218866.1| putative sensor histidine kinase [Clostridium difficile R20291]
MSLLFIIMGSVLLLFIIKDIEKYETLLHAIYTIFLVATGVIIFNTTKFKVDSFSTFLGLIFIATGVLECI
YLFNSLGIKTKSIMEINITISAITDLFPILGVYLSFKFVKDNKQIYSSIILFIATATLTITSLFIISGIC
DYLGNGKSQYALGVIISIFIIIISIISGIELNSSSNKGKWEYDEKKIFNRIIVIIILSRVPNLLHIVIDN
RNVERILSQIIINVALYYLYNYIVSKNIKKTALELHDTNEELTKKTESLKEKNKKLIYETEKIEELKGIL
MKRESRLQSTLDVAVNSIVVFSKDGEITYANKSFRNTFGDYKEQDKLTDKIKNFNDLIESIHYVFVHEKN
AEKLISTSDNKVYQAIFAPLIIASQTEGVLCVLEDKTKKKEYERKLIEANKRSKDFLESIGDGIVVLEGN
NKIYVNNACREIFKNNLESIDFSLVCKSEESIEKRYVIDGEVKYVEMSFSQYTNAGTNKTIIVIRDTTSR
KISQIKLEESQSSYSRFIDILPDGICLLKEDLSINYANKSFLDMLAFTNIDDIKDSNIKLLMNANTEEKM
KFTDNMAKVLNENRSILLLEYELINSYDDIVEVELSALPFAIYNTRYIMLIIKDLVHKKYSEQAEKELLE
RFKTDKIKTEFFANMSHELKTPLNVISSSNQLVDSFYRNEKIKDYNNNIKSHVDLVRQSSYRLQRLINNI
IDLTKMESGFYTLKLAKYNIVSVIEDLFMNIEEYALRKDIKILFDTDLEEINVYIDKVEIERIMLNLLSN
CIKFTDNGGWIYVSIHYKIDKVIISVKDTGVGIPQDKLELIFEEFSQVDKTLSRNTEGSGIGLAIVKNLV
SLHGGDIEVVSEVNKGTEFLISLPMKGFSSEHYTEDKRIYNIQEKIKIEFSDIYY
>gi|260687733|ref|YP_003218867.1| selenocysteine-specific elongation factor [Clostridium difficile R20291]
MKNVVIGTAGHIDHGKTTLIKALTGRETDTLDEEKKRGISINLGFTYFDLPNNRRAGIVDVPGHEKFIKN
MLAGASGIDIVLLVVAADEGVMPQTVEHLDILSFLNIKNGIVVLTKSDTVDDEFRELVKEDICEKIKGTF
LEDAEIIEVDSISKRGIDTLIEKIDKMSDDIEDKNENSPARLNIDRVFSIKGFGTVITGTLIEGKISIED
DLVIYPQVLKTKIRSIQVHGENKDTAYAGQRTAINISNVKVDDIKRGDVLAAPNSLEESMMLDVKLSLVN
HLDKGLKHWDRLRLYHGTREILCRAVPLDKELIESGESGYVQLRLEESIVSKKGDTFVVRRYSPMETIGG
GVIIDPSPKKHKKFDEKVIEALKIKEKGELKDIIEEYLKRNLKNYPNIKEIMSYSGAHEEDVKRALEALI
SEDKVFIIGNMYMHINQYNKLKENTIKLLSEYHKKYRLRKGILKEEVRSKIESNFKTREMDILLEKLSTE
NAIKIENNIVSLLDFEVILNDKQKEIAKKIEKRLKSCGVSSILTIDEVSEGNHNYAEVLESMIGNKVEKL
DDLYIMDKDIYENAKNILINYIKENKEITLGEYRDLIDSSRKNCMIILENFDRNKITKRVENKRILF
>gi|260687734|ref|YP_003218868.1| L-seryl-tRNA(Sec) selenium transferase (selenocysteinyl-tRNA(Sec) synthase) [Clostridium difficile R20291]
MIVLSKRELFAMLPSVDEVLSDNRIVEIINEYPRSLVLESVREVIDLKRQFILRLKEDASNSVTIEFGEI
IESAIERVKLNYSLSLKKVINATGTVIHTNLGRSLLSEDIKDELWCAASRYSNLEYDLDNGERGSRYSHL
TSTIKRLTGAEDVLVVNNNAAAVLLVLSTMAKGGEAIVSRGELVEVGGSFRIPSIMALSGAELVEVGSTN
KTHLKDYKEAITEDTNVLMKVHTSNYRIMGFTESVSIEELVNLGKKYKLPVIEDLGSGVFIDLSKYGLSY
EPTVLDSIRQGADVVTFSGDKMLGGPQAGIIVGKKEYIEKMKKNQLTRALRVDKLTICALEATLRMYLDE
TKAIENIPTLKMLTYKIEELEVKANKLFEKITALNLNANINIEDGFSQVGGGSMPLETISTKVISITPEH
MNVSSLEKKLRLSEAHIIARVYDNKYVLDVRTIFDDEFDVIVAELRKAFN
>gi|260687735|ref|YP_003218869.1| selenide,water dikinase [Clostridium difficile R20291]
MPKNDNIENLLVGLDTADDAAVYKLNDDMALIQTLDFFTPMVDNPYVFGQIAASNSLSDVYAMGGKPLVA
MNIVCFPSCHDMDVLAEILKGGFDKVKESGALLVGGHTVDDKEPKYGLSVSGIVSPNKVLSNATAKPGDK
LIITKPIGVGVLNTAMKEGMVEQHIADKVIEIMIHLNKYAAMSFEKFDVNSVTDITGFGLLGHTLEMAKA
SEVSIEIESKHVPIIEGAIEMAQMGIIPAGMYKNMHYVSKDVEVVGNIEVAVQDILYDPQTSGGLLISVK
EELAEELVKDMKLNGAIEAKIIGSVVPKGEKYITVL
>gi|260687736|ref|YP_003218870.1| putative competence protein [Clostridium difficile R20291]
MKKKVKFISFFVLFILIISSIIVYKSLIFKDDIYVVSKKNLPNEKTHVVENEIKGEDNNHNKVTKDIDKN
FQNNKITIYISGAVNRPGIVTIESDKRLYDAVELLGGTTKEADLNGVNLSVRLEDEQHYIIPKIGEATSV
TSNDDSNKPNQKNESRGEPKNKSNKNISNESKVNINVATIEELDSLPGVGEATANKILQHREENGQFSSI
EEIKNVNGIGDKKYENIKDLICVD
>gi|260687737|ref|YP_003218871.1| D-alanyl-D-alanine carboxypeptidase (putative sporulation-specific penicillin-binding protein) [Clostridium difficile R20291]
MKRNLSLLLICLLIFTSFLGSSNISFADNEPAIVAKHAVLMDYESGKILYNKDGNSKLYPASTTKVWTAC
LVLKEVKDLNQVIEIKDLPQIDGSSMYLKNGESFTVKQLLDALLVHSANDAAFVLARYVGGGNVQKFIDL
MNSEAKKIGATNTHFNNPHGLPDPNHYTTAHDMALIAREAMNNDTFRQIVKTKSLKFEATKAYPYERYFV
NTNKFLTSHDKITYKGQPINIKYDIVDGIKTGYTDAAGKCLLSSAVKDGRRVIVAVFNSTNADLYLDSRI
LIDYGFDNFKCATIVDKEKYTDTKKVLFTKQHELIYEPKNSYRIFLEKDESQGNYDTKTELNKIDLPIKK
GAKVGTLNVYNNGKLENSIDLIAKNNLDSSLPFFTGNNILMTFVKIIAGILVLLVLFIIASNIKKKKRKK
ARSKKNMKK
>gi|260687738|ref|YP_003218872.1| hypothetical protein CDR20291_2391 [Clostridium difficile R20291]
MNLLVIGGHERMEKDYMVMAKKKGYKTKVYTTMSSKLNNSIGRPDAVVILTSTVSHKMSRTVESQAKKQD
ILIVRHKNSSKVAFNECLDMVDECLGNCSKCKLKDKQKQKNI
>gi|260687739|ref|YP_003218873.1| argininosuccinate lyase [Clostridium difficile R20291]
MKLWGGRFRKAENQLMEEFNKSFGYDCVLYKKDIEGSVAHVHMQVKCGLLTEEEGKSITEGLKGILEDVE
NGKLVLDGEYEDIHSFTEINLIQRIGDVGKKLHTARSRNDQVAVDMRLYAKEKANDLVGLISEFKATIKD
VADKNPVMMPGYTHLQRAQVVTFKHHLMAYYSMFDRDEKRIKNAIEILDESPLGCGALAGTTHDIDRSIT
CEQLGFKKVVDNFMDGVSDRDYLLELMSDFSIIMMHLSRLSEELILWSSQEFGFVEIDDLYTTGSSIMPQ
KKNPDGAELIRGKTGRVYGNLFGLFTVMKGIPLAYNKDMQEDKEGFFDSVHTLEMCIQIMDRMIATLKVN
EDKMKQAVKNGFLNATEVADYLVKNNVAFRDAHGIVGSIVIYCEDNKKAIEDLTLEELHKFSDAFKEDIY
DFIDYESILNKGIKKNLK
>gi|260687740|ref|YP_003218874.1| putative hydrolase [Clostridium difficile R20291]
MGYKLIVTDMDGTLLGNNHKVTDENKTALQKVIKSGINVTLATGRAFDSAKCNVDFLKEDMPIIACNGSL
IREQNGNIIYSNKIDTRTCLNILDVLDKYDIYYQCNSIDSMLSKKIEGREDRLSVFLGSETEVIVKDDLR
EEIFKKDILKFVIIEEKNPSILDEIRKELRKVQGIKITSSWPNNIEVMNEGVDKGNAVKILAEKMNIDRE
DIIAFGDNYNDIEMIKFAGLGVAMGNAEELIKQEADYVTDTNQDSGVAKAIYKFLELKESLSS
>gi|260687741|ref|YP_003218875.1| putative histidinol-phosphate aminotransferase [Clostridium difficile R20291]
MKLKINKAIEMQLKKSYAIESGHSEDVFEIDCGEGINTVSYSSKAVEAFNALKFDMIRGYPHSIALKDNI
VDYWKDFIALDTDRICLADGSIHVIYLLNRLFIEKGDKVLGYSPQFSEYETDIKMHGATYDYVLLKKEDN
FKFNEKEFIEKINPEYKVIYIDNPNNPTGQIIPLSSIENIVKEAAKYDIAVMVDEAYGEYMPKENSAVKL
LNNYDNVIALKTFSKGFGLAGLRAGYAVLPEQLVSPIKKISTPYEVSEISRSIAANLLDDVQFIEELKEK
TKDIKNQLLIPWKNLNIAETSDTVSIMTVEHKNKDIDLQQEFAKLKIRVISGSDFTGLDKNFIRFRMPEE
KELPEVIKAFQIIDNIE
>gi|260687742|ref|YP_003218876.1| cation-transporting ATPase [Clostridium difficile R20291]
MSYKSTYQEVIKNLDSSLSGLSKERAEELLEKNGANELKEADKVPTYKLFLESFKDPLVIILLIAALVQI
FLGETVESIIIFAVIIINSVLGVVQTKKAESSLESLKNLSAPNAKVIRDNKKMTIPAKNLVVGDIVFLEA
GDYIPADGRLIEAQSLKVVEGMLTGESEPVLKHTEKISEDVSLGDQKNMVFSGAVVVYGRGSFVVTGTGM
DTEMGKIAGLLESAENKLTPLQQKIEDFSKKLGVGIVILALLIFIIQVARNYFMAGNGEMTQIILDSFMF
SVAVAVAAIPEALSSIVTIVLAVGTNSMAKKQAIIRKLPAVETLGSTSVICTDKTGTLTQNKMTVVDYYM
YGTNNDELDKEKVNYSYHAKLLTMVSTLCNDSHITSDGKEVGDPTEVALINYSSKNDLDYDKLRSKYIRI
NEIPFDSDRKLMSTVNSIYGDYIMFTKGAPDIVFSRCKYALKNGSKVDITDEIIEEYKHKNEEFSNRALR
VLAFAIKDVPEEDFIPSIDDEHDMTLVGIMAMIDPPREEVMDAVKEAKSAGIKTVMITGDHKTTAAAIAK
EIGIMEEGDLALTGKELDALSEEQLYEKLENISVYARVSPENKIRIVKAWQHKNNITAMTGDGVNDAPAL
KQADIGIGMGSGTDVAKDASAMVLVDDNFASIVNAVEVGRTVYSNIIKSITYLFAGNLGAIVSIVFAVFA
GWSNPFTALQLLFINLVNDSLPAIALGFEKSEKNIMNKPPRHPDESILAGGTLKAVAIRGCIIGVVTIIA
QYIGLQVSPELGVAMAFSTLILARIMQTLPARSNNQTVIKLGFFSNKYVIGAVLVCLGLYSLTLIPVLRG
IFSIPTTFGLYQLGICLGLALISSILMELNKLINRSEVK
>gi|260687743|ref|YP_003218877.1| putative D-alanyl-D-alanine carboxypeptidase [Clostridium difficile R20291]
MKKKICVAIIFALFIVFVEMFIDSSSEGSKIMTAELSKYRKGVNVLSINNIIVANKKYSLPKDYSPQESS
EARDAFYKMNKDAQKSGLNLKAFSTYRSYEYQDRLFKSYVKEHGEKEANRFSAKPGESEHQTGLAFDIGG
DDQSCWANKKFNNTKEAKWLYENAYKYGFILRYPEGKENITGYMYESWHYRYVGTEHSKNFAMNNLTLEE
YLHIN
>gi|260687744|ref|YP_003218878.1| TetR-family transcriptional regulator [Clostridium difficile R20291]
MKGDNKVTEKQRLIINIAQKIFDQKGFQNTSISDVVKECKMSKATFYKHFETKESFICEIINYYDEKFLE
IIHSINENNDIPSSEKLNRKIIAVWKNIFSRTTINTYIRENFSEEQRKATSKLQTKSRANLLNEYKLSLF
DNYGDKIEKIIFDLVFLLDALIHQFIYIIHVQKREINVYFIAKFTIQILDLVVENMDNLNPLIEKSMFLH
KQEDEVYFSLHNKSLFFKTIQDIEELIKTDTSLLENPKLLEAIKKLYVEGKNQQYDSLIMDAMIAYLEKE
DTLRPKVLLLNSIKNQLKKETL
>gi|260687745|ref|YP_003218879.1| putative transporter [Clostridium difficile R20291]
METQSNNKKGNLIIAIVMTGAFISSLSQTLLSTALPNIMSDFKITADIGQWLTTIYLLIAGIIVPTTAYL
INRFSTRKLFITSMSIFSIGCIIALFSNNFSTMLIARVLQAMGSGSLMPLLQVIILYLCPEEKRGAAMSL
VGITVGFAPAIGPTLSGWLVDSFGWHSLFLFLSPIAILDVILSFILLRNVGETQKLKLDIPSIVLSSLGF
GGLLIGFTNQGNYGWTNIATYLPILIGIMSLILFTLRQLKSKEPFLELRVFKNKPFLISTILIMIVYASM
MSATLMIPLYVQSVRGFSALSSGSLMLPGAILMVVLNPIAGRHLDKYGPHALSILGTGCLFLGTLSFAFL
GRDTSLIHVSLMYCIRMIGISMVLMPLTTWGIKTLDRELISHATAINNTLRQISGAIGSAILITIMTSAT
KKAHMSSNMLSNIHGIDVAFSIAATLAFTGLIVSICFIKRHQIIRS
>gi|260687746|ref|YP_003218880.1| hypothetical protein CDR20291_2399 [Clostridium difficile R20291]
MNKEYLEETKMLNYNEPQLKLLVSSKNWLELDDFHKIKSIYEFVQNDILFGYNASDMLSATQVLNDGMGQ
CNTKATLLMALLRAVNIPCRLHAFDVTKDFQRGATSKLISLLAPKYILHTWVEVFYQDRWIALEGVITDK
KYLEAIQKKFFNHGGTFKKYAIATNDLKNTSIDWDGKDTFIQKEAIVYDYGIFPSPDVFFSTHSQHMSKL
KNFIYVHLIRKIMTKNVCKARNNYIDKNE
>gi|260687747|ref|YP_003218881.1| AraC-family transcriptional regulator [Clostridium difficile R20291]
MIFLEEWGDAMNIINKIFWQEDRIGMITNNLEADTHSHCMLQLFLGIEDSIEITVNEKLVKCNCIIVDKN
ISHSFSARKKVYYSAIIEPTSIYAEQLTSKMNDFGYWICDNDGLEKLRQQGTFLIYNSSKEQYLRFMEML
NNYLNIPITLKHYDDRITELLNLLRTCNCDNHTISSFADKVSLSASRLSHLFKEQIGIPLKSYILFHQME
CAFRELLSGKNVTEASMTAGFDTPSHFAGTVKRMMGMPVSLSLKDSEFLKVY
>gi|260687748|ref|YP_003218882.1| putative 6-phospho-alpha-glucosidase [Clostridium difficile R20291]
MIITIVGGGSTFTPGIVKSIALREKELELEEIRLFDIDKERQDKVAVVVNWILKEDVKTDVKLTVTNCEK
EAYTDATFIFAQMRVGKYEMREQDEKIPLKYGCVGQETCGCGGMAYGLRTIQPMIKVIDDVEKYAKKDYW
ILNYSNPAAIVSEACRKLRPNARIINICDMPIAIIDMIAESLNINDVHNIRYDYFGLNHFGWFTSIDYKH
RDLMEEIKEYIKENKILLPKSYIENLNKSRSTGNRHAVSSWIHVWESVYTMLESFPKYLPNTYLTYYLLS
KETVEHSNINRTRANEVMESREKDLFEGVRHYLETGEISEKVFYAGSHGDWISDLAVSIKNDTRSRFLVI
TENRGAIPNMPYDAMVEIPAYIGKDGPEVIARGPIPLFQQGLMMQQLNSEKLIVEAYIENSYEKALQAFT
LNKTIPSMNVAKEILDEMIEVNKEYWPELR
>gi|260687749|ref|YP_003218883.1| PTS system, IIbc component [Clostridium difficile R20291]
MVQPLMYLSSAGILMVVGVLLTNDMLLGVLPFFKWEPIQIFGSLIYNCIMAIINNLAVIFAIGIPAALAK
KEKHKAALIGFMSYIIYLTASNTMLTSLGQLAKESKMLGLIGTGQATILGIQVVDTSVFGGIILGCIAGY
VFNRTSNKTFKGALQIYSGANFSFICMFFVSILIGVVSNFIWPLAQQGIASLANVIKDTGTFGLFLYGFL
ERILVPTGLHHLIYTPFQFSDLGGVLKVGADTVSGAYAIVMTEMNLPVERFSDSIYYMATGFTKMFGYIG
IGAAFIYTAYKQNKKKVKATIIPLIITAVLASVTEPLDFMFVFCAPLLFFVHAVIAGLFIALLKIFDVTA
LCGGNLLVSIIMNTTVGVEKTHWPVMMILGLAQIIVYFVVFSFLIKKFNYKTPGREDESTATGEEQSKQL
NLDAGIENIIDGLGGKENINTVENCITRLRVNVKDESKINEDIINLTPNSGIVRKGKDIQIIFGLHVHEV
RRAVEDFLEAY
>gi|260687750|ref|YP_003218884.1| transcriptional antiterminator [Clostridium difficile R20291]
MRVVKIFNNNALSTVTNDRKEAILLGLGIGFNKRPGDKVNEDKIEKIYYVQDHMQTKFLELLKNVSPEVM
DASQQIISLIPGNEGKFNNKGILSLVEHISFAIDRMKNNVFLPNLMLLDIKMMYSKEFELGVKALEIIYR
VCHIHLPEDEAGYIALHFVNLQSNDNLAYDTLKFVKGSIDLIKECYGLELDESSLSTLRFRTHLKFLAQR
IFKNEICQDDKMIEMYDYLINNHPKNKEYLEKLNVYIEKEFRYKLDKPEKIYLLLHLTKIL
>gi|260687751|ref|YP_003218885.1| PTS system, IIa component [Clostridium difficile R20291]
MLNFFKKNKSYKLHAVVSGNSINIEKVNDSVFSKKLMGDGVAIIPNSNVVVAPCNGKVTVLTESKHAFGM
VSDEGVEILVHIGIDTVNLQGEGFKNEVSQGDTVKKGSPIISFEREKINSQGIDCTTIIIVLNHSEFSEI
NCMVENEVVAGQDTVIEIMK
>gi|260687752|ref|YP_003218886.1| putative translation inhibitor endoribonuclease [Clostridium difficile R20291]
MKHEVIHTNDAPAALGPYSQAIKAGNLLFVSGQVPLVPETMEVVEGDVQAQTAQSLKNLKAILAESGADF
SNVVKTTVFIKDMNEFGAINEVYAEYFGENKPARACVEVARLPKDVKVEIEVIAVL
>gi|260687753|ref|YP_003218887.1| threonine dehydratase catabolic [Clostridium difficile R20291]
MMNVTLTDVKEARETIKNIVKRTDLLESVKLSEKTGANVFYKCENLQKTGSFKLRGACNKIASLTDEEKA
NGVIASSAGNHAQGVALGAKMTGIKSTIVMPATAPLAKVSATKGYGAEVVLNGAVYDDAYAKAVEIQKET
GATFLHPFNDKYVIAGQGTISLEIFEQLDNKVDTILCPVGGGGIISGVAVAAKALNPNVKIVGVQTANIP
SMKESIKNGKVTTAFNDTTIADGIAVKTPGDLTFEIINELVDEIVVVEETEIAESILFMMESQKIVSEGA
GAVCTAAILSGKYVPAKDENVVCIISGGNIDINTLYRIIGVALAKEGRRYSFSTIMEDKPGNFAELTRII
SENGGNILSANQGKLSAGEALGKQSAEFILETIDYDHIARIKKAIEEKGFKIIEL
>gi|260687754|ref|YP_003218888.1| L-aspartate-beta-decarboxylase [Clostridium difficile R20291]
MKNHTYKEIKNIYGKISPFEFKDKLIDIAKYTAKENNRELLDAGRGNPNWTCSTAREAFFTFGHFAITET
RSNWDLGHLAGMPQKKGIKERFFKFINENIDMPGAYLARDIINFGINELGFDGDEFVHELADGIIGDNYP
LPDRMLPHMEKIVHDYLVQEMKYDISGKYGDVEIFAVEGATAAMCYIFDSLMANELLKKGDTIALMTPIF
TPYLEIPNLPRYDFKVVNINANEVDEKGAHTWQYTKKELEKLRDKSIKALFVVNPNNPASIAMDEISCNN
LIDVIENYNKDLMIISDDVYGTFVEDFSSLMSKLPYNTVGVYSYSKYFGVTGWRLGTFALHKKNVFDKKI
NDLTGELKKSVDKRYSDMSLNPSSLSFMERVVADSRLVALNHTAGLSTPQQVQMAFFSAFALIDKVDAYK
KLNMSICHRRQKLLFEALELPINENKNNAAYYTQFDIEEWAKLNYGEDLFKFISKTASPVDVLYKLANDY
SVVLLSGNGFYGPEWSIRISLANLYDEAYTKIGKAIREILNGYIVEWQKIKK
>gi|260687755|ref|YP_003218889.1| putative L-asparaginase [Clostridium difficile R20291]
MSIKKKVAIVFTGGTISMTVDDKVGAAIPTLSGEQILSMVTNIDKVADVEVFNFDEIPGPHITPYRMMEL
KNYVNDLLARKDITGVVITHGTDSLEETAYFLDLTIDNIKPVIVTGAMRSSSELGYDGSSNLSASVCTAV
SKDAMGKGVLVVLNNEVLLASEATKTNTLSLNTFKSLTSGPLGIIDCNELVLTRDIVNRTIIDTDKVESK
VALFKAYVGENADFIRFAVDSGYKGIVIEAMGIGNIPPQMLSGVEYAREKGLPVVIVSRCHSGRVFDSYG
YFGSGRDLKNLGCIFGGDLPGQKARIKLILALGKTDNLDEIKDFFEKGIYC
>gi|260687756|ref|YP_003218890.1| hypothetical protein CDR20291_2409 [Clostridium difficile R20291]
MRGCVQMETVSNNQSSVEIQLSLFEAIKDLLLINPIFLLGIILIGIFLVVIFKKNSDIPKVKTSILSLAM
YYYLCLTLSHIVGIPTFSEYIRLSQLGETFFNPNINLIPFSDGFSLSFILNILLFVPLGFLCPLISKTFE
RLRNTFLIGFGLSLFIETIQLFTLHRATDIDDLLTNVIGTIIGYFCFKLIAKLRIVKLHSDDDSMEQDYT
VCIPIAIIIVALILGFFS
>gi|260687757|ref|YP_003218891.1| leucyl-tRNA synthetase [Clostridium difficile R20291]
MSVYNFKEVESKWQKIWKDNNQYKMDTAQTEKPNYYTLEMFPYPSGKIHMGHVRNYSIGDVVARFKKMEG
YNVLHPMGWDSFGLPAENAAIKHGIHPHKWTMENIEEMKEQLNLLGISYDWDKEVATSTPEYYRFTQEIF
LKFLEHGLAYKKKSYVNWCPSCETVLANEQVVQGACERCKATVLKKDLEQWYFKTTEFAEELLNDLDTLD
GWPEKVKTMQKNWIGKSTGADLVFDIDGTDKSMTVFTTRPDTTYGVTYMVLAPEHELVKELVAGTEYEAD
VEAFVQKMHTMTEIERTAADVEKEGMFIGRYVINPLNGKKVPLWIANYVLVEYGTGAIMAVPAHDERDRD
FAEKYNLDIIDVITEDNKMINSEEFNGLDASEGFEGIIDKLEKEGRGKRTINYRLRDWLVSRQRYWGCPI
PVVYCDECGIVPVKKEDLPVLLPTDVEFTGKGESPLTTSKQFMSTTCPHCGKPARREVDTMDTFVDSSWY
FLRYVDSNNENEPFSKELVNRWHPVDQYIGGVEHAIMHLLYARWFVKAFKSMGMVDFNEPFKNLLTQGMV
LMDGSKMSKSKGNTVSPMDIIDEYGADTARLFVLFAAPPERDLDWSEQGVDGCFRFLNRVYRLVDELADV
VKKDVEFGELNSQDKDMRYTIHSTLKKVTADLSEKFGFNTAISALMELINDMYKYKELDNINEAVIKEGV
QTIVTIIAPFAPHLGEELWTMIGKEGSVFDIDWPKYDEKALVKDEIEVVVQVNGKVRGKLTVNSNISKDE
MEKVALEDEKIKGLVEGKTIVKVVAVPKKLVNIVVK
>gi|260687758|ref|YP_003218892.1| hypothetical protein CDR20291_2411 [Clostridium difficile R20291]
MTVEQMTKIAYDAIEDKLGQDTVIINIGKVSSLCDYFIITTASSQRQVKAIADNVEDELAKLGLEPRGKE
GQGTQTWVLLDYGDIMVHVFNEENRGFYNLEKLWKDAPYIDIDTLA
>gi|260687759|ref|YP_003218893.1| putative metal dependent phosphohydrolase [Clostridium difficile R20291]
MNLENINQRLNQMLPVGRLSHSRNVAKCAEKLCEIYGCDKEKAYLAGMIHDCAKYLSDKEIEDYVNKYEI
YLDPIEDGNRSLSHSVIGAYICEYEFEVEDEDIINAIKYHTTGREDMSLLEKIIYIADLIEEGRKFPVVD
TLRELAYGGKLDEALLTSFNNTLMFVINKKEEIHPRTVMARNYLIKEKLL
>gi|260687760|ref|YP_003218894.1| nicotinate-nucleotide adenylyltransferase [Clostridium difficile R20291]
MRSENLVKMAELKNTEKLEKFNRHKGKIKIGILGGTFDPIHYAHLATAEFIRDKYDIDKIIFIPSGNPPH
KLCITTDKYDRYNMTLLATESNEDFLVSKVEIERKKRTYTIDTLKYLKKKYKNADIYFITGADAICSVEE
WKDVKKNFELATFIAATRPGISLLRSQETIEKLTKKYNADIITVYVPSLDISSTYIREQLNEGKSIRYLV
PENVENYLYENKLYQYGDD
>gi|260687761|ref|YP_003218895.1| glycogen branching enzyme [Clostridium difficile R20291]
MKSQKRFKILDIDVYLQPFESDIKKRMKHYEDMKSKTLKNYKDFSSFANAHLYYGFHQTNDGFFYREWAP
NADSLSLIGDFNNWNRKSHPLRKIGSGNWEIFIPGQNSLPHKSEVKVQVTANGKTFDRIPLYIKRVIQKD
FGGFNGQIWQPKTPFIWTDNNFDLKNITSPLIYECHIGMSTESESIGTYNEFTEKILPKIKKAGYNTIQL
MAIMEHPYYASFGYQVSNFYAISSRFGTPEDLKNLINTAHSMGIAVLLDLVHSHAVKNTLEGINEFDGSE
HQFFHSGSKGNHPAWGTKLFNYGKPEVIHFLLSNIKFWLNEYHFDGFRFDGVTSMLYHNHGLGVSFDSYE
KYFSMNTDIEAITYLQFANELIKEIKPNSISIAEDMSGMPGMCIPIKDGGIGFDYRLAMGVPDFWIKTIS
NLSDEDWDLGKMWYELTTRRPGEKNIGYCESHDQALVGDKTIIFWLADKEMYWNMEINSNNHVINRAISL
IKLIKLITFSLAGEGYLNFMGNEFGHPEWIDFPREGNNWSYKYARRQWSLSEDNNLKYKQLLNFDKSMLE
LTKYSDIFIQNSHELIHMDNDKKILVYSKGKYLFIFNFHPNLIQSVDISKFQNTNYKTILNTDMVEFGGN
TKKENLRDYDVYFSSTPPSSKMPIASRTAIVLLDNGI
>gi|260687762|ref|YP_003218896.1| hypothetical protein CDR20291_2416 [Clostridium difficile R20291]
MKIITEIVEFNVEENLSKEEFIEIVNDLELKFHSIQSGFIDTELLYDEKSQKWIMIQHWESIEDLKSASS
KMFKDSSTEKFRKALKNQTVKMNIIPQIKSWKL
>gi|260687763|ref|YP_003218897.1| hypothetical protein CDR20291_2417 [Clostridium difficile R20291]
MLSVTRYSIKNVRLKPWVKFIWYFETKSNILLNNKLLPTDSIDIILNLSDVMEYKIENQDYTASNMHFNG
IRDKHGFIIQHGNIRVIGISFYPFGLYPFLKIPISEFNRQIVDLEAVSELFAKKLEESLNPTQSVEKIVL
YLEEMLLSILEEDLISNKSVKLLNSFIYDNRYSNIKAFCDNTNINIKTLERICLKYTGYTPKILKRIYRF
KMASSQLIYNYKDNELFDFIYENEYYDQAHFIKEFKKFSGTSPIKFIGENKTIKENIKYNYL
>gi|260687764|ref|YP_003218898.1| hypothetical protein CDR20291_2418 [Clostridium difficile R20291]
MEVTAKQKFTTKDMVETSLLIALVFIATKFINIRLPISINGGLVHLGTAMLFISAIVFGSKKGALSGAIG
MSLFDLISGWTLWAPFTFIVRGVMGYLLGKIAWANGNNGNNFLINVIGICVSSIWMLFGYYITEVILYGN
FIVPLTSIPGNLMQVLIGLIIALPISKVLKKCIK
>gi|260687765|ref|YP_003218899.1| putative aminotransferase [Clostridium difficile R20291]
MNKKINYAPGPTETRENVRLARAEKTTNPDIDIDFVEFYKKTCEKFGNIVGTKNDVYILSGEGILGLEAA
CASLTEKGDRVLVIDNGIYGEGFKDFVTMYGGEYVLFSSEYTKSIDIDELKAFLDEDSNFKYATVVHCDT
PTGVLNDVSKICPLLKEYGILTVVDSVAGMVGERLSVDESKIDIILGGSQKAISAPAGLTIVGISQDAKN
CIKNRKTDVIGFYCNLNIWEGYYEKKYFPYTMPISDIMGLDKALDNILEEGIENVLDRHEKIAYSVRKSI
EEYGLELFLEEGYSNTVTAIKIPESIGALKLTDYMLKNYNTLVATSLNQYMDTILRIGHMGENANLNKIE
HVLNVLDKSLSALGFKGNENLLNLFNKYYF
>gi|260687766|ref|YP_003218900.1| ABC transporter, permease protein [Clostridium difficile R20291]
MINTTKIAKSNLKQNKSKSILIIITIILSTLMLSSIGIYIVDAGAYQKENTIKYSGNYQGILANVDEKQA
DILSNHADVELTGEMNGVGVEKLEDDSNISLAYMNEDALKLNSFELIKGKLPTKENEIVLDSGALKALGY
KNKDLGEKIKISYNDYKNDKKIEKEFVISGILKTSEISEAGKYYYAIISELYMRNTRDMSQEDFNIYVKF
NDKSNLSIEQAKEKLDKIANDIGLDTINTAVNENYINALKPDMETIMGGGFVGLVIVLSSILVIYNIFYI
SIVTKVQEFGKLRAIGATKKQIKNIVFKEGFILAGIAIPIGIILGYVLANIIIKSFMDIDVKSSRLPVIL
SVVVISFISVVLSLLKPMKVASKVSIVDAVRYTGNKISNKSKRKGYKNINLKRLSHANLERNKKRTYMTL
ASLILSGTIFITVSTALESFDAEKMAREHFPYDIEVRLSGYEMNSDKNPKNNLNILQMDNPLSKDFFNQI
KNMEGIKRIESARSVKIGMEDYDVEFKYDLLQSINENDVKSLNKNLIDGKINLERLQTGDEIVITHVDTA
KEMGVKAGDKIRLTLYDGDKKIKKEFKVQAIAMGVPSFGIGKDFIDRTLKYDSTSSLGIYTEEGKYQEIK
DSIKKIAKNNGFLETDFIDSRIESNKAVISFIKIMGYTLTGIIGVIGFMNLVNTMITSIVTRKKELGMLQ
AIGLTNKQLVKMLNSEAMYYTSGMMIGSILFGGILGYIAVIFLKKTGLSYATYSLPIVPILLMIVCILIA
QFITTYLIGRSFNKESLIDRVRYSE
>gi|260687767|ref|YP_003218901.1| ABC transporter ATP-binding protein [Clostridium difficile R20291]
MKILYTENLSKHYGKGENLVRALDNVNLEINEGEFVAIIGKSGSGKSTLLHMIGGLDIPTSGKVYIDNKN
IFTLKEEELAVFRRRKIGFIFQSYNLIPSLNVWENVVLPIGLDGREVDESFIKELLKSLGLENKHDVLPN
TLSGGQQQRVAIARALATRPAIILADEPTGNLDSKTSDEVMSILKSMSKKYSQTLVMITHDDSIAQMADR
VIFIEDGRVSKVGDKND
>gi|260687768|ref|YP_003218902.1| two-component sensor histidine kinase [Clostridium difficile R20291]
MLKNMNLKDGLSVKDDYIMRRVIVYSVLSVLIVTLVFILFEYSRLHKLYEHQIKNTQNIAGILIEKYPND
EIDIVNSIYNSDYSKVSTGEKAFKKFGYGLENKMSNDKNFSLYLKSFFKESFFIFLMMFIVVIGIIYYFI
RYINKRLSKIYFIVDKMAQENYLKDTTESEETGYLVEYNEYFKEGTFSKINNCLYELNRSLKIKFIKLEK
EKESVKSLVTDISHQLKTPLASLKLYNTLLIEEKLEEDEANEFLLTNKASINKLENLINSLVNISRLEIS
MINIKKEDNDIKNTILNAVKSVTPKAKSKSITLNLNEFNSRIIPHDKKWTEESIFNVLDNAVKYTQVNGE
INISVEETANFFKIIIEDNGIGIEKNEFNNIFKRFYRGSADEIESVEGSGVGLYLSRKILEEQGGNIIVS
SKVGIGSKFSLFLTTM
>gi|260687769|ref|YP_003218903.1| two-component response regulator [Clostridium difficile R20291]
MMMEDIGMNNILLLEDDKSLNRGISFKLKKEGYNVFSAFGIEEAKNIFAKEEICLIISDIGLPDGSGFDF
CEEIRKKSDVYIIMLTALDEEVDIVTGYDLGADDYITKPFSLMVLISKVNALMKRVNTVKNYTLLVCDDL
FFYYIENKLIIRTDDKEEEIILSKTETKLLKYLMENSMQTLTKEQLLESLWDSSGNFVDDNTIAVNIRRL
RQKVEKNPSEPKYIKTVRGVGYMWGERSIKKC
>gi|260687770|ref|YP_003218904.1| putative membrane-associated 5'-nucleotidase/phosphoesterase [Clostridium difficile R20291]
MKIRRYLILVIIILITTSQSFISYGLERFEEITIFHTNDIHGRYAEGDDHIQIGNLATLKKETPNSILVD
AGDCLHGLPIVNMDRGKSAIELIKCAGYDYITPGNHDFNYGKDRLFELSKSANLGENTLKFLSSNIFENG
KKVFDSNDIKEIDGIKIGFFGLSTQETKNKTGFKNVEGLEFKNPIESATEQVNELKGKGANVIVAICHIG
TNSLSKPNSIDIANEVQGIDLIIDGHSHTKFENGKQVGDTLIVSAGQYLENIGEIKLTLDTNDVENIKIE
NKSVRLIGKEEALKYKLDYVVSKKVDEIKEQQEKILDKVIGATTNTLDGSYENVRTKETNLGNLISDILL
DKTKADISLFNGGNIRDTIEKGNITRRDIVDVFPFSNTIVTKELTGAQIKDVLEHGVKLYPEKSSAFLQV
GGISYYFNPKQKEGERITSIQKEGKPLDLNKKYVVATNDYIASGGDEFPCFSKEPILKEFGNLESAVIEY
IEYKKEISKNVDGRIGIKSKDELISKNHESDLILSENEKNINDNEENLSNNIKSSDSDKNKSLDKTSARE
SSNQGISKREAKEKSPKTGDLGFSNSIIIFIVSSTLICLLNFNQKELKDKKSK
>gi|260687771|ref|YP_003218905.1| putative lipoprotein [Clostridium difficile R20291]
MKVLKKITILSLITLTLVGCSNGEDKKVVEGSKKIQNSKKDEQPIIVHKDANILKDRYEPPKGFKRVDVE
KGSFESFLRNTKLKNYGEKVKYYDGRIKESKGIYDSVFDVDIGNRDLHQCADAIMLMRAEYLYQNKLYDE
ISFDFVDGFKAKYSKWAQGYRISVKDSGSSWYKATEYSTSYESFRKFMDIVFAYSGTLSLEKELEPVKVE
DMKIGDVFIVGGSPGHASIIMDMAENEKTGKKVFMIAQSYMPAQQTQLLINRKNPNLSPWYSLDFEGDLT
IPQWTFKRDQLKRF
>gi|260687772|ref|YP_003218906.1| ribonuclease Z [Clostridium difficile R20291]
MIDLTLLGCGGNVPMPNRFLSSVFINYKGRKILIDCGEGTQVSMKLKKCGFKDIDLICITHLHGDHIFGL
LGLLSTIGNSGRTSDLTIVGPVGIVDCIRSMRNLVEYVPYTLKIIENPQGNFSLDNKVLRNLEISTISLE
HSIECLGYSFNFRRNPKFDIDKATKNEVPKILWNKLQEGQNIVLNSKQYTPDMVLGELRKGVKISLTTDT
RPIESIPDFIKDSDLFICEAMYGDDLDISKAVRNKHMTFREAANLAKLGNVKQLLLTHFSPSLDIPSMYL
ENATNVFENTILGEDRLSLRLNFDE
>gi|260687773|ref|YP_003218907.1| NADH oxidase [Clostridium difficile R20291]
MKKLTRHQRRDKMRVVIIGGVAAGMSAAAKLKRIKPEYEVVVYEKTEIVSFGACGLPYFVGGFFDDADEL
LARTPEKLREAGIDLNIFREVVEVDSESKKIKVKNIKTDEIYEDYYDKLMIATGARSIMPPIKNIKLKNV
STLKSLYDGEYLKKLLSNEDNKRVTIIGAGFIGLEAVEACKKLGKDVDVIQLEDRILPQVFDKEMTDVLE
EEINRHNVNLHLDEMVVELCGEDKVEKVITNKGEIDTDVVIIATGVRPNTEFLSNTNIKMLKNGAIVVDE
YGRTSVEDIYSAGDCATIKNIVSNENVYVPLATGANKLGRIVGENLAGREVSYQGSLSSSCIKIMDMEAA
STGITEKQAKDLGINVKSKFISDYNQTHYYPGRNKIYVKLIYDADTKVILGGQVAGFKDAVQRANVLAAA
IFGKMTTSQLGMLDLCYAPPFARTWDVLNVAGNVSK
>gi|260687774|ref|YP_003218908.1| sodium:dicarboxylate symporter family protein [Clostridium difficile R20291]
MITDFKTIFFIILLLGTFFIVRQFEKKKIKFSLRTIYATVLGLILGIIIQAFAGFPNDTTQVTWLQEVSK
WYSLFGSGFMDLLKMLVVPLVFLSIIKVIINMKDNNLGTLTFKSLGMLLATTAIAAIVGIIVANIMKLGV
GANMPTLVENQELKEINSLVDTLRGLLPSNPVMAMANGNIVATIIFATFIATSIKRLSKKHFETIKPFID
FIEASYKIIVSVSMTVIKFMPYAVVALLANTITSQGISSIVSVLQFILALYISVAILFTIHLIFITLNGL
NPITYIRNSTEALLLAFTSRSSLGTLPVTIESLVQNHGVDEGVSSFTASLGANMGMNGCAGIYPALMAVT
LANMAGVNMDMSLYVMLLIVITISSFGIAGLPGTATMAVSVVISGVGLGSYFPLVGGILAIDPILDMGRT
MINVNGAMVSSITVGKSLGKIDKEVFGKKNIS
>gi|260687775|ref|YP_003218909.1| hypothetical protein CDR20291_2429 [Clostridium difficile R20291]
MNRFFKVRLITAIMFLIILFAFSIFNICYSGKDMIQEIKNSVAEKSSLKDTISSIDNTVNDKVIYKNTFI
ETYGYLQKLMGKNEFSKFSVVKDTSGKMHYTYFAKAPNPVGVIADRVRKFSEEMEKQNTKLVYLMTPDKY
IKGVTKFPKGIPYSYSNETADNFLNQLKKYNVDYIDFRENILKSGIPKDDLFFKTDHHWKVETSFWAFGE
LVEQLNKKYNMNLDENHYYRDKENYNSIVYPKSFLGSMGRKTGILYGGIDDFTLIYPKFKTNYTYYTDSK
SQKFELKGRFEESLILSYPFNADLDLMDGQSDKYFTYLLGNRPLVKIKNIENPDGLKVLFVKDSLIVPTA
AFFSSVCSSIDMIDPRYYDGDILEYAKSHDYDFVFISVYPQNLTKEFFPFCK
>gi|260687776|ref|YP_003218910.1| putative polysaccharide O-acetylase [Clostridium difficile R20291]
MLFSSLIFLFYFLPITLVLYYVFRFNRTIQNMILLAVSLFFYAWGEPKFVVIMIVSIIMNYIFGLLVDRY
RESKIKVKVFLVLMCVYNIGVLFIFKYLAFALRNISELINTELTIPSIVLPIGISFFTFQGMSYVIDVYR
RHGEVQKNPFYVGLYIAFFPQLIAGPIVRYESVAEQILNRKETWNKFSIGTCRFITGLGKKVLISNNMAI
VADYIYTMNSQGEIAASLAWLGSIAYTMQIFFDFSAYSDMAIGLGLMFGFKFEENFNYPYISKSISEFWR
RWHISLGMWFKSYIYFPLGGSRVANKDIMIRNMFIVWLFTGIWHGAEWTFVIWGILNFVFLIIERFIMFE
KIENHNFIKHIYALLVVNFGWVLFRSPNLKEAYNYFKAMLGGNGVIWSDYTYMFLKEYWVFFIFAFIFSV
PIAKKINKFVVEQAKYSMIFNVFYPISAILLFFISVTYLVTGSYNPFIYFNF
>gi|260687777|ref|YP_003218911.1| hypothetical protein CDR20291_2431 [Clostridium difficile R20291]
MSLNPWNIFRRDEMKTLKVFFCSAKYLILVFIFFINTTFISSATSDKILDLSFKKIETDLSSRITYEDTG
VKIETDSSKSDKERYLYIYQNIKENWSMYNNFYIEIQNKNKSSQKINLSIQSKNMLEFRLKEGSEIFLED
KNIIYSDKIKEGCIEVPGEFEGKIYVNFNSLINEKSNVVLDSSMLSNIVSWGITFIPSDEEHNIVIIKKI
SLLSEEKLSFLHNIKITGNEEVQIPVLGQSISQYEVLGLKRDSKIKYSLMGKQDNVSISQNGKLTLSNKA
EPGQIILQVNVDDKFKIGRKIALTESWSINKKDKDGVPYTLVSPEQSPTVQYMKKINFMNNIITFVRILF
VSLVIICFGIYLYWKKCSKTK
>gi|260687778|ref|YP_003218912.1| cellulose synthase catalytic subunit [UDP-forming] [Clostridium difficile R20291]
MKKNSKKILITLTIITNIVYILWRIFYTVPKEEGMFALICAIILLFVEIMGMMEMFVHYYGMSNIEYPEK
PVISEELYPHVDVFIATYNESVDLVRKTVNGCIHMQYPDKKKVHIYICDDGNREEMRILAEKMGVNYITR
TEREGAKAGNLNNAMQHTNSPLIATFDADMIPMHDFLIATVPYFLKNEQAKKDGEKEEYEKVGFVQTPQS
FYNPDLFQFNLHSEGRIPNEQDYFYRDIQLARNRTNSVIYGGSNTVISREALEEVDGFYTYSITEDFATG
ILIQSKGYRCYAIPEVHASGLSPTDLKSLIKQRERWARGCIQTGRRLNILFRRGLGFWQKISYISSITYW
YASIKRFVYIMAPILFSVFNVIVVKCTLLQVLVFWLPMYILSSLSLKIFSQNIRNTRWTNIYETIMFQSL
MPAVILETFAISKNKFSVTNKNKLEENRMYKFLQGIPYFIYMVLSIIGILKMFVAIFKMSSMTYSVVLFW
LIGNLFNLVMATLFISGRQQLRKSERYIAEIDFKLKQNSYVLSSKTIDISENGFAFLLENPEYISPEEEF
EVEFREKSGNEMYIANMKAKIVNVVEVNSKWKYAAYITHIEDSEIDNWMCIVHDRIPTLPMTISNQLGFF
DDLQINVKKRIEKIRTLSRRSPRINMNFQMDIKNTGKLRIVNFNYQYVLLNFENKNIYPKEIALEINENI
VLECDLCEGKIDERGLLYKVNNIDSIMQNFFLRDEMMDWILQNKTIPVSNPSEKKEKSIDEFEPMEYI
>gi|260687779|ref|YP_003218913.1| endoglucanase (cellulase) [Clostridium difficile R20291]
MNNIIWKITLFGGINIKRIGIIIMFFLSIAFIGFYLAIRGNSDTVKMQRGINIGNALESPKDFPWDVKMS
NKFFDDIKDAGFDTVRIPVRFSDYTSDSDNFKIDEEFFKKIDKYVDYALDKDLIVVLDLHHFEEIMKEPR
VHKEEFLKIWQQIANRYQKYDKKLVFELLNEPKENLSSQLLNEYIEEAIKIIRKTNPKRTIIVGPYNFYQ
IDYLNELNVPKDSNIVVSFHYYEPNDFAFQGNIYHNGFEHLSNITWEGTNEQMDYLKKRFDIVENWANKN
KVKIFLGEFGVTKEAPEASRRAWIKAVREEAEKRNFSWAYWELASGFGIYNQIEGTWDRDILSALIEKR
>gi|260687780|ref|YP_003218914.1| hypothetical protein CDR20291_2434 [Clostridium difficile R20291]
MEISYVLKDCTFKHNKYSVIEAETWKEKDLDIVVAKGEKFAFQIMLKATEEFNCTIDKSSTISWKGLENR
VRLALNVPNSLENNFSINILGYVQDDTKAFVNDAILRDKDVLVEQYLPQTFWIEGQVPEDFEENNLNIGI
DIFKSFGYEDEEKVCTIDVPVKVRNVVLKPLDKSKFFLDLWQHPSCLARMYKVELWSDIHFEIVDNYLKE
LASLGEKVATVIVSDYPWAGQSCYKVYKNPSNLYEYNMVSVSKGLDGKIKCNFESMDRYISIADKYKMSK
EIDLFGLLGNWCAGEFGNPVEGYKDPIRVRYFDENDKVFKFINNTNDLKEYIGLVLNHLIECGLWDRVRI
IADEPNNPEVVKECIEFINSTVGTHQVKYKSATHDQNFLDRAKDEIDDMSINLKLTIQNYKDIENLKKKI
NDKGGILTWFVCCFPEKPNSFLSSPFVENRIIGWYTYYFGLDGFLRWDYNLWTEDPWKDSSYKFPIWKAG
DMFFVYPGKDLKPVRSVRMENLRFGIQDFELFTMLEKEKGREYIEVELMQELLNKKENAEIKGFGDIELG
YSLDNWGYDKVKKYVLELLDRV
>gi|260687781|ref|YP_003218915.1| putative sugar transporter, permease protein [Clostridium difficile R20291]
MKTARRLLSDGLLLFIACASLVPFIYMLIISLKITYNSYSLDISFSTVTLQNYIDIFTKKGFAQYFFNTA
IVSFSGVLLNLVFSTLAGYSFAKMDFKGSDKLFLFMIMTLIIPSQVTMIPLYIIMKHLGWINSYLALIMP
IPTAFGVFIMRQAILGVPKELLESAKIDGCSDFRILIQIVLPLIKPALITLAIFTFMGAWNEFMWPLIAT
TKDAMRTLTVGLSTLKTFQITNYGQMMAGATITFLPPFIFYLILQSKFVEGVSLSGIKG
>gi|260687782|ref|YP_003218916.1| putative sugar transporter, permease protein [Clostridium difficile R20291]
MENLVREFEENSKRKKTKLNIKPYMYILPLGIILVAFYVIPIIMSIYFSFTKYNIISPATFIGLENYKKL
FTDETLKVSIINTIKFTVVVVPCQTILSLILAVWITGKGNSKIASFAKGAIFIPVLSSMVLIGMVWRALL
NGEGSIIYQVLGAFGIESSKLLGDSKTALPTLMFISMWKNIGYFMVIYISAIMNLPKHCYEVAKVDGATK
LQEFIKITVPLLKPTTIMVVFLGSIWSLQVFDLIYTVTGGGPGISTMSIVMHAFNLNFKNFNSGYAMTVA
NVLFLLIAVVSILQNKLVKRDNSDF
>gi|260687783|ref|YP_003218917.1| putative sugar transporter, substrate-binding lipoprotein [Clostridium difficile R20291]
MKKENKMEGIKVGMLKKLCSLAMVAIMTTTLITGCSSGNGKDSKKDGEKEKLVLWMPPVENNMKEVWDPI
LDKFEEKNNCEVDLQIIPWDNYSEKFATAISAGEGPDVGYMYAEMYPQFIESGAVEDLTNYATKEDKEQS
IYIKTSEMMGGMYGMPFQAANPGVLYYNKDILEKLGEKPPKTWEDFKRICKKATQDTDGDGKIDQWGLAQ
GWGAKTFGNLNWNWYPYLWQAGGDIFNDDLKSVKFNDKSGLEAANFLKELQAYVPEDSLSKDSNEMIESV
FGPGKAAFTIMLSSAATSVFDESFPDLNWGFVTGLEDKKAATFGAVDHLSLMSSAKNKELAYKLIQHMLS
VESMTEFHKAIPRAPITKGEPYQGDERFKEMVENDKNVYRPLVVGPHGVEIYEYLWKELQTMISGDKTPK
QALDDAAKYSNDLLAQ
>gi|260687784|ref|YP_003218918.1| putative phosphosugar isomerase/binding protein [Clostridium difficile R20291]
MKFKYIDEIRRLIDIIENEEKVNMEKAVQILVEAIESKNAIFSFGASHAGILTEELFYRAGGCVLINPVF
AKSLMLDTAPITHTSKMERLEGYGTALADKTPIKKGDVVIVHSVSGRNPVSIEFAMKAKENKAIVICITN
LSYSKSVSSRHSSGKKLYEVCDLVIDNHGQKGDACVEIDGLNQKVSPTSTVIATTVMNSIIAQATQELVN
KGLKNPPIFYSANIDGGDELNKKIFDEYKSVIHYEY
>gi|260687785|ref|YP_003218919.1| phosphotransferase system, C component [Clostridium difficile R20291]
MLDFISNNILRNPSMLIGLIAAFGLVLQKKKASDVIKGSLLAAFGIIIMETGTGMLVSSIAPINGAFQSI
SGGAVTKGLSDVTFTASYGGIIGLAMFAGLAIHLMIARFTPIKTIFLTGHMLYWFPFIFVASGVEAGLNG
GVLIAFAAVLSALYWSIMPWLLRKYVFDVIGDDSFTLGHPSGCLALISGFVAKLVGNKEKSTEDINIPQS
LSFFREISISGGMAVFLMFIVVGIVIPGAFKDSNEFIGTYAIKQGLSFGAGLIIMLHGVRMLINQIMPAF
QGISEKVVPNALPAFDCPILFNYKPNAVLIGFLVAMLTSTAMILICNYFNVFNLLLIPLVITSFFECGAA
AVIGESQGGIRGAIIGTAIAAIFMVVLVGISAVIYSGTIQNWILIFGGNDLSLFGIISKFIGSLFGGIL
>gi|260687786|ref|YP_003218920.1| phosphotransferase system, B component [Clostridium difficile R20291]
MKILAVCGFGVGSSMVLKMTIQKALKQLGIECEVENTDINSARGADCDCIFTSQELLNELKGTCNVDVYP
VKKYMDLAEVTEVVQTFLSDKNDKK
>gi|260687787|ref|YP_003218921.1| putative bifunctional protein [includes B component of phosphotransferase system and transcriptional antiterminator] [Clostridium difficile R20291]
MKERAKKILDFIIKNNNVTSQELQERFNVSKRTIYYDILAINEQLGKSGNIKNVKHKFIFEGNLCDARKI
ISTEEDKFLDSDYRKTFILNKILLGEKISIEKLTNEMLLSKNTVVQTITDVKKYLQTMGLRLEYKGKYKI
IGDEYVIRELFLIIVQENVLEINSISKEVSSFDTKGHIKLTDYSLLNLTKFVEFLNKRIRDGKTLYSYKY
LNEAKKISYFSNCKELLCEEANENEQAYICTYISSLPSLNSEVKEDVVEEYVDKLIDKFEVNTAIKLESK
HEFKKNILRHLHSSYNRIRFKFPIRNPMLDETKYKHESLYKIIKSIIENEEEFPVFEGIREEEIGFIAAY
FGGYLRGSRDNGLRRNKVLLVCPNGLMVSKSLEIQLYKYIPTIEIVGIVSIKQLKEVNVYYDYIITTIDI
QNVNNVIVVNPLLTSSDVQLLMNKLISVKENEKYFNLELIIQAIRKNGVINNEEALKADLLNIIHKIDEG
EMYQPMLKELINAERVNIIKSVRDWKEAIKIASKPLLEDNSIEELYIENMIKSVEKYGPYIVLADRFALP
HASSKEGVNKLAMSLLIVEDEVDLLGKPVNIFMVLAAVDNTTHIRALASLSEMMYEEENVKLIINGDKSS
ILELINKQN
>gi|260687788|ref|YP_003218922.1| hypothetical protein CDR20291_2442 [Clostridium difficile R20291]
MKIDLEMIELFEQLEEIFRSASTIPFSHKCTVDKDEVLAIINDIRTLIPEEVTQAVWINKERNKIISQAK
QDATNIVEQAKKEAERIQQEYQDNIEELKKNSEDVVKAYVESSEPVVQADQRAKDIVDRAERIANEIRIG
SIEYAEDVLSSVEYNLREILEEVKRDKAELRPKK
>gi|260687789|ref|YP_003218923.1| phosphopantetheine adenylyltransferase [Clostridium difficile R20291]
MENKPRKAIFAGSFDPITNGHLDIICRASKLFDELQIGVLNNPNKKGLFSFDERVKLIEKSTSHLNNIKV
VTFDGLLINYCQENGIGALVRGVRSGADVDYELQMAHMNRELNPDIETIILPSCTKYSFISSSLIKEVLL
FDADIKNLVPKIVLEELKKKTSGGN
>gi|260687790|ref|YP_003218924.1| hypothetical protein CDR20291_2444 [Clostridium difficile R20291]
MRVISGKARGLKLNTPKNEDVRPTTDRVKESLFNMINSYIMESEVLDLFAGTGSLGIECLSRGAKSCTFV
DISKESIDIVKSNVKKARVESESIILNLDFKTAIDKLKLQNSKFDIIFMDPPYYKNMFIEAIEKIDNSNL
LNEDGIIVVEHDTNDLFPDKICKLEKTRDKKYGNTTLTFYKMEA
>gi|260687791|ref|YP_003218925.1| ATP-dependent DNA helicase [Clostridium difficile R20291]
MIYLLDLYKDVQYVKGIGPKKADKLNKLGIFTLKDLLYYFPRQFEDRNNLKKIAQLEDGEKVTIKAVISS
INTFSPKEGMTLTKIDVKDETGSAKLVFFNKSYIKNTFRPGDSILVFGKVKKKFNNLELTSCELEYLTNS
PKNTCRFMPVYQLTYGVTNKEIMSIIRTVLEDKELIIQEYMPQRIIEKYRLCSIDFAVRNIHSPSSKESL
KIALYRIVFEELLILQLGLFVFKSGRNKEDGIKFETSKDLKKIISALPFKLTKAQNRALDEIIQDMNLEK
IMNRLVQGDVGSGKTVVALLALANCVLNGYQGALMAPTEILAGQHYISLTESLKDFGINVGLLIGSLTKK
QKDTVLEQIRNNEIDILIGTHALIEDKVEFNNIGLVITDEQHRFGVMQRSKLSLKGANPDILVMTATPIP
RTLALILYGDLDISIIDELPPGRQPIETIAIEKSKRDRAYNNLVRREVESGRQVYIVCPLVEESEAIEAK
SAVELVEELRAEYFHDLRLGLLHGKMKSSEKDEVMERFKNKEIDILVSTTVIEVGVNVPNATLMIIENAE
RFGLAQLHQLRGRVGRGSHKSYCVLIYDSKTDVCRQRMAIMEETNDGFKISEKDLEIRGPGEFFGTRQHG
LPELKVANLFKHIKILKLAQQEARYILGEDNNLQLKENMALKKEIIDKFKDTLKEISLN
>gi|260687792|ref|YP_003218926.1| putative phosphatase [Clostridium difficile R20291]
MIQYIDGKRLREMFISGANNLQNNKELVDKLNVFPVPDGDTGTNMSLTISYALKELAKVENDNISDIGKA
LSKGSLMGARGNSGVILSQIIRGIAKSIEGKSKLSTEDLAKAFKNGSDTAYKAVIKPIEGTILTVVRESG
EFAIKTAKKEKDVVKFLSMLVKESNSSLERTPDLLKNLKEAGVVDSGGKGLVLIYEGMLASIKGDNIEIK
NVDLDTNISTSMDFAKSTTSTDDIKYCYCTEFILESSKVEDTKIRDIMMAYGDSLAVVGDDGVIKVHVHT
NDPGNVLQEALKYGQLLTIKIENMKLQHENTLLDVEEKKENDSEPLEEEKEFGFIATSMGEGLANIFKDF
GVDHIIEGGQTMNPSTEDFMNAIKHINAKNIFIFPNNSNIIMAANQAKELSDKNIIVIPTKNTPQGFAAL
VTFNGELSEDENKEAMMNALNSVKSGQVTFAVRDTVMNEIDVKEGNIIGIAEGNLLSAGDYVDEVTSNLI
EKLVDEDTAIITLFFGEDVTESQANELRTSLEEKFEDVDVELYYGGQPLYYYLISVE
>gi|260687793|ref|YP_003218927.1| hypothetical protein CDR20291_2447 [Clostridium difficile R20291]
MSAKVTNQYGNIEIDNQVIAQVVYRAAMESYGLVGLAYKSKGIVELLKGENATKGVRVEEVEEDAIAIEL
YVIIQYGTNISTVANNIIDRVKYVVEKMTGVRVTRIDINVQGIRVK
>gi|260687794|ref|YP_003218928.1| 50S ribosomal protein L28 [Clostridium difficile R20291]
MAKVCSVCDKGKVSGNQVSHSNKHNKRTWSANLRSVRAIIDGAPKRVKVCTRCLRSGKIERA
>gi|260687795|ref|YP_003218929.1| hypothetical protein CDR20291_2449 [Clostridium difficile R20291]
MNLKRSNEKREEYRRMYSDKESFLSLIQNFTSVSIAKELTLKNIELETSFICEYKGKEVDIIYKVFSKSG
KVSHYIVLEFQTEMDTEIVPRLKSYREQIWKSFIMKKSLEEIEDKNFKLPKVIPVVLYSGPERLSRKKGI
LDIVESISEFSNNSSMKN
>gi|260687796|ref|YP_003218930.1| MerR-family transcriptional regulator [Clostridium difficile R20291]
MEYTVQKLSKLAGISTRTLRYYDEIGLLKPLKINSSGYRIYGQNEVNKLQQILFYRELGINLENIKNIIN
SPNFDSLSALKEHHNKLLAKRKQIDLLIENVTKTIALKEGKYTMTDIEKFEGFKEKMIDENEKNYGTEIR
EKYGKDIIDTSNKKLKNMSKQDYENWQNLNIEIISKLKKAFKTGDASSELAQEVAKLHHKWLSYTWNTYS
KEAHSSLAQMYVYDERFTSYYDREQPGLAKFLRDAIVIYTRDK
>gi|260687797|ref|YP_003218931.1| putative transcriptional antiterminator [Clostridium difficile R20291]
MHKRLLTLFKLLNESDDKITCKTLSNHLKVSERTIRNDITSINGTLEKNGAIIKIKKGEGYYIDILNLAL
YQQYLALISDDIMDSSEIPDSPIERNQYILKYILYNNTYIKLEDLANSLYVSKFTILNDIKRIKPILSKY
NLILVSKPYYGVKVEGKEIDIRRCISNNMINRNFENYIIGITDREIELFNNVDLIELQRVVLSEINKFNI
NFLDFNLKNFIIHLAITISRILDGYCLDNVLDVVLTDFQSNTTVENIFNYIESKYTIIISKADRVYLYNH
FITKSSLLDNVSNRVDTKIIEYVEEILEVINNQYTFDLRNDSVLFDDLVLHFKSILNSKSYNLNKVNPLI
NTIKSNYPLAFEITLNAIEKVFKNSIYSLTEDEIGYVSLHIGAGIERFFQNNIKCKNVVLVCGSGYGSSR
LLEVQLNKVFHDKINILQCLSFNQFLASELSDVDIIISTIPLNHDSIPIVLVDLKLLKKDIENISKSITN
NSHIYSNLLDNFFDKNLFIVNPKIKDKDELIKLMCNKLTQSEIVFPSFAESVFYRESLSSTNIDDFLAIP
HPMELSSIRTKICISILNEPIYWSEDSTVKLIMMLAINKDDYIKINSIYDILLKIIHDNDIRDSISNCND
FDNFLSIIKSIV
>gi|260687798|ref|YP_003218932.1| PTS system, IIa component [Clostridium difficile R20291]
MVLQEKYIFIDKDLKSKEEVLNFIADSAYILGIATNKEALLKDLLKRENEFPTGIKDGFAIPHTKSVNVK
EASILYIKTTNELEWKTLDDSKVRYVFSLLAPHKNEGNIHLKTLSKLATCLMEDDFTSEVKNASDASHLV
KYITNKMKEE
>gi|260687799|ref|YP_003218933.1| PTS system, IIb component [Clostridium difficile R20291]
MKIVAITSCIAGLAHTPMAAKALEQAASKMGHEIKVEQQGAMGRVNTITKEEAQDADFILIASDQTISGM
ERFDGKKVIKVKIGIALKKPEAVLTKCIEAIS
>gi|260687800|ref|YP_003218934.1| PTS system, IIC component [Clostridium difficile R20291]
MSKKNKSLLSELKGHLMTGISYMLPLVIGSSLVVAIPKLTALAMGITSLDAYKNVSGFYHILYLMEQVGW
TGIGLLNTVLAGFIAFSIGEKPAMGAGFIGGLIASNTNAGFLGAVIAGFFAGYVCKFLKKKIKISGSASG
MMPLIIMPLITVGLTGFLMSVVLAGPLGNINTSLNAWVAEMCQNGTNSVVLALILGAMIGFDLGGPVNKA
AWMAGNALLLEGIYLPAILVNCAIVIPPLGYGLATFIRKSKFSNALAETGKGNIVMGIIGITEGAIPFTL
TNPLKLVPVNMIGCALGVGLSALLGVHAIMPPVGGLYGFISIGSGWAYLVGAIFGALVIAILSTTLVDFN
EDETTENTEFDEIELDIM
>gi|260687801|ref|YP_003218935.1| putative glycosyl hydrolase [Clostridium difficile R20291]
MKKTKVHVVPHSHWDREWYFTTSRSKIYLMKDFQDILDILEEKEDFKYFTMDAQASLLDDYLKWRPQDEY
RIRDLVQRRRLVIGPWYTQTDQLVISGESIIRNLYYGIDRCNEFGEPMRVGYVPDSFGQSAQMPQIYRGF
GIDSSLFWRGVSDDMVDTTEFIWKGSDGSKVLAVQIPFGYYYGGNIPEDDSDLKEYLKDIIGKLKVKAST
NNVYFPNGFDQAPIRKNLPDILKKANEIDNENEYEISNIENYIDSVKNERNEFTELKGEFLNAKHMRIHK
SIFSSRSDLKIMNNKLENYITNVLEPLLTLSYSLGNEYPHLVIKDIWKLMFENAAHDSIGSCNSDTANED
VYTRYKQARDLSINLLDLHMRLISTQIKNNNEEITLTVFNGFPEVRNEVVEFDTYIPGQDFVIKNKNGEI
LNYIIKEKEDITNYILTQTIRLNPSKKIYIPKTVYRAKIALSVKDIPPMGYTQLVFELDTKNKCEIETSN
CKEIENKYYKITANKNGSLEILDKESSKTYKNQAVIEDNGDDGDSYNYSPPRKDIYVSSLDSVSSVEVLK
SNIQEEMILKYSLTIPASLEERSIGKVSVKMPVTMKITLEPKEQIIKFNVNIKNNQALSHRVRVLFNTEI
ASKFSIADQQFGIIQRPTVLEKDLALWKRDNYSWQEKPITIEPMQSFVTLEDGQRGIALITGCVREYQIV
GDNLDTIALTLFRSFGYMGRENLLYRPGRASGEKIIATPDAQLLKELNFDFGLYIYNNKFDEANVANTAK
RFLTPIQIYEYADFLNGRLLFAFNDEKQIYENEFSLMNVNNSNFTVSAIKKEEKGDGIVVRIFNGMKNED
AKGSLNINKNVNDAYSAMLDEIYDNNSKLKVNTKTVEVNSLSHCKVQTIVIK
>gi|260687802|ref|YP_003218936.1| two-component sensor histidine kinase [Clostridium difficile R20291]
MLDTKLKKFKDKYIVTIIVFILMLSASLGMISQYSTIQAGAKGGAKNPFEQESFVDSIYKGSYVLYHNMK
EEQEGKMIQPSKLFINEETMNYIKNVSKEKDTYDGSETYYTDDSINADFNENFENWEHFIKASGKNLKYY
LVDKESNFEFFNDNKELGVLDTTKNDASKENSDENQSKNTEMNDEERQKQITDIKENYRFYVVMNFDKDG
KVNIVDSYGVNQKVINQMLLSKAREDLMDTSLGGNSISYKLSPIKNITLVYAVPKVISKGDSVEYGYGNT
YFDDGIISYISNVENNSYYKISGMILKIILAIVVIVALAFPYRKSKELLGFDTLLRIPLEILFIALAIIQ
GLVDLYPTVIISNTLSGNYVEYLINNDISAKMASILVSLMNLTYWFVIFSIIFVFIILLKHILNVGIREY
FTKHTVTGMFFVWLKKAGKTVINQIRTINLKEKPNKTIVTILGINLLIIVIMCSMWFFGIILALIYSVVL
FKILSDYSKKTIYEYNQLLDVTKKISDGNLDVNMEKDLGFFNPIKDELGNIQTGFKKAVDEEVKSQKMKT
ELISNVSHDLKTPLTSIITYIDLLKDESITDENRKLYIDTLDRKSQRLQHLIEDLFEVSKANSGDVYLNI
VNVDIVSLMKQTLLELDDKLADSSLIVKNNFSNEKIILPLDSQRTFRVFENLIINISKYAMPNSRVYIDI
LETDNKVNIMLKNMSASEIDFSVDDIMERFVRGDKSRNTEGSGLGLAIAKSFIELQGGKMNISVDGDLFK
VTITFNKN
>gi|260687803|ref|YP_003218937.1| two-component response regulator [Clostridium difficile R20291]
MNSYNILVVEDEKEIADAIEIYLLNQGYNVFKGYNGLEGLKVIENQEIHLAIVDIMMPKMDGITLTMRLR
ENYNFPVIMLSAKSEEVDKIMGLNIGADDYVTKPFKPLELLARVNSQLRRYTKYLNMVGNKEQKVESDDS
VFAIGGLELNENTKEVNIDGKYIKTTPIEFKILSLLMRNAGRVFSADEIYERVWNENAINTDTVMVHVRN
IREKIEIDPKNPKYLKVVWGVGYKIEKI
>gi|260687804|ref|YP_003218938.1| putative nitroreductase [Clostridium difficile R20291]
MELQDTIFKRQSVRKFKNQDVSDEDILKMIKAAGAAPSGKNIQNWHFVVIKRRDLMEKIADVITKKQQEI
LVEMDKVSVDKANRFRKFVKNFTLFYLKAPVLVLVFTKVYNPSGYYELELIDAPKETIDKLFIRNPGMQS
LGASIENFTLSAIELGYGSCWLTSQNYAADEIEAVLEAETGFEKGEYFLGAMLALGVPEDNLKSPSKKPV
EEICTFIK
>gi|260687805|ref|YP_003218939.1| putative hydrolase [Clostridium difficile R20291]
MVDSIIFDLDGTLWDSTEEVCKVWQDVLSKHKEIELSVTKDLFRSLMGLSFEEIANRLFPNLSEEERMNL
LNECSLKECDYLSENGAKLFDDIEDTLKLLSKKYKLFIVSNCQAGYIESFLKAHKLEQYFIDFECPGNTG
LHKGENNKLIIERNKLINPIYVGDTQGDANSAKFVGIPFIYAKYGFGNVDVYDYFIDSFKDLLEHDILK
>gi|260687806|ref|YP_003218940.1| putative thiamine pyrophosphokinase [Clostridium difficile R20291]
MKICIVLNGEIEDYEVTRDIIIKECYDCIICADGGANHTYKMEIMPDYILGDLDSVEEEKINFYKNKGVK
FEKFPSKKDETDTELCLFLAKTLKANHIDFFGALGGRIDHTLANIKLLYYLKEDGIYSRILSDKEEMYIV
ENEEISLYGNPGDTVSVTAIKGDAKGVTLTGLEYPLDNYYMKYSVPIGISNVMLSNSCKIKVEQGCVLVV
RNL
>gi|260687807|ref|YP_003218941.1| ribulose-phosphate 3-epimerase [Clostridium difficile R20291]
MIKLAPSILSADFAKLLEDVRKVESAGCEYLHIDVMDGHFVPNITLGPLVVKSLKKENINMVFDAHLMIE
NPDQYIEEFVKAGCDIITVHQEACVHLHRTIQNIKSHGIKAGVVLNPATPVDTIKHVLPDLDMVLLMSVN
PGFGGQSFIPCVLDKIKELKAIIDSQGLNIDIEVDGGISPKNVAEVVQAGANVIVAGSAIFGSDDIQETV
NLFRKNASLEELV
>gi|260687808|ref|YP_003218942.1| putative ATP/GTP-binding protein [Clostridium difficile R20291]
MCLYKFYKGRHLMLEGKIIKGISGFYYVDTYNGIYECKARGIFRKQKITPLVGDRVKISIVDEDEKKGIL
EEIDSRDTELIRPPIANVDKALIVFAIKNPKPNLSLLDRFIVLAEKENLETVIILTKADLDDNDTLETVK
NIYELSGYKVIPVSNITKLNIDKVKEELKENVVVFAGPSGVGKSSLLNEIDENFKLQTGVVSDKIKRGKH
TTRHAELLKLEFGGMVADTPGFSSLALEDIEEVELKDYFIEFDKFNDCKFGSKCIHENEPNCAIKEAVTN
GEISKERYDSYIQLLHEIRQNNSRRY
>gi|260687809|ref|YP_003218943.1| putative short chain dehydrogenase [Clostridium difficile R20291]
MKKKTVLITGGARGIGKAMSKAFAKEGYNVLVNFNKSENEAKELYTILNEKNFSVKLFKADISNREDVEN
MVDYCIKEFGGLDVLVNNAGVSQDKLFTDITDEDWDNMMNINLKGSFYCSQVALKYMISEKKGNIINISS
IWGISGASCEVHYSITKAGIIGMTKALAKEVGPSNIRVNSIAPGVINTDMLSGYNEEDIDALVEETPLMR
LGTPEDIANCAIFLASDKSNFITGQVISPNGGFVI
>gi|260687810|ref|YP_003218944.1| serine/threonine-protein kinase and phosphatase [Clostridium difficile R20291]
MGDTILGNRYEIIRKIGDGGMAFVYEAKDRLLNRTVALKVLRPEFVDDDEFLTKFKREAEAVASLSHPNI
VNVYDVGEDGKVHYIVMEFVDGKNLKEIIQDEGILDEYTALDITKQIAMALSAAHKKGIIHRDIKPHNIL
ISNEGRVVKVADFGIAKAVSNSTMTNIGSIIGSVHYFSPEQAKGKFVTNNADLYSLGIVLYEMLIGKVPF
RGDSPISIALQHINDDIDFTSEEKVRIPQSVRTTIKKLTEKSSADRYQTAEELIEDIEYIEKNIDLDFIK
EYDDFATKKIDEKEINKVVNPTLAKPAPEKVVKPVEVADLDDDEDYYDDFYEEDEEEEEEEEEIMRAKKN
QRPKSTPSKRTKKKKKKQESPKSRRRLKVIAAVLILILCAQVFLAYKFLFAGGFGNKSLTVPNLVNMTLE
EAQSAVEKEGLYLSVKSEEYNSEVDENCIISQTPEGGSTNVKKGDTINVVVSKGSSQASVPNVVGLTLSN
AKQLIEENNLKVGTVKYEYSSIYKEGTVLSQSPGAGSSRAQEGDEVNLYVSKGSEKSNTQTPTVPDKKPT
TPENNTPTEPGSNSGNSGGNSGSSNSGNSGGNSGNNGGNSGGSNSGNSGGSSGGSNSGDNGGSSGGSNSG
DNGGSSGGSNSGDNGDSSGGSNSGDNGGTSSGTGANIGKTE
>gi|260687811|ref|YP_003218945.1| serine/threonine phosphatase [Clostridium difficile R20291]
MVYSCASHIGKIRKNNEDYCEGEVIDTEHGPIGIFAIADGMGGHKKGEVASKLAVENIIDFLKENLLQHD
NVKIDYIDDILKQAYNNVNSIVHKKSMEDIEFEGMGTTLVTAIVYNNVLYVANVGDSRCYLLTDEKFDKI
TIDHSVVEELMMAHVITEEEARRHPQRNRITRAIGTDDMVVVDIFKKEIKKSDIILLATDGLTGFIDDED
IRDLILDYEYERTSNISEELISMANDVSGKDNVSVIVIKV
>gi|260687812|ref|YP_003218946.1| radical SAM protein [Clostridium difficile R20291]
MEKKKIVLKNFTEDELKEFMKTIDEKPFRGSQIFSWIYKGAKTFDDMNNIPKSLRNKLEEVSCIGNIDIE
LKLESKVDNTKKYLFLLDDGNIIETVMMDYDSRVTVCVSNQVGCRMGCNFCASTMDGLIRNLEPWEILDQ
VIKIQEDTGKRVSNLVLMGSGEPLDNFENTKQFLKIINEKNGLNIGYRHITLSTCGIVPKMYELADLEIA
INLALSLHSPYDEERRKIMPVANAYSIEEILNACRYYIKKTNRRVTFEYSLIKGVNDSEKEAKALAKLLK
GMLCHVNLIPINKVEEREYEKPDKAFIYKFRDSLEKNNIPATVRMSMGSDISGACGQLRRKYK
>gi|260687813|ref|YP_003218947.1| ribosomal RNA small subunit methyltransferase [Clostridium difficile R20291]
MDAREVGFKVLCDIEKNDNYSNIAINKHFKNLEISDMDRGLATELIYGVIENKYYLDYIINKLSKIKVKK
MSTYVKIFLRMGTYQILFLDSISDYAAVNETVKLSKKYDKKSSGFINAILRNEIRAKETIMDITEEDSVK
YLSIKYSYNSWIIKNWIDKFGQEFAEDLLEANNEKPSIYIRTNTLKISREELIEKLSEMGIVCLKVPMVE
EAIKVEKMKNIEKNELFKAGLFTIQDISSMIVGKVINPKEGSFVLDVCSAPGGKSTHLATLMNNTGQVVA
RDIFEHKLKLINSTVNRLGLKNVFVERFDASEIDENSISKFDYVLADVPCSGFGIIRRKPEIKYKKEEEL
KDITSIQKKILENASKYVKVGGTLVYSTCTIQDVENINIVTSFVEENHNFEFVPIDTVNVDLDNQDKGYL
KIYPNIHGIDGFFIAKLKRIR
>gi|260687814|ref|YP_003218948.1| putative membrane-associated neutral zinc metallopeptidase [Clostridium difficile R20291]
MYPVYGGFWGFDPTMVVLIPAILLTIYAQFKVSSTTNKYLRVNTRRGYTGEQTARRVLDSNGLYDVKIEM
VRGHLSDHYDPRRKAVRLSEDVYYGTSITSVAVAAHECGHAIQHAKGYAPLQIRSSLVPVVNFASSISWF
LIFLGFIMAGPFLKIGILLFSASVLFQIITLPVEFNASSRAIVQLGNLGIIDESESRQSRRVLSAAALTY
VAAALVSILQLLRLLLIAQRRND
>gi|260687815|ref|YP_003218949.1| hypothetical protein CDR20291_2469 [Clostridium difficile R20291]
MTDIKKYLTSVGILILILGILIGVVNFFIISLTQIFSLMINIIIISLILIILCSTAVTYRVIKGKYVNSN
IMKINFNIVSGLFPIISFIASSFGMSKSDIRRIYIKLNNEYIYSNKYNFNPEDIIILIPHCIQENSCKLK
VTNDIDNCKECGRCNVGELIKLKEKTNVKIFVATGGTLARKIIMDNKPKAVVAVACERDLTSGIQDIKKI
PVLGVFNKRPNGPCVNTNVDMMDIEKAIDFLTGKNILICN
>gi|260687816|ref|YP_003218950.1| methionyl-tRNA formyltransferase [Clostridium difficile R20291]
MKIVFMGTPDIAVPCLQKIIDEKYEILGVVTQPDKPKGRGKKLGMSPVKELAIENNIPVYQPVKARDKEF
IDKIKSLNPDVIVVVAFGQILPKEILEIPKLGCINVHVSLLPKYRGAAPINWVIINGEEKTGVTTMYMDE
GLDTGDMILKTEVNLDENITAGELHDKMMNIGAETLKETLRLIEEGNAPREVQNHEEFSYAPIMNKSLGN
IDFSKSAREIHNLVRGVNPWPSAYTIYNDVIMKVWKTKVLDEKSTKDVGTIIDVSKDGIKVSTIDNVLLI
EEIQMPNKKRMLVGEYIKGNTIETGLVLG
>gi|260687817|ref|YP_003218951.1| peptide deformylase 2 [Clostridium difficile R20291]
MALRQIVQIGEPVLRKKSKKVEKIDEKIIQLLDDMAETMYDADGVGLAAPQVGILKRVVVIDIGEELIEL
INPEIIETSGEQIDEEGCLSVVGEAGNVRRPNYVKVRALNRNGETIELEGEELLARAFCHEIDHLDGILF
VDKIEK
>gi|260687818|ref|YP_003218952.1| putative primosomal protein N' [Clostridium difficile R20291]
MNNILNLSRGFIMKKYAKVIVRSNTIYTDNLFTYQIPVFLSDVIKIGHRILVPFGKGNKPTEAFVFQFTD
SLDEKIKIKEIIDILDENPIFRKEDLELVYWMKNRYLCTYIECINLIYPKGYKLNNYKVVLLGESLSGLN
EIELKEKISTLSDKNREIVEKVIDSKGKIKVDKLKYIPNLNSSLYTMNKNGIIKLCWEYKNHKNEKKVCY
ISLSLESDKIDDYIEQNKINVGSKQKEILSFLKNNENVEINDLLDLLNASKQSINSLSKKKLITLEFKDY
YREPKSIYKSVLKSIKLNNEQQEAVDEIKSNMFVDDKKPYLIHGVTGSGKTEVYMEIIEFALNQGLDSIF
LVPEIALTPQTIDRLKSRFGDLVGVFHSKLSEGEKHDVYKAVKAGKVRVLIGARSALFAPFNSLGLIIID
ECHESSYKSEKNPKFNAIEVARFMALKNNITLILGSATPSIEEYYRAKSGEYKLINIKSRANDKPLPNIE
VVDMKDELDKGNRSIFSLKLQKEIRYAIEENNQVILFLNRRGYANFVSCRKCGYVFQCENCDISLTYHKK
SNTGRCHYCGYEKEIPKECPECKSTYVKPFGVGTQKIEEELKYIFPDIKTLRMDKDTTSKKGALDEILNK
FKDKEADVLIGTQMLSKGLDFENVTLVGILSADMILNFPDFKSFETTFQLITQVSGRAGRADKEGKVVLQ
TYDTEHYAIKHAIEYDYEGFYEDEIKIRKAFGYSPFNNMLSVVVSGEDERLVIKNIKNMHASLIYLLEKR
GINDLGFILGPNPCSISKINQNYRWQILFKDENIEINLLKGIIKYICITKRDLIFDKNINVSIDINPNSV
L
>gi|260687819|ref|YP_003218953.1| coenzyme A biosynthesis bifunctional protein [Clostridium difficile R20291]
MLSNTNKFQKRSKVMLKDKTVVIGISGGIAAYKACDVVSKLKKLNANIHVIMTKSATEFVKPLAFQSLSQ
NYVVEDMFEEPKTWEVEHISLAKKADLFLIVPASANVIGKIANGIADDMLTTTVMATKAQVLIAPAMNTN
MYENPIVQKNIQTLKSFGYKFIEPESGRLACGDIGTGKLANPDIIVEEVLTNLTKEQDLKGQSMIVTAGP
TVESIDPVRYLTNRSSGKMGYSIAREAIARGADVTLISGPTNLSIPQNLKKFVQIESAQDLYEAVVSNLS
ENKIVIQSAAVADYKPKTYSDKKIKKKNDDLSIELSRNYDIAYEIGKIKEDKILIGFAAETNDLIEHAKG
KIKKKNLDFIVANDLTKEGAGFRADTNIVKIIDVEGNITEYPKMKKEEVANVILDKVKALLEK
>gi|260687820|ref|YP_003218954.1| DNA-directed RNA polymerase omega chain [Clostridium difficile R20291]
MLKPSINEVLEKIDNRYYLVGTVSKRARKLIDGEEPYVSNKTKEKPVCVATKEVASGKITYRLLTEEEIE
IEEARHHAEQHQQISEEE
>gi|260687821|ref|YP_003218955.1| guanylate kinase [Clostridium difficile R20291]
MFVKKGLLLVVSGPSGAGKGTICKELLKENDTIKLSVSATTRKPRTGEVDGVNYFFISKEKFEEMIEKGE
FLEYAQIYDNFYGTPKAAIMECLEKGQDVLLEIEMQGAKQIKEVCPEGVFIFVLPPSLEELKNRIVGRGT
ETEAEIEKRFSCAYEEIKMIKDYDYFIFNEDVKTSAKEIEGIISSEKNKVSRYKNIIIEKFKEEL
>gi|260687822|ref|YP_003218956.1| hypothetical protein CDR20291_2476 [Clostridium difficile R20291]
MAISMTGFGRGEYKDDNYYFLVECKTINHKYSDINIRLPRKISFLEDKVRNLVKNYVKRGRVDLYIKFDL
LGKEDVNLNFDEGLASQYIDILKEIKNKFDIIDDISVMNVAKFPDIVKIEEKEEDEDLLWSMLNQAVEDA
LIKLREMRSEEGKKLAEDIAMRCDLLKNHIEEIEKYSSSVVEDYREKLNLRISELLDDPSIIDENRLAQE
VAIYADKSSITEEIVRFKSHIGQLKNTIFKDDSIGRKIDFLIQEMNRETNTIGSKSSDINITNLVVEVKS
ELEKIREQIQNIE
>gi|260687823|ref|YP_003218957.1| diaminopimelate epimerase [Clostridium difficile R20291]
MKFWKLHGIGNDFIAIDGRFDQINPSDYTALAKKVCHRRFSVGADGLLVVKDSKVADVEMVYYNSDGSRA
AMCGNGLRCFCKFVYDNCIVKKESFTVDTLDGIKDIKINLTNREINSIRVNMGKGSFIAKDVPVLTNKER
FVQESIKVLDRELKVTSMLMGVPHTVVIVDELDVDDVCKYGKEIENNKIFPEKTNVNFVKVEDKYNIHVY
TWERGCGYTLGCGTGMTASAIVCNLLNMVESSVNVTSQGGTVKIDVGDFSYMTGPAVKICEGVLEV
>gi|260687824|ref|YP_003218958.1| low-specificity L-threonine aldolase [Clostridium difficile R20291]
MRFIDLRSDTVTMPTDEMREAMAKAPVGDSIFRDDPTVNKLEELAAAKVGKEDAIFLPSGTFGNQLALFT
HCLRGQEIIIGKGYHIVTHEVGAPAVIAGVQLRTIDEDESGALNPELVEKAIRRDDIHEPQTGLICVENA
YSGGTVVSLDNLREIKKIAEKHNLPVHLDGARLFNAALTLGVEAKEIAKCCDSVMFCVSKGLAAPMGSIL
AGSKEFIAKARRKQKVMGGGMRQVGIVAAAGIIAIEKMTLRLNEDHENAKYLACELNKIDGIEVNNVNPD
ISMVFFKMSEDIIKEDVLIKEFFERNIKINKMENGEYRFVTHVDITKEDLDYVLKTLKELIGVC
>gi|260687825|ref|YP_003218959.1| fibronectin-binding protein [Clostridium difficile R20291]
MALDGLVIHSIVDELSSKLTGGKIDKIHQPEDDEVIFNIRNNKENFRLVLSASASNPRVYLTSNYQKENP
LKAPMFCMLLRKYIQGGNIVEISQIGFERIIKISVESLDELKEKTVKNIMIEIMGRHSNIIITHGEENKI
IDSIKRVPFSISRVRQVLPGHDYSLPPEQNKLNPLDDISKDLFIKNLEELEGPIFKSIYSKFLGISPIIA
KEICYRAGVNQNAIIKDISDEQFDSLHKVFCNLFNDINSNKYSPCIIIDKKVDKVVDFSCINLTLFSDLS
YINKDSMSRILEDFYRTKDIKDRINQRSSDLKKSISVKLDRLYNKLKKQEEELSESENADIYKIKGELIT
SYIYMVEKGMESIEIANFYDENCNDVTIELNKNLTPSENAQKYFKKYNKMKHAKVEISHQISLNKEEIDY
LENIVLSIENCENLAELQDIKEELAKVGYIKTQKKNSKKDTIPSTKPHEFVSSDGFKILVGKNNKQNDYL
TLRLADNDDLWMHTKNIPGSHVIIKCAGKEVPDNTVFEGAMLAAFFSKSKLSSQVPVDYTKRKNVKKPSG
SKPGMVIYETNSTIYVTPEEETVAKLKVKSE
>gi|260687826|ref|YP_003218960.1| putative antibiotic resistance ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MALFAMLKLRRVDYSLYVYLLCLFIESLLIFKCVKEGFFMLLVKVENLKKYYADKLILDIDKLEILENDK
IGLVGSNGQGKTTLLKAILGEIEIDEGYTYLTESYSYISQSENNIETCSHSKEKSLLNAPDKFEEYLSGG
EKVKLKIADALSNKKNIIIADEPTSNLDKKSIGLLEDMFKRHEGALLLISHDRRFLDELCTTILELEDGK
LKAYKGNYTDYLMQKDEEVKRADFEYQEYVKEKKRLEKALLYKKALSDGIRKTPKRMGNSEARLHKMGGQ
TNKKKLDSNVKAIKSRIDKLEVKNKPKVSKEMNIKIQDGMEIISKNLLEVKDMTLKLENKLLLDNVSFKI
KRGKKIALLGDNGCGKSTLIKEILADKNDNIKINNKVKVGCFDQNQSLLDEEKSVLYNTKVNSSFDESFI
RINLSLFGFKGDDVYKKVKVLSGGEKVKIALCKIILEDNNFLVFDEPTNYLDIKSMEALEKALINTDKTM
LIVSHDRVFVSHICNYIIEIKDAKIREFDCNYDEYIISRNKKTPSRDKQIKKENLLVLENRLTTVISMLS
IEKDNLKKELYESEYNELLKQITKLKNSF
>gi|260687827|ref|YP_003218961.1| uracil permease [Clostridium difficile R20291]
MKKTIMSLQHLLAMFGATVLVPILTGFNPSVAIFCAGVGTLIFHFCTEGKVPAFLGSSFAFIPVILAAKE
AYGGDLAYAQGGIIVAGLIYIIMSIIVKIVGVNKIKLYFPAQVTGAMIVVIGLNLLPTAFSMASANFVIA
FITLAIAILTNKFGRGFIKQLGILIAVFSGYIICLLLRLVDITTITEASLFAIPNFTVPKFSLGAIVIIS
PVVLAVFMEHIGDMTTNGAVVGKNFIENPGLNRTLLGDGFATIVAGCLGGPANTTYGENTAVLAITKNYD
PSILRRTAIFAILLACVGKFGGFLQSIPGSVMGGISIMLFSMITYVGLKTIRDSSCVESKINILIIAVIL
LIGLGTTYLSNKGISIGIPITSTVKITGLSLAAIVGIVLNRILNNQDFKVEEE
>gi|260687828|ref|YP_003218962.1| PyrR bifunctional protein [includes: pyrimidine operon regulatory protein; uracil phosphoribosyltransferase] [Clostridium difficile R20291]
MVEKAQLMDEKAIARAITRISHEIIERNKGVENLVLVGIKTRGVPIANRISKKIEQIEGTKVDTGDIDIT
LYRDDLEKIHVEPVVKGTYLDFNVNDKTVVLVDDVLYTGRTVRASLDAIIDIGRPKSIQLAVLVDRGHRE
LPIRADYVGKNVPTSRHEIISVSLLEIDGEDSVTIKE
>gi|260687829|ref|YP_003218963.1| putative pseudouridylate synthase [Clostridium difficile R20291]
MDEVKEFLVLEEEEEVRLDIYLAEQLGDMSRSYIQKIIKDGKVKVNNKVEKAKYLVKEEDNIVIEIPEPK
VLEVLPQDIPIDIVYEDDDVLIINKPQDMVVHPAPGNYENTLVNGILYHCKDKLSSINGVIRPGIVHRID
KDTSGLLMIAKNNYAHNFLAEQLKEHTITREYEFICYGVVKEDKITVDKPIGRNPKDRLKMAVVKDGKNA
ITHFEVVERFDKFTHMRARLETGRTHQIRVHALSINHPLLGDFVYGPKETKFKLKGQTLHAKKLGFIHPT
TKEYIEFNSELPEYFKEAIKKIK
>gi|260687830|ref|YP_003218964.1| lipoprotein signal peptidase [Clostridium difficile R20291]
MLYILIIILLIGLDQLSKIWVLNNLVDVSTIPIINNVFHLTYVENRGAAFGLLQNNQWIFIIVALLATVF
GLYYLNTRKVHIFGRLGIILIISGALGNLIDRVRLGFVVDYFDFRVIWEYVFNVADVFVVVGTVFLCIYV
LFFESKSR
>gi|260687831|ref|YP_003218965.1| putative oligosaccharide deacetylase [Clostridium difficile R20291]
MKKAIWGICICLLSIVGVYTYNHNTHNQNSSKETYTLNDNIKDDYEDVIIKKGNEDEKILALTFDDGPDE
DFTPQILDILKKNNVKATFFVVGEKVEYNKELLKRQYDEGHEIGNHTFTHINVAKNSYGSVEKEITDTQN
IIKSVIGVEPKIFRPPYRAMSKSVCDIIVSKGMNIILWSNLDPRDWSNPGVDTIINTILTKVQNGNIILL
HDYNTKRNDKSQTIQALEVVIPKLKERGYKFVTVSELIQHLDKNKQVQK
>gi|260687832|ref|YP_003218966.1| putative general stress protein [Clostridium difficile R20291]
MDTKKYKDKLLKEREKLTNLVVDMKDNTLFGDTTKHTSEKYSSGELSSYDNHIGDMGTDLYMQNMQNSLI
NHEEGRLYQIDSALSKIENGTYGFCDLCHNQIDLERLDILPDTNLCNNCAKKENALLGDAMQNPDVEDSN
FYSEDLTNLTDLNKNGTLRD
>gi|260687833|ref|YP_003218967.1| putative carbon starvation [Clostridium difficile R20291]
MVSFLGSIVVLIVGYFIYGTFVEKVFGINDKNQTPAIACRDGVDYVPMKWKRIFLIQFLNIAGLGPIFGA
IQGALFGPSAFLWIVFGTIFAGGVHDFASGYLSMKNKGTSASELVGLYLGNGAKIAMRIFSVILLVLVGV
VFVTGPAGLLKTLTGVNAQIWVGVIILYYIMATVLPIDKLIGKIYPLFGAALLIMAVGVAGGLIIKGYNI
PNINLQNMNPNGTPLFPYLFITIACGAISGFHATQSPLMARCVEKESEARPVFYGSMVAEGIIALVWAAA
AMSYFHGIPQLNVIFNDGGAATVVNTVSVGLMGPIGGALAILGVVACPITSGDTAFRSARLTIADAMNYN
QDAVKNRFLIALPLFAVGVALTFIDFNIIWRYFSWANQTLAMIMLWTGSAYLVKANKNHYITTLPALFMT
VVTFSYIMQAKEGFRLPVNISNGIGIVVAIILGLLFFKKAKDIKEQNAHKLAS
>gi|260687834|ref|YP_003218968.1| two-component response regulator [Clostridium difficile R20291]
MRAIIVEDEFPARKELRYFIENKSSIEVVNEFTNGIEVLDFIQENKIDVIFLDINIPHLDGMLLAKTLNQ
FKSRPKIVFITAYENYAVDAFSLDVFDYVLKPYSEERIISMLNKLEKSEMSDIELSNSNSNLYKYKKETV
NQEIEEITHKISLWKGDKLVVIDIDDIYYCEANERQTFIYTEKEKFILKEGISEVENLINDKTFFRTHRS
YIVNLTKVKEIIPWFNNTYILKLKNSDYEVTVSRSKVKEFRLLMHI
>gi|260687835|ref|YP_003218969.1| two-component sensor histidine kinase [Clostridium difficile R20291]
MKTSILIALIEKTSLIVVLFLLITKLKIFKQIFQKEEYSFNDLVCIALVFTFLAIFGTYSGINYMGSIVN
TRIISIVSGGILFGPMVGITAGVFSGIHRYFMDIGGITSVPCLLSSILAGVLSGFLYKRIPKQHRVMYGI
LVGMISESFTILLIYLISYPHSLAIQIIVGIYLPLIVGQIGIGFVISIVEGIEKDKKDIEARNKAEIKAL
QRQINPHFLFNSLNTIASFIRFSPDKARELIINLSTYLRYNLEYSDNLIDINKEIEQVKSFVEIEKARFG
ELLTVSYDIEDVNIKIPSLIIQPLVENAIIHGILESGRAGVVKISIKKLPYSLENTVRISIEDNGIGISE
EIINNVYQDNMPENKIGLYNVHLRLKLMYGRGLNIRRTDNGTLIVFYVKE
>gi|260687836|ref|YP_003218970.1| putative response regulator [Clostridium difficile R20291]
MDILIFDNDVCFGIKLKEKINNILIKEGFDNDVIRLYYNANLLLKELTEKNKVKIYFIVVDAKYKISNEL
CDGLWIAQKIRESDYISPIIFLTNHIEMILGIFDYRLEVMDFILKHDMEIAESKIKACIKIAHKRYVKEK
NYRSNFFTIYSDSSLWKISFDEVIYFETSAIPHKIKLVTTSRIFEFYKSLRSLSDLDACFIRVHKSFVVN
KYHIVSLDLKKNNIKMSNGHICRISNTYRNILKNIIKT
>gi|260687837|ref|YP_003218971.1| cdta (adp-ribosyltransferase enzymatic component); cdta (adp-ribosyltransferase enzymatic component) [Clostridium difficile R20291]
MKKFRKHKRISNCISILLILYLTLGGLLPNNIYAQDLQSYSEKVCNTTYKAPIERPEDFLKDKEKAKEWE
RKEAERIEQKLERSEKEALESYKKDSVEISKYSQTRNYFYDYQIEANSREKEYKELRNAISKNKIDKPMY
VYYFESPEKFAFNKVIRTENQNEISLEKFNEFKETIQNKLFKQDGFKDISLYEPGKGDEKPTPLLMHLKL
PRNTGMLPYTNTNNVSTLIEQGYSIKIDKIVRIVIDGKHYIKAEASVVSSLDFKDDVSKGDSWGKANYND
WSNKLTPNELADVNDYMRGGYTAINNYLISNGPVNNPNPELDSKITNIENALKREPIPTNLTVYRRSGPQ
EFGLTLTSPEYDFNKLENIDAFKSKWEGQALSYPNFISTSIGSVNMSAFAKRKIVLRITIPKGSPGAYLS
AIPGYAGEYEVLLNHGSKFKINKIDSYKDGTITKLIVDATLIP
>gi|260687838|ref|YP_003218972.1| adp-ribosyltransferase binding component [Clostridium difficile R20291]
MKIQMRNKKVLSFLTLTAIVSQALVYPVYAQTSTSNHSNKKKEIVNEDILPNNGLMGYYFTDEHFKDLKL
MAPIKDGNLKFEEKKVDKLLDKDKSDVKSIRWTGRIIPSKDGEYTLSTDRDDVLMQVNTESTISNTLKVN
MKKGKEYKVRIELQDKNLGSIDNLSSPNLYWELDGMKKIIPEENLFLRDYSNIEKDDPFIPNNNFFDPKL
MSDWEDEDLDTDNDNIPDSYERNGYTIKDLIAVKWEDSFAEQGYKKYVSNYLESNTAGDPYTDYEKASGS
FDKAIKTEARDPLVAAYPIVGVGMEKLIISTNEHASTDQGKTVSRATTNSKTESNTAGVSVNVGYQNGFT
ANVTTNYSHTTDNSTAVQDSNGESWNTGLSINKGESAYINANVRYYNTGTAPMYKVTPTTNLVLDGDTLS
TIKAQENQIGNNLSPGDTYPKKGLSPLALNTMDQFSSRLIPINYDQLKKLDAGKQIKLETTQVSGNFGTK
NSSGQIVTEGNSWSDYISQIDSISASIILDTENESYERRVTAKNLQDPEDKTPELTIGEAIEKAFGATKK
DGLLYFNDIPIDESCVELIFDDNTANKIKDSLKTLSDKKIYNVKLERGMNILIKTPTYFTNFDDYNNYPS
TWSNVNTTNQDGLQGSANKLNGETKIKIPMSELKPYKRYVFSGYSKDPLTSNSIIVKIKAKEEKTDYLVP
EQGYTKFSYEFETTEKDSSNIEITLIGSGTTYLDNLSITELNSTPEILDEPEVKIPTDQEIMDAHKIYFA
DLNFNPSTGNTYINGMYFAPTQTNKEALDYIQKYRVEATLQYSGFKDIGTKDKEMRNYLGDPNQPKTNYV
NLRSYFTGGENIMTYKKLRIYAITPDDRELLVLSVD
>gi|260687839|ref|YP_003218973.1| tryptophanyl-tRNA synthetase [Clostridium difficile R20291]
MSEKKVIFSGAQPSGKMTLGNYLGAIKNWTELQDNYDCYYSIVDLHAITVPQDPKVLRANAIELLAQYIA
CGLDPEKNTIFIQSHVKEHVELMWVLNTMTYMGELSRMTQFKDKSQKSEANLNAGLFTYPVLMAADILLY
QTDLVPVGDDQKQHLELARDLANRFNNRFSPTFVVPEGYYPKGGARVMSLQEPTKKMSKSDSNENAFILL
ADDSDSIKRKIKRSVTDSLGVVKYNDEQPGIKNLIDIYSNLSKKSVEEIVNMYEGKGYGIFKEDVAEVVS
EALRPIREKYVDLLNNKDYLEKIYSMGAEKAEKQARKTLRKVYKKVGFIERRY
>gi|260687840|ref|YP_003218974.1| 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [Clostridium difficile R20291]
MNVIGIIGAMDEEVSILVDLMDIRETIKKASLEFYKGILKGKNVVLVKCGIGKVNSALCAQILISEFKVD
AIVNTGVAGALNEKLDVNDIVISTDAIQYDVDTTAFGDPKGVIPRMKTSVFKADERLIDAAYKSSVEEVK
THKVLKGRVVTGDKFINSKELKEELVNDFGGYCGEMEGGAIAHVCYLNNTPFVIIRAMSDKADGSADVTY
DVFVHDAANNSKDIVLNMLKSI
>gi|260687841|ref|YP_003218975.1| putative amino acid permease [Clostridium difficile R20291]
MEKKKIGLWSLVFMNVSALYGIRWIAKSTASSFGLGLGAIPMWLLFSFIYFVPGALICAELASTYQKGDG
GLYDWVKEAFGEKYGFLVSWLNWTAKIFWYSSFLTFLAVNVSYTIGNPALADNKMFVLILSLIIFWALSL
IATKGISFTKIFTNTGALGSTIPSAILIIFSFVAVFMLKKHDIASTYTIASMTPKLNMDAFVAISAIMFG
LAGAETAANFITEIDKPEKNFPKAILISAGIVASLYVLGSIAITMIIPPDQITASKGVLDALSAVCTSLG
IGSWLVQLIAFGIAFSVLGAIVLYIASPIKMLFGSVKKGIFPDSLVEVNEHKIPSKAVILQAIIVTIILL
VTTLMPSVDAIYNVLVTMTALTALFPYVLLYASYIKLRKERPDEIRPYTMAKSTSTCLGLAKMVLVVTVV
GILLSAAPVMPTFAENVIYEIEMIGGGLLVILSGLWLWNRYEKKTAK
>gi|260687842|ref|YP_003218976.1| putative peptidase [Clostridium difficile R20291]
MKAQRLNAVLEQMKKDDISQMLVSDPTSIFYLTGVLIHPGERLLALYLNLNGNNKLFINELFPVSEDLGV
EMVWFNDTQNPVEIITEHIDKNATMGVDKNWPARFLLNLIELGGGSKFVNSSYIIDTLRMCKDEEEKELM
RIASKLNDKAMEQLKATVSGELTEKQLVGKLSKIYEDLGTDGFSFDPIIGFGPNGANPHGEPGNALVKPG
DAIILDIGCIKDNYCADMTRTVFYKEIPEKGREIFEIVLEANKRAEAIVKPGVRFCDIDAAARDYITEKG
YGQYFTHRTGHSIGLEVHDKGDVSSINTDTVQPGMIFSIEPGIYLPGEFGVRIEDLVLVTEDGCEILNKH
DKEICVVG
>gi|260687843|ref|YP_003218977.1| hypothetical protein CDR20291_2497 [Clostridium difficile R20291]
MDKIKLIVDSACDLPDDIIEKYNIEVVGLNVSFGEESYISGKEIDNETFYRKMSESKVLPKTSCPSPDKF
LEAYHCQEESVLVINISSGLSGTYNSALLAKDMFEKEGNNKKVEVIDSLSGSIGIGQLVLKAAILIKEGK
EIEEIVSIINKYKDNPPFFGTLETLENAIKGGRINPIAGKIINTLNFKAIIQVADGVVTPIDKARGEGNS
LKKLITLVESKIKDKEEKVLFIGHANCPEKAQKVREVMEKDVKYKDVVICEIGSVMGTYTSKGAILITAI
>gi|260687844|ref|YP_003218978.1| TetR-family trancscriptional regulator [Clostridium difficile R20291]
MKTNNMKQAILSSATNLIAKNGVQNTSLADIAKDVNISKGTLYYHYASKDDIIYDIADTHLEVITSAILN
CVKNVKSKNSQIEMVNLILEKISTIESRGRVHMYLICEAITSNNDLKERIRLKYIEWRTTLKSEIVESLE
KYNSSENEQDAESFSFLLMSIVDGLVVQSLLKTEKIPYENIASFLVNHWI
>gi|260687845|ref|YP_003218979.1| hypothetical protein CDR20291_2499 [Clostridium difficile R20291]
MYTVVNGVHEVFNNILGGIRIMLRERFVVRNHHNPHTSGCCGTGGEGCCGGDNHEHSHQHSHSHGHEHEH
VNGVGHDHNHDDGFSGTHEHSHEHTHTHGHEHSDGHTHEHK
>gi|260687846|ref|YP_003218980.1| hypothetical protein CDR20291_2500 [Clostridium difficile R20291]
MILSTLGINLYLAPAKLLSGGVAGICVILYKLFGINQGISSFLMNIPIFIIARKYFDNKFLLISFVNMLL
FSLALGLTQDIAKYFPIDDTMLQCIYGGALTGIGMGLTFKARATAGGLDIIAAIMKRKYDIPMKNTFLFI
NFFVVCAGAFLFGAKLVMYTLITMYIISFTMDIGKDCFDRKKSILLISNKYDEISKVIMNKMGRGVTFLE
AEGAYTQNKKKMIYCIISANEIGKFKDLIYDMDSEAFISVNNVEEVKGGGFKDKFL
>gi|260687847|ref|YP_003218981.1| transposase-like protein b [Clostridium difficile R20291]
MIVVEKAYKFRMYPNKKQQELINKTFGCCRFVYNKYLAKRIEVYKNDKETFTYKQCSSDLTNLKKELKWL
KEPDKFSLQNALKDLDNAYKKFFKEKAGFPKFKSKKINRFSYKTNFTNGNIMYCGQYIKLPKLGMVKIRD
KQVPQGRILNATISKEPSGRYYVSLCCTDVDIEVFENTNNQIGLDLGIKEFCISSCGDFIENPKYLKKSL
NKLAKLQRELSRKTIDSLNRNKARLKVARLQEHIANQRKDFLQKLSTKLIKENDIICIEDLQVKNMIRNR
KLSRLISDVSWSEFVRQLEYKANWYGRQIVKVGKFFASSQICNKCGYKNEEVKDLNIREWICPSCNETHD
RDINASINILKEGLRLITIQNK
>gi|260687848|ref|YP_003218982.1| isoleucyl-tRNA synthetase [Clostridium difficile R20291]
MAKFKPLVDSSVKQAEAQVFDYWKDINILEKTLEKGKDDPSFVFYEGPPTANGNPGVHHVLSRTLKDSVC
RYKTMSGYQVKRKAGWDTHGLPVEIQVEKELGLTSKQQIEEYGIAEFNQKCRESVFSFEKQWRIMTERMA
YEVDLDNPYITLDNNYIESVWWILNKFNKEGYIYEGHKILPYCPRCGTGLASHEVAQGYKEVKTNTVIAK
FKKKDADEYFLAWTTTPWTLPSNVSLTVNADVDYLKVKKGDEVYYVSKPLADKVLGEDYEVLEEMKGKDL
EGLEYEQLMPFVEVDKKAFFITVGDYVTTEDGTGIVHTAPAFGEDDYNTGKRYDLPVIQPVDETGKFTST
PWEGRFVMEDGLDVEIIKWLASENKLYSKEKVVHNYPHCWRCQTPLVYYAKPSWYIEMTKLKDKLIENNN
GVKWFPSFVGEKRFGNWLENLNDWAISRTRYWGTPLPIWRCECGHTDSVGSRAELAEKAIEDVNPETVEL
HRPYVDDIHLKCEKCGKPMTRVTEVIDCWFDSGAMPFAQHHYPFENKENFDQLFPADYISEGIDQTRGWF
YSLLAVSTFVLGKAPYKSVLVPDLVLDKDGKKMSKSRGNTVNPMELFDQYGADALRWYLLYVSPPWTPTK
FDMDGLKEIQSKFIGTMKNVYNFFTLYANTDDINPTEFFVEYKDRPELDRWILSKFNNLMKDVEENLAIF
ELNKTLRMIQDFINDDLSNWYIRRSRRRFWATELTEDKKAVYNTTYELLHGLCRAIAPFAPYMSEEMYRN
LTGEVSVHLAEYPKCNEELVDTKLEEKMDLAKNLVTLGRASREVERIKVRQPLQKVLVDGKFEDTISDVV
DLIKEELNVKEVIFAKDLDEYMNFSLKPNFKEAGPLLGSKMNLFVGALSKLNAHETANKLEKGETLTVDL
DGEAFEFNKDLVLIGITAKEGFNVSVENNLFVILDTKLTEELINEGYAREFISKVQQLRKSNNFEVLDNI
VIEYCGDDEIAKAVDHFNEYIKSETLALEINRVDDKSLEEQNLNDHMTGIKVIKK
>gi|260687849|ref|YP_003218983.1| cell-division initiation protein [Clostridium difficile R20291]
MLTPIEIENKEFKKGLRGYRDEEVDEFLDIIKEDYESLCRENTALKEKLGLYQDQVNKYENIEETLKATL
ITAQSAAEDTCSAANKKAKIIVEEADLKARQIIEQANNRVIEIRKEYDALVKEFKIFRNKFKSLLEDEIR
SVDEIFYDVDEKCVNAFEGTTVYNYSNDEAATTLE
>gi|260687850|ref|YP_003218984.1| putative RNA-binding cell division protein [Clostridium difficile R20291]
MDKLKLTNHIKDIDLKNKMFKVIDKANSCIKNYDVKSTEFLNPYEVKNAVAILNSTNEIKYSVDGGYEQA
ERSTVFIYPFYMEYEDIEDTLRFLQIEGNFKFKNISHKDYLGSILGLGIKREKIGDIIIHDSFCQVVVSS
DICDFIIVNLEKVSRNNVIVKEISRENIVNSSSKYKEVSFTVSSDRLDCVISGIYNISRQDSAKYINGEK
VHVNYEKITSTSKIVKNDDLISIRGKGRAKVTQIGDITKKGKIKVQARLIV
>gi|260687851|ref|YP_003218985.1| hypothetical protein CDR20291_2505 [Clostridium difficile R20291]
MGTIRIALYYLLDIIAWMIVIKSLMTWFPNGRQSKIFNILENLTEPIEGPIRSIMYKYTNGPIDFSPLIA
IVLLMFLRQLVLVIF
>gi|260687852|ref|YP_003218986.1| hypothetical protein CDR20291_2506 [Clostridium difficile R20291]
MSNGIISKFKNWIVDEEEDYIEDEYESGMDDIVQEEEMNSGFSTAKANKIVNLHTTSQMKVVIVEPKVYD
EAATIADHLKQRRAVIVNLEGLTNSEVRKSIFNFMNGAVYVLDGSIQKVSKSIFILAPNNVDIDANMKKE
LESKAFFPWQNK
>gi|260687853|ref|YP_003218987.1| putative alanine racemase [Clostridium difficile R20291]
MGSIKDNLSEIRNKIDKAAKKVDRDSKEITLLAVTKTVDVDLVNEAMREGITSVGENKPQELARKYDIIG
DKLNWHLIGTLQTNKVKYIIDKVCMIHSLDRIALCEEIQKRAEQINREIDCLVQVNISKEESKHGLDREE
VVDFVKEVSEKYKNIKIKGLMTMAPFIEDEDEIRGVFKGLKDLSKQIKELNIPNVGMDVLSMGMSHDYEI
AIEEGATIVRVGTSIFGERNYNKK
>gi|260687854|ref|YP_003218988.1| hypothetical protein CDR20291_2508 [Clostridium difficile R20291]
MILGILIYLVFNILVMIISKNVDTLVLKNEKVDAKIPVKGTIEKDANDQSNYLSTYISKEDSNNFEKNQN
VIIEYHEQKLDAKVYKIYENNNKIMVKLKISNQIVANQDTSVEEFDIIYNQMECLKIPKTSIKTKDNKRG
VYVIDEQSQSVKFVILEGITYENESSVFVDYYKNDINGVTSVNLYDKIILRPNSINTNIRIK
>gi|260687855|ref|YP_003218989.1| hypothetical protein CDR20291_2509 [Clostridium difficile R20291]
MSEILLGTGLLLLVLCCFTIFSYKAPYGMKAMGALANAACATFLVEAFNLSLLGDVLGMEFFRSVGAANG
SLGGVAAAILVPLALGVSPVYAVLIGLSCLDFSILSGFVAGYFVSFLIKFIEKKVPPGVDLVVVILLCAP
LSRLIASNVDPLVNSTLLQIGQVLIEATNISPIIMGIILGGIITVVGTSPLSSMALTSIIGLTGLPMAIG
ALGAFGSAFMNSTLFAKLKLGSKKDIISVAIEPLTQSDIISANPIPIYSTNFFGGAFSGIIVALMGLVNM
TPGTATPVAGFAIMFAYNPVQQVLITAGLCALFNVIAGFLGSKIFSTFKVLTAGEIRGTDVEEEIA
>gi|260687856|ref|YP_003218990.1| cinserved hypothetical protein [Clostridium difficile R20291]
MIIVNVGNILETIKMIDEEQLDIRTITMGISLLDCIDPDGDKAREKIYNKIMSSAKDLVKVGKDIEREFG
IPIVNKRVSVTPISIIAGATDENDYVKFAQTLDKAAEDLGIDFIGGFSALVQKGYTKGDKILIKSIPKAL
ASTNKVCASVNVGSTRCGINMDAVKEMGEIIKETAELTKDAKGFGCAKLVVFCNAVEDNPFMAGAFHGVG
EADRIINVGVSGPGVVKRALEKVKGEPFDVVSETVKKTAFKITRVGQLVAKEASSRLDVPFGIIDLSLAP
TPAIGDSVANILEEMGLEVVGTHGTTAALALLNDAVKKGGVMACSHVGGLSGAFIPVSEDAGMIDAVIKG
ALSIDKLEAMTAICSVGLDMIAVPGNTTAGTLGAMIADEAAIGMINNKTTAVRIIPAPGCDVGDMVEFGG
LLGRAPVMPISTNSSELFTQRGGRIPAPIHSFKN
>gi|260687857|ref|YP_003218991.1| hypothetical protein CDR20291_2511 [Clostridium difficile R20291]
MKAILTVIGKDKPGIVAGISDELYKQNINIVDISQKILQDYFTMIMIVDLEKSLNSFEKTVEDLVERGKK
LSVDVKIQREEIFNSMHNL
>gi|260687858|ref|YP_003218992.1| hypothetical protein CDR20291_2512 [Clostridium difficile R20291]
MKKYEIFIFMSIIVLCFISFPHKVFGQEENCLEDFERWVQENKNNKEEIVYTLSCNMVIDEEFRFYIPYD
SNFTIDTNKYKILIKNHGRFIIDDNELNIIGEGGKEGVIHIENGGSISIGINNIIATDGTALYVEEGGDL
HIKSSYESVEKIKANGKDAIGIYTENDIRILNKDIEVNGEHAIGVYSKGDVEIEETSIKAYSSNNESGLL
RDNNKLAQSIISESKKVYIIDDYNELIPSIAKDSGYNIVKCCHRGIGVFSDEIKVSKDDKIENIKFPKYM
VLETSSGNQLDIDVEWDFTDYYEKLEKGENFDITGKFKTEMLNKEKIIINDDVVPILNVSVIEKKTIDNL
ELEFQNTKNGYVAVLFYDMPYSASKVFVEYSSDGINWISEEQEDIRDQAILFFEDFKLRCFRVKVVGGLK
EGYSNIVFKPGFIMGGGDNQETPDDERENDDIDGDRGGGGRDDPDRDEDDNNQDGNNGNENNDSNNNQNN
NNENNNSDEKQPNTPKDDVESSTDSNENKNPHDIPKDGNKENNSDKEKGFYNKNPITENDDNYDLSSKSV
FGTNEHSFPYRESISNKNQDTNKNKSNISDYDGIINNNYKLESKEYNLKKDIIFLFCILTPIMIGSILIV
NPDTRKSIIKFIKLKK
>gi|260687859|ref|YP_003218993.1| stage IV sporulation protein A [Clostridium difficile R20291]
MYRRNNMNNNIYEDISKRTQGDIYIGVVGPVRTGKSTFIRKFMEKLVIPNIDNEFKKDRTRDEIPQSGSG
KTIMTVEPKFVPADGVEIKIKDTVSLKVRMVDCVGYIVEGALGHEEGGKQRLVSTPWSQEAMTFEKAAEI
GTKKVIKDHSTIGIVVLTDGSVTGIDRKSYVEPEERVIQELKNLKKPFAVVLNTLSPKSEETSMLRSELE
EKYEVPVLPMNVVEMEEEDIEEVMEAVLYDFPLTEIRINLPKWVEGLERNHWIKSSIITTLKQSIIDIGK
IRDIEGIIQGFSELEFLEDTGVDNVELGEGVINIDLQTKQDLFYNVLEEKSGFKIEGDYQLLSLITRLSK
VKNEYDKIESALIDAKIKGYGVVAPSLEELSLEEPEIMKQGKQYGIKLKANAPSLHIIKADISTEVSPIV
GNQNQGEEMIKYLMEVFEEQPADLWESNMFGKSLHDLVKEQLQSKLYTMPEEIRVKMQKTLQKIVNEGSS
NIITILL
>gi|260687860|ref|YP_003218994.1| hypothetical protein CDR20291_2514 [Clostridium difficile R20291]
MSVEVNKPSIWKNFKVLIILFVAGAFIYALPYLKNYYYDTFAQAFNLTNTQMGSLGSIYGLLAMVSYLFG
GFLADRISARKLLSGSLIITGISGLVLTLYPPYIVVFLIHALWGITTILTFWPALVKAVRMLASENEQGK
AFGFMESGRGITNAIHLSLVLILFGYISSKVSDKSGLTAIIVLYSAINVIVGVLVFFKLKDNEKEVSAKF
DKEAFFAVIKMPHTWIITIIMFCSYSANMSFYYFTPYSTEAFGATVVFASAISILAQYCRPVASAASGLL
GDKVGSSKIISYGFILMIAGLLGVIFTPTKSSMIYILLIGCVAIYVSMYAIQGLHYSLLEEGNYSLSISG
TAIGIVATLGYLPEVLCPLAAGKILDAFPGVTGYRYYFIVLTIVAIIGLVFTFIWMNMTKERRKELIEMN
NKSNENTTKVS
>gi|260687861|ref|YP_003218995.1| amino acid permease family protein [Clostridium difficile R20291]
MSLNKFEIGGITVKKKIGFWDLVFMNISALFGIRWIAKSTASSFGLGLGSIPVWLLFAFIFFVPASLICA
ELAATYPKDGGLGEWVKQAYGEKWGFMVSWLNWTSKIFWYSSFLTFLAINIAYMLGNPDLSNNKMFILAL
SLIIFWLLSLVSTRGMAFGKFFTNTGALGSTIPAILLIVMAFMSVVILKKAPSASIYTIQNIIPKIDANS
LVSISAIIFALSGAETTANFITEMDNAKKNFPKAILTVAVLIGGIYILGSVAITMILPPDKIAASTGILD
ALAKVAQDLGIGSWFIRIVAFGITLSVLGALILYIAGPVKMLFGNVREGVFPKQLTVTNKYNIPSNAVIV
QAIIVSLLLVGTNLLPSVDNIYNVLVTMTALTALFPYVLLFTSYIRLRKTRPNEERPYSIAKSDSVCINI
ARMVLVVTVVGILFSTAPVMETLKDNIIYEIEMIGGGLFVIITGLMLWKNYEKKISNNSGR
>gi|260687862|ref|YP_003218996.1| cobalt dependent x-pro dipeptidase [Clostridium difficile R20291]
MSNNMRLERLRKYMNEKSIEIALIFEPDNQFYISGFKAITYSRPIVTVVTQDKIELIVPGLEELHAKEVA
KVDNVYVYYEIPEMKEHGISHKHYLDIILNKYPKGTTVGIEKDIVSASFSEYITDKSFAIKDVGSKIFEM
RYVKDAKEIEFLKIAGYLSDIGIKGSLENVRVGMSELEFDVAGDNALLKYVSENYPDTYIGFANWTCSGI
DRTAQPHLDSNTRILQRGDIVIHSRQVWYENYRAENERTFIIGKPTERQKEVFKIAVEAQQAGLDTIKAG
IPARMVDEAARAVVAKYGLELYSNHRIGHGLGLSEHEEPYLRFDNELILEEGMVFSMEPGIYIPGVGGFR
HSDTAIVGKNGATIITNYPRSVEELILDI
>gi|260687863|ref|YP_003218997.1| putative transcriptional regulator [Clostridium difficile R20291]
MTNKELQKKRILMYFIEAAQNIMENEGIENITLRKVADMAGYNSSTLYKYFKNLDHLISFASIKYFKDYN
LNISRCIENVNDEYKKYIIMWKLFCKHSFDNAQAFYQVFFNLSSDELSYITKQYYDMFPEDLGIHDSDIS
LMITGESIKERNKILLNNLVDTGYIPAKDLDIINDIIISFYQNLLFLKKNTGKNSGDDELTMKMISSIEY
IIKHAK
>gi|260687864|ref|YP_003218998.1| glycerol-3-phosphate dehydrogenase [NAD(P)+] [Clostridium difficile R20291]
MEKVCVLGTGSWGSALALGLAKKGNDVSMWTRKEEQAKKINRTKENTDYLPGVLFPNNITISTDIEKTIK
DCKVIVLAVPSQAVRSTCQKIKPFIKEGQVIVNVAKGLEKGTGLRLSQVCEEELPQNPYVILSGPSHAEE
VARDIPTTVVVASKDLKIAQMIQDLFMSPKLRVYTNPDIVGVELGGALKNIIAFGAGICDGLGYGDNAKA
ALMTRGISEMSRLGIAMGANMSTFAGLSGIGDLIVTCTSMHSRNRRAGILIGKGMSLEDTLKEVKMVVEG
ITATEVAHDVAEKLDIDMPITNAIYSVINKGSNPKEVGIELMMRSKKHEMEEVVLGDDI
>gi|260687865|ref|YP_003218999.1| hypothetical protein CDR20291_2519 [Clostridium difficile R20291]
MEIFSYIIIAVVAYLLGNISTSYIVAKRIAGVDIRTQGSGNAGSTNVLRTLGKRAGAMTFLGDVLKGVMA
VLISEFAARLVGIDTLLAGYLAVICVVAGHNWPAVLGFRGGKGVATSLGAMLAVNPVITLMCLAVFILVV
AITKYVSLGSVVGIGCSPIFMIMVKNKAGLIVALFLTASVIYNHRANIKRLLNGTERKIGQKKE
>gi|260687866|ref|YP_003219000.1| putative GTP-binding protein [Clostridium difficile R20291]
MSISRPVVAVVGRPNVGKSTIFNKFAGKRISIVENTPGVTRDRIFAEVEWLDKYFTLVDTGGIEPDSEDI
ILSQMRNQAMLAMDMSHVILFIVDGKAGITAADKEIAQLLRKTKKPVILVVNKIDSQSQFDNIYDFYELG
FGTPFAVSGANSMGFGDLLDEIVENFPAGLDTEYEEDIIRVAITGKPNAGKSSILNKILGEERVIVSPIA
GTTRDAIDTYFEKNGQKFLLIDTAGLRRKSKIYETIEKYSVIRAMSAVDRADVVLIVIDALEGVTEQDTK
VAGIAHDEGKGCIFVINKWDLIEKDNKTMSNYTKDIKEKFPFMMYAPIVFVSAKTNQRMNKILDTVEYVS
NEHSKRISTSALNEVIGEAVMLNQPPSDKGRRLKIYYGTQTDIRPPKITLFINDKDLTHFSYQRYLENKI
RENFGFEGTSIKFEYRQKNKK
>gi|260687867|ref|YP_003219001.1| hypothetical protein CDR20291_2521 [Clostridium difficile R20291]
MVKILEVNVKKVNNIISKVYKDSIAEEIGIEVGDLLISVNEQPIHDIIEYRFLLSDEYLDVEIQKKDGEV
YIYEIEKDYDEDLGVEFTNPIIDQAKSCRNKCMFCFIDQLPEGMRETLYFKDDDSRLSFLQGNFVTLTNM
SEEDINNIIKYRISPINISVHTTNPELRQKMISNKFAGKLYGIMKRLADAHIEMNCQIVLCPGINDGKEL
DRTIKELAQLYPYVNSVAIVPVGITKHRENLVELNIFNDKSASKTIEQIHQIQQKYLEKLGTRFAFLSDE
FYILSNSELPGYEEYEGFLQFEDGVGMIRKLKTEIEEYLNILPENILKREKKVSIATGHSAYEFIQSMAD
AMMDKFKNLQVNVYEIKNKFFGETITVSGLLTAKDLKEQLEDKELGEALYITRSMLKADEEIFLDNIELN
QLEELMRIKIIPCLNEGKDFVDKILK
>gi|260687868|ref|YP_003219002.1| hypothetical protein CDR20291_2522 [Clostridium difficile R20291]
MGMDIGLNEYTLAIVTLDKNMKNGGGCPIFYANDEKDLQNKALLMSKCVGGMVHDMTNGTLIIVKH
>gi|260687869|ref|YP_003219003.1| hypothetical protein CDR20291_2523 [Clostridium difficile R20291]
MDRVFFVAVIIGITSRIIMLNLDQKQYPTQPNVLLSQLILAFVASSLGALLVPALINRSYTSITFLSLAA
EQFRQVRANRRNTLQNLEEVQLVKRGAAFIEEIARTYEVRNYMCIVTSFLTIGLYYVILAETKISEGMSL
VISSICGLVLAFILKKLLTRKSIGDIADVMPAEISFVDESILKVGDLKGITNIGLKSDREVYINRGVGIQ
IIPKNKDYANAGILFDSGQRQAIVYNIYSRLGLYGDYGEPSFVPLPRRNKEDESIMIAYLPVDKNMEKVM
EAVKSCPILSSSKGKNLSLKNYKIGKKGSA
>gi|260687870|ref|YP_003219004.1| hypothetical protein CDR20291_2524 [Clostridium difficile R20291]
MEESLLNANLFRHSFIVALVVGILCRGLVLRVTDKQYPSRPQDYLEQIIISGLSASLGAIALPALIDKEF
AALTFFAVAIQQFQGLAEQERITLKNIDNEELVPKGDAYVEEIASTYESRSYISLFSALVSSIVYIVFAR
KYDLSFFHCTILAIVSGAIVGLIFRRFLRRNSIADIADIVPAKISFEGPILMVNDVIITNIGLESTREKY
RNECLAIEVIPRDLGAFGIVNDIGQRQAIIHNLFIHMGIDRDVDEVDIVAISKTNLEKSTVVIPYMPILK
DIDVMIDVVKSTPIIETSKGKQSDFSRKTL
>gi|260687871|ref|YP_003219005.1| two-component sensor histidine kinase [Clostridium difficile R20291]
MEDLNSIYFFIVMLSIAIVILAVRYTITLRKYLKEFIYVSKKVSNNEYHARLNISAKGELGELARNFNHM
IKNMDKTLEEVQYKHLQLRSILKSISHGILAIDVNGNILLINDEAKEMIKSEPNQLVEGHNINVVIKEEE
ILKQILQFIGSKDNETANITTKDDIVYKIKVDPVYLQNTNNVIIGSIVNIEDITKKVKLENMRSDFVANV
SHELKTPLTSISGFVETLKSNENIDVNTRNRFLEIIESESDRLKRLIDDILLLSFVENKDTLLMENVVVY
DVFKEVYEITQHSASEKNIEVLYKCDDKSISILSNKDYIKQVFLNLVDNAIKYTQDNGIVQVVVLKDEEK
IVIKVIDNGVGIPKEDVERIFERFYRVDKARSRDVGGTGLGLAITKHIVKSLNGCIKVKSELGIGSEFIV
TILQKNFLK
>gi|260687872|ref|YP_003219006.1| two-component response regulator [Clostridium difficile R20291]
MNTKVLVIDDEMHIVELLKFNLEVSNYEVSYSYDGFDGFIKAKEIKPDLILLDWMLPNISGIEVLRKIRS
DKDLKNIPVIMLTAKNMENDKVEGLEIGADDYITKPFSIKELLARISSVLRRYNLTSLGEENNILTTGNL
KLDLSKHEVTKGSEKIELTLKEFELLKLLIQNKGKVLSRNYLLDKIWGYEYYGETRTVDVHIRYLRKKIE
DEDKSEKYIETIRGVGYKID
>gi|260687873|ref|YP_003219007.1| hypothetical protein CDR20291_2527 [Clostridium difficile R20291]
MKDYINIKNVQDIKEYVNLSGNCEELDEKLNSVNLVITCKNIDAKNREDMLKVCKECDLTFENITSNSQI
HSDIVNIVNKDTIGKRRDGDALITNLEKVPLLLFTADCVPISIIDAKNKAIGLAHAGWRGTFSNIGHKTI
KLMSECYKTVPEDLVCIIGPSIGPCCYEVSEDLVEKFNTILTNNDEKFYIIKEGSYYLDLWKINEYMLRC
SGVKKENIINLNLCTSCRADKFHSYRKHNKASERIGTVLQIK
>gi|260687874|ref|YP_003219008.1| putative ATP-binding protein [Clostridium difficile R20291]
MQCPYCNYKESKVIDSRHTDLKSIRRRRECESCKKRFTTYEKIETTPLMVIKKDNSREYFDREKIKYGLL
KACEKRPVSIEEIESIVVHIENEINKCFIEEIETKKIGEMVMDKLKELDEVAYVRFASVYRQFKDINTFV
NELKSILIEKGDK
>gi|260687875|ref|YP_003219009.1| hypothetical protein CDR20291_2529 [Clostridium difficile R20291]
MIRVSDIMEKEIINVKNGKRMGFIIDIDMDIHEGKVVSFTIFGDGSRSFFSRGGDEEVIFWNDILKIGCD
TIIVNIGSELSLDEFEI
>gi|260687876|ref|YP_003219010.1| RNA polymerase sigma-G factor [Clostridium difficile R20291]
MQVNKVEICGVNTSELPVLKNKQMKELLLQIKNGDEEARQQFVRGNLRLVLSVIKKFNNRGENIDDLFQI
GCIGLIKAIDNFDLSQNVRFSTYAVPMIIGEIRRYLRDNNPIRVSRSLKDIAYKALQVRERLIRTNSKEP
TVSEIAKELELEVESVVMALDAIQDPISLFDPVYQDNGDAIFVMDQVQDKKDTDENWLQEISLKEAIKKL
NSREKLVLDLRFYKGRTQIEVADEIGISQAQVSRIEKNALKNMRKYV
>gi|260687877|ref|YP_003219011.1| RNA polymerase sigma-E factor [Clostridium difficile R20291]
MLRLKERIISFITMLGIKLKIIKPKGIYYMGGANILPPPLKPEEEMELLQKLETDESVKSILIERNLRLV
VYISRKFENTGIDVEDLISIGTIGLIKAVNTFKLNKNIKLATYASRCIENEILMYLRKNNKKKTEVSFDE
PLNIDLDGNELLLSDVLGTENDEIYKIIEEEIDRDLLVMALDRLSDREKQIMELRFGLIDKGIEKTQKEV
AGMLGISQSYISRLEKKIISRLQKEMKKFV
>gi|260687878|ref|YP_003219012.1| sporulation sigma-E factor processing peptidase [Clostridium difficile R20291]
MFKGFKGGYMVYIEYYVIENLVINYIIISCTSILTKRYNPKKNKLLGASLGSAYSVAYLYPSMNILFTVP
FKIIIMSIITLISFRSKSKKDYVHVALVFYLVNIFISGSTYFIIYFTGISHLKISFLIACTYVSCELLKY
IYKDLKMLKYIKELTKTININLLEKSFCCKALVDSGNLLKDPISQSDVIIVKSSVLEGFIPEKLLNINYE
DIDMKKAQEIIGSLDDKTSGRVRIIPYKHAGSNKTSIIIGLKADYIEVDEQKIGNIILGISNFNDREYGA
IMNPNILPGF
>gi|260687879|ref|YP_003219013.1| putative extracellular solute-binding protein [Clostridium difficile R20291]
MIKLKKVLSLVMVGILSVSILAGCSKKEDSKGKEGKEKLVVWSAPLTDHDADAWKPIFEKFEKENNCEIE
FQIVPWDNYAEKYATAISAGEGPDIGYMYAEMFPQFIEMGAVEDLTPYLEKSGTSDNYLYLDDAKMMGGI
YGLPIEAANPGVLYYNKDILEKLGEKPPKTWDDFKRICEKATKDTDGDGKIDQWGLAQGWGSKVFGSLNW
NWYPYLWQAGGDIYNDDLKSVKFNNAEGLKAANFINDMKKYIPEDALSKDSNEMIESVFGPGKAAFTIML
SSAATSTFDKSFPDLNWGYVTSLEDKTVGSFASVDDLTLMSACKNKELGFKLLEYMLSKESMEAFHKEIP
RAPVAKGEKYQGDPRFEEMVTRDKHMYRPLTVGPHGVEIYEYLWKQLQMMIAGDITPEQALNESAKYANG
LLAQ
>gi|260687880|ref|YP_003219014.1| cell division protein [Clostridium difficile R20291]
MMLNFDVELEECAQIKVIGVGGGGNNAVNRMVEAQLKGVEFISVNTDKQALYTSKAEYKVQIGEKLTRGL
GAGANPEVGKRAAEESKDEIVKLLQGADMVFVTAGMGGGTGTGAAPVVAGLAKEMGILTVGVVTKPFAFE
GKIRMKNAEGGIAELKSKVDTLITIPNDRLLQIVQKNTSMLDAFAVADDVLKQGIQSISDLIAVEGLINL
DFADVTTIMKDKGLAHMGIGSASGETRAIDAARQAIQSPLLETSIQGAKGVLLNVTGGPNLGLFEVNEAS
TLVMESCDPEANVIFGASIKEDLGDEIMITVIATGFEGLQNGALDLDTKPKSSIRSSLNTTVKQAVKEIE
EEVIAEEKIEPPKKASIIEEDDDESMEIPTFLRRRR
>gi|260687881|ref|YP_003219015.1| hypothetical protein CDR20291_2535 [Clostridium difficile R20291]
MLWVLGGLAFGVVVGYYIPFTYSMDYSIYMSVAILAIMDSIFGAIKSNFEDNYDNVIFITGFIGNAILAI
LLTYIGEKLGVSLYYVAVLVFGMRLFNNLSIIRRYIISNIMNKKRKN
>gi|260687882|ref|YP_003219016.1| hypothetical protein CDR20291_2536 [Clostridium difficile R20291]
MKKKIVILGAFILGIFISTYIKSLDPNRVYITLGQTESIESEVENTKKEIKNLKETLKNNKKTLNEYKEA
KKNGNESIQTLMQKELEEVKELSGYSTVTGPGITITMRDSERELKDGQNPNDLIIHDIDILRVLNDLKKA
GARAISINGERVLATSKIKCSGATITVNDTTYGQPFIIKAIGDIDLLSAAINSPESYAKSLKDIYGINIK
VQENNGNKVNLFAK
>gi|260687883|ref|YP_003219017.1| hypothetical protein CDR20291_2537 [Clostridium difficile R20291]
MKKRFINKSIIIGSVVLGVLVSLQLKIINIENRGMTTFKRGEQLTEELKSLKTEKENLQSEVNSVKKDIE
TYRGKNNKGEQDILKSEIEKYETLAGYTDVEGTGIKIEINSTKDLGNSDKNDSILYNYDLLLSMINKLNS
AQASAISINDQRIVFNTYMYLKEDKLCMNDTVIKEPIIIKAIGDSDTLASALNIKYGIVWEIETYYNAKV
KVTKEDNIEINGHSDINKAEGK
>gi|260687884|ref|YP_003219018.1| putative cell division protein [Clostridium difficile R20291]
MIVLVFILMLSFCICIIVKSDLFDVKKIDVIGNKRVTKSNIMKELNINLNENIFAYNFKDMKNKLIKNPY
IENVEIKRKLPNKIIISLKEKEIFAVLKDEDNYCYIDKKGNLLEELRGSNESKKDLIVDVDYSVDDNKSI
KFKNYKTKENVFKTLNYLKEEGIYRKINYVNLKKESNIEMLTRSNIKILLSNDDNLDYNISRVSKILIDL
QNKNTNGGTINLNYGKLAVYSPEG
>gi|260687885|ref|YP_003219019.1| UDP-N-acetylglucosamine--N-acetylmuramyl-(penta peptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [Clostridium difficile R20291]
MKVLLSGGGTGGHVYPAIAIANKIRDEHPDAEIIFVGTEKGIESEIVPKYGFELKTVTVQGFKRKIDFDN
VKRVFKLFKGLEQSRKIVKKFKPDIVIGTGGYVSGPVLFNASMGKIPAIIHEQNSFPGVTNKILSKTVTK
VLTSFEDSHKRFPEAAEDKLVFTGNPVRKEILLSRKNIARKNLSISDEKRMVLCYGGSGGSRKINDAMRL
VIKNMVNEDIAFIFATGKSYYDEFMGSISDINLKPYQKVVPYLEDMANALAASDLVIGSAGAISLAEITA
LGKPSIIIPKAYTAENHQEYNAKSIEKQGAGIAILEKNLTPESLNTAVFKLLGDRELLVDMANASKTIGK
PEAIDLIYDEIMKVYNSTQKSTSKKTKKEKVIKEVKEIKKETTPSIEGQAKVIGIKKR
>gi|260687886|ref|YP_003219020.1| cell division/stage V sporulation protein [Clostridium difficile R20291]
MPKENLKKQIDIRMKTEFDGVVFYTTMLLVFVGIVMVFSASFIQSSFKHNDAYYFLKKNVIYAVLGFIVM
IITSRIDYSFWKKNATAIGAIAVVLLLLVLTPLGIEANGAKRWLGIGALTFQPAEIAKFATIILTAKLIE
KNYDKIKSLTKGVVPLLVVPGIFFALIILQPNLSTAGTVILVTFVMIFVAGMDMKIVFAMIGSGAALFAA
LVIAEPYRLSRVTSFLDPFQDPLGKGYQVIQGLYALGSGGLFGLGLGKSKQKYFYIPEPQNDFIFAIIGE
ELGLIGCIIVIMLFVVLVYRCVRIALKTSNVFACMVVIGIGAQIGIQAALNIAVATSSMPATGVALPFIS
YGGTSLTIFMGAVGIVLNISKHVKIN
>gi|260687887|ref|YP_003219021.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Clostridium difficile R20291]
MDLKGKKVLLVGLAKTGISTIKHLDKLGASIIVNDIKDENKLRNILDELKSINDIKYILGHHPEDVDDID
MVVVSPGVPLDLPFILKLKNSGKYIIGEVELAFKLSNNPIFIGITGTNGKTTTTSLVGEIFSRAKRDTYV
VGNIGNPVIDTIETSSEESVLVTELSSFQLESIDEFRPKVSAILNITEDHLNRHHTMEKYIEAKANIFMN
QTVEDFCVLNYDDEVVKSLADKCNAKVIYFSRTKKVNGGVYLENNDIIIDIDDKIKFLNKDDVSLPGGHN
LENCMAAIAIAYVCKIDLEVTKDVLMTFKGVEHRQEFVRNLDNVIYVNDSKGTNPDSTIKAIQSYDRPII
LIAGGMDKGSNFDELLETAKSYVKSLVLLGETASNIENCAKNKGFNDIHIVKDMEEAVKTSYEISKSGDI
VLLSPACASWDMYESFEVRGKDFKDNVNNLK
>gi|260687888|ref|YP_003219022.1| phospho-N-acetylmuramoyl-pentapeptide-transfera se [Clostridium difficile R20291]
MMLGITELTYTALIAFLIVIIIGPIFIPMLRKFKFGQTVRDDGPQTHLAKNGTPTMGGIIMIVAILITGL
TRVKVSHDMAVGLICIAGFGFIGFLDDFIKIKLKRSLGLKAYQKIILQVALSFYVAFYQYTSSSSASQLM
IPFTDFVINVGILYIPIMMFIIVAIVNAVNLTDGLDGLASGVTLIVSVFFMLFASSIAGNTEVAVLAAAT
VGACLGFLGFNSYPARVFMGDTGSMALGGAVVAFSVLTNSVLIIPIIGGIYFAEALSVLIQVGYFKATRK
RFFKMAPIHHHFEQCGWPETRVVFIFWIITVVLAWISIIAVF
>gi|260687889|ref|YP_003219023.1| UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-ala nine ligase [Clostridium difficile R20291]
MECLTIKELVLATNGKLIYGDYNDCVSDIVIDSREASAQNAFVAIVGENLDGHTFMKPAYDSGCKTFIKN
ESNGIKLESSDINLIEVKDTSLALGDISKYYKEKFDIPFIGVTGSVGKTTTRDMIYSAISAKLNILKNEK
NLNNHFGVPLTLFNLNKEHECAVIEMGMSGFNEIKYLVDIVNPKIAVISNIGLSHVEKLGSQEGILKAKM
EITSNFDETNTLIVNGDDKFLSTLKEKEHVYKLKTFGFNKNNDIYCESYTMEEDSLTFICVINGKKEEIF
IPTIGEHNIYNAMSAILVGLCLNISLDYIKKGLKNFKGTKMRLDIIKNEKLTIINDSYNASPDSMDAALK
ILGRYKGRRVAILGDILEMGEISEYGHRLVGKSSMNNTDIIITIGENSVFIGEEAKQLGFNSANIYHFEN
REDVFNKLNELVKTGDTILVKGSRGMRLEKIVEYLNK
>gi|260687890|ref|YP_003219024.1| stage V sporulation protein D (sporulation specific penicillin-binding protein) [Clostridium difficile R20291]
MRKVKRISKKRLVLVLILACALFFCLVIRTGYLQLMKGNWLSTKALEQQTRDIPIEPKRGTIYDRNMKEL
AVSVTKYTVWCKPVEVEDKKEAAEKVAEILDEDYKDIYALISKKNMALVKVKRWIDDDKASQIRDAKLSG
IWVAEDNQRYYPYGNFAPYVLGHTSSDATGISGVEMQYDKKLKGKPGKLIVSTDASGREIPQGMEKYYEP
VQGNGLVLSIDEVIQHYTEKAVQKAYELNNAKKVTAIAMNPKTGDILALASKPDYDPNDSRTPIYPYYQE
ELEKYNDKDKIKGYYQMWRNPAVSDTYEPGSTFKLITSSSALEEGVIKDGEKFTCTGSVTVGGRKIKCWR
HYRPHGTQEFKQAVQNSCNPVFVELGSRLGVGKMYDYIESFGLMDKTGIDLPGEAKGILYNEKNVGPVEL
ATISFGQSISVTPIQLITAISSIANGGDLMQPRVVKSYTDNKGNITETVKPKKVRSVISKETSKKMLEIA
ESVVTEGGGKIAYIPGYRLGGKTGTAQKVIDGKYAPGKYICSFVGIAPCDDPQIVVLAIVDEPTGVSAFG
STTAGPIVKEIMNDSLKYLGVKPVYKEEEKAEYEKKQVKVPDVRNLKIGDAVKALEDAKLKPDLDADIEL
PEDTKVKDIFPKPGVKVNEDSSITLYFEN
>gi|260687891|ref|YP_003219025.1| hypothetical protein CDR20291_2545 [Clostridium difficile R20291]
MKKNYKIHNLNEYKNKKKNNYKKRNKKKIGAKCILLIAIFSVIILNLCGYSKISEMKYDIYYLQKDLRKK
EIVLEELKAKETEKTSIKEIELKAKELLNMDYPKDGQIKYIDVDN
>gi|260687892|ref|YP_003219026.1| S-adenosyl-methyltransferase [Clostridium difficile R20291]
MEFHHVSVLLNECIENLNIKPDGVYVDCTMGGAGHSKEIVKKLSDKGLFIGFDQDKNAISTAKERLSEYE
SRVKFVHSNFENIKEELEKIGVYKIDGVLADLGVSSHQLDEADRGFSYMQDAPLDMRMDVRCEFSAYDVV
NTYTEDELTKIIKDYGEDNWAKRIAKFIVEERANKPIETTGKLVDIIKKAIPKKARIDGPHPAKRTFQAI
RIEVNNELGVITKMINDASSIMNKGGRICIITFHSLEDRIVKNAFKHLASDCICPQHLPICQCDKESEVK
IITRKPILPSEEEIEVNPRSRSAKLRVAEKI
>gi|260687893|ref|YP_003219027.1| prolipoprotein diacylglyceryl transferase [Clostridium difficile R20291]
MDRVAFTLFGIDIMWYGILMACGMILGTLIAIKEAKRVGIKDDDVLNIAIIAIPVGLICARIYYVVFNWS
YYAQNMSQIFNFRGGGLAIHGGLIGGILAGYIYTKIKNINFLKMADTVILGMPLAQAIGRWGNFINGEAH
GGATNLPWGIMVDGVKVHPTFLYESIWDFGIFIVLLLFRKNKKYEGQVIVTYITLYSIGRFFIEGLRTDS
LMLGPLRMAQVISLIGVIGGIIAHVYLSKKNKHNISEE
>gi|260687894|ref|YP_003219028.1| putative peptidase [Clostridium difficile R20291]
MEEMSMEKIVNDILKEEVYYEKLQNGLDVYFMPKRGFMKKYAILATNYGSNDLEFVPIGEDKKIRVNEGI
AHFLEHKMFEQPDGGDAFDKFSKLGVNANAFTNFTMTAYLFSATENFYESLEHLIDYVQTPYFTDENVEK
EKGIIAQEIKMYNDDPDWNVYFNCLKAMYVNYPARIDIAGTVDSIYKITKEELYKCYNTFYNPGNMALFV
VGDLDVEKVIDVTKKSNNYKVDKLSKSIERFYPEEPESVKEKEVIEKFPISMPMFNIGFKDSNVGLKGKE
LLRKEIVTDILVGMLFKKGSKLYEDLYMQGLINENFGAGFSSQVDYAFSIIAGDSKEPKKVKEIILDYIE
KSKKEGLSKEEFERTKKKKIGSFIKCFDSINFIGNSFISYVFKDINLLDYLDVIKDITFEEVEERLKEHF
KEEYCVISIVEPK
>gi|260687895|ref|YP_003219029.1| putative peptidase [Clostridium difficile R20291]
MVNTKKIINLGNNINLTLIKTEKFKSNLISLYVQRLLDEKETTKNALIPSIIASGSAKYPSARAISNKLD
DLYGSSMGADAVKRGERQVLSFKVINISEKYLDESIFEEVVEFFNEVINNTLVVDGGFKEEYLNIEKENL
REKIQSIINDKKEYAQDKCIEAMCKGERYSVSEFGYEDEIDSITSRELYEHYKNILKTSPIDIVVEGNFD
EDKVVDIISKNLKFEREEIINIPRADFIKNVDEVKVIDEQMEITQGKLVMGYRANVDYADIDKYYALVVG
SNVLGGGPHSKLFVNVREKESLCYYIFSSIEKYKSIMFISSGIETKDYDKAVELIKKQVESVKAGDISDE
ELENSKLALVNSMKSITDNIGGMSDFVFSQSMAKTNSEVQDIISSIEKVTKKDIVEAIKNIELDTVYFLR
N
>gi|260687896|ref|YP_003219030.1| putative GTP-binding protein [Clostridium difficile R20291]
MKLGIVGLPNVGKSTLFNAITQAGAESANYPFCTIDPNVGVVSVPDERLNKLQELYNSEKIVPTAIEFCD
IAGLVRGASKGEGLGNKFLSHIREVDAIVHVVRCFEDENVVHVDGSVDPLRDIETINLELIFSDIEILER
RINKTQKAAKADKTLGSELDLLKSIMSTLEESKCVRTMEFTEDEQTFVNSLDLLTSKPVIYASNVSEDDL
ADNGENNKYVQQVKAFAETEDAEVVVVCAQIEAEISELDSAEEKKEFLETLGLEQSGLDKLIKSSYALLG
LISFLTAGPKEVRAWTIKVGSKAPQAGGKIHSDIERGFIRAETIAFNDLVEHGTMAAAKEKGLVKLEGKE
YIVKDGDVILFRFNV
>gi|260687897|ref|YP_003219031.1| putative signaling protein [Clostridium difficile R20291]
MLSDAKNNRYGLSIIAVISILVITISCLIYGSRLNKTLGEETNQYLSEIANQSVNVLKKQINGDIKLLES
ISIFIEGEESFEVDNILSILKRQAINSSFKRMGVILPNGTAYTTDGYIEDFSKRDYFLKSMQGEVVITEK
LKDVIEDDKNTNSNINVYSVPIYKDNEVKGVIFATHSTKLYEKILSVPTFNGKGYSYIARSNGNIVLNPS
SKNANSTKENLFSYIGRSDSISKSSINNMKSNIKNFKSGSLSYSMFGKGYYLSYAPIGINDWYLFSEVPK
TAISEKSYAIIKLTLSACVVLIIIFTALTIYILFIHKKSKEKLEEFAFKDNVTGIGNSNKFNLEGGKFLS
SHEKKNLVLIYFDIDKFKLVNDRFGYEEGDRVLKEIAEIIKNIFKEQSVFSRISNDNFAIIFEKKNNRES
IIEICELIRKKLSMIKTSLGVELNLIPSIGVYFVEEGETNISTCLDKAMIAKTTVKRKYLKVYEIYAENL
KETLIEERDIEQEMHDALKNEQFKVYLQPKVDLSTTKIVGAEALVRWQHPKKGLISPGVFIPIFEKNGFI
TELDMFVFAQVCKNFKRWENENFPTFPISINLSRVHLENPGFISELERITKEYEIEPNLIEIELTESAIF
DNTKILFKIMQTLKSVGFKISMDDFGSGYSSLNMLKDMPIDVLKLDRQFFITVGNAKKSQIVVSSIVQMA
KQLDIKVVSEGVETVEQAEFLRFIGCDMAQGFLFARPMPIEEYEKLILDRYSLNRKETN
>gi|260687898|ref|YP_003219032.1| putative UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimela te ligase [Clostridium difficile R20291]
MKLNDIIQGLDIINVKGELNIDINNVQYNSRKVTKGTLFICIKGFVSDGHKYIKDAIEKGASAFLVEEDV
EIKGCTFIKVKDTRKDMAKVADNFYNHPSQKFNVIGVTGTNGKTSITTILNEILTLNKNKVGLIGTIKIF
DGEKDIVSNSTTPESIDLQYHFNNMLDNGCDYCAMEVSSHSLALNRVDETDFKLGIFTNLTPDHLDFHKD
LEDYRKAKEKLFFKTTMANIINIDDEGGKKIYENIKGINVPCYTYGVDTKADFMARDIKSDSDGVSYRLI
TPSYEEVIFIPVPGMFTVYNTLAVIAACYVLGIPKPIYKEGLRLSNGVSGRFETVPNDKGISVIVDYAHT
PDALENVLKTTQQFAEGKIISVFGCGGDRDTEKRPLMGAIGQKYSDLCIITSDNPRTEEPEAIIKDILEG
IDKKKENYHVVVDREQAIAEAISMAKKDDVVIITGKGHETYQIIGKVKHHFDDKEVANECLSKM
>gi|260687899|ref|YP_003219033.1| AraC-family transcriptional regulator [Clostridium difficile R20291]
MKYCKKCSIIFYNITEERSSIKTMDNKIGYLNDNFKIFNIRDKKDIQFEYHNHDFNKIIIFINGNVTYFV
DGIPYKLKPWDILFISNNEIHKPVIDSNVFYERIAIWISPEFMKKNSDATSDLEKCFKIATENKCNRLRL
NIHDIESIKSFIEQINISESNTEFGNEILRNALFIQLMIFLNRIFLKNENMESTEDVFYDETIKKVLNYI
NSNIDDKLSIDSISSEFFISKYYLMRKFKSHTGTSIHNYIVQKRLILAKSLITNGYLMSEVCNKCGFNDY
SSFVRAFKKNYGVSPKNYINNKNPLDITLLDE
>gi|260687900|ref|YP_003219034.1| PTS system, glucose-specific IIa component [Clostridium difficile R20291]
MENALVEKIDSLTNGEILDIEEVPDSVFSSKLMGDGFAIKSSDGLIYSPVDGTIGVIFPTKHAIIIKSKK
SGVEILIHLGIETVNLEGNGFEVFVNVGDEVKAGEKLVKMDLEYIEKNCLSTISPVVFTNLEQNQKLSIK
KGITTAKEENRVSILRYDIEKIG
>gi|260687901|ref|YP_003219035.1| putative transcription antiterminator [Clostridium difficile R20291]
MNKGNCILGEILIMIIQQIYNNNVVLVLDENIKKELILTGCGIGFQKKKGQEIDKSKIERTFVIQDESFL
DKISKLASQVDEKFFEISTEIIAYAEENLNTKLYEYIYVALTDHIAFAIKRYHENITIKNDLLHEIKRIH
KKEYEIGKWAVDYINKEFDVKFPVDEAGFIAMHIVNSNYKGSSKESLLITKIVKDILNIIRYYYRVEFKE
DDINYDRLLTHLKFFAKRLVKKEKINDTNNEIIDIIKVKYEKDYDCAYKIKTHVEKNYDYYVSQDELLYL
TLHIKRVISVLNL
>gi|260687902|ref|YP_003219036.1| putative Na(+)/H(+) antiporter [Clostridium difficile R20291]
MSTLVTLLGLLVCTKISTVFSKKWSNIPLAIYQIVLGIILSILPFKLSFSFNPEIFVICIIAPLLFSEGQ
NVSRKELLELRKPILLLAFGLVLITVFAGGIFIHFLIPRMPLSVSLALAAVISSTDLVAVKSITQGLNFP
KNMMSILEGESLLNDDDRIINIME
>gi|260687903|ref|YP_003219037.1| oligopeptide ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MKKEESLLKVEGLKKYFEVKSGLFDKEIKCVKAVDGISFDLKKGETLAIVGESGCGKSTAGRTILRLIEK
TEGKVEFNGVDIYKLEKEELRKLRPKMQMIFQDPYSSLNPRLNVEQIISEAVIEHNLVPKNEIKDNILNV
VESCGLSKYHLNRKPDEFSGGQRQRIGIARALALNPEFIVCDEPVSALDVSIQSQIINLLMDLQDKYKLS
YLFISHDLSVVNHIAHRVCVMYLGSIIEIATKGELYLHSQHPYTRALMSAVPVQDPTIKKNRIILKGDIP
SPTNPPSGCKFHTRCPYCKEICKKEIPVLKEISRNHFVACHLV
>gi|260687904|ref|YP_003219038.1| oligopeptide transporter, ATP-binding protein [Clostridium difficile R20291]
MSKALIEVKDLKVYFHTDKGIVKSVNEVSFNINEGETIGIVGESGCGKSVTAMSLMKLLPTSKIEGGEII
FRGKDILKMNEDELMVIRGNEISMIFQEPMTSLNPAFTVGSQIIEGIMIHQDLSKEEAKKKVIDMIKLVE
IPRAEEIYNSYPHELSGGMRQRIMIAMALSCNPKLLIADEPTTALDVTIQAQILDIMKNIKEKLNTSIMM
ITHDLGVVAEMCDKVLVMYAGKIIEVAEVVELFKNPKHPYTIGLLKSKPVLGKNKDKRLYSIPGQVPNPI
GIPDSCYFSDRCEKVCDKCRTQIPPLIELNSGHSIACWLYKKEEI
>gi|260687905|ref|YP_003219039.1| oligopeptide ABC transporter, substrate-binding protein [Clostridium difficile R20291]
MLNIILWRFYKNMKFKKLASLILVSSLMLTFTACASNDKDKSSGSKSGGTVVIPMASDPDIINGAFANVK
EDSLASNIVYAPLYTYEKGNLVNYLAEKVDFKDSKELTIKLKSNLKWHDGKPITAEDVLFTFNTVLDEKQ
NSPSRQYLLVGEKPVKVEKIDDLTVKITLPTASESFLYGISKISPIPKHVFEGESNIAKSEKNNNPVGSG
AFKFKEWKKGESIVFEKNADYFGGEPKADSIALKIIPNEASQEAALNNGEISLMKTSAEGYEKAKSNSNL
QTYTYSEERLNYIVFNQNISNMANKEVRQALSYALNRNEMIESAYGKEGSVPAKSILVPEADFYTEEGVE
GYDQDTNKAKDLLDKSGVKIDKLKIGYNTGRFGHKNYALVAQQELKKIGIEAEIVPYESKAFFNILFSNS
TECDMYVNGYAWGLEPNPYRGMFETGQYCNQTKYSNAEIDALWEKGFTELNKEKRKEIYKQIQQDISKDA
PIYTIDYEQNLMAAQKNLKGIKDAKPSPAILFEDWSKLYVE
>gi|260687906|ref|YP_003219040.1| oligopeptide ABC transporter, permease protein [Clostridium difficile R20291]
MLKLILNRVKVLIPMLILISILSFGLLELAPGDPADAYINPLMSSQDIENIRVNMGLDKPVYIRYLNWLK
NTLSGNLGISYINHMPVTEQIMEKMGNTFILMGTSLIFSILVAIPLGIFLAVNKNSITSKVSSVFNYIGV
SIPSFWIGMILISIFSVKLNIFPSGGMHTIGNDSIGDLVKHLVLPVITLGLYNTAIFTNYVEASVNEQLK
KQYVITARAKGLSEKVILFKHVLKNSLTSLVTILGMSIQKLVTGAFVTEVVFSWPGMGRLMIDSIFSRDY
TVIMAITMLSALFLILGNLVADILYLLIDPKIKSSKGGF
>gi|260687907|ref|YP_003219041.1| oligopeptide ABC transporter, permease protein [Clostridium difficile R20291]
MFTSILKKLKKDKSFAFACITLSIIIILIIASFILNIDSNAIDTTSKLQEPSLKHIFGTDELGRDYFSRA
LYGGRISLSVGILSMLISVVFGTAVGVISGYIGGKLDQFLMRLVDMLMSIPSFLVLIVLNTYLTPKVSTI
ILIIGFLSWMEVSRIVRGETLKIKENEYCLAAKATGIKTRNILLRHIVLNLKETIVVAGSLNIANAILTE
SALSFLGLGIQLPLASWGNMLQDAQRHIFDKLYLAVFPGLLIFLTVISLTIISKKFSSNT
>gi|260687908|ref|YP_003219042.1| LysR-family transcriptional regulator [Clostridium difficile R20291]
MDIKQLKYFVEIVKSGFNLSIASKTLHISQPALSQIIKNFEESEDVYLFERYKGRLNGLTPAGERFYVNA
EHIINEYKNMMEDLREDSVQFKGKVRIGIPPLILGIAFSDVVAQLVANNPDIEFDIVEKGAYDLNRMLIL
QELDYAVLLHPHKIDKSVVTEHVLQEDELTAFLNINHPLAKKDKIDWNDLNEQLLAIFNPTFMIHHKLMQ
KFTDENVKLKRYIMSGSWDFLLLSTTNSDFITILPSPVHDFFENSKIIEKPFNHPITWKVILCRPKKERY
SHVDQHVFKFIIDFFSKKNS
>gi|260687909|ref|YP_003219043.1| putative acetyl-CoA acetyltransferase [Clostridium difficile R20291]
MKDVVIVSAVRTPIGSFGGVFKNTSAVQLGTIAVKEAISRVGLNLSEIDEVIIGNVLQTGLGQNVARQIA
INSGIPNSVPSYTVNKLCGSGLKSVQLAAQSITSGENDVVIAGGTENMSQAPYIVPTARFGSKMGDITMV
DSMLTDGLIDAFNQYHMGITAENIATKFEFTREMQDKLALESQNKAENAIKNNRFKEEIVPVDVLIRRGK
IETIDKDEYPKLGMTFEGLAKLKPAFKKDGTVTAGNASGINDGAAMLILMSQQKADELGIRPLAKIKSYA
SAGVEPEVMGTGPIPATRKALKKAGLSINDIDLIEANEAFAAQALAVKNELQIDSSKLNVNGGAIALGHP
IGASGARILVTLIYEMQKRKVETGLATLCIGGGQGISMVVSR
>gi|260687910|ref|YP_003219044.1| butyrate--acetoacetate CoA-transferase subunit A [Clostridium difficile R20291]
MNKIVSIDEALSHVKDGDTIMVGGFMANGSPENLIDYLCSKNIKDLTLICNDTGFIDKGVGKMVVNKQFK
KIIASHVGLNKETGRQMNNNETDVELVPQGTLAEQIRAAGYGLGGILTPTGIGTLVEEGKQKIVVDSKEY
LLEKPIYADVALLFASKVDKAGNLVYKGSMNNFNNLMASAAKITIVEADEIVEIGDIDPNEVNTPGIFVN
YIVEGGNL
>gi|260687911|ref|YP_003219045.1| butyrate--acetoacetate CoA-transferase subunit B [Clostridium difficile R20291]
MDKLEMQEYIANRVSKELKDGAVVNLGIGLPTKVANYIPDNVNVILQSENGFLGLGSAEDGNSSDETIVN
AGGQPVTILPGGCFFDSATSFGIIRGGHVDITILGALQVDKYGNIANYMIPGKMVPGMGGAMDLVTGAKK
VIVAMEHTSKGSAKILNNCTLPLTATNAVDLIVTEMGVMEVTSDGILLKEINPAFTLDDVISATEAPLIL
SDSLNGKISVV
>gi|260687912|ref|YP_003219046.1| D-beta-hydroxybutyrate dehydrogenase [Clostridium difficile R20291]
MKMVKDKVVFVTGAASGIGKQIAESFLKNGAKVMFSDINQEALNNTITELQKKGYDCMSVKCDVTKEEEI
NHAIDKTVEKYGRLDILINNAGLQHVSMIEDFPTDKFEFMIKIMLTAPFIATKKAFPIMKKQGFGRIINM
ASINGVIGFAGKAAYNSAKHGLIGLTKVAALEAADSGITVNALCPGYVDTPLVRGQFNDLSKTRNIPLEN
VLEEVLYPLVPQKRLLDVQEIADYAMFLASDNAKGITGQACLLDGGYTAQ
>gi|260687913|ref|YP_003219047.1| putative permease [Clostridium difficile R20291]
MSIIAPIGIIIGIIAIIYFSVKEIHITIAAPIATLIVVLLNKMDVVTSMLGADKNNYMGALGNYIMSYFA
IFLLGSILAKFMEESGATVSIADFILNKVGSNHPYRVLVAIFIVSFILTYGGISLFVVMFAVIPLARTLF
KKLDISWNLIQIPLWLGIATITMTIIPGTPAIQNVIPIQYLNTSLTAATIPSIVGSIGCATFGLVYMKYA
LNKSIRKGETYATYTSKLEEESLDRELPGFFASIFPLLALVIIAITGSTFGSEFMKKNVIYIALIVAILL
SAFLFHKFLSSKIQTLSIGASGSIGPIFATSSAVAFGAVIMAAPGFDVFSKLIMSIPGSPLISLTVLTST
MSAITGSSSGALGIVMPNFADYYLSTGLNPELIHRVATIASNILTIVPQSGVFLTFLSLSKLTHKTGFKE
TFIVVAVGSLIAEIIVITLGLLMY
>gi|260687914|ref|YP_003219048.1| putative Calcium-chelating exported protein [Clostridium difficile R20291]
MMRRNIPTKLKTILALGVLTLATASSAVTASASSLENNVNISNKSLVYSNTKYKFSAKPNCSVKPELKPD
KDNSCKDKNHNDKNCNNTNKPEDNNNSDSTNKPDNNKPESNKPEDNNNSGSTNKPDNNKPESNKPEDNNN
SGSTDKPNNNKPESNKPEDNNNSDSTNKPDDNNNSGSTSENFSAYQKEVVDLVNIERAKAGLNPLTLDSS
ISNVATKKSQDMIDNNYFSHNSPTYGSPFDMLKKFGISYKTAGENIAMGQKTPKEVVNAWMNSEGHRKNI
MNPNFSKIGVGVAQKSGGSIYWTQIFVG
>gi|260687915|ref|YP_003219049.1| pyruvate-flavodoxin oxidoreductase [Clostridium difficile R20291]
MAKFMKTLDGNTAAAHVAYAFTDVAAIYPITPSSTMAEVVDEWASQGRKNIFGQTVNVVEMQSEAGASGT
FHGSLQGGALTSTFTASQGLLLMIPNMYKVAGELLPGVFHVSARALASQALSIFGDHQDVMAARQTGCVL
LASGSVQEVADIAPVAHLAAIEGRLPFIHFFDGFRTSHEIQKVELLENEDYASLLNFEAVQAFRDNALSP
NHPVARGTAQNPDIYFQTREASNKYYQNIVGIVEKYMEKMSNLTGRKHSLFDYYGAEDAKYVLIAMGSVT
ETIEETIDYLNAKGEKYGLVKVHLYRPFSMKHFLDAMPSTVERICVLDRTKEPGSTGEPLYLDVRDVFYG
KENAPMIIGGRYGLGSKDTTPSDIKTVFDNLVSEQPKNGFTVGIVDDVTNTSLTPSEPIKIASKGTIRCK
FWGLGSDGTVGANKQAIKIIGDHTEKYAQAYFDYDSKKSGGITMSHLRFGDTPIRATYLIDEADYIACHK
QSYVYQYDLLKGLKKGGTFVLNTIWDQAGLEEHLPAHMKQYIAKNDIKFYTVNAVKLGQEIGLGNRINMI
MQSAFFKLAEIIPEEDAVKYLKDSIVKAYGKKGEKIVNMNYAAVDAGINALVKVEVPASWENAVDADKGE
VKEPEFIKNILRPMTAQEGNNLPVSTFNGIEDGTFPCGTAAYEKRGIAVDVPEWIIDNCIQCNQCSFICP
HACIRPVLVTEEELANAPEGFEAKKALGKGLEGLKYRIQVSPLDCTGCGNCADICPAKEKALVMKPIDTQ
LDTELDNWAFAVNPDEVAPKVDVMPANTVKGSQFRQPLMEFSGACAGCGETAYIKVVTQLYGDRMMIANA
TGCSSIWGASAPSIPYTCNHEGKGPSWANSLFEDNAEYGFGMYTAVKQIRNKIVDAMTELVSMDICEDAK
AVFTEWLDSRNDGEASKVASAKVVELLEKPACDCTDEKAKELVKAIKDRKDYLVKRSQWILGGDGWAYDI
GYGGLDHVLASGEDVNVLVFDTEVYSNTGGQASKATPAAAMAKFAASGKKSRKKDLGMMAMTYGNVYVAQ
VAMGADKNQFIKAVLEAEKHDGPSLIIAYAPCINHGLKEGMGRTVANEAQAVACGYWHLYRFNPEVKAEG
KNPFTLDSKEPTASFKDFILAQVRYSAIAKQFPEEADGLFAKAEADAKERYEGYKKLAE
>gi|260687916|ref|YP_003219050.1| putative propanediol utilization protein [Clostridium difficile R20291]
MKLPIALSNKHVHLSQADIDVLFGAGHELTKFKPLSQPGQYACEEKVDLVGPKGTLKGVRVLGPARAHTQ
VEISLADGFPLGVKAPIKESGDIAGTPGVKLVGPAGEVEMKEGVIVASRHIHMSNEDAAKFGVTDKQIVK
VKTSGPRALVFENVLVRASDSFNLEMHVDMEEGNAAGVKNGDLVELIVD
>gi|260687917|ref|YP_003219051.1| putative iron-sulfur flavoprotein [Clostridium difficile R20291]
MDSNDKKGLKSTEIIIINGSPRINKNCSFIANKVKAMLEECGLSCKIFNIYNMDIEYCTACGFCEKTGYC
KFNDDMKPLYKMFDDSKGTIVISPVHFDSISAKLKTVVDRTQAIYASKYVLNKPSIDRNKKRIGMYIAVG
GSKSYDSQFKGGQIVMDFFFKSINTKLLHNIYLNNTDDVSYIDNQEFKDIIYKNLKIYIDSI
>gi|260687918|ref|YP_003219052.1| putative regulatory protein [Clostridium difficile R20291]
MTNGSYKMKNLVEISAMVTESTDFFNIKDDIIEKMLEVVHPTKACVNLFYKNDSKYAYLVCSQTLEYVPQ
IFPINSLKGAKIDFDTYPEYIHEAVNEKKIIYVENVFEDSRAEGERDLAKAEGYIGRIVFPFIINNVVVG
FMTCFLKEDDYITEQDIDFISSVASLLSLSIEITNKNNNVQILIDKLRGSISAINEATKKLYLNKSIDGF
LENLSKQACNITNSKEALIIINSHHNKDTIVSCYNVEQKKKTNLYPMIDMFLKKESLGGYLNNLKPCSKK
GINLESYIYYKLQDKNETIGCIVCANSKNYTSDDLNILSILSKQVSVGMQLYEHNEKEVKHKVLENELNI
LNKQQQLIMDKGKMDCNDEKELYFYHKPARVVGGDFYYATKVDDEHIVYIVADVMGHGMVSNYVVAMIKG
AFKVLCNQYNTPREIMTNLNRMLYDEFDKMGVFTTCLIGIIDTKENMITVSNAGHYSPVVVKKDGTIENN
LNCKKGIPIGIMKDATYENNTLSMEDYAMVCMYTDGILEIKNSSKEEYGINRLENFLKENFRLNQQLIVE
NLKLDLKNFSSKDNYDDDILIVMLKDR
>gi|260687919|ref|YP_003219053.1| hypothetical protein CDR20291_2574 [Clostridium difficile R20291]
MKMLNGIIKLFYSEIVKTKINNLDSSGYSLRDECKEIRNITLKIDSVFFKLLKLAFGSILLMIAFNLNMI
LGIGVFLIGVVYILYKRNMEEQVKEHINNVKNNIDISKITFMDEKGRTGLNALITLLLIGLLTGFNWILV
ASFVVVFVFTIKNVC
>gi|260687920|ref|YP_003219054.1| hypothetical protein CDR20291_2575 [Clostridium difficile R20291]
MQIEQLDLETRNKIYCYTKKILRKYQKGITSGKLTADKFADNILSQHFISSILNEKIVNETNFKISYRNY
IETLINIQNENLSNLRKKSTKTAKCFNISQITQLKNLLSNTGYNLLIPYKYLTARDIEGIVTLINTGSIE
LGNERIYNYISKA
>gi|260687921|ref|YP_003219055.1| small acid-soluble spore protein A [Clostridium difficile R20291]
MASNNNNNRTVVPGAKEALNQMKLEIANELGMSNYQQVDKGNLTARENGYVGGYMTKKLVEMAEQQMAGK
SNR
>gi|260687922|ref|YP_003219056.1| putative lipoprotein [Clostridium difficile R20291]
MIAASTACEKGYDVTLIEKNHKLGKKLAITGKGRCNITNACEIEELIENVPTNGKFLYSAFYTFTNDDVI
SMFNNLGVKTKTERGKRVFPESDKAFDIVNALERQLKSKKVNILLNSKVEKIISKNNKIEKVILNDKKEI
KCDSVVVATGGLSYPLTGSTGDGYKFAISQGHTIIDTKPSLIGIEVQESFTKDLEKLSLRNVEIRVFNSK
QKKVYSDFGELEFTRFGLDGPIIKSASCRMKDTRKENYTILLDLKPALDEEKLDKRVQKDFQKYTNKKFE
KALDDLLPKKLIPIIINLSEINANTVVHQISREQRKNLVHLLKNLKFTVKRYRPIEEAIITSGGVKVNEI
NSSTMESKLVEGLFFAGEVIDIDAYTGGFNLQIAFSTGYLAGFNC
>gi|260687923|ref|YP_003219057.1| putative membrane-associated phosphatase [Clostridium difficile R20291]
MDIQLNILLFFQNLRNPILNFIFLVFTISTEAPLLILITTIIYWCINKKCGQKILFAIIGNFVVNLGIKE
FVKAPRPIGIKGLESLRVSTAGGYSFPSAHTQTATTFWVSIMTIFKKRYLHLIGAVMVLGVGLSRLYLAV
HWPIDVIVGWMLGIFFTVIFIKIFDYIDDNKNYILLVVLLIPFIIVAIFLNSPEYFEKFGIIVGFVFGYM
VEDRFVKFNTDNNNKKINFSNKNKGSKNIIFSRICRFLVGIVTIGMLYIGIKLFISMLIVTLNISDSTMS
IIFMNFIKNTVVVFYGIAGAPALFKLLKLN
>gi|260687924|ref|YP_003219058.1| putative phosphoribosyltransferase [Clostridium difficile R20291]
MYKVTGKMLTEEQIKEKVYELGKKIEEDFKGEDLLVVGILKGASVFVSDLIRCIDLDVNIDFMSVTSYGN
STESSGTVKILKDLDVDIEGKNVLIVEDIIDSGLTLSNLVAALKTRNPKSLKLCTLLDKPQRRKANIPVD
YVGFVIEDKFIVGYGIDYAEKYRNLPYIGIVEDVE
>gi|260687925|ref|YP_003219059.1| putative aminotransferase [Clostridium difficile R20291]
MYYNLYVHILISYFYRLYNFIFGGTFMSTNHGANLYSLSSKYGFSKEEFMDFSSNINPFGTSSLAKQYIV
NNIDMVSMYPDPDYIDLKTSISNYCKCSIDNIVLGSGATELISSFIHTINPKQALLLSPAYSEYEKELSK
INCSIEKYFAKEEDNFHINLENLIKTINAKDYDLVVICNPSNPTGFAFTKVEVREILKNTDSFLMIDETY
VEFTDTDTYSCTQLVDDYSNLFVIRGTSKFFSTPGIRLGYGLISNTNVKNEINKNLDLWNINIIASKMGE
IMFSDLDFISNTISLMNTERDYLLKELKNIKSLDIYNTKGNFILCKIKTKELTAKSLREQLLPQKIIIRD
CCSFEGLDEYFFRVCILKPNENKLLISSLKAIFK
>gi|260687926|ref|YP_003219060.1| putative sodium:dicarboxylate symporter [Clostridium difficile R20291]
MLNLKKLWRVNIMKKKIGLVPKLIIGIIVGILIGSYAPEIIVQILVTVSTLFSAFLKFVIPFIIIGFVTA
GIADLATGAGKLLGITTGIAYGSTLIAGLLSFAVSTLIFPNFIDASVASQIGDPEAGMLAPIFTIPLEPM
VDVTAAIVFAFVMGLGISALRNHGKGETLFNFFQEFQGIVTKTLSTVIIPLLPLYIAGTFANITIAGEVW
TILGVFWKVYLVVIPLHFVYMACQFTAAGVFSGKNPVRMLKNQVPGYLTAIGTQSSAATIPVNVGCAEKN
GVSKQIREFVVPLCATIHLSGSMISITGFTTAVLMMNGMPHGIGVLFPYIAMLGIAMVAAPGAPGGAIMS
ALPFLPMVGIPSDGGLASLMIALYLTQDSFGTACNVSGDNAIAVVVDKINDGMSKKGNKEEQSA
>gi|260687927|ref|YP_003219061.1| hypothetical protein CDR20291_2582 [Clostridium difficile R20291]
MEFLKIIINIVLDILKKILVRFKNAKFGLVFVFDLLKLPDFMTDKRINIVDKIKVISVLIFTISYFVSGV
DIIPEMIAGAFGFIDDAIVLIWSIGIVNEEINKYRVIIKKDKHSNIIENVEFSIKDEEE
>gi|260687928|ref|YP_003219062.1| aspartate--ammonia ligase [Clostridium difficile R20291]
MSTIIPKDYKSSLNVIDTQIAIKKLKDFFEMRLSNELNLIRVSSPLFVLPETGANDNLNGEKAVSFDIPF
MNKNAEIVQSLAKWKRLALKKYGFEVGSGLYTDMNAIRKNEELDNIHSLYVDQWDWELVIDKSSRNEKTL
KDVVKRLYGVFKDTEIFVCSMYEGIKEILPEEITFITSQELEDMYPELSPKEREDKIVKEKKAVFITQIG
KTLISGEKHDGRSPDYDDWELNGDILFYNPVLDSALELSSMGIRVDEESLDRQLKLAGCEERKEFDYHKM
LLNGELPYTIGGGIGQSRICMYFLQKAHIGEVQVGVWPQDMIQNCSSAGIELL
>gi|260687929|ref|YP_003219063.1| putative aminotransferase [Clostridium difficile R20291]
MSKYNFDRVIDRVGTDCVKWDFRTNCSTKAQKDGLPFWIADMDFECAEPIIEALRKKVEHKIFGYSSNDS
DKYFNAVCDWYKRRFNWEINRKDIIFSPGVVPAVAILVRILTNSNEGVIVQKPVYYPFEAKIKSNNRDIV
NNPLIYENGTYRMDYDDLEEKAKCSNNKVLILCSPHNPVGRVWREDELKKVVEICKKYDLWIIADEIHSD
LVRKGFKHTPLQSLCPEYKDKIITCIAPSKTFNLAGMQLSNIIVNNDELKKKYQEEVTAVGVATSPNPFA
IVATIAAYNESEDWLNELNDYLDNNIQFIDEYLKENLPKVKLVYPEGTYLAWLDFTAYGLNEVELEDLMF
KKANVLFDEGYIFGKEGIGFERINVACPQSLLKECMDRLKTIFENL
>gi|260687930|ref|YP_003219064.1| putative amidohydrolase [Clostridium difficile R20291]
MGTNKDYIEYVHKVYDYLHTIPEKGFEEYKTSEFVLKELEKMGFENINKGVAGTGIIVTIDSKKEGPVFA
IRADMDALEFIIDGEKKMIHACGHDGHTSMLLTAAKLIKERNLVKRGKLKILFQPGEEKLYGALRVIDSG
LLDDVEEMVGMHLRPGQDCRLGKAIPAMYHCASCIMQFTIKGITCHGSKPHLGVNAVDAVCLAVNAINAI
RVNPAIPNSIKVTNISVKGETYNNIPDEAFMALDIRAESNDIIEELKEKAIHAVKTAVSSINAEAVLISK
DGVPAAEFDEELVNLAEETIKDVLGADASIGIFKNSGGEDFHYYTQKLKCKTTYIGLGADATPGFHNPNV
TFDTKALEYGVDIWCRLVEKRLG
>gi|260687931|ref|YP_003219065.1| putative permease [Clostridium difficile R20291]
MSEVAKKEVKVKKGNVIDAFIGGARNGFQISTNSMAPNVIFGFAIISVFNLTGLLDVIGTIFTPVMSIFG
LPGVAATAIMTIFISMGGASGVIAGLFTAGQISQAHVAILLPMLLLSGAQIQFMGRLLGTAELKTKYYPH
MFVIATLNGCIAMLIMNYFVV
>gi|260687932|ref|YP_003219066.1| hypothetical protein CDR20291_2587 [Clostridium difficile R20291]
MSKLESTTEKVEVKWYGYVALILGALFFSGIFKDAPGPLKVLDFNNVLGSFGTLGTINDGVGTLASNFRG
DGGTGPRDGWLYALTLIPSVMFALGVVRVIDHLDGMKAAQKLLSPLLKPLLGLPGFAGLTLIASLQSTDA
AASMTKELKDDGYIDEKQKAVFCAFQFSGASAITNFFASGAALFPFIGDVPIFIPLALILIMKFVGANLL
RLYLNKFDKGEA
>gi|260687933|ref|YP_003219067.1| putative sigma54-interacting regulatory protein [Clostridium difficile R20291]
MDKKKLILITYDKLNSDHYKEELTNFFGDEIIIETQNILDGIKENLEGEVVLSLSPLTSNFLIKHFKEDI
EIIHGTKALSKLGYEKMMKLPPGTKSLLMTTNKTSAFEMATYLYKIGINHIDFVPTYPDCDEIYDLDTAI
TPGQIRFIPKYIKNIVDLGWRKISLDTYMSLLVVLKLKNEKFIEKLYKLSKETLSHDFLNTSLDNISKLK
TILYMTIDEIGDGLIFFNTFNKVTFVNKSLLNMLELDEKLIKSPSLMEYMPKSFLDKITKNLNIDNMIIY
IDEIDKKFILSKKPFYLYKNIEGCLITLKDVNNIEILEQKIRSDSVKRGYVAKYKFNNIIGNSSIIKDCI
KRAKKMALTDNPILITGETGTGKEAFTQSIHNHSNRKNKPFVAINCASLPSELLESELFGYEDGSFTGAK
KGGKKGLFELAHTGTIFLDEIGDMPHDLQVKLLRVLQEKEIRKIGGTSIIPIDVRILAATNKDLEKLIIE
NKFRMDLFYRISMFTLDLPPLRKRLEDIPLLLESFLKELPYKNIKLDKSLLEALNSYTWMGNIRELRNCV
EYMAYMGSNYLTINDLPQNISSKLNNNHMSSNMSIFNDLNQYDKNICISILKSLHMKPMGRTKLMKFMEY
NVTEYEVRNMLEYLTRNGYLISSKGRKGSSITEKGIKIIENNII
>gi|260687934|ref|YP_003219068.1| putative lipoprotein [Clostridium difficile R20291]
MLRKITAFMLSICLIIGLTGCSLLVGKKDKEKIIDDFKVAVVTQPLSENKVQYNMVEEMTKEYEEENKID
KDKDGQTKVKQTIKHVVLPENFTSNIDSAINKIVKLADDKEVQAIVVSTDQAGLLPALQKVKEKRPEIIT
ISAPMGDDKNQLSQFVDVNLGVSAEERGKVLAERSKEMGAKAFIHYASTDDLKDVNIAKRLEMIKETCKN
IGLPFVQVNTPNINTEEDKNKVKQFLNEDIEKQVKKYGKDINVFGVNEYMDEVILTKALELKYIVAEQSN
PSPIQTYPSVMGLKISEKDAQNYDKINDMISEKAKAFGMSNRLGGYPMPMDAFLPSVAIYLATEMVKQDL
TQEDVCDPDYLEAFTELRFGIGSEFTPLTEVLYNYQSVILSQLIY
>gi|260687935|ref|YP_003219069.1| putative branched-chain amino acid transport system carrier protein [Clostridium difficile R20291]
MRDIFIVGFALFSMFFGAGNLMFPPFLGMESGKDWLIPLIGFVVADAGIAMLVIIATARCKGSMDDVLRR
AGKGLARVMSVAALACLALLVIPRTCATTYEMGIMPIFGDHGPVAKAIFSIIFFGLTLAFTIRSSKVIDI
IGKYLTPALLLVLFVLIVKGIISPAGPMSPEHMIDKNLFGEGISQGYQTMDALGAASMATIMLMSIIAKG
YTSDKDQIGMTIKAGFVACVFLAVVYGGLTYLGATVSTLYDTSIPQASLLVEITSILLYGQVGKVILGVI
VALACLTTSTGLTASISTYFEGISKASYKQLVIGICVASMLISNLGVDSIIAISVPILQTIYPVLLAIVV
MELAGKHIKNDNAFKGAAYVTLVISLLSAINGMTGAVPFIQSLPLAGLGFNWVIPAILGGIVGNFIKSNK
QVA
>gi|260687936|ref|YP_003219070.1| conserved hypothetical pentapeptide repeat protein [Clostridium difficile R20291]
MTKIIKVQKPKFTGELEIIENLEDILEDIFNDEKIFNKIIENEVISDLDSVRVSFESCIFRNVSFENCNL
KKIDLLDVVFENCNLSNSFFDGGSIYRVEFKNSKLIGVRFDDCILKNVLFKDVLGKYSNFSFSKFKIVSI
LDSNFENSVFQEVKGDNLVFEYTNLKKANFNGTKLSGIDFTTNNIEGIEIGIDEIRGAIFDVSQAIDLTK
LMGIIIK
>gi|260687937|ref|YP_003219071.1| putative permease [Clostridium difficile R20291]
MVPNTNNVQPDGNNSSLSFLDKMFKFSERGSSLKTEVIGGVTTFLTMAYIVFVNPAILSEAGMDKAALIT
VTILATAIGTLIFAILGNAPFALAPGMGLNAFFTYSLVIGAGIPWQTGLGVVFLSGCVFFTLAVTGLRKT
IADAIPRELAVASSAGIGLFLAFVGLKNMGVIIANPDTIVSLADFTPTVLIALFALILMAILEYKKVKGG
ILISIVVATIISVIFGFVELPTAIISTPPSIAPVAFKLDIVGALKFSLIGPIFSFMFIDMFDSLAFLITC
CKQMGLEDENGEIKDLGRMLYADVSSTLIGSFLGTSTVTTFGESASGIAAGARTGLASIVTAALFLATLI
FTPLLGIVPTYAAAPALVMVGVFMFESIKQIDFADSKIAVPAFVTVLLMPLTYSISIGLCFGFISYIIMH
VVAKETDKISITLWIIGLLAVVNLVLS
>gi|260687938|ref|YP_003219072.1| putative amidohydrolase [Clostridium difficile R20291]
MSQLLIKNAYLITMNADREVYETGSILIENNIIKNVGKFDINIVDKDAEIYDAKGKILMPGLVNTHVHLS
QQLGRGLADDVVLLTWLRERIWPYESSFNYEDSLISSTACCVELIKSGVTTFLESGGQYVDAMVEAVDKT
GLRACLAKSVMDTGDGLPEAWQKTTDEEINTQLDLFHKFNNTSNERIKIWFALRTIFNTTEELLIRTKEL
ADKYNTGIHMHIAEIADEISFVKQNNGVGTVEYLDKLGVLGPNLLAAHTVWLTHKEIDLFRLHDVKVSHN
PGAAMKVVLGFASIPEMLEKGIPVSIGTDGAPSNNRMDLMRDMYLTSLIHKGRTLNPTVVPAEEVLEMAT
INGAKCALLEKEIGSLEVGKKADMIILNPDTIHCLPMHNPIGNIVYSMTSENVDSTICDGKWLMKERKVL
VVDESELLNKVKKQASKIKDKAEVKIPSKFKIIK
>gi|260687939|ref|YP_003219073.1| hypothetical protein CDR20291_2594 [Clostridium difficile R20291]
MENVFKRLQEFNGYDGYKESFEMNYLCIYESIPLREQVELANNLVDEILNMYKSESNEIYLLEDSNSKSL
ICYFEIFMKKINTLVKEMIIDEKWLYKLTKELIYKSKKVEYVKLGLVLSEKYLNVENLREVVDTFSKSGE
YVFYLSNTIKKLEFYNTYLFNLSKKATGSIKVFAIVNMENLDSKINSYLIEDGYKDTKYERLLMNYIISI
VDLNEYLEKRDLDKEKINNLARLICNYLLSVEFKYIGNKLELVNRFLPTVVNYGTNFESLYSIFLIAINV
LKDENIEYNKIEFEKEINDILLSEKWKNIYFEALRDASGKTEDIIKMSEIYDVNLSFDDLLPYLNRDIRD
FEVYWHISKKGTTSSRLKLLNFFEETFKIDDLIGKMKDIEKDKLTQEYYDDMLFFIVLKGSKSLYPEGKN
ISLKGIFGNINEVRKESINILKRYREKLSLEELKIVKEAYEKEKNVILKDELRRVLYESNNLKKEFVNIE
KIKVDEHGKDIYLTSIAVAGSRFRNREYLEKELEKSKIYYLTREKDNLYDEKAIKIVGETGYVIGYVPRK
ENYILSNLLDGGKLLYCRVTEYNLYEDCIYANVYLSYKDVIETVENSLKMVLDKSRIKLIN
>gi|260687940|ref|YP_003219074.1| putative transport protein [Clostridium difficile R20291]
MNNKKYYPTAIALYFSYFLLGIGISILGQYKPEFSSMWGAKTLSDGTLDVSIVLAVIAALGLGRLISYPF
AGPISDKYGRKVSGLIGNFLHAIFFVGIVFSPNFYIAYVFAIIGGAANSFLDTCVTPSCMEIFASLGTIA
NMFTKFTIALAQFLLPFIIGFVAANSISFKVIFIVTAILIVVDAILIAVLPFPPANNVIDNKGKTVKSEK
MKFTPTSIALVCIGFTCTSTFVLWLNCNQELGKLYGMADPTKIQSFYSMGVICAVLITSLLIKKYIKPIR
ILVIYPIIALLMLLIVYFVQTPTICMLGGFVIGYSAAGGVLQLTTSTANEMFPTNKGKITSIVMIASSIA
NYVILNIAGIITKSGGVNGPKYVVLFNVAITFVGILLALFVNMRYEKEKVYDYDV
>gi|260687941|ref|YP_003219075.1| NAD-dependent shikimate 5-dehydrogenase [Clostridium difficile R20291]
MEISGRTGLFALIGTPVGHSKSPVMYNYSFKKLDLDYRYLAFDITVDKVKEALLAIKTFNIKGANVTMPC
KSAVTEYMDELSPAARIIGACNTIVNDNGKLVGHITDGVGYVRNLKENGIEVKGKKITIMGAGGAATAIQ
VQCALDGAREISIFNAKDDFYKRAEQTVENIKKDVPECVVNLYDLEDTNKLYEEIESSDILTNATLIGMK
PYDNETNIKDTSVLRKDLVVTDVVYNPKKTKMIEDAEANGCKAIGGLGMLLYQGAEAFNLYTGLEMPVEE
VNELCFK
>gi|260687942|ref|YP_003219076.1| putative NADH-dependent flavin oxidoreductase [Clostridium difficile R20291]
MKISSMFTPIRIGSMTVPNRFVVPPMGNNFANTDGTLSETSKAYYLERALGGFGLITIESSVVDKKAKGG
PRKPCLYDDSTIDSFKNVIDACHDAGSKVSIQLQHAGSEGNEKVAGHPLKAASAIPASNGRNTPLAITTE
EIYELIESYGDAALRAQKAGADAVEVHCAHGYLVSSFISQRTNKRVDEFGGCFENRMRLPRLIIENIRKK
VGNSLAILCRINSTDDVPGGIDIHDSSVIAAYLEGCGIDGLHVSRSIHIHDEYMWAPTTLHAGFSAELVT
EIKKAVSIPVITVGRYTEPQFAELMVRQGRCDLVAFGRQSLADPEMPNKAKNGKLDEMIPCIACLQGCVP
NMFQGKPIACLANPILGHEAELKPAEISKEVLVVGGGVGGMLAAWVCAKRGHNVTLVEKSEVLGGQMRLA
AYPPGKGDITNLVRSYISKCNQYGVKICTNTEATVELIKEKSPDVVIIATGATPLVLPIPGINDSGLIHA
VDLLDGKKSCGKKVLVVGGGMVGCEVAAFLGEQEHEVTVIELREEVGADVISEHRKFLMNDFENYNIHTI
TGAKVSKFYDDGVDYLLTDGTEHDLKGFDSVVLAMGSRNYDPLSEVIKEVVKETYIVGDAVKARRALDAT
KEAFEVALNI
>gi|260687943|ref|YP_003219077.1| hypothetical protein CDR20291_2598 [Clostridium difficile R20291]
MNNQKNLNIPITISSYTLGTEVSFRDRVRIAKEAGFDGIGLRAENYIDAKNAGVTDEEMIAILNEYDMKV
TEVEYITQWGTEEDRTEAQREKEQNVYHMAHLFNVKHINCGLLEMIPEEQIITALGELCDRAGELIIGLE
FMPYSGVPDLATAWRVVKGCNRENAMLILDTWHWARAKQTAEDLAPVPADKIVSIQVCDVLETPYEKLRD
ESLHDRLAPGEGYGNTEEFVKIIKEHNISPRVIGAEVISDSLISKGLSTAAETVFNATKKVLDKAWSEVS
PK
>gi|260687944|ref|YP_003219078.1| LysR-family transcriptional regulator [Clostridium difficile R20291]
MNLYHLRYFVTLAHLEHYTKAAENLSITQPSLSHAISLLENELGVALFEKEGRNIVLTKYGKIFLKDVEK
SLEILDSSVKSLKITGTGEGQIDLAFLRTLGTDFIPDIVHKFLKSNPAKSIDFKFHTGVTTDIIQGLKER
KYDIAFCSKLEKEKGIEFIPVAKQDLVLIVPYSHPLAAKDTIDLKETIPYPQIVFNQRSGLRYIIDDMFK
KINQQPNIVYEVEEDQVIAGLVAKNFGIAVVPNMNMLSFTKVKVIQIIHPSWERNFYLAFIKDRYLPPAI
KNFKNFVIKNAQL
>gi|260687945|ref|YP_003219079.1| hypothetical protein CDR20291_2600 [Clostridium difficile R20291]
MLSSYVKRVSKIIKKKYIMFIDESGRADINHEDPFTLTGVIFEYKYAVSQGDYVCSLRKEMDAFKEYCFG
TSNIGIHLTDISRKSRAFEKFDDSQIKLFYDELPLFLSRLECTIISVTVDKARLKKYYAPSKEPYVVAFI
HVLQNFYSFVNNETVESARIVIESRDDVSNLKVQKAFFDVFNNGTIYLDIDEELRDKVKGFIIAKKEDAD
YREGLEIADILCNPLSRARRGLIEANPKCMQYGEKNKIFKSVRNKIYTPTSVNDIRNWGFKEVPIVEPVG
PWLEKMR
>gi|260687946|ref|YP_003219080.1| cell surface protein [Clostridium difficile R20291]
MFLKEGEVIVKKSLKKYLVLALTLVLVFACGVPESSAASKHVIIVNSRKNTLGYFVNNKLVKEFRVATGK
KGSETPTGKTKVVNKIKNRPYYKGNIPGGSPRNPLGDRWMGLALKGTYGDTYGIHGNNNESSIGKHISGG
CIRMHNKDVRWLFDQVPVGSDVIIDYSNDSYVKIAAKYKINLNQTGWKTENGKKYYVKSDGTYQKNSWLK
VNGKMYYFDASGVMQTGWKAINNKKYYLGTDGARVSGWKVIDGKTYYFNSDGVMQTGWQEKNGKKYYLGS
DGLSVTGWQEIDGNKYYFDKTGIMQTGWQQIDGKSYYLDKDGKMLTGSQKIDGKDYTFNEDGTINPTWDT
IIGANRFDTAKKISSVGNWNADSSDTVILVNGNAIADGITATPLASSYDSTILLTNTANLPTETVEEMKL
LAPKTVILIGGENAISSKLEQEIKTTFNTETKRIAGQDRYQTATRIAEELGNREEIKTAYMVSGNGEADA
LSVASKAGEEKQPIILVNKDGITEESYKWLTERKLENAYFIGGPSAINDSVIAKMNDITTEDISGNRIYG
DSRVDTNAKVIEKFYGDTDLQAVLVSKSDALVDALSAGPLAVKLHSPIVLMDNSGLSLEQQRVFANKKVE
TPYQIGGGVSYIVMDKLMDILAK
>gi|260687947|ref|YP_003219081.1| UDP-glucose 4-epimerase [Clostridium difficile R20291]
MAVLVAGGAGYIGSHTAIELLESGYEVVIVDNLSNSNSIVVDRIKELSKKPVKFYNIDIRNKDEMHVVFK
ENNIESIIHFAALKAVGESVEKPIEYYSNNLISTLNLFELMREYGVKKFVFSSSATVYGDPHTCPILEDF
PLSVTNPYGRTKLMIEQMLVDISKADKSLDIALLRYFNPVGAHKSGRIGEEPNGVPSNLMPYITKIAVGK
LKELSVYGNDYPTHDGTGVRDYIHVLDLAAGHVKALQKLEENPGLVVYNLGTGKGYSVLDLVKAFSKASG
KEIPYKIVGRRAGDVAMCYADSSKAEKELGWKAKYELEEMCEDSWRWQSMNPNGYEE
>gi|260687948|ref|YP_003219082.1| UTP--glucose-1-phosphate uridylyltransferase [Clostridium difficile R20291]
MKKKYKYGILIWYNRKFTKKGEKMQMTVKKAIIPAAGLGTRFLPATKSQPKEMLPIVDKPTLQYIIEEAI
ESGIEEILIITGRNKKSIEDHFDKSVELELELEQKGKTEMLEMVRDISNMVNIHYIRQKEPKGLGHAIYC
AKSFIGDEPFAVLLGDDIVDSDVPCLKQLIDTYNEYKTTVLGVQKIAKEDTNKYGILDVKHIEDRVYKVK
DMVEKPAIEEAPSDIAILGRYIITPAIFSILEKQTPGKGGEIQLTDALQTLGKQEAIYAYNFEGRRYDVG
DKIGFLEATIDFALKRENLKDDLMDYMRKKVSEK
>gi|260687949|ref|YP_003219083.1| hypothetical protein CDR20291_2604 [Clostridium difficile R20291]
MSSKYNVWTFNYEFLGLDSGDEKNNEVYYEIDLDEILNENYIDEDIDSGLDSDGNSILGELISEMDIDED
VSVDMTYQELEVDLEDLDSYLDEDIDSDIKGILDEI
>gi|260687950|ref|YP_003219084.1| hypothetical protein CDR20291_2605 [Clostridium difficile R20291]
MLKLGEKIIYELSDGFELSGISRYSKEYKKLHITNLGNIIISKSDEVNEDTGVKYIYSFSDNKEKLEAVL
EDSQIIVYGNNLPFYIKSENSSKNVTANLTMKITLDEYDLICKSQREFIFYLKDNMTILSLDDNKFYMGG
INKDNEKFIFISGKNRFEINFDDIERYILEDKRVSLKGYFHMEREGIIVRSVSIFNNNIDSVVPSDLNER
VKDNQKIGNLPKDCDIVFCKISGNIDGFDYKNTNMLLVKYQDQLIFINKKSKKTIVKSAKDNCSKLNLGE
DIILYDNKNVFNLHINDKNREIMQIDDLKDIENEIVGYTLKHAPFFIQEDFDSLTILKSFQKEIISIKNS
DIKDIVINKELENENSNFVETEIKFNNQKVLLNLSKNMVQKLMQDVFIYAKQPLLKENSIEVIYKNWSKA
MNDMIIFNFFGNIYYMKSEFDKILEKELNDEIRIEVINSLYKQIQEQRNNLDLLSAYMPRILENQEIDLF
EKYNTKLDVQVFKQIKNLLSDLSYNISSYLNEVEKSLDNIIFVISGEDKKKYNYRMLKESESASLDVFLK
QAISRLNHLVENMYPYYVDETSREMFKLFELLWKNYRNIDDDSIKEILFERITNTYVFKQLTLNNSTKER
RKDIIEKIYNSVDYGTNKLDENMFFTGGIKYVK
>gi|260687951|ref|YP_003219085.1| putative surface protein [Clostridium difficile R20291]
MKVLSENNIIRNTVLNVTASFLKQESKINEKLDGVLEKKFEKVEFNEAKYAELLKFNILFYKTLARNTEP
LIGKWIVDKYIPEIDELEKDLELTTAKCRKYVNKAMKEGLDSLKANDLNSFLAYDKMELSERRRRLEKDY
KVLNLYKDLLNISLRKISLEKKECGDLFLKNQADAKRELKREIIFCVNKILASNKDVVPNNVEENNEQDK
VEIKATEIEDLQLGKDNSENDMLLNEIKNSKVKHESKSNDIESKFIDKLNSLNNESISQTIHNEYKKLCG
LEELHSVEGYGFGKEIIKDFACATVVLEFLKRRNRDLIEGAMRLTIIGEFGPENFKEFVDYVIKNKTEIS
EDTWNKAQNLIKDNYSELENHEIASKRTRRNKDIDIEEYIYMIKNADKDICFRSSISIEDDAEEGAKEEV
DSNNQDIGDVVEDKDTTDKEYDSNKEDIIEPENKKSKKKAKLFGFIKKDNEEVEQEEENLNDISPDIILD
KPVENHQAKSEEIEQNELKEIKQEEPSQHIEEERSVKIEKPINNNLDEKVSSNNESKLEKESKNLEDKKA
KEIKEEKLENEKSVVIPIKKKENSNKKSKNSSKDKYRENKKEMKNYVSDKEDSLDDEEVVSKKSRLKETI
IAVVIVVIVGVGYFITVGNNKKNDKENIPKSSTQQQANNKLTEEEKKAQAEKEKKEAEEKAKAEKEAQEK
AQAEKKAKEMEAYKDGKGVYYTVYAGSLKVEKTAKETAKEYEAKGISSTIIQENGYYKIKIGDYSQYGEA
QEKCNELAKKSIDTYIAMYDKYYDYKLEELKESAPSLSAEELKQKYEDLRSELKNKSGYREYVKHLDKLY
EEIVEGA
>gi|260687952|ref|YP_003219086.1| putative sortase B [Clostridium difficile R20291]
MKKLYRIVINIILVLVILYSGFNIYSKLTKYNHDTKTSSELQKKEYKKEDLSKINSDFKFWLSVENTNIN
YPVVQSKDNSYYLDKDFYKKDSISGTLFMDYRNKSIDDKNIIIYGHNMKNKTMFNNLNKFKDADFFKNNN
KIKITLNGKEFLYDVFSAYIVESDYDYLKTNFNNESDYQNYINDITSKSLYKSPIKVNSNDKIVTLSTCT
YEFDDARMVIHGRLI
>gi|260687953|ref|YP_003219087.1| putative polysaccharide deacetylase [Clostridium difficile R20291]
MFRKVLHYLTLLSISIFFIVGCSNSQNNQNENQNKETQLQEDKEKIDGGKDTSNVIVSDGTDKPSKATTN
NDNNKLDVSSLDNTTLDWFYIPNNKHKTPEVNTDIEFKFSDYDALYNGPTKDGQKTLYLTFDEGYENGYT
TKILDTLKQNQVKAVFFVTAPYIKENKDLVKRMVSEGHIVGNHSKTHPSMPTKTSNLKNFNDELYDVEKL
YKDVTGKDMVKFFRPPMGKYSEKSLAMTKNLGYKTVFWSFAYRDWDTDKQPSHEEATQKIMDNLHDGSIL
LLHAVSKTSTEILNDFISNARKLGYEFELLEY
>gi|260687954|ref|YP_003219088.1| hypothetical protein CDR20291_2609 [Clostridium difficile R20291]
MVLTGAHYIYILFMVIILITMIMKKDTIVPCILGVFFMGLFFEKNIFGAITAVFNSFIISLNELGPIILI
IAIMVALSKALEANNAIQYMVRPFSRVIKNSNTAFFVTGFVMLVLSWFFWPTPAVALVGAVFLPVAMRAG
LPAIGVAVALNLFGHGLALSTDFVIQGAPSITAGAAGVAVSYVINDGMILFWVMGIVTISMAFYTLKRDI
NKGMFREELKGFESEEVEEFNGKSKIATILVALGFLADIIVMYIFDLKGGDASALLGGTAVFLIIIINVI
NFGKDSLENVCENIIDGFVFGIKIFGAIIPIAAFFYMGEVAPLTGVFGKVLAPGSQGLLSDIGIALSQTI
PLNKFAVSGIETVVGAITGLDGSGFSGISLVGSLASVFGTAINASVGALAALGQISGIWVGGGCLVPWGL
ISAAAICGVSPIELAKRNFVPVITGLVVTTIVAMFII
>gi|260687955|ref|YP_003219089.1| two-component sensor histidine kinase [Clostridium difficile R20291]
MINKIKPSKLGVILLIYVVISAAVAFILNIPFYSAVESIVKDVSEGKVYFKREVNQLMDNFQTYVNNNGI
RADDGDDIAKWNSDNWFVSMKIYKGNKVFYDTLYYPNEVPDKSEENEFYSSPMARNYEIQFSDIKANIVV
VALFRFRFQNFIEAISITFMALTFIITFLLLFSRKIKYLRKIEMGIKIVESGSLKYRIPVKGNDELSSLA
SSINEMSHTLENQLIKEREMKNKNKDIVTSISHDVRTPLTSVICYLDLIKDHKYNSPEQLEQYIKNVRSK
AYQIKDLTDDLFTHFVNSGEEVSKGYEKINANEFIFQLLLDSSYTLEEKGFHITIENELYNQYHIYVDVT
QFRRIFDNLCSNIIKYARKDKPIVFLIKVEDSKLLIIQKNRVSNFSKNVESFGIGIKNCEKIVAYHNGSI
NVNSDDKEFAIEISIPAKES
>gi|260687956|ref|YP_003219090.1| two-component response regulator [Clostridium difficile R20291]
MNKEIPKKILVADDNPEIREIVEILLTGEGYEVIMATNGEEAVNLVDSTIDLIILDVVMPVKTGFVACNE
IREKTTAPILFLTAKTQDSDKVIGFSAGGDDYLSKPFSYSELISRVKSLLRRYYIYQGKEKEREPNILKT
KELCVNLDTQDVTLNGEPVFLTTIEYSILILMLKNRKKVFSSENLYETIWDEQYFYTANNTIMVHIRNLR
KKLEKDQKNPQYIKTAWGKGYYID
>gi|260687957|ref|YP_003219091.1| hypothetical protein CDR20291_2612 [Clostridium difficile R20291]
MISKTEKKNKCLGSVAFLVLLMGITGYFVFRGQSVESLIKSLKGASPMFILIGFAMMFIYVACEGINIYL
GMKALNQKTTLLKCMGYAFIGFYFSSITPSASGGQPAQVYYMKKDDINISYSSLILLVIVVIHQVVILAY
SGIMFIMEREFILNNVSGMNILLIYGVITNVALVIGVIAIIFSKKLVNNFIISITNLLGKLRIIKDVESS
RKVIISQIEEYVKGAQYIKQNPKLVVQILVITIVQITAMFLVPFFVYKAFHLSTYTVFEILAIQSLLNIA
VSSLPLPGAVGASENSFMTLFKIFFPGHLLVPAMLLSRGISFYAFVAISGLICIVVHVKSSEKVKAVKKV
AYVR
>gi|260687958|ref|YP_003219092.1| putative polysaccharide deacetylase [Clostridium difficile R20291]
MYVVGLIIVVALIFLVHSIIPTYYNKLLNKEVLKNMAGENEIALTFDDGPDKRYTEKLLDVLKENDIQAM
FFVVAKNAEKEPEIIKRMLRENHIVGLHSLEHRNAWLYSYSYVKKDFIESTNIMKNLGVDVNYYRPPWGH
TNIFSNSFVKKYNLKMTLWDVMAEDWEKDSTVDIIINKLMSRTKENSIICLHDAGENSGGAVGAPERTIE
ALKIAIPKLKASGLKFVTPERM
>gi|260687959|ref|YP_003219093.1| putative UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [Clostridium difficile R20291]
MKVLILTGKFGMGHYSASNSLSEDIKAKFDNSEITIKDIFEYIMPNYSDKMYKTFSILVNRGSSLYNLFY
KCAENGKKDIKFTFSDYFLNKLDTLLHEVQPTVVISTFPFCSQLVSRYKEKYNSNLPLITCITDISSHSE
WISKNTDCYLVASKSTKEELVFKGIDESKIKVNGIPVKKEFKRIEHVNHSTKKNILIMGGGLGLLPKSEQ
FYKELNSLEGVKTTVITGNNKKMYYKLYGRYENIEVVGYTNEVYKYMKDSDLIISKPGGITLFETIYSEL
PILAFNPFLQQEIDNASFILNNEIGRILGKNKKYYVDEIKDLIYDDATLKEMSSNMKELKKQFDNNTLEN
ILFSLDEQGACRECM
>gi|260687960|ref|YP_003219094.1| putative serine hydroxymethyltransferase [Clostridium difficile R20291]
MFENLKKADPEIYESMKRELKRQQRNIELIASENIVSVPVMETMGSHLTNKYAEGYSGKRYYGGCEYIDE
VETLAIDRIKKIFGAEHANVQPHSGANANIGVYFAMLKPGDVVMGMNLSQGGHLTHGAPVNISGQYYKFY
EYGIDKDSGLIDFDEVRKIAHEVKPKMIVAGASAYPREIDFKKFREIADEVGALLMVDMAHIAGLVAAGI
HQNPCEVADFVTTTTHKTLRGPRGGVILCKEKYAKDIDKAIFPGIQGGPLEHIIASKAVCFKEALSDEFK
EYQVQVAKNAKALAEELIKRDFKLISGGTDNHLILLDLINKNITGKAAEKRLDDAYITANKNTIPFDPNG
ALVTSGIRLGTPAVTTRGMKEEDMAIIAEAIDLCLTYDEESKARTLVVGLTEKYPLYEEYNIMD
>gi|260687961|ref|YP_003219095.1| hypothetical protein CDR20291_2616 [Clostridium difficile R20291]
MNQNEELEYKKNILKLALFVGELMIKNGAETSRVEDSVLRICRSRGFYHVNIFTTPTVIIISDEKFDGFS
FMKTIQSRGINLNKISLLNSFSREFVSDKEYDIDNAIARLYEIQDVKPYPLWLFYSCTGIASACFACLLG
GNYVLNFILTFIIAIFAAITYDKTMKISAISAFSCLVSSFLIALSGVLLVEIGILDDPKMLIVGAIMPLL
PGVAFIKAIRDLISGNLISGISRAFDAAMIIIAIASGVGFVLDTWYRIGGPF
>gi|260687962|ref|YP_003219096.1| hypothetical protein CDR20291_2617 [Clostridium difficile R20291]
MTDMSMILHFLFSGVATAGFAVFFNAPLYLLLPAGVTGGIGWIVYVYLFNFTTNAVFAGFIAAALVSACS
ETLARKLKQPAIVFVIPGILPLIPGIGLYNTMLSLIQKNYSLAMSKGTDALFLSAAIALGVLVVTSFVRT
LNLLKIRKNFIPYRKSK
>gi|260687963|ref|YP_003219097.1| putative regulator of the sigma(E) factor [Clostridium difficile R20291]
MNQQGFIMEIVDDRTAKLKMQRHSACAACGKCATTNSAESKEILVEVDNTIGAKVGDHVEVSMDNMNVLK
AAVMAYIIPLIALLVGTIGTYYILGAIGMTTGVEAISGLVGICLTIICYLYLKKNDKKFRDSREFIPVIT
RILIDL
>gi|260687964|ref|YP_003219098.1| hypothetical protein CDR20291_2619 [Clostridium difficile R20291]
MEERKLAPNNEREALIKRLKRIEGQVKGIQKMVEQERYCVDILVQISAIRSAINRVGTIILENHIKGCVA
ESIKHDDADKTEEMIKELMDTINKFTK
>gi|260687965|ref|YP_003219099.1| hypothetical protein CDR20291_2620 [Clostridium difficile R20291]
MKKCLYCNRDIKSPNNKLAIKYDDNMNIYPCRAECKEKIEEYIAKKPTYKFINILEVLLGVGGIFCFLSK
WTIAAQVVLGIDALVIFLFPLAGFKMNGKLSMEQTKNQSRSIAISILAFIVIITVLYFKQVGK
>gi|260687966|ref|YP_003219100.1| putative sigma-54-interacting regulatory protein [Clostridium difficile R20291]
MKQMELAIVSLKKDAGEIYENQIRQFLGDNLKINLYSFEEGNLKFFKEKLILLSAYLKYDEIVKLSHYDA
QIIVPKLTFEKNSIDMISKLEKDKIIYVYNLSKDMAIETISLIHRLGIDNINILPCYPEIEFTPTDAVIL
TPGEKILPKFKNCEVVDLKYRIIDLSCIVEIATKTKLKHLIKDDLIKKYVEKIIPTSYSTGELLLDANKF
ERQFDLLLSIIDDGIICTNNDGIIQFYNHIARKILSINANEMIDSFVGDCIKDINFQNILTNKTPFFEKL
IKINHIDINLEIKHIQLNVFDGFILKMTKFSQLEKKQAKLRAQLVNSGNISKYTFDDILGSSIQTINTKK
IANKMAQSNSSILIIGESGTGKELFAQSIHSASRRKDGPFVAVNCSTFQENLLQSELFGYDEGAFTGAKK
GGKIGLFELANNGTIFLDEIGEMDLNSQSKLLRVIQEKQVRRIGSNNVIDIDVRIIAATNRNLKELVSKN
MFRRDLYFRLNVLPLKIHPLRERAADIFEIFGSLKYDIPCNFILSEEVKEIFKMYRWEGNVRELRNLGEY
FCYLGKDIIEICDLPEYILDTIDSNYSRTVCNKVSDNIKKYQFNIGKDKNIMKYDYNFKRSLDEYIFILD
NLKKAYDLKERIGRKSLCKIALEENRFLTEQQIRNMLLELQDFGLVDILVGRGGSIITSKGVEFLKNINR
SNKLNS
>gi|260687967|ref|YP_003219101.1| putative aminotransferase [Clostridium difficile R20291]
MNKYFLLSILARCLLNIINIKLKLLEVFTMNYNFNEIVDRSNNFSSKWSEMEKKYGTNDLLPMWVADMDF
KAAPCIIDSLKNRLEQEIYGYTTRPDSYNESIVNWLDRRHNWKIKSEWLIYSPGVIPAISLLINELTKAN
DKIMIQEPVYSPFNSVVKNNNRELIISPLQKLENGNYIMDYEDIENKIKDVKLFILCNPHNPVGRVWTKD
ELKKLGDICLKHNVKIISDEIHSDIILKKHKHIPMASISKEFEKNTITCMAPTKTFNIAGLQSSYVILPD
EKDYKLLDDAFTRIDIKRNNCFSLVATEASYNNGESWLESFLEYLESNIDFAIKYINENMPKLKVRKPEG
TYLLWVDFSALGLSDEELESVLVQKGKVALNQGNSFGIGGSGYQRINLACPRSMLEEALIRIKNAIK
>gi|260687968|ref|YP_003219102.1| putative malate-2H(+)/Na(+)-lactate antiporter [Clostridium difficile R20291]
MKMNTERKIPSFRYSLLVMLAIIALTSVGIVVFNASITTMFLLSWLIVVPAATKLGYTNDEIEAFGFEVG
KDAFQSNLIILSVGVLIAAWIAAGTIPTVVYSGLTIITPKYFLLTTLIVCSLTSVATGTSWGTLGTSGIA
MMSIGTSMGIPLGLTAGAVISGAFFGDKMSPLSDSTNLAAAVCKTDVITHMKHMFYTTGPAYVICIVLYT
VIGFKYSNNTIDYVQINQIKDVLNSNFHIGLVAMIPIIFLLLLLLLQKPPIISILSSAIMGLIIAVFQEG
EKIGDILNYMLSGFTIDTGFVYADKLLNRGGIMSMAETVLLVFVVFVIAGILQKTGFLEVLLQPLITKIG
KSRTKLVGSTFIVSYFANAFSSSMMFTSVFVGTLMSPIYKEFKLKPQNLSRIIEDTATLGGPLIPWNSNA
VFCAQTLGVSPLEFIPYCFLSWITPIISFIYGVTGFTMLTYTDDEIEELEIFDTAQRRVD
>gi|260687969|ref|YP_003219103.1| cell surface protein [Clostridium difficile R20291]
MMLLKLLCYTILNRKHLDTIILGGVKMKLTKSISSMLCLALVLSLSPVAYANEISRTTVENTLVGQDRYQ
TAVEVSKKGWSSANEAVVVNSESIVDALAVTPFAKLKNAPILLTEKNNLNSQTEKELKRLGVKKVYIIGL
SSSVSNDVQKQLESNNLTTDRVGGSDRYQTALSIAKKIEGLKDISEIAVVNGYTGLADAVSIASVAATNG
MVILPVSDASGISSFKDFIESKNINKSYIIGSTNAVSDKIKQSLPNSERIGGADRNETNGKVIEKFYTSN
KLNNVFVAKDGMKNQNQLIDALAVGVLASKENSPVLIVGEQLSATQKSVFLNKNATSITQVGSGGNENAF
KELKDLQANSNNKRVMYVTNTDKVNIRNDATIEASVIGYLNNGDEVEVLDVLKTGWVKIKYNEGIGYVSG
SYLTNNKPDNSNENIKIKYVKEKDGLNVRKGPSTEDEKIGHLSYGSKVETIEIFATGWVKIKYNGGYGYV
SNDYLSDTPVI
>gi|260687970|ref|YP_003219104.1| LysR-family transcriptional regulator [Clostridium difficile R20291]
MDLLHLKYFQTVARMEHITKASHKLNIAQPALSKTISSLEKELGVQLFDRKGRYIVLNEYGRLFLKRVDS
ILDLVESSKKELQDTSLENSGEVKILSPAAANVLPSLLSNFRKLYPNITFNVSHTLPSSYKKSDFDLYIS
SSFTKLNSENSITLTCEEILLGVSINHPLSLKDEVYLSEVSDENFIVITKGENYREVIDILCESANFKPK
IAFESDSPYTIYALIKSLQGVGFICGKSWGLSQDPEIKLLHIKDIEFKRYLNLSWFSENYESKAVLLFKN
FLINYFKNI
>gi|260687971|ref|YP_003219105.1| putative carbon-nitrogen hydrolase [Clostridium difficile R20291]
MGRKVKIGIIQQHSVLGDVKKNIEKAVEMIDDLGKHGADIICLPELFATGYNLESLGGVKTLELIREHNK
YIEESMSEAAKRNNVYLISPYGTLEKGSTHVYNSAVIFDRKGKIMGEYCKNHLWSLEAVYFKGGEKVEVY
DADFGRFGVMICYDAGFPEVSRELTLKGSEIIFIPSAWRIQDEDMWDLNVSQRALENTVYTVGVNLVSND
SNLILFGKSKICNPRGTVITQLDTYREKYVLSEIDLDEIKKYREDIPYLKDRKSSYNI
>gi|260687972|ref|YP_003219106.1| putative cytosine permease [Clostridium difficile R20291]
MQEREELVLNPVPKEERVGWLAPLFNMLGSNIAISELMVGGTLILGMTLSNMIITSIIGNLILVAIIMIQ
GYIGYKEGLNTYVLAKGAFGEIGGKYLISLLLGITSFGWFGVQAGVAGLSVQKIFPSVNLTLVTVILGLF
MVVFALYGFKAMAKFNYLVIPPLMILMVWGVFKAFSTYGVEAIYNYTPQTTMSMVEGLNIVVGLVIVGAI
ISPDQLRYTRRVKDIWIISFLGLGIISLFQQVAAGVMSMGAPTWDITEVLANLGFGWVAFVILILASWST
NVSNAYSGGLALKTIFPNVKRNVLTLVAGLIGTIIAATGIIFKFQSFLSFLGIAVPAIAGIMWCEYYFIQ
GRTYKHREGINWIAVISWLIGFAASYYSSKINFLIPPINGIVVSMVIYYILMKCFGIKDK
>gi|260687973|ref|YP_003219107.1| putative aspartyl-tRNA synthetase [Clostridium difficile R20291]
METLKGLKRTHYCGELREKNINEEVVLMGWVQKKRNLGGLVFVDLRDTSGLCQIVFDTDVDKEAFEKAEK
LGAEFVIAVKGKVCERQSKNPNMPTGDIEIFATELRLLNKSETPPIYIKDDDDVSEALRLKYRYLDLRKP
SMQRNLKLRHKVMNITRNYLSNNRFCEIETPFLIAPTPEGARDYLVPSRVNPGKFYALPQSPQLYKQLLM
VSGMDRYFQIVKCFRDEDLRADRQPEFTQIDCEMSFVEQEDVMSMIEGLLEAIFKEVLDVELALPLPKMT
YAEAMSKYGSDKPDTRFGYELTDISDVVCNCGFKVFADATQPGKSVRGINVKGKADDFTRKQISSLEEHA
KTYRAKGLAWMKVGQEGVTSPIAKFFNEEEMNAILTKMNAEVGDLLLFVADKNSIVFDALGQVRLEVANR
LNLLDKNVYNLLWVTEFPVFEEDEETGTFSAMHHPFTSPMDEDLDKLEEGDKSSLRAKAYDIVLNGYEIG
GGSVRISNSDIQSRMFKALGFTEERANEKFGYLLEAFKYGTPPHAGLAFGLDRLVMLLAGTDNIREVIAF
PKNQNAVCPMTNAPTLAEDEQLEELSIKVDIKDNE
>gi|260687974|ref|YP_003219108.1| putative histidyl-tRNA synthetase [Clostridium difficile R20291]
MLTKAPRGTKDITPKEAYKWRYVENKFREICALYGYEEMVTPIFEHTELFKRSVGDTTDIVQKEMYSFKD
KGDREITLKPEGTAGVVRAFIENKLYADTQPTKLFYVTPCFRYERPQAGRQRQFHQFGIEALGSDTPSMD
AEIIALAVQFFNEVGLNDLVVSINSVGCPVCRKEYNALLKEYLDSKADILCDTCNERREKNPMRVIDCKN
PTCKENIKDIPFIADHLCDDCKSHFDKLQEYLKEMNINFVIDKTIVRGLDYYRKTAFEIISNDIGAQSTV
CGGGRYDGLVEQLGGPKGISGIGFGLGIERLLLTLEGNGIEIENPQSTDIFIVTIGEEANTRSFKLLKDL
RQNHISADKDHIERSVKAQFKYSDKINSKFTIVIGDDELKNDTATLKNMKTSEQTTVKLSTLVEELKQKL
>gi|260687975|ref|YP_003219109.1| putative coproporphyrinogen III oxidase [Clostridium difficile R20291]
MLYVFLKGHDYKYEVAELIKLFTSEFKFKDSNANNNIESKHLINRLIYENGVLFSSTEYYENGNLKYESI
QNIENMNLEFLDGFDSSKTIEEFLNRLDSESKRNFKKLCKENIKKSMFVVLKQVFNSYVPWGILTGIRPV
KIVHNLMDKKLDDNSIRTILKDNYFIIDKKIDLALEIAKRERLFMYPIDKNKISLYVSIPFCPTRCVYCS
FPSNSLKQFGHLKREYVYKLIEEIKGFAKVIKETKKEVETLYIGGGTPTTLDEEELDLLINSLFNELDLS
KIKEFTVEAGRPDTITEQKLRVLKKHNVSRISINPQTMNDDTLVKIGREHRVSDLVDCFNMARRMGFDNI
NMDIILGLIDEELNMVKNTLEEIKKLSPESLTVHTLAIKRASNLNINMDRYKEHLTQYEEMVKMIDLSMK
YAKDMGLNPYYMYRQKHMLGNLENIGYAKEGYECIYNIQIMEEKQSNYALGAGAISKFVYVDEDRIERVE
NVKNVEQYIERVDEMIKRKKEEVYKNVD
>gi|260687976|ref|YP_003219110.1| putative hydrolase [Clostridium difficile R20291]
MIIKKFVDSYFGVNTYVLGDEKTKKCAVIDPGGSLVETLSFVKENELNIEYIILTHGHGDHIGYVKDIKE
KTGAKVVAHVDEKELLNDKNKNLSYTMRCGAQEFDADIYVSDKDKLELGELKMTFLHTPGHTQGCMCIRV
EDEMFTGDTLFAGSIGRTDLYSGDFNQMEKSLKKLCKYEDAVRVYPGHGPTSTLGVEKKTNPYM
>gi|260687977|ref|YP_003219111.1| putative D-tyrosyl-tRNA protein [Clostridium difficile R20291]
MRAVVQRVSSSKVTVDENTIGQINKGLLVLLGVTHDDKSSDVDYMIDKILNLRIFEDENDKMNLSLMDIG
GELLVVSQFTLYGDCRKGRRPGFSNASRPELANNLYEEFVKKAKDKGVTVGTGQFAAHMMVELTNDGPVT
ILLDSSKSF
>gi|260687978|ref|YP_003219112.1| putative GTP pyrophosphokinase [Clostridium difficile R20291]
MHDKELQEIIEKIKVYAPNANFEMVEKAYNLAKKAHEGQYRKSGEPYFIHPLAVANILIEMELDIETITA
GLLHDVVEDTEYTYEDIKKEFGKEVADLVDGVTKLGQIKYRSKEETQSENLRKMFLAMAKDIRVILIKLA
DRLHNMRTLKYMPPEKAKYKAKETLEIYGGIAHRLGISKIKWELEDRALRFMDPEGYYDLVSRVSMKRSQ
REDYIQGIVELLKDKFKDLSIPCDVYGRPKHFYSIYRKMQKKHKTFEEIFDLTAVRILVDNVKDCYAVLG
IVHTLWRPIPGRFKDYIAMPKPNMYQSLHTTVVGPDGEPLEIQIRTHEMHNIAENGIAAHWKYKEGISSK
ESKVEEKLQWLRQMMEWEKDLKDPQEFMDALKEDVFNSQVYVFTPKGDVIELPAESTPIDFAYRVHTNVG
NKCVGAKIDGRIVPIDYKLQNGNIVEVLTSSNSNGPSRDWLNIVKTPNAKSRIRQFFKKERREENVDRGN
TILEREFKKHDIPQKDPLVEKYMALVAKKFNQPSVEDLIATVGYGGIMSSQVVSKVKDLYLKEVKKAKKE
QQIQEEDLNKHNISETEYSKKRKKNASQGIIVKGLDNILVRFAKCCNPLPGDEIVGYITKGRGVAIHRAD
CPNANNNGDFFQNRLVEVSWSSAGKGKFEAEIQIKAIDRRGIVNEITHIVAMDKLSLNGINARKGKDSIV
SINLLVEVNDTEELKILMKKLKAIPGVESIYRMTN
>gi|260687979|ref|YP_003219113.1| adenine phosphoribosyltransferase [Clostridium difficile R20291]
MDLKNFIRNIDDFPKPGIDFKDVTTLFKDGDAFKYAVDSIVEELKDKDVDLVIGPEARGFLMGTPVAYAL
GVGFVPIRKPGKLPGEVESYEYGLEYGTDTLEIHKDAIKKGQKVAIVDDLLATGGTMEAAAKLVEKLGGE
VVSMQFLIELKFLNGREKLSNYDVNSLIKY
>gi|260687980|ref|YP_003219114.1| putative single-stranded-DNA-specific exonuclease [Clostridium difficile R20291]
MKKWILKYKGKIEESEFSKKLNISPEICQILKNRGICTEKDSEIFMNPSLDYLRDPFLMKDMQKAVDRIK
LAVEKNEKIWIYGDYDVDGVSSTSILCLYFKSIGYNVDYYIPNRLEEGYGINEDAIKLISSRGCDLIISV
DCGITSVSEVNTANDLGIDVIITDHHECQSEIPSAFAVINPKQEDCNYPFDSLCGCGVAFKMIQALTPKE
EFKTSMYNYLEIVTLATICDIVPLIDENRIIVKNGLKSMKEGKNIGLRELIKVCGVESDKIGSSHIGFAI
GPRINASGRLGYSYLGVELFTTQSQEEAVEIASILEEKNNERQMIEAKMYHEAEEMLKSNSRYNDDKVLV
LAKEGWQHGIIGIVASKLTEKYYKPTILLGIENGEATGSARSIKGFNIFEALIKCKDLMTKFGGHEQAAG
LSLDSDNVEILANEINKFADYNLTEDDMIENVNVEFELQENVINLNLVEELHKLEPFGLNNPNPRFIVRN
YILKDLKVIGKNQQHLKLSIEKEKSYECIGFNMSHLKSMYKVGDKVDVLFQLDENNYMGNRKVQFLLKDI
RLARPKSASNDKLSLKLMSKIIPKDTQSLYNISVSDFELFDGNTDINIFDYFEKDTLIISNSINGFYRAM
SDISLIDLDFNINYNIIEDVSKNTDKLELIFSPNIDKIDLKRYNNIILYDYLYNKGEYSYIYENKREESE
IIKYYNKTDLLYLKNVVSNIVPSRDEFITIYKQALIKKEIDLDMVNIRETFNVIPLKFFTILNVFRELNL
LDFNLNYEKNSVLIRILPKPQKKLDLNESLILNNLKNLEKQYNSSY
>gi|260687981|ref|YP_003219115.1| putative ubiquinone biosynthesis protein [Clostridium difficile R20291]
MRISYRNLKRYREIGYVLIKYGFSFIVERLNIEGIAYKIPLFDPPEEIKNMTTGERMKRVLEELGPTYIK
IGQILSTRKDLLDQDIIDEISKLRDDVEKFDSNIAIDIFKEEVGLSIEEIFLEFKEEPIAAASIGQVYEG
VLKTGEEVIVKIQRPNIEKIIKSDLEILRTIANTLKDLKKDFNLDLVQMIEEFQTQLMRELDYTFEAINA
TKFSRIFKNSDEVYIPKVYSEYNTKKILVMEKVNGTKLSDVEKIRRLGYNTKTIVEIGVRSFFTQVLSHG
FFHADPHPGNIFVVAKNKIAYIDFGMIGIIDNKTLNQLNEIALAGVEKNVDKIIYLLIEMDALNGEADIK
GLRQDLLYLIHYYYDISIEKINVTDILNELFRFFRQYKIVMPAQFVTLAKTVITLEGTSRTLNTDFSFGS
MGKEFMKHHYKSKFNPKNVVLSSRQNVEEILLDIKTIPKQLKAILKNIERNNIKMQIEDVKMTRLENCII
ELTSQISLSLVLASIIVGSSLIIASPNIENNIWIKFTAIAGFFISFIIGLCLVIRSIRSKYKKD
>gi|260687982|ref|YP_003219116.1| putative transferase [Clostridium difficile R20291]
MIRDYLEDKPLIDESVFVAKSADVIGNVKIGKDSSIWYNAVVRGDEGPITIGENTNIQDCSIVHGDTETI
IGNNVTVGHRSIVHGCKISDNVLIGMGSIILDNAEIGEYTLIGAGTLITSNKKFPPGVLIMGSPGKVVRE
LTEEDKKYIDESYEWYLEAAQNQKY
>gi|260687983|ref|YP_003219117.1| putative radical SAM family protein [Clostridium difficile R20291]
MSMIHKFSMNGYNIVLDVNGGAVHVLDDVAYDLLDFYKEKSKEEILEILKSKYQEEKINEAYEEILNLEK
EGLLYTEDTYQYHPSFVHREPVVKALCLNVAHDCNLKCKYCFAAQGDFGGEKELMSFEVGKAAIDYLIAN
SGSRKNLEIDFFGGEPLMNFEVVKQLVDYGRSVEKDYNKNIRFTITTNGVLLNDEIIDYINENMHNVVLS
LDGRKEVNDNMRPTLNDKGSYDITLPRFKKLVEKRAKDKYYYIRGTFTRDNLDFSKDVMHFADLGFKLTS
VEPVVGDESNPYALREEDLPKIFEEYEKFAVEYADRQLQGDGFKFFHFMIDLNQGPCVIKRITGCGAGNE
YLSVTPNGDIYPCHQFVGNEEFKMANIFDEEIVLPENLKNMFREAHVYTKEECKQCWNKFYCSGGCHANA
INFNNDISKPYELGCEMQRKRTECSIMIQAKLMLEGATN
>gi|260687984|ref|YP_003219118.1| autoinducer prepeptide [Clostridium difficile R20291]
MKKFIVRFMKFASSLALSTAILSANSTCPWIIHQPKVPKEISNLKKTN
>gi|260687985|ref|YP_003219119.1| accessory gene regulator [Clostridium difficile R20291]
MFKRYAEKMTSVLICNNMIDNNESKVYSYGFEILIAFIVNITTMLFIGFLFGKFTYVLFFLMCYCPIRQF
SGGYHADNYFRCLLTFIFIILSTILIIENINIDLFKNIIMIIASVSWVGICVLCPIEHRSNPISDREKFV
YKKTAIFISTVVLLITILSLSLSIFVDYFTYSAFAMFWIFVMLVLGKLKAKV
>gi|260687986|ref|YP_003219120.1| hypothetical protein CDR20291_2641 [Clostridium difficile R20291]
MDIKNKIKSIFLPEKNDYLDDEEFEYDIENNEEDLKEDNKVHLNDLSRVKYDYRELKDIENQTEEMCLLA
VKQDGTIIEFVKDKTYKVCMEAVKQTYKALKYITNQNEDICIEAVKQNYRALYYINNKTENVLIEAIKNA
STYDVMEVFKFVEDQTEDVCLAFIERASKNDVAEILKGIKEQTPAICLEAVKKDGKSLAYVKEQSNSICL
EAVKENYSALSCVKEQTEEICIEAVKQNDFALYYVNEQTEKICMEAVKRSYMALQYVNKQTEEICLEAVR
IDGRALQYVKEQTEEICLESVRQNGKVLQYVKKQTENICIEAVRGSFEELEIKEILSYVKIPTERIFVEA
VKQNGKILKYVENQTELICLEAVRENYNALAYVKEQTEEICLEAVNQSYEALKYVKEQTEEVCLKAVKQD
YRMLKYVNNQTEKICLEAVKQNYRALEFVDNQTEKVCLEAVKQNRKALQYVKQKQS
>gi|260687987|ref|YP_003219121.1| hypothetical protein CDR20291_2642 [Clostridium difficile R20291]
MKGNIVQYNFADIEEEVYSLDYAIAWNTDEENVNIIPFTNKFCKESIESFCLGKINNFVEILNEGFVENH
HYVHLDKMISVPKKKVNLVYQQDTHGYLLRDDNDNLIPAKITSEQSKSISSKMELFCAGEEKCLINILLK
ADPSYILDVDSIKDKNILNLGYESIDRYKEYNFDDDKILIFFINKKRYSVIMKKTNNSDNDLVSRNNAIK
ELFTNKAGNLN
>gi|260687988|ref|YP_003219122.1| phosphoenolpyruvate-protein phosphotransferase [Clostridium difficile R20291]
MAYKGIGASPGVALGKALVVEHSELVIEKKSIDNVEAEIAKLEDAVAVSKEELVKVKEKASEELGAEEAE
IFEAHLLVLEDPELIGSAIDKIKTESVNAEYALNEIKEMFVSMFESMDNEYMKERAADIKDVTNRILRHI
LGIKVVDLSALSEEVVLIAHDLTPSDTATMNKKMVLGFLTDIGGRTSHTAIMSRTLEIAAIVGLNDITSK
VKDGDFVVFNGDTGEVIVNPDEETINKYTELKAKYEDERKALQLLKGKPSVTLDGKHVELAGNIGTPNDI
EGLIKNDAEGVGLYRTEFLYMDRDSFPTEEIQYEAYKAVLEGMDGKPIVIRTLDIGGDKELSYLSMEPEM
NPFLGYRAIRLCLDRKDIFKTQLRALYRASIHGRLRIMFPMISSLEELLQAKEVVKEVLAELDSEGVAYA
KDVEIGMMIEVPSAAVISDVLAKHVDFFSIGTNDLIQYTCAVDRMNQKISYLYNQFNPAVLRLIKTVIDN
AHKEGKWAGMCGESAGDQKMIPILLGMGLDEFSMSPISILPARKLITSVKESDMKKLADDVLNMGTAEEI
KSYIEKTFNI
>gi|260687989|ref|YP_003219123.1| PTS system, phosphocarrier protein [Clostridium difficile R20291]
MEKVVSIKNASGLHARPAGMFVKKAAEFKSTVEVVAKDKTVNAKSIMGIMSLGLAQGEELKLVVNGEDEE
VALAAMVELVESGFGE
>gi|260687990|ref|YP_003219124.1| putative phospholipase [Clostridium difficile R20291]
MKGLVLEGGGTKGAYQIGAYKALRELGIEFQGVTGTSIGALNGAYIIQNDIEVMEDIWLNYDYTHFMNID
RETYERFKNVDFTTKNLNAVFELINKARKNEGIDISPLRQLMETTLNEDIIRKSKKDFGLVTVWWDKKIN
PYPLYIEDIPKGRLIDYLIASSSLPIFQTNMMDDKLYLDGMFCDNMPIGLLEDKGYEDVVVIRLIDDFIG
KMNLNRHQNINIKTIIPSEYLGGSLNKDRDNVEKNIRLGYLDTMKAYERCTGIKYYFDVEYKYNEEYCFD
KFRSMSNETIQYICNLLNIKRDASLRTVMESVIPKLGEVLGLPKDFSYKDLFYCIYEKKLEENNINRIKL
YDFNKVIDVVNTNIDSNRNLASNFEVRPKISIKKNKNTKLLTNCIIKDIKNQS
>gi|260687991|ref|YP_003219125.1| putative DNA modification methylase [Clostridium difficile R20291]
MDDISQDNFLLSKEYENSLDVDTKKASGIYYTPKIIVDYIVKKTLKNHDIIKNPYPRILDISCGCGNFLL
EVYDILYDLFEENIYELKKKYDENYWTVDNIHRHILNYCIYGADIDEKAISILKDSLTNKKVVNDLDESD
IKINLFCCDSLKKKWRYKFDYIVGNPPYIGHKKLEKKYKKFLLEKYSEVYKDKADLYFCFYKKIIDILKQ
GGVGSVITPRYFLESLSGKDLREYIKSNVNVQEIVDFLGANIFKNIGVSSCILTFDKKKTKETYIDVFKI
KNEDICINKFETLEELLKSSKFEHFNINQRLLSDEWILVNKDDETFYNKIQEKCKYSLEDIAISFQGIIT
GCDKAFILSKDDVKLNLVDDKFLKCWIKSKNINKYIVDKSEYRLIYSNDIDNENTNKKILDEIIGLYKTK
LENRRECKSGIRKWYELQWGREKLFFERKKIMYPYKSNENRFAIDYDNNFSSADVYSFFIKEEYLDKFSY
EYLVGILNSSVYDKYFKITAKKMSKNIYDYYPNKVMKIRIFRDNNYEEIENLSKQIISILLNKSIDKGKV
EKLQIKMDNLIMDSLGI
>gi|260687992|ref|YP_003219126.1| hypothetical protein CDR20291_2647 [Clostridium difficile R20291]
MISEDVDYSIRIIRAIFNNGEDKPIDAKMILKSEDIPILTLYRLLRKLCANNILTFNKEDGKTYMLNVSL
DTISLRTIVEVIDGKIYINKCTRYVSNCSNCLKGCKVNRELLEIEKEIYKLLSRKSIRQILE
>gi|260687993|ref|YP_003219127.1| putative signaling protein [Clostridium difficile R20291]
MNKNSMTKIYSLNKIIFIIIGILGIVLLTRHIEVDIKVLILILLTLFSINVFISYLKIKLYEDKINLGLI
NNSDKFINITKDENFLKHVQNYIISNEKENCVMACFDLCRLKLINDIYGYELGDEVLNNILSNLKNYFGK
EAIYGKLKSDVFVLIIKLENREQKIPYLVNLIKNKIMILSQIDSFKMDINIEASIGIYKFNNNEIDIKKA
IDNADMARLKSKGLKHIEYVEFDNAMEEEIQSIMKIERDLFLAIKNKEFVIHYQPKVDSSTGNIIGSEAL
IRWLHPSLGMVGPNKFIPIAEKNGLINNIGRWLIQEVFITINKWISEGINVLPVSINLSRVELYKNDLVD
FFKLMFNTYNIPKELIELEITETTALRDVKFISERLYEIKSLGMNISLDDFGVGNSNFINLKGIPLDIIK
IDRSLILDIVTNTKTKFMVKAIINLSHDLNVTVICEGVEDMHQVKVLSELGCNFIQGYVFFKPLDEMNYK
KLLTDGSYINLKDTLLDKCMTVEEE
>gi|260687994|ref|YP_003219128.1| putative N-acetylmuramoyl-L-alanine amidase [Clostridium difficile R20291]
MKKKLLDGKITLIICKSVKIYTKKGEEMSKGNNNNNSRNKSKKTSHLNRKKRKLNKKKLAVLICFTVLFL
FIAFKATQGVVALVKSMDKSNKTSQQQKVNSEQFDLGNEEENKKKKYTVFIDPGHGGNDKGTESKTSNRY
EKDLNLQIAKKLANKLSKQKDIQVVVSRTDDTYISLKDRAILANNSSADVLVSIHLNAEKNGNTATGIET
WYRNKATDGSKELAQTVQSTIVSYVKVRDRGIVENNFEVLRESNMPAILIECGFLTTPSEEQKIINEKYQ
DQLAEGIVQGVLSYLDSKGNK
>gi|260687995|ref|YP_003219129.1| undecaprenyl pyrophosphate synthetase [Clostridium difficile R20291]
MRIPKHVGIIPDGNRRWASQNGMTKDKGYESGIDPGLESYRLCRDLGCEEVTFYGFTTDNTRRPSVQTKA
FTKACIDAANILIDEGAALLVVGNTKSPMFPEELLPYTNRIKAKEGQIKANLLVNYGWYWDLNNISGVEN
VNKNNIQDYIQSFDVSRLDLIIRWGGRRRLSGFLPVQSIYADFYVIDNYWPDFKSDDIKDAFSWYDTQDV
TLGG
>gi|260687996|ref|YP_003219130.1| putative lipoprotein [Clostridium difficile R20291]
MKKILILFFSIILSLGMVSCSSSGDYKNVSTSKIKKALKSSDLLIKESKIFDAKDFNYFNDVEEDIIQGF
VINSSEKLSLEDIIVIKTDEVDKIYKTLENYKKDMIQAPFGEGHGEKINSEIANNTIIEKAGRYVYLISA
ENATQIENKILNIIKK
>gi|260687997|ref|YP_003219131.1| putative hydrolase [Clostridium difficile R20291]
MIKLIATDLDGTLLDEKSEINPEFYKVFKKLRERGIMFSAASGRQYQNLIKKFEDIKDDMMFISENGTLV
VYKGKEILSNPLNKELVNEIIETTRSIKGKKIVMSGKKYAYIESKDEAFIQEVSTYYAKFKIVDDLTKVE
GDILKIAVFDFKGAEHNNNIYFEKFSDRAQVCISGVEWLDLTAKGANKGSAIKKVQKMLDIKYEETMVFG
DQLNDVEMMKSAYHSYAMENANEHLKQIARFRAKRNTENGVVDKIKEVIKIG
>gi|260687998|ref|YP_003219132.1| putative penicillin-binding protein repressor [Clostridium difficile R20291]
MSGLKKFVIFLALLVIAFPVSIYGYVFTKLKTIQDDSINTEALSSNDYKNEENITNILLLGTDARPGEEV
SRSDAMMILTIDNKNKSLKLTSLNRDTYVDIPGRGEQKLTHAYVYGQANLLIETIEENFQLDIQNYAVVD
FFSFMDIVDALGGVTVTVDKSEIRELNKFIPETYKWNKNDNKGSLKYIRNSGEQKLNGYQTLAFSRIRKN
DSTDERDRRQRSVIQSLINGVKDLPVTKYPNLVNTILPYVKTNMNPNEIISLGKELLSIGNLNLKSMEFP
LSTENGRKIGNAGYVIPFEEYELDAMHDFIFKDIMVED
>gi|260687999|ref|YP_003219133.1| putative penicillin-binding protein repressor [Clostridium difficile R20291]
MSKLKKFVILLAFLVVIFPISVYGYFYYKLSAIHDSSISSDLLDNNDHKNEDGIINILLMGTDARPNEDS
SRSDAMMILTIDNKHNDIKLTSLARDSYVDIPGHGKQKLTHAYAYGQADLLIQTIEENFNIDIQNYACVN
FESFMYIIDAIGGVEVTVEKGEIRELNKFIPETYKWNKSDDKGSIQYIRNSGKQTLNGYQALSFARIRHN
DTAFARDGRQRQIIQAIIKKTETLPVTKYPGLLDAVLPYVKTNMKPNAILSLGAQVLKMGDLNIKQFEFP
IDDEIHSTGGIYGKAGWVLRFDPDTLDILHDFIFNDIEFKQ
>gi|260688000|ref|YP_003219134.1| cell surface protein [Clostridium difficile R20291]
MKKISILVLSLIMTLTMCSVSSFADSSNDKEMRAAWISTVYNLDWPKTKNNEAKQKKEYTDLLDKLKSVG
INTAVVQVRPKSDALYKSNINPWSEYLTGTQGKDPGYDPLPFLIEEAHKRGMEFHAWFNPYRITMADESI
DKLPANHPAKKNPSWVVKHGNKYYYDPGLPEVRKYIVDSIAEVVQNYDIDGVHFDDYFYPGVSFNDTATY
QKYGKGQNKDNWRRENVNTLLRDVKASIKSIKPNVVFGVSPAGIWRNKSSDPTGSDTSGNESYVGTYADT
RAWIKQGLIDYVVPQLYWPIGLKAADYSKLVAWWANEVKGTNVDLYIGQGIYKQGQSSYGGQNIAKEIVQ
QVTLNRKYSEIKGSMYFSAKDIANSTSIQKDLKSLYSSSEEPVTPPSNVKVEKLRGDERYDTAVAISKKG
WATNSDTVVLVNGYSIVDGITSTPLATSNDAPILLVNKDNIPTSTKNELKRLNPSKVILIGGNNSIGDKV
ESEIKDTLSNVSINRVGGSDRYSTSLMIAKELVKTNPVEKLYITSGTGEADSLSIASKAGEEKQPIVLVS
KDNVSDEVYNWISDLKVKDAYFIGGNLSISDSVINKLDKVITNDVSKNRIAGENREETNGKVIQKFYPNA
EYSSMFVSKSNQLVDALTSGPLAAKLKSPVVMLGNSVTSAQKTALEPKKTALVYEAGDGINQNTLNTFLN
LVK
>gi|260688001|ref|YP_003219135.1| putative cell-wall hydrolase [Clostridium difficile R20291]
MMNIKNKKHILKKFIAMVLIAGVVTVEAGAITASAAEPTNSPMSATVDQCDFLNVRSGASANDAVVGKIN
TGDKVEVLELHSNGWIKIKSVDNVTGWVNGDYLTIQGGNVDAKVQNVLNLAFKQQGKPYRWGATGPNAFD
CSGFTSYVYKNGAGVNLPRVSRSQATVGKKVSRAELKPGDLVFFGSGGSINHVGLYVGDSKFIHSPQTGD
VVKVTSMAPGTNYARRLITATRVLQ
>gi|260688002|ref|YP_003219136.1| capsular polysaccharide biosynthesis protein [Clostridium difficile R20291]
MRESIDLEKESFFNRLFKKYKFRHLTLLILDICSVLVAFRMSLSLTGNLNAFTTNDIIISVCIYIVLHIV
SFRLFKCYNTLWRYAGEEEIISIFVATLAYLIPIYIINKLLGFDYPIMFYVLNTIFIIMFTSGARIAYRA
IRIVMNKTYSRGKVSNILIIGAGDAGEMVIQELKRNSELKKVAVAIIDDDKDKIGRIIHNVKIVGTTSDI
KAVVEKYNVDEIIFSIANIEKRRKKEIIDICKNTNCKIKTIPGIYEIIDGKVDIKQIREVEIEDLLGREP
IKTNLREISNYIEGKVILITGGGGSIGSELCRQIAGFNPKELIIVDNYENNAYSIQQELLRKYKNKLDLK
TVIASIREEKRMDEIFNKYKPEVVFHAAAHKHVPLMESSPGEAIKNNIFGTLNIAGLSSKYRAKKFVLIS
TDKAVNPTNIMGATKRAAEMIIQTMNAESQTEFVAVRFGNVLGSNGSVIPLFKKQIEDGGPVTVTHPDII
RYFMTIPEAVGLVIQAGAMAKGGEIFVLDMGEPVRILDLAKNLIKFSGFEPDVDIKIEFSGLRPGEKLYE
ELLMSEEGLLDTEHKKIFIGRPIDVDREKITKYLKLLREITNNEEVEKIDGIMRELVPTYIKPEDANIKE
IATTREK
>gi|260688003|ref|YP_003219137.1| putative capsular polysaccharide biosynthesis glycosyl transferase [Clostridium difficile R20291]
MKTVCYLADGSNPHTLKWCSFFKNKGYDIHVISLNGGHMEGIKIYNFGSNVEELKNENISKKTGYLGSIK
QIKKLVNEIKPDILHAQYASSYGFIGSLLGYHPYIISVWGTDIYDFPNNGFIQKQIIKHNFRKADYIFSN
SRDMAKEANKYTAKHVDVTFFGVDMDRFKPMEVEKEDAFVIGIIKSLEKKYGIEYLIQAFKMLKDEYKDK
KIILKIGGSGSQMDNLINLAKELGIENDVQFLGRISPENVSKTFNSFDVTVFPSLREGFGVAAIESEACE
VPVIVTNVGGHPESVWENETGLIVEPKQPEEIKNAIIKLMENDELRLNMGKKGRQFVRENYEVNLNFNDI
EKIYDSIFDKYKK
>gi|260688004|ref|YP_003219138.1| putative UDP-glucose 6-dehydrogenase [Clostridium difficile R20291]
MPLKKEYKFYILGGKKMKIAIAGTGYVGLVTGVCLAEVGNENVVCVDVDEQKVKSMKLGIAPIYEEGLEE
LMVKNYNRGRIDYTTDYKKAYEDVDVILIAVGTPERSDGSANLDYIKAVAKQIAETVTKDTLVVIKSTVP
IGTNEEIEDYINRNLKNNVKVELASNPEFLSQGTAVKDTLYASRIVIGVESEWAREILEEIYKPFNQPII
VTNRNSAEMIKYASNNFLALKISFMNDIANLCEIAGANIEDVALGMSYDDRIGSKFLKAGIGYGGSCFPK
DTKALHWLSEHNGYELKTVKAAIEVNESQKLKLVRKASKLVESFQDMKVAVLGLTFKPDTDDIREAPSIP
NIKYLLERGARVTVYDPIGVNNTKKIFGDSILYADSVDDAIEDAEICFIMTEWKDVLNYDIHKYKEKMKN
PLVLDGRNCYKIKDMEELGIEYYSIGR
>gi|260688005|ref|YP_003219139.1| putative teichuronic acid biosynthesis glycosyl transferase [Clostridium difficile R20291]
MNEPLVSIITPVYNSEEFLSETIKSIQNQTYKNWQLLLVDDCSKDNSSEIIKSFRKEDARIKYIKLEKNS
GAAVSRNVGIKNAEGRFIAFVDSDDLWDSRKLEIQIEYMLKENVGFSFTSYRYMRQDGSKTNKVARAPKK
IDYEGLLRNTIIGCSTVVIDKEIVGEFSMPLVRRGQDTATWLQLLKKEKYAYGIQEDLVNYRLVGNSISS
NKIKALKRTWNTYRNVENLSLPKSLYVFCFYVFNAIKKRV
>gi|260688006|ref|YP_003219140.1| putative beta-glycosyltransferase [Clostridium difficile R20291]
MYKYKFTVFTPTYNRAHLLENLYNDLKAQTYDFNDFEWLIVDDGSSDSTKELVEKFISENKLNIRYIYKE
NGGKHTAINLGVKNADGELFFIVDSDDGLIKDSLEIANDEWDSLENKEGFSGVVGLCVYPSGDLIGTEMP
EDKKICHFADLYFKYGVKGDKSIVFVTDELIKFPFPERKEVRFLPESVVWNEMSKYYKVICVNKPMIIRD
YLDDGLTKNILSKNALRGRALEFLYLINQNTYPLSRYPYMWIKNYINLARYSLLSDSHYFGELRKVSDKL
LYLALFPLGYYKYIGQRKLVSK
>gi|260688007|ref|YP_003219141.1| putative teichuronic acid biosynthesis glycosyl transferase [Clostridium difficile R20291]
MKKNLVSIITPMYNSEKFIEATIKSVLNQTYQEWEMLIIDDCSTDNSPNIVKSYMQQDSRIKCIKTETNK
GVSNARNLALSKATGQFIAFLDSDDQWNSSKLEKQVNFMLENDYVISFTSYELMDENDKKLNKVIKVPPN
VDYKRLLKGNILGCLTVVIDKSKLDFEIRMSGVRHEDYVLWLSILKKGHIAHGINEVLALYRKSSNSLSG
NKIKAAMWTWNIYRNIEKIPLYKAIYYFINYGINGIKKS
>gi|260688008|ref|YP_003219142.1| putative minor teichoic acid biosynthesis protein [Clostridium difficile R20291]
MRMVFMDKVKFLINMLLAFFIYPFNKHKFNGRDIWLIGGHSGDIYNDNSKFFYEYMLKEHNDVETYWVVN
KDSKVFDKIPGKKLIRGSVENYLYYYNSKAIVFSHAPSADIAPYNFAVPVLNYFHKKTIKVFLNHGTISF
KKRKPMNKKFKNIIDNLYKSYNIVTASSEFERNVMVNDWGMLDDSVYIIGNARYDNLPTNEVAQTRDILY
TPTWRDWIKFSSGKFTDTDYFKNIMNFLNDDKLNKILDEKDINVKIYMHHLMHEFIDDIKENITGKRIVF
LDKGVTLANEIRKSAANITDYSSVAIDFLYMNRPILFYQFDLDEYMEKVDSYIDLKSEMFGSLAYNNDEA
VNKLIDIIENNFEVMDNQKNERNKFFRYNDNKNCKRIYDCVLSKIK
>gi|260688009|ref|YP_003219143.1| putative glycosyl transferase [Clostridium difficile R20291]
MLISLIMPTLNRYDDIYLLMDSLENQTYKNFELIVVDQNDNSKVKEIVDKYIDKLDIKYIKSSKKGLSYN
RNVGIDNAVGQIIGFPDDDCVYENDTLEKVINFFNKNEDYKIYSCKTMDSNKVDAFKKMYDGTCDITSSN
VLDTITSITFFIDFEGKDYTRFDEKLGVGGEFGAGEEIDYVLNLLSLGFKGKYFGNDIIYHPAKKHSKSK
EKYQKDYNYGRGFGALCKKEIVYRKNYTFAKVMVSKLVRNIGGLILSSNRDYHSATIKGRINGFRQYKL
>gi|260688010|ref|YP_003219144.1| putative polysaccharide polymerase [Clostridium difficile R20291]
MKTLNDDRNIMIRKYLYIFVLFIILLRKYMISFIDPNIDIGMIKSALFYSSIGILMLLFLFDKRKSITEM
VLVGVCVLLYLLNREGAILLIVLLAVSAKQIDDKFIVKNYLIISACFLMVAILLFNLFPSLIFNQEVHYR
YIEKIDMLVTRMDFGLGNPNSVFYHMVTIYAAYIFLRYKDYNKWDRIILFGSAFFVYQTTYSRTGFFTIL
AGLIFVEIIRWIDIKKIKGLPMLLKTLPIILTLFSVIIGTIFDKSTLLNRLLASRPKFWHVYLAEKGNFL
KPFGNSYSPAIKATNPLDSSYVYIISVLGVVACILFMYLMYKGIESFIEKDKKAYLVALFIFLLYSFAEN
LLLEASFSFAVVLLIKEVILNDKREIDLWKMKSRR
>gi|260688011|ref|YP_003219145.1| putative polysaccharide biosynthesis protein [Clostridium difficile R20291]
MIPKKIHYVWFGGPKGNIENICINSWKEKLPEYEIVEWNEKNFDIEKEIKGNKFLEECYKRKLWAFISDY
TRIKVLYEQGGVYMDTDMQILKDITPLLENNRLICGYEDDREYINGAIIGVEKGHPFLKDLLEYYEKEVL
TSSLFTIPKIMTHLMEKNYKKIDPNNYEEGIRVYDKEYFYPFGFKEDFTPECITENTFGIHWWGKSWAKK
RNYFLESKHLTGVNKIWKCCKIFASNTLRS
>gi|260688012|ref|YP_003219146.1| putative mannose-1-phosphate guanylyltransferase [Clostridium difficile R20291]
MKVYNVIMAGGGGTRFWPLSRQEVPKQLINLSGEDALINETINRIDSLAKKDDLFIVTNEKQLEALKDIV
KDKCLDSNILPEPCARNTAAAIGFAAFNIMKKYGDGVMCVYPADHYIKDEKEFKSILEKAIYIAENNDKL
VTIGITPTFPSTGYGYINFNRENTIEDVAYEVVEFVEKPNYEIAKEYVNSKKYVWNSGMFVWKVSKILED
FKRYLPKVYEKLEYISKYLGTKEEMEKIKEIYPTIQSISIDYGIMERSNDVIVVPGDFGWNDVGSWDSLG
AIYPTDDEGNIKRGENITIDTKNSIIYSDDKLISTIGISDLIVVSTNDAVMVCRKDKAQDVKKIVEQLKE
EDRQEYM
>gi|260688013|ref|YP_003219147.1| putative phosphomannomutase/phosphoglycerate mutase [Clostridium difficile R20291]
MDYKNNYEMWLNSPYFDEQTKNELLSIKDDEKEIQDRFYKNLEFGTGGLRGIIGAGTNRINIYTVRRATL
GVLNYIMKTQGEEGKQKGIVIAHDSRYMSREFCIEVAKTLSAYGVKAYIFEELKPTPELSFAVRYLKCAM
GIVITASHNPKEYNGYKVYDSDGGQICIDMANDIIAEVNKIDDYSTIKSIDFEEALSKNLITILDNEVDD
EFIKAVKKQVLRQNIIDEYGKKLKIIYTPIHGTGNKPVRKVLNECGFENVMVVKEQELPDSNFSTVKYPN
PEEKSVFNIAIEMAKNNDTDLIIGTDPDCDRVGIVVKDSSGEYVVLNGNQVGSLLVRYILESLVEENKLP
KNNPTIIKTIVTSELGAKIAKAYNVDCLNTLTGFKFIGEKIKAFEESNDRSFIMGYEESYGYLIGTHARD
KDGVVSSLMICEMAAYYSSKGMNLYEALIDTYNKFGYYKEDLKSVTLKGIDGIKKIKEMMLYFRSVKIDN
VADVKVDKILDYKDGVDDLPKSDVLKFLLEDGSWIAIRPSGTEPKIKFYFGANSDNQEDVEFKLNNLISY
ILNVVDSI
>gi|260688014|ref|YP_003219148.1| putative transmembrane virulence factor MviN family protein [Clostridium difficile R20291]
MSKTAKAALWIMAATMFSKVLGFLRELVLANFYGTGMYADVFVLTLNIPGLIIAVIGSAVATTYIPMYFE
TKKRLGDEGALKFTNNVLNICYIMAIVIAIIGLLFTEQFVTVFAAGFRNDPAKFQAAILFTKIMISGVLF
LSGSKIFSSFLQVNDSFVIPGLIGIPYNIIIIAAIALSAGKNVWILPAGALLAMASQLLFQLPFAFKKSY
KYKPYINLKDESIKELVNLVLPMLVGVAVGQLNIFVDRLLATTLGDGKLSALNYANRLNEFVMALFVTSI
ITVIYPKLAKMSGKDDKEGFISTIVKSSNCIILVVLPISIGAIILAEPLVRILFQRGKFDALSTDLTSIA
LRLYSLGLLACGVRDVLYRAFYSLSDTKTPMINGSIALIINIVLNLILIRPLGHAGIAISTSTSNIITVI
LLFISLKKKNGYFGGDKIIKTGLKSLVASGVMAVATLLIYNNLYAFMGSGTIKEIISVGAGVLGGASVYT
VLIVLFKVEEMDLAFEFLRKGKQKLLRRR
>gi|260688015|ref|YP_003219149.1| cell surface protein [Clostridium difficile R20291]
MIKKISTILSLVLLISISSTIEVFADANPKRELIEGSIPEISTELNKRAFKDSKEVILVNEESIVDSISA
TPLAYAKNAPIVVTKSKNLGRVTRNYLKELGPEKVTIVGGLKAVSKDAERNIEKMGIKVERIRGKDRYDT
SLKIAREMYRTVGFDEAFLLSSTTGLENAISVYSYAAKSGMPIIWAKDEGFEEQIDFLKGKNLKKIYALG
DSKEFIAEIDSNLKNIEGIKQINKSSTNVDLIKKFYDEKDIKKIYTAKLDFGSRSDVNEYISLGVVSAKE
NMPILICSDNLSRAQDKFLKDSNINDVVEVGYTVGDYSLFKSIFNLTFLSCIVLILLLLLITFRALRYES
K
>gi|260688016|ref|YP_003219150.1| putative glycosyltransferase [Clostridium difficile R20291]
MEVTMSGYTNDECEIPKIKSYPGADKEIASEIDYSIVKGTVLFDLYQRIMDLVLSIIGLVIGLPLIAIFG
ILIKIEDKGPITYKQERLGKCGRRFYIYKLRSMRTDAEKFGAQWAEKDDPRITKVGKFIRKTRIDEIPQL
FNILKGDMGLIGPRPERPNFTVQFNEEIPGFINRLAIKPGLTGWAQVNGGYEITPEEKLKEDIYYIKNRS
ILLDFKILFKTVKVVLTGDGAR
>gi|260688017|ref|YP_003219151.1| cell surface protein [Clostridium difficile R20291]
MMKKTTKLLATGMLSVAMVAPNVALAAENTTANTESNSDININLQRKSVVLGSKSNASVKFKEKLNADSI
TLNFMCYDMPLEATLNYNEKTDSYEGVINYNKDPEYLNVWELQSIKINGKDEQKVLNKEDLESMGLNLKD
YDVTQEFIISDANSTKAVNEYMRKTSAPVKKLAGATRFETAVEISKQGWKDGSSKVVIVNGELAADGITA
TPLASTYDAPILLANKDDIPESTKAELKRLNPSDVIIIGDDGSVSQKAVSQIKSAVNVNVTRIGGVDRHE
TSLLIAKEIDKYHDVNKIYIANGYAGEYDALNISSKAGEDQQPIILANKDSVPQGTYNWLSSQGLEEAYY
IGGSQSLSSKIIDQISKIAKNGTSKNRVSGADRHETNANVIKTFYPDKELSAMLVAKSDIIVDSITAGPL
AAKLKAPILITPKTYVSAYHSTNLSEKTAGTVYQIGDGMKDSVINSIASSLSKHNAPTEPDNSGSAAGKT
VVIDPGHGGSDSGATSGLNGGAQEKKYTLNTALATTEYLRSKGINVVMTRDTDKTMALGERTALSNTIKP
DLFTSIHYNASNGAGNGVEIYYKVKDKNGGTTKTAASNILKRILEKFNMKNRGIKTRTLDNGKDYLYVLR
NNNYPAILVECAFIDNKSDMDKLNTAEKVKTMGTQIGIGIEDTVK
>gi|260688018|ref|YP_003219152.1| hypothetical protein CDR20291_2673 [Clostridium difficile R20291]
MIVCNNPGTWMRMYPQLRHAVWHGVTLADFAFPFFVISLGVTIPISINSKLKNNKSTLSIILSIFKRSIL
LILFGFFLNYLGNPDLNSVRILGVLQRMGLVYFVTSLVYLLLKKLNVGSTATIITFLCIATFIIVGYYIL
AKPYGFELEGSLAQLVDLHFFKGHLYKPEFEPDGFLTSIVAISSGMLGCTMGCVLLKENIGEYKKFFKIL
VMSIILLIGAFIFNQYFPFNKRLWSSSFVLLMAGSYGMLLSIFYFICDIKNKSKIFTPIIALGSSPIFTY
MCLEILSHVFWNVPKLTNKVDYPTTLVEWTTYELITPWAGTTWDSLIFSLLYVLFWVIVMSIMYKKKIFI
KI
>gi|260688019|ref|YP_003219153.1| hypothetical protein CDR20291_2674 [Clostridium difficile R20291]
MRAIDSPLIISIDLILLFVSLESTTLFEILLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLFRLFFFILVLSILLFIFLLHSI
PIPMLPPQSLFKYILNYIFIYKSVCI
>gi|260688020|ref|YP_003219154.1| cell surface protein [Clostridium difficile R20291]
MKAPKTILTILTIALTLSSISIIPSYALTEEKLIGNGRYETAVKISQKAYSSSSNVVLVNDNSLADALSA
TPFAKAKGAPILLTESDKLDDRTEKEIKRLGAKDIYLIGGTAVLNKDIENKLKGNGLNVERINGKDRYET
SLILANKLKDIKDIKEVAVVNGEKGLSDAVSVGAPAAQNKMPIILSSPKDGVEAFDKFIRDEKVIKAYVI
GGTNSVSRAVEKSLPNAERVSGKDRNETNAKVIEKFYTDTNLSNLYVTKDGSKNENQLIDSLAVGVLAAK
NESPVVLVGNKLNTKQRDILSTKKLNTITQVGGNGNEEAFDEIKSLQEKTVFEAKTVEELTDMINIASPN
DIINFKPKENTVNEAFRMVTNKPITVNIKGDCSKTLTVDMPNGEVNNYATLVNVIVRNIGEGGFNNHDTI
TILSVRDKNGRVIENTRNSDIDTLMILASANDTKLINDGYIGKLIDNSSNSDITNNGTIDKKVNQVENLE
AKVDSIEKAIDSISQKVNKIQDILDKIGFLKKFLS
>gi|260688021|ref|YP_003219155.1| cell surface protein (putative cell surface-associated cysteine protease) [Clostridium difficile R20291]
MRKYKSKKLSKLLALLTVCFLIVSTIPVSAENHKTLDGVETAEYSESYLQYLEDVKNGDTAKYNGVIPFP
HEMEGTTLRNKGRSSLPSAYKSSVAYNPMDLGLTTPAKNQGSLNTCWSFSGMSTLEAYLKLKGYGTYDLS
EEHLRWWATGGKYGWNLDDMSGSSNVTAIGYLTAWAGPKLEKDIPYNLKSEAQGATKPSNMDTAPTQFNV
TDVVRLNKDKETVKNAIMQYGSVTSGYAHYSTYFNKDETAYNCTNKRAPLNHAVAIVGWDDNYSKDNFAS
DVKPESNGAWLVKSSWGEFNSMKGFFWISYEDKTLLTDTDNYAMKSVSKPDSDKKMYQLEYAGLSKIMSN
KVTAANVFDFSRDSEKLDSVMFETDSVGAKYEVYYAPVVNGVPQNNSMTKLASGTVSYSGYINVPTNSYS
LPKGKGAIVVVIDNTANPNREKSTLAYETDIDGYYLYEAKANLGESYILQNNKFEDINTYSEFSPCNFVI
KAITKTSSGQATSGESLTGADRYETAVKVSQKGWTSSQNAVLVNGDAIVDALTATPFTAAIDSPILLTGK
DNLDSKTKAELQRLGTKKVYLIGGENSLSKNVQTQLSNMGISVERISGSDRYKTSISLAQKLNSIKSVSQ
VAVANGVNGLADAISIGAAAADNNMPIILTNEKSELQGADEFLNSSKITKSYIIGGTATLSSNLESKLSN
PTRLAGSNRNETNAKIIDKFYPSSDLKYAFVVKDGSKSQGDLIDGLAVGALGAKTDSPVVLVGNKLDESQ
KNVLKSKKIETPIRVGGNGNESAFNELNTLLGK
>gi|260688022|ref|YP_003219156.1| putative cell wall teichoic acid glycosylation protein [Clostridium difficile R20291]
MILKKHRETILYLFFGAFTTLVNIVSYLFFTRVILFNFMVANALAWILAVLFAYVTNKFFVFESKRIEIR
FVFKEFLSFVSFRLLSGVVEMLIMYVMIDLLFVNDVIVKIFTNIVVIVLNYLFSKMIIFKK
>gi|260688023|ref|YP_003219157.1| cell surface protein [Clostridium difficile R20291]
MKISKKIVSLLTMTFLTVTLYGNTSNASTKDTLTGSGRWETAIKISQAGWKKSENAVLVNDNSIADALSA
TPFAKAKDAPILLTQSNKLDSRTKAELKRLGVKNVYLIGGSIALSSEIEKQLNAENISFERISGNSRYDT
SLKLAEKLDREKSISKIVVVNGEKGLADAVSVGAIAAQENMPIILSDSENGTEVADNFIDSKDIEKSYVI
GGTYSISNSVERSLPNATRIAGSSRSETNAKIIEEFYKDTDIKNIYVTKDGTRSKHDLIDSLAVGVLASK
NGSPILLAGNKLDSSQKDVLNTKIIDKVIQIGGLGNENVVEDVIDMQEETKYTVETIDELNVAIKKSDAN
DIIRFKPEKDKNITNSFKIETNKAITIEFDGIYKQSITIDMPNGDIKNFGDIDNDLVINNIKNETLVNEG
SIQGIDVYDENGCKIENEDSGEIWLITILKNSKDVYILNRGEITKISNNSSSVTIKNSGNINTISGSEEP
SISGKKPITNDTDKDEDKKARGLYPKVESCIPALKDYVRITISTKPESSKYKIYYRVVDEKPSAKYVGEK
ISTKGWSMVTISNQSFIERAKDGSYIEAVEIDTSNNEVSRWGKSSITDDGI
>gi|260688024|ref|YP_003219158.1| hypothetical protein CDR20291_2679 [Clostridium difficile R20291]
MVDATLFFTPHQDDETLSMGSAIIEHVEKSDTHVILCTDGSKSIIRKVLDDGGSCSYHIKDVHKYSLSES
EFSKDRDEEFKDSCEAMGVKESNIHIEDNRAHDGELSKEKAREIILKYLEEYPDAKVKTVTPFKASGIHE
DHRALGEAALELYKEGKIKDLRFYVEPYDYKDFKKVNPNVEVWKVLPSQEEKLLSAMNAYKKWNPESGHY
AIGYHSVKSHFDELAINKIQYVHAP
>gi|260688025|ref|YP_003219159.1| cell surface protein (putative S-layer protein precursor) [Clostridium difficile R20291]
MNKKNLSVIMAAAMISTSVAPVFAAETTQVKKETITKKEATELVSKVRDLMSQKYTGGSQVGQPIYEIKV
GETLSKLKIITNIDELEKLVNALGENKELIVTITDKGHITNSANEVVAEATEKYENSADLSAEANSITEK
AKTETNGIYKVADVKASYDSAKDKLVITLRDKTDTVTSKTIEIGIGDEKIDLTANPVDSTGTNLDPSTEG
FRVNKIVKLGVAGAKNIDDVQLAEITIKNSDLNTVSPQDLYDGYRLTVKGNMVANGTSKSISDISSKDSE
TGKYKFTIKYTDASGKAIELTVESTNEKDLKDAKAALEGNSKVKLIAGDDRYATAVAIAKQTKYTDNIVI
VNSNKLVDGLAATPLAQSKKAPILLASDNEIPKVTLDYIKDIIKKSPSAKIYIVGGESAVSNTAKKQLES
VTKNVERLAGDDRHMTSVAVAKAMGSFKDAFVVGAKGEADAMSIAAKAAELKAPIIVNGWNDLSADAIKL
MDGKEIGIVGGSNNVSSQIENQLADVDKDRKVQRVEGETRHDTNAKVIETYYGKLDKLYIAKDGYGNNGM
LVDALAAGPLAAGKGPILLAKADITDSQRNALSKKLNLGAEVTQIGNGVELTVIQKIAKILGW
>gi|260688026|ref|YP_003219160.1| preprotein translocase SecA subunit [Clostridium difficile R20291]
MSVLDAILDKADEQEIKKLNLIVDKIESLEKDMEIKENEQLKEMTNTFRLRLDKGESLDDILPEAFAVVR
EVSKRVLGMRQYKVQLIGGIVIHQGKIAEMKTGEGKTLVEVAPVYLNALTGKGVHVITVNDYLAERDKEL
MRPVYEFLGLTVGVILSNQDPSIRKEQYKCDITYGTNSEFGFDYLRDNMVPDLSHKVQRELNFAIVDEID
SILIDEARTPLIIAGDGDEDLKLYELANNFVKTVKEEDFEMDRKDKTIALTASGISKAESFFGITNLTDI
KNIELYHHINQALRGHKLMEKDVDYVISNGEVMIVDEFTGRVMDGRRYTDGLHQAIEAKEGVEIKNESKT
MATVTYQNFFRLYEKLSGMTGTAKTEEGEFESIYKLNVVQIPTNRPVIRADLHDKVFKTEEEKYSAVVEE
IIRIHKTRQPILVGTVSVEKSEKLSKMLKKQGIKHQVLNAKQHDKEAEVISKAGKLDAITIATNMAGRGT
DISLGAGDKEEEEKVKNLGGLYVIGTERHESRRIDNQLRGRSGRQGDPGTSRFFVSLEDDVIKLYGGKTI
EKLMKRTSSKENTAIESKALTRAIERAQKGVEGKNFEIRKNVLKYDDTINEQRKVIYNERNKVLNDEDIK
EDIQKMVKDIIQEAGETYLIGRKRDYYGYFKHLYSTFMPADTLLIPGVDKKSVQEIIDSTYEISKRVYDL
KKMMIGIDKVAELEKTVLLKVVDQYWIDHIDAMEQLRQYIGLKSYAQKDPFKEYALEGYDMFEALNKNIR
EATVQYLYKFN
>gi|260688027|ref|YP_003219161.1| cell surface protein (S-layer precursor protein) [Clostridium difficile R20291]
MNKKNIAIAMSGLTVLASAAPVFAAEDMSKVETGDQGYTVVQSKYKKAVEQLQKGLLDGSITEIKIFFEG
TLASTIKVGAELSAEDASKLLFTQVDNKLDNLGDGDYVDFLISSPAEGDKVTTSKLVALKNLTGGTSAIK
VATSSIIGEVENAGTPGAKNTAPSSAAVMSMSDVFDTAFTDSTETAVKLTIKDAMKTKKFGLVDGTTYST
GLQFADGKTEKIVKLGDSDTINLAKELIITPASANDQAATIEFAKPTTQSGSPVITKLRILNAKEETIDI
DASSSKTAQDLAKKYVFNKTDLNTLYRVLNGDEADTNRLVEEVSGKYQVVLYPEGKRVTTKSAAKASIAD
ENSPVKLTLKSDKKKDLKDYVDDLRTYNNGYSNAIEVAGEDRIETAIALSQKYYNSDDENAIFRDSVDNV
VLVGGNAIVDGLVASPLASEKKAPLLLTSKDKLDSSVKAEIKRVMNIKSTTGINTSKKVYLAGGVNSISK
EVENELKDMGLKVTRLAGDDRYETSLKIADEVGLDNDKAFVVGGTGLADAMSIAPVASQLRNANGKMDLA
DGDATPIVVVDGKAKTINDDVKDFLDDSQVDIIGGENSVSKDVENAIDDATGKSPDRYSGDDRQATNAKV
IKESSYYQDNLNNDKKVVNFFVAKDGSTKEDQLVDALAAAPVAANFGVTLNSDGKPVDKDGKVLTGSDND
KNKLVSPAPIVLATDSLSSDQSVSISKVLDKDNGENLVQVGKGIATSVINKLKDLLSM
>gi|260688028|ref|YP_003219162.1| surface surface protein [Clostridium difficile R20291]
MKVNKRVLSIGLTISLIMAGAPNINALSSIEKIQGKDRYETAAKIAQKQTYENVVLVNTDNTLADGLSAS
GLAGTVKAPILLSQRNSIPSDTEKMLKDVKKVYIIGTEDSIGKSVENELKQKGIEVKRIGGNDRIETSYL
IAKEIASIKPIDKVFITNGYTGEADAMSASSVASRDGSPIILTNGKNVPFEKKEGVQCYALGSEEIISND
LVKKTNAVRLAGEDRFETNKKVIKHFYSSAKEFYLSKGYQLVDAVAGSSIAKNAPIVLVDGNSDKSVLRS
ADKITALGGIDEKTLEQCLSASSLDASAPTITVGNLNIYQGDKFDISKLNIVAKDSNGNDLTPELIGNID
TDKVGKYKVTIKATDIGGKTTSISVEVNVLEYKTNDMNSSEFKRMVSSEMYSLVNSYRKEKGKEPLQVSK
NLEGLSNSWSKYMADKGQFSHVINGKKSVEVFTGYGLRSEENIAFVPLVTKSTYTTKDAREVANVIFTVW
KKSDKYNENMLNSDFVYTGFGLYILPNGEVYATQEFLNK
>gi|260688029|ref|YP_003219163.1| cell surface protein [Clostridium difficile R20291]
MKMNKKILSLGLAVSLILVNFKSVNASSVVEKIYGKDRYETAAKIADRQTYETVILVNTEKSLADGLSAS
GLSGATKAPILFTQQNKIPADTNRCLKNIKKAYIIGTEDTISKSVEKELDSKNIEVKRIGGEDRLKTSYL
IAKEIATIKKVDKVLLTNAYSGEADAMSVSSVATRDGAPIILTDGKSVPFDVKNIQSYCIGSEEIMSNPL
VKNTNSVRIEGTDRFETNKNVIDYFFNSADGFYVSDGYQLVDAIAAAPLTKNSPMVLVNDGSDKTVLEGA
KNITSVGEINEKVIQQCINASKSNGQPPTITVGSTEIYKGEKFDTGKLNIVAKDNTGKVLPIEVDGFIDT
NRVGTYILTLKATDEWGKSTGKRVEIKVLDDKSYDYNSPEFKKMVSTEMYNLINSYRKEKGKEPLVVSSR
LEGMANAWSKYMMDKKVFAHYIDGKNAPQVFSEFGMRSEENIAYIYIDSKNVQTTQDAKNLAKAIFEVWK
KSPEYNANMLSDEFYSTGFGLYILSDGQVHATQEFLNGNEGSL
>gi|260688030|ref|YP_003219164.1| cell surface protein [Clostridium difficile R20291]
MSKRKSFIRTIAVSTMAVAVTGSVTCAYAAPVLQGTKTYEKVNTIDISVDSVENIVYSFQASIKVQGEVE
VVDNEQKEKITWSDNIKSQIKSGNANATCRVEYNKSSNTTTLDIYVTSNEDLLDGNRLNIGRISVKKSGS
NSNADYKVLGKGTSDKPALKIVTYNNKTVDYENINSDEGLIFTLINESEVKPIGGTGSSKNDPEKYKVEK
SEALEYLLNNIRINYSIVSKETQESGSNVILKLGLAQKITKGRKATINKYVEVTLPKSLEYIVENELSKP
DELPPDNGNGGNNGGGSNSGGSSSGGSSGGGSSSNSTSNVTVKKLKGADRFETATKISQSGWTKSDTVVI
VNGEDKSMVDGLTATPLASVKNSPILLSSNEKLPQKTVEELKRLNPSKVIVIGGNNSMPNSVVEAIKAVN
SKISVQRIGGDTRYQTSINIAKEIDKTNNVSKLYIGAGNGEADSLSIASLAGKEKTPIVLTQKDGVDNEA
VQFIKSNKVSNIYFIGGIEKISNKAIEQVGKIANKDISNNRVAGQTRQETNAKVIDKFYSQSKLDGVVVA
NQDKLIDALAVGPLAAKNNSPVILATNTLDKSQESSLKGKNSSKLFEVGGGIASSVVDKIKSLIEK
>gi|260688031|ref|YP_003219165.1| hypothetical protein CDR20291_2686 [Clostridium difficile R20291]
MKKAISCVLAVSMCSAPLNVFAEPILEGKLRAVEKSVTEKLRGNLEVDLNFSLPIKNSESESMTNMQLRL
KDDSNNSGIIKLGEKDSGTVNIGTDNIEYTIKKLSASRSEIKNKDENVSYYNIVFNNLPVGKYNIEVSGA
GFKNKEIKDIDISSYSQRVLLSNRASVDNKNKPLNYELFLMGDVNGDGKVDKSDYNKVLENIDSNKREFD
LNRDGKVDIVDLDYVQKNLGQSEDAKSLESIVSTNPIVDTSKVELKGNSDVDINGNVENLFSGENNGVTI
SSKNDEISEEKPAVMDIALSEALNMEVINIKAPEGTAPAKGIVEVTDEDGNVQQIPYENKEYMKNLKDKE
QQEEVNNEQEEVNQEEVNNKDENKNQTDNNSNNKDENNDKQQENSDKQEVNSNTNQDKNNDKENSSMDKP
NSDEDTPKEGDNISKDDNSTTSTYSRAALETYTDVQNSDIVINLGKQVAVKKITIKITATTANDRNLAEI
SKVEFLNNVYKEIPKPEMNIPKINKISTSTAVGNEKVSFYWNNEVNVSAYELILDKIDSKGKVLSTKKLQ
TSKNTIEVRDIEAYGLYRVSIQSLNGDWSSGYKDATPENLDGVPENVDSNYKPIQFSPDSILEFQVVPDT
KPEPPEGINVKGKFKSLDVSWKNHKQAKDFDLYYKEKGSNGSWIKYNDKLIRGTSLKIEGLKDNTTYEVR
MTATNHLGTSGMSKTYIGTTESIDAPTTPNYRLINTPKENGGFGIPTNHIVDVVYPAGYDKSEYSDKNPF
DKFNVVDGDFTTHWTFPTYNAAEGTNRGPIITFDKSYTMDTFMATPRFDVSDKTINDFEIRYWDENGQLH
NLGDVPFETKTDPVNNNKYVMVRLKEPITATKIQVSVCSSYSYKSNISELKFYEYDSIEDDVRNLFMDDL
QVELKEDVTQEKITELKDRLNTPDKASGEYHPYKTVIDRELKLAQDLYNDRATLTDVTTVNQEINKSGKY
KDKNGQYTVNSNNLGMQNDWQALGVAARAGDEITVYVGSKSGKTPKLIYTQYYGESGAYKSGEINLKTGK
NVIQLSKLHSLDIECGGSLYIRYPEDTPSGGDIKVRVAGATKIPHLNLNGTINDKSPAGVSESKKKIKAY
IEELAKYKDAVKGEPYYPGTNIGNSYEYSEKTGVLNTTDIESDKVTLNVPATAVYQGISKGNADLNTQVD
RLYNSMLAWEQIMDLVYSERGVFKTQDLDGNGTVDDNEFNLTKNDMAPKSRMNIKYQRMFIGAFMYASGL
HVGVEYGSVPGLMNGVPFQIDDSGKATGGNLFGWGIGHEIGHVTDIGKMTYSETSNNVLALLAQTFDDKT
HSRLEGSTMDKIYEHVTSNSLGIPSNVFERLGMLWQLHLAYDDDFTGSMLKNNSDADLSNDTFYAKISRK
YRALSSSDPINSLPKDQMLVAMASSVVEKDLRDYFKAWGVEITPELNSIMDSKNYEKESRKIQYVNDEAR
RKILNENIASMAKDTKVSASFSDGIQSGSLVKSNKISIDLDVDKDKDKILGYEIIRSDGNYLDGENGTQV
KYRTVGFVDAKGNSKAKFTDSISPLNNRAFTYKVVAYDYHLNPTEEFEVGTVKLSDEGKINKSAWSFITN
TVSDGDVRTENDSHGPLQNPEIDNIKDNDVSTTYKGKIISKAEWNKDPQKDPDINVEENPYIIVDMKETL
PIVGLKYTKPEAETRKFSLKGLFNFRKNTSTTYNPLTNYKIQVSNDKKNWEDVSQGTFEYGQDLVGGGKD
QDNEARVTFNKDDKLWTYQARYVKLISNNKSNIEVAELDIIGPPGDNIEIGTMNNADQTRTNGIGKLAED
YVYQSDDPSTSEDETGKIPAGSIIITGEYSGNPAFNLPLLIDKNNKTISGEALLFAEVPEKGELGEISKG
TWVYYMPKENFDSLSDKVKAELYRYNDLQGDTPVGQRFVSDTMYVPVGAKNYDELKTISLTDSNSKARKA
TRNAIDVSNKKVITVSNKVKGNIVRDK
>gi|260688032|ref|YP_003219166.1| cell surface protein [Clostridium difficile R20291]
MKSTLGVENNMKNSKKILAIGLTLFLVMVNTPMVNALTSVEQIKGNDRYETAAKIADKQNYNTAILINSD
NSLADGLSASGLAGALNAPILMTKQNQIPNTTMERLNKAKTVYIIGSESTISKNVENQLLSKKKVVQRIF
GENRFDTSIKIAEKIKEIKPIDKVIIANGFTGEADAISASPVAARDGVPIILIDGNSVGFDTTGLKSYAL
GSSEIISDELVKSTNSIRLGGTDRFETNKIVIQEFYKNSKEFYLSKGLQLTDALVASTIAKNAPVVLVEN
GSNKSILSGADKLTVLGGINQNVIKQCINQASPNQQGLYYNPNDRAFKERIKGKVYALTKQYRKDNGVRA
LSVASRLEGLANDWSNLMANKKTLSHTINGKNSYSTFLKYLDWSEIKPGYIAVQGENIIKYKISDKPVYT
NRDADDIGNFIFNEWKTNPEEGTNMLHKGYEIMGFGIAITGDKNLYATHEFYGRYKE
>gi|260688033|ref|YP_003219167.1| cell surface protein [Clostridium difficile R20291]
MLSNKKRSMAIVMAGATVMSAAAPIFADNTVTENVDKNYTVSAKDSAKLIEEVRKALEVKFEDTKAGANV
NDRVYDIKVDNVNLTNATQLQNKINSLTEGQSLKVTIQDKGHQVLGGKVVDYKIENYKTAQEIVDAVNAY
NATLAEDSDNKLTATIKSTNTVEVKRAKDSANVITLNVGDQHLDFSKVITSEEGTFEGYEKSYSDIDSKE
LHTITVKNADLQDISAEELFDGIRLTTLGREIVNKVKNGYALTFENEAILTQEQEDSDDKDKPEKSSFDI
VLSKANEKSETISVSSKNHKLVRDLHKVLTDVKDGKELKVEVLSGDSRFTTAVEVSKERFKDGEAEAIIL
VGEDAIVDGLASAPLASQKNAPILLSKKDSLPSEIEAEILRVLGSNLSSKKIYIVGGESKVSKETEEKLS
KLGVSKVERVSGEDRFETSLEIAKQLKDTFKTAFVVGGNGEADAMSISARAAQFGAPIIVTGNELDANAE
KLLKGKELEIVGGENSVSKEVEDKLVDIDLNNKVERLAGENRKDTNAKVINKYYAGATKAYVAKDGYVGG
NGQLVDALTAAPLAASSKAPIVLTTEELSKSQEEVVELRLKNATKLVQIGEGIAKNAIEKIAEKINLFTK
N
>gi|260688034|ref|YP_003219168.1| hypothetical protein CDR20291_2689 [Clostridium difficile R20291]
MRGGFFMGKSNYIFKGLGYAYIITLAVLLVYNLFLTFTDIGGDNITMVSSFITTISAAIGGFYTSKHMKE
KGLMYGLLVGLLYIVCIFLTVFLAQEKFVFEVGMIYKLLLISAAGGIGGVLGVNFK
>gi|260688035|ref|YP_003219169.1| putative protein translocase subunit [Clostridium difficile R20291]
MPQQQIIMSIGLWVVVIAIFYFLMIRPQKKKDKQLKEMRSSLSVGDKVITIGGIVANVAKVEDDVVILEL
GPNRTKVPFEKWAIGTVKSKKEEIEED
>gi|260688036|ref|YP_003219170.1| queuine tRNA-ribosyltransferase [Clostridium difficile R20291]
MVKENFMYAVRYELIKTCKQSGARLGRLHTPHGIIETPIFMPVGTQATVKSMTPEELKEIGSQIILSNTY
HLYMRPGHELIKRAGGLHKFMNWDKPILTDSGGFQVFSLGPLRKIKEEGVEFRSHLDGSKHFLTPEKAME
IQNALGSDIMMAFDECAPYPSDREYVKNSLERTTRWLKRCKDAHNNTDKQALFGIIQGGMYKDLREQSAK
EITSIDLPGYAIGGLSVGEPKPLMYDVLEHTTPLMPQDKPRYLMGVGSPDDLVEGVIRGVDMFDCVLPTR
IARNGTAMTSQGKVVVRNATYAEDFTPLDPECDCYACKNYSRAYIRHLIKANEILGARLITTHNLHFLLN
LMKQIRQAIMEDRLLDFRNEFFAKYGYEI
>gi|260688037|ref|YP_003219171.1| hypothetical protein CDR20291_2692 [Clostridium difficile R20291]
MHSLQKQKKNNPILKIAFIFERVLAVVVLIAVFLGTIDVLRLMWGAYIVDFQNPVQYSQLNDFLAQILLL
VIGVELVVMLSLHIPGAFIEALLYAIARKMLLLPKNEGMIDVLIGVIAIAGLFAIKKFLVTKDKSALNIM
SIHDEEAIKEQQNKEDEDKSI
>gi|260688038|ref|YP_003219172.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium difficile R20291]
MKTSDFKFDLPQELIAQVPIEDRASSRLMVLDKETGNIEHKVFRDIIEYLNPGDCLVLNNTRVIPARLIG
EKLETGGKIEFLLLKRTEEDTWQALVKPGKRAKVGTKFSFGNGKLIGEVVDLSDEGSRIIKFLYDGIFEE
ILDELGNMPLPPYITARLDEKERYQTVYSKHNGSAAAPTAGLHFTEELLNKIKEKGVDIAFVTLHVGLGT
FRPVKVEDVLNHKMHSEYYMVSQEAADKINRAKENGNNVICVGTTSCRTIESACNEDGKMKETSGWTEIF
IYPGYKFKVLDKLITNFHLPESTLIMLVSAICGKDNVLNAYNEAVKERYRFFSFGDAMIIK
>gi|260688039|ref|YP_003219173.1| holliday junction DNA helicase [Clostridium difficile R20291]
MQGFEDENRIITSTMKMEDIDIENSLRPKTLEDYLGQEKSKEQLSIFIEAAKSRNEQLDHVLLYGPPGLG
KTTLASIIANEMGVNLRITSGPAIERAGDLAAILTNLNENDVLFIDEIHRINRSVEEVLYPAMEDFCLDI
IIGKGPSARSIRLDLPKFTLIGATTRAGMLTNPLRDRFGVICKLDYYTVDELSKIVLRSSSILDAEIQSN
GALELAKRSRGTPRIANRLLKRVRDFAQVRADGKITDKVAKDALELLGVDSLGLDFVDEKLLMTIIEKFR
GGPVGLDTLAASIGEDRNTIEDVYEPYLLQLGFINRGPRGRVAMPLAYEHLKIPYPNEK
>gi|260688040|ref|YP_003219174.1| holliday junction DNA helicase [Clostridium difficile R20291]
MYSYIKGTVEEIYIDSIVVENNGIGYKINVSSNTIMNLQVGEATKIYTKLIVREDDMSLCGFVSREELKM
FELLTSVSKIGPKVALSILSFASSAQLGAYILSEDIGKLSKAPGVGKKTAERIVLELKDKVDKNNIEFEP
TLLSQKPTLISQDESVDALVALGYTLSESKEAVQKCKKDGMNTEAIIKKALTYIMSKSLK
>gi|260688041|ref|YP_003219175.1| crossover junction endodeoxyribonuclease RuvC [Clostridium difficile R20291]
MIILGIDPGIAIVGYGIIEYKNSKFKVIDYGAVTTPAHMNISRRLELVYKGIDTIVKNYNIDEVGMEELF
FNKNVKTAITVAQARGVTMLACAHNGKPVYEYTPLQVKQGVVGYGRADKAQVQQMVTSFLSLKKVPKPDD
VADALAVAICHAHSNKLEKTLKNIGGKYV
>gi|260688042|ref|YP_003219176.1| hypothetical protein CDR20291_2697 [Clostridium difficile R20291]
MFEKKKKELFPWKISALILVGVFVLSSGVYIGTRLKNNGVQTSKVVSASANMDEKSKEAFGLNKNCEVWL
QSEGENETNYKRTLTMAGIVPESLLDKTKSEIVSYFKKEYPTKKIKSMDKNEIILVESKYSDNKDVQAMN
ATIKGKYTIENDNGNIALYKYDDSGSKTLVEKTKIRVDSLPKTVQDEIKKGVVMDTEEEAYSRLEDFAS
>gi|260688043|ref|YP_003219177.1| hypothetical protein CDR20291_2698 [Clostridium difficile R20291]
MERINCNVINCSHNNSHICYADKIFINGEKAHNDRHTCCSSFLDESIYSNLSSNVNNRNCEELVCTVKNC
KYNKDGSLCTLDNILVAPETDRVNLYIETCCSSFECK
>gi|260688044|ref|YP_003219178.1| hypothetical protein CDR20291_2699 [Clostridium difficile R20291]
MSTFYIQFLYFVIYSFIGWCCETTYCSVLQKQFVNRGFLNGPFCPIYGFGALAIVATLTPFVHNIPLLFL
FSIIITSIMEYCTSFILEKIFNMTWWDYSKHKFNIHGRVCLENSLMFGVLSLIVMLIVHPIVVDFINSIS
KNVLFIFAISIEIYFVLDLVITVHTILQLNGKLKQINLIIKELKDKKEYYKLITQETIENKLESLVENRL
DTLEDRFEILKEKENYRYAKNRIDELKNKLNTLLSNHKLLHRRIIKAFPNISSNKHTDILNKIKENIKSI
KKDK
>gi|260688045|ref|YP_003219179.1| hypothetical protein CDR20291_2700 [Clostridium difficile R20291]
MREVKPISIDILNTFKQVDEDRLNELLADELKHLDRKIVVLDDDPTGVQTVHDISVYTDWDKDSMEQGFN
EKNSMFFILTNSRGFTVAQTTKAHKEISKNIVDVSKKVNKDFIIISRSDSTMRGHYPVETNLLKSEVERL
SGKLFQGEIIMPFFKEGGRFTIDNVHYVKEGEILVPAGMTEFAKDKSFGYKSSDIGEWCEEKTHGKYKSS
DMIYISSKELRELNIEAITEKLKKAEGFNKIIVNATDYVDVKVFTIAFIRAVNSGKEFMFRSAAAITKVL
GGVSDKEMLTKDELVSKGNTNGGIILVGSHVNKTTQQLEELKNCKYPIEFIEFNQHLVLQENGLKNEVKR
VIKVVEEKISSGKTVAVYTRRERFDLDTNDKDKQLMISVEISDAVTSIIGMLNVRPNFIIAKGGITSSDV
GTKALRVKKATVMGQIKPGIPVWMTGKESKFPNMPYIIFPGNVGEISTLRESVEILMG
>gi|260688046|ref|YP_003219180.1| putative gluconate permease [Clostridium difficile R20291]
MITGYGLLIAFVISIGILLVSIIKFKVNPFLALLITSIITGFMVRMPINEISTTISTGFGNTLGSIGIVI
GLGIIFGNILSESRATESIAKGLLAKTGEKNSALAVTTAGFLISIPVFMDAAFVIMMPIIKYVSRVTKKS
LMVFVCALGVGTIVGHALVIPTPGPLAVAANVNANVGSFILYSIIVAFPAVLIGGWIYGKRFEKYPAYAI
DENDREKNLEKGKDSIKIEDDDSSKVPGFGISMFSLLFPILLILISNVFSMFLEKGSTMSGVLAFIGDKN
IAILLGILVAIGFLKRYINKPMGDVVIEAADSAGLILLITGSGGAFGSVINASGIGNFLVDTMSGLSISV
VVLGFLLSALLRISQGSATVALVTTSSILGPTILATGMSPVLVGLAICAGGVGFSLPNDSGFWVLSRFSG
LSVKDTLNSWTIGGTIAGVVAFIMVLLLSVINGIIPLPGL
>gi|260688047|ref|YP_003219181.1| 2-hydroxy-3-oxopropionate reductase [Clostridium difficile R20291]
MEGYKMKLGFIGLGIMGKPMAKNLLKDGCNLLVYDINKSAVDELISCGAKYASVLEMGQECDIVFTILPN
GTIVQDILFGMDGLAKTLKEGSIVVDMSSVTPTESILCANKLKDMGLEFIDSPVSGGEPKAIDGTLAFMA
GGKEEIYKKVEPFFNIMGSSSILIGDNGSGSVTKLTNQVIVNLTIAAVSEAFVLAAKAGADPEKVYKAIR
GGLAGSTILDAKIPMIMNRDFKPGGKISINLKDIKNVMQTAHNLDVPLPMTSQLLEIMQTLKVHGHLEDD
HSGIAQYFEKLAGVEIKKHNN
>gi|260688048|ref|YP_003219182.1| GntR-family transcriptional regulator [Clostridium difficile R20291]
MATFKRLQEQAYDYLKELILSGEMIENEIYSETKLASEIGISRTPIRDALQRLSQDGFIDIIPSKGFRIH
QITANEIVEIFQIRSAIEGFCTFLITSQYKEARAVETISKLKHLLDKQKDILLGDKNLNSFAEYDTLFHT
TIVSYAQNTEFDKMFNNYMYRIKKLALDSLSHEGRLETTLKEHTDIFNNIANGCIEDVYKTTLIHMETPK
YINLEDFCNNK
>gi|260688049|ref|YP_003219183.1| hypothetical protein CDR20291_2704 [Clostridium difficile R20291]
MIFLNENVVTNETIDKDYAIEEVRMACKHFGDLYFYFSKVLFEEFGEDKTIEILRKVLFERSEERAIAMR
ERALENGDELIADNIISTTDVPFLGWVPEFKELHCPYGASWLLRFEENPWFKKFASLYCDVTDTTVAEVF
TGDTSHKITKNILWGDKSCERIYFHDDKVSEGKYTYGNKNCK
>gi|260688050|ref|YP_003219184.1| hypothetical protein CDR20291_2705 [Clostridium difficile R20291]
MFNKIYEKKEFIVFQVKKGYVVYNTRKSFEEGHTHLKHFEAAKTAIDLAINKKIPRSKDGYYLTSLIRIS
DDGYYIDKLSELLYVREQKGKKEKYCNSGYQM
>gi|260688051|ref|YP_003219185.1| ABC transporter, ATP-binding/permease protein [Clostridium difficile R20291]
MKKSKGFKKTIGRLLPFVKKYKFSFIIAIICIISAATMNALAPKTEGLIITQLTKDVISIAKGVPGASVN
FDYVTKILVILACIYFANAIFTYTSSFLLTNAIQNTMRDLRNEVENKIRRLPISYFDSNSFGDVLSRISN
DVDTISNALQQSFMQIVNSILVIILALSMMFTINIYMALIALFIIPISYFVSKFVVKKSQSRFSLQQNAL
GKLNGKVQEMYTGFNEIKLYGKEEDSIKEFKKVNQELCENGFKAQFISSMMNPMVSLVTYFGIAAVAVVG
SIYAVSGGITVGNLQAFVRYIWQINQPLSQMTQLSTVIQSSFAAIERVFEILDEEEEIPDVENPVKIENV
KGNVTFEHVNFGYGENSTLIEDLNAEVKSGQMVAIVGPTGAGKTTLINLLMRFYDVKKGAIKIDGVDIRD
MKRKDLRSMFGMVLQDTWLFNGTIFENIEYGRFGATKEEIIQAAKVANVHHFITTLPDGYNMFLNEEASN
ISLGEKQLLTIARAFISDPSILILDEATSSVDTRLELMLQKAMRNLMNGRTSFVIAHRLSTIRNADLILV
MNNGSIIEQGNHDELMEKGGFYEKLYNSQFADKESE
>gi|260688052|ref|YP_003219186.1| ABC transporter, ATP-binding/permease protein [Clostridium difficile R20291]
MITLSQKLRKEKNMKLILSYLKNYKLLIVLNILAIFSFALVELGIPTIIAKIIDNGIANQNIAYIKQMGI
VIVIISIIGVVGSILLGYCSAKVSTSVTRDIRNDIFEKSQEFSHTEYNKFGISSMITRTTNDAFQIQQFV
NILLRTALLTPVMFIISIIMTIRTSVELSIVLAISVPFIIIGVAIIAKVSQAISSKQQKGLDKLNLISRE
NLTGIRVIRAFGNDDYETERFEKTNTYYANVSKKLFKLMSITQPAFFLLLNIAVLAVFWISSEKINIGEL
QVGQLVAFLEYLFHAMFSIMLFSMVFIMYPRAEVSANRIKELLNEEPLIKNPENGIKDTENKGIIEFDNV
TFTYPDGEASVLKDISFTAKTGETVAFIGSTGSGKSTLINLIPRFYDVTEGSIKINGVDIREYDLKALRK
KIGFIPQKSLLFTGSIANNIRFGKHKAGESELEYSARVAQAYEFISKKPRKFDELISEGGANVSGGQKQR
LSIARAIIRRPEIYIFDDSFSALDFKTDAILRAKLKKETKDAIVLIVAQRISSIIDADKIIVLNEGQVVG
MGTHKELLKNCEIYYEIATSQLKKEELE
>gi|260688053|ref|YP_003219187.1| putative amino acid racemase [Clostridium difficile R20291]
MKISEVATPNFLLDLDQLEKNIDKIQQICTNNNKQLWPMLKTHKSTYIARLQKNAGASGFLVGTLDEGEA
LIKAGFEDIMLAYPYMGEVNINRIVTMASKINLICATDNIECAKAYSEAFSKSKIECKLLIIVDCGLHRF
GVEPEKVVELATEISKLENIKIVGISSHPGQVYGCSSPEGVPDVCVQEDSSMEKAYKALTDNGFNIEIVA
SGSTPTVEAEAASKTITAVRPGNYVYYDAIQIGLGCATEDMCALTVVCTVISKNSSGYYLIDCGSKCLGL
DKGAHGNSSIVGYGRVCGHPELTIDSLSEEVGKIKVNGETDIKIGDRIRIIPNHSCSTANLTSNLLGFRG
DTIEKVIEVDIRENSKQIIL
>gi|260688054|ref|YP_003219188.1| transposase [Clostridium difficile R20291]
MSRKYSISSMCKLIGVSRSGYYKWLSYSKKSSDRGIKDRIIKDYIIEIHKKYRGTYGRKRICTYLNKILD
SPINHKKVYRLMKELGIKSIIRKKVYRRKFKSYEVYDNILNREFRANQPLEKICMDITYIPIGKKFLYMN
VAKDLFNGEIVAYEISTKMDTKLVNKTVNQLINMNLAKDCILHTDQGSQYTSRSYSKRLKDNGIIQSMSR
RGNCWDNAPIESFFSHFKSELIYLIDTTDPKEMISLINDYIYFYNNERIQLKNGMSPIEYRTHSA
>gi|260688055|ref|YP_003219189.1| hypothetical protein CDR20291_2710 [Clostridium difficile R20291]
MSQQNTGNAIVNSKPKKTAVEIFMGGAKKGFYIGVEQILPAMIMGYVIVQFLQLTGLVDILGNIFGPVMG
IFGLPGESVVVLIAAFFAKAAGAATAANLFAQGLITAPQATILIMPCMLMGTLVGHYARIVLVANASTKY
RMLLLAVPIFDAIVGMLIVRVLLTVMGLM
>gi|260688056|ref|YP_003219190.1| hypothetical protein CDR20291_2711 [Clostridium difficile R20291]
MDVTAGDNKVTWKGYLSLFVLIVLFSGVFKDSQGFLKALDFANLTGSFGTIADGVDFMGKGGTGAKDGFL
FALTLIPTVCFAVGLIDVVESMGGMKAASKIFNPLLRPLLGIPGIAGIAFVSSFTSSDVASIMTKELFES
GEITDDERTIFVAYQYAGSAVILNTINTQAPLLPIALLALGPIILIEIFCKILGANLVRLIIGVRNKKNK
AKEAV
>gi|260688057|ref|YP_003219191.1| putative peptidase [Clostridium difficile R20291]
MNTYLNEISKFVDENREEIVSLWKEIVNIESYTHCKESVNKLAERLKLEFEKEGLDCELVDVGENGNTLI
GTLGSNIDKKPIIFSGHMDTVFETGTFGENPFKIIEGKAYGPGVLDMKGGIIISLYVIKALNKIGYKERP
IKIVFSGDEEIGHKDSTGADVILREAKGALCAFNMETGLVDNSLCIGRKGRIGCNIHVKGVETHAGNDFE
GGRNAIEEMANKILRIQKLTNLDVGTTVSVSVIKGGRVENSIPEDCSIKVDLRFEKVEEMENVKEQVREI
CKETYIEGTSTEVNFISEMMPFETTEDVMRFHTFVNEVSRENGFGELNAKRLGGSSDASYLTIANVPTIC
SFGVRGEWNHTSREYAVVDSMFERVKLISTVILNLDKFEV
>gi|260688058|ref|YP_003219192.1| hypothetical protein CDR20291_2713 [Clostridium difficile R20291]
MKYKIGFLTTSYFMSDKFKQALKELNDTCEITFIELKGENPFNNLPNIYYEQVDNFDGFVCSGIVPYSEL
IINIKDIKVPLNFLKLDERDFYKYLFKLLNSQKDIDFTKSFMDFLREDNNYYDIYSLIDSNKCPYTIKDF
NIPQPVYDFKKLNDKLLEIHLDLLRDNKINLSFTRNYIISCELNKLGYDCIYMVPSTESILNTFKSLVNE
ITLQNLDKNKSATCIVTVNSSEYINEDLIFKNDEIQNQIYNTILNSLSRHGFYGVQVKKNDMKIEIHTTK
EILNNMTNNYTDFFISEDLKEIKYSLNIGWGIGNTNIHAEQNARQANGKSASLNGNCTFIVNDTNDTIGP
LYSNKNSNNIEDSSIANKVASFIPLSNTNVSKIMCMINDRNSNNVSAEILADYMNITLRSANRILSILYK
AGIATIVNTKLDNQRGRPKKIYKVDFLSFLNKMQKLNS
>gi|260688059|ref|YP_003219193.1| hypothetical protein CDR20291_2714 [Clostridium difficile R20291]
MTIKEVEEKTGLTRSNIRFYENENLIKPLRNERNGYREYSDENVEDIKKIAYLRTLGITIDDIRNIILQK
VSLVEVVEKQEKVLETKISDLENAKTMCNKMLESDELSYLNLKVEQYITELPEYWNKNKPVFKLDSVSFL
YIWGGKITWGIITIACLLIAITVFPKLPPQIPIQWNNGVANYVDKKFIYAYPVICVVFRILLRPFIWRWL
QIHAFYSDTIADYLTNFMCFVALSIEIFSILFIYNIARHVTIIIFIDILVFIVLLIIGVYKLFKKYN
>gi|260688060|ref|YP_003219194.1| putative flavodoxin [Clostridium difficile R20291]
MKSLVLYSSLTGNTKKIAYAIYDEIQEEKDIKDVNELVDVQYGIDYENYDIVFLGYWVDKGICDKNSKQV
LENIHNKKIALFGTMGASKKGSYGASIIEKIESIIPKDNEILGSFICQGKIAEGLKAKYKEMLKLSPDNE
HIRQQLNNHEESQSHPDEQEIYEASMFAKNMMIKASIV
>gi|260688061|ref|YP_003219195.1| transposase-like protein B [Clostridium difficile R20291]
MIEVKKAYKFRMYPNKKQQELINKTFGCCRFVYNKYLAKRIEVYKNDKETFTYKQCSSDLTNLKKELKWL
KEPDKFSLQNALKDLDNAYKKFFKEKAGFPKFKSKKINRFSYKTNFTNGNIVYCGQHIKLPKLGMVKVRD
KQVPKGRILNATISKEPSGRYYVSLCCTDVDIEAFENTNNQIGLDLGIKEFCISSCGEFIENPKYLKKSL
NKLAKLQRELSRKTIGSLNRNKARLKVARLQEHIANQRNDFLQKLSTKLIKENDIICIEDLQVKNMIRNR
KLSRLISDVSWSEFIRQLEYKANWYGRQIVKVGKFFASSQICNKCGYKNEEVKDLNIREWICPSCNETHD
RDINASINILKEGLRLITIQNK
>gi|260688062|ref|YP_003219196.1| putative oxidoreductase (FAD-binding domain) [Clostridium difficile R20291]
MYCNLLKPIKIGNLELKNRVSFAPTSMGLKLEEKIKKFSDIAKSGVALITLGDVSIRPSFHKVAISLSDE
DGVIKYKKIVDEIHNSGAKVSAQLFCSDYDVNLIKDTMKMGITSHDEIKKIMNDGVKDYITNMPKEEIKN
IINLFKVTALNAKKAGFDMIQIHGDRLVGSFSSSIFNNRNDEYGGTCDNRSRFASEIISSIRDEVKDIPI
DYKFAIRQENPHYGNAGVLLSEVEYFVKKFESLGVNSFHVTLANHSKLEDTIPTNNHPYFKDEGCFLYLA
DEVKKHTNLPVCGVGKLSSPDFIESIISNNRVDMVSMSRQLLADSNWLQKVKDGRVDEIKKCCYCNKKCA
DALQTRSQFGCILD
>gi|260688063|ref|YP_003219197.1| putative MarR-family regulatory protein [Clostridium difficile R20291]
MDFKNLQYESLSYIICNLQKNFKLYCEKCLKPYKLTNGLYFYLIYINKNRNCSLNDVSTEFEVDKAHTTR
TISRLEQDGYIEKIQNPNDSRAFQLRVTDKGEEVLGDIKNIFSKWDNHIKKEFSDTEYKELVKNLHVVKD
IKTAVEEG
>gi|260688064|ref|YP_003219198.1| putative aromatic amino acid aminotransferase [Clostridium difficile R20291]
MISNKMQTLVANSSVIRAMFEEGKKLSDIYGEENVFDFSIGNPSVEPPETIKAVINDILNEESPNLVHGY
MNNSGYEDVRDAIAEHINKKDGLNLTRENLIMTCGAAGGLNIILKTLLNPGDEVIAFAPYFGEYKNYTEN
YDGKLIEVPTNIETFEPDLDALKNAITPKTRALIINTPNNPTGVIYSEELLKNLGELLDSKQKEFNTSIY
LISDEPYREIIYDGAKVPCVLKYYRNSFIGYSYSKSLSLPGERIGYIVANGQMDDFDDVMSSLNVANRIL
GFVNAPSLFQRVIARSLDAEVDVNIYKKNFDLLYNSLIDMGYSCVKPNGTFYLFPKAPIEDDKKFCNDAK
QFNLLLVPGSSFGCPGHFRVSYCVSYDKVKSSLPAFEKLAKLYNLK
>gi|260688065|ref|YP_003219199.1| hypothetical protein CDR20291_2720 [Clostridium difficile R20291]
MNILIYSTNINYKEVFDLKKGYVYIILTTLFFSSMEISLKTVTNDFNPLQITLSRFFVGGLVLLPFAVKR
LRALSLSITKSDLKYFAFLGFMCVVVSMSLYQLAVLNTKASVVAVLFSCNPVFVMLLAYLILKEKIYRHN
VISLILEVLGIIVIINPLHTKLTLSGIFLTLSSAIIFSMYTVFGKRKTLKFGGIVVTCFSFIFGSLEMLI
LVLLTKINFIADILNKNKLHIFANIPIFSGYTLHNMPIMIYVFVFVTGVGYALYFMAMEATSTSLTSLVF
FFKPVLSPILALLILKEIIPINMVIGILLIVIGSIISIIPTIITQMHNKHVEALYKE
>gi|260688066|ref|YP_003219200.1| hypothetical protein CDR20291_2721 [Clostridium difficile R20291]
MRPSKKLLIAIISIFLISSVPVSAHAYSTTIQQNKDTLSQIVVFPTGNYNKNEANAMVNRLANIDGKYLN
VLKQDNLKIKLLSGKLTDEKEYAYLKGVVPKGWEGTGKTWDDVPGLGGSTVALRIGFSNKGKGHDAINLE
LHETAHAIDHIVLNDISKSAQFKQIFAKEGRSLGNVNYLGVYPEEFFAEAFAYYYLNQDTNSKLKSACPQ
TYSFLQNLAK
>gi|260688067|ref|YP_003219201.1| putative collagen-binding protein [Clostridium difficile R20291]
MKKGNKKALLISLIMILSMVVSTIYPTVSYASELGENSQIQSGSTNSSTGEEKESDNKKPEQTPEKDKAT
DNKKPEQTPEEDNSTDNKKPEQTSEEDKSTDNKKPEQTPEGEKPIDNKKPEQTPEGEKSIDNKKPEQIPE
EDKSTDNKKSEQALEDEKPLDNKNTEKTPEEDNLLEDENLLKVLEEELNEDYGFVVKINNNTIETESMKK
ISFNLTYTPTSKGIQAGDSITFKVPDVFNKVNLDYTSECFDKTESNGEYTLTFRELPNGQSVMQGKIGLE
AYVKKVDEDTNAKIHIETTGKIESGSGDIDVEIKPGDKTDVPDAKGTLKKLVEGRKSTTVFMPVKNKDIN
YSIQVNEKQEELKDIILYDELPEGLTLINGSVSVVTSDGKEVSDFNIEQSKNSISVNFGNIDKSYTVKYK
ARISDKNAKHGNKYKNVARIESDGKKIQEDDATVSIFDRGDNYLLTKGHSGATNITQVGQVINYQISIND
DKSPISNVVITDNIPEGMRLTTSGEDGHDFRVVEVPMNGSWTPWSKEKIANNISYKVEEKRNESGQVDKV
ITGFTINLSKEEVESKFFIAYTLKVISIEDSYINRAVLDANNSEIDKNDEINFKKNSGLISAKKEVDKKV
LNSSDNQIVKYKINMSTYGVYDAGQVNLLDEVNPSLKISNIKYSDNLELKKEAGDGKNTIRLVNKYEFKQ
IKEGEPVQSWVTFDADFTNVKVGETIQNVAQINGSSPPGVETTKQGYAFEAKKVDALDKNVLSGAKFNLE
DAFGNIVVKDLVSDEDGVIQSSVKKPGIYYLVEVMAPSGYEKLKDKIKVEIGNKDIGRIVDIGNIENIRQ
ENPPVNPPVPPNTDEPIVNPPVPPSTDKPRKPSNPSDTEDTIVINPPVPPSEDIINPPIPEILNPPVPPS
EEVIETPVKQIVPIPEVVKPSVSEEKNNKAKDDTLVNPPVPPKTGDSTTIIGEILLVIGAIVGLVVLRRN
KNTN
>gi|260688068|ref|YP_003219202.1| putative cation efflux protein [Clostridium difficile R20291]
MFSKILVKTFIRDSENVQNTDVRNKYGYVAGVVGILSNLLLFVIKVFIGMFTSSIAIMADAFNNLSDMAS
SAITMIGFKLASKPADKEHPFGHGRIEYLSALIVAFMVMLVGLQFVKSSIERIVNPIPVKFEVIPLILLI
VSIMIKIWLSRFNKFVGNKIDSSALKAVSLDALGDVFTSSCVVISFIVARFTNFPIDGYVGIVVSLVILY
AGFSLVKDTINPLLGEAPDEEMVNSIIELLLSYKYIIGTHDLIIHNYGVGRCIASIHAEIPSNIDIMEIH
EIIDTAEREISEKLDIYLVIHMDPICLEDKEVMSAKKELEEILKKNSLVKSMHDFRIVGKGSKKNLIFDI
VVNPSEFSKDMSEDDLKEDITKLVKEINPEYNCVIVVDKDFI
>gi|260688069|ref|YP_003219203.1| putative transport-related ATPase [Clostridium difficile R20291]
MRYYNKPTKEVLKYLKTNPEIGLDDNEVEERKLRYGLNEFTIKEGRTFWDELGESLTEPMILILIGAAVI
SSFVGELHDALGILGAIFIGISIGIITEGKSKKAAQALSKLTENIEVKVLRNGKIIKISKNDLVPGDIVY
IETGDMIPADGRLIQSINLKLREDMLTGESDDVAKNADAVLDMEVVYSKTEIIEQDAIPAKQVNMVFGGT
LVAYGRGIMVVTHTGDKTEMGKIAQNLSNEDQQTPLQIKLGKLGAKIAGISGVIATLLCMFMIIQMQRKG
MLILDTSSILSFLQSLEPAKNAYMVCIALIVATVPEGLPTMINITLAITMQKMAKINALVTKKEACETIG
SVSVICSDKTGTLTQNKMMVEVAYVDGKYISGGEYQSNSYFEQNCIVNSTADIEKEDNSFKYIGSATECA
LLLYHNDKNYNEMRKQTYLISQIPFSSEEKKMSTLIRQEDSDILLSKGAPEVLLKKCSYVQQGKNIVPIT
PKVEKSILDEIKKLQIKSMRTLGFAYKKMSNSKTEVAMTSEGELNLIGNSRSYMKEDNLVFSGFVGIVDP
LREGVKDSIDKAFNAGVDVKMLTGDNINTATAIGNELGLLNDGKKAVEATYIDVLTDKELREEIKGISIV
ARSKPDTKMRIVSALQKSGEVVAVTGDGINDAPALSQADVGIAMGISGTEVSKNAADIILTDDSFSTIVE
GIKWGRGIYENFQRFIQFQLTVNIVAFIIAIISQLTGKDMPFTTIQLLWVNIIMDGPPALALGLEPVRDY
VLKRKPINRHSGIIARSMFVNIIINAILIITIVFTQSAFNILGATSEEQGTVIFSLFAFSALFNALNCRE
FGLNSTIPNFFKNKLALQIIVVTGIIQIIFTQVFQSFFNSVSLDFDMWIKIILFASTILLSNEFVKLILR
TMKNSRSMNSNSKN
>gi|260688070|ref|YP_003219204.1| serine hydroxymethyltransferase [Clostridium difficile R20291]
MLKTTKISDPELYKIVADELVRQEHNIEMIASESTAPTEVLELSGCVFTNKTEEGYPGARFQAGSEEADK
LETLAIKRAKEVFGAEHVNVQPYSGSTANYCVYSSILKPNDTVLSMRLDQGGHLTHGSAVNFLHDIYKYE
FYGVDPNTGRIDYDALEAKAKECRPKLIIAGASSYPRLIDYERISKVAKEVGAYFMVDMAHVAGLVAAKV
IPSPVPYADFVSSSTTKTFCGPRSGIVLCKAEHAKKLDKGVFPGTLGSIHLNTVAAKAFSLLYLSTDKFK
KIMEQVVVNAQTLASELISHGFSIVSGGTDNHIVMVDLRSKNLTGKQFEKALEYVGITVNKNVIPDDPQS
PFVTSGVRIGLTSISQRGLKEKEVIQIAGIMNKVAENIDNKEVLDECKAEAQELISKFPLYPEGYFED
>gi|260688071|ref|YP_003219205.1| putative aminobenzoyl-glutamate transport protein [Clostridium difficile R20291]
MRALNVVERAGNKLPDPVTIFLLLCIIVVILSAVISNLGVEEIHPSTKEVVKVVNLLEKEQIQSYLGSIV
TNFQSFAPLGLVLVTMLGAGVAEKSGFMEVLMKKGISKVPQKLVTVAIVFAGMLSHTAADVGFIILPPLA
ALVFLGIGRHPLVGMFAAFAGVAGGFAANVMLSTTDVLLAGFTIPAAQMMDPSYQGNPAMNLYFAFISAI
VLTFAGAFVTEKFIAPRFTKYNDSTNDKDIQELSELENKGIKYALLSLLVVVVVIVALCIGDNAFMKDPE
TGSILSSNAPLMKGIVPIITIIFLTPGLVYGKVSKKIKSDKDLVSMMGSSMSDMGGYIVLAFIASQFINL
FNLSNLGTILSITGAKLLAESGIPSYGLIIGFILLSGFINLFVGSASAKWAILAPIFVPMFMLLDFNPAL
TQIAYRIGDASTNPISPLFPYFPVILAFARRYDKDIGIGTVISNMIPYSVVFTLIEIIILLLFMGIGIPL
GPGGGISYVL
>gi|260688072|ref|YP_003219206.1| putative peptidase [Clostridium difficile R20291]
MHELILISEKYKEDILDFFTDIHMHPELSFKEFRTTKAIKDLLVSLDIEILDLGMETGVVGLLKGKYDGP
TVALRGDIDALPIYEEVDIEYKSRYDGIMHACGHDIHTSCLVGCAYVLSHIRDSLHGNVKFIFQPAEEVN
KGAKMLVERGVMENPKVDAIFGLHNHPDIPCGKIGVKLGGLMAAVDTIKIEVNGFGGHGGIPNRTIDPIV
ASSAIIMGIQTIVSRNISPLESAVISIGTINGGTANNVISEKVDMTGTCRSFSNEVRKKISENLENIVCE
IARGYQATAKLDYLFDLPAVINSKEMYTIACKSVCDLYSEDAIVDPIPSTGGEDFSIFMEKAPGFFYWLG
VGNKEQDCIYQWHNPKFKADKNSILVGTNVLCQSVINYMDKLKNKI
>gi|260688073|ref|YP_003219207.1| hypothetical protein CDR20291_2728 [Clostridium difficile R20291]
MSDKVNMKNIICIAGAYLATAIGSGFATGQEILQFFASQGYMGLIGALISMVLFSFLGAEVITRGRELKL
KEPTRIYTFYCGKILGKFYEWFSPIFLFGILIVMISGAGSTLTEYYGINPYLGRVLMAVATLITVSMGLE
KLVSILGRIGPVIAVFTIAVGLISLFKHFDGLSMVGEAMKNIEVTKASESPIVSGVIYNTLNIIVMIVFL
TGMGASIESKKDAFWGGLLGGIVFMTAGIVMYLAMISDIGNLYMKEIPSLYLADNISPIVGVCFSVALIL
GIYTTAVPLLWSVTNRIVEDEHPKFKLVTTVIAILACIGGFLPFGKLVNILYPYTGYMGLLILVCMVYKA
ITCRKKSTQSQE
>gi|260688074|ref|YP_003219208.1| putative two-component response regulator [Clostridium difficile R20291]
MRRALIIDDEEAVLKIITHFIEMKDMPIKIVGKATSGDEAVDKIIGLEPDIVFIDIQMPIYNGLEVIEKT
SHLSKKINFVVITAFNYFEYAQKALRLNVKDILLKPLDMKEFTKSVEKIIGYQYTNNDLLNEILEYINLN
YSNDLKLNDCARLFLTNPSNISRIFKSNLNTTFISYLNHIRIEKSIELLENTTKSINEIAEIVGYNSLNN
FYKNFKIEKGMTPKVYKLNTKN
>gi|260688075|ref|YP_003219209.1| putative two-component sensor histidine kinase [Clostridium difficile R20291]
MKIQNTEWGYIEWKHTYDENNPKQAMNIYIAVTMPGKKHFNHVHYGQEQMIYILEGEGLYIINGVWKPFY
QGMIFYIESGSTHETINTGDREIKELIVSNNVDDVGESEVIDINPNNYLKKTLINYSESTLNLYAAVESI
RGQFIDPFKIPLIIYDDSWNIVLKNPYFPLFCFEKCNPMKFPQNCDCMNQKSSNQFVCEYGITIYNIPIL
YKSNSIGVIRGGYVLLSDLNLDTEHNNLYDIPEGAARSIKRLLKQISKNIINFCSFNDIRKDLQEKEKTI
ARTYHYGEQLEMNLKVAQDMVTNLRINHHFLFNTLNSMASIALDDGSYDLYSAIIDLSRMFRYTMRSDLR
FVELESEILYIKNYLNLQKLRYGDALKVKYLIPEKLYNLSVPFNFIQPIVENAFTHGFRDIDTEKRIEII
ARLDSQYAIIEIHNNGTILDGNNIDKIKAGIRSNNGHGLSLIYTKFTSAYGNNFDMDIKSSDNEGTYIMI
KIPIENYKEYV
>gi|260688076|ref|YP_003219210.1| seryl-tRNA synthetase [Clostridium difficile R20291]
MLDIKRIRENLDCIKKAMERRGEKDFNLDEVVKLDDERRKILQEVEVMKHKLNTASKNIPNLIKEGKDVE
NEKIKLKELSDKIKVIDQNLKEVEDKMEYLLMRIPNVPHPEVPQGETDEDNVEVRTWGKTTTFDFESKAH
WEIGTELGILDFETASKITGSRFTLYKGLGARLERALLNFYLDTNTKVNGYTEVIPPFMANRNSFLGTGQ
LPKFEEDMFKIEGLDYFMIPTSEVPLTNIHANEILKFEQLPINYTAYTPCFRSEAGSAGRDTRGLVRQHQ
FNKVEMVKIVAPEESYNELEKLTNNAETMLQLLNLPYRVVKICTGDLGFTASFKYDVEVWMPSYNRYVEI
SSCSNCEDFQARRAGIRFKRDKDSKAEYVHTLNGSGLAIGRSVAAILENYQQEDGSVVVPEVLRPYMGVS
VIK
>gi|260688077|ref|YP_003219211.1| putative amidohydrolase [Clostridium difficile R20291]
MKEKIYYNGNIITMEDSICGDAILIKDKIIKKIGTKEEVFALKNKDTEIIDLQGKTLMPSFIDSHSHLIA
FATTLKLVPLEDATSFKDIVKKIQDFKESNNIKKGDWIIGFSYDNNFLEENKHPDKSVLDSASSENPILI
SHASGHMGAANTLGLKQLGVTNETRDPEGGHIGRVEGSEEPNGYLEENAFFNVASKIKQPSSNEIFNSIE
KAQNIYLSYGITTAQEGLMEENQFNILKAMANQNKLKMDVVGYVNLKKSKSVLDNNREFIKKYINRFKVG
GYKIFLDGSPQGKTAWLSRPYENSDDGYCGYPIYKDEEVEKFIDISLKEKMQLLTHCNGDAAADQLIDAF
EKVLNLKEQSSENNIRPVMIHAQTVRADQIDDMKVINMIPSYFVAHTYYWGDIHIKNLGEDRAFKISPLK
TTIEKGLIYTLHQDTPVIAPNMLETVWCAVNRITKKGIQIGENEKISPLDALKGVTINAAYQYFEEDKKG
SIKEGKLANLIILDENPLTIDPMKIKDIKVLQTIREGEVLYSLK
>gi|260688078|ref|YP_003219212.1| nitrilase (carbon-nitrogen hydrolase) [Clostridium difficile R20291]
MSKENKNVRIAVVQASPVIMDLEKTVEKALGLIKEAGRKGANIVVFPEAFIPAYPRGLSFGFVVGSRTME
GREDWKRYYDNSVPVPSATTDLLGKAAQEAGVYLSMGITERDGNDINCTLYCTNLFFSPEGKLIGKHRKL
KPTGTERCIWGEGDGSTLTVVDTPYGKMGSLICWENYMPLARTVLYAKGVKLYIAPTADSREEWQATMKH
IALEGRCFVIGCNQYVEKNMYPTDLNYYKELDAEPEIMCPGGSCIVDPFGKYVAGPIFNKEEMLIADLDL
EKIVLSRLDFDSEGHYSRPDVFELIVHE
>gi|260688079|ref|YP_003219213.1| putative zinc-binding dehydrogenase [Clostridium difficile R20291]
MNKKFKSLYITEEEGNFRRNIVEREVDTLPEGEVLIKVKYSSLNYKDALSANGNKGVTRKYPHTPGIDAS
GIVESSSCDDFKIGEEVLVTGYDLGMNTSGGFSEYIRVPSSWVVKLPKNLSLKEAMDYGTAGFTAALSVY
KFIDSVDKNMGDVLVTGGTGGVAVIATKILIKLGYSVVVSTGKLEEQKEVLLNLGVKDVIHRSEVDDNSG
RPLLRPRWAGVIDTVGGNTLATAIKTTNYCGAVTTCGNAGGVDFTSSVYPFILKGITLYGIDSVDCPMNL
RLKIWDLLSNEWKLDDLDDMVNVVSLEELNDSIDSIMTGKHVGRTVVDLEKI
>gi|260688080|ref|YP_003219214.1| MarR-family transcriptional regulator [Clostridium difficile R20291]
MEDKYIVHFISKTKASMIKFIENKLSKNGLGELIPTHGNILTALYENNGILTMKEIAAKIGKDKSTVTVL
VNKLINLGYLERQKCTNDKRITYIKLTKKALLIEDTFNSISTQVKETAYHNITENEKQEFLRILKKINDN
FKNAD
>gi|260688081|ref|YP_003219215.1| rubrerythrin [Clostridium difficile R20291]
MNLKDSKTKENLLRAFAGESQARNRYNISASVAKKEGLYIIESLFNYTADQEKSHAKQFFSKLKEFAGEN
ISISGAYPVDLYDKTAQHLKAAQHNELQEWDDVYKNFGKTAREEGFESIAKLFENIAEIEKVHGDRFGRY
ATDLEEGTLFRRNEDIQWICTHCGHIHIGKEAPKACPVCLHPQGYFLDFKNSLFE
>gi|260688082|ref|YP_003219216.1| hypothetical protein CDR20291_2737 [Clostridium difficile R20291]
MEELISKKDLLSKTNISYGQLYRWKRKNIIPEEWFIKKSAFTGQETFFPRDKILERIELILSMKEETSLD
DIANMFMKKDINKEFDIDFILSKEVICNYTKEIFQNLYKKEQSIGKKELLILSIIEKFLVKSIITFEELK
LIVNIIEENFTSIYNESGKIYLFRKFGVPFVVGCLDYKKVKFEKDVVKIIEIDLTKEINDISIKLS
>gi|260688083|ref|YP_003219217.1| hypothetical protein CDR20291_2738 [Clostridium difficile R20291]
MEKGSIKILGEGFISSGEYENIKIVGSSKSKGNVKSNEVKVLGDAKFEGDINIKNFVVNGKTIIRGNLKA
ERVRVNGQLNIEGDAEIDDLVITAQQKVDGKLKCNNVTIRGQLSVNENMYAQDIKIYGEMRNKSNIECED
IKVYGVIKCDGLLNGENIYVYSGGGSYCKEIGATNIKIGRSKDAFSLIKIINIFSGKFKCNLIEGDTIEL
EDASIKDIRGKSISLVDNCDVGNIEYSDNLSVSDNSTVKNSIKVG
>gi|260688084|ref|YP_003219218.1| hypothetical protein CDR20291_2739 [Clostridium difficile R20291]
MNEELSSLRFDGVGKCKGGIFDNVNISGTGKIEGSVKCSKFDSSGSAKVFGTTECNEFFTSGLSKVEGNI
LASKVEISGLLRCTGNINSVEIDTSGIINVEGSIKSDIIHGEGYLKANENIDCENINLSGILECNGFLNC
EEVNISLNGTSNFNEVGASSINIKKGHGDYCKKFRMLEKKHINFEKVSSNLISLGLLSIRKYTESKLFAN
IIEADEISLENSEVKVVRGKNIKIGKGCYVESLEYSESIEIDEDSIVGEIKNISEKIKLKKDK
>gi|260688085|ref|YP_003219219.1| putative bifunctional protein [includes phosphonoacetaldehyde phosphonohydrolase; 2-aminoethylphosphonate:pyruvate aminotransferase] [Clostridium difficile R20291]
MEAINMKKIYGEKIKAVVFDWAGTTVDYGCFAPLNVFIEIFKRRGIDVTMEEARKPMGKLKIDHIREMCE
MDRIKNLWSDKFGKVPTEDDVNELYAEFEPMLFETLEEYTTPIPHVVETIEKLRKNGLKIGSTTGYTREM
MNIVEPNAAKKGYSPDFLVTPSEVSQGRPYPWMCYKNAEALGVSPMSSMVKVGDTISDVKEGVNAGMWSV
AVIKGSSELGLTQEEVENMDKEELKAKMSIVSKKFKEAGAHFVIETMAELEDILIKIENETIKSDFVPEN
DYILLTPGPLSTTKSVRASMLKDWCTWDVEYNNLVQDVRRRLVSLATQNTDKYTSVLMQGSGTFSVEAII
GSTISKDGKLLVIANGAYGKRMKDICNYLNIEFVDCTFKDIEAVDLNVVENLLKENKDITHISMVHCETT
TGRLNPIQEVGKLAKEYNKIYIVDAMSSFGGIEIDVEDFNIDFLVSSSNKCIQGVPGFGFIIANKEKLSK
CKGIAKSLSLDVYAQWETMEKNNGKWRFTSPTHVVRAFYQALLELEEEGSVEKRYARYKENQFTIASRLK
SLGFDTLVNDNAQSPVITTFLYPKNAKFEFMEFYTYLKDNGFVIYPGKLTDIDTFRIGSIGEVYPTDMER
LADVIEKFINR
>gi|260688086|ref|YP_003219220.1| DeoR-family transcriptional regulator [Clostridium difficile R20291]
MSLNSIDRKKEILKLLDSKGKVNTKELVKRLEVSSETIRRYLEELENENKLKKVYGGAIKINYGVIEPEH
IKRNNTNLDKKQSIAKYAAKFVNDNESIIIDEGTTNLQIVDYIISVNNLKIITNSYPVLSKLISYENQGL
FDGEVIFIGGKVNLKHQRTACPMSIDTMKNLYVDKAFISSEGILDSFGISSIDQNKALLSKEYIKNSKES
FVLCDSSKIGIASMYKIADLEELDFVICDVEPPNEWKDKLNEINITWIEAK
>gi|260688087|ref|YP_003219221.1| D-alanine--poly(phosphoribitol) ligase subunit 2 (D-alanyl carrier protein) [Clostridium difficile R20291]
MQETVIEIFEDVLGTDEIREDLDLNLFETELLDSLAIIEVLLEIENRLGIELQPTDLERKDMSTVNNLVK
FLETRK
>gi|260688088|ref|YP_003219222.1| D-alanyl transferase [Clostridium difficile R20291]
MIFSQYGDYFYLYILLLTSIPAVILGLMGKNIKYYGMLASLFMIFLIVGIDVQLKYLVIFIILEVIIVKG
YEYVRRKTKNKYIYWGFLFASMLPIIINKISPVTSFGIIGFIGISYLNFRTIQMVIEIYDGAIKEVKISK
MLYFMLFFPTLSSGPIDRSRRFEQDLEKHISRKEYIEEYLLPGIKNIVMGVGYKFVIAFLINTYWVSRIP
KDMSFINILSYMYAYSLYLFFDFAGYSLFAIGTGYIFGIQVPINFDKPFISKDMKEFWTRWHISLSRWFG
DYIFSRFVMSSMRKKRFKKRTTAAHVAQMITMITMGFWHGLTWYYVAYGVYQGLALVLTDIYQRKSKFYK
KHKKDKWFERVQIFITFHIVCFGLLIFSGYLA
>gi|260688089|ref|YP_003219223.1| D-alanine--poly(phosphoribitol) ligase subunit 1 (D-alanine-activating enzyme) [Clostridium difficile R20291]
MKIIEGIKKYSNTDRTALMCNGDKLSYKDLNEYSDAISVFLKDVYKEEDTPIVIYGNKENMIMACMIGAL
KSGRAYVPLDISFPIDRVFEVTKEIKPKVIFNFSDERNFGDINVIDMDKLNDIINEYQGKSLDKENWVKD
DENAYILFTSGSTGKPKGVQISSNNLDSFSDWISPYLNIDGSEKVIMNQPAYSFDLSVTTIYPGLIHGAT
LFSISKDVLADYKELFRQFSISDIAVWVSTPSFAGVCITEKEFNSKMLPNLESMIFIGEALSKNLTKELM
SRFPNTRIINGYGPTEATVGVSVNDMTQKAIDDEKSLPVGYPMSNCKIKILDEDGNELKENEKGEIIIIG
PSVSKGYFNNKEKTDEVFFYDEIDGVKWRAYKTGDMGYLLDGNIYYCGRKDFQIKLNGFRIEIEDIENNL
RKVHNVKNAVVLPVYKDEKIAYLKGIVELNEKNDLSNIKNGMIIKKELGKYIPSYMIPRNISIISEFPTN
INGKIDRKKLMEEI
>gi|260688090|ref|YP_003219224.1| putative D-alanine transferase [Clostridium difficile R20291]
MRKLIYFITPFIIGVVFLFGLDKFLDSKTDELLREKNLLPIMDDTLSDIKDKGVTANNHFLREKDIMILG
SSELSNSTKQHPKYYFNTNRSKNKVFAIGRAYTQTLQDAAILGSMNPNIDNKKVVLLISMQWFMEKDGVT
SHHYQSRFSPIQFYRFLDNPKISKQNKIEYAKKSSKLLWGSDEYKAEALYAKLYEPKTFPEKAEKVLLEP
YFQGRKYCIALKEKGILYKRLIKLDKKRATKRKRPINWSYERKKAIEDAKKRVGKNPLNIDKYYYKEHFK
DGIEQYKGRDKDVNLLTSKEFENYKLMLNVCTDLGINPVVVLIPSMDKFYNLTGISEKERNQYYDKAQKI
AESKGFEVLNLKDKGSDKYYLRDVMHLGTKGWVDVCERLFKIFKEQ
>gi|260688091|ref|YP_003219225.1| putative oxidoreductase [Clostridium difficile R20291]
MMGKIRFGIVGTSNIANIFLRAASRVKDFELVAVYSRNLEKAREFGTLHGASIFFDDLEQMAKSKDIDAV
YIASPNALHSKQAITCLKHKKHVLCEKSLASNLKEVKSMIKTAKDNNVLLMEAMRITCVPNFKAVKENLY
KIGKIRRFFGSYCQYSSRYDKYKNGIIENAFKKELSNGALMDIGVYCIHPMVNLFGAPKTVKAVSHILQT
GVDGEGSAVFQYDDMDAIIQYSKVADSYIPSEIQGEEGSIIIEKLNLFEKAIIKYRDGREEDISIPKEKA
EEKPREIEGMYYELVEFISLINNNKIESNINSHENSIIVMEIMDEIRRQSSIVYPADSI
>gi|260688092|ref|YP_003219226.1| hypothetical protein CDR20291_2747 [Clostridium difficile R20291]
MNMRKNKYKQLGGIFMDNVGSLLYFLFNFFLYGFIGWIIENLYSYYKQGHFQEDGFLNGPFKPMYAIAMS
IIIEVSRFIDPNNIFALLLLCLVVPTVVEYITGILMKVYFNKVYWDYSDYKYNSRGIVCLKFSVYWTILT
FIGVRYFQVYIVDSLYSLIIPYWPILVTILLVTLFVDEILTIKFLRGNKDIVER
>gi|260688093|ref|YP_003219227.1| putative hydrolase [Clostridium difficile R20291]
MQKVEGIIFDMDGVLFDSERISLEFWMETFEKYGYTMTKEIYTSVMGRNRKGIIEGLTDIYDSSVPIIDL
YDEKTKNMIEFMERKGAPIKLGVNELISFLKENGYKMAVATSTKRERAVKRLAKANLKDYFDAIVCGDDV
VNSKPNPEIFLKAAKKINVNPQNCIVIEDSPMGVEAAYNGGIRCINVPDLKEPDEQIKSQSHKILENLLE
VREYLKSLNSKECHNL
>gi|260688094|ref|YP_003219228.1| putative transporter [Clostridium difficile R20291]
MRELLKVTLIVMLVLINAFFVACEFAMVKLRSSRIDTMITEGNNNAKRCKIIKDNLNSYLSACQLGITLC
SLALGWMGESTVKELILPIVSVFNLSESIIYTISISISFLIITMMEVVIGELVPKALALYNTEKIMLSTS
FLLVGFYKLTYPIIYFFNLSTDLFLKPFGYSQADEVDEPHTGDEIRLLVEESYKSGLIDESEQRLVDNIF
EFEEKKIREIMVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCRKNKDDILGFVHIRDLYNQKINENKI
ELEEILRDIIYISENLTIDKALERIRKEKLQLAIVVDEYGGTSGVVTIEDILEEIVGEIQDEFDKEETHI
KKIGAGSYLVDGTESINYINKYFGLDIEHDGFDSIGGWISYMLGSNIKVNQSVTFENYNFTILELDKLRV
VKLIIKSVI
>gi|260688095|ref|YP_003219229.1| putative D-aminoacylase [Clostridium difficile R20291]
MIYDLILKNGFIIDGTGNPGFYGDIAIKDNLIAKIDSKINSNTNKEIDCCGKVITPGFIDPHVHEEIVAI
LDGKFEKFLKQGVTTTINGNCGHSITPYSSENVYEYMYKNGLLLEEEKKYLIDKNKCWNNFTEYCDLISK
SGISVNMGFLLGHGTIRWSVMGGSKDRPPTEKEKNEITDIINDGMKSGAFGISTGLAYIPSKYADIDELV
DIARQIKEHDGIYTSHIRDYIGRYNAVKEAIEVGQKSGARVQVSHLSPVEIEAFDEILKARYNGVEIMVD
TVPRSSGHCMKKKRVIQFIMAISSSLFELGIDGVMDDLRNEEGRTLILKEAFILGDRGSIILLNTKDINM
EKKSIREIATQKGIDEDKLLLDLLLDGDEELIFCLGGMYRADFPDKLHDNKIIDNPFVMVGSDCLFSVGG
DMSWFELQRRGAFPIFFNMYRKSGVRLEEIVRRVTSLPARQFKIKNRGIIKEGLIADIAVIDMDNYSYSR
SEDIDFSKPQLLANGVEYVIVNGKIALENGEITENKCGEVLKR
>gi|260688096|ref|YP_003219230.1| hypothetical protein CDR20291_2751 [Clostridium difficile R20291]
MSKVKSIYNEEYLPFMIRYGRLTLSLGIIAALVPGIILSFGFGIMPPISALLASTMAIVSMSAPNYIIEP
VSYSPILGIPGTYMSFLSGNISNMRLPCSIAAQKAAEVESGTEEGSIISTIGIAVSILVNISILTIGVIL
GGSVLSKIPAEVVEKLNLILPALFGSVFGQVFLQDKKLGLVAIVISVLTIILSKQGIIPQSLVVLICVFG
TILIARAMYKDKLSD
>gi|260688097|ref|YP_003219231.1| hypothetical protein CDR20291_2752 [Clostridium difficile R20291]
MDYLKLANHPLLWIASTVAVSIVVVQSLIFAIKSCKVGKTMGITDKQIKSAVKSSAISAIGPSMTIFAGM
VSLIVTMGGPIAWMRLSFIGSVIFESMSAGFGTDALGITLGSPEMTKLAFTNAVWTMILGSLGWIIFTLL
FGHKLDKITNVISSGKKSFIPIISLGAMLGSFAYLNADRVLRFDNGTIACISGMAIMVILCMLEKKKNIK
WLREWGLTISMFSGMIIASVI
>gi|260688098|ref|YP_003219232.1| putative dipeptidase [Clostridium difficile R20291]
MKSAYKGYEAYSYLEKGKDISSIEMCKGDKRVKEYLIELDDIQEAKVKSIVDEKIFISLHEHPVLFPEHL
ERDIFEYNREGKQRCAYEALSRGYYDAIFDNLMDGVCTITSNSGWKWDDILIDLGMRLCDLAHQDFVIKC
EKVEDICRAKSEGKVALIPTLEGAAPIENELDRIDILYGFGIRLMGITYSESNALGSGLKEEKDGGLTNF
GKKAVERMNKIGMAIDCSHVGVQTTLDVIEYSKDPIILSHVGARNLWNTKRLTPDEVLIACAKKGGVIGV
EAAPHTTITEKNKEHSIESFMEHFEYIKNLVGIDHVAFGPDTVYGDHVKLHSVLAAKFDIKKITGTKEHP
KVEYVKGLENPTETSKNIVRYLVKHGYSDEEIEKVLGGNILRVLKQVWK
>gi|260688099|ref|YP_003219233.1| putative sigma-54-dependent transcriptional regulator [Clostridium difficile R20291]
MKKHNILFVSTDDKINIDISKQLENIFGEFCNIDNLVYVNRINIELSSYELVVCSDNDIKEYIHNNIDKN
ILIVIVHRTINIENINQIISIENDSDVMVIDAYKESADETAKIIRKLGLIHINLIPYYPGCDKSKCEIGI
ITGSRNSIPQNIKQIIDIGDKVIDINTVIEIFTKLNISIDKLHIIKEKYNEDTVSGYRYYTTMNKTMKSF
LEIIDEGIASVDKLGKFIYCNKVFSNLVGIDQNEIISNNFMDLFSDKVVKKIFFQEDEVNDEVVNLNNKK
LIINKVNVYENNERIKSIISIKNISAIQVLEDKIQNKLQSKGFVSKYTFESVVGESKIIKEKINIARKIA
TTDFSVLILGENGTGKEIFAQAIHNESLRKNKPFVAVNLSSLSDTLIESELFGYDEGSFTGAIKGGKMGI
FERAHTGTIFLDEIGDISLDVQQRLLRVLQEKEVMRMGGSKIIPIDVRIIAATNKDLKKKIKEGSFREDL
YYRINVLHIEIPRLRERKEDIPLISKYFLDEINSNKCFTEESMQALTLYEWPGNVRELKNLIYYIDTIVE
EDRVDYEHLPEQFRFEKNNTLVNENFDSIILDFKQSNFFEESICILNSIETWNNKNILLGRNKLQEILKE
KDIVLSVDQIRKRIDKLKSHGLLLSGVKKQGSFITDEGKNFISYVKIKGVI
>gi|260688100|ref|YP_003219234.1| putative esterase/halogenase [Clostridium difficile R20291]
MYYVYVNDINIAVYDLNPSAKKTVLFIHGWPLGHKIFEYQTNILPKLGYRTVSIDLRGFGKSDATSGGYT
YSQLADDIYKVVHAIGLKDFTFVGFSMGGAIVLRYMSLFNGYGVSKLVLAAAAAPSFVQRPPEFPYGMTR
EDVNKLIAQACTDRPEMVTDFGEKVFASNPPESFRRWFNDIGFSASGIGTIGTAVSLRDEELFNDLKCVR
VPTGIFHGKLDEICPYEFAVFMNEKIEDSILYTFEYSGHAIFYDELKLFNQEFLQFLEE
>gi|260688101|ref|YP_003219235.1| putative bacterioferritin [Clostridium difficile R20291]
MSDAHYDMHKRNGYSSDEPYPEIKVLGLNKYYAELLMDDYAGVSSEFTSVNQYLYHNFDLDETHRELSEM
WINISITEMLHMEILAKTIRLLGGNPVYRGSTSSCGAYWNGGFVCYGNSICNRLKLDLHLEHVAINNYYK
DISLIEDPYIKAILNRIILDEKLHVSLFEKAIEKYCK
>gi|260688102|ref|YP_003219236.1| hypothetical protein CDR20291_2757 [Clostridium difficile R20291]
MLKGLSFRNARRQAGKYLIYWCSLIGSVALIYAFNALIFSDVMQELSSILNNGGSDEFSYMIIIFSFIIT
FILGWFVSYMMNFILKKRSREISTYMILGVDKKQIVKMLFIENLLLGASALIVGWILGIFVSKVLESIVI
NMFHGKYSLSPDFSLKAAGMTFLYFCIIYLIAQLKSNKKLVKMKLINLLNYDRYNENVLIHQTKTKSIMF
CVSVLCGGMGIFFFSIPSGRLTDVFLGLLLIVFCLIVLFMGFGSIAQNMFEKGMNWKYKKSHLFLYRLLA
SKINGISIIMGIIATLFTVSIACIGIANSFYSVMNKSVDLQQFDVSIFHPNESYDFSSYEGYLSETKGVK
KDYSYTLYTEEKTSFMKVRNNILSKYLKDIGRDLQYKDYTFAENQFDTFMKYSDYNILRNMLGLNPIKMD
KNQFIIHCMPYLADAYKNYIGEKYKLTISDKDLSIAGIYIENFSQYGGYGNGQEYIIVIPDYLIDNMKPL
YSLYVAITSEPLDSAYFTEFQKKFDTLENLNSGVVVAGNQGFVSKLRYDNKDYISGKYAMQSTGQAIILI
LPLFYLALIICIIGTVILSIQLLSENNIIIKHYGMLRTLGMIDSEVIKILKKHVCLYFSIPLIPAVIFGG
ILVSVFSYNMFNISFDAPVFFNIQIPILHAVAITLINFVVIYCIYVFITYVALRKEILHIK
>gi|260688103|ref|YP_003219237.1| putative lantibiotic ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MLLRVENIEKYYGNQKILTKALNDVSFQINTGEFVSIMGTSGSGKTTLLNCIATIDTVSAGKIYLENQDI
TELSEENLTVFRRDNLGFVFQDSNLLDTLTLEENIALPLTIKKVSPVEITNSVYNIATQLKIEEILSKFP
YEVSGGQRQRCAVARAVVTEPKLILADEPTGALDSNSSKTLMELLETINTILEATILLVTHDAISASYTE
RILFLRDGKIFNELRKGEKSRLTFYHEILDALSLMGGD
>gi|260688104|ref|YP_003219238.1| sortase [Clostridium difficile R20291]
MKKRILTILCVVLVLFISITGLDSMGFFSRSIIPLRSEYASFIRKNGTITEVKFTGPFNHNNIDLNKNVE
DTNKNGDDNELTIKYDIEVKKSLISSNEPTIQIQDSKESIYVYILNFSDKTIIIKNGKIVD
>gi|260688105|ref|YP_003219239.1| two-component system, sensor histidine kinase [Clostridium difficile R20291]
MRFCNFLQDKVLVILLNICCAISLVLYLHLIGIGQGELTLLIAAWVAILFCWICFCYQKQKKEIIKLRRI
VDELDKKYLFIEMIEKPTSNIEREYYNIIRLSLKSMTDHVSQIHREMYEYRQFIEQWVHEIKHPVTTSEL
ICENYKNEHTRKIRFQMEEIERHIERALYYARLGHVEKDYLISEITLKSIVEEVLAKNKLLLIQNNIHIN
IQDLEYSVYTDKKWIVFILNQIIINSVQYKSDSAEISFFAIKEDKSVKFTIKDNGIGIKESEIYRIFELG
FTGSNGRTTNNSTGIGLYLCYELSKKMGIDIDVSSSLGEYTAITLNFPINTAINMQKQCN
>gi|260688106|ref|YP_003219240.1| hypothetical protein CDR20291_2761 [Clostridium difficile R20291]
MQFFENNGYSTQTLDTNNCDVLQVIQESTPDLILLDINLPNIDGFSLCRQIRNCSTIPIIFITARDSAID
ELNGLTMGGDDYITKPYNLPLLLARVKNLLKRVDSSDKQKIKYREIILNLISATVEYQNAVIELSRTELK
IMYYLFQNVGSIVPRIDLVEYLWDNHIHIDDNALSVNITRLREKLRGIGITDLIITKRGMGYRI
>gi|260688107|ref|YP_003219241.1| putative regulatory protease [Clostridium difficile R20291]
MELKNFKDILFKKALSEGFEECEIYYYTGENLSINIYEGEVEKYNLDKSFGLSFRGKVNGKIGYSYTEIL
DDKAVDMLIKNVKDGVNTIENEDVQFIYEGDKHYNDVKTYSKELENLEADKLIDLALEMERETKAYSDKV
VNLSKCTISYSVSSNGISNTKGLNLSNKTNMLIGFVVPIIEDNGQKYDGIGYNRANSIEEIKPCEISKLG
VDNALSKVGGKSIPSGKYKTILLNEAMVSLLSTFSGIFNADSAQKGLSLLKNREGDMIASPIVTIVDDPL
LENGMASTPFDDEGVATFKKEVVLNGKLITLLHNLKTANKAGVKTTGNGIKSSYSSPISIYPTNFYIDKG
DKSLDEIIKDIDEGLMVTSFAGLHSGANSVTGDFSLAAKGFYIKEGKKVFPVEQITVAGNYFDLLKDIEV
IGEDLEFPMSSIGSPSVVIKELSVAGKDE
>gi|260688108|ref|YP_003219242.1| putative regulatory protease [Clostridium difficile R20291]
MLSKNIASKVLEKCLITGGDFAEIFEEDTINNSISLIDNKVENAIGGRNYGIGIRIFKGLKSIYAYTSDN
SLNSLLDVAYKAAVALGKLEDGKSVILNDSIKINNIHNIKIYPNSIGNRDKVSVMKVAYKSAKEFSNDIS
QVSVSYLDKDQKILIANTEGIYVEDRRIRTRLGISSIASKGNENQTGFEGPGGCKGFEIFEEIDPEYYAK
ESARVAHTMLHAKNCPAGNMMVAIDNGFGGVIFHEACGHSLEATSVAKGNSVFADKLGQQIASTKITAID
DGTIPNYWGSMNIDDEGNPTQKNILIENGILKSYMIDKLNGRRMGMNPTGSSRRQNYKFAPTSRMTNTYI
AAGEDRPEDIIKSIPDGLYAKKMGGGSVNPVTGEFNFAVSEGYLIKNGEIQEPVRGASLIGKGSDILMNI
DMVGNNVKQAQGMCGSSSGSIPTNVGQPMIRVKEITVGGR
>gi|260688109|ref|YP_003219243.1| putative oxidoreductase [Clostridium difficile R20291]
MNQEYVKGNPIFTNINKVPRQFPYLTDDIDTDVIIVGGGVTGCICAYYLAKNNIKSVILEKGRIAHGSTS
VTTSLLQYELDDNLIDLTEVMTLKDALKAYNLCTSALEELDTFIKLYGNKCDYAKRDTLLYTANKLEIKA
IKEEYNLRKENGFDVEYIDESTNPFSFDLKSGLIAKNGGRELDPYKYSHHLIDVSLKNGLQVYENTEVKK
VDLSNDKVTAEVSYGYKVHGKKLIVATGYNTSLFTKRNFATKSNTFNIATKPLKNIASWKNNILIRDNCD
PYNYLRTTKDNRLIIGGEDVSFDDIENETLANEKYDILEQRLKSMFKDIKDIEVEYKYCGCFASTLDNLG
FIGPDNKNNNLWYCLGYGANGILFAILGGIMLSELYLGKQNKNMKLFKVDRFDK
>gi|260688110|ref|YP_003219244.1| putative sigma-54 dependent regulatory protein [Clostridium difficile R20291]
MKYGGIIMKEILVIAPTKGTYEKSIHIVKKNKYTNIDVVFGNLKEGIPLAEKSINHGTRIIISRGGTYNM
LKATYNIPIVEIKVDAYDIIKSYKEVKNSNEPFGIIGFNNVIYGFDIIEEILNKKITMIEIEKEEEIYDA
IEKYRKKGINTYIGDTTVAHIVKRLNCKGILIESREENILRAIQQAEQILEATKDEQKRRLQIEAMTDFV
HDGIITVDKNFKITLFNKSAEKIFGIKKENALYHNVVDVIPNTVLPQVVETMEPQIGEIQNIGSTKIITN
RVPIIVDGQIQGAVSTFQDSKEISSFEHTIRRSLLSKGLSAKYTFDNIIHASEKTKDCIELAKKYACYDT
PMIITGESGVGKELFCQSIHNYSKRKNAPFVAVNCAAIPPSLIESEFFGYEEGSFTGARKKGKAGVFELA
HEGTIFLDEISEIPLELQGRLLRVLQEKQVMRIGGDKVIPIDVKIICASNKDLKNMMRNGLFRQDLYFRI
NILTLYLPSLKERKEDIIKLSEFFIHKYSSKYNKTPLIITPNIKKALLEREYEGNIRELEGMMERAVIVE
SFDSILLEKVSNEYTNNIVDKDNSDFECSNLDLKTLEKKYIYKIYNENNRNTTKTCEILKITRSTLWRKL
KEIEDDV
>gi|260688111|ref|YP_003219245.1| 2-keto-3-deoxygluconate permease [Clostridium difficile R20291]
MHILKSVKKIPGGLMVCPLLLGALFNTVCPQALEIGGFTTSLFKTGAMSILALFCLCNGAQINIRQAGKP
LTKGIVLTATKFIIGAVLGIIVSKFIGPKGIIGITPLAIVATMTNSNGGLFAALAGEYGDSTDVGAISIL
SLNDGPFFTMLAFGVTGLANVPIVALFAALIPILLGFILGNLDEDIREFLAPGTTLLIPFFAFPLGAALN
FNQIITAGLPGVVLGLGVTIITGMGGYFVMKLIRAEHPAVGAATGTTAGNAAGTPEALAAIDPTLATIAA
VSTVQVAAAIIVTAICCPMLVSYLDKREKKKKSIFKTNKNIEVN
>gi|260688112|ref|YP_003219246.1| altronate hydrolase (N-terminus) [Clostridium difficile R20291]
MNAIIHANEKDNLVTCVRPLVKGEKVSIDGKSYIVNDNIPVFHKMATEDVKKGDVVYKYGEIIGIATVDI
KTGDYVHVHNIESTRGRGDKK
>gi|260688113|ref|YP_003219247.1| putative altronate hydrolase [Clostridium difficile R20291]
MKLMGYLRENGQFGIRNHVLIIPTSVCSSETATRIASLVPGAIAIPHQHGCCQIGSDIELTAKTLIGFGK
NPNVAAVLVVGLGCDGIQAKELASEIATTGKKVDYVVIQECGGTLKTVSKGTEIVSKMAREVSKEVRVEF
GMSEITLALECGGSDPTSGIASNPSIGVASNLLVDEGGSSILSETTEVIGAEHLLATRFEDEEMKDKFLK
FVSDVEKRAIAMGEDLRSGQPTPGNKAGGLSTIEEKSLGCMYKAGNKPFKGALEYADIVPPDKKGLYFMD
TPGQDIDSITGMVAGGAQIVIFSTGRGTPTGSPISPVIKITGNSDTYNKMPDNIDINAGRIITDGAKIAD
IGQEIFNEIIEVCNGKHTKAESLGHREFGIYRISSTF
>gi|260688114|ref|YP_003219248.1| putative signaling protein [Clostridium difficile R20291]
MNFENTKNKKIIATLLLTLLLIVSLTCVNFIMNLNKVTHNETERYLVEVSQSISTTINVKCKSIFRTLYS
MGDTYFEINDSEKEVNRYLSKKLKLFEFDWLGIIDSNGNFVSALKDTGNVKGQDFYRKALQGKETITPVK
SQSGTYGILYSVPLYNGDKIVGAVAAWNTIDTMRNLLSVESFHGEGFSQIIDQDGNFIVSSANKNAPKNV
VNFFDMIKHQGKQVDKNKLEEMKINLKKNKTGSMYYTLNDGISKAMHYLPLQEENLYLLSVVPTKTASAQ
FDLLLKKAIFINILIVILFLLLIILIMFINQKNRAQLIKIAYVDSVTKGYSKARFDIEAKKIIQSSSSES
YSLVSINIQKFKLINDSFGSEAGDKTLKYIHDVISNYLEPGELLCRVSNDQFNVLIKTIPQKEILKYIEN
ITNDINSFNKNEECKYFIALSIGVYKIDDPNLPLVSIQDRANVARKNNKGNIGNHPLYTCVFYSDLERLK
MIKEKEMENRMEEALNNNEFIVYLQPKISLKDNTIVGAEALVRWQDPNKGLIPPDEFIPFFEKNGFITKL
DHYVFEKVCSMIRKWIDNGETPMPVSVNFSRANLNNIDFLEKYRMLRNKYNIPAKLLEIELTETLVFENL
QKLINIIDQIHEEGFQCSLDDFGSGYSSLNMLKEIKVDTYKT
>gi|260688115|ref|YP_003219249.1| putative drug/sodium antiporter [Clostridium difficile R20291]
MENQEALRHEKIWILLFRYSIPAIIAMMVTSLYNVVDRAFIGSMEGIGSIAIAGLGVTMPVFTLIIAFGM
LVSVGASTRLSIKLGERNREEAEKILGNALTLSIIISLIITILGLVFLEDILFILGASKDSIFYAKDYMS
VILIGSIFNLVAFSLNNAIRAEGNPKLAARTMIVGCVLNLILDPIFIFVFNLGIKGAAIATVLCQIVVFF
WVTYYFIRGKSTLKLKKCNLKLNKDIVKKVFAIGMTPFAMEVAISITHMFTNNSLKVYGGDLAIGAMTAL
TSILLMFMMPVFGLNQGMQTIISYNYGAKQYERAKKTLILSIIVSVVILSFGFLIVQVFPEVFVGIFNKD
SDLMDIAVRGISINLITLPIMGISIVGPVYFQCISKVKHSMFLTLLRQFILFIPLIIVLPIQFNLDGVWL
AQPVADFIAMIIVLLFLKREFKTSRV
>gi|260688116|ref|YP_003219250.1| putative ferrichrome ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MNCINTKNLNVSYGNTDIIKNLNLNIPKGKITTIIGANGCGKSTILKTIGRIISPNSGKIYINGEDIYKK
KSKEIAKDMAVLPQSPQAPSGLTVSELISYGRFPHKSGFGNSSKEDREIVNWSLEVTGIAEFKDRNMEDL
SGGQRQRAWIAMALAQETDILLLDEPTTYLDLAHQLEILKLLDELNKKQGRTIVMVIHELNNAARFADHM
IGIKKGKIVCEGDAYDVMTKDNLKELFNIDAEIATDPRTNKPICITYDMV
>gi|260688117|ref|YP_003219251.1| putative ferrichrome ABC transporter, permease protein [Clostridium difficile R20291]
MKNIIKINSKTLLVISILMVLIFITFLLSLNMGSFSIEPMDVIKTFLGQGQRNHEIAIFKLRLPRIVIAL
LVGSALSTAGVILQGVTKNDLADSGILGINSGAALFVVVYIYLMNGNVYEGMSNLTVFTMPIVALIGALF
GAFLIYSLAWKGGINSSRLLLIGIGVNIAFTSILTIFQLKFTTQEFNRVMAWTSGSIWGTSWKYVIAVLP
FIVIFMGITIYKSKYIDVLNLGDEVSISLGVDVEKQRRRLIIYAVILSGVSTAVAGSISFLGLIAPHIGR
KIIGPKHKRLIPVSALIGTLLLLIADTISRNLLAPIEIPVGIVVSIIGVPYFIYLMLVND
>gi|260688118|ref|YP_003219252.1| putative ferrichrome ABC transporter, permease protein [Clostridium difficile R20291]
MTKLSKKNITYLLILVSIVVLVFGIVLSITIGAKDMNLSTVIDSLIKMEDGINMRIVKDVRLPRAIAAAL
VGGFLAVSGAIMQGITRNPIAEPSVIGITQGATFAISISLVLQKKLPQLIHGSFSVMMFAFIGASISGLF
IYFISSKSRGRVNNVKLALAGVALGTLLISLASAISMYFNLSQQLSFWISGGLVGVKWEGIKLLFVAGGI
GFILAIIMAPRITILSLGEEVAIGLGQKTNFVRFICIVLVILMTGASVSVSGNIIFIGLIVPQIAKGIVG
SDYKYIIPSSLVLGAVLLVYTDILSRMINPPYETPVGSITALIGVPIFIYLVRKGEK
>gi|260688119|ref|YP_003219253.1| putative ferrichrome ABC transporter, substrate-binding protein [Clostridium difficile R20291]
MKKIKSLAIFISIITTLVLVTACSDKNTEDKDKSETRVVQSVKGEVKIPSNPKKIVDISGSSEELLLAGY
KPVATANVDSYETDKLPSYIREELKGVKIVGHSMMDTMDMEAILEVNPDLIIMSQRQEKIYDQLKEIAPV
VMMKDYANDWRSKLTDVSKLFDKEEEAKSWLQKYDEKATKLGKEVIEKNGEKTYLPVLASSGQFMVFSDG
GIGTLINDDMKLARPKNMPKQDGITLPMVSMEGLTDIDADHIVVIATEADKKDLENSAIWSQIRAVKDGN
VTILDAAPFFSQSYNPIGKELLLESVKNELTK
>gi|260688120|ref|YP_003219254.1| hypothetical protein CDR20291_2775 [Clostridium difficile R20291]
MNLVRRIQNMVHLVYCDNAGKKGEKVLDKILAGTKTMVIRGAAGRKIPHSRVFEDELLYFMEKGTGKISA
KATVKKVENYVKLTEDEISKILNENQPKLNLSEKQKVRWHKKCLCLVEFENVEEITPLDFDHQGNMDDWL
IVEKIEDVVVGTSIPYNYEKSKF
>gi|260688121|ref|YP_003219255.1| PTS system, lichenan-specific IIa component [Clostridium difficile R20291]
MDEKMIEISFGIIGFAGDAKGLAFEAIKEAKSGNIDKARECIEKSKESIHKAHKFQTELIQNEANGNKTE
ISVILIHAQDHLMTAMNFQQLAEEFIDVYERLESK
>gi|260688122|ref|YP_003219256.1| hypothetical protein CDR20291_2777 [Clostridium difficile R20291]
MTKIIINADDFGYCEAVNYGIISAHNNGIVRSTSMMANMPGVEHGVGLLKENKTLNCGVHMTLSCGRPLL
SNLKTIVDKDGFFIRRITDEIIEKMDCDEIYRELCAQIDRVKGLGIDISHLDSHHHIHTLVSLKPVVEKI
VTKYNLPIRGGFEYNLEYSKVVPLIDSFYKENVSEEYFIKNIDEIMKYDVVDIMSHPAFLDDYILNSTSY
AIDRTKEHKILTSKKVKEFLEKNGLVISSYRDI
>gi|260688123|ref|YP_003219257.1| 6-phospho-beta-glucosidase [Clostridium difficile R20291]
MKKGLKIVTIGGGSSYTPELVEGFINRYEELPVKELWLVDIEAGKEKLEIVGNLAKRMVKKAGVDMKINL
TLDRREALRDADFVTTQLRVGLLDARIKDETIPLSHGVMGQETNGAGGLFKALRTIPVIFDIIKDVEELC
PNAWMVNFTNPTGIITEAVFKYTNFRRYIGLCNVPIHLKNDVAKLFNVESDRISMDFAGLNHMVYGLNVS
LDGEDVTKEAIDKFVKADISMQNIKAIDFNAEFVKSLGAIPCPYHRYYYKTKEMLEDELREFKEGKARGQ
VVKELEEQLFELYKDEKLDVKPPQLEKRGGAYYSDAACNLISSIYNDKKDIQVVNTLNNGSIRDFKDEQA
VEVSSVITKNGPKPISIGYLPDSVHGLVSQIKSFEVLVAKAAVYGDYESALLALCINPLIPSDDLAKTIL
DEMLEAHKDYLPRFNR
>gi|260688124|ref|YP_003219258.1| PTS system, lichenan-specific IIc component [Clostridium difficile R20291]
MEKFMSFMDKYIVPVAAKIGAQRHLVAVRDAFIVMIPITMVGALGTLINNLPLEAYKNLMASIFGENWTT
FGGDLWWGAIGTMAVFLVIGVAYFLAKSYESDGLQSGLIALSIFFIMAPQIGKIVPEGGTTVVEGWGMIQ
QTYLGTAALFSSILIGLLSTEIFVRLSKVKKLTIKMPDGVPPAVSRSFAKLIPGMLTIMIFTVIGIFIKM
LSNGSFLTDILNTYLGAPLSNVADSLGSTMLIAFIIHILWTVGLHGANIALPFTETILMKLGGENAALAQ
AGATEGYHVLAGAFFDAFVYLGGSGMVLGLIVALLIAGRRRKEMIVLGGPPAIFNIGEPLIFGLPIVLNP
IFMIPFVLAPVICSAVSYLAIDFGLVAPVILPKIPWVTPPILGGAMATGDWTGGALALFNLILSILIYIP
FVIASEKMEANKLKINN
>gi|260688125|ref|YP_003219259.1| PTS system, lichenan-specific IIb component [Clostridium difficile R20291]
MIKIMLACSAGMSTSLLVTKMEDAAKENGIEAKIWAISEVNLKNEIENCDVLLLGPQVRYVLGKATEMAK
PYNIPVEVINMMDYGRCNGKAVLDRAVELNSSK
>gi|260688126|ref|YP_003219260.1| GntR-family transcriptional regulator [Clostridium difficile R20291]
MKEPIYKVIENHVRELINSDSLKEGDLIPSEKQLSEEFNVTRMTVRSALNNLVKEGYITRQRGVGSIVIA
NNIYDNISSVSGFTKEMESKGYKVSNILVSLEIVQADENLSSKLNISLEENVWEIKRVRLANDARVSYMI
TYMPVKLFPNLNKTHCENSLYNFVEEVCGYKIAMSEREVQAVISNEECMDNLKLEEPEPLLYISQICKLQ
NSEIFEYSHTYHYGYTLTLNAVVE
>gi|260688127|ref|YP_003219261.1| putative drug/sodium antiporter [Clostridium difficile R20291]
MGYNMIDMIWVGKAGSKAVAAVGTAGFFPWLAMAFIMISKVGGEIKVAQSIGANNISTTKSYMKSAIEIN
IILAIIYTISLIVLNKQLIGFFRLGDLEVITMSRQYLIIVALGMVFYFINPVFTAIFNGLGNSKTPFRIN
TVGLITNIILDPILIFGWGFAPKLGVAGAAIATVFAQIVVTTCFIYIIVKSKEEYFKLRLFKEIETKYYK
VLYKLGLPIAIQSGMFTVFSMLLGVIVASWGPVAVAVQKVGSQIEAISWMTAEGLSVALGSFVGQNYGAK
KYSRINKGCKIAITVSSVLGIITTLVLVFAGESIFSIFIDESEAIEKGAIYLKILGYSQFFMCLEIITTG
AFKGLGRTYIPSIIITILTGARVPLAYFISRPEMLGLNGVWWSITLSSILKGILMISLFISLLKLGKLYK
MSE
>gi|260688128|ref|YP_003219262.1| putative signaling protein [Clostridium difficile R20291]
MKINKKFNRVDMQVSILTAIIVIISSSCVYFFNYTLTYKSMIYSLSERSKHIYEYVERNIDKNTFTEINS
KEDQSKKSYKSSKILLESVKNTTGVMYLYTAKKTKDGSLVYVVDGLNSSRSDFRNAGDLIEKEIWGDLNK
ALDNHILLPKKIKSTSWGYIFISYFPIHNDVGKVVGVIGIEFEAKHQYNTFKFISIVTPIIALLTCLISA
LIAVILFKRISNPTYTDFANTDYLTGLKNRNAFEIDMNNLNNSNLKNLISIISIDLDGLKKINDKFGHQT
GDLYIKQASKIIQDVINKKYIVYRIGGDEYIIILKNLSHKEINSIINNINLKIVEENSTNELKLSMSIGY
AIFDEKVDVSLFDTYRRADSQMYDNKKKINK
>gi|260688129|ref|YP_003219263.1| ABC transporter, permease protein [Clostridium difficile R20291]
MNNNAISSKSISLKSKMNLDIKKCMLTVLVMSLVIFLLAPIIYLFVQAFLDKDGVFVGLQNFQEYLASES
LLNSLKNTVFVSVISTVISLTLALVYAYALTRTKIKFKGFFKSLAMFPMFAPTMMHAIGLVYLFGNQGLV
TNLLGVHVPIYGAVGIILAQIIYVFPQSFQILYISLSSTDYRLYEASNTMGISKIREFISITIPSIKYSL
ISSAFVSFTLCFTDFGAPKVIGGEFNVLSIDVYKQIIGQQNMPMGATVSILLLIPAIISFIVTKKIEKNQ
NSYITSKSIPYKVKTNKLRDSILGGVVGIIAFGIIAVMLTVILSSLISVWPYDLRLTLEHFSMKNSIDGI
KPFINSIKMSLLTAILGTSFVFLFAYLNEKTEKAPYLKSFGYFLSTLPMALPGLVLGIAYVLFFNKLEFN
FMDTIYIKNLFNGLYGTLLIMVICNIVHFFSVAFITATTAIKKVDKELDMVAKSMGINSASILKNVTIPL
CLPAVLENFMYFFLNSMVTISALVFIYTASSKVAAISIVQLDDKGSTAQAAALAVLILVTNILVKVIYEF
IKNRLEKRTNFN
>gi|260688130|ref|YP_003219264.1| ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MSYLKINNVFKSYDQKRVLNNISLDIEEGEFLCLLGPSGCGKTTLLRIIAGLEDVNSGTIILQDKDITNL
EPSKRGFGIVFQSYALFPNMTAYNNIAFPLKERKVSKEKIDNKVKEVLETVGLTNEAHKYPKALSGGQQQ
RIAIARALALEPKFLLLDEPMSALDAKVRHKLRMDIKRLQKELNITTIMVTHDQEEAITMADKIAILNGG
DIMQIGTPEEIYQNPQNLFTAQFIGDTNCFDNGDSILTVRPEYVQIEKSTKENYQGIISNIEFRGNLLRV
EIKDKLNENFIISDVSIKEWVNLNLVEGDLVKISIDEKYYLKYPKVKGA
>gi|260688131|ref|YP_003219265.1| ABC transporter, substrate-binding protein [Clostridium difficile R20291]
MYYINISKNNKKQIKKGKNTKGEDMKEFIFTCLCIVVITFMTSCISTTPQTTQGKGNNKLTIYAALEEEQ
IAYYMEGFREEYPNIDVEIVMDSHGVIASKLLAEKDNPQADIIWGLSAMNMIELKKDGALEAYKPKNYDK
VDKKFKDTEDDVSWVGMSVPETAIVVNYKELKKLGIDIPKSYEDLIKPEYKGLITMPNPASSGTGYLTVS
GLIQMMGEKDAYNYMDKLHKNIATYTHSGSKPAKLAGSGEYPIGITLGYRATQQLSSGEPIEVVFPKEGS
GWDLEANALVKKDNIKKEAKLFLDWAISDSAMDRYAHEVAVTSIKTYNPVPKGYSKQPFEQLIKEVDLNS
AAKNRSTVLKTWESKYGSKSESK
>gi|260688132|ref|YP_003219266.1| V-type sodium ATP synthase subunit D [Clostridium difficile R20291]
MARLNINPTRMEMTRLKKLLKTATRGHKLLKDKLDELMKQFLEIVRENKRLREEAENALDTAYKNFIIAR
AVMSQEYLGSALMMPKQSVSVDVSTRNIMSVDVPVFDFKTENNQSDIYPYGLAFTSGELDSAMEAFSDAM
QPLLRLAESEKSAQLLAQEIEKTRRRVNALENVMIPNYIETIKYIAMKLEENERASTTRLMKVKDMVLKK
ALEEKKKNDLVV
>gi|260688133|ref|YP_003219267.1| V-type sodium ATP synthase subunit B [Clostridium difficile R20291]
MIKEYKSIQEVAGPLMLINGVEGVKFDELGEIELSNGEIRRCKVLEVNGDTALVQLFESSTGINLAESKV
RFLGKSLDFGVSPDILGRVFSGMGRPIDGGPEIIPDKRLDINGAPINPAARDYPAEFIQTGVSAIDGLNT
LVRGQKLPIFSGSGLPHANLAVQIARQAKVRGTDSKFAVVFAAVGITFEDAEFFISDFKATGAIDRSVVF
VNLANDPAVERVSTPRMALTAAEYLAFEQDMHVLVIITDITNYAEALREVSAAKKEVPGRRGYPGYLYTD
LATMYERAGKMKGHEGSITMIPILTMPEDDKTHPIPDLTGYITEGQIILSRELYKKDIQPPIDVLPSLSR
LKDKGIGKGKTREDHADTMNQLFAAYSRGKDAKELMAILGESALSEIDLMYAKFADEFEKEYVSQGFRTD
RTIEQTLEIGWKLLSMLPKSELKRIRDEYFEKYMPKE
>gi|260688134|ref|YP_003219268.1| V-type sodium ATP synthase subunit A [Clostridium difficile R20291]
MKTGTIVKVSGPLVVAEGMRDANMFDVVRVSDKHLIGEIIEMHGDKASIQVYEETSGLGPGEEVVSLGMP
MSVELGPGLISTIYDGIQRPLEKMYDISGTNITKGVEVSSLDRTTKWEFKPKKSVGDKVVAGDIIGGVQE
TAVVECKIMVPYGVKGTIKEIYSGEFTVEDTVCVITDEKGNDIPVTMMQKWPVRKERPYREKKTPDSLLV
TGQRVIDTFFPITKGGVAAIPGPFGSGKTVTQHQLAKWADADIVVYIGCGERGNEMTDVLLEFPELKDPR
TGESLMQRTVLIANTSDMPVAAREASIYTGITIAEYFRDMGYSVALMADSTSRWAEALREMSGRLEEMPG
EEGYPAYLGSRLAQFYERAGKVNCLGMDEREGTLTAIGAVSPPGGDTSEPVSQATLRIVKVFWGLDASLA
YKRHFPAINWLTSYSLYQEKVDVWADKNVNDNFSAQRAQAMKLLQVESELQEIVQLVGVDSLSDGDRLIL
EVTRSIREDFLHQNSFHEVDTYTSLHKQYRMMGLILKFYKSAQDAIKQNVTINDIIKLSVLEKIGRAKYV
EEGDIDAAYDSIEDEIDNELADLIKKRGAEEL
>gi|260688135|ref|YP_003219269.1| V-type sodium ATP synthase subunit G [Clostridium difficile R20291]
MLMYKVGVVGDKDSIMGFLALGIDIFPAYDSDEIKKSIHKLVEDEYAIIYITEQASLLAKESIAKYKDYQ
LPAIIVIPGIGGSMGLGMNEVRESSKRAIGADILFKE
>gi|260688136|ref|YP_003219270.1| V-type sodium ATP synthase subunit C [Clostridium difficile R20291]
MAEEKTYPYAVARIRVLEKQLLNRQMFIQMAEAKSPEDSLRIIAEAGYADTSNNNIHNFENILTQELSKT
YEILKSLAPEEKFVDVFLYKNDYHNLKVLIKEEISGVDGEKYLIDGGTIPLIKLRESLANRSFSDLPKIM
SSAILEAFDVYNKTQNGQMVDIVLDKATFTSMKETAKESQNKFVIDYVMKVCDLTNLKSFIRVKNMKKDF
DMFMNVFVSGGSLDKEKFLEAFSSDTPASCFKSTSYSDVCKNGMDSGFTVFEKLCDDYLMEYVRGAKFKP
LTLEPLIAYLYAKESEIKTIRIILTSKLNNIDADTIKERLRDAYV
>gi|260688137|ref|YP_003219271.1| V-type sodium ATP synthase subunit E [Clostridium difficile R20291]
MGNEQKMIDRIIADAKQEAQEILDKAKSEADLKVNSANEKAEKEMASYTKLAEAEAEKAASKEISGAYME
AKKQILSKKQEILEEVILEAKNKLLNLKDNEYEEIILNMIEKSNCTDDSEIVLSKKDKKTLKDVLSKKGI
KVSDETRDITGGFIVKKGDIEYNYSFEAIIAVEHEYIEQIAAEILFN
>gi|260688138|ref|YP_003219272.1| V-type sodium ATP synthase subunit K [Clostridium difficile R20291]
MEFLNALGNGQFLAISGAAIAALFAGMGSAKGTSIAGQAAAGVVTEDPSKFGQLLVLQLLPGTQGLYGFI
IAFLILSKAGIIGGDAIPTSAQGLQLLMAGLPIGLVGLVSGIAQGKAAAAGVGIVAKRPEELGKAITFAA
IVETYALLGLLVSFLAYNGIAIG
>gi|260688139|ref|YP_003219273.1| V-type sodium ATP synthase subunit I [Clostridium difficile R20291]
MAIVNMNKISIVGLEAQKSQILKLLMNRGFVQIDDSAFLTEEEELKNYLVKDSEESEVIMLEQKMSHVNQ
AINIVSSLVKQKKSLLAPKREFNKIDSEKEGQVYAEALELNNLHKEIGTIRSNINLLNNNKSMLEPWVNF
DIPLENMETKYTKTILGTVPISANIDALRVKLEDEIPESVIGIVNSDKLMNYVYLITLKETFDDVLEVLK
EFNFSVVSLPNEEGTPLQAIKKYNEMIIRQENVSKDKTEEIKRHADSIHMLENLYDFYTIERDQKKIIER
LVKTKTTFCLNGWLPSKRADELIKEITEKFDCCVQTEEGSKEEGFPILLENNKLVTPFESVTNMYSYPST
KDIDPNTILTFFFVVFFGMMLSDAAYGLIIAVVCGFVVYKLKIQKGEGNLIKLIGICGVSTTVWGLIFGG
ILGDLIPIKALINPLEDVMTLMGMSLLFGIIHIYVGLGIKAYTLIRSGKVIDAIFDIGFWYLCITGVCLL
IIPFVAGDIGVFSEVGKYLAIIGAIGLVLTQGRSFKGIPVKLFKGFSSLYGITSYFADILSYTRIMALCL
TTGVIAQVINLLGAIAGPILAVVIGVVGHTINLLINALGAYVHTSRLQYVEFFNKFYEGGGVPFVPFKYK
TKYTSINKKEM
>gi|260688140|ref|YP_003219274.1| hypothetical protein CDR20291_2795 [Clostridium difficile R20291]
MAFEIIKSIVEAEQTADSIKVKAVTDAESIRADAVNKCESIFADVRKQAKLMEETLIEKAVTDSRAEVDK
ILANAKSECLKIEKTAEERKSKAIEAVIGKVVR
>gi|260688141|ref|YP_003219275.1| hypothetical protein CDR20291_2796 [Clostridium difficile R20291]
MNEKLTKILEEAKNDDEFRKELIKTREQRDVMDSFCKVVTSRGYDITVGELFSMGEEYTSNLLKSVNGGA
AYPIEDWSDWYEDFFIMLSNI
>gi|260688142|ref|YP_003219276.1| putative peptidoglycan-binding exported protein [Clostridium difficile R20291]
MIDGKEVKQESGQKNLKFKIAIVVGVLFVAYIGMAIFFRNHFYFGTTINGVKASGKTVEQVNDLLTSSTN
SYTLNLEERNNKKEQIKAKDIDLKFTPDDKVQKIKDSQSAIGWIGGIFKSKEYNNMITLSYNKDLLEKRF
NALSCFDSKNVVEPKSAYPKYDSTKNAYVIVPEVLGNKVKKDDFYKLVQNSINSGNTSISLDESKVYEAP
NNTKDSEKLKQAIKTLDKYVGVVVTYDFSDRKETLDGSEINKWLKVDSEKNYDITFDNDAMVEYTRSLSK
KYSTFGDSRPFKTATGKDITISGGIYGWLIDKKKEAEALVDVVKAGKNVTREPIYIQKAVSRNKDDIGNT
YVEISLSGQHMWFFKNGEMLVSTDVVTGDLARGFATPSGIYPLNYKARNVSLTGQGYSSPVSYWLPFNGN
IGIHDATWRNSFGGGIYKSSGSHGCVNTPFSKAKKIYENIEPGTPIILY
>gi|260688143|ref|YP_003219277.1| hypothetical protein CDR20291_2798 [Clostridium difficile R20291]
MIDVSIDDKLKERWPNAKLGCIQAKVAVNKSSEKLINEINEFCDTINQSLKVEDITKLDKIKDARNAYKE
LGKNPSRYRTSSEALVRRIIQGKGLYTINNIVEINNLISIKSLYPVGTYNVSKLHSPVCFTVGDEGEQYK
GIGKELINIENLPILSDSVGKFGSPTSDSERAMITEDANEILICIFSFSQESDIEEYFGYAKELLKEYAD
GKDIETKIIK
>gi|260688144|ref|YP_003219278.1| putative signaling protein [Clostridium difficile R20291]
MTGRNKSFTLITILFLTSLFLTMGYIYIEDTKHLLMSEAKIHIKEVAVQGSQLAQRQIEKDLDVLNIFSN
YYALNQDIPNEEKMKNLLDEMENQKFYTMAIVDINGNAENTKGDKFSVKDREFFKNSIKGKKYVSSPYVD
EVNKSIKKITISVPLLNNDKVVGVLYCTYNINTLMKLINVSFYENNSISYVVRNDGTIILHPQEDSLSKN
IYKLLKQDNDIREINRLKKELQENKTGATVLNMLEERRYLGYATMDNGNSENNYIKDWNLIFSIPETVVF
SNSEQIINRAIYAVLFIILIFIAIIFYIIYIKKSNEKEILSLAYEDKVTHIGNQNKFYRECSKYLLDKPS
LNYIIVYFDINNFKMINDTFGYEFGDNLLITIAKALKEELTEGEVYARLSSDYFAIFCDYKNGKNKRIRK
IDSIRNNIESNLSIVFEISLCVGIYFVEEGEVDIQKAVNKANMARSVAKGKNINYAIYNEDVRNKLSEES
MILDDIKIALVKNQFEVYYQPKFSLVTGEMIGSEALIRWNHPEHGFISPAVFIPIAEKSKLILKIGRFVF
ERVCNDLSEWKKQGKKIVPVSINLSRVELYQPDIVKFINKTIQMYNLSSDLIEIEITETVAINELNILKN
VLNELRKYGFSISMDDFGTGYSSISCLRDMPIDILKLDKSFLNGIEHDERSRNIAKSIVSLAKSLDLVVI
IEGVESKEQAELMKQFGCDLVQGFYFARPMPAKNFLDLL
>gi|260688145|ref|YP_003219279.1| aldehyde-alcohol dehydrogenase [includes: alcohol dehydrogenase and pyruvate-formate-lyase deactivase [Clostridium difficile R20291]
MAHKEQVIIENKKENEVMSVGLDTVNNVESLVKKLAKIREAQKIFATYTQEQVDKIFLAASLAANKQRVP
LAIMAQKETGMGIAEDKVIKNHYASEYIYNAYKETKTCGVIEKDEAFGMTKIAEPIGVIAAVVPTTNPTS
TAIFKALLALKTRNGIIFSPHPRAKNSTIEAAKVVLEAAVLAGAPEGIIGWIDEPSLELTTTVMKEVDLT
LATGGPGMVKSAYSSGKPAIGVGAGNTPAIIDESADIKTAVNSILVSKTFDNGMICASEQSVIVLENIYN
EVKKEFKERGAYLLDKDETEKIRNIILVNGGLNSKIVGQTACTIAKLAGFEVPVDTKVLIGEVESVEIEE
AFAHEKLSPVLAMYKASDFDNAVRKAEKLVEDGGFGHTSSLYIDDVNQREKLDKFTSAMKTCRILINTPS
SQGGIGDLYNFKLAPSLTLGCGSWGGNSVSENVGVKHLLNIKTVAERRENMLWFRSPGKVYFKKGCLGVA
LKELKDVMNKKRAFIVTDTFLYNNGYTKAVTDLLDEMNIKHTTFFEVEPDPTLECAKIGAKAMREFNPDV
IISIGGGSAMDAGKIMWTLYEHPDVDFQDLAMRFMDIRKRVYTFPKMGEKANFVAIPTSAGTGSEVTPFA
VITDQDTGVKYPLADYELMPNMAIVDSDMMMNMPKSLTSASGIDALTHALEAYVSMLATDYTNGLALQAI
KSIFEYLPRAYDNGAKDPEAREKMANASTMAGMAFANAFLGVCHSMAHKLGAFHHVPHGVANALLITEVM
KFNSSDAPKKMGAFSQYKYPEALKRYAEIASFLGLKGNSDEEKFQSLLVAIEDLKLKVGIPKSIKEFGVE
EPKFMDSIDEMVIQAFDDQCTGANPRYPLMNEIKDMYLNSYYGR
>gi|260688146|ref|YP_003219280.1| hypothetical protein CDR20291_2801 [Clostridium difficile R20291]
MKKLKTISIFSLIISVILTIGGIGIVTYYVDNLFIRGLSVFVLIMSSSFVSTTVRLIFEESKRYKF
>gi|260688147|ref|YP_003219281.1| dipicolinate synthase, B chain [Clostridium difficile R20291]
MRLEGLTIGVGFTGSFCTYDKIFIELENLVKEGANVHTIFSDVSQNIDCRFGNSEEFMKKAYELTGNKPI
VTIEEAEPFGPKGIADIIIIAPCTGNTAAKLANGITDSPVLMAAKGHLRNDKPLVISISTNDALSFNFKN
IGILLNSKNIYFVPFGQDNCKAKPNSMIAHTELIIPTIELALENKQLQPVIKSPHQ
>gi|260688148|ref|YP_003219282.1| dipicolinate synthase, A chain [Clostridium difficile R20291]
MNQCIDKNILYIVKEAYNMSNQYDITVIGGDLRQVYMVKKLINKGYSVVTYGISNEIINGIVGKSTSLAE
ALSKSSIILCPIPFTKNQVNIENTDDCLDATIDNLLINLSPNQILFGGNIPTKVCKFCEQHSIQIYDFMK
MNDVAILNAVATAEGAIAEAIKRSIINIHQSNCLVLGYGRCAQILAKKLYALDANVCVGARNNDARSTAN
AFGYSSISLSQLDEKLLQFDYIFNTIPECILTKERLEKVSQEVTIIDIASSPGGVDYSVVKEVGINATLC
LGLPGKYSPKTSGEILVNAIENIINERRD
>gi|260688149|ref|YP_003219283.1| putative AMP-binding protein [Clostridium difficile R20291]
MNYYELLRIKKERHKNKNFLIIDGEKYTYENILSYSEQLGKQISLGENISILIYSKNIMFQLISFFAINY
SKNIPIICHYNLSKKVLDDILLKNNISIIISDESMDVIDLYDDNNNEVAKKVNFSIFNPKFNLYMYQYKN
LINYLDKSICMGALSSGSTSVPKVLYRTYESWAGFFPIQNGIFNISGESILFVNGTLSFTGNLNSIMSVL
YEGGSIVISSGLNCKSWIRTIKQYNVTNIYLIPTKLQLLVKHLKEPVLKVVSIFTGSQLLFEYTARNLKK
YMPKSEIILYYGASELNYITYLCYDELIEKPLSVGRPFPGIDIYIRGGKIFVNTEYAVYNATKPYSVNDI
GYYDNDGYLIFEGRSDDIVNIGGFKVSSAKIENEVKKIPQIEDAIVLPYSDTIRGNQIVLFVITIDKITK
KDLLIKMKDNLMKNEIPKKIIFLNSFPYTSSEKIDRLALLKML
>gi|260688150|ref|YP_003219284.1| putative thiolase [Clostridium difficile R20291]
MKEVFILGGLRSHIGLKNGIFQFVQPELLGASVLKDLIKKYEIDKIDEIICGNAVGTGGNIARLMTLTAG
VSNEVPAFTVDMQCASAMMSIDIAFSKVKSGQCNLIIAGGFESSSLQPMRTYHKNDKRYNTNNPNYTVAQ
FSPDDNSQNSMLEGAERVAELYQIERADLDFWVKESHKRAKEAREEKILEDIISPINNSTYDEGIRDKMS
QRLLDRMPPILGKETITNAANSCLINDGASFIIICSKKYLEHVKKKPKTKIINTCTIGTDATLSPTSAIQ
AMDKLLEIESLNYLDVSAVEFNEAFAVIDVLFQRKYPELIERYNIFGGALAYGHPYGASGAIITLHLLKA
LEKTKGRYGICSIAAAGGLGSALLLERV
>gi|260688151|ref|YP_003219285.1| putative biotin synthase [Clostridium difficile R20291]
MKGIIKMKNTKVNIQDLTKMSICVALLCISSYIYIPLPFTPAGVTAQTIMINLIALILTPRQAFSTVGVY
IMIGLIGIPVFGGGTSGIGKLLSPTGGFYFGFLFAALIISLLKGRNNDIKRYILITIFVGMPIIYFMGTV
FMCYFNQMTVEAALFAAVVPFLIGDTIKSVIASFLGTKLNNVLRRNL
>gi|260688152|ref|YP_003219286.1| hypothetical protein CDR20291_2807 [Clostridium difficile R20291]
MKVNENNINNIDEELDELSRKVYLESPDFWISISDKIIDKVFDEMLLFFAVKYNYFNIVCFAIENNYLDL
NMPSKNKKYTNIMEHLLDTSKQNEDKKIYNYLLSLNKGNNLDERPILDELNCNISSDTFEKKDIYLPKYL
CPSCNSNIFDTGYKVSNDITYKFSSKEAEPIEMSSEVSSIRCCNCDELLEDITLNKLYNLCKIQNCNNCG
SNLTKVGIIAKKKMNFDENTEKFKDVSTSYCCGNCDSEINLSQREHFKI
>gi|260688153|ref|YP_003219287.1| putative acetyltransferase [Clostridium difficile R20291]
MIKKLNNKDINKIMEIWEKSTIKAHDFISKEYWQNNYNTVKNEYIPISDTFVYDDGDEIKGFISIIDKSF
IGALFIEPKYQNLGIGGKLLDYATKKYKSLSLAVYKDNKKAVVFYNKKGFNIVKEQVNEDSGFKEYIMEY
SK
>gi|260688154|ref|YP_003219288.1| hypothetical protein CDR20291_2810 [Clostridium difficile R20291]
MVVSMFVIVTYDIVEARSLNRIRRILRKYLTWTQNSVFEGNITDGKLHKCISEIENIIDNSEDSIYVYEI
KNPNSIKKKCYGIDKYSDEMFI
>gi|260688155|ref|YP_003219289.1| hypothetical protein CDR20291_2811 [Clostridium difficile R20291]
MYKDYYIISNGNIKRKENTIYYYNLEGEKKILPVEQVDDIHIYGEVDLNTKLINYISKYGVMLHFYNYYG
YYSGTYYPRKKNVSGFSLVCQSACYLDKNERLYLAKSFVESASYHILRNMRYYKVDESLIDTIKDELNDL
NDVKEISELMGKEGRIRKTYYKSFNQILKDDFEFYKREKRPPKDPVNTLMSFGNSIMYTNVLSEIYKTQL
DPTISFLHEPSTKRFSLSLDIAEIFKPIIVDTIIFSLINNKRINKNDFEYQDKICYLSEKGKKKFLQEFE
NKMQTTIKHRNLNRKVSYRMFIRLECYKLIKHFINDERYKVLKVWW
>gi|260688156|ref|YP_003219290.1| hypothetical protein CDR20291_2812 [Clostridium difficile R20291]
MWLKFTKEGDFVPIDLEVLKVQGVKINYYYVCKRKLWLFSKGITMEQNSSRVLSGKIVHEDSYKRMKNKE
MLIDDILKLDIIKDEYVKEVKISSKMKEADEMQLYYYLYYLKNSMGIEKKGTINYVKEKKQEELILTEEK
EKIIENTLININEINMQLSPPKIEKKHYCTKCAYYEFCFVKEE
>gi|260688157|ref|YP_003219291.1| hypothetical protein CDR20291_2813 [Clostridium difficile R20291]
MLYAKSNPVETLREHTDELLKQMNVLRESYGKNINSLDFLEEEIFWQLLDFVIEFHDIGKAFSPFQELIK
SRMDTKINEPKIVTHLENNVGHNYLSPAFIDYSYIDRKKNKELRAVLNQVIVYHHERDIFIDKDFKNLIQ
KILDEDLINKVYELQREFKVRYPIKTEKLSKVYLQSVEKRIDKNHKYYNLYIMLKGILHRLDHSASAHEV
VECNNVINIGEQTENYLMKEFGSLREAQSFAKSNRNKNIILIASTGMGKTETALIWIDKDKAFFTLPLRV
SINALFDRAKNIIGVGEANDTFLGLLHSTAIDYLEESNQENSSEIVDLAKLLSCKLTFSTIDQIFKFPFL
YRGYEKVYSTLAYSKVVIDEIQAYSPEIAAVLVKGIEMIHKIGGRFMIMTATMPTIYIDELKKRGVMNSN
LADLTCNTEKIRHCVSIVENSIDENLGKIIQSGMNKKVLVIVNTVKSAVEKYELIEEIVKPKGIDVNLNL
LHSMYIQEDRAKLEKYIKEFADSDSNGIWITTQLVEASLDIDFDELHTENSTLDSLFQRFGRCYRSREYE
ENSPNIFIYTEKATGIGSIYDKDIVEKGLELLKTFINGKECVKMKEKYKVEMVKILYSKESLEGTAFEKR
FTSALNILDTITPYSLGSKDAQNILRNIEGYTVIPEDIYNKIEETLIKDYEELGQELINAYSNDDRQLIN
KIKSKRKKARREIIKKTVNLPIYKAKQNVIDIQVKGLEDLKILLYKYDIHENKHTKQIFGKGVLISNEID
QFI
>gi|260688158|ref|YP_003219292.1| hypothetical protein CDR20291_2814 [Clostridium difficile R20291]
MKVLKLDLFQETACYKKPFAMKITETYPLPPYSTINGLIHKILNATEYIPFNISVQGTYESIFNNYQTTY
FYKKDSITSMPMNSHMLLNVNLIIHIGGDFDLLEEIYDSLLNYDEHLSLGRKEDLVRINDIRFVEVNKFE
VDEDIQLDDYENYKLSECNIRMPIYIPKTSLQDTDIDGISYRLNNYYDNNAVEDKKRVWNKVDSYYVEDG
NTISIGDILLDNEGDLLYFNNIN
>gi|260688159|ref|YP_003219293.1| hypothetical protein CDR20291_2815 [Clostridium difficile R20291]
MKRGLTFTVIAQAQSLNYGEGIGNISELKKLSRDDGNIYTFASRQCLRYDIVRLAAELFNWNLQVVDKEK
GTIQFKDNISIRESEEMDLFGYMKTNKKDEKDKKGGSLTREATVRLSNAISLEPYRSDMDFLNNKGLADR
IGEHPNLANIEQHLSYYTYTVTIDLSKIGKDGDIELDNKEKCRRVVEFLEIIKVLNRNIRGRQENLSPLF
VVGGVYEIANPFFLGRIKLKGDKNGFKINKQAIEEVIQGTFLGKDLKEFTYVGMVDGVFINKEEFKGLFE
DNFLSVDKFFGQLVKEVKEYYGVN
>gi|260688160|ref|YP_003219294.1| hypothetical protein CDR20291_2816 [Clostridium difficile R20291]
MKLRVYRGDWFFNMGIVGFLNIIKKADKQAEIFIMEDYIEFDSLFLENFHEYYFNYFMDEYDVSKRIKKN
IDYSINFIKSKPDRIKDGIKKIKDSVKQQNDKIKKFDEEKFNLIKEKLDSMSKIKSYDEFDSLEALVDET
IDIFKIKSINDRLTANLYKYVVQDNYFGQVSFFNVAKAKLDLDGLKQIMFNDYLRQIIYFGELADLLEEN
DYDKLKNYLNDRLNSIAKDINEKKVSKSSINTIEKIMKEINKNFIKKNKSIEDIKEYMDSLEVCEMCGLY
KGILDEYSESNFAPLGVSTNNARNMFWNQAYVPSICDICKLILFCTPAGATYTRKNYLINEENEFYLFVN
MDTSINELFERNNSLKAQKSEYSDSKDENPFNQLIKSIVEENTLKSEWQLRNILFVEFKASIDSKKCKIN
YFNIPTYLAKFFTDKYANKKIQSIYDYKLKSNVLDLLLKNRDLKHLTNNILRNKVKNDMESNNKSNISGI
DCFRVVQLRALINSYKKGVYKMDSKNLEKNDEKLRIIYYLGCDIHDYFVNKNSKNKIDGVSYKLLNSVKV
GNKSDFMDTIIRVFMSAEKQIPAFILDIEIEKDLDFESIGHAFISGLISGKYEGKDKLPNEKEEK
>gi|260688161|ref|YP_003219295.1| hypothetical protein CDR20291_2817 [Clostridium difficile R20291]
MKMKIEFSTGCIPISYNSLFMSIIKEAIRKSNEDYYKNMYYYKEKNNKKTKNFTFSVYIKKYSIEGDNFI
IEDKVILNISTPDLELGFHIYNGLMTSKKCLYKAYELTRIRIDLSREKKVTEERVLFNALSPICVKSKEG
KFLEITDDRYIEELNYITNEVVKNYRGNGLKRKLEFENIGLKKIVVKESLREFKKITGKEYQYINGYKGK
FILKGDIDDLNLIYNLGIGFRRAQGFGDVDILEWR
>gi|260688162|ref|YP_003219296.1| hypothetical protein CDR20291_2818 [Clostridium difficile R20291]
MMILIQSRGKMKCKELSEELEVSERQIKSYKMYLEQAGIFINSTPGIYGGYEIDKCNSISLIKLLDSEVS
ILDMINSQLEYNNDIYKNEFNNIVEKIKAVLNTGEKSDTYMDYFTVQAQRNCDYKSEKNKCNEIIRAYTT
KHKFWIEYYSLNSGNSERIVHPYGLFNYKSDTYMVAFCEKRFKFIDFKLCRIKDYKVLEEKYNVDKSFSW
DEYSKNSIGIYKGEEINVVIKISHPFSIIIKEKVWVNNQQIIEYDDKSIMFKAKMRGYEEIKSWILSMGA
YVEVVEPDRLRNDILSEIEKMKKIY
>gi|260688163|ref|YP_003219297.1| ABC transporter, permease protein [Clostridium difficile R20291]
MNIKQFAINNISRNIKAYLGYLASIVISSSLLFSFIMFTSHPDLDVSQFPDYLKEGLKMSKIIAYLFLFF
FVFYSVSVFLKSRYKEFGILYITGISKRQVMKLIFIENMIINIVSSVIGIIIGLIFAKIFLVVMSTFLEL
SPLKFYIPFNAILSTLIYFMILAVLTSIFTYFIVKENQVLKLLKGTKTPKPEPKTSLMLAILSICLFIIA
YYNAITSTDQYTTYLRLVPVTSLTIVATYLFFSQFSVFFMKKLKLNKRFYRKNTNMLWISNLIYKVKDNA
RIFFLITITSAVAFTAIGTVYSFWKDVERQINLIYPNTIYYSTMTLHNDPKKPDSKEKDKERMMFIENNL
KKENVDYTRTNGEFKTVFPKKSDFNVRIMKESKYLEITETIGVKPISFEDNECISLLSSSLPGNNNVKEN
IIVGNRGLKVAKQVEECVMPAYYKNMYVVKDNFYDSIESKFIVDRFTAFEVEDSSKTIEICREFENKFNN
ESGMQPYLFFSKELMIGTGKLIYSTFIFLAIFIGLIFFVTTSSFLYNKFYMDCQVDKKKYEQLNKLGMTY
NEIKKASTIEIGIVFLFPYVVAVIHSIFALTALKNSFDIEVASSAVLVMGSLFLVQIVYFLIVRNNYLKE
IRLNLVNF
>gi|260688164|ref|YP_003219298.1| ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MKILTVNNLSKVYGKKIIFNALNDINFSIEDGEFVGIMGPSGSGKTTLLNMISTIDKPTTGTMELKGKNP
LLLRGEELALFRRRELGFVFQDFNLLDTLTIGENIVLPLTLDKVSVKEQDERLNEVSTILGIKDLLGKRT
FEVSGGQAQRTAIARALINNPSILLADEPTGNLDSKSSKVVMELFQKINKENKVTTMMVTHDPLAASYCS
RILFIKDGSIYNEIYKGSSREQFYQEIMDVLTLLGGDN
>gi|260688165|ref|YP_003219299.1| undecaprenyl-diphosphatase [Clostridium difficile R20291]
MSLDVIFILKSVIIAIVEGFTEFIPVSSTGHMILVGNLIDFKGQFAEMFEVVIQLGAILAVVVLYWKKIK
DSVIEFFKFIFTGGKEGKIGFRFGMNVIIGCIPFAIIGVLFYDNIKSLFNLQSVIIGFIVGGILLLVVET
LFRKKNHSTDNIDKITPIQALKVGTLQVLSAWPGMSRSASTIMGGWIAGLNSPTAAEFSFFLAVPAMVAS
SGKDLFEFDYSIMTPTLWIALVVGFIVAFIVSIIVMEKFVNFLKKKPMRVFAVYRIIMGVVLAVLAFTNI
ISV
>gi|260688166|ref|YP_003219300.1| two-component system histidine kinase [Clostridium difficile R20291]
MKLFLKDYKGYIFIYYIGIVMTIIYCNLMKFISFGESLYILLFSSFILLCFLIYKYYKNREVYNLFEKGI
HSLEESFLYLGSSFLGRNISVILKQQHKLYQSMIQEHKKIHSEHLTFINQWIHQMKTPISVISLQLQDYE
GEEVTENIRKEIDRLNKGLDMAMHFARADNFQKDFIVEKAKLNEIVSSIVNEEKRLFIKSGMIPKIQVDK
FTYVYTDVKWMKFIIGQLITNGVKYSKDYSNYLTIKSEENNKYVILSIIDEGIGIVSKDLKRVFDPFFTG
ENGRKFGESTGMGLYLVKKVCDDLGHKVSIKSEVGKGTEVSIYFNKDVNSLIKM
>gi|260688167|ref|YP_003219301.1| two-component system esponse regulator [Clostridium difficile R20291]
MSYKVYIVEDDISISTLLKDYIEKYGFEVIVEENFDDIMITFESFKPHLVLLDVNLPKFDGFYWCRCIRQ
QSNLPIIFISARDGNVDQIRALESGADDYITKPFYYDVVMAKIKSHIRRVYGEYSPKIDERIVELDGLKF
YPERLELELNGENLIITKKEGILIECLIKRYPKVVSRDYLLEKIWDDIEFVEENTLNVNVSRIRKRFEEL
GIDNAVQTVRGLGYKLNKNW
>gi|260688168|ref|YP_003219302.1| ABC transporter, substrate-binding protein [Clostridium difficile R20291]
MKLKKLLIGITILTLATASLAGCAKKNNGEKLSEINLTYVKSPLNVPSIIQKQDDLFGKEFKKDNIKVNF
HEITTGPEQTQALAAGEIDFLHALGGTSALIAASNGVELKILNTYSRSPKGFMILTNNNSIKSAADLVGK
KVAGPKGTILHQVLISALDKEGLSMDDVEFVNMGIPEASAALSDGSVDVALIAGPAALKAMKSGSKLVAN
GEGLVDGIIVTAVSTDFAEKHPEIVERFMKVEKETLEYVNNNFDEAMEKVAKEVDLSLEETKELYAWYDF
SLDITDKDISSLEDTQDFLIKNKLQEKKVNIKELIYNAK
>gi|260688169|ref|YP_003219303.1| ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MNNLVCDSGYIIRNLYKSYKVDNEEHVVLSDISLNIDRNHITVILGESGCGKTTLLRAIASLEGINSGEI
RFINDNKEYRPNVGFVFQESRLMPWLNVSENIAFHNQRKNTILNKVLRKFKHNKRIIGKIINDNFRSLET
NDNLNKSNKYNRKSNIDVEKYLKMMNLQKFKNSYPNELSGGMAQRVSIARALSFNPDMLLMDEPFSALDY
FTRIDMQNEVIKIHKSTNKGVIFVTHDIDEALKIGKKIVVFTDERKIKEFNIEDGYNRDLTSEYYIKLKK
DILMTMKSNKDI
>gi|260688170|ref|YP_003219304.1| putative ABC transporter, permease protein [Clostridium difficile R20291]
MVNKFNNKFLRLVKSVLIFFIILLLWKITNYLGIWSDYILPSPEKVYSTFLNMISDGSIFINVYASMKRV
LIGFAINTAIGVPLGIFFGIYSGVYEYFKSLINFLRNTPPLALIPMLILWFGIGEESKIIIIVLASFFPI
FTSTLKGIKNCDSKLIEVGRVFEFSKLQIIFKIIIPNAILDIAVGLKLALGYSFRAIIGAELVAASSGLG
YLISDGKEMSRTDVVIVGIIVIGLLGIITDYIFSIIVKKVSKGKMVEAYE
>gi|260688171|ref|YP_003219305.1| hypothetical protein CDR20291_2827 [Clostridium difficile R20291]
MNKYLLINPVAERMYGEKFHLIKANLIKKGYIIAECEPQLEYVKKQYKEYTKKTENTMLDCRCPESISLL
KRNNLINNFEVPMIEPILVRTCRVLYDKYIKSKDDMLVVTCPCTQLRDFASEKFKDKGNAMFYTWKEFAE
QEGVKSLGKIDESPIPLGYFKDTFEKVLEVSSEDEILSEIQKIRNGFEDKYDIVEMFYCKDGCNNGDGL
>gi|260688172|ref|YP_003219306.1| hypothetical protein CDR20291_2828 [Clostridium difficile R20291]
MKYEWRKRDKELYLPKKNPVIIEIPEQKFIMLKGSGDPNSKEFIEAIGVLYSLAYAIKTMPKKGIVPEGY
FDYTVFPLEGIWDKGEKSKGLDVLIKEDLIYTIMIRQPDFVTQDLLDKATDIVKKKKPHNLLEKVRFGSI
NEGLCVQMLHIGSYDNEPESFDIMNEFCKKNKLIRKSYTHREIYISDARKVSPESLKTVLRFEVEREV
>gi|260688173|ref|YP_003219307.1| ribonucleoside-diphosphate reductase beta chain [Clostridium difficile R20291]
MTFNLHKIHNAVNWNREEDGFTQAFWEQNVKQFWLPEEISVSKDIKVWNELSNKEKELYKKVLGGLTLLD
TKQGNNGIPSMMSLTENLQRKAVLSFMGTMEEIHAKSYSSIFMTLLSNLEIDELFEWIETEPTLQRKADL
VLAQYENTTNQEGLYLSMVTSVFLESFLFYSGFFYPLYLSGQGKMVASGEIISLILRDESLHGKYIGLLA
QEIYDSFDKMDKKMLEEKMYSILYSLMENEIEYTNVIYRESGLEKEVVNFLKYNANRALENLGFEKLYTV
DAINPIVLNGLSTETKTHDFFSTKGNGYQKGVYEELEDEDFII
>gi|260688174|ref|YP_003219308.1| ribonucleoside-diphosphate reductase alpha chain [Clostridium difficile R20291]
MNWIELNNQVIIKNEQGKYQLEKDKEALSSYIEEFIQPKLRKFNNLEERLKYLIDEGYYLKEVINQYSID
VIKNIYDMIDKHKFEFQSYMSANKFYQNYALKSNDGKEILETYNDKVLIVALTLGNGDKDLALNLADKIV
KQEFQPATPTFLNAGRKRAGEMVSCFLLSVEDSTEGISYAISSSNHLSKIGGGVALNLSKLRASGESIKD
IEGAAGGVVGVAKMLEQSFSYFNQMGARQGSGAVYLTVFHPDFELLMDTKKINADEKIRLATLSLGAIIP
DKFMELAEKNEVAYAFYPHTVYKKYGVSLDEIEMDEWYDKLVNDSDIRKKEINPRQMLTKIAQMQQESGY
PYVVYIDTANREHTLKDVGIIKMSNLCCEIFQYQTPSEIEGYGGKNEWGQDISCNLGSLNIANVMDNKTI
ESTVETAIRALSFVADSTDIKPVPTVSNSNSKSHSIGLGAMNLHGYLVRENILYTSDDAIDFSNVFFAMV
RYYSIKASMKIAIERNQTFEGFDKSEYVKGRNSKVLSKYYEQSYLPKSEKVRALFEGIYIPTKEDWTKLL
DEVKEKGIYNAYLMAVAPTQSISYVQNATSSIMPITEPVEVRTYGDSTTIYPMPFLTNDNMLYYQSAYRM
DMRKVIDLVATVQNHVDQGISTTLFVTDEKTTRDIARHYIYAYKKGLKSLYYTRTKMTRDTHECLVCSV
>gi|260688175|ref|YP_003219309.1| hypothetical protein CDR20291_2831 [Clostridium difficile R20291]
MKVILMKTISKQELEKTLEKHYLWLKNNNAGEKADLKELRLENMDLRGYCLSNIDFSWSDLINLNLEKAD
LENSIFNNSYLSDCSLKNSILKNADLSGANFRFCDLSNSDIRGANLENSNLEHATLNGVISDESTPFFKL
YCPETGAFIGYKKCFNFRMVQLLIPSDAKRVSATSNACRCDKAKVLSITSIDGKESFKSARAYADENFIY
RVGETIVAEDFNENRWKESTTGIHFFLTREEAIGYL
>gi|260688176|ref|YP_003219310.1| putative iron ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MLKTNNLSVGYNNKVVISNINVEVKNGEILCLLGSNGAGKTTLLRSLSKLISPIKGEIYLNGVNINCISR
KALSKKMALVLTNRLLGDLMTVQDIVNIGRYPYTGFFGSLSKKDLIMVDEALESVDALHLKKRYFDELSD
GEKQKVLVARALVQEPEIIILDEPTTHLDIKHRLELINILKKLSKEKSISVILSLHEIDIALKSCDKVAL
IKNNKVIAYGQPEDVVDEDIINSLYELDDKNFNSLLGSVEISNKSKNEVFIIGGGGKATPIYRAFTKKGI
GLYSGIIHENDIDYEIGRTMGIKMFTENPFEPISDESFDLAIRNLNDSKIIIDTGFSVGETNKRNIDIIK
EALKLDKKVYSFRNRDESKKYYDSLDSKIEHIDKVSQIINSADINNLL
>gi|260688177|ref|YP_003219311.1| transposase-like protein b [Clostridium difficile R20291]
MVVVEKAYKFRMYPNKKQQELINKTFGCCRFVYNKYLAKRIDVYKNNKETFTYKQCSSDLNNLKKELKWL
KEPDKFSLQNALKDLDNAYKKFFKEKVGFPKFKSKKINRFSYKTNFTNGNIMYCGQHIKLPKLGMVKIRD
KQVPKGRILNATISKEPSGRYYVSLCCTDVDIEAFENTNNHIGLDLGIKEFCISSCGEFIENPKYLKKSL
NKLAKLQRELSRKTIGSLNRNKARLKVARLQEHIANQRNDFLQKLSTKLIKENDIICIEDLQVKNMIKNR
RLSRLISDVSWSEFVRQLEYKANWYGRKIVKVGKFFASSQICNKCGYKNEEVKDLNIREWICPSCNETHN
RDINASINILKEGLRLITIQNK
>gi|260688178|ref|YP_003219312.1| putative iron ABC transporter, substrate-binding protein [Clostridium difficile R20291]
MKFKSNVLKQFFLIAMVIFMVGGLIGCSKSDKENKQASTGKKLELKYASGFSVEDLEDGIKKVTDGDNRE
LILIPKKIKIPEKYKNANIVRTPVDNVLIASTTQACSLRTIDELDSIKAVTTEEQYWTIKEIKDLMKDGK
IHYVGSNLAPDYEKIVDLNPDLTIVSSGLSEADTKFIDKLKELGLNYVVDNEYKEQNPFGRMEWTSLIAA
FYDKEDMATSELNKTVQKVEEVSKKIKNKAKPKVVWASVYEGSAYIAPKDSYVDNMIKMAGGINACASID
SNEGRVSIEQLHEVAKDADIFVYSSSSDYAPNLDSIKSSAPVLADLDVVKNGNLWVFAPDYYQSVDKTDE
LIVDLVEMFHPGTTGEKIKHYINYDK
>gi|260688179|ref|YP_003219313.1| putative dihydrodipicolinate synthase [Clostridium difficile R20291]
MKAEFLTPVVTIFDEEGNLDKEGNKKVYDHLIDGGVDGLVIMGSTGEFFNMSMDMQKELIDLVTSHVNKR
VKVFIGTSRMCINESIELSNYAHNSGADGVMIISPYYFSLDDDSIELFYSEIAKNTEAEIYLYNYPDRTG
YDLSPELTLRLARKHKNIVGYKDTVTLMGHTRDLINTMKIEFPEFKVYSGYDENFIHNLMSGGAGCIGGL
SNLIPEVCSKWAEAYNNRDMEKVIEIQKYINKAMDFYLITNPFIPAMKKAMNIRGLQISDYMTAPFVKPN
EKQVCEIKKLMNKLNIC
>gi|260688180|ref|YP_003219314.1| putative isomerase/hydrolase [Clostridium difficile R20291]
MKFVSFTEGENECKRTGVFSKDELFIIDVNSLNLSRNFKDLNELIQNVSSEDIIKLKTIINESIFYNYDV
FKRERCTVHVPIEKPIHDILCVGVNYKDHLEETQTHFDDSFEEPQKTVYFTKRVTKAIGPEDEIDGHFEI
NNQLDYEVELGVVIGKTGVNIRKEEVEDYIFGYTVINDISARKLQKEHVQWFRGKGLDTFTSLGPCILHK
SAVPFPIKLKVCSRVNGEERQSSNTGLFISDVSDIVSELSKGMTLEAGDIIATGTPSGVGMGFSPPRYMS
SGDVVECEIESIGILKNYIK
>gi|260688181|ref|YP_003219315.1| putative carbohydrate hydrolase [Clostridium difficile R20291]
MKFYGYKRPDGRVGIRNHILILPTSVCASDTTRIIASQVQGAVTFNNQNGCSQVHSDQQLTMDVMAGYAA
NPNVYGVIVVSLGCENCQNDLVVDAIKERTNKPIKTLVIQEEHGTLKTIEKAVRYAREMAQEASLLRKEE
FPISELILGTECGGSDPTSGLAANPLIGELSDKLVDLGATSILSETTEFIGAEHILARRAVNEEVKEKIL
HIVHRYENSLKLVGEEVREGNPSPGNIAGGLTSLEEKSLGCIHKGGHRQISEVYDYAKQIDKKGLVIMDT
PGNDASSVAGMVAGGAQIVVFSTGRGTPSGNPIAPVIKITGNKITFANMEDNMDFDASPVIYGPQTMEEL
TDDLLNMVVDVANGKQSKAESLGYTEMAIARVCNYV
>gi|260688182|ref|YP_003219316.1| putative carbohydrate hydrolase (N-terminus) [Clostridium difficile R20291]
MINAVIIDEKDNVAVAIEAIAKGNEISFKLKDKTVKTITALDNITIYHKLAIKDMAQGDKVTKYGEHIGE
ANQEIKSGQHVHIHNVRSVREDLDKQVMTNI
>gi|260688183|ref|YP_003219317.1| putative carbohydrate permease [Clostridium difficile R20291]
MIMDFIKKIPAGMMIVPMFIAAFINTFCPDIVQIGSFTTAVFSSVGSATIIGVQLVCLGTQLQFREMPKV
LKRGGILLGSKFAIGALIGILIGKLFGMDGVLGLTTLAVISAVTNSNGSIYLSLMTSYGDETDCATMSLL
TLNDGPFFTLIALGTSGLANVPLLSLLAAIVPILVGMIIGNFDKKMKEFLEPGCNLLVPFVGFALGSSIN
LASILKGGLSGVLLGLISVFVGGIFIVFCDKFIGKRPGYAGWAVATTAGNAIAVPAAVALVDPSWQPYVA
TATTQVAAAVVVTAILVPLITSWWAKKYGCPKFPKQNEDGTITA
>gi|260688184|ref|YP_003219318.1| IclR-family transcriptional regulator [Clostridium difficile R20291]
MTSDNHRPTARILDILEALAESENGYTLTEIADVINAPKSSIFPIVHTLNARKYITIDKNTSKYSIGIRS
YTLGSSFFEKRTIFNYIIDEMTNIVNSCSETCQLGILDNNEVLYIGKVDSPEPIRLISYVGKKIPANCTG
LGKALLCDFDKEKLISLYPDGLKGFTEKSITDFDVLYDQLLEVQRTQIASECEESMEHLKCLAVPIRKNG
CIRAAVSVTLPLFRANDEKIELIKKLLLNAQKNIQSMMEERNEDIVIN
>gi|260688185|ref|YP_003219319.1| putative alcohol dehydrogenase [Clostridium difficile R20291]
MSTYYVPPINLLGKGCLNEAKDSIKSLGTKKAFVVSDKFLVSNGTVKKVTDILSQIDVDFVVYDEVKQNP
TVTNVDKGLKILKSENCDFVITIGGGSPQDCGKAISILATNGGDIRDYEGINKTSKKCLPIVAITTTAGT
SAEVTINYVITDEDRHVKMIMVDTNSLATMTVNDPELMISKPSNLTAATGMDALTHAVEAVVANGAYDVT
DSTALYAIKQIFKYLPRAVKNGNDIEAREQMCYACFLNGIAFSNAGLGNVHAMAHQLGGLYDLPHGVCNA
MLLPIVEEENAKSAPAKFRPIAEVIGMDVNNKSDKECVDFVIDKIKALSEEVGIPKSLKDVGVDNPNFEL
LAENSMKDACAGANPVFFDKEKIIELFMKIS
>gi|260688186|ref|YP_003219320.1| hypothetical protein CDR20291_2843 [Clostridium difficile R20291]
MRGWICVKLTKLNIKKYRAPIYKYALANVNLRSAKSTNSSIITVIPQGAKMEVLDEEDDWIKVMYNSQEG
YVYKDLVSVSEYAWSNLNLREDKSITSNIITVIPEKSRVEVLQVDGDWSKIVYDDKIGYVFNYFLSTDGN
KPNELDYKYFYTDMIKFVNENNIKSTSDYLIVTDLRNKYTYIFKKDNGGWGQLYKWQCTIGKPETPTITG
IFYISGRKPSFGTDEYSVKYATRIKGGYYYHSVLYDSTGSYIIDGRLGEALSHGCIRLSTENAKWIYDNI
PDTTTVIIH
>gi|260688187|ref|YP_003219321.1| putative pyridine-nucleotide-disulfide oxidoreductase [Clostridium difficile R20291]
MKKTFDAIIIGFGKGGKTLAGDLANRGLKVALIEKSNKMYGGTCVNVACIPTKSLENSANSVKTKNINSW
DEVQAEYEKAIDKKETLITKLREANYNKLNSNENVTIFTGMGTFIDEKTVQVKTENEIYELVADNIFINT
GSRPFIPNIKGIENKNIVYDSESLMNLRVLPKKMTIIGAGFIGLEFAGIYSSFGAEVTILNSNNGILPNE
DVEDSEEIIKLLAKRNVKIVNNANIKEIKEVSESAIVEYEVDGKSKELTSNMILVATGRKANTEGLGLEN
AGIELNERGFIKVSETLKTNKEHIWAIGDINGGPQFTYISLDDYRIVINQLFGDKTRTTNDRKNIPNSIF
ISPAFSRVGLNVKQAKEKGYEVLVAKMPVEAIPRAKQIGKADGFIKIVIDKKSNKILGASMICENSSEII
HLIQLAVDLEVEYTYLRDRVYAHPTMTEALNDILSPNMIKEV
>gi|260688188|ref|YP_003219322.1| putative cytochrome C biogenesis protein [Clostridium difficile R20291]
MQNVNLFLVFIEGIVSFFSPCILPILPIYLSILSNSSVENLKEGKTSFIGSSLFKNTIFFALGISTTFFI
LGSSVKVLSMFFNENKDLIMFIGGIIIIIMGLFYMGIIKSSILNREKRFNVKFKEMKAITAFILGFTFSF
GWTPCIGPILASVLVMVSSSSNHLSANLLIAVYTIGFILPFIITAMFYSKLFKTIDKIKSNMEIIKKIGG
IILIVSGILMMVNGFGSISKHFNTSQNSKIESKQEENKRENSTDKEENSDGNNSQKDSNNDNNDNGSNDE
DRIKSIDFTLTDQYGKTHKLSDYEGKVVFLNFWATWCPPCKEEMPYIEQLYKDYNKNNDDVVILGVASPN
LGREGSREHVVNFLKDQGYTFPVVLDEDGALAYQYGINAFPTTFIIDKEGYVTQYIPGAMDKATMASFIE
NQRNK
>gi|260688189|ref|YP_003219323.1| putative transcriptional regulator [Clostridium difficile R20291]
MYNIDDMIYNCPVEALSNILGKKWVAIIIWKIQEDKKRFGELQRAIPDCSKKMLVQQLDFLIEQGIIVNQ
KKLVNNVVESTYFLSESGLRLLPVMEKMIMWSNKNLNCDKY
>gi|260688190|ref|YP_003219324.1| putative glycosyl hydrolase [Clostridium difficile R20291]
MIKAHIVNHTHWDREWYFTSGDALVLSEQLFTDVIDELERNPDVSFVLDGQLSILDDYVQLHKEKIEIIK
KLIKEDRLHIGPWFTQTDAFFARGESILRNLMIGIFESKKYGKYMKIGYLPDTFGFNAQMPILLKHVGLD
NIFFWRGIHLGKHVQSPYFKWKSLNGESYIYAVNMPHGYGTGMLLEPSLKYVNGRLDPAIDFIKSYTDVD
EVLIPSGNDQLNIIGDFKNKIKAINDIGKYSYITSSYQEFLKYIKSIESLESYRGEFREPVLARIHKSIG
SSRMDIKLACDKLENKLIKRIEPLLVIAKKSKIEISNQLLINTWKKLLEGQAHDSLAGCVTDTVTDYILH
RIREANEICDSIENTIVKKISEGLKLSKNDILVFNTEAKRFNGYKEIQVVSDSKNIYFKDNLDATIIEET
YVKPRENVLEETPAGNVFIEESGYYILKVRINVQLPALGYKVVSFESSDKEMVSLDKSNDTFISNDNYKI
IYEDGSLNLQLKDGTYISNFLILKDSGNAGDTYDFSPLKNDEDIKLSFDRVYTEKTLGYEKLVVKGTTLL
PLTLEDRKNKYLNGKLNVKVSIVLSKENPLMDVKLCVDNTIYNHRLRVHIKTDIKDNKNIASLPFGYITR
ENGVLDNWEDIYSEMPIDLEPLESNITLTNQNRSCTVFTRGIKEYQHIEDEIALTLLATTDELGKPDLLY
RPGRASGDTTKKGHIRIKTDKAQMLKKLEFSFAIYMDSKSFDELEIANLTHNYLRECVNYQLQDYNFFLY
RIDNKIQKSIVNKTVSRELEIISLPEKYLISACYPSYYSKDKFIIRVENPSSNRMILDEQIFKNRNGKIV
NAIEDVEEEQVYEIAPFDVISILLDL
>gi|260688191|ref|YP_003219325.1| PTS system, IIc component [Clostridium difficile R20291]
MEGNVMLKKIVSELKKHVLTGISYMIPLVIAGAMIMAISRVGGSFYNIPDIWDAKYAESASSIVRLLHDL
DGFGGTALGLMFPVIAAFIGFSIADKLAIVPGLVGGMIAKDIGAGFLGALAVGLIAGYTCLFIKNHVKLP
KSAASIVPIFIVPVFGTLITVVLINYVIGIPFATLNTGLENWLNGLSGTNQILMAAIIGAMMAVDLGGPV
NKAALTTSLALLTSGIYAPNTAAMVGIVIPPLGLGLATILAKQKYNKQLREAGKSSLIMGLIGVSEGAIP
FAVESPLKVIPSCVIGTAIASAMAVGLGSVNATPISGFYGWFTVENWPMYVLSIAVGTVIVAGLVIVLRG
NPVIEDDEFEDDDFDEAEWES
>gi|260688192|ref|YP_003219326.1| PTS system, IIb component [Clostridium difficile R20291]
MKRKIIAVTACATGVAHTYMAAQALKKASKKMGHLIKVETQGATGIDNELTTKDAQIAEVVIFAVDTKVR
NAERFEGKEILEVPVNAPIKDAEKVINDALKLIDTK
>gi|260688193|ref|YP_003219327.1| PTS system, IIa component [Clostridium difficile R20291]
MKISDVLKKEQIVFNLDTNTKEETIKKLSSIFVENGIVDNEEEYVKSVLEREEHSTTGIGNGIAIPHGKS
DAVKKSSIIFAKTKHKIEWDALDEKPVDSIFLLAISNIDKDSNHLVLLSKLATKLMDDDNVDALKLANSE
QEIINIFSEEGEM
>gi|260688194|ref|YP_003219328.1| putative transcriptional antiterminator [Clostridium difficile R20291]
MLTDMIQNREIKIIKFLLKEGHTTVKAIADDLDVSEKTVSKSLKEVEAVLKKIGLSLIRKPKIGVYIDGD
LKKILPYLDNKGSQIPTTREERVIYIYSVLLKSNDYITIQQLSDELYISRGTIERDLSEVEKLLKNEGIS
IYKKPSKGIKLNISERDKRQLTAKFIHKFWSRNWYIKQEQESFYQAFEKIQADVNGIFSEDDLSIIIDIL
RNFSRERKFEFSDYEFQSLVIHLAIAVERIRKGEYIEESLYIGNIENNQMSNTNYLAKQLEEKFSILLPK
SEIGYINLHLVAADQHRDTNELKNTSTNPCETSTNNISNLREIIKNTLYETAYDKDLIDGLTSHVHSSIN
RLKYGLSIKNPYVNTIKQNFSLSFEQALDLKKVIEFIYDIRINDDECAYIALHFEAFRERMKELPQNIRV
ILVCSTGLGSSRLLSARIKKYFPMIKIEKVLSVQELVSSKIDADLVISTIYLELETIPTIVVSPILNESD
IRTLERNIQNVSCCTSKKYKSFRNLIFEENILLNIEASNYEDAIKYITDNLIKKGFVKEGIAKSAIEREN
LSYTSFQSIATPHANPSYIKKSNISVATLKNPITWGNEKVEVIFFISLENDKNLELDEIYEVFYDFIDNK
KNINDILSATSTKEVYDLLLEESI
>gi|260688195|ref|YP_003219329.1| putative sugar uptake protein [Clostridium difficile R20291]
MKGNSLMLTIIIALLPVMGWGLMPIVANLKKSSPHEQLLGTSISAFIFSTIITLVIHPEITFFSFCISMI
SGIFWSLGQLMQFKAIQIASVSKVMPISNGSQLTFTTLLAVILFNEWTSSKMLLIGSLSILCIILGILLT
NYQTKKSTDKNMLKCVGVVLLSSLFLSLYVVTNQIFLIEGYRIILPQSVGMLITSSIIVKYFSKEIVYRE
NVLFNLITGILWSIANLGMFITTNTLGVTISFSISQSCVIVATLGGIIFFKEKKNKKEWLAIFIGIILIM
SGVFMLSIIK
>gi|260688196|ref|YP_003219330.1| hypothetical protein CDR20291_2854 [Clostridium difficile R20291]
MKTKEEYLKEVRNISEEYFRKGEFFCSEAVLQTINDALGQPLSPEITKLASGFPIGLGKAQCLCGAISGG
EMALGIVYGRVHGETMNPKMFEHAKGLHDYIKKEYGATCCRAITKKWDGDNFMSPERKEHCIKITGQVTE
WVADKLIEDEKLNIK
>gi|260688197|ref|YP_003219331.1| putative transporter [Clostridium difficile R20291]
MNLLKKYPIPIASLILSIFTLGNLLQSYSESLRNVIGFIGFILYAIYIVKIILLRKGVKEQLENPLISST
FPTITMATMIFATYIKPLSLELSIMIWSIGIVGHLVLIVLFSKKFLVKFSIKTVFPSWYIVYVGIVAASV
TAPAFNQLLIGKIAFWIGFVSYIVLIPVILKRVWIIKEMPEPSLPSIAILAAPGSLLLSGYINSFSDKNN
VVLYLLFILSIVFYIIVLGYLPKLLRLPFYPSFAAFTFPMAISAMGMKLMNGYLTKSGHFISWISYASKL
EEIIATVIILYVLVLFIIYLSKSETTSKAK
>gi|260688198|ref|YP_003219332.1| hypothetical protein CDR20291_2856 [Clostridium difficile R20291]
MIVSVSRRTDIPAFYSKWFFNRLKEGFVYVINPMNPKQVSKIELNPHTVDCFVFWTKDVTPMLYDLNKLK
DYKYYFHYTITSYGKEVETCILDKRKVIDSFKELSRKIGKERVILRYDPIFLSEKYTVDYHIKAFASLCN
QLDGFTEKCIISFIDLYKKTKFNTKALHIKPIEITEIETLSKEISKIAHKHGIILEMCSEEYNLSKFGIG
KSKCIDDRLISKIIGCEVEVKKDSTQRDICGCVKSVDIGQYNTCRHYCLYCYANFNYAKVEENCRLYKED
NKLLIDTLRDDAKISIRDMKTIKVDKNKQISIFD
>gi|260688199|ref|YP_003219333.1| hypothetical protein CDR20291_2857 [Clostridium difficile R20291]
MEGRTGIKDGRWINVVERGIKNDGSYNIGPDLQDIIDEIETDFCVLYFPKGKYLFTSGVKINKEIVLQGD
SNSPTETTQFITRGVENMSIITLTGKKQCIKNINFYSDSCEIQVNEEPPTKGNPKYHYEMIINKNEKNVE
MNNVSAILYDNSKNMIKGLGHYENIYISGFSGTGIRIPYYSIVNDITVSSCGLGIDTGIDTIISNSRISK
CQNGMRIRTGTSINNVRIEKIQKVGLISSQVKDYEGYGSYKINNITIDQCGYCGFLFDSVKGSYFSGIIR
RCGQYYYNTDYDTYLSIKDRVEEAYSLFYGNYFTECNIDLVSDNKDNWDDGLEYKHKVYVFKTLQIPKLT
LRCNIDAYDYIVKSVHGGGNLMLKNNFNNYIFIDSSSPEVINGINFNYQKNGNLLRLNNGKLSYKNGKEE
TAIFRPNYGLIVASTDSECEQIETSYGGKWEKLGSEVIGKETVYYYKHHEPDKTNQIK
>gi|260688200|ref|YP_003219334.1| hypothetical protein CDR20291_2858 [Clostridium difficile R20291]
MEESIIIKDISGWINVLDYGICNDETKDVSSKLQEIIDAAPEDSIIYFPKGKYLFESGVKIKKRLTLCGD
SYILANVPKNTAGVTQFTFKGKKNPKSENIAIITAKSVRHCIKSICFYSDSCDRDMTSNHEPPTDGKPRF
HHNVIINYRNISAIVCEDKQGEPGHYENLFFSGFSGIALDMPNNSTANDITVFTSGLGISTGENSTIANS
KVWGCVDGMIISTGTFINGMRVEEIKKVGIKNIGRGLNFITNITIDQCGYCGVWFDSISNVQISGNITRC
GQYYYDVSYDNYLMLDNRVKEAYSLFYGNLLESSNIVLSNTNKDNWEDFKEDKHKVYLVEALETKNVLLT
CNIDATDWIVKSEKGNLTYNNMRQTVIFYDGKLSSINGIGISDEDYGDKVKIKKGNIYINSKDKVIKMHK
PEVGDIMSTIIKDENILSAHYGGTWGKIGEKIEFGITVHYYKLIEK
>gi|260688201|ref|YP_003219335.1| hypothetical protein CDR20291_2859 [Clostridium difficile R20291]
MEIETKTPDWINVLELNSKIDITWKYDVSNMIQDIVSDKSLEGSIIYFPKGNYLFEKGIKISQQITLQGD
SYYGGDNQVSNLDKKQSIVGTTNFITRGVSNISIITLEGTSQCIKNINFYYDSHDIEKIPPKNVSAITEY
GETQGLFHFEHLFISGFSGIGIEIPYYSTGNDIIVSSCGLGMRLGEKSMLSSSKIYECKNGMEITTGVSL
NNVRIEEIREIGINNKGFGFNLIMNLMVDQCGYCGFMFEKMCYSQITARITKCGQYYKSVDYNTYENMED
RKEEAYSIFYGDILENCNIVLMNSNIDTLENDSLDEHKIYVIKANETNKVMLTCYAEADELIQCAKGNLL
LENGENTYKFYNGEICSVGGVQISDIDEKDLIKIIENTLYIDDKGKYLMVPRLKKNTVIYSVLDSIEEIN
KLHGGIWEQIDVKVLAGESMYYYKKIKD
>gi|260688202|ref|YP_003219336.1| putative iron-sulfur-binding protein [Clostridium difficile R20291]
MLFLSRGEELNMNDELKSILYNKGVDIVRFVDISEFPINQTQGFSKAILFCIGLSKKFITDIYNNLPTDS
DEFLEKEEKVEELADWISKYIQNKGYRAYSQSEKNNLEHGYFEKAYINPEMQSGISPLPHKTIANISGIG
FMGKNNLFVTEEYGCAFSMCTVLTDAPISVERYPLIDSKCLNCNVCVENCPAKAIHGNEWTLPGKRESII
DVSKCFCALRCMMSCPWSLRYANQK
>gi|260688203|ref|YP_003219337.1| hypothetical protein CDR20291_2861 [Clostridium difficile R20291]
MKIENLSIDDIKRGYIFNDDLNCYSCIKCTKTYEVGEIYKIGNRFFEASKAIELHMELEHSDYLEQLLNS
DSKYNTLTENQKQLFQLFISDLPDKEIAKQVGVSTSTIRHQKFIFREKAKQAKLYLALYESVFEDKSNKS
STIIPIHEHARMVDERYVVTEEERKHILDTSFESMNPLKLKVFSSKEKKKVVILSKILEQFERGKKYSEK
EVNQILESIYDDFATIRRYLIEYGFMSRNKECTKYWLT
>gi|260688204|ref|YP_003219338.1| PTS system, glucose-specific IIa component [Clostridium difficile R20291]
MFKMFKKKSIKSPISGKVIELSKIQDGVFSQKIMGEGVAIDSTGDIVYAPINGKIVVVAETKHAFVIELE
NGMELLIHVGLDTVNLKGEGFEALVSMGEQVKEGTPMLKINRPLIELKGISLITPVTITNHSEYNMNTCN
VGNSVEGGKDTVIEFK
>gi|260688205|ref|YP_003219339.1| putative phosphosugar isomerase [Clostridium difficile R20291]
MGYLKTMVDVMTTEMNAIRCLIDEAGIEYESIVSEIANCEGKVIFMGVGKSAHIGKKLAATFASTGTPSF
FVHATEAVHGDLGMIESKDITILISNSGNSMEVVNCIKYIKAIGSKTIAFTSNRNSVLAKECDYALIYPA
KDEADHLNLAPTTSSTITLVLGDSIACALSKSSNFGSSDFYKYHPGGSLGEKLKTANNG
>gi|260688206|ref|YP_003219340.1| putative bifunctional protein: repressor/cystathionine beta-lyase [Clostridium difficile R20291]
MINFDKKVDRLGTYCTQWDYVEDRFGKKDLLPFTISDMDLEFPFEITEVLQERLNHRVLGYSRWKHDDFR
NSVTNWYIKRFNCSVDSNWIYYSPSVMYSISKLIEMLSNEGDGILINTPAYNAFYDVITNNNRNIIKSHL
VNRNGFYSIDFNDFEKKCKKSKIFILCNPHNPTGRVWSELELVKMIGICKNNDVKIISDDIHMDIVYDNR
MTPILNVAKDYLDSVFICTSASKSFNIPALTGSYVIIPNEGIRNKFENITRYRDFVNSPAILAILATMVC
YDDCEYWLDELLKYLKENLKYTIDYIKDNLEPLKLVMPEGCYFAWIDFSELKISGEKFQKLLMDIGEVAI
MSGSVYGEEGEFYLRLNVACSREKLEDGLNRIKKTMDYIAKRTL
>gi|260688207|ref|YP_003219341.1| PTS system, maltose and glucose-specific IIbc component [Clostridium difficile R20291]
MKKNKLGLWNFFQMLGKTFMFPIALLSVSGMMLGLGAGFTDPKMIEMVPFLGNEYVNLVLNFMLTIGLFA
FNNLGALFAMAIPLGLLKKEKEFGAFSGLVGFIAMHIGTNFYLTRADLLVPAEQMSTNGQAMIMGIQTYN
TSVLGGIVAGLIVYAIYDKVSNLKIPESLGFYSGPRLVPIVSLIVMSIVGLLIPIVWPPFFNAFQSLGRW
ISSAGPLGYFSYAVAERVTIPFGLNHLVTSVFRFTPIGGTAVIDGETYFGTLNMFMAYVENNQIIPLDLA
GKMEQGKLMIQYGLAGAALAIYRTAKPENRKALKGLLISGVLTVIIGGISEPIEFLFLFISPALFAFHTF
MNGLANMVLPYLGVLMGFTGDLIAFISFGVLRGTATGWPIAVLVAVLYFAIYYFVFKWAIIKFNIKTPGR
EDKEIKVSEGNGSDFKNLSTYKGQQMISALGGQSNILSLDNCVTRLRLKLQDVSLINEDAIKEAGGIAVV
KLDEHTIQVIIGTQVYSLRKQMDKAMEGHLEACND
>gi|260688208|ref|YP_003219342.1| transcription antiterminator [Clostridium difficile R20291]
MNIKKIFNNNVVVSSLEDGTEIIVTGAGVGFKKKVGDLIDENLISKKYFVQDDQRDKYNQILNKTSIEYF
KISEEIIEKANEVLNTQVNDSIILALTSHIEFAVQREKQGIKLPNLILNETKQLYREEFKFGLWAIDEIE
KRIGIKLPEDEAGYIAIHIINGLENSQKDEGINILEFSKQVIQIIEEVHGFKLDVNSLNYTRLITHLKFF
VQRILRKETYNDSDIEDMYKLVNKNYNKPKVCTEEIAALVLDRFEYKISKEEELYLMIHINKITNSGC
>gi|260688209|ref|YP_003219343.1| putative aminotransferase [Clostridium difficile R20291]
MQFMDVSKYIEGANLKVKTKNGETVKRIYFNNSATPLVLKNVVDNLNCEIPWLTYINAPGIISEKNTLKY
ENVRSTILKLIDGDEEKDSAIYVKNATEGINFLAKFFKDENPDKFIITTAMEHMANYLPFKVNFPTKVVG
ITEKGELDLCQLENILKNYAGNVSLVTVTGASNVTGITTPIYEIARIAHKYGAKILVDIVQVIQHKPFSM
MPHECDEHIDFVVFSAHKCYSPLNGGALVGPKKFFEKFNPVLYGSGSTKFVNDNKILYANVPQRFEAGYP
EYFGTLAMGKALNTLNKIGLNRISKYERELFLYAKEEMSKIPNIIIYGDKSNNVIIPNISFNISNMYYKD
VAKYLVDNFGIETGAGVVGADIYVQKLLGISPKEAYVRFMRENPVGLVRISLGMYNTFDEVDSFIHAIKT
LAFK
>gi|260688210|ref|YP_003219344.1| thioredoxin [Clostridium difficile R20291]
MVKIINNNEFINEVENKDGLVVVDFFATWCGPCKMLSPIYEALGNEMVEKANFLKVDIDQSIELAQKFEV
STVPTMLIFKDGKPVDRLIGFMPKENLKNKIESYM
>gi|260688211|ref|YP_003219345.1| putative sugar-specific transcriptional regulator [Clostridium difficile R20291]
MDNIINELQNIGFTKYESQIYISLLKESPLTGYEISKLSGVPQSKVYENITKLLNNNIIINVGTDPIKYI
PINPNELLKNKKKEFDNSMDNLKNSLQILNKNKSVEYVLNIKGDKNILKKALEMIKNAKQEIIISCPYEE
ILELKKELLIAYKKNINIEILLLENKSLKGLDNIHTHGGNKTTLENKMLYKGIILIVDNDEILTGNLSEG
SEAISIWTKNSNILYIGVQYIKHEIYISEQIKGGYKNEQN
>gi|260688212|ref|YP_003219346.1| hypothetical protein CDR20291_2870 [Clostridium difficile R20291]
MNKIKIKQVDAFTTIPFGGNPAGVVTDASNISDEIKQNVAKEMNLSETAFVSESNVADFKVQFFTPGLEV
DLCGHATIGTFHALLEEGRLNTNKSIFYQETKAGVLSVELKEINNENIFMMEQNTPEFENLDNYRKELAQ
MIGVHEDRLLEYPIIKVNTGLWWLVFGLKSLDDLKNISPDLNKIKKFSGDNNIIGITPFCIETIDKKCDY
HLRSIAPYVGVTEDPVCGTGNACVSSYIVHHNILDKTSFIGEQGNFINRPGKVYVNITRENNDITSVKIG
GSAYTVLSGEIMY
>gi|260688213|ref|YP_003219347.1| proton-dependent oligopeptide transporter [Clostridium difficile R20291]
MSSTVKKKGKFPMGFYICSTTFSFERAAYYASKYLIYIFLTTAIVHGGLGIDKGQAAIMQANLVAFTYLA
PIIGGYISDRWIGARYTIPIGMLIMGVGYYLGSIATTVSMVNAMIILVSIGTAFFKGNVSAVNGQLFDSQ
EELDTAFSVQYSFVNIGSFIGTIAVGILYLKTFAKNGVLGFSQCFFIAAVLCVIGAIWFIYGWRFLGNAG
KRPFKEGVVAEKVEEKDKSPLTSMDKKRIWAIILISFFSVIFWVFWYLTYLAVYDYGAAFVNMNVGGFDV
PLAWFDSLNSLVCIVLGPVLGALWFKLASRPQGDMSLFKKTGLGLIFLGLAFLMLVGAEFSRGVGAPETA
KASILWIIMFGILLSLGEMLFSPLGNSFVSKYAPKKLLGVLMGVWTFATFIAGKGYGYIYAFTLKFDMIK
VYTIIPVILFVAAILLFLSDKTLSRLVEDDK
>gi|260688214|ref|YP_003219348.1| putative regulatory protein [Clostridium difficile R20291]
MVMFLFKIDDYIMYGMTGVCKVMDITNERFTNGIKKEYYVLSPIYSNNTVIKIPVDNEKVPMRKLLSKIN
VLSLINDIPNMDTSWIDNEKLRSEQFKKILRGGKCEELIKLVRSIDNNREYVKSIGKKTHQADDNIMKEA
ERLLSEEFATILDISPNEVSSYISSHIPQ
>gi|260688215|ref|YP_003219349.1| hypothetical protein CDR20291_2873 [Clostridium difficile R20291]
MENYFDKQAKELYNKASEIINTHSMLKANRANEKFDMDIPQDFKYEFFSLVDKVNLSLMEEEDNFYGYFL
FQMSREIRFDISSPTGVNFKGAKYVIYFNPIIFLTLDIKQMETTIKHEIHHILSMHLMRAKELKGKYSTL
AINMAMDIVVNKFLNNLPPYATTLEWVNLKYSLKLEPYEPFEYYVEKIQTELDLMEVDEDGEEDDSDKYG
DVEIDYSPERTHDIWDESNEIDKNTLREFTEKFINSSQKGKVPAYLESMISSLKNSKGELPWNLYLNRIM
GTVENNKKKTITRRNRRQPNRLDLRGELRSHKAEIAVALDVSGSISDEEFKQAIKEVLSIVKNYNHEITI
IECDNEIRRVYKVRTEKDIKDRIRIGGGTRFSPVFEYANNKKINLLVYFTDGKGENKLQVIPRGYKILWV
ISGRGDKISLKEPYGAVKKLTKVKTNDEILEINDVRNDGYSMNSQAPIL
>gi|260688216|ref|YP_003219350.1| hypothetical protein CDR20291_2874 [Clostridium difficile R20291]
MNFIDTLKSVDLILSTGEVPLIVGESGIGKTALANKLAKENDWSLIVIDGNLLKEGEIGGLPTIESYVGV
NSNGYKTEKKTTVYAVHNKLREIDEEISKSKTVLLFIDEINRCEHTVQQELMNLILNREINGYKLHDDVK
ILAAMNPSSKYGSDFDYQVVDMDAAQENRFVWLNMESDHTQWIKWAIDEGIERKVIEFISTFPEYLHKIN
EDDVRATPRSYERVSKIYKVYKEKNNSIPRAVFLNVVKGNVGKVIAEEFISFIESNSEPLISYEDVFLRE
SIDEPIVERVKNESHTRLYLSAMNILKDLELNIKNDKYESNHYINRFIEFLKMYPVDLMIGIMKDIRNSY
IEVYKKAIENEGFVKSYFESYSLIRG
>gi|260688217|ref|YP_003219351.1| hypothetical protein CDR20291_2875 [Clostridium difficile R20291]
MEKLRVIEMIKNNPNIIATIDNPTDEMKLLAIKENGLVLEYINNPTREMQELAIDNNIRAIKFIDNPTED
MMIKAVNEGWSILDYIKNPTDKVIEMAINQAGWAIKYAKNPSEELQLLAVRKNYDSIKFIKQPYESVQEE
AVRISYDALRYIDSPSYNAELIAIKNNEAAISFITDLDKNKMLEFLKVNILVIKYILKKVSKDELESVLK
EVLSKEDVEEKYIRDFLNCSVIDRNSESIPIDKIMFIYKYGSKTAKKIAVDEKLKIM
>gi|260688218|ref|YP_003219352.1| proline iminopeptidase [Clostridium difficile R20291]
MNLIIVYNYKLEEINMKITEGYMPFKGFKTYYRIVGENTEGKKPLVLLHGGPGSTHNYFEVLDKIAESGR
QVIMYDQIGCGNSFVEGHPELFNADTWIEELIELRKHLGLDEIHLLGQSWGGMQAIWYAIEYKPKGIKSY
ILSSTLSSAKLWEKEQKRRISYMSEVDQKALLDAVNTGDYSNKEYNDALERFMEMYCAGEVTEDSPECLR
RPKKSGSEAYIVGWGQNEFSPTGTLSGYEFTDRLHEIKEPCLVTSGAIDLCSPYIAKTMYDRIPNSKWEL
FEYSRHMPFVEENEKYIKVLTEWLNAND
>gi|260688219|ref|YP_003219353.1| hypothetical protein CDR20291_2877 [Clostridium difficile R20291]
MHLNNINSLKVIKLSLGCSLAIFIAWLLKLEYSMVAGVIVLLTVKDTKRETLKGSIGKIYGFLLCTIFSY
LCFNILGYNLTSFSIFIFIIIPLCFLLNIQDVIAMCVVIASHYYLQGETSIKWILNEAGIFAVGTGIGVL
INMYIPTNIHKIHEVQKKLQEEVSIVLIDIADIIVNPKKENGYSRDLYKLNSLIDSSISETYDNINNTLL
SDTRFFLEHMDIIKSQRDILENLYSYVSQLNSTPPQAHILSAFIHKIGYTEFEAETGNLLLEELKRLMLS
MKNHPLPVDRTEFENRAILFLCLTELKQFLVNRKHAQMLRDNNFYK
>gi|260688220|ref|YP_003219354.1| hypothetical protein CDR20291_2878 [Clostridium difficile R20291]
MKKIRKLATKLLITTIVLVSGMSMTVYGMTAKEVTAKTPKSYVTGTNSVYGPKLSQAQLNSVAQATADFM
NNKITKNMTTDAKILVAYNHIKNNTTYVDWNAVEGANTAYTLVTKKGACSGMARSMKALCDAMGIESYYV
HSTSNDHQWNLIRFGDGRLYHVDIDANKSAGKDIIYKSLSHPLPFDKTAYPTVGAVAQTQKPALPGKHTM
LPHQDGAKVVGKFGDIKDKHVMYEGVRCVVINSSVNTVTFLGSKSNLDPSNLTIAVIGFMNTPYGMFALA
PEGEPVEYPFKYDKPFSLDFSGKNRSGAELAKYCKKNDVTIKIEITDEKANIGLGQIMYIRYE
>gi|260688221|ref|YP_003219355.1| putative phosphosugar-binding transcriptional regulator [Clostridium difficile R20291]
MSCILKLKQIFEDLTEVDKKIADYILNNTEAISKLSVSELASNSKTSTASIVRFSRKMGYSGFGDLKIEI
AKDLMGKENEYTYVDENYDCNIDSVINKITNKNIETINQTRLLNEKDIIKEAVEQIIKAKNVYIFGVGGS
ALVALDLQMKLLRINKQAFTSLDSHTQLMVSSNVDKEDIAIAISYSGESKEVIKSIENAKLKGCKVICIT
KYSDNHLSKISDLKLVVPNIEKRLREGAISSRIAMLTLIDIIYISIIQENLNEAEQKLQETKRILDYLNI
NNA
>gi|260688222|ref|YP_003219356.1| putative acyl-CoA reductase/dehydratase [Clostridium difficile R20291]
MYFLGVDGGGTKTTFTLVDEELNIVGTITKGTCHYNQIGFDNLTKLLITGLEEVCKDAKINVEEITYAFV
GLAGYGKIKEVLYALEVATKNAYSHINYTLGNDVEIALAGSLNGEKGINIIAGTGSIAQALDKDGNLHRC
GGWGYVLGDEGSAYYIGMATLKMFTMQSDGRCSKTKLYDLIKRHLNIENDYDIIKYVNDGIQGDRIEIAK
FATICLKAVIEGDNTASKIFDDAAYELSRLIIGLEHHFEQGTKIKVSYSGGVFKSGDLILEPLKKYLNKT
RFGIVRPVLTPDLGACLLAKKKYYSK
>gi|260688223|ref|YP_003219357.1| putative sugar-phosphate isomerase [Clostridium difficile R20291]
MLIKTLENLVTEGRNKNTLQIDKEDTLGIIELINNEDKTVAYAVEEQKESIAKAVNIIVDRMKQGGRLFY
IGAGTSGRIGILDATECPPTYGVDFELVQAIIAGGNQAIFKAIEGAEDDKELGKQDIIDRGVTSKDVICG
IAASGRTPYVIGAMEYAKELGCAVLSITMNPNSEMSKKADLPINIIVGAEVIMGSTRMKSGTAQKMVCNM
LTTASMVKMGKVYSNLMVDVKTSNEKLVERAKRIIMIATNVKYDVAEKFLEEADNRVKLAIFMIKSGLDK
DSAKSILDRQEGYISEALKSIEKL
>gi|260688224|ref|YP_003219358.1| hypothetical protein CDR20291_2882 [Clostridium difficile R20291]
MTQMGRLGISIYPEKTTSKEIYDYIDKAAENGFTRIFSCLLSVKDTKENIIKKFKSINEYAKFKGFEVIL
DVNPRVFGELEISYKDLTFFKKTKADGIRLDMGFTGSEKALMTFNPQNLKIEINMSNNTNYIDTIMDYQP
NKENLTGCHNFYPHRYSGLNLEHFIKCTERFNKYGLRTAVFVTSQNETTFGPWPVTDGLPTIEMHRNLPI
DIQVKHIIAMNNINDIIISNCYPTYEELKVLGSMRKDMVTFDVAIEENIREVEKKILFEEIHFNRGDISD
SLIRSTQSRVKYKGYKFELFNTPKIIKRGDIVIESSEYGHYAGELQIALTDMKNSGKSNVVGYIRKEELF
ILDYIKPWQKFDFKPSTK
>gi|260688225|ref|YP_003219359.1| PTS system, IIc component [Clostridium difficile R20291]
MLDKFTEFLDSKLSTSMARLAEQRHLRAVRDGIVASLPLIIVGSFFLILAFPPLPDSWGVTQYLKENAVT
ILLPYRMTFFIISVYSTFGIGYSLAKSYKLDGLTGGLLATATFLLTIVPTAIEGLTPDLLKIVEKSPELL
AWYNSIPQGWQMPMANLGGGSMFVAIVTSIIGVEIYRFTDKSKFKITMPEAVPASVTRSFEALTPAALII
ILMAIVTYFLGFDWHGFIAKLVTPLVSATDTLPSVIILIFLITFFWSFGIHGVSIIGSLARPLWIQLLDA
NTASYAAGQAVPGIAAEPFFQWFIWIGGSGATIGLALLLAFRAKSAYGKSLGKATVIPAIFNINEPIIFG
APIVLNPILIIPFVVAPIVMATVSWFAMSANLVSRVVVTAPWTLPGPVGAYLATGGDWRASVLNLLCIAI
SIIIYYPFVKMYDKRLLHEEKVEEQEAY
>gi|260688226|ref|YP_003219360.1| putative PTS system, IIb component [Clostridium difficile R20291]
MRVLFVCSSGMSSAIAVNALQKEGAKNGIDIDVLAVGTQEFENEVKNGWDIAMVAPQVRHRFDYLKAFAD
EASVPCALIQAQAYSPLGGPKLLKQVQELLSK
>gi|260688227|ref|YP_003219361.1| hypothetical protein CDR20291_2885 [Clostridium difficile R20291]
MEKNQRTDYNIPTISFKSGLILIVSSLVSTVVFPLLLSIFGIDNRFGVVIGNSLITSFAVAYTRYFVETK
RGFSLGFFRLYILFVLSFAIIGYFWIYKGIHI
>gi|260688228|ref|YP_003219362.1| hypothetical protein CDR20291_2886 [Clostridium difficile R20291]
MITMYSVGLMSGTSLDGVDAVLAEISGNGRNTKVKQIEFITLEIPKDIKDEIRKCCIEEESSVDLICSLN
FKLGYLFSKAVKSVCHKANFHIANLDFIASHGQTIFHIPRSYNNFVSSTLQIGEPAIIAYETNTKVISNF
RVMDIAAGGEGAPLVPYSEFLLYSDKNKNLALQNIGGIGNITIIPKSCNIDDVFAFDTGPGNMIIDGVCQ
RLFNRKYDKNGYFASKGKINEEMLKDLMSHKYLSQAPPKSTGREVFGQVYLDNMLNKYKHVDKYDLIATV
TMFTAKAIYYNYKNFILPKVNVDTLLIGGGGVHNLTLIGYIKELLLEVEVLTQDEYGYSSDAKEALAFVI
LGNETLNNSFSNVISATGAKNKVILGNITPKPFGGK
>gi|260688229|ref|YP_003219363.1| two-component system sensor histidine kinase [Clostridium difficile R20291]
MLVKYLKGRSKYIALPLVVVSIINIYLFAIDILKNRYSELIYLDFLVLFIIMVFFVIDYINFRNSYINLY
NCIENSGEIDSYLIDGQSFEENLIKDIIENLKIKNNSDIETYKQSLKELDDYIAKWVHEIKIPISSLSII
TDRLSSIEDSLDIKNQVAKINFLVNSILYSSRSNTMFEDVFINKFNLEKLVKMSIKNNSFLLIKNNVEVS
LNELENDVYTDSKCMSYVLDQIINNAIKYSKEVGKIEFNSKKLENGVVLSIKDFGIGINEEDISRVFDKG
FTGKNGRNQLYKSTGMGMYFVKKMIDSLGHEIEVCSKIGSYTIFNIYFYDISDYLSLDS
>gi|260688230|ref|YP_003219364.1| two-component system response regulator [Clostridium difficile R20291]
MENIQMYRILLVEDDIDLSKEIALALEKWGFKVELIDDFEVVLDEFMDKKPDVVLLDVNLPLYNGFYWCE
KIRAISNVPLIFLSSRDSDMDLIMGINNGADDYITKPFSIDILVTKINGIIRRVYNYSDSNSILYCEDLM
FDVGKGIIKHKYKDKSIELTKNEIKILTLLLKNKNRVVSRESLMMTLWDNDEFVTDNALTVNMNRLRSKV
KELGFDDFIKTKKGIGYII
>gi|260688231|ref|YP_003219365.1| putative ABC transporter, permease protein [Clostridium difficile R20291]
MSILGIAYNNFKSNIRTYLAFFISMVFSVVVLTNFELLRYGDAINVLQEENKKFTLSVLVAVIMILSVFL
FFFIWYATNIFFKNRSKEIGILSFMGLDLYTIGKIYFVENMLIGISSCITGIIIGIITSRFFQVVIIKLS
GFNIKVSNGLSIEAILYATLIFISIFIIMAVKGFITICRSSVINLINISKKQEKIPKVGIGIYILAIVSL
IVIGYGYYLSTNIRTGDITSVLPVIGIIIVGTYGLFKSVMPVIFDIIIKNKKILFNGNNIIAINNINYRL
NKNYKTYAIIAIIITTTISTLGASVAMKHIHKNAQEQRNVYTISIVSMDKDEVNKKQIENIIKDTNKIKY
SVNPELTILKKTDIKEAYDTTDTIMKYSDFCNTLKVNGNDKELKEYGERLVSGNNVIELKSPQTIASIAT
KEVKTKLDGQLYNISRGEVKVPVLGTGLNQSIIVVNDDTYFKLRDKGQQVYFYGAKVFQEENSQVMFNNI
EKNLSLKNGYIQNGYKAQGESQWMKFAYVVLVFLFLVFAIVAGSIIYMKIYSDAYEDKEKYKILLKIGTT
EKDINRAILKEVAIFYTLPMLSATISSYFALRLAGDLLMNDLSGIYILSLVICLIIFVIYGAVSVNKFKS
VVYKN
>gi|260688232|ref|YP_003219366.1| ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MKEILKIKNISKDYGIKGFKTNVLKNISLTVNEGDFIAIMGPSGAGKTTLLNLMSTLDKQTSGEIILDGI
NISKVKNNELSKLRREKIGFIFQDYNLLDNMKLMDNIALPLALGKKKSKEIEAKVFSIAKKFGLENHLDK
YPYQLSGGQKQRGAAARSLITNPAVIFADEPTGALDSKSAYELLESLEKINRENNATIIMITHDPLTASY
SNEVYMINDGNIKCKLNKGNSRKEFYGKIMDMLASMGGEM
>gi|260688233|ref|YP_003219367.1| putative proton/sugar symporter [Clostridium difficile R20291]
MINKAIKFKFIIFYFFSYIIFAFASTKFTPFLSKLGYSAFERGIILSSYAITNILFQLLFGVLADKYQTM
KKIVLISLSVYGIASVIMFSTESATFIIYLLLVALSGGLLNTCCSLYDTWIIGCGDNINNYLSFIKTFGS
IGWAIGSMVASYLILRFSYFGLSVAIGLIVVLLIINILLLPDIEKINKKINVTNKDIIELLKDKKYILLV
CILFLLYSMVVANNCTVIDKMIALNATNSQISLKWSLQSLLEIPTYLAGSYLLKKYSSLNLLKLSAIMIT
VQFLLFALTNDSNIIIILCVFQVFSTPLILITSKRLIFEVSPKKLRSSSQLIALSIFMGGSSLIIPTVAG
FLSINIGYNYTLMILSLFGCLAYGLIVLLNYLQE
>gi|260688234|ref|YP_003219368.1| PTS system, IIa component [Clostridium difficile R20291]
MFFKRKKEASTINSYIDGKIINLGEIPDKVFSTKVMGDGFAMIAKDNILKSPTKGVISFIAQTNHAIGIK
LQNDVQILIHIGLDSATTKKENFKLEVKQGQEVNMGEKLVEIDNKLLENTLYIPLVIVENPNTVKYHLSN
LNQEGNSGIKVINFD
>gi|260688235|ref|YP_003219369.1| hypothetical protein CDR20291_2893 [Clostridium difficile R20291]
MITNKIKNITAVLKDENIFLSVVMVCFLILPVLYIVYLELTSLFTNISFSQLLNNDVNASLNLISNFSAV
YSAYVIYNIKKNKEIKENMIAFYLVLLGQIFQIYTITIVIMFTYIYKFVGIKQIISSIKELQWGKSYKAL
FSSIAVCLISLFVMIIRIKLIM
>gi|260688236|ref|YP_003219370.1| putative maltose-6'-phosphate glucosidase [Clostridium difficile R20291]
MERKRQRILIAGGGSTYTAGIVTMLIESVAKFPIESIKLYDNNDERQRKVAEACAIIVREKNPEIKFSYT
TNPEEAFTDIDFVMAQIRVGLYALREQDEKIPLKYGVVGQETCGAGGIAYGLRTIGPIIEMIDYMEKYSP
NAWMLNYSNPAAIVAEACRVLRPNSRIINICDMPVCLEEIFARILGLNSRKDFDVRYYGLNHFGWWTSIK
DKEGNDLMPKLQEYCAKKGYEEFTPQGQHKESSWLETMRAAKDLLEIEPTTLPNTYLKYYLMADETVEHA
NPNYTRANEIMDRREKDTFEECERIIKNGTARDTWFDASEHSQFIVELACALAFNTQERFLLIVPNNGAI
ENFADDAMIEIPCLVGKDMVEPMSIGKIPTFQKGLMEQQVASEKLAVEAWIEKSYQKLWQSFTMSKTVPS
AKVAKEILDEMIVANKDFWPTFK
>gi|260688237|ref|YP_003219371.1| PTS system, IIbc component [Clostridium difficile R20291]
MRRGVIYMMKKIQRFGGAMFTPTLLFAFAGIMVGFSIVFQNQSIMGSLATPENIWYQFWGVISSGAWMVF
NQLPLLFAISLPIALAKKQQARACMEALATYLTFNYFVGSMLSFWGKSFGVDFAAEISAGSGLVSIAGIK
TLDTGMVGALLISGIVIYIHNRFYDKELPDFIGLFRGSSLVVAICFFVMIPVALLTCFIWPHIQNVIRHL
QTFFINSGNIGVWCYAFLQKILIPTGLHHFVYAPICYDSVVVPGGTSVYWATHIQDFQTSAKTLKEMYPI
GFSLSGLSKVFGSLGVFGAFYVTAKPEKKKKVLGLMIPATLTAVLTGITEPLEFTFLFVAPLLFLVHAFL
DACLQTISFALGVVGDFGGGIINWVVLNWLPLGMYHWKVYVVQVVVGIIFSFIWFFLFTFLIKKFDMKTP
GREEDNEETKLYTKNEYLETKDEKGNKLSKASQQASEYIKLVGGAENVVDVTNCATRLRLTLKDDSIISK
EEDFKVVGAHGLVHNGKAIQIIIGLSVPSVREEFENLL
>gi|260688238|ref|YP_003219372.1| phosphosugar-binding transcriptional regulator [Clostridium difficile R20291]
MRLEEMIFLNYNKLNDTDLLIWKYITANKKHCSKMSINELAMKCNVSRATITRFVKKLDLKGFSEFKVLL
SWESEKVHVIENQSFDIACNSIIKYVEDQKNKDYDALCKLLYESRTIYAYGSGDIQNVVAKQIKRMFLSC
QEIIYDFEGRTFDDSFYNIVSKNDVMIIISLSGENENTLNIARRLKLIGTKIISITEFKNNTLTDLSDES
IYISATNISFLQMHPSYKLTMLYFILIELLFIKYSIYKRHRMITEGIDCKL
>gi|260688239|ref|YP_003219373.1| hypothetical protein CDR20291_2897 [Clostridium difficile R20291]
MKKKVLFLVIILAFIILLGNSTYSQKNQLSEEEKVDDFNYVYNVVKTGYPYLGVNKRLNNIDWLANKDEY
TKRIKNTENDEEFIEELSSILSDLNNKHTEVIDNKKRYELFKKSYSNNDWYDFLNDKKVVDRYDSMNLKI
KMPDDIFVKKELILKDVIKGQIGYMYLPSMSSKNGSINNDLKIIGDYINTLEKHKALIIDIRGNLGGSDR
YWQGIVSKLIKNDVKINGYRIYRNNNEIVKKYTNARNIKLNPVENLPASVKENAPKEIIKDFNDFEDTSY
TIKSTDDSKFKGNIYLLVDRKIYSSSESFAMFCKETKFATLVGETTGGDGGCIDPVLFNLKNSGLIVRMA
SCMYLNKNGICDEEFKTIPEFKVKDCKRTADFKDDNCIRKALELENINY
>gi|260688240|ref|YP_003219374.1| xylose isomerase [Clostridium difficile R20291]
MCKILGGHEMSEIFKGIGQIKFEGVKSDNELAFRYYNPEQVVGNKTMKEHLRFAMSYWHTLCGEGNDPFG
VGTVERPWNNVTDPIEIAKIKVDAGFEFMSKMGIEYFCFHDRDIAPEGRDLEETNKILDEIVEYIKVNME
KTGIKLLWGTANMFGNPRFVHGASTTCNADVYAYAAAQVKKAMEITKYLGGENFVFWGGREGYETLLNTN
TELEMDNFARFLQMAVDYAKEIGFTGQFLIEPKPKEPTKHQYDFDTATVLGFLRKYNLDKYFKMNIEANH
ATLAGHTFQHELNIARINNVLGSIDANQGDLLLGWDTDQFPTNIYDATLAMYEVLKQGGIAPGGFNFDSK
VRRASFEVEDLFLAYIAGMDTFAKGLLIAHKLLEDEVFENFTKERYASFSEGIGKDIVEGKVGFKELESY
ALQMPVIKNKSGRQEMLEAILNRYIYEVDTISNK
>gi|260688241|ref|YP_003219375.1| xylulose kinase [Clostridium difficile R20291]
MKLEYVLGVDIGTSGTKTVLFDKLGNIIKSCTYEYPLIQEKSGWAEQDANDWWKAVVESIREVVQSSNIS
SECIKGIGLSGQMHGLVMLDNEGKTLRNSIIWCDQRTVKECEEITDLVGEERLIEITANPALTGFTASKI
LWVRNNEPDIYINTNKILLPKDYIRYKLTGEYATEVSDASGMQLLDIRKRDWSDEVLEKLNIDKNLLGKV
YESQEITGYVTRDVASLTGLKEGTIVVGGAGDQAAGAIGNGIVKDGVVSSTIGTSGVVFAYTKEPKIDKE
GRVHTFCHAIPNTWHVMGVTQGAGLSLKWFKDNFCQSEVEVSNSLGEDVYEIINNQVSQVPTGCNGLLYL
PYMMGERTPHLDPYARGVFFGLSPIHSKKEIARSIMEGVSYSLKDCMDIIENLNIDVNEVRASGGGGKSK
VWRQMQADMFNQDVYTINSSEGPALGVAILALVGAGIYENIQKACDAIIKTSTKLEPISENVDTYKIYHR
LYKRIYKSLKDDFKLLDEVVNTKINN
>gi|260688242|ref|YP_003219376.1| xylose repressor [Clostridium difficile R20291]
MQNNLLFLCKKYYNIILRRNIKLVTDKYTIREMNERLVLEQIIKNGPISRASIASTIGLNKATISAITKK
LIDESLVHEIGIGNSTHSGGRKPILLVFNKCAGISLSMDIGYDYIFSSLSYLDGTIINSKKLTDIQVSKD
NVIQLIDEIINSYNISKIDTPYKVIGLTLAIHGITCENKVLFTPYYNLNEIDLYSILSKKYDFPIHIENE
ANLTALAENTFSTVHNSLLSLSIHSGFGSGIIINNKLYSGRNGMSGEIGHTIIMPNGKLCPCGNRGCLEQ
YCSEKKVFEQLSSLENIPKIDSDIVKQLYYEDNQNAKKVIHEFCSYLTIAINNAITTYAPEIIYLNSQII
SDIPEILQITKDMLVSSFNKGINIEISSLGSEASLYGGSAVNIKSFLNIQNLTLINEI
>gi|260688243|ref|YP_003219377.1| PTS system, IIa component [Clostridium difficile R20291]
MSHGNMAEEVLNSAKMIIGDSIDYPTVNMKQDDGIEGTIEKLKKALEVYKESSEIIIMADLLGGTPCNAA
LLVANDDSRIKIISGLNLGMVIESAFLDTKELAAKLEKIGKDNISMVEQNASLLSDDE
>gi|260688244|ref|YP_003219378.1| PTS system, IIb component [Clostridium difficile R20291]
MILDMEMKGIKNIRIDDRLIHGQVATMWSNKLGVTRLMVVNDAVANNSVQKQVLRMATPAGIASSIITEE
TAIKNITAGKYEGQNVLLIVKSPVDLIPFVEAGFKIHNINVGNMSSRKDTTVLRPNISVTEEEKEAFKRL
LDEGIEITTIMTPDDKKTYLVDIL
>gi|260688245|ref|YP_003219379.1| PTS system, IId component [Clostridium difficile R20291]
MSDKVSLNKSNEKVKKSVLWRWFFTSSVSSNYEKMQALAYCYAVLPFLKVVYKDNPEKLQSAVLNHLQFF
NTNPWVAPYILGINVAMEELSSEETEEAVASIKTGLMGPVAGLGDSLFVVIPWTIFGAIAANMAIDGSPF
GILLWIVVSVALKLLSIPLFNAGYTSGTKLISSIEKSLKILTESTSILGLMVVGALIPSVVKANVALNFQ
QGDFTMKGQEILDQIMPGLVPAILVVIVYWALKKNIKPIYLILGVMVVSIILYALGILK
>gi|260688246|ref|YP_003219380.1| PTS system, IIc component [Clostridium difficile R20291]
MEPQLWQLLLIVLYGFFINYEKNSTMFGTYQPVTAGFITGLILGDINTGLYIGGTLQLLSLGISNFGGAS
IPDYQTASIVATFITITTKQEASVGISIGIPVALLMVQLDVLRNTIGIWLVHKAEDGAKKGNYKNITYMQ
MLGVLLTAATTGIPVALSVIFGPSLINTILKYTPEWLTGGLTVAGGLLPAVGIGLLLRYLPAKEYFSYLV
IGFVLAVYMKVPLLGVALIGGAIALIIYKKNLENQEQQYTVVGGMDEDE
>gi|260688247|ref|YP_003219381.1| glycosyl hydrolase [Clostridium difficile R20291]
MIKISEDYIEKRFDNELLRIEAWGKNSLRIRSFVDQNFVDENYALNEKPKLNKDDITINKNEDGSAIIKN
GKIKAVLDHRDRITFYNDKNEILLKEYIRLRAVKHDDGGEDVGTIEITKDFNSTLKLKSREYRPSYSGEF
EVTTRFESEPSEKIFGMGQYQHKFLDLKNTVLELAQRNSQISVPFYISSLGYGLLWNNPGIGKVSFAKNM
TEWKMFSTNFIDYWITCGESPKELNKNYSQVTGTVPMMPENLLGLWQSKLRYRTSEEVLDVVKEYSKRGI
KLSSIAIDYFHWPKQGEYKFDLDYWKNPKELVKKLKEEYSVEPIVSVWPTVQSDAENYNDYLENGYLVNV
NRGVRMTMQIQGNTVFVDMTNENAREYVWDRIDKNYKQLGIDYYWLDVAEPGYSVYDFDNYRYKKGNVLS
CGNIYPIDYLKMIYDGLHNDIESVVTLVRGAWAGAQKYGALVWSGDIDSSFEAFNNQVNTGLNMGLAGIP
WWTTDIGGFHGGNPKDPEFRELMVRWFQYATFSPILRMHGDRLPHSKPLSNKGGGSMVTGAPNEIWSYGE
EVEVILTKFIKIRESLKTYLKKLMKEAHEDGTPVMRTLFYEFPEDDKTWEVDNTYMLGDEILVAPIMNYK
DRSRKVYLPKGHTWENIFSGVSYEGGKTYEVECPLEEIPIFLKQDSSYNFKELKNILGEVKS
>gi|260688248|ref|YP_003219382.1| hypothetical protein CDR20291_2906 [Clostridium difficile R20291]
MKRNREIVVVCHCILNCNSKVEGLSEFKGAQNIAINLINKGYGIIQLPCPEMIMYGINRWGHVKEQFDNL
FFREQCRQMLIPHVRQFNEYLKNDYDIKSIIAIDGSPSCGYNKTCSSKRWFGELSGCNELMDKINDIQMV
DGKGIFIEELEKLLKEYNLEIPIVGFDELREDK
>gi|260688249|ref|YP_003219383.1| hypothetical protein CDR20291_2907 [Clostridium difficile R20291]
MDTKKVTFSSICIVINIVLGMVISMINIPLLFLDTVGTVLGAVVLGPFWGALIGGCTNLVLGVISGPTNI
PFALVNIVLGLIVGYISKKKGFGYKEAIITGVILSIVCPLIGTPISVLLFGGLSGSGADLLVGFLVQSGQ
KIFTAAFFPRILSNIVDKPLSCIMVVYFISKMPKGFIKQYSKNTSSSY
>gi|260688250|ref|YP_003219384.1| hypothetical protein; hypothetical protein [Clostridium difficile R20291]
MKAGEIEFLSYLEGSNKSFVVPVYQRNYNWKKEQCKRLFDDLEDIIDSGFRTHFLGSVVSIYSMGKEYLI
IDGQQRVTTVSILLIAMCQIIKEFGESKGIITTEEQIKECYLINKHSRDKDGKIKLKPIAEDRKAYYELF
EEEMNTDRNSNIVSNYLYFYNRIKEDNISIDDLFDAIQKLTIVEIELKNGEDDPQLIFESLNSTGLDLSE
ADRVRNFVLMGRSSKLQEEFYNNYWYKIEKNTSSNVSSFIRDYLTIKERSIPNKNKVYFSFKRYVSDNGI
DIEILLKDLLKFSNYYREISYSCTDDNDVNKVLKRINKLEIFVSYPFILELFNDYNEGIINKKVLVESLN
LVECFILRRIVCDVPPNALNKVFMNLGREIKKFSDYKENYSNILRYIFINKKSSQRFPTDSEFSNAFETK
DIYNTKSKNKLYILERLENYNNKEIVDLENLINNNMLNIEHIMPQTLTNKWKESLGDNYKEIHDKYLHTI
GNLTLTGYNSKLSNKTFEEKKEMEDGFKDSRLYLNKYISSIDKWNEEEIKNRTKILLDRAVEIWKYPSVT
YEPPSNSENIFTLEDDDVNFTNESIVSFSILGESYKAKNWTEFYEQVALTLYDLDSVRFNSIVDKTYKRD
FIDNIKSRDVYKLRKGIKISENIYLETNLNTEAKLNIIRFLLNEFDIELNEVIFSIK
>gi|260688251|ref|YP_003219385.1| type i restriction enzyme r subunit [Clostridium difficile R20291]
MGNFDFLQKKKNFNSFNTACLEAEKSILVSPSTCATITRRALELAVKWLYANDSDLVLPYQDNLSTLIHN
NSFIELIDYDMLPLLKYIVKLGNLSVHTSANIERGEAILSLNNLHQFVSWIDYCYSDEYTAEDFNEDLLL
HGEEKRTRPDELKNLYERLSSKDKKLEEVIKENEKLRKSLTEKRKVNTVNYDFKIDEVNEFETRKRYINI
ELKLAGWEFGKDIGEEIEVQGMPNESGVGYVDYVLYGENGKPLAVVEAKRTSKDPKIGQQQAKLYADCLE
KRYSQRPVIFLTNGFDMYIWDDYSDRKVYGFYKKSELQLMIDRRKSKKSLSSVTINDEISNRYYQKEAIR
AVCEALENKQRKTLLVCATGTGKTRIAISIVDVLSRHNWIKNILFLADRKALVKQAKKSFTKLLPNLALC
NLLDSKDSPEDARMIFSTYPTMMNAIDDTKSKDGKRLFTPGHFDLIIIDESHRSIYKKYKSIFDYFDSYL
MGLTATPKDEIDKNTYSVFDMENGVPTYAYEYNKAVEDGYLVDYTSIEFKTKIMEDGIKYDELSDEEKEE
YENTFNDDESIGDEIGNNAVNEWLFNSDTIDLVLNKLMTEGLKIEGEEKIGKTIIFAKNTKHARAIVERF
NKLYPKYGGNFVKAVDYSINYVDSIIDDFSDKNKLPQIAVSVDMLDTGIDIPEILNLVFFKKVRSKTKFW
QMIGRGTRLCPDLLGVDMDKERFLIFDFCNNFEFFKFNPKGFEGNKAETLTEKLFNIKVSMVKELQDIKY
IEGKYAELRKELLEELITSVKALNEDSYIVRMNLSYVHKYKNENVWSNIGAVAQNEIREYISPLITSYSD
DELAKRFDVVMYNIQLAYLQNNNASKGIRHVMVTAEKLSKLGTIPQIQQQKYTIEKAMTEDFWEDSDIFE
VEEVRISLRELIKYLEKSSQKIYYTSFEDMIVAEDRNDSVYNANNLKNYKKKVEYYLNSHKDELAIFKLR
NNKKITKQDVETLEEILLKQLGNCDDYKKEFGDTPVSQLVRKLVGLDREAANEAFSEFLNNKSFNTKQIH
FVKLIVDYVVKNGFIEDNKVLMEDPFRTVGSIIDLFENHIEERNKLIKTINKIKENASEIG
>gi|260688252|ref|YP_003219386.1| hypothetical protein CDR20291_2910 [Clostridium difficile R20291]
MVIRNKLSWNSIEEVNRDFGSCLYDLQNFKILYDKEEMPELWARYIKEGFKSYMVSFLELTKAMLYYKSI
DLNIKSKNFYDYLLACEYHNLLPKNSSIVIETLRKLRNDDSHGYDIPQFEDMYELFTENEEVFVSIRNSC
KK
>gi|260688253|ref|YP_003219387.1| restriction modification system dna specificity domain [Clostridium difficile R20291]
MVDEAKILDVVSISRENVKKFDGERSYLSTGNLDFNKISNLEIVTYENKPSRANQTVNIGEVIFAKMKDT
KKTLVINKTNKNIIVSTGFYVLKPSKEILPQYLYHYLNSSYFLNQKNRLSKGATQSALNNEGLANIKIRM
YNLKVQEKVVRVLDKAQELIDKRKEQIEVLDELVKSRFIEMFGTPSKNEKNWEISEIGKYLDVLTDYHSN
GSYETLRDNVTLLDTKGYALMVRTTDLENNNFEKGVKYIDEHAYNYLEKSKVFGGEVIINKIGSAGKVYL
MPFLNKPVSLAMNQFMLRFNEDKVNHIFLYNLLLTSYMESKIKEKVRGAVTKTITKDAVRKINIIVPPIR
LQNQFANFVKQVNSLKFEMETSLKELEDNFNSLMQKAFKGELFN
>gi|260688254|ref|YP_003219388.1| type i restriction enzyme m subunit [Clostridium difficile R20291]
MITGELRSKVDKIWETFWTGGLTNPLEVIEQFTYLLFIKGLDEVETKNEAEATLLGVSFEKIFDDEHQHL
RWSKFSNEGNSEKMYEIVQNEVFPFIKKLHGNKESAYAKYMGDAIFKIPTPLMLSKIVDGISNLELSKDR
DTKGDLYEYLLSKVATAGTNGQFRTPRHIIDMIVRLIKPTPEDIIVDPAAGSAGFLVSSQQYLRDNHSSL
FLVQGLKEHFNNGMFYGFDMDRTMLRIGAMNMMLHGVDNPNIEYKDSLSEVNTDKDKFTLVLANPPFKGS
LDYEAVSADLLKVTKTKKTELLFLALFLRVLKIGGRCACIVPDGVLFGSTGGHKSIRKEIVDNHKLEAII
SMPSGVFKPYAGVSTAIMIFTKTGTGGTDKVWFYDMKADGYSLDDKRNEIKDSDIEDIIKRFDNLDGEVD
RKRTEQSFFVDVEEIRENGYDLSINKYKEVVYEEVVYDAPSVIIGRVKVLEKEIVDGLEELERMLEV
>gi|260688255|ref|YP_003219389.1| tagatose-1,6-bisphosphate aldolase [Clostridium difficile R20291]
MALVTTKQILLDAQEGHYAVGAFNVENMEMVMAVIEAAEELKSPVILQTTPSTIKYAGLDYYLANVKVAS
EKASVPVAMHLDHGSSFGLAMQALRVGYTSIMIDGSHESYEDNISISKSVVDACMPSDIPVEAELGKVGG
KEDDLDGGDGGAYTDPLEAKEFVERTGVSSLAVAIGTAHGLYKGEPKLDLDRLSEIREVVSVPLVLHGGS
GIPDEVIKESIKRGICKVNYATELRIAYSNGVKDVLNSDPEVIDPKKYGKKGLESVKDFVKSRMEVCGCV
GKAIGTVKC
>gi|260688256|ref|YP_003219390.1| PTS system, IIabc component [Clostridium difficile R20291]
MGKKMILGVTGCPTGIAHTFMAEEALKNSARELGCDIKVETNGAIGVENKLTAKDIEMADAIIVACDKNV
DMDRFNGKPVIEVPVKEGIHKANELIQRCIDGKVAIRKGNLSSSKIAEEGNLSFGQKLYKDLMNGVSHML
PLVVAGGVLTAISFLWGIYSFDPNSEQYNQIAATLKSVGGYSMNLMVPVLAAFIAQSISGRAGMLAGLVG
GMISFDTGSGFLGGIISGFLAGYLVKLFVHLLRKLPRQLEGLKSIFIIPIVSVGLVGVAMLLLGGPCSAL
NNAMMNFLSGLQNSSPIILGIVIGCMSAFDMGGPVNKAAYVTGTMLLGQGNYLFMAGVSAACITPPLVIA
IASTLFKNRFTEEDRAAGLINYILGSTHITEGAIPFAAKNPLKVLPVLMIASSISSILTYIMKIEVPAPH
GGFLVLGLVNKPLLWVGCIFVGSLVGAVLYMMVTPKVVNEKNTIENTNATKDGHKNESAESENVSNNISL
YSEETVILDVKGKNKTDVIDEMIGILDKSGVLLDKKKFKEEILKREEISSTGFGMGIAIPHAKTDAVKVP
RVAVGVSKEGFDFESEDGSLAHIIFMISATDNGDNLHLKTLSQLSSKLMNEEFLNELLNSKTSREIVSKL
NNEEIKSV
>gi|260688257|ref|YP_003219391.1| putative tagatose (1)-phosphate-kinase [Clostridium difficile R20291]
MKTYTAQARGKTMIYTLTTNPAIDMNISTNGIKRKLVNRTSNAVYSPNGKGLNVTFVLGHYGIESKILGF
FGGFSGKYIVEESEKRGFDVLPTWVEDTTRINIFLNDGSDEFKFVNSGSYVNEKQKLDMLDKIQSLADIS
YLSISGSLPPGIDDNYYEDIFKICKNKSIKTILDISSPKLKELLQYNPYLIKPNDEEIKDIFGIIVRDEE
DIKDVLKLLHLKGAQNILLTLGEKGSYFYNGKSIYYASAQPVTVVSSACAGDSALAAFLSIWLENPEHIE
EALKRSAATGASVAESNGIGNLENVEDYIKNIRVRKVV
>gi|260688258|ref|YP_003219392.1| phosphosugar-binding transcriptional regulator [Clostridium difficile R20291]
MIIELNKSNSENLTKTELEIIKFINENESILPELSIVEIAHETYSSPATVSRAIRKCGLNGFNELRYRLT
VKDENDDIQNMGDIINKSFIEAQRVIEQISLTTLINIIKTINKSSKIYILARGLTEYVAKEFSLKLQLLD
FNVVFINDPNIMKIKSKSIKKDELIIIFSLNGNTIELVESAQNANLVGAKVITCCCSESAKLIKYSDLYI
VGYKHEHISISEYEVSSRLPLYIISRIIIDYMVRYNNSEN
>gi|260688259|ref|YP_003219393.1| hypothetical protein CDR20291_2917 [Clostridium difficile R20291]
MNVIKKFIFVILIINILGCGISLILQSSLGSDAITLLNEGIHIKLGISYTIAGLIYNGTLLLIALLLNKK
SLGLGSCVYVLVAGIFIDLYIYLLLDFNISSLGIIIRIMSFIIGHILMCSGFAMLIKFDIGMSPLDAILI
YIEGKFKYPYKVLKTIADLIFLILGVYLGGNLGFGTIFSILCTGTTISIVSKMISVNKKRYYSSI
>gi|260688260|ref|YP_003219394.1| 6-phospho-beta-glucosidase [Clostridium difficile R20291]
MIKLSKFPKDFLWGGAVAANQLEGAWNEGGKGWCLADVHMYDKDRDISKHYESDMTVDKIKFAMKDNNGY
YPKRNGIDFYHTYKEDLKLLKELGLKCFRFSINWARIFPNGDDLEPNEEGLKFYDNLINEVIDNGMEPIV
TLLHYETPLNLVLKYKGWSNRKVVDFFVRYAELILNRYKDKVKYWIVINQINLMYHESFNSVAFCVDQVD
DVEEAKYQAIHHQFMATALTKKLGKEINSDMMIGMMMADCTSYPEDCDPENVVFALKRNRIQYFFTDVSF
RGEYPAYIKRFFKENNINIVMEEGDDKVLKENTMDFLALSYYYSTTVSASKNTMNPIDNVKNQYLKANPW
GWAIDPKGLYNTLSQYYDRYQKPIMIAENGFGMHDKFEDGKVHDSYRIDYLGKHIEQIGEAIADGTEILA
YCMWSPIDIVSCSSQEMEKRYGFIYVDIDNNGNGSKERYKKDSFYWYKNVIRTNGEELKEKVDSF
>gi|260688261|ref|YP_003219395.1| PTS system, IIa component [Clostridium difficile R20291]
MTTEEHVIDEELVEVAMQIILRAGEARTEIKHALNDLERFDYKNADLKLAKAKEFMTEAHRAQTNIIQGE
ASGEKRAHSLLFAHAQDTLMTIFSELNITMSLVGIVKSIEYKVNNSK
>gi|260688262|ref|YP_003219396.1| PTS system, IIc component [Clostridium difficile R20291]
MGRLFMNKFIDLLSEKFTPVVNKITKNIWVQSVQSTIMKVLPMVFVGSLVTIVSVLKNYISFLPDLSPIN
QYTFGLLGLFIAFLLPMEIMKNKKFESMSVVAGLAGAGLMLMMIRPEITNEGAIFNFNRFGGEGMLVALV
AGLFSGLIMSLFGSFSFFGEDSALPDFVSKWFDSMLPIAVIMFIGWGLIYGLNFDMFEIIVRIFKPVSDI
AQTLPGFVLLNFLVVFLYSLGISGWVLSPITYAIQLSAIAANAAAVASGGLATNIYTYEVVQTGWITLGG
WGATLPLVLMMCLSRAGRIKAIGRACIVPSIMNINEPVMFGAPVAWNPFLMLPMWIGTVVISITTYLSMS
MGFVTIPSKVFNLWYLPFGISTFMVNQDVRGLIVLAINIVLLFMIWYPFFKAYEKEELKLESQEA
>gi|260688263|ref|YP_003219397.1| PTS system, IIb component [Clostridium difficile R20291]
MKNIKVLLACGSGASTGFMATSMRKSAKKKGIEADIKARSESEIDKYLPEIDCLLLGPHLDYMKDEIQKK
ADEYNVPVACISKTAYGRLDGVKALEEALELILNK
>gi|260688264|ref|YP_003219398.1| transcription antiterminator [Clostridium difficile R20291]
MYIIIRTFNYINIISYRFYFKTMRGNLMKTSKKELFLNFIKTQHDWIDSSTLANYLNVSTRSIRKYVNEI
NSTGEFILSSKKGYKVNLNNNCQTKVDSSENISPDNRLNLILKELIVNSNGINIFDLSEELFVSPATIEG
DIVKANKFIGSYNLKIKQSKFLLKLIGNESAKRKLMSSIIFKETGSDFLSLFDVQKIYQEYNLTKLKENI
IYILKKYNLFINEYAINNILLHLMITIDRIKKNNYIESVEVVNYIDNNNDISISRDISNFLESEYNLTLT
SAELYYLVFQLTNKTTVLNYHEMDTKSLPNYIDEHFVKLTKKIIKNVYDLYFIDLSDDEFVVKFTLHVKN
LISRAKNNQVLRNQIPQKLKDSYPLIYDISVYICNQIQILENIEIDEDEISYISLHVGSFFDRQKLLEDK
ILCALITPNYYDLQFKIVRDLEKRFNESIEIIQIFSDTHNLDFDNKVDMVITTLPISDRCPIPFVYVNPY
LNRKDYDNIQSKFIQIKDRKNILTVQNHLEMYFSESLFMKNIYLDSAKDYIKFMGNILYKNKYVKPNYID
DVLIREKMSSTAFNNNVAIPHSMKMDALKTGVCLIVNDKPVKWGEEKVQIIAMIPINEKEKEKFNYIFES
FIEILSEWNNVKELTKADNYSSFMNRIAYLIQNI
>gi|260688265|ref|YP_003219399.1| glycerate kinase [Clostridium difficile R20291]
MKILISIDSLKGSLSSIEAGNAIKKGILKVKEDAQVKILPLADGGEGTVDALVQGMNGKKETIEVTGPIA
KKVDATYGLLKNTSTAIIEIAQASGLTLVPTELRNPLYTTTYGVGEIIKEAINKGYRNFIVGIGGSATND
AGIGMLQALGFEFYDENNKLVGLGGKVLNEIRHIKIENRLKELDECKFKIACDVNNPLFGKNGAAYIYGS
QKGATSEIIEELDNGLRNFSKVVKNYLSKDVANVEGAGAAGGLGFAFLAFLNSKLESGIKIILEEIKLEE
ELKDADFVITGEGRLDNQTAMGKAPIGVAKLAKKYGVKVIGLAGATTEDAVKCNEEGIDAYFSIVNRAMT
IEEAMDKATASENMTATTTQIFNLITSIQQSKNM
>gi|260688266|ref|YP_003219400.1| putative glycosyl hydrolase [Clostridium difficile R20291]
MKKNVHIVPHMHWDREWYFSTEESRILLVNNMEEIMDMLENNHNYPYYVMDGQTAILEDYLAVKPECKER
IKKLVQEGRLIIGPWYTQTDEMVVGGESILRNLLYGIKDCDEFGEYMKIGYLPDSFGQSAQMPQILNGFD
IKYSMFWRGCSERKGTNKTEFNWKSDDGSSVLVQILPLGYAIGKYLPMNEDELRTRMDKYLPVLDKGATT
DHIILPNGHDQMPIQKNIFEVIYKLKECYPERKFFLSRYENIFKELEKNKDIDTIKGEFLDGKYMRVHRS
IFSTRMDIKSANARIESKITNILEPLASIAYSLGFEYHHGLIELIWKEIMKNHAHDSIGCCCSDKVHQEI
MNRFFLAEEKVDQLITFYKRRIVDAMSCEMALDKLVAFNLMPYNRNEIVNAQVITKMKAFEIFDKDNNKL
DFEVVHKEVIDAGLIDRQIVHYGNYDSFMVYTINFKDKIPAMGYKAYMIKEVEHMLEKAYEVCDMVDNDF
YTIQVNENGTLKISDKKLNKTFENVLLMENGGDEGDEYDFSPLPNEKLIFNDNIVANSTIKKNRFNNEIK
INYRLKVPKDIQARKNNRADSFIDFDIVINVPNDKAIINVVFNINNQARDCRVRTYIPTNIASKFSVSDN
QFGHIKRSVYDDAMEVWQQEEWSERPDSIYPMLTFVGLSDKEHGVAVLTNSTREFEIVGKKFDTIAITLF
RSVGFLGKEEMARRPGRPSGIKLPTPDSQMIGDIKIDLAIVTHEKSTLEANVANMAKEYLTKIQTYNKIP
YNAMKLNQSEIEVDYSYSLLKETNKDLVLSVVKKAEKEEALVVRFYNSKEETKSANVVFNKNIKTAKWTN
LNEKELESISIDNNSVNVECLMNQVKTILVK
>gi|260688267|ref|YP_003219401.1| PTS system, EIIabc component [Clostridium difficile R20291]
MEFKKITNENLVFLKQKIKTKEDAIKFLARKLYDEGKLTSYEEYLEAVMYRETLSPTGFERGLAIPHGKS
KSVKEAAFAAMTLETPIENWESVDSNNKVELIFLIAVPESEGGNTHIQILSELVTRLSNEDYMNMLLNSK
TKKELFNNLDIKEKKEQIKEEIRIQNESKKIVLAITACPAGIAHTYMSAEALIKAGKEIGVDVYVEKQGA
NGMVDPHTPDIIKKADAIIYATDVAPKNTERFEHLPNIKTSVAAPLKRAKEIIYEALEVAQKQGKGDYIE
KSSDISYCEKSSWKKDVKSAILTGVSHIIPLIVAGGMILAFAVLASQAFGLQELYNQEGSWLWQLRKLSG
GMLGTLMVPVLSAYMSYSLAEKPGLGPGFAAGLAADLIGSGFLGGMLGGLLAGYIVKFLKKNIPAKGTLA
GFVSFWVYPVVGSLVVGLLMLFVIGKPVAALNNGLINWLNGMTGINAILLGAIIGAMVSFDLGGPINKAA
YTFAIGAIASGNFIPYAIFASVKMVSAFGVTIATVLGRDLFSESEKEIGKQTWILGLAGITEGAIPFMIE
DPIHVIPSLVAGSAITGSIVAFFNIGLQVPGAGIFSLALLEGSMSGFIIASIWFFAAVLGAIISAILLII
TRKQKNQRKIH
>gi|260688268|ref|YP_003219402.1| phosphosugar-binding transcriptional regulator [Clostridium difficile R20291]
MNNKIDGGETMEFYERAKKYEYKFTDTEDMIIEYMRKNKEEIVKLSIQSLADKFFTVPNTIVRLCKKMEY
DGFSQLKNNLKEELKNEDKEPKNGFESDIKKTLELIDYEKINKVADIIQKSRSIIVYGIGQNIPLCEILV
KEIRGGHDNITYYSQRHEVLHDIGKLGEQDMFFALSLSGETKEVIEAAKTAVNKGCKVVALTHICENQLQ
QIADISLYCYSTIKQVNGYNISDKVPIMMIMRAIIEQYWLR
>gi|260688269|ref|YP_003219403.1| putative cellobiose-phosphate degrading protein [Clostridium difficile R20291]
MHKMKKLVVRADDIGYSEGVTLGIISSYKNGIVTSAGIMVNMPFSRQAIEMVKNDDVCFGLHVNLVIGEP
CCKEHIKIKNLLDEGGKFVSSKIRRTQLLTGKEVFNYEEVYEEVCAQIETYKLYMSKLPEYIDIHGIEED
VSISAMCDAAKEYGIPSCPYYLDSCISMPSKYPQNDFYKLNKSFVKLFEEKYINLDKDITLMVTHPGFID
YSLIKSSSLIQERVYEHAMLCDKEVKMWLKRNNIELVDFKDIFKSNNYI
>gi|260688270|ref|YP_003219404.1| PTS system, IIabc component [Clostridium difficile R20291]
MKRFLNKMMQQLSLLGKTMLVPIAVMPAAGILGLLFGPNMLNVPAISNISNIVFSNVDYLFLLGAVSAYS
KSKDKTSVMVAAVVAYMIFKSNLELLNDTLNAGVFGGIIVGACIAWTYNKTYKVKVPAFLSFFAGEKCVI
TLSPVVALILSYIFSLLWIYPQAAMNQFGFWLGGAGAIGIFLFLFCNRALIPTGLHQVLNAYILFEMGEY
TTSTGEVIRGEIPRFMAGDPNAGFFWTGFYIIMMFSIPAISYAIYKTAQDKKKQEVKGAMTAGALTSFMA
TVTEPIEFSFLFASPKLYIIHSFYSGLGGVVLYLLGARLGSFNGASIIDYVLSFSYGDKAWLVIPVGVVF
FVLYYVTFKYIIIKDNVQTPGHEVEIEIGDKVSEKEKNLKLSHGNFSYMAKQIIKNCGGYENIVTLNNCM
TRLRLEVKDATILNDDNIKKTGAKGVIKLSNTSVQIIIGTDVVKVKDEMEMQLDELRKQADA
>gi|260688271|ref|YP_003219405.1| GntR-family transcriptional regulator [Clostridium difficile R20291]
MAKNKFSEIYEVLKEEILDGKYTSNMMLPTELQLIERFSCSRNTVRRAISQLNTEGYVQSIKGKGVVVLE
NSCSNDFFLNMHNFKGVESIVEDKKVNTATSVLHFSKILIDNKLSKKTGFKVGSEVYYLHRLRYIDNIPK
ILDINYFLCSIVKDLDVSIAQGSIYKYIEECIGTKIVSSRKIFKIEKATELELKTLPLNDYNCVGVIKNS
VYTDDGKLFEYTESKHTPETFVFMDVTQRY
>gi|260688272|ref|YP_003219406.1| trehalose-6-phosphate hydrolase [Clostridium difficile R20291]
MKNWWKKATVYQIYPKSFKDSNNDGIGDINGIIEKLDYLYSLGVDLLWLTPMYVSPQRDNGYDIEDYYNI
DPKYGTMSDFEKLLKEAHKRDIKIMMDMVLNHTSTEHKWFKESKKSKDNPYRDYYFWKDAKPDGSVPNNW
ISRFSGTAWKYDETTNQYYLHLFEETQADLNLENEKVREECYKVLEFWADKGIDGFRLDVVNLLSKTPGL
PDDPITGPKGDGRTHYADGPRIHEYLHNMNQKVFKPKNIVTVGEMSSTTPEECINYTRENREELSMVFSF
HHMKTDYKGGAKWTNEMFSLDKLKKAQSDFQYKMYEGKGWNALFYSNHDQPRALSRFGDDRFFRQESAKM
LAITLFGLQGTTYIYQGEEIGMTNAYFTKIDEYDDAESKNAYYHMIKSGIDEKEALLILQQKSRDNARTP
MQWDNTIYKGFSNHKPWLKVNNDNISVENELNDSRSVFYTYQRLIKYRKQYDIFTEGTYRLLDENHKNLF
VYEREYKNQNLLVISNFTHDNVVYKLPETYLNKLNYTILETNYTRDIIENKMEIKPYESIMIYYK
>gi|260688273|ref|YP_003219407.1| putative amino acid permease [Clostridium difficile R20291]
MEKGIKLGFWSIVLLGINAIIGSGIFGLPGDAYTDIGPASILVLVFCMLLAVSIALCFAEAGSWFDTDGG
PYLYAKEAFGDFVGFEVGFMKWIVSMIAWATMANFFAVTLSSVWPQAAEPLIKNIIIGILVVGLGIINFM
GMKQSKHLNNIMTIGKLLPIVLFIAVGLFFIKGSNFTPFVIIQKGQSASSAFVAVSITLFYAFTGFESLA
VAAKDMENPKKNVPKALVMVMFVVSVIYMLILGISIGVLGNGLAGSATPVADAAIKMLGPIGGYIITIGT
IVSVGGINIASSIFTPRSAAALVEQGLMPKSIRKTNKNGAPYIAIIVSVIGTLLIAWSGSFTTLSQISVV
SRFIQYIPTCLAVLILRKKYADKDVNFRIPGGAIIPIFAVIISILLLIKAGIDEPMKIVWGLGGMIIVVP
IYFYMTKVYSKKYNDVEVK
>gi|260688274|ref|YP_003219408.1| putative glutamine amidotransferase [Clostridium difficile R20291]
MKKLVKKKYPIIGISGNLLIDEGGMFPGYERAYVNNDYIQSVVMCKAIPYIVPIVYDDEIIKEQVSNIDA
LILSGGQDVNPLIWKEEPHNKLGAISPKRDSFDMKLLKHALDMKKPVLGICRGEQIINVTEGGSLYQDLS
LIEGAYIKHNQQHLSNVPTHTVQIKEGTKLYEILGEKEVLVNSFHHLVVNKVAPGYIVSATSKDGLIEAI
EKEGSEFVIGIQWHPEMMTRDYDNMKKIFMAIVKEASK
>gi|260688275|ref|YP_003219409.1| putative sigma-54-dependent transcriptional regulator [Clostridium difficile R20291]
MKTIAVVTDGLSKLECFLNKNLEMIFKDKVMIKNYYLNKITEKELIKDDIILVMIDDRVLKIKKYVEDVS
KIITINRSIKQKDIYKLFSLPEEIDVLVVNDNKHTVLETISNLYNIGINHLNFIPYNPNEEYRNIKIAIT
PGESSLVPKYIEEVIDLGHRYIDSSTFIQIIAKLKLDDKEITERLIKYTDEIISLYSGINTKYKELTIKA
DELNSIINLSNLGMAMVSDKGNIIICNNSLRDILDIQSNIIGKNIDELENENIKKIFSLSKAHDEVIKFN
NKYLNVNKYNIESFGRVTGYYFCIQEITYIRKLEQNLSKKLREKGQVARYTFDDIKTVSTKMERTKKLGM
KIAESDYTILITGESGTGKELMAQSIHNASPRHSQSFIAINCAAMPENLLESELFGYEEGAFTGALKGGK
KGLFEQANNGTIFLDEIGDMPIYLQSKLLRVLQENQVMRVGGENVIDIDVRVIAATNKNLLEMIKGDRFR
ADLYYRINVLPINIPPLRERKEDIEVMLKHFMKRKRAISQGVQDIINAYEWPGNIRELKNTAMYINIMSS
EDVILINDLPHNLLNITEDFSKEISILKDRTSIEKVKLVMECLKNANNLNKNIGRNGIVNSINELGYSIT
EGEVRGILNMLKELDLIICESGRKGSELNRRGKNILNSI
>gi|260688276|ref|YP_003219410.1| 6-phospho-beta-glucosidase [Clostridium difficile R20291]
MVLRKDFLWGGATAANQCEGAWNLDGKGPSCSDMCTGGSQKVSKRITRVIEKGTFYPSHEAIDFYHRYKE
DIALFAEMGFKVFRFSIAWTRIFPTGMEKEPNEAGLKFYENVIDECLKYNIEPLITISHYEIPFAITEKY
NGWVSREVIDLYMNYCETIFKRYKGKVKYWLTFNEINSATMPMGGYLSQGILNEGTTDFINQVDIPQLRF
QGLHHQFVASAKAVKLAHEIDSNYQVGCMQIFATMYPYTCNPDDAVKTQRDSRVMNYFCGDVQVRGEYPT
YMNRYFGENNIEIKMEKGDLEILKEGCVDFYTFSYYMSTCVSSDSKEDNTSGNILGGVKNPYLKSSEWGW
QIDPEGLRYALNEIYDRYRIPMMVVENGLGAYDKKESNGVINDDYRIEYLKAHIEQMKEAVEDGVDLFGY
TPWGCIDLVSASTGEMTKRYGFIYVDKYDDGSGDLSRIKKKSFDWYKQVIESNGERL
>gi|260688277|ref|YP_003219411.1| PTS system, IIabc component [Clostridium difficile R20291]
MRRYEQLSKEIIENVGGKDNISSLSHCITRLRFKLKDESIANDDVLKKMDGIVTVMKSAGQYQVVIGNHV
PDVYEVVCDLAGLGGDTIDNSDSDAPKGLLNKFIDIISGVFQPILGVLCAAGMIKGFNAVFTALGLYGET
DGAYIMLNAIGDAMFQYMPIILGYTAAKKFKLKPFIGMLIGAVLCYSGIQLDTLASIGQPLYNLFTGTIF
ESPVYITFLGLPVIAMNYTSTVVPVIIIVLLAAKLEKVFAKIIPDVVKNFFVPMAVLLVSLPLGFMVIGP
IATYASNIVGNGFLALFNFSPILCGVLTGLLWQVLVIFGLHWGLVPIAMSNLMTMGFDTILVGAFVPSFA
QTSVVAAMYFKLKDKKIKELCIPAVISGICGVIEPAIYGITLPRKTPFIYSCVGGAVAGAVMGIMNVKSY
VMGGLGIFGIPNYINPTTGDMKGVYATIIAIIVAIVVGFVLTLFFWKDDSIVEISKDNNGQGVVEKNKRE
VVYSPIKGEVKALEQIQDAAFSTGILGKGVAITPKEGKVVAPFDGTIMTLFPTKHAIGIISDNGCELLIH
IGLNTIQLEGKHFKSFVNQGDKIKKGQTLITFDIESISKEGYCLETPVVVTNYSDYVDIIENTQKHVNNS
QELITVLA
>gi|260688278|ref|YP_003219412.1| transcription antiterminator [Clostridium difficile R20291]
MIIEKILNNNVIITTDENHKEIVVMGRGLAYKKRTGEHISKDKIDKIFKLSDPNISDKFKELIADIPIRY
MELSDEIILYAKEKLGKRLNDSIYISLTDHMYTAIERAREGVSVKNVLLWDIKRFYKSEFKIGLEALDYI
EKKFEIRLSEDEAGFIALHIVNAQMDQSIKTIYEITQIIQEISNMVKYHYRIVFDEDSVYYHRFITHLKY
FAERIVSNNLHENNEDDLLNVIKVKYKNAYKCIEKLDEFIHKKYNYDLTDEEKLYLTIHVERVVSKSIKS
DINPNN
>gi|260688279|ref|YP_003219413.1| putative amidohydrolase [Clostridium difficile R20291]
MIESIKKRAYEIENELGKEIEEVCNFIFNNPELGEEEYISSKYLVEKMKEYGFDTVYPYCNMETAFRAEL
GDNDGPTIAFLAEYDALPGYGDNKEPAHACGHNWIAASTLGACIVLSKLKENFKGKIVLIGTPAEETTGG
KCDLVKAGAFDDVDVSYQMHIEAFNNINCKALAIDSLEFSFEGVSAHAASHPHMGVNALDAVQLTFAGIN
ALRQHVKSDVRIHGIVSNGGEAPNIVPEKAACKFFVRAAERSYLDEVTKKVINCAKGAELMTGAKLSYRY
FENSFDNIINNKVLQKITKNNLIESGITDILEGKDGPVGSTDIGNVSQVCPTMYTEIALDISPMVYVHEK
EFLNYANSEEAYDKLHKAVKAMVGCALEIYLEDGLLDEIKKNHLN
>gi|260688280|ref|YP_003219414.1| putative C4-dicarboxylate anaerobic carrier [Clostridium difficile R20291]
MSSLKKKKFTMPQTLTIIFSLIVLMAILTWIVPSGNFERVDIDGRSVVVAGTYEKAPSNPQGITDVFTAP
INGFIDAAEVVGFVLIVGGAFGIVNKTGAIEAVIAHTVNKMKKFQFLIIPISMILFGLGGTTFGMSEETL
PFYMIFIPLMTSMGYDSLTAVATVFIGATAGFGAATTNPFSVGIAQALSQIVPGSGIEFRVVMFIIYMAI
SIGFVMMYANKVKKDPKKSLVHDISLNQESMVNSDTNIKEFTKREAMVIAIFTIGMAIMIYGVLRLEWYI
TEIAMIFTAIGIISGIASGLKQDEIVNSFISGAGDLITAGLCIAFARGIVIIAENGFIIDTILNSAANLL
NGLPKTIFINLTFLIEGLIAFLIPSASGLASLTIPVLAPLGDLVDVSRQMIVTAYQFGIGVTNLITPTSG
VLMGALAVANIPWSKWVRFVIPLMVVLTILVMVFLTIGLYLGF
>gi|260688281|ref|YP_003219415.1| PTS system, IIbc component [Clostridium difficile R20291]
MKDKLQVLSGAMMIPVILLVVAGVFIGLGSAFANMENVSALGLSGLIKEGSFINVFFKVINDLGFMVMRY
LPIFFVTGIAFGLSKKEKGWGALGGIVLFIGMHTVISTLLASNGINSDTVTAEAFMASGLGEAEAYSRSS
LYGSFLGIFSYDCSIFGAIIAGFVASAVHNKFVDIELPSALSFFSGPRFSMIMMFIASIVLGTAMYFIWP
PVGLALSKLGNWIGSSGLLGTFTFGAMDKALLPFGIHHLIAFPIEYTRVGGTMEVGGAIYEGVNNIRLAQ
MGDPDTLSYITRNFTTGRLLIHFAILPAAALAMYKLADNANKKKAISILIPAIVTAMLVGVTEPIEYTFL
FVAPLLYFVAYVPLAGLTYVFTEMFNVSIMGESFRNMFPNLLQPQKVDALPLLFLIPIFFIVTYIIFTWA
IKKFDIKTPGRSSEEVKLYSKKEYRERQSVDAGKTAYNNAVEEEVDDKDTKLVHSIIEGLGGSNNIKNVT
NCATRLRVELNSIDGFYEDGFWVNELGASGVVKKKNSVQVIFGPRVITIASKLKAVLGVD
>gi|260688282|ref|YP_003219416.1| putative dipeptidase [Clostridium difficile R20291]
MIVNKELIIDYLKSNQENIIKDIRSLVEIPSIRDESTTDINQPFGIEIRNAFDKLIQIAKDKDFVVKDFD
GYAIHIEYGEGEEVVGVLNHIDVVPIYNKELWKSKPFKVCQKDNYLYGRGVNDNKGPLIGILYALLFLRE
LNEKPKRKIRLIVGGAEETTWECMEHYFSVNEQPKFAFSPDGNFPIVNGENGILYFNLRKKIDKDKFRNH
NLVDIKSNKEDGFVCDKIEAVFKTDDKKDLVESLAYYTEIEELEEGKVLVRYTGERALSRNPHRSYNCAF
SLAKDLEKIKKLNDKGVIIRDILNSYFTDDNHGKKLGIYKEDVDMGVSTICIMSIFLEKNELNMKIDFRY
PKGISWEFITNRINEIGKKENLIVDIYKDLKLLYVKPDSELINKLSSAYKQGFGKEAELFTKGAASYARV
LKNGVAFGPTIEGDNPNSHQANENISIDTLYKAIEVYIYALYSLAFQ
>gi|260688283|ref|YP_003219417.1| putative PTS syste, IIa component [Clostridium difficile R20291]
MFNIFKKKENKIEKIYSPFKGNLVNLEDVPDAVFAQKMMGDGVAIIPNEGKLYSPVDGEIVNVFDTKHAI
MIKSNDNTNILIHVGLETMSLEGKPFDVKVKAGDKVKAKDLIMEVDLDFITSNDLNIITPVVIMDDADSV
KRTVKDRIEPGNVDINSIIMEVE
>gi|260688284|ref|YP_003219418.1| putative hydrolase [Clostridium difficile R20291]
MRYKLICTDMDGTLMGKGFEVSEENIKALKEAMEKGIKVALVTGRPYNAMKYFTSVLGDDIYIISTNGTY
FKLMGYEYKKVLSKEAIKKIYTIGEKYNLNKHFKGCKIVISNNEIGEEHPYRLINSKNKEEDRIEIIENA
SCETLLEKADNEILKCILFSENVDSLREAKEEFKKQEDLEVVSSGKINFEVMSKGTSKGIAVKKFCDILG
IDSKEVICIGDNENDISMIKFAGLGIAMGNATDEVKSMADFVTDTNVNDGVAKALRKILS
>gi|260688285|ref|YP_003219419.1| alcohol dehydrogenase [Clostridium difficile R20291]
MINFYQPSRINFGQGTLSELPRIIGKYGKKCLLVTTPNVEPLDKLYKRVTLNLIEKGIEVVHFDRVEPNP
TVELINEGFELAKKESVDVVLAVGGGSSIDTAKVLALTFGLEKIDWDYMFSTYTNPFKIYDKVSEKELPL
IAVSTTSGTGSQVTQAAVISRGSEKNTIFHQNCFSKECIVDPELMLTLPERITASTAFDAFTHAFESYIN
PNANDFTEIMSEKSMELVINYLPKVMEDKNNIEYRTKLAVADTLGGSSLANAGAAAPHPLSEIIGGVTHI
PHGEALAIVFPKFAEKFYKDNIEKFAKVARMLNQELEKVEDDEAAKTLGNEIESFLKRVGLKTKMSEFNV
TKEQLEQITSCPVLGFLPFGKKEDLVEILEKSY
>gi|260688286|ref|YP_003219420.1| putative phopho-sugar aldolase [Clostridium difficile R20291]
MKYLIDSANLDEIQKCLKYGFKGITANPSMYLKEKVNFHEFIETCTNLNPEILTAEVIGNNLYELINSCD
KILNINKNTIIKINFSEVGLELINILNSKGVKTACTLIFNVNQASLAINAGADYLFPFIGRNDENGNDGI
KNLTEICNLISINGYNTKVVAASIKNVFHLTQASLCGCDYAAVTYDLFKKASFNQLTVDGANTFERDWSK
VNK
>gi|260688287|ref|YP_003219421.1| putative transcription antiterminator [Clostridium difficile R20291]
MNKRLLDIAELLLNSSDYITVDTIAEELKVSNKTIRNDLVILDEWLLEFNLSLDKKTGSGVIILGNEDIK
LKVIRDINDKSNCIYAYSPEDRKRYILSKLFIKNSKFRIRDICNELHVSRATVHKDLVVIQNFLQNFKVT
LVRKTNNGVYLEGKEKDIRKAVFELATVNKSYTELKEILFSNSNECKDTPSTKIFKELFNYDFEKLSQIT
LHTLQVEKSNLSDEYYINFLIHIAICIKRISIKRYINLSEGFFRELLEHEYFEKSKILCANLSEAFDVEF
IDEEVCYILLHIEGLLKSIKKTTTLEPLKNEEITEYNLSEAIAVHWGSILNLNLKDDLILIKSLANHLKS
VLHRINYGFTITNPILNDIKRTFPYTYKAAKESNTVIKQLMNYEVNDDEIGYLALYLISAIDRSKSPLNT
ILICHCSDGVSNLLVQKLSFEFNQINIVKSIPLSSISFTNFDDVDLILTTAPVDFEHNAELININALLSK
NDISRLSTIIKKLYSEKNKILSYK
>gi|260688288|ref|YP_003219422.1| hypothetical protein CDR20291_2946 [Clostridium difficile R20291]
MKKEMIKDYLLITISAFLMALAVNFFFAEHTLAPGGITGLSVVLSTFLSMPVENISLGISMPLLVMGLLF
LGKGFGIKTLYITLMGPLFLKVIPQTHITDNLLVAGVIGGLLVGTAIGIAIIRGCSTGGTDLVAMLINKV
IKFLKLPVILFMLDGFIIVASGIISKNFMISIYSLISLLLIIKTIGFVTTKFGKNTEEINNINNACAQ
>gi|260688289|ref|YP_003219423.1| putative pentose-5-phosphate 3-epimerase [Clostridium difficile R20291]
MKHIKIAAGLAHVNYGHISAVVKEAMDAGVDYVHSDAADMHDLKNMQLMGGHQIIEAIRPVTDKPIECHI
YTRDCDRLFIEKIAAAGCNLLIIPAEHFLGAPLAYIINYCREFGMKVGLTIGCYTPLCFVDEAIYDIDRL
QIVVHGVDETDGKDNWGWRKSAVDLVKRARKMIDEKNPKCELAIDGGLRADNMEPLIECNPDVVILSSAI
FKDKDGITAGVKNCRKAIDEAATKFGLE
>gi|260688290|ref|YP_003219424.1| putative phosphofructokinase [Clostridium difficile R20291]
MKGRCKMRNCIIAQSGGPTAVINASAVGIYEKNLETKYFDKVYFGINGIEGILNKNIIDSDSLNKDNVLN
LKQTPSSGLGSCRYKLADYKINSYDYDRVINILDEYEIDTLFYIGGNDSMDTVMKFSQYCKNTTCKIKFI
GIPKTIDNDLLGTDNCPGFGSAAKLISTLIMETYLDFSIYKNNGIFIVETMGRDTGWLAASSSLARLNDT
PLVDLIYLPEIDFYEDKFIEDVRKIFKEKNKAYIVASEGIRDKYGNFICEQKTSAHDKFGHSQLGGVSNY
LKNLIVSSSITTRVKTLELGVIQRCAMHLASDTDLKQAAEVGAYGIELSKKGYTGVMAIINRTCNNPYKY
EVSHTDISKIANKTKYFPKEWINEECNYITDEALNYLYPLIQGKPDIKYKNGLPYFSIIY
>gi|260688291|ref|YP_003219425.1| transposase-like protein b [Clostridium difficile R20291]
MIVVEKAYKFRMYPNKKQQELINKTFGCCRFVYNKYLAKRIEVYKNDKETFTYKQCSSDLTNLKKELKWL
KEPDKFSLQNALRDLDNAYKKFFKEKVGFPKFKSKKINRFSYKTNFTNGNIMYCGQHIKLPKLGMVKVRD
KQVPKGRILNATISKEPSGRYYVSLCCTDVDIGVFENTNNQIGLDLGIKEFCISSCGEFIENPKYLKKSL
NKLAKLQRELSRKTIGSLNRNKARLKVARLQEHIANQRNDFLQKLSTKLIKENDIICIEDLQVKNMIKNR
RLSRLISDVSWSEFIRQLEYKANWHGRKIVKVGKFFASSQICNKCGYKNEEVKDLNIREWICPSCNETHD
RDINASINILKEGLRLITIQNK
>gi|260688292|ref|YP_003219426.1| putative amidohydrolase [Clostridium difficile R20291]
MKNFFKEAQSIEGEIIRWRRYLHENPEIGCNLPKTVTFVTSTLEKMGYSPKLTSNNGIVAVLDSENGGKT
LLLRADMDALPIMEETDLPFKSKNKDASHSCGHDNHTAMLLGAAKILMDNKHLLKGRVKFVFEPDEESTR
GAKSMIDDGILENPQVDAAMAFHSMVGKFLNTGQVAYSRGPAMASADIFEITVEGKATHGASPEFGVDPI
NIMSHIQIALNTILSREKPQKEPVVLTIGMFNAGNVPNAIPNKASMSGTLRTFDQFVREKLKNRIIEIST
GIAKSFGGNAKVEFKMGTPAVINDLDVGDEIVSYVKEIIGNENVIDFPSAMGSEDFSEILLRVPGVFLWI
GMGSISQGYNFGMHNPKAIFNEEGLVYGSALFAHCAVKWLENNFSR
>gi|260688293|ref|YP_003219427.1| putative amidohydrolase [Clostridium difficile R20291]
MIGSISINEIDKKRFKLDDLSKKIWENPEKAFKEFKACENTANFLRSEGFDVEVGVGGLATAIRASFGSG
KPVIGFMGEFDALPGLNQKVSTKQEAFELSAYGHGCGHNLLCTAHVGAVVGLKREMLENNLSGTIVFYAC
PGEEQLTGKGFMARGGAFEGLDLAINFHPNKISEATIGTSTAVNSVKFHFKGKTAHAGSDPQNGRSALDA
VELTNVGANYLREHVTSDVRIHYTITDGGVAPNIVPDKASVWYYTRALSREAVESTYERLVKVAKGAAMM
TETEVEVEFLGGCYNTLNNHVLANLVSECMNEIKQEPWTREELDFAAELDRQSPQQYKAMISKYNLPEGT
HLYYGGGNVTNFNSYGSTDIGDVMHIVPTAYFFTGCTNLGAPGHSWQFTSCAGSSIGEKGMIYASKIMAM
FGAKILNNPEIAKKAKEEFDKSMNGKTYKCPIPDDIPTP
>gi|260688294|ref|YP_003219428.1| hypothetical protein CDR20291_2953 [Clostridium difficile R20291]
MENFWNPLTCFTVCVMIYAFSEFLSKKTKGAISTLLFVCIIFLLGFWTNVLPKDITGASGILAAMSNFGI
ALLITNLGTLINLEDLCHEWKTVVIALVGIVGIGVGCLTVGSMLFGREYALIAAPPIAGSTVAGIIVTTV
AEAANRPELAAFVILVLSFQKFFGIPITTYCINKELKFKRDNGDFLKDESKSNFRLPSMRIFKEDLGKKS
STLVYLAKLSFVAMIGNFVGLATLIPGFTPANYYLNPNIACLLVGLIFTRIGFLEKGILDKSQSNGIIMF
GCMLMLPGGLAKVTPTALFGMIVPTIGILVVGSVFIILFTAIVGKLLGYSPRMSAAIGVTCMLAYPATQI
ISNEGIDAMEGTEEEKQRATDYLLPKMIIGGFVTVTIASVAFASIIGPIIFG
>gi|260688295|ref|YP_003219429.1| 6-phospho-beta-glucosidase BglA [Clostridium difficile R20291]
MNIKDTFFWGGSIAAHQCEGSWDSDNKGPAIMDFVTKGSYETPRVITDKIEEKLDYPSHNGIDFYNRYKE
DIALFKEMGFSALRISIDWSRIFPNGDDENPNELGIKYYEGLIDTLIENNIEPIVTLYHFELPMNLVHKY
GSWNNRKLMDLYLKYSETVIRRFDDKVKYWITFNEMNHIDPQTEHSDIFTYMIAGIKYSEIENKVQTLAN
VGYNMTLAGVKVAKLAREINPNNKVGCVFGLNPIYPYNCNPSNVLNAFLDNDRDYYQIDAMCNGKFPQYK
LKEYEKNNITIEVTDEDKKAFKEGKLDFIGLNYYFSSVSTPKENLSGDKSLFGGIQNPYLEQSKWGWAID
PIGLRFTLNYIYRKYQLPILITENGLGAYDKIEEDGTINDDYRIEYLSKHLSQMKSAIEEDNVECFGYLM
WGPIDLVSATTGQMSKRYGFIYVDLDDEGKGSFKRYKKKSFDWYKEVIKSNGEVLDFSTDIVVG
>gi|260688296|ref|YP_003219430.1| PTS system, beta-glucoside-specific IIabc component [Clostridium difficile R20291]
MKYKDLNENIIKLIGGKENIKSVAHCVTRLRLTLNDRSIAQTEEIKKLKGVIDVVSNDVAYQIIIGTHVV
DVYNEFMSMIGLSSSESSIKSERKKGIRGIKGIFNSIFVVVSETMTSVIEVLLAAGILASILALLNMSGI
LQSDSPTYQILDTLRSATFHFLPVLIAIASAKRLNVNPYIAVVLAVTLLSSSIDGVEGLSLFGINLQATT
YANSFIPILLGVWAMGIIIEGLKKILPKALHYFLVPVLSLIITLSVTLTVFGPIGMWIGDGLNYACMFLI
DTLGNWSVVALYAALQPLLIVFGAANFTMPISLNSVTTLGYDPIFMGAATISDIAVCGAMFGYFLKTRNK
EQKQLFGTVSFSALMGVTEPSVFGVFMKYRRPFVAVMIGGGIGGLIAGLAQVKTYGMVWGLAALPTYLVG
GEASNFTFMIISVVVSFVAATAASYLLGIPSDEKEEVKGDNEKELELIINENNSRTISIGNVAKGQVIAL
GEVNDKAFSSGALGKGVGVIPSESKSTVISPVDGTITIVFPTKHAYGIVTDEGLEILIHIGIDTVNLDGK
FFESLVTQNQRVKKGDALAVFESDKIIEEGFDSTIITVVTNTSDYLDVISSNDESEELLTVIV
>gi|260688297|ref|YP_003219431.1| putative beta-glucoside bgl operon transcription antiterminator [Clostridium difficile R20291]
MKIIQILNNNVALVKRGKNEIIVFVKGIGFKKRVGQVINENEIERTYILDSYDMLEHFSYLLQNSDSNNI
VLINEIIEYGEKALNIKSSDYLSLTLLDHLEFLLKRCEKNQFIKSPLVWNVKRFYPKHFEIGMHALKLIG
DSKGINLPDDEAVSIALHFVNMEVNKESHDSTIVELRTLADIVSIIKYHFNVELDETSTNYMRFTTHLQY
FIQRIMSDEASIDEDNSIDLYKQVSQLYPKSFGSVQKIRKYIKSQFNVDISISEETYLMLHINRVTQRLE
AKSDEI
>gi|260688298|ref|YP_003219432.1| hypothetical protein CDR20291_2957 [Clostridium difficile R20291]
MKKYKVIFIVLIIGIISVTGFVVYKNCIKPWKDAETYIDKYMVKQDISKDNIKSITKEKAKKASYEGILY
KVYYKDDPRYEYQYFYSDNYHALYVNKVMLQIYDVENNNKLLRSNEELKSVKYPPIYLKYKPDK
>gi|260688299|ref|YP_003219433.1| putative glycosyltransferase [Clostridium difficile R20291]
MSKIVFFSILAYGHTNPTIEVVRELVDRGNEVLYYSFNEFKDKIEGAGAKFICCDKYLPELLPGDEKKIG
KDFPGLIEMIVDTTISLDEKVCRELKDFNPDCIVSDSLSFWGKLFAQKLNIPYVCSTTTFAFNKHTAKLM
KQNFIEIIRMIFGVRRINKKIKLLQRKGYEVKNFISIVSNDNDTDTIVYTSKEFQPMVETFSSKYSFVGP
SVSKLIIKPKERKRKLIYISLGTINNKNVSFYKNCINAFKDSDVDVIMSVGRSTDIKSLGNIPNNFEVKN
SVEQIAILQKTDVFITHSGMNSVNESLYYGVPMVLFPQHSEQRMVAKRVVHLGAGIMLKEDKSESIKKAV
FQVINDNEYKENATKLSKSFYNAGGSKKAADVILQIICNSRQVDI
>gi|260688300|ref|YP_003219434.1| conjugative transposon site-specific recombinase [Clostridium difficile R20291]
MKQQIYNTALYLRLSRDDELQGESSSITTQRSMLRLYAKEHHLNVIDEYIDDGWSGTNFERPSFQRMIED
IEAGKINCVVTKDLSRLGRNYIMTGQYTELYFPSHNVRYIAIDDGVDSEKGESEIAPFKNIINEWVARDT
SRKVKSAFKTKFAEGAHYGAYAPLGYKKHPDIKGKLLVDDETKWIVEKIFSLAYQGYGSAKITKVLREEK
VPTASWLNFTRYGTFAHIFEGKPESKRYEWTIAHVKAILKSEVYIGNSVHNMQSTVSFKSKKKVRKPESE
WFRVENTHEPIIDKEVFYRVQEQIKSRRRQTKEKATPIFAGLVKCADCGWSMRFATNTANKTPYSYYACS
YYGQFGKGTCSMHYIRYDVLYQAVLKRLQYWAKAVQQDEEKVLNKIQKAGNAERIREKKKKASAFKKAEN
RQNEIDRLFAKMYEDRACEKITERNFVMLSSKYQKEQIELEQQITNLREELSKMEQDMIGAEKWIELIKE
YSVPKELTAPLLNAMIEKILIHEAITNEDNERIQEIEIYYRFIGKVD
>gi|260688301|ref|YP_003219435.1| hypothetical protein; hypothetical protein [Clostridium difficile R20291]
MNDMKFIETLKQKRNVCDYSQSRLAQELQINRQNLNEIENGKTKASKEMKHILLHYLDYCNCTQPFTLTI
DYLRVRFPTTDALEIIKNVLAMKSEYFIHEDYGMYAYEEQYIYGDISVNASKDSSMGVLLELRGMGCRDL
EYVLQVRGIDWYCFLRCCIDYQGVFKRIDLAVNDMGGLLDIEILRERYYANKVWKRSRTHEAVDSGKLSG
THGDTAKTFYIGSKNSSIYFCLYEKEKEQKSKGIKTDIKNRFEIRLKNGKAGQTVEQLVFSRNPEQTIAS
FILTQIDFPDYILWDIFLDNVTTSLPFIMTPVAVNMDKIKRWLERQVMPSLLMIKEIEKKTGANYLEEID
RHTRLTEKQ
>gi|260688302|ref|YP_003219436.1| hypothetical protein CDR20291_2961 [Clostridium difficile R20291]
MNKFLSQIRRIDNEISITRKIINTIFILCFGIVLGTFAKFLDTTASNTLPFIFEYLDISNFFGRFAIWLL
IALYIAIYSHSSIRASLNVLVFFIGMVSSYYLYSYFVAGFFPKNYAMIWLGFTVISPLLAFICWYAKGKS
KISFILSVIIIAILFNFTFIYGWIYFDVYSILEVIVFGCALIALKRNTFRETTYMILSAVVIAVILNMLV
PFHFG
>gi|260688303|ref|YP_003219437.1| predicted enoate reductase [Clostridium difficile R20291]
MERKYPNLCKPIKIGNVTFKNRMFSAPMGGTDITADCTIGSKSTAFYELRAKGGAGAVTISECMVHPETD
GSHAYHLDLKIVDSLASFTYTADAIRRHGAIPSVELSHSGQYSGTYLVDKDKKRGLSQWGVSPSVRPDGL
EIKELTEEIIAEIVESYGNVAALAKRAGFEMIMIHGGHGWLINQFLSPYFNKRTDKYGGSLENRVRFAKE
VLDSVRKAVGPGFPIEFRMSGSELFEGGYDLDYGTEIAKLLESRVDLLHVSAGTYQRGFAVTHPSMFLEH
GCNVYLAEEIKKHVNIPVATIGALNDPEMMEEIIASGKADVIYMARALLADHELPRKVMSNQDEKIVKCL
RCFTCMAERATTSTRRCTVNPLIGRELDGTEVVSVLKPKKVLIAGGGPGGLQAAITAVKRGHKVILCEKT
NELGGILKGEQALPFKYKMYELGNTFGKIAKDLGVEVRLNTTVTKEYVENENVDALIIAVGSEPLVPPIE
GLDGENVVIVNDYYVEKEKVTDEVIVLGGGLAGCEAAIHLAQEEKTVHLVEMRAELAPDANIRHRPILLE
EIERQGIYVYTEHKGLSVTTEGVVCMNKSGNKINIPGTSVICALGQKPRREVVDTLLDSAPYVAQIGDCV
RASTITNAVYQGHHAALDI
>gi|260688304|ref|YP_003219438.1| nitrate/nitrite transporter [Clostridium difficile R20291]
MIILTKKFYLINLSRRRVMNLTQKRWIILIASCFINLCIGSIYAWSVFASPMAEHLNSLAGTTFTAASLA
IVFTVTNSVGPITMITGGMINDKFGPKKVVFVGGLIFGIGMILAGFSKGLPMLILSYGIITGLGVGMVYG
CTISNSIKFFPDKSGLVGGITTAAYGFSSVIMPPVANWIINKYGVTSAFKSIGLVFLIIVCVSSFFIKKC
PADFTPEGWVPPEKKGKVRVVINKNWKEMLSTPIFYLMIIILTCGAFYGLMCVSLASSLATNMIGMTSSD
SAIVVSILALFNTLGRIVAGYISDKIGRINTLSGALVISIFGLLCLLFSREGDVATFYIGIIIIGICFGS
FMGIFPGFTVDKFGPKNNSVNYGIMFIGFAFAGYIGPAVMKNVYSVDGNYQRAFIIAIIIALIGFILTFL
YKYINKIQNLKIENLIKGDIKNGKKISKSM
>gi|260688305|ref|YP_003219439.1| transcriptional regulator, padr-like family; transcriptional regulator, padr-like family [Clostridium difficile R20291]
MRTLKYAILGLLNRNPMTGYDIVKEFNFQLAEFWNAKHSQIYPELKKLVNEKLIVYDIKISGDVLEKKLY
TITEKGKDEFLKWLEKDEPMERTPKDIFRLRMYFSNNLDIDTRLILLEHQLLQHQERITFLYSQMERYSE
VPPLDSNDFGDYIVLDGAIIREQGAIKWLTNCINHHKNLDNTTLK
>gi|260688306|ref|YP_003219440.1| putative flavodoxin [Clostridium difficile R20291]
MILYFSGTGNSRYVARKIAQELNDELISLNQLIKEEKTDELISAGKPFIFVCPTYAWRLPIVVTDFIKET
KFLGDNRVYFVMTCGGDTAKSINYIQKLCKYKEWQLKGMAEIKMPENYIALFSTTDKETSKQMIKEADKQ
IYRIISDIRNENEFETITPSGLGGTIKSGIINTVFYKTIISAKGFHYTDKCIGCGKCVELCPLNNINLKN
KKPVWKNSCTHCMACICGCPTEAIEYKNKTQNRERYYLE
>gi|260688307|ref|YP_003219441.1| ArsR-family transcriptional regulator [Clostridium difficile R20291]
MEKECQQRMQEITSKFKECRKAISAMGDETRQLILIALLESDFNGIRVGEITKKTHLSRPAVSHHLKILK
EAEIVNLRREGTKNYYYLDSKKSQWKSLTELINLIFVGIQHISENDIRKGD
>gi|260688308|ref|YP_003219442.1| putative nitroreductase [Clostridium difficile R20291]
MNMKYQHIIEVDKELCIGCGLCKNDCPVNNIIIENKKSVIKKQDCLMCGHCAAICPTKAITLTGFDEPPI
ELTNKPKLDSDELLMAIKSRRSIRKFKDKEVSSEIVKQIIEAGRYTPSAKNSQDVSYIVLDNKKSIYENE
AVKFFRKIKPIANIAIKYSKEVEIDDNFFFKHAPIAIMIITKDKISGSLAASNMALMAESYGLGVLFSGY
FSDVANNSPKLKKLLGLKRSNHVLTTLVIGYPDVKYRRTAQKEVATVRYL
>gi|260688309|ref|YP_003219443.1| 6-phospho-beta-glucosidase [Clostridium difficile R20291]
MSFKDDFLWGGATAANQCEGGYNEDERGLANVDVCPTGKDRTAVITGKLKMFDFDDEHYYPAKTGIDMYH
NYKEDIKLFAEMGFKVYRMSIAWSRIFPKGDEETPNEKGLQFYENIFKECKKYKIEPLVTITHFDCPMHL
VKKYGAWRNRKMIGFYEKLCNVIFRRYRGLVKYWLTFNEINMILHAPFMGAGICFEEGEDVEKIKYQAAH
HELVASAIATKIAHEVDSNNLVGCMFAAGSVYPYSCNPNDVWEATKLDRENYFFVDVQSKGKYPNYALKY
MEQKGITPEMEPGDIELLNKYTVDFISFSYYNSRCVRTDENADDMAEGNIFTSAKNPYLSYSQWGWPIDP
LGLRITLNHVYDRYEKPLFIVENGLGAKDIADENGYVEDDYRINYLREHIKAMHDAVSIDGVDLLGYTTW
APIDLVSAGTGEMEKRYGFIYVDRDNSGNGSLRRMKKKSFEWYKKVIASNGEDLY
>gi|260688310|ref|YP_003219444.1| PTS system, IIabc component [Clostridium difficile R20291]
MGKYKQLAQEIVNNVGGKENISGLVHCITRLRFTLKDESIANDNVLKNMEGIVTVMKSGGQYQVVIGNHV
EAVYKDVVEIIGLDDSSTSSETKKSGNILDKGIDIISGIFQPVLGIMAACGMLKGFNALFVAMGLYSDVS
GGYMVINAAGDALFTFLPLFLGYTSAKKFGLKPMLGLALGAAVCYPAIQGSSISAGADVMYTLFKGTMFA
SPVYIDFFGLPIVSIDYTGTVVPIIFIVYFASRCEKLFNKFVPDLVKFFFVPMLTLLITVPVALIVIGPI
ATFGSTLISQIVISIRDFSPLLAGAIVGFTWQILVIFGMHWGFIPVYINNVMTLGYDNVMMPFFACTFAS
SAVVLAIFFKTKDKKLKEMTIPNFISGIFGVTEPAIYGVLLPLKKPFIISCIASGIGGAFYGFFNLRKFI
TGGMGIFELPAMIEPDGGMGNLIVALSGIAISMVVAFVLTMILYKDEKVEESKKVRNKGKEEIKEVKSTK
LEREIVASPIKGEVLKLSDIEDAAFASGVLGQGVAIIPSDGKVVAPVDGVVTTLFPSLHAIGILSDTGVE
VLIHIGLNTIQLEGRGFEACIKQGDRITKGQTILNFDVDAIKELGYSTVTPIVITNSSQFLDVVETESKN
IELEDNLITVLF
>gi|260688311|ref|YP_003219445.1| transcription antiterminator [Clostridium difficile R20291]
MLKRRIIMIINKILNNNVVITLDDNDEEVIVMGKGIGYQKSKGNLIDKTKVNKVFRISNKEISNKLQELL
NNIPIEHMKLSSEIIEYAQIKLNKKLNESIYISLSDHTYSAIQRMKEGINVKNAILWEIKRFYKEEFEIG
MKALDIIENKTGIKLPEDEAGFIAFHIVNAQLSEGHTLASDITKLIQEVLSIVRYHFRIEFHEESVFYYR
FIMHLKFFAQRLLLDSAHEGETDKELLSIIKSKYNKEFECVVKIKNFIKKQYNYILTDDELIYLTIHLAK
VVKDSNM
>gi|260688312|ref|YP_003219446.1| PTS system, IIabc component [Clostridium difficile R20291]
MKNKYEEVAQLIIDGLGGKDNIIDLTHCMTRLRFILKDEKKVNADKLKSIDKVVGVNSTSTQYQVIIGNE
VGVVFNAIINKGINTTGDIKSDIKNENKKNSILNNIIDTITGCMTPMIPALTASGMIKVILSLCTTFNWL
SSNSSTYRVLDIIGDVAFYFMPIILAINAAKKFNVNTSIAVIVVGVFLHPNFSAWVSSGDPISFIGVPIQ
GVIYAASVIPALLTVWMMSYIEKFINKLTPSMLKTILNPTLVLLISAPIALIVIGPIGNFLGEGLASIIN
LLQGRLGFIMVCLLAAAMPFIVMTGMHHALTPIFISAFATTGQESLILISQVCANLAQGGATLAVALRSK
DSKMKQLASAAWISAIMGITEPALYGVTLKLKKPAMLASIGAGIAGLFAGITHVTLYVPQNSIMAVLGLS
GEKGISNIVNGLIVIFIALVAPFIMTYVFGVEKNVKESTDNVVEEV
>gi|260688313|ref|YP_003219447.1| beta-phosphoglucomutase [Clostridium difficile R20291]
MKAVLFDLDGVITDTAKYHFEAWHEIAKSLDIEIDETFNEKLKGISREESLDKILLSANKVDSYTKEEKL
KVCEEKNNIYIKLINSLTYKDILPGINELIKELKKNNVKLGIASASKNAPRILESLGIKDEFDCIVNPSL
LERGKPYPDIFIEGSKMLNLKQYDCVGIEDSYSGIKAINAANMTSIGVGKKEVLGKCDHIVEDTSLLNYN
TLLQAWSKKINLD
>gi|260688314|ref|YP_003219448.1| putative glycosyl hydrolase [Clostridium difficile R20291]
MSLIFTTKDQLIEQGFSKDTIKSNETLFTLANGHLGVRGNIEESDFNNEYVDNMGTYVNGFYEESPITYG
ESAYGYAKQNQTICKLPNAHIVNFSIEGDCFDLSKGITSEHTRILDLNEGIVKRSFIWENSRGRKVKVSI
ERLVSQDIEELMMISYTITPLNFNGKIKFKNKMENSMEKFNCEKVDDPRVASINKKQFKINVKKYNNKYF
MNLVTERSRLGLWCGFDSYITCGNITNETYNVSDECIEREIEVYAKKDERLNLEIVVGYSRVYSDLNLNE
ERLKSLECLESLKCLESEAHLKSLELVLREACNIGFDKVKNIQRKKMNEFWTTSDVEIEGDKTLQLGIKT
NLFHIYQSAGRDGKTNISAKGLTGDGYEGHYFWDTEMYILPFFIYTQPSIARALLDYRYSILDASRERAR
ELGINKGCLYSWRTINGNECSAYYPAGTAQFHINADIAYGIRTYFEATNDEEFMMQNGLEILIETARFWV
EFGDYIELKNNKFCINGVTGPDEYTAIVNNNYYTNLMAKYNLIYAVQMVDKFKHNLFSNEVFRKVKLQEY
EVKDWINAAQNIYLPYDEEKKISKQDDSFLEKSVWDFKNTPKEKYPLLLNYHPLTIYRYQVNKQADTVLS
ALLFPDEFSLEQKKRDFEYYEKITTHDSSLSRSIFGMMASEIGNHEKAYNYFMDTALMDINNLQKNTSDG
IHAANMGGTWMSLVYGFAGMKIKKDKLSFEPRIPKHWKNIKFNILFRDNLVSVNIEEYKSYYKLIKGKNI
SILHDNKEIKLSKNIIEVNNCFKGSN
>gi|260688315|ref|YP_003219449.1| putative 6-phospho-beta-glucosidase [Clostridium difficile R20291]
MKLGKDFLWGGAISANQSEGFYLDGGKGLSQFDKLPLNDKRLKDVCLDEDNILNENNQYYPSHIGIKFCE
NYKEDIAMLAEIGFKCFRFSISWSRIFPTGEESEPNEKGLQLYDNIIKELKKYNIEPLITISHFDIPYSL
VEKYSGWADRRVVNLYVKYAEILMKRYKDDVKYWIPFNEMNMIIHIPYIGAGLTFIADENQLQKKYQAAH
HQLLANAKTIEIGRYINKEFKFGCMLAAGKTYPYTCKPEDVFATLEHERHNLFFSDVQVRGVYPSFMNYY
LKSNQIKLIIKEEDLSTLKDNTVDFVSFSYYSSACSSARAEGLEKSKANGPETIKNPYLPKSNSVWQNDP
VGLRITMNQLYERYQLPLFIVENGLGTQDIVNEDGKIIDDYRIDYMKEHIKNMILGVNEDGIELIGYLMW
GCIDVTSVSEGKMTKRYGIIHVDSDDYGRGSFKRTKKQSAFWYKKVIETDGEILFNDMETHA
>gi|260688316|ref|YP_003219450.1| AraC-family transcriptional regulator [Clostridium difficile R20291]
MAIYLEMPKLIHEFPFRSLSNEGEVLTTPHWHKEIEILLITEGVVNLFINDKPMQLKKGEIVIIKGGDIH
YILPSPGSERLVFQFDISFFNDLILLNEEKESLINLFSSIKKCSRDWSAKIRKSVFDILIDIYNEDLYKI
EGYSYAIKGKMYNLIPILYRQIPREIEENTVEYEINSKEILERLNNIFKYVEKNYKQPIKLEDVSYEVGF
SVYYFTKFFKKNTGKTFITFLNEYRLEKAKWILLNNNISIVDLVEEVGFGSTKTFYRVFKEKIGVSPLEF
KKRYNSLEKKGGASK
>gi|260688317|ref|YP_003219451.1| PTS system, IIa component [Clostridium difficile R20291]
MEIREILTEESIILDLKSTTKEGIIQELVDKLYDTGSITLKSKFIKALKHREKIGSTSIGYQMAMPHGKT
KYVKKASIVIGKSKKGVDWPSIDGLPVKVIIMFAMPQSGGNEDMILISKIAYILGGKNISERLLNVHTKK
EILDIFYEV
>gi|260688318|ref|YP_003219452.1| transcription antiterminator [Clostridium difficile R20291]
MLVSRQIEFLKLILNENKYRPIKYFKDKLNVSDKTLQKDLKMIEKYLETFNIKIDIKRGYGILIEDLAKK
NIDLINSLNIQSKENKSLSVEQRRMEILKYLLLNSNNITSINQLADKYYVSKTSIVNDFKYIEAWIKEYN
LKLNKTLEGTKIIGKEVDIRKSIAKMMDDLLDENYEQHDISELTRLDSATFSALINLFDIDSIIFVETII
TELEYNLGYTINQPYYINLITHILICLKRIEEGNQIESQEEREISVDNLDELVYKNVTTLIDKIENRYRV
KITKDEIMYIYIFLVSSGFSSENNSSYNDESDILSESEKVSSIMIENMSQFLNINLKNDDLLQKSLASHV
RPMLNRLRYDIQIKNPLLGEIQERFSDVLGLCMMTINIMTEYDNLKNISIDEVSYLATYFQAAIERNMSS
KRVIVVCHTGYGTSQLLAARLKREFPEWTIVDIVPMHQLSKRNLDDVDFVISTVNLDLKDKLHIVVSVLL
MESDINNIKNALLSKPKKSMNLDTNLLGMYLEDNIYFNFDVAQMESLIGVNLGSKYESISLGKDLNIYIH
KQSKLNKGIMNINNVTRTIDIYLEISNQSFLKNILMEISNLYRQKNYINYIIDCKSKEDIKILFKNNLLE
KTNGN
>gi|260688319|ref|YP_003219453.1| PTS system, IIabc component [Clostridium difficile R20291]
MIGKILRSDCIVLDKQLQTKKDVINYMANHLYHGNYINNKEKFIADINKREKESSTNMGNLIAIPHAKSN
VVNQPVMMYLRTDREITDNDGQKLRSFFMIAVPESGSDEHLKIISKLATYLMEENFLKHLLSAETPYEIL
SIFNNKAAESGDFSNNQNKGLIVGITGCPTGIAHTFMAKKALEEAGQELGYEVKIETHGAIGVENKLTKE
DIKRAEYVIIACDKEVQLSRFIGKKVLQKKVVDAKNVSLAKNLIINAENGMAKEIKPGGKTLEDSKEMLQ
GSETKGVYKHLMSGVSEMIPFVVIGGIGIAIAFMFGIFASDPTHETYNPIAGFFGQLGGDSAFKLFIPIL
AGFIAKSIAGRQGFPPAMIAGFMAVIGGSGFIGGMVAGFATGYIALGVMKITENLPDVLKGVNAVLICPL
LIAFTSGAIMFFVVNTPASWLNEALQSWLQSMSGTNKVLLGAILAGMMASDMGGPINKTASAFGLAMFSS
NIFEPSAALMVGGMVPPLAISLAMLIFKNKFTKEERKSSLPTAIMGASFITEGAIPFAAADPLRMIPANI
IGSCIGGAICMSLDITLMAPHGGIFVIPFACSAPVAYIACILIGTVITALIIGVAKPTIRSENSEVELLG
A
>gi|260688320|ref|YP_003219454.1| putative sugar-bisphosphate aldolase [Clostridium difficile R20291]
MLINMKEMLKVAQENQFAVPAFNIGSGQILKAVVQGANEKNAPVILAIHPNELSFLGDSFVVSCIEEANK
SKVPMVIHLDHGENKEQILRAIRCGFTSVMIDGSHLPYEENVAISREIVEIAKGLNVSVEGELGTIGTTG
TSSEGGTDEIIYTDSKLAKDFVEKTGVDTLAIAIGTAHGIYPKGFKPELKLDLLKEIREVVDIPLVLHGG
SSNPDEEIAQAVKLGVCKINISSDVKSAYYKKCRELLEQNPSLYEPDTIYPPCIKAAREVIEFKMNLFNA
IDKLKCFYKNKN
>gi|260688321|ref|YP_003219455.1| putative abc transporter permease protein y4fn [Clostridium difficile R20291]
MIKKINRSKFTSKNVIFIVLYSILFWILIGYIIIPIGNTFVQAFQGKGGYSFEVFKEYFSNTNNLRVVSN
TIILGLGSVFVCGIMGISLALYMTFVCDKHKKIIHILLLSPMMIPGVIMVIACIQIYGESGIVTKSIEIL
LPFIKKPYDFSGLKGILFVVAYTQYVYFYLNVYVALKYVDYSTVEAAKGMGASKLRVFFDVIWPVITPAV
ITSTIITFASGISSFSAPNLIGGGFKVLSTQIVRSKANNHMDIASVQVITLLLMGILFMILLQYYGKKYG
VVPSLKSQSYKVHNRKKDLFTFVCKVIIEIQIIMIMLPIVTIVYLSFVSTHSIMTTIFPRDFTLENYQMI
FQKSRVLQPILNSFKMSLMAVAVGLIITVPVSYLVIKKDTAYNRLAKFIIMLPWSMPASAIAVNLINTFN
QKSIFAFNESLIGGFYIVPIAYTIYALPLLFSSNEVAMKSINLGLEESSRSLGAGRIKTFYNVIVPNMMP
GIISGAILVFIRTIGEYTMSALLYGVYNRPISISIVTNMQEFKIGVSMAYGVLVIGICYIALGIIFKLDR
KRFT
>gi|260688322|ref|YP_003219456.1| spermidine/putrescine abc transporter atp-binding subunit [Clostridium difficile R20291]
MKNIELKEINHYYGKEKVLHDINISIKEGEFFTLLGPSGCGKTTILRIIGGFIKPSSGSIYVGDKNITNL
EPENRNMGTVFQNYALFPNMTVEENVSYGLKIKKLSKKIIKEKCDNYLELSGMKDFRKKKIDELSGGQQQ
RVAVARSLATEPTMLLLDEPMSNLDIALRIKMREEIREIQQKTGITTLFITHDQQEALAISDRIAVMDKG
KVLQIGVPIEVYKSPLNDFVANFVGTSNCIGKEDYVNFNIEKETKPYIYKRPEEMILLQNTNQSGFVKVK
VESKNFLGAILEYTVSNDGKKYQVTELNRLNNSNKLNVGDMAYLGVLQGD
>gi|260688323|ref|YP_003219457.1| hypothetical protein CDR20291_2982 [Clostridium difficile R20291]
MICRHSLSNKVNFLLCKTFNYSKSTIYMGKEIKMELKISDYKLLCNKGSGAFNEDIVGLSPYGAWVLDGA
TGLNNKNLVSTESDAKWYVSWWNSYLHENMEREDSLKVIIKEGIEEITKEYYKLTDDKEVEAIDIPSCSC
SILKFYKDKIEYLLLGDCTLLVNNNESVKILKDETLCELDKKVFDFMKEAKDATNLTLKERKAEVMRL
>gi|260688324|ref|YP_003219458.1| abc-type fe3+ transport system periplasmic component-like protein precursor [Clostridium difficile R20291]
MKRKIAVVLLTVAMLLSLVACSNDNTSKSDKLEDTLVVYTTHGEDMLGAISEEFTKETGVNVEFINLKGE
LADRVRSEKDNPQADIMFGGDTSTYMQLKEEGLYEKTEPSWNNELDKSYKDSDGYWYGTIKTPVMMFYNT
KLLSADKAPKDWSDLTKEEYKDLIVTRDSLSSSMRSTISNLINYYSNTKSEEEAWKYLEDLNKNIKNYYN
SGSVMYSAIGKGEATISVAVLSDIIENKEKNNMPLEVVDAESGSVVITDCVAALKNAPHPNAAAKFVDFV
GSAKVQAMVANDFNRIPTLDSALKDSPKWMSKEYKAMDVDWSVIGKNQSNWIEKWETDIIDNNKTIK
>gi|260688325|ref|YP_003219459.1| hypothetical protein CDR20291_2984 [Clostridium difficile R20291]
MKKRKVYMYVFDTMSDWEVGYLTAELNTGRYFKKGLKPLKVITVGVDKNPIITMGGLKVLPEITIDELNI
ESNDLLILPGGNTWTSIGHEKILEKSKEALEQRSIVAAICGATLGLAKTGLLDFRNHTSNDLEFLKMVIL
SYSGEKYYKMESAVNDENLITASGIAPLEFTVQVLKVLDVFKEEALSSWLNLYKTHDSKYFFELMNCNK
>gi|260688326|ref|YP_003219460.1| putative transcriptional regulator [Clostridium difficile R20291]
MAKIDNMMSILWMLNSDKKVTAKQISEKLEINIRTVYRHIDALSASGVPIISDTGHNGGYTLLNNFIKAP
LFFDTEEQTALLHAAIFAKEEGSFLDDTLDKATSKLKMYSNQKQEETLTKHLIGFEVIKPTGKISIESVL
KKLKNSIANELSVEINYRTAHEEKSKCRIINPYGIVRWNNNWYIVAFCQMRNEIRSFRVDRISSVIETSN
TFNRPKEFSASEFFIRGIMDETKDEDNLISLVIEGKMNALDNLCQHWLLGYYLKERTSNKAIFKLQEEII
FTYVPNILIPYRKSIQIIEPLSLRDKMVEDLLELINHYQI
>gi|260688327|ref|YP_003219461.1| hypothetical protein CDR20291_2986 [Clostridium difficile R20291]
MPVINKYKIINFKFGMGQERILSNRTMELYGENLQVEAENTAGKTMSIQTIIQSICPLSDVAKPFTAIYN
KKEPLYSMTEWLLDDGKTLLLTGIGFEKKAGSSKEEGKEKKDDLYKYFMFIIEESKEMEVDIDNIPLLKN
NDKGIRIVQPLTASQDYIKMLRDKYGKNKVHFFNNYLRKQHREKLEEYGINQSEWKEIIIKLNSNNKEGG
LSDFVKEHNTSEKLIRDKILPLIETSLTTEEFAPILQIKEQVRKCINNIIDMNEKLSDYKNYRDLNIRVE
SLQNKINRILFIEEDKNNVLGELANLYVHIENKRNELNEEIKQYQKMKASKEEEFKIVEYEEDSYEYFRK
EKEIQDTQVEFDKAKNELNDKIEELELDEQYLNISKFKRKKKGLEEGEKDKIEKESEKQRKEVNQEEITA
IINRLGSSIHYCLKEESIINNEKLKENTNNNIAIQEKKNQLNDDKSKLTKVLISKNSEIKYIEGKERDFN
NQLHEFKLNNTDIKGFISNNFLGEVIDYTRYINYLNIKVKSIEENLESKVMQIEESNKLKDDINEAINNL
KLDNHESYMKLQVLKTRKKDIDNFKEKYKIIKTRFEIDNELDNSTKLYKEVKQELNKMKLQVQDLENNKK
QLEKELEDLQNYKDIIFEEEILTDLERNGIKPIEGMKYLLTLDGDLEYKNNLISKNPLLPYSIIITNKEY
QKLKQINLKNKTKISMPIFVRDNIEDTFITTSSNLVISNGLNILSSFDNKALDPEKREKDMNLIKEQINS
IRDKVEQYKAEIEILEEFKLLTNKIDFTAEDLSIDVKIENYKKIIFEINNKIKSNENNEKNLSNKIKELY
ENKEKLLNNKNILFNKLKDIRNIQDTYSIILENKNEITKLKTSIEKIEEEKKVIKKSIEDIDVNIFNLNS
EKDRINRHIDDTESKINKFKIYEPIKLENAKLEELEIKYKKYLEDPTKKEIETLNYEISVCLKRIESITI
ELEEFRQLISSDNFENIPILFTIEELNKRIVLNKSKVDELRKLKYSIKSDIDKNQGSLNTKREEILKKFN
GKEPLSTSLIVNFNFEERKIDIKKDIKDIGEIIEGNRTTCQNLEQELRDLKKYKVERKAITYQPEDIFIE
SKKLQSKLQNVEYNLIKSINSYKNTILEIKEFNYKHMEKYKNFIETLNVNKDNYSRQKEQVEIVLLVIRE
EISKLEKHSEQLRKEKTIISRQIKDYVMDCIDEFKIINKLGKHKGQALFNISLPKSDKIENSLSLVDMLM
DEIVEEANLGDVEQKINTFYILNKTLNIGRIPVSVIKYEINRNETIKWNSINNETTGGQRFCISFIVTIL
LMEYKRYDRNAIVDESKYKGKVLLMDNPFGETSQQDFLKEIFELAKKFNVQIISYTHVTNASIRAMFNKI
YLMTVEKTTSNKEFVDINEIKQNKTDELVYMSKFYIGNKEELIQEDIFSLI
>gi|260688328|ref|YP_003219462.1| hypothetical protein CDR20291_2987 [Clostridium difficile R20291]
MNISLNDYKIANEIFYRLLKKSELKEKEAKELFLAYINNSNVRYALEAICEVSKIKIILISDTLYLIPNN
DNDIFGFDYRRESLLGKDLKDSYLGYLIMTIIFSEFTNGVAPASYIQVLNLLDLVQESLERSIARDNLEE
IEKSCEFNITILKNYWESKRKWDESSKKGIETTSADFQIGFIRKIINFLKNEGLIVHIEDEDKIKPTRRF
LDLMNNYFLDEERKVLIEKLVLRKGESINASN
>gi|260688329|ref|YP_003219463.1| hypothetical protein CDR20291_2988 [Clostridium difficile R20291]
MEMINILEGYNKRVNCIGSYYLIATLANNRNKFKEFDNIQFYNLLIQVLCYIFDRSLRRKNCLRDDIKDF
IEEINRMDYKIMLSEDDLKDLANYIINGLTNSGKVYLFTYYSLEQEKHIDESIKIIEDKNVKINNQERLS
YSLTTEGYRLLLSTKEYDELFQIQISQMIAKLRIEKGDYQGAKEDIYDIINTLEIHQQKIDNYIKIIKVN
ILYIKEEKYSTVIDTTVETLLEEMDKYEELKKEVKLLIKDKEDYLEKDEDIDKEKIKNIRTQLLQMKELI
DGIVLAKSTATNLLSRVQDFREEFKEILKKLLTTPVIKRFNFKEEILDRLEKDSDFLLIIRELYISLFKV
ELPNRFNIGVAYQEQKLLNTREIENEIVNKDELEIIENKEKEERINYCENYYFDFFKYLIKYGLEKGQFT
LEEFLKNYLKYDKVIYLEITKDSKLMRDIIIYFANQRESINIKKIIRMLENSAFSPNTDFQIERLIERLL
VEDFELLNSVSHIKSNKIFEDEMKINTEINLETMTAVKLEIANIKFEII
>gi|260688330|ref|YP_003219464.1| hypothetical protein CDR20291_2989 [Clostridium difficile R20291]
MITKIKKTYIYLKEIQKIYKINEHKELVHIIKKLINDNKIKPIKTSDLTPQHEQLYTKYRIIKQETEEDK
KILEEINYKICDKLSIDYYRKNLVHYKNNRVAIMDLNSYLIKKSDNLSKKISINERSYEIFKDEKFISSK
VGKEVLKNLKIDLIKDLNVYKTPEPFIYLSINRISPQKILIIENKDTYITITKMLLEGKEILKNKIDTVI
YGEGKKIINSIKGLKEDITIEYLTNKENEFLYWGDIDKTGLSIYTSLKDTNEINNIRLFEVAYEHMIDKT
KENTLRNIPKNQKDNFECGLENINNLNLKESIKNILVQGKYIPQEALNRFDLEEYN
>gi|260688331|ref|YP_003219465.1| hypothetical protein CDR20291_2990 [Clostridium difficile R20291]
MREQFKNSIKNIKSNRPLVSVQDIVNFIDKGEKYLKLSIDEIDEMEILQGIVMSPDYQRTYKSSNKEESS
IIESLLIGIPIPEIFLVKIGVNDMQIRHVMDGQHRLNAIYRYVKNKYPLKNLDILGNDPLYDNKRFSELE
KKDKIKILGSHLSILEFDGFDNPEIEIELFKRYNRNTKPLEMQEIEMATYFSETSKYISKFINTLIKDKY
KDEIDKSEYKYANYKSDLLRIYNITKSRNDKQKNHQEICIIFSILENGLQENIRDGVTASKKFLEYKSIQ
YKNNESEKLELLKDKFDEFNRMILKISEKIEYPFSTSLISDDKQRQSKYLIGVSIVLASICYYYDIDLEN
NYLIQDIKKIISCSPIADIEYKASSTNMKNMILYLFIKNKIQDNKFESLNLKRDKIKEINTLVMNNDGYL
NEQTRLLEIY
>gi|260688332|ref|YP_003219466.1| frg domain protein [Clostridium difficile R20291]
MGEKMQSVICKIFDNKLLISNDLSEQDDVLYEVMDKFIDDIEYISKLGDEQIKSMLMEVNKFEEDSTEFE
LYMKNLCYLKQSYFIDTNDKSEINSIDIDILKNVKIEDLVDITNIKLERNLNINIEHISKAVNKIYEENE
KWKEYNIQNTMSKYIGIPESEVIFISNLSQYVSFLSELDNAGDYVSRGQKDCMYELLPSLHRKYKKDYGI
HSDEYEEAFKQKIIYYDKEIKNRSSEELRAEGQHFGLPTEYLDFTEAHLISLLFAIEDYKYTKQHSIVYF
IDSISYNTDTIKRSEKLVNYSDTSAIDNCSKFSSRSFFIKVGNSNERIHFQKGCFLKVSSEDKGEFKEKL
KKYCKVVVINKDAKKEILKELFNLGITFENIYPDKDNVVKSIKFYYDEIVGGNL
>gi|260688333|ref|YP_003219467.1| transposase, is4 [Clostridium difficile R20291]
MDYEEENNYYICTNEKKLFANKIINRKSKTGYKSEITCYICEECSNCQYKSNCIKRSNSKVPLKNRTKNL
QVSKSFHEKRKENLKRIMSLEGDELRVNRSIQAEGAFAQVK
>gi|260688334|ref|YP_003219468.1| hypothetical protein CDR20291_2993 [Clostridium difficile R20291]
MIAQFTNFLGDNNEISKDTIFIDGTKIESSANRYTFVWKKAVNKNMAKMVNNISDFILKCEIDVGIKIVY
EDKIKIYHLKKLKKISKEANVAFIHGKGNRKSTKNLHIMGERNSCSKTDNDETFMRMKEDHMKNGQLKPA
YNIQFGVD
>gi|260688335|ref|YP_003219469.1| crispr-associated helicase cas3 [Clostridium difficile R20291]
MNNLYEYKAKSDGTSIDKHNEDMNYIMNQLVSIYNISNDMKNDLYEAIVCHDVGKVVKSFQDNIESSTRR
VRHELLSASIKYLNRGQKLAILTHHKDIKFLEGQITNSIYEIELKELKELLDIEVEDIRPFIKEISRARN
DDTRKLENILLKGYLQYCDHIASAGIKSIDKGFNSIKDFSIPKGVSYNSIQEKVLNMDKNEDIMIMAMTG
LGKTATSLYWSNLVQNEYKSKRVYYILPYTASINSLYENLYNRNISVSMLHSKAPYFLNKISDEEDIKQL
YQIYKKSVKQINVCTIFQLVKSVFSCKRFEMLLSQLKDSIFIVDEIHCFDTRVLCYTLEFLKYLKENLNV
KICIMSASIPTCLKKLIQERLQISTIIEPDSKDLIFRHRLNRLSEGILDSIHKIENDLMQGKRVLICVNS
VDLSQELYGRLQKYNPKLIHGRFNTRDREQAEKGIEESFLLIGTQSIEVSLDISYDVLYTELAPLDSLLQ
RFGRVNRRGDNAELSNIYIYDYDRKLNIYDEDIINRTDIVISDIIHNDNSIVDESKVPSYLDNVYLDIDM
DKYNKHKVALEIIMKNMRLGVWNKSANNDMLNNDTISVVPECLLEEYKLYIDKKMYLEASSLFVNVSVKR
YNYNKKMFYECGDIVVTSYSYNDKLGLIFDC
>gi|260688336|ref|YP_003219470.1| crispr-associated autoregulator, devr family; crispr-associated autoregulator, devr family [Clostridium difficile R20291]
MENKNSNRMLNIGYAIEVLCGRLNGSSSEVEKKNNSYKNSTYTKKIGSRSRISSQCQKYNQKLFMEQVCG
YEQNVKTKDGKQVKLVPNPFKYATDDIFGFMMAEKLSIEEDVYKELSDEEKEIYKKNKKKYEVNITKKRK
SRWQMNSLINVSNRKVEWEWNVCGTTGDSMPYQVEVYSGVHTNIANLNIGKIGEYDISDIASEHRDYTTL
EAKSIGVEKLDKEEKFKRIEALLKSLEYLSVEGNKTNHLTDTKPKFVILGEYSWGNNVFQGIIKENGLDV
EMLKESIEQNEEFRKSDIWIGINKFYDDTFNEIEVNNEKEQIKKYLEEEFEEYDFMKISNVHQAFESYLK
YLKETL
>gi|260688337|ref|YP_003219471.1| hypothetical protein CDR20291_2996 [Clostridium difficile R20291]
MDRSYNVFVDNGLYVLAYYLNKDINDITYQDIENSIDLMSDKIEEFVSCEKYSNLKSMCFSNSTLTQPKG
KVTLNEKLKGFVKNQGDEYCSLCGQYKAKVKIEDKEYNIGRSYMPNLVANTFYNFSNNLQGLNVCPYCLV
LTMYSILNCRVSRYAFLYNSTSSEFMEDYTFHIQKENLTDVELGAKKEKEKYSIVKLLESLVCKYNLFNG
DIEQYMFNNSGQSQDIQVNRIKNKYVNLLIKLQEKALLSNFEKLHLDRYILNGTLESNYLREVYRVKKEE
KMDEKEQKNFDELVIFLNREVNVLKKVKIDIIKKLTDKLKTSDLDIDKIYKELKMLGKFYAYEDWLVNLN
EMYYEKTGEKLFEAEDYIELDDIRSFRQIKNLILVSLI
>gi|260688338|ref|YP_003219472.1| crispr-associated protein cas6 [Clostridium difficile R20291]
MHLVRRHLILTVDNEVVLDYNYQYELMKRIYEAIEINDKRKALSLHNEGYKVDKKVFKLFNYTIMFENAK
YLKEGIHLNPQTKIKLILSGYDDILNNIIKGFIKCKVFKLNNIEFKVSDIEEDSKKNFNNITLYKVRSPI
VASLYDLKSRKQVYLNPMQEEFYKALHDNLGNKYKLIHNKEYTGELYFDIEDVLAVKKKYITNIKGKGFI
IGYTDFEIFVQANKDMQEVIYYCGLGEKNSIGMGLLTYITSRRA
>gi|260688339|ref|YP_003219473.1| crispr-associated protein cas5 family [Clostridium difficile R20291]
MILNKIEIIGDMAHFKIPMHSKIQRTYEIPPISTVVGILKNIYGEEIDDFILGYVIYHDGTFKDLQTIYK
EINPNVKTLTDSDRFQTDVCPIEYLINPKLIIYTNIDKNIEFNEPLCLGKTNCLAKVLSLSEIEVNLIDK
KAIGYNQYTDINIGDGMIKRINTLTEYNEKKGYYDIYSSMVRENDEFEYGKYYDEDEQQNIFLWKWKKGG
VIKCI
>gi|260688340|ref|YP_003219474.1| hypothetical protein CDR20291_2999 [Clostridium difficile R20291]
MIIPKLEPNDRKREFNKYSSEQINKVVYNYLFKNNMSNRKIDDEILDLSSKQSKGYQSMGIVHHLGINKN
HKGIFTGYTIDKAIEVLKEDEIHFKQIINILLEIRNINEYPIIVDSWELLDEKIALKTIDKSTLKHNGTG
VPIEIRYFFEINNLGKNEKKNVNFKYNDNYYSAVIEMDKLENPRSRIIWKSKFRDLLRSIFSEYYEKFLE
NKIEGKTNLPKIRFIKLDSNNFNIEFIFTAEIEDDVLEEISQDNPLNINTINIELETEIRKEGKVKYVYG
KQYERNPRNRIEAIKYHGTKCIVCGFDFEKTYGDRGKGYIEIHHIKPLSSVGEESNINPKTDLVPICSNC
HRMIHRKKDNVLSIDDLKQIIKDSK
>gi|260688341|ref|YP_003219475.1| putative phage-related replicative helicase [Clostridium difficile R20291]
MLNEDMFYHEEHKYIFNAIKEINKRNEVIDIITLTEELKRKGHLNNIGGISYITSLSTIVPTVSNFTSYV
SIVIEKYKNRNIIDKFNKFNLGEIDDNTLIYQLENDINKANQKLIKKDSSITAISERAFEYINDEMNEGI
KTGIKFLDDTIGGLYGGELTTIAAKSGRGKTALALQILRNVIFQGKKVLFISGEMSDIQILFRNIASLTG
ISVVKMKNRNLNDDEIVKYIQALSIINQENNLYINDSVNTVSGIKREIKSTKPSLVIIDYLQILDYEGKE
VGEAKFADLSRQIKKITLDFNIPVIQLAQLNDELKDERPKGDRVMRSSKQIYMDSNSVIYIHRPTEKEAL
NYCKTMGIEDIRELRRREKGFGANLSEIIVAKNRDGESGFRPYWYIGNLFSFEECKKIQEI
>gi|260688342|ref|YP_003219476.1| hypothetical protein CDR20291_3001 [Clostridium difficile R20291]
MQLSNKGWIKLYRELLDKSIWKDIKPERKVILITLLLMASHKENHVFIDNKRIKIKSGQFISSYSKIAER
CGKGVSYQMVRSCLLVFKNAGFLTYETTNKYIVITIENWELYQENIENQQPNQQTINNQSTTIKNIKNEN
NIIYSEIISKFNSTCIELSKVKKLTDTRKRRINSIIREYDKEAVLEVINIVSKTSFLNGNNNTGWKANFD
WIMNSSNFTKILEGNYHSKEIVINKETGIYNPDDSQLKW
>gi|260688343|ref|YP_003219477.1| hypothetical protein CDR20291_3002 [Clostridium difficile R20291]
MKENNNLEVLKTLQATLNIIVKNEEEAQEKKQGYKIIENAKRNKAELITCKEASKLYPIGESKFRQLCHS
KNKGFPCIWINNRVYIIKNKLDDWFIENANGIKL
>gi|260688344|ref|YP_003219478.1| putative phage transcriptional regulator [Clostridium difficile R20291]
MGINLKIFRIKKGLKQQELADRVGISRYYLSNLETGKANNPSNDLMIKLSRALDTTVEELFFSKEE
>gi|260688345|ref|YP_003219479.1| putative phage DNA-binding protein [Clostridium difficile R20291]
MLSIRIYYFSVLICVLLGYTLYEVIILQIGKNLKKIRKQKELTQIQLAEISGISRNALINYENDKRIPSI
DTLSKLAKALKIEKTIFYFDIENEVMTNEDVLYFLQSLFPEEYYSFDEFLNAISNLMEDDDIRITSSLLL
GAWSDKDQYYKLGEKLELNENQVYNWILSDCVSNTELDFSLHPDDIKEIIKNDVLIKQSIDELLDIGLSE
ENIEAIYDYFSEATDNGSNIRLKKLISQKENMTIKNNDYFKLLQENNELKEKNKKLENTLKEIKKLLTKI
>gi|260688346|ref|YP_003219480.1| putative phage repressor [Clostridium difficile R20291]
MINNTIGEKIKQYRKSINMSRNELANKIGCSVHAIAKYEQNQRIPSLDMIRKISTALSIAINKLIVEEND
LDTLTNNNINLKVFDKELDLVVHILENYGYDIKTDYKKKFEITDNADTIKPISLSFSDFKDFSKNLNWVI
NGLVENFIQENSNGLIEDEDEEY
>gi|260688347|ref|YP_003219481.1| hypothetical protein CDR20291_3006 [Clostridium difficile R20291]
MKGAKIMNKSYIPKYTHKFPTNLPHGDKKYTLTYIRRMISEFVYDMGNLENNPFTFPEVQTLLDGITVGG
HKLSDQNQILNIKSSWDYIIKLSNKENLSLNKDTICSIHKIVAKDEALIVGDFRNGNIGIAGTTQYECIE
ATLLNNLFISDISIINKITNPLEKAIIINLWLSYCQFFYDGNKRTARLTSNLILISNDIGVLSIPAKHKQ
EYNTLMLNFYETLEADEVIKFLLEKCITFFDGYNYKSYKELFKNGN
>gi|260688348|ref|YP_003219482.1| phage integrase [Clostridium difficile R20291]
MATKRANGEGSIGKYKDGWRSRIMIGYNEDGKPIRKEFYGKTQKEVKDKLDAYKKQYYLSSDISDDKITL
EHWFYNWLFEYRIKDLKPKSFERYESIYRNYIKDTDLGNVKLKDLRVSHMQKYYNRLLDSNKSIPTIRQI
NTKLKTCLSEAEKQGLIQRNYCTMVNIPVEKKENRLEILTLEQQKNFIKAIEGHKLEVLFLVALGTGLRL
GELLGLKWFDIDFKNSNLTVKRTLQRTYFIDKNGNRELKVLEQEPKTSNSYRTVPIPKDVLNKLKEHKVN
QNVDILKAGELYRNDNYVFCNELGVPIDDKRPLRNLKSILSSLDIEPIKFHGLRKTYATRLFENDVPPKT
VQVLMGHYDISITLNIYTQVMEDKKVEAVEKLDKIFSL
>gi|260688349|ref|YP_003219483.1| hypothetical protein CDR20291_3008 [Clostridium difficile R20291]
MAKTPNIIFLRDSLDFGKGFYVTSIKTQAINWIERFKKRGKKAYLNSYSLDIDKLKENCKVKIFNSYNLE
WLDFILECRNMSDVYMKYDVIIGGIADDKIYNTIELYQDNLIEKDEALKRLKYYKPNEQICITNQNVIDK
YLKFRCEEEV
>gi|260688350|ref|YP_003219484.1| hypothetical protein CDR20291_3009 [Clostridium difficile R20291]
MRFVMDERKLEFSIFCIEALAEKLNIDSEGVYKLLKHDTDILDNYIIPCYEALHSQSKSYIVEDLIQVLE
EKGVM
>gi|260688351|ref|YP_003219485.1| hypothetical protein CDR20291_3010 [Clostridium difficile R20291]
MESKEKSILRATHFGIIKIGEKDLNCAVLENGSRIINKSTVFKAFGRTKRGRKKDEIRVPSKPNLPSFID
AKNLSDYISDELEDMLINTIKYKTKNGRIVEGYPAEIIPLICDVYLQARLDNKLAVQQEGLAIASEILVR
SLSKIGIVALVDEATGYQYDRDRDELQKILSMYISKEFLPWTKRFPDEFYRQMFRLKNWTYPRPSSKRPG
IVGTYTNKYVYDLLPPGVKEELQRVNPTVKPGQRKHKHHQFLTEDIGNDHLKNHLLKVITLMQASKDWKD
FNVLFNRAFNLPVQLEIEYDE
>gi|260688352|ref|YP_003219486.1| SsrA-binding protein [Clostridium difficile R20291]
MAGKKILATNKRARHEYFIEETYECGIELKGTEVKSIRQGKVNLSDGFASVDNSEVFLKQVHISPYEQGN
IFNVDSLRVRKLLLHKHEIRKLIGATTIKGYSLIPLSLYLKNGKVKVEIALAKGKKLYDKRQDMAKKDAQ
RRIEREMTGKY
>gi|260688353|ref|YP_003219487.1| hypothetical protein CDR20291_3012 [Clostridium difficile R20291]
MDLSKKVKILENASDGKSEFEILEFEKLEGASSPLMAMGLYFAREAGLKARQIKIKLNNSSIKTEAGALY
YYKGNISSETKIGGVGGLFKKGISGALTNESMMKPVYKGTGEVYLEPSFRHYLFMSLDNDSIIVDKGLFY
CCSDTIEVKAFTQKNFSSALLGGEGFFQIELSGTGVIVLECVVPQSEIVEYELKNGEELKVDGNFAIART
SGVNFSVTKSDKSLIGSALNGEGFLNTFTGNGTVWLAPTQVMYEKLSFGAMPTNDNMNNKVSKQK
>gi|260688354|ref|YP_003219488.1| putative acetyltransferase [Clostridium difficile R20291]
MLVKFLKILWIDINSFTYFVKFKIPLITLNILIGGHMNLNKVKFTEEHAIEVTNWKYEGKYSIYNLPPWE
EIKKKNFSLSKEDKRKNFISFINDNKELIGFINLLDEGSYVFFGIGIKPDYCGMGIGKEIISLGLQECRN
KYSTKPIVLNVRTWNMRAVKCYKSQGFKIVETQVQKTHLGDGEFFVMRYQ
>gi|260688355|ref|YP_003219489.1| putative ABC transporter, permease protein [Clostridium difficile R20291]
MIPLIQGVANLDRISTAICLENYVAIIGIVMLVPVFSLEQSKEIDEIVSSKSLSQVIVQLIRILMSIIGI
VVLIIGFVNVLIYLGCNFPVVEYIIGSFASAMFIGSLGMFFSNLFNNTIIGYMISIGYLILNMMTKGKYV
GKFFIMSMSQGSFDEKYWLILGSVVLIIASLLIKPIKRKIR
>gi|260688356|ref|YP_003219490.1| putative ABC transporter, permease permease [Clostridium difficile R20291]
MNLFIKECKNILKSMVYYIFIVVLVFFYISQLGSSVSNDVSKNIPNDGNPLVAPQKVENIDEYYSVHNQY
PYGQKESMKTEKVIPNATINLIREYQKNTYTTYPTGVVKYIKLDQNKTKTIEKYIEEITGKSISEINLIW
KTDESIKIDYSKVSLERFEEIMQRVDDILGGGSAYAFDKLQRFGVVPVTYDEAMKNYNYTIQKDKVSNGY
ARIFCDYIGIVLSIFPVFVAVFMSLKDKRSRMREIIYSKQVSSCKIVLSRYFALVFIMILPVLILGMKDL
LPLIFFAKDKGISIDNLAFIKYTLWWILPTLMIVTAVGMSITILTDTPVAIIVQLIWWLYSINSTGLKGD
YSTMGLMIRHNSVLNGDIIIQNFNQIMINRIVISLGALVLVLLAIFLYEQKRRGNLDVWAKFSKLFSSNK
RKLQIKHFN
>gi|260688357|ref|YP_003219491.1| ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MEMKIAVSNLSKRFGKKQALDNINLEIDSGMFGLLGRNGAGKTTFMRILATLLSKTEGSIHMCGVPIENT
KEIRNMVGYLPQDFSMYPNMTVYKAMDYLAVLSDIPLRKRRKIIAKLLSKVNLTNYQNVKVKSLSGGMNR
RLGIAQALIHNPRVLIVDEPTAGLDPEERIRFRNLLCEIANDRIVILSTHIVGDIEATCENVAILDSGKV
IYNGSTEALAKLAEGKVYSIEVDKKDIENIKSRFIVIGMLTHGGKAILRIISDDKPFETAVNCNPTIEDG
YMLIMGGDNI
>gi|260688358|ref|YP_003219492.1| hypothetical protein CDR20291_3017 [Clostridium difficile R20291]
MGMIGCYTKISEENVFKLQQAEENLQDFVFEDANENSTINIDKAWHAIHFTLTGCPFGGDDENIFSKLVL
SGNILMEIDGEFPVMLITANDVKKLSKAMNSLEEQAFRKRFNINEMLENNIYPVMNDESEDDFFEYVWAN
LIELKKFIQEASDDGLAVIFFIM
>gi|260688359|ref|YP_003219493.1| ribonuclease R [Clostridium difficile R20291]
MIPGLKESLLGLINESAYNPLKKEELAEIFDIHSSEMPMFYNFLNELEEDGYICFTKKGKIVSPNQMGYF
VGKFVSHKKGFGFVESDVEYTQDLFISSDNINGAMHNDRVMAEIVVPATEEKRAEGRIVKVIKREITRIV
GTFQSSKTFGFVTPDNKKFTKDIYIPKKHFSGAVDNDKVVCEITVWPQEDRKPEGKIIEILGQKGERGVE
IDSIIREHGLPEEFPKKVLQEAEAVAVEIPQEEIKRRRDLRDLNIFTIDGDDAKDLDDAISIEVLPNGNF
KLGVHIADVTHYVREKNKLDKEALKRATSVYLVDKVIPMLPKTLSNGVCSLNPFEDKLTLSIFMEIDHKG
NVVKHEICESVINSKARMTYTEVSDILEKDDEKLKKTFEHVVEDFKNAEILAKILMSRREKRGAIDFNFP
EAKIILNGKGEVVDIKPYERRISNKIIEEFMLISNETIAEHFYWMGIPFVYRIHETPSLEKMEELSKFIS
TFGYIIKGDKEEVHPKALQGIIEKIKGKKEEGAISTIMLRSLKQAKYSPECSGHFGLAAKFYCHFTSPIR
RYPDLQIHRIIKESLNNKISGKRQEQLTTIVDYASVQSSEKERKAELAERDVHDFYKALYMKDKVGQEFE
GVVSSVTSFGIFVELDNTIEGLIRLANMNDDYYIYDESSYSVLGERTKKSYKIGDLVKIKVESVNVDFKE
IDFEIVEKIEE
>gi|260688360|ref|YP_003219494.1| hypothetical protein CDR20291_3019 [Clostridium difficile R20291]
MEEIKLEEVIAKIITIENGFKEIENIAKKIVKNNDSKKCYYLSIYLYRSEYYQVRELAVFILGFISVTIS
EALLFLKDNVSKDENWRVQEILAKSFDYYCSEVGYEKALPVIKEWLNSDSPNIKRAVTEGLRIWTSRDYF
KSNPDVAISLLSSLKEDDSEYLRKSVGNALRDISKKYPDLVKKELDSWDISNKKVEFVYKLASKCILAK
>gi|260688361|ref|YP_003219495.1| putative transcriptional regulator [Clostridium difficile R20291]
MKLRDEYTCPLELTHDMIKGKWKSIILWRLRIGPTSLSKLEKEINGINQKMLLEQLKELIEFGLVDKKTY
KGYPLKVEYSLTPIRGKQILDALAIMQDIGISFMLDNGMEDILKEKGVLK
>gi|260688362|ref|YP_003219496.1| putative phosphatidylethanolamine-binding regulatory protein [Clostridium difficile R20291]
MKVTSTGIVNGVIEDKYGKRGTQFNEGGMPTYSLPLKFEDAPKNTVSFAVFLEDKDSVPVCGFAWIHWLA
VNITKDELNENESVTATDFVQGTTSWHGKLGGLDRLEASVYGGMAPPDRPHVYEIHVFALDTILDLEKGF
YMNEFFKAIEGHVLDTFTLKGSYSN
>gi|260688363|ref|YP_003219497.1| hypothetical protein CDR20291_3022 [Clostridium difficile R20291]
MIKKIEHVVITNNNIENYINFYKKFGFSSKEMSEKYKLKARNVKINLNIKGYKFLPYVKNLKASRDNLCF
KINTNIDEPKKYLEQNEIQIKRGIVECTGVFGNMKSIYLKKTNGNLIELSNHRITESKPWKI
>gi|260688364|ref|YP_003219498.1| putative transporter [Clostridium difficile R20291]
MSLGYVLKKLGLFDTHTLNKMNNVCFKSFLPLLLFFNIYNTDLDGSLNFKLMAVAVIIIFSIFLILVFII
PKIEKDNKTRGALIQGVFRSNFVIFGIPVTISLFGDKSIGVTSLLIAVIVPMFNVLSVVILEIFRGGKVN
IRHMIKSVLTNPLIIASFIGLTMLILNINIPTFLHKTIGDISKIATPLSLIILGGSFSFSAIKGHIKTII
LGVCGKLILVPSIFLPISIFLGFRNVELTSLMIMLSAPTAVSSFTMAQQMDSDSELAGQIVVFTSGFSII
TVFLIIFILKQNNLI
>gi|260688365|ref|YP_003219499.1| putative subunit of preprotein translocase [Clostridium difficile R20291]
MSNILMGVQVVLGILLVISIMPQDSKNALPSEFGGEGSQAYFKPKGKQAFLARVTKITAVLFFINALALL
IVKK
>gi|260688366|ref|YP_003219500.1| gcn5-related n-acetyltransferase; gcn5-related n-acetyltransferase [Clostridium difficile R20291]
MNLEIIRATSENAIEMGFIHSCSWRKAYKGIIPDKIIDEFTSEKRAEVFQSVIPKAEEEYYLFKVNGIPA
GFASLNRSQEDNAPKCVGEIYSIYFHPDFWGTSVTKKGLQFCIDRLSNLGYSYITIWVLKDNTRAINFYK
KNGFTCDDFEKEIHIGKKLLEVRYSKKI
>gi|260688367|ref|YP_003219501.1| enolase [Clostridium difficile R20291]
MSVIELVYAREVLDSRGNPTVEVEVVLEDGAMGRAIVPSGASTGAFEAVELRDGDKGRYLGKGVETAVAN
VNEIIAPEIEGMDAFDQPAIDAIMIELDGTPNKGKLGANAILGVSMAVARAAADEIGLPLFQYLGGVNAK
QLPVPMMNILNGGEHADNNVDVQEFMILPVGACCFKEGLRMGAEVFHSLKKVLGEKGLACGVGDEGGFAP
NLGSNREALELIVEAITKAGYKPGEDVMLGLDVAATEMYNKETKKYVLAGEGKELTAAEMVALYEDWSNN
FPIITIEDGLDEEDWDGWKLLTERLGNKLQLVGDDLFVTNTERLEKGIENGVANSILVKVNQIGTITETL
DAIEMAKRAGYTAVISHRSGETEDSTIADLAVAVNAGQIKTGAPSRTDRVAKYNQLLRIEEMVGEQARYC
GLKSFYNLKK
>gi|260688368|ref|YP_003219502.1| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [Clostridium difficile R20291]
MMKKPVALIIMDGFGYNKDVKGNAIAESKTPNLDRIKKEYPNTLINASGLDVGLPDGQMGNSEVGHTNIG
AGRIVYQDLTRITKSIKDGDFFANKVLCEAMDNAKENSLHVMGLLSDGGVHSHIDHLKAIIKMAKDKGVQ
KVYVHAFTDGRDTDPQSALEYAKEVQASMDEIGVGEFATVSGRYYAMDRDKRWERVELAYNAMVRGIGEK
ANSIEEAIQNSYDDGKNDEFIMPTVIMKDDKPVGSIKENDSIIFFNFRPDRARQITRALVCEEFDGFKRE
DIKNFFVCLTEYDITIENVHIAFGPQSLANTLGEYLAKNGKTQLRAAETEKYAHVTFFFNGGVEEPNKGE
ERLLIPSPKVATYDLKPEMSAYELTDKALDKLGEDKFDFIVLNFANPDMVGHTGSIEAAIKAVETVDTCV
GKLIDKIVELGGSAIITADHGNAEYMLDPETGKTVTAHSINPVPFIVVGQEYESAKLLDGGRLSDIAPTV
LDMMKLEKPEEMTGHSLISK
>gi|260688369|ref|YP_003219503.1| triosephosphate isomerase [Clostridium difficile R20291]
MRKPIIAGNWKMHKTIKEALEFVNEVKDKVNSDKVEAVICAPFTLLKDLKEATKGTNIKIGAQNMHFEEK
GAFTGEVSPLMLKEIDMDYVVIGHSERRQYFNETDETVNKKVLKALEVGIDPILCVGETLEQREAGKTKD
VCKVQVEKALENVLKDDLSKVVVAYEPIWAIGTGKTATAEDANDVISYIREVIKGLYGELANEVRIQYGG
SVKPSNVAEIMGQSDIDGALVGGASLASNDYLDLVNF
>gi|260688370|ref|YP_003219504.1| phosphoglycerate kinase [Clostridium difficile R20291]
MSMLNKKTIEDIDVCGKKVLVRCDFNVPLQDGVITDENRLNGALPTIQYLISKGAKVILCSHLGKPKGEA
KPELSLAPVAKRLSEMLGKEVVFAADDNVVGENAKKATEKMENGDVVLLENTRYRKEETKNEENFSKELA
SLAEIFVNDAFGTAHRAHCSTVGAGEFLQERVCGYLIQKELKFLGEAVANPVRPFTAILGGAKVSDKLAV
INELLEKVDNLIIGGGMAYTFLKAQGYEVGTSLLEIDKVEYAKEMMEKANNKGVNLLLPVDVVMADHFAP
DATPIVTEDANVKEDYMGLDMGPKTIANFVKTIKESKTVVWNGPMGVFEFENFANGTLSVARAMAELTDA
TTVIGGGDSAAAVNQLGFGDKMTHVSTGGGASLEFLEGKELPGIAALDNK
>gi|260688371|ref|YP_003219505.1| glyceraldehyde-3-phosphate dehydrogenase 2 [Clostridium difficile R20291]
MVKVAINGFGRIGRLALRKMMEQQDKFEVVAINDLTDAKMLAHLFKYDTAQGRFNGEIEVKEGAFVVNGK
EIKVTAERNPADLPWAELGVDIVLECTGFFTSKDKAEAHIQAGAKKVVISAPATGDLKTIVFNTNSDILD
GSETVISGASCTTNCLAPMAKVLNDKYGIEKGLMTTIHAYTNDQNTLDGPHPKGDLRRARAAAGNIVPNT
TGAAKAIGLVIPSLKGKLDGAAQRVPVVTGSITELVCTLGKNVTVEEINAAMKEASNESFGYTEEMLVSS
DIIGISYGSLFDATQTKVMEVDGKQLVKVVSWYDNEMSYTSQLIRTLGYFAQLAK
>gi|260688372|ref|YP_003219506.1| central glycolytic genes regulator [Clostridium difficile R20291]
MKNLLEIQKKLIPQAIELMERRYSILRQISLSEPIGRRTLSNVLEISERIIRSETEFLKEQGLIDVAVSG
MTITKEGSDLLDKLKDIMSDIMGLSKLQDRVREKLGIKRVILVPGSCDENGSLLKDVTRYGCEYFLGILK
DGDIVSITGGSTMLEFSNVIKTDKRYPNSTIVPARGSMGTDVEMQSNNIVASISKKLHSNCKLLHIPDEL
DESAMKTLSQVPEIKTTLEYIKRTDILVFSIGRADVMAKRRKLPEDKVDEILSKNAVGEAFGYYFNKDGE
IVYKLNTVGIDLETVKQVKETIAIFAGTEKVEALLAISNMHKNMVLVTDEESAYKILSLL
>gi|260688373|ref|YP_003219507.1| RNA polymerase sigma-54 factor [Clostridium difficile R20291]
MNFNNSLELTQSQKLIMTTQLKQSLSILNMSKLELEEEIKREAENNPLVEVEKSGEINWEEYIKDMDRSR
RLDRTEISYNPDNEVNLENLVKYSSNLYEDLKFQISLYKLTDKELEVCEYIIDSLDEDGYLRTEEKVIVD
TLKIDEELFEKCLISVQQLEPSGVGARSLSECLMIQMASLGIYNEILEEIVTKDLNLIANNKYKEISKKY
NMSLQKCVELINIIKTLDPKPGRTCSVEKSVYIQPDVTVEKIDDEFIVYLNEKDSYQIRINSYYKDILKN
SQSDESAKEFIKERLNSATGLMKNIESRKTTVLKIAEEIVKAQDEFLRKGTKYIKPLKMKDIAEKLEFHE
STISRGVNGKYMLTPFGVYEFRYFFSSAIETENNEMASSTSIKKIIKETIKDENKKKPLSDDHISKLLKE
KGINVARRTVAKYREELGIPSSSKRKEY
>gi|260688374|ref|YP_003219508.1| xanthine dehydrogenase, molybdenum binding and iron-sulfur binding subunits [Clostridium difficile R20291]
MVEFILNGEKVVAKEGKKLLDFLREDMNITSVKNGCSEGACGTCMVIIDGKATKACVFKTDKLAGKNITT
IEGLSERERDVFAYSFASQGAVQCGFCIPGMVISSKALIDVNNNPTEDDIKKALKGNICRCTGYVKIIKA
VDLAAKIFRENIDVPKVNCKGLVGENLPRVDAVGKALGYSEYVDDMRIEGMIYGSAVRAKYPRALVKKID
IEEAKAYPGVVAVLTAKDIPGTIKVGHLKKDWDTLIPEGEITRYLGDGIVLVAAETREALEEAKKLVKID
YEELTPLSTTADALREDAPKIHETGNILVKEHLVRGNAKEKIENSKYVVTKRYTTPATEHAFLEPECAVA
GPYEDDGVIIYSTDQGVFATQHECADMLGLPYEKVRVINKMVGGGFGGKEDMSVQHHAALLAYHTKRFVK
VQLTRKESIIVHPKRHATEMEFTTACDENGYLTGMKATIISDTGAYASLGGPVLQRLCTHAAGPYNYQDI
DITGTAVYTNNPPGGAFRGFGVTQSCFATECNLNLLAEMVGISPWEIRYKNAIRPGQVLPNGQFADEGTA
MAETLEAVKEEYEKHPRAGIACAMKNSGVGVGIPDVGRCRLVIKDGKVHIRTSASCIGQGLGTVMTQVVC
ETASLLPENIVHEVPDTHLTPDSGNTTASRQTVFTGEATKVASNKLKEALDSGKTLLDLEGEEFYGEYES
ITDKMGCDKENPVSHVAYGYATQVVILDENGKLEKVVAAHDVGRAINPISLEGQIEGGVVMGLGYALTED
YPVVNSVPTAKFGTLGLFKSTDIPEIQALIVEKNKDLLAYGAKGVGEICTVPTAPAVQNAYYVFDKEFRT
ELPLQNTPYSKKK
>gi|260688375|ref|YP_003219509.1| D-hydantoinase [Clostridium difficile R20291]
MGIVLKGGKVVTSEKTYCADVRIEDEKIVDIGLDISKENDEIVDVSDSYVIPGGIDTHTHFDLDTGVTKT
ADNFETGTKAAIVGGTTTILDFATQAKGCSLKDGLEEWHEKAKDKSYSDYGFHMAITDWNDSVCNEMEDM
VKEGVSSFKLYMAYKGSLQVDDGVIFEALRKAEEIGGIIGFHCENGDIICELVDKAKSENNLSPKYHQLT
RPAIMEAEATSRLMKIAEVANSKVYVVHLSCKESLEEVLKAKQRGVDVIVETCPQYLLLNDELYDLDGFE
SAKYVMSPPLRNKENNEILWNAILDNQIDTIGTDHCSFNYKGQKELGINDFSKIPNGSPGVEHRMSLLYT
YGVCKNKISINKMVEVTSTNAAKLFGMYPNKGTIEIGSDADILVLNPNKKSKIEAKKQLQNVDYTPYEGY
EVDCQIEHVYLRGKEVVRDGELICNTPSGRYINRRLTKGAREW
>gi|260688376|ref|YP_003219510.1| putative dihydroorotate dehydrogenase, catalytic subunit [Clostridium difficile R20291]
MANLKVNLYGMEFLNPIMTAAGPGAKDGALCQEAAKGGAGAICTKTISVLPADVPRPCMAKTNSGFLNTE
LWSELPKEQWIEEEYKKVKETGLPVIVSMGYSAEQIAEVAPLVKPYADAVELSTHYVGTDVAPIVNALKA
AKAVLDVPVFMKMSPHTDIQTIAKAVEEAGADGLVMINSFGPCMAIDVNTGYPIMGSKAGYGWLSGAPIR
PLAIRCIYEASQVVNIPIIGVGGITCGKDVAEMMMAGASAVQVCTEAILKGPSIYGKIAKELNEFLDENG
YADVNEIKGLTHKKMAARGFRTHSVAPVVDDNKCIKCKQCVTSCVYEALEVTDKLNIDADKCFGCGLCVT
RCPKGALSICYNQVEAMNE
>gi|260688377|ref|YP_003219511.1| xanthine permease [Clostridium difficile R20291]
MSQDKSPKIAPVDERLPVSKSWVFSLQHVLAMCAGAVAVPMMIGSAARLDHASIVFLINACLFMAGIGTL
IQSVGIGNIVGAKIPVIEGTSFAAVAGMTAIASSYSDSQVAIQTVFGSVIVAGLFCILLAPVFEKLIRFF
PSVVTGTVVMVIGISLFPVGIKWITDNKLEAVEPNSLALALAVLAITLLSFKFLKGIWNSTAILVGIVLG
TLLSMAVGMADFSAVNGVGWLNLNVPLKFGMPRFEPSAILSLCLIMLVLMTESVGNMIAIHEMVDKEVTG
KNIKRGLFGDGISTALSGIFNSFPITPFGQNTGIVGLTGIKSRFIAVYAGVILLVLGFLPKFAAIIGAIP
KPVLGGVGFAMFGMVMVGGVKTLSKVKFDGTKNGVIVAVSVGLSMIPLTNPDFYHNFPTWVQTIFHSGIT
TGSLSAVLLNIFFNELGSKKEKNNKVEEAK
>gi|260688378|ref|YP_003219512.1| putative amidohydrolase [Clostridium difficile R20291]
MILVGNGRLISQDSLNPYMEDGCVVINDNLIEDIGTTEEMKAKYPVHEFIDAGKKIIMPGLINSHMHIYS
SFARGMAVPGKPSENFLEILNNLWWRLDKQLTLEDTKYSAYATYIECIKNGVTTVYDHHASPNAIEGSLF
TISDVAKDLGIRTCLCYEVSDRDGGNTIQQGINENVNFIKYAQKDDTDMIKGMFGLHAAFTLSDDTLNKC
ASEMAGLDTGYHVHVAEGLADLQYNVDKYGKRVLERFNDFGVLKEKTIAVHCIYISAEEISLLNKTNTFV
VHNPESNMGNAVGCSPAIELLKRGVTVGLGTDGYTSDMFESLKVANIIHKHHLKDPRVGFEESQTMLFDN
NRKIAKAYYKNDLGVLKKGAYADVIVVDYIPHTPLTENTIGGHTIFGMSGRSVDTTIINGKVLMKDRKLI
NIDEESILAKSRELSQNLWNRI
>gi|260688379|ref|YP_003219513.1| D-aminoacylase [Clostridium difficile R20291]
MRTLIKHGLIVDGNKTPAYEGDILIENEKILKISQDLNEEADKVIDAKGRVICPGFIDTHSHSDLVILVN
PYNEVKIRQGITTEVLGQDGISMAPLPQEHISSWRKNLAGLDGESDEIDWKYETTENYLKMMDYNGVGLN
ETYLVPHGNVRMEAMGLEDRPATKEEIQKMCEITERELKAGAIGLSTGLIYIPCAYSLTEEIIEMCKVVA
KYDGVFVVHQRSEADTILTSMEEIIEIGKQSGVKVHFSHFKVCGKANWKYIPQVIELLEKAEKEGIRVSF
DQYPYAAGSTMLGVVLPPWAHSGGTDKLIERLSDENERAKMKKDIANGIEGWDNFIEFAGIDQIFVTSVK
TEKNKDTIGKSLLEIGKMRGKDPLDATFDLLKEEENAVGMVDFYGLEEHIIGFMKRDEQNVCTDGLLAGK
PHPRAYGSFPKILGRYVRELNVLTIEEAVYKMTKKAATSFSIKDRGELKEGYFADIVIFDKDTVSGCDDF
INSMQYPTGIDYVIINGNCVVEEGKYNKIKAGKVLKN
>gi|260688380|ref|YP_003219514.1| putative amidohydrolase [Clostridium difficile R20291]
MLNETRKKQLTEVCQDLIRNASYSGQEENVVKAIEENFALLGFDSWSRDRYGNIVGCIKGNKPGKKILFD
GHIDTVPVPDASKWSVPPFEARIVDGKIYGRGTSDMKGQVSAMMAAVSYFAEDTNKDFEGELYVAGVVHE
EIFEGVSAREISKAVQPDYVVIGESSELNLKIGQRGRGEIVVETFGKPAHSANPEKGINAVYKMANVIQK
IQQLVPPTHPVLGDGILVLTDIKSSPYPGASVVPDYCKATFDRRLLVGETREGVLAPIQALLDEMMKEDP
ELNAKVSYAVEKADCYTGNTIESERFFPGWLYDEEDEFVQAAYNGLKEAGIDSEITQYSFCTNGSHYAGE
AGIRTIGFGPSKENLAHTIDEYIELDQLFKGAEGYYGILKSVYKK
>gi|260688381|ref|YP_003219515.1| diaminopropionate ammonia-lyase [Clostridium difficile R20291]
MREIKWKLNNLPKSEEKEKGIEFLRDEEIAKAKAFHESFPQYEKTPLVKLDNLAKSLGVSGIYVKDESYR
FGLNAFKVLGGSYSMGRYLAQRLDTDISELGYDKLTSKEIKEKLGEITFFTATDGNHGRGVAWTANKLGQ
KSVVLMPKGSSEFRLNKIKGEGADASITDLNYDDAVRLANDYAEADDHGVMVQDTAWDGYEEIPAWIMQG
YGTMAKEAIEQLKEYGVDRPTHVFVQAGVGSLAGAVQGYVASIYDECPITVVVEADEADCYYKSAEAGDG
KPRFVGGDMPTIMAGLACGEPNTIGFEVLKNYSSAFVSAPDWVSAKGMRILGNPLRGDEKVISGESGAVT
TGALVSILESEDLKDLREALKLDENSKVLLISTEGDTDPDKYRDIVWNGECQSK
>gi|260688382|ref|YP_003219516.1| hypothetical protein CDR20291_3041 [Clostridium difficile R20291]
MQYAIELYYDKKTEKQLFDLSKKIADEKISTKYLEWKTRPHLTLACFNDVDEACCIDKLKGFAQNHKVIP
AYIGSVGMFNDTKTVFVSPIMNSSMYQFQRELYEVLQDFDSNGWEWYHPNRWVPHCTIALTGDDESEAFF
RASDVLLREFKKISGEFVSIGLVKITFPVEEIFTVNMNR
>gi|260688383|ref|YP_003219517.1| putative sigma54-dependent transcriptional regulator [Clostridium difficile R20291]
MGETMLSKLKEFQQEMIKYTETVASVLDVDIEIVDDRLIRISGTGLYKSKINESVVTEGFIYDNVIQTGQ
ELVVLDICDNQLCIECSHYMKCLNKVIIAVPIKYNNRTIGVIGAISTDKTKKVEISAKIDNYLKFVNHIC
DLISMKIEEHEASKNSSRKMDMMIEIIENVEKGVIILDINSKISYINNIALKKLDIYKNIIENIVNIVSV
ESSSNGHELLEIDIDNKIYNINAKIIPVYPYINQYDKIIIFDKTYINHKGHGKVNSGWGNSDIESIIGNS
EAMLKVKERTKKLAKSNSTVLITGESGTGKELIARAIHAEGSRWNKPFIAINCAAIPENLLESELFGYIK
GAFSGASSGGKVGKFELANEGVIFLDEIGDLSMPLQAKLLRVLQERKFARIGSNKLIDLDIRVIAATNKN
LLKLVNEGKFRDDLYYRLNVIPINLPPLRERKDDIEAIMMKFASKYSLELGIQLNKIEENVMNMLINYNW
PGNIRELENAVEYMMNLVGDDGIIYKDMLPLDILNYYNINGNVCKNKDINIIFEDDIVGGIVENQERILS
IKELELTYINKLLNKYGRDTKTKKKIAKDLGIGLATLYRKLEEEQ
>gi|260688384|ref|YP_003219518.1| putative regulatory endoribonuclease [Clostridium difficile R20291]
MSKVVIATEKAPGAIGPYSQAIQVGNIVSTSGQLPIDMKTGELVSDPKEATKASLDNVKAILEQAGTSMD
KIFKTTVFVKDLKDFNDINEVYATYFKENPPARSCVQVAQLPKDAVLEIEAMAVL
>gi|260688385|ref|YP_003219519.1| hypothetical protein CDR20291_3044 [Clostridium difficile R20291]
MSKSELTAETTEEMLEVLSGKDYDIACHLHELGKSLDCKIEPKTGARSYKIVYSTKKPKRSLFTIECNEK
KWRVKANLFHLNTYKDAVEECSKTIKDSITKTRTCKKCNSKCIGGSSFDLDGKSYLTCIGSGHYFANMEE
MDWKNLEKLITKENNIMQESV
>gi|260688386|ref|YP_003219520.1| putative iron-sulfur flavoprotein [Clostridium difficile R20291]
MSKNVLIVSASPRKGGNSDLLCDQFIQGVLESKNQVEKIFLKDKDINYCTGCGACYEKEASCSQTDDMGE
ILEKMIGADVIVLATPVYFYTMNAQMKTMIDRTCSRYTEICDKDFYFIVAAADENVADMERTIEGFRGFT
SCLNGSKEKGIVYGVGAWNVGDIKGSKAMKQAYEMGKLA
>gi|260688387|ref|YP_003219521.1| MerR-family transcriptional regulator [Clostridium difficile R20291]
MTISEVSKKYELSADTLRYYERIGLIPPVNRNKSGIRSFTEEDCEWVNFIKCMRGAGLSIETLIEYVAMF
QQGSSTIKARKELLIEQRNQLAKRIEEMQKTLERLNFKIDRYEEGIIEKEKVLKSSRNKKMEAVSYE
>gi|260688388|ref|YP_003219522.1| putative oxidoreductase [Clostridium difficile R20291]
MEAKKLGFGLMRLPIKDENDVTTIDMEHLNKMVDTFLERGFTYFDTAYVYHMGKSEIALRESLVKRHKRE
SFTIATKLPLMALKKKEEQETIFNEQLEKCGVDYFDYYLLHNIGVSHYEVAKKFDSFKFIEEKKKEGKIK
NIGFSFHDSAELLDKVLSEHPEVDFVQLQINYLDWDNESIQSRKCYEVAEKHNKPVIVMEPVKGGTLAKI
PEKAEKLLNDYNPDMSISSWAIRFAASKDNVMMVLSGMSNMEQLLDNTGYMQNFKPFVQEEYNIIDEAVE
IINESILVPCTACQYCVEGCPKNIAIPNYFALYNAEKQALNTGFSTQMVYYNNYTKTYGKASDCIECKQC
EESCPQHIKIIDALKNVAETFEK
>gi|260688389|ref|YP_003219523.1| cell surface protein [Clostridium difficile R20291]
MNNKNLAILISGMMFFSSSSAIFADNTTKQERLIGKTRYETAVEVSKLGWVQSKTAIIVNGNSIQSALCA
NPFAKLKNAPILLVNNNSIENSTKAELKRLGVDNVYIVDSGNSISSKVENEIKSLNIKINKIVGNNIYKM
STNVLKEIDKIKKVENVAVVNGLKGLSDAVSIASPAAIHNMPIILVSDENSNDSSINFLNNRSIKKSYIV
GGNKILSDNTVKKYPNRERISGSDRNNTNAKIIDKFYKDKKINNVFVAKDGINQENALVDSLSIGVLAAK
ENSPIMISNGSLVNSQKEFIKNKDIDEITQVGGGYNQKAFEDILKLKNVNIRNKTKKISLIQAKEILKQA
LPGSDILVCYYDEDDNEYDCKVIKDNILYEIEIDAYSGKIIEIEKDDDLNDNNLGTQNISLDKAKSIALD
AVPNGNLIYCKYDAEDNEYEAKVIKNKKTYELEISAFDGRIVDIDMDNDSDDDFDDNDKNNSNTNDNSSI
ISAEKAKSIMLDKVPGGKIVKFKYDEDDKEYEGEIIKGKIEYEITINAITGKILEFEIDD
>gi|260688390|ref|YP_003219524.1| abc transporter, atp-binding protein; abc transporter,atp-binding protein [Clostridium difficile R20291]
MNTILKVNNITKTYNKGQQPSLDKVSFNVSEGEFIGIMGASGSGKTTLLNVLSTIDKPTSGDIFINNINL
KSLNDTCAADFRKDNLGFIFQEYFLLDSLTIFENISVPLTLQKLNPDKIENMVKSLAERFDIASQLNKYP
NELSGGQRQRASAVRAIVKHPSILFADEPTGALDSNSATELLHSLQEANEELKTTILMVTHDAYAASFAN
RILIFKDGHIIKELNKQPNNRHTFYELIIQEIAKLDTKR
>gi|260688391|ref|YP_003219525.1| abc transporter, permease associated with salivaricin lantibiotic; abc transporter, permease associated with salivaricin lantibiotic [Clostridium difficile R20291]
MNIFYMAIKNLKKNFSFYSLYLLSVSFVITVFFAFTSFSVNKIMLEKISTDGRVESMCNVISIFLMAFVI
FYMAYSNRFFLRRRTKELGIYALLGYRKFTILSLLTFENVLICSGAFITGLVLGALSHKGIVFGITALLN
LSIDNSQIPFFNINAINKTIIFIALVVLVLAISNGKFLYKTSLVKLIRHEKSAEKKLKFRKIPAFMGFIM
ILSGYCLSLDILRGAKSVWVSIGFYQMGLITMIIIVIGTVLFINSFLPYIMQKSKKNKRTFYTDMKIIAI
PNFIYRIRSNSKTLIMLTLLSATTLTVSSVMALSLYYPIASVSRIAPSEIEFRVEKNKQIEDVKQIVSQY
TSNTDDIIFTQTNIYKVKSSSKDLPFEYEIGTSKNNLSNSSSSKEVISRESGFECISFSDYYTLLKAQNR
TKLLKQLTPLRDNECILMKYQPNNDGYSENGTIYPLLINGKETPVAVRETSLNNAISFANSVGTLIVNDS
IYEQIAQNKLPMTSILSINGKSIKNNENLYSNISDYLDGSPYLQGYSHRINDLLSINSSTFLLIGFLVVL
FFIAVGSILYFNNISAISDSTSDYKILQKMGYDNIQIKKIIKKQVLPFFNIPFLLGILDCIFATLVYKTA
LMQNLLGNSFSQYIPVIIAIFLTSVVYLIYYILTIKSCCKIVLKN
>gi|260688392|ref|YP_003219526.1| possible sensor histidine kinase [Clostridium difficile R20291]
MTNFNLKILFLGNYILSLLFMGISTSTETYMNIQSIIPLIISTLLLIDITYITSCNVRENNIISLFCGLL
ALDSWYLLLSFVTTPIGTIIFKILSTVIVYVSIKFIFLFLFQGSGYNFRKITDILLLITCIGAIVGAFIS
NRTYACMYGIQFVVSIISFLYIIFYHLKRVVFVIKSEKKPISISVFITIIGFLTYYFFTLRISNHIGNFG
IYLTVLVFFMSIHGIALKENDSFPISTVFNIKQRAIFLFISILVISLVVLFANGNFSIILIAINVLFMLI
FLCNIILEFNLRDEKNKVVKNSKYTFALEKLQQEEQLKTEFSNFLHDDILQNLLSIKNMMSKSYRPEVQD
IIYETLNNLNTCIRNQMQDYHPVILKNLTVKENYQNLIESVSSSFPQKNICVSFKCSDTLFLVEPYDILI
YRLIKELLTNVYKHSNGSHAWIALALEKNIIKLNINDNGVKNTSFKTPLDITKITFDIIKHKGIISIKEQ
VENLGGTISISDNIPHGVCVQITIPMKGDGSYKYFVS
>gi|260688393|ref|YP_003219527.1| salavaricin two-component response regulator [Clostridium difficile R20291]
MVLINILLVDDHMLFAKSLSIALEEYEEIEQFYSTQDIHNLSEMIQDKKIDIVLMDINLRGLSECDGLKV
AYNLLETNSTIKIIILTGYDLPVYKHEAKKIGIYGFLNKNISPDSLIDSLLKVYQGVTCFPSENTEVIIE
DLTNMEKRILQLICSGKKRKIIADELYISERTLSNHLQHIYDKLDVSSSVEAITKAIKMGYISPVY
>gi|260688394|ref|YP_003219528.1| putative phage-related protein [Clostridium difficile R20291]
MSNSFYQLNSAVLYFNEKRDVNRIRFNHYVMRKENIQRLKGTLPRGQFMMTVRKAASDLDVSISTISRLV
NEFIDLGILRLISRGVKGNCCSVYSYVCSENSNAEIVTKNSDIFKNIEKYIDATINNNQKTMKYKHRDEL
FKNSNTNTYSRINQESIDKDYDLIIHTGYETENETKKKELLKNNLNKKNLNKNTFENLDEDLTEDSTYKN
PESIHEIIIRKLNSESGKNFKADLSITKALIDKRLKEGYSLEDFYKVIEAKVRRWRYTDMEIYIEPTILF
GYEFESYLNEESSLSACNYGDMCYEDMY
>gi|260688395|ref|YP_003219529.1| AraC-family transcriptional regulator [Clostridium difficile R20291]
MTNAKSKKEYLNRICKVQDYIEEHLHEPLSLDELSNIAGFSKFHFHRIFKAIEKETLAQYVNRLKLENAT
AFLIHRTDMTVTDIAHYFGFTDSAVFSRAFKNYYKISPIKYRNNYSKNCKEPYKISQYNRSISKPKCKNT
REVKGEIEILELDNMNTIYTRYTGSYGNLTSTFPKLLERLFTYASEQNLLGLENTQILAIYHDNPQFTQE
HQLRTSICMTIPDNIVVKENDNLGNMIIPSGKYLVGHFDISKSEYSDAWDFMYNEWLSNGNYKLRASFPF
EVYLNNPHNHPQNRHFVDIYLPIEPF
>gi|260688396|ref|YP_003219530.1| putative excinuclease ABC subunit A [Clostridium difficile R20291]
MKEIKINGAKIHNLKNIDVSIPKDKLVVATGVSGSGKSSLMFDIVFEEGRKQYLQSLGILAGIDSEDKFD
NIQGLAPTIAVQQNIIRQSNPRSTVGTRTNILNMLALLYSVEGQIMCTMCDTPVSDNLICNNCGYEEERL
RPSYFSYNSSDGMCMKCSGHGAYFEINIEKLVLDKHDTLKQVLDRAKITPGYLRVFSKKFNDYLDIQFLQ
LPEEIRNEVLYGHYENGKKSSSLSKVFHNRYKRGEDLNGVYTMTACSDCNGFKIGEEARRVLLNGKHIGE
LGKMTILEIDDFLKILINQGNLNTFGTNLVNDILSKTRHLIESRLGHLSLYREMSTLSGGEMQRLFLNSH
LDSEMDSLIYVLDEPTAGLHESEKIDILKSIKKLKDLGNTVIVVEHDKNTIEMAEHIIDIGPKAGVEGGQ
LVYQGDLEGLLQSDKSLTGQYLSGKYPMPNRTSNKNITHTDKIPCITIQNANTNNLKNVTVSLPLGAMVG
ISGKSGSGKSSLISDTLLPLLRSQFNNHTINNQINSSDSEIGDEDDYAVIETIADRLIGTKHISGYSEIS
QSPIGKNMNSTPASYIGIWDKIRTLFAGQPESLERGFTAGHFSFNSKGACPKCSGSGYEKVWLGNNLSID
HICSECQGKRFNDESLSIKYKNKNIHDILNMSVSESVHFFKDIPNIVSHLNVLEQIGMGYIKLGQPTPTL
SGGESQRIKLAKEIGKKRNGNILYVLDEPTTGLSLYDTSKLIQLLDELVENGNSVIVVEHDIDVLNVCDW
IVELGPEGGDKGGYIIAEGSPKTLKENPKSITGRYL
>gi|260688397|ref|YP_003219531.1| putative penicillin-binding protein [Clostridium difficile R20291]
MNKNNCLDLIFEKVDPSSVGMSSEKLSQLEPLIISQYSNINGIIIARKGKVVFEKYYNGYNADDTFHVAS
VTKSIISALIGIAIDKGYIKDVDQKVVDFFPEYTCSPSEICKKAVTIRHLLTMTAPYPFKNMTESLERLC
KQKDWIKYTLNQLGQKGEIGTFKYSSAGTHLLSAIITKTTGKSAREFANEYLFKPIGMKVIPDYDMKDFG
FEDFFGKNLKGWAKDRQGYSIGGWGLTLSARDMLRFGFLYLNDGIWNNKRIISKSWIEESVKMNSNEYGY
LWWICKKDGVLWYSAMGTGGNAICCIPQYDLVIAIPSKIVFKPRDRWEFIEKYILTSIID
>gi|260688398|ref|YP_003219532.1| MerR-family transcriptional regulator [Clostridium difficile R20291]
MDTYTTSEVADLIGVHPNTVRLYEELNLIPKPKRNTNGYRIFNDFHIEQFRFARTALKIEVVQRGLRKDA
LEIVRTSANRDFDKAISLVNQYLQQLEIEKSNAEEALTIVAQILNGNTPETNKLFLTRKETAEHLNVTID
TLRNWEMNGLLKVKRKQNGYRVYTDEDIKRLKIISALRCANYSLSAILRMLNALSSNPNTNIKTVLDTPK
DDDEIISVCDKLITSLKEAEHNAKTMKSHLQIMKKQFS
>gi|260688399|ref|YP_003219533.1| multidrug resistance protein [Clostridium difficile R20291]
MLSLRARKIQHTNQRRNRMENKNTNSTWKKKVILFLASQYISLFGSSLVQMAMIWYVTLQTSSGVWVTVL
TVCSFIPQMIISFFAGVWADYYNRKVLIIVSDSTIAISTLVLILFMMSSNGTTSELIAISVISVIRSLGS
GVQTPAVNAMIPQLVPEEHLMRFNGINSSLQSIVQFIVPIVAAAILGFGNKINQVLLIDVFTAIIAIVLL
IFIKIPKHNIPKQTEKVSFFADMVSGIKYCFSDKFIRKVLFTYGAFMLLCVPSGFLIGLLIERTFGKGYI
YLSIIEMIGFLVMVLGGLIIGVFGGFKNRNKTFFLAILSYAIFSIILGLVTQAWQFFIFMFFTNFSIPII
QASAMTMLQEHVAPQMLGRVLSLPIIIYTGFIPLGMMIFGPMADVISINNLIIVAGIILLFFALAIPYSK
QFYKQGISKSNESE
>gi|260688400|ref|YP_003219534.1| putative ABC transporter, permease protein [Clostridium difficile R20291]
MCIISFFLPVVMAILINFMGTIDISSLGEIRFGIVKDTLPVQTEQWLKKYGMVSVYDTKMHLIREIKDIK
TDTIGVVRDGKGIKTMLYGNEINAIKNVGKTLPEMFRLKGDLKDVEVTILPKDSILKEFQNVFIAMILIT
AMFMGCTFNAMNIISEKEDGISFINEVLPQSRSQYIIQKVFLGLLCGCLSSMITVFICLDISILDMIMML
LLVVFSAFISSLIGLFIGKLSEGLMVGIVYIKIVMILFIGAPLLIYLLGVNTSGIGNLCYIMPSVATFNG
IMEIINGNVIIIKDIVILVVHCVVWFMIYIILDKKRKLSFSR
>gi|260688401|ref|YP_003219535.1| putative ABC transporter, permease protein [Clostridium difficile R20291]
MYSKFFTLVKKDFWMMIYGKFFVLTLGSLILYSCYINFGYVKFMDEDSYHNNVYLYNPENISMSASPLIN
QVSSIGELKAKLDEDTSAVCIDMSSSKPKVILHESIKGVDNYRADYALSLLSSEKDHNSKISDNNAIIQI
NDKDTSEIKQRKDMTCEILFFEIVAIGFLGIASLLFKEKQMGVMRITGILPVKRSLFILSKIFAFLICDL
CFTVLLVVFNIGFFEGVKILPQVLVQASILSIIMSLIGIGCSMLLRDFKQFSLIYLVVAVFITTPIFLSA
NTSFEIDWIKYHPFYHVYSQLKNAFFMNFSKELVYFVVCSLTIIVLFLLVKYIFNKELVREG
>gi|260688402|ref|YP_003219536.1| ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MIKVGELKFSYGKDKQILHGLNFEVKEGEIFGFLGPNGSGKSTTQKILNGVLKGYNGHVSLFGKEVKAYT
ESLYQKIGVLFEFPYLYTNLSAIDNLEYFSSFYPKNQRRDIYELLDLLEFKKEFINKPVSSYSKGMKQRI
SMARALVSNPKLLFLDEPTSGLDPSGAVLFRKIIEEERKKGTTIFLTTHNMLDADLMCNNVAFIADGKIM
VIDKPKNLKMKNSNNKVEVEFVYNGNRDIEIVDIQELESGITFKYDEILSVHSKEPTLEEVFIKYTGRML
V
>gi|260688403|ref|YP_003219537.1| two-component sensor histidine kinase [Clostridium difficile R20291]
MNSLRKIIEKLKNVDISNWIKQNFGLYSVRKKVFLLSKLSGALIILFYLVVEEFSINSKFEFWIWFIILV
IFIMSIDFLLGKFISEPITSINKSAKSMSQLDFSNPCTVNTNDEFGELSRSLNTMSTNLQQALSDLESAN
IQLEKDVNKERMLLEQRKELVDAISHEMKTPLGIIRAYTEGLMDEVDEEKKKNYMNVIIEETDRMNNMIV
SLLDLSALEAGVSKLNPERFDFIEFVETVAGRLLIDIPDANFYFTYDLPEYEVFVVADKMRMEQVVENLI
INAKKHVVYNGNLDLSITCENGLLLFEIYNDGRIIEQDEISKIWSKFYRSVQSQRKGGSGLGLAIVSQIL
TMQGLEYGVNNRDRGVEFYFMIPIDE
>gi|260688404|ref|YP_003219538.1| two-component response regulator [Clostridium difficile R20291]
MAKILVVEDEKRMQSIIVEYMQKGGYTCITANDGVEALTILKSNNIDLMILDIMMPYLDGFSVCRVSREM
TNIPIIILTAKGEEEDKLKGYEYGADDYITKPFSPKVLLAKVNALLRRYTTDIPKNSLSLGKIFIMVASR
QVYVEDKLIDLTYKEFELLRLFMENPNQVFSREKLLNCIWGYDFEGNTRTVDTHIKTLRKKLGSEGHHIV
TLIRSGYKFEVKE
>gi|260688405|ref|YP_003219539.1| hypothetical protein CDR20291_3064 [Clostridium difficile R20291]
MDFISSILQGLLSILFNFTGDFGISIVLITLIVKLVLMPLSLKQRFSVKKQQELAEKMEHIKEKYKNDTK
ELEKQIQVSSVESMKSMLGCLIVLVQMPVVYALYHVCLDMTKEFTTIIIPWIANLGTFDNLFILPCIYTL
IMLASNLVNYIPYLKINSQVKFNKQMAVVTTITSLILTVRTPVAIGLYFITSAIYSLIEDICFRMYFNRK
NRIVTK
>gi|260688406|ref|YP_003219540.1| putative nitroreductase [Clostridium difficile R20291]
MISDSISKRRSIRKYKNQSISHETIEKIIEAGINAPSSKNRQPWRFVVITEKEKESMLKAMSKGIQNEIN
DNGLLPGSRQHIAGANYTVEIMKQAPVTIFILNILGKSPLEKLSPEERFYEMANMQSIGAAIQNMSLTAV
ELGLGSLWICDVYFAYRELCEWLNTDSQLVAAISLGYPDEEPSRRPRLQLSDVTEWR
>gi|260688407|ref|YP_003219541.1| putative Na+ driven multidrug efflux pump [Clostridium difficile R20291]
MEEKYKEPLEYEKVSKLLTKYAIPSIIAMLVSALYNIVDQIFIGQGVGVLGNAATNVTFPLTTICTAIAL
LLGIGGASKCSLELGAKNSEKATKAAGNSICLMAVFGISLFIVVSIFLTPLLKFFGSTSEILPYAHTYTK
ITSIGLPFLIMSTGMSKLILADGRPKASMFCMLIGAVINTILNPLFIFVFNMGIAGSALATVIGQLISFG
ISVHYIKNFQHIKLHKKSFKLDSIIYKHIFALGSSSCFNQLAMTVTQIVMNNTLAYYGARSVYGSEIPLA
CVGIIIKVNMIFISIIIGISQGMQPIIGYNYGAEKYNRVKEAYKFAVGSATIISVIAFLCFQFFPRQITS
IFGNGNETYFIFAEHYFRTFLFLTFINGVQIVSSTFFTSIGKSVLGLFTSLTRQILFLIPLIVILPMFMG
IDGVMFAGPIADAAAAMVCIYFAVHEMKSLTIKQNNLMSNHNKIAEV
>gi|260688408|ref|YP_003219542.1| MarR-family transcriptional regulator [Clostridium difficile R20291]
MRTIDIKGENMRELLKWVSIINRYNTNYIDRKLADIGINNSQYFYVLHICNNPGITQDTIFEKILVNPSN
ITRALANLEKEGFITREPGVKDKRTWHLYPTEKSLECYDEILKITNGYVEELLSSFEKEEQELFMSMLKK
VAFLAIDMNEEAKLEAKENGRKI
>gi|260688409|ref|YP_003219543.1| PadR-family transcriptional regulator [Clostridium difficile R20291]
MLEYIILGFLMEKELSGYDLKQIMSESTSYFFDASFGSIYPALKRLETKGYIHYHEVIDGSKLKKLYSIT
NTGKEVFLEWLKKPINFSKTKQDHLVNIFFYKYLPKEIIETNLKMLITEVELLLNKLSKQKIDVEENHCI
DQYTYMYATMIYGVDYYNFVINWCKDLLKNL
>gi|260688410|ref|YP_003219544.1| hypothetical protein CDR20291_3069 [Clostridium difficile R20291]
MDFMKLLIHDLTDKELEKLLPKLDDNIKILPNTKEIHKCIGRFGCWIKTPSECVVKDYYSNMGKLINESD
GIIIISRCCYGGFSPFVKNVLDKSINYILPYFVIKDNMMRHKSRYDKQINLKAIFYGDCITEAEKETATK
LVNGNAINFNIKEHSVCFYENIQDIRGESI
>gi|260688411|ref|YP_003219545.1| hypothetical protein CDR20291_3070 [Clostridium difficile R20291]
MNIVMINGSPKVNKNNSQYFLSELKQLIQNDNKVFTFKVDSTSKYPDALNAILNCDRLIIAFPLYVDGIP
SHLLHFLEKCEKFLKTQNKKPIPVYAIVNCGFNEGEHNHLAIQMIDHWCKKINFTWVQGIGIGAGEMFGS
LESVPLGKGPKKDLGIALKELSKNILSDNIHIDDSNKSTIFISPNFPRFLYKLMGNHQWNTQAKSNGLTK
SDILKK
>gi|260688412|ref|YP_003219546.1| hypothetical protein CDR20291_3071 [Clostridium difficile R20291]
MNNTVKEKLAESLTSDTTDILPYLPYLLQDFWELGSSPEQMLQLFRKHIPFNEDTKVLDLACGKGAVSVK
LAKELNIHIKGIDLIPEFIDYARRKAIEYKVDALCDFEMNDANSSVKIEHDYDCVIFGAVGDILGNYKET
ISKLLPTIKSKGFILIDDAYVVDKSTNEQLNFERVYPTYNEWCILFKELGLKLIECIPCLELENDVEEEM
NWIITRANELIKKYPSQKDMFEQYVISQKNEYTDLQQDLVGATWILQKE
>gi|260688413|ref|YP_003219547.1| hypothetical protein CDR20291_3072 [Clostridium difficile R20291]
MNVENELLKNLDRLHTTELGVVRIKKNLSLETNDVVNWCKTKIESPNAIINRKGKNWYISVYDCIITVNA
HSYTIITAHKEKK
>gi|260688414|ref|YP_003219548.1| AraC-family transcriptional regulator [Clostridium difficile R20291]
MDNNLITIEKTLDYIEKHLLDEMLDLNVISKEIGYSKYHLHRMFTSVVGFSIHNYIQRRRLTEAARMLIF
TEKPIIEIALISGYDTQRSFSTGFKKMFKHSPKFFRKHQDFLPLQLKFDINNRKRLHGGMVLDVKKVNCT
DINIVGYSGKVKKGFHVIGKCWRDLHKNKELIENKVDLDFLIGVNDYSNFKEIENNPTFTYIAGVQVATF
GKFLMEWKNSYYRKVIILFLLLLGKMRIVCKML
>gi|260688415|ref|YP_003219549.1| putative osmoprotectant acid ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MTPIIQFKNIKKQYNDKTIIDNLNLDIEKGEFLTVIGSSGSGKTTLLKMINGLILPDGGNILINQTDIKN
EDLIKLRRRIGYCVQGSVLFPHMTVEENISYVPNLLSKKNKLEVKSAVNKWMEIVGLPNDMKVRYPSELS
GGQQQRVGIARALASSPEILLMDEPFGAVDEITRKQLQKEIKEIHKKTGVTIIFITHDIYEALILGTKTL
VLNHGVVQQYDTPENILNTPANQFVDQLLNIRKSIIDDDNLKE
>gi|260688416|ref|YP_003219550.1| putative osmoprotectant ABC transporter, substrate-binding/permease protein [Clostridium difficile R20291]
MINDILTLLSERSDFFIKLSIEHLMISIISIIIAIVLGGIIGIIVSEFHNSSKPILGTINFLYTIPSISM
LGFLIPFSGIGNTTAVIALTIYALLPMVRNTYTGITNVDKNILEAARGMGSTDFQILYKIKLPLALPVIM
SGIRNMVIMTIALAGIASFIGAGGLGVAIYRGITTNNTAMTISGSILIALLALIFDFILGLVEKFFQRKR
KKKNRKKVFAILGSLILIATIFTSYLFNPSKTQTIHIATKPMTEQYILGEMLDILIEKNTGLNVEITQGI
GGGTSNIQPAMENGEFDIYPEYTGTGWNMVLKKNELYTESMFSKLQSEYKTKLKMQWTGMYGFSNSYALA
VRKEVADKYNLKNISDLKNVSSKLTFGAEYDFYEREDGYTPLCNTYGLNFKDTVDLDIGLKYQAINEGKI
DVMPIFTTDGQYSVSDVIVLKDDKNFYPSYQCGNVVRLEVLEENPELSEVFKMVGDILTDKEMAKMNYDV
ENNNLEPREVACEFLNKKGLL
>gi|260688417|ref|YP_003219551.1| putative nogalamycin resistance protein [Clostridium difficile R20291]
MSNEFIILKGCKENNLNNISLKIPKRKITIFTGVSGSGKSSIVFETIAKESQRQLNERFSTFVRSFLPKY
GEVKADCIENLSTPIIIDQSRLGGNSRSTLGTITDVNSFLRALYSRFGSEYIGNANMFSFNDIDGMCPHC
HGLGKKLVPNMNQILDMNKSLNEGAILLSGFGVGSWHWNIFAESGFFDINKRICDYSEVELEKFLHGKAE
KIKIENAGQTNMTYEGLMVKFNRLYLSRDGEISEATKKKLSKLLIEDRCPICDGRRLNEGVYRSLINGYN
IADLTSMQIDELAEVIKSINEPEAQPLIKGIIEKLNSIIDIGLGYLTLDRETSSLSGGESQRIKMVKYLN
SNLVDLMYIFDEPSVGLHPKDVYKLNNLLKKLRDKGNTIIVVEHDPDVIKIADHVVDVGPKAGKYGGKVV
YEGSYKNLLTSGTLTGNALSKFLPIKESVREHSGYLEIKNCNKNNLKNVSIKIPKGVLTLVTGVAGAGKS
TLIKDEFLKQNPSAVLIDQSPVSANSRSSLATYSGIMNNIRSIFSKTNGVNASLFSSNSEGACDNCKGSG
IVEMNLAFMESIKSTCNVCEGKKFKKEVLEYRFQRKNIIEVLEMSVLDAIEFFNLKQIKTKLQCIEKMGI
GYLTLGQTLDTLSGGECQRLKLASELNKESSVYILDEPTTGLHMADIENFISIIEEIVDNGNTVIIIEHN
IDVIKRADWIIELGPEGGTKGGRVIFEGIPKQLCNNKISLTAKYIV
>gi|260688418|ref|YP_003219552.1| hypothetical protein CDR20291_3077 [Clostridium difficile R20291]
MESKTKYIGISILILLMIFLIAKNFNGKLEIPIPESNSRKFKSAAVFYPQHQDDEVLWGGSAIVDAIKQC
GVDNVYVVLVSDGSGVNVFKANTKFRNLTRKQKEELRNNEFKSALRELGVKPQNVIILADIDKKEGTHYE
LMEKTILDFEHKFKGNVTHIAHHYKYDDHIMHRKNGEVLKKLKREGKIKDDLYFVKPKYVKYIPRNERAI
YKAMDFDDYNKVKSACYEYKVVNSKRKMYGIGYISAHSYFEHLLNDPELTSVLSED
>gi|260688419|ref|YP_003219553.1| chaperonin [Clostridium difficile R20291]
MRDYVLRATSGNGQVRAFVATTRNTVEEARRLHETTKVATAALGRTLTATSIMGLMMKNDSDKLTVIIKG
GGPIGTIIATSDSKGMVKGYVGNPQVEVEDYPNGKLNVAAAVGTEGVVKVIKDLGLREPYNGTYPLVSGE
IAEDFTYYFAVSEQTPSVVALGVLTKEDEVEFAGGFIVQLMPDAEEETIAKLEENVAKLPSITNMLKEGK
SPDDILNIVLDGLEPKILDTCEVGFMCECSKERVKTALVAIGKKSLAQIIEEDKKAEVGCQFCNKKYMYS
EEELLEILKEM
>gi|260688420|ref|YP_003219554.1| putative methyltransferase [Clostridium difficile R20291]
MNVDGQDLQLRKQEELEVCLHHAKRGLKRLWRSRIKRMSQYSDFAFVYDELMNEVDYNGWVKYIEDIIDS
EGVKVKNILELACGTGNLTIPLTKKNYDIAGIDISDEMLSVAREKAEKEGVELVLLQQDISELDFEISDL
DCVLCACDGFNYITYDDDLENVFSKTYELLKKDGIFIFDISSFYKLANILGNNMYGENREDIAYMWQNYF
DEEENLIEMELTFFIKDECGKFERFEEIHQQRAYTEDEIVDMLEKSGFKDIKYYGDFTFDKPSEESQRIF
FVCKK
>gi|260688421|ref|YP_003219555.1| small acid-soluble spore protein [Clostridium difficile R20291]
MIFLKEKVQREKKITNGKNTKILTNDDIMKYEIASELGLMDKVGERGWAGLTAKEAGRIGGMLTSRKKRL
KKIVEEQNKKDESI
>gi|260688422|ref|YP_003219556.1| putative amidohydrolase [Clostridium difficile R20291]
MREASYLQEQLYKHRKSLNPIAEIGRKEYKTSKYIRDYLDKLGIEYEVYLETGIVGVIEGKRPKKDIAFR
ADIDGLHSEEGVKHLCGHDGHATILLGLIEYLNDNKEDLNDNIVFIFQPAEEGPGGAKALIDEGVLRKYN
IDEIYGLHIYPELPEGYVGTREGYFMAQIGDIDIEIVSKSGHGAMPQNGIDGIVIASNFVSSLQTIVSRN
ISPIDNAVLTIGRIEGGARRNIIAENIKMEGTMRCFSPEVYEKMKLRVRELARGFELAYNCKVNINIIDD
YIAVKNDKDLYQEFVEAIGSDTVVELEPLMISEDFSYYQKEVPGLFFMLGSRNEEKGFVNGLHNINFNFD
EKICVNALNVYSKLLKYKEAID
>gi|260688423|ref|YP_003219557.1| L-serine dehydratase [Clostridium difficile R20291]
MDTLKELFKIGSGPSSSHTMGPQRAAERFKNENPDAESFRAILYGSLAATGKGHLTDYIIEKTIAPKKVE
IVWEEDIIKDFHPNGMKFEALDKDKNVTAEWTVYSVGGGTIAEEGQRNSKSNSIYHLDTMDEIVKWCKEN
NKTLVDFVLECEPKDIKDYIKTIKDAMRKSIDDGLSTDEIIPGKLLLKRRASTFYNAYKKDKSFSTLVYA
YALAASEQNASGNIIVTAPTCGSAGVIPGIFFAMQDFYNYDDEKIIEALLVAGIIGNIIKTNASISGAEV
GCQGEVGAACSMAAAAVAYLKGGTIDHIEYAAEIALEHHLGMTCDPVYGYVQIPCIERNAMAAQRAYDAA
NYALLTDGSHSVSLDQVVETMKETGIDMMDKYKETAKGGLAKHFFSC
>gi|260688424|ref|YP_003219558.1| dihydrodipicolinate synthase [Clostridium difficile R20291]
MLFKGSAVALVTPFTEDNNVNFEKLGELIEYHIENGTDALVVCGTTGEATTMSESEIFAVIKYTVEKVNK
RIPVIAGTGSNNTMLSVHMSQEAEKLGVDGLLIITPYYNKTNEKGLKLHFETIANSVKLPIILYNVPGRT
KVNIKPSVVAELAKIDNIVAVKEASGDLAQVAEIAKLVPKDFAIYSGNDDTILPLLSLGGSGVISVLANI
CPKETHDLVTKFFEGDIEGSKKLQLDMDALIAALFIEVNPVPVKTAMNILGFNVGDLRLPLAEMEETNLN
VLKQELTNFGFKF
>gi|260688425|ref|YP_003219559.1| aspartate-semialdehyde dehydrogenase [Clostridium difficile R20291]
MKKVNVAIVGATGMVGRTFLKVLEERNFPIENLFLFSSSKSAGSKVMFCGKEYIVEELKETSFTDRGIQI
ALFSAGGSISEKYAPIAASNGILVVDNSSQWRMNPDVPLVVPEVNPEAIKNHKGIIANPNCSTIQAMVPL
KALDDKYKIKRVVYSTYQAVSGSGVKGVEDLEKGMNGNPTGFYPHQISYNCLPHIDSFTENGYTKEEMKM
VNETMKILDNYDLKITATTVRVPVKNGHSESINVEFNNPFELDDLVKTLEEAPGVVVVDNPAKNEYPTAV
EFDDRDEVFVGRIRRDFSVDNGVNLWVVADNIRKGAATNAIQIAEMALSYDLV
>gi|260688426|ref|YP_003219560.1| dihydrodipicolinate synthase [Clostridium difficile R20291]
MIFKGSAVALVTPFTKDNKVDFDKLGELVEYQIANGTDAIVSCGTTGEANTMTDEEQLATIKYVVEKVNK
RVPVIAGSGSNDTMHSVNLSQEAEKLGVDALLIITPYYNKANKAGLKRHFETIANSVKLPIILYNVPGRT
CVNISPSLIVELAKIDNIVAVKEASGDLGQVAEIASLVPDDFAIYSGNDDTILPLLSLGGQGVISVLANV
CPQETHDLVAKFFEGDIEGSRKLQLGMDALIAALFIEVNPIPVKTAMNLLGFNVGDLRLPLAEMDPANLE
VLKKELVNFGLKVNA
>gi|260688427|ref|YP_003219561.1| dihydrodipicolinate reductase [Clostridium difficile R20291]
MLKVIATGYDGKMGKILADTIREDNELELVCVAARGLDSYEGDLKIYEDMSTIVEEADVVIDFSHHSNLD
NILSYVLKTKTPLVIATTGYNDNEMNKIREAAKVIPVFQSYNMSLGVNVLVKLVKDAAKLLEGFDIEIIE
KHHNRKVDAPSGTAVMIANAIKEVLPNVENNYGRYGRSAKRQPNEVGIHAIRGGNIVGEHDALFAGDNEV
LTISHQAQSRGIFASGSIAAAKYLVKQKPGFYNMDSMLG
>gi|260688428|ref|YP_003219562.1| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [Clostridium difficile R20291]
MVNLNDAYEIARYIKEVKKKTPVKVYVNTNSLHFQSTDKFKVFGSNGSYIFVGDYEDIMEVLDKHGNDIT
DTHVEYDRRNSAIPLKNTLNEHARIEPGAIIRDMVTIEKNAVVMMGAVINIGAVIGEGSMVDMNAVIGAR
GTLGKNVHLGAGAVVAGVLEPPSATPVIVEDDVLIGANAVILEGVRIGKGAVVAAGAVVTTDVEAGAVVA
GSPAKVIKMKDEKTADKTKLMEDLRNLD
>gi|260688429|ref|YP_003219563.1| hypothetical protein CDR20291_3088 [Clostridium difficile R20291]
MGVIDMLKEEKTYQEKDAKVFNGVAALIMIVLFLVVSIGIMVFGIVKLDSGFTGIGSLMLILGLVFIVVD
FILFFGLKMINPKEAIVLVLFGNYYGTIKKEGYYWVNPFCSAINPAVSRINVSKSSSDEKVDISTNSRGK
KVSLKTMTLNNEKQKVNDLLGNPIIIGVVVIWKVINATKAVFNVDNYNTFLSIQCDSTIRNVSRLYPYDV
SEDGDEKSLRGSSQEIADRLKDELQSRVDIAGIEVCEVRITHLSYAPEIAAAMLQRQQAEAIIAARKKIV
EGAVSMVEMALTNLSENNVVTLDEERKAAMVSNLLVVLCGNKDAQPVVNSSSIY
>gi|260688430|ref|YP_003219564.1| dihydrodipicolinate reductase [Clostridium difficile R20291]
MGRVLAECVKKDNELELVCGVARSADEKGHHSDTKLYKTMTDVTEKTDVIIDFSHHETLEPILSYALKNN
TPVVLATTGYDENDLNKIEEASKNIPILLSSNTSLGVNILIKLVKDASKMLEGFDIEIIEKHHNRKEDAP
SGTATMIANAIREVLPESENTHGRYGRDCKRKPNEIGIHSIRGGNIISDHDVIFAGDNEVLTLSHHSQSD
EVFANGSIVAAKFLIGKQSGLYKMSDILG
>gi|260688431|ref|YP_003219565.1| exosporium glycoprotein [Clostridium difficile R20291]
MSDISGPSLYQDVGPTGPTGATGPTGPTGPRGATGATGANGITGPTGNTGATGANGITGPTGNMGATGAN
GTTGSTGPTGNTGATGANGITGPTGATGATGANGITGPTGNKGATGANGITGPTGATGATGANGITGPTG
NTGATGANGATGLTGATGATGANGITGPTGATGATGANGVTGATGPTGNTGATGPTGSIGATGANGVTGA
TGPIGATGPTGAVGATGPDGLVGPTGPTGPTGATGANGLVGPTGPTGATGANGLVGPTGATGATGVAGAI
GPTGAVGATGPTGADGAVGPTGATGATGANGATGPTGAVGATGANGVAGPIGPTGPTGANGVAGATGATG
ATGANGATGPTGAVGATGANGVAGPIGPTGPTGANGTTGATGATGATGANGATGPTGATGATGVLAANNA
QFTVSSSSLGNNTLVTFNSSFINGTNITFPTSSTINLAVGGIYNVSFGIRAILSLAGFMSITTNFNGVAQ
NNFIAKAVNTLTSSDVSVSLSFLVDARAAAVTLSFTFGSGTTGTSPAGYVSVYRIQ
>gi|260688432|ref|YP_003219566.1| hypoxanthine phosphoribosyltransferase [Clostridium difficile R20291]
MDIETKKWEVLYSEEKIKDKLRELGAIIEKDYKDKNLMVVSLLKGSFIFCADLVRNINLPLRVNFMTTSS
YGNNEESTGKVKVVSDVTTDIAGYDVLVVDDITDSALTMDFVLKHLKAKNPASLKCCVLLDKPSRRKVDL
VPDYCGFEIEDKFVVGYGFDFGDYYRNVPYIFNVTDEDR
>gi|260688433|ref|YP_003219567.1| hypothetical protein CDR20291_3092 [Clostridium difficile R20291]
MRDIRKELVEMLKAEVKPAVGCTEPVALALACAKAKELLGEEIVENRMLVSPSIYKNGMCVGIPGTERLG
LKIAAALGIVGGHSENGLSVLETLTKEEVKIAEDYMDNTPLSITPADTREKVFIEVVLKGKNHIAKVRIR
TKHDNFTFLEKDGEVLLDNEPKVSASNDAAEKAESLMDTVTIQELIKNVEEIDFKDIEFLLDGVKMNEEM
AEYGLKQKTGIGVGYGIKKSIEEGLLGNDVINYAMMLTAGASDARMAGVKMPVMSSNGSGNHGLTAILPI
VAYNKKFPQSDEKLAKALAISHLVTGYIKNYTGRLSAVCGCGVAASTGATAGISWLMNGTEKQIEGAIEN
MIADLSGMICDGAKAGCALKLSSAASAAIQSAIIAKQDCFVPPLNGIVGSSVEQSIQNLGRVSDKGMSIT
DEIILNVMNDMNKVD
>gi|260688434|ref|YP_003219568.1| putative sigma-54 interacting protein [Clostridium difficile R20291]
MMVMIGLEYIKSDIQNIAEAIVSVLNIDVTIVNKELFRIAGTGVYIDKIGEKVDKYTAFKKSLTEQITIL
IDDPKSSDVCRECYKSGACVEFAEVCCPIICDGDSHGVIGLIAFTKEQAQIIENNKSGLINFLGKMADLI
SNKLKAQIKTYELELEKKKLETLLNNMDKAVVSIDVDGKIDKYNSKFKELFNIKDSITGKNIFVELDFIK
KPSINNFKKDKSCSFFYKRYGYDSKGIYNINKIVLKNELKGYVIDFIDKRDAIKNYNKMNKDYRIKLENI
IGESVAIRNSKKEALIASKSTSTVLITGESGTGKELFARAIHNHSNRVDNPFIAVNCAAIPDNLLESELF
GYEEGAFTGAKKGGKLGMFEVAHKGSIFLDEIGDMSLHLQSKLLRVLQEKELNKIGSKSNVSIDVRIIAA
TNKDLEKMVQNGTFREDLYYRLNVIPIKLPSLRERKEDIPLIIKHMVKEYSKKLDKNVIDIDSRVVDAMM
EYKWPGNIRELQNIIEYSVNMSSSSIITMNVIPQKIKNTSVEELEVKSDRIIPLDELEKIEIIKALNKYK
DYKKDKELTAKALGISRATLYRKIEKYNIIS
>gi|260688435|ref|YP_003219569.1| hypothetical protein CDR20291_3094 [Clostridium difficile R20291]
MKSILCQINKQPVKAKYTSDELECFLDTIEYNVGDKILLVGHIGNLGKRLRGLGTSVTILENSNYEDVCY
SLVYNENCNVVKGKLEFLPFDDNQFNKIIIVDQFNVITDCEKASSEIQRVLKGNGEVILEDLNLKNLKVK
LNYLKHKFCGSVAKIHYPHEVFNIFSRLNFDGMIKESNKLKYIYVGKRR
>gi|260688436|ref|YP_003219570.1| single-stranded DNA binding protein [Clostridium difficile R20291]
MIAVKDENNVVNLRGELDNKLEFSHEIFGEKFYNMKIKINRLSDSFDILPMTVSERLLQDIDLDKQNLVN
VVGQLRSYNKTLNNKNRLVLTVFVREIKSIDEENKDPNSIFLDGYVCKEPVYRKTPLGREITDLLVAINR
PYNKSDYIPSIVWGRNAKFAKNLKVGDRIQLWGRVQSREYEKKIDENNVVKKMAYEVSISKIKKLDENNN
E
>gi|260688437|ref|YP_003219571.1| hypothetical protein CDR20291_3096 [Clostridium difficile R20291]
MVAILKALYVVFAAIFAVVFGKDVAKANKEGKLEEQSTPKVAVTGFITDFFDTLGIGSFAPTIAMSKALK
LNIPDKKMPGTLNVAHTIPVVTEAFIFTSIIPVDGVTLVSMVVAAAVGSYIGAGIIAKMDERKIQLVMGV
TLALTAILMLLGHPWINVLPGGGNELGLTGVKLVIGVIGNFILGALMTAGIGLYAPGMAMVYFLGMSAKV
AFPIVMGSCALLMPVASMKFIKEDAYTKKASVIIAICGLIGVFVAAYIVKTLPMDILKALVIVVIAYTSA
TMIMAANKNKKTA
>gi|260688438|ref|YP_003219572.1| putative proline racemase [Clostridium difficile R20291]
MKFSRSIQAIDSHTAGEATRIVVGGIPNIKGNSMPEKKEYLEENLDYLRTAIMLEPRGHNDMFGSVMTQP
CCPDADFGIIFMDGGGYLNMCGHGTIGAMTAAIETGVVPAVEPVTHVVMEAPAGIIRGDVTVVDGKAKEV
SFLNVPAFLYKEGVEVDLPGVGTVKFDISFGGSFFAIIHASQLGLKIEPQNAGKLTELAMKLRDIINEKI
EIQHPTLAHIKTVDLVEIYDEPTHPEATYKNVVIFGQGQVDRSPCGTGTSAKLATLHAKGELKVGEKFVY
ESILGTLFKGEIVEETKVADFNAVVPKITGSAYITGFNHFVIDEEDPLKHGFILK
>gi|260688439|ref|YP_003219573.1| hypothetical protein CDR20291_3098 [Clostridium difficile R20291]
MSFVGISTSMKNTSLHIFRDPLLDLIDNDSDIDLLGVVVVGTSEHNEWKTFLATRLGRWIESLRPDGVII
TLDMAGNQHIDFTNAIAEFVKSDIPAVGLTIMGADGLVITNPYLDKATIIDYKKTTGYIETEVVGDNHMD
EVDVKKALAFLKLKMRKDAK
>gi|260688440|ref|YP_003219574.1| hypothetical protein CDR20291_3099 [Clostridium difficile R20291]
MGIGPSTKETSLHHFRDPLLDIVESDKDVDLLGVIVVGTPDGNENKTFVGQRTAAWLEAMRVDGAIVSSD
GWGNSHVDYANTFEEIGKRDIPVVGVTFNGTQAKFVVSNQYMDTIVDMNKSKEGIETEVVGENNTNEIDA
KKALAFLKLKMRKHG
>gi|260688441|ref|YP_003219575.1| hypothetical protein CDR20291_3100 [Clostridium difficile R20291]
MEEKIMRRLVIKPFHMNEVNFGSKTSIKKDVLTIDLSSIDEIKEREELITDIKVDIIKPGDYDREINTIM
DIIPISTKVLGRLGEGITHTLTGVYVMLTGADEDGNQMHEFGSSEGILKDQMVFGRYGTPSVEDYIIHVD
VTLKGGLPFERTLPLAAFRACDDFIQEIRASLKMEDGRNATQVREYFDKIRPNAKKVVIVKQIAGQGAMY
DNQLFSKEPSGFEGGTSIIDMGNVPMIISPNEYRDGALRAMT
>gi|260688442|ref|YP_003219576.1| proline reductase [Clostridium difficile R20291]
MSLTTVQGLQSEIFVPITPPPVWTPVTKELKDMTIALATAAGVHLKSDKRFNLAGDTTFRAIPNTATVDE
MMVSHGGYDNGDVNKDINCMFPIDRLHELAAEGFIKGVAPMHYAFMGGGGNQHVFTEETGPAIAAKLKEE
GVDGVVMTAGGTCHRTAVIVQRAIEEAGIPTIIIAALPPVVRQNGTPRAVAPLVPMGANAGEPHNIEMQT
HILRDTLEQLVAIPSAGKIVPLPYEYKAHV
>gi|260688443|ref|YP_003219577.1| hypothetical protein CDR20291_3102 [Clostridium difficile R20291]
MDRLKYISSETFYEGIIVDIKGGGVTIDLKGRLGQFKIPNRMLITDYELKIGQEVGFMLSYPEVLSPEPN
QEYVENIRREKEKQAEMQSKQEEK
>gi|260688444|ref|YP_003219578.1| proline reductase subunit proprotein [Clostridium difficile R20291]
MSITLETAQAHANDPAVCCCRFEAGTIIAPENLEDPAIFADLEDSGLLTIPENGLTIGQVLGAKLKETLD
ALSPMTTDNVEGYKAGEAKEEVVEETVEEAAPVSEAAVVPVSTGVAGETVKIHIGEGKNISLEIPLSVAG
QAGVAAPVANVAAPVASAAAEVAPKVEEKKLLRSLTKKHFKIDKVEFADETKIEGTTLYIRNAEEICKEA
NETQELVVDMKLEIITPDKYETYSEAVLDIQPIATKEEGELGSGITRVIDGAVMVLTGTDEDGVQIGEFG
SSEGELNTTIMWGRPGAADKGEIFIKGQVTIKAGTNMERPGPLAAHRAFDYVTQEIREALKKVDNSLVVD
EEVIEQYRREGKKKVVVIKEIMGQGAMHDNLILPVEPVGTLGAQPNVDLGNMPVVLSPLEVLDGGIHALT
CIGPASKEMSRHYWREPLVIRAMEDEEIDLVGVVFVGSPQVNAEKFYVSKRLGMLVEAMEVDGAVVTTEG
FGNNHIDFASHIEQIGMRGIPVVGVSFSAVQGALVVGNKYMTHMVDNNKSKQGIENEILSNNTLAPEDAV
RIMAMLKNAIEGVEVKAPERKWNPNVKLNNIEAIEKVTGEKIVLEENEQSLPMSKKRREIYEKDEN
>gi|260688445|ref|YP_003219579.1| sigma-54-dependent transcriptional activator [Clostridium difficile R20291]
MRYYYKGGDFMFSIPEVKKVEEVMDTKFTTIDEDTRIEDAIKEMIKSNTKTLMVIDSSDQLKGIISMTDI
HNLYEMHKKYEGQPVKLIMKKDVIYVNEGLTLDECRDIMILKNIGILPVLRDNKIIGVLKQEHIRDYLYM
HLEDYGLTLKYIIGQIKEGICAINNEGVVILWNKFMEERYDIKSEDIVGRPMNEFLENTISEKVLNSKVG
MSDLYFTDKKENMYALVHANPIFYKEEFIGVVCTEVDVTEAKILALELEKVNDTLKYLKNEVKNLSKGSF
DKILGKSYKLEKSKAIAKQVARTNSSIFIWGESGTGKEVFARAIHDYSERKGQFIPVNCSAIPNELFESE
FFGYESGAFTGASKKGRIGIFELAKDGTVFLDEIADLPLSMQAKLLRVLQEKEIRRVGGDTTIKINPRII
SATNKDLSKMVKAEKFREDLYYRLNVVEIKIPPLRERKEDIGLLVHSFLEEICKQNNKPVLTISKDVIDI
FQNYRWKGNIRELKNTIENIVVLSQNSKIDVDDVPSYMMDSTNNSTEEEEYPLDLTKATQKIEIKNITKA
LKMSNGNKAKAAKILNIPRTTLYYKIDQYKIDVSKI
>gi|260688446|ref|YP_003219580.1| putative electron transfer protein [Clostridium difficile R20291]
MNKLYSILLKQHVGGPDKPVVSVGDVVKKGTLIAEPTGLGANIYASVSGKISEINDQAIVIEADEVQEDT
FEPLKGEGILDLIKEAGVVGMGGAGFPTHVKLNIDLNGGTILANAAECEPLLAHNIKEIEERPEIVYQGI
KYAMEVTNAGKGMLAIKSKHPKAIEAFKKVIKPGDNIEVAELVDMYPMGEERAIVRDVLGKLLEPTQLPS
EANAVVINVETLTRIVEAVEQKRPVISKNITVVGQLNSGKESIVFEDVPIGTTVGELIERAGGIKGEYGE
IILGGPFTGKATTLDAPITKTSGGIIVTMPFVNEKRKMGLLVCACGPNEERMRDIATKMGVTDIVSVQKC
KQAQEIKGALKCENPGHCPGQAQKCIEFKKAGAEVILIGNCTDCSNTVMGSAPKLKLGVYHITDHVMRTV
NHPLIRRIKGDVRLKIK
>gi|260688447|ref|YP_003219581.1| putative polysaccharide deacetylase [Clostridium difficile R20291]
MKREVKRTKALIYSVLFFSLLLVLIFVFVYGIKYICSKYDNSKMPIYKVDTNEKKIALSFDVAWGTDNMD
DILKILDKHNVKATFFLVGSWVDDNEEIVKAIDEKGHEIGNHSNTHANLKEISKEDITKEIETTSEKIYN
ITGKKTNLFRPPFGDVNNKAMDICSDLGYKVIKWDVDSIDWKELGPNHVIEKVIKESQPGSIVLFHANIN
DVDNYLDTIISRLKKDGYSLVKISDLLYKDNYVVDSNGVQKTKN
>gi|260688448|ref|YP_003219582.1| small acid-soluble spore protein B [Clostridium difficile R20291]
MRRKFTMSNSNRTVVPEAKAALNQMKLEIANEIGLSNYENIDKGNLTARENGYVGGYMTKKLVEMAERQM
AGK
>gi|260688449|ref|YP_003219583.1| hypothetical protein CDR20291_3108 [Clostridium difficile R20291]
MIFMFENSSEELAYHKLLILYILEKIKMDLTNSQITQVVLETEMMNYFSLQQLLSQLMESKFLTTYKDSD
REYYALTQRGVESLEYFFNRIPTSVTEKIDKYIDSNKENLLADTQVKSSFVKQSDNEFIVNLRVIENQSN
LIDLNLNVSSEKQAKLICNNWKNNASYMYAEVIDLLIRDIH
>gi|260688450|ref|YP_003219584.1| hypothetical protein CDR20291_3109 [Clostridium difficile R20291]
MKIYISNYLSKSISIVDYSTLELEKEIVLEDNIYPHHFCIEKEKNLIYIPSSSNGILYVLDLSNDKIIDT
VSIGGSLSQVVLSDNELFVANEDSNSIYVLDKNTLNPIGIIGVDNMPHGFDFDRESKKLYVPCINSIVCI
DTINKNIQKKINMDFRAWHIELDKQKKEMYISTLDGKLIIIDEVSMDIKKVLYEFLLPVEIRFNYSGKKV
YVADLGYNNVRILDYTTSRYIGNIEINGIPQGLEISKDEKLLFVSDTQENSVKVYETANNKLIKEIKVGK
EPTTIICL
>gi|260688451|ref|YP_003219585.1| hypothetical protein CDR20291_3110 [Clostridium difficile R20291]
MKVTFNPSGVCCREMIFEVDENNVIVDAEFIGGCNGNLSGLRSLIIGQNALEVADKLNGIDCGGKGTSCP
DQLSKAIRQSI
>gi|260688452|ref|YP_003219586.1| putative folylpolyglutamate synthase [Clostridium difficile R20291]
MKYEEALEYISQTNKFGIRLGLENIGKLLELLGNPQETLNIIHVAGTNGKGSVCSFVSNILRECGYKVGL
YTSPYLETFTERIRVNGQNIPQDDVARIIELIKEKIEIMVKEGYAYPTEFEVVTAMAFYYYSEQKVDFVA
LEVGLGGRYDATNIITKSLVSVIVSISLDHTGILGDTIEKIAYEKAGIIKENGVVLVYDQTDEAKDVIKS
VCKEKKAKYIEVDFDDINIKKSDINSQIYDCTVMKETYRDLEIKLIGEHQINNSILAISVIKYLKDINKL
ANINEESIRKGLINTKWPGRIEKIKENPIFIIDGAHNEDGAKSLAKALDKNFKGRKLTLLIGMLEDKDID
SVLEILLPHFNKVITTTPNNPRAINSDILREKVLKYVDDVTSKHEIEDAVNYTLETSSEDDIIISAGSLY
MIGTVRTLVKKL
>gi|260688453|ref|YP_003219587.1| putative serine protease [Clostridium difficile R20291]
MENICDMNNKVKVAVLDTGIDKEHDYLKDNLVGGIAFECMHDYIFISDKFDDEDGHGTACASIIKKEYED
VELFVIKILRKDGITNIKVLEEALRYLLDTNIRLINLSLSVIGVESVKGLFEVCYELFRKGKIIVCSLAN
DFDLSYPAMFNNVIGVRGFTLDGDDSFWYNKKYDVQCVMDSNSYISCDINNSYRLPPKCNSYLSAKLTGK
IAKILSEKPGITISDLNDKLESLATRNHWDSCDFDECSRIVNFKLDLYDKENALLMKVADVVRDCLDIED
NNEKLFKGSLFNKEIGLVYDNCFNLLKKLEHRFDIKFNYMDISKYDLVSIYTLTELVERYKNL
>gi|260688454|ref|YP_003219588.1| two-component response regulator [Clostridium difficile R20291]
MFRVVICDDEKIQRSILKEFTKKLLSERCLNYQILEFSCGEDLISKYPEKIDIIFLDIQMKDINGIEVAK
KIRKFDEKVEIIFTTAFSEYAPQGYEVRAYRYLVKPIEYSNFAMGVNLCIDNLQRKKERYIVLNSKKGFN
RILIDSILYVETVKRDLVVHTIGRDYKANMSMKQAEKLLCENGFFRCHTSFIVNLRRIEDLRDNMITINE
QFIPISKYRLKDLKVALTSLLCDIMY
>gi|260688455|ref|YP_003219589.1| valyl-tRNA synthetase [Clostridium difficile R20291]
MENTNLSKTYNPKDFEARLYKKWMDEGYFKSKPNPDKKPFTIMMPPPNITGQLHMGHALDHTLQDILIRW
KRMDGYEAFWLPGTDHASIATEVKVVERIKKQEGKTKYEIGREEFLKRAWEWKDEFGGKISNQLKQLGDS
CDWDKERFTMDEGCNEAVIEFFVSLYEKGHIYRGNRIINWCPDCKTTLSDAEVEHEEHDGNFYHIKYPLK
DSEDFLEIATTRPETMIGDTGIAVNPEDDRYKHLIGKTAILPLVGRELPIVADSYVDLEFGTGAVKMTPA
HDPNDFEVGLRHNLEQLNTMNEDGTMNEVCGKYEGMDRFECRKAIVADLKEQGYLIKIKAHNHNVGTCYR
CHTVVEPRLSEQWFVKMEELAKPAIDILKKGELEFVPDKFDKTYLQWLENIRDWCISRQLWWGHQIPAYY
CQECGEIVVARKMPDKCPKCGSTHFKQDEDALDTWFSSALWPFSTLGWPNKTEALDYYYPTSVLVTGYDI
IFFWVVRMAFAGMFCMNEKPFDHVLVHGLVRDSQGRKMSKSLGNGIDPLEIIEQYGADALRFTLTTGNSP
GNDMRFYMERVEFARNFANKLWNASRFVFMNIDEDIIKNMTRESVKEDLTLADKWIISRANNIVKEATNN
MDKFDLGIALQKIYDFTWSEYCDWYIEMVKPRLYGEDANAKSAALYTLTYVLEKILKLLHPYMPFITEEI
YTHLPTVEGCIIVSEWPKYNEEDNMAEEEDMMNLLMEGIRSIRNVRAEMNVPPSKKAKLIIIPSEEKIEA
IELGKDYFITLASASNVEIAKDKSNVPEDAVGVVIDGVEIFIPLNELVDFEKEIERLSKEKKKLEGEIKR
VNGKLANQGFLAKAPESLIEEEKVKKEKFEEMIKSVEERLTNLESKIK
>gi|260688456|ref|YP_003219590.1| putative polysaccharide deacetylase [Clostridium difficile R20291]
MKIKDNKAVFHVFIRIFLIAVLILTGTLLEEKINNVPVENISSKGENTLELLSQSNTLGEIIYKASQEET
KGPGATSEKVAYITIDDGPSKYTNALLDILKENDVKATFFMLNQNMKNHKEEVRRVLEEENSIGFHSVSH
DIHKLYKSPEVTVGEFNTCNNTLQEITGQSSKLIRLPYGSKPYMPEGSYNKLMANDYLIWDWNLDTQDWK
SSTSQIVSNILYYGRKRDELVVLIHEKEQSLNALNNIIRILKERGYTILPITENITPKNFWQENL
>gi|260688457|ref|YP_003219591.1| iron-only hydrogenase [Clostridium difficile R20291]
MEVLFFMNTRNDNSKILEIYKMKLFGELVKAVWNDDIEDIENLPNKILNEDLKDNLNNYFSGKFDKDTMV
NLIRVTMGLDVTEDTDKNLKESLHEAVNLDEVKRPIISVISDACKYCDENNKEDESCKIRSKHINCNEED
VCSACGDCVSRCKLGAISDKIEFIPMIKLLKDIKSPVYAIVAPAFVGQFGKDVSPGKLRTALKKIGFEDM
IEVALAADMLTAKEAYDYYEHMKKDEEGCFITSCCCPIWVSLIQNSFPQILENVSPSVSPMIACGRAVKI
LNPDAKVVFIGPCMAKKKEAMLEDIKDAVDFVLTFKELQEIFDALELNPAIMDESNRVEASLSGRVYART
GGVSKAVKLSVRRIDKNIKFEEKAFEGTKECMDGLKKVLNKEIEATFIEGMGCVGGCVGGPKRILSVEEG
TKNVDEYSESTNMETPFDNLNVLQFLTSLGIKRVESLGEKEEEKVKKIFSRDIKSNKKENKYKK
>gi|260688458|ref|YP_003219592.1| hypothetical protein CDR20291_3117 [Clostridium difficile R20291]
MGMRTIKTGISVTLCMILGNYLVENMFYSLVACIISVQDTVKGSLKTGINRVEGTILGGIIGFIFAIIKA
GDPFLCGLGVMCSIYLCNLFKIKSVVVACVTFLAIHLGVGNSDPVYYSLHRVLDTSVGVLFGVLVNYYVA
RPNYLNSVIDEFKKIEELSMLLIEDKILRKENLNVEKFEEEVEKLEEIYSKLIDELDYSLSETNIEKIEN
ALRICREIHFHMQSIELLENKLYLKEHTYKYLKKTYNVDKLDWNIDEEKSPVFNYHLMKIMIEIELLRKL
NKSY
>gi|260688459|ref|YP_003219593.1| putative phosphate transport system protein [Clostridium difficile R20291]
MVNNSLDISIDTLKEQTVLMMEKCEEAIEKSVTCMIEKDLEGARKVVEDDEEINKLREEIRDKSIELIVL
KQPMARDLRFIYSLGNISIELERIGDYAANIAREMLKIGGEAYIKELIDIPKMAKECKSMMSQTREALIL
FDASIAYDVGTKDDIVDGLYEQVQIDCLKIMHENSNTIDQGVKLLLIGRYLERIGDHITNVCEKIIFAIE
GKMVEIG
>gi|260688460|ref|YP_003219594.1| phosphate import ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MELIDKIKMSVKDLDLFYGDKQALKKINMDIKENKVTALIGPSGCGKSTFIRTLNRMNDLIEDVTIKGNI
SVDGEDIYTSDDVINLRTKVGMVFQKPNPFPMSIYDNVAYGPRTHGLRDKKQLDKIVEESLKGAAIWDEV
KDRLKSSALGLSGGQQQRICIARAIAMRPEVILMDEPTSALDPISTLKVEELIEDLKKDYTIVIVTHNMQ
QAARISDETAFFLNGEVIEFSDTKTMFTTPVDKRTEDYITGRFG
>gi|260688461|ref|YP_003219595.1| putative phosphateABC transporter, permease protein [Clostridium difficile R20291]
MRKFKENLLKSLVYLSALFTIVSLVIIVGFIFIKGIGNMNFNFLFSNYSASGDGGILPMIITTLYTVVVS
IVVATPIGILAAIYLQEYAKKGKAVTAIRFATESLSGIPSIVYGLFGGIFFVVTLKMGYSIVAGSLTVAI
IILPVIIRTTEEALKTVPQAYRESSLALGATKFQTLYKVVLPSAIPGILSGVILSVGRIIGESAAILLTA
GTVAKMPGGIFDSARTLTVHSYLLTKESGDIATAASIGIVLIVIVLALNMLARFVAKKLNKANY
>gi|260688462|ref|YP_003219596.1| putative phosphate ABC transporter, permease protein [Clostridium difficile R20291]
MIVKSRLVGLEKNDNNGNKTKYVIEKVAKNIFLLSALVAVASLLLIIGFVFYKGLRPFIFEGYSFIDFLT
GADWVPSANKFGISSMIVASIFATLGALVIGVPVGILTSVFIAEVAPKRLAKIMSPAVELLAGIPSVLYG
VFGLAVIVPTIQSIFNLPKGQSLLAIVIVLAVMMLPTIISVSETAIRAVPKAYKEGSLALGASKIETIFK
VVLPAAKSGVLAAVVLGVGRALGETMAVILVAGNSPVMPTAITDSVRPLTTNIALEMGYAFGTHQEMLFA
TGVVLFTFILILNLVLNKLSNKAVN
>gi|260688463|ref|YP_003219597.1| hypothetical protein CDR20291_3122 [Clostridium difficile R20291]
MKIERQTSSAQMKAQELYRKVDTPFEIYPGYSKDAFDYIIFYIFILLIICVAITAPTFSGEYQTQSDSIL
RCTKHGHTRLAFTKILALFSIFIVMFVVCISIHLAISDLAFGTECLKTSFQMLFSVISLVNINLLQAQIL
IAIGGLISILAMVSLTLFLSAKCKDSLTSMLIAFSICLIPMGIGVSWIGYLLPPGGIGLKISLLYQMTSF
NFLHLGGMSFWTPHIILFFSVIEIPIFIFLAIRTYCKHQVS
>gi|260688464|ref|YP_003219598.1| ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MELKIEHVTKKFKDKIAVEDVCLTLTPGVWGFLGANGAGKTTLMRIITDIMKPTNGKILYNGKNIYIMGA
EYRNLLGFLPQEFGFPQDFSVKDYLEYIAALKDVPPREVKGKINNLLEILTLSDVKNKKIIKLSGGMKRR
VGIAQAMLNDPKILIMDEPTAGLDPGERVRFRNFISEFSHNRVVLISTHIVSDIEYISTQNAIMKSGKIL
DVGTTDKLVKKVEGKVWECLISNRDISKYEMNLRIINQRSEKNNQVSIRYLAEKSQIDNSIAVEPRLEDL
YLWLFPEAVYSKEGK
>gi|260688465|ref|YP_003219599.1| sensor protein [Clostridium difficile R20291]
MGCWLQDLTPIFLVKKGCSIMKKINNFTYRKLRDKYKFIKREKNTEAYLKYKLYIMLAIYTGIVLVLMFM
ADYTFSNFSNPLVKWLKLRRDVLFFLVFIIGYITIFNFYWKKPWNYLREIINATHTIYQQNDELVELSKP
LKEIEQQMNQIKMSVLLSQQAVKEAENKKNNLVMYLAHDIRTPLTSVIGYLSLLKEIPNMDNSQKSKYTE
VALDKAQYLEKLINELFEITRYNSNQIKINFEKVDLYYMLLQLKDEFYPLLSEKGNRAILKANESLTIKA
DSEKLARVFNNILKNAIAYSYPNTEIIISAVHKDSKVDIAFRNYGQTIPEEQLSAIFEKFNRLDEARKSD
MGGAGLGLSIAKEIINLHGGDITVQSKDEVTTFTISLPTSI
>gi|260688466|ref|YP_003219600.1| hypothetical protein CDR20291_3125 [Clostridium difficile R20291]
MSGKILVVDDERDIADLIEVYLTNENYIVYKFYSGLDALNCINLNEFDLAILDVMLPGVNGFSLCQKIRE
KYTYPIIMLTAKDEETDKITGLTLGADDYVTKPFRPLELVARVKAQIRRYKKYSGSLQSGEELSHIFSFL
GLELNTQTYECHLNGKALSLTPTEFSILHVLLKNKGSVVNSENLFHAIWKDEYYNKSNNTITVHIRHLRE
KLGDTVDEAKYIKTIWGVGYKI
>gi|260688467|ref|YP_003219601.1| two-component response regulator [Clostridium difficile R20291]
MQTKILIIDGDKDNCQKLKGFLEEKEISIDLAYNCEEAIGKIFSNKYDLIFLEIILTDGDGWTLCKKIRN
VTTCPIVYMTYINEEQSILNALNSGGDDYLIKPLNLEILYAKVKAILRRMNSYVNNNENNTKLEEYNRTS
GVIKLEDKIIKLTPTENKLLNFFIENPEKTLTTKEIYEHVWMNEYLEDNYSVVVAVNGLRKKIEKDYKNP
QKIITIRGAGYYFNKE
>gi|260688468|ref|YP_003219602.1| two-component sensor histidine kinase [Clostridium difficile R20291]
MKKYNILKGTLIVLIVSLLAIAGLNLLYKYDNKYTYKSIRASNGILTIDNDTFTKGKLVFLIDDWEFYNH
KIFKPNDFTEQDIKPEYVFIGQYPDFSMRKGNQSPYGNATYRMRIKNEGEDKLLSLELPEIFSASEVWIN
GEIVSKLGDVGTEKYRPKIKNSVVSFIAKKDTEIIINVSNFSHYYSGLYYPPALGETKDISNMMFYRLLF
YSIICFTTFAIAIFSLSVWFLSNKSKLYLYFGCMCVFFAIHVSYPFVHLLGLPLVSFTYAVEDSSYFMVV
LCIICINGSISKIEEDKVYRFLILPLGITMSIISIVIPIILLPYDMYFVNIYGKLIDIYKYIVFIYILMS
SLVSIYKKTCSEHISSYILVSVNTVFGISILFDAVTSNRFEPIFTGWQTEYCGFIIVILFSLMMINRNRI
IIKENEKLTRNLEHEVEVRTNELTTLLNERKKFLADVAHDLKAPVSAIQSFIDLIKVGNIHVDEETRTYL
YAINQKSNEVQNRVRSLQEFTSQDKSIGISEKICLNDFIKEIYENNLPDTQACGVNFETYILEKKIYAKI
NKEMLTRAFENLIYNALTFTPFDGKIILSMDKEDGFAIIKVSDNGKGIPPENIPKVFDRFFTERDNNEPK
GQGLGLYIVKSIIREHGGEIFVDSELGKGTVFTIKLSLCFL
>gi|260688469|ref|YP_003219603.1| two-component response regulator [Clostridium difficile R20291]
MYNLLVVDDDVDILNINQIYFSNIGFNVYTSETAKDAMDIVERIVLDCIILDISLPDIDGYKMCNDIKEK
VNIPIIFLSNYEHEEEKVRGFLAGGDDYITKPYSLKELELRIYARMRQYKNITSVPNVLKFSALVINVNS
RKVTFDGESIDLTTMEFEILLFLAENKEQVFSKIEIYNQVWKMPDIGDQHTVQVHIAQMRKKINSLSREH
QYIQTVWGKGYKFVP
>gi|260688470|ref|YP_003219604.1| putative phosphate ABC transporter, substrate-binding protein [Clostridium difficile R20291]
MFKKKIGVLLASTMLVGALAVGCSSNSGGSGDSGDSSKVSVSGSTSIGPLMETIGEKFQEKNQGVSVEVQ
QIGSSGGIKNAIEGTSEIGMSSRDLKDEEKSAGLKETKIAIDGIALITNTANSVKNLTMDQVKGIYTGKI
TNWKEVGGNDAPIVIVSREEGSGTRDGFQEIVGFDSEELTKDAQISDGSGNIKTTVEGNENAIGYISFGY
VDEKVNSLKINDVEATDANVMANKYPISRPFILVNKEDGLSEKGKALIDYILSDEGQALVSEKGFIKVNQ
>gi|260688471|ref|YP_003219605.1| putative endopeptidase [Clostridium difficile R20291]
MGTDRSTIEEKYKWKIDKMYSSKEEIEKDISKVKNLIQEVKEYKGKLSESKENLYKVLNISENASRIVQN
LYVYTHMKQHEDTRINDNQGRATKTEMLSTDLGVATSYIVPEILAIEENKLSEYLKDEKLSFYTKYIKDI
LRDKPHTLSEREEEILAATSELSTIPENVYDMLAYADMEFPEIEDEEGNKVKLSHSNYSLFIKSKNSRVR
KDAFEGEFSTYEKYKNTFASTLYGGIKSEIFYAKTRKYNSAIEASLFSDDVSLDVYNNLISAIDKSIPNL
NKYVELKKKFLGLNEIHMYDLYVPLTDKFDMDIPYDKAQDIILEALKPLGEKYLKVIKSAFDEGWIDVYD
NEGKKGGAYSWGSYDSHPYILMSYKNDLNSLFTLIHELGHSVHSHYSRTSQPFLYSDYKIFVAEVASTLN
ELLLINYLLENSKSKDETIYLLNYYLEQFRTTVHRQTMFAEFEKIVHQRVESGEPLTADEFTNIYYKLNE
KYYGKSAIVDKQIGIEWARIPHFYSNFYVYKYATGFSAASALSQQILSEGSTAVDRYINFLKSGGSEYPL
EQLKSAGVDMTKKESIEEALNVFAELVNKLEKEL
>gi|260688472|ref|YP_003219606.1| putative cation transporter [Clostridium difficile R20291]
MIDIGSKEIAIRLLLALIIGGIIGLEREKIRQFAGFRTHILIAIGSCIVSITSIQLFFDYNLYTNADPAR
MPAQVLSGIGFLGAGAILKNKGGVKGLTTAAGMWATACIGIAVGYGYYELAILGGLFVMIALFVLRIINT
FLFSQEKNVLILKLSNLDSIPFLYDKFEKNQLIVRNMEIECRNEEYWKVNFFVSYAKRIHLHDVMKEINM
IEGVINVDYLD
>gi|260688473|ref|YP_003219607.1| hypothetical protein CDR20291_3132 [Clostridium difficile R20291]
MFDKMYIKIYKFVIVVIIMANNELEALKNEIEAVREEINTYIEYPEIFQEELVESSKKIDILINKYMYLS
K
>gi|260688474|ref|YP_003219608.1| hypothetical protein CDR20291_3133 [Clostridium difficile R20291]
MKTRKMTFLGLMIGYSLALYVLETYIPNPLIVIFPGAKLGLSNIITLISLMLLGVKDTVIIVTIRVILSS
IFAGPLSYLLFSIGGAYLSLLFMYLASKIKDLSLIGISIIGAIGHNIGQLIVASLIIENILAIGYLPFML
MASLVTGMFVGLVSRYTIPKLKHFYSKFY
>gi|260688475|ref|YP_003219609.1| putative ferrous iron transport protein A [Clostridium difficile R20291]
MTVYDLKIGEKGFINSIDGDIKLSKRLLALGCINSTEIEVKKVAPLGDPIIIRFRGFDLAIRKSDAKNIS
LQ
>gi|260688476|ref|YP_003219610.1| putative ferrous iron transport protein B [Clostridium difficile R20291]
MINVALLGNPNVGKTTVFNLLTGSNQYVGNWPGVTIEKKEGFLGKEIKVVDLPGIYAMDTFSNEEKVSKS
YLENEDVDVIVNVVDASNLSRNLYLTTQLMQFNKPIVILLNMLDIAESKGVNIDAKKLSEELGVIVVPII
AKKKNGVDRIEEEIKGATQKAFIYQKNFGSETETYKKLESILSRCTKTTYTQKKSISDKIDNIVLNPILA
YPIFIGVLFLLFKFTFDWVGGPLQEGFASLIEAYISAPVSDMLSNSSPWFKSLIVDGIIGGVGGTLPFFP
LIFTLFFGISLFEDSGYMSRTAFLMDKVMRKVGLSGKAFIPIVMGMGCSSPAIMATRTLESEKDRRVTAL
IAPLMTCGAKLPIYALFVAIFFPHNAALVTTSLYLVGIVMAIVVALFLNKTAFKTEAEPFILELPEYRIP
TIDALIKNTWNKSKGFLIRVVTVMFAMSVVIWGLSSFNVFGYTEDINVSFLATLGHIISPIFKPLGFDDW
RTSVAILSGLGAKEIVVNSLNILYGNLTVVLPTIFNGVTAYTFLIFTALYTPCIAALATMKKEYGNKMMF
TSFAYQFILAWIMAFIVKSIGGVLFMGNSIMEALIGGIIIVLALFILFNKFKSTKNGNVCSGCSICSGCP
SANSCSSKEDSNKKSNTH
>gi|260688477|ref|YP_003219611.1| putative phosphosugar isomerase [Clostridium difficile R20291]
MTIQDYMLETPVRMREIISNADSLFNEVKRANLKKIIITGSGTSYHSGVQVQPYLQNLLDIDVVKMYPFM
ITEDTFKFDNENTLVVGVSQGGSSYSTYNAMKLAEDKGCKIASMAGCKNALIDEISDYILTVNCGEEKSG
AKTKGYYCTKLNLMLLGLQIAREKGTISSEKYNEEINKILDAINRFEAVYKLSKQWIERNKEKLVNSKEI
RIIGHSDIYGDTLEAALKLLETMRIPVTGYEFEEFIHGIYNAINSDSTIFILDTGKEPRVTKMIDVLSGW
TENVFAIGRDVTENDKNLKIDITDNPYYQTFNFIVPIQLICGEIPTLRGVDPSVPKDTRFHMKLGSKKLN
K
>gi|260688478|ref|YP_003219612.1| PTS system, IId component [Clostridium difficile R20291]
MFWRSFALQGAFNYERMQNLGYCYSMLPAIKKLYNKKENQAKAIERHLEIFNTTTVVVPAILGITAAMEE
ENANNPEFDESSISAVKTALMGPLAGIGDSLFWGTFRIIAAGVGVSLAKEGNIFGPLLFLLLYNIPAFAL
RIFGLKYGYKVGVNSLERIQREGLMEKIMSMATTVGLFVVGGMVATMLSITTPLKFNLNGAEVILQDILD
KIIPNMLPLTFAFLIYYMLKRKVSVTKLTIGTIVTGIALHAIGLL
>gi|260688479|ref|YP_003219613.1| PTS system, IIc component [Clostridium difficile R20291]
MLVQATMLAIIAGVGILDGRIFGQSMFDRPIVTGMLVGLVLGDIKSGIMIGAQLELIWMGIAGIGAATPP
DVVTGGVLGTAFAILSGNGAEVALAVAVPVAVLAQSLGVLVRIINSYFSQKAVFYAKQADFKKVTIMMWL
PVILFFLSTSVPTFLAIMIGADKVTTLINAIPKVILDGLGVAGTLLPAVGFALLMDMLISKKMSVFFFIG
FLLASYGGLDITAIALFGVCVAFVLNFYINNKENNQNPQLAMNTLTEGEIDFE
>gi|260688480|ref|YP_003219614.1| PTS system, IIa component [Clostridium difficile R20291]
MKKFLIATHGELSRELVDTSKLIIGSLANIEYFCMTKDKSADDAEKEIRSILSNNKDSEEFVVLTDVFGG
SVANICTNLLLQGFKFELLTGVNLPMLLSIFLLVEEDTKLIVKSGLEEAKNGIVYVNELLENRNKIKNVM
>gi|260688481|ref|YP_003219615.1| PTS system, IIb component [Clostridium difficile R20291]
MVSLMRIDDRLIHGQVAYGWATSLGINVILVANDEAKNDQMKAMSLNLAKPSNVTLYIRGVEESGEIVEK
FASSKKSNVLVLVKNTRDALVVAKNSGGVLKEINVGGLRYEEGKKKLTDLVAVDDDDINNFKEIGDLGID
IELRMLPRDKKKQLSDLIK
>gi|260688482|ref|YP_003219616.1| putative transcription antiterminator [Clostridium difficile R20291]
MRDEILSFVNECVLFNNFDELKKESGIITEDIVKKFNLSRTQSSRLLNDLVKSDNLIKINSRPVIFLPKN
KINDVVGPTKKSIYENLDELKNECKLLKQETVFNSIIGYDNSLKEVIEQIKTAVLYPNGGLTIMLTGESG
VGKTFLAKIIYKYSVSSNVLEKNSPYNVLNCAQYYNNLELLSSLLFGHVKGAYTGANESRAGLIEQSDGG
VLFLDEVHRLNSEGQEKLFTFMDTGTFSRIGENGVIRKARVRLIFATTESLSKFLQTFLRRIPINIYVPN
IEERGTIEKRKIVEHFIYEESKVLGLPIEITQITLNTILKIKFKGNIGECKNVIKYACGRAYAKNQRRNG
NIFVTLQDLPRNLYIENVDIFQFQSGKSKSIIFSPKQFSIEMSNGRNKRNIIYQSFIKCLDYFDRLEKNE
ITKEIFSKKSSNLMIRLMDNLVFSNNDENNNVLMELIISIMQDIFRNLEVNNNIKYDGNNVLAFSSYLYL
KDESYQLSDEYKALESKLLIYLKKESYKEYSIISKISTLITNRLDMYLNNVDTIIMIIFIKSTIIRMKFN
QVNATIIAHGYATASSMANVCNRMLGKNIFTAIDMPIDATIADVSKQMSRYLEGDRIKNGLIVLFDMGSL
NLIYEDLKNKINGPMLFIDQISTISALEVGNLLMQGKNIEQIAEIMDEETKPNIQLYYPQKNKEYAIISS
CFTGIGTAIKIQHLLSESLIGIVDVKIIPYDYDSLVSMGDKEPVFEMYDVMAIVGTANPNVNGVDFILLE
DIISGKGEDDVFRIFSRVVENEKIKNINDSIVKNFSLIRVIDSLTILDSKKIIERIEEGINAIENIQKKK
LPNDKKISLYVHLSCMIERLVRQTEIEEYTDMDLLIKNHHSEVKLIKNAFSVLEKSYSVQIPISEIGYIY
NIIYGLPQ
>gi|260688483|ref|YP_003219617.1| pyrroline-5-carboxylate reductase [Clostridium difficile R20291]
MKTLGFIGSGNMGSAMIGGIVQSGLVKAEDITVSDLSQVALDKVKEEFGINTTTDSKVAVTNSDVVIVAL
KPNICEKALTPLKELIDANKIIVSIAAGKTIESLESFIGSDKKIVRVMPNTPALVGEGMSALCKNSNVTD
EELNMIKALFESFGEAEIVSEYLMDTVTGISGSSPAYVFMFIEAMADAAVLAGMPRQQAYKFASQAVMGS
AKMVLETGKHPGELKDMVCSPAGTTIEAVKVLEEEGFRAAVIKSIVACIDKSKDMSK
>gi|260688484|ref|YP_003219618.1| putative formate acetyltransferase [Clostridium difficile R20291]
MARGTFERTKKLREESINAEPHISIERAVLMTEAYKKYEGSVEIPVLRALSFKHYIENRTLSINDGELIV
GEKGDSPNGAPTYPEICCHTMEDLEVMHNRDIINFSVSEEARKIHKEEIIPFWKKRQTRDKIINAMTPEW
LAAYEAGMFTEFMEQRAPGHTVCGDTIYKKGFLDLKKDIEARLKELDFLNDLDAYNKKADLEAMAIACDA
MVILGKRYAEKARQMAEEETDEAKKKDLLLIAETCDVVPAHKPETYHQAIQMYWFVHIGVTTELNIWDAF
TPGRLDQHLNPFYERDVENGILDRDRAQELLECLWVKFNNQPAPPKVGITLKESSTYTDFANINTGGINP
DGQDGVNEVSYIILDVMDEMKLIQPSSNVQISKKTPQKFLKRACEISRKGWGQPAFYNTEAIVQELMEAG
KTIEDARLGGTSGCVETGCFGKEAYVLTGYMNIPKILELTLNNGYDPISKKQIGIETGDPRNFQSYEELF
EAFKKQLHYMIDIKIEGNAVIENICAKHMPCPLMSTIVDDCIEKGKDYQRGGARYNTRYIQGVGIGTITD
SLTAIKYNVFDKKKFDMDTLLKALDANFEGYEAILNLVSNKTPKYGNDDDYADEIMQEIFNAYYNEVTGR
LTVCGGEYRVDMLPTTCHIYFGEIMGASPNGRLCAKPVSEGISPEKGGDTNGPTAVIKSCAKMDHIKTGG
TLLNQRFAPSVVQGEKGLDNMANLVRAYFNMDGHHIQFNVFDKNVLLEAQKNPKDYKDLIVRVAGYSDHF
NNLSRTLQDEIIGRTEQTF
>gi|260688485|ref|YP_003219619.1| putative pyruvate formate-lyase 3 activating enzyme [Clostridium difficile R20291]
MNPLVINLQKCSIHDGPGIRSTVFFKGCPLECVWCHNPESQTYTKQVLYNEERCSKCEACINICPHKAIY
KGETKICLDQDKCEFCETCLDYCVNNAREIVGQEYSVRDLVKEIEKDRIFYEESGGGVTLSGGEVMAQDM
DFICGVINMCKSKGIHVAIDTCGYAKSENYERVAKCADLFLYDIKLIDEDKHIKFTGKSNDLILKNVKIL
SELGVNINIRIPLIVGVNVDDENLEVKKMIEFLKPLNIQAVSLLPYHNIGKHKYDKIYKKYEGEELQRPS
EEKLEEIKRLFEASNFNTKIGG
>gi|260688486|ref|YP_003219620.1| putative protease [Clostridium difficile R20291]
MSRRKKGISLVILVAIISSILSSFLTIILVKDNLVSKSTGSSTPIVVNDDGKSQNIYQAVAEKATPSVVG
ITTTSVDTSNMFAIPTETQGVGTGIIVDSNGYILTNSHVISDGQATSVNVLFNDGSTTSGKVVWFDQQLD
LAIVKVDKTGLTPAEFADSDKVKVGDISIAIGNPLGLDFQKTVTQGIISGLDRTIQTEKTNMTGLLQTDA
SINAGNSGGPLLNQKGQVIGINTAKASQAEGLGFAIPINTAKSIVEEVIKNGKYEKVTLGIKGTDVSNYE
AATGTKLSTDKGVYVAEVISGSSAEKAGVKVGDIITKVGDTDITGMNDLNKKLYTFSKGASTKITVNRGG
KAVTINVNF
>gi|260688487|ref|YP_003219621.1| glucose-6-phosphate isomerase [Clostridium difficile R20291]
MGKINFDYSKATEFFCQNEIDVMQPYVDVAHDMLHNKTGLGNTFLGWIDLPKNYDKEEFDRIKKSAEKIK
SDSDVLLVIGIGGSYLGSRAAIDMVSHSFRNGLKKEQRKAPEVYFVGHNISSTYIMDLLDIIEGKDISVN
VISKSGTTTEPALAFRIFKDYLEKKYGKEEARKRIYATTDASKGALRQLATEEGYETFVIPDDVGGRFSV
LTAVGLLPIAAAGLDIDAMMKGANDAREAFQNPDLKSNDSYRYAVARTILHRKGKDVELLVNYEPQLHYV
SEWWKQLYGESEGKENKGLFPASVDFSTDLHSMGQYIQDGKRLLFETVLNVENCKRNITISSEEVDLDGL
NYLAGKTVDFVNHKAFEGTLLAHTDGKVPNLVINIPQLDEYNFGYLVYFFEKACGISGYLLGVNPFDQPG
VEAYKKNMFALLGKPGYEKEKEELEKRLK
>gi|260688488|ref|YP_003219622.1| putative sodium-dependent phosphate transporter [Clostridium difficile R20291]
MGGLGLFLYGMNLMGEGLQKSAGTKLKKIIKLLTSNLFMGVLVGTGVTAVIQSSSATTVMVVGFVNAGIM
TLKQAIGVIMGANIGTTVTAQLVSFDLTGMAPVALGVGIILYLFGNKPRIKNIAEILIGFGILFTGMDFM
KMAVEPLRDYQGFTDLLVTFGRYPLLGLLLGFGITAIIQSSSASMGMLVALAAEGLVPLSAALPILYGQN
IGTCVTSLLSSIGANKNARRAAMMHLIFNVLGTVIFLIFLNKPVVSMVTSWDPSNVARQIANTHTLFNII
SVLILLPFTNLIIKLAIKLVPDRAGDIDEDETKTIKYIDDRMIETPSIALANTIKEALRMGEKAKESLNA
SMEALVEHSTEKIAKTYRRERLINDLQKAILNYLLKLSKAPLDDDSREVVDTLFNTVNDIERIGDHAKNI
AELSQVAIDSNISFSEEGQSELDVMYNRVVSAYTYALESMRTDNVDLACKVIKIEEQVDIMEKSCRANHM
YRLNNNLCSIENGVIYLDVISNLERISDHAVNIAQQVIAKRLGND
>gi|260688489|ref|YP_003219623.1| hypothetical protein CDR20291_3148 [Clostridium difficile R20291]
MGRKSSKREYRSYICRKLGITLAFLYYNLREENNMLRVSNVKLGIDKDISLLKDVVLKKLKIKEKNLVKY
SIYKESIDARKKGKMEFVYSVDVEVKDENKILNSKIKDVTKIKEIRYINVPVGDKKLKNNPLVIGSGPAG
LFAGLLLAQMGYEPIILERGLDVDSRTKDISDFWTTRKLKNNSNVQFGEGGAGTFSDGKLTTRIKDIRCR
KVLEELVQFGAPDEILYSHKPHVGTDILKNVVKNIRNEIISLGGQVRFNSKVTDIVVSNDSIQSVIINDT
EKIDTDTIILAVGHSARDTYEMLYSRGIKIVQKPFAIGARVEHPQDLINKAQYKDFYNHPRLGAADYRLI
EHVSNGRTAYTFCMCPGGSVIASASNDFEIVTNGMSEHARDKINANSAFLVNVTPEDFKSDNPLAGVHFQ
QKYEKLAFELGGKNYNAPVQLVGDFINNKTSLNLGSVEPSYRPGYTLTNLSECLPSFVTETMREAFISLD
KKLNGFAMYDAVLTGVETRSSSPIRIVRDENTLESVSIKNLYPCGEGAGYAGGIVTAAVDGIKCAEKIIQ
KYTNNTKI
>gi|260688490|ref|YP_003219624.1| hypothetical protein CDR20291_3149 [Clostridium difficile R20291]
MDYIGIENITPYENTYEFSVYEYDDEITLGSEKLYVCELRVVLIKVNSLYVERLHKSVEAMVLVKNLKKD
LDKTLVVNKIKNFVLDEIWVENLVKENIEVIFVES
>gi|260688491|ref|YP_003219625.1| hypothetical protein CDR20291_3150 [Clostridium difficile R20291]
MSLSLGNAIAVSTNFIKSNPAVPVYNGEEIYAVIYHIEIGYNNGVSPDTKQYIIIDYKEFDLSMDKKNEL
INVAKEYCKSKGIVENENLEINLLDNEEAENFLEKVFNNMKVIRGLITKKG
>gi|260688492|ref|YP_003219626.1| putative protein translocase [Clostridium difficile R20291]
MEVILLGRNELCPCGSGKKYKKCCLNKDIVSERACRKTELSQKQYTDLYSKLYDYSRQDKFKEECEKAKE
MFYIMQNDSVNEKFERFFNTYLIQDHIMENKKVMTVGFLEENGANLSQSEVSILKSMFESYVSIYEVKEV
SAGKIVLKDCLSGNELCTEDVKLLRSFKIGSCMIARIVDIEGTNILIDITISISNEVKDIILKDIMNLFN
QYQDVYKDMKSFLIYHTHILYKYIQQLLDPSIAEYLKRERDKNDTKVNSENELAEEECKVLDTLKENVEK
ENIDACIEFWNEYKKNHENIKGAENGWAAAVEYYVKKEAGQPITQVQISKKYDISSSTLGKRYKDLKIS
>gi|260688493|ref|YP_003219627.1| hypothetical protein CDR20291_3152 [Clostridium difficile R20291]
MRLNNREKNLLKILLILVIILASDIAVSYLEENLTSLKNEKQNIINKINNQDNYQIKDNKHIDDKYIESV
ELNKNEELKNNFNNSFLDKKTNKDIVLLVENELRDIVNVEYINQESSLDNHNKKQVNLEIKVNGELANVL
KLEGVMKKLRLNNKLEKIEINKLKVNNFDVQNIPNEYKQEKDNIVECKMTVRVI
>gi|260688494|ref|YP_003219628.1| hypothetical protein CDR20291_3153 [Clostridium difficile R20291]
MKVDKTINFLNGFKKTKPCNKIYKIIIVLILTCILFKSFMYVKSINELEDYINQNKLVDKSKHTLPTTDK
TREKFSKIKLNEIKKIYETIGINSITKISIDKNKLEMEGVCSDLDVLNNLRKIKYIKYYYIDSIVRDGEY
YRFRIKS
>gi|260688495|ref|YP_003219629.1| hypothetical protein CDR20291_3154 [Clostridium difficile R20291]
MAIIKKILNLEINDDYIRLVFLRKSHKKVFIDKSIIKEINFDIKNDSNSIEKIKYIEDVVRFVKEEIGKS
KILYKNLYFNIQIQDIVIRNVEVLNTKKKRDILSMIEFEITQYIPININNYSIKYKVINSKNDKLNIQVI
LFPKSIIQLIKNISENLNMNPKTININFDILQKLINLNLIENFSEEGVFIECKKSQLIINITKDKKIRET
YLLSKEGKSYEFIKRLLRDFKYVYYYGIENCFIEEYFKYTDKSIEVNPLRLKDKVKVENNFDADLEDNRI
NYINSIGMII
>gi|260688496|ref|YP_003219630.1| putative type IV pilin [Clostridium difficile R20291]
MINLINKKRKGFTLVEMIVVVTILGVISSIALVKYSKVQESAKLNADYTNAANIVTAASMAINDDEKTID
SLSVETLKEKGYLNTVPVPQSTSGKFELVINDSGTDISVNINSKQFYPK
>gi|260688497|ref|YP_003219631.1| putative type IV pilus-assembly protein [Clostridium difficile R20291]
MRLSKNIFYNLEKFYLVLNRISDKEIRVICKEIGILLESGCEITKIFEIIESQSSKKVKNLLSIVSNHIQ
KGNSIAESFQITGIFSKFFISMIKAGETSGNLDIIMSDLSNYYDKEYKLKMKIITISIYPIILIILSILS
MLFIFVFVIPNFQVVFTNNGIEPPLITRVLMGISTVVTNNLAYIIFSFILFSIGSIYFFITNDNIKKLIN
SLKFKIPFIKKINQLVATTRFSRALSVLISSGIQIVEAIDMSASVIDNEFIYERLKISNNYIKKGNSIGK
SLNLANVFPKLFISMANTGEESGKLDKSLNVINKFYENELNNKIEQIMKFIEPMLIVFMGLIIGTFILAM
VVPMFDAITNF
>gi|260688498|ref|YP_003219632.1| putative type IV pilus-assembly protein [Clostridium difficile R20291]
MINIILEESSLPMLIPEKLAKKYNVFPVEFQDDNLVVEIEDEDIYALQDLRLATGKEIILKKEKKELISE
KIEKYYNSFELDEDYAKKLFENLLEKAIKENASDIHIEPFKEHLIVRMRVDGELKEVSKFLVDVYPSLST
VIKLKASMDITEKRLPQDGRVDIKLGGNLIDIRVSSIPTVYGEKIVLRILNRDTFLKDKLELGFSEEAIK
SINRIINKRAGVLLVTGPTGSGKTTTVYSLLNDLKGINKNIMTIENPVEYKMDGISQIQVNSKVGLSFDV
GLRAILRQDPDIIMVGEIRDAETAKIAVRAAITGHLVISTLHTNDAVSSIARLLEMQIPPYLLNASLIGV
ISQKLVRKVCNHCSHEIMIKDNFSGDVNTKVAVGCEKCNDKGYFGRTAIYEILEINDDIKTCIRNMEDSS
TIKDVAQNNGMITFEDSCKRLINEKITTLEECLVVNEMI
>gi|260688499|ref|YP_003219633.1| hypothetical protein CDR20291_3158 [Clostridium difficile R20291]
MKKQYVFIILASTILGILVGTIFRDYSNEETVYTSKDKSIRKEIKMTRKSIKELTKEKDKLDKEINSMKQ
NQKNSEEISEIETLRDSLSYSDVKGSGIILSIDAIDEKTGNIANSIDYNKILVKVINELKVNGGKYIEIN
GQRINQYSEVVLAGSHININGVPVAQPYEIKCIGDKEKLSNYVDKGSKYLDSIQTNYPMKISIKTEENIS
MKKMNIPNKLKYIKGD
>gi|260688500|ref|YP_003219634.1| putative ATP/GTP-binding protein [Clostridium difficile R20291]
MEGKVKKAFPGGNTSQGSYSFFDYIIPENVKRVFCLKGGPGVGKSSLMKKIYKEFLHRGYDIDLYHCPSD
PSSLDGLVIKKLGVVLMDATAPHTMDPKLPGALDEIINLGDYWNTEELEKNKQEISVYDKDISNSFKRAF
KFLKSAEPIFRDIEEKYSDCMDYGKVNLVTEEFIKRLFDGVKSTGNLKREKHLFGSAITPVGCLDYTENI
LKDVKKVYYLDGEIGTGKTTLLNKVYKKATEKGLNVEVYHYPLIPEKIETVLLTDLDIGITISTTFKEED
TIDLNQFLNREKLLKYEEDIKFDEKVLDDLICWAVLNLKRAKSKHDIIESYYSPNMRFDEVGKLRDKLIK
RILKYEENL
>gi|260688501|ref|YP_003219635.1| putative transporter [Clostridium difficile R20291]
MKQKWIVLIIICIGVFMSTLDGSILNIANPTIAADFKINMSQIQWVVTAYMLVVTATMLFFGKLGDKVGS
NRLYALGFFIFTIGSFLCSMSNNLSTLISSRIFQAVGASILMATGLGIVSNAFPANEKGKAIGITGAVVG
IGNMSGPVIGGIILEHFGWPSIFIINIPIGIIAVFLGIKFLPKPVLDEQNKSFDISGLLLFASCTTLILL
AMNEKGNTRLYLGITALIIFLLLALREVKFEQSFIDLPLFKNRNFTVGNIIGVACYFPQMAVSFLLPFYL
EQLKNLSPMMAGYVMTVHPLIMVLIAPIAGSLSDKHGAKNILTASFSFMTISLVGMALLKADSPLYLLIV
CLVIFGLGLGAFSSPNNSSILADVPPQKQGYGGSFLATIRNLSFALGTAFFSSFFAQSLTYNQKFKSHTS
AYVIASNQSYWIAASVCFIGLILTVFFMRKTDKSIS
>gi|260688502|ref|YP_003219636.1| putative GTP-binding protein [Clostridium difficile R20291]
MSAVNKSQYPAEGIPEIALAGRSNVGKSSIINTLLNRRNFARTSQTPGKTRTINFYLINNEFYFVDLPGY
GYAKIAKSEKEKWGGIMERYLESRQELCSIFLLVDIRHEPTADDKLMYEWIKHFGYNCVVIATKADKISR
GQYQKHISIIRKKLQMESSEKVIPVSSLKKTGVEELWEEIVNQYNQHGYEITVD
>gi|260688503|ref|YP_003219637.1| ATP-dependent protease La [Clostridium difficile R20291]
MLMEQNYTKIDHELPLIPLRGLAIFPYMILNFDIGREISLKALDQAMMDEELIFLTSQKEAEVDEPGEED
FYHVGTICKVKQMIKLPGDTVRVLVEGVSRGRVKKIEQEDGYFRAVIEEIVFNSDNLDSETEVEIEAFVR
NVFDAFEEYINIGNRVSPEILISLADIEDVDRFIDTIAANIYLKSSQKQEILEEFDIRKRLELIYSILLE
EIDILKIEKKITLRVKKQMNKVQKEYYLREQLKAIQKELGEEEDINSEADEYREKLKKIKAPKTTKEKIE
KEIDKFSKISSMSPDVSVSRNYLDTIFSLPWNKETKDKLDITKAKDILDEDHYGLEKVKERILEYLAIRT
LAKSLKGPIICLVGPPGTGKTSIVKSIARALNRKFVRISLGGVRDEAEIRGHRRTYVGSIPGRIINGVKE
AQTKNPVFLFDEIDKMAADYKGDPASAMLEVLDPEQNKDFVDHYLEIPFDLSKILFVTTANSLGNIPRPL
LDRMEVIEVSGYIEEEKLNIARKYLLPKQIKEHALKENFIKIDDETLRSIINHYTREAGVRTLERTIGKI
CRKVAKKYVEDPTLEEVVINKSDLETYLGKDMFKYQLAEVNPQIGLVNGLAWTAVGGVTLEVEVNVLKGK
GEIVLTGKLGDVMKESAKTGISYIRSIVDKFDIDPEFYKTNDIHIHIPEGAVPKDGPSAGITMALAVISA
LTKRPVPGNIAMTGEITLRGRVLAVGGVKEKLLAAHRAGITKVLIPKECEADLDEIPENVKEKMEFVLVE
HMDEVLEQALLKSGENNEN
>gi|260688504|ref|YP_003219638.1| chromate transport protein [Clostridium difficile R20291]
MLKLFLTFLKIGAFTFGGGYAMVPLIQDELVNKQKLLEQEEFIDYLSIAQSYPGVLAVNISVLLGYKLYG
IPGVLICTLGSALPSFCIVLVLSYLYFKNSSSKILDGFFKGVAPVVIALILYSFTSMFKKLPKSKTNILL
LIIAVLSVGVFNISPIYLIIGGGVYSLCQK
>gi|260688505|ref|YP_003219639.1| chromate transport protein [Clostridium difficile R20291]
MSEIILLFLIFLKIGAFSFGGGYAMLPFIQQEFISKYHFITNQEFLDLLAISQSTPGPVAINSATFVGFK
TAGFFGSLAATIGVTIFALIGLTIISKLFSKFKNNKKVENLLTVLRPITLGFILSAAFSSAKEVNWDLYG
IIAFIASFYLLYKGKIGSIAIVFVFGILGILLTFL
>gi|260688506|ref|YP_003219640.1| ATP-dependent Clp protease ATP-binding subunit [Clostridium difficile R20291]
MSKYEEKRQLKCSFCGKNQDQVRRLIAGPNVYICDECVELCDEIIQEEIEDTIDEDTTSLPKPKEMMEIL
NDYVIGQEKAKKALSVAVYNHYKRIYSKKSSSKDIEIQKSNILLLGPTGSGKTLLAQTLARTLNVPFAMA
DATSLTEAGYVGEDVENILLKLIQAADFDIEKAERGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLK
ILEGTVANVPPQGGRKHPHQEFLKIDTTNVLFILGGAFDGLEKIIQKRGGDKTLGFGAKIESKKELDLGK
LYEKVLPEDLLKYGIIPEFIGRIPVLATLELLDEDALMQILQEPKNALVKQYKKLLELDDVELEFEEGAL
RAIAKKAIERNTGARGLRSIVESVMMETMFEVPSRDNIKKVIVTEKSVNEDSVNPIIVLKDQEESA
>gi|260688507|ref|YP_003219641.1| ATP-dependent Clp protease proteolytic subunit [Clostridium difficile R20291]
MALVPVVVEQTGRGERSYDIFSRLLKDRIIFLGDQVNDATAGLIVAQLLFLEAEDPDKDIHLYINSPGGS
ITSGMAIYDTMQYIKPDVSTICIGMAASMGAFLLAAGAKGKRLALPNSEIMIHQPLGGAQGQATDIEIHA
KRILKIKETLNEILSERTGQPLEKIKMDTERDNFMSALEAKEYGLIDEVFTKRP
>gi|260688508|ref|YP_003219642.1| trigger factor [Clostridium difficile R20291]
MNYNTVIGYYINITRRIRRMKAELIKKEGNKVTLKITVDNNKFEAAVNKAYNKSRNKYNIPGFRKGKAPR
IVIETQYGKGIFYNDAIEILFPEVYPEAIKELDIDPIDNPDLDIEEISKDNGLVMVLNVEVKPEFELGNY
KGIEIAKVENTVSDENVDAKLQEMVEKNARLVSVEDKALEDGDTAIIDFEGFENGVAFDGGKGENYNLVI
GSNTFIPGFEEQLVGKKAGEEVEVNVTFPEEYHSQDLAGKPVVFNVKINDVKVKELSALDDEFAKDTSEF
DSLDELKADVRAKLEEEAKNRADAETRNSVVEKVAENTEIEIPEVMIQHQIDNMLNELNYQLQYQGFGLQ
QLLEMTGRTMEELREERKEDAKKLVKSSLVLEAITKAEGIEATEEEFKAELEKMASAYNMEVEKIEASLR
DADKEDIKGQIKIRKTIDLLVDNATIA
>gi|260688509|ref|YP_003219643.1| putative phosphoesterase [Clostridium difficile R20291]
MKIGIVSDTHMMIKNMEKTIPYLKECDLIIHAGDNFTDSRYIHSMTNVGIIAVKGNCDFDAVEEEVVFEV
ANKTIFLCHGDKYGVKYGTNMLEKKATEVDADIVIFGHTHTPFREIKDGVLYINPGSTSLPRGVSYKSFV
IMDIEEDDIKIEEIRI
>gi|260688510|ref|YP_003219644.1| ribonuclease Ph [Clostridium difficile R20291]
MTRSYDRSNEQIRPVKITRDYTKYAEGSVLIEMGETKVICTASVEEKVPPFLRNSGTGWINAEYSMLPRA
TQQRKIRDASRGKIDGRTQEIQRLIGRAIRSVVDLNKLGERTIWVDCDVIQADGGTRTASITGAFVAVAE
AIYKLYKAKTIKEMPITNFVSAISVGIVNGIHMLDLCYEEDSKAQVDMNIIMTDKCEFVEVQGTGEEKPF
SRADLNLLLELGEKGNKELIRLQREALGEIADEILGMDYGNEVVIATNNAHKLEEIGEILKDFEYKVYSL
KDVDLAGIEIVEDGKTFEHNALIKARAIAKKTKLIAISDDSGLEVDALGKKPGVYSARYAGEHATDEENR
KKLLKAMQNVPMSKRNARFVSAIAVVFPDGKEFVVRGICEGMIGFEEKGKNGFGYDSLFIVKGYDKTFGE
IPSVIKNSISHRANALKLMKQEFIKRVVK
>gi|260688511|ref|YP_003219645.1| DNA ligase [Clostridium difficile R20291]
MQKVSVKDEINKLIETINYHNERYYNQDSPEISDYEYDKLMKELISLEEEHPELKRIDSPTNRVGGKPLD
KFNQIVHKTPMLSLSNAFSEQDLRDFDKRVQEYVGENVEYVVEFKIDGLSVGLTYNNGEFEKGATRGDGV
VGEDISQNLMTVKSIPLKINDKKELIVRGEVYISKDNFRKVNEQQEEQEQPLFANPRNLAAGSLRQLDPK
LTAKRPLDIFVFNMENIEEYDLESHSESLEYLEKLGFSVSQSYKVCKSIDEVIEHIEYWTDNRGNLDYEI
DGMVIKVNNIKQRDEMGYTAKSPRWAIAYKFPAEKKKTKIVDIIVEVGRTGTITPSAILEPVRLAGTTVS
RATLHNEDYIREKDIKINDTVLVQKAGDIIPQVLEVIKEERTGDEIDFKMPEKCPVCSEPTIRLEGEAAV
KCINMSCPAQIRRGIIHFVSRDAMNIDGLGESIITLLLNEKIIQDVSDLYYIKKEDVVDLERMGEKSADN
LINSIEKSKENDLWRLINGLGIKFIGVKAAKILAYNFKDLDEVISATSEQLEELEEFGSIMANSVVEFFK
EDKNMNVINKLKNVGVNTKSLDNTGEKVEKIFEGMKIVLTGTLPTLKRNDAKDMIEKRGGKATSSVSKST
TFVLAGEEAGSKLTKANDLGIKVIDEERFLELLKLSSKDEVKAVLES
>gi|260688512|ref|YP_003219646.1| putative D-isomer specific 2-hydroxyacid dehydrogenase [Clostridium difficile R20291]
MKVLFTINYGKEKFDKIRELGYDVIHYSEDSIENNEDVNTADVLVTYNPFERLDISKMKNLQYIQTTSVG
IDQLPKEEVLKRNIKIANNRGGYSVPIGESIVLYILEIYKNSAKFFKQQQNKEWKMDFSVSELYGQRVGF
LGTGTISSEAAKRLKAFGVEIWGVNTDGSSKKYFDKCFATEDMNIVFEECDIVVVAMPSTKSTDGIVNKD
MFKLMKDGSVFINVGRGNTVNQKDLEECVEKFRGVALDVFESEPLNKDNKLWECENVIVTPHNSWVSDKN
KERTFNMVYNNLKHYIMENKPVDNVVDISRGY
>gi|260688513|ref|YP_003219647.1| hypothetical protein CDR20291_3172 [Clostridium difficile R20291]
MDKMSFEKINNNNLDKIHNRKCIMLVNFNKKELSLIKNVSNFAGIRDHIILSEKNGENIIRDILDGNISS
ECENGIKSKSVIFNNTPSTQVNAFLEGLKKVRINRPFTAMVTETSIDWTLNNLIENLVQERNAMSLGKTI
EHK
>gi|260688514|ref|YP_003219648.1| putative transporter [Clostridium difficile R20291]
MNTLLNNKFSIKNFSNAWVIVLGCMLIQAVPFSIVASIQPQFISYVVEGEGFSLASFSLIFTIGTIASAI
ASPFIGVLFSKVNIKILYLLGCIISSIAFATFSICTELWQFYTVSCIVQIGATIISAIGIPVLISAWFDE
ESKGKALGFAFAGGSIGSIFLQPLAVRLLATQGYSHSYLIFGIIALIVGIPVILFILRMPKDINEKVKSK
GKKEKASDTISPSVWGYTLKEAKKIKYFWIMTIGFIFVGIYVSSLSVQYPTYLRNYLNPILIGTVGSTFA
LFALIGNLFGGLLFDKFGQTKPLIISFVLVLIATLSLLLVDKSSTFAFVFAILKGLSVFAYMIGPAYLTG
SFFGQKEFGSIYGIVQLIFAVGFALGSTLFGLLVDNFGYRFSWSIIILSVIIAYTLLIITSIGMKKLNKE
RLDKLMQ
>gi|260688515|ref|YP_003219649.1| electron transport protein [Clostridium difficile R20291]
MNYFVIADPDKCIGCRTCMIGCVVAHSDEDIFYQNPDEINFNPKLSVIKTKEVSAPIQCRHCEDAPCAKA
CPNGGIVRVGNTIKINEENCIGCKTCMLACPIGAIDIVTLKDVDEGKLCFRERMTANKCDFCIESPEGPA
CVNVCPTKAFTIVKDEDIDSKVKNKRKLAIL
>gi|260688516|ref|YP_003219650.1| hydrogenase [Clostridium difficile R20291]
MIINIDKDLCTGCRECSKVCPVNAIEGEEGKPQEINLDRCVMCGQCVQTCKSYASVIDEGFEFLQEKKQE
REIPESINEPIFAAYNVCDIDKVKKALSDPNVFTMVQCAPAVRVALGEDFGYYLGYLGAGKMAAALRALN
FDRVYDTNFAADLTIMEEGSELIKRVTEGGTLPMFTSCCPAWVKFMEKNYPKLTNHLSSCKSPQQMGGAI
FKTYGAEINNVDASKIFSVSIMPCTCKKYECDREEMDSSGYRDVDVVLTTRELAYLIKDMGIDFKNLREE
KFDSPLGSYSGAGTIFGVTGGVMEAAIRTGYELITGESIPDVEVKQVRGENGFRKSTIKIGDLDLRVGVV
SGLKNVIPVLEDLEKGKLDVDFIEVMTCPVGCVSGGGQPKILLEEYKELAYENRTKATYVHDEHLAIRKS
HENPDIKKLYDEYLVEPLGEKSHHLLHTTYCIGKEVAK
>gi|260688517|ref|YP_003219651.1| electron transport protein [Clostridium difficile R20291]
MKNKIGSFVIADPNKCTGCRACEVACFTMHNQHNNVGYTVGTVDIPVIPRLYLVKGDNFCMPIQCRHCED
APCLNSCPQKAIVKENNIMSVNEEKCIGCKTCLLACPFGAIDLLPQYEDGKEVEQVILDENKKIAYKCDL
CKDNEKIACISACPQEALKLVTPIDDKKAKNRQAALSLLLTNK
>gi|260688518|ref|YP_003219652.1| hypothetical protein CDR20291_3177 [Clostridium difficile R20291]
MCTKKEEQKCSKCEICGVLIDDTDKVYNNTYNLCKKCKRNISTEKIVKYINIYDESK
>gi|260688519|ref|YP_003219653.1| formate dehydrogenase accessory protein [Clostridium difficile R20291]
MNNIYSKTKLQENSKDKVFENSYSLVDYKYLNSFNVEVSKINEHEVSIDNEEIIAEYPLSFILNDKYVNT
FLCTPYNLEELIVGFLKTKGYIENKKSLLKFEINESERFAKVTIQEKQKNQDEQIIFLNSLDYITCASVK
SNIKINYDTIYSIMDRNLNSSELFKNTGGVHSVSVFNFDKKIVTCEDVARHNAMDKAIGFCVLNDITLKD
KIVAVSGRISLEMILKAAMTQIPIVVSKSAPTNLSIELSKKLNITLIGFVRGRRMNIYANPQRVIKK
>gi|260688520|ref|YP_003219654.1| formate dehydrogenase h [Clostridium difficile R20291]
MEKKILTVCPYCGAGCQLYLVVKDNKILRAEPANGRTNQESLCLKGRYGWDFLNDPKILTPRLKKPMIRK
QGVLEEVEWDEAINYTASRLNEIKEKYGPDSIMGTGSARGPGNEANYIMQKFMRATIGTNNVDHCARVHA
PSVAGLAYSLGSGAMSNSIPEIENADVLFIFGYNGADSHPIVANRIVKAKKNGAKLIVTDPRVTESARIA
DIHLPIKGGTNMVLVNAFGNVLIEEGLYNKEFVQNHTQGFDEYKEIVKPYTAKYAEKITGIPEELIRKAM
REYAKGKKAMILYGMGVCQFGQAVDVVKGLASIALLTGNFGRESVGIGPVRGQNNVQGACDMGALPNVYP
GYQNVTDDKIREKFEKTWGVKLSPNNGYSLTQVPDLVLKEKKLKAYYIFGEDPVQSDPDASEVREALDEL
EFVIVQDIFMNKTALHADVILPATSWGEHEGVYTCADRGFQLMRKAIEPQGDVKPDWQIISEISTAMGYP
MNYKNTKEIWDELRQLCPSFLGATYEKIETQGCVQWPCKSESMEDKGTMYLYEGQKFSTPNGKGNLFAAE
WRPPMEVEDDEYPFSLCTVREVGHYSVRTMTGNCRTLSSLEDEPGRVQINSNDAEKLGIEDDELVRISSR
RGSVITRATVTDRVKEGATYMTYQWWVGACNELTIANLDPISKTPEYKYCAVKLEKLEDQELAEKCVREE
YQSLKDKMTATNI
>gi|260688521|ref|YP_003219655.1| hypothetical protein CDR20291_3180 [Clostridium difficile R20291]
MDRLKNIRKSLLQYTFLFLLIGITIYLVFKTLDIKMLSNVMVMVDKKFLFIGALAIMCHIMLEGVVMKII
IESTHKVNIRFIGFKLAIMGFYYNLITPFASGSQPVQIYVLKKCKMPLSKASAVVTNKSIIFQIVVTFYC
TILVLMNFAMLEKQMKMIMPLVFLGIAINSFVLIMIILVILNPKKIKYFMRITIKHLSKIKFLKFLDNKI
ESIESFIDDYSKAINFFAKNKKVLISTIIVTFIQLSAYFSVSFWIYKAFNLQGYSYIYILTLQAFLYMAI
SPIPTPGNVGANELAFFTIFKSVFPQPLMGYAVFLYGGFMYYLILIGSGIFTVITHYRMKNRIGRNIVLS
EN
>gi|260688522|ref|YP_003219656.1| two-component response regulator [Clostridium difficile R20291]
MSKILVVDDELDMLKLIENVLKRDGHEVKVISDVEKAMNMDFNYFNLIILDVMMPKMDGFEVCKTIRNKV
DCPILFLTAKNMESDIMYGLGIGADDYITKPFGVGELRARITAHLRRESREKKNLLTISNVQFNFLGKEV
SIDGKKINFTKSEYLICEFLAKNKGQVFSKERIYESVYGFDGESDISTITEHIKNIRSKLKQYDIYTIET
VWGIGYKWV
>gi|260688523|ref|YP_003219657.1| hypothetical protein CDR20291_3182 [Clostridium difficile R20291]
MDENITKNNYNVPFDYVRKKLKELDPHTISNLSNIPFNNDLNRFTLNFFDRQYIIDYPSGEVWNSNGSLC
NNFELKILIVRYLINAKGIPRTNKYVTFKEIPGGNVYYPNFLNRTLYRLSEVFTSQIDKYKLVMEKIGAE
KVNMGDLAYRFTYMGNTSMIFILWFGDDEFPPNSNILFDSNIVYYFNAEDLAVVPDTAINAILNKINQL
>gi|260688524|ref|YP_003219658.1| hypothetical protein CDR20291_3183 [Clostridium difficile R20291]
MNVENQSLSDIEIILSHRYDNGADYWTTPDKRLIKGSPFSTLDSVLYLLELGVNPDDTLLKECADLIFST
WREDGRFKLYPNGGIYPCHTANAANVLCHMGYASDIRMQKTFQHFLDTQYTDGGWRCNKFSFGRGPETEY
SNPLPTLNILNAFRFSNYLNKESKLDKAVDFLLDHWTIKKPLGPCHYGIGTLFMQVEYPFRNYNLFLYVY
VLSFYNRAKKDKRFLEALKILESKMIGNKIVVERVVPKLSKLSFCKKGESSEIATTHYYEILKNLEK
>gi|260688525|ref|YP_003219659.1| hypothetical protein CDR20291_3184 [Clostridium difficile R20291]
MCILELIKFELKKIELKHVLIFVIISILCIFITGILDYNELIFYNDVPIMDTYSIAGWLGIIKISDVFIP
IMSAITIIYVFSKDYLGNINEILTLYNKKKYNQFIVFRWCVILAIYTVLLLISITIVYTFTSVKGFNIDK
IDFVYSVKPIDVFLKTFPTLLWYTTFPLMILTLTKNRFTTIAILITYTFADIFFILHMYPFVSMINVNGF
YIQKMFYMPNNIDVRFNELKNYFFINRGSLVVISIIIVFYIARKSTVLKKSK
>gi|260688526|ref|YP_003219660.1| abc transporter, atp-binding protein [Clostridium difficile R20291]
MINKLEIRNLNFNYKNKKALDNINLTLTDGVVALLGPNGAGKSTLMRLLVTLYETSIGEIELNNIKYSKN
NEKIKANVGYIPQDFDMYNNINGQEYLEFVAKMRGVSKNDLKKHIQKVVSKVNLDKFINNKIGTYSGGVK
RRLGIAQALIGDSKLIVMDEPTVGLDPEQRNEFRRLLPEISKNSIVLISTHIVEDIQFNCDKLIILNQGK
ILYDGTINKFIDMVEVYSVVVSNDEFEYLERNIDIIDYRRVKDGVQVKYIGKNTEKLKDSLRIDTTLQDA
YINFLHKELK
>gi|260688527|ref|YP_003219661.1| hypothetical protein CDR20291_3186 [Clostridium difficile R20291]
MNLLNIVESIVSCIKGLARRGINMSSIKVISDFITKIIRKNILFAITVIIINYHLIQRWTHISNRGISFN
DYLSLSVYTCMTISILTMLNVIFYMRKSYDTVKILCRNNFDYFLGISVAVTRNNFIFCCIPIIYAIAYSS
LIRTLSIVTIKSTIFILVFEWFLPLTILSIVISFISVIINNLILKITLSSVFLYLTSTKMLDRVIDIKEP
FFKALFKSLNIFEDQSYAYYSDFVGKVNNSAYVIDKIIPTLFAITLIIVAYLILNDIRKKQIKSLIVIVV
YSILFIGLNYISIDMSTYRDEERSYGEYLKKSNISDIKIKSHDMKIDFKSKSNIKDRIVLLNTSNEELTN
INMILDEIFDIKYIKVNSENIKFNKKKDLIEVNLKESLEPNDEVTLDIEYEGYINVLTSWNQNKYIATKD
DIMLPPGSLAWYPKVNQSSCMAYKINLSSKNNVYSNLPLLNKTSNFLKKDYIFEGKSNDIAIYAGEFKEE
VKDDIKIIYPSDSNVNMDIEEKIKFLIETRNEILGDSKASVDAKKYVDEVDNVMESIKRKKINMILVADL
PSNEFLYEDSKGEKISITIYHWLSGNILIIDK
>gi|260688528|ref|YP_003219662.1| accessory gene regulator [Clostridium difficile R20291]
MFKRLSYKFANILVNNEIVESEDFEIYRYGFETLIYFIVNISVALFIGIIFDRFIHTVIFLSCYCTLRQF
TGGYHARNYKECTLTFAVIYLITIFSANNIDINKYKYLLVLLMIISILTIYKLAPLEHRNKPLSESEKKH
YRKTVQKILFVIICLIILCKILNIFQQYVIYAIISIYWIAILIYIGMKVNNDQ
>gi|260688529|ref|YP_003219663.1| autoinducer prepeptide [Clostridium difficile R20291]
MKKIALNLLKNISALSFGIAVLSANSASSWVAHQAKEPQALQKLKK
>gi|260688530|ref|YP_003219664.1| sensor histidine kinase virs; sensor histidine kinase virs [Clostridium difficile R20291]
MLTNLSIGFWNIINLVSGTIDWIIFFLVIHLVGKRKISNIRYIFTTIIIFIFMAYINVVKVFPNIKILLC
MVIGISFYITSYEDKIYKSIIVSLLFWLGLMIAEGSAVGLVVFINKLNNINITQHENLFRIQAIIMSKVF
LFIGFILFKYFKLSLDFKPKDMILIGIPILSNIVSLLLIFEYNLRVNTITTENLFIFIFAILLILSSSII
LLIVIGKIVQDDKLNLEYELINERIKTNYRNYENINEVHDRLKYVYHDLKNHMICIKNYDTKEEIISYID
NLEFQISEFEHFKNTGNKTLDLILAEKISICKKYDIQIEDNINISKLNFIENNDICSIFANSLDNAIEAC
MDINNELEKRIEVKATYINKFAIIKFINTKVNDIKLIDKRIQTSKDDDKIHGIGLASIKYIVNKYGGETI
VNYSDNEFILKIMIPIKS
>gi|260688531|ref|YP_003219665.1| dna-binding response regulator, lyttr family [Clostridium difficile R20291]
MNRNFIYLLKIYKKGCLRIVISIGICDDELHYRIKIKDILSEILSSYPINYNIYEFSSGEELLNNYPKDL
DILIMDIQMKTINGMDTARKIREFDHKLEIIFVTSFVEFMQEGYEVKAYRYILKPINKEKISKSVLPCIN
EMMKKRNNYLTINVKNYVDRIKIDSITYIETDRPNILIYTHDDMYITKMSISKIEKILNEYGFFRCHNSY
IVNLKLVESMSGSTVIVDGKSIPISKYRVKGLKLAITNILGDIVC
>gi|260688532|ref|YP_003219666.1| hypothetical protein CDR20291_3190 [Clostridium difficile R20291]
MKKITWEVEYISQLPVIRYCKKCGKKTEYICSGLFRVNAQHKYLDIWLIYKCSNCDSTWNSTIYSRVNPK
SLNPETLEQFHTNDYNLAKQYAMNTELLHRNGAEVGIPEYKIVGQEININDLTQVHIISKYPCQLKVSTL
LREKLGLSRKVFDEMLDCGIIRSNSGVDLKKGKLNYEIMLDIGKEKQKSSN
>gi|260688533|ref|YP_003219667.1| hypothetical protein CDR20291_3191 [Clostridium difficile R20291]
MSYKKAIHILPEELLELIQEYVDGEYIYIPRKSNNKKEWGSSTSTREDLSIRNMQIYEDYQVGYDLKYLS
EKYYLSLKSIQRIVLQEKRKDS
>gi|260688534|ref|YP_003219668.1| hypothetical protein CDR20291_3192 [Clostridium difficile R20291]
MKNKIETSMNNFVKNYHKSNNITTKWQELLFAYASAEDDMFQKLKSVVGTSHAMPKDFLENGKTIITYFI
PFDESVNNSNIGGFECSEIWARAYIETNMLISNLNDFLCEELEKMGANSYAIPGSYNFDSEKLVSDWSQR
HVAFIAGLGTFGLNNMLITEKGCCGRIGSIITSLELEPTKRPENEYCLYKHNNSCKKCVNKCVKEALKED
GFNRNKCYEMCMINEKKYTYIGGCDICGKCIVGVPCSVINPSR
>gi|260688535|ref|YP_003219669.1| putative exosporium glycoprotein [Clostridium difficile R20291]
MSRNKYFGPFDDNDYNNGYDKYDDCNNGRDDYNSCDCHHCCPPSCVGPTGPMGPRGRTGPTGPTGPTGPG
VGGTGPTGPTGPTGPTGNTGNTGATGLRGPTGATGGTGPTGATGAIGFGVTGPTGPTGPTGATGATGADG
VTGPTGPTGATGADGITGPTGATGATGFGVTGPTGPTGATGVGVTGATGLIGPTGATGTPGATGPTGAIG
ATGIGITGPTGATGATGADGATGVTGPTGPTGATGADGVTGPTGATGATGIGITGPTGATGATGIGITGA
TGLIGPTGATGATGATGPTGVTGATGAAGLIGPTGATGVTGADGATGATGATGATGPTGADGLVGPTGAT
GATGADGLVGPTGPTGATGVGITGATGATGATGPTGADGLVGPTGATGATGADGVAGPTGATGATGNTGA
DGATGPTGATGPTGADGLVGPTGATGATGLAGATGATGPIGATGPTGADGATGATGATGPTGADGLVGPT
GATGATGATGPTGPTGASAIIPFASGIPLSLTTIAGGLVGTPGFVGFGSSAPGLSIVGGVIDLTNAAGTL
TNFAFSMPRDGTITSISAYFSTTAALSLVGSTITITATLYQSTAPNNSFTAVPGATVTLAPPLTGILSVG
SISSGIVTGLNIAATAETRFLLVFTATASGLSLVNTVAGYASAGIAIN
>gi|260688536|ref|YP_003219670.1| putative glycosyl transferase [Clostridium difficile R20291]
MIAISLCMIVKNEEEVIGRCLECVKDIVDEIIIVDTGSTDSTKEIVSKYTDMVYDFEWIDDFSAARNFSF
SKASKDYTMWLDADDIILEADREKLLKIKESLDTSIDIVMAKYNVSFDENGNPTLSYYRERLFKRSSNHK
WVDPIHEVVPLFGEVFYSDIAISHKKLHRQDPLRNLRIFEKMISEGKTLEPRHQFYYSRELYYNARYKEA
IEGFTKFLDSSRGWIEDCISACRDLATCYYLINDEKSALYSLFRSFEFDEPRAEICCDIGKHMFDRQKYK
EAIFWYKVALTRDKNDTNGGFKSNDCYGYIPSIQLSVCYDRLGESDKAIYYHEKTKEIKPNDSAVLHNEN
YFSKFKNS
>gi|260688537|ref|YP_003219671.1| ATP-dependent Clp protease proteolytic subunit [Clostridium difficile R20291]
MSLVPHVIEQTGQGERSYDIYSKLLKDRIIFIGEEINDAIASLVVAQLLFLESEDPDSDIIIYINSPGGS
ATSGFAIYDTMNYVRCDVSTICIGMAASMSAFLLAGGTHGKRCALPNSEIMIHQPMGGAKGQATDVKIAV
DNILKIKERLDKILSENTGKSIEDIRRDTDRDNFMTALEAKEYGLIDYIMNRNE
>gi|260688538|ref|YP_003219672.1| AraC-family transcriptional regulator [Clostridium difficile R20291]
MEIIDYIEENLTENLNLDKIAYIANYSKYHLHRMFTNVVGCTIHQYIQRRRLTEAARQLIFTDKYIIDIA
ITVGYSTHQSFTLAFRNLYKESPQVYRNKDEFYPIQQRFVLNLNHQIQSEKCISYANMNYKQRRDEINSY
LNFNINCEVKVA
>gi|260688539|ref|YP_003219673.1| GntR-family transcriptional regulator [Clostridium difficile R20291]
MWITINRNSNISLSRQIYCEIKDMILDGSLKFEQKLPSSRTLSKELSVSRNTVLDAYNQLIAEGYLETRN
GYGTIVAKGISGHKVDFKLNDTFRDEKDLHTNKQKNYIDFRSGVPELKLFPRKELSKLYKQILYDLSDSD
FRYGSTAGVWVLRVEISKYLFRTRGIRCNSKNIMIVSGSTQGLSLISQLLYKSNKKVAVEDPIHKGLLKV
ISSIGYSVVGIKVDDKGMNTNLIKSIKGISFVYTTPSHQYPLGGILPIQRRLELIKCATENDYYIIEDDY
DSEFRYEGQPISSLYELSPNKVIYIGSFSKILSPAIRVGFMLLPDNILESYKTLKMYSDVHTETILQYVL
AEFIGNGGLEKYIFRMKKLYNRKRKYLIKVLNTEFKNEFKIKGEAAGLHIVAHFYNVKFTESLIHKIFEA
GIKVYPIQQYAIENILEYDHEIILGYAHLSFDEIEKGVKILSKIIHMNQGT
>gi|260688540|ref|YP_003219674.1| hypothetical protein CDR20291_3198 [Clostridium difficile R20291]
MLEISHKVKEIYPNIKFGVMVINITHSKPNKENFLVLKNSTIKNIIEQHPEYNRKEKIKTEPVSSYIKYY
KKFKKTYPVLLQLESILLKSKGIPDVGVTIESMFLAELKNLLLTAGHDLDKMELPLKIELANGSEHFYGI
GGKEHILTKDDLFLSDNIGILSSILNGPDNRTAITKDTKNIMYFVYGPDKISEKQIQDHLNDIKHYISSA
FPDLKVNSIDIF
>gi|260688541|ref|YP_003219675.1| putative nitroreductase [Clostridium difficile R20291]
MNFVELTKKRYSCRNYQDRKVEKEKLEKVLDVARIAPTGGNRQPQRLIVIQEKEGINKLSKAANIYDAPL
AILVCGDKDKVWTRPFDGRQLTDIDTSIVTDHMMLQATELGLASVWVCYFNPDIIREEFSLPDNLEPINI
LLMGYESKIPESPERHEKTRVPLSEIVSYETL
>gi|260688542|ref|YP_003219676.1| putative transcriptional regulator [Clostridium difficile R20291]
MKKCLDNYSCPIEATLALIGGKYKTLILWHLKDTILRFNELKKLIPKATPKMLTQQLRELESDGLIIRVV
YPVVPPKVEYSLSDFGKSIIPILDSMCDWGSDYLESL
>gi|260688543|ref|YP_003219677.1| putative protease [Clostridium difficile R20291]
MKVLVFLAKGFETMEFSVFVDVMGWARNDYGHDIDVVTCGFKKQVMSTFNIQVLVDKTIEEVCVDDYDAL
AIPGGFEEFGFYDEAYDSSFLNLIREFNSKEKIIASICVAALPVGKSGVLKNRKATTYHLKNGKRQRQLS
EFDVNVVNEPIVVDKNIITSYCPETAPHVAFKLLEMLTSREQMDEVKLAMGFKL
>gi|260688544|ref|YP_003219678.1| ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MSLLKVTNLSQCFMDKSLYEKANFDLFKGEHIGVVGQNGTGKSTLIKILLGEVVPDSGEIKWQPNINIGH
LDQYAEINRDTTISLYLHTAFEELYKIEKEMNLLYQKSAISENEQYLIKASDYQEQLIASNFYSIDNEIN
KIANGLGLDSIGMNRVVEELSGGQRAKVILAKLLLSNHDVLLLDEPTNFLDKEHVEWLSNYLNTFNGAFI
VVSHDFDFLEKISTGILDIEFGMIKKYHGKYSEFLKQKSHLREDYIRRYQAQQKKIEKEETFIRKNKAGV
NSKIARGRQKQLDKIERIAPPSFTGKPNIQFSEIEISAQNALTITNLEVGYYYSLLPKLNFSVDGGQKIV
ITGFNGIGKSTLLKTLVKDIPRISGDFQFSEQVKIGYYEQDLKWENPDKTPLQIVADKYPKLNTKEIRRH
LARCGVKEEHVSRSVSTLSGGEQSKVKLCCMMLSPCNFLILDEPTNHFDAETKDALQNALKQFRGSIILV
SHEEKFYKGWIDKVFNIEKQLV
>gi|260688545|ref|YP_003219679.1| two-component system response regulator [Clostridium difficile R20291]
MNLSIRDVTISNVKARVVNIKKQDIDTARLEYNKFLWRDFNMDTYFNKKILLVDDEKDIVDLIEEVLIND
GFKNIIKAYNGLDAISLCKIACPDVVILDIMLPDIDGIEVCKKIREFSYCSILFLSSKNDDIDKILGLSS
GGDDYITKPFSPREIAFRVKAQLRRQQYQSIVPSDSAVIKIGDITIDIEGNRVYKDRNEIELTGREYHLL
SYMAQNVNKIIGKERLYEQVWGVYSSICDNTIMVHIRHIREKIEDNPSNPKILITVKGLGYKLVNRID
>gi|260688546|ref|YP_003219680.1| putative multidrug efflux protein [Clostridium difficile R20291]
MYRKINKMSDVYYSENHEQDNLYEQDNLLAQRFNLFTLLKFAFPTIFMMIFMGLYTIVDTIFVSRFINTN
ALSAINIVCPIINLIVGIGTMLATGGSAIVARKMGNGDIEGANKAFSLIVLSGVVIGVIITGIGIVFMDY
IIIWLGASEVLIKYCRSYLFIILVFASANILQVLFQCLFVTAGKPQFGLWLVLGAGCANIILDYVFIVLL
QMGISGAALATGVGYLIPTVSGMVFFSKNKELLKFCIPRLDKRILFEACFNGSSEMVGQLSTAVTTFLFN
AMMMKLIGEDGVAAITIIIYSQFLLTSLYIGFSMGVAPIISYNYGSENNTQLNHVFKICILFISVASLLV
FIFSISCSPIIVEIFSQRGSRVYEIARSGFYIFSFSFIFCGYNIFTSSMFTALSNGKVSAILSFLRTFGF
ITIGLLILPNILNINGIWLAVPSAEILTLFLTIFCICKYKNRYKYM
>gi|260688547|ref|YP_003219681.1| ABC transporter, permease protein [Clostridium difficile R20291]
MKKNLKIIFMLLKMKLSKMMVFRFDFFGAFFVDSSLFILQLLMFNSIYSHVDSIGGWQQGEMLIFIGTFS
LINAINMTIFFFGIYDIPRKIQEGELDYYITKPLDPLFRLTFENINIGSSPLILASILIVLYGISKLNSE
ITLVMIIIYIFMVLLMTLLFYDVCIILRTVSFFVISSSAIMRLEDNLLPMNMKIPGVIYEGVFKVLFYLI
LPYGIMSTIPTQILAGTITINGLIYSILIVFLFTLFMWRFWKLGMRHYKSASS
>gi|260688548|ref|YP_003219682.1| ABC transporter, permease protein [Clostridium difficile R20291]
MSIMSNYNEASSNYSMFYKFKQSIRRYYEVAKINFKVQLIWRFDVVVNMVFTIVKILFAYILWKAIFGEN
KIVSGFTFNSMLSYYIISSFLAGIDMSKSTSEEICNRVKLGTFSKYMIIPINVQNYFIAKNFGMTCFYFV
FNMISAFVWIFIFKIDFAFTSNPVQILISILMIFLGFIFMMKLHFFIGILSFKFLEISFFRMIIENIVEF
ITGTMIPLVLLPETIVTVMKVFPFYYTTYLPSMLLIGRNSNEAIQGLIILALWVLFFSVVNKVMYKRMRT
LFDGVGI
>gi|260688549|ref|YP_003219683.1| ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MEVVKMSIIELNELTKSYRRFEKKAGFMGSVKSLFNRKYTEKTAISSFDLKIEEGEFVGLIGQNGAGKTT
LIKMLTGIIAPSSGEISVMGYYPNKLENNFKKQYAVVMGQKSQLFFELTPADTFLLFKELYDISNEEYKK
NLDYFIELFEVSDYLNVQVRTLSLGERMKMELIVALLHNPKILFLDEPTIGLDAIAQKQIRYFLKEVNET
KGTTIILTSHYMEDIKSLCSRSIVVENSRKIYDGSTEKLFNHFQKYKKITVSFSNETNIVFPKDCKVVEQ
TNHKTSVIVLKERGNETIKWIFDKYDVKDVMIEEEDIGSIVERIYKKGSDEYYEQL
>gi|260688550|ref|YP_003219684.1| putative signaling protein [Clostridium difficile R20291]
MENNTIQKQLRDLSKKIWHIYILNPEEENLKFIISLLDNNLALIGTGKHEFYETLEEFIIGLEKDQTESE
QIDFEIIDEWYSCTKVTDEAFIVYGTLWVIEKDYLEKDIYVEMDTRFTMVYRVTDDMIKLIHVHHSIPNF
DQMKDEYYPKTITEKAQEALAMANEFKLKSEKDLMTGLYNRHFFEVHIKEMLKTVSYGYFYIFDLDNFKQ
VNDIFGHVRGDEILIQFSNILTKVFVNDAIIGRLGGDEFAVFEYSNQSKENVENKAKKVLELCLESNSCS
IGISKLENKSDTFQSLYKQSDYALYYSKRNNKGNFSWF
>gi|260688551|ref|YP_003219685.1| putative exported protein precursor [Clostridium difficile R20291]
MEGLGFYAAALSGSSYQRIGFGKLDPIEVIADGDWISYKQAQDTLTVIRNFLNSFDWRNASEMERANRAA
KLVTEAKYVDSKYCNIVYGNLVDKRGVCGSFASSFHLLTRLMGMDSLSILNPSLNHAWNYIQIDGKWYRS
DGSEISAFGGALDFDYRKLKDATREMTTYYDAKALSILGFNQ
>gi|260688552|ref|YP_003219686.1| hypothetical protein CDR20291_3211 [Clostridium difficile R20291]
MKISSQYRSQYSFRHESNINNTRINESMVKKNETVGKDTYLSNIMKQKQELNDRIRDLKYRQEVYTKKIN
EAIKNLYKSEIRETTNNFSNIEIGIKNSIIEDKNKSTMLDENSTYLNTNDEKESLITKESNEKIEEEILN
DEKLEELEQKKDYKEDSNKKEKVSEDLSLVGKTREELENMLKNFINLTQEEIMKLESRIEKLDKDAEEYK
QNSKTNIFDKTDEQKKHINVLI
>gi|260688553|ref|YP_003219687.1| putative GTPase [Clostridium difficile R20291]
MNGMKQINLQDYGLNRNFITQSMEYHDLYLARIISQEKNFYQAVCVNGVLFAEVSGKLRFEATIQSDFPT
VGDFVMLDRCNNKNGNAIIHHVLHRKSLFVRKAAGKVNEEQVVAANIDIVFLCMSLNKDFNIHRLERYLS
LTWESGAIPVVVLTKSDLCDNVHRKLQVVNSIALGVDVVVTSSIEPDGYKQISKYIKSGCTVALLGSSGV
GKSSLINCLLGGEFLNTKEIRIDDDKGRHATTRRELFLISGGGIVIDTPGMRELGMWDVSEGLDKSFADI
EAYFGKCHFRNCTHTSEPGCAIWEAIAHQELSPKRWESYRRLKTEAVFADNKSEYLAKKEKKFKNISKIN
KTIRR
>gi|260688554|ref|YP_003219688.1| hypothetical protein CDR20291_3213 [Clostridium difficile R20291]
MNYKNRKRAYYQENSCMDNFICKNCGCLVVPEGAGTQHRNHCPHCLHSLHVDIIPGDRAADCDANMEPIG
VWVRKNGEWAIIHRCTRCGHLSSNRIAADDNSVKLMSIALKPLAQPPFPLERIIEKLEKEETE
>gi|260688555|ref|YP_003219689.1| hypothetical protein CDR20291_3214 [Clostridium difficile R20291]
MFQESIPITTKTILEDMPSNDELNHVFSKGCERKMKKRKIVLITLLLIGVLLLGSILYNLFLVKAANISM
LKESWNFDIPIPNKEIEVFDTQDSINGDGQSYFIQGFSEKNFKKVFNLKGGIVVSKDNINEIEKYIDKFK
RDSVNINKSNKNKIEEDFKKYKLEVKKDDKYIYKRNYENYVVLIIKKDEQKLYSLIWNQ
>gi|260688556|ref|YP_003219690.1| putative RNA methyltransferase [Clostridium difficile R20291]
MLSKNEMYIVDIVDIGQGGVGVGKYNGITVFVEGGLIHDKVKVRINKVKKNYAEGDIVEIIEKSPFRVKR
VCSDNLRDCGGCQIQDLDYNKQLEMKTNEVKQVLSRIGKLEDVEVHDTIGMDNPYRYRNKAQFPIQKNNG
IPIIGFYKKKTHDVISTEKCVIQHEINDKIVKIIKTYIRAYKVSIYDEKTHTGLIRHLVTKIGFTTKEVM
VVLVANGNKLPYLKELASVLKENIPGFKTLVVNVNQKDTNAILGRENIVIYGDGKINDYIGDLVFEISPL
SFFQVNPVQTKVLYDKALEYANLNDTDTVFDIYCGIGTISLFLAQKAKKVYGIEIIDDAIKDAKINAKLN
NIHNAEFYVGKAEEIVPKMYREGKTANVVVVDPPRKGCDEKVLETIVSMNPERIVYVSCNPSTLARDLDY
LNVHGFKCVEAQPVDMFPHSTHVETVAKIIKQ
>gi|260688557|ref|YP_003219691.1| pyruvate kinase [Clostridium difficile R20291]
MLNNVKKTKIVCTLGPASQSEEILTQLMQNGLNVCRFNFSHGSHEEHKERIDMAKKVREKLNKPVAILLD
TKGPEIRTGNFEDPEVFLEEGQKFTITMKDIMGTKEMCTVSYKGLAEDVKSGDSILIDDGLVGLRVKEIN
GEDIVCVVENSGIVKNHKGVNVPGVKINLPAITPKDISDIEFGISQGIDYIAASFVRKASDVLAIREVLE
NNNATDIQIISKIENQEGVENLDEILKVSDGIMVARGDLGVEIPTEEMPIVQKMMIKKCNELAKPVVTAT
QMLDSMIRNPRPTRAEVTDVANAIYDGTDAIMLSGETAAGKYPVEAVKMMATIAKRTEETLDYDRLLKEN
GTNNVTVTDAISHATCTTAVDLNASAIITSTSSGYTARMVSKFRPKSPIIATTNNEKTMNKLALTWGVYP
VKSSVAGNTDEVIEKAIEAARQADYIDNGELVVITAGVPVGVSGTTNLIKVHVISEEIVQGIGVGTQTVE
GKVRIIKNGNACVDFNEGDILVSTATDAEMNNYIEKAGAVVTENGGMTSHTAIVGINLDIPVIVSATDIT
NLVKDGEVVTVDASRGVVYRGSTRVL
>gi|260688558|ref|YP_003219692.1| 6-phosphofructokinase [Clostridium difficile R20291]
MKTIGLLTSGGDAPGMNAAIRAVVRSAIYYGCKVYGINRGYKGLLEEDLTEMNLSSVGDIIHRGGTILKS
SRCEEFKTEEGRLKAVKILKKYKIDCLVVIGGDGSFAGAQKLSDLGFPAIGIPGTIDNDLAYTDYTIGFD
TAMNTIIDAIGKIRDTSSSHERVNIVEVMGRHCGDLALYAGLAGGAETIIVPEVEITVDEVALRLKTTQK
RGKRHSIIVLAEGVGSASDLEKELKKESGADLRVTVLGHVQRGGSPTVSDRILASRLGVRAVELLLDGKS
ARVVGIKENKIIDLEISEALAQKKVFDKEAYEMAKILSI
>gi|260688559|ref|YP_003219693.1| DNA polymerase III alpha subunit [Clostridium difficile R20291]
MNKDFAHLHVHTEYSLLDGFSRVKKLIKRAKELNMSSIAITDHGCMFGVIDFYKTAIKEGIKPIIGCEVY
TAARGLRDKDPNYDKYQGHLVLLAKNMEGYKNLIKIVSTSYVEGFYYKPRVDMEELKKHNKGIIALSACL
AGDVARALMNRNYEKAKQFALDYRDIFGEENFFLEIQDHNLPEQKEVNSGLVKLSKETGIPLVATNDVHY
VNKEDSKIHDVLMCIQMGKTLNDPNRMRFGSDEFYLKSREEMEELFPYALEAIDNTVKIADMCNVEFDFN
TIHLPKYDVPEGYTPETYLRELCFNGLKERYDNPSNEILERLNYELDVIEKMGYVEYFLIVWDFINFSKE
NNIIVGPGRGSAAGSIVAYTLKITDIDPIKYSLLFERFLNPERISMPDIDIDFCYERREEVIDYVKRKYG
DDHVAQIITFGTMGAKAAIRDVGRVLDIGYNKVDKVAKEIPFALGMTIDKALDTNPNLKELYDQDPETKE
IINISKQIEGMLRHASTHAAGVVISKNPVDEYVPLYKHQDAITTQFTMTTLEELGLLKMDFLGLRTLTVI
RDTLDLIEKNRVIKNYTEKIDFSKMDYDDPKVYEMLSSGNTLGVFQLESAGMRSFMKQLKPDNFEDIVAG
ISLFRPGPMDSIPAYIKNKSNPKDVTYLHEKLKPIMEVTYGCLVYQEQVMQVVRDLGGYSYGRSDLVRRA
MSKKKMDVMEEERQYFIHGKFDEDGNIEIAGCIRNGVEEEIANKIFDDMIDFARYAFNKSHAAAYGVLAY
ETAYLKTYYPVEFMAALITSVMGNTDKVVEYIRECKALEIDVLPPDINKSFSKFSVEGDNIRFGLAAVKN
VGVNIINNIIAERESNGLFVDLVDLVKRLDQKDTNKRVIESLIKCGAFDNISENRASLMAGYESLLESVS
MDRKKNVQGQISLFDAFGDSEEDSDFQQIYSLPKRQEYEERERLNLEKEVLGMYVSGHPLSQFEKELQEK
TSMDNGKLNSLKEEEESYLQMNETDVIMGGMIVTKTIKTTKRNEIMAFIELEDLYGAIEIIVFPQLLQKY
NVILNEDNIIYVKGTLSIKEGENAKLIAREIKDINDDTDFADRNYNSGRTRNVENIKPESGKKLYLKIDS
MSDTDTTNNIVEIAKQYPGNDSIYLYPMDENINGKRKAYKMTGALTCICDEFINNLEELLPKDNIKVKA
>gi|260688560|ref|YP_003219694.1| hypothetical protein CDR20291_3219 [Clostridium difficile R20291]
MSFSTETKNELARVISGNECCNIAELSALVKSGGSIQIVGYKKLNLKITTELNSIARKVFKLLKKNFNIN
TTISVNKNQMLKRNNSYVLMVTSEMGSEMLLKKLGILEDKEGFFTINKISENLIKHEGCKRAFIRGAFLG
GGSISDPEKNYHMEFVTNNEEFADSLKELINSLGFNSKIVARKNNHVVYIKESEQISDLLSIIGGHHALL
SLQNTKIVKEMRNNVNRIVNCETANLSKTVNAAVRQVENIKLIQETIGISSLPENLQEIAKIRIEYEDMT
LKELGEMLEPPIGKSGVNHRLRKIEEIATDLKKKS
>gi|260688561|ref|YP_003219695.1| putative DNA repair protein (nucleotide pyrophosphatase) [Clostridium difficile R20291]
MREEVSAGGVVLFGNTILLLRKFNGDWVLPKGKVEEGENNQEAALREVSEETGVKADILKYLGEIHYTFK
ENWDENRAVHKTVFWYLMQAKNMDTIPQKEEGFIDAKFIHLDRVVDLARYDDEKEIIKVALQEIKKRLKK
N
>gi|260688562|ref|YP_003219696.1| hypothetical protein CDR20291_3221 [Clostridium difficile R20291]
MEANMAKLLIIVGILGWIALIVSLFIYKKAKNEKVKLFQRSIVENREPNVVVIGGGTGQSVFLRGLKHTT
QNITAIVTVADDGGGSGVLREDLGMLPPGDIRNCLLALANIEPTMNEVMQYRFTEGLLKGQSFGNLFLAA
MNGLYGNFEKAVYKLSEIFAITGRVLPVTLEDVNLVAKLENGNIINGESSIPEESKIQKSSIDKIFLNPK
DVKPLKDVIASIYDADIIIMGPGSLYTSIIPNLLVEGIVDAIKSSVAPKVYIANIMTQPGETEGYNVLEH
VNAIVKHTDENLIDYVIANNEILPEEMLDLYKQDGAEQVLLDKKQKDKLKEMGIKTVEKNLIEIKNNYIR
HDAKYISNIVIELALNHNYNKS
>gi|260688563|ref|YP_003219697.1| putative ATP-binding protein [Clostridium difficile R20291]
MKFVIVTGLSGSGKSETMRALEDMGFYCVDNLPPALITKFAELCYQPNSSIDKVALGIDIRGRKFFEALH
ESLNYLEKENYEYEMVYLDCNDDVLLKRYKMTRRNHPLAKDMQIPEGIKMERKIMEPLKELSTCIIDTTN
MKPKDLKEEIKKIYSSGEDNPNLTISVVSFGFKHGILADADLVFDVRFLPNPYYVEELRAKTGDDKEVRD
YVMNSKISEEFYVKLLDMIHFLVPQYIDEGKQHLVIGVGCTGGRHRSVTITNLIAEDLSNKGYRVVKKHR
DSMLR
>gi|260688564|ref|YP_003219698.1| putative phosphoesterase [Clostridium difficile R20291]
MKILADYHTHTLYSHGKGTIEDNVKVAISKGIKTIGISDHSYKHIAYGVKKKDILKMREEVDYLNDKYND
INILLGMECNILDDKGNIDMDDKFIRDFDYIMAGYHFGSTPTSLRSLLNHCNNYIFKTEKAKEYNTKAVI
NAISNNDIFIITHPGDKGDVYIEEVAKTAKKTNTRLEINSSHSFLNVNQLNKIKGLENKFIIGSDAHCPE
RVGDFKLAMKTISDSNLDISLVENIII
>gi|260688565|ref|YP_003219699.1| UDP-N-acetylenolpyruvoylglucosamine reductase [Clostridium difficile R20291]
MTAKVQYNLGGNTMNNQDIYINLLNILSKEDIKVDEPMKKHISFRVGGPADILVRPRTEEQLKNVLKLVK
EESIPYLIIGNGSNILIKDGGIRGVVIELADNFNSYEINDTRMTAQSGALLSVLGKALQKQELKGFEFAS
GIPGTLGGALAMNAGAYGGEMKDIVKSVRLMDMEGNIFELSNEQMEFGYRKSIISKNGYIALSAELELQE
GNYDEIKSLMDDLATRRITKQPLNFASAGSTFKRPTGYFAGKLIEETGLRGLTLRGAQVSEKHCGFVVNQ
GEASAKDILDLIYVIKSAVYAKFGVMLEEEVKILGED
>gi|260688566|ref|YP_003219700.1| putative formate/nitrite transporter [Clostridium difficile R20291]
MLLYNYCHKKTRESIIFKGEGFMSKGFLTPGETAQATISAGIKKANISTQNAILLGLFGGAFIGFGALGS
MIVSQTFGKIDPGVASFLSAMVFPVGLMLVVVAGAELFTGNTLMAIALMDKKITLGKMLRNWGLVYFANL
VGSILLVALVFYSSTLTGDAATKAIAVAEAKVNSTIASMFLKAILCNILVVLAVWMATASQDIMSKLASC
WTVIMLFVLCGFQHSVANMFFIPMGMALGANITMVQFITNLVFVTLGNIVGGSIVVGGIYYLCYVKNS
>gi|260688567|ref|YP_003219701.1| putative cardiolipin synthetase [Clostridium difficile R20291]
MFDISFFEMSIYEIAVTTIYIINFMVILNLIFREKRNINTTLTWLLILVLIPALGFILYIAFGRNISKNN
MFRLKEKDDKIIKSNILDTQVKLQSTSEIDSDIHQHKDMIYALANSNNAHYTNNNDVWIYAESSQFFNSL
LEELKKAKKYINIQFYIFKDDKIGTEIIDILIDKAKEGVEVRLLFDAVGGRTLKNSTLSRLKESGVKVGS
FFPSFLKIVNFNLNYRNHRKIVVIDGKVGFVGGYNVGDEYLGRNPKFGLWRDTHTKLTGDCVIDLNMRFI
LDWRYTTKEDLDLEKYFIEEDTNSNHPSENIGIQIVSSGPDISELDEIKYGYLKMIQKARKYIYIQSPYL
ILDSTFIDTLKIACLSGVDVRVMIPSKPDHPFVYWASYSYAGELLKFGAKIYTYGQNAFLHAKTIVIDDS
ICSIGTANMDIRSFELNFEVNAFMYSSKKALEQRIIFENDILNSKEITLDIYNSRSTYIKIKESISRLLS
AVL
>gi|260688568|ref|YP_003219702.1| putative iron-only hydrogenase, electron-transferring subunit [Clostridium difficile R20291]
MCDFISHNKQLFDELDIFIDSLTTKEGALIQVLHEAQGIFGYLPKEVQLHVARKLGVAPAKVYGVVTFYS
YFTTEPVGKYKISVCLGTVCFVKGADKILSAFEKQLGIKVGETTSDFKFSLEGLRCLGACGLAPVVTVNG
KVYGKVKPDQVSEILDTYRELELNC
>gi|260688569|ref|YP_003219703.1| putative iron-only hydrogenase, electron-transferring subunit [Clostridium difficile R20291]
MRKVNSFDELKVLADELKPNLSLRKNYSKENVLRRELLVCCDTGCTSSNSLEIVSELENEIKKSGIQDKV
SVRLTGCFGFCAQGPIVKVYPDNVFYVKVEPSDAEKIVQSHLIRNTVVEELLYEEESLSKKVEEQEEMSF
YKKQLRIALKNCGLIDPDSIEEYIANDGYLALGKCLTSLTPQEVIAEVKTSGLRGRGGAGFPTGSKWEAA
SKNPAGPTDKKFVVCNADEGDPGAFMDRSVLEGDPHSVLEAMAICGYAIGSDTGYIYIRAEYPKSIERLK
VAIAQAEKYGLLGENILGTGFNFKLELKYGAGAFVCGEGTALMHSIEGRRGEPRMKTYSSSKSGLWKSPT
CLNNVETFANIPAIILKGGDWFANLGTEDSSGTKVFALGGKVENVGLVEVPMGTTLRDIVFEIGGGIPEG
KKFKAVQTGGPSGGCIPTEHLDTPIDFGSLSSIGSMMGSGGMLVLDESDCMVDIAKFFLEFTVEESCGKC
TPCRIGTTRLLEILTKITEGNGTLQDLDDLENLAETIQTASLCGLGKAAPNPVLSTLQYFKDEYIAHVVD
KKCPAGKCQNLLSYFITDDCKGCTKCSRVCPAGCITGSVKEQHTIDTSKCLKCGACIDNCTFNAIIKK
>gi|260688570|ref|YP_003219704.1| putative iron-only hydrogenase, catalytic subunit [Clostridium difficile R20291]
MSLVNLTINGKHVSAPSGTSILDAAKLINIKIHNLCHLHMNEIDKLDTCASCRICMVETERGLVPACGTV
IKEGMKVQTNSAKALNARRTIVELLLSDHPQDCFVCEKNGDCELQTIAADLGVRKIRYQGSKSFAGKDTS
TKSLVKDHSKCILCRRCETVCNDIQTVGALSGVNRGFNTLVSTFFNSDMVETECTFCGQCISVCPTGALT
EVDNVPKLWDVLNKKEKTIVVQVAPAVRVAIGEEFGLEPGSISTGKMVAALKALGFEHVFDTNFGADFTI
MEEATEFIERIQKGENLPILTSCCPAWVNFLEHNYPDKLNLASSCKSPQGMFGSIAKNYYAPKILGINPE
ELYVVSVMPCVAKKYEASREELSESGILDVDLSITTRELAKMIKEAAIDLPNLQDQDFDNPLGKSTGAAS
IFGASGGVLEAALRTSYEKITNKTLDNVNFTNVRGLKGIREASIDVDGTTVNVCIVNTLKNARKIMDKVR
SGECKYHIIEVMACPGGCVGGAGQPYHHGNTEIVDRRANALYEIDRNKAIRKSHENPDLQAIYKDFFGEP
NSDVAHKYLHTHYFDKSCVYGECPQECACEEAK
>gi|260688571|ref|YP_003219705.1| putative DNA mismatch repair protein [Clostridium difficile R20291]
MGIEYFSKLLESSTEKELLLSKKSNNISTARLISFLIVIAGFAIGFYNKNIVGIFVGVLSIIIFIALLVI
HSKVKEEETYFKSKSEVLNKYIKRFGDGWKEFKIDGKEYLKDENSQAKDLDLFGRASLYQYICVANTSYG
KNFLAKYLWNENPDENVILERQRAIKELLSKDDFSIHIQILSNIIGKEQKNNSDSSIESFIEYGENKNVY
IPKWMHIFTWGLPTATILSFIFCMLGFLPVLPVFLLFIIQLGFSGFGYPRLMQTLSPLFSFSRSIQVYEK
MFEVLEKETFESAYLKELQDKLSKGSGVSRGVKQLNSIGNAVNLRYNQILYIIACGVLMWNYHCAEALER
WKGIYGNQIRDWFESIGEFEALISLTVISHVKENTCFPVIKYEDTPRLKVEEVYHPLIAEKSVIANSIQL
NSQTCIITGSNMSGKTTFLRSIGVNLVLAYAGAPVCAKSFDATCMAIFTSMRIQDDVSQGISTFYAEILR
IKSMIQYSLKELPMLVLVDEIFKGTNSADRIIGASEAVKKLSKPWVISMVTTHDFELCDLSGSGDVEVVN
YHFSEYYVDDKIHFDYKIKDGRCKTTNAKQLMRMAGIL
>gi|260688572|ref|YP_003219706.1| HPr(Ser) kinase/phosphorylase [Clostridium difficile R20291]
METSNKVSIREIIKELKLKVVYMPDDVDYYVYSQDINRPGLQFAGYFDYFAYERIQIVGKTEYNFFGLMD
SHIREEVLDRFFSYEIPALIISRDLEIKPDVIEKAKKYKRILLSTNRNTTRLINRLSNYLDNKLAPHTTI
HGVLVDIYGIGVLIKGESSIGKSETALELIQRGNRLVADDAVEIRKLDESMLVGQSPELIRHFLEIRGIG
IIDVRSLYGVGAIKNSKMIDLVVHLEAWDETKYYDRLGLDKEYEEILGVNVEKLVVPVKPGRNTAMILEV
AAMNFRQRGMGYDAAQEFTKKLSKLIDTK
>gi|260688573|ref|YP_003219707.1| excinuclease ABC subunit C [Clostridium difficile R20291]
MFDIQEHLKKLPSEPGVYLMKDKYDHIIYVGKAISLKNRVRQYFQSSKNHTSKVKSMVKNIYKFEYIITD
SELEALILECNLIKRYRPKYNVVLRDDKTYPYIKVTTNEDYPRILKVRRVLKDKAKYFGPYTNITAVNDT
LELISSTYPIRSCKIDIDKAIKNKTRPCLNLHINKCLGPCTGNVSKEEYGKMIEEIIMCLSGKEEKLMEL
LKEKMNESSMNFRFEEAAVYRDKIKSLEEMIQKQKIDATVSDLNQDVVAMARAHNEACVQVFFIRNGKIV
GREHFILEGVMDSPRASILSSFVKQFYNEQEYIPKELIIEDEIEDSSILEEWLSSKKGQKVTIRVPQKGE
KKSLVEMVRKNAVEYLEKFSDMNKRKYEKSIGALEELKQILNLEKLPIRIEAYDISNIQGVDSIGSMVVY
TNAKKDKKEYRRYKIKTVIGPNDYDSMAEIVDRRLKHGNLPDLILLDGGKGQVSAVKKVLELNDVDIPLW
GMYKDDKHRTKGLICKEKEIELDKTTNLYRFIASIQEEVHNYAITYHRSLRNKALTKSILDDIQGIGEKR
KKSLLNHFKDVEAIKKATMEELLEVDGMNKSIADNVYNFFRKEEN
>gi|260688574|ref|YP_003219708.1| excinuclease ABC subunit A [Clostridium difficile R20291]
MEDKIIIRGAKEHNLKNIDLELPRDKFIVFTGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLGQME
KPNVEYIEGLSPAISIDQKTTSKNPRSTVGTVTEIYDYLRLLFARVGDVYCPTCGEKISQMTIQEIVDKM
LDFPDRTKLQILSPIVRGQKGTHKKVFDNIKKEGFVRVRVNGENYEVSDDIILNKNQKHNIEVVVDRIVI
KDGIESRLADSIETAVKLSDGLVIAQIIDGEEILFSTKFACPEHGIGIEELSPRMFSFNAPFGACDVCNG
LGESKEVDPELVVPNKDLSIKQGAVAAWGSTGVNDDTYYSKMIKSLAEHFNVSLTTPFKDLPDDFVEELL
YGKDNIIVEFTYESKFGGTRNYKSYFEGVIVNLERRYRETNSDYMRDKIEEYMAERPCPKCKGMRLKKEV
LSVLVDGKNIMEVTNLSVNELIDFMENINLTEKQRFIAHEIIKEIKGRAMFLRDVGLDYLNLSRKAGTLS
GGEAQRIRLATQIGSALVGVLYVLDEPSIGLHQRDNDRLITTLRHLTDLGNTLIVVEHDEDTMREADYVI
DIGPGAGIHGGEIVAQGTLDEIIENENSITGQYLSGKKQILLPETTREGNGSFIEIVKASENNLKNIDVK
FPLGKFTCITGVSGSGKSTLINDILYKGVASKVNRLKQRAGKHKEIKGIESIDKVINIDQSPIGRTPRSN
PATYTGVFDFIRDIFASTNEAKARGYKKGRFSFNVKGGRCEACKGDGIIKIEMHFLPDVYVPCEICKGER
YNRETLQVKYKDKTISDILDMNVEEAVEFFENIPNIKRKLETLMDVGLSYIKLGQPSTQLSGGEAQRIKL
AAELSKRPTGKTLYILDEPTTGLHMADVDKLIQVLQRLADTGNTIIVIEHNLDVIKTCDYVIDLGPEGGD
KGGTIVATGTPKEVSKVDGSYTGQFLKKYFS
>gi|260688575|ref|YP_003219709.1| excinuclease ABC subunit B [Clostridium difficile R20291]
MFEKRSDTMDFKIKSDFKPTGDQPEAIKSIVDSINRNEKFSTLLGVTGSGKTFTMANIIQQVKKPTLIMA
HNKTLAAQLYSEFKEFFPDNAVEYFVSYYDYYQPEAYVAHSDTYIEKDASINDEIDKLRHSATASILERR
DTIIISSVSCIYGLGDPKDYKELMLSIRPGMQRDRDDVIKRLIEIQYERNDINFTRGTFRVRGDILEIFP
ASNDEKAIRIEFFGDEVDRITEIDYVTGKIVGTRNHVVIFPASHYVTTPERIEKAIVEIENELQEQIKFF
KENDRLLEAQRIEQRTKYDIEMLKEIGFCQGIENYSRHITGRSEGERPYTLMDFFPDDYLIIVDEAHVTI
PQVRGMYAGDRSRKTSLIENGFRLPSALDNRPLNFQEFEGNINQMLFVSATPGPYEIQHSETIAEQIIRP
TGLLDPIVEVRPINNQIDDLVGEITKTIEKNERVLITTLTKKMSEDLTNYLKEIGIKVKYLHSDIVTLER
TEIIRDLRLGKFDVLVGINLLREGLDIPEVSLIAILDADKEGFLRSETALIQTIGRAARNENGRVIMYAD
RITDSMQNAIDETKRRRDIQNLYNEEHNIIPKTIQKNIRDSIEATKVAEEEVVYGISDTDDKDEIRANID
KLKSEMMEAAQNLQFERAAELRDKVKQLEEKLEK
>gi|260688576|ref|YP_003219710.1| putative nucleotide pyrophosphatase [Clostridium difficile R20291]
MTKVIVLSVDSLFEKDLEFVKNLPNFKSILENCSIVKNINCVYPTLTYPCHTSMVTGVYPKKHGIYHNEK
FDPNKENKDWYWYSKDIKVKTIIDVAKENNLTTSSVLWPVMGANPNIDYNIAEIWAPSREDDPRETFERS
SSKVIMDGIYNRHCHYIDWKLEPNMDLFGVNCSVDIIKEYKPDLMLIHLATLDHTRHNYGLFNDEVDKAL
KMNDKWLGDIIQATKDAGTYKDTNFIILGDHGHLRVDKVINPNVLLKSNGFIKVENGEVKDFDAYVNSSG
ISAQIIVNNLDRLTELRELLEEFKEELFIENIFTKEEASNLGLEGDFEMVIEGLEGISFGNDFEGSIIKD
SDIKDYKFAVATHGHLPTKGNRPPFIAFGPNIKGGVVIEEGDLRAHAATILKMFDLKLDGVEKEAFDFIM
>gi|260688577|ref|YP_003219711.1| ABC transporter, solute-binding protein [Clostridium difficile R20291]
MKMKLKRKLATGLAITLLLGSLVGCSNSNDANASKGEKTDSNITKIDFWAPLGGTNGETAQKMVDQFNSE
HKDVQVNMLKQKDYYENATKLQAALTSKDQPDVTLLEITQTGTFASAGALVDMSKYFDKTYQERFFSGLL
TNSYYEDKFVGMPFNRSTPILYINRDMATKAGLDPSGPKSWEELKDYASKMTNKSEDTYGFETPIDIWFY
EAMVMQSGGEITNGKKVAFNNEAGQAPVKFWQDMMKAGIMKMPPGEDYNAWDVAKQDFVNGKVGMIFTST
ADLAGLMQQTEGKFEISTAFLPKNQKYATPTGGANLVMLEGGTDKEKEASAEFIEWMTQTDKIVQFSSST
GYLPTTEDATNSEKLQTLYKEKPQYKVATDQLQYAVALPMLNGYKEATDKLMDEIKKGLTDLNANPKDVV
SKGTSAMQAVIDKTNK
>gi|260688578|ref|YP_003219712.1| ABC transporter, permease protein [Clostridium difficile R20291]
MDIIQPIKKDKVDIKKIASKSMEILILLLLSAIFIFPFIWMLSTSFKNPQEMMQLPPTIIPNDIVLENYS
TAWHSGPFFRYLLNSVFVTGSVLILQFLVMVPAAYAFSKIKFKGEKMLFGLLLVGLMIPPQVTFLPVYMM
MSKFGFINTYIPLIIPFMTSSFGIFLLRQNFMQISDETIEAAKLDNASDLKIMFRIMVPMAKPAVITFIL
FNFIYHWNNYFWPLVMTNTDAIRTLPIGVALLKSSEGITAWNVIMAGNIILILPIILVYIFANKKVKEAF
MYSGIK
>gi|260688579|ref|YP_003219713.1| ABC transporter, permease protein [Clostridium difficile R20291]
MKKQFNKAYLYITPAIIGTLLFIVYPIIKTISLSFKSGSLLSSTFENVGLNNYTELLKNPEFIQTITNTA
IYTFFMVTISISLAIVLAVWLNKNSIIHNLTQSIIFTPHVISLVSVAVLWLWIMEPQYGFLNWILSTLHL
PTSKWLSSESSALMSLILIGIWKTLGYNILIVLSGLKSIPNYIYEASKLDNANKITNFFKVTLPLLSPTI
FFLMITTTTASFQVFDEISIMTQGGPVGSTNMLSYYIYESGFIYYDIGQASAASMFLLAIVMIATYANFR
LLSKKVHYQ
>gi|260688580|ref|YP_003219714.1| ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MADIRLENVTKSYNKKNTVIENLNLTIEDGSFTVLVGPSGCGKSTTLRMIAGLEDITSGKLKIEENDVTK
TDASKRDIAMVFQNYALYPHMTVRENIEFGLKNKKVEKEKREKLITEVIDVVGLREYLNVKPGNLSGGQR
QRVALARAMVKNPKVFLMDEPLSNLDAKLRNQMRTELIQLHQKLKSTFVYVTHDQVEAMSMADKIVIMNK
GKIMQIGSPKKIYQNPKNLFVAQFIGSPCMNILDIKNDIKFGFRPEKATLESINIDGKNDDVFSLFGKVV
TKEVLGNETIYCLSVLNREIRVKTENDIFDIGRTLRISVLEKDLYYFDKNGERIEDVKVCKSMYSKIKGD
IYEKAI
>gi|260688581|ref|YP_003219715.1| putative siroheme synthase [Clostridium difficile R20291]
MLYPINLKLDELDVVIIGGGEVAYRKCKNFLEFNKNVTIVSKQILNKFYDLKGNIKIIKDDYKEIYIKDA
SVIIAATNNRELNMEIGLYCRAKNKLVNVVDNIEISNFTVPSYIKRGDLLISVSTGGKSPSLSSKIKKEI
EERYTEDYEEYLNVLGDIRKKVIKKYEDKSKRKDVLNMLVTLDLEELKKFDI
>gi|260688582|ref|YP_003219716.1| delta-aminolevulinic acid dehydratase [Clostridium difficile R20291]
MLRRPRRLRASKAIRNLVRETKVNVEDLIYPLFVVEGENIKEEINSLPDVYHLSIDMLEDEIKEISELGI
EHIMLFGVPDEKDECASQAFNDNGIVQKAIRKVKEINSDINVITDVCMCQYTSHGHCGILTDTGYVDNDK
SLEYLAKISVSHAKAGADMVAPSDMMDGRIQAIREALDENGLENVGIMAYSVKYASNYYGPFREAAHSAP
SFGDRKTYQMDPANSNEAIIETELDILEGADILMVKPALSYLDIIRRVKDNFDLPLAAYNVSGEYSMLKF
AVKEGLLNEDVILESITSIKRAGADIIITYFAKDIAKLLKK
>gi|260688583|ref|YP_003219717.1| porphyrin biosynthesis protein includes: uroporphyrinogen-III methyltransferase and uroporphyrinogen-III synthase] [Clostridium difficile R20291]
MKGKVYLVGAGPGDYKLMTLKGLECIRKSDVIVYDRLANSSYLREAKPDCELIYVGKASSNHILPQEDIN
RIIAEKAKEGKIVTRLKGGDPYVFGRGGEEAETLVDEDIEFEVVPGITSAIGGLCYAGIPITHRDHASSF
HVITGHLKGDDSGELNWNALANNKGTLVFLMGISNLEKISENLMKEGKDKDTPVALISWATRYNQRVVTS
TLENVYETAIKEEVKPPTLIVVGSVVGLREKLNFFESKPLFGKSIAVTRSRNQNSVLVEKIMDLGGNPIE
IPTIKVEKIQNNINLENEIKNINKYNYLILTSKNAVEIFFEKIYEMNFDLRILSNLKVCAIGSATSNELK
KRGIIADIVPKKFVAESLYEELAPILNDNDNILIPRAENARDYLVDKLKAICEVTEVHIYRTVIDEDKKG
EILDILNSNDIDYITFTSSSTVNNLVEIIGKENIKILEKIKTLSIGPITTETINSLGIKLYKESATSTID
SLVDLIIKN
>gi|260688584|ref|YP_003219718.1| porphobilinogen deaminase [Clostridium difficile R20291]
MNIVVGTRGSTLALIQTEWVINELKKKYPEISFEIKIIKTKGDLIQNVSLDKIGDKGLFVKEIEQQLLDG
KIDIAVHSMKDMPSYLADGLKFAHTPKREDPRDVLILREGYKNLDDLPHGAVIGTGSKRRKFQLLKQRPD
LNIVQVRGNVETRIRKIKDENMHGIVLAASGIIRANLQDKISSYLPVDVVIPAPAQGALAIEIRSNDSTI
EGIVNSLKDENTEIQILAERGFLDGVNGSCHIPMAAYCEIIQDKIHLTGLYGDSEGKKVVIKSIDGDISS
PRELGLKLAKLVLKEYENYEG
>gi|260688585|ref|YP_003219719.1| sirohydrochlorin cobaltochelatase [Clostridium difficile R20291]
MKKALLVVSFGTSYHETREKTIDICEDKIKNSLKSHDFFRAYTSNMIINKIKKRDGIEIDNPIQALDKIY
EQGYDEVIIQTLHIICGEEFNKLKEQVDGYSSKFKKIVLGRPLLTHIEDYQEAVEAIKHQIPHMESNEAV
VFMGHGTLHESHSAYPALEYMLRDNGINAYVGTVEGYPEIEHVIRRLKEGNIKTVNLMPFMLVAGDHAIN
DMAGDEEDSWKTILEEDGFDVRVHLKGLGENSYIQDKFVRHAVKCAENAKFYGIGAGPGDGSLLTIKAVN
TLKKLDILYTPESKKGGDSLALSIVSEYLPESVEIKSRHFPMSFDGNEKSLAWDNVAQEIISDVNDGKNV
GFVTLGDPMIYSTYVYIMKRILGEVEVETIPGISSFSNIASNQNFPLVMDKEALVVIPCTMEDDKIEYAL
QNYNSIVLMKVYKNFKEIIKKLEKYDLIEHAILVSNSSQESENVFTDLKEAHLEDKISYFSTILVNKDNK
IK
>gi|260688586|ref|YP_003219720.1| cobalt-precorrin-6a reductase [Clostridium difficile R20291]
MILILGGTSDSLSICDKINELKNQPYILSVTTDYGRELAQQHAENVILGKLGKEDMLKFIKDNNIVKIID
ATHPYAVEVSKTAITCAKLLNIDYIRFERKSLIEEIDYDNKFIVDTIEEACEIANKIGTNIFIGTGSKNL
NRFIEEISDKNLVVRVLPTSEVILSCEKLGLSADNIVAMKGPFSQYINEETYKHYNIDLVITKESGIAGG
FLEKVNACKTFNIPVIIIKRESINYENVFNDINKIKDILV
>gi|260688587|ref|YP_003219721.1| cobalt-precorrin-3b c(17)-methyltransferase [Clostridium difficile R20291]
MIYVVGIGPGSKDTMTLEAIKAIEDSEAIVGYKTYIKLIEEFIQGKEIIQNGMRQEVDRCKQAVEEAKKG
KKVAVVSSGDAGIYGMAGLILELISKEDEDIKVKVIPGVTASIGAAAILGAPIMHDFCHISLSDLMTPWE
VIEKRLRLAAEADFVICLYNPRSKGRSEHLSKAFKIMGEFKGGDTPVGVVKDVGREKEEKFVCTFENMDF
EKVDMTTMVIIGNKSTYINGELMITPRGYTV
>gi|260688588|ref|YP_003219722.1| putative cobalamin biosynthesis protein [Clostridium difficile R20291]
MNIEGNIAIICITENGKNLAVKINSLVNNCVIYQVKNKKSNLVVEETCVHTVQKKLSDFVGEIFSKFDYI
IFIMATGIVVRSIAPYIISKFSDPAILVMDEKGKNVISLLSGHIGGANSLTQYISSLIDANPVITTATDI
NQKASLDMIAKKLNAHIDNFRESVKEVNSMLVNNKCVGLYVDEGYQVDTRGFKLIESKDELRDSFSNTYI
EKLVVVSNKINCIEDIENLNLDNKFEHCYSTKKIIKVIPRDIVIGIGCRRNTDSELMYNSLEEFLNKQNI
DIRAINTVGSIELKKDEKAIIELSKILKVPFKTFSIDEISKVDNLFDKSDFVKKNVGVYSVAEPIAYLLS
KGNLLVEKHKYKGITFSVGRIKI
>gi|260688589|ref|YP_003219723.1| precorrin-4 C(11)-methyltransferase [Clostridium difficile R20291]
MNKVHFVGAGPGDKELITLKGYKLLSNADVVIYAGSLVNPELLEYCKEDCQIHNSAHMDLQEIIDVMREG
IENNKSVVRLQTGDFSIYGSIREQVEDLNKLNIDYDCTPGVSSFLGAASSLGVEYTVPEISQSVIITRME
GRTPVPEKESIQSYAKHQTSMVIFLSVQEIEKVVSKLLEGGYPKDTPIAVIYKATWADEKIVKGTLSDIA
VKVKENNINKTALIMVGRFLGEEYNNSKLYDKDFKHEYRG
>gi|260688590|ref|YP_003219724.1| putative cobalt-precorrin-6y C(15)-methyltransferase [Clostridium difficile R20291]
MRNSEFITGKVPITKEEVRAISISKLNLVNAKNLIDIGAGTGSVSVEAAYNYPNLKVISIEKNDDAIELI
EKNIKKFNLKNIEVIKGYAPINLGLNVKVESIFLGGTGNNLEEIIEWSKKNLVTGGRLVANFIIIDTFNQ
TLKLLKKHGFKEIDVCVLNVSKLEKLGKGEYFKPLNPIYIISCEKGENDDE
>gi|260688591|ref|YP_003219725.1| putative cobalt-precorrin-6y C(5)-methyltransferase [Clostridium difficile R20291]
MINIIGLGPGNLDYITKKGENLISTSDVLIGGKRNLESIKNFEGEKIVLDSNLREIIEYINNNKEKQISI
IASGDPLIYGIGRYLSKNIDNKMLNVVSGISSLQYIFSKIYVDMNDVYITSSHGKIPDFDYILSHKKVCM
VTDSKIGPKQISREIIDRNLNKIIVVGENLSYDNEKITIAKPEEIIRMDNFDMNVVVILDEE
>gi|260688592|ref|YP_003219726.1| putative cobalt-precorrin-6a synthase [deacetylating] [Clostridium difficile R20291]
MEEYVYIDGKKYRRGYTTGSCATGASKAAVYMLITKNRINTINIDTPKGIPLLLKVDNINISDTFVECSI
KKDGGDDIDATHTMDIYARAEIVAKNDKNKGYLTLKDIDSLSTNSECKSELYKFIRVYGGTGIGVVTKKG
LSVDVGKPAINPTPLKMINHEIRKLIGDNFESILGNDKVLKITIFAPQGETVAKKTFNPRLGIVGGISII
GTTGIVEPMSDEGWKKSLSIELQMKKEQGLDKIILVPGNHGEQFIREKLNLDIKYVVRVSNFIGYMIKEA
QRIGYKKILMAGHIGKFIKVSAGIFNTHSKVADARSEILVANLALMGARYEFLNKINQCVTTEEAVELIN
NSEYREVYNILSNKCKERVKQYLNEDSDDIDVEVIIFSMDKSLLGKSDNTDDLVEVFI
>gi|260688593|ref|YP_003219727.1| cobalt-precorrin-8x methylmutase [Clostridium difficile R20291]
MEYIKNPMKIEEKSFELIQEIIDEIRPDYKFKNNIEEKIIKRAIHTTADFDYLDILKISEEAVDSIIDAL
KNNASIYTDTNMALSGINKRKLESLGCKYKCLVADDETVKLAKEKGITRSMAAVEIAAKEEGRKIFVLGN
APTALYKVMEMKSEGRLDLDAVIGVPVGFVGAQESKDEVEKTDIPYIISKGRKGGSNLAAAIVNAILYTM
>gi|260688594|ref|YP_003219728.1| putative cobalamin biosynthesis kinase [Clostridium difficile R20291]
MKSYGICPASCGEFVQGIIDDEEYLCSYAIDMYSEVYIEEKLVDINLGRYKSRLAIEKVFEKFNLPKKYT
KNISLNINSKIPVGKGMASSTADIGATIKATLSLIDKDLSSEEISKLAAEIEPTDSIFIDKNSIFNPLNG
TVIKYLGNLTNAKVIILEPNKVLDTMKIRLRQDYNKLKVENKEVIKKSFALLEEGLKKNNLSLVGEACTL
SSLANENIEKKEYLNEIIKISKKYGAYGVNIAHSGTVVGILIDKSMNDKKMIDTLCESNINSVYNKIYTQ
NIINGGIKGEIEWNT
>gi|260688595|ref|YP_003219729.1| pthreonine-phosphate decarboxylase [Clostridium difficile R20291]
MKDLGHGANVGEMARLYGKNPKEIIDFSSNINPNVLPNLERYILKGLEECRNYPDINYTNLRENISKYIG
INPDFIIPGNGATEVIYLLMKSVKKKLAIINPTFSEYRRSAELNNLDIIDLELDLENNFKLNIDIIKENI
KRFDSLFICNPNNPSGNVQDLKELVHLLGKHNKVLIIDETFMEFVEDESKYSLVKYIESNKNIFIIKAVT
KFFGMPGLRLGYGLTSNTEIMNKIYEHKEPWTINSFADILSNFIFEDKEYIKNSKEYYIEERKYMLQELR
NIRNIKVYDTDANFILIRAYKKTTKELKKDLLKQGNILVRDASNFIGLDDSFIRVAIKSHEDNKILIENM
KNLLGD
>gi|260688596|ref|YP_003219730.1| cobalamin biosynthesis protein [Clostridium difficile R20291]
MSILSIYIGYVTDLIVGDPYSFPHPVRFIGKLINFTQGIIRKVSKNDRQLKFGGFILWFITVGITYLTTY
AIVKLFSFNILLSIVVNSFIIYTTLATKCLKDEALKIYNVLKTEDIEKSRIQLSYIVGRDTTNLSEPEII
RATVETVAENTVDGIIAPMFYAFIGGAPLAMAYKAINTLDSTVGYKNKKYKDIGFASAKIDDIANYIPAR
ISVILMTIGSFFLNYNYRNCFKISIRDRKNHKSPNCAFSEGAVSGALGIQLGGTNVYFGEKVYKPTIGDK
LREIDKEDIIKTNKIMYVSSFVSMLVFTLIHVLCRMILINLII
>gi|260688597|ref|YP_003219731.1| cobyrinic acid A,C-diamide synthase [Clostridium difficile R20291]
MMTFIYNLGRRCIMKKILIAGTNSGVGKTTISLGIMQALVKRNMKVQPYKVGPDYIDPSYHTFITGRHSR
NLDSYMLDDEKIKYIVNKSSKDADISVIEGVMGLYDGFGIDLDNCTSSHTSKVLKSPVILVINGKSMAAS
SAAMVLGYKELDKDVNIKGVIVNNVKTNSHYQIIKSSIEKYCNVEVLGYFPPNNKFSLESRHLGLVPSVE
MKSLREKFYTLADEIEHYIDIDRIIEISESDEFESDFDFQTLIENNKIKEHVNNKSIAIAYDKAFNFYYR
ENIELLEELGLEINYFSPLEDASVPNADYIYIGGGFPEIFGKELEANESMRTSILEAHNNNIPIYAECGG
LMYLGEKLLNQEEQEFNMVGIFSGISKMTSSLKRFGYCIGVAKENTLLSKKGESIKGHEFHHSIFESDEK
CVYSMRKERDGNIVEEWDGGYSKGNTLATYLHTHFYNNLNCIENFLKKGNE
>gi|260688598|ref|YP_003219732.1| cobyric acid synthase [Clostridium difficile R20291]
MLQGTASNVGKSVLVAGLCRIFKQDGYTVAPFKSQNMALNSFITKEGLEMGRAQVFQAEAAKIEPIADMN
PVLLKPSGNNKSQVIVRGKVVGEMPSSKYHDYKLELVGVLKETFNSLNSRYDIVVMEGAGSNAEINLKDR
DISNMGMAEIADAPVIIVGDIDRGGVFASLAGTMLLLNEDEKRRVKGVIINKFRGKKELLQDGVKMLEDI
IKVPVIGVVPYTDIKIEDEDSVTTRFKKKMNKSDIHIEIIRTPHMSNFTDFNIFETQEDVSIRYVDYGES
LGNPDILIIPGTKSTIDDLTYIRKSGLESQIKNLHSQGKLIFGICGGYQMLGKKLKDPYHVESEIEEVDG
IGLLDTETTFEKEKTTTQVEATIVECISEYMNNLKGKKVKGYEIHMGITKRGNDVRSLDLITKKLDKEVN
YTEGSVNKEGNVIGTYLHGIFDEISFTRAILNNIRKKKGLGELESKVNSFNEFKDKEYDKLADFLREHLD
IEKIYEIMK
>gi|260688599|ref|YP_003219733.1| putative cobalamin biosynthesis phosphoglycerate mutase [Clostridium difficile R20291]
MIRLILIRHALTNDNKKGRLSGHINSCISEEGKLQINKITRYLSNENIDKVYTTPSTRTKDTVEKISKLK
LLEIEEKEALREISFGDFEGRTFEEIKIKYPNEFEKMIKEGNNYRYPNGESLIDSYKRVAKEIDNIILEN
DSNLDTKTILICSHAGTIRNIITHLISGSYKYHWNFKIDNASITVLEIDGGFAVIDKMNFTDFI
>gi|260688600|ref|YP_003219734.1| cobalamin synthase [Clostridium difficile R20291]
MKRFILILQFLTRIPIKLNVGFDDEFYKSIVYFPLVGFVIGILSYLIGWISMLLFEPFIASIIITLAGVL
ITGGLHIDGLGDTFDAIYSYRDKEKMLEIMKDSRLGTNSLLAIMFVLLLKVGFVYDIISNNSLWIIIFMP
MIARLGVMLLTYKTVTPREKGMGNLFIGKLTTSMLITAIIYTLLIVALITKFIFLLPNIVLIKVLGSIIV
VFVFIILFKKHIYKKIDGVTGDILGCGIELSELVYLIYIYLLIFMFF
>gi|260688601|ref|YP_003219735.1| bifunctional adenosylcobalamin biosynthesis protein [includes: adenosylcobinamide kinase and adenosylcobinamide-phosphate guanylyltransferase] [Clostridium difficile R20291]
MKLTWEDKYKNLICRSVLMSKIILVTGGARSGKSNFAEKLCFDRNNNTAYIATSIPFDDEMKDRVKKHQE
NRPRNWNTYEIYEDIYSIIKEIYKEHETVILDCVTLLVNNLMFEHNLNIEESSQEEINKLEQYIKEQVVK
LIEEIEKTNLYFVFVTNELGMGIVPGNKLSRIYADIVGRINQYIASKSNEVYFVVSGIAMKIKE
>gi|260688602|ref|YP_003219736.1| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [Clostridium difficile R20291]
MSLLESISKNIYSLDNSSIEKTKQRLDRLIHPTGSLGKIEDICMQLAGIFGNENFDTSKKVIIAFAGDHG
VYEEGVAPDPQNITKLQFPNFSKGLCGVGVISKFVGADVVAVDVGINCDEKLDGVLDYKIRKGTSNMAKG
PAMSKQEAIRCLEIGIEIAEQCIEKDYKVIGIGEMGIANTTPSTAIISVISGCDPLEVTGIGAGLKKERL
KHKAEVIRKAIEINNPNPTDGVDILSKVGGFEIGSMAGVILGCSANRIPVVIDGFISYAAALIAYKINPK
TREYMIASHLSAESGTKRALDILKLDPLLNMDMRLGEGSGAALAFDIIEASNYTYKNMATFDEIDMGR
>gi|260688603|ref|YP_003219737.1| putative aldose epimerase [Clostridium difficile R20291]
MNILQNENLIIESSSFGAELTKIFSKKYDKNILWDGNKKYWGRQSPILFPIVGKLFDNETIIEENLYSMT
QHGFARDMDFEIVDKGDTFVSYKLTDNESTLKKYPYSFELIINYTLNDNSIEVEWIVKNTDSKDIFFSIG
GHPAFNLPFYKQNDFSKHYLEFKSKNDVEKINLNGSFTDDIIPIGKLKNLHLNPEVFKNDALIYTNIDEV
SIYNNDGSKYVTISMEDFPLVGIWTPYYSETNSTAPFLCIEPWYGLADSINSNKIYKDKKFINKLSKGKV
FTASYNINIH
>gi|260688604|ref|YP_003219738.1| putative aminotransferas [Clostridium difficile R20291]
MKYNFNKVLNRKEGNCRKWSNHVIKEKFGLNEDAIPMDLADIDFECAPAIKESILKRASVGDYSYTFIGD
DFYDAIINWNKRRFDVYIEKDWIKLTFGTVSTLHYIVQAYTKEGEGVLINTPAYDPFAEAVANNNRKLCC
SSLKLDNNRYYLDLEDMENQMKYENIRLLIFCSPQNPSGRIWTKEELYQVSELCLKYNVILVSDEIHRDI
IFKDYRFVSLWNAHPEIYKNSIICVSPNKGFNLGGLKTSYVLIRDVKIRETLLERLKSNSITSPNVFAIP
AIVAAYNESEEWLDAMTSYVEENFEIVYDFFETNIPKAKVMKSDSSFLAWIDVREVFRNEEESKEFFRHA
NLTMVVGSYFVKDGDGFIRINVGCPRETLNEALNRIKKTYISMYC
>gi|260688605|ref|YP_003219739.1| putative peptidase [Clostridium difficile R20291]
MNNTIERLVSLIYKRGVDALLIKAKNTKRYIGALSGSGVYVLVTKDKNYQILDGRYIDEADKKTTGFIKR
IVSQGSYIPTIIELLKELNIKKLAIENQAMSIQEYLSLKNEGFEINLITNELWKLRAIKSKEEIELIKKA
CEITDEVFDEVISEIKKDMTELEVSALIQYHALKKGASGMSFETIVVSGERGAMPHGRPTNKKLKVNEAI
TIDFGVVYQGYQSDMTRTISIGKPPKIIKEIYDVVLEAQLSAIESIKEGTRASDVDKVARKIIDKHGFGE
YFNHGLGHGIGLGDGEVPTLNPNSEDILVEGMVMSCEPGIYIPNVGGVRIEDDIVIIDGKGVPLNKTSKE
FIILGE
>gi|260688606|ref|YP_003219740.1| PTS system, IIc component [Clostridium difficile R20291]
MFSKFEAFMNRVFMPLAHKVDNQRHLGSIKAGMVAMTPFTILGSIFAILPALPNMLGENNPISKFILNNS
AILDLPVSLSIGLIGLYACMCIAFNLGNYYKLYIPGCVALSTFSFLFLVASFTPDGALEIGNLGAKGLFT
GMIAGLGSVELYNFCNKKNITIKMPENVPDFVSRSFELIPTTIIVCGTFIVARFISLKVFGELPPQILTQ
FLSPLVGSMDNPWSVLALNFAICTIFFFGIHSSVFSPITRPIMITFIAENIAAMQAGETIPHFFTAGASS
AFFGFTGCGISIGCVIACMLSKNASYKKIGRVSLFPALFGINEPILFGAPIILNPIMFIPHVFGGAIIGT
LPMFFMHWGWLAKPVFDPPYVGVFLEGFLTNGDWHSILANALQLVLAVLLYWPFFKIMERQQNNKKQKEE
TKNIFSKEEEDLLDDLGLDF
>gi|260688607|ref|YP_003219741.1| PTS system, IIb component [Clostridium difficile R20291]
MKILLCCAGGFSTNMLMQNMKKVVKESAKLNEKDFEFTAIPADSIESEVDDWDIVLIGPQIAHKIDFLKG
ILEPKNKPFAVIDKDVYGKMDGATVMKLALITYKKHQLAQG
>gi|260688608|ref|YP_003219742.1| PTS system, IIa component [Clostridium difficile R20291]
MSTEVQIMELISTAGESKSKAFEALKKVKSKDFKGAKLLIEEARKIDIEAHRIQTELITQDLNEDVESPT
MSLLMVHAQDHYMTSQLAKDLIEALIYCLDK
>gi|260688609|ref|YP_003219743.1| endoglucanase [Clostridium difficile R20291]
MNIEFFKRLSEADGIASNEEEVRHVLLEELKAYSDKIICDGLGSIIFSKIKDESAPNVMICAHMDEVGFM
VRSIDKLGMIHLITIGGVKPLAQFVQKVRITTKEGKKIPAVINATYNNGKAENIYADIGAYTEEDVYNLG
INVGDMVTYTTSFEEFTLPDRLVGKAFDDRIGCFVMGEVLKELRKENLNCNIHFAATSSEEVGIRGAKTS
TQLINPDIVFVIDVACAKNEFVRDYTNQKQIDKGVMLMHRDRTLVPSRKMIDYVMEIADKNNIPLQHDMF
ESGGTDGGEAHLVNEGKPCVVTCVPVRYGHCAFSIVSNKDLENIIRLYTQLILNFDEEQYKHIRNFI
>gi|260688610|ref|YP_003219744.1| putative transcription antiterminator [Clostridium difficile R20291]
MRERIILETLKNSSGYLNIDYFADKLGVSTRTIRNEIKKIETIKECNGFKLEYKSKLGYILNIKDQDKFE
HYLRNLPSDLVENPEQRLESIIVELLVNEGYKTIEQLSKKFLVSSSQIKNDLKKIDEKIKDTELKLERKA
HYGIKIEGSIKEIQSILVDSYFRGNRNITEYRNKFIDNLKLANIRSTIKNVLNEHDLEANLTELEEILAQ
IIILYIRVSMRVVGNASNLKLYTEDLIIDKLLDKIFRDKKYNLNYDEKYYLKELIKLKTKDKKATIKNID
KNKLQDIMFEFFREIDKKYNSNFLEDKEFFNLFYLHIACLIERIKKNHKIINPFSVKISQQYPTVFNLSI
QFSKIIENEYHIKISQDEIGFIATHIAVPFEKREEANFNKKYKIAIICSSGGGSAFLINLRLKEIFPNAE
IRNFSLLEEKAVIEFAPDLIFSITNLLFEINAPVILINEILDELDYLDIKESVRFADHIGNISSPKQYIL
GLFDKNHFRCIKDKAKYKDILDSMSKCIVDEGACSPTYPKDVWERESYLSTIYTNGVAIPHPIEMTGNKN
IISVALIQTDIIYENRVPKIIFMISLIKGNLELHKQISKYLSKIMANKDMVDMLNKSQSYEEFMYKLKIY
LGG
>gi|260688611|ref|YP_003219745.1| putative tagatose-1,6-bisphosphate aldolase [Clostridium difficile R20291]
MALVTTTSMLKKAQDEGYAVGAFNVENMEMVIAVIEAAEELNSPVILQTTPSTVKYAGLDYYLANAKVAA
ERVKIPVAMHLDHGSSFDLAMKALRSGYTSIMIDGSHESFENNISISKSVVKACSPSLIPVEAELGKVGG
KEDDLDGGNSNDYTNPKEAKEFVDRTGISSLAIAIGTAHGLYKGEPKIDLDRLSEIKNVVSIPLVLHGGS
GIHDDIIKEAIKRGIAKVNYATELRIAYSKGVKKVLDEDSEVIDPKKYGLAGLQSVKDFVKEKIKVCGSV
NRV
>gi|260688612|ref|YP_003219746.1| putative tagatose-6-phosphate ketose/aldose isomerase [Clostridium difficile R20291]
MKMFKLEEQKLKDLGAIITTNEIKQQPELWLETYEIYKSNKEKLNRFIDTISNNHGQFRVIFTGAGTSAY
IGNSILPYLKNKNDIRKYIFEAIPTTDIVSNPYDYLKKDIPTLLISFARSGNSPESLAALNLGNKIVDNF
YHLAITCNPQGELAKMTKNDENNYLLLMPSKSNDEGFAMTGSFSCMMLSAMLIFDSLEDDVEKSYINAII
EMGRNVIDRKDEIHELINKDFDRVVYLGSGGLGGLTQEAQLKLLELTAGKISTVYDSPMGFRHGPKSFID
ENTLVFEFVSNCLYTRKYDLDVLEEIKRDKIAKFTCAVSVENENNFSGTKFEFKEKYNKLPDVYLAMPYI
LFAQTIALFVSVKVGNKPDTPSATGTVNRVVKGVTIYEY
>gi|260688613|ref|YP_003219747.1| putative oxidoreductase [Clostridium difficile R20291]
MKNIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTPNKVKREKICSDYRIMPFDSIESLAKKCDCIFLH
SSTETHYEIIKILLNLGVHVYVDKPLASTVNQGEELIELSKKKNLNLMVGFNRRFCPMYKEIKNNATEIV
SINICKHGLNSLRNVRFDSTLIDDYIHVIDTALWLANEDVEISGEDLFLTDNKNLIFVSHKLKGKHFSVN
TSMHRDSGTKLEQVEILSKGKIQRVKNLNVLEIEEGGNLTLKQSGAWVNILKQKGFEDISNHFIDCIENN
IKPAINGEECIKAQRLLEKIINSVK
>gi|260688614|ref|YP_003219748.1| putative tagatose-6-phosphate kinase [Clostridium difficile R20291]
MITVITFNPSIDRMYKVNNINIGEVQRVVSKNATAGGKGLNVAKVCKILKENPLAMGFLGGFNGEFIKNE
LRKLDIQNKFTKIEQETRNCLNIIEDNKVSTEFLEKGPIVEKSDLERFENDIEEVLKNTKILVASGSYCE
NMPIDYYEKIGNICRANNIKFILDTSGEALKIALKSKPYLIKPNIDEIRHLLGINIESREEIILSGKKLI
EMGAENVCISLGKDGMVYLNEYNVYDVKVPVVKCINTVGSGDSTVAGFSVGILRGYKIENLLKFANACGI
SNALNMETGFVDLGEIDKYQDLVEVKKLS
>gi|260688615|ref|YP_003219749.1| GntR-family transcriptional regulator [Clostridium difficile R20291]
MIKRNDKRPIYDQLVEILRTKIENEMEPNDRMLSERKICDEYGVSRTTVRLAMAELEHMGYIYKRHGKGT
FVAALSQNSQNLMESYSFTDYMRIQGKKPGTKVLSFEVVESTKYFSEKLGITPGEKMIKIMRLRLADDLP
MMLERTYLPMKEFIGLTKEKIEQKPLYEIFREDYGEIIKVADEEFSAGIISDKEAKLLEVPGDSPCLKLL
RTTYNDDNIVIEFTLSVARSDKFVYRVRHVR
>gi|260688616|ref|YP_003219750.1| N-acetylglucosamine-6-phosphate deacetylase [Clostridium difficile R20291]
MKHGIKEKGYLSIINGKFGEFQQERPNITDNVIDFSGKYIAPGLVDTHIHGLLGADVMDNTFEAINTISK
GLLKYGVTSFLPTTLTDSVDTLSDSVENISNSFNRVEGAKIQGIYLEGPFFTEKYKGAQNEKYFKDPDIN
ILKLWQRKSKNLIRKIAIAPERKGSIELTRYATKNNISVSLGHSSATFEQVKQVVNSGAKVFVHTYNGMS
PLNHREPGMVGAAMVLKDTYAELICDGHHVSPIAVKIMMDAKSSNNIALITDCMRAGAMEDGKYTLGKFS
VNVKNSVARLNSGSLAGSVLTMDKAVRNIVDWNIATLEDAIKMATYVPALSCNIDNVCGSIHQGMDADFI
VTDKNFNIYETYISGICMYKVNK
>gi|260688617|ref|YP_003219751.1| transposase, mutator type; transposase, mutator type [Clostridium difficile R20291]
MFNKNEILKKLIEEYDVKTTTDIQDMLKDLFASTIHQMLEAELDDHLGYDRYGNKNKNTKNSRNGYRNKN
VKSDFGEITLNIPRDRNGDFEPKVISNYKNDISGIENQVIGMYSKGMSTRDISSHLKSIYGIDISHSLVA
KITDRVLPLAHEWQNRPLDMVYPIVFMDAIHYKVRSEGRIINKAAYIAIGVNLEGIKEVLGIWIGENESS
KYWLKVLTDVKNRGVKDILITSVDGLVGFSDAIKAVFPDTEIQRCVVHQIRNTLNYVSYKNRKECAKD
>gi|260688618|ref|YP_003219752.1| hypothetical protein CDR20291_3277 [Clostridium difficile R20291]
MLNKKNVSLIVLVIVLSLFTAIFVFNNRNTNDKSKEIAKNNEEIVPKNLEALSIEQLTKIRDKAIDKNLE
GLREFGEDSVKQRKDSILNFEFGLVAFVNKNYSNLTEKEKLIRQINIVNYENSINDIMDPSGSFFELANQ
SYEINEFMLKNKKNYKEWSYEYIEFLIDHLDELCKFVDFDIKDVIDIIDPTIKTDLSEEQKKSLNDKLKK
VSSSDTLSEDIKKEIKNWENNLNSLNMNKNNSN
>gi|260688619|ref|YP_003219753.1| putative exported protein precursor [Clostridium difficile R20291]
MLNKKNISSIIMTMILSLSTTVFVFADENTNVKGQDVTKYNEEMVSKNLEDLSIEQLIDIRDKAIDKNLE
GLRKFGEDSVKERKDSILNFEFGLVAFVNKNYSNLTEKEKLIRQINIVEYENSINDIMDPSGDFFKVTNQ
SYQINEFVLKNGKNYKEWSYEYVEFLIEHLEDLCNFVDFDAKYVIEMVDPSIKPDLSDNQKKSLNNELIK
MYSSNTLSTNIKDEIENWENNLNINEKNSNEPLPRVSPSSYRQQALAYAKKHGYTNGYYGSTNRKNNAPS
PYYNFQKDGYGDCANFVSQCLHEAGVTFWTNNNPWYYYSTSNRSPSWAGAREFKIHWMNRIAYQTLTVSN
SLSFLRPATPVSILNSSGVATHTLISTDKHSNGYNFSYAAHSDEGARTNLLKKLEGKKISYYKVYWE
>gi|260688620|ref|YP_003219754.1| putative regulatory protein [Clostridium difficile R20291]
MVIKLTIEEYKNKYSTGDKIILSLKSFDNKELYYHETDNILNSKDEIDRLTSSKIFKIIEDKNDLALESY
YSSVIEGAFSTRKIAKSIIRGKMKPSNKSEYMIYNNHRALEYGLDNLDKLYSHKFIYNLHHILGENCLDS
EEYEYRTEKVYVCDSKGEIIHTGLDPLKIYNFMDELIIFMENSKVNDLVKSTIIHFYFVYVHPFSDGNGR
TSRALSYLYLINKGYDTFKEFSISYIISKNRTKYYKAILDVENKGYNLTVFIEFMLKSIIQSINEMRDMH
DRKSLESILKEELFENDITLSATEEHILKYICSKDNYSMTLENYIKKNKGRYLKAGIKEIELVDQLMEVF
NNLEEIEILSREKDVYKVNEKYLNMLEIS
>gi|260688621|ref|YP_003219755.1| hypothetical protein CDR20291_3280 [Clostridium difficile R20291]
MLKKKIISFLMAGIFVLSSGYNLVYASTFEENEYKQELVNENEFTIINSNENEMIVDKKGNNTYVSTKVT
PGSWKNVKYLGQKSRKLSSPYTRERIIQTIQWGLGYLSGGSSFLLGLAESIYREKVYDITKYGGVYTKTY
YRRQITDIRNSHANVPVPYRYEYVTYFYSSSNFKKVVYTERVGDGIKLANN
>gi|260688622|ref|YP_003219756.1| transposon tn21 resolvase [Clostridium difficile R20291]
MVVGYMRVSTAEQNEDRQLVTMKKHNVEKMYQEKISAKDTKRSKLNAMLDFVREGDTIIVHDFSRLARST
KDLLEIVELLEKKHVKLISDKENLDTSTPTGKLMLTMLGAIYEFERTNMLERQREGISIAKEQGKYKGRK
EVKIDNFGSYYDRYKTRELNKTQLAKELGVSRPTLDRLIKSHESN
>gi|260688623|ref|YP_003219757.1| hypothetical protein; hypothetical protein [Clostridium difficile R20291]
MDNLERNIQLIFSYMAKTFIRNGATIREAEKEANEIIKTNSSNLWGVNGLAYQLGKINLEFFCMYFIQDT
YLPKEDNVAAPIAKVHHELWEDIQESIIGDGSQQLGRIYPRGTGKSAFGDLATTVWSHCYKHKTYTLICS
DIGSTAEKFVKDIKNALLENEYIKKAFGVLLNDNDRKYICNSTQLELTNKTFIEAISSSSPMRGKKYNNN
RPDLIILDDYQSEENVRTEDAREKKFKKFSDDVKYAA
>gi|260688624|ref|YP_003219758.1| hypothetical protein CDR20291_3283 [Clostridium difficile R20291]
MLLCDPASAGGSKHDYSAFLVGSESENGLLCGRLAELAKINARTDFDKYILHMIYLLKVYPDITHVYIEK
NTFNGTAANQLELKIKNDDVLYYRDIEIINEHQKKNKDDKISTLIPVLNKGQMIFAEEDKAFIQQILNFT
GQKYSLHDDAPDISAEFINRIFNIKVNESITLLDRRNLGL
>gi|260688625|ref|YP_003219759.1| phage portal protein; subname: full=phage portal protein [Clostridium difficile R20291]
MYKYYKGETDAISNYKMVTKRSNNKINTNFLKKFINEEVAYSLANKITYTSRLGDEKIINDLEYYTCHWS
KKHDSDLLRYTLLFGFCYELYYVKNNEMKVRIIKPTDGCHYENEDGETIYFFREFKKDFKDDIYIDVYDK
EYIYHFDSNFKEIEKPTVNNIFNGNVPISICKRSEELGKNTIFNDIKGLQDAYETNLSDISNEISDFRNA
YLTFSECNIKEDDLPRMKELGILQVNGDGKIEWLIKDMNDTFVQNTLSSIKENIYKITSHINHNEKMQSN
TSSLAVVARLISTEWICSQNNDSIADTLFNRYKLLCIWLNKKYGFDYDYKDIKAKFTPKIPHNDLVVANI
LSQLGDKLSTETGLSQPSFIDNPHAEMEKAKKEQEIVSEGEILLDESKDYN
>gi|260688626|ref|YP_003219760.1| hypothetical protein; flags: precursor [Clostridium difficile R20291]
MNLRKTVISGMCALVCSSAVAIPAFADEYQDKNIEQYSAVNYIDDTMVKMSYIKSGTCNLSISGSTAKVT
CFVRGASNVTSTSIIARLQKSNDNGKTWSTIQTWNASGNISCSLSKSKTIGKGYYRVHSTIKANSESKNI
ISSTKKY
>gi|260688627|ref|YP_003219761.1| hypothetical protein CDR20291_3286 [Clostridium difficile R20291]
MKRLFALLLTLSLVILPSTLVFANEKAENDSIYAEAPLVFQSNEKAYTHGSGGTAYIGYMSSKHLNWRIT
SSKGIVILFSGTVEIRNSKNMLVASYPISGGGSSTISGQIDVKYLKKGDYKAILKGTSTTGGGVLVVKSG
LVQMFTI
>gi|260688628|ref|YP_003219762.1| hypothetical protein CDR20291_3287 [Clostridium difficile R20291]
MLRESIPIATKIIIDDLLSDDELNHVFSKGFERKMKKLIKQQKRSSLTNKIIFYSKQTAIVFLIVLASLL
TITMSSEALRSRFFRLVIRVYEDLTSFVFSTNGEDNLSLKNKEPEYIPKGFKEVDRVDDFVITYRNDENI
EIQYVTDKISSNSIILDTENAKVKDIFVNGHKAKYIVKGTFLQLFWNDNNFIYLLNVDYQNSGESEFYED
ILIKIAKSIK
>gi|260688629|ref|YP_003219763.1| hypothetical protein CDR20291_3288 [Clostridium difficile R20291]
MLIYLAILELEEDKIKFEKVYEKYRQIMFYVANKILKDDHLSEDAVHNAFLRIIKNIDKIDEVDSPRTKA
FIVIIVERIAIDFYRKRKREKVSDIEEEYKNREINFSIEDKVCESNLAIALAKLNESYFQVLSLKFQYGF
SNKEIANALNLGEENVYKRIQRARKKLKEILEEMEVGNIE
>gi|260688630|ref|YP_003219764.1| leucine-rich repeat protein; flags: precursor [Clostridium difficile R20291]
MNIKRINLLLSTVMAAVIISLPLAVTANAMEKTESDNNVKIELSDKEVEELHNYWPEDKIFSDEKIDEIL
IKTGQFTQKELDKINQEVDDSAKKVNQNSRVKYINGYNKYRTFTKNGKNYLYIYVSGKTLKKIKAGTDLA
STFGGFLPKIWVELDVVAIGKIITINMDGINTNYGIVLSYIEDKWNFQGATYTYRYDHWFYQT
>gi|260688631|ref|YP_003219765.1| transposase mutator type [Clostridium difficile R20291]
MFNKNEILKKLIEEYDVKTTTDIQDMLKDLFASTIHQMLEAELDDHLGYDRYDNKNKNTKNSRNRYRNKN
VKSDFGEITLNIPRDRNGDFEPKVIRNYENDISGIENQVIGMYSKGMSTRDISSHLKSIYGIDISHSLIA
KITDRVLPLAHEWQSRALDMVYPIVFMGAIHYKVRSEGRIINKAAYIAIGVNLEGITEVLGIWIGENESS
KYWLKVLTDVKNRGVKDILITSVDGLVGFSDAIKAVFPDTEIQRCVVHQIRNTLNYVSYKNRKEFAKDLK
KVYAAITEEVALSELSLLEEKWGNQYAIALRSWRSNWNELATYFKYPQEIRTLIYTTNSMESYNRLLRKV
TKSKSIFPSDDSLHKSLYLATMDISERWTQKIRNWTQILAHLSIYFEERILTLN
>gi|260688632|ref|YP_003219766.1| putative exported carboxy-terminal processing protease [Clostridium difficile R20291]
MYLVISKKKAIFLGVILVIITAMVTSAFQLTLGNKVVISKELYEDYKKYDKLLGLESIIKQDFYKKVSDT
DLVNGAAKGLFLGTNDKYSGYYTKDEMENLINDSEGSYVGVGMYIGASKDGGLVVVPMKDSPAEKAGVKS
GDKLVKVNGKSVSYKNSDEAVRMMKGKKGKTVELTILREDKQLNFKVKTDQIIEKSIESKVIDNDLGYIE
ITQFISSTYTDFDKALKELKAKNIKGLVIDLRNNPGGMLDICKEVADELIGEGTIVYTKDNKGNTEYLKS
DKEKLGLPIVVLTNGESASAAEILTAAIVDNKEGISVGTTTFGKGLVQSVVRLKDGTGYKLTTAQYFTPN
GDYINEKGIKPTIEEKDENKQLDVATKWLREQIDK
>gi|260688633|ref|YP_003219767.1| putative 5-formyltetrahydrofolate cyclo-ligase [Clostridium difficile R20291]
MKKEFRKKVIESRKNKSANFVLSNSNLITEKLLQMEDIRNATNIMLYLNFNNEVQTDNLIKKLLSLKKIV
SSPITIKENHTLIPTQITDLKEGLRIGAYGIREPNEKSPTIDIKALDVVIVPAVAYDIHCYRLGYGGGFY
DRFLENLRKDAITIGIAFDFQIFDSIPKETHDAQLDYIVTETRIITPNN
>gi|260688634|ref|YP_003219768.1| hypothetical protein CDR20291_3293 [Clostridium difficile R20291]
MGGVIRLNVKFNIKGIIYGVIALVFVIGGFIFIPSMFVEKSKPIDYTVLQRNSIPEKILDVMDKYTNEER
ALAAKIDNKIYIIVTRGNNKYGIEMDKIESVVEEGKDVLRVKIKYKDKEDSFPYIVVETNMSELPDRIEL
NATK
>gi|260688635|ref|YP_003219769.1| hypothetical protein CDR20291_3294 [Clostridium difficile R20291]
MSEKVNVKTVISFAGAYVATVIGSGFATGQEIMQFFSFYGFAGIIGGIISMVLFSWMGASVMSKGKELQL
KEPIKIYRVYCGKYLGIFFEWFGPLFLFGVFVVMISGAGATLTEYYGLNPFVGRVGMAVVALLTVSLGLD
KLSKILGGIGPIIIIFTLLVGGISLAKNIGNIGEAAQVLSTVKIAKPVPNAYLSGVIYTTYNTIVVMAFL
TGLGASAANKKEAICGGILGGVALMAAAIMMHLAILSDIGNLYSKAIPSLFLADKISPVIGVLFSIILIL
GIYTTAVPLLWSVTNRFVDDKHPKFKLITLIAAILGLIGGFLPFDKLVGILYPYTGYMGVIILVCVLYRQ
ITKTSGYQEGISDK
>gi|260688636|ref|YP_003219770.1| transketolase, pyridine binding subunit [Clostridium difficile R20291]
MATREAYGKALVKLGQINDNVVVLDADLSKSTKTHDFYKSFPDRFFNMGIAEQNLIGAACGLSTAGKIPF
ASTFAMFATGRAFEIIRNSVCYPKLNVKICATHAGLTVGEDGASHESVEDIAIMRAIPNMTVLVPADGVE
TEKIIFEIAKYNGPVYVRLGRSSVPVLFDEDYKFEIGKGTVLREGKDVSIIACGIMVNEALLAQEKLQEE
GINARVINMSSIKPIDKDLILESAKETNAIVTVEEHSIIGGLGSAVSEVVGESCPTIVKKVGIKDTFGES
GTPNELLKKYELTCDDIIKTVKEAIIAKRM
>gi|260688637|ref|YP_003219771.1| transketolase, thiamine disphosphate-binding subunit [Clostridium difficile R20291]
MRDHKGLNEIARIIRRDIVSMIHRAKSGHPGGSLSVVEILTALYFDEMNVDSSNPKMEDRDRFVLSKGHA
APALYATLAEKGYFDKEELNGLRKIGRMLQGHPDMKGTPGVEISTGSLGQGFSVACGMAMASKLDNAPWN
VYTLLGDGEVQEGIVWEAAMSAAHYKLDNLIAFLDNNGLQIDGDIESVMSLGSIVDKFKAFGWNVIEIDG
HDFDQIFAALDIAKSTVKKPTMIVAKTIKGKGISFMENQAGWHGTAPSDEELEKALLELGGADNE
>gi|260688638|ref|YP_003219772.1| putative regulator of cell growth [Clostridium difficile R20291]
MSTNCEIKRGDLYYADLSPVVGSEQGGVRPVLIIQNDVGNKYSPTVIVSAITSQINKAKLPTHVEISSNE
YGLNKDSVILLEQIRTIDKKRLREKIGCLDENMMIKVDDGLQISLGLFTF
>gi|260688639|ref|YP_003219773.1| CopG-family transcriptional regulator [Clostridium difficile R20291]
MYDKSKEKIEVTLPDSLISEVDSIVQMENSNREDFAKAAFQFYITQKKKIHIKESMKTGYREMGQINLSL
AELGMTVEEVSSDDKNEGKIAQGEY
>gi|260688640|ref|YP_003219774.1| alanine racemase [Clostridium difficile R20291]
MQKITVPTWAEINLDNLRFNLNNIKNLLEEDIKICGVIKADAYGHGAVEVAKLLEKEKVDYLAVARTAEG
IELRQNGITLPILNLGYTPDEAFEDSIKNKITMTVYSLETAQKINEIAKSLGEKACVHVKIDSGMTRIGF
QPNEESVQEIIELNKLEYIDLEGMFTHFATADEVSKEYTYKQANNYKFMSDKLDEAGVKIAIKHVSNSAA
IMDCPDLRLNMVRAGIILYGHYPSDDVFKDRLELRPAMKLKSKIGHIKQVEPGVGISYGLKYTTTGKETI
ATVPIGYADGFTRIQKNPKVLIKGEVFDVVGRICMDQIMVRIDKDIDIKVGDEVILFGEGEVTAERIAKD
LGTINYEVLCMISRRVDRVYMENNELVQINSYLLK
>gi|260688641|ref|YP_003219775.1| putative lipoprotein [Clostridium difficile R20291]
MRKKWTIVCIMFLALVIIVIGCQKRQSTKEEVYKDFQKQISDMNYYSCKAEVEVVGNKSPHNYVLIHTYK
KTDNYKLEVISPKHLKGKSIEYQGDKILVKNPKISDVVELPNTGKNNQYLFVGDFIKNYLQNEEMKVKLS
KGHLVLETFIPGDNKYFNKQVLYVNADTKNPEKMEVLDKEGVPRFTVKYKDFEYRN
>gi|260688642|ref|YP_003219776.1| hypothetical protein CDR20291_3301 [Clostridium difficile R20291]
MMDKTAKEIMTTDVIVAKQDDSIADVANMLIAEKIGGLPVVDSENRVVGIISETDILKKEKYIEAPLYIN
LLQGLIFLDDLKKVEKDIKQVAAYKVGELMSKDIIKVHEDDKFDDVANVMIKKSINRVPVVDDDNKLKGI
ICRYDIIKALYNE
>gi|260688643|ref|YP_003219777.1| holo-[acyl-carrier protein] synthase [Clostridium difficile R20291]
MNIFDIGVDIIEIDRIRKAVDKNNRFLEKIFTDREIEYFNSKNFKAESIAGNFAAKEAISKSIGTGIRLF
NFKDIEVLRNEMGKPIVKTYNNLAKMCIDYNVLEIKVSISHSKDYAIANAITIIKD
>gi|260688644|ref|YP_003219778.1| ATP synthase epsilon chain () [Clostridium difficile R20291]
MASEFSLKVVTPSNTFYDGDVEMIVVRTTKGDKGVLKGHIPFVSGIPVGTLKIKKEGSFKEAKIAEGFIN
VTQDKTVILTESAEWI
>gi|260688645|ref|YP_003219779.1| ATP synthase beta chain [Clostridium difficile R20291]
MANVGKVVQIVGAVLDVKFDSEQSLPNLLNALVIKLGDKEIVAEVAQHIGDDTVRCIAMSATDGLVRGME
VVDTGGPISVPVGDETLGRIFNVLGKPVDGKPAPKSAPKLPIHRPAPAYDELETTAEILETGIKVVDLLA
PYLKGGKIGLFGGAGVGKTVLIQELINNIAKQHGGISVFSGVGERTREGNDLYGEMSESGVINKTALVFG
QMNEPPGARMRVALTGLTMAEHFRDEQGQDVLLFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMG
ALQERITSTKKGSITSVQAVYVPADDLTDPAPATTFSHLDAKTVLSRQISSLGIYPAVDPLESTSRILDP
SIVGKEHYEVARGVQSILQRYKELQDIIAILGMDELSDEDKLIVARARKIQRFLSQSFTVAEQFTGNPGQ
YVPVKETVRGFKEILEGKHDDLPESAFLFVGTIEDAVRKAKGSM
>gi|260688646|ref|YP_003219780.1| ATP synthase subunit gamma [Clostridium difficile R20291]
MGTVESTKQITKAMELVASSKLRKAKEKAEDSREYFNTLYNTVKDIAQTTRGIRNEFLKEREVKNKCYVV
VAGDRGLAGGYNSNVLKESVSHMKGKKETVITVGKKAHEFFSKRNYNIAKDINSVEACGYEDATEISQTI
IDLYKKGEVDEVYIAYTKFKSALSQEVEILKLLPLVFEKDTDEQGMAVKEEKQNRSKVQYIPSAEAVLSY
IVPQFISGTVYGGILESFASEQGARRTAMESATDNANEMLSNLELSYNRARQSAVTQEITEIVGGVEALK
>gi|260688647|ref|YP_003219781.1| ATP synthase alpha chain [Clostridium difficile R20291]
MNLKPEEISSIIKQQIKNYENKVELTDTGSVLTVGDGIASVYGLEKAMSGELLEFPGEIYGMALNLEEEV
VGAVILGDDSEIKEGDIVKRTGRIVEVPVGEALIGRVVNSLGQPIDGKGPIAYTKTRPVESEAPGIIDRR
SVYEPLQTGIKSIDSMIPIGRGQRELIIGDRQTGKTSIVIDTILNQKGKDVICIYVAIGQKRSTIAQLVS
SLEKGGALDYTIVVSATASESAPLQYIAPYAGAAMGEEFMYNGKHVLIVYDDLSKQAVAYREMSLLLRRP
PGREAYPGDVFYLHSRLLERAAKLSDELGGGSMTALPIIETQAGDVSAYIPTNVISITDGQIYLQPELFY
SGVRPAVDPGISVSRVGGSAQIKAMKKVAGTLKLAYSQYRELAAFSQFGSDLDEDTKKRLAQGERIVEIL
KQGEHQPIKVENQVMIIYAVINNHLEDIPIDNIARFESELYAFVDNNYPEISRKILGGEDFTHDLTDAIN
EFKEKFVVEV
>gi|260688648|ref|YP_003219782.1| ATP synthase subunit delta [Clostridium difficile R20291]
MINVIANRYAEALFQLGEEENSTDVLFKELEKVVDMMTKVSKDFYKVLKSPLVSKSEKKNLVEIIFSKEV
SSNIKNFLKVLVDKDRISYLEDIELAYKELLNKKNNVIDGVAISAIPMSETDIKELEVKLSNKYNKNVTI
ENVVDKTILGGVLVRIGNEQIDGTVKTRLDKMKEKLSEVIS
>gi|260688649|ref|YP_003219783.1| ATP synthase B chain [Clostridium difficile R20291]
MERRIIMEKALVGITWEFVFQIVNTFIIFLLLRKLLFKPVLNIIESRENDIKSDLAEGEKAKNEGLALKK
EYESKINFAKDEGQEIIKQATIRAEQKSDDIVNTAKKDALDIKEKANKDIEQERQKVINEIKNDISNIAL
LAASKVIEKDLDKSKHEELIENFIKEVGEAK
>gi|260688650|ref|YP_003219784.1| ATP synthase C chain [Clostridium difficile R20291]
METAIVAAASAIGAGIAVATGIGAGIGQGIAAAKAAEAVGNQPEAKGDITSTLLLGVAIAESSAIYGLVI
SIILLFVNPFFKYLGM
>gi|260688651|ref|YP_003219785.1| ATP synthase A chain [Clostridium difficile R20291]
MNQAHYYLIGNFKISETILVSWGIMAFLAIASYFLTRNLKKVPTSKVQIFLEFAVGGLAKMVTDVMGKNT
VKRMPYMIPYIGSLFLFFACSNLSPLLGLRSPTTDLDTTAAWAMITFFMIYFAGVKFKGLSYFKELAQPL
AIMLPINIIGELARPISLSFRPFGNILGGTIIMGLFYQLLGFISSLIPGLSIPIGEILIPVPLHLYFDLF
AGLLQAYIFIMLTMVFISSAGELD
>gi|260688652|ref|YP_003219786.1| ATP synthase protein I [Clostridium difficile R20291]
MDIKLLNQVRSVTKGIVIFDVVLIVLMLITSTLSKPVLLGLIFGSIIAMLNFRLLAISLEKSVTFPAGKA
QAYASAQYAIRLFIMAVVLIASATVPHLNIIGTALGLLSTKFVILSKNFINKLKRKEA
>gi|260688653|ref|YP_003219787.1| putative ATP synthase protein [Clostridium difficile R20291]
MSKRNTHTEIAKLFSLISQIGLMIVISILGCTFLGKFLDSKLNTTPVLTIIFLLLGVGGAFSGVYKTLIV
YTRRK
>gi|260688654|ref|YP_003219788.1| putative cytidine and deoxycytidylate deaminase [Clostridium difficile R20291]
MRPSWDEYFMEIAEVVKKRSTCIRRQVGAVIVRDKQILTTGYNGSPRNLEHCENIGCKRQELNIPSGERH
ELCRALHAEQNAIIQAAHNGISVDGATLYVTTRPCVLCAKMCINAGILKIVYEGDYPDDMSTELLKEAGI
ELIKF
>gi|260688655|ref|YP_003219789.1| hypothetical protein CDR20291_3314 [Clostridium difficile R20291]
MKNCIAVRGAGDLATAVIHKLHNSGFKVVALEIEEPLAIRRQISFCEAVYEKKVTVEGVECIFCNTEKEI
EEVLSQHKVALIIDPKGEKLSKLNPIVLVDGILAKKNLGTTKDMAPLTIALGPGFCAGEDVDVVIETMRG
HNLGRIITNGRAEKNTGVPGAIKGFSKERVMHSQYDGIMENVCKIGDIVEKGDLLCYINNYEKKHEVRAT
ISGVLRGLLKDGAKVNKNLKILDIDPRKEEVKNAFTISDKARCIAGGVLEAILNNGIYPQN
>gi|260688656|ref|YP_003219790.1| uracil phosphoribosyltransferase [Clostridium difficile R20291]
MSKVVETNHPLIQHKLTLMRDKNTGSKDFRELLTEIAMLMGYEITKDIPLKDVEIETPIQKTSSKVVAGK
KLAIIPILRAGLGMVDGLVSLMPAAKVGHVGLYRDPETLKPVEYYCKLPQDIGERDIIVVDPMLATGGSA
VAAIDLLKSKGAKSIKLANLVAAPEGIAEVQKYHDDVDIYVASVDERLNEHGYIIPGLGDAGDRLFGTK
>gi|260688657|ref|YP_003219791.1| ribose-5-phosphate isomerase 2 [Clostridium difficile R20291]
MKIGLGCDHGGYNLKKEIISYLESKGIECVDYGTNNATDSVDYPVYGEIVANSVINKEVDYGILCCGTGI
GISLAANKVPGIRCAVVSDVFSAKMSKAHNDANMLSLGERVLGKGLALEIVEAWINTDFEGDRHARRVNM
IKSIEEKHNK
>gi|260688658|ref|YP_003219792.1| low molecular weight protein-tyrosine-phosphatase [Clostridium difficile R20291]
MNILIVCTGNTCRSPMAEAILRKAIKESGRSIEEYSISSAGISTANGMGASENSIEVLKEIGIDLSNHRS
KVITKKLIDESDIILTMTKSHKEILVQAVPKCKEKVYTFKGFANKNEEDISDPFGGNLDIYRSTMREIMY
SVNEIVKKI
>gi|260688659|ref|YP_003219793.1| hypothetical protein CDR20291_3318 [Clostridium difficile R20291]
MKAGIQKMKTIISNIDINNIDYEEIKIQAKLLREGKTVIFPTETVYGLGANALDENAVKKIYEAKGRPSD
NPLIVHIYEKEEVYDLAKDISDKAKLVIEKLWPGPITIILNKKDIIPYKTSGGLDTVAIRMPSNVIARAI
IKEAGIPIAAPSANISGRPSPTKAKHVYEEMNGRVDGIVLGGDSNFGLESTVLDLTEETPMILRPGSITK
EVLEELLGEVKLDPSLSKKEDNQKAKAPGMKYKHYSPNADVYIISGKRENVATKINDMIKSNRDKGLKTG
VMCISRNREFYDGEVIDLGNSLEEVASNLFDALIEMDKKGVDVIYSEEFPKTGVGQAIMNRLLKSAGYKV
IKA
>gi|260688660|ref|YP_003219794.1| putative zinc transporter precursor; putative zinc transporter precursor [Clostridium difficile R20291]
MILKVTIIGLLAGVIGTGLGGVISAIFKREVDKYLSFFMGLSGGIMLAVVVFDLMKESMDKMGIINTVIF
TFVGALITMYIKTKLDVSGNMASGYLIFISILLHNLPEGLAIGSSFMSTESLGITLAIVIGLHNIPEGLA
MALGLVCNKMKLSKVILFTVIAGLPMGLGSFLGVYFGGVFTSLIGVFLATAGGTMMYVVLEEIFPHSKSV
YCIIGFLLGTMIVNYI
>gi|260688661|ref|YP_003219795.1| peptide chain release factor 1 [Clostridium difficile R20291]
MLKKLEVLEDTYKDLSEKIGDPDVINDQKVWQKYIKEHADLEPIVMKYREYKSVLDSIKESKEILQEESD
EELRELAKMELAEMEEKVAPLEEEIKILLLPKDPNDDKNVIVEIRGGAGGDEAALFAGDLFRMYSRYAER
RRWKIELLSASDTGVGGYKEVSFMIKGKGAYSRLKYESGVHRVQRIPSTESGGRIHTSTSTVAVLPEVED
VEVEINPNDLRIDVFRSSGNGGQSVNTTDSAVRVTHIPTGEVVSCQDGKSQLKNKEQALKILKARLYDKA
LAEQHKDIAAERKSQVGTGDRSERIRTYNFPQGRISDHRINLTLYKLDAFLDGDIDEMIDALITVDQTEK
MTAI
>gi|260688662|ref|YP_003219796.1| protein methyltransferase [Clostridium difficile R20291]
MTIKDIIIKYSDKLKDISDTPRLDTELLLQKTLGVDRLYIHLNLNKELTEEQKTKFMGFAEERLNGRPIA
YIVENREFMGLDFFVKEGVLIPRPDTETLVEEIIEICREKKDVSILDIGTGSGAITISLAKYIENSKIMS
FDISETALEIAKKNAIINEVGEKIKYINSDLFTAISDSNIKFDIIVSNPPYIKKQDIETLHKQVKDYEPY
NALEGGEDGLDFYRRITEQGKKYLNKCGILAYEVGHNQAEDVINIMKSNGYKKIYTKKDIQGIDRVVIGY
NI
>gi|260688663|ref|YP_003219797.1| hypothetical protein CDR20291_3322 [Clostridium difficile R20291]
MAKQAVGGQAVIEGVMMQSKDKRAVAVRKSDGEIALKEDRIKSWVRDKNIDKIPFVRGSFVMIDTMIQGI
KSLNFSSEFFMEEAEEDKFDLFIKKIFKDKANDIIIIFSLVIAMLLSAGLFIFIPTLVGGAFSKVMPNDF
MLNLIEGIIRIAILFAYIVLISRSKDIERVFQYHGAEHKSIYCYENDLELTVENARKFKRLHPRCGTNFL
FIVMAVSIILFAFFGWPNPILRIFMRIICVPIVAGLSYEVIRVLGKYDNGFTKIIAYPGMMLQYFTTKEP
DDEQLEVALEALKAVVD
>gi|260688664|ref|YP_003219798.1| 50S ribosomal protein L31 [Clostridium difficile R20291]
MQKEIQPKYNPVEVRCACGNTFVAGSTKDEIKVEICSECHPFYTGKQKNIEKGGRIDKFKKRFKMD
>gi|260688665|ref|YP_003219799.1| transcription termination factor Rho [Clostridium difficile R20291]
MRRIFLILDDKVLEGLGSKTLVELREIAKELKIKSITTYKKNELIEIINSKSKNEEKVNEETKEKNEDIK
EDIKNRKENIERESIEKEVEYKSPTKSYNKKEIDTQNISQNQENRNQRNDYNKTTSVNDSNKSSNISNRM
VRNNNKNYYMPKQVDESKIVDEFNTSKEDEVVGVLEILPDGFGFLRGSNYLSTEGDVYVSPSQIRRFNMK
TGDKIKGITRHPKSGEKFRALLYVQKINDENPDTAIQRNAFETLTPIFPEERLTLETNRNEIATRIIDLI
SPIGKGQRGLIVAPPKAGKTVLLKSVANSIAKNHPNVELIVLLIDERPEEVTDMKESIEGDVIYSTFDQV
SSHHVKVAEMVLNRAQRLVEHGKDVVILLDSITRLARAYNLTISPTGRTLSGGIDPGALHGPKKFFGAAR
NIRQGGSLTILGTALVETGSRMDDVIFEEFKGTGNMELHLDRKLAEKRIFPAIDIYKSGTRRDDLLLDDE
EKTALWRLRREMSNNSVMEITDKVIELIKRTKDNKEFVKSIKNL
>gi|260688666|ref|YP_003219800.1| utp--glucose-1-phosphate uridylyltransferase (general stress protein 33) [Clostridium difficile R20291]
MQVKVKKAVIPAAGLGTRFLPATKAQPKEMLPIVDKPTLQYIIEEAVASGIEEILIITGRNKKSIEDHFD
KSVELELDLEKKGKKELLEVVQNISNMINIHYIRQKEPKGLGDAIYCARHFIGDEPFAVMLGDDIVDNDV
PCLKQLTDAYEEYRTTILGVQKVNQEDTNKYGIIEAKNIEGRVYKVKDMVEKPESGKAPSNIAILGRYII
TPEIFDILKDLPPGKGGEVQLTDALKILSKKEAMYAYNFEGKRYDVGDKLGFLEATVDFALKKEDLKEDF
IKYLKHVCSEFDKNNNVLYNNTDEKIDLIEVNEARELEIQK
>gi|260688667|ref|YP_003219801.1| putative oligopeptidase [Clostridium difficile R20291]
MNRKLCKAIIPLFISIFCMLIISIKADQGYQKNNDRAIAVMNNNDTEDDAEKKQEVDYEKTCWNLQSLFK
SDDQWKKELKSFDKDTKELKNYIGKVTKSPTHLSFALNIKEKLDIRLNKLSAYVKLKQDTNKNSYKYLDM
SDSMSKSYGNYMGICSDLELEILKLSNKDYKKIISNKNINRKYGAYLRDIRRNKVHYLDDKSEDILSKVS
SISSLPSQVYELFRNMDRKTNLTPAQYASELESVDRENRKKAYQDELITYNDNINTIAGLITGQVKKNIF
YSQERGYESSLEMYLESDNVDEKVYNNLIRTVNSNMDSLHKYIDLRKKVLKLDKVHSYDMFVPMVKAVDN
NINYEKAQSIVYSALSPLGKEYNDVVYKAFNEKWIDVYSHENKVSGGYCLSVYENHPYILLNYNNSLGSV
STLSHELGHAVYEYLSSKNQNYFNSNPSIFTHEVASTTNEALLYEMLIKEAKGNDEKAYYITQYLDLIKD
TLYTQTMYAEFEKTIHELVEKGKSVNALVLNDVWGQLLKKYYGQSYELDQLSKVGWARIPHFYNSFYVYK
YATGCSAGVSFAQDILKNGSDNYMSFLKKGSSDYPINLLKSSGINLTNTKPIENTIKKFDSLVAELEKLL
>gi|260688668|ref|YP_003219802.1| stage II sporulation protein e [Clostridium difficile R20291]
MQRSVAVVKNKTVKPNVIKLISGYIDFTTAAFAVMGFLLSRSIIVDSVAPLGIAFFICASKIDKYKIPVF
ISTLLGILLSSNDFGNVAKYAVCLTIFMAMNKKLKLSDSIAKVAFIGAIILLPISMGQAFFSNRYVYGLL
IAGVEAIIMFISIYVFSYGIGLMANVNNRMSVRTEEAISISLLLTFSIMGIGDISLFGISIRTILSTVLI
LLTSIVGGATMGASSGVIIGVASILNNMTSAVYMGIYSFSGLISGAFNKINKYFCILGYILSWTIIYLYT
SGITSNMMQLRDILLGCLIVLVLPERLFNKIEKLIKSNVASNEIVYDYIMRSKNLTNSRLNSIYKTYDDL
ADTFDKIREKDKVLDQRDIANVIDMIHNDECKSCSMRRMCWESRFNHTYTMIYNILEKIEEKGELSLNDI
PKNFRKECMKPESIVKISNHYYKMFVLDYDWSVKFSESRKLIANQIRSISKSIKSLSQDLEGDIMLDIEK
EKNIYEQLERYDITVDKVSYLTKSNNEFEISIEKKTCHDGCMCEDKIVNIISDLVGENMSVRKIGCHCLG
GKCKATFVKSQKYKAVTEVSAMSRDGHILCGDNYTYMEINDGKYMMAISDGMGKGKKAYEESSATIDILE
KMIDAKIKDEIVIDTINNMLLLKSSEEMFSTLDLGILDLKRGCLETIKMGACSTYIKREDGEVDLISSSS
LPVGILSDVKIDRKNVKVKEGDYVIMVSDGIVDAGRNNNLGDNWLIYFLKNIETTNPKEISNLILDRALE
LQALQIEDDMTVLVTKICTK
>gi|260688669|ref|YP_003219803.1| putative exopolyphosphatase [Clostridium difficile R20291]
MKVGAIDIGTNSMRLLIADYRDGNFINRKKFVNTTRIGYGVDSKGYIKEDAIKRNIKALKEFSDKCNDEK
CEKIYCMGTSALRDSKNGDYFVKLAKEETGIDVDIVTGIEESNLGFKGVLEGIQGDDTIIVIDIGGGSTE
FIVGDSEGIKFNKSENVGALRMTERFLKHDIIEDEEFEAMSSFIYDEIDKTLNHIKDRGLKTLIGIGGTI
TSLSAMNQELEIYSMEKIHNSKIHKKEIEEILQKLIKMTLSDKKNLKGLQEKRADIITAGVKILNIIMEK
LEIEEITVSEYDNLEGLICQKSKKMY
>gi|260688670|ref|YP_003219804.1| putative septum formation protein [Clostridium difficile R20291]
MNLRKKFSGQIIVISLFLGISIFSMMTGFVFEYTKAKEYKKEIASLNKQLKKTEIQINSLKKDEKSYEGD
LEDIARKRLNMVKPNETVYVDINR
>gi|260688671|ref|YP_003219805.1| hypothetical protein CDR20291_3330 [Clostridium difficile R20291]
MIPFTQDVSIFYATIYGGILIGVLFDFYRGLRGNFKFINYFAIIFDVLFWFLATVIIFVTINLTEFFDLR
YYHFVALFIGFILYYNTISKIVLSIINKIIRFVRNSFKKVTHYIVSFLNNLYYVIIYSLHLLFDIIFYIP
NIFIATRKSIKRKSNKKLKNKKKSKPKKKKNKTKKRV
>gi|260688672|ref|YP_003219806.1| hypothetical protein CDR20291_3331 [Clostridium difficile R20291]
MEQNITLKDRSKLVISGVEHIYSFNDKRVELKTSVGEMVIEGENLDMSKLSIDENIISIDGTINSMVYAK
PKKPQESFLKKVFR
>gi|260688673|ref|YP_003219807.1| putative RNA-binding protein [Clostridium difficile R20291]
MIIMRLDKFLKVSRIIKRRTVAKDACDKGIVTINGKVAKSSSEVNIGDTLEIQFGEKKMKFKINEVKEHV
LKNDAKEMYEILE
>gi|260688674|ref|YP_003219808.1| DNA-binding protein HU [Clostridium difficile R20291]
MNKAELVSKMAEKSGLTKKEAEAALNAFMSSVQDALVNNEKVQLVGFGTFETRERAARQGRNPRDPEQVI
DIPASKAPVFKAGKGLKDIING
>gi|260688675|ref|YP_003219809.1| putative bifunctional protein [include tetrapyrrole (Corrin/Porphyrin) methylase and nucleoside triphosphate pyrophosphohydrolase] [Clostridium difficile R20291]
MKFANRSDVMGKISIVGLGPGDYSLISQGVLESLINSPKVFFRTEKHPIIDKLKETIQYTSLDYFYEKEE
NFDNVYLKISEFIIEESAKGDLVYAVPGHPRVAEKTVSIIERLANEKHIAVEILPSMSFVDAMFNYLAID
PSEGFKLVDAFEIENSYIDLDTSMIITQVYDKFIASNVKLKLMEHYDYNQEVCIVNGAGVKDLESKKFIK
LCELDRNENFFDYLTSLYIPKSSKKMYNTVHDLEIIVNTLRSPSGCEWDKKQTHQSLKNSVIEEAYELCN
AIDNNDIDEMVEELGDVLLQVIFHCQIGNEEGYFDLKEVVNGICKKLIHRHPHIFSGAKLDMSKFEKTWE
ELKKEEKGESTITDGLRRIPKHLPALMKASKVQHKAALVGFDWDNVEDVFKKIEEEYQELLDEHRVGNIK
YIKEELGDLLFSIVNLARFLDIDSGEALNCTTEKFINRFDFIEKSAMNLNKKLEDMTLEEMDEFWNQAKK
Q
>gi|260688676|ref|YP_003219810.1| stage V sporulation protein B [Clostridium difficile R20291]
MNNNKNKDSFLKGALILGLAGVIVKIMGGFFRIPLGNMIGSEGMGYYQAAYPVYTLFLTLATAGFPTAVA
KLVSEKVAIGNFKGANKIFKVSHTVLFITGIISFCILFFGADYIVTNVMKNPGALYSMKAIAPALLFVPA
MSAYRGYFQGRQDMTKIAVSQVAEQFFRVVLGLTLAYLLMKSLGQTFGAAGAISGATIGSIASMLYLVFA
YMLGRKERRAEIDASQRFKDERVSYIFKKLLTVAIPITIGASVMPLVNMIDNVIVIRRLMEAGFTYKVAN
SMFGQLTGMAMATINLPAVITTAMSMSLVPAISKAYALGNKSKARKDTKSAVKVTLLIVLPCAFGMASLA
IPIMGLLFPHEPSSVGTILFTLTPCVLFLGLIQTLTGIIQGMGKPIVPVIALCVGMLCKIVISYTLTGIP
DINVLGSAFGTVTAYFVAAMINLLYVKKHMNVNFSKKEFIIKPFITVMTMFIMVKLSYGALVGFLGNSIS
TIIAICVGGIVYVVVILGIGGIKKEEILTMPKGDKLYKLLKKVKLIR
>gi|260688677|ref|YP_003219811.1| stage V sporulation protein T [Clostridium difficile R20291]
MEGLKNMKATGIVRRIDDLGRVVIPKEIRKTLRIREGDPLEIFTAKDGEVILKKYSPIGELNEFSQEYAE
TLAEVLGYGVLITDLDSIIAVSKLPKKDYKEKSISDELEAIISERTVKYSKDKNILPLFKEDQKEYTSQV
IMPIISASGDCIGSIVVVSKDKDTIAESEEKSLKIAANFLGKQVQ
>gi|260688678|ref|YP_003219812.1| putative foldase lipoprotein (late stage protein export lipoprotein) [Clostridium difficile R20291]
MILVVSVTACSSSKGETVATVEGTKISSDEFKKTIALYKDSMEQTYGKDIWDKEVEKGVKYKDKFKDLIL
DQLITTEVIYSQAKKDNLLPKKEDVEKSFKELKDAMGKDEKYKEQLKKLGIDDEFLRDQQEKDLAMQNYQ
SNFAKKTKISDEEMKKYYDTHKDEFKKDEVEASHILLKTVDDNNKPLSDKEKAEAKKKAEEALKEVKSGE
DFAKVAKKYSQDTSASDGGKLGFFSRGQMVAEFEDAAFSMKKGEVSDLVETQYGYHIIKVTDRINEQTSF
EDAKETIKDQLLKNKYQEQIEKLTKEAKVEKDEKVINKITI
>gi|260688679|ref|YP_003219813.1| transcription-repair coupling factor [Clostridium difficile R20291]
MNDVFLYPLQNSKEYKDIINCIKNTKGSLLVNGLLPVQKPHISYSIFNDLSRQMIFITSSDLEAKKVYED
LSFYMEDKVEYLGFQDIYFYHLDAKDRNEEAKKLKVLLKLANKEKIILVTSIEAVLRKYIPKQVLLDSVS
HYKVGDSLDLEKLTEKLVSLGYERVSKIEGFGQFSIRGGIIDVFSLEYTNPIRMELFDDEIDSIRTFDVY
SQKSIDKLQQFSITPSREFIYPEKTTDALVKLKKETTKNTDEGTFQNIDYISSKTYFEGAENYIDYIYPE
ENKSIFTYLADDAIVFINDITRLKERCENYINEFRENYKLNLERGLAIKNQGKLLYHYTDLEYLVKDKSV
VLNSLLPKSINNFSIKSIINFESREVPTFNGKVDLLVEELNRLKYNGYKIILATNTLERANKLGKDLLDK
GLETTISKDRDIEIKSSQVIIVPAHINSGFQYKSIKFVVITDNEMIGVYKRASKTSNKKVKKGKKIESFL
DLSVGDYVVHENSGVGRYTGIEQITVNAIKKDYMKIVYQGGDNLYVPIDQMDKVQKYIGAEVEKVKLNKL
GTNEWTKAKAKVKKEIEDMTKDLIELYAKREKIQGYKFSKDTPWQAEFESLFPYQETEDQLKAIEETKKD
MESSKVMDRLVCGDVGYGKTEVAIRSIFKACMDQKQVAVLVPTTILAQQHYNTFKERFENYPLRVEVLSR
FKTPKQQKQIIEDAKKGLVDILIGTHRIISKDINLPNLGLVVIDEEQRFGVKHKEALKKIKSTVDVLTLS
ATPIPRTLHMSLSGIRDMSVIEEPPQERHPVITYVTESKESVIQDEIERELSRGGQVFFVYNRVEHIEEM
ASMIQKLVPDARVAVAHGRMTSKSLENIILGFLNKDYDVLVCTTIIETGMDISNANTMIIYDADKMGLAQ
LYQLRGRVGRSSRQGYAYLLYEKDKTLSEIAEKRLKAIREFTEFGSGFKIAMRDLEIRGAGNILGSQQHG
HMAVIGYDLYVKMLNDAIKKVKGEPIVEEIDVEIDLSVNAYIPDNYIKDELIKIEMYKKIASIENKEDML
DIQEELEDRFSDIPKPVQTLLTIAYIKSLCKILKIEKIRQLKDEILLVPITKYRTKQKIGYNIVTELEEL
LEKMCKVK
>gi|260688680|ref|YP_003219814.1| peptidyl-tRNA hydrolase [Clostridium difficile R20291]
MYVVVGLGNPGKKYEKTRHNVGFDVIDILAKEYNISVTKIKHKALIGEGRVGTEKVLLVKPQTYMNLSGE
TLIDIYKYYKVDLSNIVVVYDDIDLEVGKIRIRKKGSGGTHNGMKSITKCLGSNDFPRVRVGVSKPEAGQ
DLADFVLSRFRKEESDNINEALEKAADAIDSIIRENIDMSMNKYNG
>gi|260688681|ref|YP_003219815.1| putative type IV prepilin leader peptidase [Clostridium difficile R20291]
MEYIIIISLFFAHLINKSLCVFCDREKKNLYNTFFIYIITVVLSVLIYLKFGISVECVQYMVLIPFLIII
SIVDYYTIYVYDITIVSGIIVQGIIFLAFFNIAQFDYINHIFGLLIGFIIPYIIAKLTKGLGYGDVGLYS
LCCFALGNNYGFYVIVLSFILAFLFFIILYITKIFKDVDIRKQIPFTPFISLSTILIIFTEYNIFNFYYN
LLYKFI
>gi|260688682|ref|YP_003219816.1| putative type IV prepilin leader peptidase [Clostridium difficile R20291]
MDIIIVNLYVFIVGIVFGSFFNVCIFRIPEGISISRPPSHCMSCNTRLKPIDLIPVLSYLMSGRKCRYCY
EKISSRYAIVELITGILFLTVFMLYGISTSTIYYLVLVSLLIIITFIDIDHFIIPDKILIFGAIFSMIFN
LLFKEIPVKDSILGVFICGGSVWIIVLLIEFVIKKECMGGGDIKLFAMLGLYMGVKNGLLTALLSVYVGA
VYGICVIIISRIKGKEYNSVIPYGPFISIGALITILCGKQLLELYFSMVI
>gi|260688683|ref|YP_003219817.1| putative type IV pilus retraction protein (putative twitching mobility protein) [Clostridium difficile R20291]
MYIYDLLEQGIRLNASDIHITVGTNPVARVKGGFVKLSEQILTSEVTMQMAKDIAGESIFKVIEEHGEAD
FSASLKTGERFRVNAYRQKGNYAIAIRTITAEIPTFEKLGLPESIKSFTEKHKGLVLVTGPTGSGKSTTL
ASMINIINEKQQKHIITLEDPIEYVHHHKQSLVNQREVGTDTESFHSALRAILRQDPDVILIGEMRDPET
VSIALTAAETGHLVFSTLHTVGAAKTIDRIVDMFQPSQQQQIKTQLSTVCEGVVSQQLLPTADGKGRIAA
IELMFATPAIKNLIREGKTYQIPNMIQTGVKVGMKTMDQDLMELYKNGKITKDMALSRCTDQEFMTRMIG
GVNYNGYYNR
>gi|260688684|ref|YP_003219818.1| hypothetical protein CDR20291_3343 [Clostridium difficile R20291]
MRKWNKFKSERGAALVLVLIVVALLSIVGLIFSNQIANRIKSTKTTNEGIQAKYLAETCVENSIDKAYEK
LYDELEKMDNEFKSENQEKSISRSKLRNISDEDFNNQDEKNIEAERLGYMNNINFYLNKASSDLEKASME
LKKLYDLDMLDYRDIEYVDANIISHRDSILEICKNYTSGDISKINEYILKEDIDSTTLIEAKLVNNDILL
KMFLEENKIENEHLNSAFSHTYKALDNISLAMQNMIEYRHTFHIDEPKVEVSNGIPDSQQYYELIQNPII
NSMEYIWNSKWDTLENLLEILPNQTQGFNSLRVHLRNNVRKFEKLSDNISSGKKNTAKNFLKYKELLYEI
SDQCNQLKSMSYEKIPVKYDNMALITTFDYIQNELLAEIKCRLKELKPQEIDKTEGITIKIPFYKADYDM
TKEGWPKLKENGSGAELSLMVTGDKDGIKEVEVTDGKKNIIGLGVEENSNSKYKVDAIVNFNLNIDTNVV
GNYDIKDKILINHDISSYKKVN
>gi|260688685|ref|YP_003219819.1| putative type IV pilin [Clostridium difficile R20291]
MSKKNSERGFSLIEVLVAMAIMGIVLFAFFNIINTNNKANTKNDTDITSLNYVQSEIENLREKIKSGEFD
FDSLDKLEDGTVVYEKLIDKSKKVVYDKVLSEGDVSLYDTPYEKITTIKDEDGNLIDKGNITNKIKTIVE
DKSGQIYKIAVTGKSMNDYSSKKEVKIVTEIFKDK
>gi|260688686|ref|YP_003219820.1| putative type IV pilin [Clostridium difficile R20291]
MSLYKNNEKGLTLLEVIIAVFILTIVLSISYKVFNGITSAVKKQQIITDAQVNINLINKYLNRDLENCKE
LTKTGSGNNYEYNIEMPDNVVKYEVSIETKKNTEVYSVTRIQNNTIDTENEVREEIIYNQPLVQNNKEMK
ETPFKIEKQTGKSIYTVSIYYNESVQESHKNSNLNNKTYTFDVMSRIG
>gi|260688687|ref|YP_003219821.1| putative type IV pilus assembly protein [Clostridium difficile R20291]
MNKDIFKKDIKDIFKMEVSLKGILIKVIILLAILSYGYFGLYPQYQKYIATKNSVKQATEKLNIYKEKTA
LMPKYEKQLEEVESELKEKSKNLLYDMQDGLFLIGLDKKMKAYNIDLTSYDVGNVKEYEHFYGISTTISV
RGDYRNVKKLMAYLEEQKNVTQILDYTMTSYIEPEKEEEETTNNKDLIKNVNINKDTKIYWVEGENKWHL
YKDCPLIKEGEILKNDKLLDRSTNYLCNTCVLRAATEKEAKKEVVAPKAEGVVDATFKFIMYTKENTTMI
LDTDNPSSWRPGKYNPFKSSAK
>gi|260688688|ref|YP_003219822.1| putaive membrane protein [Clostridium difficile R20291]
MNKVYVSYYGDSISIVEGRYKHDKDKFYVKNFNVFSIEDIAQDFSKEKYALLRYALENVKLKSRHVVFCL
NTRDVILKPQKLPNMDKKDLDGFMKLEMDEMMALESDEYVFSYEVSSETHDNSDGDESSLNLIIGAIQKE
EVNAIVEIMHEFDLVLDRIDTLSTAYLRMLKNLDYNDIMVTNISDNSTIINIYKKDTLFISDNIPIKITA
KDMDMQLLNVVEESKGLMNYYSSRNFGKVTDTILILGKRYSNKLIYETFSSAFSSYVSQGLTEIMDISDM
ITGDIDEDDINSIVELLGSMIEPKGKRDFENINFLPMDILRKQIKAKQMKNILKIAPIVILILAIPYLCL
IFSNNLANKELENVNGEIRNIESAYYQIGNIEKMIQSKSEEIKVYDMLIGKKVKWENLLDDIDKNTPSKV
ELTSLSTTYQNLGTNNKADNSKSNKTTTDKSSNNETKSSTKSDSNGDKTDNDLNEDKTTNVSEALTGNSE
TNSNNTDKDDKTPLYDKIPNVINIEGNAKDSSYVGQFLYKLKGLYYFKDVKLHSIKSNAEDSNYTFSMTL
YLKEGVLTNE
>gi|260688689|ref|YP_003219823.1| type IV pilus assembly protein [Clostridium difficile R20291]
MKSFKYTVIKEDGKKQTDVIEANDFNEARNLLRKRNLRVIEIKESKNKNIRLSSRKRKKDLGADQISHFC
RQFAIIVSSGINSISGLETLARRSTNITLREEINRIVAEIKVGSTIADSMLSSKSKFPKLLGAMVATGEA
TGKLDEVLKSMASFYASEHRVKQKLRNAATYPLIVLISSFIMIFIFTTFMVPKMINSITTVGATLPLITR
IVMGFGMFMKKFWIIVLLVIILFIYQFKKYLKTSVGRAHKDRVINKIPVLGKGINCMVATRFSRALYLFV
STGYPLVQGLDYIIDSVNNTMAEKILASAKDGITRGEGLAENLERYTYFDSVLVQMIAIGEQTGELENIS
RQMAEFYEYESEIYLNRMASMIEPVLIIAVGIIVAILVVSIFMPMLSIYDAM
>gi|260688690|ref|YP_003219824.1| type IV pilus assembly protein [Clostridium difficile R20291]
MKPVAKKVRIGDKLVEKGYITEDQLKWALSEQKNSGKRLGEFLVQEGLIDSNLLISVLKELLDIESIFLE
GTEIDTLATKMVPENICKRYTVFPFKIDGNKICLAMSDPQDREAVQDVRRMSGKDVEIFISSTEDINKAI
GHAYAHSEINKAMTEYNKNRTGGVRETVILEEDVNAAPIVRLVNNILENAVRMEASDIHIEQSENYMRVR
FRIDGMLREYMRMNSAPYKAVISRIKIMSDINISEKRIPQDGRIYLKVDNKPIDFRVSTMPTNRDEKIAM
RVLDKSNFMVSKEVLGIDEHGSKIYDELINTPYGLILVVGPTGSGKTTTLYSMLNQLNTENRNLLTIEDP
IEYELPGVNQSQINEKAGLTFASGLRAFMRQDPDIIMVGEIRDTETAEIAIRASLTGHLVLSTLHANTAV
GAISRLLDMDVESFLITSSVLGVISQRLTRKICEHCKVSYEADIGEKKALGIDVNESVTIYRGKGCERCN
NTGYKGRLGIFEMLEITPEIKELIDSSANQREILKMARKQGMVSLKEDIVKKVLNGKTTVEEMIRIILMT
D
>gi|260688691|ref|YP_003219825.1| pilin [Clostridium difficile R20291]
MKLKKNKKGFTLVELLVVIAIIGILAVVAVPALFSNINKAKVASVESDYSSVKSAALSYYSDTNKIPVTP
DGQTGLSVLETYMESLPDKADIGGKYKLIKVGNKLVLQIGTNDEGVTLTEAQSAKLLSDIGENKIYTSVT
ADNLGNPLTSNTKVDNKVLYIVLIDNTVMDSTK
>gi|260688692|ref|YP_003219826.1| ribose-phosphate pyrophosphokinase [Clostridium difficile R20291]
MNTSGSEIKIIAGNSSKELAQKIADYIGVSVLDCEVGTFSDGEICVNMNETVRGCDVFVVQSTNSPVNDN
LMELLILIDALKRASAGRITAVIPYYGYARQDRKAKARDPITAKLVANLITAAGADRVLTMDLHAAQIQG
YFDIPLDHLLGGTILANYFNEKKIEDLVVVSPDLGSVTRSRKFANTLNGEVPIAIIDKRRPKANVCEVMN
LIGDVKGKNVILLDDMIDTAGTIVNAANALKEFGAKDVYACCTHGVLSGPAIERIANSEISELIVLDTIQ
LPEEKRIDKIKIKTVAPLFGDAIRMIFSNESVSKLF
>gi|260688693|ref|YP_003219827.1| bifunctional protein [includes: UDP-N-acetylglucosamine pyrophosphorylase and glucosamine-1-phosphate N-acetyltransferase] [Clostridium difficile R20291]
MNFKAIILAAGKGTRMKSKYPKVIHKVCGKEMVNHIIDVSKKSGVKDTVVILGHEAEVVKEKLAEEIIIA
MQTEQLGTGHAVKMAKEYINDEDTIVVLCGDTPLIKEETLKRLFEYHIENKYHATVLTTRVGNPTGYGRI
IRDKKGDLLKIVEQKDANSEEKMISEINSGIYCFNGKSLREALDLLNNNNSQGEYYLTDTAKIMRDKGLK
VGAFAGSTIEELMGVNSRVELSKAEEIMRRRINESHMVNGVTIIDTNSTYIESDVMIGNDTIIYPGVMLQ
GKTRIGSDCIIGMNSSITNSEIGDGTEIKNSTIIDSKVGENSNVGPYAYLRPKSDLGNNVKIGDFVEVKN
AIIEDGSKASHLSYIGDAHVGKNVNIGCGVVFVNYDGKNKFKSVVKDNAFIGSNSNLVAPVVVEEKGYIA
TGSTITHDVPDGALAIARERQVIKEGWVEKKNQKDDQSK
>gi|260688694|ref|YP_003219828.1| stage V sporulation protein G [Clostridium difficile R20291]
MKITDVRVRKLTEEGKMKCIVSITFDNLFVVHDIKVIEGHNGLFIAMPSRKVGEGNFRDIAHPINAEMRQ
VLEDAVLQAYHEALVQWEVAAE
>gi|260688695|ref|YP_003219829.1| putative transcriptional repressor [Clostridium difficile R20291]
MKFKRTERIGAIVKILSDNPNKIYTLSYFTNQFNAAKSTISEDLLVVKNVFEKLHLGKVITISGAAGGVK
YIPKTSIAENAEFLMELCERICDKSRILSGGFLYLIDLIYDPTIAAKIGKIFASNIEYVDADYVVTMETK
GIPMALMTAKAMNLPLVIIRKDIKVSEGPTLSMTYVSGNSSKVESMSLPRKALKPDSKVIIIDDFMRGGG
TIKGMVDLMNEFGAEVIGTGVFISTTNPSEKMVKDYISLIQLDVNGDKIVVEPNLKTFKDEYRNEDLDEE
EDSEFEFEIDED
>gi|260688696|ref|YP_003219830.1| UDP-N-acetylmuramate--L-alanine ligase [Clostridium difficile R20291]
MNIHFIGIGGISMSALAEICINKGYQVSGSDSNESYLLDKLRDQGATIYIGQKKDNISDDVNMVVYTAAV
HPDNEELVAAKEKNKLVMNRATFLGQIMREYKNSIAVSGTHGKTSTTSMLSTIFEYADLDPTILVGGNLS
MIGGNVKIGNSNHFITEACEYVDSFLNFNPKISIVLNVEEDHLDYFSGIDEIKASFNKFGKLLPPEGYFI
INGDDENIDDILYDVKATIIKYGRDSDNDAVIKDIHFDNSGHGIFRIEYEGRDLGEFELSVYGLHNIYNA
SSAIMAALVSGIDLETIRKNIKIYKGVGRRFETKGYYKNALVVDDYAHHPTELKATLAAAKKLKKSTLWC
IFQPHTYTRTKSLLGEFSEAFYAADKVIITDIYAAREKDPGDIHSKDLVEKLYQNNVDAIYIKEFEDIVK
YLRENVKDNDLVITAGAGPIYKVADLLVEK
>gi|260688697|ref|YP_003219831.1| hypothetical protein CDR20291_3356 [Clostridium difficile R20291]
MSKKRKLKKKAAILIGVVVFFIIYFISFRIGINMEKDKSEVPKKVEKEEEDNRSLRTQIKEKKKVYISDK
NIENIKIEEDMWDEIKLFFSDFKKVRNTTSSYEAVYEGYSDDGVKFSTDLNFFRVYTVNKEEYYKVPVSS
KDAFKKLLDESIYTSFDLLSHYKDWKEVTITHGKEIKKVHRWKFDDLAHKMISKRVVGKVQPEKSKERSD
YNFTINIKGDNFDVKVDTMGKDYVKVTSKKNVSYYEVHTSLFDYLKNEIFEIGKK
>gi|260688698|ref|YP_003219832.1| putative cation efflux protein [Clostridium difficile R20291]
MFRCRFLIIFRLFHKGGINMETRYEEANKITIQSILWNVVLTIIKVIAGVIGNSSAMIADGLHSASDIIS
SIGVLIGNYVSSRPGDREHNYGHEKAETLVSFVLSILLIFVSITIGIEAIKSLFNLDALSVPSILPLVVS
VISILIKEYQYRITIKVAKKINSPALKADAWHHRSDALSSVAAFIGIGGSILGFKPLDPIASIVVAIFVA
KVGISILISSVNELMDVSVDEEEIKELKFIVADTEGVKNLGDIKTRKHGAMAYVDLTICVDENLTVKQGH
DIATKLEKHIIKHMEFVKGITVHVEPCTNCQGNKCNN
>gi|260688699|ref|YP_003219833.1| putative peptidase [Clostridium difficile R20291]
MIIFKYYTTIYLEIPIILWRKIMINEQRILNEFLELVQIDSLSLKEGNVAKVLVKKLEEIGCSVVIDNAG
EKANGETGNIIATLKGNKEGKKILFSSHMDTVTPGIGVKPIVDEANGIIKSDGTTILGSDDKAGIAAILE
GLRYINENNIEHTDIQVVFSICEECGLVGAKNLDYGKIDSEYAFILDSGGSPGEIIVKAPAQDVINVKIL
GKTAHAGLEPEAGISAIMVAARAIENMNLLRIDEETTANIGIINGGTATNIVTGEVNIVAEARSLKENKL
DVQTKHMVETFEKAAKDFGAQIEIDVNRAYTPIDVSEDSEIIKLAKKAFSNLGIEGHTESTGGGSDTNIL
SKNGIEAITLGIGMKNAHTLSEHIAIKDLYDSAKMVVEIIKEA
>gi|260688700|ref|YP_003219834.1| hypothetical protein CDR20291_3359 [Clostridium difficile R20291]
MGSKRKFKRDYIILEAKDINFRYKERVLPKAFAKVEVNDEKAIIALYVENLKYVKDGYKAVAIKDDHGLI
DLGNIILNEQGRGEFVLDLEDSDDEIKGIALLYERNIPLIGFKGNKLENYEDILFQEVEEEEYEEYEEYE
ELEEDEEIEDNEESDRDEDSEEEYIIEEYDEDEYEDYWEDDEDIEEGELKARTEVEDSGDEEIEEFNNYK
EIENYNRVKVQEEYIDIEYDEEEEEEEEVFEVNREEDRFVSSKPTKSKKVQKDQNNIEKIKRANGVSQGE
SGNKQTSTLLMPRQIKKGLKLFKEVKPFVTDYIDKTRWWKIEINPTTLCGYTMPYLGYLNVLNYTMYSDA
VLHSYKYRHYLFGVQYDEYNKRKHYIYAIPGNRNEQPDNGSTGFLRYQACDNRTNSLGYWLCFIDSRQRN
IVR
>gi|260688701|ref|YP_003219835.1| dimethyladenosine transferase [Clostridium difficile R20291]
MDRLSSHNATKEVVQKYNFKFSKSLGQNFLIDSNIIDKILSGARITRGDNIIEVGPGIGTLTREMGKIAE
KVVAIEIDRNLIPILKDTLSDLDNTEVVNQDILKVDIQELVKDKLNGGPVKLVANLPYYITTPIVMKFLE
EDIPVTDIVVMVQKEVADRMNAIPGTKDYGALSIAVQYYCDTEIVAKAPRHMFIPQPNVDSTVIGLHVRD
KRKYDVHNEDIFFKTVKASFGQRRKTLLNSLGGLGFLNKDEIREILKEANIDEKRRGETLSIEEFSVLSN
IINTKVSSK
>gi|260688702|ref|YP_003219836.1| putative DNA-binding protein [Clostridium difficile R20291]
MIKEIIVVEGRDDVTAVKRAIDAELITTGGFGFPKGVMQRIKAANERRGVIIFTDPDFAGEKIRKKIASE
VPGCKHAFLPREEAKKDGDIGIENATPQSIIAALNKVRTENTEKRDEFKQVDLIRNGLIGNEEASLRRDA
LGKILGIGYGNAKQFLNRLNNYGVEREEFIDALKQI
>gi|260688703|ref|YP_003219837.1| putative iron ABC transporter, solute-binding protein [Clostridium difficile R20291]
MKFKKLVSLGILSTLLLSVITGCSNVSSGSNLKSNNKTKGELTVYTAIEEDSIDTYLATFKEKYPDIKLN
VLRLSVGGITARLLAEKDNPKADVLWGVAATSLIILDDKEMLEPYAPKGFDKVNPAFKDDKKVPSWVGID
AWMTGITVNTKELKAKNISAPNSYEDLIKPEYKDLISMPSPASSGTGYLTVSELIQIMGEEKAWQYMDKL
HKNIGVYTQSGSAPAILAASGEYPIGISFGNRGIKLKGEGYPVEVVFPKEGSGWEIESNALVKKDNIKEA
SKVFLDWAISKDAMNEYSKNFAVTTIDTGNPVPEGFPKNPLEQMIDNDLKSAARNREAILNKWIEKYDGK
TEKES
>gi|260688704|ref|YP_003219838.1| putative iron ABC transporter, solute-binding lipoprotein [Clostridium difficile R20291]
MAAKRCCIGEEKMKFKKLVSLGVLSTLLLSVITGCSTDSSGSDSKSDSKTKGDLTVYTAIEEDSIEPYLA
TFKEKYPDIKLNIVRASTGDITARLLAEKDNPQADVVWGVAATSLLVADDQGMLEPYAPKGSEEIESAFK
DDKEVPSWVGIDAWMTGITVNTKELSDKNIPVPSSYEDLIKPEYKGLISMPNPSSSGTGYLTVSALIQIM
GEEKAWQYMDKLHENIGVYTQSGSAPATSAASGEYPIGISFGYRGIKLKEEGYPVEVVFPKEGSGWDIEA
NALVKKDNIKEASKVFLDWAISKDAMNEYSKNYAVTTISTGNPIPEGFPKKPLEQMIDNDLKSAAKNRED
ILNKWISKYDGKTEKES
>gi|260688705|ref|YP_003219839.1| putative iron ABC transporter, permease protein [Clostridium difficile R20291]
MITSKNKRRISDSTIQKYFLIFSVIVLIVFILFPLVSLLKNAFMDTSGNFIGISNFSKYVENPSLIASFK
NSIFVSTVSSLISLCLAFIYSYAITRTNIKFKDFFKTMGMFPLFAPTMLYGISLIYLFGNKGIFTTMGLE
VPLYGPLGIIISQILFTFPQAFLILSVALSMADYRLYEAADSLGASEFKKFCKITIPGIKYSLLSSFFVS
FILAFTDFGAAKVVGGNYNVLATDIYKQVVGQFNIPMGATVSMVMLIPVLIAFTLDKMASKKQGMTITAK
SMPYKIKENKFRDRVFLIVCSFITLLIFILIFVSVIGSVIKLWPYNLSFTMEHYTFKGILGSGIKTYLSS
LKISTLTAIFGTIFVFFSAYIIEKVDKFPKLRQTAYLLSMIPMALPGLVLGISYITFFNSASNPLNFLYG
STAILVIVNVVHFYSVCFITSNSSLKMLDKEYELVAKSINIPFYKVFFNITVPMSITSILEIVVYYFVNS
MVTVSALIFLYIPQTQTASISILKLDEIGYIGPSAAMAVLVLLTNIIVRLLYEFVTKKLKNNTQKWQQKD
VA
>gi|260688706|ref|YP_003219840.1| putative iron ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MSFLQVKNVGKSYGQVKVLKDISIDIEKGEFICLLGPSGCGKSTLLRIIAGLEDKHGGKIIINDKDMTNS
PPESRNFGIVFQSYALFPNMNVYKNIAFGLENKNISKSNIDKKVKEVLDVVELSGYEKKYPSQLSGGQQQ
RVALARAIALEPDFLLLDEPLSALDAKVRLKLREQIRSLHRKLGITTIMVTHDQEEALCLADKMVVMNRG
EIIQVGTPKEVYKNPETPFVADFIGTINFIDDGINKIAIRPEDIKVESNRDSKDKDIKVGEILDIEFRGF
NYRITVEYRSKQMKLDVVSKVAEQMKLCIGSKINFKIPKEGIVQYKSEGCA
>gi|260688707|ref|YP_003219841.1| putative phophoesterase [Clostridium difficile R20291]
MLTELHCHTSISDNNFTTEEIIKKAAEKNINILAITNHDTLSGLDEALVLGEHYGITIIPGIEISAYDYK
NRKRVHILGYNIDLNSQEIKNLCNPMVCDRHKASVKMVNKIIDLGYKISLEDVKKYSSKTGIFKQHIMKA
LIDKGYTDNIYSSLYKELFHRGNGKVYVSLKYVDYRDAIKAIKNSGGICVLAHPGQMDNFSAIEEMVKVG
LDGIEVYHPSHNKELEKESLSYAKKYNLVVTGGSDYHGFYSQHNYELGSKSLNKEDLFKFRLALGGVL
>gi|260688708|ref|YP_003219842.1| putative amidohydrolase [Clostridium difficile R20291]
MIKLIHNANIVLEDMILENGHLIIEGDTIKKVSNDRIDYAFDFNEIDEIIDAKNLYVIPGIIDIHSDAIE
KEIEPRPSTLLPFNMAFYELDKKLPANGITTVYHSISLGDGVGVRSIDNSLKMIKNIDSYKNIDSKSINH
KVHLRYEVLYYEGLEKVLELLDENKIDYLSIMDHSPGQGQYTNPTFYKEYATKVWGVTENYVDTWLDDLV
NLHDNLDWNKIANIIGIAKTKNINVASHDDDTLEKMDFIKNIGINVSEFPITLEVAKHSKKLGVLTCLGA
PNIVRGKSHNNNLKAMDAILEDCCDIVCSDYLPSAMIKSMCIVAERINNLNKAVSLFTSNPAKAVGIYDE
RGSIKENKKADLVLVDIDSEYPKVLNTIVNGKTVYKREV
>gi|260688709|ref|YP_003219843.1| phosphonate ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MGVFNKMKETILEVNNFSKDFELHALNKTITACSNISFEVSKGEFLGIIGKSGAGKSTILKSIYKTYIPT
TGEIIFNSEIYGNVDLAKIGDREMINLRKKEIGYVSQFLKTLPRITAIELVVHSLIESGFEKDCSYDMAK
DILNQFEIKENLWDAYPNNFSGGEKLRLNLAQAMVKKPRLLLLDEPTASLDNQSKIYVKEKMLELKSQGT
TMIGIFHDIEFMETVIDKTFTMAKGTISESGVA
>gi|260688710|ref|YP_003219844.1| phosphonate ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MSKINVSKRLENIDKQVLIGRNINLIYGDGCEKCFESTGYESNNICKYCGSIVACNNVNLELYEGEVLGI
VGESGSGKSTLLKILFFQEHANSGEVYISHYNKDTNILELSDQKKRYIKNHFMGIVYQNPHLGLNLDFSS
GGNIAEKLLMANLYNVEKIRDRGKELLIKTNIPVERIDHKPKYFSGGMQQRVQIAKALSNNPPILLLDEV
TTGLDVSVQAEVLDLIREIQRELKISMIVVSHDFDVIKMLADRTIVMKNGSVIESGLTDQIMEDPQHPYT
QQLINSLL
>gi|260688711|ref|YP_003219845.1| putative phosphonate metabolism protein [Clostridium difficile R20291]
MIYNYGFLDENTKKEIRRKILKAISIPGYQVPFGSRELPIAKGWGTGGLQLTLSLIGKNDVVKVIDQGSD
DSTNACNIRSFIASVSNVETTKDTLEATLIQTRHRIPEEKLKSNQILIFQVPIPETLRIVEPSEVETRRM
HSEEDYSRMWVYLYEDIVRFNDISIAVEYPCKVNDRYLMNPSPIPRFDIKKLNMSDNLFLFGAGREKRIY
AIPPYTKVEPLEFEDYKFEEEKFEGKYCSLCNSTNTFLDEVYDSDTNEKYYSCSDTSYCEKVRLKNNSID
VTIGGTWNE
>gi|260688712|ref|YP_003219846.1| putative phosphonate metabolism protein [Clostridium difficile R20291]
MAYVAVKGGEEAILQAKNILEFYRVKGDSLPIDVKQIEEQMSYAVDKVMSEGSLYNKELSALAIKQAQGD
ILEASFYVRALRSTMPRITYSEPINTEEMRIKRRISATFKDIPGGQYLGATRDYENRILNVELLEEDEKK
NRDFRDSFINELETVDEIPEFTKISNIFRKENLLQEEVCENKLEEVIDDITRNSLRFPVSRSAKLQALTR
GESGVVSGFAYAIVRGFGDEHPYISELRTGNVFIKVKHPIYEDEEIIIGDMLVTECEIVSKASQNKTENS
KTNSEDKNKMSLGYGLCMGNNENKAISMAILDKSLEPNSEKLAQDEEFVLLHIDGIDSLGFISHFKLPHY
VDFKADVERIK
>gi|260688713|ref|YP_003219847.1| putative phosphonate metabolism protein [Clostridium difficile R20291]
MVNYTQEIYRKMLDSASFPGKLNNIDNINIENNTKLLNGAIGIAITLLDQEVTFYIENYTQKDIKNIRAL
TVSNQIDYRKSDYIFLDINSEVDILQIKIGSFEYPDESATIVHQVNDLSTYSQTKYIKLDLSGPGIKSKN
SIYINGIREEFIERLSTINKDYPIGIDLILVDKKGEIAFIPRSSKLSWEVL
>gi|260688714|ref|YP_003219848.1| putative phosphonate metabolism protein [Clostridium difficile R20291]
MYTVDSTKILINMNLEKLEKIYSMIKDTSSISIIKEPNLATVMVRANESVKNTTFNLGEILVTECSVKVD
ESLGYGIVSENNNKKAIYLAVIDAVLHSNNSKFDELKNYINKSVYEENLRYEQEIIDEFSLINKTKVQFN
AMD
>gi|260688715|ref|YP_003219849.1| putative deoxyribonuclease [Clostridium difficile R20291]
MLFDSHAHLNDESFDEDRDELIGSLKDKGVDLVVNPGADIETSITAIELAKKYDFIYSAVGVHPHDVSKL
DDTAIETLRKLATENEKVVAIGEIGLDYYYDYSPREEQKEWFKKQIELANELKLPIIIHDRDAHGDTFEI
IKNTKNPEIGCVLHCYSGNVELAREYVKMGCYISIPGTVTFKNNKKTREVVREIPLERLFIETDSPYMSP
EPHRGKRNNPSQVSFVADKIAQEKGICYEEVCRVTKENAKKFFNIK
>gi|260688716|ref|YP_003219850.1| methionyl-tRNA synthetase [Clostridium difficile R20291]
MSKPSFYVTTPIYYPSGGLHIGHTYSTVAADTIARFKRFCGYDVKFLTGTDEHGEKIQKKAIEQGMSEIE
YLDGMIKDIKALWNTMDISYDDFIRTTEKRHTDIIQKIFTKLYEQGDIYKGEYEGRYCTPCESFWTESQL
LEGNKCPDCGRETYLVKEESYFFRLSKYEDRLKELFKDDSFCFPAARKNEMVANFLDKGLEDLSVTRTTF
DWGIKVPFDEKHVIYVWVDALCNYITALGYMTDNDEEFKKYWPANVQIVGKEIVRFHTIIWPALLMALGL
EVPKQVFGHGWILFADDKMSKSKGNVVYPEPIIERYGIDTLKYFLLREFAFGQDGSYTHRNFVTRINYDL
ANDLGNLISRTVAMVEKYNNGIIPTAKVSTDFDADLKEQAVSTRENFEAEMDKMQFHEALESVWKLVRRT
NKYIDETMPWALAKDETKKDELDTVLYNLCESIRIIATLINPIMNETANKIYEHIGIKGQDDITTWESTK
TFGLIGENVKVFKGEPLFPRLDVEKEIEELTKMFSGKPPVEEKPLEHKEEITIDDLDKIELRVGKIISCE
KHPKANKLLVSQVKIGPETRQIVSGIAEYYKPEDLVGKEVTVVCNLKPVKLRGVESQGMILAAGDDGDPY
VLPFTQGAKDGCEVR
>gi|260688717|ref|YP_003219851.1| spore maturation protein B [Clostridium difficile R20291]
MEIFSNLLIPIIILYIVVYGKYKKIDVYDSFVKGAIDGLKAAWDILPYIIGIFLAIGIFKTGKGLDMLEW
LFTPIANMMSIPKELIGLISVKPLSGSGALGMYSELANRVGIGSLVEKMGATIVGSSETIFYTMAIYYGS
LKIKNTRHTLSCAMISHVAGVIAAVFICYVIFV
>gi|260688718|ref|YP_003219852.1| spore maturation protein A [Clostridium difficile R20291]
MIIIGKIWFYMVSIGIIGSLISKNMGELNKVILSETSKGIEFAISLAGIMALWMGIMNIAKESGLIEKIG
QKLNPIMRRLFPSIPKGHKAMSYIVMNIALNMLGAGNGATAFGLKAMSELQTLNNKKDTATNDMIMFMVI
NISSIQIIPFTIIKLRMDMGAQNPSEIIFTTLFATIISTAVAIITCKFFQRRYR
>gi|260688719|ref|YP_003219853.1| putative nicotinate phosphribosyltransferase [Clostridium difficile R20291]
MRNLTLLTDLYQLTMLNGYFEKNIHEDIVVFDMFFRKNACDGGYTIVCGIDQVVEYIDNLHFSDEDLEYL
KNLNLFSDKFLKFLKEFKFTGDIYAVEEGTIMFPNEPLITVKAPLYQAQLIETALLTIVNFQSLIATKAS
RVCFAAQGDPVFEFGLRRAQGPDAGIYGARAAVVGGCAGTANVLAGKMFDIPIIGTQAHSWVQKFDNELE
AFQAYADVYPDKCLLLVDTYDVLNSGVPNAIKVFKNISEKGYKPMGIRLDSGDLAYLSKEAKKQLDNAGF
SDISITASNDLDEYTITSLKAEGATINSWGVGTKLITSFDSPSLGGVYKLAASCEKGVLEPKIKISENPE
KINNPGYKKVIRIYNEDNKAEADLIMLHDEVIDESKPLEIFHPTYTWKTKVFTNYKVKELLKPLYIKGRC
KYNKKAVLEIKNHVQYELSTIWEQYKRLSKPHIYKVDLSRNLWYLKTQMIDSKKVL
>gi|260688720|ref|YP_003219854.1| AsnC-family transcriptional regulator [Clostridium difficile R20291]
MDVTDYRIIEILQDDGRISMKDLGKIVGLTSPAVSERVKRLEESGVIEGYKAIVNPDSLGRVIKAFIHIS
LPSNGYTEFIESAAKDPRIVECHHITGDDCLLLKVIVKDMYELENVIDTIKKIGSTKTSVILSTPIQAKS
IL
>gi|260688721|ref|YP_003219855.1| hypothetical protein CDR20291_3380 [Clostridium difficile R20291]
MEIGKIIIESLKREDTHKIFIELDNKHELEKIIPKISCMKSVGECKYHVVNCFEHSINALKELEIVLNDK
DFFPIHLRKHVSNYLNTYIEEGINKLHVLKLGTFLHDIGKPDSMTLDETGRVHFTNHEKIGAQIIDNMGI
KLELSTETYRLISKYVRYHMILLSLYKKNDLSRKELINVFNLVDEDTIGVIMLGYADIVSTVKLLGKSGE
VSVLKTYMEYILTNYLYKSNYTHV
>gi|260688722|ref|YP_003219856.1| putative corrin/porphyrin methyltransferase [Clostridium difficile R20291]
MSGKLYICPTPIGNLEDITYRTLRTLKEVDLIAAEDTRHSIKLLNHFEISKPLTSYHEHNKDSKGDYLIN
KLIDGENIALISDAGMPGISDPGEEIIKQAIQNNIEIEVLPGATAFVTALVGSGMDTHRFVFEGFLDRDK
KVRKAQLEELKEESRTIIFYESPHRLKDTLKDMLKILGNRNISINRELTKKYQEIIRENIETTIKIFEEK
EVRGEFVLIVEGFHGEKSKKENYDGLTDREYVLKLIESGMNKKDAIKIVCKDRKLKKDVVYKQVLDL
>gi|260688723|ref|YP_003219857.1| hypothetical protein CDR20291_3382 [Clostridium difficile R20291]
MQLKDSERIDDLQLKGLKIIQDTNGFCFGIDAVLLANFTKIKKDAKVVDLGTGTGIIPILIAGKSEAKKI
IGVEIQEDVYEMATRSIKLNGLEERVEIINEDIKYIDKVLDINGYHVVTSNPPYMHIDGIKNPNDKKAIS
RHEVRCNLEDVIRASSRLVMPRGKFFMIHRPTRLVDIITLGRKYKLEPKVIQFVHPRPQKAPNLVLVQFV
KDGRPELKILDPLYVYGEDGNYTKELKAIYNNKDIGEL
>gi|260688724|ref|YP_003219858.1| putative signal peptidase II [Clostridium difficile R20291]
MIKIVGIRFKSAGKIYYFDPVDFNIEQDMDVVVETARGLEYGKVVVGPKDMDESELVSPLKPIIRIATEE
DKKVYLENKEKAKETFELCQQKIKEHELTMFLIDCEYTFDRNKLIFYFTAEGRIDFRELVKDLAAIFKTR
IELRQIGVRDEAKSIGGLGPCGRKLCCSSWLGDFQPVSIKMAKDQSLSLNPTKISGICGRLFCCLKYEHD
VYSEAIEKMPVVGALVQSDDGKGKVVEVNPLLEQIKVEFQDKTVKIYTREDIKILREPKKCDGCGGKCKD
NDGLDEATLRELKKLED
>gi|260688725|ref|YP_003219859.1| putative DNA polymerase III, delta' subunit [Clostridium difficile R20291]
MYFENIIGQDFAKKYLTNSIKKNKLNNAYMFEGMDGIGKKKFADELSKLLLDYENLENSPDYVLIKPDGN
SIKIAQIRNLQSDIVIRPHKDYKIYIINNAEKMTVEAQNALLKTLEEPPNYAIIILVTNNKESLLETIKS
RCDIIKFSPIPIEDLKRYLINTGIEEERAQLLAIFSRGSIENALNLSQSSEFSMMREDIQQYIQIMLDKN
IVEILNIPNNMEKYRGKIIALLDMMINYFRDIILLKENVNKNMLINVDKLVFIQNMSGKISYSQLSKIID
IIEDAKSKIKSNCNFNISIQVMSLNIYEVIK
>gi|260688726|ref|YP_003219860.1| putative thymidylate kinase [Clostridium difficile R20291]
MEDMKMKGKLIIIESGSDASGKATQTEILYERLKKEGYMIKKVEYPNYESPSSALVKMYLKGDFGKNASD
VDPYIASTFFTADRYASFKTDWEEFYNEGGIIIADRYTTSNMVHQASKMDICDREEYLNWLADYEFNLFK
IPQPDCVIFLDVPIEFSKKLMENRKNKITGEEKKDIHESDIEYLEKSYNNALYIADKYDWKKINCVLDNK
LRSIESIHNEIYKIVLDSIKPMER
>gi|260688727|ref|YP_003219861.1| putative arginine decarboxylase [Clostridium difficile R20291]
MFIINELNKIVNEEVISFHMPGHKKGQVYKKLGYKDILKNLYKMDTTEILGTDNLHFPEGIIKNSQKKAS
RVFKSDYTCYLVNGSSCGIQSAIMSVCSPKSKIITNRDCHQSVINGCILGDIDIEYVPCEISEETNVLKG
ISISNVIDIIDKNLDAKAVLLTYPTYYGMTYDLEYICNYAHSKKMVVIVDEAHGAHLGLSERLPKTALEQ
GADIVVQSTHKTLPAFTQSSMIHIQGDRVDIDKILNMLRITESSSPSYLLLSSLELAVDIYENKGKELME
ELLNNIRIFKDKVDSNINIYDTNDKTKIFISSKNMGLTGYELENILRNKYNIQVELSNYYGVLLICTIGN
TAEDFSSLETALNNVVKEDFKFEKLENKKYPVVIPKKILTPREAFYKTKKSVKIYDSIGKICGECIVPYP
PGISVISPGEVISKEIIDYLMFCHSKGMIVSGLKDVDLNFIQVIDLEDI
>gi|260688728|ref|YP_003219862.1| hypothetical protein CDR20291_3387 [Clostridium difficile R20291]
MKKVALILAIIGALNWGAIGILGTDLIGSIFGGTYEMVSRIIYFIVGLAGLYLIPSLMSDDRE
>gi|260688729|ref|YP_003219863.1| hypothetical protein CDR20291_3388 [Clostridium difficile R20291]
MKIFRIIYEKVKRIIYENTIYKKLLGECLMFQVINFLCLFCVGFLVLDVMIYFCKDAMDIFEGTTNVNKV
KSINIWADRVRANSYSYENKIAK
>gi|260688730|ref|YP_003219864.1| lysyl-tRNA synthetase [Clostridium difficile R20291]
MKNNQQSNEEAQIQEDLSEVLQVRRDKLKKLQESGRDPFKESRYDRTHYSMDIKDNFDSLEGKTTKIAGR
IMSKRIQGKAGFIDIQDQEGRIQSYVRLDAIGEEEYSVFSTYDIGDIVGIEGEIFKTKKGEISVKAKSVV
LLCKSLQVLPEKYHGLKDQELRYRQRYVDLIVNPEVKNAFLIRTKALKALRAYLDDRGFLEVETPILNTI
AGGANARPFITNHNTLHIPMYLRIANELYLKRLIVGGFDKVYEMGRMFRNEGMDLKHNPEYTAIELYQAY
ADYTDMMEITENVIAHMAEVATGSMIVNYQGTEINFTPPWKRMSMEDCVKEYSGVDFSTINTDEEALEVA
REKGIEIKPGMRRGEVINAFFEEFGEDKLIQPTFITHHPVEVSPLSKRNVEDPRRTDRFEAFANKWELAN
AFSELNDPIDQKGRFIDQLRKRELGDDEAFEMDEDFLKALEVGLPPTGGLGIGIDRVIMLLTNSPSIRDV
LLFPTMKPIDNNPNKEEEN
>gi|260688731|ref|YP_003219865.1| transcription elongation factor grea [Clostridium difficile R20291]
MEENKEFLLTQEGYDKLEEELENLKVVKRKEVAERIKVAISFGDLSENAEYDEAKKEQAQVEERILKLEN
MVRKAVIIDESKIDLNVVTIGSIVKVKDLEFDEEVEYTIVGSTEADPYDGKISNESPVGKALLGRAAKEV
VEVQVPDGVAKFEILEIRR
>gi|260688732|ref|YP_003219866.1| tRNA-dihydrouridine synthase [Clostridium difficile R20291]
MKIGNLELKNKVFLSPMAGVTDLPFRLICKEQGCGLLYTEMINGKALCYDDENTKKMLKIEEEEHPVAVQ
IFGSEPEFMGRAAEIMNDYSNEILDINMGCPAPKVVKNGDGSALMKNPKLAEEVLRAVVKNSKKPVTLKI
RKGWDDNSVNAVEIAKIAEDCGISALAIHGRTREQFYTGKADWDIIAEIKKNLSIPVIGNGDVFTIEDSI
NMLDKTGCDAIMIGRGAQGNPWIFKRINHYMNTGEILPEPTLNEKISTAIKHLKLAVEEHGEYVAVREMR
KHIAWYLKGLRNSAKLRDEINKIEDYQEVVSKLEYYMEDSLT
>gi|260688733|ref|YP_003219867.1| hypothetical protein CDR20291_3392 [Clostridium difficile R20291]
MLLVFDVGNTNMVLGIYKGDKLVNYWRIKTDREKTSDEYGILISNLFDYDNVNISDIDDVIISSVVPNVM
HSLENFCIKYCKKQPLIVGPGIKTGLNIKYDNPKQVGADRIVNAVAGIEKYGAPSILVDFGTATTFCAIS
EKGEYLGGTIAPGIKISSEALFQSASKLPRVELAKPGMTICKSTVSAMQSGIIYGYVGLVDKIISMMKKE
LNCDDVKVIATGGLAKLIASETKSIDYVDGFLTLEGLRIIYEKNQE
>gi|260688734|ref|YP_003219868.1| hypothetical protein CDR20291_3393 [Clostridium difficile R20291]
MSWNGGVFFMMNTSASVRKVNVRKMTIIGVLSAISIMLSMTPLGFIPVGPTKATIMHIPVIIGAIMEGPI
VGAAIGFIFGISSLLNAITNPTVTSFVFINPLVSILPRVMIGVLAYYVYQLIIKATNKVYISGLITGAIG
SLLNTAGVLGMIYVLYADKYLHAMGKSGSAGKVIMALAAANGVPEAIVGALVVAAVATVLKKSKK
>gi|260688735|ref|YP_003219869.1| putative peptidase [Clostridium difficile R20291]
MYNNILDIEGLKVGQVEDRNGLTGCTVVICEEGATCGVDVRGSAPGTRETDLLDPVNMVQKVHAVVLAGG
SAYGLESTCGVSRYLEEKGIGFDVGVGKVPIVVGAVLFDLGVGSFKCRPDLKMGYRACEVANTDILNQGN
YGAGCGATVGKIRGQEYAMKGGIGSYSIKLDNGLIVSALIAVNALGDVYENGKVIAGALNDKKTETIDTY
KLMKQGESKGGFSVDNTTIGIIATNAKLTKAGCKKISQMGHDGYAKSIFPIHTPHDGDTIFTISTGEIEA
DITLVGSLAVEVVEKSIINAVKKADSVENIMAYKDIVKKREI
>gi|260688736|ref|YP_003219870.1| BirA bifunctional protein [includes: biotin operon repressor and biotin--[acetyl-CoA-carboxylase] synthetase [Clostridium difficile R20291]
MRDKIIEIILNNKSEFISGEELSKQLGVSRAAIWKHMKALKEEGYNIESVNKKGYRLAENPTDLLSPQNI
YYKLDTEFIGKNIEHLDTIDSTNEHAKRIAINSVDGTVILSEHQDMGKGRLGRRWDSKTHEGIWMSIILK
PDMEPFKAPFITLIAGASVTKALNNLGANTLIKWPNDVILNGKKICGILTELSAEIERTNYVVLGIGINV
KIMDFEQEIADKATSLYKEGYMLSRVDIVRNVLTEFEKLYLDYTVNNSKEKTLKICRDYSAIIDKNIYVL
KGDNRELVKCLDINEEGNLLVQRSDGSIKEIISGEVSIRGEKGYV
>gi|260688737|ref|YP_003219871.1| cell division protein [Clostridium difficile R20291]
MYERRASILNKLLKGAGFYLLVFIIIVGIVQFSGKPTEKIKDLKFSEVYRELTDENISRLYFVNQTSVEG
TIKDTNTKFKSYVPTEVMGNKLADEVLDQAKAGKLTFGGEAKPSTPWFVEMLPTLLLIFFMVIIWFVFMN
QSQGGGGKVMSFGKSKAKVHKDDEKTRVTFKDVAGLDEEKEDLQEVVDFLKNPKKYIELGARIPKGMLMV
GPPGTGKTYLSRAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKSAPAIIFIDEIDAVGRKRG
AGLGGGHDEREQTLNQLLVEMDGFGVNQGIIIMAATNRPDILDPALLRPGRFDRQVVVGTPDVKGREAIF
KVHSRNKPLSDDVKMDVLARRTPGFTPADIENLMNEAAILTARKREKKIKMETIEEAITKVIAGVAKKSK
VISEKERRLTAYHEGGHAVCAHVLEEVSPVHQVTIVPRGRAGGFTMQLPVEDKFYATKNEMKENIVVLLG
GRVAEELVLKDVSTGASNDLERVTATARSMVTKYGMSSKLGPMSFDSDDEVFLGNSFSSKRNYSEEVAFE
IDQETKRIVDGAYDKTRSILQENMDRLEYVAQALLIYETLDAEQFVKAFNKELPLNEIENAVTEENSSKE
VEEQLTIKLEKDEEERNNVIDINKNLEDKSDKDK
>gi|260688738|ref|YP_003219872.1| putative ATPase [Clostridium difficile R20291]
MIFDKVLSTINKHNLIQKGDKIVLGLSGGPDSVCLLHVLNRLKKDFNIEIYAAHLNHQIRGIEAQKDALY
VSKLCEDMGIIFFVKSINVPKYCENEGLSLEEGARKLRYEMFYEIKDKIKANKIAIGHNLNDQAETVMMR
IMRGTGLKGLKGIDYIRDNCIIRPILDVERNEIEEYCEAYNLNPRIDKTNLENIYTRNKIRLDLLPYMKD
NFNSNVIESIVRMSNSLKSDNDYIEKEAEAKFREVSNIKEKGFVEINLDDFVCLHDAIKVRVLRNSIKHI
LGDTNFVDQRHIEDIMSLEDNSKVNKMLTLPRNIFVYRKKDSIILTNEEIVNEEIEFYYNVPSNGFIKIK
ELKQIIETQVMSIDRYKSMKLDNSSKGFDFNKVKGGIVIRSRRQGDKIKLAMGSKKVKDLFIDLKIPREE
RCKIPIITDSEGIICVGDYKISENYKIDENTKEVLKINFNKL
>gi|260688739|ref|YP_003219873.1| hypothetical protein CDR20291_3398 [Clostridium difficile R20291]
MEEKSLSVKISINTRQYDEKGNMDTIEMTAFGKIFYKNDGIYVIYKEKEENIEITNTIKILKNQVSIKKF
GAINSTMLFKCGESSTTKYVTPQGTLLIDIDTRELDINIQEGEHIKLKIDYNIKVQDLFLGRNKIDIYIG
TK
>gi|260688740|ref|YP_003219874.1| glutamate racemase [Clostridium difficile R20291]
MNNKPIGVFDSGLGGLTVLKEIMKILPNEDIIYFGDTARIPYGSRSKETIIKYTFQAINFLKTKGVKAIV
IACNTATARSLKEAQEKYDIPIIGVIEAGARTAVSSTKNKIVGIIGTEGTISSKAYNLEISKIDESIEIV
NKACPLFVPIVEEGWANTEVAKLTAKIYLQELKEKNIDSLVLGCTHYPILKRTIGEEVGEHIKLVNPAKE
TAKDLKKILEVQNIINNTEIHGTYQYYVSDIPEKFSDIAREFLKKKIDKIQKVEIQKY
>gi|260688741|ref|YP_003219875.1| putative spore cortex-lytic enzyme [Clostridium difficile R20291]
MDRWSKLMATLLALTFIFMPIKEVFAYEPTENIKKVNKQEKNIAKKEVINLSDNDLMLLSKLVAGEARGE
SYEGQVAVAAVVINRVLDPRFPDTIEEVIYQKNAFSVVLDGSIKMAPTDSARKAAQEALYGTDPTNKAVY
FWNPEIATCKWINRLNPYMRIGNHVFAK
>gi|260688742|ref|YP_003219876.1| stage II sporulation protein [Clostridium difficile R20291]
MRKIKIRLGLLILSLISVISIMTIVINGEVKKVDNISKDYKDKLIRFHVIANSNTDEDQELKLKVRDEVI
KYLQPKLQNSKSIKESEAIIKKEYSSLEEISKNIILKNGYNYSVKVGIQYSNFPTKQYSNIVLPAGEYKA
LKIIIGKGEGKNWWCVMFPPLCFVDESNGVIDKSTDDKLKEVLTDKEYKLIKQDTPKKTSRVKIKFKVLE
VVKDLEKKF
>gi|260688743|ref|YP_003219877.1| GntR-family transcriptional regulator [Clostridium difficile R20291]
MENLTKLNLDNYKPLRDVVFENLREAILEGKLKPGQRLMEVQLAEQLGVSRTPVREAIRKLELEGLVVML
PRKGAYVANMSLKDIMDVLEVRASLEGLAAYLAAERISDEDIKKLKDISEEFKKSTLESDVDALLKLDVE
FHECIFKATNNKKLIQLINSLWEQVYRFRVTYMSAYDTSHNIVEEHKYLLDAIIKGDSELSKKYATEHIE
KAEQFMIDKAMISKDL
>gi|260688744|ref|YP_003219878.1| 4-diphosphocytidyl-2-c-methyl-D-erythritol kinase [Clostridium difficile R20291]
MHYSLNKEDRMDFIRLKSRAKINLSIDVLGKRQDGYHFVEMIMQTIDLYDIVKIKELDEDEIKVKSTSLD
IPLDEDNIVYKAAKILKNKFYIKKGVEIFIEKNIPVAAGMAGGSSNAAAVLVGLNHLWELRLSEDELKEI
GLNLGADVPFCISGRPALAQGIGEKLTNIKGLPCDTNILICKPDLFVSTKEVYQGLDLNNIKKRPNNKYL
IECLKSEDIKAVSESMVNILENVTIGKHKEISDIKQVMMKNNALGSMMSGSGPTVFGLFKNKEDALIGKK
ELLKKYKQVYVVNSSQKGVEICGEFN
>gi|260688745|ref|YP_003219879.1| putative cell wall hydrolase [Clostridium difficile R20291]
MELIKDVIKVDNRIDFGKFQTFIEAEAVVPDKKLDVYEIVKTEGYISLKKIEMADGKILCRGSFNYNVIY
IADDKNTISNVDGKVDINEVIEKDNVVQDMEYMLFSEVEHMDCTIMNERKIKVGALMNIRGSLFEKQRLD
IVKDVAQVEGIQKHRKEICFQDIVGIEKAESSIRDTITINTEEIQSIISLNPCVKVKESRVTDNKVIIGG
VLEINPLACTYEGELVELDRVGIEFTQFVEVPGVSDGMTEEVLLSMSDFNHIFKQNSESNTGLLEIDCMA
CCKVKVTDEVTREVLQDAYSPQKIIKFDHKPIQLNKTLRRSEETFMVREGIRNDNDDIQIKDIVSVCPTM
SIENSYIEGNKSIIQGIIKVEILFVPVEGLKLVYKISEEIPFEHDIEMDNLTDTASVFNTACIDKVEVDL
NRDQIDLIIKIKRFTEALDKKAENFIIKGEDQGVYDLSKAPSIIVYICKEGDTFWNIAKKYNTTENEIAE
LNDIKLDEPIKPGKCLILEKKVVLVD
>gi|260688746|ref|YP_003219880.1| hypothetical protein CDR20291_3405 [Clostridium difficile R20291]
MATVQTLDKIRVSLERHIGKKILLKANKGRKQIITKEGILEKVYPSVFVIKLDDESNGYPRVSYSYSDLL
TSNVKLQVFRDQDKLQIS
>gi|260688747|ref|YP_003219881.1| putative peptidase [Clostridium difficile R20291]
MKVGDIVARKSHNKDIVFKIVSFGVDENNEKIAILKGIAFRVIADAYIDDLELVKAPDIKDILIDKNVEN
LLYKSVRKAKERQKRMTRAVPKLQLNPNTYGMPGKVLQIDGDKEYLKICLDVYAQLGIPAVGVAVSEQNQ
YKEVRALLEKYNPDILVITGHDAMTIKRGDIEDMSNYRNSSNFVKTVKEARKWQPNLDNLVIFAGACQSN
YEKIISAGANYASSPGRIMIHALDPVFIVEKIACSRIDVVVPIDEVIEQTITGVKGIGGSETRGKFRWAM
PKTILH
>gi|260688748|ref|YP_003219882.1| putative dipeptidase [Clostridium difficile R20291]
MKFIDLHCDTIAKLMENVETSELKSNKYSVDIDRLKKGDSLAQTFALFVDTEEVKHPFDYCMSMANKFHE
EMKKNSDEIALATNYEEIMKNQSEGKLTALLSIEEGAVLEGKLENLKKFYDLGVRMMTISWNHVNELSFP
HNKVEYREKGLTDFGREVVHKMNELGMLVDVSHISDGGFYEIAKISSKPIIATHSNSRAMMNHSRNLTDD
MIKVLANKGGVTGINFFHLFLSDKSESKLEDMVRHIKHIVNVGGIDVVSLGSDFDGIDSKVEIEDISQMG
KLYEPLKKEGFSEDDIEKIYYKNALRVIKEVL
>gi|260688749|ref|YP_003219883.1| hypothetical protein CDR20291_3408 [Clostridium difficile R20291]
MFILRFADDDDNLSVKDFTSLTDLKKYISENNIDKTWHQIEEVKKVIPNLKEE
>gi|260688750|ref|YP_003219884.1| putative preprotein translocase [Clostridium difficile R20291]
MSLYTEWRNLSDNHESQEAEVKFWEEYLKVEAGIYNEILNNKMDVVEGKVSELAEKFGTTNEFFMGFIDG
ISESLKEDIVLEEVEADKEVSIKIDWEKLYNNMVTVEAHWLYNLQGWEDILPADQRKEIIKAYKKSKTIV
KEAKIGRNDSCPCGSGKKYKKCCGK
>gi|260688751|ref|YP_003219885.1| hypothetical protein CDR20291_3410 [Clostridium difficile R20291]
MENYEYSGFYIEKPVGNNVFSYDKRENKSIYVPKLINGTLNDVRLGNEVVFNEVDENKEIKAKGLENMVE
YVLGNKKIYVFDNHNHAFYFWAKSLLKGEFTKGCKLVHVDQHKDTREPENYDVDVNNLKDVFRYTNEVLN
VGSFIKPALKYNIFSELIIIDSLYGFDLEVESEFVLDIDLDIFSSDMDYIPFELKFYKIKNLIKKAKVIT
IATSPYFINQEYAIKVLKELFNYDII
>gi|260688752|ref|YP_003219886.1| hypothetical protein CDR20291_3411 [Clostridium difficile R20291]
MDIRALPIRITKEEAIEIAKSGKNSLFSKLILKNKYAHEVRLHYIEFKIITLKIHKTKSIFKNRRYSNDI
NELKILVNGSTGSGSIVQDFPTYEIVKNVDCNIVQYSNKDERRVKAKANKMAMRLIHRFMGGIPEIEIVK
IESIFRPYWVVFFGKVELNRRVSYLPIEADGFVIGM
>gi|260688753|ref|YP_003219887.1| hypothetical protein CDR20291_3412 [Clostridium difficile R20291]
MSKLVSKVKKDLEIKWLGVDGFLVLLYFLITGFIFYGILTRNDIIVGKIIPYGVMAVVIVIFFDYIYRVL
KMTRKK
>gi|260688754|ref|YP_003219888.1| putative sodium:solute symporter [Clostridium difficile R20291]
MWRLDMLTFWENGIIVIFAFILLGIGYYFSRNVKDMESYYLGNRSLPWSLIVGTLVASWYGGVGTVGSVE
YAAIYGISAWAVWSIAAHIGRMPLALWVGPRIHIRTNITVPDLLESFYGKHVAIIGAILMFIYCAQLGEI
TAMGTIGNVAWKIDKELIGLIMVGVVVVLTVLGGLMGVAITDMVLFFCMVFGLTMVMPGQFEQIGGFQGL
TEALKDAPQLMHPTKGMSAMKALMLIVYSFGAYSDPTFYQRFSAADSPKVGRRALLTCFSLWICFDMVLT
ITGLIVRATYPEMAPAAGYITLVLDTLPQGIRVIFIIGILGSIISTLDSYYLAAGATLANDIYGRITKKE
LSQKQLVKFTRIGVCLAAVMGLSVAFRFENVYDACIFVGSIWMGSAFVPIVGGLLGNGRRTSMGGILGMI
VGGVTFGYFKIFPVQSFELEPLVIAIPFSFIAWMIGNRIGENLNTQNNL
>gi|260688755|ref|YP_003219889.1| putative transporter [Clostridium difficile R20291]
MENKSNFKRFLIIFILAFGTTAMYSLPYMKSSFYDPMQQALSLSHTQIGNLLSLYGLVGMVSYFIGGWFA
DRFSVRKLITFSLIASGVLGFYFSTFPSYSMILLIFVLWGFTTILTFFSASVKVVRMQGSESEQGRIFGF
YEGLSGVSGTLISFIGLYFFGKFAEITVGFKYVVWLYSAASIICGILLFFLVEEKKDSGASDEGLSIKSL
LKVVTMPKAWLIGLIIFSTYLVFSSLTYLSPYLSEVYVMPMTLVSALSIIRTYVIKMGASPVAGVITDKV
GSSIRVMFVGFILMTVSTAAYLVIPKSTGFIWIAVINMIILSVILFGFRGIYFASVSESNISLETTGAVV
GFASFIGFSPDAFYYTIAGNWLDKYGQTGYTYIFILSVVCAVIGIFATYALNKINKRENKGLNNKIA
>gi|260688756|ref|YP_003219890.1| methionine gamma-lyase [Clostridium difficile R20291]
MSNNINQDLETKIIHWGHSADPTTGALATPICQTATFAAKTVEHFEELCMTWGYVYTRECNPTLTELEAK
LAMLENAESAISSTSGMGAITSTILALVKSGDHIVSSDGIFSHTKLFMSELLSKFGVEVTFVDAVNPQNV
KEAMRPNTKIVYIESPLNPSLDLVDIKTIAEIAHENKSLAIVDSTFGTPIVQRPIDLGADLVIHSLTKFI
NGHGDTLGGAVAGSKELIDLVRWPSLCCFTGASLPPMSAWMILRGMKTLDMRMKKHCENGLAVAEFLEEE
ENVELVKYPALKSHPQYELCKTQMNGLGGGVVSFKLKDGINGLTRDQASRKLMNSLELATIATSLGEEHT
LVQMNGENLIRIAVGLESSNDIINDFKQAIKKLK
>gi|260688757|ref|YP_003219891.1| putative resolvase [Clostridium difficile R20291]
MIIIYGYCRVSTKNQTDNNSLYQQQQEILNKYNDAKIIKETYTGTTTNRPKFEKIISSLKKGDLLVATKL
DRLARSTSEGIQLIEGLFAKEVSVHILNIGLLENTSMGKFFLTTLLAVAELERNMIIERTQLGKEFAKKK
KDFKDGRPKKYSNQQIQYALGLLNSKPYREVVKMTGISKSTLIRAKKSI
>gi|260688758|ref|YP_003219892.1| hypothetical protein CDR20291_3417 [Clostridium difficile R20291]
MNSLLKEAIDELKNIHCGEVFLLKELFKGYEWNRLEMNIRLKLGKLFLYEVVTNPNLNVEVINKNSAYQQ
MYKKK
>gi|260688759|ref|YP_003219893.1| hypothetical protein CDR20291_3418 [Clostridium difficile R20291]
MENYQSTNTCTYNILYVQFNEDFERSKYFSYDVKYPVIYNIRNQSTYVNPVILNNINNAVRMTVNNFKNG
LQEEEREYNNAASQNSLPKQSYWVSTSYAVTFNKNYVLSMILNLMGFANNYGPKYNTLNNYNIDLTTGKE
LLLNDIFRDGVDYINIITDYIKSQINENREMYYSNVELVIPEDQAFYITDNGIIIYFGVDEIAPESFGIP
KFELKFSDFGNFINLRFYCISPDIYVQSRGRAKHFMG
>gi|260688760|ref|YP_003219894.1| hypothetical protein CDR20291_3419 [Clostridium difficile R20291]
MLLLADKWKDYELIDMGNGEKLERWGSYVLRRPDPQVVWPMESEWALWKNPHGHYHRSNKGGGQWEHKKR
YPEQWTINYKNLKFHIKPTGFKHTGLFPEQAANWDWMIEKIKKANRPIKVLNLFAYTGGATVACASAGAE
VCHVDAAKGMVNWAKENIELSGLKNQTVRFIVDDVVKFVEREIRRGKKYDAIIMDPPSYGRGPKGEVWQI
EEKLYSFVDLCMGVLSDNPLFFLINSYTTGFSPIVLENVLSTTIGKKTNTGDIYGGELGIPASRDGKILP
CGIFGRWEKK
>gi|260688761|ref|YP_003219895.1| putative pseudouridylate synthase [Clostridium difficile R20291]
MIKVIYEDNHLLVVEKPVNILSQGDNTNDKDMVNLLKDYIKKKYNKPGNVYIGLIHRLDRPVGGVMVFAK
TSKAASRLSEQVRSKTFKKTYLAVVHGKIKSNSDILKDFLYKNKKTNMVTVVKKSHKDAKEAELNYNVLD
FKENLSLVQVNLKTGRSHQIRVQFASRKHPLYGDQRYGKEINKIGQQISLWSNKIEICHPTTKEKMEFTC
HPPDKYPWNIF
>gi|260688762|ref|YP_003219896.1| MerR-family transcriptional regulator [Clostridium difficile R20291]
MSKKFSIGEMSKLHKISIQTLRYYDQIDLFKPVHVDQESNYRYYSIDQFSQLDIIKYLKYLGMPLKEIKS
KLDENNEEILKLLTNKINIVDEKIKELELIKKVLSTKKETMEKGMKVDEVGKIVRKHIPRRSILSIEYEE
GLSSEETMELSRRQIANILEDNISVFYGGVSGLVSIDKFLKEDKVIYDNSFVTVERDLFDIKSQKHITEI
SSGDFICMTYKGSYKENYTAFKKLVDYVEYKRIPIENYIYEIPIIDPLSTNNEEELLTEIQIQVKKREID
LRCLV
>gi|260688763|ref|YP_003219897.1| putative ABC transporter, permease protein [Clostridium difficile R20291]
MNIFNKVALQGLKKNRTRTLVTIIGVVLSAAMITAVTTFGVSLMNYMTNGAIIKYGDWHVQFLDVDSSFV
QEQRVNDEVANTATFENIGYATLEGNRNPDKPYLFIAGFSKEAFDTLPITLISGRLPENSREILVSSKVA
TDGGVKFAVGDTISLDVGKRMSENEKLGQSDPYTAGSEVFVPQDKKTYTVVGICRKPVFEESSAPGYTLI
TKEDKQVKTDSLSLFVTLKNPHQIRSYTSSTKDHASIFNDNVLRFIGVSDNNLFNMFLYSVGGIVLAIIM
LGSIFLIYNSFNMSLNERTHQFGILSSVGATAKQLRNSVLFEGICIGAIGIPIGVAIGIVSIGLVISVIA
KNFANILYVNVPLTLTLSIPAIIVAAVVSMVTILISAYIPARKAANTPVMECIRQTNEVKIESKSVKTSK
LTQRVYGLEGVLAMKNFKRNKKRYRSIVLSLVLSIVLFISTSALVADLKQMSNQRSEVTDQDIIFSTQGM
KDNEMLKLYDKLKTANGVYEGLYQKLMTYSCVAKVSELTDDYLNYEGSHSMSEMLELPVDMQFLDDRTYL
NIIKSLGLPAEEYTGQNAKLIAVSMVTKDNNIIDIFNSSSMNVSLTPETNGKLEIPERQNVNISFVKVVP
PDSPPGIRSSDVKKASFRVLAPYSAKDKFEIPGVSTGIESLSFQSKNPTQSVAEMEQIIESEGVTNEYNL
YNMYGMMDENRNYIFIANVFAYTFIIMISLISIANVFNTISTNIKLRRRELAMLRSVGMSEHDFQKMMNF
ECAFYGMRALFFGLPIAVISSWLIHKVMVTDDIDFVIPWFSIGISIFSVLFIVFITMLYTINKIKKENII
DALRDDMA
>gi|260688764|ref|YP_003219898.1| ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MAFLKIEDLCKVYGKNENKVTALDHVSLTIEKGEFTAIIGSSGSGKSTLLHSIAGVDVPTSGKIYLEGQD
VYGQSNEKLAIFRRRQVGLIYQFHNLIPTLNVVENITLPILMDKRKVNQERLNDLLELLGLKERKTHLPN
QLSGGQQQRVAIGRALMNAPAVMLADEPTGSLDSKNGQEIIQLLKESHSKYHQTLIIVTHDENIALQADR
IICISDGKVVRDERKVNR
>gi|260688765|ref|YP_003219899.1| two-component sensor histidine kinase [Clostridium difficile R20291]
MFRNREFRKFAILFLLITILTVALGFAISIMTGILSIVSATTFGIAFFVFTKNRYKSIAQISEQINLVLH
NANHLYIAESDEGELSILQSEITKMTLRIREQNYALKKEKEHLADSLADIAHQLRTPLTSVTLILSLLEN
TSDEDERKELIRETEELLIRMDWLITSLLKLSRLDAGIVVFQKEQIDVNNLISSALHQLLIPMELHNITL
HIDIPKGVRILGDLNWLSEAIQNIFKNCMESVGDNGKIDIVCEDNFLFTQLTIHDNGAGFKKEDLPCLFN
RFYRGKNSSTAGYGIGLALCKTIIMRQGGTITAQNHPQGGAIFVIRFPK
>gi|260688766|ref|YP_003219900.1| two-component response regulator [Clostridium difficile R20291]
MKRIFLVEDDKAIAKNLILLLNSEGFIVTHVSTRSEALVEIAKNKFDLALIDISLPDGNGFTICTEIKEK
QDIPVIFLTASGDESSVVTGLNMGADDYITKPFRPRELIARIRTALRKSGRFGSTFEICGLYVDTATGVV
KKNGNEVFLSALEYRLLLVFISNPKSIITRVRLLDELWDAAGEFVNDNTLTVYIKRLREKIEDDPSSPQI
ILTVRGTGYRLGGSYVSK
>gi|260688767|ref|YP_003219901.1| carbamoyl-phosphate synthase, pyrimidine-specific, large chain [Clostridium difficile R20291]
MPKLDSIKKTLVLGSGPIIIGQAAEFDYSGTQACQALKEEGIEVVLVNSNPATIMTDKEIADKIYIEPLT
IEFIEKIIEKERPDSLLAGMGGQTGLNLAVELHDAGILDKYNVKVIGTSIESIKKGEDRDLFREVMKEIN
QPVIVSDIVTNLEAGLEFANKIGYPVVVRPAYTLGGTGGGIADTEEELREILSHGLQLSPVGQVLLEKSI
KGWKEIEYEVMRDGNGNCITVCNMENVDPVGVHTGDSIVVAPSQTLSDEEYQLLRKASIDIINAIEVQGG
CNVQIALNPHSLEYAIIEINPRVSRSSALASKATGYPIAKVAAKIALGYTLDEIENAVTKKTYACFEPTL
DYVVVKIPKWPFDKFRHANRKLGTKMMATGEIMSIGSNFEAAILKGIRSLETGKYSLVHAPSEGRTLEEL
KARVVVPDDERLFDLAEMIRRGYKVEMISEITGVDKWFINKFKWIVEQEEKLKVLKIEDLDKEYLHELKK
KGFSDKGISDLMKISPEKLYELRSLYNIQPVYKMVDTCGGEFEALSPYYYSTYEQYDEVVVSDKRKVVVL
GSGPIRIGQGIEFDYCSVHCVKSLRKMGIETIIVNNNPETVSTDFDTSDKLYFEPLTEEEVLNIIEKEKP
EGVILQFGGQTAIKLAKFLHEKNIPILGTDFRDIDAAEDREKFDDLLERLDINRPKGKGVWTTNEGVEIA
KELGYPVLVRPSYVLGGQGMEITYNEEKLIQYLDDAFDRDHKNPVLIDKYLTGREIEVDAICDKEDILIP
GIMEHLERAGVHSGDSTTMYPSQNISDEIKEKIVEYTKKIALDLNVLGMVNIQFIEFQNELYIIEVNPRA
SRTVPYISKVSGVPIVDLATKCMLGAKLKDLGYGTGVYKEPKLVSVKVPVFSMSKLSKVEVSLGPEMKST
GEVLGVGENLEEALYKGFLAAGRHMSDERGVVLATVNNHDKDEFIEIAKDMKELGYTFVATEGTAKSLRE
NGIEADIVNRIEEPRPNILDAIRNKQVDIVINTPTKGNDSTRDGFKMRRTAIEFSTEIMTSLDTLKALVE
VKKKHLNKDKLKVYNIAE
>gi|260688768|ref|YP_003219902.1| carbamoyl-phosphate synthase, pyrimidine-specific, small chain [Clostridium difficile R20291]
MFFSLSKENYRRYCSMKARLILEDGTVFIGKAFGYLEESVGEVVFNTSMIGYGEVLTDPSYYGQIVTMTY
PLVGNYGINLSSAESEKVQVKGFIVREKSDSPSNFRCEIDIDQYLKQNKVIGLEGIDTRALTKILRNNGT
MKGIITLEDSKLEDVKHKLDKFSNTEAVRTVTRKEVEHIKGNGPKVAVMDFGVKRNILRSFIARGCDITI
FPATTSPEDVLSINPDLIFLSNGPGDPEDLEDVIENIKALIGKKPIVGICLGHQLLALALGGKTAKLKFG
HRGGNHPVKDLEEGKVFITSQNHGYYVSEVPEQMKVTHINLNDNTVEGMRHEKLDVYSVQYHPEACPGPK
DNDYIFDKFLELVK
>gi|260688769|ref|YP_003219903.1| carbamoyl-phosphate synthase, pyrimidine-specific, large chain [Clostridium difficile R20291]
MPKLDSIKKTLVLGSGPIIIGQAAEFDYSGTQACQSLKEEGIEVVLINSNPATIMTDKEVADKIYIEPLT
IEFIEKIIEKERPDSLLAGMGGQTGLNLAVELYEKGILDKYGVKIIGTSVESIKKGEDRDIFREVMKEIN
QPVIVSDIVTDLQAGLDYALTIGYPVVVRPAYTLGGTGGGIADNEEELREILSHGLQLSPVGQVLIEKSI
KGWKEIEYEVIRDSKGNCIVVCNMENIDPVGVHTGDSIVVAPTQTLSNKECAMLKKASLDILNAVEVQGG
CNVQFALNPHSFEYAVIEINPRVSRSSALASKATGYPIAKVSSKIALGYTLDEIENAVTKKTYACFEPTI
DYVVAKIPKWPFDKFKKANRKLGTKMMATGEIMSIGSNFEAAILKGIRSLETGKYSLVHTPSEERSIEEL
KKRVVVPDDERLFDLAEMIRRGYKVEMIEQITGIDKWFINKFKWIVEQEEKLKVMKIEDLTKDYLLELKK
KGFSDKGISDLMKISPEKLYELRSLYNIKPAYKMVDTCAGEIDAISPYYYSTYEQYDEVVVSDKKKVIVL
GSGPIRIGQGIEFDYCSVHCVKSLRKMDIETIIINNNPETVSTDFDTSDKLYFEPLTEEEVLSIIEKEKP
EGVILQFGGQTAIKLAKFLHEKNIPILGTDFDDIDAAEDREKFDDLLERLDINRPKGKGVWSLNEGIEVA
NELGYPVLVRPSYVLGGQGMEITYNEEKLSQYLQDAFDRDHKNPVLIDKYLTGREIEVDAICDKEDILIP
GIMEHLERAGVHSGDSTTMYPSQNISDEIKEKIVEYTKKIALDLNVLGMVNIQFIEFQNELYIIEVNPRA
SRTVPYISKVSGVPIVDLATKCMLGAKLKDLGYGTGVYKEPKLVSVKVPVFSMSKLSKVEVSLGPEMKST
GEVLGVGENLEEALYKGFLAAGRHMSDERGVVLATVNNHDKDEFIEIAKDMKELGYTFVATEGTAKSLRE
NGIEADIVNRVEESRPNILDAIRNKQVDIVINTPTKGNDSTRDGFKIRRTAIEFSTEIMTSLDTLKALVE
VKKKHLNKDELKVYNIAE
>gi|260688770|ref|YP_003219904.1| carbamoyl-phosphate synthase, pyrimidine-specific, small chain [Clostridium difficile R20291]
MKGKLILEDGTVFEGKAFGYLKEAIGEVVFNTSMAGYGEILTDATYYGQIVTMTYPLIGNYGINLEDVES
NKVQVKGLIVREKSDNPNNFRCEMDIDTYLKQNKVIGLEGIDTRALTKIIRNNGTKRGIITLENVSLQDV
QSKLEEHCNKDSVKNVTRKEIENIKGTGAKVVVIDFGVKNSVLESLKACNCDITIAPAMTTVEEILNINP
DLILLSNGPGNPEDINDIVENIKKLIGKKPLTGIGLGHQILALALGGKTSKLVFGHRGGNHPVKCLETGK
VFITSQNHGYNVSEMPENTEVTHINLNDNTIEGMRHKELPIYSVQYIPEYTTKEDLDCIFNKFLALI
>gi|260688771|ref|YP_003219905.1| orotidine 5'-phosphate decarboxylase [Clostridium difficile R20291]
MINGKEKLIVAIDTDEFDKAKELIDRLEDSVDIFKVGLEQYVATKGKTIDYLKEKGKKIFLDLKFHDIPN
TMKSAVRAAVRDNVWLMTIHVSDMEGMRQCALIAREEAERLNIEKPLVVGVTVLTSLSNQDLQDIGCNMT
TEELAIKRAKLAKESGIDGVVCSAQEVDKIVEACGADFITVCPGIRPKSAEVGDQKRVVTPSDAIKKGAH
YLVVGRPITKAENPRESAINIVREIENA
>gi|260688772|ref|YP_003219906.1| hypothetical protein CDR20291_3431 [Clostridium difficile R20291]
MYKCGKCNLRGCSNGNMDKLMKICPTREIELQQKAKQLYEEEENRKIAYNAGLVEAEGYCQYTRLKEIIE
FAKKCGYKKIGIAFCIGLKREMQTAQKIFEHHGFEVFSVICKNGAMPKSTIGLEASQTISKCSDEVMCNP
IGQALFLNEAKVDLNVILGLCVGHDTLAMKYMEAPITTLVVKDRVTGHNPVAAIYNAESYFEKKLFDKDE
E
>gi|260688773|ref|YP_003219907.1| hypothetical protein CDR20291_3432 [Clostridium difficile R20291]
MELYEAIFYRKSVRNFSSKKIKKPLMEEIKRSCKNLEYLNEDLNIKAHVVDRGHIIHFLMGKECKVKAPH
YIVVTSDKGEDYLQNIGFATEGVVLRLTTLGIATCWLEGNLKREDILEFVDIGNKNFEEDEEDDLDYLAG
VKTEEDDENKIENPYIIIAFGYPAKNEELFRTRYARPDRKPVKDMINKINRNRKWKDILELTRRAPSVKN
SQPWYFHKDERGLHLFEKRPKKHCEDMNKVSLGVALRHFDIACIKNKIDVSYEKLPIRNKIGKSYFITVV
EHVKPEEETQEENVTLEKEESQDE
>gi|260688774|ref|YP_003219908.1| aminopeptidase [Clostridium difficile R20291]
MNLNRNLEKYAELAIKVGVNIQPGQILLIKSPIECADFARNALKEAYKCGAKNVYIEWSDEESTLIKYLY
APDEAFHEFPKWTAEQYVDIAKEGGAFLSVYAQNPDLLKDVDPERVANFQKASGKALKEWRSYTLTDKCK
WSIVSVPTKDWAKKVFPNLSEDKAIEKLWDAIFKCSRVDGQDPIKAWEEHNENLKSKMDFLNKNNFKTLK
YKSSKTDLTLDLPKGHVWLSGASKDPNGISFNPNIPTEEIFGMPHKFKVNGTVYSTKPLVYGGNIIDNFF
LTFKDGKIIDFSAEKGLDTLEKLIETDEGSHYLGEVALVPYNSPISNTDIIFYNTLYDENASCHFAIGSA
YKTCLEGGNNLKDEELDEHGVNDSLTHVDFMIGSADMDIIGETYDGKQIQIFKNGNWAF
>gi|260688775|ref|YP_003219909.1| putative homocysteine S-methyltransferase [Clostridium difficile R20291]
MEIRQYLKNNILIFDGAMGTMLQQKGLKLGENPEVFGLQNPDKLIEIHTAYLEAGSNVILTNTFGCNELK
LDSKYTVEEVIDNAVLVARKAIENVDNTKPRYVALDIGPIGEMLEPMGTLSFDNAYEIFKRQVLQGVKSG
VDVIVIETMMDLYEAKVAVLAAKENSDLPIFCTMTFDEGGRSFTGCMPECMVATIEGLGVDAIGVNCSLG
PKQLLPIVEKIASRATVPVMVQANAGLPNIVDGEAIYDVDAKEFFEGVKKFVEVGATIIGGCCGTNPSFI
KEISENINSVTKGCIEKIDKCVVCSPSKFVEVQSPTVVGERLNPTGRKSLQEALKNENVDYAINLGLEQV
NAGAQILGVNVGLPEIDEKKLMPKLIREIQAVVDTPLQVDSSNVEALEQGLRYYNGRTIVNSVNGKEESL
ESILPIVKKYGSCVVGLTLDEKGIPKKAEERFEIAKRIVNRAVSCGIKPKDIFIDCLSLTVSAQQEEAIE
TIKAITMVKTLGVKTILGVSNISFGLPNRKALNASFLTLALGAGLDLAIINPNEYSMMEAINSFKILNNT
DKGCINYINQYSNINNSKKSDSSTKIDKDLPLDILVERGLKDEAKNVTLNLLKEKDENYILDEILIPALD
KVGKRYDSGDIFLPQLIQSAETVKVSLNTIKETLLSKSSNNVSKGKIIVATVKGDIHDIGKNIVKIMLEN
YGYEVIDLGKDVPIEEVVEVAKKRNIKLVGLSALMTTTVQSMKDTIQALRDNEINAKVFVGGAVLTEEYA
EEMGADYYSKDAKSAVEIAKLNF
>gi|260688776|ref|YP_003219910.1| hypothetical protein CDR20291_3435 [Clostridium difficile R20291]
MENNLIGREDISINQSEVLRYLQYRGQEIDKDLKYTIDECVAITKNKINPRYLSRIYPIRINKDNVVELE
GTNLTLESKDVYELLKECNECVIMAATIGIDIEKEIRRHSYSNLTKGLIIDSCGTTAIEEVCDIVQNNLE
KVFLNQDKFITMRYSPGYGDLPIEKNIDILNVLNAQKQIGLTITSNGIMIPRKSVVAIIGISNTRINKSK
KEKSCENCKNYRNCTYRKGANSCGNKTISEK
>gi|260688777|ref|YP_003219911.1| S-ribosylhomocysteinase [Clostridium difficile R20291]
MEKVESFKLDHTKVKAPFVRKCSVLDGVKGDKVTKFDLRFLQPNVESFGTAAMHGLEHLLATYLRDTLDG
VIDLSPMGCRTGFYLILWGDVDAKTVKIGLEEALKKVLESDKMPAATAIECGNYRDLSLFGAKEYAKDVL
DKGFSLNIYGE
>gi|260688778|ref|YP_003219912.1| two-component sensor histidine kinase [Clostridium difficile R20291]
MFRPILDLIISCALTSMLILTSMYIIKLLYFNSEISVINQLVYQLRDFRSLIGESLFYPFLFTITSLAIY
SMISYKRNKQIVDFIRKTNRKNQKLEIIKSAVNLMDEGNLEKSIDIEYDLDILKDKEKDDIDELAHKINN
IVHQLRNITIEERQAQQTKTDLITNVSHDLRTPLTSIMGYLGVIEEGKYKDEVQMMYYVDIAYEKSKNLN
VLINDLFELTKMQNNTIKLNKIEINLVELLSQVVSQFEIYFKQEFMVSRINFNEEKLIVKADPNKLVRAF
ENLITNAVKYGKDGHYVDIVTEKMEDMAVVKVINYGEPIPVLDLPNIFDRFYRVEKSRNRNVGGSGLGLA
ITKNIVNLHDGEITVSSDKYQTVFEVQLPIIQSA
>gi|260688779|ref|YP_003219913.1| two-component response regulator [Clostridium difficile R20291]
MNNTVLVVDDEKEIRDLIEIYLLNSGYNVIKAEDGKEALDILKKENIHLMILDIMMPKMDGIEVCRKVRE
SLNIPILMLSAKSEDMDKIQGIMTGADDYLTKPFNPLELTVRVKSLIRRAYYFSGANNEDKDVIKVGVVI
IDKEKHSVTVAGNEIILTSREFDILYLLANNKGRVYSTEEIFEKVWKEKYYQSNNTVMVHMSRIRDKIEK
YTDGEKIIHTVWGVGYKIEK
>gi|260688780|ref|YP_003219914.1| D-alanyl-D-alanine carboxypeptidase [Clostridium difficile R20291]
MKKFKLIGAIILVVFISVFISKDRLLKKDKDPIVAAQHDSEQDVEANSQNKNHSNSISNILLVNKTNGIS
KNYTPENITKVNIPFVEEATEEEKQMAGEPAKAVEDLVKQANSEGIQFLGSSAYRSYDTQLDTYTRRVKS
QGREKADAYVAKPGYSEHQTGLCIDLTNPERWFVGSTKEAKWLAENAHKFGFIIRYPEGKEDITGTAYEP
WHIRYVGKDAAEEIYSKGLTLEEYLQNK
>gi|260688781|ref|YP_003219915.1| putative ATPase [Clostridium difficile R20291]
MSIQKLLSKARKAIQDFDMIQENDKIAVGLSGGKDSLTLLHILKSYQRFSPQNFELIAITLNTGGVDNSP
LDKLCKEINVPFYEFQTDIKEIVFDIRQEKNPCALCANLRRGALNDNAKKLGCNKVALGHHKDDAIETFL
MSMFYEGRVNCFSPKTYLDRQDLTVIRPMIYIEEYMTKKISKDSNYPIITNPCPANGHTRREYIKNLIAN
LNKEMPDFKRNVFGALNNSEKLFIWDKEKIKNFK
>gi|260688782|ref|YP_003219916.1| putative exported phosphoesterase [Clostridium difficile R20291]
MNSKIKYFLKFFILIFILIFIYSVAIEPSLLIVKKYNISENGALIKNDTIESKSESVKVVQISDTQIGSF
YSTKNLKKVANKINTLNPDIIVFTGDLIDYSNKNPSVDEITTILSSMNARLGKFSVFGNHDYMYKLPRYY
RQIMKNSNFNLLVNENKKIKLKDDKYINILGVDEILNGNPNIKYLESQIDNKNFNLLLAHEPDLVDMLSK
DTMNLVLSGHSHGGQIRLPIKGALVTPPYGRKYTKGFYDINGNHLYVSSGLGSTKLPFRFFNIPEIIEFN
III
>gi|260688783|ref|YP_003219917.1| hypothetical protein CDR20291_3442 [Clostridium difficile R20291]
MKSILIMGGSDFIGSALAKRLIKCGYQIDILTNGKKEIDYNGFKEHLICDRKVRKDMENIITGRKYDYIY
DMTAYTKEDVSNLIDFISMDNLKKYIVLSAGAVYKDSGRNIKEENEKGENENWGKYGLNKKEAEDFIINS
PIPYIIIRPTYIYGENNNLYREYYFFEKIEKNEKIPVPKGKQVSNQFIYIGDLVKVLESIMKNPHVREAY
NVTNPQLISWDDLIYTCGEIIGKEPIIKYVDMEKVEFRERTYFPFRNIDFNLDINKLIEHGLYIPNVLLK
EGLTATYKWFSANKPKMHDRKMNKVESVMQIV
>gi|260688784|ref|YP_003219918.1| putative phosphatase [Clostridium difficile R20291]
MKKNYEIVLFDLDGTLTDPKEGITKSIQYSLNSFGIKEDLENLDQFIGPPLHDTFKEYYKFEDKKAKEAV
EKYREYFADKGIFENKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFKYIAGSNLDGT
RVNKNEVIQYVLDLCNVKDKDKVIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEELSESEPTYIVENVES
IKDILL
>gi|260688785|ref|YP_003219919.1| ferredoxin [Clostridium difficile R20291]
MKAFVDKDVCVACGACIGTCPDVFSMSDEGHSVAIEGEIPADLQDLCKEAEEGCPVSAITVK
>gi|260688786|ref|YP_003219920.1| putative amidohydrolase [Clostridium difficile R20291]
MKNLLIRNGTIISPTDGIKFEKRDILVLHGKIYAIGLNLKEKIRKEKLLTNKEFEIINADNMYISPGFID
VHTHCYKRKLPTGMDSDSIGIEKGSTVIFDAGTAGPSNYYDFKKKYMDECKTEVYSFLNVTNEGLNILNE
STSLDVINFDKVESIVEKNIEKIKGIKVKASKFQSNESGIDIIKKSKQVAKKLNLPLVVYIGEYPSYIDE
VMNILGKGDVVTPVYGNSTNGILKESGTLRKSVINAKNRGVLFDVCHGVDQFDFKVFKKAIKQGLEPDLI
STDMHIKNMKDVNYSLLNVINKIMELGISLEKCIEKVTEYPTKIFDLHGNKGRIKIGGEGDFTIFTMEEC
NDIIKDYNNNELVLNKKLRLQYTVKSWMKSSEVYRHGYENTIIN
>gi|260688787|ref|YP_003219921.1| hypothetical protein CDR20291_3446 [Clostridium difficile R20291]
MNKIDLNLLEKVAELRGTPLGAYNIRKNGQGVERHSTENVTIIPKTDKPGIDIIVKPNTKGENVHIPVIV
TEAGVQDMVYNDFEIGENADVVIIAGCGIHNCGCDDSEHNGIHRFFLRKGARLKYVEKHYGEGDGEGKRI
LNPVTIVNMDEDSYCEMETIQIKGVDSTKREMDANLGKGAKIVVFEKLLTHGNQVAESNMKVILEGENSS
AQVVSRTVGQDNSKQKFNPCVIGDSLCSAHVQCDSIIMGNSQISAIPEIAANHPDALLVHEAAIGKIAGD
QILKMMTLGLTEEEAEQQILNCFLK
>gi|260688788|ref|YP_003219922.1| ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MLEIKNLSFNVESNNEELGIINDVSLSFERGKLIVITGPNGGGKSTIAKLIMGIEKATSGQIILDGEDIT
NLSITERAKKGIGYAFQQPPRIKGMTVENLLTLAHGKPLSTDVCCQYLTDVGLCSKDYLNREVDNSLSGG
EMKRIEIATLFARDLKVSIFDEPEAGIDLWSFGKLNESFKKIHEESNQTIIIISHQERILELADEIIVLQ
DGSVKSHGTKEAILPEIMCQVNSSCELMKDMN
>gi|260688789|ref|YP_003219923.1| hypothetical protein CDR20291_3448 [Clostridium difficile R20291]
MFKKMAVLKDIATKIGRKKAYELLEMVEGNDAFVAEVKIKKNGIESKKEEIMLKDNQKIILEYIEG
>gi|260688790|ref|YP_003219924.1| putative glyoxalase [Clostridium difficile R20291]
MINKIGKITLYVNNQEDAKLFWTEKLNFVVTYEKEMGPNMKWVEVAPSKNEFTTFVLYDKNLMMKQNKEI
NVSHPSIILSTRDINGTYEQMANNEVEVGELMEMPYGRMFSFKDQDGNDYLVREDK
>gi|260688791|ref|YP_003219925.1| putative multidrug resistance protein [Clostridium difficile R20291]
MFIRKNVIKLAIPIMIEQTFVMLLGVFNTIMAGHIGEEAVSAVGMVDSINNIFISVFAALSVGATVVVAQ
QIGKKDSEKVNETIKQALVSGVILSFTITILMWVFRTGVINLFYGSAEELVKSNAKLYIEFTLFTYPFIA
TQQIANGILRGCGDVKKPMYVTMFMNIVNVTLGYILIYGIDLNPLGINLQTPSYGITGAAISIAIARIIG
CIVIIRALFKGNEFISMGKIFPFKIDVETQKSIFNIGIPAGVEQLLFNAGKLIVQVFIVTMGTSAIASNA
IGMSIASIINVIGNALALSATTLVGQYIGRGDIKGAKSTLLYLTKFATICLFIVGAIFIPIAPWISSMYT
QNASVIDISTQLIRSDCLAMVIWPISFVLSAGLKGAGDTRYTMMTAVIGMWIFRIFTGYVLGVVLEFGVL
GIWIGMYTDWLVRGTLYCLRLRGTKWLKHKVA
>gi|260688792|ref|YP_003219926.1| hypothetical protein CDR20291_3451 [Clostridium difficile R20291]
MVYPISSTAPIRFRRYTVSYLENMENIYLTIATYFDTLGLGTMNIDKVYGQWAWFTDNIYDLNLFVFVGN
YPYQIAKNRYDTFVDILPVAITSIVNGDRVFLISNPCLLNSKITVRFISSHPTLNRTVDYGNIRDFIF
>gi|260688793|ref|YP_003219927.1| hypothetical protein CDR20291_3452 [Clostridium difficile R20291]
MEIFAIGHSNYPYDKLINMIKKYDINCVVDIRETPYSKYNIQYNKEAFNESLRNSGFIYIYMGKEFGAKR
NNKDVYTQEGYADFEKVAKEDIFLNGIERLKKGCQMGYRIVLLGAMQEPIRCHRSILVGKVLNKEGFDVK
YIMHEGNLAYQEDIEESLLDKYFSDREQLSIDNLLGSALTREEMIQEGYKLANKEIGYRTEKLGK
>gi|260688794|ref|YP_003219928.1| putative collagen-binding surface protein [Clostridium difficile R20291]
MDGYFTTKMKGAFRIMKKILKRLCTGFLAFATVVTALPSSTVHASNTQYWTESKERVSIVEQVMNDGSIS
STFNEGHLTVEGEDAYCIDINTAFKNGYKTKADASTRMSADQIADVALSIEYVKQYTDIHSGISSKHAYL
LRQLVVWQRLSVQPDWQWDNVRASYDEIPKAVQDEVFAGAKAFVKENKGRYDCGGYIYSGEGQELGQFWA
KLAVGNTKLQKTSTNANITDGNGIYSIAGATYGVYSDKDCTKQLTTLTTDTSGNTEAVEVRATIVYIKEL
SAPAGFKIDKTVYSLSVEVGKTATLKVSDTPKVTDTLIELFKIDMETQKSNPQGNASLEGAEFTWNFYAG
YYNKNNLPAQPTRTWVTKTIAEKDSDGAIHYITRLADKYKVSWDSFYTQDGKNVLPLGTLTVEETKSPSG
YLLEGTYMQADGSEEQIKGMYLTQITEDGDLAVLSGSNQYHVSDKVIRGGVKIQKRDLETKDTKAQGGAT
LKDTAFEIISLNENAVLVEGKLYKKNEVLKTIHTDIEGIASTSADLLPYGKYRLSEQKPPEGYLTDGAKP
IDFEITENGKIVDLTDEAHSIYNQIKRGDIEGVKIGAGSHKRLADVPFRITSKTTGESHVVVTDDNGQFS
TASDWASHKHNTNAGKTSEDGVWFGTSEPDDSKGALLYDTYIIEELRCESNKGFKLIPPFEIVISRNKVV
VDLGTLTDEYEKEITIHTTATSKDGEKTILAGKDVTITDTVKLDGLTKGTKYQLKGWQMLKEENAELIIN
DKRIENDYIFTADSETMEVKIEFTFDASNLGGKQLVTFEELYDLSNPDEPIKVAEHKDIEDDGQTVTIKE
VPETPTPEEPEKPTTPDTPTKTDSPKTGDNTNILAFAIMMFVSAGGLAGTYFFKHRKMKKS
>gi|260688795|ref|YP_003219929.1| conjugative transposon protein [Clostridium difficile R20291]
MELKYIVPNVAQTFGNLEFAGENKVDQQRINGRYTLVSRSYNLYSDIQRADDIIVVLPAKAGEKHFKPEQ
KVKLINPRITAEGYNVKGRGFTNYILMADDMLPAESK
>gi|260688796|ref|YP_003219930.1| hypothetical protein CDR20291_3455 [Clostridium difficile R20291]
MKLKNPMLVVTDIDKSVEFYKKVFGLYVIMDFGANKTLTGGLALQTSETYKEFIGTSDISFGGNNFEVYF
EEEDFDKFADRLKEYDIEYVHPIIEHSWGQRVVRFYDPDKHIIEVGENMKIVCKRFLNSGMTPEQVAERM
DVPMKFINACMR
>gi|260688797|ref|YP_003219931.1| hypothetical protein CDR20291_3456 [Clostridium difficile R20291]
MKGFERKNQLFSLCGLNCGLCPMLLGNYCGGCGNGNQSCRIAKCSLEHGQIEYCYECKQYPCEKYQHIDD
YDSFITHKRRKADLERAKNIGIEQYNLEQQEKTQILSYLLSNYNDGRRKTFFCVAVNLLELSELQEAMKQ
IQSNDELTLLPFKAQCLYVVEVFQKIAERRNIKLKLFKKK
>gi|260688798|ref|YP_003219932.1| hypothetical protein CDR20291_3457 [Clostridium difficile R20291]
MTNGGIPLETVELRFQYTQSEYIKAERQYLISSKTIHKYDIALVAVFLLLSVVYMLFSSFSVFSILIFGL
IIVVTALGSYLYILMPILKFKQTAKYHEEYTLVFSKENIKFKTQSIDSEVKWDIYSALWESHDFYYLIQA
PRLYTLIPKRIFKDLNEKQLFEEIAQSRVKTTKHI
>gi|260688799|ref|YP_003219933.1| putative conjugative transposon FtsK_SpoIIIE-related protein [Clostridium difficile R20291]
MRMILNKGHRIRARDKNLVYHFSIGTLLFVFVAVLLLLNIKQLMRTDWEHFSLLDNGLTLSPYNFITILI
ATGICALVAFLYYRFCYDSFKKLLHRQKLARMILENKWYEADTVQDSGFFTDLQSRSREKIVWFPKIYYQ
MENGLLHIHCEITLGKYQDQLLRLEDKLESGLYCELTDKTLHDGYIEYTLLYDMIANRISIDEVKAENGC
LRLMKNLVWEYDVLPHALIAGGTGGGKTYFLLTLIEALLHTNAVLYILDPKNADLADLGTVMGNVYHTKE
DMIDCVNAFYEGMVQRSEEMKQHPDYKTGENYAYLGLPPCFLIFDEYVAFFEMLGTKESVSLLSQLKKIV
MLGRQAGYFLIVACQRPDAKYFSDGIRDNFNFRVGLGRISELGYGMLFGSDVKKQFFQKRIKGRGYCDVG
TSVISEFYTPLVPKGHDFLQTIGSLAFVRQDGTATCEAKGDGTD
>gi|260688800|ref|YP_003219934.1| putative conjugative transposon replication initiation factor [Clostridium difficile R20291]
MAGISREHLSRIEAGKVALTEDMKHKLLEAVEKFNPDAPMFLLFDYVRIRFPTLDIQHVIKDILKLNIDY
MLHEDFGHYKYTEHYYIGDVFVYTSQDKEKGVLLELKGKGCRQFESYLLAQERSWYDFLMDALVDGGVMK
RIDLAINDRTGLLDIPELIEKCKNEECISKFRSFKNYGSGELVKHNEANKDGMGHTLYIGSFTSEVYFCV
YEKNYEQSSKLGIPIEEVPIKNRFEIRLKNEHAYYAIRELLTHYDAELTAFSIINQYIRFADKEANKRKS
DWKTNARWSWFIGEGRPPVKLTTKPEPYTLQRTLNWLQRQVAPTLKMLKQIDAGNQMDYLKTIEQQAKLT
DKHKQIIRQQTASVDELIEKEKE
>gi|260688801|ref|YP_003219935.1| conjugative transposon protein [Clostridium difficile R20291]
MNFGQNLYTWFLSNAQSLVLMAIVVIGIYLGFKREFSKLIGFLVVALVAVGLVFNAGGVKDVLLELFNKI
IGA
>gi|260688802|ref|YP_003219936.1| chloramphenicol o-acetyltransferase [Clostridium difficile R20291]
MGMEYKYTKIDLNKWNRGKLFQSYIDNMRIVMSLTVDIDVTKFIEFSKKHDLKFYPAMIWAVSKVVNEHD
EFKYSWDNNGNLIKWDYISPSYTEFHKEDENFTKIVTDFSDSIFEFHKRFILDREKYKTERAFVENQSLN
FFDVSCLPWVKYNHFDVHVFDEGKFLAPVITWGKYELEQERYIMPLTMNIHHAVADGFHLSRFFNEVQEL
INSI
>gi|260688803|ref|YP_003219937.1| conjugative transposon protein [Clostridium difficile R20291]
MNEMRVCIESRLHTSEEIRSAWFTLPIDEEELEEQIGVPIDSEDYHIVEKELPFADEVGEDATIEKLNDL
YHTFESLPADLQEDYGELMCYFTSLDELHQHRHDVIHYSWCKNMADVARHLLDNDPAFSAIEERLTRYFD
YEAYGQYLDDNGEFIETDHGIYELP
>gi|260688804|ref|YP_003219938.1| conjugative tranposon protein [Clostridium difficile R20291]
MVEDMRVYIANLGKYNEGYLVGDWFSFPIDEEDVAERIGLNERYEEYAVHDTENFPIEIGEYISIEELNE
MYEMICELPDYITDSLDEFVSNYGSLEELYDHRDDMILYAGCEDMTDVAYYFIDELQALGDIPPSLQNYI
DYEAYGRDLSFEGTFIETRYGMCEIPW
>gi|260688805|ref|YP_003219939.1| conjugative transposon protein [Clostridium difficile R20291]
MFPIKYIDNNLVWNKDNEVFAYYELIPYNYSFLSAEQKFIVHDSFRQLIAQSREGKIHALQIATESSSRS
IQEQSKKLVTGRLKDVAYQKIDEQTEALVSMIGDNQVDYRFFLGFKLMVTDQSMNLKSVKQSAFLTFKEF
IHEVNHTLMNDFVSMPNDEINRYMKMEKLLENKISRRFKVRRLDKNDFGYLIEHIYGRDGVAYEDYEYSL
PKKKLKKETLITHYDLIRPTRCLVEESQRHLRLEHEDSESYVSYFTVNAIVGELDFPSSEIFYFQQQQFT
FPVDTSMNVEIVENRKALSTVRNKKKELKDLDNHAYQSGSETSSNVVDALDSVDELETDLDQSRESMYKL
SYVIRVSAPDLDELKRRCDEVKDFYDDLNVKLVRPAGDMLGLHSEFLPASKRYINDYVQYVKSDFLAGLG
FGATQQLGENTGIYIGYSVDTGRNVYLQPSLASQGVKDTVTNALASAFVESLGGGKSFCNNLLVYYSVLF
GGQAVILDPKSERGNWKETLPEIAHEINIVNLTSDRENAGLLDPFVIMQNVKDAESLAIDILTFLTGISS
RDGEKFPVLRKAVRAVTQSDQRGLLHVIEELRKEDTPISCNIADHIDSFTDYDFAHLLFSDGTVQNAISL
DNQLNIIQVADLVLPDKDTTFELLSVSMLIVISTFALDFIHSDRSVFKIVDLDEAWAFLNVAQGETLSNK
LVRAGRAMNAGVYFVTQSSGDVSKESLKNNIGLKFAFRSTDINEIKQTLEFFSIDKEDENNQKRLRDLEN
GQCLLQDLYGRVGVVQIHPVFEELLHAFDTRPPIQRNEVE
>gi|260688806|ref|YP_003219940.1| conjugative transposon protein [Clostridium difficile R20291]
MKERIKSVFTRKKIFRFLKMALFVVALSLILLSLLGTVAHATGLVDDTINTENLYSKYPLSNYQLDFYAD
NNWAWLPWNWLDGIGKSVQYGLYCITNFVWTIRLYLSNATGYVVQEAYKLDFINDMADSIGRSIQTLAGV
TQNGFSTSGFYVGFLLLIILVVGIYVAYTGLIKRETSKALHAVINFVVVFVLSASFIAYAPDYIKKVNDF
SSDISTASLDLGTKIMLPDSDSKGKDSVDLIRDSLFSIQVQQPWLLLQFGNSGIEEIGADRVEALVSASP
EDEDGKTREEVVKTEIEDNDNNNLTILQVVNRLGMVFFLLFFNLGITIFVFLLTGMMLFSQILFIIFAMF
LPISFLLSMIPSYESMAKQAIVRVFNTIMTRAGITLIVTVAFSISSMFYNISTDYPFFMVAFLQIVYFAG
IYMKLGDLMSMFSLNAGDSQSMGRRIFRRPYLFMRHRARRMEHRLARAVSAGGVAGAVAGGVVASSKSTR
QNGTKNNRGNTSSSMGQKAGSAVGAVLDTKNKVKDKATAVKENIKDMPTQTAYAVHSAKEKAKSSVSDFK
RGVVQEKENRQSGRLKKQQLHRQNIADKRMELQKAQESRQAGKKTDGSATSGATRPHERPATTSKVNVEK
QQEVKRPAIASTVKNDEPIKKNVVKERPLSSGDTSAKTVNQETTRQNYKTDRVTKTTVQKHTQQNTEKNK
RTVFKKGQKKK
>gi|260688807|ref|YP_003219941.1| putative cell wall hydrolase [Clostridium difficile R20291]
MKLRHIAIVGSLFSILFSLVLFFGVLISAEDDDGGNGYSSNYVGMNLSAEVLKHQPMVEKYAKENGISEY
VNVLLVIIQVESGGTAEDVMQSSESLGLPPNSLDTESSIKQGCKYFASLLSSCKNQGISDINVVIQSYNY
GGGYVGYVAGNGKKHMFNLAENFARDKSGGQKVTYTNPIAVAKNGGWRYGYGNMFYVELVNQYLVVNQVS
GELAQKVMNEALKYQGWKYVYGGSNPNTSFDCSGLVQWCYNKAGVSLPRTAQNQYDATQHIPLSQAKAGD
LVFFHSTYNAGSYVTHVGIYVGNTQMYHAGDPIGYADLNNAYWQQYLICAGRIKQ
>gi|260688808|ref|YP_003219942.1| conjugative transposon protein [Clostridium difficile R20291]
MFKKKEKPVKETKVRTMKVGTHKKSVIALWVVLIASVSFGVYKNFTAIDMHTVHETETIQLRLNDTNGVE
NFVKNFCKSYYTWDNSKEAIEARTQAISNYLTKELQDLNLDTIRTDIPTSSTVTNVLIWDIKQSGTNDFI
ATYEVDQQIKEGEQTSNVKATYTVKVHVDKDGDMVIVQNPTIAPAIEKSDYEPKAQEADASVDADTVNDA
TAFLETFFKLYPTATEKELAYYVAGNVLEPIGRDYLYSELVNPMFTDDRDNVKVRVAVKFIDNQTKAMQV
SQFELVLHKDSNWKIIM
>gi|260688809|ref|YP_003219943.1| hypothetical protein CDR20291_3468 [Clostridium difficile R20291]
MYKEVGISSNNVPITLSIWYTERNSPTIVFLPGTMSHPLMYENFLCGLSERGFNIIGIHYLSHGKSPKIK
KNYTMEDLLHNVYDATTYGIENFGENIAVMGSSQGGILAAMAAGRDTRLKAVFPHNIMLTTLKETMSLTK
YPAWSHRFMGLIQLGFRVGGKLLPNYKVPGDAYLDYDRVFYSEQAKQDCLNDPMLLPYYPLRFVASLFNA
DLSCLENGAIQCPVILITAKGDPLFRFDYTNKVFDLIHVPKKELLTLELNRHMIFNEDTDTTINALEATL
HKYLG
>gi|260688810|ref|YP_003219944.1| transcriptional regulator, tetr family [Clostridium difficile R20291]
MSLPRFTEQEKEIINSKLLIEGEKLFSLYGLKKVTVDDLAAAVNISKGSFYAFYPSKEHLYVEINFRLQK
ELFTSIETTVKKKKYKNHRDLAKDVIMLSLTGVITSPILSQIDLSLMDYLQRKISSDIFENHMYSDIRIL
EILEGLGVVFLVPHTVIIKSLYSVLSCLEQFKEDEELNMVQNLLVNGIIQQVVAE
>gi|260688811|ref|YP_003219945.1| abc transporter, atp-binding protein [Clostridium difficile R20291]
MAKQIFYSLYDYISINVIKLKEERIMIDVKKLYFSYTDKPFVENVSFHVGRGEIFGFLGPSGAGKSTIQK
ILTGLNTSYKGSVKVAGTEIREHTNRFYENIGVDFEFSTCYEKFTARQNLAYFASLYDKQPRSIDELLHM
VGLENDGDKKVADFSKGMRSRLNFIKALVHDPDILFLDEPTSGLDPTNNRLMKDIILAEKKRGKTIIITT
HNMYDATELCDQVAFIVAGKVSALDSPHNLIMSRGAAKIHYTYYDKGEKTGECLLDRTTEDKLLKSLISE
NRLLSIHSSEPTLNDIFVDITGRTLQ
>gi|260688812|ref|YP_003219946.1| putative abc transporter, permease protein; putative abc transporter, permease protein [Clostridium difficile R20291]
MRLGRLICGDIHFQWKYGFYFIYFILTVLYVCGIAALTGHWKTDIASIMIYSDPAAMGLFFMGAIVLLEK
SQKVLNAMVVSPVKVSEYILSKTIALIAISTIIAVILGFVSGSNHLLGIAVGTALTSAIFTMLGIIAATK
ISNLNQFLIVIMPIEIVCFVPPIVGLFVKLPDIFRFFPFTACMNLITGKSILLSFDMVLVIATLIILYIV
ARHTVKHMWRSLGGVKL
>gi|260688813|ref|YP_003219947.1| putative abc transporter, permease protein [Clostridium difficile R20291]
MKRILSSTIQVFKQIKSDPMMFAACFTPFVMGALIKFGIPFLDGITDFSLQTYYPIFDLLLSIMAPVLLC
FAFAMITLEEIDDKVSRYFSITPLGKSGYLFTRLGVPSIISAVIAFIVLLLFSLEKLSIGMTICLALLGS
VQAIIVSLMIITLSSNKLEGMAVTKLAALTLLGIPAPFFIDSYYQFAVGFLPSFWVAKAMQNEAVLYFSI
GLMVALVWYYFLIKRLFRKLAG
>gi|260688814|ref|YP_003219948.1| hypothetical protein CDR20291_3473 [Clostridium difficile R20291]
MEKGRLLQNENINKAIQVSKITLIINLGLSLLKFAAGYIGKSSAMLSDAVHSASDVLSTIVVMVGIKISE
KQPDKEHPYGHERMECVASIILSVALAITGAGIGYSGIKKIFSGQYNTLSVSSGIALTAAVLSIVIKEWM
YWYTRSAAKHTNSDALMADAWHHRSDALSSVGSLIGILGARLGYAILDPIASIVICGCILKAALDIFKES
INKMVDHSCDNATETKIREVVLQQQGVDGIDELKTRMFGAKMYVDIEILADGNLALYDAHRIAEGVHQTI
ENNFPQCKHCMVHVNTNELPYSP
>gi|260688815|ref|YP_003219949.1| hypothetical protein CDR20291_3474 [Clostridium difficile R20291]
MRAFLIPEKFFNYFHFFGSKSHLAVQIWCGKRDKHFSIHSWKGGEIMKPSDFQKTIQCQFECKLKKVVKG
IIWNYRKELRRRKNKEISFSELPDITVESLATWDDYETNYTIFNVCGIDIKVLDDELAEALKQLPEKNVT
MY
>gi|260688816|ref|YP_003219950.1| integrase [Clostridium difficile R20291]
MKRQDSKGRNLRLGESQRKDGRYVYKYTDIFGKPQFVYSWKLVPTDKTPAGKRDDISLREKEKQIKKDLD
DGIDTVGGKMTVCQLYEKKNNQRKNIKRNTELGRQYLVNALENDPLGMRAIDTVKQSDAKEWAIRMNGKG
YSYKTIDNYKRSLKASFYMAIQDDCIRKNPFNSKLSDVLEDDTEAKVILTPEQEEKLLAFMETDNVYSKY
RDEVILLLETGLRISELCGLTTHIDMLNRVINIDHQLLRDTEVGYYISKAKTKNGKRELPLTERAYQALK
RILKNRGKAQPLVVGGYSNFLFLNREGLPKVAGNYESMVRGLIKKYNKTHKDKLPNITPHSFRHTYCTNM
ANKGMNPNTLQYIMGHANITMTLGYYAHGTFQSAKAELERLAS
>gi|260688817|ref|YP_003219951.1| MerR-family transcriptional regulator [Clostridium difficile R20291]
MFSIGMFSKINKITTKTLRYYEDIGLLKPEYVDEFTKYRYYTTEQLPKLHQIITLKQMGLSLAEIKKAVE
NPEEVENILMNKEKEMLDVIKSEEYKIIKLRNYLMNLKGEVNMNDVIIKSLPKVKVASMRKVLKGYDELF
NLFPNVMAEEMMKTGCTCAVPDYCFNIYHDGEYRETDMDVEMCQAINDLKEDTDILKFKELDAVENAVCI
LHNGPYSTLGKTYADAFKWIEDNKYKVVGNPRESYIDGIWNKESEEDWLTEVQIPVKRIL
>gi|260688818|ref|YP_003219952.1| putative na+/h+ exchanger [Clostridium difficile R20291]
MTELMIISGLVLLICITSSKVLYKFGVPILLIFILLGMLFGSDGMVGIYFDMFFGGFGTNWNMAKPVAIP
SILMSSLGVIITSGVTGMFCHMVIGTSLLEGLLIGAIAASTDAASVFAVLRSQKLNLRGSLASLLEVESG
SNDPIAYMLTLILLTLMNNSGVELIAPMVIKQIAFGLAIGFILAKLSVYILRHSNFEIEGFYTIFITAIA
ILSYAFSEYLGGNGYLSVYISGIIIGNSRIPLKKSLVHFFDGISWIMQIMLFFMLGLLSFPSKLPNVFGI
AMAISIFMIVIARPLATFIVLAKFKFSNKEKLFISWVGLRGAASVVFAIYAVTQGVAIENDIFHIIFFIA
LLSVGIQGSLIPTVARKLDLVDDNTPVLKTFNDYDGEISSKLIEVNVDEGNKWANKSIIDSNIPDDILIV
MIKRKEQVLIPKGSTIIKTGDILVLSGDRIEELIQL
>gi|260688819|ref|YP_003219953.1| transposase-like protein b [Clostridium difficile R20291]
MAVVEKAYKFRMYPNKKQQELINKTFGCCRFVYNKYLAKRIEVYKNDKETFAYKQCSSDLTNLKKELKWL
KEPDKFSLQNALKDLDNAYEKFFKKKAGFPKFKSKKINRFSYKTNFTNGNIMYCGQHIKLPKLGMVKIRD
KQVPKGRIPNATISKEPSGRYYVSLCCTDVDIEAFENTNNQIGLDLGIKEFCISSCGEFIENPKYLKKSL
NKLAKLQRELSRKTIGSLNRNKARLKVARLQEHIANQRNDFLQKLSTKLIKENDIICIEDLQVKNMIRNC
KLSRLISDVSWSEFIRQLEYKANWHGRQIVKVGKFFASSQICNKCGYKNEEVKNLNIREWICPSCNETHD
RDINASINILKEGLRLITIQNK
>gi|260688820|ref|YP_003219954.1| hypothetical protein CDR20291_3479 [Clostridium difficile R20291]
MVNMNIIEIRSDKIYKKIMDAPINKKEDIYRYELMKPFEFKWKCMNVPIVARQKGGYDVIIASEMLGVLS
PKDIDEKQKKNINVLSADKIWGTCKETIENSINAFIKEGYDLNIKDYKYSILLANPNSPYTILSDGYWGD
GGIPGYIFLSLVPNEYTINRLPVLIAHECNHNIRFQFIEWNNNITLEEMMINEGLAENFATWMFGEEMLG
PWVSRTDIETLNTYIKPIIKSALKETGFQNITSYLYGDDIAKMQGYFPVGLPYCAGYACGYYMIKYYLEK
TNKSIIEATLLPYSEIIETVKEFWE
>gi|260688821|ref|YP_003219955.1| hypothetical protein CDR20291_3480 [Clostridium difficile R20291]
MVMLTPYLIFNGTCEKAFNFYAEAFGGGKTIFARLDSNPNNPIMHASVTFTKYEGCIMGADTDKPVVISG
MAICVVLPSREAIEEISVKLAEGGTLVQEFLPHPPPHQNDGAAEVLDRYGYTWYLST
>gi|260688822|ref|YP_003219956.1| putative acetyltransferase [Clostridium difficile R20291]
MKSGIILEMKQINSTEYDEMLQVWESSVRATHDFLTEKDIESLIPLVEIGLKEVENIVCIKDNDIIKGFI
GIDKDKIEMLFIEDKYRGNGIGKKLIKYAIDKYNVKYVDVNEQNKKAVGFYIHLGFKVFDRSEIDGQGNP
FPILHMKLI
>gi|260688823|ref|YP_003219957.1| hypothetical protein CDR20291_3482 [Clostridium difficile R20291]
MYDDYKYNKCNKCYNDYEEMTHVHEYSESVKLAEECEDRHNHRAAGVTGEAIPINGGTNHVHKINDNVDF
LDHFHKICVTTGPAIRIPGTDKHIHLICGETTVNDGHCHKFLFTTQIEAPLV
>gi|260688824|ref|YP_003219958.1| hypothetical protein CDR20291_3483 [Clostridium difficile R20291]
MIDIHKNIYDNKLFEELKIDCKKCFGLCCVALYFSASDGFPIDKESGKPCINLQPDFKCSVHNSLMKRGF
KGCTAYDCFGSGQKVAQVTYKGIDWMQSPELTNQMSEVFLIMRQLHEMLWYLKEASVLNISDTIKSKIDL
IIEETEKITNMSPEQIINLDIISHRTKVNLLLSQASESVMGKVKSFIKTSTLKNMKKLSKNIDLIGADLR
KINLIGADLRGRFLIAANLRSTDLSGANLIGADLRDCDIRGANLENSIFLTQLQVNTAKGDSSTKLPASL
IRPKYWEK
>gi|260688825|ref|YP_003219959.1| putative phosphonoacetate hydrolase [Clostridium difficile R20291]
MENLPNCPKCNSEYTYEDGTLLVCPECSHEWALGLGAEEDSNIIKDVNGNVLNDGDSVTVIRDLKVKGSS
SSIKIGTKVKNIRLIHDSSDGHDIECKIDGFGAMKLKSSVVKKA
>gi|260688826|ref|YP_003219960.1| putative ABC transporter, ATP-binding protein [Clostridium difficile R20291]
MISLINISKKFKDKSIIDKFNLEISKGEFVAITGNSGSGKTTLLNIMGLLEKPNSGDIIINNIKNPNSKQ
IRILQRDFYGYLFQNYALIENENVENNLKIALKYQKNINHNEKINYALESVGLRKYNKKKIYELSGGEQQ
RVALARVILKECEVIFADEPTGNLDKKNRDIVFDILKNLNKNGKTIVFVTHDLELSEQADRVIKL
>gi|260688827|ref|YP_003219961.1| putative ABC transporter, permease protein [Clostridium difficile R20291]
MKKIIYVLFTIELLIVSLLGLNIVKDNEINNILYNDTTSISVMFKDYKKLNKNYSKWIKDIADENNVAIS
KYVFNNNEKLSIYTTDTSLNNNIKLKSGKFPNTNSNEFISNINTNNSNNSNQVGKFSTMSKDISILIRDF
GKISEVGESGILYISTQNEDTINKILRELNVDRSIFVARLHDRYVNSNLYLNPSIIRDLILIILCFLATI
IHYSISVSREASILRLNGYSKLDIIARVIKNIFRIMILSSVTALLIYIIYILKLNIGVRACLYFAMFSII
CILINILISILIVGFNSRSSKYVLSLNGKKSYGFVNIMHFTLKIVFVSFLILSINNCILNYNMLQTQLGN
LSEWDKAKNVYNLTLKDTGEQSLGKEEVIKNAKIKGFYKNLVEEKDAFLIDSTNFEKLEDGSYMYEINSK
GKNPEVSQYGKNIKINKNYLKVNPIYSNGKEIFNLIDYDDKTINLLVPKKLQVHENEIKKEFRELFYFEK
IEVENMYNKELNRELNKTKKSDLNVNIIYVDNNQSYFTYNSLVMDDNRNLIDDPIAIIDIDNIDDSFYLS
YISRCVYFNSKKLDALADISNIIEAQGVEAHIQSLHAVYNEYGLEINKLEKYLNSEIFTIIIIAISNLMI
TYNIVASYYERNKYKLYIKKIFGYSTTARSMLLIVSLILTNIIPIGIISTRVDLSNNIILFGLLILVIEV
IVSIVLDKIISNSSFNKIIKGEH
>gi|260688828|ref|YP_003219962.1| 2-keto-3-deoxy-6-phospho-gluconate aldolase [Clostridium difficile R20291]
MKKMNITKRMSECGALAIVREENLNRACEIAEGCIKGGITVIEMSYTLNNAGEIIQGLNKKYGEILCVGA
GTVLDSETARHAILHGAQFIIAPNYNEGVAKICNRYQIPYAPGCTSLTEAVDALSLGATFIKAFPISDFY
GPKLVKVFKTPIPDMPVLASGGINLENLHIWLENGVDVCGFGGLLTKGTIEDITENAKKIREIIKNIREI
>gi|260688829|ref|YP_003219963.1| putative dihydrodipicolinate synthase [Clostridium difficile R20291]
MKYKGIICAMITPFDEKQNINSQATCKLIDYLIEKGIYGLFILGTNGECHVLTDDEKVEFAKIVINHTNN
RVPVFVGTGGNSTREVIDLSKRMEAIGASALSIITPYFVTPTQQELILHYKTIANSVNLPIIMYNMPGKT
GINIEPESVRELSKIKNIVGIKDSSGKLDNMKAYIEVTQNENFSVFSGSDSLILDSLKAGSQGAVAATTN
FLTEIGISIYENFMKGDLEEAQKAQSSIEELRRILKLGTIPSVMKKTIVLNGINVGTARLPVTEPTGEVL
EEIKRVVENYRTILNKSSENR
>gi|260688830|ref|YP_003219964.1| putative sugar-phosphate isomerase [Clostridium difficile R20291]
MISRRIHLMENTLSEFLDNISNELSEFIASIDETSINKACELILEAEKNHGRVHVTGIGKPGHVSGYISS
LLSSTGTSAYILHGTEAVHGSSGQVVEGDVVIAISNSGETQELKATLKTLKVNGAKIIGVSGNESSFLKN
ISDIFLFAGVKQEGDCLNKAPRASILAETIVLQSLSVVLQYAKGLNTQQYLKWHPAGSLGKSIREGI
>gi|260688831|ref|YP_003219965.1| putative PTS system, IIc component [Clostridium difficile R20291]
MEFIISLLSTPAVLLGVVACIGLILQKKSAVEVFTGSSKTLIGFLIFGIGASAMTGALQNFNKLFQHGFG
ITGVIASPEAATALAQGTYGFAVSCTLILGFILNLVFARITKFKNIFFTTGHSLFFSCVLVLIMKAHGFD
NTITILIGGTILGFMSAALPQFCQPFMRELTGGDEQAIGHFNMIGYGLSGYIGRLFSKHKDDTTETIEFP
KWLSIFRDFLMGLSIVMLILFYIATLKAGQAFTQEIAGSTHWLVFPLIEAFTFVAGMSILMSGVRMFLAE
ITAAFVIISEKYIPGSRPALDVPTVFPYAPNAVIIGFISAYAAGLLAIAIMASFPSIFPVVIIPAAHICF
FSGGTAAIFGNTSGGWRGAIAGSFVVGLLLAFLPVILYPVYGTLGIEGATFPNIDYNVVGSILHNILQFI
KPI
>gi|260688832|ref|YP_003219966.1| putative PTS system, IIb component [Clostridium difficile R20291]
MYKILIACRAGVGSSLMLKIKTQQIIKENNFPIEVEHGSLDSLNGFNGDAVETLIDVAEELKNKNLKFDI
IGIHNIVDRNEIKTALEKFLASKEG
>gi|260688833|ref|YP_003219967.1| putative transcription antiterminator [Clostridium difficile R20291]
MVVDKEIVSILQILLNSTLITTNGLQEESNSSKRQITYRINKINDMLKVKNVPLICLRADKDIIVRKETK
KAIKEILEKNYSKNTYYFSKTERLLYMYLMLFINMEDISINHFINSIKVSRSTVNLDFKDLIPELEKKNI
KVKNNRINGYYIVGNEMEIRRVLIKNIIETLSNEKSSRVFDIFIKEYNLDSFEEAKKIILKLIKKYEITF
VEDRLIEFIYIFIFLKARMYSTRIVTQENVDIPNISVMSSMKEYKFAKELLEVYGSEDKIKPYNIMYISA
WILGISVGNYEEDTEDKDVISKIVNKMMTKFGYLSGVYYISQEKIFKQLYSHFRPAYYRLLFKLPIYNPI
CEKVKEEYKLVYRIVSNAMKEFCGLFGEEIQEEELAYLTMHFATLFSNKKEFDGFRKRIALIVCSNGVGS
SAILHAELTNLFPDLHFIPMSESVGLENISEPVDIVFTTNYNAEGLKTDVPVIKVSPVMTTKEKYKITRE
VYIQLGDIYLRQPKIDEVMDIIKKYANVTSESILSSELLAYFTQIENFTSKEGEGPMLSEITNETLVKIK
VKAKNWEEAIRQSASVLVENNKVTEGYVDAMINSAKASGPYIVITKHVALPHARPEAGSKEIAIGIATLD
SPIEFGNNENDPVKYVFCLSAIDNNSHLRAMSELVELLEEDEFFKVLDSAKEAKEIIDFIKTHEL
>gi|260688834|ref|YP_003219968.1| hypothetical protein CDR20291_3493 [Clostridium difficile R20291]
MAMGFEFKIMRSLIYVGLAKEEYRPKLMDWLYRHHIPDSISTFGPYCTKYAFYQAYPTPNEGERFGARKM
QLTEHYWLVDEHMPEMANRIMTEYMPMDVLRWQGCIPDVENKRVHENAESGDAGRAVGGDNGCPPFIFAF
VPINWEEDFRGKGRTVQDGPNYRWQFMIKYPDGISKEEGEKWFYDEVVPYFTNCCYVNRFVSSKIMINYG
ATAFDRVSELWFEGEEEWYKAVVEETKSFIKKPEWAQEEEFPYLKPQFNIASVFLGDIATMDAYSQYRGY
IPMR
>gi|260688835|ref|YP_003219969.1| hypothetical protein CDR20291_3494 [Clostridium difficile R20291]
MDRKKKEILTLSMGIALLPPLWAVLAPYIGIKTGAVALICAGLYVTNGNKQKDGLKIMFGFWCGDLWAVL
AILIMGYMNFNQNLELFLTLSILGFFAVVIASLFEKIIFLPSWLCGWAIGLTIMTGENIINLQDICIQIA
VAMAVGVWYVGAGVDLFTIYILSKDKKKGN
>gi|260688836|ref|YP_003219970.1| putative phage-related protein [Clostridium difficile R20291]
MNEKPSFKQIEIILAVIFLVLTYYKIGLTPAFIVIFIPLYLSYFAVSMIVNQIAIKLLEIRQAREATNYN
IGNG
>gi|260688837|ref|YP_003219971.1| hypothetical protein CDR20291_3496 [Clostridium difficile R20291]
MKILGISFGTKNGNNDTMCKVALKGAKEAGAEVEFIQMSSINIKHCTGCCACVKTLLSGKGSMCVLKDDF
EWLLDKMKDADGIVVSDPIFEEGASGLFHTIMDRFGPRADRGNNIIGTKVAEAIGGKIPDSRMLNDKVIS
FMGIGGSDWGTRVQCEHAMLALIPMWKVIDNAWFPWAKELVMDDTRLVQVHQIGLNIVEAAKDFEKASYQ
GEEGVCPHCHNRLFYLESGTKKAICALCGIVGELDTISGKTIFSFPEEQLGHAHDTLPGKFIHGDDIKKM
EGHYAEVRKTQEFKERKTSYNFIEPLTKEKQAGVSLG
>gi|260688838|ref|YP_003219972.1| hypothetical protein CDR20291_3497 [Clostridium difficile R20291]
MEDKFYAKGNGNNGYIKNLEVCSFNNLDGTCGMFQMALYKRDEKYYLYGCCFGGNKKNGVMISDITDPYN
PQFIKHFQMLDPKEYPTTTTPKIQIADDLMIVAMSCGSGPGALVDQAKLANIKCEAGIRIYSLKEDPLNP
KFLGYWDCGLKHVMGVHRFMYNGGRYVHLSSDCVGFEGLIYRVIDIINPNNPVEIGKWWRPDQYADGYPN
RTFDAGAPHCPEFMDKGWLHGPPFVRDGKAYCGYGGAGLVVLDVEDLTRPRCLGELPFMPAFSSRLAGAR
THTALPLPGRDLVVVQNEGERFQFFKPDNITDVQAMNNIHMVDVSDPTKPTLIAQFPYPEVPKDFPYPNF
NVAGLGKAGPFGPHNLHEPMDNKPWLEQRGDRVYCCYFHAGLRVYDVSDPYYIKELAYFIPPNPNKTPEE
SYFPGFPGPRLAVTEDLIVDDRGYIIIDALDDGFYILKMKED
>gi|260688839|ref|YP_003219973.1| LysR-family transcriptional regulator [Clostridium difficile R20291]
MNTKQLEYFISVAENLSFTKTAEKFYISQTAVTQQIKALEEQINVTLFTRSKRHVELTPAGKVFLSEART
IIKNINDAIAKTQQFAHGFFGTLSIGTLIGYEKNKLQQYLKEFSNTYPNISMDICTNEITELLNLVKNNS
MDLAFVINPENQPLKDFEYKTVERYSLVALLPPGHPLYNEDSIDLIELQHDKFIFVKETGDEYGQKSMIQ
NRYREAGFVPNVVQRSNNLNTIESLVSSNMGISILPSFCVTDTMIERDIAIVPIKEVENRIEVVVVWNKK
NTNPALEKFISII
>gi|260688840|ref|YP_003219974.1| putative carbohydrate kinase [Clostridium difficile R20291]
MNILAFGEIMMRLSVPDYKFLTQTNELNYIITGTGLNILSGLKNFGYNTYMLTKLPNNNVGKASSANIRK
LGVKDDFITYGGNHIGVYFLENGYGERPSEVTYLNRLNSSFCESKLQDYDIDKCLEEMDIVHICGIAMQL
TDSVKKIALELARKSYEKGIKVFFDFNFRQSLNPERTYDDLVNDYKKILPYCHGLFASYRDINKILNIDS
LNIKSSSELIKKEYDIDIVAGTMRRFDDMNNRFIKGYISNDDGYFESREYKLEIYDRVGAGDGYVAGIIY
SYLENMKSEDIVEFGVASSVLAHTTYGDNSLVSTGHVLRLMNNEKIDILR
>gi|260688841|ref|YP_003219975.1| hypothetical protein CDR20291_3500 [Clostridium difficile R20291]
MEGINMNCIPQYYKNRVCLNVLAGSIKNAKEVYDACDGHVLVGVLSKNYSTVEAAIEDMKKYSKEIDNAI
SVGLGAGDPNQSNMVSQISKELQPQHINQVFTGVATSRALLGQNDSIINGLVSPTGKPGFVKISTGPLSS
KEKDGIVPIETAIAMMKDMGGSSIKFFPMGGLKTKDEYIEVAKACAKHNFYLEPTGGIDLDNFKEIVQIA
LDAGVEKVIPHVYTSIIDKETGDTKVEDIGVLYKIMKELLG
>gi|260688842|ref|YP_003219976.1| putative selenocysteine synthase [Clostridium difficile R20291]
MSSIFEKYSVRRVINASGKMTILGVSTVDKEVIEAIGEGCKNFLIIEELVNKTGEYIANLLGCESALIVS
SASAGIAQSVGAMIAKDDMSLVYNVNNPKKQVKREIIIPKGHNVDYGVPVEVMIRLGGGEVVEAGYANMC
NKEHIIREINENTAAIMYIKSHHCVQKSMLSVLDAVQVAKEYNLPLIVDAAAEEDLNVYYELGADLVIYS
GAKAIEGPSSGLVIGKKKYIDNVKLQSKGIGRAMKIGKENIVGLTCAIERYISNDKVTLKEMEDKLNPFI
DKINTIKGVSASITRDSAGREILRGEINFNEDIINKSTQQIINELRSGEIAIYTRDYKANEGKIEIDIRS
VTGSDLDNIYNRIKNIVES
>gi|260688843|ref|YP_003219977.1| putative amidohydrolase [Clostridium difficile R20291]
MKIDILIKCGKTVDKSIIDIAILDDKIIEVKNHIDDSKYQAKQIINLDGEKFISAGWIDIHTHCYERLDL
YKDYPDEVGIKSGVTTVVDAGTTGALDIGEFYEDTKKYKTNVYALINIAKQGITSQDELSNMMNIDEYEL
KNAVRKYKDFVVGIKARMSKSVVISNDVEPLKVAKRIKNELNLPMMVHFGSSPPTIEDIFDYMEKGDILT
HIYNGKPNGILRGNEVKKEIIEAKERGIILDVGHGTESFSMDIAMKSKDAGIFPDTISTDIYIKNRINGP
VYNLSTTMEKFIYMGYSLEDIIDKVTKNAADAISLKNKGLIKEGYDADLTIFDVVNEEKELQDSLNKSVI
TSTSIKPRAVVVNGEYLNIGNSIEENE
>gi|260688844|ref|YP_003219978.1| hypothetical protein CDR20291_3503 [Clostridium difficile R20291]
MERRLGISVYPEHSNMEDDKAYIKMVSKYGFKRIFMCMLSITRPKEEVKKHFKEIITYARELGFEVILDI
APNIFDILQISYDDLTFFSELNASGIRLDYGYDGSKEAMISFNPYDLKVELNMSNDVAYLDNIITYKPNV
NNIYGCHNFYPQRGTGLPYDFFVRCSNRFKKYGIRTAAFVNSKYATIGPWNINDGLCTLEMHRNLDIATA
TKHLFATGLIDDVIVGNAYASEDELKRMSEVNEYQVVFNVVAKEKTSEVEKIIMVNEQHFRRGDITNQVA
RSTEVRKKYAKENFPKHDNKNIFKRGDVVIGNDDFGKYKGELQLILQDCTDERKNKVGRIKEDEIILLDF
IEPWSKFKIILEGE
>gi|260688845|ref|YP_003219979.1| PTS system, IIc component [Clostridium difficile R20291]
MEKFASFLERKIMPVAAKISNQRHMRAVRAGIIATLPLTIVGSFFTILLNIPIDAYMDFIAPFKATLDIP
FRYTVGFLSLYATFGIASSLAKSYDLDTTGVGMLAVMAFLVSTIVPTQVVEPVGGVIEAGRWMDMAKLNS
PSLFGAIVTSLITVEIYRFMKEKNITIKMPAGVPVEVSNSFTALLPTAVILMLFWVIRHILGFDISVALS
AMLSPLKGFLSGNSLGGGLLTVFLITLFWVLGIHGPAIMGPVIRPIWDMSIAENITAFTEGVSAHAMPNI
FTEQFLQWYVWIGGAGATLALVVMFMFSKSQYLKSLGRLGFLPGLFNINEPIIFGAPIVMNPILGIPFII
GPIIMTILSYVLTITGVIPMMVARLPFAMPAPIAAVMSTNWSILAGILVLINFVISFAVYYPFFKVFEKQ
QLQREQEEMSENL
>gi|260688846|ref|YP_003219980.1| GntR-family transcriptional regulator [Clostridium difficile R20291]
MLRNQPLYIQVVDILKQKILNNEYKIDENIPTERELEQEFGVSKITIRKAIEILESEGYVEKKSGKGTKV
ISNSLFNKLSKAESFSSILLSKGHKLSKKTISIEKIINDTNSQVFSIFGEKCSKITRMYYLDSKPYIFFT
HYIPFDENLTVESFNNESSLYMYLYRRNINITRFEDEFFIEESELEVSKALNLAKDILLGRKRKTYDEND
NIVELSFARYNTEVQNYVIKYEI
>gi|260688847|ref|YP_003219981.1| PTS system, IIa component [Clostridium difficile R20291]
MDEKIIEISFNIIGYAGEGKGLAFEAIKEAKNGNIEKAKELLKESKEVINKAHRYQTELIQNEASGNRTE
ISVILIHAQDHLMNGMNFQQLAEEIVDLHLKLQDK
>gi|260688848|ref|YP_003219982.1| PTS system, IIb component [Clostridium difficile R20291]
MIKIMLACSAGMSTSLLVTKMESAAKENGIESQIWAIPESTIQNEIEKCDVLLLGPQVRYVLPKAQEIAK
PYNIPVEVINMMHYGTVNGEAVLNRAIELNNTK
>gi|260688849|ref|YP_003219983.1| hypothetical protein CDR20291_3508 [Clostridium difficile R20291]
MNISIVVVGKIKEKYLKLGIDEFKKRLSKYCKLEIIELDDEKAPENLSVKEMEIIKDKEGKKILGKIKHN
SYVIVLAIDGKGLSSEELAKTMSDLAVRGNSSLCFIIGGSLGLSDEVLGRADYRLSFSKMTFPHQMMRLI
LLEQIYRAYRINNGEPYHK
>gi|260688850|ref|YP_003219984.1| putative signaling protein [Clostridium difficile R20291]
MLKRNFENVEDNKILYSIKQGMILAIPAIMTGSTALVILNLPIKAYQEYLSGLFNGEVTNILNFINDSTL
GIISLIILLTISYSYGKIYGSKYTVLVPIVAMCSFLVFSHGNELNSYIEIFKTKWLFTSIIVSMTSSVLF
VKLTESFVTSVKFHTEGADADFNMVVSAIVPFIIVVFLFSIFRVIMISLIGSSNFQDIFYNLFSNVFNKM
GTNLMSALLFIFLMHFMWFFGIHGSNVLDTVAKNLFENSMAININLVNNNQLPTEIFTKTFFDTMVLLGG
CGSLLCLVIAIFLSEKRINVRKLAKIASIPALFNINEMLVFGIPIVFNYIMFVPFVITPIILTITSYVAM
STGIVPCTVSAVEWTSPIFLSGYMSTGSIRGSLLQVFNLCVGVMIYIPFIKMSQNRYTYMFKNNIENLTN
LLKRYELTGEQPNLLNHNGKIGSISKMLASDLKFAMKRGEIELFYQPQVNYNGNVVGAEGLLRWKHSIGG
FIYPPLVIILAKEEGFLDELGEYIINKACIDLKKSEKLLRNPVKFSVNISPDQLDDPKLPEQIKNIISSN
DINPNMLGIEITEQIALSGSQIIIERINAIHNLGIKLIMDDFGMGHSSLIYLQNNNFDIVKLDGSLVKEI
LTNKRSSEIIMTIVNLSKNLDFDIVVEYVENIDQRDKLYGLGCEIYQGYYYSKAIPFEEFVEYANQEKEI
>gi|260688851|ref|YP_003219985.1| putative metallo-beta-lactamase superfamily protein [Clostridium difficile R20291]
MLKYCSVGSGSSGNCHYIGYKNTNILVDAGLSGKRITTGLKDIGVDADKLKGIFITHEHVDHIKGAGILS
RKFDIPVFANIKTWCSMKDKLGDIKDKNMKVFENDKTYSLGDIIVRPFSIEHDASDPVGYNFYTESDEKM
SIATDIGCITQNIKKHLYKSKLVVLESNYDPNMLMMGSYTYALKKRVMSSTGHLSNEDAANFCVELINEG
TESILLAHLSKENNFPELAYETSKGVLASNDIVVGQDVKLDVLSRNDVSNVYEMK
>gi|260688852|ref|YP_003219986.1| putative peptidase [Clostridium difficile R20291]
MVLIIGCFIEKDDSLETYKEKTNSKINQYNMDVIFDDETKRLMCNQNVDYINNTKSNIDKIYFHIYPNAF
SKKDFAPFEKSEMTRAYPNGFNEGYIDIKNILNNNSKMEYKIKGDKNDILEIELGKELKPNERMSLDIKY
NVKIPNSIGRFGYGENTINVTNWFPIACVNDERGWNLKSYETIGDPFYSETSDFHVKLLIPNKYKIAHTG
KLIDDKHDNKKMLYEIEAENVRDFAFILSSKFDVNKVDSKGVAINTYNLNKKLSKKATEVAKDSINIFSE
LFGKYPYKEFSVVASDFFIGGMEYPMLVMIDQSLYNEKNEFLLEYVIAHETAHQWWYSAVGNDEISEPWL
DEALTEYSTIVYFEQKYGKDMANKLIKTMEIQTKSYLSENIFKPANEYKNSTEYSLNVYTKGAIAFNEIR
KEVGDKVFFETLNEYYNKYKHKNANGRAFVELWNSKGVDINKIISECK
>gi|260688853|ref|YP_003219987.1| hypothetical protein CDR20291_3512 [Clostridium difficile R20291]
MFFKESNEIDLGEITIPNIFIDIFMPMADGLYVKVYLLGYRQACDITSNPKFDNNSIAKNLNIPLSDVLS
AWKFWEEKKIIKIHDNGEYDNFNYSIEFLDLKNFYIENILSNNSSIKSNTDKVVSTSENPSIRKMFNSIN
KIVGRYLDPSEKMSIMDIMNKYNMSPDMILCAYEYVKDKTGTSKPVKYIEGIIRNWYDSNLYTPKDVEES
FLVRSERYILYKTIFNELGFSRQPSKSEKELMDTWFDKFNMDIDLIINACSKSKNISNPSISYINGIIKN
WNEKNIKNLNDLKQKEEERIVKENINKKQINTTQNNNTYKKTKFHNFNETFTQYTSDELDEIIKKSQKEK
FK
>gi|260688854|ref|YP_003219988.1| putative DNA replication protein [Clostridium difficile R20291]
MNEDKIRKILAKYAKRRDDNELLLEHRKNEVYNRIPEIKSIDDEISKIGLSLAKIVLLNPKSKDEIVKKT
KENIESLKVKKEKLLSESNIPLDYLEIKFQCISCKDKGFLPNGEKCSCLKQEIVNEAYKMSNLDRILSQE
NFSNFNLNIFSPKKGSDGEISPRENMLNNLSICENFVHDFKKDNSENLLFYGSTGLGKTYMCNCIAKELL
DKGNVVIYQTSFRILDILEDYKFRRDTNNQISEDNYKNLFDCDLLIIDDLGTELNNSFTSGEIFNIVNTR
LVAGKKIIISTNLTPSQIGNTYTQRTLSRILDKFRILEFTGDDLRWERFK
>gi|260688855|ref|YP_003219989.1| adenylosuccinate synthetase [Clostridium difficile R20291]
MKTVAIVGSQWGDEGKGKVIDYLATQADVVVRGQGGNNAGHTLVVEGKKYALHLIPSGVLNPNTVNIIGN
GIVFDPKGFLEELEMFKTDNISTENIKISDRAHVIFPYHKELDALSEEARGDLKIGTTKKGIGPCYMDKT
ERSGIRICDLMDKDKFAIKLKAQIDAKNKIVKNIYGKEELFDFETIYNEYLGYAEQIRKYVADTSVIVYD
AVRAGKKVLFEGAQGTLLDLDLGTYPFVTSSHPTSGGFAIGAGIGPNMIKDVVGIVKAYTTRVGEGPFVT
EQINETGDKIREQGHEFGVTTGRPRRCGWFDAVIVKYAARVNGLTSISFMLLDVLTGFDKIKVCTSYKMG
DKIITDFPASLDDLAKCEPVYEELDGWNEDITQIDNFDDLPENAKKYVAKIEELVGVSVDMVSVGPNRAQ
TIIRRNIFA
>gi|260688856|ref|YP_003219990.1| hypothetical protein CDR20291_3515 [Clostridium difficile R20291]
MEKISLKYIYPNIIKVLDEINLFRVIDNNLRESIVVYANNVDNQYHINMTNTNFGNIINICKLEKLLDVD
KFMEKVIKYEKEIIEKEEFSKIEEYMLNIGEY
>gi|260688857|ref|YP_003219991.1| replicative DNA helicase [Clostridium difficile R20291]
MEDMTRIPPHSVESEQSILGSILLDKDAIITVTETIKPDDFYKEAHKIIYECMITLSNKGEPIDLITLTE
ELRKQGHLNDIGGISYITSLSTIVPTTSNVKYYADIVKEKSVLRKLIKASNEIINLGYSGATKIEDVLEQ
AEKSIFDISQEKTSDDFKSINLVLMDAYDMIEKLYTNKSDVTGITTGFKDLNKKINGLQRTDLILIAARP
AMGKTAFSLNLVQNAALKGDASVAVFSLEMSKEQLVQRMLSSQSSVELKKIKTGTLNDNDWPRIIDAMAV
LSDAKIHIDDTPGIKISELRSKCRKLKIEKGLDLVLIDYLQLMEGEGNNESRQQEISKISRSLKILAKEL
NCPVVALSQLSRAPEQRADHRPMLSDLRESGAIEQDADIVMFLYRDEYYHADSESKNIGEVIIAKNRHGE
TGSVELVWLGEVQRFGDKLRDL
>gi|260688858|ref|YP_003219992.1| 50S ribosomal protein L9 [Clostridium difficile R20291]
MKVILLKDVKGTGKKGEMKEVSDGYARNFLFPKKMAVQADSVAIKELNEKNKSKEIKAQKEYEEAVLLGK
QMEEINIEIYSKAGEGGRLFGSITSKEIAEQLKKQKDIDVDKRKILLDEPIRSLGSTFVEIKIHQKVTTK
IRVDVKEKQ
>gi|260688859|ref|YP_003219993.1| putative RNA/single-stranded DNA exonuclease [Clostridium difficile R20291]
MSNKQTFKLNMPEINLYIIVIGISSIILLYYNLYVGCLFFCIFVYMVFHNWRTTNIRRHEWTEYIQNLSL
DIDETTKKAIINLPIPLCILEFDGNISWYNGKFYDMIGQKDLLDKNIEDIVKNLNLRKVLNENKEMYTEI
NYKEKEYTIIYNVIKNDQEKNPKYLMILYWIDKTEYLKVKQNYDDEKNAMMLIQVDGYDEVLKSAAEDKR
ALINVEVEKILSALELNSNGALRRTSKDKFFLVMHKKELKKLEAEKFSILDTIRHIDYGNNLPVTISIGI
GIDGDTLNENLKLATGALDLALGRGGDQAVVKTKDKFVFYGGKSKAVEKKTKVKSRLIGHALREVIQQSD
QVYIMGHKYPDMDAMGAAVGVYDICKSCNKTANIVLQSVNESIEIFINKINENNYYKKLFIGKEEAIDNC
TKNTLVVVVDTHRPNYTECEELLKLSEKVVVIDHHRRGVEFINDAVLLFHEIYVSSTCEMVTELVQYMDE
DVTINKLTAEGLLAGISLDTKNFAFKTGVRTFEAASYLRKVGADTIEVKKFFNSDVKDFIIKAEIIQSTK
IINNRICLAYSSTEIDSINVIIAQTADELLNIKEVEASFVLGEKDDTIFISARSLGQINVHVLMEKLGGG
GHIDIAGAQLKNVSLKEAYKMVNKIIEEYLEEEE
>gi|260688860|ref|YP_003219994.1| hypothetical protein CDR20291_3519 [Clostridium difficile R20291]
MSIIVLAIIIALVIAYIPMLGIFSMLAAVPYVIIGAITDRKYSLISILVTFCVLILFADISYALNICIMY
SLPGIVIGKMLKRSFEQEDSNKFEPIYGGTIIFVLSMLVYFFVLKTFLNVNLLDEVSKMISEIVNIQKNS
FSATELKVFDKMKPDEIVSYFTNMLPMMLFLQGLLSAFVTYYLSVFFIKRITKMNIRFPKFADFYLPGNA
ILTTFLLYLLVLFIQIIGSKLYTELIMTNLQLVFNLMFVIQGIAVCIYFLKKWIRQGPNKIMFFSGIILC
LFGFMGISFVGMVDSIIDFRKVRSYKST
>gi|260688861|ref|YP_003219995.1| hypothetical protein CDR20291_3520 [Clostridium difficile R20291]
MKIDKGSEITRNIKIIEWMKTEILMSVSDLFNLLFKGVKPLDEAIQDTLANIIMITYLLAKRLGISFRDV
DYKVKEKIKIGIDEDHSVERWYGDLSNLKKHMDNRE
>gi|260688862|ref|YP_003219996.1| 30S ribosomal protein S18 [Clostridium difficile R20291]
MMNKKRRKKKRVCQFCADKNAKIDYKSTQRLQKYITERGKILPRRISGTCAKHQRELTVAIKRARNIALL
PYTLD
>gi|260688863|ref|YP_003219997.1| single-strand binding protein [Clostridium difficile R20291]
MNQVVLVGRLTRDPELRYIPGTGTPVASFTIAIDRDYVKKDGSKETDFIPVEVMGKSAEFCANYITKGRL
VALQGSIRVDNYQTQSGEKRTFTKVSTRSVQALDSKNKSENSYRESAPAFEPSFEPQGLDPQGFQAIDDD
DIPF
>gi|260688864|ref|YP_003219998.1| 30S ribosomal protein S6 [Clostridium difficile R20291]
MRNYELVYVVKPNSDEEVREAILNKVKEVVATDGEIVKVDTWGTKKLAYPIAKFTEGFYVLVNFKSAVDV
PKEIDRNLKINENVIRHMIVVA
>gi|260688865|ref|YP_003219999.1| putative amino acid aminotransferase [Clostridium difficile R20291]
MAVKYAKRMQGLQGSEIRELLKLTQQPQIISFAGGMPAPELFPVEEMKKVSVAVLEENGRSAMQYTTTEG
YEPLREKIAARMNDKNKTNVNKDDILVTSGSQQGLDFAGKVFIDEGDVILCESPSYIGAINAFKSYQPKF
IDVPTDSDGMIMEELEKILETTDRIKMIYVIPDFQNPTGRTWPLERRKKFMEIVNKFEIPVIEDNPYGDL
RFEGETLPSLKSMDTKGLVIFLGTFSKIFCPGYRLGWTCASPEILSKFNFAKQGADLQASTISQMEVSKF
MDMYDLDAHVDKIKAVYVKRRDVMLKTMEEEFPEGLVFTHPEGGLFTWVELPSNLNAKELMPKCLEKNVA
YVAGGGFFPNGGRENTFRLNYSNMPEEKIIEGIKNIAAVLKEAMGVEA
>gi|260688866|ref|YP_003220000.1| hypothetical protein CDR20291_3525 [Clostridium difficile R20291]
MPMDLKIGDIVELKKQHACGCKEFEIIRTGMDIKIKCTKCSRLIMLDRETLEKRVKKLIKK
>gi|260688867|ref|YP_003220001.1| hypothetical protein CDR20291_3526 [Clostridium difficile R20291]
MNQMYIVSFNSTHHAIRSEKLFGENSLKVMALPTPREITASCGISIKFSFEDMEKIKTILVENNVDIKGI
YCISKLENGSKEVEKLD
>gi|260688868|ref|YP_003220002.1| hypothetical protein CDR20291_3527 [Clostridium difficile R20291]
MNIFKEMNQTMSIKIDARGLACPKPVINTKRELDNLEEGVVVTIVDNETAKENILKLAKSLSCEANIVDE
KENFISIEIRKGKNILDKQNVVDNKESELDNTCIFISSDKMGLGNDELGKVLIKGFIYTLTESKPYPKYV
LLVNGGVKLSAENEETIENLKILENMGVEVLSCGTCLDYYNLKDKLQVGTVTNMYTIVETLKNASNTISI
>gi|260688869|ref|YP_003220003.1| putative transcriptional regulator [Clostridium difficile R20291]
MSSKGGNSMEILSLGEKIKKLRKEKNMTLKELAGDRITAAQISHIERDKSHTSYELLEYLGDKLDVSVEY
LLETKEMQSKKITDNLILQSEIYIKENELNKAEDQIKEVLDICKRYDLMENYGRCNFLMANINLKKSNYN
DAIENFEKALYFFIKNSDSENILKCYLNIGKIYMQEDFYKGAISHFNFAEEILSENKFEDVNIHKELYSK
MAYCYIKLDNPNMSLKYIEKINEIDNRNDRKEDVDILVLKANNMLEIGKYEESRDYFKKALKILESEDNK
TGLANVYLTICDVYRKIGETDRVLEYSQKVYDIKKNDEDEYMMSGLFKIIEAYIDKEDYDLARKYCKIAL
ASSIKNKNKFNEYKALRFYANMYKNQNEVTLAIEYLIKCIKIVSDLGNNRILANLYIDLGQLYSNISKEK
ELEYYQKGVFMYKNLEIM
>gi|260688870|ref|YP_003220004.1| hypothetical protein CDR20291_3529 [Clostridium difficile R20291]
MKNKKIMLVLSILSISIFAVGCTNAQNGSDTSKKETKSNTNVEQPKEENNTEKEVPNNKAKPTPKEETKT
QSATIYSFDVDKTDLIENKVDLNKIDENTLFEELQKLKVVPESAKLNSFTTKDIDGVKTGILDVSSDFTK
SNLGSDAETLMLDSVARTYIKNMNVEQIKITVDGSNYESGHIVLEEGDYLK
>gi|260688871|ref|YP_003220005.1| putative selenocysteine lyase [Clostridium difficile R20291]
MIYLDNAATTYPKPERVYNAVLDCMKNYCANPGRAGHKLAMRAAREIYDTRENIAKLFNVSNPMNIVFTS
NATDSLNLAIKGVLQEGDHVITTSMEHNSVIRPIKALEKRGIENTVVKCDYEGFLDYEDLEKSIKSNTKL
IVTTHASNVCGTLIDIKKVGEIAKKHNILFLVDASQTAGVYDIDVNECNIDMLAMPGHKCLFGPQGTGIL
YVREGLNLNILKEGGTGSKSEEIVQPELFPDKYESGTHNTPGIAGLNQGILFIFERGINNIRQHEEELCQ
YMIDKLEEVSDIKIYGPKDSKKRASVIALNIGDMDSGEVTFLLDSDYNIATRSGIHCSPLAHTTLGTLKQ
GAVRFSIGYFNTKDEIDKAVEALKKISKNK
>gi|260688872|ref|YP_003220006.1| stage 0 sporulation protein J [Clostridium difficile R20291]
MENKSKRSNRLGRGLSALIPEIKGETSEKEIVNIDIDKIYPNEVQPRKQFDEEKIKVLSDSIKNYGVLQP
IVVKMDENNKYMIIAGERRFRASKLANKNQIPAIIKDIDMKDIMEIALIENLQREDLNSIEEALAYKSLI
EHYNVTQEEISEAVGKSRPHITNTLRLLNLGQDVIEMIDSGRITAGHGKALLRIADKDLQLQIAKKIEEE
ELSVREVENIAKKISENKQEEPKKSKPKDVFILDVEDKLRNIFGTKVNISKGKKKGKIEIEYYNDDDLNS
IVSMLLE
>gi|260688873|ref|YP_003220007.1| sporulation initiation inhibitor [Clostridium difficile R20291]
MIYRHYLYLKNTYSTFKINLILKGGNIMGKVIAVFNQKGGVGKTTTNVNLSASLGTLGKKILVLDLDPQG
NTTSGYGINKNEVENTIYEIMLDGLHIKEAIISTEFENVDVVPSATELSGAEIELTSKTNREYILKNSIK
AVIDEYDYIFLDCPPSLGMLTINCLTAVDSVLIPIQCEYYALEGVSQLMETIKLVKSRLNADIEIQGVVL
SMFDGRANLSIQVVEEVKKYFKGSVYTTLIPRNVRLAEAPSHGKPVIYYDKRCRGSVAYLELAEEFIDLE
EEEW
>gi|260688874|ref|YP_003220008.1| putative stage 0 sporulation protein [Clostridium difficile R20291]
MEDKRVMEIPIEDVVPNPYQPRKIFSQVSLEELSNSIKVYGIIQPITVRAKDGKYELIAGERRLRAAKLA
ELKTIPAIINNMNDESSAVLALLENLQREDLNFIEEAIGYENLIKEHAFTQQQLAEKLGKNQSTVANKLR
ILKLPNDIKMKLIENNLTERHARAFLKLPSEDLMQSVLDKVIKNELTVKKTEKLIQDVLEETKVQEEPDK
KQNIKGAMSIRIYINTIKQAFDAISNTGIDAKYNEIDKGDYMEVVVKIPKK
>gi|260688875|ref|YP_003220009.1| methyltransferase (putative glucose inhibited division protein B) [Clostridium difficile R20291]
MAKVNNIELLKNGIEGFNIDTNDSMLEKFKIYREILVEWNKKMNLTGIEDEKEVYIKHFLDSISAVKNGY
IKNGMSIIDVGTGAGFPGIPLKICLDSLELTLLDSLNKRINFLEEVSRVLELDNITFIHGRAEDFGKNED
YREKYDVATARAVAGLPILMEFCVPFVKVGGYFICLKGPNANLELEESQKAIDVLGLEYIEKIDVELPEV
DLNHNILVFKKVMETPVKYPRKAGRPAKNPIK
>gi|260688876|ref|YP_003220010.1| glucose inhibited division protein A [Clostridium difficile R20291]
MIKFEAGKYDVIVVGAGHAGCEAALATARMGYKTLIITMSLDSIALMPCNPSIGGTGKGQLVKEIDALGG
QMGLNIDKTYIQSRMLNTAKGPAVHSLRAQADKFKYHEEMKKTLEDEPNLDIAMDEVVEILHEGNVVIGV
GTKLGCSFKSKAVILATGVYLNSKIYMGEVAFYEGPNALGYAKYLTDSLVELGLRMRRFKTGTPARVHRD
SIDFSVMSLQEGDEKVTPFSFMNENIEKKQEPCYLTRTTEETQKVILDNLKRSAMYSGVIESTGPRYCPS
IEDKVVRFSDKTSHQLFIEPEGLNTKEMYIQGISTSLPFEVQLDMYKTIKGLENCKIMRPAYAIEYDCVD
PTQLKISLEIKGVENLFSAGQFNGTSGYEEAAAQGLMAGINAVRKIEGKEPFVLDRSEAYIGVLLDDLVT
KGTNEPYRMMTSRAEYRLYLRQDNADMRLTQKGYDIGLVKKDRYERFLNKKAAVDKEFERLKNERVTPKE
VNSLLEEKGATPIKVGISLYEFLKRPEVTYELLEELGKGAGEDVSREVKEQCVIITKYEGYIEKQLKQID
QFKKLENKKLDEKINYSSIEGLRLEARQKLDDIKPISIGQASRISGVSPADISVLLIYLEQVRRTRGGKG
E
>gi|260688877|ref|YP_003220011.1| putative tRNA modification GTPase [Clostridium difficile R20291]
MINLFIDDTIAAIATAPGEGGIGILRISGERALKVAEEIFKSMSGKSIEEYNKRTLIYGNILDNENIIDE
VLLAYMKGPNSYTGEDVIEINCHGGFISVKKILELILSKDVRLAEAGEFTKRAFLNGRIDLSQAEAVIDV
IKAKTDIAHEVAQNQLEGSLSKKIRELRDKVTEILAHVEVAIDYPEEDIEHITYQTLKEKTDELKKEIKK
LYDTAESGKILREGLKTVIVGKPNVGKSSLLNSILGENRAIVTDIPGTTRDVIEEFVNIKGIPLKIVDTA
GIRDTDDIVEKIGVEKSKESFTSADLIVMVLDASRKLSEEDIEILEKLKDKQTIVLLNKNDLKQEIEEEK
ILKYVENNSIIKISALQQEGIEELQDKIESMVYKGSIKNNSSLVVTNSRHKDALSKAYKSATDALIALEQ
SMPFDFVEVDLKNIWDYLGYINGDTVTEDLLDNIFHNFCIGK
>gi|260688878|ref|YP_003220012.1| SpoIIIJ-associated protein [Clostridium difficile R20291]
MNLKAEDIEVEILENPSKGFLGFIGAKDGTYEIFVIEREVDVAKNFIEVMLKNANVDAKVNVSQKDNLIM
VDIEGKEAASLIGRRGETLDSIQFLTGLALNKINKDSHTRVLVDIENYRSKREESLIRYANKVAREVAKT
RKTKKLDYMNPYERRIIHSALQNDKYVITYSEGTDPYRRLVIECKR
>gi|260688879|ref|YP_003220013.1| putative sporulation membrane protein [Clostridium difficile R20291]
MNIIGNFLGLILKVIFEFVNHYGISIILFTILVKIILLPLTIKQTKSTKAMQDIQPRIKEIQEKYKNKPE
KQNEEIVKLYGEAKINPLSGCLPLLIQFPILIGLFSVLREPVAHGVFANKAAFLAADNGFLWIKSLTSPD
YVLAVFSGASAYVMQKVMTPKDQLQGSMKVMTYVMAGMSFYWGFIFPAGLTLYWTVSNLFSIAQYYLIMN
PLKAKLAANSKEEKVNEKKPKINKK
>gi|260688880|ref|YP_003220014.1| hypothetical protein CDR20291_3539 [Clostridium difficile R20291]
MRFYQKYISPLKGPTCRFYPTCSQYSIEAFKKYGFVKGMYLTIRRLLKCHPFHPGGYDPLK
>gi|260688881|ref|YP_003220015.1| ribonuclease P protein component [Clostridium difficile R20291]
MDFNRTKGLKKDSDFRKVYKHGKSFANKYLVIYILKNKSDYSRVGISVSKKVGKAITRNRVRRLIKEAYR
LNIDEKIKPGYDIVFIARVSSKDATFKDIDKSIKNLVKRTDISI
>gi|260688882|ref|YP_003220016.1| 50S ribosomal protein L34 [Clostridium difficile R20291]
MSKRTYQPKKRQRSKEHGFRKRMKTSNGRNVLKRRRAKGRNRLTH