Definition Agrobacterium vitis S4 plasmid pAtS4e, complete sequence.
Accession NC_011981
Length 631,775

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The map label for this gene is 222102826

Identifier: 222102826

GI number: 222102826

Start: 498464

End: 499396

Strand: Reverse

Name: 222102826

Synonym: Avi_7551

Alternate gene names: NA

Gene position: 499396-498464 (Counterclockwise)

Preceding gene: 222102827

Following gene: 222102825

Centisome position: 79.05

GC content: 55.84

Gene sequence:

>933_bases
ATGGGTGACGGCCGCTTTGACCCAACTGACTGGGATAGCTTCACAACCAGGACTACGGCAGGCAAAACGCGGGACGCGGT
GTTTTCCAGTCGCAGCCTCCATGACAGCCTTAACCCTGCCAAGGCAAAGGGGCTTATGCGGGAATCGCGCGATGGCACAG
TTAACCCGTCGTCCAACCCGATCATCATTGGGCTGGATGTGACTGGCTCCATGGGGACGATTCCGGACTATATGGTTCGC
GATGGGCTTCCCGCGTTTTTTACCAGCATCTATGAGCGCAAGCCTGTATCCGATCCGCACGTCATGTTCATGGGAATTGG
GGACGTGGTATGTGATCGCGCTCCGCTACAGGTTTCGCAATTTGAAGCGGATATTCGCATTGCCGAACAGCTGAAGGATC
TCTTTCTGGAAGGCGGCGGCGGTGGTAACTCCAGCGAGTCTTATACTCTGCCGTGGTATTTCGCCGCCATGCACACATCA
ACTGATGCGTTTGAAAAGCGCGGGAAAAAGGGGTTTCTTTTCACTGTTGGCGATGAAGAAGTCCCTCCTCTGTTGAAGGC
TGAGGAAATCGAACGCGTGATGGGCGTTCGCCCCCAAATGGATTACACTGCCGAACAGCTTCTGGACCTTGTGAGCCGTC
GGTATCATGTGTTCCACGTCGTGGTTGAGCAGGGCTCTCACTTCCAGAGCTATCCCGACCGCGTCCGCAACAGTTGGCAG
TCCGTGCTGGGCCAGCATGTCCTCATGCTTTCCGACTATACGAAGCTCGCGGAAGTCGTTGTTTCCACGATCCAGATCGT
CGAAGGCGAGCATGCGGCAGATGTGGCTTCGAGTTGGAGCGGCGATACAGCTTTGGTCGTCCAGAAGGCGACGAAAGGTC
TTTCGCCTGCGACCAAAAGCGGAGGCCTGCGTTGGTTCGGCGGTAAGAAATGA

Upstream 100 bases:

>100_bases
TACAGAGCTTGGATCAAGGCTCTTGAAGACAGCTTCGGTGCTCGTCGCTTCACCGAACTGTCCGTTAACGCAAGCGATGT
TTATGGAAAGGATGCCCACA

Downstream 100 bases:

>100_bases
GCACCGCTTATGCAGTTCTCGGCGCTGGTTGGGGCGATGAGGGCAAGGGCTTGATGACTGATGCCCTGGCCAGCGCTGGA
AGCGTTGTCGTGCGGGCCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 309

Protein sequence:

>310_residues
MGDGRFDPTDWDSFTTRTTAGKTRDAVFSSRSLHDSLNPAKAKGLMRESRDGTVNPSSNPIIIGLDVTGSMGTIPDYMVR
DGLPAFFTSIYERKPVSDPHVMFMGIGDVVCDRAPLQVSQFEADIRIAEQLKDLFLEGGGGGNSSESYTLPWYFAAMHTS
TDAFEKRGKKGFLFTVGDEEVPPLLKAEEIERVMGVRPQMDYTAEQLLDLVSRRYHVFHVVVEQGSHFQSYPDRVRNSWQ
SVLGQHVLMLSDYTKLAEVVVSTIQIVEGEHAADVASSWSGDTALVVQKATKGLSPATKSGGLRWFGGKK

Sequences:

>Translated_310_residues
MGDGRFDPTDWDSFTTRTTAGKTRDAVFSSRSLHDSLNPAKAKGLMRESRDGTVNPSSNPIIIGLDVTGSMGTIPDYMVR
DGLPAFFTSIYERKPVSDPHVMFMGIGDVVCDRAPLQVSQFEADIRIAEQLKDLFLEGGGGGNSSESYTLPWYFAAMHTS
TDAFEKRGKKGFLFTVGDEEVPPLLKAEEIERVMGVRPQMDYTAEQLLDLVSRRYHVFHVVVEQGSHFQSYPDRVRNSWQ
SVLGQHVLMLSDYTKLAEVVVSTIQIVEGEHAADVASSWSGDTALVVQKATKGLSPATKSGGLRWFGGKK
>Mature_309_residues
GDGRFDPTDWDSFTTRTTAGKTRDAVFSSRSLHDSLNPAKAKGLMRESRDGTVNPSSNPIIIGLDVTGSMGTIPDYMVRD
GLPAFFTSIYERKPVSDPHVMFMGIGDVVCDRAPLQVSQFEADIRIAEQLKDLFLEGGGGGNSSESYTLPWYFAAMHTST
DAFEKRGKKGFLFTVGDEEVPPLLKAEEIERVMGVRPQMDYTAEQLLDLVSRRYHVFHVVVEQGSHFQSYPDRVRNSWQS
VLGQHVLMLSDYTKLAEVVVSTIQIVEGEHAADVASSWSGDTALVVQKATKGLSPATKSGGLRWFGGKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34147; Mature: 34016

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDGRFDPTDWDSFTTRTTAGKTRDAVFSSRSLHDSLNPAKAKGLMRESRDGTVNPSSNP
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCC
IIIGLDVTGSMGTIPDYMVRDGLPAFFTSIYERKPVSDPHVMFMGIGDVVCDRAPLQVSQ
EEEEEECCCCCCCCCHHHHHCCCHHHHHHHHHCCCCCCCCEEEEECHHHHHCCCCCCHHH
FEADIRIAEQLKDLFLEGGGGGNSSESYTLPWYFAAMHTSTDAFEKRGKKGFLFTVGDEE
HHHHHHHHHHHHHHHEECCCCCCCCCCEECCEEEEEHHCCHHHHHHCCCCCEEEEECCCC
VPPLLKAEEIERVMGVRPQMDYTAEQLLDLVSRRYHVFHVVVEQGSHFQSYPDRVRNSWQ
CCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHH
SVLGQHVLMLSDYTKLAEVVVSTIQIVEGEHAADVASSWSGDTALVVQKATKGLSPATKS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEEHHHCCCCCCCCC
GGLRWFGGKK
CCEEECCCCC
>Mature Secondary Structure 
GDGRFDPTDWDSFTTRTTAGKTRDAVFSSRSLHDSLNPAKAKGLMRESRDGTVNPSSNP
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCC
IIIGLDVTGSMGTIPDYMVRDGLPAFFTSIYERKPVSDPHVMFMGIGDVVCDRAPLQVSQ
EEEEEECCCCCCCCCHHHHHCCCHHHHHHHHHCCCCCCCCEEEEECHHHHHCCCCCCHHH
FEADIRIAEQLKDLFLEGGGGGNSSESYTLPWYFAAMHTSTDAFEKRGKKGFLFTVGDEE
HHHHHHHHHHHHHHHEECCCCCCCCCCEECCEEEEEHHCCHHHHHHCCCCCEEEEECCCC
VPPLLKAEEIERVMGVRPQMDYTAEQLLDLVSRRYHVFHVVVEQGSHFQSYPDRVRNSWQ
CCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHH
SVLGQHVLMLSDYTKLAEVVVSTIQIVEGEHAADVASSWSGDTALVVQKATKGLSPATKS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEEHHHCCCCCCCCC
GGLRWFGGKK
CCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA