>gi|218534478|ref|YP_002401008.1| putative site-specific recombinase [Escherichia coli S88]
MNNVIPLQNSPERVSLLPIAPGVDFATALSLRRMATSTGATPAYLLAPEVSALLFYMPDQRHHMLFATLW
NTGMRIGEARMLTPESFDLNGVRPFVRILSEKVRARRGRPPKDEVRLVPLTDISYVRQMESWMITTRPRR
REPLWAVTDETMRNWLKQAVRRAEADGVHFSIPVTPHTFRHSYIMHMLYHRQPRKVIQALAGHRDPRSME
VYTRVFALDMAATLAVPFTGDGRDAAEILRTLPPLR
>gi|218534479|ref|YP_002401009.1| RepFIB replication protein RepA [Escherichia coli S88]
MDKSSGELVTLTPNNNNTVQPVALMRLGVFVPTLKSLKNSKKNTLSRTDATEELTRLSLARAEGFDKVEI
TGPRLDMDNDFKTWVGIIHSFARHNVIGDKVELPFVEFAKLCGIPSSQSSRRLRERISPSLKRIAGTVIS
FSRTDEKHTREYITHLVQSAYYDTERDIVQLQADPRLFELYQFDRKVLLQLKAINALKRRESAQALYTFI
ESLPRDPAPISLARLRARLNLKSPVFSQNQTVRRAMEQLREIGYLDYTEIQRGRTKFFCIHYRRPRLKAP
NDESKENPLQPSPAEKVSPEMAEKLALLEKLGITLDDLEKLFKSR
>gi|218534480|ref|YP_002401010.1| hypothetical protein pECS88_0003 [Escherichia coli S88]
MLGGADNPNGELPSYITGADTCSLYTQSLALKHTYEVYFGYDRTLRKYGRFRQKLPVKTDIRKNSARRRP
VTGRSPRTGEEAQCICSYREQVRPEALS
>gi|218534481|ref|YP_002401011.1| hypothetical protein pECS88_0004 [Escherichia coli S88]
MAGLSGWRFRVFEVASDRPFRATNLSRNIDNVRALLAHLLYHVKVLSAQHVDVLSGVRTLRKQHVGWSGQ
SKW
>gi|218534483|ref|YP_002401013.1| conserved hypothetical protein, putative fragment of ImpB UV protection protein [Escherichia coli S88]
MYGHPPEPCYSNAAVEKLSLPTQDSRDIIAAACRALNHVWREGYRYMKAGVMLADFTPSGIAQPGLFDEI
QPRKNSEKLMKTLDELNQSGKGKVWFAGRGTAPEWQMKREMLSQCYTTKWRDIPLARLG
>gi|218534484|ref|YP_002401014.1| transposase InsB (ORF2) IS1 [Escherichia coli S88]
MPGNCPHYGRWPQHDFTSLKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYVGAKSRQRWLFYAYDSLRKTV
VAHVFGERTMATLGRLMSLLSPFDVVIWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLG
RKSLSFSKSVELHDKVIGHYLNIKHYQ
>gi|218534485|ref|YP_002401015.1| transposase InsA (ORF1) IS1 [Escherichia coli S88]
MRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQPGTHQKIIDMAMNGVGCRVTARIMGVGLNTILRHLKNS
GRSR
>gi|218534486|ref|YP_002401016.1| Ferric aerobactin receptor precusor IutA [Escherichia coli S88]
MMISKKYTLWALNPLLLTMMAPAVAQQTDDETFVVSANRSNRTVAEMAQTTWVIENAELEQQIQGGKELK
DALAQLIPGLDVSSRSRTNYGMNVRGRPLVVLVDGVRLNSSRTDSRQLDSIDPFNIDHIEVISGATSLYG
GGSTGGLINIVTKKGQPETMMEFEAGTKSGFSSSKDHDERIAGAVSGGNEHISGRLSVAYQKFGGWFDGN
GDATLLDNTQTGLQYSDRLDIMGTGTLNIDESRQLQLITQYYKSQGDDDYGLNLGKGFSAIRGTSTPFVS
NGLNSDRIPGTERHLISLQYSDSAFLGQELVGQVYYRDESLRFYPFPTVNANKQVTAFSSSQQDTDQYGM
KLTLNSKPMDGWQITWGLDADHERFTSNQMFFDLAQASASGGLNNKKIYTTGRYPSYDITNLAAFLQSGY
DINNLFTLNGGVRYQYTENKIDDFIGYAQQRQIAAGKATSADAIPGGSVDYDNFLFNAGLLMHITERQQA
WLNFSQGVELPDPGKYYGRGIYGAAVNGHLPLTKSVNVSDSKLEGVKVDSYELGWRFTGNNLRTQIAAYY
SISDKSVVANKDLTISVVDDKRRIYGVEGAVDYLIPDTDWSTGVNFNVLKTESKVNGTWQKYDVKTASPS
KATAYIGWAPDPWSLRVQSTTSFDVSDAQGYKVDGYTTADLLGSYQLPVGTLSFSIENLFDRDYTTVWGQ
RAPLYYSPGYGPASLYDYKGRGRTFGLNYSVLF
>gi|218534487|ref|YP_002401017.1| L-lysine 6-monooxigenase IucD [Escherichia coli S88]
MKKSVDFIGVGTGPFNLSIAALSHQIEELDCLFFDEHPHFSWHPGMLVPDCHMQTVFLKDLVSAVAPTNP
YSFVNYLVKHKKFYRFLTSRLRTVSREEFSDYLRWAAEDMNNLYFSHTVENIDFDKKRRLFLVQTSQGEY
FARNICLGTGKQPYLPPCVKHMTQSCFHASEMNLRRPDLSGKRITVVGGGQSGADLFLNALRGEWGEAAE
INWVSRRNNFNALDEAAFADEYFTPEYISGFSGLEEDIRHQLLDEQKMTSDGITADSLLTIYRELYHRFE
VLRKPRNIRLLPSRSVTTLESSGPGWKLLMEHHLDQGRESLESDVVIFATGYRSALPQILPSLMPLITMH
DKNTFKVRDDFTLEWSGPKENNIFVVNASMQTHGIAEPQLSLMAWRSARILNRVMGRDLFDLSMPPALIQ
WRSGT
>gi|218534488|ref|YP_002401018.1| Aerobactin siderophore biosynthesis protein IucC [Escherichia coli S88]
MNHKDWDLVNRRLVAKMLSELEYEQVFHAESQGDDRYCINLPGAQWRFIAERGIWGWLWIDAQTLRCADE
PVLAQTLLMQLKQVLSMSDATVAEHMQDLYATLLGDLQLLKARRGLSASDLINLNADRLQCLLSGHPKFV
FNKGRRGWGKEALERYAPEYANTFRLHWLAVKREHMIWRCDNEMDIHQLLTAAMDPQEFARFSQVWQENG
LDHNWLPLPVHPWQWQQKIATDFIADFAEGRMVSLGEFGDQWLAQQSLRTLTNASRRGGLDIKLPLTIYN
TSCYRGIPGRYIAAGPLASRWLQQVFATDATLVQSGAVILGEPAAGYVSHEGYAALARAPYRYQEMLGVI
WRENPCRWLKPDESPVLMATLMECDENNQPLAGAYIDRSGLDAETWLTQLFRVVVVPLYHLLCRYGVALI
AHGQNITLAMKEGVPQRVLLKDFQGDMRLVKEEFPEMDSLPQEVRDVTSRLSADYLIHDLQTGHFVTVLR
FISPLMVRLGVPERRFYQLLAAVLSDYMKKHPQMSERFALFSLFRPQIIRVVLNPVKLTWPDLDGGSRML
PNYLEDLQNPLWLVTQEYES
>gi|218534489|ref|YP_002401019.1| N(6)-hydroxylysine acetylase IucB [Escherichia coli S88]
MSGANIVHSGYGLRCEKLDKPLNLGWGLDNSAVLHWPGELPTGWLCDALDQIFIAAPQLSAVVLPWSEWC
EEPQALTLFGQVQSDIIHRSAFWQLPLWLSSPANRASGEMVFDAEREIYFPQRPPRPQGEVYRRYDPRIR
RMLSFRIADPVSDAERFTRWMNDPRVEYFWEQSGSLEVQIAYLERQLTSKHAFPLIGCFDDRPFSYFEIY
WAAEDRIGRHYSWQPFDRGLHLLVGEQQWRGAHYVQSWLRGVTHYLLLNEPRTQRTVLEPRIDNQRLFRH
LEPAGYRTIKEFDFPHKRSRMVMADRHHFFTEVGL
>gi|218534490|ref|YP_002401020.1| Aerobactin siderophore biosynthesis protein IucA [Escherichia coli S88]
MIMRIIIDIIVIILLCRSCLIMILPSEKSATDVAAQCFLNALIRETKDWQLAEYPPDELIIPLDEQKSLH
FRVAYFSPTQHHRFAFPAHLVTASGSYPVDFTTLSRLIIDKLRHQLFLPVPLCETFHQRVLESYAHTQQT
IDARHDWAILREKALNFGEAEQALLTGHAFHPAPKSHEPFNRQEAERYLPDMAPHFPLRWFSVDKTQIAG
ESLHLNLQQRLTRFAAENAPQLLNELSDNQWLFPLHPWQGEYLLQQVWCQALFAKGLIRDLGEAGTSWLP
TTSSRSLYCATSRDMIKFSLSVRLTNSVRTLSVKEVERGMRLARLAQTDGWQMLQARFPTFRVMQEDGWA
GLRDLNGNIMQESLFSLRENLLLEQPQSQTNVLVSLTQAAPDGGDSLLVSAVKRLSDRLGITVQQAAHAW
VDAYCQQVLKPLFTAEADYGLVLLAHQQNILVQMLGDLPVGFIYRDCQGSAFMPHATEWLDTIDEAQAEN
IFTREQLLRYFPYYLLVNSTFAVTAALGAAGLDSEANLMARVRTLLAEVRDQVTHKTCLNYVLESPYWNV
KGNFFCYLNDHNENTIVDPSVIYFDFANPLQAQEV
>gi|218534491|ref|YP_002401021.1| putative membrane transport protein ShiF [Escherichia coli S88]
MSSKIEDTPQKTLSCWPLAFSAGLLGIGQNGLLVVLPVLVIQTNLSLSVWAALLMLGSMLFLPSSPWWGK
QISLTGSKTVVLWALGGYGVSFTLLGLGSVLMATGAVTTAVGLGILIIARIVYGLTVSAMVPACQVWALQ
RAGEGNRMAALATISSGLSCGRLFGPLCAAAMLVIHPLAPVWMLMAAPVWAVVMLLRLPGTPPQPTPERK
SVSLKRDCLPYLLCAMLLAAAMSMMQLGLSPALTRQFDTDTTTISQQVAWLLGLSAIAALIAQFVVLRPQ
RLTPVALLLSAGVLMSSGLAIMLTEQLWLFYLGCAVLSFGAALATPAYQLLLNDKLADGAGAGWLAASHT
LGYGLCALLVPLASKTGVSIALIVTALFAAVLFTIVSACIWHYRTIK
>gi|218534492|ref|YP_002401022.1| putative membrane protein; CrcB-like protein [Escherichia coli S88]
MIKSLFAVIIGGSVGCTLRWLLSTRFNSLFPNLPPGTLVVNLLAGLIIGTALAYFLRQPHLDPFWKLMIT
TGLCGGLSTFSTFSVEVFALLQAGNYIWALTSVLVHVIGSLIMTALGFFIITILFA
>gi|218534493|ref|YP_002401023.1| hypothetical protein pECS88_0016 [Escherichia coli S88]
MTLLCQSPRLTRRGYSGGMMKAHVFVISMLTGIVVTYAVLLLGCLFIDKTLPTVDVVILSLVVGASAQQL
SRVLMSINRTFPYLACSQRI
>gi|218534494|ref|YP_002401024.1| putative enolase [Escherichia coli S88]
MIFLPLTVAEDDWAGWKILHGALGEQIELVGDDLFVTNVKYIQRGIDENLANSALIKLNQIGSLSETFDA
VQLCHDNNWGTFISHRSGETVDSFIADMTVAMRAGHLKTGAPCRGERIEKYNQLMRIEDELGSSAQFAGK
SAFK
>gi|218534495|ref|YP_002401025.1| SitD protein, Iron transport protein, inner membrane component [Escherichia coli S88]
MMALLLEPLQFTFMSHALLISLVVSIPCALLSVFLVLKSWALMGDAMSHAVFPGIVLAWILGLPLATGAF
VAGVFCAVATGYLKDNSRIKQDTVMGIVFSGMFAAGLILYIAVKPDVHLDHILFGDMLGITIGDIIQTVI
IAGLVTLVISVKWRDFLLFSFDYQQAQASGLHTRWLHYGLLCMVSLTIVATLKAVGIILSISLLIAPGAI
AVLLTQRFHIALLLATGISILVSMTGVWLSFFIDSAPAPTIVVLFAVMFIMTFTVTSINARTKENAEPRD
LLSSD
>gi|218534496|ref|YP_002401026.1| SitC protein, iron transport protein, inner membrane component [Escherichia coli S88]
MNALLEPFSYEYMLNAMWVSAMVGGLCAFLSCYLMLKGWSLIGDALSHSIVPGVAGAYMLGLPFSLGAFF
SGGLAAGSMLFLNQLTRLKEDAIIGLIFSSFFGLGLFMVSLNPTSVNIQTIVLGNILAIDPADILQLTII
GILSIIVLFFKWKDLMVTFFDENHARAIGLHPGRLKILFFTLLSVSTVAALQTVGAFLVICLVVTPGATA
WLLTDRFPRLLMIAVTIGSVTSFLGAWASYFLDGATGGIIVVAQTLLFLLAFVFAPTHGLLANRRRAHKA
LEDRS
>gi|218534497|ref|YP_002401027.1| SitB protein, iron transport protein, ATP-binding component [Escherichia coli S88]
MMQSAGIVVNDVTVTWRNGHTALRDASFTVPGGSIAALVGVNGSGKSTLFKAIMGFVRLTSGKISVLGIP
TRQALQKNLVAYVPQSEEVDWSFPVLVEDVVMMGRYGHMGMLRIAKKRDRQIVTDALERVDMVDFRHRQI
GELSGGQKKRVFLARAIAQQGDVILLDEPFTGVDVKTEAKIISLLRELRAEGKTMLVSTHNLGSVTTFCD
YTVMVKGTVLASGPTDTTFTAENLELAFSGVLRHVTLNGSEESIITDDERPFVAHRPSAVQREER
>gi|218534498|ref|YP_002401028.1| SitA protein, iron transport protein, periplasmic-binding protein [Escherichia coli S88]
MLSIKKVTMLLGCLVLTCSIAFQASAAEKFKVITTFTIIADMAKNVAGDAAEVSSITKPGAEIHEYQPTP
GDIKRAQGAQLILANGMNLELWFQRFYQHLNGVPEVIVSSGVTPVGITEGPYEGKPNPHAWMSPDNALIY
VDNIRDAFIKYDPANAQTYQRNADTYKAKITQTLAPLRKQIAELPENQRWMVTSEGAFSYLARDLGLKEL
YLWPINADQQGTPQQVRKVVDIVKKNHIPAVFSESTISDKPARQVARETGAHYGGVLYVDSLSTENGPVP
TYIDLLKVTTSTLVQGIKAGKREK
>gi|218534499|ref|YP_002401029.1| hypothetical protein pECS88_0023 [Escherichia coli S88]
MAASPIPSFSDCPWVFHALLRPRELANNLHYFCFAITNRPEQVHFKAKALPNFYPQYHIVSRK
>gi|218534500|ref|YP_002401030.1| IS1 repressor protein InsA [Escherichia coli S88]
MASVSISCPSCSATDGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQPGTHQKIIDMAMNGVGCRVTA
RIMGVGLNTILRHLKNSGRSR
>gi|218534501|ref|YP_002401031.1| hypothetical protein pECS88_0026 [Escherichia coli S88]
MDCAMTKKTLAERFEVLEQEYNSVMSTKYMGTSAFSHRSQEYIDSAKGNNWIARAKKLLEDSYGKESDYY
KDFNDTQRIAWSSNYQGLVRHYKPIFDAARDDLTYSGTASTIATKHAELDLIINILNKFPAFCRQLKQRY
NDRTPLEINDEYDVQDLVHALLLLHFNDVRPEENSPSFAGSSSRQDFLLKKEKIVIEVKKTRRSLGANKI
GEELLIDMARYRAR
>gi|218534502|ref|YP_002401032.1| hypothetical protein; putative exported protein [Escherichia coli S88]
MNVKNMFYGAILVSAVWAVILLSWFESSLTLSDYLRYESVILIPCLLWVAVYGLGKRYLQRTSN
>gi|218534503|ref|YP_002401033.1| hypothetical protein pECS88_0028 [Escherichia coli S88]
MATEWVDVADNAVKIGLGSLLTILGGWLTLKLTQKHELKKEAAVQGLKDKEIKTKRYVEFLALSQSLMQK
YLYEQCEANNDDYLAYLRIHNEITITSGLAIRKAAFKLQFDVSTFIFYNKIHDTELINALRDKARNSVSM
FQAIVNEEICNGKFGTASQ
>gi|218534504|ref|YP_002401034.1| hypothetical protein pECS88_0029 [Escherichia coli S88]
MVKFPGEVMSSSAAVTVITGVLVFVGGQLIVKSAIEPYIEFKKQLGKISNLLLANQAKLANPCAVEMSEI
IHELKDAAAQLMSKHSALPFYIKKFHIGFRFVPSTPEIISSAQKLNLIASIHEGKSKESTYEHIAEIGRM
LKIPTTYSL
>gi|218534505|ref|YP_002401035.1| hypothetical protein pECS88_0030 [Escherichia coli S88]
MKKFYQFRDEQRKELEQHDFYSLISSDCIALKDKLLFAPVMAHFIMNFRDMNKWVIRFDNNDNEYKSVIN
GGTIEDETHSRLFLEDWRKLYIDDKLNWKASDVIYWLFISREMECFRKFGIDFMRLCVDDGGDPILRYSH
SESGETCGNIFFSRISPIADQVANHLGISLRYFGTFHLNLENGHVWKSEGVFENIELSPDSYKKMATLSK
RMFDIFEGIHDSFYNYLSSYVLNGSHPSFFESLPVGKNVAPIYPEFVIENKSHNDGRHIEHINNYLEKIS
SHEFFKWLVNTSIDPQLKLKSFIPLWIVDIMGYRDINKYVFTYEQPESESEKIINDYALHLSEHSRLFYH
DWKSLQLDDMLRWSASDTLEFIFLNSDMDMHRENIVKFSLFGLKHRDPVIRFWFMMILELSGKEFFSHVG
DIALQVESKYNIYLPYLCGRHATENEHEAYNNMYEHFMVKELSPEQSDLIIQITDMVMRSLLNNLDISYR
YVVNNLLAAR
>gi|218534506|ref|YP_002401036.1| hypothetical protein pECS88_0031 [Escherichia coli S88]
MLLNLLKNVIYENAAVGIKQLASATGCIDRNKKTERESPSNEGEKKEVQSTRGVKNPTGEVGF
>gi|218534507|ref|YP_002401037.1| transposase InsA (ORF1) IS1 [Escherichia coli S88]
MRNDKSTTGHQRYLCSHCRKTWQLQFTYTASQPGTHQKIIDMAMNGVGCRATARIMGVGLNTILRHLKNS
GRSR
>gi|218534508|ref|YP_002401038.1| transposase [Escherichia coli S88]
MPGNCPHYGRWPQHDFTSLKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYVGAKSRQRWLFYAYDSLRKTV
VAHVFGERTMATLGRLMSLLSPFDVVIWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLG
RKSLSFSKSVELHDKVIGHYLNIKHYQ
>gi|218534509|ref|YP_002401039.1| plasmid-partitioning protein SopA [Escherichia coli S88]
MFRMRLMETLNQCINAGHEMTKAIAIAQFNDDSPEARKITRRWRIGEAADLVGVSSQAIRDAEKAGRLPH
PDMEIRGRVEQRVGYTIEQINHMRDVFGTRLRRAEDVFPPVIGVAAHKGGVYKTSVSVHLAQDLALKGLR
VLLVEGNDPQGTASMYHGWVPDLHIHAEDTLLPFYLGEKDDVTYAIKPTCWPGLDIIPSCLALHRIETEL
MGKFDEGKLPTDPHLMLRLAIETVAHDYDVIVIDSAPNLGIGTINVVCAADVLIVPTPAELFDYTSALQF
FDMLRDLLKNVDLKGFEPDVRILLTKYSNSNGSQSPWMEEQIRDAWGSMVLKNVVRETDEVGKGQIRMRT
VFEQAIDQRSSTGAWRNALSIWEPVCNEIFDRLIKPRWEIR
>gi|218534510|ref|YP_002401040.1| plasmid-partitioning protein [Escherichia coli S88]
MKRAPVIPKHTIKTQPLEDTPSSAPAAPMVDSLIARVGAMARGNAITLPVCGRDVKFTLEVLRGDSVEKT
SRVWSGNERDQELLTEDALDDLIPSFLLTGQQTPAFGRRVSGVIEIADGSRRRKAAALTESDYRVLVGEL
DDEQMAALSRLGNDYRPTSAYERGQRYASRLQNEFAGNISALADAENISRKIITRCINTAKLPKSVVALF
SHPGELSARSGDALQRAFTDKEELLKQQASNLHEQKKAGVIFEAEEVITLLTSVLKTSSASRTSLSSRHQ
FAPGATVLYKGDKMVLNLDRSRIPTECIERIEAILKELEKAAL
>gi|218534511|ref|YP_002401041.1| hypothetical protein pECS88_0039 [Escherichia coli S88]
MLRISSRASKKTPAEYSGQTSGGAVHPVYAAHHRPSHWPRYVPHTHWQALMES
>gi|218534512|ref|YP_002401042.1| hypothetical protein pECS88_0040 [Escherichia coli S88]
MMTMAGKIPAFFLPVPGQSTKEVAAGSALPGHAEHGLVGVQLCGRRVVCGLCRASILAGLALMQATVLMG
GGYLKKVRDNIMESPISSKKLTRFDTTLTGCFERDISRVGHRHFK
>gi|218534513|ref|YP_002401043.1| hypothetical protein pECS88_0041 [Escherichia coli S88]
MIMDEEKTRAEVAHIEFISYGTSRIFDRRMRSLDWKRKVVTFLGVFVPLMIGCAVLSFGLEAPFLPLCIT
IAGVASIMQLGFSLWSLVSGWDRSYSDCMASVKENTAIYNLAGSVRKKIGKLDEAKLEILIDDLTEKFER
REQEDLTLCVSDKELRYANRMSCFYFKKKCHICNVVPLTLKPGKCVCDGCGKF
>gi|218534514|ref|YP_002401044.1| conserved hypothetical protein, putative transposase IS110 family [Escherichia coli S88]
MSQPNLQCMGIDVAKLSLDIATTDTIEPFTVGNDEDGFAVITDKLKHTKINLILMEATGGLEAAIACKLQ
SEGYDVVVINPRQARDFARSMGYLAKTDKLDAAMLAQLALVIDRHPDRSRYIRHLPDEARAVLAAMVVRR
RQLNHMLVAERNRLYPSHPQSRKSIDNIIDALQNELDRINEQMKQHMTAFFQEQARLIGSVKGVGDITVA
SLIAELPEQGKLNRREISALTGVAPLNRDSGKMRGKRTTFGGRAGVRATLNMAALVATQFNPAIKLFYQR
LLAAGKPKKLALVACMRKLITILNTMLRKGEEWNASFQSQVIS
>gi|218534515|ref|YP_002401045.1| hypothetical protein pECS88_0043 [Escherichia coli S88]
MQRAQGKPQPDTHGWRELEGETAKSERVNDRKITADGKEGPGDRSGEAYPYILKMA
>gi|218534516|ref|YP_002401046.1| putative antirestriction protein [Escherichia coli S88]
MNNGGNPMQYAKPVTLNVEECDRLSFLPYLFGNDFLYAEAYVYALAQKMMPEYQGGFWHFIRLPDGGGYM
MPDGDRFHLVNGENWFDRTVSADAAGIILTSLVINRQLWLYHDSGNAGLTHLYRMRDAQLWSHIEFHPEC
NAIYAALD
>gi|218534517|ref|YP_002401047.1| hypothetical protein pECS88_0045 [Escherichia coli S88]
MPDSECVFAVVLTRGNVRHMAQDWNLSDDELETVMQRLDDAFVYGACDRVVSDIVNELMEEKRVNRLVTV
PAVLLEKVMVMAGSEIYRLHAVGSENGGDGDAFVREEREIMRVMRQALDGENG
>gi|218534518|ref|YP_002401048.1| hypothetical protein pECS88_0046 [Escherichia coli S88]
MNISTETREILRNYKTVINARRREMGQKPLTTAQIVDEICDFVTNQQAVFLGGHYILQGS
>gi|218534519|ref|YP_002401049.1| hypothetical protein pECS88_0047 [Escherichia coli S88]
MTLAAITMTAPEAASPVQMYRATYSPDDNKLRLYAASRLDPETYKKVHDAGFRWAPKQALFVAPAWTPGR
EDVLLSLAGEIEDEDSTLAERQEARAERFTGYSGKRASESAQALDEVERLAAMIPPGQPILVGHHSERRA
RRDAQRIENGMKRAVMLVERAEYWEERARSALLHAKYKERPDVRWRRIKKIEADLRKAEKTIAQSQKYLT
IWRAESLDLNMAKLISSHDRISACFPLDTYPRPAEKSQYEGSRSLWSALDDDIITTEQAREIAIRCHKRQ
IQHQQRWVNHYQNRLIYERAMLDESGGVVTRTQDFEPGGQVFSRGEWLTIIRVNKSNGTVSSVTTPNYSF
LGYSGTMKVTPDRITDYKAPSAEEAAVASQAAKRPPVVNYPGEGFREMTKAQWAALPRDCKAVRSVAEAE
DHGAYRYRRTMDNNFRLVNVYITDMKITEIPQK
>gi|218534520|ref|YP_002401050.1| putative adenine-specific DNA methylase [Escherichia coli S88]
MYSQLRERIRLMRARLDNAAPVAEIRAESQLFVTPAPVCDRLVTLAGISNRDHILEPSAGTGAILRAIRD
TAPVAMCDAVEINSGLVRYLRENFNGVRVQCGDFMEWQPVQYYSRVIMNPPFSHGQDIRHILRAFSLLRP
GGVLVAVCLNGPRQQEKLLPFSDVREELPRGTFAYTDVPTMIIRLRA
>gi|218534521|ref|YP_002401051.1| single-stranded DNA-binding protein [Escherichia coli S88]
MAVRGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTEWHRVVLFGKLAEVAGE
YLRKGAQVYIEGQLRTRSWEDNGITRYVTEILVKTTGTMQMLGRVAGAQTQPEEGQQFSGQSQPEPQAEA
GTKKGGAKTKGRGRKATQPESQPQPPESDDYGFSDDTRSERLTVTTAPSCAGHHRRDEDERIFQNTSGAA
>gi|218534522|ref|YP_002401052.1| hypothetical protein pECS88_0051 [Escherichia coli S88]
MRGITGEMRMSEYFRILQGLPDGPFTRKHAEAVAAQYRNVFIEDDHGEQFRLVVRNNGAMVWRTWNFEDG
AGYWMNHAIRDFGILK
>gi|218534523|ref|YP_002401053.1| putative transposase ORF1, IS21 family [Escherichia coli S88]
MPTVPISMRKLKEILRLKYGVGLSHRQIGRSLAISPSVVSRYANRAAQLGIKQWPLPTGWDDTKLKHAFL
QTQVKMKKHSLPDWATVHRELRNKCVTLQLLWEEYCERNPGGFYSYNHYCRMYREWLKTTSPSMRQVHKA
GEKLFVDYCGPTVGVTDPETGEIRTAQVIVAVLGASSYTWAEATWSQQLEDWVMSHVRCFQWLGGVPELV
VPDNLKSATSRACKYDPDVNPTYQQMLEHYNVAVLPARPRKPKDKAKAEVGVQVVERWIMARIRHEIFYS
LASLNQRIRELLERLNNKIMQKLGYSRAELFIQLDKPALKPLPEASYSYTLVKKVRVHADYHVEIDKHYY
SVPCSLLGQQLEAWISGELVRLFNQGQEVAVHPRKRTYGYSTRNEHMPEAHRQHATWTPERLLEWAGHIG
SETHSYVLHILNSRPHPEQSYRFCLGLLNLHKKYSKARLNAACARALKTKVWRLSGIKSILEKGLDKQPV
QDPKPDLLSTMEHENVRGSEYYH
>gi|218534524|ref|YP_002401054.1| Putative transposase ORF2, IS21 family [Escherichia coli S88]
MMNHLYEQLTALKLTGFRDALKKQLAQPGTYQELGFEERLSLLTAEELTCRENRKAERLIKHARFRLNAE
LSKLDYRNNRGLDRALIRSLSQGNWLTLKQNILLTGATGSGKTFLACALGHNACRQGYKVYYYRLKALME
QCYQGHADGRYSKLLTRLNNSDLLLLDDWGLEPLSSEQRSDLLEIVDLMYQRGSIIVVSQLPVENWYKMI
GDSTHADAILDRLVHGSIKIELKGESMRKIQSPLTEGDQ
>gi|218534525|ref|YP_002401055.1| putative DNA-binding protein involved in plasmid partitioning (ParB-like partition protein) [Escherichia coli S88]
MSVPLASLIKSPLNVRTVPYSAESVSELAESIKGVGLLQNLVVHTLPGDRYGVAAGGRRLAALNMLAERG
IIPADWPVRVKVIPQELATAASMTENGHRRDMHPAEQIAGFRAMAQEGKTPAQIGDLLGYSPRYVQRMLK
LADLAPVILDALAEDRITTEHCQALALENDTARQVQVFEAACQSGWGGKPDVRVIRNLITESEVAVAGNS
KFRFVGADAFSPDELRTDLFSDDGDGYVDRVALDAALLEKLQAVAEHLREAEGWEWCAGRMEPVGECRED
AGTYRCLPEPDAVLTEAEEERLNELMTRYDALENQCEESDLLEAEMKLMRCMAKVRAWTPEMRTGSGVVV
SWRYGNVCVQRGVQLRSEDDAADDADRTEQVQEKASVEEISLPLLTKMSSERTLAVQAALMQQPDKSLAL
LAWTLCLNVFGSGAYSKPAQISLECKHYSLTSDAPSGKEGAAFMAMMAEKARLAALLPEGWSRDMTTFLS
LSQEVLLSLLSFCTACSIHGVQTRECGHTSRSPLDTLESAIGFHMRDWWQPTKANFFGHLKKPQIIAALN
DAGLSGAARDAEKMKKGDAAEHAEHHMKDNRWVPGWMCAPHPQTDTTERTDNLADAA
>gi|218534526|ref|YP_002401056.1| plasmid SOS inhibition protein B [Escherichia coli S88]
MMKTELTLNVLQTMNAQEYEDIRAAGSDERRELTHAVMRELDAPDNWTMNGEYGSEFGGFFPVQVRFTPA
HERFHLALCSPGDVSQVWVLVLVNAGGEPFAVVQVQRRFAPEAVSHSLALAASLDAQGYSVNDIIHILMA
EGGQV
>gi|218534527|ref|YP_002401057.1| plasmid SOS inhibition protein A [Escherichia coli S88]
MNARSRALVPLSTEQQAAWRAVAETEKRRHQGNTLAEYPYAGAFFRCLNGSRRISLSDLRFFMPSLTAEE
LHGNRLQWLCAIDVLIETQGEVCLLPLPGDAAERLFPSVRFRVRERSRHKSALVMQKYSRQQAREAEQKA
RAYQVLVAQAEIELAFHSPETVGSWHARWSDRVAEHDLEPLFWQWGERFPSLAGMERWQWQDMPFWQVIA
EASLAAREAGHAVREMERWMVPNKLREAA
>gi|218534528|ref|YP_002401058.1| modulator of post-segregation killing protein [Escherichia coli S88]
MKVVCYRVVWQKAESPVVNFSLTHEAPCMSDQQQYGLLPCLMQGGVNHETTGKRPYLVRINRVLHVVNIH
TPDPESSVRSPAEGRIQGGYGKFGLRIQR
>gi|218534529|ref|YP_002401059.1| conserved hypothetical protein YubN [Escherichia coli S88]
MKRGLRNGVAPYIPAAFCRDAGSAGHGATEAARPERSLQARGFASGMEARQGGDSSAGSVHDSPPRQGDA
RKRHKQENNKTDNNQGSSNQSQNRRKKRIIKGKVM
>gi|218534530|ref|YP_002401060.1| hypothetical protein pECS88_0060 [Escherichia coli S88]
MSTRNIHVNIASYTLLVAGKKKYTGEEWDVLEFSSLTELKKYRKSHPEKMAFSYSYALSRGVDTQFRHIN
IAEADHFKQFLRQIKRTGLDIRAIC
>gi|218534531|ref|YP_002401061.1| hypothetical protein pECS88_0061 [Escherichia coli S88]
MLMEIGRDDIKRKNFLLNLFFHKGVAVMRLASRFGRYNSIRRERPLTDDELMQFVPSVFSGDKHESRSER
YTYIPTINIINKLRDEGFQPFFACQSRVRDLGRREYSKHMLRLRREGHINGQEVPEIILLNSHDGSSSYQ
MIPGIFRFVCTNGLVCGNNFGEIRVPHKGDIVGQVIEGAYEVLGVFDKVTDNMEAMKEIHLNSDEQHLFG
RAALMVRYEDENKTPVTPEQIITPRRREDKQNDLWTTWQRVQENMIKGGLSGRSASGKNTRTRAITGIDG
DIRINKALWMIAEQFREWKS
>gi|218534532|ref|YP_002401062.1| lytic transglycosylase [Escherichia coli S88]
MKKWMLAICLMFINEICLATDCFDLAGRDYKIDPDLLRAISWQESRYRVNAIGINPVTGYGSGLMQVDSQ
HFNELARYGIKPEHMTTDPCMNIYTGAYYLAIAFKKWGVTWEAVGAYNAGFRKTERQNQRRLAYASDVYR
IYTGIKSSKGIRVPTTKKSLSQMNSVQNN
>gi|218534533|ref|YP_002401063.1| conjugal transfer protein TraM [Escherichia coli S88]
MAKVNLYISNDAYEKINAIIEKRRQEGAREKDVSFSATASMLLELGLRVHEAQMERKESAFNQTEFNKLL
LECVVKTQSSVAKILGIESLSPHVSGNPKFEYANMVEDIREKVSSEMERFFPKNDDE
>gi|218534534|ref|YP_002401064.1| conjugal transfer transcriptional regulator TraJ [Escherichia coli S88]
MKLKIADAGRRELPASTVHRILCEEVPMYPMDRIQQKHARQIDLLENLTAVIQDYPNPACIRDETGKFIF
CNTLFHESFLTQDQSAEKWLLSQRDFCELISVTEMEAYRNEHTHLNLVEDVFIQNRFWTISVQSFLNGHR
NIILWQFYDAAHVRHKDSYNQKTIVSDDIRNIIRRMSDDSSVSSYVNDVFYLYSTGISHNAIARILNISI
STSKKHASLICDYFSVSNKDELIILLYNKKFIYYLYEKAMCIINTR
>gi|218534535|ref|YP_002401065.1| conjugal transfer protein TraY [Escherichia coli S88]
MLLKRFGTRSATGKMVKLKLPVDVESLLIEASNRSGRSRSFEAVIRLKDHLHRYPKFNRAGNIYGKSLVK
YLTMRLDDETNQLLIAAKNRSGWCKTDEAADRVIDHLIKFPDFYNSEIFREADKEEDITFNTL
>gi|218534536|ref|YP_002401066.1| conjugal transfer pilin subunit TraA [Escherichia coli S88]
MNAVLSVQGASAPVKKKSFFSKFTRLNMLRLARAVIPAAVLMMFFPQLAMAAGSSGQDLMASGNTTVKAT
FGKDSSVVKWVVLAEVLVGAVMYMMTKNVKFLAGFAIISVFIAVGMAVVGL
>gi|218534537|ref|YP_002401067.1| conjugal transfer pilus assembly protein TraL [Escherichia coli S88]
MSGDENKLKKYRFPETLTNQSRWFGLPLDELIPAAICIGWGITTSKYLFGIGAAVLVYFGIKKLKKGRGS
SWLRDLIYWYMPTALLRGIFHNVPDSCFRQWIK
>gi|218534538|ref|YP_002401068.1| conjugal transfer pilus assembly protein TraE [Escherichia coli S88]
MEHGARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGMNNYRLQNEQRTAVTPMAFNAPFAVSQNSADASYL
QQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIKNDNVNSAFFQTSVRVWPQYG
RVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWLDNFGETDDEKK
>gi|218534539|ref|YP_002401069.1| conjugal transfer protein TraK [Escherichia coli S88]
MRKNNTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIAVNSLDGALTN
NEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSDLRGTGEEAGAWETSTPYESL
LVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAVWTGNHLKMVRFAVENKTLSALNIRESDFWQ
PGTRAVMFSQPASQLLAGARMDVYVIRDGEGN
>gi|218534540|ref|YP_002401070.1| conjugal transfer pilus assembly protein TraB [Escherichia coli S88]
MASINTIVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTTFDDKVRQHA
TTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKALGANPVTATGEPVPQMPA
SPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPS
LPYIPSGSFAKAMLIEGADANASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAI
VRTRNISCLKDGKTIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLG
ATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEEMALERT
QSRAEEDNPESPVPVPPSAESHLNGFNTDQMLKQLGNLNPQQFMSGSQGGGNDGK
>gi|218534541|ref|YP_002401071.1| conjugal transfer protein TraP [Escherichia coli S88]
MANNMSSRQACHAARYVVARVLRGLFWCLKYTVILPLATMALMALFVLWKDNTTPGKLLVKEINFVRQTA
PAGQFPVSECWFSSSDSSGRSEIQGICHYRAADAADYVRETDRSLMQLVTALWATLALMYVSLAAITGKY
PVRPGKMKCIRVVTADEHLKEVYTEDASLPGKIRKCPVYLPDDRTNRNNGDKNEHA
>gi|218534542|ref|YP_002401072.1| conjugal transfer protein TrbD [Escherichia coli S88]
MTEQTETTEIKMNMRNINVITALSVPGKTVSDDFMHAVLSNCATRIVLPAPEKFGSESLPDNFNMTAVGV
MKNSEI
>gi|218534543|ref|YP_002401073.1| conjugal transfer protein TrbG [Escherichia coli S88]
MNKLVSDGSVKKINYPVLYESGITPPLCEVSAPEPDAGGKRIVAYVYKSSRSTVFENPDIVKTCTVRDLK
KDFVNCDEKGEGQ
>gi|218534544|ref|YP_002401074.1| conjugal transfer protein TraV [Escherichia coli S88]
MKQISFFIPLLGTLLLSGCAGTSTEFECNATTSDTCMTMEQANEKAKKLERSSEAKPVAASLPRLAEGNF
RTMPVQTVTATTPSGSRPAVTAHPEQKLLAPRPLFTAAREVKTVVPVSSVTPVTPPRPLRTGEQTAALWI
APYIDNQDVYHQPSSVFFVIKPSAWGKPRIN
>gi|218534545|ref|YP_002401075.1| conjugal transfer protein TraR [Escherichia coli S88]
MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVECQAYQERQRK
HYA
>gi|218534546|ref|YP_002401076.1| conjugal transfer ATP-binding protein TraC [Escherichia coli S88]
MNNPLEAVTQAVNSLVTALKLPDESAKANEVLGEMSFPQFSRLLPYRDYNQESGLFMNDTTMGFMLEAIP
INGANESIVEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAA
TQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVG
EMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRESGRNSTARILNFHLARNPEIAFL
WNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGE
LRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKG
LFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGA
GKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGETLRFNPFANITDIDQSAERVRDQLSV
MASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYT
ANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWR
LLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYN
QLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGL
SIHEAVWQLAWKKSGPEMASLEAWLEEHEKYRSVA
>gi|218534547|ref|YP_002401077.1| conjugal transfer protein TrbI [Escherichia coli S88]
MTTTQKTTDVTAPRRSHWWWTVPGCLAMVLLNAAISYGIVRLNAPVTAAFNMKQTVDAFFDSASQKQLSE
AQSKALSARFNTALEASLQAWQQKHHAVILVSPAVVQGAPDITREIQQDIARRMRAEP
>gi|218534548|ref|YP_002401078.1| conjugal transfer pilus assembly protein TraW [Escherichia coli S88]
MRCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRP
PAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQVAWMKR
QTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPARVSAVPGDRFLKVEFIPAEEGRK
>gi|218534549|ref|YP_002401079.1| conjugal transfer pilus assembly protein TraU [Escherichia coli S88]
MKRSLWLLMLFLLAGHVPAASADSACEGRFVNPITDICWSCIFPLSLGSIKVSQGKVPDTANPSMPIQIC
PAPPPLFRRIGLAIGYWEPMALTDVTRSPGCMVNLGFSLPAFGKTAQGTAKKDEKQVNGAFYHVHWYKYP
LTYWLNIITSLGCLEGGDLDIAYLSEIDPTWTDSSLTTILNPEAVIFANPIAQGACAADAIASAFNMPLD
VLFWCAGSQGSMYPFNGWVSNESSPLQSSLLVSERMAFKLHRQGMIMETIGKNNAVCNEYPSPILPKERW
RYQMVNMYPDSGQCHPFGRSVTRWETGKNPPNTKKNFGYLMWRKRNCVFL
>gi|218534550|ref|YP_002401080.1| conjugal transfer pilus assembly protein TrbC [Escherichia coli S88]
MMKLSMKSLAALLMMLNGAVMASENVNTPENRQFLKQQENLSRQLREKPDHQLKAWAEKQVLENPLQRSD
NHFLDELVRKQQASQDGKPRQGALYFVSFSIPEEGLKRMLGETRHYGIPATLRGMVNNDLKTTAEAVLSL
VKDGATDGVQIDPTLFSQYGIRSVPALVVFCSQGYDIIRGNLRVGQALEKVAATGDCRQVAHDLLAGKGV
SGK
>gi|218534551|ref|YP_002401081.1| conjugal transfer mating pair stabilization protein TraN [Escherichia coli S88]
MKRILPLILALVAGMAQADSNSDYRAGSDFAHQIKGQGSSSIQGFKPQESIPGYNANPDETKYYGGVTAG
GDGGLKNDGTTEWATGETGKTITESFMNKPKDILSPDAPFIQTGRDVVNRADSIVGNTGQQCSAQEISRS
EYTNYTCERDLQVEQYCTRTARMELQGSTTWETRTLEYEMSQLPAREVNGQYVVSITSPVTGEIVNAHYS
WSRTYLQKSVPMTITVLGTPLSWNAKYSADASFTPVQKTLTAGVAFTSSHPVRVGNTKFKRHTAMKLRLV
VRVKKASYTPYVVWSESCPFSKELGKLTKTECTEAGGNRTLVKDGQSYSMYQSCWAYRDTYVTQSADKGT
CQTYADNPACTLVSHQCTFYSEEGACLHEYATYSCESKTSGKVMVCGGDVFCLDGECDKAQSGKSNDFAE
AVSQLAALAAAGKDVAALNGVDVRAFTGQAKFCKKAAAGYSNCCKDSGWGQDIGLAKCSSDEKALAKAKS
NKLTVSVGEFCSKKVLGVCLEKKRSYCQFDSKLAQIVQQQGRNGQLRISFGSAKHPDCRGITVDELQKIQ
FDRLDFTNFYEDLMNNQKIPDSGVLTQKVKEQIADQLKQAGQ
>gi|218534552|ref|YP_002401082.1| conjugal transfer protein TrbE [Escherichia coli S88]
MMKVIFTSNRFIDFLIRLLITAIVISPVIIWSWDTVKETTAGEILAAAFVIFYSGVLLFILYFCFSALTD
LQKPDERKSDERNEDE
>gi|218534553|ref|YP_002401083.1| conjugal pilus assembly protein TraF [Escherichia coli S88]
MKEKVMKGMKMNKALLPLLLCCFIFPASGKDAGWQWYNEKINPKEKENKPVPAASRQEPDIMQKLAALQT
ATKRALYEAILYPGVDNFVKYFRLQNYWTQQAGLFTMSAKKAMLAHPELDYNLQYSHYNGTVRNQLAADQ
VQQRQAIAKLAEHYGIMFFYRGQDPIDGQLAQVINGFRDTYGLSVIPVSVDGVINPLLPDSRTDQGQAQR
LGVKYFPAMMLVDPKQGSVRPLSYGFISQDYLAKQFLNVSEDFKPNF
>gi|218534554|ref|YP_002401084.1| conjugal transfer pilin chaperone TraQ [Escherichia coli S88]
MISKRRFSLPRLDITGMWVFSLGVWFHIVARLVYSKPWMAFFLAELIAAILVLFGAYQVLDAWIARVSRE
EREALEARQQAMMEGQQEGRHVSH
>gi|218534555|ref|YP_002401085.1| conjugal transfer protein TrbB [Escherichia coli S88]
MSLIKSLLFTLLLAAAAVQASTRDEIERLWNPQGMAAQPAQPAAGTSARTEKPAPRWFRLSNGRQVNLAD
WKVVLFMQGHCPYCHQFDPVLKQLAQQYGFSVFPYTLDGQGDTAFPEALPVPPDVMQTFFPNIPVATPTT
FLVNVNTLEALPLLQGATDAAGFMARMDTVLQMYGGKKGAK
>gi|218534556|ref|YP_002401086.1| conjugal transfer protein TrbJ [Escherichia coli S88]
MLPVLWRGWIPFCRCTEGKKVRNKQVVLLIAGISGIATGIIVSLNIPFIHQGLFYPASPVEIVVSLCLTF
SVSVVFFVVAIVGWISVSEIYYSRRTGRKYRDIPAEMSYAPGEHIKGGQE
>gi|218534557|ref|YP_002401087.1| conjugal transfer pilus assembly protein TraH [Escherichia coli S88]
MMPRIKPLLVLCAALLTVTPAASADVNSDMNQFFNKLGFASNTTQPGVWQGQAAGYAYGGSLYARTQVKN
VQLISMTLPDINAGCGGIDAYLGSFSFINGEQLQRFVKQIMSNAAGYFFDLALQTTVPEIKTAKDFLQKM
ASDINSMNLSSCQAAQGIIGGLFPRTQVSQQKVCQDIAGESNIFADWAASRQGCTVGGKSDSVRDKASDK
DKERVTKNINIMWNALSKNRMFDGNKELKEFVMTLTGSLVFGPNGEITPLSARTTDRSIIRAMMEGGTAK
IYHCNDSDKCLKVVADTPVTISRDNALKSQITKLLASIQNKAVSDTPLDDKEKGFISSTTIPVFKYLVDP
QMLGVSNSMIYQLTDYIGYDILLQYIQELIQQARAMVATGNYDEAVIEHINDNMNDATRQIAAFQSQVQV
QQDALLVVDRQMSYMRQQLSARMLSRYQNNYHFGGSTL
>gi|218534558|ref|YP_002401088.1| conjugal transfer mating pair stabilization protein TraG [Escherichia coli S88]
MNEVYVIAGGEWLRNNLNAIAAFMGTRTWDSIEKIALTLSVLAVAVMWVQRHNVMDLLGWVAVFVLISLL
VNVRTSVQIIDNSDLVKVHRVDNVPVGLAMPLSLTTRIGHAMVASYEMIFTQPDSVTYSKTGMLFGAELV
SKSTDFLSRNPEIANLFQDYVQNCVMGDIYLNHKYTLEELMASADPYTLIFSRPSPLRGVYDSNNNFVTC
KDASVLLKDKLNLDTQSGGKTWHYYAQQLFGGRPDPNLLFSTLIGDSYSYFYGSSKSASQIIRQNVTINA
LKEGITSYAARNGDSASLVNLATTSSMEKQRLAHVSIGHVAMRTLPMTQTILTGIAIGIFPLLVLAAVFN
KLTLSVLKGYVFALMWLQSWPMLYAILNSAMTFYAKQNGAPVVLSEISQIQLKYSDLASTAGYLSMMIPP
LSWMMVRGLGAGFSSVYSHFASSAISPTASAAGSVVDGNYSYGNMQTENVNGFSWSTNSTTSFGQMMYQT
GSGATATQTRDGNMVMDASGAMSRLPVGINATRQIAAAQQEMAREASNRAESALHGFSSSIASAWNSLSQ
FGSNRGSSDSVTGGADSTMSAQDSMMASRMRSAVESYAKAHNISNEQATRELASRSTRGSAGMYGDAHAE
WGVKPKILGVGGGVGVRGGGRASIDWSDEDAHQASSGSRASHDTRHDIDARATQDFKEASDYFTSRKVSE
SGSHTDNNADSRVDQLSAALNSAKQSYDQYTTNMTRSHEYAEMASRTESMSGQMSEDLSQQFAQYVMKHA
PQDAEAILTNTSSPEIAERRRAMAWSFVQEQVQPGVDNAWRESRGDIGKGMESVPSGGGGQPGYYC
>gi|218534559|ref|YP_002401089.1| surface exclusion inner membrane protein TraS [Escherichia coli S88]
MYGEMIMKNLAHIALVTVIQFIACYLADWGSAETVFILCFIVLWQGLFIWLFSQIRKKRHVSDEFKFSKG
VWYILMPVSSLLSPLLSLMVFIIGTLYELRRISGCVSVREWMQSQVNEQTNEDLHLDFDDVNFDYVDFYR
TNPATGLAMHGGFDSAGNTFGTCWQDYDDRR
>gi|218534560|ref|YP_002401090.1| conjugal transfer surface exclusion protein TraT [Escherichia coli S88]
MEDLIQQEILLGLVGRTMMTGDKKTVVCNKGNLMKTKKLMTVALVSSTLALSGCGAMSTAIKKRNLEVKT
QMSETIWLEPASERTVFLQIKNTSDKDMSGLQGKIADAVKAKGYQVVTSPDKAYYWIQANVLKADKMDLR
ESQGWLNRGYEGAAVGAALGAGITGYNSSSAGATLGVGLAAGLVGMAADAMVEDVNYTMITDVQIAERTK
ATVTTDNVAALRQGTSGAKIQTSTETGNQHKYQTRVVSNANKVNLKFEEAKPVLEDQLAKSIANIL
>gi|218534561|ref|YP_002401091.1| conjugal transfer protein TraD [Escherichia coli S88]
MSFNAKDMTQGGQIASMRIRMFSQIANIMLYCLFIFFWILVGLVLWVKISWQTFVNGCIYWWCTTLEGMR
DLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCGEQLWSAFVLATVVALVICLITFFVVSWILGRQGKQ
QSENEVTGGRQLTENPKDVARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYAR
QRGDMVVIYDRSGEFVKSYYDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQG
SGRTIFAEAAYLMRNDPNRSYSKLVDTLLSIKIEKLRTFLRNSPAANLVEEKIEKTAISIRAVLTNYVKA
IRYLQGIEHNGESFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRV
WFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAATLFDVMNTRAFFRSPSHKIA
EFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSL
KYQARPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAI
NDKKSDSGVNVPAGGIEQELKMKPEEEMEQQLPPGSSESGEVVDMAAYEAWQQENHPDIQQQMQRREEVN
INVHRERGEDVEPGDDF
>gi|218534562|ref|YP_002401092.1| conjugal transfer nickase/helicase TraI [Escherichia coli S88]
MMSIAQVRSAGSAGNYYTDKDNYYVLGSMGERWAGRGAEQLGLQGSVDKDVFTRLLEGRLPDGADLSRMQ
DGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEALASTRVMTDGQSETVLTGNLV
MALFNHDTSRDQEPQLHTHAVVANVTQHNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEA
LGYETEVVGKHGMWEMPGVPVEAFSGRSQAIREAVGEDASLKSRDVAALDTRKSKQHVDPEVRMAEWMQT
LKETGFDIRAYRDAADQRAETRTQAPGAVSQEGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPE
NGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVPRTAGYS
DAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNLKQDERLSGELITGR
RQLLEGMAFTPGNTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTGTGSALMAMKDAGVNTYRW
QGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQVILTQAIRSELKTQGVLGHPEVT
MTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDS
SWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPASLPVADSPFTALKL
ESGWVETPGHSVSDSAKVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQI
KARAGETLLETAISLQKAGLHTPAQQAIHLALPVLESKNLAFSMVDLLTEAKSFAAEGTSFTDLGGEINA
QIKRGDLLYVDVAKGYGTGLLISRASYEAEKSILRHILEGKEAVTPLMERVPGELMEKLTSGQRAATRMI
LETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESGRPRVVGLGPTHRAVGEMRSAGVDAQTLASFLHDT
QLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSA
ADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEA
QQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDAREKAGELGKEQVM
VPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVT
LYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSGGQQTRVIRPAQVRAEQHIDLAYAI
TAHGAQGASETFAIALEGTEGSRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAHDVF
EPKPDREVMNAERLFSTARELRDVAAGRAVLRQAGLAGGDTPARFIAPGRKYPQPYVALPAFDRNGKSAG
IWLNPLTTDDGNGLRGFSGEGRVKGSGDAQFVALQGSRNGESLLADNMQDGVRIARDNPDSGVVVRIAGE
GRPWNPGAITGGRVWGDIPDNSVQPGAGNGEPVTAEVLAQRQAEEAIRRETERRADEIVRKMAENKPDLP
DSKTEQAVREIAGQERDRSAISEREAALPESVLRESQREREAVREVARENLLQERLQQMEQDMVRDLQKE
KTLGGD
>gi|218534563|ref|YP_002401093.1| conjugal transfer pilus acetylation protein TraX [Escherichia coli S88]
MTTDNTNTTRNDSLAARTDTWLQSLLVWSPGQRDIIKTVALVLMVLDHANRILHLDQTWMFLAGRGAFPL
FALVWGLNLSRHAHIRQSAINRLWGWGIIAQFAYYLAGFPWYEGNILFAFAVAAQVLTWCETRSGWRTAA
AILLMALWGPLSGTSYGIAGLLMLAVSHRLYRAEDRTERLALVACLLAVIPALNLATSDAAAVAGLVMTV
LTVGLVSCAGKSLPRFWPGDFFPTFYACHLAVLGVLAL
>gi|218534564|ref|YP_002401094.1| conjugal transfer fertility inhibition protein FinO [Escherichia coli S88]
MWYLWPQEDDSSEAEHSMTEQKRPVLTLKRKTEGGTPVRSRKTIINVTTPPKWKVKKQKLAEKAAREAEL
AAKKAQARQALSIYLNLPTLDEAVNTLKPWWPGLFDGDTPRLLACGIRDVLLEDVAQRNIPLSHKKLRRA
LKAITRSESYLCAMKAGACRYDTEGYVTEHISQEEEAYAAERLAKIRRQNRIKAELQAVLNEK
>gi|218534565|ref|YP_002401095.1| conserved Hypothetical protein YigA [Escherichia coli S88]
MNGFRNSSRNGQVWRWQRAGSRAVILEVSGRWMEAAEAWRRAAGVAPRTDWQQFARKRAAHCHRRCRGRV
>gi|218534566|ref|YP_002401096.1| putative nuclease YigB [Escherichia coli S88]
MLRYSGGLKYRCHLFDMENNMRKYIPLVLFIFSWPVLSAYIHGRVVRVLDGDTIEVMDSRKAVRIRLVNI
DAPEKKQDYGRWSTDMMRSLVAGKTVTVTYFQRDRYGRILGQVYAPDGMNINQFMVRAGAAWVYEQYNTD
LRHNSQVADFKKL
>gi|218534567|ref|YP_002401097.1| replication protein [Escherichia coli S88]
MSQTENAVTSSLSQKRFVRRGKPMTDSEKQMAAVARKRLTHKEIKVFVKNPLKDLMVEYCEREGITQAQF
IEKIIKDELQRLDILK
>gi|218534568|ref|YP_002401098.1| replication protein [Escherichia coli S88]
MQDGVTDLQQTYYRQVKNPNPVFTPREGAGTLKFCEKLMEKAVGFTSRFDFAIHVAHARSKGLRRRMPPV
LRRRAIDALLQGLCFHYDPLANRVQCSITTLAIECGLATESAAGKLSITRATRALTFLAELGLITYQTEY
DPLIGCYIPTDITFTPALFAALDVSEDAVVAARRSRVEWENRQRKKQGLDTLGMDELIAKAWRFVRERFR
SYQTELKSRGIKRARARRDANRERQDIVTLVKRQLTREISEGRFTANREAVKREVERRVKERMILSRNRN
YSRLATASP
>gi|218534569|ref|YP_002401099.1| conserved hypothetical protein YacA, possible repressor [Escherichia coli S88]
MAQVNMSLRIDAELKDAFMAAAKSMDRNGSQLIRDFMRQTVERQHNTWFRDQVEAGRQQLERGDVLPHDM
VESSAAAWRDEMSRKVAGK
>gi|218534570|ref|YP_002401100.1| putative plasmid stabilisation system protein YacB [Escherichia coli S88]
MMEIFWTMLASQDRKRIREYIAEQNLMAAIELDERIGYSASSLAGQPYKGRNGRVEGTRELVIHPHFVLV
YEVDSQWGKVYILRVLHTAQKWP
>gi|218534571|ref|YP_002401101.1| putative exoribonuclease YacC [Escherichia coli S88]
MNNDELATRRAQAIAEDRCFSKERLRDEFRMKPAPGAEPVKWYKNTYGGRFAVYRIADCVPMREKRPLTS
KQLLAGQRLSVLSRLNSTSGRMARQAYDWLSLAPLFLDTETTGLDNTAEALEIGLTDASGQVVFETRLKP
TVAIGAQAAAVHGISEQALCGAPSWTDVARQLRHAIGDRPVIIFNARFDIRILKQTAAAHSDPADWLEEL
TVYCAMELAAGYYGATNRYGTISLACAASQAGLTWEGQAHSAIADARMTAGVVNAIAAYHLELLQEQARL
KI
>gi|218534572|ref|YP_002401102.1| Colicin-Ia [Escherichia coli S88]
MSDPVRITNPGAESLGYDSDGHEIMAVDIYVNPPRVDVFHGTPPAWSSFGNKTIWGGNEWVDDSPTRSDI
EKRDKEITAYKMTLSAQQKENENKRTEAAKRLSAAIAAREKDENTLKTLRAGNADAADITRQEFRLLQAE
LREYGFRTEIAGYDALRLHTESRMLFADADSLRISPREARSLIEQAEKRQKDAQNADKKAADMLAEYERR
KGILDTRLSELEKNGGAALAVLDAQQARLLGQQTRNDRAISEARNKLSSVTESLNTARNALTRAEQQLTQ
QKNTLDGKTIVSPEKFPGRSSTNHSIVVSGDPRFAGTIKITTSAVIDNRANLNYLLTHSGLDYKRNILND
RNPVVTEDVEGDKKIYNAEVAEWDKLRQRLLDARNKITSAESAVNSARNNLSARTNEQKHANDALNALLK
EKENIRNQLAGINQKIAEEKRKQDELKATKDAINFTTEFLKSVSEKYGAKAEQLAREMAGQAKGKKIRNV
EEALKTYEKYRADINKKINAKDRAAIAAALESVKLSDISSNLNRFSRGLGYAGKFTSLADWITEFGKGVR
TENWRPLFVKTEAIIAGNAATALVALVFSILTGSALGIIGYGLLMAVTGALIDESLVEKANKFWGI
>gi|218534573|ref|YP_002401103.1| Colicin-Ia immunity protein [Escherichia coli S88]
MNRKYYFNNMWWGWVTGGYMLYMSWDYDFKYRLLFWCISLCGMVLYPVAKWYIEDTALKFTRPDFWNSGF
FADTPGKMGLLAVYTGTVFILSLPLSLIYILSVIIKRLSVR
>gi|218534574|ref|YP_002401104.1| conserved hypothetical protein YbaA [Escherichia coli S88]
MTFEQKKARAIALMDSKKMWRSNYAPPLLCILWRLGIRLPPLPFMPFWQVTVLTGGLWGISWGCAMWFIY
WGRRKVNRLPPWDDV
>gi|218534575|ref|YP_002401105.1| conserved hypothetical protein YdeA [Escherichia coli S88]
MTQSRRPSPLQRRMLIVLAALDEKRPGPVLTRDIERVLERSGEAPVYGPNLRASCRRLEDAGWLRTLRAP
NLQLAVELTDAGRAVAQPLLLAEQDRLRAEQRAAEVVVLPLVPAAGLPADGTSATDLAVQLNGITYQACR
GDFVVHLDGSTCLQLWNKEGRVVRREGDPLEVAQWLQACHDAGMEVRVQINESAAP
>gi|218534576|ref|YP_002401106.1| conserved hypothetical protein YdfA [Escherichia coli S88]
MDEERVFSLSYEQLTRFAEKRIRECNLDSQGVTYLCESAKAGAVLIFWHELAINGYASMNAIKRQEIIDA
DHQRLRKLIWPEDDWK
>gi|218534577|ref|YP_002401107.1| Putative acetyltransferase [Escherichia coli S88]
MKFMECAVRDVIYGTNVRIVKPVNIYECELRDNVFVGPFVEIQKGCVIGSGSRIQSHTFICENVTLGENC
FIGHNVTFANDLFRSGAPDPSPDNWISITLGDSVTVGSGAIILSPYICSGAVIGAGSVVVKPIENKGIYA
GNPARLLRIL
>gi|218534578|ref|YP_002401108.1| conserved hypothetical protein, predicted dehydrogenase [Escherichia coli S88]
MNIAIIGAGPAGIISARNAIKAGHSVVLFEKNTRIGGIWNPWSGGAYRNACMQNSRYTFHYTGFPPGDID
ERSWMQMSDRVRLLGRGW
>gi|218534579|ref|YP_002401109.1| conserved hypothetical protein, Predicted dehydrogenase [Escherichia coli S88]
MGTKSDGQVEVDDNGYVMGSSEKGAYFRVHASKSETDHNLGLHIQLVFENGEIRYSTHHENRLLLILFND
TNTETIGFDALKRLPDPPRELPFWSDSFIHLHDDWCALIKYGHSSPKLADLSSGLHIQEIIEAF
>gi|218534580|ref|YP_002401110.1| conserved hypothetical protein, Predicted dehydrogenase [Escherichia coli S88]
MENGFPHVKRIDLNEWLRYKQLPFVCEKPLSTDLNSARYLQEIAPKGSIVSFNYRYNPVIDMIMRLRNEK
KLGELHFFSAEFNKNSALTRHHLTWRDSAQQSKSSGALGDLSCHLLDLFCFIGESPVVVHGIKTVKGTRG
YKIRWSG
>gi|218534581|ref|YP_002401111.1| colicin V immunity protein [Escherichia coli S88]
MDRKRTKLELLFAFIINATAIYIALAIYDCVFRGKDFLSMHTFCFSALMSAICYFVGDNYYSISDKIKRR
SYENSDSK
>gi|218534582|ref|YP_002401112.1| Colicin V precursor (Microcin V bacteriocin) [Escherichia coli S88]
MRTLTLNELDSVSGGASGRDIAMAIGTLSGQFVAGGIGAAAGGVAGGAIYDYASTHKPNPAMSPSGLGGT
IKQKPEGIPSEAWNYAAGRLCNWSPNNLSDVCL
>gi|218534583|ref|YP_002401113.1| Colicin V secretion/processing ATP-binding protein CvaB [Escherichia coli S88]
MTNRNFRQIINLLDLRWQRRVPVIHQTETAECGLACLAMICGHFGKNIDLIYLRRKFNLSARGATLAGIN
GIAEQLGMATRALSLELDELRVLKTPCILHWDFSHFVVLVSVKRNRYVLHDPARGIRYISREEMSRYFTG
VALEVWPGSEFQSETLQTRISLRSLINSIYGIKRTLAKIFCLSVVIEAINLLMPVGTQLVMDHAIPAGDR
GLLTLISAALMFFILLKAATSTLRAWSSLVMSTLINVQWQSGLFDHLLRLPLAFFERRKLGDIQSRFDSL
DTLRATFTTSVIGFIMDSIMVVGVCVMMLLYGGYLTWIVLCFTTIYIFIRLVTYGNYRQISEECLVREAR
AASYFMETLYGIATVKIQGMVGIRGAHWLNMKIDAINSGIKLTRMDLLFGGINTFVTACDQIVILWLGAG
LVIDNQMTIGMFVAFSSFRGQFSERVASLTSFLLQLRIMSLHNERIADIALHEKEEKKPEIEIVADMGPI
SLETNGLSYRYDSQSAPIFSALSLSVAPGESVAITGASGAGKTTLMKVLCGLFEPDSGRVLINGIDIRQI
GINNYHRMIACVMQDDRLFSGSIRENICGFAEEMDEEWMVECARASHIHDVIMNMPMGYETLIGELGEGL
SGGQKQRIFIARALYRKPGILFMDEATSALDSESEHFVNVAIKNMNITRVIIAHRETTLRTVDRVISI
>gi|218534584|ref|YP_002401114.1| Colicin V secretion protein CvaA [Escherichia coli S88]
MFRQDALENRKMKWQGRAILLPGIPLWLIMLGSIVFITAFLMFIIVGTYSRRVNVSGEVTTWPRAVNIYS
GVQGFVVRQFVHEGQLIKKGDPVYLIDISKSTRNGIVTDNHRRDIENQLVRVDNIISRLEESKKITLDTL
EKQRLQYTDAFRRSSDIIQRAEEGIKIMKNNMENYRYYQSKGLINKDQLTNQVALYYQQQNNLLSLSGQN
EQNALQITTLESQIQTQAADFDNRIYQMELQRLELQKELVNTDVEGEIIIRALSDGKVDSLSVTVGQMVN
TGDSLLQVIPENIENYYLILWVPNDAVPYISAGDKVNIRYEAFPSEKFGQFSATVKTISRTPASTQEMLT
YKGAPQNTPGASVPWYKVIATPEKQIIRYDEKYLPLENGMKAESTLFLEKRRIYQWMLSPFYDMKHSATG
PIND
>gi|218534585|ref|YP_002401115.1| hypothetical protein pECS88_0118 [Escherichia coli S88]
MPFITPSLPRIYTVYNDSDIVTRICRASGMEGGTPLFHMIPPKPDVSRYSRPKVTSLLPPAVIRASAMH
>gi|218534586|ref|YP_002401116.1| conserved hypothetical protein YacA, possible repressor [Escherichia coli S88]
MAQVNMSLRIDAELKDAFMAAAKSMDRNGSQLIRDFMRQTVERQHNTWFRDQVEAGRQQLERGDVLPHDM
VESSAAAWRDEMSRKVAGK
>gi|218534587|ref|YP_002401117.1| phospho-2-dehydro-3-deoxyheptonate aldolase [Escherichia coli S88]
MQSASKLIYRGKLLGSLPTVGEIHKEIAVSEETVTWISLQRDIIANILLGKDPRLLVIVGPCSIHDVQAA
VDYAKRLFVLQNKYLSKMYIVMRTYFEKPRTRKGWKGIMHDPDLNGSYDVEKGIRYARQCLSSITTMRVA
TATEFLDPFLTPYIADLICWGAIGARTTESQTHRQLASGLHCPVGFKNSTDGNINLAIDAIIAAREQHIV
YMTSLTNSISTLLTDGNPHGHLILRGGREPNYGLSDITKAVKLMHDEGINHRLIIDCSHGNSGKVAKRQI
SVARQVIDNRKKIPGYVAGIMVESFLQDGKQSDSFPLEYGQSVTDECISWQQTEQLLSTLAAQL
>gi|218534588|ref|YP_002401118.1| outer membrane receptor FepA [Escherichia coli S88]
MRINKILWSLTVLLVGLNSQISVAKSSDDDNDETLVVEATAEQVLKQQPGVSVITSEDIKKTPPVNDLSD
IIRKMPGVNLTGNSASGTRGNNRQIDIRGMGPENTLILIDGVPVTSRNSVRYSWRGERDTRGDTNWVPPE
QVERIEVIRGPAAARYGSGAAGGVVNIITKRPTNDWHGSLSLYTNQPESSDEGATRRANFSLSGPLAGNA
LTTRLYGNLNKTDADSWDINSPVGTKNAAGHEGVRNKDINGVVSWKLNPQQILDFEAGYSRQGNIYAGDT
QNSSSSAVTESLAKSGKETNRLYRQNYGITHNGIWDWGQSRFGVYYEKTNNTRMNEGLSGGGEGRILAGE
KFTTNRLSSWRTSGELNIPLNVMVDQTLTVGAEWNRDKLDDPSSTSLTVNDSDISGISGSAADRSSKNHS
QISALYIEDNIEPVPGTNIIPGLRFDYLSDSGGNFSPSLNLSQELGDYFKVKAGVARTFKAPNLYQSSEG
YLLYSKGNGCPGGCYLIGNKDLDPEISVNKEIGLEFTWEDYHASVTYFRNDYQNKIVAGDNVIGQTASGA
YILKWQNGGKALVDGIEASMSFPLVKDRLNWNTNATWMITSEQKDTGNPLSVIPKYTINNSLNWTITQAF
SASVNWTLYGRQKPRTHAETRSEDTGGLSGKELGAYSLVGTNFNYDINKNLRLNVGVSNILNKQIFRSSE
GANTYNEPGRAYYAGVTASF
>gi|218534589|ref|YP_002401119.1| IroE, putative hydrolase [Escherichia coli S88]
MYAREYRSTRPHKAIFFHLSCLTLICSAQVYAKPDMRPLGPNIADKGSVFYHFSVTSFDSVDGTRHYRVW
TAVPNTTAPASGYPILYMLDGNAVMDRLDDELLKQLSEKTPPVIVAVGYQTNLPFDLNSRAYDYTPAAES
RKTDLHSGRFSRKSGGSNNFRQLLETRIAPKVEQGLNIDRQRRGLWGHSYGGLFVLDSWLSSSYFRSYYS
ASPSLGRGYDALLSRVTAVEPLQFCAKHLAIMEGSATQGDNRETHAVGVLSKIHTTLTILKDKGVNAVFW
DFPNLGHGPMFNASFRQALLDISGENANYTAGCHELSH
>gi|218534590|ref|YP_002401120.1| IroD, putative ferric enterochelin esterase [Escherichia coli S88]
MLNMQQHLSAIASLRNQLAAGHIANLTDFWREAESLNVPLVTPVEGAEDEREVTFLWRARHPLQGVYLRL
NRVTDKEHVEKGMMSALPETDIWTLTLRLPASYCGSYSLLEIPPGTTAETIALSGGRFATLAGKADPLNK
MPEINVRGNAKESVLTLDKAPALSEWNGGFHTGQLLTSMRIIAGKSRQVRLYIPDVDISQPLGLVVLPDG
ETWFDHLGVCAAIDAAINNGRIVPVAVLGIDNINEHERTEILGGRSKLIKDIAGHLLPMIRAEQPQRQWA
DRSRTVLAGQSLGGISALMGARYAPETFGLVLSHSPSMWWTPERTSRPGLFSETDTSWVSEHLLSAPPQG
VRISLCVGSLEGSTVPHVQQLHQRLITAGVESHCAIYTGGHDYAWWRGALIDGIGLLQG
>gi|218534591|ref|YP_002401121.1| IroC, ATP binding cassette (ABC) transporter homolog [Escherichia coli S88]
MPANHTPTPAQSWIVRLARVCWERKKLSVIVVVASVSTILLAALTPLLTRQAVNDALAGNPARLPWLACG
LLLIAFFDFIGNYVRRGYAGMLSLWVQHTLRGRVFDSIQKLDGAGQDALRTGQVISRTNSDLQQVHTLLQ
MCPVPLAVFTYYIAGIAVMLWMSPAMTLIVVCVLVCLAITALRARRRVFAQTGLASDQLANLTEHIREVL
AQISVVKSCVAEMRETHWLDRQSRQIVRVRIGAVISQAMPGATMLALPVLGQIVLLCYGGWSVMHGRIDL
GTFVAFASFLAMLTGPTRVLASFLVIAQRTQASVERVFALIDTRSQMEDGTESINSQVVGLELENMSFDY
HHGDRHILSNISFSLRAGETVAVVGASGSGKSTLLMLLARFYDPCSGKIWLNTSEGRQNLRDIRLEALRR
RVGIVFEDAFLFAGTVAENIAYGHPQATADDIRRAAAAAGASDFINALPKGFDSLLTERGTNLSGGQRQR
IALARALITAPDVLILDDTTSAVDAVTEAEINTALGRYADEGHMLLVIARRRSTLQLASRVVVLDKGRMV
DTGTPAELEARCPAFRALMTGDSDFLATSHNSHNELWPAEPATQDDVTDTGDKGFVARMTRVPENAVQQA
LAGKGRKVTSLLKPVAWMFVIAALLIALDSAAGVGVLILLQHGIDSGVAAGDMSIIGLCALLALCLVIVG
WCSYSLQTVFAARAAESVQHSVRLRSFGHMLRLGLPWHEKHADSRLTRMTVDVDSLARFLQNGLAGAATS
LVTMFAIAATMFWLDPFLALTALSAVPVAALATMIYRRLSTPAYAQARLEIGKVNSTLQEKVSGLRVVQS
HGQQELEGARLRALSERFRATRVRAQKYLAVYFPFLTFCTEASYAAVLLVGASQVAAGEMTAGVLAAFFL
LLGQFYGPVQQLSGIVDAWQQATASGKHIDELLATEGTENLGSSSVLPVTGALHLDEVTFSYPDSHEPAL
NKLTLTIPEGMVVAVVGRSGAGKSTLIKLIAGLYFPTHGNIRIGVQMLDDASLTEYRRQIGLVDQDVALF
SSDIAENIRYSRPSATNEDVEIASQRAGLYEMVCNLPQGFRTPVNNGGADLPAGQRQLIALARAQLANAH
ILLLDEATSCLDRTSEERLMSSLTDVVHAGKHSALIVAHRLTTAQRCDLIAVIDKGLLAEYGTHEQLLSA
GGLYTRLWHDSVSSTALHRQHNMKEETPG
>gi|218534592|ref|YP_002401122.1| IroB, putative glucosyltransferase [Escherichia coli S88]
MRILFVGPPLYGLLYPVLSLAQAFRVNGHEVLIASGGQFAQKAAEAGLVVFDAAPGLDSEAGYRHHEAQR
KKSNIGTQMGNFSFFSEEMADHLVEFAGHWRPDLIIYPPLGVIGPLIAAKYDIPVVMQTVGFGHTPWHIK
GVTRSLTDAYRRHNVGATPRDMAWIDVTPPSMSILENDGEPIIPMQYVPYNGGAVWEPWWERRPERKRLL
VSLGTVKPMVDGLDLIAWVMDSASEVDAEIILHISANARSDLRSLPSNVRLVDWIPMGVFLNGADGFIHH
GGAGNTLTALHAGIPQIVFGQGADRPVNARVVAERGCGIIPGDVGLSSNMINAFLNNRSLRKASEEVAAE
MAAQPCPGEVAKSLITMVQKG
>gi|218534593|ref|YP_002401123.1| hypothetical protein pECS88_0130 [Escherichia coli S88]
MSKSEPPPPRRPKHYRPVKTGELIGMDAIELRMGEMRRYIITMIDEHSDYVLALAVPSLNSDIVNHFFSR
AARLFPVGISQIITDNGKEFLGSFDKTLQEAAIKHLWTYPYTPKMNAICERFNRALREQFIEFNEILLFE
DLALFNLKLAEYLALYNSKRLHKALALTTPVEYILKENKNCNMWWTHTQQTHRPPRLGRYVGWLVQTSGY
G
>gi|218534594|ref|YP_002401124.1| hypothetical protein pECS88_0131 [Escherichia coli S88]
MRLSVMADIATMRMKALHFWDKHGISAASEAFGVSCRTLYWWRQLLIKGGPEGLIPHSKAPLVRRKKHWH
PDVLKEIRRLRTELPNLGKEQIFVRLKPWCA
>gi|218534595|ref|YP_002401125.1| hypothetical protein pECS88_0132 [Escherichia coli S88]
MTAKVKREIKRWPKSENEALRDDVAAGRRRLHIRSICPSPREATTASGVDNAAPPTGRHR
>gi|218534596|ref|YP_002401126.1| Iss (Increased serum survival) [Escherichia coli S88]
MKKMLFSAALAMLITGCAQQTFTVGNKPTAVTPKETITHHFFVSGIGQEKTVDAAKICGGAENVVKTETQ
QTFVNGLLGFITFGIYTPLEARVYCSQ
>gi|218534597|ref|YP_002401127.1| insertion sequence 2 OrfA protein [Escherichia coli S88]
MIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWCKQYQEGSLTAVAAGEQVVPA
SELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLPGDGE
>gi|218534598|ref|YP_002401128.1| transposase ORF 2, IS2 [Escherichia coli S88]
MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVIGELPTYGYRR
VWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFRCDN
GEKLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAVERRFGNELPASPVEWLTDNGSCYRANETRQ
FARMLGLEPKNTAMRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRS
PREYLRQRACNGLSDNRCLEI
>gi|218534599|ref|YP_002401129.1| hypothetical protein pECS88_0136 [Escherichia coli S88]
MKFFGIYRTQKNADITDRLLSVPNSADPKAMYLSTERVPDILGTDVF
>gi|218534600|ref|YP_002401130.1| conserved hypothetical protein; putative GTPase [Escherichia coli S88]
METTSVIILNGFLGAGKTTLLKNLLIQAHEKQLSVSVIVNDMSELDVDGVLIANTDIVDAKDNNFVSITA
DSISSPAGLKKMDLAINHLLDHNKPDVMLIETSGSSHPLPLVKYLRRHSRVRLKAFLTLVDTVMLHEDYN
DGKKLIPTLQENLRHNKRGLENLLAEQIMFCNRLLLTRNDRLPFDIISAVAKAIHPLNPSVDVLAVSWGN
IELSTLLAIPDYNFDRVELLISELEALVGNMDTPCNNEELIWRVIRDDRPFHPQRLWDTCHRFMGMGVYR
SKGFFWLPGRDDLALLWNQSAGSISLALIGYWKAGVLEHTDNNLTREERSALQRHIDTASGRFGDRCCQL
TIIGNATEVNDFTHALSLCLLTEEEIQWWMSGGVFPDPWPQKVTRLS
>gi|218534601|ref|YP_002401131.1| putative transposase ORF B (fragment), IS2 [Escherichia coli S88]
MGMQSSYLGGLSTADSDYRVNETRQFARMLGLKSKNTAVRSPVSNGIAESFMKTIKRDYISIMPKLVVCF
LWSSLCSVLRKNILEPVEQMNAWIRGAINKKKKWK
>gi|218534602|ref|YP_002401132.1| putative transposase (fragment) [Escherichia coli S88]
MAINDAGMFTVKEINRLKILQDVIDRNIRPGQAAEMLGITPRHCSRLLKRYRQYGPLGMNNQSRGRTGNR
LLPASLTDQALSIIREHYRDFGPTLAREKLEEVHGLVLGKETIRRLMIKAGLWIPRRQRAPKIHQPRYRR
PCTGELIQIDGCDHHWFENRGRPCSALVYVDDATSRLMHLLFVKSESTFTYFEATRGYIEKYGKPMILYS
DKASVFRVNNKHATTGPGETQFARAMRCLNITPLCAETSQAKGRVERAHLTLQDRLVKELRLKGICTIEA
ANAFAEGL
>gi|218534603|ref|YP_002401133.1| hypothetical protein pECS88_0142 [Escherichia coli S88]
MCALSFGYCNQSQRRFLRNANNFNDIIYKGNRGKIRVSQNPEPLRGAKSQTASITEQHVKKS
>gi|218534604|ref|YP_002401134.1| hypothetical protein pECS88_0143 [Escherichia coli S88]
MAIINIYSKRQRKIRGEVNDVYQYNNIPHALRVQIIKIITDSIGFPSSNERYTSYRNEADKVYAYIHEIL
SKEYGVFSLKEFAKNDFDALVDFFLKERNTEKCLDFIEICFQILVSHVAKNHYEFKDITSQSPGDAVIEL
NERFREHGVGYQFESEEIIRIDSQLIHADVVKPTLILLSGEPLFEGANDEFLAAHEHYRHKRYKECLNDC
LKSFESIMKAIHDKNNWKYSPNDTASKLINSCLSQNLIPAYLQSQFTSLKTMLETGIPTIRNKNAGHGQG
ADIKEVPEELVSYMLHLTATNLLFLLKCEKNIK
>gi|218534605|ref|YP_002401135.1| putative type I secretion outer membrane protein EtsC [Escherichia coli S88]
MKILSSLTLCLITALCSGCTNVLKSDYRAPEVNYPINWTKGDVDGNTSPFDWEEFNDPNLDNWLHLVMTS
NNDIAIAALRIHRAQLDAERTGITNTPALKAALSMDGKKQLNNSSGWAKSGSASLGTSYELDLWGKIARQ
RDVAEWAVHASEEDFRSARLMLLSEASNNYWRIGFVNQQITTLQQSIDYAKETLRLAEVRYRAGNISSLD
VIDAQQNLLTQENQLTGLQREHSQLLNQQAVLLGTVPGCQIVEPTTLPKGSLPKVNANIPASILMRRPDI
SAKEWQLREALATVDIKRSEYYPTFNLTGALGTSSASLLALLHNPVGSVGANLTLPFLEWRQRDIEVKIA
RNDYEQRVLEFKQLLYKAMSSIEDALSFRNQLLLQETRLREELELARKSEWLNEVRYRHGAVRISFWLDA
QEKRRQAELRLDENRFNQLQNLAKIYLEFGGASTFP
>gi|218534606|ref|YP_002401136.1| putative type I secretion ATP binding protein EtsB [Escherichia coli S88]
MKKLIELKGVSRTYGNGDQTRTVLKNVDLTIVAGEMVAIIGVSGSGKSTLMNIMGCLDVPNRGDYYIDGQ
NAACLSPDELARVRREHIGFIFQRYHLIPDLSALGNVEIPAIYANSERDSRRQRATALLGRLGLEGREHH
KPCELSGGQQQRVSIARALINGGKIILADEPTGALDSQSGQEVLAILNELNRRGHTVVMVTHDMKVARHA
KRIIELCDGEIIADSGGCVSATETLPKTNRIRQSYWKTLLDRTRESMQMALKAMKTHRLRTTLTMIGIVF
GIASVVTVVALGEGARQETLEEIKSLGTNVVSIYPGQDLFDDSIESIRTLVPADANALAKQGFIDSVSPE
VSASDNIRFLGKSAIASINGVGREHFRVKGIELLQGTTFRDDRNALQEVIIDENTRKAIFDNTGLQALGQ
IVFLGSVPARVVGIAKSNNRSDASNRITVWMPYSTVMYRIVGKPVLTGISVRLKDNVDNEAAISAISQLL
TRRHGIKDFQLYNFEQIRKSIEHTSMTFSILILMVACISLMIGSIGVMNIMLISVTERTHEIGVRMAVGA
RRSDIMQQFIIEAVLVCLIGGALGIALSYITGALFNALADGIFAAIYSWQAAVAAFFCSTLIGIIFGYLP
ARKAARMDPVISLASE
>gi|218534607|ref|YP_002401137.1| Putative type I secretion membrane-fusion protein EtsA [Escherichia coli S88]
MLWKTWTMLMKYISHRAIICTLTLLIIIITVLFTFLRSSDVPEYITAPVRKGDIENSVLATGRIDAIERV
NVGAQVSGQLKSLKVKQGDHVTKGQLIAEIDDLPQCNDLRNAEAALNEVKAELQSKQALLKQAELRFKRQ
LRMLRENASSHEDFESAEAMLATTRAELHSLNAKLVQAQIEVDKKKLALEYTRVVAPMDGIVIAIVTQQG
QTVNSNQSAPTIIKLARLDVMTIKAQISEADITRISVGQKARFSIFSEPDKHYSATLRAVELAPESVMKD
DSLASNTSASGSGTSNASVYYNALFDVPNPENRLRIAMTAQVTLITDEAQNTLLVPIQAVHRNEGKKQQV
LVLAADGRLEPRNVKTGITNSVDIQILEGLNVGENVVLSLPDKKEPEERIML
>gi|218534608|ref|YP_002401138.1| transposase ORF B, IS3 family, IS51 group [Escherichia coli S88]
MMPLLDKLREQYGVGPLCSELHIAPSTYYHCQQQRHHPDKRSARAQRDDWLKKEIQRVYDENHKVYGVRK
VWRQLLREGIRVARCTVARLMAVMGLAGVLRGKKVRTTISRKAVVAGDRVNRQFVAERPDQLWVADSTYV
STWQGVVYVAFIIDVFAGYIVGWRVSSSMETTFVLDALEQALWARRPSGTVHHSDKGSQYVSLAYTQRLK
EAGLLASTGSTGDSYDNAMAESINGLYKAEVIHRKSWKNRAEVELATLTWVDWYNNRRLLERLGHTPPAE
AEKAYYASIGNDDLAA
>gi|218534609|ref|YP_002401139.1| transposase ORF A, IS3 family, IS51 group [Escherichia coli S88]
MTKNTRFSPEVRQRAIRMVLESQGEYDSQWAAICSIAPKIGCTPETLRVWVRQHERDTGGGDGGLTTAER
QRLKELERENRELRRSNDILRQASAYFAKAEFDRLWKK
>gi|218534610|ref|YP_002401140.1| hypothetical protein pECS88_0154 [Escherichia coli S88]
MWPHVALFIPFYVRISGESVKPGMITAPVIHVPENIRAYRALVTANKALVGHFMPGTSVTWKPVPSSWGY
FVNSYLKGDKMAKSCDYEAIRVFISVNVGKYTNNAITVNYSDSVCATRHYHSTKINSGG
>gi|218534611|ref|YP_002401141.1| outer membrane protease [Escherichia coli S88]
MYLKILATALSAPVAFAALASDTGLSFTPEKISTEIDFGTLSGKAKERVYLPEEKGRKASQLDWKYSNAP
IVKGAFNWDLLPRVSVGASGWTTLAGRGGNMVDRDWLDTSNPGTWTDESKHPNTRLNFANEFDLNIKGWL
LNQPDYQLGLMAGYQENRYSFTAKGGSYIYSSEGGFRDETGSFPDGERAIGYKQHFKMPYIGLTGNYRYD
SFEFGGSFKYSGWVKASDNDEHYNPEKRITYRSDVNNQNYYSVSLHAGYYITPAAKVYVEGTWNRITNKK
GDTSLYSRNLNISDHTKNGAGIESYNFMTTAGLKYYF
>gi|218534612|ref|YP_002401142.1| hemolysin HlyF [Escherichia coli S88]
MKLLLLTGATGFLGGAVLDKLLDNCNNINLLLLVRAPTPQAGLERIKENMRKFNVCEERLHALTNDNILP
GDLNNPEAFLMDPRLDEVTHVINCAAIASFGNNPFIWNVNVTGTLAFARRMAKVAGLKRFLHVGTAMSCT
PHTGSLVKEESASSETGEHLVEYTHSKATIEYLMRKQCPDLPLLVARPSIIVGHSRLGCLPSTSIFWVFR
MGLMLQKFMCSLDDKIDVIPVDYCADALLMLLESSLINGEIVHISAGKESSVTFSAIDEAVARALNCDPV
GDRYTKVSYDILAMSRHDFKNIFGPCNERLMLKAIRLYGAFSMLNVCFSNDKLLSIGMPKPPKFTDYIKY
CIETTKHLSIQQQMEVDFK
>gi|218534613|ref|YP_002401143.1| conserved hypothetical protein; putative Mig-14 protein [Escherichia coli S88]
MTLSIKNIKRIITAWKPSTFETYKKTFEKYGGSVNMHPDVVSYFMIHHDWKFDFFHYEKDGDIKGSYFLC
NGKQIGIMARRSYPLSSDEVLIPFSPHARCFFPDKTNKLSIINKQNIINATWKIARKKQNCIIKESFSPK
FEKTRRNEIQRFIRNGGEIKCISKLSDKEISSSYISLFHSRFGGTLPCYEYDNLLMFISHLRELMFGHVL
FWDNKPCAIDIVLKSESSCNVYYDVPNGAVLNDENCMKLSPGSVLMWLNIDKARRYCQDNNKKMIYSIGA
FRPEWKYKLLWSVPCKVGKCLC