LOCUS NC_011563 4149 bp DNA circular BCT 08-MAY-2009 DEFINITION Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 plasmid pCFPG4, complete sequence. ACCESSION NC_011563 VERSION NC_011563.1 GI:212550314 DBLINK Project:29025 KEYWORDS . SOURCE Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 ORGANISM Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Candidatus Azobacteroides. REFERENCE 1 AUTHORS Hongoh,Y., Sharma,V.K., Prakash,T., Noda,S., Toh,H., Taylor,T.D., Kudo,T., Sakaki,Y., Toyoda,A., Hattori,M. and Ohkuma,M. TITLE Genome of an endosymbiont coupling N2 fixation to cellulolysis within protist cells in termite gut JOURNAL Science 322 (5904), 1108-1109 (2008) PUBMED 19008447 REFERENCE 2 (bases 1 to 4149) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (13-NOV-2008) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 4149) AUTHORS Toyoda,A., Hongoh,Y., Toh,H., Hattori,M., Ohkuma,M. and Sakaki,Y. TITLE Direct Submission JOURNAL Submitted (21-MAR-2008) Contact:Atsushi Toyoda National Institute of Genetics, Comparative Genomics Laboratory; Yata 1111, Mishima, Shizuoka 411-8540, Japan COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AP010660. COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..4149 /organism="Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2" /mol_type="genomic DNA" /isolation_source="a single cell of termite (Coptotermes formosanus) gut protist" /host="the protist Pseudotrichonympha grassii in the gut of the termite Coptotermes formosanus" /db_xref="taxon:511995" /plasmid="pCFPG4" /note="rRNA phylotype CfPt1-2; genomovar CFP2" gene 1..1122 /locus_tag="CFPG_P4-1" /db_xref="GeneID:7039724" CDS 1..1122 /locus_tag="CFPG_P4-1" /codon_start=1 /transl_table=11 /product="replication protein A" /protein_id="YP_002308634.1" /db_xref="GI:212550315" /db_xref="GeneID:7039724" /translation="MLIMNTNYPEERPGYIPEYAVKKNALLRSIFDLSTNAQRMLAMA LARLPKEPKTPEDYRVKFSVSDFFKTFGIERGTNTNRLILNASDECASSVLKIESPDG DELQKFPWLSECTLRKYIVFIPDRETHVSKLNYHEDNAKTVKNPPALYQWDTVVMEFN PKLWETLKEFKGWSTVELNVLGKLQSKYAIRFYEWAMSWKGKAGKDGNPPGKYWFEMR LADIREKLAIPKSKYKAVKEFKRNVIKLPIEELNNADIGVRIDIAPFKRGQGVKLDLI RFDVTLYTPGKEKPANKTTPEELTEDTLIEQYRDIYQPAYDLEKETRIQQSLFAEHPR LLEPLARQAGLNAVRAHIKATQKKRGRPRKARCENEGTP" gene complement(1152..1565) /locus_tag="CFPG_P4-2" /db_xref="GeneID:7039721" CDS complement(1152..1565) /locus_tag="CFPG_P4-2" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002308635.1" /db_xref="GI:212550316" /db_xref="GeneID:7039721" /translation="MLTCLVRQVSILPRDGGLISAITAACKAVRKALSCKQEDFMKSV DELKQEYAVKLAALKKEKSEALKRAMERERKKLSLESKKNRKLDAHLKIILGGYILAD IKQRKDKVLLGKIAETLKNDDDKKLILSVLSSEGK" gene 1763..3040 /locus_tag="CFPG_P4-3" /db_xref="GeneID:7039722" CDS 1763..3040 /locus_tag="CFPG_P4-3" /codon_start=1 /transl_table=11 /product="mobilization protein MobA" /protein_id="YP_002308636.1" /db_xref="GI:212550317" /db_xref="GeneID:7039722" /translation="MAIYHLHAQIIGRSAGQSAVAAAAYRSTSRLVDRSTGVECDYTR KTKAVSSAILTPIDTPEWAKNREELWNRVQEKENRKNSQFAREIDVAIPYELKQNGEL AVKNFCKMFTNRGLVCDYAIHKPDRNGDNRNEHAHIMITTRKLTSKGWGEKDREANDK DFLLKVRKYWEICANSELKKLYVAQRIAPKPPLIEIDCRSLKEQGIDREPQRHQGKYA TRLERKKQAIESSQHLTNEQKTKMKAAINIKRGKFAGQQEQIPVEPEQLKQLESAEQL LTKEIEFLEMPKSEWAEKHPKLEKQILESEQISLIFAIKKHLPEIQEKFRQDGIKLKD ERELLEKVSLVDAKKAAKEILELGNIQKKHRPDIFEKIQTSQQEFFKKTEFYNLKFIV AEVQAARAETDRRERIAQQQSSASRQKSHSRGR" gene 3623..3931 /locus_tag="CFPG_P4-4" /db_xref="GeneID:7039723" CDS 3623..3931 /locus_tag="CFPG_P4-4" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002308637.1" /db_xref="GI:212550318" /db_xref="GeneID:7039723" /translation="MGKFSENSAGIAGAFSQSPIPYPALIPLSAVAAIPGEPVKICRC GNAGVSRLKTGWGARVFAVRQKGAQEPLGSFFCFNFCEPPHVLSTQAFLYKYISTITC" ORIGIN 1 atgctcatta tgaacacaaa ttaccctgaa gaacgtcccg gatacatccc tgagtatgcg 61 gtcaaaaaaa acgccttgct gcggtcgata ttcgacctga gcacaaacgc ccagcggatg 121 ctggcaatgg cgttagcgcg gctgccaaaa gagcctaaaa ctccggaaga ctaccgcgtc 181 aaattctccg taagcgattt tttcaaaacc tttggaattg agcgcggaac gaacacaaac 241 cggctcattt tgaacgccag cgacgaatgc gcatccagcg ttctcaaaat agagagcccc 301 gatggcgacg aacttcaaaa atttccgtgg ctttccgaat gtacattgcg aaaatacata 361 gtctttattc ccgacaggga aacgcacgtc tcaaaattaa attatcacga agacaacgca 421 aaaaccgtaa aaaacccgcc ggcgctttac cagtgggaca ctgtcgttat ggagttcaat 481 cctaaacttt gggaaacgct gaaagaattc aaaggctggt caactgtaga gttaaatgtt 541 ttgggaaaac tccaatccaa gtacgccatc cgtttttacg aatgggctat gtcgtggaag 601 ggcaaagcgg gaaaagacgg aaacccgccc ggtaaatact ggtttgaaat gcgcctggcc 661 gacatcaggg aaaaacttgc catccctaaa tcgaaataca aggcagttaa ggaatttaag 721 cgaaacgtta taaaactgcc catcgaggaa ttaaacaacg cagatatagg ggttagaata 781 gatatagcac catttaagcg ggggcaaggc gtaaaactcg acttaatccg ttttgatgtt 841 acgctataca cgccgggcaa agaaaagccg gcaaacaaga ctacaccgga agaactgact 901 gaggacacgc ttatagagca ataccgggac atttaccaac ctgcctacga tttggaaaaa 961 gaaacccgca tacagcaaag cctttttgcc gagcacccgc gattgctaga gccgctggcg 1021 cggcaagccg gactgaatgc agttagggcg catataaaag caacacaaaa aaagcggggg 1081 agaccgcgaa aagcgaggtg cgaaaacgag gggacgccct aaaatttgtg aaaatggaat 1141 tttagaagtc tctattttcc ctctgatgat aaaacagaca aaatcaattt tttgtcatca 1201 tcatttttaa gtgtttcagc tattttgcct agcaatactt tgtcttttct ttgtttaatg 1261 tccgctaaga tataaccgcc gagtataatt ttcaaatgcg cgtctaattt gcggtttttt 1321 ttactttcca gagaaagttt tttgcgttcg cgttccatag cacgttttag agcctcagat 1381 ttttcttttt ttagagccgc gagtttaacg gcgtattctt gttttaattc atctaccgac 1441 ttcataaagt cctcctgctt acaggatagc gctttgcgca cggctttgca agccgctgtg 1501 atggcggata taagaccgcc atcacggggt agtatgctga cttgccgaac aaggcaagtc 1561 agcatactac ccctagcata gaatagcgat atatgctatt ctatgctaat agcgcactta 1621 tacaaactag gtctatatat atactatata tagacctagt ttgtgtgcgg tcaggggtta 1681 cacccccgac acccctgtag caagcaggct aaagcccgct tgcccggcat aaagttagat 1741 tactttatgc cgtatagcat ttatggctat ttatcatttg cacgcccaga taatagggcg 1801 tagcgccgga caatcggcgg tagccgccgc cgcttatcgt tcaaccagcc gattggttga 1861 ccggagcaca ggggtagagt gcgattacac gcgaaaaacc aaagcggtat ctagcgcgat 1921 tttaacaccc attgatacgc cggaatgggc aaaaaaccgc gaggaacttt ggaacagagt 1981 acaagaaaaa gagaaccgga agaattcaca atttgcccgc gaaattgatg tagcaatacc 2041 ctatgaacta aaacaaaacg gagaattagc cgtaaaaaat ttttgtaaaa tgttcaccaa 2101 caggggttta gtatgcgatt acgcgataca taaacctgac cgaaatggcg ataacagaaa 2161 cgaacacgcc cacattatga taacgacaag aaaattaaca tcaaaaggct ggggagaaaa 2221 agacagggaa gcaaacgaca aggattttct tcttaaagtc cgaaaatact gggaaatttg 2281 cgcaaactcc gaattaaaaa agttgtatgt cgcccaacgg attgctccaa agccaccact 2341 gatagaaata gactgccggt cgctaaaaga gcaaggaata gaccgcgagc cacagcgtca 2401 tcaaggaaaa tacgctacac ggcttgaaag aaaaaaacaa gccatagaaa gttcacaaca 2461 tctcacaaac gaacaaaaaa caaaaatgaa agccgctata aatataaaac gcggcaaatt 2521 tgccggacag caagaacaaa tccccgtaga acccgaacaa ctaaaacaac ttgaatccgc 2581 cgaacagtta ctaacaaaag aaatagaatt tcttgaaatg cctaaaagcg aatgggcgga 2641 aaaacatcca aaacttgaaa aacaaatttt agaaagcgaa cagatttccc ttatttttgc 2701 aataaaaaaa cacttaccgg aaatacagga aaaattcaga caagacggca taaaattaaa 2761 agatgagcgg gaacttttag agaaagtgtc gctggttgac gctaaaaaag cggcaaaaga 2821 gattttagaa ctcggcaata ttcaaaaaaa acacaggccg gatatttttg aaaaaattca 2881 gaccagccaa caggaatttt tcaaaaaaac tgaattttac aatttgaaat tcattgtcgc 2941 ggaggtacaa gccgcccgcg ccgaaaccga caggcgcgag cggatagcac aacaacaatc 3001 tagcgcatcg cggcaaaaat cacacagcag ggggcgataa tggcacgagg attggcgcta 3061 ttgcgcccga tggcgttcag aggtattttt atacccgcta attttcagtt ctgcgcggcg 3121 catccgcgcc ggcggaaaaa tttttaacct tccggccaaa tagtacaccg gtttagcaaa 3181 tcgtgcttta ttcgctctac cggtttagca aatcccggaa atcgacaaac ttgactgcta 3241 agtacgcctg gcaagatgcg ccgcgtaaaa actaacagcc gcgatcacgg caaagataac 3301 cgcagtaaaa agcgggaaat agttcataaa tcgctcctat ttggcaaaaa agtctctaac 3361 aaactcaaaa atactgacta tacttgccgc tgtcgctata gttccgatag caataaatac 3421 tcgccacacc aagtgcggcg gtttcgtgtt atcggctatt tgctgcagca acgctttaat 3481 atccgcaata tcttgtttgt ccacgcttga taatatctca aaaacccgcg aaaaacaagc 3541 ctacaagccc ttttaagcgt ttcaggttaa aacccacggc acgaagcggt agaaccgctt 3601 ctaggggctt cctcgtgcgt ctatgggcaa attttcggag aatagcgccg gcattgccgg 3661 cgcatttagc caatcgccca tcccttatcc agccttaatc ccgctatcgg ctgtcgcggc 3721 tatacccggt gagccggtga aaatttgccg atgtggcaac gccggcgtga gccggctcaa 3781 aacagggtgg ggggcgcggg tttttgccgt taggcaaaaa ggggcgcaag agccgttagg 3841 ctcttttttt tgttttaatt tttgcgaacc cccacatgta cttagtactc aagcttttct 3901 ttataaatat attagtacta ttacgtgcta gtaatcaaaa aatattcctc ttgaaacgcg 3961 ttctatacgg attgaaacgc ctattttacc cctattttac gcaaatttta aaatcggttt 4021 tttgtttaag gtgtaggaaa gtccaccgta aggtgtagga aagtccaccg atatttattt 4081 taaggtgtag gaaagtccac cgatatttat tttaaggtgt attgtctgga cataatcata 4141 caccttaaa //