LOCUS NC_011408 5366 bp DNA circular BCT 22-JUL-2009 DEFINITION Escherichia coli SE11 plasmid pSE11-5, complete sequence. ACCESSION NC_011408 VERSION NC_011408.1 GI:209916817 DBLINK Project:18057 KEYWORDS . SOURCE Escherichia coli SE11 ORGANISM Escherichia coli SE11 Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia. REFERENCE 1 (bases 1 to 5366) AUTHORS Oshima,K., Toh,H., Ogura,Y., Sasamoto,H., Morita,H., Park,S.H., Ooka,T., Iyoda,S., Taylor,T.D., Hayashi,T., Itoh,K. and Hattori,M. TITLE Complete genome sequence and comparative analysis of the wild-type commensal Escherichia coli strain SE11 isolated from a healthy adult JOURNAL DNA Res. 15 (6), 375-386 (2008) PUBMED 18931093 REFERENCE 2 (bases 1 to 5366) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (23-OCT-2008) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 5366) AUTHORS Hattori,M., Oshima,K., Toh,H., Sasamoto,H. and Shiba,T. TITLE Direct Submission JOURNAL Submitted (21-OCT-2006) Contact:Masahira Hattori Graduate School of Frontier Sciences, University of Tokyo; 5-1-5 Kashiwanoha, Kashiwa, Chiba 277-8562, Japan URL :http://www.cb.k.u-tokyo.ac.jp/hattorilab/ COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AP009245. This work was done in collaboration with Yoshitoshi Ogura, Tadasuke Ooka, and Tetsuya Hayashi (University of Miyazaki), Sang-Hee Park and Kikuji Itoh (University of Tokyo), and Hidetoshi Morita (Azabu University). COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..5366 /organism="Escherichia coli SE11" /mol_type="genomic DNA" /strain="SE11" /db_xref="taxon:409438" /plasmid="pSE11-5" gene 1..1554 /locus_tag="ECSE_P5-0001" /db_xref="GeneID:6998242" CDS 1..1554 /locus_tag="ECSE_P5-0001" /codon_start=1 /transl_table=11 /product="mobilization protein MobA" /protein_id="YP_002291008.1" /db_xref="GI:209916818" /db_xref="GeneID:6998242" /translation="MIVKFHARGKGGGSGPVDYLLGRERNREGATVLQGNPEEVRELI DATPFAKKYTSGVLSFAEKELPPGGREKVMESFERVLMPGLEKNQYSILWVEHQDKGR LELNFVIPNMELQTGKRLQPYYDRADRLRIDAWQTLVNHHYGLHDPNAPENRRTLILP DNLPETKQALAESVTRGLEVLYHAGEIKGRQDVIHALTEVGLEVVRVTRSSISIADPN GGRNIRLKGAFYEQSFTDGRGVREKAERESRIYRENAERRIQQARRICKRGCDLKRDE NQRRYSPVYGLDGGIAEKTPGRGERGDDAAPEGHVKAGREFGHEVAGDSLSPVYREWR DALVSRREDTDEPGRNQGTGRDIAETEREDMGCGVCSGRGKKISGHSARDVSRGDALS GEGLDTTDGVIRNDRAGNTFAERLRAAATGLYAAAERMGERLRGIAEDVFAYATGQRD AERAGHAVESAGTALERADRTLEPVIQRELEIREERLIQEREHALSLERERQLEIQER TLDGPSLSL" gene 689..1207 /locus_tag="ECSE_P5-0002" /db_xref="GeneID:6998236" CDS 689..1207 /locus_tag="ECSE_P5-0002" /codon_start=1 /transl_table=11 /product="mobilization protein MobB" /protein_id="YP_002291009.1" /db_xref="GI:209916819" /db_xref="GeneID:6998236" /translation="MSNLLRTGAEFEKKLKERAESTEKMLNDEFSRLGESVSEAVTSN ETKIKGAIAQFTASTEESLKKHREGVKEAMMQHRKDMLKLAGSSGMRLLGIVFLLFTA SGGTLWYLGGRIQTNLEEIRVQEETLRKLNAKTWGVEFVQGGGRKFLVIPQGMSAEVT HYQGKDWIQLTE" gene 1636..1782 /locus_tag="ECSE_P5-0003" /db_xref="GeneID:6998237" CDS 1636..1782 /locus_tag="ECSE_P5-0003" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002291010.1" /db_xref="GI:209916820" /db_xref="GeneID:6998237" /translation="MRLKFIRRDRGSFSGDLLLVLADCRPVRGEAVRGGAGNRCYGKL TPHD" gene complement(1819..2799) /locus_tag="ECSE_P5-0004" /db_xref="GeneID:6998238" CDS complement(1819..2799) /locus_tag="ECSE_P5-0004" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002291011.1" /db_xref="GI:209916821" /db_xref="GeneID:6998238" /translation="MDNNFTSYFTNPKYVTNYNFNGKGLIYIENERDYVFWESIFNAH FDGMYEIKASIKNDGRRGKDALLELIPTLNKNCLLAIDGDFDYISECDYRFGKFMSNA YVLHTHSYSRESAVFSKSKIDEVVSKLRLTLPCTFDVNKPIQIISKRYFKALVGFLYL MKKNRDLAINIDIHKPIKKCEFRKYINNDFTSNDKIIQEMTSLLEPIENEIYSYIDER SIEFSSFVEQANRKGLKEDSAYRFISGHVLNDNILLPMLARIKFLMERQSLRSIASED TSRENKSNMISAIKNHYRDNCKVKTIITHLNLCANDEISKMIHSKVSAIH" gene complement(2801..3448) /locus_tag="ECSE_P5-0005" /db_xref="GeneID:6998239" CDS complement(2801..3448) /locus_tag="ECSE_P5-0005" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002291012.1" /db_xref="GI:209916822" /db_xref="GeneID:6998239" /translation="MELILEKLSSKDTDAPKGYFVEMGEKEKGKQEEKDKINTTYIST INMSANSTNEIKKSSGEKVMVLDFEIKEEKDAALKKIASGSRSSEEKKTLLDVLNGFF KDTKKEVVIEDDLIVFLEDKKTTIEIEKLSSGERQLIYTFLRVFNSERENQIILLDEP EISLHLSWQEILISSIKKIRDDCQIILVTHSPGIVMDGWMGAYKEIDSIITKAEK" gene 4367..4621 /locus_tag="ECSE_P5-0006" /db_xref="GeneID:6998240" CDS 4367..4621 /locus_tag="ECSE_P5-0006" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002291013.1" /db_xref="GI:209916823" /db_xref="GeneID:6998240" /translation="MSVRFRDACQGGGAYGKTALPWPYRFPAKFLPGIFQDISAPPVS RYRSPQPNDRAQRVSERGSGIYPVSHILLTRLCRLFSPVT" gene complement(4798..4989) /locus_tag="ECSE_P5-0007" /db_xref="GeneID:6998241" CDS complement(4798..4989) /locus_tag="ECSE_P5-0007" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002291014.1" /db_xref="GI:209916824" /db_xref="GeneID:6998241" /translation="MTKQEKTALNMARFIRSQTLTLLEKLNELDADEQADICESLHDH ADELYRSCLSRFGDDGENM" ORIGIN 1 atgatagtta agtttcatgc ccggggaaaa ggtggtggca gtggtccggt tgattacctt 61 ctggggaggg agcgtaaccg ggaaggtgca acggtacttc agggtaaccc ggaagaagtc 121 cgggagctta ttgatgccac gccatttgcg aagaaataca cgtccggtgt tctgtcgttc 181 gcagagaagg aactgccgcc gggaggacgt gaaaaagtga tggagagctt tgagcgcgta 241 ctgatgcccg gtctcgaaaa aaatcagtac agcattctgt gggtggagca ccaggacaag 301 gggcgtcttg agctgaattt tgtcattccg aacatggagc tacagaccgg aaaacgcctc 361 cagccgtact acgaccgggc agacaggctg agaattgatg cctggcagac actggtgaat 421 caccattacg ggctgcatga ccccaacgcc ccggagaacc gcagaacgct gatcctccct 481 gataacctgc cggaaacgaa acaggcgctt gctgagagcg ttacacgagg cctggaggtg 541 ctttaccatg ccggggagat aaaaggccgt caggatgtga ttcatgcgct cacagaggtg 601 gggcttgaag tggtcagggt gacgcgaagc agtatcagca ttgcagaccc gaacggcggg 661 aggaatatca gactgaaagg agcgttttat gagcaatctt ttacggacgg gcgcggagtt 721 cgagaaaaag ctgaaagaga gagccgaatc tacagagaaa atgctgaacg acgaattcag 781 caggctcggc gaatctgtaa gcgaggctgt gacctcaaac gagacgaaaa tcaaaggcgc 841 tatagcccag tttacggcct cgacggagga atcgctgaaa aaacaccggg aaggggtgaa 901 agaggcgatg atgcagcacc ggaaggacat gttaaagctg gcagggagtt cgggcatgag 961 gttgctgggg atagtctttc tcctgtttac cgcgagtggc gggacgctct ggtatctcgg 1021 cgggaggata cagacgaacc tggaagaaat cagggtacag gaagagacat tgcggaaact 1081 gaacgcgaag acatggggtg tggagtttgt tcagggcggg ggaagaaaat ttctggtcat 1141 tccgcaaggg atgtcagcag aggtgacgca ctatcagggg aaggactgga tacaactgac 1201 ggagtgatac ggaatgacag agctggaaac acatttgctg aacgccttag agcagctgca 1261 acaggactat atgcagcggc tgaacgaatg ggagagcgcc ttcgtggaat tgcagaagat 1321 gttttcgctt acgcaacggg acaacgcgat gctgaacgag cgggtcatgc agttgagtca 1381 gcaggtacag cacttgagcg agcggacaga acacttgagc cagttataca gcgagaactg 1441 gagataagag aggaacggct gatacaggag cgcgaacatg cgttatccct ggaacgggaa 1501 cgccagctgg aaatacagga acgcacactg gatggtcctt cgttgtcgct gtgatggcga 1561 aactataaaa aatggcagat tcagtggatt ttgacgggct aatgtagtct gcaccatctg 1621 gttgcatagg tattcatgcg gttaaaattt atcaggcgcg atcgcggtag cttttcgggt 1681 gatttgttgt tggttttggc tgactgccgc cccgttcgcg gcgaagctgt ccggggcggt 1741 gcgggcaaca gatgttatgg taaattaaca ccgcatgact gattcggacg ccaaaaattc 1801 gtccattgtt cccatccctt aatgtattgc agaaaccttt gaatgtatca ttttgctgat 1861 ttcatcatta gcgcaaagat ttaggtgtgt aattattgtt ttcactttgc aattgtctcg 1921 ataatggttt tttattgcag atatcatgtt tgacttgttt tctctgctag tgtcttcaga 1981 tgctatagaa cggagtgatt gccgctccat taaaaacttt attctggcta gcattggtag 2041 caaaatgtta tcattaagaa catgccctga tataaatcta taagcgctat cctcttttag 2101 tcctttacgg ttagcctgct ctacaaaaga ggagaactct atagatctct catctatgta 2161 tgagtaaatc tcattttcga ttggttcaag caaggatgtc atttcttgaa tgatcttatc 2221 attgctagtg aagtcgttgt ttatgtactt tctgaattca cattttttta ttggtttatg 2281 tatgtcgatg tttattgcta ggtctctatt ttttttcatg aggtacaaaa aaccgacaag 2341 cgctttgaaa tatcttttag atataatttg aatcggtttg tttacatcaa aggtgcaagg 2401 caatgttagc cttagtttgc taacaacttc atctattttt gattttgaaa aaacagcact 2461 ttcccgcgaa taactgtgcg tatgcaagac atacgcattt gacataaact taccaaatcg 2521 gtagtcgcat tctgatatgt aatcaaaatc accatcgatg gccaaaagac aatttttatt 2581 taatgttgga atcaattcca gcaatgcatc tttaccgcgc cttccatcat tcttaatgga 2641 tgctttaatt tcatacattc cgtcaaagtg tgcattgaat atagactccc aaaagacgta 2701 atctctctca ttttctatgt aaatcaagcc cttaccatta aaattgtagt ttgttacata 2761 ttttgggttg gtaaagtatg atgtgaagtt gttatccatt ttacttctcg gctttagtaa 2821 ttatagaatc aatctctttg tatgcaccca tccacccgtc cattactatt ccagggctgt 2881 gggttactaa tattatttgg caatcatctc ttattttttt tattgatgaa attagtattt 2941 cttgccatga aagatgtaga gatatctcag gttcatccag aagtattatt tggttttctc 3001 tctcagaatt aaagacccta agaaatgtat aaatcagctg tctctctcca gatgataatt 3061 tttctatttc tatagttgtt tttttatctt ctagaaaaac tattaaatca tcctctatta 3121 ccacctcttt tttcgtgtct ttaaaaaaac catttaaaac atcaagtaat gttttctttt 3181 cttcgctgct ccttgagccg cttgctattt tttttaatgc ggcatccttc tcctctttta 3241 tttcaaagtc taataccatc actttttcgc ctgaactttt ctttatttca tttgttgagt 3301 tggcactcat gttaatggtt gatatgtaag ttgtattgat tttatctttt tcttcttgct 3361 ttcctttctc tttttccccc atctcaacga aatatccttt tggagcgtca gtgtctttgg 3421 aagatagctt ttccaaaatc aactccattt ctgatttaat cttctcctct tgctctttgt 3481 tttttatttt tgcaagcttt tttatttctt ttttattttc agacaggcct ttaagcacct 3541 gggatgctat tatttttaaa aactcacttg aagatgggtc gtttcttctt gatatcattc 3601 gtttatcatt taagtaaatg ctggcctttt tgcaataatt tacttctgtg gactcttctt 3661 tattcagtag gctgtgaata atattcaata ttacagactt gcctttccca ttcttcccca 3721 ctaatacatt aacatcgtcc aaaatccatt caacattatg ttcatcgaag aggctctcta 3781 tacttaattt ttttattttt acgctcatta atctaccgac ctgataatcc attatgtttg 3841 atgagtaaca ctgtagcttg attctcgctt caacttaagc ataatgaaga agttgaaaaa 3901 aaaaaccacc gctaccaacg gtggtttttc taaggttctc tgagctacca actctttgaa 3961 ccatggtagc agggtgtaca agaccgctga aaccaaattc tgtcctttca gtttagccgt 4021 agttgggctg agaattcaag aactctgcat cagtaatctc ttgtacaccc tcttaccaat 4081 ggccgcagcc agtggcgttt tgttgtgtct ttccgggttg gactcaagtc gatagttacc 4141 ggataagacg ctgcggtcgg actgaacggg gggttcgtgc atacagtcca gcttggagcg 4201 aactgccttc ccggaaccga gtgtcaggcg tggaatgaga aaccgcggcc ataacagcgg 4261 agtgacaccg gtaaaccgaa aggcaggaac aggagagcgc acgagggagc caccaggggg 4321 aaacgcctgg tatctttaag tcctgtcggg tttcgccacc actgatttga gcgtcagatt 4381 tcgtgatgct tgtcaggggg gcggagccta tggaaaaacg gctttgccgt ggccttatcg 4441 cttccctgct aagtttcttc ctggcatctt ccaggatatt tccgccccgc cagtaagccg 4501 gtaccgctcg ccgcagccga acgaccgagc gcagcgagtc agtgagcgag gaagcggaat 4561 atatcctgta tcgcatattc tgctgacgcg cctgtgccgc cttttttctc ctgtcacatg 4621 aagcacttca ctgatttccg catccatgcc aacatagtaa gccagtatac actccgctat 4681 cgctacgtga ctggttcagg gcttcgcccc gaaaccccct gacgcgccct gacgggcttg 4741 tctgctcccg gcatccgctc acaggcaagc tgtgaccgtc tccgggagct acatgtgtta 4801 catgttttca ccgtcatccc cgaagcgtga gaggcagctg cggtaaagct catcggcgtg 4861 gtcgtgaagc gattcacata tatctgcctg ttcgtccgcg tccagctcgt tgagtttctc 4921 cagaagcgtt aatgtctggc ttctgataaa gcgggccatg ttaagggcgg ttttttcctg 4981 tttagtcact gatgcctccg tgtaaggggg atttctgttc atgagggtaa tgataccgat 5041 gaaacgagag aggatgctca cgatacgggt tactgatgat gaacatgccc ggttactgga 5101 acgctgtgag ggtaaacaac tggcggtatg gatgcggcgg gtctgcctgg gtgagccggt 5161 tgcccgctcc gggaggctgc cgacactggc accgccgtta ctgcgtcagc tggctgccat 5221 cgggaataac ctgaatcaga cagcgaggaa ggtgaacagc gggcagtggt cttccggcga 5281 ccgggttcag gtggtggccg cactgatggc catcgagaga gagttgcgca gcttacggca 5341 ggtcgtcagg gaacagggag cgcggg //