LOCUS NC_010487 3565 bp DNA circular BCT 01-OCT-2008 DEFINITION Escherichia coli SMS-3-5 plasmid pSMS35_3, complete sequence. ACCESSION NC_010487 VERSION NC_010487.1 GI:170650756 DBLINK Project:19469 KEYWORDS . SOURCE Escherichia coli SMS-3-5 ORGANISM Escherichia coli SMS-3-5 Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia. REFERENCE 1 (bases 1 to 3565) AUTHORS Fricke,W.F., Wright,M.S., Lindell,A.H., Harkins,D.M., Baker-Austin,C., Ravel,J. and Stepanauskas,R. TITLE Insights into the environmental resistance gene pool from the genome sequence of the multidrug-resistant environmental isolate E. coli SMS-3-5 JOURNAL J. Bacteriol. (2008) In press PUBMED 18708504 REMARK Publication Status: Available-Online prior to print REFERENCE 2 (bases 1 to 3565) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (21-MAR-2008) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 3565) AUTHORS Fricke,W.F., Wright,M.S., Lindell,A.H., Harkins,D.M., Baker-Austin,C., Ravel,J. and Stepanauskas,R. TITLE Direct Submission JOURNAL Submitted (14-MAR-2008) J. Craig Venter Institute, 9712 Medical Center Dr, Rockville, MD 20850, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000974. COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..3565 /organism="Escherichia coli SMS-3-5" /mol_type="genomic DNA" /strain="SMS-3-5" /db_xref="taxon:439855" /plasmid="pSMS35_3" gene 49..711 /locus_tag="EcSMS35_D0001" /db_xref="GeneID:6106618" CDS 49..711 /locus_tag="EcSMS35_D0001" /note="identified by Glimmer3; putative" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001739887.1" /db_xref="GI:170650758" /db_xref="GeneID:6106618" /translation="MENNSPDIDIIELFLFLKKKIVSIILFVVLSLILSSIFLLINKN KINIKYELNMIANSPSMIINCGSDFYCKANIIQSIINNKSKSITSNIDERGKKIILSW AGDDRYKPLVTAEVNAIHKAIDDWYIQDYKTYKSIVNNQDSNYINGTETYAKVALLTK INTAGEKNFISINDEIVNKKYKPALIMALTLIIAVIFSFSYHIIKRSILEYKNKLNRS FY" gene 1078..1473 /locus_tag="EcSMS35_D0002" /note="IS1 transposase orfB, degenerate; this region contains one or more premature stops and/or frameshifts which are not the result of sequencing error" /pseudo /db_xref="GeneID:6106620" gene complement(1627..2223) /locus_tag="EcSMS35_D0003" /db_xref="GeneID:6106619" CDS complement(1627..2223) /locus_tag="EcSMS35_D0003" /note="identified by Glimmer3; putative" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001739888.1" /db_xref="GI:170650759" /db_xref="GeneID:6106619" /translation="MAGDLRRLRGDRDKKSVPHCIVHACMNGLFFLTTELHCSFSSYI TFTTLLHHFCIIPSAYTSLLQHFCITFTSLLHHSFSSYVTFTSVPSSVPFVHPPPFLN VLKTVFPAVPATPHGHAINCVPVHRFRIKRTSETGLTPAEWREFPRYALACILMHAVK TEPARFWRVFGWFVACFTGFPSETPSAPLRRCGQRMLW" gene complement(2633..2842) /locus_tag="EcSMS35_D0004" /db_xref="GeneID:6106621" CDS complement(2633..2842) /locus_tag="EcSMS35_D0004" /note="identified by Glimmer3; putative" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001739889.1" /db_xref="GI:170650757" /db_xref="GeneID:6106621" /translation="MSVRFRDACQGGGAYGKTPRRGVAFSLLSLAFVMLTVTLSAYLP SARRRLMTERSERMSEEAENHQNVQ" ORIGIN 1 atttatttat ttaagctata atttaataac tattgttggt atataaaaat ggaaaacaat 61 tcacctgata ttgatatcat cgagttattt ctttttctta agaaaaaaat cgtgagtatt 121 attttgtttg ttgttttatc attgatttta tcatctattt tcttgctgat aaacaaaaac 181 aaaataaata taaagtacga attaaacatg atcgctaatt cgccaagcat gattattaac 241 tgtgggtctg acttttattg taaagcgaat atcatacaat caatcataaa caataaaagc 301 aagtctataa catcaaatat agatgaaaga ggaaaaaaaa taatcctgtc atgggctggt 361 gatgaccgtt acaaacccct ggttaccgct gaagtaaacg ctatccataa agctattgat 421 gactggtaca tccaagatta taaaacttat aaaagcatag ttaacaacca ggacagcaac 481 tatataaatg gcactgaaac atatgcaaaa gttgcattat taacaaaaat aaacactgcc 541 ggagaaaaaa acttcatttc aataaatgat gaaatagtga ataaaaagta taaaccagct 601 ttaattatgg ctctaacgtt aattatagcc gttatctttt ccttctcgta tcatataata 661 aaaagatcta tacttgaata taaaaataag ttaaacaggt ctttttatta gcctgtaacg 721 attaataacc ttattctagc aacatccgtt acacgccaga tgcagaaaag cccgctaata 781 gcgggcctcc cgataaacct caagtgaata agggcagtca gttctatttc ttacccttcc 841 attgcctaac tgattctccg tggcactggg ccaactgcag cagtttttat tcccatgagg 901 aatccgattg gtcacctcgc gatctccatt ttttaagata cacacataat ttcattagac 961 catctacagc tgactgatgc cataactcac ctttagcatg aagattctag gtgatgactc 1021 taattagttg aatctaatgt ataatacagg ctttcttcgc ctgttgccca tgctgatatg 1081 gcgcttatct gcgagcttga tgagcaatgg agctacattg gcagtaaagc ccggcaacac 1141 tggctctggt acgcgtacaa caccaaaaca ggcggtgtat tggcctacac gtttggttcc 1201 cgaaccgatt aaacgtgtcg gaagctactg gcactgctta cacccttcaa catcggcatg 1261 ctcaccagcg atgacttggg cagctatggc cgggtggtgc cgaagaataa gcatctgacc 1321 ggcaaaatat tcacccaacg cattgagcgt aataatctga cgctacgcac ccgcattaag 1381 cggttggctc gtaaaacaat ctgcttctca cgctcagttg agatccacga aaaagtgatc 1441 ggagcggtta tcgaaaaaca catgttctac taattggatg cactatcaga ttctgaaccg 1501 tgggtatata agtctgcatt tcagcttcat caatcccgtt ttttttgctg aatccattta 1561 ccaatatcct gtccatacgt tactaaagaa aataatatat gcggagtgag tcatcatgcg 1621 cctaatttac cataacatcc gttgcccgca ccgcctgaga ggcgctgagg gcgtttctga 1681 cgggaaaccg gtaaaacagg caacaaacca cccgaaaacc cgccagaaac gcgcaggctc 1741 tgtttttacg gcatgcatga gtatgcacgc aagtgcatag cgcggaaatt cacgccattc 1801 agccggggta agtcctgttt ccgatgttct ttttatccga aaacggtgaa cggggacgca 1861 atttattgcg tggccgtgag gcgttgccgg cacagccgga aaaaccgttt tcagcacgtt 1921 caggaagggg ggcggatgta caaatggcac agaggatgga actgacgtaa aagtgacgta 1981 tgagctgaag gaatgatgta aaagtgatgt aaaagtgatg caaaagtgtt gtaaaagtga 2041 tgtataggct gaaggaatga tgcaaaagtg atgtaaaagt gttgtaaaag tgatgtatga 2101 actgaaggag caatgtaatt ctgtagtcag gaagaataac ccgttcatgc aggcatgaac 2161 gatacagtga ggaacgcttt ttttgtcacg atctcccctt aacctgcgta aatcacccgc 2221 catggttgat tatttttcaa cctcaaaatg gtcatacacc taacgcagct gcgattgtca 2281 tcgcaacttc atgaaaaata aataaaaaag aaaaaataaa gggattctgg gtattaccgg 2341 ggtaataata ttaagcgcca ggacaatgaa aattaaggcg atgccggtat tactccggta 2401 atacccagaa cggagccatt acgcaccgtc ctgctgctca ttcaggcgcg ctgacaggct 2461 tcggtaaagg cgttccgcat cctcatggag tttctcgcag aaatcagcct catgatccag 2521 atccagctca ttaagcctgt ccagaagaag cagggactga tcctggataa atttagccat 2581 gttaacggct gtcttttgtt gtttgttcat gaaggccccg gcgcgaaagt gcttactgta 2641 cgttctgatg gttttccgct tcctcgctca ttcgctcact ccgttcggtc atgagtctgc 2701 ggcgagcgga gggaagataa gcagataacg taacggtaag cataacgaaa gctaaggaca 2761 agagcgaaaa ggccacgccc cgccggggcg tttttccata ggctccgccc ccctgacaag 2821 catcacgaaa tctgacgctc aaatcagtgg tggcgaaacc cgacaggact ataaagatac 2881 caggcgtttc cccctgatgg ctccctcgtg cgctctcctg ttcctgcctt tcggtttacc 2941 ggtgtcactc cgctgttatg gccgcgttta tctcattcca cgcctgacac tcagttccgg 3001 gtaggcagtt cgctccaagc tggactgtat gcacgaaccc cccgttcagt ccgactgctg 3061 cgccttatcc ggtaactatc gtcttgagtc caacccggaa agacacgaca aaacgccact 3121 ggcagcagcc attggtatct ggtttacgga gcggagaggc gtgtacaagc atacacagag 3181 ttcttgaagt gttgacctga ctacggctac actggaagga cagatttggt cactgcgctc 3241 cgtttaagcc agttaccacg gttcagaaac ttgccggttt cctgaacctt cgaaaaacca 3301 ccttgccggg tggttttttc gttttcagac caagagatta cggctgtaac acaaggatct 3361 caagaagatc ttaaaatatg tggaaaggat acaggctgat aacaactctc tccatagaca 3421 tgaccgaaca aaaaacaaac aaaagaaatt gattttagga gttttctcac acctaaataa 3481 taggtaaaat gttttttatt tgattggatt ttaaaatgaa atatactaaa tcggcgaaaa 3541 tattcatcac ggctatttta atttt //