LOCUS NC_010395 6106 bp DNA circular BCT 07-MAY-2009 DEFINITION Acinetobacter baumannii SDF plasmid p1ABSDF, complete sequence. ACCESSION NC_010395 VERSION NC_010395.1 GI:169302963 DBLINK Project:13001 KEYWORDS . SOURCE Acinetobacter baumannii SDF ORGANISM Acinetobacter baumannii SDF Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter. REFERENCE 1 (bases 1 to 6106) AUTHORS Vallenet,D., Nordmann,P., Barbe,V., Poirel,L., Mangenot,S., Bataille,E., Dossat,C., Gas,S., Kreimeyer,A., Lenoble,P., Oztas,S., Poulain,J., Segurens,B., Robert,C., Abergel,C., Claverie,J.M., Raoult,D., Medigue,C., Weissenbach,J. and Cruveiller,S. TITLE Comparative analysis of Acinetobacters: three genomes for three lifestyles JOURNAL PLoS ONE 3 (3), E1805 (2008) PUBMED 18350144 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 6106) AUTHORS Genoscope -,C.E.A. TITLE Direct Submission JOURNAL Submitted (25-FEB-2008) Genoscope - Centre National de Sequencage : BP 191 91006 EVRY cedex - FRANCE (E-mail : seqref@genoscope.cns.fr - Web : www.genoscope.cns.fr) REFERENCE 3 (bases 1 to 6106) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (24-OCT-2000) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CU468231. Annotation data relative to BLAST similarities, COG assignations, enzymatic function prediction (PRIAM software), TMHMM and SignalP predictions, and synteny results (Syntonizer software) are available in BaumannoScope database via the MaGe annotation system http://www.genoscope.cns.fr/agc/mage/baumannoscope. COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..6106 /organism="Acinetobacter baumannii SDF" /mol_type="genomic DNA" /strain="SDF" /db_xref="taxon:509170" /plasmid="p1ABSDF" gene 469..1413 /locus_tag="p1ABSDF0001" /db_xref="GeneID:5961960" CDS 469..1413 /locus_tag="p1ABSDF0001" /function="2.1.1 : DNA replication" /inference="ab initio prediction:AMIGene:2.0" /note="Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pf : putative factor" /codon_start=1 /transl_table=11 /product="putative replication protein" /protein_id="YP_001700720.1" /db_xref="GI:169302964" /db_xref="GeneID:5961960" /translation="MKKICVLMKKELVVKDNALINASYNLDLSEQRLILLAILEARQS NTPNDKDLTIHAESYINHFNVHRNTAYKVLKDACKSLFDRRFSYQKLTQKGNIENVIS RWVQRISYVENEALVRIKFSDDVVPLITNLEKHFTSYELEQVSSLTSVYAIRLYELLI AWRSTGKVILVELEELRLKLGIESHEYKRMGQFKEKVLHLAIDQINKYTDIKAEYEQH KRGRSIIGFSFKFKQKQQPQKADSKRAPNTPDFFVKMTDAQRHLFANKMSEMPEMSKY SQGTESYQQFAIRIADMLLEPEKFRELYPILEKAGFKG" gene complement(1403..1702) /locus_tag="p1ABSDF0002" /db_xref="GeneID:5961965" CDS complement(1403..1702) /locus_tag="p1ABSDF0002" /function="2.1.2 : DNA restriction/modification" /inference="ab initio prediction:AMIGene:2.0" /note="Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pf : putative factor" /codon_start=1 /transl_table=11 /product="putative mobilization protein (mobS-like)" /protein_id="YP_001700721.1" /db_xref="GI:169302965" /db_xref="GeneID:5961965" /translation="MVFYIPKLDVMTKSTENIEKKIEAQLEKIKQLKAQKQAIEARER TKQKEQERKDDTRRKILLGSYLIKKMNANEANREKILAEFNEYLTDERDRKLFNL" gene complement(1979..2683) /locus_tag="p1ABSDF0003" /db_xref="GeneID:5961962" CDS complement(1979..2683) /locus_tag="p1ABSDF0003" /inference="ab initio prediction:AMIGene:2.0" /note="Evidence 5 : No homology to any previously reported sequences" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001700722.1" /db_xref="GI:169302966" /db_xref="GeneID:5961962" /translation="MKDFLFLFAFLLAIGKPVTSHADTTYETFDVHFVILTSNPSAQL VATLNQMQEEVNILNNYFVKEDRSPVVKFRFKSVSFYNDVKNSTCSFVSTVNSATPYD SDGWATLFNSCNDPKVRDKNALNFYVYDGYSEANGFNEADSHGKRNSNRPYVMLDWQR INHNTQSPEVHEMGHAFGLEHVCAPGATYNTSTNIMTTVCTGSSGGKRDIGFNAAQVN TIMYYVPLIKAKLSKL" gene 2833..3057 /locus_tag="p1ABSDF0004" /db_xref="GeneID:5961958" CDS 2833..3057 /locus_tag="p1ABSDF0004" /inference="ab initio prediction:AMIGene:2.0" /note="Evidence 5 : No homology to any previously reported sequences" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001700723.1" /db_xref="GI:169302967" /db_xref="GeneID:5961958" /translation="MYSAIFIGLVVLVVMFLHFFVPSWDEIKQRRELAERYNMEIQSC LVDGVSKPCVRIMRNQCNYDGGDLCVIDPK" gene complement(3142..3564) /locus_tag="p1ABSDF0005" /db_xref="GeneID:5961961" CDS complement(3142..3564) /locus_tag="p1ABSDF0005" /inference="ab initio prediction:AMIGene:2.0" /note="Evidence 5 : No homology to any previously reported sequences" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001700724.1" /db_xref="GI:169302968" /db_xref="GeneID:5961961" /translation="MNKLLFFIHTKPLVFIGISSLFLFFLLYLIQYIYISLNLKEICK IIFNDEKHFRLPLEPFNCFFISVLPIVFWRETLHLKYGTSFKKMYGKEFYYPIRKNQL KKLLENFPLFFYVQYVIYLSGIFFLIFGGLAYIIDKNF" gene complement(3573..4970) /locus_tag="p1ABSDF0006" /db_xref="GeneID:5961964" CDS complement(3573..4970) /locus_tag="p1ABSDF0006" /inference="ab initio prediction:AMIGene:2.0" /note="Evidence 5 : No homology to any previously reported sequences" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001700725.1" /db_xref="GI:169302969" /db_xref="GeneID:5961964" /translation="MHYSRLKLTVQTPLKLKDLTYKFVVTNNSTKKKTEFEGRFDDQG LTGWTEIYNLNTSLIYEVYLRGEILQKIAVKAYPNKKTHSVFTIKVTSEITKNVKENI KEIYLNDGEVAWYLIKKTETMLDWSKRVFKKPLNVSDWDTLKANNPHIPNMAPIRLLS PGMVVVLSNSTTAKELPRYKKEAQEAQKRLEEMKKDKDFDAEFFAQNYEFFYDALNDS RTEITNENIFTNNDHPLIYQLDGSENESGVAWGSIGKGGIDATLAFHEGTVTRMNQIH GELALKMAEERAKGSGLANPKNFKAFRQKYKDLYKALDHEYSKGVFKWDRSIKTNNMR RIINQSSLARGVTYKGGMKEYVEKMGELGKMSKVIKGGGYLFLALDIYNASDAIANAK PEEKAKTAVVETSKIAGGLAGGAVGAFIVLTVATGGTSLIVLGVAAGASALVGWAGGE VGGYLGKEGYELISK" gene complement(4980..5345) /locus_tag="p1ABSDF0007" /db_xref="GeneID:5961963" CDS complement(4980..5345) /locus_tag="p1ABSDF0007" /inference="ab initio prediction:AMIGene:2.0" /note="Evidence 5 : No homology to any previously reported sequences" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001700726.1" /db_xref="GI:169302970" /db_xref="GeneID:5961963" /translation="MAGGSQIIISSDGITIKTPNEFKVFAGQHQFKSGAKVNATLPSL PDAENPYILQYLVKNKDNLAVSNKPYILMDEDGNVQRGLTTDEGFIKLKTTPSAQTVV TRVMMNEIEEANEEQTGEE" gene 5403..6071 /locus_tag="p1ABSDF0008" /db_xref="GeneID:5961959" CDS 5403..6071 /locus_tag="p1ABSDF0008" /inference="ab initio prediction:AMIGene:2.0" /note="Evidence 5 : No homology to any previously reported sequences" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001700727.1" /db_xref="GI:169302971" /db_xref="GeneID:5961959" /translation="MNMTFIVAVQLKDSIVVAVDNKYLTLKDKEKDHFEEHFSSKLYA WHSGIITGTGEHYVIDKAVRLFINSADADIEKLPLCLNISRQIREMEVGQHEQIQSSK LLYSQYSENGAKLFAIEPTEETGKYQRTEFKENDLIIWLFNPNIQSISGNLKTLYSNP RPKVSFDRIEDWLDYYISAIAEIYEKQSCIDSWMSGSFDIFFQTEGEYFYKHIQNNPT VHLE" ORIGIN 1 acagtatcaa aatttccacc ccgccttttc cctgattaca aagtttcctt ttacacctta 61 acgagattaa ccgagcaaag cgacggtata acctttgcga aatgaccgag cgtaagcgag 121 aaaaaataca tgagcgaagc gaattcatag ttgctttttc ttttggattt cccaactaaa 181 attaaccaaa aactgcccct cgaatcgagc aaagcgagat tcaatagagt acgaacaaag 241 tgagtaccaa gggcggtttt aagcactccc cctattttta atatttttta tttttttatt 301 ttttagtgct cataatacta tgataaatat ataaaaaaat atcaataagt acacctttat 361 cttgcaataa gtacaccttt atcttgcaat aagtacacct ttatcttgca ataagtacac 421 ctttatcttg taaaatgaca cttaattaaa taaagtgtac ttataacctt gaaaaaaata 481 tgtgtactta tgaagaagga acttgttgtc aaagacaatg cactaataaa tgccagttat 541 aatttagacc tttcagaaca acgtctaata ttgttagcaa tccttgaagc tagacaatca 601 aacacaccca atgataaaga tttaacaatt catgctgaaa gctatatcaa ccattttaac 661 gttcatagaa atacagccta taaagtcctt aaagatgcat gtaagagtct atttgatcgt 721 agattcagct atcaaaaact aactcagaag ggcaacattg aaaatgtaat aagccgatgg 781 gtacaacgca tatcttatgt tgagaatgaa gctcttgttc gtattaagtt ttctgatgat 841 gttgtaccgt tgattacaaa cttagaaaaa cacttcacca gttatgaatt agaacaagtc 901 agtagtttaa ccagtgttta cgctatacgc ttatatgaat tgcttattgc atggcgtagt 961 actggtaaag tcattttggt agagctagaa gaacttagat taaaactagg tatagaatcc 1021 catgaatata agagaatggg gcaatttaaa gaaaaagttt tacaccttgc tattgatcaa 1081 ataaacaaat acaccgatat aaaagcagag tatgaacaac acaaacgtgg ccgttcgatt 1141 attggctttt catttaagtt taaacagaaa caacaacccc aaaaagcaga ttccaagcga 1201 gcccctaaca ccccagactt ctttgtcaaa atgaccgatg cacaacgcca tctattcgcc 1261 aataaaatgt ctgagatgcc tgaaatgagc aaatattcac aaggcacaga aagctatcaa 1321 cagtttgcta tccgtatcgc tgacatgctt ttagagcctg aaaagtttag agagctttat 1381 ccaatcttag aaaaagcagg gtttaaaggt taaagagctt ccgatctcgt tcgtctgtta 1441 ggtactcatt gaattcagcc agtatttttt ctctattggc ttcattggca ttcatctttt 1501 taatcaaata agaaccgagc aaaattttac gtcgggtgtc atctttgcgt tcctgctctt 1561 tctgcttggt tctttctctg gcttcaattg cctgtttctg tgcttttaac tgcttaattt 1621 tttctaactg cgcttcaatt ttcttttcaa tattttctgt agatttcgtc ataacgtcca 1681 atttaggaat gtagaaaacc actcaagcat aaaactccat gaactagagt tcaagcgggc 1741 tatatgctat cgtgtttttc atgaaatgcg cacttacgac ttggatttca tccaagtcaa 1801 agttgcgtaa ggggaaaccc cttaacccca aaatgggctt gtgaaaagtt tggggtgttt 1861 atttcaaata gccactctgg aggcattggt ctaactggaa catgaaagcc gacttcattt 1921 ttcatatttc acccataaaa aaatccccat ataacgggga ttctaatcaa gaaaaaaatt 1981 aaagcttcga taacttcgct tttattaatg gcacgtagta cataattgta ttaacttgcg 2041 ctgcattaaa tcctatatcc ctcttgccac cagatgatcc agtgcaaaca gtagtcataa 2101 tatttgtaga agtattatag gtagccccgg gagcacatac atgttccaaa ccaaaagcat 2161 gtcccatttc atgcacttca ggtgattgag tattgtgatt aattctttgc cagtccaaca 2221 ttacatatgg tcgattagag tttctctttc catgactatc tgcttcattg aagccatttg 2281 cttcagaata accatcataa acataaaaat ttaaagcatt tttatctcta actttaggat 2341 cattgcaact attaaacaat gttgcccacc catcagaatc atatggtgta gcagaattaa 2401 ctgttgaaac aaatgaacat gttgaatttt ttacatcatt ataaaaagat acacttttga 2461 agcgaaactt tactacagga gatcgatctt ctttgacaaa gtaattattt aaaatattaa 2521 cttcttcttg catttgattt aatgttgcga ccagttgggc cgagggatta gaagtaagaa 2581 taacaaaatg tacatcaaaa gtttcgtaag ttgtatcagc atgtgaggta actggtttac 2641 cgatagccaa taaaaaagca aacaaaaaca aaaagtcctt catttcaatt taaccttaaa 2701 ttcaaattaa tataaggtta acgatatata aaagcagatt ataaaaaagc aaaaaaaata 2761 gatttccact tatccatata gtccagccta atataattaa agactcaacc atactaaatt 2821 cacgttattt taatgtattc cgctattttt attggcttag tggtattggt ggtgatgttc 2881 ttacacttct ttgtacccag ttgggatgaa attaaacaac gtagagaatt ggctgaacgc 2941 tacaatatgg aaatacaaag ctgtcttgtt gatggcgtga gtaaaccttg tgtccgcatc 3001 atgcgaaatc agtgcaacta tgatggtgga gatttgtgtg tgattgatcc taaatagttt 3061 agggggatgt acttttcaag ataaaagggt aaatgaccta taaagagttg taatcctgag 3121 tttcaagtgt aatattttta cttaaaaatt tttatctata atataagcaa gacctccgaa 3181 tataaggaaa aaaattcctg ataggtaaat tacatattga acataaaaaa ataatggaaa 3241 gttttccaat agttttttta gttgattttt tcttatagga taataaaact cttttccata 3301 catcttttta aaagaggtgc cgtattttaa atgtagtgtt tcacgccaaa aaacaatagg 3361 taaaacacta ataaaaaaac aattaaatgg ctctagtggc aacctaaagt gtttttcatc 3421 attaaaaatg attttacata tctcttttaa atttaaagat atataaatat attgaattaa 3481 ataaagtaaa aaaaatagaa atagacttga aataccaata aacaccaaag gcttagtatg 3541 aataaaaaat aataatttat tcatagtgtt ttttacttgc tgataagttc ataaccctct 3601 ttccctaagt agccgccaac ttctccccct gcccacccaa ctaaagcaga agcccctgca 3661 gcgacaccaa gtactatgag tgaggttcct cctgttgcca cagtaagaac aataaatgct 3721 ccaactgctc caccagccaa accacctgca atcttagaag tttccactac ggctgttttt 3781 gctttttctt ctggctttgc attagcaatc gcatcactag cattataaat atctaaggct 3841 aaaaataaat atccaccacc ttttataact ttactcattt ttccgagttc acccattttt 3901 tctacatact ctttcatccc tcctttgtaa gtcactcctc tagctaatga agattgatta 3961 atgattcttc tcatattgtt ggttttaata gacctatccc atttaaaaac accttttgaa 4021 tattcgtggt ctaatgcttt gtataaatct ttatattttt gtcgaaaagc cttaaagttt 4081 ttaggattgg cgagacctga acctttagcc ctctcctcag ccatcttcaa agctagttca 4141 ccatgaattt gattcattct tgtaacggtt ccctcatgaa atgctagggt tgcatcaatc 4201 cctcctttgc caatagatcc ccaagctacc ccactttcat tttctgaacc atcaagctga 4261 taaatcaagg gatgatcatt attcgtaaat atattttcat tggtaatttc agttcgactg 4321 tcattcaacg catcataaaa aaactcatag ttttgagcga agaattctgc atcaaagtcc 4381 ttatccttct tcatttcttc taatcgtttt tgggcttctt gagcttcttt tttataccgt 4441 ggtagttctt ttgctgttgt cgagtttgaa agaacaacaa ccattccagg gcttagtaat 4501 ctaattggtg ccatattcgg tatatgaggg ttattggctt tcagcgtatc ccagtcagaa 4561 acattgagtg gttttttaaa gactctttta gaccagtcta gcattgtttc tgttttctta 4621 attaaatacc acgccacctc accatcattt aaataaattt ctttaatatt ttcttttaca 4681 tttttggtaa tttcagatgt tactttaatg gtgaaaacac tatgcgtttt cttattggga 4741 taagctttta cagcaatctt ttgaagaatt tcaccccgta aatagacctc ataaattagg 4801 ctagtattta agttgtatat ttcagtccat cccgttaaac cttgatcatc gaaacgtcct 4861 tcgaactctg tttttttctt agtagaatta ttggtcacaa caaatttata agttaaatct 4921 tttaatttca aaggtgtttg tacggtaagt tttaagcgac tgtaatgcat attttaaacc 4981 tattcttcgc ctgtctgttc ttcgttggct tcttcaatct cattcatcat cacccttgtg 5041 acaactgttt gagcggatgg agttgtttta agtttgataa agccttcatc agtggttaaa 5101 ccacgctgaa cattaccgtc ttcatccatt aaaatataag gcttatttga tacagctaaa 5161 ttatctttat ttttcacaag atattgtaaa atatatgggt tttctgcatc gggtagtgat 5221 ggcaaggtgg catttacttt agcaccgctt ttaaactgat gttgcccagc gaaaacttta 5281 aattcattgg gtgtttttat ggttatacca tcagaagaaa tgataatttg tgaaccgcca 5341 gccatgacta taccaattat aattttatca ataagctata cttaacatac aattcacgtt 5401 ctatgaatat gactttcatt gtcgctgttc agttgaaaga tagtattgtc gttgcggtag 5461 acaacaaata tttgaccctt aaagacaaag agaaagacca ctttgaagaa cactttagtt 5521 ctaaattata cgcttggcac agtggaatta tcacaggaac aggtgaacac tatgttattg 5581 acaaagcggt acgccttttt atcaatagtg ccgatgcaga cattgaaaaa ctaccgcttt 5641 gcttaaacat atcaagacag attagagaaa tggaagtcgg acaacatgaa caaattcagt 5701 cctcaaaact tttgtattca caatatagtg aaaacggagc aaaactattt gctatagaac 5761 cgacagaaga aacgggaaaa tatcaaagaa cagaatttaa agaaaacgat ctcatcattt 5821 ggctattcaa ccccaatatt caaagcattt caggaaacct aaagacgcta tattctaatc 5881 cacgacccaa agtatccttt gatcgaattg aagactggct tgactactac atttcagcca 5941 ttgccgagat ttatgaaaaa caaagttgta tagactcatg gatgagcggt agctttgata 6001 tattttttca aacggaaggc gaatatttct ataaacacat tcaaaacaac ccaacggtcc 6061 atttggaata gacacaagca ccgagcgagt ggctacgagc gattga //