LOCUS NC_009791 5033 bp DNA circular BCT 06-JAN-2010 DEFINITION Escherichia coli E24377A plasmid pETEC_5, complete sequence. ACCESSION NC_009791 VERSION NC_009791.1 GI:157149574 DBLINK Project:13960 KEYWORDS . SOURCE Escherichia coli E24377A ORGANISM Escherichia coli E24377A Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia. REFERENCE 1 (bases 1 to 5033) AUTHORS Rasko,D.A., Rosovitz,M.J., Myers,G.S., Mongodin,E.F., Fricke,W.F., Gajer,P., Crabtree,J., Sebaihia,M., Thomson,N.R., Chaudhuri,R., Henderson,I.R., Sperandio,V. and Ravel,J. TITLE The pangenome structure of Escherichia coli: comparative genomic analysis of E. coli commensal and pathogenic isolates JOURNAL J. Bacteriol. 190 (20), 6881-6893 (2008) PUBMED 18676672 REFERENCE 2 (bases 1 to 5033) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (13-SEP-2007) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 5033) AUTHORS Rasko,D.A., Rosovitz,M.J., Brinkley,C., Myers,G.S.A., Seshadri,R., Cer,R.Z., Jiang,L. and Ravel,J. TITLE Direct Submission JOURNAL Submitted (13-AUG-2007) The Institute for Genomic Research, 9712 Medical Center Dr., Rockville, MD 20850, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000801. Source DNA and bacteria available from Jacques Ravel (jravel@tigr.org). COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..5033 /organism="Escherichia coli E24377A" /mol_type="genomic DNA" /strain="E24377A" /db_xref="taxon:331111" /plasmid="pETEC_5" gene complement(1408..1503) /locus_tag="EcE24377A_A0001" /db_xref="GeneID:5585895" CDS complement(1408..1503) /locus_tag="EcE24377A_A0001" /note="identified by glimmer; putative" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001451613.1" /db_xref="GI:157149576" /db_xref="GeneID:5585895" /translation="MFQVQKRRPIGRRFCTCGKSFFFNSAFLFGF" gene 2674..2895 /locus_tag="EcE24377A_A0002" /db_xref="GeneID:5585894" CDS 2674..2895 /locus_tag="EcE24377A_A0002" /note="identified by glimmer; putative" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001451614.1" /db_xref="GI:157149577" /db_xref="GeneID:5585894" /translation="MQPCESRRNCQPETAETDFFHAFGSEEDGDRSGKTEVQGNERDL AIEAKHSNKRHTRIAPVCVLTRSCVFSKV" gene complement(2984..4549) /locus_tag="EcE24377A_A0003" /db_xref="GeneID:5585896" CDS complement(2984..4549) /locus_tag="EcE24377A_A0003" /note="identified by match to protein family HMM PF03432" /codon_start=1 /transl_table=11 /product="mobilization protein MobA" /protein_id="YP_001451615.1" /db_xref="GI:157149575" /db_xref="GeneID:5585896" /translation="MERGMIVKFHARGKGGGSGPVDYLLGRERNREGATVLQGNPEEV RELIDATPFAKKYTSGVLSFAEKELPPGGREKVMASFERVLMPGLEKNQYSILWVEHQ DKGRLELNFVIPNMELQSGKRLQPYYDRADRPRIDAWQTLVNHHYGLHDPNAPENRRT LTLPDNLPETKQALAESVTRGIDALYHVGEIKGRQDVIQALTEAGLEVVRMTRSSISI ADPNGGKNIRLKGAFYEQSFTDGRGVREKAERESRIYRDNAERRVQQARKICKQGCDL KRDENQRRYSPVHNVDRGIAGKTPGRGERGDDAAQEGRVKAGREYGHDVTGDGPFPVY REWRDALVSWRADTGEPGRNQDTGRNIAETEREDMGRGVCAGREKEISGHPAGEIGNG DSLSGEGLGTTDGVTQSDGAGKTFAERLRATATGLYAAAERMGERLRGIAENVFAYAT GQRDAERAGHAVESAGAALERADRTLEPVIQREQEIRDERLIQEREHELSLERERQLE IQERTLDGPSLGW" ORIGIN 1 cttcacgacc acgccgatga gctttaccgc agctgcctcg cacgtttcgg ggatgacggt 61 gaaaacctct gacacatgca gctcccggag acggtcacag cttgtctgtg agcggatgcc 121 gggagcagac aagcccgtca gggcgcgtca gcgggtttta gcgggtgtcg gggcgcagcc 181 atgacccagt cacgtagcga tagcgaagtg tatactggct tagatatgtg gcatcagtgc 241 agattataag aaaagagcac catatgcggt gtgaaatacc gcacagatgc gtaaggagaa 301 aatgccgcat caggcgctct tccgcttcct cgctcactga ctcgctacgc tcggtcgttc 361 ggctgcggcg agcggtatca gctcactcaa agacggtaat gcggttatcc acagaatcag 421 gggataacgc caaaagaaac atgtgagcaa aaaacaagaa ccaagaaaag gccacgccgc 481 tggcgttttt ccataggctc cgcccccctg acgagcatca caaaaattga cgctcaagtc 541 agaggtggcg aaacccgaca ggacttaaag ataccaggcg tttccccctg gaagctccct 601 cgtgcgctct cctgttccga ccctgccgtt taccgaatac ctgtccgcct ttctcccttc 661 gggaagcgtg gcgctttctc atagctcacg ctgtaggtat ctcggcccgg tgtaggtcgt 721 tcgctccaag ctgggctgta tgcacgaacc ccccgttcag cccgactgct gcgccttatc 781 cggtaactat cgtcttgagt ccaacccggt aagacacgac ttaacgccac tgtcagcagc 841 cactggtaac tgatttagag gaggagagtc ttgaagttcc taatgtgatg cggctacact 901 aaaaggacag ctttggtgac tgagctcctc taagccagtt accttcggaa gaaagagttg 961 gtagctcttg attccggcaa acgaaccacc gttggtagcg gtggtttttt tgtttacagg 1021 gagtgagatt acgacgagaa caaaaggatc acaagaagat ccactgttta ccagtgatta 1081 agcttctgca ttggcataca tgttctacac ctgaaattct atagactaga ggttcacatg 1141 acagagaaaa tccaaggaac agctagcgtt cttaatcaaa ccaaaactta tgaagagctg 1201 gttcagaaat attcaccaga aatagctaac ggcttactgg caaggtctat caacaatgct 1261 ttacctaacg caaaaataac tccaaatgac gttgctggat tctgcaaagt gacgacagct 1321 ttgcgtacag gaaaagttga tctagaaaaa acagtgaaag aagccgatgc cgatgcgaaa 1381 gccgtttcag caaatatcat tgagggtcta aaaaccaaac aaaaaagcac tgttgaaaaa 1441 gaatgatttc ccgcaggtac aaaaacgtcg ccctataggg cgacgttttt gtacctgaaa 1501 caagcaggac taccataata tggttttata cgccatgcat gaaaaagcct acatagaagc 1561 ttcgagtcaa tagctacaaa gagctcttat ttatggtggc gtattaacaa ccattccatt 1621 agtgagctac gtaaagcccg tgaactttac cattatggta gtcaaaacaa ttctctataa 1681 ttttgtagaa ctcattatca ctgagctcaa acttcctgaa aattgagtac gatacaagat 1741 cagcaagctg aatcagtctt gacgccttag agtccaaaaa taaaggcact tcagagaagt 1801 tgcgaagttt tccatactca tatccagtat ctttaaacgt acgagcaaga gattgaatac 1861 ttttttctgt tgacgactta tcaaaaatag ctacacctcg agatgtatca ccttggtgat 1921 gtaatcgact taaatacatg tcgaaacgag acgatatttg ataaaaagac tctgttatta 1981 catcctttcc atctaaggag cccttgggca caacgcatgc aaatatgcga atatcccgat 2041 gcttttgagt aaggagtgct aggcaatctt tgatcgcttg ctttctgtca ttgagagaaa 2101 actttttcca gccatctcgt ccacctctca tcggcgaacc atgaaattct ctttcataag 2161 ggtcatcact attaaatcga gccgcaattg cattcatctc tttctctatc cagtgcgttt 2221 gcttttcaaa cactgatata ccagaaagga caaaatgatt aagggtagga tctgatggtg 2281 taccagactc atcaacgtat aaaagatgca tctaagactc cttaaacgaa aaatgccgcg 2341 catttgcgcg gcattttcat gaatgaggca agccagtgcg ataaaaatca catacaccgc 2401 tatgggcagc gaactgactt aacatcaatg ataacaggca agtgcatatt tgcccaaaca 2461 atttatacac acactatagc cataagcaat aaaacaatag aaattcaaga agataacttc 2521 ttcaccgttg ttcttattta ccataacgtc gcattgtacg caccactgaa acgcgttcgg 2581 cgagatcacg gcagcagaca ggtaaaaatg gcaacaaacc acccgaaaaa ctgccgcgat 2641 cgcacccggt aaattttaac cacatgcata gctatgcagc catgtgaatc acgcaggaat 2701 tgccagccag agacagctga aacggatttt tttcatgctt tcggaagcga agaagacggg 2761 gaccggagcg ggaaaacaga agttcagggg aatgagcgcg atctggcaat agaggcaaaa 2821 cacagcaaca aaagacacac cagaatcgcg cccgtatgcg ttttaacgcg ttcctgtgtt 2881 ttcagcaagg tctgactgaa gcgcgttccc ggtgcccccg aaccaaccat tatcccaaaa 2941 aatgcaccgg aaacgcgctg acaacatttt agcctgtctc tgattaccat cccagcgaag 3001 ggccatccag tgtccgttcc tgtatttcca gctggcgctc acgctccagg gataactcat 3061 gttcgcgctc ctgtatcagc cgttcgtccc ttatctcctg ttctcgctgt ataactggct 3121 caagcgttct gtccgctcgc tcaagtgctg cacctgctga ctcaactgca tgacctgctc 3181 gttcagcatc gcgttgtcct gttgcgtaag cgaaaacatt ttctgcaatt ccacgaaggc 3241 gctctcccat tcgttcagcc gctgcatata gtcctgttgc agttgctcta aggcgttcag 3301 caaatgtctt tccagctccg tcactctgtg tcactccgtc agttgtaccc agtccttccc 3361 ctgataggga atcaccgttg ccgatttccc ctgcgggatg accagaaatt tccttctccc 3421 gtcctgcaca aactccacgc cccatgtctt cgcgttcagt ttctgcaatg tttcttcctg 3481 tatcctgatt tcttccaggt tcgcctgtat ccgcccgcca agataccaga gcgtcccgcc 3541 actcacggta aacaggaaaa ggaccatccc cagtaacatc atgcccgtat tccctgccag 3601 ctttaacacg tccttcctgt gctgcatcat cgcctctttc accccttccc ggtgtttttc 3661 cagcgatgcc tctgtcgacg ttgtgaacag ggctatagcg tctttgattt tcgtctcgtt 3721 tgaggtcaca gccttgctta cagatttttc gagcttgctg aactcgtcgt tcagcattgt 3781 ctctgtagat tcggctctct ctttcagctt tttctcgaac tccgcgcccg tctgtaaaag 3841 attgctcata aaatgctcct ttcagcctga tattcttccc gccgttcggg tctgcaatgc 3901 tgatactgct tcgcgtcatc ctgaccactt caagccccgc ctctgtgagc gcctgaatca 3961 catcctgacg gccttttatc tccccgacat gataaagagc gtctatcccc cgtgtaacgc 4021 tctcagcaag cgcctgtttc gtttccggca ggttatcagg gagagtcagc gtccggcggt 4081 tctccggggc gttggggtca tgcagcccgt aatggtgatt caccagtgtc tgccaggcat 4141 caattctcgg cctgtctgcc cggtcgtagt acggctggag gcgttttccg ctctgtagct 4201 ccatattcgg aatgacaaaa ttaagctcaa gccgcccctt gtcctggtgc tccacccaca 4261 ggatgctgta ctgatttttt tcgagaccgg gcatcagtac acgctcaaag ctcgccatca 4321 ctttttcacg ccctcccggc ggcagctcct tctccgcgaa cgacagaaca cctgacgtgt 4381 atttcttcgc aaatggcgtg gcatcgatga gttcccggac ttcttccgga ttaccctgaa 4441 gcaccgttgc cccttcccgg tttcgctccc ttcccagcag gtaatcaacc ggaccactgc 4501 caccgccttt tcccctggca tgaaacttaa ctatcatccc gcgctccatg ttccctgacg 4561 acctgccgta agctgcgcaa ctctctctcg atggccatca gtgcggccac cacctgaacc 4621 cggtcaccgg aagaccacag cccgctgttc accttacggg ctgtctgatt caggttattt 4681 ccgatggcgg ccagctgacg cagtaacggc ggtgccagtg tcggcagttt cccggaacgg 4741 gcaaccggct cccccaggca gacccgccgc atccataccg ccagttgttt accctcacag 4801 cgttcaagta acctggcatg ttcatcatca gtaacccgta tagtgagcat cctctcgcgt 4861 ttcatcggta tcattacccc atgaacagaa atccccctta cacggaggca tcagtgacta 4921 aacaggaaaa aacagctctt aacatggcgc gctttatcag aagccagaca ttaacgctgc 4981 tggaaaagct caacgaactg gacgcggatg aacaggcaga catctgtgaa tcg //