LOCUS NC_009713 3678 bp DNA circular BCT 27-JUL-2008 DEFINITION Campylobacter hominis ATCC BAA-381 plasmid pCH4, complete sequence. ACCESSION NC_009713 VERSION NC_009713.1 GI:154147860 DBLINK Project:20083 KEYWORDS . SOURCE Campylobacter hominis ATCC BAA-381 ORGANISM Campylobacter hominis ATCC BAA-381 Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter. REFERENCE 1 (bases 1 to 3678) AUTHORS Fouts,D.E., Mongodin,E.F., Puiu,D., Sebastian,Y., Miller,W.G., Mandrell,R.E. and Nelson,K.E. TITLE Complete Genome Sequence of Campylobacter hominis ATCC BAA-381, a commensal isolated from the human gastrointestinal tract JOURNAL Unpublished REFERENCE 2 (bases 1 to 3678) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (30-JUL-2007) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 3678) AUTHORS Fouts,D.E., Mongodin,E.F., Puiu,D., Sebastian,Y., Miller,W.G., Mandrell,R.E. and Nelson,K.E. TITLE Direct Submission JOURNAL Submitted (19-JUL-2007) J. Craig Venter Institute, 9712 Medical Center Drive, Rockville, MD 20850, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000775. COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..3678 /organism="Campylobacter hominis ATCC BAA-381" /mol_type="genomic DNA" /strain="ATCC BAA-381" /db_xref="ATCC:BAA-381" /db_xref="taxon:360107" /plasmid="pCH4" gene 75..251 /locus_tag="CHAB381_A0001" /db_xref="GeneID:5407962" CDS 75..251 /locus_tag="CHAB381_A0001" /note="identified by glimmer; putative" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001405618.1" /db_xref="GI:154147865" /db_xref="GeneID:5407962" /translation="MIYYPQNSILKKPQSFAELRGKYCQKGANMRKHTKHLLLKLYLN FRLFKLKVEVEIRK" gene 235..1365 /locus_tag="CHAB381_A0002" /db_xref="GeneID:5407963" CDS 235..1365 /locus_tag="CHAB381_A0002" /note="identified by match to protein family HMM PF01051" /codon_start=1 /transl_table=11 /product="putative RepE" /protein_id="YP_001405619.1" /db_xref="GI:154147864" /db_xref="GeneID:5407963" /translation="MRLGSRQERGRKSPPFGSIKQSKGDKMAKLPVYYDNKMNLLAFK NLDKVEANLFFSIVARFNDKGAEKLKLNFSEIAEFISDNKYTSKELSKLINDGVGKVV QSAIKWEMTPIKTAYFTLFNEFLVDDENKTLEASINSRFLFMLNNFKDGNFTMLELAE FSSLKSKYTQTLYRLLKQFRFTGFRSIKWAEFIEIMDIPTSYRARDIDKQILKPAIAE LTQEADIFNQNNPIFKKLIYKKIRGTGRGRPVELIEFYFMPETDEPKEQKKNEKALQY IAQDIKKEQMLKELKRSSQEPKKINPLTGQEITGLEPYRLRNMRFKNKFGEYDILKIQ NIEQEPSGKIIVTVRNVDDNHISTMKFDSLKHFENTFNLHQM" gene complement(1519..1707) /locus_tag="CHAB381_A0003" /db_xref="GeneID:5407964" CDS complement(1519..1707) /locus_tag="CHAB381_A0003" /note="identified by glimmer; putative" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001405620.1" /db_xref="GI:154147862" /db_xref="GeneID:5407964" /translation="MRVLLSKRSVRQRVTSPYDLNFSIIFAFLERFPFNIFLNLTFNL LDPFLASAWWWFAWVFRG" gene 1766..2074 /locus_tag="CHAB381_A0004" /db_xref="GeneID:5407965" CDS 1766..2074 /locus_tag="CHAB381_A0004" /note="identified by match to protein family HMM PF05713" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001405621.1" /db_xref="GI:154147861" /db_xref="GeneID:5407965" /translation="MKSYKSIRKTIRFTDDEFSTIKEKMELGNYSNFTEFALHSMINK KPSKAKSINKEYLLELNRIGNNLNQLTRKLNKGDRLNNLSLSAIIDIRDSINSLKEKI" gene 2071..3678 /locus_tag="CHAB381_A0005" /db_xref="GeneID:5407961" CDS 2071..3678 /locus_tag="CHAB381_A0005" /note="identified by match to protein family HMM PF03432" /codon_start=1 /transl_table=11 /product="mobilization protein" /protein_id="YP_001405622.1" /db_xref="GI:154147863" /db_xref="GeneID:5407961" /translation="MIVKFFNTKKGGGNSAIDYLLDKRVEQGTSRILQGDEQLTRDII KNMSQKHKTCVGVLSFEEKDIDEQLKFKLMADFEKALMTDEAQGRYNILWVEHNDKGR LELNFVIPKIDLQTKKALNPYYHNADLSRIASWQDIKNIEYNFKNPKDPSKEQTIQGS KKQVEIYKDYEKLDNFLQQEVKNGTLQSRAEIIKLLQDNGVEVTRQGKDYLSIKLPDN TKAKRFKGGIYSDEFRSIESIRTIGDEQKEREREFSQRDNTAELERLRNQFERAYNAK SKYYKREFEKRDRQHKNRYDNYRTGIDEFKANEHKADNFIDNSISSDFFSPISETSRS DIDDSVRNRIDERARQLREREQEAIRTAKRTRADYKPTQKEPIRLNEREYALLADNRK QQQEPIIDENYIREREKRKREAIKRIRELREARERQRNTELEASIKPSFERLREVREG IKQQHERHTIFADIFRQSEASFRKHITGRIQEFGRQFQRNITEFGETLREQGKRSIKS GIDEVRAFINKHKRELERVLEKGKTKA" ORIGIN 1 aagcaggtaa taaagggctt ttgagagctt atagactata aaaataaaat tgtattcttt 61 ataaggggat attattgatt tattatcccc aaaatagtat attaaaaaag ccccaaagct 121 ttgcagagct aaggggcaaa tactgtcaaa agggggctaa tatgcgaaag catactaagc 181 acctactgct gaaattatac ctaaatttta ggctttttaa gcttaaagtg gaagttgaga 241 ttaggaagta ggcaagaacg ggggcgaaag tccccgccct ttggcagtat aaagcaatca 301 aaaggggata aaatggctaa actaccagtc tattacgata ataagatgaa cctattagca 361 tttaaaaacc ttgacaaagt agaagctaat ttatttttta gcatagtggc aaggtttaat 421 gacaagggag cggaaaagct caaattaaat tttagtgaga tagcagagtt tatatcagat 481 aataaataca ctagcaaaga attatcaaaa ttaataaatg atggcgttgg taaggtagtt 541 caatcggcta taaaatggga gatgacacct ataaaaaccg cttattttac cctttttaat 601 gagttcttag ttgatgatga aaataagacc ctagaagcaa gtattaacag cagattttta 661 tttatgctaa ataattttaa agacggaaat tttacaatgc tagaattagc agagtttagc 721 agtcttaaga gtaaatacac acaaactctt tacaggcttt taaaacagtt tagatttaca 781 ggctttaggt ctataaaatg ggctgagttt atagagatta tggatatacc gacaagttac 841 cgagcaagag atatagacaa gcaaatttta aaaccagcta tcgcagagct tacacaggaa 901 gccgacattt ttaaccaaaa caacccaatt tttaaaaaat taatctataa aaaaataagg 961 ggaacaggca gggggcgacc tgttgagctt atagagtttt attttatgcc tgaaaccgac 1021 gaaccaaaag agcaaaagaa aaacgaaaaa gcacttcaat acatagcaca agacattaaa 1081 aaagaacaaa tgctaaaaga gttaaagcga agtagccaag agccaaagaa aatcaacccc 1141 ttaacaggac aagaaattac agggcttgaa ccttacaggc ttagaaatat gagatttaaa 1201 aacaaatttg gcgaatatga catactaaaa attcaaaata tcgagcaaga gccaagtgga 1261 aaaattatag taactgttag aaatgttgat gataatcata taagcacaat gaaatttgac 1321 agcctaaaac actttgaaaa cacatttaat ttacaccaaa tgtagcctaa gtagattttt 1381 atcgtctata aactctattt ttatccccta taaagtagat ttttatcccc taagtagatt 1441 tttatcccct ataaagtaga tttttatccc ctataaaaac ataaaaaagt agatttttat 1501 cccctataaa gtagattttt atcccctaaa tacccacgca aaccaccacc acgccgaagc 1561 tagaaagggg tctaaaaggt taaaagttaa atttaaaaag atgttaaaag gaaaacgctc 1621 caaaaaagca aaaattatgc taaaatttaa atcatagggc gaggttactc tttgtctgac 1681 acttcgttta gacaagagaa ctcgcaaggg gaaaattccc ctttgaaccc cttagccaat 1741 ccattgtttt ttacaggaga gtaaattgaa atcttataaa agcataagaa aaacaattcg 1801 ttttacagat gatgagtttt ctaccattaa agaaaaaatg gaattaggta attactctaa 1861 ctttacagaa tttgcacttc actcaatgat taataaaaaa ccaagtaaag ctaagtcaat 1921 aaataaagag tatttattag agcttaatag gataggcaat aatctaaatc agcttactag 1981 aaaactcaat aaaggggata gactaaataa tttaagttta tcagcgatta tcgatattag 2041 agatagcatt aactcactaa aagaaaagat atgattgtaa agttttttaa tactaaaaaa 2101 gggggtggaa atagtgctat cgattatctt ttagataaga gagtagaaca aggcacgagc 2161 aggattttac agggcgacga gcaattaaca agagatataa ttaagaatat gagccaaaag 2221 cataagactt gcgttggcgt gttaagcttt gaagagaaag acatcgacga gcagttaaaa 2281 tttaagctta tggcggactt tgaaaaagcg ttgatgaccg atgaagcaca aggcagatat 2341 aatattttgt gggtagaaca taacgacaag ggacggttag agttaaattt cgtaatccct 2401 aaaatagacc tacaaacaaa aaaggcttta aatccttact atcacaacgc agatttaagc 2461 cgtatagcat cgtggcaaga tattaaaaac atagagtata actttaaaaa tccaaaagac 2521 ccaagcaaag agcagaccat acaaggcagt aaaaagcaag tagaaattta taaggattat 2581 gagaagctag acaacttttt acagcaagaa gtaaaaaacg gcacattaca gagccgagcc 2641 gagattatta aattactaca agataacggc gtagaagtta caagacaggg caaagactat 2701 ttaagcataa aattaccaga caacaccaaa gcaaaaagat ttaaaggggg tatttatagc 2761 gatgaattcc gaagcattga aagcattaga acaatcggcg atgaacaaaa agagagagaa 2821 cgagaattta gtcaaagaga taatacggcg gaacttgaac gacttagaaa tcagtttgaa 2881 cgagcataca acgcaaaatc taaatactat aagcgagaat ttgagaaaag agaccgacag 2941 cataaaaaca gatatgacaa ttatcgcaca ggaattgatg aatttaaagc gaacgaacac 3001 aaagctgata atttcattga taattctatt tctagtgatt tttttagccc tatctctgaa 3061 acttctagga gtgatataga tgacagcgtt agaaatcgaa ttgatgaaag agctagacag 3121 cttagagaac gagaacaaga agctattaga acagctaaaa gaacaagagc agattataaa 3181 ccaactcaaa aagagccaat acgacttaac gagagagaat acgctttact tgcagacaat 3241 agaaaacagc aacaagagcc tatcatcgat gaaaactaca ttagagagcg agagaaacga 3301 aaacgagaag ctattaaacg aattagagag cttagggaag caagagagcg acaaagaaat 3361 acagagcttg aagcaagtat taaaccaagc tttgaacgat tacgagaagt tagagaaggc 3421 attaagcagc agcacgaacg acatacaatc tttgcagaca tttttcgaca atcagaagca 3481 agttttagaa aacacattac agggcgaata caagaatttg gacgacaatt tcaaaggaat 3541 attacagagt ttggagagac acttcgagaa cagggcaaac gaagtattaa aagcggtatc 3601 gatgaagtta gagcgttcat aaacaagcat aaaagagagc ttgaaagggt cttggaaaag 3661 ggaaagacaa aggcatag //