LOCUS NC_009652 4259 bp DNA circular BCT 25-JAN-2008 DEFINITION Klebsiella pneumoniae subsp. pneumoniae MGH 78578 plasmid pKPN6, complete sequence. ACCESSION NC_009652 VERSION NC_009652.1 GI:152973830 DBLINK Project:31 KEYWORDS . SOURCE Klebsiella pneumoniae subsp. pneumoniae MGH 78578 ORGANISM Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella. REFERENCE 1 (bases 1 to 4259) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (09-JUL-2007) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 2 (bases 1 to 4259) AUTHORS McClelland,M., Sanderson,E.K., Spieth,J., Clifton,W.S., Latreille,P., Sabo,A., Pepin,K., Bhonagiri,V., Porwollik,S., Ali,J. and Wilson,R.K. CONSRTM The Klebsiella pneumonia Genome Sequencing Project TITLE Direct Submission JOURNAL Submitted (06-SEP-2006) Genetics, Genome Sequencing Center, 4444 Forest Park Parkway, St. Louis, MO 63108, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000651. Coding sequences below are predicted from manually evaluated computer analysis, using similarity information and the program GeneMark (version 2.3). This sequence was finished as follows unless otherwise noted: all regions were double stranded, sequenced with an alternate chemistries or covered by high quality data (i.e., phred quality >=30);an attempt was made to resolve all sequencing problems, such as compressions and repeats; all regions were covered by sequence from more than one m13 subclone. COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..4259 /organism="Klebsiella pneumoniae subsp. pneumoniae MGH 78578" /mol_type="genomic DNA" /strain="ATCC 700721; MGH 78578" /sub_species="pneumoniae" /db_xref="ATCC:700721" /db_xref="taxon:272620" /plasmid="pKPN6" gene 167..358 /gene="rom" /locus_tag="KPN_pKPN6p09258" /db_xref="GeneID:5343358" CDS 167..358 /gene="rom" /locus_tag="KPN_pKPN6p09258" /inference="ab initio prediction:Genemark:2.0" /codon_start=1 /transl_table=11 /product="RNA one modulator-like protein" /protein_id="YP_001338869.1" /db_xref="GI:152973831" /db_xref="GeneID:5343358" /translation="MTKQQKTALNMAKFIQNQSLLLLEKLNELDLDAEADLCEKLHDD AEHLFRTLSSRLDALQDGN" gene 358..759 /gene="excl1" /locus_tag="KPN_pKPN6p09259" /db_xref="GeneID:5343359" CDS 358..759 /gene="excl1" /locus_tag="KPN_pKPN6p09259" /inference="ab initio prediction:Genemark:2.0" /codon_start=1 /transl_table=11 /product="Excl1 protein" /protein_id="YP_001338870.1" /db_xref="GI:152973832" /db_xref="GeneID:5343359" /translation="MARVSISEAARLTGKSRTTLHRLIKAGDLSTCSGERNAKMVDTS ELLRVFGPFEQPKGEHHSGQVSEQRDTASADQSEQVIRHLKQEIEHLNTLLLSKDSHI DSLKQAMLLLENHQAKLTESPAPWWKFWKKS" gene 1537..1638 /locus_tag="KPN_pKPN6p09260" /db_xref="GeneID:5343360" CDS 1537..1638 /locus_tag="KPN_pKPN6p09260" /inference="ab initio prediction:Genemark:2.0" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001338871.1" /db_xref="GI:152973833" /db_xref="GeneID:5343360" /translation="MYEYLVMVGIVSMDIAKDKSITYLVGDANGNRV" gene 1622..3046 /locus_tag="KPN_pKPN6p09261" /db_xref="GeneID:5343361" CDS 1622..3046 /locus_tag="KPN_pKPN6p09261" /inference="ab initio prediction:Genemark:2.0" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001338872.1" /db_xref="GI:152973834" /db_xref="GeneID:5343361" /translation="MEIEFENIGFIKSGKIKTNNITVIFGPNNVGKTYLSYSTYAAIS RYNDIFREKIKIPKSVSSNLVLNGTARYDITNVFTDSLVKSVNEEVSSSLPAFFKDSS GMFSKSKISVIDSYIKDRVVNSEVNVNISVSENIILNIQKKKNNTCIDFTVTSSKKNN ESGSPVIDLKEKDASNYLNILFNFFFLNEVLDSAANNAFIITSERTGISLFQKEIDGN RSNIVDSYMWSKLSTRKLLSFDDIMSQKVAKFSEPINHNINIIRDFADLKKMKHIMTA NGVRRASKERADVIKTLESLTGGRYSTSDGEAIFTVSCSDGDKVSMPLSLSSASNKAL FLLDIYVRYYMSNNSYLIIDEPELNLHPHNQIKMAELLVRLSNCGVKIIITTHSDYIV KEINNRIMASQLKDKSRLTELGYKEADLIFSSEVNGFTIGNDGAISEVEGNRYGVNAF LFDNVINDIENKADLLYTYLEEGL" gene 3048..3680 /locus_tag="KPN_pKPN6p09262" /db_xref="GeneID:5343362" CDS 3048..3680 /locus_tag="KPN_pKPN6p09262" /inference="ab initio prediction:Genemark:2.0" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001338873.1" /db_xref="GI:152973835" /db_xref="GeneID:5343362" /translation="MLERFIDVLNKDVLFDLSATPSPDSSVLVVREDGELSEIKELTI KEIPDDSIAFTLDFSSKKNSKENGALFSQLSPYFDKSNGDGVNKSCDLVLITRDGDKF TVLIFDQKSKKPDIESSFLQLENSRVFVSYVINIISLIYKDNIDEGKIIFKRVIGTTR VVKTGVNAANHEQERSRREKLRALGMNEVSIKRTASIEKGWLDYRGIVSF" ORIGIN 1 gcggcctttc cttcttcccg tcatgcggct gctcggtttt ctcggcgttt ctacgcatgc 61 tcctgccgct cgccgcagcc gaacggcagg agcgtagcga ctgagtgagc gaggaagcgg 121 aaaagagaac atccttacac tgagcactga cgctctgagg cctcttatga cgaaacaaca 181 gaaaacagcg ctgaacatgg ctaaattcat ccagaatcag tctctgctcc tgctggagaa 241 gcttaacgag cttgatcttg atgctgaggc tgacctttgt gagaaactcc acgatgatgc 301 ggagcatctt ttccgtacac tgtcctcgag actggatgca ttacaggatg gtaactgatg 361 gccagagtgt ctattagtga ggctgcccga ctgacgggta agagtagaac aacactgcac 421 aggttaatta aagcaggtga cctgtccacc tgtagcggtg aacgcaatgc aaaaatggta 481 gatacttcag agcttttacg tgtctttggt ccctttgagc aaccgaaggg tgaacaccat 541 tctggacagg tctctgaaca gcgtgataca gcctctgctg accagagtga acaggtgatt 601 cgtcatctga aacaggagat tgaacacctg aacaccttac ttttgtccaa ggattcgcac 661 attgacagcc tgaaacaggc catgctcctt cttgaaaatc accaggcaaa attaactgaa 721 tccccggcgc catggtggaa attctggaaa aaatcctgat cctgccatgc ttgagttttc 781 ctctccggcc atcccgggga gttcctgaac cttcccaaaa tcgccagatc tctgaacgct 841 cctcaccact aaaaataccc acacactacg caaaattaaa attttgcgga tttgtattta 901 atatcagtta gttactttcc tgaaatttcg ttttttaaat tttatttaca tagatccgac 961 tctatgacga ctcgtcatag agtccccggc gagtcgtcat ggagtcggta acgactcagg 1021 actataaaaa caatgagtta ataacgaccc gactctagac ccgactcccc gtttggttgt 1081 tttttagacg tggcgactct gggtacgact ctagtgaaga gtcgccggtg aatcgtgtgg 1141 tgagtcgtcc ggcgacttgc cacacgccat tgccggctgt cgatgggccc gattcctgaa 1201 ggtgttgaaa acggtttttc cggctgtgcc ggcaacgcct cacggccacg caataaattg 1261 cgtccccatt caccgttttc agtcgggttt ggtgcgggtt tcgagtcgtc tggcctaaat 1321 tcaggctgaa atctgccacc agtcagtctg gtgcataacg attcatgccc gtaaaacgcc 1381 ctggagcgat tttgaggcgt tttcaggggg taagacgtag gatttaatgg gttacgcccc 1441 agaatcgttc tgaggccgtt ttagcggtgc gtgtaatgac gcgttatggt aaatccagta 1501 gttttttgct cattcaggag tggtttttaa atcatcatgt atgaatatct tgtaatggta 1561 ggtatagtta gcatggatat tgctaaggat aaaagcataa catacttagt gggtgatgcg 1621 aatggaaata gagtttgaaa atatcggctt tataaaaagc gggaaaataa aaaccaataa 1681 cattactgtt atttttgggc caaataatgt gggtaaaaca tacctaagtt atagcacata 1741 cgctgctatt agtaggtaca atgacatatt tagagagaaa ataaaaatac caaaatcagt 1801 atctagcaac ctggttttaa acggaactgc caggtacgac atcacaaacg tttttactga 1861 ttctcttgtt aaatcagtta atgaagaggt ttcatcaagc ttacctgcat tcttcaaaga 1921 tagttcaggt atgttttcta aatcaaaaat tagtgtgatt gactcttata ttaaagatag 1981 agttgttaat tctgaagtta atgtaaatat ttctgtcagt gaaaatataa tattaaatat 2041 acaaaagaaa aaaaacaata catgtattga ttttacagtc acctcatcca aaaagaataa 2101 tgagtcaggg agtcctgtca ttgatctgaa ggaaaaagac gcttcaaatt atttaaatat 2161 tttatttaat ttctttttcc ttaatgaggt tttagactct gcagctaata acgcatttat 2221 aataacatct gagcgtactg gaatatcctt gtttcaaaag gagattgatg gtaatcgtag 2281 taatattgtt gattcttaca tgtggagtaa gttgtctacg aggaagttac tgtcttttga 2341 tgacattatg agccagaaag ttgctaaatt ctcggagcca attaatcaca atataaatat 2401 aataagagac tttgctgatc tgaaaaaaat gaagcatata atgacggcaa atggtgttag 2461 aagggcatct aaggagcgag ctgatgttat aaaaacacta gagtcactta ctggtggcag 2521 atactcaaca tctgacggtg aggctatttt tacagtttct tgcagtgatg gagataaagt 2581 gtcaatgcca ctttctctct catcagcatc taacaaagca ctatttctat tagatatata 2641 tgtaagatac tacatgtcta ataactctta cttgataatt gatgagccag agctgaatct 2701 gcatccacat aatcaaatta aaatggcaga gttgcttgta agactttcaa attgcggagt 2761 taaaattata atcacaacgc atagtgatta tatcgttaaa gagattaata atagaataat 2821 ggcttcgcag ctgaaagata aatcacgatt aactgaactt ggatacaaag aagcagattt 2881 gattttttcg tcagaggtta atggttttac tatcggtaat gatggtgcca tctctgaggt 2941 tgaagggaat aggtatgggg tgaatgcttt tctttttgat aatgttatta atgatataga 3001 aaacaaggct gatctcttgt atacatattt agaagagggg ctctaatatg ctggagaggt 3061 ttattgatgt tttaaataaa gatgttttgt ttgatttgtc ggcaactcca tctcctgact 3121 cttcggtgtt agttgttcgt gaagatggtg agcttagtga aataaaagag ttaactataa 3181 aagaaatacc tgatgattcg attgctttca ctttggattt ttcaagcaag aaaaactcta 3241 aagaaaatgg cgctttattt tctcaattgt cgccatactt tgacaagtct aatggcgatg 3301 gggtgaataa atcttgtgat cttgtattga ttacaagaga tggcgataag ttcactgttc 3361 ttatttttga ccaaaagtca aaaaaacctg atatagaatc atcatttttg cagttggaaa 3421 actcaagagt ttttgtttcc tatgtaatta atattatttc tttaatttat aaagacaata 3481 ttgatgaggg gaagattatt tttaaacgag ttattgggac tacaagggtt gtaaaaactg 3541 gagttaatgc tgctaatcat gagcaggaac gatcgagaag agagaagctt cgtgctcttg 3601 gcatgaatga agtctcgata aagcgtacgg catcaataga aaagggatgg ttggactatc 3661 gaggaatcgt ttccttttag tctacttcca gtagtctcaa gtgcttgtgt tgagagagga 3721 agaacggtat ctttcaacat ataaagaaaa accaccgcta ccaacggtgg ttttcttaag 3781 gtttatggag ctaccaactc attaaaccta ggtagctggc ttggaggagc acagtcacca 3841 aaacttgttc tttcagttta gccttaacag gcgtctaact tcaagactat ctcctctaaa 3901 tcagttacca gtggctgctg ccagtggcgc ttttgcatgt cttaccgggt tggactcaag 3961 acgatagtta ccggataagg cgcagcggtc ggactgaacg gggggttcgt gcatacagtc 4021 cagcttggag cgaactgcct tcccggaacc gagtgtcagg cgtggaatga gaaaccgcgg 4081 ccataacagc ggaatgacac cggtaaaccg aatggcagga acaggagagc gcacgaggga 4141 gccacctatc agaaatgata ggtatcttta tagtcctgtc gggtttcgcc accactgatt 4201 tgagcgtctt tctgtgatgc ttgtcagggg ggcggagcct atggaaaaac gacggccgt //