Definition | Orientia tsutsugamushi Boryong, complete genome. |
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Accession | NC_009488 |
Length | 2,127,051 |
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The map label for this gene is 148284489
Identifier: 148284489
GI number: 148284489
Start: 844116
End: 844367
Strand: Direct
Name: 148284489
Synonym: OTBS_0860
Alternate gene names: NA
Gene position: 844116-844367 (Clockwise)
Preceding gene: 148284488
Following gene: 148284501
Centisome position: 39.68
GC content: 27.38
Gene sequence:
>252_bases ATGTCAGAAAATGTTGTCTCTAGTAACCAACTCAAACAAATTATTGAAAAAATTGAAAGATTAGAAGTAGAAAAAGCTAA TATAACCGAAGACATTCAAGCAGTATATGCTGAAGCAAAAAGTTATGGATTAGACACTCATACACTGAAGCAAGTAATTA AAATCAAAAAAATGGATAAAAGTAAATTTAAAGAACAAGAAGAATTACTTGAGACTTACTTAAGTGCTTTAGGAATAATT AAGAGTTGTTAA
Upstream 100 bases:
>100_bases ACAAATTTTCTCCTATTTGCAATTACTTTAAATAGTGTATATTATTACCAAGATTTAGTATTTCAAATCAAAAAATTTAA TAACACAAAGAAGGATTTAT
Downstream 100 bases:
>100_bases ATGCATTAAATTATGTAATTAATAAATTGTCAGTACAGATATTTTGTATAAACATTACCTAATAATAAAGCTGCAAAGAC ATATCAAATATAAAGAAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 83; Mature: 82
Protein sequence:
>83_residues MSENVVSSNQLKQIIEKIERLEVEKANITEDIQAVYAEAKSYGLDTHTLKQVIKIKKMDKSKFKEQEELLETYLSALGII KSC
Sequences:
>Translated_83_residues MSENVVSSNQLKQIIEKIERLEVEKANITEDIQAVYAEAKSYGLDTHTLKQVIKIKKMDKSKFKEQEELLETYLSALGII KSC >Mature_82_residues SENVVSSNQLKQIIEKIERLEVEKANITEDIQAVYAEAKSYGLDTHTLKQVIKIKKMDKSKFKEQEELLETYLSALGIIK SC
Specific function: Unknown
COG id: COG3750
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0335 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018753 [H]
Pfam domain/function: PF10073 DUF2312 [H]
EC number: NA
Molecular weight: Translated: 9503; Mature: 9372
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSENVVSSNQLKQIIEKIERLEVEKANITEDIQAVYAEAKSYGLDTHTLKQVIKIKKMDK CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH SKFKEQEELLETYLSALGIIKSC HHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SENVVSSNQLKQIIEKIERLEVEKANITEDIQAVYAEAKSYGLDTHTLKQVIKIKKMDK CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH SKFKEQEELLETYLSALGIIKSC HHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA