LOCUS NC_009345 8401 bp DNA circular BCT 24-JUL-2008 DEFINITION Shigella sonnei Ss046 plasmid pSS046_spA, complete sequence. ACCESSION NC_009345 VERSION NC_009345.1 GI:145294025 DBLINK Project:13151 KEYWORDS . SOURCE Shigella sonnei Ss046 ORGANISM Shigella sonnei Ss046 Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella. REFERENCE 1 (bases 1 to 8401) AUTHORS Yang,F., Yang,J., Zhang,X., Chen,L., Jiang,Y., Yan,Y., Tang,X., Wang,J., Xiong,Z., Dong,J., Xue,Y., Zhu,Y., Xu,X., Sun,L., Chen,S., Nie,H., Peng,J., Xu,J., Wang,Y., Yuan,Z., Wen,Y., Yao,Z., Shen,Y., Qiang,B., Hou,Y., Yu,J. and Jin,Q. TITLE Genome dynamics and diversity of Shigella species, the etiologic agents of bacillary dysentery JOURNAL Nucleic Acids Res. 33 (19), 6445-6458 (2005) PUBMED 16275786 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 8401) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (17-APR-2007) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 8401) AUTHORS Yang,J., Yang,F., Chen,L. and Jin,Q. TITLE Direct Submission JOURNAL Submitted (27-MAR-2007) State Key Laboratory for Moleclular Virology and Genetic Engineering, Microbial Genome Center of Chinese Ministry of Public Health, 100 YingXin Street, XuanWu, Beijing 100052, P.R.China COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000641. COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..8401 /organism="Shigella sonnei Ss046" /mol_type="genomic DNA" /strain="Ss046" /db_xref="taxon:300269" /plasmid="pSS046_spA" gene complement(474..1124) /gene="tetR" /locus_tag="SSON_PA01" /db_xref="GeneID:4991505" CDS complement(474..1124) /gene="tetR" /locus_tag="SSON_PA01" /note="tetracycline resistance repressor protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_001139952.1" /db_xref="GI:145294026" /db_xref="GeneID:4991505" /translation="MTKLQPNTVIRAALDLLNEVGVDGLTTRKLAERLGVQQPALYWH FRNKRALLDALAEAMLAENHTHSVPRADDDWRSFLIGNARSFRQALLAYRDGARIHAG TRPGAPQMETADAQLRFLCEAGFSAGDAVNALMTISYFTVGAVLEEQAGDSDAGERGG TVEQAPLSPLLRAAIDAFDEAGPDAAFEQGLAVIVDGLAKRRLVVRNVEGPRKGDD" gene 1155..2429 /gene="tetA" /locus_tag="SSON_PA02" /db_xref="GeneID:4991506" CDS 1155..2429 /gene="tetA" /locus_tag="SSON_PA02" /note="tetracycline resistance protein A" /codon_start=1 /transl_table=11 /product="TetA" /protein_id="YP_001139953.1" /db_xref="GI:145294027" /db_xref="GeneID:4991506" /translation="MSTNLSVIKNPRVQSDQRRLVRRPDVKPNRPLIVILSTVALDAV GIGLIMPVLPGLLRDLVHSNDVTAHYGILLALYALMQFACAPVLGALSDRFGRRPVLL VSLAGAAVDYAIMATAPFLWVLYIGRIVAGITGATGAVAGAYIADITDGDERARHFGF MSACFGFGMVAGPVLGGLMGGFSPHAPFFAAAALNGLNFLTGCFLLPESHKGERRPLR REALNPLASFRWARGMTVVAALMAVFFIMQLVGQVPAALWVIFGEDRFHWDATTIGIS LAAFGILHSLAQAMITGPVAARLGERRALMLGMIADGTGYILLAFATRGWMAFPIMVL LASGGIGMPALQAMLSRQVDEERQGQLQGSLAALTSLTSIVGPLLFTAIYAASITTWN GWAWIAGAALYLLCLPALRRGLWRNSSNSRCT" gene 5780..6595 /gene="sulII" /locus_tag="SSON_PA03" /db_xref="GeneID:4991507" CDS 5780..6595 /gene="sulII" /locus_tag="SSON_PA03" /note="dihydropteroate synthase type II" /codon_start=1 /transl_table=11 /product="SulII" /protein_id="YP_001139954.1" /db_xref="GI:145294028" /db_xref="GeneID:4991507" /translation="MNKSLIIFGIVNITSDSFSDGGRYLAPDAAIAQARKLMAEGADV IDLGPASSNPDAAPVSSDTEIARIAPVLDALKADGIPVSLDSYQPATQAYALSRGVAY LNDIRGFPDAAFYPQLAKSSAKLVVMHSVQDGQADRREAPAGDIMDHIAAFFDARIAA LTGAGIKRNRLVLDPGMGFFLGAAPETSLSVLARFDELRLRFDLPVLLSVSRKSFLRA LTGRGPGDVGAATLAAELAAAAGGADFIRTHEPRPLRDGLAVLAALKETARIR" gene 6656..7459 /gene="strA" /locus_tag="SSON_PA04" /db_xref="GeneID:4991508" CDS 6656..7459 /gene="strA" /locus_tag="SSON_PA04" /note="streptomycin resistance protein A" /codon_start=1 /transl_table=11 /product="StrA" /protein_id="YP_001139955.1" /db_xref="GI:145294029" /db_xref="GeneID:4991508" /translation="MNRTNIFFGESHSDWLPVRGGESGDFVFRRGDGHAFAKIAPASR RGELAGERDRLIWLKGRGVACPEVINWQEEQEGACLVITAIPGVPAADLSGADLLKAW PSMGQQLGAVHSLSVDQCPFERRLSRMFGRAVDVVSRNAVNPDFLPDEDKSTPQLDLL ARVERELPVRLDQERTDMVVCHGDPCMPNFMVDPKTLQCTGLIDLGRLGTADRYADLA LMIANAEENWAAPDEAERAFAVLFNVLGIEAPDRERLAFYLRLDPLTWG" gene 7459..8295 /gene="strB" /locus_tag="SSON_PA05" /db_xref="GeneID:4991509" CDS 7459..8295 /gene="strB" /locus_tag="SSON_PA05" /note="streptomycin resistance protein B" /codon_start=1 /transl_table=11 /product="StrB" /protein_id="YP_001139956.1" /db_xref="GI:145294030" /db_xref="GeneID:4991509" /translation="MFMPPVFPAHWHVSQPVLIADTFSSLVWKVSLPDGTPAIVKGLK PIEDIADELRGADYLVWRNGRGAVRLLGRENNLMLLEYAGERMLSHIVAEHGDYQATE IAAELMAKLYAASEEPLPSALLPIRDRFAALFQRARDDQNAGCQTDYVHAAIIADQMM SNASELRGLHGDLHHENIMFSSRGWLVIDPVGLVGEVGFGAANMFYDPADRDDLCLDP RRIAQMADAFSRALDVDPRRLLDQAYAYGCLSAAWNADGEEEQRDLAIAAAIKQVRQT SY" ORIGIN 1 tggaagcccc gtagcgacgc ggagaggggc gagacaagcc aagggcgcag gctcgatgcg 61 cagcacgaca tagccggttc tcgcaaggac gagaatttcc ctgcggtgcc cctcaagtgt 121 caatgaaagt ttccaacgcg agccattcgc gagagccttg agtccacgct agatctatct 181 catctgcgca aggcagaacg tgaagacggc cgccctggac ctcgcccgcg agcgccaggc 241 gcacgaggcc ggcgcgcgga cccgcgccac ggcccacgag cggacgccgc agcaggagcg 301 ccagaaggcc gccagagagg ccgagcgcgg ccgtgaggct tggacgctag ggcagggcat 361 gaaaaagccc gtagcgggct gctacgggcg tctgacgcgg tggaaagggg gaggggatgt 421 tgtctacatg gctctgctgt agtgagtggg ttgcgctccg gcagcggtcc tgatcaatcg 481 tcaccctttc tcggtccttc aacgttcctg acaacgagcc tccttttcgc caatccatcg 541 acaatcaccg cgagtccctg ctcgaacgct gcgtccggac cggcttcgtc gaaggcgtct 601 atcgcggccc gcaacagcgg cgagagcgga gcctgttcaa cggtgccgcc gcgctcgccg 661 gcatcgctgt cgccggcctg ctcctcaagc acggccccaa cagtgaagta gctgattgtc 721 atcagcgcat tgacggcgtc cccggccgaa aaacccgcct cgcagaggaa gcgaagctgc 781 gcgtcggccg tttccatctg cggtgcgccc ggtcgcgtgc cggcatggat gcgcgcgcca 841 tcgcggtagg cgagcagcgc ctgcctgaag ctgcgggcat tcccgatcag aaatgagcgc 901 cagtcgtcgt cggctctcgg caccgaatgc gtatgattct ccgccagcat ggcttcggcc 961 agtgcgtcga gcagcgcccg cttgttcctg aagtgccagt aaagcgccgg ctgctgaacc 1021 cccaaccgtt ccgccagttt gcgtgtcgtc agaccgtcta cgccgacctc gttcaacagg 1081 tccagggcgg cacggatcac tgtattcggc tgcaactttg tcatgcttga cactttatca 1141 ctgataaaca taatatgtcc accaacttat cagtgataaa gaatccgcgc gttcaatcgg 1201 accagcggag gctggtccgg aggccagacg tgaaacccaa cagacccctg atcgtaattc 1261 tgagcactgt cgcgctcgac gctgtcggca tcggcctgat tatgccggtg ctgccgggcc 1321 tcctgcgcga tctggttcac tcgaacgacg tcaccgccca ctatggcatt ctgctggcgc 1381 tgtatgcgtt gatgcaattt gcctgcgcac ctgtgctggg cgcgctgtcg gatcgtttcg 1441 ggcggcggcc ggtcttgctc gtctcgctgg ccggcgctgc tgtcgactac gccatcatgg 1501 cgacggcgcc tttcctttgg gttctctata tcgggcggat cgtggccggc atcaccgggg 1561 cgactggggc ggtagccggc gcttatattg ccgatatcac tgatggcgat gagcgcgcgc 1621 ggcacttcgg cttcatgagc gcctgtttcg ggttcgggat ggtcgcggga cctgtgctcg 1681 gtgggctgat gggcggtttc tccccccacg ctccgttctt cgccgcggca gccttgaacg 1741 gcctcaattt cctgacgggc tgtttccttt tgccggagtc gcacaaaggc gaacgccggc 1801 cgttacgccg ggaggctctc aacccgctcg cttcgttccg gtgggcccgg ggcatgaccg 1861 tcgtcgccgc cctgatggcg gtcttcttca tcatgcaact tgtcggacag gtgccggccg 1921 cgctttgggt cattttcggc gaggatcgct ttcactggga cgcgaccacg atcggcattt 1981 cgcttgccgc atttggcatt ctgcattcac tcgcccaggc aatgatcacc ggccctgtag 2041 ccgcccggct cggcgaaagg cgggcactca tgctcggaat gattgccgac ggcacaggct 2101 acatcctgct tgccttcgcg acacggggat ggatggcgtt cccgatcatg gtcctgcttg 2161 cttcgggtgg catcggaatg ccggcgctgc aagcaatgtt gtccaggcag gtggatgagg 2221 aacgtcaggg gcagctgcaa ggctcactgg cggcgctcac cagcctgacc tcgatcgtcg 2281 gacccctcct cttcacggcg atctatgcgg cttctataac aacgtggaac gggtgggcat 2341 ggattgcagg cgctgccctc tacttgctct gcctgccggc gctgcgtcgc gggctttgga 2401 gaaattcttc aaattcccgt tgcacatagc ccggcaattc ctttccctgc tctgccataa 2461 gcgcagcgaa tgccgggtaa tactcgtcaa cgatctgata gagaagggtt tgctcgggtc 2521 ggtggctctg gtaacgacca gtatcccgat cccggctggc cgtcctggcc gccacatgag 2581 gcatgttccg cgtccttgca atactgtgtt tacatacagt ctatcgctta gcggaaagtt 2641 cttttaccct cagccgaaat gcctgccgtt gctagacatt gccagccagt gcccgtcact 2701 cccactctta cattgttcgc agtatctagg tacatgttat tgcgtgcacc ttcatgatgt 2761 ataatgttat taatgacagc agaaagatcg acagaattaa tattcttcgt acctgggaca 2821 gttatcgggt gtcggccagt gatgagacca aaggatgcag tataagatga accactacta 2881 ttatcatggc caccattacc accaccgtta aaactacctc ccgaacttcc agagccgcta 2941 tgaccatcat tgtaggggtc atttggtccc atgtgaccaa aaccaccgac agtaccgcta 3001 tttaactctg tactcataaa attatcctct ttgactttta aaaacagcaa aaactgtatt 3061 tataacaatg tgtttatata cagtattcga aatactacgc ccgtcaaaac cacaccgtca 3121 acaggttttt tgtgtatttt tcacgcctca cgggcagcct cagacctttt gtgttaaaac 3181 agtaatatgt tctgctgtta caatacggta cacacaggag acactgtcac ttttatggca 3241 tggcacacag ttcaagagac actgaaatta acaggaaagt cgcgctcgca attatatcgt 3301 gacatggcta aaggccttgt cagctatcgc acaggaaaaa atgatcgccg ggagttcgag 3361 accagtgaac tgattcgggc ctatggcgag ctgcgcactt ctgagacacc aaaaaggcac 3421 aaggagggac actccaaatc tgtcgttagc caggcggaaa atgctcagct agacgtcatt 3481 cagcagaaac tggacgctct gcagcagact gttaccctaa tgcttgaaga caagatggcg 3541 cgggaagcag aaaaccgcct gcgaaatgag gagagggaac aactacaggc cgaaattagc 3601 cgtctggctg acgcgctggc acaggaaaaa aagcggggat tctggtcgcg gctgtttcgc 3661 tccggttcag agtaacagtg caggtgactc tgatttacca taacatctgt tatcagcacc 3721 gcctgagagg ccctcagggc gtttctgacg ggaaaccggt aaaacaggca acaaaccacc 3781 cgaaaacccg ccagaaacgc gcaggctctg tttttacggc atgcatgagt atgcgcacaa 3841 gtgcatagcg cggaaattca caccattcag ccggggtaag tcctgtttcc ggcgttcttc 3901 ccatccgaaa acggtgaacg gggacgcaat ttattgcgtg gccgtgaagc gttgccggcg 3961 cagccggaaa acccgctgtc agcacgttca ggaagggggt gatgtacaaa tggcacagag 4021 gatgaaagtg acgtatgagc tgaaggaatg atgtaaaagt gatgtataag tgatgtataa 4081 gtgatgtata agtgatgtaa aagtgatgta tgaactgaag gagcgatgta attctgtagt 4141 caggaagaat aacccgttca tgcaggcatg aacgatacag tgaggaacgc tttttttgtc 4201 acgatctccc cttaacctgc gtaaatcacc cgccatggtt gattattttt caacctcaaa 4261 atggtcatac acctaacgca gccgcgattt tcatcgcaac tgcatgaatt aaaagaaaaa 4321 aaaggaatat ttcgttttca cgagtaatac ccgggtatta aaaatccact gtaattacat 4381 gaaaataaag aaataaaagg taataccgga gtattaccac gtacgcgggc aagcgaaaaa 4441 gctataacgc ttcccggccg acaggcgacc caaaatccac aggggcatgc aggttctctt 4501 cagtaacctg cgccattaaa tcaaaaaggt catattcgcc gggaagctgc gtatcagtcg 4561 aatccagttg ttcatcatat tcagatggca tggggtgata tccagtagct gagaggttgt 4621 tagcgggttt cggggcgcag ccctgaacca gtcatgtagc gctagcggag tgtatactgg 4681 cttactatgt tgccacgatt gcgaaaatca gtgaagtgct tcatgtggca ggagaaaaaa 4741 ggcagcaccg gcgcgtcagc agaatatgcg atacaggaga tattccgctt cctcgctcac 4801 tgactcgcta cgctcggtcg ttcggctgcg gcgagcggta ccggcttacg gacggggacg 4861 gaaatttcct ggaagatacc aggaagacac ttagcaaaga agagataagg ccacggcgaa 4921 gccgtttttc cataggctcc gcccccctga caagcatcgc aaaatctgac gctcaaatca 4981 gtggtggcga aacccgacag gactataaag atcccaggcg tttccccctg gtagctccct 5041 cgtgcgctct cctgttcctg cctttcggtt taccggtgtc attccgctgt tatggccgcg 5101 gtttctcatt ccacgcctga cactcagttc cgtgaaggca gttcgctcca agctggactg 5161 tatgcacgaa ccccccgttc agtccgaccg ctgcgccttg tccggtaact atcaacttga 5221 gtccaacccg gaaagacacg acaaaacgcc actggcagca gccattagta acaggagtgc 5281 acgagaagat agattaagag gtcttgaagt agaggcctga ctgcggctac actgaaagaa 5341 cagttttggt aatggcggtc tcgtgaaccc tgttaccggg ttaagcagtt ccccaactga 5401 cttaaccttc gaacaaaccg cctccccagg cggttttttc gtttacagag caagagatta 5461 cgattcattg aaaaggatct caagaagatc ctttgtagat tactatcaat taatcttccg 5521 aacatgacac cagtcactgt tgattacggt taaaccgctc cgtaacaggt ttccctcgta 5581 ttggtgactt gcagcaccaa agaagcaaaa aagataaata tatctactta ttgagagatg 5641 atatatttat ttccaaaatg ctacagatac atcatcatga aacggatcac cgcaaacagg 5701 ttactcgcct ggggattccc tttcgacccg agcatccgta tgagactcat gctcgattat 5761 tattattata gaagccccca tgaataaatc gctcatcatt ttcggcatcg tcaacataac 5821 ctcggacagt ttctccgatg gaggccggta tctggcgcca gacgcagcca ttgcgcaggc 5881 gcgtaagctg atggccgagg gggcagatgt gatcgacctc ggtccggcat ccagcaatcc 5941 cgacgccgcg cctgtttcgt ccgacacaga aatcgcgcgt atcgcgccgg tgctggacgc 6001 gctcaaggca gatggcattc ccgtctcgct cgacagttat caacccgcga cgcaagccta 6061 tgccttgtcg cgtggtgtgg cctatctcaa tgatattcgc ggttttccag acgctgcgtt 6121 ctatccgcaa ttggcgaaat catctgccaa actcgtcgtt atgcattcgg tgcaagacgg 6181 gcaggcagat cggcgcgagg cacccgctgg cgacatcatg gatcacattg cggcgttctt 6241 tgacgcgcgc atcgcggcgc tgacgggtgc cggtatcaaa cgcaaccgcc ttgtccttga 6301 tcccggcatg gggttttttc tgggggctgc tcccgaaacc tcgctctcgg tgctggcgcg 6361 gttcgatgaa ttgcggctgc gcttcgattt gccggtgctt ctgtctgttt cgcgcaaatc 6421 ctttctgcgc gcgctcacag gccgtggtcc gggggatgtc ggggccgcga cactcgctgc 6481 agagcttgcc gccgccgcag gtggagctga cttcatccgc acacacgagc cgcgcccctt 6541 gcgcgacggg ctggcggtat tggcggcgct gaaagaaacc gcaagaattc gttaactgca 6601 cattcgggat atttctctat attcgcgctt catcagaaaa ctgaaggaac ctccattgaa 6661 tcgaactaat attttttttg gtgaatcgca ttctgactgg ttgcctgtca gaggcggaga 6721 atctggtgat tttgtttttc gacgtggtga cgggcatgcc ttcgcgaaaa tcgcacctgc 6781 ttcccgccgc ggtgagctcg ctggagagcg tgaccgcctc atttggctca aaggtcgagg 6841 tgtggcttgc cccgaggtca tcaactggca ggaggaacag gagggtgcat gcttggtgat 6901 aacggcaatt ccgggagtac cggcggctga tctgtctgga gcggatttgc tcaaagcgtg 6961 gccgtcaatg gggcagcaac ttggcgctgt tcacagccta tcggttgatc aatgtccgtt 7021 tgagcgcagg ctgtcgcgaa tgttcggacg cgccgttgat gtggtgtccc gcaatgccgt 7081 caatcccgac ttcttaccgg acgaggacaa gagtacgccg cagctcgatc ttttggctcg 7141 tgtcgaacga gagctaccgg tgcggctcga ccaagagcgc accgatatgg ttgtttgcca 7201 tggtgatccc tgcatgccga acttcatggt ggaccctaaa actcttcaat gcacgggtct 7261 gatcgacctt gggcggctcg gaacagcaga tcgctatgcc gatttggcac tcatgattgc 7321 taacgccgaa gagaactggg cagcgccaga tgaagcagag cgcgccttcg ctgtcctatt 7381 caatgtattg gggatcgaag cccccgaccg cgaacgcctt gccttctatc tgcgattgga 7441 ccctctgact tggggttgat gttcatgccg cctgtttttc ctgctcattg gcacgtttcg 7501 caacctgttc tcattgcgga caccttttcc agcctcgttt ggaaagtttc attgccagac 7561 gggactcctg caatcgtcaa gggattgaaa cctatagaag acattgctga tgaactgcgc 7621 ggggccgact atctggtatg gcgcaatggg aggggagcag tccggttgct cggtcgtgag 7681 aacaatctga tgttgctcga atatgccggg gagcgaatgc tctctcacat cgttgccgag 7741 cacggcgact accaggcgac cgaaattgca gcggaactaa tggcgaagct gtatgccgca 7801 tctgaggaac ccctgccttc tgcccttctc ccgatccggg atcgctttgc agctttgttt 7861 cagcgggcgc gcgatgatca aaacgcaggt tgtcaaactg actacgtcca cgcggcgatt 7921 atagccgatc aaatgatgag caatgcctcg gaactgcgtg ggctacatgg cgatctgcat 7981 catgaaaaca tcatgttctc cagtcgcggc tggctggtga tagatcccgt cggtctggtc 8041 ggtgaagtgg gctttggcgc cgccaatatg ttctacgatc cggctgacag agacgacctt 8101 tgtctcgatc ctagacgcat tgcacagatg gcggacgcat tctctcgtgc gctggacgtc 8161 gatccgcgtc gcctgctcga ccaggcgtac gcttatgggt gcctttccgc agcttggaac 8221 gcggatggag aagaggagca acgcgatcta gctatcgcgg ccgcgatcaa gcaggtgcga 8281 cagacgtcat actagatatc aagcgacttc tcctatcccc tgggaacaca tcaatctcac 8341 cggagaatat cgctggccaa agccttagcg taggattccg ccccttcccg caaacgaccc 8401 c //