>gi|99077903|ref|YP_611162.1| hemolysin-type calcium-binding region [Ruegeria sp. TM1040]
MSTILTFSSNDGNGIGADNLATDGEGGSSDIGGITIQIANISDVLGTQISSLNWYNDGNLSSGDGFSGIT
TDFAFGGEWKGMSIRSAGGEEFQLESFDFFDWGTFPYAASTLNITGFRDNVQVATDTFSSNNNNNRVNVD
ISGNTTFDAVDEVRITFDIGTGYLSLNNITIANAVPPNTAPSLGGTPADDTAVEDAAAAIDLSAYNISDA
EGDDPLTLTLAVDRGTIASVDGNGTVDGVTIASSSTSNMTLQGSAAALNTYLDDTSHITFTTDSNDTSAA
TLTVTPNDGTANGTADTVTITITPVNDDPSVSGLPASVTVAEDTLSNIDLSAASIGDIDSSTITVTLSAS
GGSFGTPSDGAGTGGGVTETLVNATTISLVGSPADISTYLDTASNIRYTPPSNAVGAGQATISVTANDGD
GSGDVALGTVQVNVTEVNDPPVLTGLDATPSVTEDGIPVVLDADVTISDEELDALNGGNGDYAGATLAIA
RNGGADTSDILSVITGGNLTVAGGPNGGGTISASGNVIATISNTGNGQLQITFADNGTTPTTALVNESLQ
AIRYTNGADDPATSVQLDWDFSDGNGHAAGSVTVSLTNVNDAPTLTATGGNPTFVEGGAAQDLYNTVSAD
AVEIGDRITGLTLTVTNLADSASEILSIDGSDVALTDGNSVTTATNSLSVSVNVSGTTATVSFTGATLSA
AQAQTLVDGLTYRNLSDNPTTAGNRVVTITGITDDGGTANGGAASNAPTLSSTVSLTAVNDAPSVASVFG
ETSQIITGGGAQAITGLANATVSNADSIDYNGGFLTIAQISGAGNGSWGVDGTTVTAGGDGTILVGETLQ
VSGVTIGTIDATADGQSGHDLTINFNADSSSARIEAFLQNLRFEAPSSIGDRGYTLTLNDGDGIANGGDA
DASGSITLSITPNPPVLGNLDGDSVSATENAGAVSLDIGANATVTDADSPNFNGGTLRASVTNNADAASD
VLSVATSGVVALAAMTAGSNVSVSGTVIGTLANNIVAGNDFVVTLNADATPARVQSIVQALSFEATGEAP
TAGTRTVSVTLSDGSGSGNAHVNVAVTALNDAPQITGLVSDVSFTEDTPANLDLSALTLSDVDTTSSLTL
TLTASAGTLAATSGGGVTVGGSATGTLILAGTIVDIDTFLNSATHVHYSPAANAAGNDAATISLTINDTG
TSTDLGTVNVDITPVNDAPTNPATADIQQAFDTPHTFTVGDFGFADVDGDTLQSVRIDTLPGAGVLSLNA
SPVSATDVITIGDIIGGNIVFTAASGASGDDYAIFTYSVNDGTTFSAAPGTITIDVAAAPPAGGGGQPAE
PEPDLVDGVPVERTTTTENSLSVEKIVITPVSNTREDTDAATSLADIPLHFDSDGQAVTTVSVPTGVGFT
ARANETATIQTSFRDGLYLLRDSAPESDWFSMINGLDQWLNGVSAGWLNQVTLTTNTTSAPSEPIRITGR
EGDSTEVMVIDGSQLPVGAVLDLDNIEFAIIVGDVTVRSGAGTNVVYAGSGAQNIVLGADDDHLNGGDGD
DTIGSEGGDDRLFGDAGNDTLFGGPGANVMHGGLGMDTIIYAANRDRFEISIEKGQVIVTSLDGPSLQDT
IINAELIRFTDTDLSIDASSSAFSESDLTIATLFTTVLGRQADLAGYQFWTNVADTKLDLASIAMFMLRS
EENTQTEGQAFDTLSLEAQIDRLYQEILGRAPDDAGAAFWNAAAEAGFAIDDIAGAFVDAPEFVGLALQP
TGLDFLI
>gi|99077904|ref|YP_611163.1| hypothetical protein TM1040_3768 [Ruegeria sp. TM1040]
MKPVILPSQMTAHQRREAWYGEEIPHARYLRDYDFPLKEALFFCLSELEGILGAEAIAPKIAAIVPGNQP
TDWDWRSLPFDSSVSPSASGWDCAKRLDDAGLYGLLGVRPANVPFEARKSWVAKLPLELDDWRQNVRLGK
DANNISLIIDLALSRHAMDTGLSLASITDEDLNEEGEVSVPALAVFGGVSEGRIRNVLSSGESCLVRKSG
QAVTASSAKEWLAGRKEFYQSIWDLPEGEKPEPKARNFSGEVLFVPVASDGSTFNPELKHKGKYTVGAKG
QEIQFDQFQDALNALQKMSTPRWRRPNAAGNWCIVSGRDWKRIEKK
>gi|99077905|ref|YP_611164.1| hypothetical protein TM1040_3769 [Ruegeria sp. TM1040]
MYNTGRMWRLRNDPATKTDGDIAKAMRNAFIARHCSCTWVTLPDDADISGLEAKVIALVTSDMVAWNRRG
MHVYDGPAELVDALLKALRLSPVERAAIARQQVRQMAGESAAQAPHDTAPVLDDVCVAYPRHPQFTSIAS
AVLPVQRKRPRGCEG
>gi|99077906|ref|YP_611165.1| hypothetical protein TM1040_3770 [Ruegeria sp. TM1040]
MNQTAHISLQSSNNVKEQTPKTQKQTVAQILSATAYIHTRMPQSLLSVITVFPIRQQRLRRDQPRLSAAG
EALFMDTRKESQPQKTPTTNKNEKLPKRPDFSSLTQAPNQDHSGKHPTPKEEGLLIPCLRKRGSGE
>gi|99077907|ref|YP_611166.1| hypothetical protein TM1040_3771 [Ruegeria sp. TM1040]
MKLLGMISLSSIAMSAYTDLVRLLKDEALSGVEGKPTLKERGDKAYWYAVRRVGTEMRFLYIGEDSDETR
ARIGRIEELRGAAKERQAERSRLVRLLRAEGMTPTDRSTGSILSAMAAAGTFRLGGTIVGTNAFRLYEGE
LGVRLPLAGMANTADIDIAQFEKLSVALQDQVDPGLAETFSALKFDPLPALDQGRSWRWAQGGSGQLVEF
LTPAFGDESVRDLPALGVSAQGLNYLNFLIAEPIHAAAIYRSGVLVQVPRPERYAIHKLIIADRRRDGAG
SLKSAKDREQAAFLIEAMAEDRPDDLLQAYATAMEVGPRWREHIGNSLTRMPETKGTLDSLGA
>gi|99077908|ref|YP_611167.1| hypothetical protein TM1040_3772 [Ruegeria sp. TM1040]
MTSALSEAGGYPPEGQGAYFLCDIFDAMPKNDLASMEHPLFSLSTRPDRRILNYEHNGAEITVTPSVKGL
ATIHDKDILIFCVSQLMAALNAGRQVSRVLHLTAHDLLVACNRETSGDAYRRLRESFERLAGTRITTNIT
TGGQEITTGFGLIESWEIVRKARGGRMVSVAVTLSDWLYRAVLSKSVLTLSRDYFRLRKPLERRIYELAR
KHCGRQDSWQISVETLLKKSGSASPRRVFRKMVRDMIESQPLPDYEMAELEGDIIRFSQKAAVVDVPPPV
ISEAARDEARRLMPGVDVHALEADWRATWARTGAPRLRKPDAAFVGWVRKRMND
>gi|99077909|ref|YP_611168.1| cobyrinic acid a,c-diamide synthase [Ruegeria sp. TM1040]
MAKDIHSKAGTTLPPYFNIDPDAAMAELDQPTDTARFAEIAEGCARGRADLASRGLNEEGSKNLRLFSTW
EITRYLIPVAQAHFRRVLKANPDLPQGRSETEGGAKWFTLDEVLRLRAFFAAQGSKAKNYLPYRPEGLPA
KLVAVANFKGGVGKTSTAAHLAMSAALDGYKVLVIDLDSQGSMTSIFGGKIEDEWQTAFPLLARHYGEHL
RVENQRRLDRGDAPQPLDESLTAAMEMTAKDVIQPTHWPNIDLIGAQLNLYWAEFQIPVWRMAARSWKLW
DALTDRLEADGVLDQYDVVFIDTPPALGYLTINGLSAADILLVPMGASFLEFDSTGRFFDMLHSTFASIE
EGENLAARALGRPEIGFEWDAVRAVITRYDGAQQGELAGLVQAYMGPTLSPHRQDFTALIGQAGEQVNGI
YEADYRDFNRETYARGRETFDETYAAFKRLLNGVWRREELAVQEERAAS
>gi|99077910|ref|YP_611169.1| ParB-like nuclease [Ruegeria sp. TM1040]
MAKRKRLTPAQPTYLSGNEKAGASAPGPLSMGAAPIAQVASDTSASAALEELSGVLERARTKGLMIEELP
LGAIDETYLVRDRIVQGEDDMQGLMESLKARGQHTPIEVVKREDAHGEKTHGLISGWRRLTALRRLYEET
SDPKFATIKALVVRPESAADAYLAMVEENEIRVNLSHYERARIAVQALAEGVYPDQRKALLGLFQNVPRA
KRSKIASFVTLVEALDDVLRYPTAIPEKLGLGLARAFAQTPQFAQEVAQKLRERPCVDAEGEQALLSDLL
AAHEQSGIADVTETPPAVSDPEETPQTPPTSDSPTLMPQVRSLDPVDQNENSEQGSMPVSTGVHLDYSPS
HQRIELTGPGVDTALLTALKDWLRQR
>gi|99077911|ref|YP_611170.1| UDP-glucose 6-dehydrogenase [Ruegeria sp. TM1040]
MRIAMIGTGYVGLVSGVCFSDFGHDVTCVDKDATKVARLQAGEAPIYEPGLEDLMARNVAAGRLSFTDDL
ATAVATADAVFIAVGTPTRRGDGHADLTYVMAASEEIAAALQGYTVVVTKSTVPVGTNRQVKQVIAKSNP
AAEFDVASNPEFLREGAAIDDFMRPDRVVVGVQNERAAEVMAEIYRPLYLRDFPILTTDLESAEMIKYAA
NAFLATKITFINEIAGLCERVGADVKEVSHGMGLDGRIGNKFLHAGPGYGGSCFPKDTAALARIGQDHGY
PMQITETVMRVNHEIKARMLEKLRDACDGSFNGKTITILGVTFKPNTDDMREAPSLTIVPALIGGGAKVR
VVDPQGEAEGRDLLPGVKWEEDPYKAARNADLVVLLTEWNEFRALDLKALARKMAQPRMVDLRNIYTAKS
ARQAGFETYMSVGR
>gi|99077912|ref|YP_611171.1| NAD-dependent epimerase/dehydratase [Ruegeria sp. TM1040]
MRTALITGTAGFIGYHLATYLLASGWQVVGLDCLSPYYDIALKRRRHAMLEVNDNFIPVIGKLEDPGRLM
GLLADHKPNAVIHLAAQAGVRHSIDAPRDYLEANLIGTFEVLEAARAHPPEHIMIASTSSAYGANTNIPF
DEHQKADHQMSFYAATKKAGETMAHSYAHLYGLPTTMFRFFTVYGPWGRPDMALFKFTKAIEAGEAIDVY
NHGRMSRDFTYIDDLVAGITGLIEAVPGDTPVSTQDTLSPVAPFRIVNIGASKPTPLMDYIAALETALET
TARKNLMEMQPGDVPATWADTTLLSQLTGYEPQVSVEEGVARFVAWYRGYYAS
>gi|99077913|ref|YP_611172.1| XRE family transcriptional regulator [Ruegeria sp. TM1040]
MPHPVDIHVGKRIRTRRWTVDETQKYLAEKVGVKCQQIQNYEVASNRVSASRLWDISKVLGVDVTYFFEG
FDPRQETSDTHEFHRTASQEKEAIALVQSYYKIPKHQRPIFLQLAKSLTDNTPAD
>gi|99077914|ref|YP_611173.1| mannose-1-phosphate guanylyltransferase (GDP) [Ruegeria sp. TM1040]
MIHPILLCGGSGTRLWPLSRKSYPKQFAPLVGDITLFQSSAQRLAGEGFASPMVVTNSDFRFIVTQQMAE
VGIDPGAILIEPEGRNTAPAVLAAALFLQKHDPDGLMLVAPSDHVVPDSEAFRAAIAAAEPAAQAGQLVT
FGIKPDRPETGYGYLELASKPEDFEPKVIGLKRFVEKPDLDTAKDMLRSGNFLWNAGIFLFSVESIIQAF
KAHCPHMLVSVQTALDLGEHDLGFLRLDPDAWSGAEDISIDYAVMERAENLAVVPYAGGWTDLGGWDAVW
REGVPDQDGVVIHGRASAIDCTDSLLRSEDERLEVVGIGLKNIITVAMPDAVLVADVSRAQDVKKAVETL
KAKSVRQAEAFPKDHRPWGWFESLIVGERFQVKRIHVNPGAALSLQSHHHRSEHWIVVEGTARVTVDDTV
SLVTENQSIYVPLGAVHRMENPGKVPMVLIEVQTGSYLGEDDIIRYEDVYARA
>gi|99077915|ref|YP_611174.1| hypothetical protein TM1040_3779 [Ruegeria sp. TM1040]
MTAEKFDVYSHVTNQIIAQIEAGAPPWRKPWTGGGTGGSLPERFNGKAYRGINILMLWATAMAKDYSSAR
WMTFNQVKQLGGHVRKGEKSATVVKYGTVEREDENGEERQIPYAKAYRVFNADQIDGLPAEFYILPDPPR
DLGTVADPAMEAFFAATGAQIDVTKEPRAYYSIKTDRIHMPPIATFHRATGYYGTLAHELTHWTGATKRL
DRLGRFNDRKLYAFEELVAEIGNCMLCTQIGVEPEFGQSAAYVEGWLEAMKEDSRAIFRAASEAQKAVDY
IMERTAQADRMAAE
>gi|99077916|ref|YP_611175.1| hypothetical protein TM1040_3780 [Ruegeria sp. TM1040]
MFRFTAWTSTLALLAAPVMADGHASTMGYALSGDSTSLMVMDSIATPDQVRSITLSTPVRSIAWRPVTRE
LVGFADGMIVTINPMTGETMDQSATFTDDAIIADGSVVAFDFNNKIDAVRAVGSTGENLVYFPSDFGDKR
ANSVRRFTDLFYAKGDMSEGVEPLIFANAYTNAINGAKAGGTFQYALDARANALVSLANNAGTLESIGLI
TIGGEPADVLPVGGFDIVSPEEGADAAYAVLQIDGQDTAGLYAIDVTSGAATLLADLGTSDVSSFAVSTG
M
>gi|99077917|ref|YP_611176.1| protein-methionine-S-oxide reductase [Ruegeria sp. TM1040]
MKRRTLIAGMLCSAAVPLRAAEGPFEITRSEAEWRAMLTDVEYAVMREEATETAFSSPLDTETRSGTFHC
KGCDLPLYSSAHKYDSGTGWPSFWQSLPNAVGTKPDNSLFATRTEVHCRRCGSHLGHIFEDGPQPTGKRH
CLNGVSLAFRT
>gi|99077918|ref|YP_611177.1| beta-Ig-H3/fasciclin [Ruegeria sp. TM1040]
MTFKTLVASSTAAIALATAAFAMNPTVGGAPMLEERNIIENAVNSPIHTTLVAAVQAADLVDTLQGEGPF
TVFAPVNDAFAKLPAGTVETLLKPENKAMLQKVLTAHVVAGDWSAADIIAAAKSSPDGFYHFNAVSGDAL
SAKVVGGNVFIFDESGNAGKVTVADVDQSNGVIHVVNAVLVPK
>gi|99077919|ref|YP_611178.1| hypothetical protein TM1040_3783 [Ruegeria sp. TM1040]
MSQQGDHNDDAALAGEYVLHLLEGDERAAFEARLALEPALRDLVRDWDESFVAMAEGIAPVAPPGSVKDE
LNAALFPDTVKPKRSLWSLLVGGVTVAVIVVGAVLLTPVLMQNPSFDPTFTANVVADDGTLVVAARFIAE
TGALELTREAGAARSGRVLELWLIAEGTDTPVSLGVLPAEVETQIDVSPDIAERLVNGLLAISDEPPGGS
PTGAPTGEVLAVGPVTST
>gi|99077920|ref|YP_611179.1| RNA polymerase sigma factor [Ruegeria sp. TM1040]
MQTLLTDTNDIENAIMRVGLGDRAAFSFLYDATSAKLFGVCLRVLGDRAEAEDTLQDVFVKVWHKADRYK
ANGYSPMTWLITLTRNTAIDRLRARKAGNVDIDDAHDLSDGSPTPEAEAIASSERQRLNACFEELQADRS
EAVRRAYLDGDSYKDLAARYDVPLNTMRTWLHRSLLTLKDCLSR
>gi|99077921|ref|YP_611180.1| hemolysin-type calcium-binding region [Ruegeria sp. TM1040]
MADNDSGTPATESNQTLTGTGADDQLSGGLGDDVITGGAGDDVLRGDGPIAGSWHYETFDRNFTSANGQA
FDFGGDASERTGSGYVTDFDESSLTNAIRGTTGNPGDFGVIYTSTLNITDSGVYTFATNSDDGSTIQIFD
SAGTPVTFTQGGTTADYMNNDFHQPATTRSGQVTLDSNETYTIQVRYWENQGADVLQVTVDPPGSTGAVN
INDSGLVGVPPDPDYSTTGVPAGVEGDDFLSGGAGNDTLWGDGGDDTLNGGAGDDIIDGGRGADTIDGGF
GLDTIDGGEEDDIIAGGEGNDVITGGVGDDIIFGDEFDPGAGNEYFYVGNAYIADENYTITGSGDFAGPT
ASEIQVTTDPVTIRFLDDDTSLGGDDGANEVRADPTFQRVEIDGVEYGANLDFSVTFEDPTGTVYRFAVL
DVDFDGDGSNQDANEDGHILIQIDGPAIVPGTVLDTRSGFQNISATDYDALRAATAFNDTIDGGDGNDTI
EGGRGNDAITVGRGDIATGGADADTFTLDFGQTSTDGSMVVTIDGSTTEIDGVDNDSLDLTGFGTFTLTQ
TTDTDGNSTSGTAVYADGTTVNFTEIENLIVCFAKGTQIKTSDGIRDIESLQVGDKLVTKDNGLQSIRWI
GKRTLSEDKLDAHPKLKPIRIKAGALGEGMPSRDLIVSPQHRIVVRSKIAIRMFDTQEILVPAKHLIGLQ
DVSIAAEMREVTYYHLLCDNHEIIEADGAFAETLYTGTEAMKAMSPEALEEIMLILGDQFSTRRPLARFT
PKGRQAKKLIERHIKNDRAVYC
>gi|99077922|ref|YP_611181.1| hypothetical protein TM1040_3786 [Ruegeria sp. TM1040]
MSAIEAAFLGHPTEAEKVNLSDFSKLVKGDTITVFLDNEQHAQIEWLHDRVERDLVYGAVRLKDGRTLPV
DCYLENIGCGLLFDTFNSKALKDGCSEHIQGTVFLSMPLPSQLPKRWQRSGTGPKYASFSGREKTTIEEF
VEDIKNKGFSEGPSWRGSGFDIRLPIWQTSWQKQDCDVNVRVTRKRQGFLRSAKFLVSVSDHSHRPIWKH
GTPVISEDGLLLDEAIDALLLGLDIAWSKSQEVPIIQAAD
>gi|99077923|ref|YP_611182.1| nucleic acid binding, OB-fold, tRNA/helicase-type [Ruegeria sp. TM1040]
MRHVFQFISALGVALFLTTCVNAETIGPREAAQNIGSYSTVEGVVSQVSRSRNGTTFINFGGRFPNHVFY
GVIFKKHAHKFQNLDGLVGKSVAIGGTINLYKGKPQIIVFSPEQITQR
>gi|99077924|ref|YP_611183.1| hypothetical protein TM1040_3788 [Ruegeria sp. TM1040]
MIKKSLFITGVVFLGLSGCAEQTIYDRYKAGLPAENVLYLAGATEASRNRDVTNCQVYAAQQVPQNQVIR
TSSSYTTPVQTTCNHIGTQVFCNTSGGQTYGGGTYSVDANANLRSRVYHQCLADRGYRYVNLPACPAGVV
LKNRGKLPPLSRTTCYMATPDGRSAIGEY
>gi|99077925|ref|YP_611184.1| SNase-like nuclease [Ruegeria sp. TM1040]
MRVLIAIVVVFCATSVFSASLHVRDADTIIVDGTPVRLNGVDAPELKTSAGKDAKRWVVNYLRGKSITCK
LNGERTYDRWVGICFADGEDIGAAVIAAGHALDCRRYSGGRYRNLETPSARSRIKRAPYCD
>gi|99077926|ref|YP_611185.1| hypothetical protein TM1040_3791 [Ruegeria sp. TM1040]
MTNHYVATVPVKFTDTDGQERTRFQRVGAMFRNTRGGDGSEFFSLKLDFPVAVSELVVFPPSAKDPQD
>gi|99077927|ref|YP_611186.1| hypothetical protein TM1040_3792 [Ruegeria sp. TM1040]
MSRTKRLTEIEKMQIVREAAEGVSTSELAERFEVTSRAVRYVLKADAERQMDAAIPVSAVSVKVTAAELE
ALDAVLAKAGIESRAEGLRRLIQAAGGVFVPDAQMAAEMARYRSSLHEVGNGVAQIAKQMTRANRMGQGA
VGDASTEFSEPRLAQMRGLARFILDSADEIDLLLRRRRDAMQLEATAALREFAHAAE
>gi|99077928|ref|YP_611187.1| relaxase/mobilization nuclease domain-containing protein [Ruegeria sp. TM1040]
MRLNDAVDAVTGEVFRDGWSRIRGSMQGLHVAKQSQLVRAAAGHRPAVFKAIRGGGTHTKSQLANQLDYL
TTKSTHIVDSSGFLDGKAKLEAKDIKDLTERFAKRWDAGFKPKLGQTTHMLMSFPIGTRGEDVRDIATDV
AERFFQTDEGHFDYIIAVHEDRDHPHAHLVLNRRSQEGEFFFLGRNHRFNYDAFRLAMVEEAEKYGVRLE
ATRRVDRGVVHYPARTREVYAAKEEGRAPRERERVGADLTRTLAESANTRTVYHSLAAEASREAREDIAA
ALFRAGEVLARGGQVDRTGDVYMAEDQSFEDLRSLYAEKLARVQGMIAEKSDAERPVLEKRLIEIQTQVQ
HMQPLGLRSSTLSETPSDGGIYSEANIDASQRERLAEPDLRARIDVALRGTGISTSEVVARIETGASNAA
LEHQWIADDLSKVAEARDLNLERRADLEQARDILNNVHVALGTLLEREAVLRHDGVIDEARAARVHLTKD
RIEEAAKVVRLETSISERGEALIETRAVERLEAEQRAYLQEHPDLLQSPADVIRMDEEGRARIVDQKLAD
LIGREIEAARLGAHSRTPISVAVTRDLQARYPDMPGQLAEGLGETYAHVQDARLSQREVQVLQMPELDRV
LTHERAGELSAPFETEDERDAFRTEIARVLDDRQLGRLTSGDADALEQVLGDRLDRLYVAKVYLQSDAAT
VNTEALRQVVDELADAEYEKHRATDVDGETERGQIH
>gi|99077929|ref|YP_611188.1| TRAG protein [Ruegeria sp. TM1040]
MSDAMGKARIATGILLVTLVTGAMGYTIASAVLSHQDLGFGAEIDFAYIAQNYLAILDRRPEDAQLIHLI
IGSFAAAGLMLSLALSGSALTRFGQTHWQSAREMKANGFFGAPGTGFILGKLGTPKSRAKFVCSKVFPHA
LIVAPTGRGKTTGFVIPNLLTWQGSAVTLDVKGECFEATARHRAAQGDKVYRFAPTDWEGKRTHRYNPLL
RIYQLKDPARQQMELQLLATLFLQSDNDRVQGLLKGGIDLFVAAGLLAFQRKRPTLGEIYRIAASGGNKQ
KEYFARGHEVDNRAAKLIFTRLASTNNDTLTSYVSLLMTSGLDQWQNPAIDEATAVSDFDFRTIRKKPFS
VYLVVQPLMVKPLAPLIRLFFSDLLSAMQEKDPGPDEPWPVMIMLDEFNRLGKMPIVVESIETLRSYSGH
LAVVTQTIPALDEIYGENTRRALQGNAGVKLYLTPSDEKTVEELSKAVGKTTKTVVTRSQSIGKNPFEGR
SQSTRTEESSLLPEDEARRLPLDEIVMVIDAQMPVRAKRIQYFDDRLFKTIHDAQTGDLPFPEPGGAQGK
LPLTMRAMPMAPPPDESSGPEADGKAARQTADGQSSGPSGAVPKKTAPIVQAVIAEAQRQMEMDLEGAVA
DAEAARIVDEAQMRSAVDGLNDMEAMLQEDRGQKLVGR
>gi|99077930|ref|YP_611189.1| periplasmic sensor signal transduction histidine kinase [Ruegeria sp. TM1040]
MPRVQHKLGFTDLLVALSTALWFIPTYIAAEPLKVAYTEFPPYSFTNEAGAADGFSIDVIRRVLETAGHQ
PEFVHSTNPGHTLELLSSGGADLSTFMVTTPARLEEVLATQEVGSIKLAAFTLRTSGFARSEDLAGKRIG
VVKGSASTSAARMIPFAEIVEFQQTDDLIVPLLLGEVDAVVSGQEAFTARLREANVFGKIITLEPSLVSM
PYAILVSETHADLLPNLNQALDRSLSPATIKALRESWFGRDTYLYEKPAFWFVAIAIALFTAVTGYLGVR
VLRYKREAARALRANQANDLLVNALDELNAAIVIYDQNMRAVHRNAGFAKSFPRLVPQVDAGATMADLIG
VSYKAAVVEFGVNDKSIDEFVSDVIASVEAGMDNRRLVKAKNGLVYEARDFRLGADHYASIRVDVTAQAA
LQETIVQQAEELKLVNARLESFAAIAAHDLRSPLSRIAPLVEFIIEDLDEAKIQVPQQVEEYLGLLTQQA
DAMSTLVEDLLTYASAGTQNGRPESFDPCDRLANVLKIIEPPEGFTIKTPQAMPQIFADPIAFETVMRNL
ISNALKHHGKGVGTVEVFATENLGHVQIHVSDDGVGIPEKYQNTVFEPFKRLSSTVSGSGLGLAFVQKTV
ESWGGSISLSSSPGEGCTFSITVPRGQQVEHILAS
>gi|99077931|ref|YP_611190.1| hypothetical protein TM1040_3796 [Ruegeria sp. TM1040]
MWRVVGVERRRKPFKTYRDPEKEDNTMKRFALTTAAISALMAAPAMADLNSAGAQTFKEMQETYPAIDRK
IFEQVDVNKDGVADMAEVDAAEQSGVLNVDMSAAEASGTYDPSPYGVEEAGALTFAELKDEYPSLTKKVF
EEVDVNKDGVADMAEIDEAELSDVLEPGIGNTAEGQSYNQG
>gi|99077932|ref|YP_611191.1| hypothetical protein TM1040_3797 [Ruegeria sp. TM1040]
MLPGTVYVDRPGTGIFAVELGPSGAGALLNERGKRELEMVSYGPRQICLQEECVNVQIEDDRLALYKDNS
DRLEGFLIYIALGRFTSPLPLAPVKDAQQSQEIANVDVSNAEAKLDIYDTAESTGKAMDEALASEACTDG
ALFYGTSDCKAAMERAVSQDIGRIVSSATGPTNAENESQPVLDLPEVEYLWFGRSADLQVQKLGTRDKRG
QTRVDFENGSPRIGGRILIPSFVPDSARIVAVSEALALIRFSGSLLPKGCVEAYRWLWVQASDHGVLSEP
FGACTAAEDVEVHYEGSRVVTTITPEEGIPSTFEIFPYRSDDIDPLRVSVTSGPSVDFEPVSEEDWKTIE
RRAAEAQRIATAEAAKEEAQIREADMQAEKEAALARRRQPATPTGKLDDGNVFDILAQDSVQSAIAASDD
AKIIQKALSDRFYETVYLPHNKHVGDIYVGLSCGPSGCAELMAGAIYNRVTQDAFGFVQIDFETYRFGSE
GWLMADPSAQVVTDTLSKMVKAIPAE
>gi|99077933|ref|YP_611192.1| hypothetical protein TM1040_3798 [Ruegeria sp. TM1040]
MFVSAADGYSALAKELHRQNTMKFMTILAALALTLSAPAFAQEAKGTEKQSAPESAADTQERSTGNGRGT
RNTASTTRNKTPLL
>gi|99077934|ref|YP_611193.1| hypothetical protein TM1040_3799 [Ruegeria sp. TM1040]
MKIHLNEPDRLILRGTTSAISAVLCSILLVVVGLSVSAAIAGYTASWGVAAGAVCIGGGILWLVYHKTEV
VFDRASDVLTLRKTMLHGTREDTITLENVKQADVDLKRNERSNNRLHASYTYRLCVVTGAAQNRHRVALS
HGYTTSRRHLVMAQKINDWLGVPDAPIAVGPSMADVAEVIKTLGFGKST
>gi|99077935|ref|YP_611194.1| hypothetical protein TM1040_3800 [Ruegeria sp. TM1040]
MSQFTETTQVGLFARLKNAIKGIGLGISFIGIAVYFLFWNEGNAVRTARALAEGANQVVSVDHTAIDPQN
EDRLLHIGGPLALEVPLADVALGVVASAQTVRLERKVEQFAWIEDKQTKTETKLGGGQEKTTRYTYRQGW
TDAPASGAEFRVPEGHMNPPMPIASKVIRQPEGTIGAFTVDDEISDLGGSTPMLLDSQQAEDVARALSLQ
QPAKLVAGQVVFGADVTAPQLGDIRVSYRVSEIEEASVVGVQRSDTLLPYTAQNGRKIYLVAEGLKTADE
MFQTAVSNNTFKTWMLRIGLLVLLFLGFKALFGVVDVIASILPFLGWITASVTSLISVALTLVVGGTTIA
IAWVYFRPVLALLIIAVALAGAAASAYWLRKAAPETPKTP
>gi|99077936|ref|YP_611195.1| hypothetical protein TM1040_3801 [Ruegeria sp. TM1040]
MKQIYLSIALMFGAGALQAGQFCELDGTEMFTCTLKGGTRGVEVCNAVWADGTKAAYGFFKSNGAVEKEI
LQDMATITASPWNGMGNFMTESVTFDAGGGYAYEVWWGSERAADATEMGGVNVLKDGALIADIPCDAGSV
NSDLSSLIELIEAAQ
>gi|99077937|ref|YP_611196.1| hypothetical protein TM1040_3802 [Ruegeria sp. TM1040]
MLPRTLSAAVMMMTATGWSGTANAQPVCGGEVLFQCATDNADFREQITVCAKDHSYILTRHALASGEMYY
DTPLIADANTTWFSWSEDDQLRLEIGFWSTDLAEPVTLHASLPWDDMEETLAATGEYSMWLQSPHWRAQV
DQTLCAPETIYADPEALWGAQDTRGPIAAFFSQDEIIPRVNTVGVARVADTSGHLEGLPVYAAARPSAAT
PIWWMLQPGDIVDIIDRENDFVAVAIPTLGMTECFLRPEALGQPYNGPCATGWVDGAYLQQIQ
>gi|99077938|ref|YP_611197.1| hypothetical protein TM1040_3803 [Ruegeria sp. TM1040]
MWRVVPFASSQAHAPRLFKEMTMKALVLTAALTCTAGTASALCEDAWYLRNMAFDRAGYCFGSALGKSVF
SAECSTKSPSLNDWDQRMVSAHKQLEASYSCKINTKGRHLASSLVGKLDDIDLLPTLSQFESSCVGYTGA
PVTLTSGIGMRDSYPTGTIQGGATVHFRFEPWGGFEFVETETGAGWIPEGSVTPDVCTAFAG
>gi|99077939|ref|YP_611198.1| hypothetical protein TM1040_3804 [Ruegeria sp. TM1040]
MRSKLLCFLAFAPVVGHAECLPPETQALSCTLPSGGHLELCWTPQNARLAFDKEPGVPAEVSVPLGNVTG
LTAADWASSTLRGVGAGYEVYVSGQVAGMNLIRDGGGTSSYTCATGTVNGSLAELNEAALYAPASKEN
>gi|99077940|ref|YP_611199.1| hypothetical protein TM1040_3805 [Ruegeria sp. TM1040]
MRSFLTKFGVSLLCSAGMAQAFCDDILATQVLCLTEDADEIKVCSSQHPEIGDPVLELHVTPQISDGPIY
RLAADVPFGMAPGTGGFPWDVHEFSFLHEGGRAVLSVKTPMDTDDTSDAEIWLDLFGRGTAPDRSLSCMQ
PALSAEIENLLALRRVSMNTMRTGPSADSAPFYQPSKPISGATPHGSYNCREVAGVLSNEGTENGQIALF
AAPSDEAAILGYAFPSDLGSAFECVSEDGFSGIIWVDPDKGDGAGGYMTQLDYEARLAACSMTADDWPQD
RAYWGNCSSAWVKQGNIAGFGG
>gi|99077941|ref|YP_611200.1| hypothetical protein TM1040_3806 [Ruegeria sp. TM1040]
MKRYFIVASFAVCAAPAFADCEGGGTQVFYCDTENASRVQVCLQNETVQFLGGPDLSDPVYDLSMPVQFM
PYLSTGIAQSEEDFSYIRFYEGERVFTVGLDRDLEFASAALGLASDFLPANEEACNPDSIVDNFQVLDQF
ALTTGRVAPVVSFPEVSPNCGPIHDLRPADWMEDKSVTPIHLGPEEITTEVIPVDQNVRACGAPVEGWQG
VRFQSYGFECDLNAPDAIGAVCSSGYVRLSQLAEISGPASELSRPQALACQAGGFRFVMARADNGAVTIE
NEQLRMTLSPGSGPRTTTDTGSEQVMRLNDKLKLSVSYDTLELNVSHSEQGQQSGICVPVDLS
>gi|99077942|ref|YP_611201.1| hypothetical protein TM1040_3807 [Ruegeria sp. TM1040]
MAFNRALATTVALILSHSAVSAADLAIIGGANFSQSSAQIRATFEAEGYRCERMGVMDPDDGKLDEKGCA
LWKDEFSFSSSDTRVMWTMRYQKDNEMRILVLGEQQGLDRVLMLGQATFFEDAAIEMSSSEFLEDRLAVF
FEVTPTFGTFDTSEDALDLCFLMTEDITVLTPAGLPSSALEENQRFLGSPISPAAILCERWMNRKRDAVV
DFARSDAGPAYARKVVYYADGGKPQQYMDMLWNVPAVVGWSLAPLQVEGK
>gi|99077943|ref|YP_611202.1| LuxR family transcriptional regulator [Ruegeria sp. TM1040]
MYAPLDLIRDITDAPTLDAKYKVFSGFMEAEYGYVGVNYGLFLDTRSLHAIHNNHVSKRSGLPNEWREIY
QRNNYALDDYGMRMGALTRKPILQSSFYRALDANELPENFARVVGGVRNFVSSGVVIPLQANGMRGIIGL
FDPSGDILKHDARFERDRTTIQTLANYLHMCSDWSDDIIVQMGLSEMNLKVLRLKAQGLRMKEILYEIQR
DNPKTIHSHMQRVRRALGTRNDMETVQRAAKLGLLKEDSFPVHQVSPQLYDALGLR
>gi|99077944|ref|YP_611203.1| TrbL/VirB6 plasmid conjugal transfer protein [Ruegeria sp. TM1040]
MSVVTYFVETSQGYLDTAAETQFGSVAATVGTLLVLGTTLVVILVFVNMIYQYKAMDGRTAFWLAVKIGL
IGIFATNWVQFNALSSAILAGIDSIAGALVASVGGGTPGPSGTFSEEFDRLIAELGDYLNAAGSELNWMA
GAMLDIVGVLLLSILGGLAAFILVASRLMITLLIGIAPVMIFLTLFEVTKDYFARWLSALVSFALYPIVV
AGVFATITGVSSALIGELGDPEGAPNIGALIPFFMMVLMAKGFIIATPFIVRAISGNIMMPALSGGLSGG
YSFARAAMGSQQAYNRYLTGGASGAEYAALRARQFFGMQALPSRSNSAGRPTDVPASSVTGTGTRMLAQL
SRLGRLGKR
>gi|99077945|ref|YP_611204.1| hypothetical protein TM1040_3810 [Ruegeria sp. TM1040]
MRQVGCTLVVTALVLGLTSASGFAERNLVPTLERSFDVCSDRPAEPVWMQEIPLRQAYQRVLVQDIYRAM
NLERIVETESCDCETRFPSWDAAEAEFHEQHASDERWKMLEASDAYNRRANDVRLEAKAICETAGNW
>gi|99077946|ref|YP_611205.1| hypothetical protein TM1040_3811 [Ruegeria sp. TM1040]
MKTFEYDILSFPLTRKTSLADMRVSLSVKGAEGWEVVSISSSEFANVGHTVFLKRETTPAGATV
>gi|99077947|ref|YP_611206.1| type II secretion system protein E [Ruegeria sp. TM1040]
MSLSYLQTSLDRIDAAARDDVIEICINPDGSCWGEFQGDHFMRKLDQALTATEVKDLGNQIASSANTTMS
KDRPIVSVSITYKGRPIRAQVITPPAVLSAMSISLRFFSSLPLDGIALDFLYGKERKLEKLRLKKTRELR
EVVAAGVIDDALAFCVDNKLNMIVSGGTSTGKTVAARKILSHVPADERIVTIEEAAELLPTQPNAVTLIA
NRDAEFQTADVLLTATLRMRPDRIILGEVRGKEAMTFLEAINTGHGGSMTTLHAETPQLAVQRLAIAALK
TEIPMTYADMIQYIENSIDVIIQAGRHDGRRGITEFYLPGATEIGVSQ
>gi|99077948|ref|YP_611207.1| conjugation TrbI-like protein [Ruegeria sp. TM1040]
MSDTGNADLEKRLAALEQGKGAGSPPAPRRSPLLALVVVLVIGAGGALLYLLSRPEEEEALLTATPDVFQ
NEGDGFGAIETLPPREPEVVFVAPDPIEPNAELLARITALQAQIEELRNAPEPVVEEDTAAAEAIDALTA
QIAALQTASEAAQQQFRDELTARDRELEQLRMDLELAQLEANRPLPAPIGPTEDELRAREEERLRREEEA
RRLAELERRAAEERAFQERRITSPTIAFGGTSGANETALTERTFGEVTDFVLNGALPSTVTQAEVIANPS
NTIIQGTMIQAVMETALDSALPGQTRAVVSEDVFSFDASRLLIPRGSRLIGRYRSGVDIAQRRVTIAWDR
VILPDNQTIQISSFGGDELGRSGVTGFVDTRFDERFGSAALISLISAAPSAAAANVQDETAADVLEDVGD
DLADATDSVIGDYLSIGPVIYVDQGARVTVMVDRDLEIF
>gi|99077949|ref|YP_611208.1| conjugal transfer protein TrbG/VirB9/CagX [Ruegeria sp. TM1040]
MFPVRLFFLLIALLPGLALAEAIPRGGPNDNRVRLATYQEGQVYRLNVSLTHVTTIEFGDGESIRSIIAG
DTEGFEIDGVPGGQAFAIKPVARGVHTNVTVYTSRRSYYFNVQEVRSPTFYVVQFRYPEDDTRPTRAIAA
QAPNYNYGASARTEFTPTRVWDDGTFTYFEFPRNAPVPAIFRYANGRERTVNTQATENGVIRVSGVNRQW
VLRIGEEVVCIEATPPAGVGS
>gi|99077950|ref|YP_611209.1| VirB8 [Ruegeria sp. TM1040]
MASEQEIIEEELVYGALRRERLWQRLGLIGLIFGILGCLSAATVAILDVDPPPVVVPYDPATGFALPEAS
VGASSVTANQAIIEAEVFRYVTDREVYNQLDNDLRIRSVLRRSDGAAESRLRQIWNSANENYPPTVYGPN
ARLDVEILSINRIGTNRATVRLRKRLTSINGVQTGLFTATLLFEFRPETRRSIDEVWTNPFGFTVLEYSI
RSDRLEN
>gi|99077951|ref|YP_611210.1| hypothetical protein TM1040_3816 [Ruegeria sp. TM1040]
MRDLLVRMALATTLGIGLHLGTLSAAVAQGVPVVDTQNIAQNIQQLRQMIEDEILQNEQLTQLREQLATL
TDQLAELQRTYEALTRLAELPEIIRTEMEDELNGLLDQEFGDILATIEAIKTGDFSDLSGSGAGEIETQM
DRVLADLGFDDDTLSEMATSGNPGANRVATQATTGALVSAAAQNSYEDAGQSLERVDRLVGLIDDMDELK
ESIDLNTRVTAELAIALVAMWQLEAVQTVGDGTGGVIDAATIAEEQRFMDFTLPELRAD
>gi|99077952|ref|YP_611211.1| lytic transglycosylase, catalytic [Ruegeria sp. TM1040]
MKSKLPHILVLCLLPEIALSQGVPTNDSGLTARDIVETGDREADLAIQANKLSVRELIAEIEREQLETLQ
RILDAQTSFGGQGLPAMVSGLENGSGDPARSVEAVYGNAEIDPNPGGAQMFGDAAENIEQLIIRVAQETS
GFAGVGRAGLSPVQWRALLQALIWQESRFTIGARSPVGAFGLTQIMPGTASDLGINPEYYDSPYLQVHGG
ARYLATQLNTFDGNIINALAAYNAGPGRVFEYGGVPPFRETQHYVQVIPERYNLYLGRIGGIEALGTIDP
ALLANANLSLTGHGAAFYGNNSPAAIRQAALRIADIVERISDTEDVQESIALNTYARAEIVRLVAARVRL
QAARTRLLSAEELAQASARMAKGAFMDFTIREID
>gi|99077953|ref|YP_611212.1| hypothetical protein TM1040_3818 [Ruegeria sp. TM1040]
MIRIFLALAALGVLASCAQYQEPKANCFTFLASTAPVAPDCTFTPVGAPEGGIEV
>gi|99077954|ref|YP_611213.1| CagE, TrbE, VirB component of type IV transporter system [Ruegeria sp. TM1040]
MPRDDARKDALDLRTMTPDWYSRETRLAHMLPYVSLVDDQTVRTRVNELFQCIRFDGVNSYTTDDTYLDK
VTALFARIIAQLGPEFSYYVHKVSKAIKPDLDPIRKDSFAGEVDRLWRKKLETSGLRDKTLTLTIIHRPP
PKSVLPFLNRSAPNRLKKATEKRLRRLGEAVNVFLSGLSELNPRILSAETGELIGFLGALNTGQELPLYP
ANTYGFLSFNAANTRVTFQGDHFELSEGVVGHRYGKSFTIGEYSEGTSCTMFDMLNLPVDMIVTHSFTPI
NSNLMAGRIKRQKRQMQASQDAALSLMEALDIAADDLEAKRQSFGEHHMVVTIFCDTLDELQTLSAEIVN
AAAAEGVKMIGERVAAKAHYLSQHPGNQPKRVRASAITNRNFADFAAFHRTQLGKPAGKTPWGKVITYLP
TPEQSAYRFSYHEQGSPEKEPTSGHTLIMGRPGSGKSVLSAFLMTQARRAGARIFVFDYRLGMEMAVRAN
GGRYASLKAGQPTGLNPLWTETDARGTAWLSDWLATLLYRADKPLTPAQTNRIQEVVRQNAQATNPALRN
WRDFASLFVSTDDGGDLHQRLLEWTEEGRYGWIFGQTLEDTFSLEGDVVGFDLTGILDSEAEKERMAVLS
YLFRRVEREIEDRRPTIIVIDEAWKALDNAYFAERLSNWLVTARKQNTVAVMMTQYASQLERTRTGKTIV
EAVPTQILLPNIRAHAADYAMLNLYEKELDVLLNTGSDSRLALIRDDQGSIVVDADLSALGPNLTILGGM
ETGEALVGSDYRNRPDFWRLS
>gi|99077955|ref|YP_611214.1| type IV secretory pathway, VirB3-like [Ruegeria sp. TM1040]
MRPPKLLGLPIMYAMVWLFGSVLLFVWIQHIVVLGVTAFLYPVLWKAADWDPRFIDVMMTALQETPPTRN
RSIHGGDSYAP
>gi|99077956|ref|YP_611215.1| VIRB2 type IV secretion [Ruegeria sp. TM1040]
MKHISHLFVASLALFLLIAEPALAQSIDLSPIQSLLQGIVDALTGPLGVVIATLAVLGVFLSWFFNIIDL
RQALWVLVGIAGVAAAPTIVAAVFAGG
>gi|99077957|ref|YP_611216.1| lytic transglycosylase, catalytic [Ruegeria sp. TM1040]
MVLVMESDGSLTPSRSQDSFARNYNDGIGQESAADELAILGETDLGPDEIQLAALARPVPLPRADVLTAI
ETTALRYAGHPGLRRAGLSVTDWLALYRANIEVESAYRQDAISSAGAIGLGQLMPATARDLGVDPRDPLQ
NLDGSARYLAMMLQSFSDPRLALAAYNAGPEAVHHYGSIPPYRETQNHLTRVMTVVARLKAPNS
>gi|99077958|ref|YP_611217.1| hypothetical protein TM1040_3823 [Ruegeria sp. TM1040]
MNWDIEAPNVVTEARFRELVESGYSAEILCQESAHKKGPSYYGVWIMRAVSDEGIEKLLVTARTRTTYND
IKIREFKTITGVVSFLIGIGFSHADVPLEEGQRTTHKLAATDKGGSK
>gi|99077959|ref|YP_611218.1| hypothetical protein TM1040_3824 [Ruegeria sp. TM1040]
MIENLRLFLSAIARLLAFLIPAMVAGQAGSCLAPVRPFVPSDSQASSDFADIIRRDFEAYIKDVQQYFHC
LERERARAFEEAGEVSQDYGRFLELVGD
>gi|99077960|ref|YP_611219.1| hypothetical protein TM1040_3825 [Ruegeria sp. TM1040]
MVHAESVSRRINVVELIAFSRPIGFDPFKILAIVEAATESDHTSENEEWLSCPTSAALSLGGFRKDQLVY
TLVGKTCELMNVVYEYANSLAPRCGKSLSIE
>gi|99077961|ref|YP_611220.1| hypothetical protein TM1040_3826 [Ruegeria sp. TM1040]
MNEKHGDGIAIANLIGTDGCSIVGWVYRWSTGGHAVMWGVHGPKPVSAIWPDISHEQKLEIDFDRLKRIG
GGEGG
>gi|99077962|ref|YP_611221.1| hypothetical protein TM1040_3827 [Ruegeria sp. TM1040]
MPSDTLALVSTRERLVFAVKWGASAVQIMGYTATGFGWTPWNLYLFLFGVVGWFAVGALWNDKALMLVHL
VALGAMIAGMASG
>gi|99077963|ref|YP_611222.1| short-chain dehydrogenase/reductase SDR [Ruegeria sp. TM1040]
MTVEKVALITAGGSGMGANAARKLADDGFKVGILSSSGKGEALGGELGGFGVTGSNLDGEALNELVEGAK
DRWGRIDVLVNSAGHGPKGPVLEISDEDWHQGMEVYLMNVIRPTRLITPVMQAQGGGAIINISTFAAFEP
DPLFPTSGVFRAGLAAFTKLYSDKYASENIRMNNVLPGFIDSLPETEDRKARIPMGRYGFASEVSSLISW
LASENGGYMTGQNLCIDGGLTRAV
>gi|99077964|ref|YP_611223.1| LysR family transcriptional regulator [Ruegeria sp. TM1040]
MTELPPLNSLRAFDAAGRRLSFRAAADELGVTQGAVAQQVRQLEAHFDVVLFERVPKGLAFTPVGRSYHN
RIAGVFADLRAATAELKPEPNKVLISVTPTFAAKWLIPNLPDFATAHPNIDLRIMATEKVSSFHSDGIDL
AVRQGSPPFGASLDVTLLFKQSLVAVAAQKLADKGGTPLDPETLAKQPKVHDAHDLWPSYLAHLGVQDQS
ARHLRLSQTSLAVDAAIAGQGVALVSRFLVAHDLAAGRLVEVGEAWAPDRNDFYVLMPRTAKNNAPTTNV
LTWLKSRSAKDT
>gi|99077965|ref|YP_611224.1| hypothetical protein TM1040_3830 [Ruegeria sp. TM1040]
MYAGLLSRRFRSMHYLIKKLLPSVAVALTVTGLSLPTPARAQTYPIDCAILLCLSGGWPASVPCARARAE
FIRRITPWPVEPPLQIWRCPMGASYESDRQSNNAGRIFEALYRPDSRQPLQSLRVDDVIPTDRALRLVQD
RADIDISGPEFNFVRSIRIFDVRYARQHESGRNSDCNRSATVVLGTYGIQGDFSWQRSSITALPEAHVGL
ERWGQNCPGIYHRSVFVDWRDYEGNYGFEQVNY
>gi|99077966|ref|YP_611225.1| glycosyl transferase, group 1 [Ruegeria sp. TM1040]
MSSPNTMVKPQIVFDLTEVLLASTGKLRYYGIARVAAEAGIALRKLDASIRFAVFSQGHRGLLEVFPEIR
EDGSVELNVPAGIRQIRMRSHHYSRSKLRDLILSAIRPLIDRKNRLFWDEIAPGMPQIEMAGKTFVTCSR
PKVITEILCAMAKQGVSCDVIPMLHDMIPLHDFHHQRASFPKNFVGDNRFVIERAKGLLSVSEFTRQEII
DFSQSDVLPAVPEIIAVPLVHQCPIGTEPAEQAPPDTPYILTVGSMLGRKNLDVVFEALRVLQRTGSPLP
KLVLAGAPRGRTRTYVASAECDSIRDLVLFYENPNQTDLVTLYENATAVIMPSRMEGWGLPAGEALWCGT
PAICSTAPVLEEVCGDLGLYFDPDAADELAEYIRRLLTDSAFSTKLRMRISEHKSKLRTWDNVAEDIVAA
VSRLSR
>gi|99077967|ref|YP_611226.1| glycosyl transferase, group 1 [Ruegeria sp. TM1040]
MQTYYFDITDIVLYVKKETTISGIQRVALEVIRRAVGKLGSERVKVGMWDKGSQSYLAMDADFLLEREEF
DPDFLAAALLGKAVRKVQTVPSILTRYRNQRAKYLYHWLRANLEEYKRNHRYFERRGTTLEGWVLEKERA
HRNSKELPVLAPAASVQKRVPLEDVAQSGDRLIILGATWGLQDLNDHLIELKEKLGVEVDLLIHDLIPLV
ASEHLADDFSETFYRWLEGSTLYCSRYFANSQNTGKDLRCFLSEINSDLPIDVVPLAQALGDGPAALDTQ
SFRSKLNATKGVRRSFLNMTKVPYVLVVGTLETRKNIWRLAQAWQQLIQDPQVEPPRLIFAGKKGWYIDE
FLDWMKASGNLDGWISIADRPTDKELAFLFHNCVFTANVSTYEGWGLPVGEGLSFGKTGVVAENSSLTEV
GGDMVEYCDAHSISSIRDACKRLIMEDGRRTELEQRIKNTQLRSWDDVTNDLLEYLN
>gi|99077968|ref|YP_611227.1| Type I secretion membrane fusion protein, HlyD [Ruegeria sp. TM1040]
MDNLQMRDKISRYSSPQRFSRIGYAIVILTFGVLGGWAAYAQIDSATVAPGIVELEGNRKVVQHLEGGII
QTIHVKEAESVSQGDVLVTLESVEARSNVERFRNRLEEAMAIEARLLAEQALSEEIDYPESLTSNPSPAL
KNVLDLQSTILADRLAIFRSEQEILQFRIEQLEGQKAGLALQKDAYERRLKLQSELVERLTRGAESGVIE
NNVLTGRKDALIQVEASLGEAISDEAQVGVAISEARLNRLKLSQEFKERANRELRDIQTDLKEIRENLTV
AQDIYYRTEIRAPSDGVVQDIRVTTEGSVIRPGEILMEIVPPDDNLLIASRVSPLDIDNVVPGQESEVRF
SAFKAKLTPVVLGYVESVSQDIITPERSDEEPYYLARVRVPEENMSEEMRQGLTAGMPADVVIVNGERSV
LNYLVSPLTDAIALSLKEE
>gi|99077969|ref|YP_611228.1| Type I secretion system ATPase, PrtD [Ruegeria sp. TM1040]
MKSGSSLAQAYAKYRSILAATVVFSFFVNLLMFVGPMYMLQVYDRVLASRNETTLVMISIIAVALLISYG
LLEFTRSRMLVRAGLQFDQVLASPLFSRVVRMQLANPASSGRNALSDADRVRDFITGQGVLSFFDAPWTP
LFLVLCFAFHPWLGAVATVGAVIIFALALLNEFMTRQSLQDANQAGAAASNFAGATLQNAEVIRAMGMVD
QLLNRWLGKRDEMLAAQARASDRAGIVLACSKFVRMTLQVAILGVGAYLAMKQQISPGIMIAASIVMGRA
LAPVEQAVGQWKQFVAARQANDRLKKLFDSLPDETDRTELPSPKGKVSVAGLTSALPGVKEPILKGVSFD
INPGEVLALVGPSGSGKSTLIRHLVGVARASVGKVSLDGTDLQHWDPKQLGHSLGYLSQDIRLFGGTVAE
NIARFQEDAEDSEIVAAAKLAGAHDMISGLSNGYQTEVGDGGSQLSGGQRQRVGLARAIFRLPAVVVLDE
PNSNLDSEGEAALAACLEQLKAMGRTVIVATHKANLLSLSDKTLILNAGSVQRFVPTKELLQPQPPKAAH
PQTVSAVTSR
>gi|99077970|ref|YP_611229.1| hypothetical protein TM1040_3836 [Ruegeria sp. TM1040]
MCRCTGGIRAAQDALQPLEAVERKGHLRADDGRSRHANMCVLAEHSGVSRARNFKIIRGKIWRFTTTINA
PQSCEPQNQMMGLTKKARAARAARYRTTPEVRALIRRSEMPLLANADL
>gi|99077971|ref|YP_611230.1| hypothetical protein TM1040_3838 [Ruegeria sp. TM1040]
MNDNPTVTVGGKECLLENLSGEARAPLANVQMADQEIARLNTQLTLVQTAPNAYALALAVELPKN
>gi|99077972|ref|YP_611231.1| methyltransferase type 11 [Ruegeria sp. TM1040]
MSDWTAGYVADIGYTYGYYTELNPVRIQLAFLNAGLAPPRVGAACELGFGQGLSTNIHAAASVTTWHGTD
FNPSQAGFAQELATDCGNGAQLFDQAFDEFCAREDLPEFDFIALHGIWSWISDENRAVIVDFLRRKLKVG
GVLYISYNTLPGWAGFAPMRHLMTEHAARFGTNGQGIVSQINGAIEFGAHMFDLDARYTKAVVGAKERFD
KLKEQDRHYLAHEYFNQDWLPMYFADMARWLEPAKLEFACSANYLDAVDLINLTQEQQDHLAGIPDPLFR
QTVRDFLVNQQFRKDYWVRGARQLTALDRSEALRECRVILTVAVEDVPLEVTGTLLKATLQDAIYQPILK
VLGDQKPHSLGQIEAAVASEGVNFAQLLQAITLLIGAGSVAPASDAEASSKRKKQVQRLNTKLMLKARSS
NDLRYLTSPLTGGAITVPRFQQLFLLAKQNGQKIPEDWAKWVWQVLAAQGQSLVKGGKTLQTPEENLAEL
TTQAEEFETKALPVLKALQIA
>gi|99077973|ref|YP_611232.1| hemolysin-type calcium-binding region [Ruegeria sp. TM1040]
MAFWEGQLSSGAVSAADAIDAIIKGATTAPDSTILTNKNAVGLDFATDAGNTPGFTFDLNGASGSAAKNA
LAGVTDDAATVTAAQAATDAYLSGVAGAGDTLSLTTGVDNITGTVNQDTIKAVVGAGATLSAADVVDGGA
GTDTLELVDATGGQSLAAALLNVSNVEELSIRSVGQAKADTSGTAFTSVNITQATSVDADVNAATNVGVS
GVTGAIAVDGGKDITITDANDGANITVGGATAVTGAVTVTDTKVGNAAIEVNGGTTVTVNATGSSANNIK
VGGATTTDQPSGAVSITSAHAATAGKDVTSSAITTVGGSSVTITSTADTSKAAADTKGATLTQGDVSVTG
GASTTEVTVNQAANVSKNAAVVAVAAKASTQKLTFTNAAANDVITLTFDTGDTLVFTASKALTATEVATA
FANLAKNATEGSAPVVNGVYTNGGTIDQGWTSGAVTDVNADDTSASVTFSNEAAGPTALVVANGGTGTAT
AATLAAGTAATAAETGRLGVIAGKVTIDGNITGDDVLKTVTIDAYEDGSTVKSDALETLTLKNADEDIVV
TTASTGAITLNLDAVAGNDAKVSLDGNAATVTGLTINATGTKSDAEVTADAATTVTVNAAVDMDLTGSSF
DKATKMVVTGAGKVTLDGDDVASVLAEVDASGATGDVDASGVALTAAGVYTGGSGADTFTVTAAATKAST
GGDGDDVITVSTLGTGGSVDAGAGTDTLVMAADDAETASATAGFKATNFEKLSIGAVADATAGADTETVN
LANLAFTEVTSAGAVDGDEDILALTNAASGLTLNITGEGLFTVGVKDAATNKTDVLNIASNSDGNLALGT
VTAANVETININAVDKVVDTTGATDAFGAAIGDGKDDNNSVQTLTVDAGAATTVNVSGSADLDLTVNTAT
ALTAVNASTATGAVTYTANDGTTTVTGGSGNDNLTAAGDSDVLLGGAGNDKLTAATLTTLTGGEGNDTFV
MSGAVDATKYSTITDLSSGDTIDTDATAFNSSKVVLAANATFAQYLDAAIVATAAQDDAASWFQFGGNTF
IVNEGTDASVTYNAAEDGIIGITGLVDLSAATFNATNGTFDIA
>gi|99077974|ref|YP_611233.1| hypothetical protein TM1040_3841 [Ruegeria sp. TM1040]
MKRPESSGTDTGFLLLQAFCFGRSCEVCCDCVCVTPCLNLIDPELQACRIWSTVEISDIERDEEISVFST
DCHGLFSYTHFIKQETAQHAPPCRHAAHAFKPPHCEHWGRKGRMRA
>gi|99077975|ref|YP_611234.1| XRE family transcriptional regulator [Ruegeria sp. TM1040]
MLLKQGIHTSDAARDARSDMGLWLKSLREQQGMSQRDLANALNLDYYTFISQLENGRGRIPPARYRDWAA
ALQVEPKSFVKKLLSYNEPLTYEILFGDAV
>gi|99077976|ref|YP_611235.1| hypothetical protein TM1040_3843 [Ruegeria sp. TM1040]
MNNVLPFGKKTHSSLSENTQDVLDLSTLTDGAADFSTGMVDRSSGGLSHLPNQTAVTPDWANQEIASFMR
AHRLLAIAGLSLETERGVTDEGDPWFVFVNQDGDVFAHFARIGEVYILDSIIQQEITKARSLDELISAFA
ETTTPVDSVDHASTSATVVPFIALRESKVRLHPGATLAALIWTIYIQSGELAVPSFSAALDVTATSKADE
VTTLPSQTRASPSEELATSTSEDNSADLKSTEKDTHTQTPSSAQVAATFTTVQTVGMGLSAIAISNGMYF
WVSGETLLEQATLASQLVAEVIKDISDEETEQLADLSELDSVLSTVRAAIEDSSEAMALAQSPIRDIPTV
DLASMPAIVANAVENGKVGNAIKAKDVQGDVAFSEEMDGELIKFRDIQANRPEEIETSQIRSTPVDIEKK
YILQELDEVEHFSLTSDAFSNIATQLSDLPFFTQMLSGSFQAVVASEGSQTVPASRPDTLNDASETAPRF
SIFNDDAHNFIVFLMSKGDETKRSDYDNEVVLFDFDAIDSQTDAIYARSWSFEDGSVISAVGLKSDFAAF
DLVI
>gi|99077977|ref|YP_611236.1| hypothetical protein TM1040_3844 [Ruegeria sp. TM1040]
MVKSAKLRIHWISPVPPAETDIAHYTHRILPELAEVAELVLWTDAAEWDWNLHNIAPVRHLDPDRVRPRD
FALSGRAGRGPEPGPEVVFVNIGNAWPFHAGFLRMIQRLPTIVVLHDMAIQELCFDAMERSLLDQDVYLE
NMRRSHGQAGVEAAKLVLGDEMEAGALARTYPGFELALTHAVSVVTHSRVAQQSVDTVSDTPTYLLDLPF
RPSLRRPEVYRSGLGPLRLVQFGYTGPNRRLESVLRTLASLKHEVDFRFDVMGKLWDTGYLRNLVNQLGI
EARVTFHGFVDESFLDQKLQQAHLVFNLRSPTMGEASGSQLRIWNACAASVVTNLGWYADLPDETVFKIN
PDREAEELKSIVRSLYADPSRGNRKALAGRERLEQIHNPARYAAAIKKVAQNFSQDAAHSLLGSRCSFPK
CRTLDQR
>gi|99077978|ref|YP_611237.1| glycosyl transferase, group 1 [Ruegeria sp. TM1040]
MRVGVLRTQVPFVSGGAERHSMGLVNALEARGYEATEITLPFKWYPGNVLADHIAAAKFLDISEVEGVKI
DLAVGLKFPAWLAQHPNMVLWVIHQHRQAYDMWEAGTSDLLDDPQGEALRALIHEEDRAAFLASPHPIYA
NSCNVADRLKRHLGTAATTLYHPPPNAELLRQGDYGDYLFAPGRINASKRLELPLRALVHAPASRLIIAG
VAENPAYQKRLYSLAHELGVSGRVEWLGRVDDETLVRYYANARGVVFTPQDEDYGYITLEAMVSGKPVVT
TKDSGGPLEFISDGIEGLVVDPDAKALGDAFTFLSEDTATAERMGQAGYMCYAQCNISWDHVVSTLTGQA
HLPVTFDAVQKIDAQAPEHGHEVCTEDAVRQLRAAVAPPSRPDNVPFANINELLEAYAFDELPAALGRDE
PPIDAGLSGYLGTHWTRFMSTLRQLEGLEISSALDVGVFPPLVFQALLANQFPNIDLHGLWEGPNPYAQS
VRPRPGYDVDGFEITLKVANGERDPWPYPDETFDLVTGMEILEHLALDPYFFFCEAARVLKPGGNILITT
PNVNSHRGVWKTLNNVAPYSFGIFVPSGGVYGRHNREYAPTELDMLGRSAGFETVRLQTFDVYDRHIEPE
LANLLVSRRDNLSLRGENIQYLAKKVGSPKGVPQSLYHGDPARMHGELQVVTHEEETGLLTISVRNTSYS
IWPLEGDRATCVLAEWVDEAGVLRHQHLMQPLTEVLSPGDEGRIRFTLDAQKQNLGVLRLHLYQSGVGVF
SGRGRAVPLSIPCSHSAFLTLVDKTPLPRAKV
>gi|99077979|ref|YP_611238.1| methyltransferase type 11 [Ruegeria sp. TM1040]
MKVIKRLERYLSAAFSLGRIKSMSKDAQREIAELRLELGTLSQELKHTRQETERMWAWMRRHEALADDLV
SVSRREAEVLKRTGQSDTALLLRMFSDLSRRIDGGESGRPDEKAPSSNGLPSSTGFEMFKDAFYHRFENQ
WRGAPEEISQRLKVYLPDVEAAWARAENKPIFDIGCGRGEWLGLLRQHGMEGIGFDTNAVQIKEGQAAGL
DLRLGDALEALAQAEDNSLSVISAHHLIEHLPFDSVAWLTREAGRVLAPGGLLLFETPNTRNVLVGATTF
YTDPTHLKPMPEQVMGVLLETAGFEPVDIRHINPHERLGEFLDRPGFDNELAQLMFGPQDLAILGIKSKD
K
>gi|99077980|ref|YP_611239.1| peptidase S8 and S53, subtilisin, kexin, sedolisin [Ruegeria sp. TM1040]
MAVPNDPLFSTQWHLQNTAVGEYDLNVVDVWDDYTGAGVTIAVIDDGVEATHPDLIANYSTLKDYDLLNS
SDTIILTPESFPGAGDGSFHGTAVAGIIASVGNNNTGVVGVSYGSTLFGIKLGQELAAPIKLVSGQIMIG
GIDRSADIVSMSLGTLSADNFFGSQDSSIETALAMAFGARTGRDGKGTIFVKSAGNERDADNTGTPVTTE
TNVAAWNATMHSIAVAAVQRTGVIDDYSTPGSSVLISAFGSPGEIVTTDVTGTGYTAGSDYTSGFNGTSA
SAPQVSGVIALMLEANSNLGWRDVQTILAYSARHVGTEIGTSVSGSEKYAYAFNGADNWNGGGLHFSRDY
GFGLVDAKSAVRIAETWGTDFAGTGNQEVASIDLLDTQMTLTGDGTVDRLSGAASTIVEIEHVQLKVDFA
QLFDLQDLELRITGPDGTQSIVLDNVSADNDENDTNTLEQWDYFFSNAFRGMSSEGTWAVELIDLDSSGT
SPVQVQNVELNFYGSVASDNDTYIFTDEFSDYAGRSSHNTAFDDAAGLDTINAAAVSAASTLNLSEGTGN
IDGVSITFSGIESVYTGDGNDNLTGDAGNNVFQAGRGNDTINGGDGIDQAVVLANQFNYSVAINKNGAVT
VTDRNASEGEDGLTDIEMIKFADATLDLTQFVSTASLTVDQFEPLAEMYAAYFNRAPDATGLYFWADKLA
EGLSLNQIAELFFDQAETRALYTDPSNTDAFVTSVYDNVLGRTPDASGFEFWKSQVSNGSVSQGAFVLEV
IGGAKNGGSAEDVRYLSQKTDLGIYFSAIKGMSDVTDSASVFQTFGDASTSNLSGARAAVDQHYADATTA
NGGDFLFSLIGVIDDPFSATFV
>gi|99077981|ref|YP_611240.1| ABC transporter related [Ruegeria sp. TM1040]
MIARSWDRWRSSYIGRLVSESMRSQGWRYGVAALAMIIVAASSAGTAWMMEKIVDAMTTPELRSKVYLVA
GAVIGLFFTKALASYVQALFLARAGNRIVASQQEKLYRQLLRRGVGFFGTTDSSDLLMRVTHGAQAAREL
IDVLMTGFVRDTLTLIGLTIVMVYQQPVLSMLFILIGPIALLGVRHLLKSVRNIMRAEMASLAEIIRVLQ
ETSGGIKIIKVFALEDRMVERMDTAIGQVEKRANDIAKLQSIASPLMELLAGVAIASILVVSTMGIANSE
PPTAGQLMSFITALLMAYEPAKRLSRMRVGIETCMVTVSMMFELLDQDEAIQERAGAVNLEPGNGSIHFN
NVTFGYHSDFPIIKDMNLSFEPGKTTALVGQSGGGKSTIFGLIMRFYDPDAGAVEIDGHNVKDVSFASLR
RKISYVGQDTFLFSTTIMENLRCSAPEASDEEVISAARAAHAHDFICEFPDGYETQVGENGVFLSGGQKQ
RIAIARAILRKSEILLLDEATSALDAESEALVKTSLKTLTKDVTTIIIAHRLSTVLEADTIMVIKDGRVI
EKGDMDELMKKNGSFRQLFEQQFKK
>gi|99077982|ref|YP_611241.1| hypothetical protein TM1040_3849 [Ruegeria sp. TM1040]
MAPASRFLNSHSNPPRLSAGWVLILPGLHTLISACRRLRCSGRGLCGRLSSSRPSLTLSTCALLSGSVRA
GQSWHAVPAGRGIHRASFNFEYVFWKFEF
>gi|99077983|ref|YP_611242.1| hypothetical protein TM1040_3850 [Ruegeria sp. TM1040]
MPTCLVCVDMFPWPTLLRSFLHNKGLYLGIPVSALSQARGTCVFCCPKFVLVCTVVDRETYLVADVVPRL
MLHSYALAGHDPAAVEPASISRSSRHRLTRPSTV
>gi|99077984|ref|YP_611243.1| hypothetical protein TM1040_3851 [Ruegeria sp. TM1040]
MDNYSRFIAYLKVLLPTAALGLFSTVFFLWSPKFNEDNAIPYTHDEIIRRINHRQATTPLYLSTTAKGHN
VRINADHTYLGEELSLPIAEEVTGQLDFIDGSIVTLSADRAVFEEHSDLVNFSGNVVLNSTEGITLESDQ
LTTNIVALTAYSDVPVRASSALGELRSGNMRITTIHNSGHLKMFFGNGVKLTYVP
>gi|99077985|ref|YP_611244.1| hypothetical protein TM1040_3852 [Ruegeria sp. TM1040]
MIWTAILTFVVVISVVIDKRLAFAGGDIRELENKLQVALENPIYGSRFNEFSISVAECEINYSRRDSHSC
EHDSKLIGYDIFVDLSVYEINNNITEAEGVGSEFVGVLTLTPRPPHLELVQNISRVRDEIFALYRGQYGR
GSISASLATQDFISKYPVNTLPAWKRVENCKEESWVHVEDIRLRVKYRSLSELRDLVEAINKICSIHN
>gi|99077986|ref|YP_611245.1| hypothetical protein TM1040_3853 [Ruegeria sp. TM1040]
MATLNIDGKEYDTEQLSEAAREQLASIQLVDQKLAQLQQEAAILQTARNAYAQALQAELPKES
>gi|99077987|ref|YP_611246.1| KpsF/GutQ family protein [Ruegeria sp. TM1040]
MTPRELTCDETLAEMARVLTVEAAALTQMASEVGDPQLKAVEILEAMEGRVIVSGVGKSGHIGNKIAATL
ASTGTPAQFVHATEASHGDLGMVTPRDVCLVISNSGETSELADIVTYSRRFAIPLIAITRKADSTLATQA
DVVLLLPDAPEACGIGMAPTTSTTATLAMGDALAVALMKRRGFEREDFKVFHPGGKLGAQLMLVDGLMHT
GEALPLVAPETPMTEALLIMTAKGFGLAGLVEGGRLTGIITDGDLRRNMDGLMARSAGEVATRGPKVIRR
GSLASEALHDMNSRKISALFVLDNEDRVAGLLHIHDCLRAGLA
>gi|99077988|ref|YP_611247.1| hypothetical protein TM1040_3855 [Ruegeria sp. TM1040]
MKYMLLIYAAPDREPAYGTPEFDEMMAGFAATSEKMNADGVMVDGEGLQGIETATSLRITSGKVETMDGP
FAETREHLGGYYVIDVPDLDTALRYAAMIPVAHFGTIEVRPLMDYNPAG
>gi|99077989|ref|YP_611248.1| RNA polymerase ECF-subfamily sigma factor [Ruegeria sp. TM1040]
MTHAVPSAIAVQQVIDDVMRRDRGRLLAGLSVRLGDIQLAEDALQEAVIAALKHWGRSGVPHAPLAWLMR
AGFNKGIDQLRSRQREGRKAEDLGLIAPDQDAAEQAETIPDARLRLIFTCCHPALEEKSRVALTLRTVCS
LSTRDIAAAFLDSEQTMGQRLSRAKAKIRAKGIGFQVPEPDQWSERLGTVLSTLYLIFTTGYVQEEAGPR
DFCREGIYLARLLCALRPDDPEIEGALALMLLTEARSAARIGPDGAMRPIEDQDSSLWHHETITEAQALL
AQAVLRRQPGAFQIKAALADCHMMRPKPDWAQMALLYQALWRFEPTPVVALNQAVVMAELGQGAQALNHL
RALEDDLGQFQPWHAAMAHVLAQEGHIGDARCAYEQAIKTAPHDAARRFLETRVQRLPPCAFSGS
>gi|99077990|ref|YP_611249.1| hypothetical protein TM1040_3857 [Ruegeria sp. TM1040]
MPLRSFFALITCIGTLCSAPVWAETIRLVQDEAYAPYMTKDGKQPTGIWAEVITQALSRIEGDYDVVLEA
VPWSRAVNLVESGQAHGLVGTYYKPDSRPWIGTYSTAPFTENVAVYCRDGVAEAGWSYPQDFKGLTFGNN
AGFGTPGQAFFDLVASGLISLQEAPTTDLNLKKLAAGRIDCYVQEQLTAEIAITALGISGITQVLDTSVE
NSMIGFRASWQGAEAEGFIAEMDRALAEMMADGTIDQIIATAVAG
>gi|99077991|ref|YP_611250.1| glycosyl transferase, group 1 [Ruegeria sp. TM1040]
MKILFVHQNMPGQYRELVRWLAAQGGHELVFLSQRGGVKIPGVHTLVYTPFHVPAKDAFGLSKDWEAAAG
AGFGAVQTMQKFERKHGFRPDIILGHTGWGELSFFKDLWPDVPILGFFEYYYSMQGGMVGFDPEQPPGPH
APYFNRARNVVPCLNRDVVDLGHVPTLWQRDRFPASFHDKMYVCHDGIRADRLHANPEAQLSLGRLEQPI
SRGDEIVTYVARNMERARGFHIMMRALPAIQAARPNARILMIGGNEASYGRESEHPGGLRGEMEAEVGQY
VDWSRVHFLGRVPYGDLCQIIQLSRCHIYLTMPFVLSWSLLEAMAMEATIVAADVEPVREVITHGDTGLL
VDFFDPEALAAQVAEVLARPQDFASLGARARARVMQDYDFLTRCLPEHLSQINRLVPSARPIPLPEG
>gi|99077992|ref|YP_611251.1| glucose-1-phosphate thymidylyltransferase [Ruegeria sp. TM1040]
MTQRKGIILAGGSGTRLYPITMAVSKQLLPLYDKPMIYYPISVLMLAGIREICVITTPQDADQFQRLLGD
GSQWGVRLTYVEQPSPDGLAQAFILAEEFLAGAPSALVLGDNVFFGHGLPELLAAADAKEAGGTVFGYHV
ADPERYGVVAFDGDGRAHQIIEKPEVPPSNYAVTGLYFLDGSAPARAREVQPSARGELEITDLLQMYLNE
GSLSVETMGRGYAWLDTGTHGSLLDAGNFVRTLHERQGLQTGCLEEIAYHADWISRDALAERAELFKKNS
YGQYLKRLLG
>gi|99077993|ref|YP_611252.1| dTDP-4-dehydrorhamnose reductase [Ruegeria sp. TM1040]
MGSGLRRRYLGKDEEGADMSILVFGATGQVARELARHEGVISVGREQADLSDPGACAALIRETAPEAVIN
AAAYTAVDKAETEEELATVINGAAPGAMAAACVQMGIPFVHISTDYVFAGTGEAPWQTDDPVAPPNAYGR
SKRAGEEAVIAAGGTYAILRTSWVVSAHGNNFVKTMLRLGAARAQVSVVADQIGAPTPARDIAEACLKMA
RQLVLEPKKSGIYHFQGAPYVSWAGFAAEIFAISNLACEVVEIPTTDYPTPAVRPLNSRLDCTTLETVFG
IPQPDWRRGLQDILKELAE
>gi|99077994|ref|YP_611253.1| dTDP-glucose 4,6-dehydratase [Ruegeria sp. TM1040]
MKILVTGGAGFIGSAVVRQAIAAGHEVVNLDALTYAACLDNVASVAESPSYVFEEADIRDRAALDRIFAE
HAPDAVMHLAAESHVDRSIDGPGDFIETNVTGTFNMLEAARKFWIAVGKPARFRFHHISTDEVYGSLPTD
KSVMFTEETAYDPRSPYSASKASSDHLVRAWHETYGLPVVLTNCSNNYGPFHFPEKLIPVVILNALAGKA
LPIYGDGSNIRDWLYVEDHADALLLVLQKGENGRSYNVGGENERTNLELVETLCAILDDKRPREDGTSYK
EQITFVTDRPGHDARYAIDPSRIRTELGWRPSVTVEEGLAKTVQWYLDNEDWWRALQSRKGVGERLGVQT
>gi|99077995|ref|YP_611254.1| acyltransferase 3 [Ruegeria sp. TM1040]
MPALTAPQAHRAYLERTRFGALDGLRALAIGGVLIHHSALAQEAGAWSRGFLGVDLFFVISGFLITTLLL
RERDREGAIALGAFYWRRALRILPLYYLVVTVAGIYFVIVSGHWEALKIWPAYYLFFANFLTEHIPTLYP
TWSLSIEEQFYLLWPLVLIWLPPRLWGAVVLLGVVLNVVAVSGVLRTFGVVPFELGPLWVHLPDATYAPL
LLGAGLALMLHDPRGFALVWRLLGGAGMPFVGLGVLLALVFLLLPQVLAGWPYLLVHLAMTGWLATLVLR
EDSWLHGMLRLRPLVRIGMVSYGIYLLHLMVLHMVRLAGEPLGFAQDSAIFLLAYWGGTFLLAEVSFRYY
ERYFLRLRHKPLGRMGAVRAGQSD
>gi|99077996|ref|YP_611255.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Ruegeria sp. TM1040]
MKVEDTKLSGVKILTPARFGDARGFFSESWNRKRMAEHGLDLEFVQDNHSMSADVGTIRGLHFQAPPHAQ
DKLVRCGQGVLFDVVVDIRNGSPTYGEWIGVELSAENGRQLLVPKGFLHGFITRAPMTEIIYKCTDYYAP
ECDGGVRWDSCGIDWGFDGQPILSEKDAAAPKFADLQSPFVF
>gi|99077997|ref|YP_611256.1| 2-keto-3-deoxygluconate kinase [Ruegeria sp. TM1040]
MTRIVVIGECMVEMAPVDGGLYRMGFAGDTFNMAWHLRYLLGSDHCVDYLSAVGDDSTSNAMLDFIQSQG
VGIAHIRQIAGMTTGLYLIRQENGDRAFSYWRETSAARQLADDPAALARALQEADLVCLSGITLAILSPK
AREVLWAAITESGAQVAFDPNIRPTLWSSQEDCRAALTYAAVRSDVILPSFDDDAALFGDVAPQATVARY
TRLGVGEVVVKDAARPAIYSGSDGTLEIAADRLAVPVVDATGAGDSFNAAWLAARLQGAAPKEALIAAHK
HAACVLQVSGALLVS
>gi|99077998|ref|YP_611257.1| glucuronate isomerase [Ruegeria sp. TM1040]
MTGFLHQDFLLDTATARRLFHEVARYLPIVDYHNHLPPAEIASDRTWENLGEMWLAHDHYKWRVMRWAGI
DEARVTGDATWREKFDAFAEAMPRAVLNPVHHWSHLELWRYFDLNGTVLSPISADNVWDAANAQLGEKGY
SAQSLLRKMKVELVGTTDDPLDTLEHHAAMAGSDIRVVPTFRPDKSVQIEAPGFAAYMDSLEALTHPIHS
FDDLVAALSLRLDYFVEQGCRAADHGISHLDAANIPGAFDLDAALKAARQGKPITPEQVAGHRAALFDAL
GRAYAVRGLVMQCHMNVVRNGSSRLLLGVGPDAGGDSMRDTDMAGPLNILLDRLDRDGKLPRMVLYGLDP
SRNPILAATAGTFQDGSVPGKIQAGAAWWFNDTLDGMEAQMRTLAQVGLLSTFLGMLTDSRSFLSFPRHE
YFRRLLCGMIGRWAETGHLPDDADLLDRLVRDICYNNAKAWFLEQ
>gi|99077999|ref|YP_611258.1| fructuronate reductase [Ruegeria sp. TM1040]
MTNSLIPCSYEQTLLKPRILHIGFGAFARAHPMVYLHHGLVAEGGDWGVVAARLNSGVDALDSLDAVQGR
YHIAEADGDTITLREIGLLCGTCHPARDGVDAIPALIASPDMSVILLTITEKGYCTKDGQLDLTQAAIQA
ELDGGLPTTAIGVLVSGLERRRAADLGGITILSCDNQPDNGALTRAAVLGFAEELDLNLAEWIRTHVRFP
SSMVDRIVPAMTDDSHTAVASALGRDDPNAVLCEPFRQWVIEDDFANERPPFAEGGAMLVADVQPFEEMK
LRLLNGAHTTLAWLGQLLGYQTVADCMADKELRALIRHLMLAEQAATLRPLEGIDLAAYADELLKRFENT
RLRHRLDQIASDSSQKMPQRLFAPIAINLEAKREWSVSALAVAAWIKGLGSLPPVPDPRQDELRRAALCN
DPVAAVLSLPSLVPDALRPLAEFQAAISVAFERLQGGAKATVTTTAKELRR
>gi|99078000|ref|YP_611259.1| Alpha-glucosidase [Ruegeria sp. TM1040]
MKCLKIWALEAETTTGVILRVEGRHLLHISVLEENRFRVSLQKDAEWRLERTWTVAPAGDAPWEGRRRED
ISGFSCPPPQLSQNETELVLSTETMRLRILAPLQMVWEAKVNGAWKAFAEDRPTGGIHLGLRDHAHAHFL
SRHPQEPVFGLGEKTGPLNRVGQRYEMRNLDAMGYDAERTDPLYKHVPFTLTRTQTAGCWSIFYDNLASC
WFDFGNELDNYHAPYRAYRAEDGDLDFYMTWAPELLDLVKQQERLTGGTAFPPRWSLGYSGSTMSYTDAP
DAQAQLEGFLTKIAEYRIPCDSFQMSSGYTSIGPKRYVFNWNDEKVPDPAAMAAKFADKGVHLIANIKPC
LLQDHPRYAEVANAGLFVQASAEADTNCGPERSVFWDDEGSHLDFTNQATVDWWKQNIGEALLQRGIGST
WNDNNEYEIWDRHAQCAGFGKAIDMSLMRPVMPILMTRASMEAQEAHAPEKRPYLISRSGAPGLQRYAQT
WSGDNRTDWKTLRWNQRMGLGMSMSGFYNIGHDIGGFSGPRPEPELFVRWVQNGVFHPRFTIHSWNDDAT
VNEPWMYPEVTDHIRAAIELRYQLLPYLYTCLWQAAERSEPMLRPLFLDFGADPQAWEESDSFLLGRDLL
VATVLDKGVDAISVYLPRHSGGWWDFHTGLWHEGGQWLTVPVALDTIPLFIRGGAVVPMGQGADRAAPEM
EIARLLAVFPAQGVQETTSLLYEDDGVTKTGKWCLSHLVLNSTNDHISLISKREGNGAPVLPEALVVLPA
GERRILKTGTRIDL
>gi|99078001|ref|YP_611260.1| TRAP dicarboxylate transporter- DctM subunit [Ruegeria sp. TM1040]
MTTAIFLLFGSFVVLMALGVPIAFAIGLATTATFLLFMGVDQSLFIVAQQMASGLDSFTLLAIPFFILAG
NIMNRGGIAMRLINFAKVLGGRLPGALAHCNVIANMMFGSISGSAVASAAAVGGVMAPLQKKEGYDPAFS
AAVNIASCPTGLLIPPSATLIVYSLITGGTSIAALFVAGYLPGILMGLGLMIVAGVIAKRRGYPVAPRPA
LSEVMVAARDAALPLGLIVIVMGGIISGVFTATEASAAAVLYTLVLALVWYREITIKDLPAILIESAVTT
SVVLLMIGASIAMSRVMAFGGIPFAISDFLLGLSDNPIAILLAINVALLVVGTFMDMTPALLIFTPIFMP
VVKGLGMDPVHFGIVMTLNLCIGICTPPVGSALFVGCSVGGTSIAKVIRPLLPFYAVLFGLLMLVTYVPD
ISLFLPRLLLGYQ
>gi|99078002|ref|YP_611261.1| tripartite ATP-independent periplasmic transporter DctQ [Ruegeria sp. TM1040]
MRAWVDMLLKLVITTIFVVLVACVSWQVISRYVLGTPSTVTDELARFLFMWLALVGGAYTLGLRRHLAID
LLTQKLSGRARIISEIFVLFAIFGFATSVMIRGGSQLVLKTMASGQVTPALQFPMGLVYGAIPFAGAIIV
FYCVIFAFELWRDGPSSPELGETAPLGGPLD
>gi|99078003|ref|YP_611262.1| TRAP dicarboxylate transporter, DctP subunit [Ruegeria sp. TM1040]
MTKTFTTALSALALTASVGATGATTLKLNHNNPPDHPVHISMQIMADRVAELTDGEIKIQIFPNAQLGTQ
RESMELVQNCALEMARSNASELEAFEESYSALNLPYIFSSEEHFNTVITGDIGQDILNSSVDQGFRGVAF
YTEGARSFYAQKPIMSPADLQGVKVRVQPSPSAIRMVELLGGNPTPISWGELYSALQQGVVDAAENNPTA
LTTARHGEVVSDFSLDEHTMIPSVVVISNCAWDGMTAEQQKALQTAALDSMAAHRKAWNAASDAAIEEAK
TTLNVNVHMVDKAPFAEAVLPMHEEVAAKSEHLADLIDRIKAAQ
>gi|99078004|ref|YP_611263.1| Beta-glucuronidase [Ruegeria sp. TM1040]
MLERSELADNALQALHDEDYDRPFNTQNLNADTLIFTRGRQGQSLDGDWNFCVDLLDTGLRQKWFAMTPE
TPADRVEPWDYDPYMGDTVPVPSCWQMQKEKWYFFEGSAWYTRPLTHTPTPERRQVLRIGAAQYDCKVFL
NGAFLGNHYGGSTPFCVELTEALKPGQNWLMLCVNNTRTLDRVPMRNTDWFNYGGVYREVTLYDLPSVVI
RDLFVRLEGNAIRVSAEVDGECASAQLLIPELGIDVELPLIAGKGDLTLPASPELWSPDNPKLYDVSLTA
GEDQVRDRVGFRSISREGTEILLNGTPLFLRGISVHEDDATQGKVTSETDIRRRFAHAKELGCNFLRLAH
YPHHERASEIADEMGLMLWEEVPVYWAIDFANPATRRDAENQLRELIRRDRNRASVIIWSVGNENPDTDA
RLDFMRGLADLAKTEDPTRLTSAACLVNHTKLKIEDRLAEYIDIIGLNEYYGWYEENFDELNEIGRNSAP
DRPVVISETGADGDSTEQGPERGLFSLAYQDEVYAKQIATLRTLDYVKGMSPWILYDFRVERRQGIFQRG
WNRKGLIAGDKATKKPAFHRLAAYYAERAAVEHQPPFAPEETA
>gi|99078005|ref|YP_611264.1| GntR family transcriptional regulator [Ruegeria sp. TM1040]
MTQYRRYQDVAQALRGVIREEGFAVGDRLPPERQLSERLSVSRSLVREALIMLEIDGLVEVRKGSGIYLA
TPSATKAPPERDDIGPFELLQARQLLESSIAAFAAEMVTKNDITRMREALEMERADIEAGSTDHSGDELF
HRLIAEATQNSVLVDMVDELWRKRDQSPMWAKLHDRIFDAGYRQNWLDDHQQILTALRTKDRDGARAAMW
QHLAHVRETLMELSDVDDPAFDGYLFQSISAPT
>gi|99078006|ref|YP_611265.1| mannonate dehydratase [Ruegeria sp. TM1040]
MIETWRWFGPNDPVTLTDIRQAGATGVVTALHSLPNGTVWPVEEIVARRDMITAAGLNWDVVESVPVHED
IKRAAPGWEEKADAWAQSIRNLAACGIKTVCYNFMPLLDWTRTDLTHPLSDGALCLRYDAVDAAVFDIHI
LTRVGADAEHRPEIVQRATERFTKMTETECEALTQTILAGLPGAEESFDINSFRSHLALYNDIDATRLRA
NLAAFLQRVVPVAEEVGVRLGIHPDDPPFPIFGLPRVVSTAEDLDHIIQVYESPSNGLTFCTGSLGVRAD
NNLPAMLTRFGKHVNFLHLRATQREEDGISFHEAPHLLGNVDMVAVCKAALAAEAVGDRELPFRPDHGHM
LAHDQRVSSTPGYPYIGRLRGLAELRGVLHTLAWLQKDD
>gi|99078007|ref|YP_611266.1| hypothetical protein TM1040_3874 [Ruegeria sp. TM1040]
MWYRFAATFPPRRRMWASSPLLPFRLALQTIEHQGGAASVSFYLLLRSSMLRRSILAVSLGVIGSASFAQ
SSEPVTWTGVLESASTSDCVAQSEPDFKRAISCYEVALGGCMDITDHKSCLEDAIDELKRLLPLYNSHEQ
AKEIAMQYDPARCHEFEIVEQDLSKGEFLLQCQFTALVTQVTAGHVALIWGELHFQN
>gi|99078008|ref|YP_611267.1| hypothetical protein TM1040_3875 [Ruegeria sp. TM1040]
MNPVMPTDKARMVKQELKRAKNLQSADRIAGTSPNQRVSSPKIEDTDKPKFGMTVSMAVASSLRFSSSRI
SEMNASWCSSSAPTRIEKALMPSMAFTASRPERLQIGPFWACSRLAPLLRDSRISQFRGRPLLVSPPACL
TGAANFCSPPCQWAGQSDTAAERMSCLGCWRHLAP
