LOCUS NC_007900 7552 bp DNA circular BCT 26-JAN-2007 DEFINITION Chlamydophila felis Fe/C-56 plasmid pCfe1, complete sequence. ACCESSION NC_007900 VERSION NC_007900.1 GI:89898813 DBLINK Project:370 KEYWORDS . SOURCE Chlamydophila felis Fe/C-56 ORGANISM Chlamydophila felis Fe/C-56 Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydophila. REFERENCE 1 (bases 1 to 7552) AUTHORS Azuma,Y., Hirakawa,H., Yamashita,A., Cai,Y., Rahman,M.A., Suzuki,H., Mitaku,S., Toh,H., Goto,S., Murakami,T., Sugi,K., Hayashi,H., Fukushi,H., Hattori,M., Kuhara,S. and Shirai,M. TITLE Genome sequence of the cat pathogen, Chlamydophila felis JOURNAL DNA Res. 13 (1), 15-23 (2006) PUBMED 16766509 REFERENCE 2 (bases 1 to 7552) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (11-MAR-2006) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 7552) AUTHORS Hattori,M., Yamashita,A., Toh,H., Oshima,K. and Shiba,T. TITLE Direct Submission JOURNAL Submitted (19-MAY-2004) Kitasato Institute for Life Sciences, 1-15-1 Kitasato, Sagamihara, Kanagawa 228-8555, Japan COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AP006862. COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..7552 /organism="Chlamydophila felis Fe/C-56" /mol_type="genomic DNA" /strain="Fe/C-56" /db_xref="taxon:264202" /plasmid="pCfe1" gene 57..1073 /locus_tag="pCF01" /db_xref="GeneID:3959318" CDS 57..1073 /locus_tag="pCF01" /codon_start=1 /transl_table=11 /product="integrase" /protein_id="YP_515923.1" /db_xref="GI:89898814" /db_xref="GeneID:3959318" /translation="MVDFATLGGRLLVRKNLDCAVPVHCKILRLSMSGLSHYHKSRLC LTVLEAANVWLATLSPITRKNYASGIKFLVSNNILDGSMKLESLVCFDHCDALNKIKS LTSTCSGKPISEASKQARAACYISFTKFLYRLTKGIIKQASPSRDFGNSTFYKIRDKV KTEFISKQEWLLFFDALKRISFRDYLIGKLIIQGVRKLNEVISLRTEDLSFAQNLVTF KVKKRQNRFQEVKVNYPSFLMQELRDYLGNREGWVFVSGEGQQVAINQVYYYFKLAES DINSPIKVTPHVLRASALAYLKKMGFADQEIMRVSCLSSTQMLSAYDTGNIDNITSQL PLIF" gene complement(1157..2164) /locus_tag="pCF02" /db_xref="GeneID:3959319" CDS complement(1157..2164) /locus_tag="pCF02" /codon_start=1 /transl_table=11 /product="integrase" /protein_id="YP_515924.1" /db_xref="GI:89898815" /db_xref="GeneID:3959319" /translation="MRKDNSLHTSLDKMFESKVYRSNLTHQEFLSIKNECIWKGLRDI QLSEAIFIWISSLNSHTARSYKGSVLALERIGLISLKMSLQEFALVNHNIILDSIKQV PEEIVHWSEGTKQVRAACYISLTKFLNRATSGMIPIAQPSHQESNKTFYKLRDLVKTN AMSRIERVAFLEALKNINYRDWLIAQTILQGAKRVTEVLSVTTDKISFDNGTISFDQS KNRGVSKITIITYPQQFMKLIQVYLGNRSGLVFVTKKGKGVSLKQLAGTFAKAGIKAN IPFKVTPHVLRATAVTEYKKMGCSDSEIMKVTGHSSSKMIYAYDKSIASENASKKVSL I" gene 2241..3644 /gene="dnaB" /locus_tag="pCF03" /db_xref="GeneID:3959317" CDS 2241..3644 /gene="dnaB" /locus_tag="pCF03" /note="pCF03" /codon_start=1 /transl_table=11 /product="replicative DNA helicase" /protein_id="YP_515925.1" /db_xref="GI:89898816" /db_xref="GeneID:3959317" /translation="MLKAIFGCPMMKQSEEEKELLDVEFFVLGQAVNYLEHAHTVVRR LSEHHFKLESHKNIFLLIRDILHTRETISISLIWEEIKRRNLDKFMDVSYLIHMSQNA DIPIDLDHHIDFLHEKHVNNLLKEFLDLSFQDFTRYPNRRSPYTLVDQFKERLDTIHK KTSYPRRKNIGKTVYDIFSSGDDGKNGVISQIRHRYDYRSKHQTDYVDGLPTGYPSID EHSIILSKGNFVVVAARPAMGKTAFAIDIALNLVLEQEKGVGFISLEMSPNQIVERIV SNLSNISCEQLKRGNFPKDVLSKIENLGTKLKKTNFFICDNKSSDLNYLIDQARELKE SQSIDALFIDYLQLIGGNKKAENRQNEIAEISRQLRKLAGELQIPVVCLSQLSRKVED RGDKRPMLSDLRDSGQIEQDADVILFLHRKDYYSQEATKGLSEIIIGKNRHGSVFSTN LMFNSSTGKFSVQKEAW" gene 3617..4681 /locus_tag="pCF04" /db_xref="GeneID:3959320" CDS 3617..4681 /locus_tag="pCF04" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_515926.1" /db_xref="GI:89898817" /db_xref="GeneID:3959320" /translation="MFGSERSMVKSENQIIKSSLHLENQKFGRKPQLTEDQLELFSSV CTESKIEVIGLDLQPSHYHALAAIQKLLTATNYRGNLEGSYLSRETNTFKFEGTIPRI KFTKSEYLEAYGVKKYKTSRNKNEFGGKEALIALEALYHLGNEPYLIVATRKRWNKGE EVVDRYQTFSPILRICEGWEGLTPKENKALDEEPFLNLISKKHKGFIIEPCPIIVDQI DSYFVLKPANMYQEIKLRFPNASKFTYTFIDWIVSTATRKKMNSSGVKEWPDKIEIGF ENLSYTLRMNRYITSRNWKKIELAISRCIEIAIELKWLTKHERIQGKTISKKEVFYLN KNKFQQISTNKTIQNTTNNN" gene 4706..5530 /locus_tag="pCF05" /db_xref="GeneID:3959321" CDS 4706..5530 /locus_tag="pCF05" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_515927.1" /db_xref="GI:89898818" /db_xref="GeneID:3959321" /translation="MRTQIKRVLIMGNSGFCLCNTQNCVFADNIKIGQMTSPLQNQQL LIGTDSTPVAAKITAKEGLKVEIQTKTGQDASIDLSIDPKALSDLILGQIQEGLIDAI IKNITSSLVQDVIDMIVSDPTLHLKNAFKNFPISEKIQCNGLFTKSNIGTLVGGTEIG KFTITPENTNSTFLISADIIASRMEGNVVLALVKEGDTAPCAISYGYSSGIPNVCSLR TSVSNSGATPVTFSLRVGGMESGVVWVNALANGDSILGTTTVSNISFLEVKQQTNG" gene 5485..5934 /locus_tag="pCF06" /db_xref="GeneID:3959322" CDS 5485..5934 /locus_tag="pCF06" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_515928.1" /db_xref="GI:89898819" /db_xref="GeneID:3959322" /translation="MEYIVLRSQTTNKRIIKLNSTKLNDFFVGYFLSVLYEKNMHLFT GEIMNNRQSMTNDFIKIVKDVEKDFPELDIKMKIHKEKITFLNSPSELYHKSISVILN LLNQIQTSLGLFPDSPIIEQMELNNLKLKKALIMLILSRKDMFSKTE" gene 5935..6744 /locus_tag="pCF07" /db_xref="GeneID:3959323" CDS 5935..6744 /locus_tag="pCF07" /codon_start=1 /transl_table=11 /product="ParA family protein" /protein_id="YP_515929.1" /db_xref="GI:89898820" /db_xref="GeneID:3959323" /translation="MNIYSNVGVNVETLAFCSFKGGTGKTTLSFNVGSNLAQISKKRV LLVDLDPQANLTTSLGVQIHEEYSLNEVLRNSNEIARAIHKTKIENLDIIPSSVLVED FRGLNKDASLSVNHLHLALQEIQNQYDICILDTPPSLGILTQEAFLASQYLVVCLTPE PFSILGLQKIKEFCSTIANDLDVLGIVFSFWDERNSTNSTYIGIIETIYEGKILSSKV RRDITVSRSLLKEAPVINVYPNSRAAQDILNLTKEIENKLFFNNKLVQETL" gene 6741..7481 /locus_tag="pCF08" /db_xref="GeneID:3959324" CDS 6741..7481 /locus_tag="pCF08" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_515930.1" /db_xref="GI:89898821" /db_xref="GeneID:3959324" /translation="MSKLIKEASAFFQKNKENTAKEFHKKEFAMDVFSVSLSEDEKEQ IENLIVSRYDHLDSKFSNGLASIKLLTGQIKSIQKQHVLLIGEKIYRVREILRSMNSP ETTFSAWVNLVFHTKSSAYNALGYYELFISLPDKNTKSLFQSIPYKTAYLLASRKGSV KEKVRILGKIEGMSNSSAIDILNKFLPSLRSSQAGKLVGFEEKNKELSEKLIEILKIV CSDLELSEHNRNLLQQLFEKTLHTNSGC" ORIGIN 1 ttgcaacttt aggtggtaga ctttgcaact ttaggtggta gactttgcaa ctttaggtgg 61 tagactttgc aactttaggt ggtagacttt tggttagaaa aaacttagac tgcgcagtac 121 ctgtacattg caaaatattg agactgagta tgagtggttt gagtcactac cataagagta 181 gattatgtct gacagtacta gaagctgcta atgtatggtt ggcaacttta tctccaatca 241 ccagaaagaa ttatgcttcg gggatcaaat tcctggtttc taataatata ctagatggtt 301 ctatgaagct ggaaagttta gtttgttttg atcattgtga tgctttgaac aagataaaat 361 ccttaacaag tacttgttca ggaaagccta tttctgaggc ttcaaaacaa gctagggctg 421 cctgttatat atcttttacc aagtttcttt ataggttaac taaaggtatt ataaaacaag 481 ctagtccttc tagagatttt ggaaattcca cattttataa gatcagagat aaggtgaaaa 541 cagagttcat atctaagcaa gagtggctgt tgttttttga tgccctgaaa agaattagct 601 ttagagatta cctaataggg aaactaataa ttcaaggagt tagaaaatta aatgaggtaa 661 tttctcttag aacggaagat ttatcttttg cacagaatct ggtcactttc aaggtaaaaa 721 agagacaaaa taggtttcag gaggttaaag taaactatcc tagtttctta atgcaagaat 781 tgcgtgacta tcttggaaat agagaaggct gggtttttgt ttctggagaa ggacaacagg 841 tggccattaa tcaagtttat tactatttta agctggcaga aagtgatatt aattctccaa 901 ttaaagttac acctcatgtt cttagagcca gcgctctggc ttatctgaaa aaaatgggat 961 ttgcagatca agaaataatg agagtttctt gtttgtcttc aactcaaatg ttatctgctt 1021 atgatacagg taatatagat aacattactt ctcagttgcc tttgatattt taatataatt 1081 ttaattatac aggactaaag aaacctctgt ggtttagttt tatttttagt ggaaatggat 1141 catttccact ttaagattag ataagagata cttttttcga agcattttcg gatgctatgg 1201 atttgtcata ggcatatatc atcttcgaag aagaatgacc ggtgactttc ataatttcag 1261 aatctgaaca acccattttt ttatattctg ttacagccgt agctctgaga acatgaggtg 1321 taactttaaa tggtatattt gcttttattc ccgctttagc aaaagtgcct gctagttgtt 1381 tcagggaaac cccttttcct ttcttggtta caaaaactaa gcctgatcta tttccaagat 1441 agacttgaat caatttcata aattgttggg gataggttat aattgttatt ttggatacac 1501 ctcgattttt gctttgatcg aaagatatgg ttccgttgtc aaatgaaatt ttatctgtag 1561 taacagataa aacttctgtt actcgtttgg ccccttggag aatcgtttga gctattagcc 1621 agtctctgta attgatattc tttaatgcct ccaaaaaagc tactctttct atccgactca 1681 tagcatttgt ttttactaag tctctgagtt tatagaatgt tttattggat tcttgatgag 1741 agggttgggc tataggaatc attcctgagg ttgcacgatt taagaatttg gttagagata 1801 tataacaagc tgcacgcacc tgctttgttc cctccgacca atgaactatt tcttctggga 1861 cttgttttat tgagtctaaa ataatgttgt ggttgactag agcaaattcc tgtagtgaca 1921 ttttcagaga aatcaaacca attctttcta gtgcaagtac agaacctttg taagacctag 1981 ctgtatgact atttaatgaa gatatccata tgaaaatggc ttctgaaagt tgaatatctc 2041 ttaatccttt ccaaatacat tcatttttaa tagaaagaaa ttcctggtgt gtcaggttgc 2101 ttcggtaaac tttactttca aacatcttat ctaagcttgt atgcagtgaa ttgtctttac 2161 gcacgtgcaa cctcgtgata taagttgtga attttacctg attatttcca taatcaagca 2221 aattatattc cctaaacaaa atcctcaaag ctatttttgg atgtcctatg atgaaacaat 2281 ctgaagaaga aaaagagctc ttagacgttg aattttttgt cctaggacag gctgttaatt 2341 atctagaaca tgctcacact gttgtgcgtc gattgtctga gcatcatttc aaattagaga 2401 gtcataaaaa tatatttctt ctgatacggg atatattaca cactagggag acaatttcca 2461 tatctttaat ttgggaagag ataaaaagaa gaaatctcga taaatttatg gatgtttctt 2521 acctgataca tatgtctcaa aatgcagaca tacctataga tttagaccac catattgatt 2581 tcttacatga aaaacatgtt aataatcttc tgaaagaatt tctagatttg tcttttcagg 2641 attttacaag gtatcctaat aggcgttctc cctatactct tgtggatcaa tttaaagaac 2701 gcttggacac tattcacaaa aaaacatcgt acccaagaag aaaaaacata ggaaagactg 2761 tttatgacat tttttcttcc ggagacgacg gtaaaaacgg tgtcatctca cagatacgcc 2821 atcgctatga ttacaggtca aaacatcaaa ctgattatgt tgacggatta cctacgggat 2881 acccgtctat agacgaacac agcattatat tatcaaaggg taacttcgtt gttgttgctg 2941 caaggcctgc aatggggaag acagcctttg ctatagacat cgcacttaat cttgtcttag 3001 aacaagaaaa aggtgttggt ttcatttcat tagaaatgag tccgaatcaa attgtggaac 3061 gcattgtatc aaatttaagt aatatttcct gtgaacagtt aaaacgaggg aattttccta 3121 aagacgtatt atctaagata gaaaatcttg gaaccaaatt aaaaaagaca aactttttta 3181 tatgtgataa taaaagttcg gatttaaatt acttgataga tcaggcaaga gaattaaaag 3241 aaagtcaaag tatcgacgcc ttgtttatag actatttaca attaatcggt ggcaacaaaa 3301 aagctgaaaa tcgacaaaat gaaatagctg aaatttcgag acaattaaga aagttagcgg 3361 gtgaattaca aattcctgtt gtatgtctat ctcaactgtc tagaaaggta gaagatcgag 3421 gcgataaaag accaatgcta tcggatctca gggatagtgg tcaaatagaa caggatgcgg 3481 atgtaatctt attcttgcat aggaaagatt attattcaca agaggctacg aaagggcttt 3541 cggaaatcat aattggaaaa aatagacatg gttcggtgtt ttcaacgaat ttaatgttta 3601 attcttctac agggaaattt tcggttcaga aagaagcatg gtgaaatcag aaaatcaaat 3661 tattaaaagt tctctgcatc tagagaatca aaaatttggg agaaaacccc aactaacaga 3721 agatcaatta gaattatttt ctagtgtttg cactgagtcc aaaatagaag taattgggtt 3781 agatttgcaa ccatctcatt atcatgctct tgctgctatt caaaaactat taacggctac 3841 aaattatcga ggaaatttag agggttcata cttatctaga gaaacaaata cattcaaatt 3901 tgaaggtact attccaagaa tcaaatttac taagtctgaa tacttagaag catatggtgt 3961 gaagaaatat aagacatcga gaaacaaaaa tgaatttgga ggaaaagaag ctttaatagc 4021 attggaagct ttatatcatt tgggaaacga accgtatctt atagttgcca cgagaaaacg 4081 ttggaataaa ggagaggaag tagtcgaccg ataccaaaca ttttctccta ttttacgtat 4141 atgtgagggg tgggaggggc ttacaccaaa agaaaacaaa gctttggacg aagaaccttt 4201 tcttaatcta atttctaaaa aacacaaagg attcatcata gaaccatgtc ctataatcgt 4261 agatcaaata gactcctatt ttgttttaaa gcctgcaaac atgtaccagg aaataaaatt 4321 aagatttcct aatgcttcca agttcaccta tacatttata gattggattg ttagcacagc 4381 tacaaggaaa aaaatgaata gttcaggcgt aaaagaatgg cctgacaaaa tagaaatagg 4441 atttgaaaac ctgtcttata ccttaagaat gaatcgatat attacttcaa gaaattggaa 4501 aaaaatagaa ttagcaatta gtaggtgtat tgaaatagct atcgaattga aatggttaac 4561 taaacacgaa aggatccaag ggaaaaccat ttctaaaaaa gaagtgtttt atttaaataa 4621 aaacaaattt caacaaattt caacaaacaa aaccattcaa aatacaacaa acaacaatta 4681 attgttgatg ggcaaaaaaa aataaattag aactcaaata aaaagagttt taattatggg 4741 taattctggt ttttgcttgt gtaacacaca aaattgcgta tttgcagata atattaaaat 4801 tggtcaaatg acctctccat tgcaaaatca acagctgtta attggaactg actctacgcc 4861 agtagcggca aaaataactg ctaaagaagg tcttaaagta gaaatccaaa cgaaaacagg 4921 tcaagacgca tctatagatt tatcaataga tccaaaggct ctgtcagatc taatcctagg 4981 acaaatacaa gaaggactga ttgatgctat cataaaaaac atcactagta gtctagtaca 5041 agacgttatt gatatgatag tatcagaccc aactctacac ttaaaaaatg ccttcaaaaa 5101 ctttcctata tcggaaaaaa tccaatgtaa tggtctgttc acaaaatcca atatcgggac 5161 attagttgga ggtactgaga ttgggaaatt cacgattaca ccggaaaata ctaatagcac 5221 attcttaatt tcagcagata tcatagcttc taggatggaa ggaaatgtcg tcttagcatt 5281 ggtgaaagag ggtgacactg ctccttgcgc tattagttat ggttattcat ctggtatccc 5341 aaatgtttgc tctttaagaa cctctgtaag caattctgga gcgactcctg ttacattttc 5401 actaagagtt ggtggtatgg aaagtggtgt agtttgggtt aatgcgttag caaatggaga 5461 ttcaatttta ggaacaacaa ccgtatcgaa tatatcgttc ttagaagtca aacaacaaac 5521 aaacggataa taaaacttaa cagcactaaa ttaaatgact tttttgttgg atattttctt 5581 tcggttttat atgaaaaaaa catgcatcta tttactggag agattatgaa caatagacag 5641 agcatgacta acgattttat taaaattgta aaagatgttg agaaagattt cccagaacta 5701 gatataaaaa tgaaaatcca taaagaaaag attacctttt taaattcgcc gtcagaatta 5761 tatcacaaaa gtatatccgt tatactgaac ctgctcaacc aaatacaaac atccttaggt 5821 ttattccctg attctccgat aatagagcaa atggaactca acaatttaaa gctgaaaaaa 5881 gctttgatta tgttgattct atcaagaaaa gacatgttct caaaaaccga ataaattaac 5941 atctactcta acgttggagt aaatgtggaa acactagcat tttgttcttt taaaggcggt 6001 acagggaaaa caaccctttc atttaatgtc ggtagtaacc ttgcccaaat aagcaagaaa 6061 agggttttgc ttgtggattt agatccacaa gcaaatctaa ctacatccct tggtgttcaa 6121 attcatgaag aatatagtct taacgaggtt ctaagaaatt ctaatgaaat agcccgagct 6181 attcataaaa caaaaataga gaaccttgat atcatcccat cttctgttct ggtggaggac 6241 tttcggggtt taaataaaga cgccagctta tcagttaatc acctacatct agcattgcaa 6301 gagattcaga accaatacga tatatgtatc ttagacactc caccaagttt gggtattctt 6361 actcaggaag cttttttagc tagtcaatat ttggtcgtat gcctcactcc tgagccattt 6421 tctatccttg gtttgcagaa aataaaagag ttttgttcaa cgattgcaaa tgatttagat 6481 gttttaggaa tagtgttttc attctgggac gaaagaaatt caacaaactc aacttacata 6541 ggaatcatag agacaattta cgaaggtaag attttatcta gtaaagtacg aagagatatt 6601 actgttagta gatctctgtt aaaagaggct cctgtaataa atgtttatcc aaattctaga 6661 gccgctcaag atatcttaaa tctaactaaa gagatcgaaa acaaattgtt ttttaacaat 6721 aaactagttc aggaaaccct gtgagtaagt taatcaaaga agcatctgct ttttttcaaa 6781 aaaacaaaga aaatacagcg aaggaatttc ataagaaaga atttgcgatg gatgttttct 6841 ctgtttcttt aagcgaagat gagaaagaac agatagagaa cctaattgtt agtagatatg 6901 accatcttga tagcaaattt agtaatggat tggcttctat taagctattg acaggacaaa 6961 ttaagtctat acagaagcaa catgttctcc taataggcga aaaaatctat agagttagag 7021 agattctaag gagcatgaat tctccggaaa ctacattttc tgcttgggtc aacctagttt 7081 ttcatacaaa gtcttcagct tataatgccc taggatacta cgaattattt attagccttc 7141 cggacaagaa tacgaaatcc ctatttcaat ctatacctta taaaacggct tacttgctag 7201 catccagaaa aggatctgtc aaagaaaaag tccggatttt aggaaaaatt gagggcatgt 7261 cgaactcatc ggctatagat attctgaata aatttcttcc atctttaagg agctcgcaag 7321 caggaaaact tgtaggtttt gaagaaaaga acaaagaatt gtcagaaaaa ctaatagaaa 7381 tcctaaagat tgtttgctcg gacttagagt tatccgagca taatagaaat ctgttacagc 7441 agctttttga gaagacttta cacacaaatt ctggatgctg aaatcaatca gcagcaagta 7501 aaaagtatta tatactttta agaattttaa accctgaaaa ctccgagaga aa //