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The map label for this gene is ftsY [H]

Identifier: 89256930

GI number: 89256930

Start: 1586864

End: 1587859

Strand: Reverse

Name: ftsY [H]

Synonym: FTL_1657

Alternate gene names: 89256930

Gene position: 1587859-1586864 (Counterclockwise)

Preceding gene: 89256931

Following gene: 89256929

Centisome position: 83.75

GC content: 34.74

Gene sequence:

>996_bases
ATGTTTTTCAAGAAAAAAAAGAATACAGAAATTGAATCACCTATAGAAAAAGTACAAGAGAAGGATAATAAAAAAGGATT
ATTTTCTCGACTCCAAGCAGGTTTATCAAAAACAGCAAATAAGTTCGGTAGTGGTTTAAGTACCATACTTATGGGTCAAA
AAGTTGTTGATGAAGAGCTTTTGGAAGACATTGAGATGCAACTACTAACAGCAGATGTTGGTGTTGAAGCGACAGATGAG
ATAGTTACTTATTTGTGTGACAAAGTTGCTAGAAATGAGTTGCAAACAGCTGATAAGCTTAATCAAATAATCCAACAAAA
ACTTACAGAAATAATTTTACCTTGTGAAAAGCCATTAGAAGTAGATACACAAAAGTCGCCTTTTGTAATATTAGTTGTAG
GGGTTAATGGTGTTGGTAAAACGACAACTATAGGTAAACTCACAAAGAAACTACAATCACAGGGAAAATCAGTAATTTTA
GCTGCTGGTGATACTTTTAGGGCTGCCGCAGTCGAGCAGCTTCGTGAGTGGGGTGATAGAAATAATACCCACGTTGTCTA
TCAGCATGAAGGAGCAGATAGTGCTTCGGTTATTTACAATGCTATAGGCTCAGCTAAATCAAAAGGAATTGATGTTGTGA
TTGCTGATACAGCAGGTAGACTACATAACAAAGATAATCTTATGCAAGAGCTTAAAAAAGTTGTTAAAGTTATCAAGAAA
ACTGATGAAACAGCGCCACATGAGATTATGCTCGTTGTTGATGCAACAACCGGAGGCAATGCTTTAAATCAAGCAGAAGC
ATTTAACCAAATCGTTAATTTAACTGGTATAACAATTACTAAGCTTGATGGCACAGCAAAAGGCGGTATTGTATTTTCAA
TTGCTAAAAAACTTGGTTTACCACTTAGATTTATAGGTGTAGGTGAAAAAATTGATGACCTACAAGTTTTTAATGCCAGA
GATTTTACTACTGCATTATTTAATTCTAACGATTAA

Upstream 100 bases:

>100_bases
ATATTGTCAGTATGTTTGATCCATTACATCAAAAAATTGCTAAACTTAGAGATAAATATTTTGAGTGATTATTTACTTAA
CTAAATTTTTAGAGAGAAAG

Downstream 100 bases:

>100_bases
TGCTACAAACTAATTTGTGAAACTTAGCACTATCTTAATATTTTTTGTTAAAATACTATTTATCTAAATTACATAAAATA
TAAGTTTCTAATGTCTAATT

Product: signal recognition particle receptor FtsY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MFFKKKKNTEIESPIEKVQEKDNKKGLFSRLQAGLSKTANKFGSGLSTILMGQKVVDEELLEDIEMQLLTADVGVEATDE
IVTYLCDKVARNELQTADKLNQIIQQKLTEIILPCEKPLEVDTQKSPFVILVVGVNGVGKTTTIGKLTKKLQSQGKSVIL
AAGDTFRAAAVEQLREWGDRNNTHVVYQHEGADSASVIYNAIGSAKSKGIDVVIADTAGRLHNKDNLMQELKKVVKVIKK
TDETAPHEIMLVVDATTGGNALNQAEAFNQIVNLTGITITKLDGTAKGGIVFSIAKKLGLPLRFIGVGEKIDDLQVFNAR
DFTTALFNSND

Sequences:

>Translated_331_residues
MFFKKKKNTEIESPIEKVQEKDNKKGLFSRLQAGLSKTANKFGSGLSTILMGQKVVDEELLEDIEMQLLTADVGVEATDE
IVTYLCDKVARNELQTADKLNQIIQQKLTEIILPCEKPLEVDTQKSPFVILVVGVNGVGKTTTIGKLTKKLQSQGKSVIL
AAGDTFRAAAVEQLREWGDRNNTHVVYQHEGADSASVIYNAIGSAKSKGIDVVIADTAGRLHNKDNLMQELKKVVKVIKK
TDETAPHEIMLVVDATTGGNALNQAEAFNQIVNLTGITITKLDGTAKGGIVFSIAKKLGLPLRFIGVGEKIDDLQVFNAR
DFTTALFNSND
>Mature_331_residues
MFFKKKKNTEIESPIEKVQEKDNKKGLFSRLQAGLSKTANKFGSGLSTILMGQKVVDEELLEDIEMQLLTADVGVEATDE
IVTYLCDKVARNELQTADKLNQIIQQKLTEIILPCEKPLEVDTQKSPFVILVVGVNGVGKTTTIGKLTKKLQSQGKSVIL
AAGDTFRAAAVEQLREWGDRNNTHVVYQHEGADSASVIYNAIGSAKSKGIDVVIADTAGRLHNKDNLMQELKKVVKVIKK
TDETAPHEIMLVVDATTGGNALNQAEAFNQIVNLTGITITKLDGTAKGGIVFSIAKKLGLPLRFIGVGEKIDDLQVFNAR
DFTTALFNSND

Specific function: Functional homolog of SRP receptor. Probably involved in the reception and insertion of a subset of proteins at the cytoplasmic membrane. Binds to the ribosome in the presence of the SRP particle and a non-hydrolyzable GTP analog. This abolishes trigger f

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI4507215, Length=285, Percent_Identity=29.4736842105263, Blast_Score=126, Evalue=3e-29,
Organism=Homo sapiens, GI295424842, Length=324, Percent_Identity=29.0123456790123, Blast_Score=125, Evalue=5e-29,
Organism=Homo sapiens, GI23308697, Length=324, Percent_Identity=29.0123456790123, Blast_Score=125, Evalue=6e-29,
Organism=Homo sapiens, GI226371618, Length=203, Percent_Identity=33.9901477832512, Blast_Score=121, Evalue=9e-28,
Organism=Homo sapiens, GI89061728, Length=147, Percent_Identity=31.9727891156463, Blast_Score=86, Evalue=7e-17,
Organism=Escherichia coli, GI1789874, Length=325, Percent_Identity=56.6153846153846, Blast_Score=360, Evalue=1e-101,
Organism=Escherichia coli, GI1788963, Length=276, Percent_Identity=33.695652173913, Blast_Score=151, Evalue=6e-38,
Organism=Caenorhabditis elegans, GI193206261, Length=320, Percent_Identity=31.875, Blast_Score=123, Evalue=1e-28,
Organism=Caenorhabditis elegans, GI17539958, Length=290, Percent_Identity=27.5862068965517, Blast_Score=118, Evalue=5e-27,
Organism=Saccharomyces cerevisiae, GI6325345, Length=203, Percent_Identity=34.9753694581281, Blast_Score=127, Evalue=3e-30,
Organism=Saccharomyces cerevisiae, GI6320498, Length=341, Percent_Identity=28.1524926686217, Blast_Score=112, Evalue=7e-26,
Organism=Drosophila melanogaster, GI17647949, Length=285, Percent_Identity=30.1754385964912, Blast_Score=127, Evalue=9e-30,
Organism=Drosophila melanogaster, GI24641198, Length=305, Percent_Identity=30.8196721311475, Blast_Score=120, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 36055; Mature: 36055

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFKKKKNTEIESPIEKVQEKDNKKGLFSRLQAGLSKTANKFGSGLSTILMGQKVVDEEL
CCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LEDIEMQLLTADVGVEATDEIVTYLCDKVARNELQTADKLNQIIQQKLTEIILPCEKPLE
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
VDTQKSPFVILVVGVNGVGKTTTIGKLTKKLQSQGKSVILAAGDTFRAAAVEQLREWGDR
CCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHCCC
NNTHVVYQHEGADSASVIYNAIGSAKSKGIDVVIADTAGRLHNKDNLMQELKKVVKVIKK
CCCEEEEEECCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHH
TDETAPHEIMLVVDATTGGNALNQAEAFNQIVNLTGITITKLDGTAKGGIVFSIAKKLGL
CCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHEEHHHHCC
PLRFIGVGEKIDDLQVFNARDFTTALFNSND
CEEEEECCCCCCCCEEECCCCHHHHHCCCCC
>Mature Secondary Structure
MFFKKKKNTEIESPIEKVQEKDNKKGLFSRLQAGLSKTANKFGSGLSTILMGQKVVDEEL
CCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LEDIEMQLLTADVGVEATDEIVTYLCDKVARNELQTADKLNQIIQQKLTEIILPCEKPLE
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
VDTQKSPFVILVVGVNGVGKTTTIGKLTKKLQSQGKSVILAAGDTFRAAAVEQLREWGDR
CCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHCCC
NNTHVVYQHEGADSASVIYNAIGSAKSKGIDVVIADTAGRLHNKDNLMQELKKVVKVIKK
CCCEEEEEECCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHH
TDETAPHEIMLVVDATTGGNALNQAEAFNQIVNLTGITITKLDGTAKGGIVFSIAKKLGL
CCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHEEHHHHCC
PLRFIGVGEKIDDLQVFNARDFTTALFNSND
CEEEEECCCCCCCCEEECCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3025556; 8041620; 9278503; 2161989; 8194520; 9002525 [H]