Click here to switch to the map view.

The map label for this gene is ybeC [H]

Identifier: 89256917

GI number: 89256917

Start: 1571317

End: 1572819

Strand: Direct

Name: ybeC [H]

Synonym: FTL_1640

Alternate gene names: 89256917

Gene position: 1571317-1572819 (Clockwise)

Preceding gene: 89256916

Following gene: 89256918

Centisome position: 82.88

GC content: 33.6

Gene sequence:

>1503_bases
ATGGAAATTAATACATCCCAAAAAATGTCTTTGTTTAGCGCAATCCTTATTGGAGTGACATCCATGGTTGGCTCTGGATG
GTTATTTAGTGCGCAACTTACAGCAAAAACAGCAGGAAATTGGGCTTTTCTAGCTTGGGTATTAGCTGCAATCATGATTA
TGATGGTTGGTTTATGTTTAGCAAAAGTAGTATCTGTATTTCCAGTAAGAGGTGCTACAACAAGGTCAAGCGCACTATCA
CATAATAGTGTCTTTGCTATGCCCTTCGCTTTTGCTAACTGGTTTGGTATCGTGGTAATGATATCTACAGAAGCGCAAGC
AACAACACAATACCTTGCTGGAATTAAAGGTTTTGAGTGGTTAATGCATAATGGCATTATATCAACTTATGGAATGTTAT
TATCCTTATTTATATTAGTTATTTACCTAATTATTAACTTCTACGGAGTTAAATTACTTGCTAGTGTAAATAATGGTATA
ACTGTGTTTAAAATGTTTGTACCTGCGGCAATAGTTATAATCTTTATCATATACGCTTTTACTCACAGTACCGAGCATCA
TAGTTTGGTTTCTGCAGATATTCCTAACAATAACTTTACAGTTGGTAATGCTTTGACTGCAATAGTTGCTGGTGGTTTGG
TATATACATTTAATGGCTTTCAGATTGTCGTAGCATATAGTAGTGAAATTAAGAATCCTTCAAGAAATGTGCCTCTTGCA
ATTATCTTATCTCTAGCTTTAGTATTACTACTTTATATGGGATTACAATATGCTTTCATGCAAGCTGTACCACATGAGTA
TCTAATCTCAAAAGGTGGTTGGGCTGGTCTAGACTTTGAATCGCCTCTTTTACAAGTAGCTACACTGATAGGTCTTGGTT
ATATAGCCGTTTTATTAATCATAGATAGTATTGTAAGTCCTTCTGCAACAGGTTATAGTTATCTTGGCGCTTCCTCAAGA
ATGTTATATGCAATGTCAGCTGAAGGTCAAATGCCAAGATACTTTGCTAAAATTAACAAACAAGTTAATATTTCAAGAAG
ATCATTAATTGCTAACTTTTTAATTTGTGCTGGTTTCTTAATATTTTCTGATAACTGGGTCGCTCTAATGCTTATTGTGA
CAGGATTTAATATTATTGGTTATATGGCTGCACCTATTAGTATGGGAGCAATTGCACCTAAGACAAGAATATTTGGCATG
ATTGTCTTTGTACTACTAACCATGCTACTAAATACTGTTGAGGTAGAGACTAATATACATCTAAGTATAATTCTTGTTAT
CCTTATGTCGATCTTTGGTATTTTTGAATATCGTAGGGTTGGTTTTAGAAGTTTAGTTATACTAATTATGCCTTTCATAA
TCTTTGTATGTATTATATCACCTATTGATCACACCTATTTTGAAGGTATAATTGGCGCTATATTTTATCTAATAGTTACA
GACAAACGCTATGTAACTTATTGTAAAAAAACAGCTAATCAAGATAACATCGTTGAAGATTAA

Upstream 100 bases:

>100_bases
TAATAACCATAAACTTTTAGCTAAAGATTGTATTGCTAATCATAACTAGTTATGTATATAGTTAAATTATAATAGTATTT
CAGATATAGGATTTTTTGTA

Downstream 100 bases:

>100_bases
GGAGATATCAAAATGAACGAAACAATAAATCAAAATCCTATGGTTAATTTTCTAAAAAAATTTATAAGTTTTAAGAGTTT
TCTTACTCCAAGCATAATTG

Product: amino acid transporter protein, fragment

Products: D-glycine [Cytoplasm]; D-alanine [Cytoplasm]; Proton [Cytoplasm]; D-serine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 500; Mature: 500

Protein sequence:

>500_residues
MEINTSQKMSLFSAILIGVTSMVGSGWLFSAQLTAKTAGNWAFLAWVLAAIMIMMVGLCLAKVVSVFPVRGATTRSSALS
HNSVFAMPFAFANWFGIVVMISTEAQATTQYLAGIKGFEWLMHNGIISTYGMLLSLFILVIYLIINFYGVKLLASVNNGI
TVFKMFVPAAIVIIFIIYAFTHSTEHHSLVSADIPNNNFTVGNALTAIVAGGLVYTFNGFQIVVAYSSEIKNPSRNVPLA
IILSLALVLLLYMGLQYAFMQAVPHEYLISKGGWAGLDFESPLLQVATLIGLGYIAVLLIIDSIVSPSATGYSYLGASSR
MLYAMSAEGQMPRYFAKINKQVNISRRSLIANFLICAGFLIFSDNWVALMLIVTGFNIIGYMAAPISMGAIAPKTRIFGM
IVFVLLTMLLNTVEVETNIHLSIILVILMSIFGIFEYRRVGFRSLVILIMPFIIFVCIISPIDHTYFEGIIGAIFYLIVT
DKRYVTYCKKTANQDNIVED

Sequences:

>Translated_500_residues
MEINTSQKMSLFSAILIGVTSMVGSGWLFSAQLTAKTAGNWAFLAWVLAAIMIMMVGLCLAKVVSVFPVRGATTRSSALS
HNSVFAMPFAFANWFGIVVMISTEAQATTQYLAGIKGFEWLMHNGIISTYGMLLSLFILVIYLIINFYGVKLLASVNNGI
TVFKMFVPAAIVIIFIIYAFTHSTEHHSLVSADIPNNNFTVGNALTAIVAGGLVYTFNGFQIVVAYSSEIKNPSRNVPLA
IILSLALVLLLYMGLQYAFMQAVPHEYLISKGGWAGLDFESPLLQVATLIGLGYIAVLLIIDSIVSPSATGYSYLGASSR
MLYAMSAEGQMPRYFAKINKQVNISRRSLIANFLICAGFLIFSDNWVALMLIVTGFNIIGYMAAPISMGAIAPKTRIFGM
IVFVLLTMLLNTVEVETNIHLSIILVILMSIFGIFEYRRVGFRSLVILIMPFIIFVCIISPIDHTYFEGIIGAIFYLIVT
DKRYVTYCKKTANQDNIVED
>Mature_500_residues
MEINTSQKMSLFSAILIGVTSMVGSGWLFSAQLTAKTAGNWAFLAWVLAAIMIMMVGLCLAKVVSVFPVRGATTRSSALS
HNSVFAMPFAFANWFGIVVMISTEAQATTQYLAGIKGFEWLMHNGIISTYGMLLSLFILVIYLIINFYGVKLLASVNNGI
TVFKMFVPAAIVIIFIIYAFTHSTEHHSLVSADIPNNNFTVGNALTAIVAGGLVYTFNGFQIVVAYSSEIKNPSRNVPLA
IILSLALVLLLYMGLQYAFMQAVPHEYLISKGGWAGLDFESPLLQVATLIGLGYIAVLLIIDSIVSPSATGYSYLGASSR
MLYAMSAEGQMPRYFAKINKQVNISRRSLIANFLICAGFLIFSDNWVALMLIVTGFNIIGYMAAPISMGAIAPKTRIFGM
IVFVLLTMLLNTVEVETNIHLSIILVILMSIFGIFEYRRVGFRSLVILIMPFIIFVCIISPIDHTYFEGIIGAIFYLIVT
DKRYVTYCKKTANQDNIVED

Specific function: Uptake of an yet unknown amino-acid with the concomitant import of a proton [H]

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily. AGT (TC 2.A.3.11) family [H]

Homologues:

Organism=Homo sapiens, GI181337167, Length=356, Percent_Identity=27.8089887640449, Blast_Score=67, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI71995388, Length=384, Percent_Identity=25, Blast_Score=79, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI71995382, Length=384, Percent_Identity=25, Blast_Score=78, Evalue=9e-15,
Organism=Caenorhabditis elegans, GI71982612, Length=358, Percent_Identity=21.2290502793296, Blast_Score=72, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI71982608, Length=358, Percent_Identity=21.2290502793296, Blast_Score=72, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI193208714, Length=363, Percent_Identity=23.1404958677686, Blast_Score=68, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI32566695, Length=363, Percent_Identity=23.1404958677686, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI221331183, Length=367, Percent_Identity=25.3405994550409, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI17647653, Length=367, Percent_Identity=25.3405994550409, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24664379, Length=367, Percent_Identity=25.3405994550409, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24667468, Length=375, Percent_Identity=21.8666666666667, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24666159, Length=354, Percent_Identity=21.4689265536723, Blast_Score=65, Evalue=8e-11,
Organism=Drosophila melanogaster, GI24668806, Length=357, Percent_Identity=22.1288515406162, Blast_Score=65, Evalue=9e-11,
Organism=Drosophila melanogaster, GI21356285, Length=357, Percent_Identity=22.1288515406162, Blast_Score=65, Evalue=9e-11,
Organism=Drosophila melanogaster, GI24668802, Length=357, Percent_Identity=22.1288515406162, Blast_Score=65, Evalue=9e-11,
Organism=Drosophila melanogaster, GI221512776, Length=354, Percent_Identity=21.4689265536723, Blast_Score=65, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 54908; Mature: 54908

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: PS00178 AA_TRNA_LIGASE_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEINTSQKMSLFSAILIGVTSMVGSGWLFSAQLTAKTAGNWAFLAWVLAAIMIMMVGLCL
CCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
AKVVSVFPVRGATTRSSALSHNSVFAMPFAFANWFGIVVMISTEAQATTQYLAGIKGFEW
HHHHHHHCCCCCCCHHHHCCCCCEEEHHHHHHHHEEEEEEEECCHHHHHHHHHHCHHHHH
LMHNGIISTYGMLLSLFILVIYLIINFYGVKLLASVNNGITVFKMFVPAAIVIIFIIYAF
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
THSTEHHSLVSADIPNNNFTVGNALTAIVAGGLVYTFNGFQIVVAYSSEIKNPSRNVPLA
HCCCCCCCEEEEECCCCCEEHHHHHHHHHHCCEEEEECCEEEEEEECHHCCCCCCCCHHH
IILSLALVLLLYMGLQYAFMQAVPHEYLISKGGWAGLDFESPLLQVATLIGLGYIAVLLI
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
IDSIVSPSATGYSYLGASSRMLYAMSAEGQMPRYFAKINKQVNISRRSLIANFLICAGFL
HHHHCCCCCCCCHHCCCCCCEEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
IFSDNWVALMLIVTGFNIIGYMAAPISMGAIAPKTRIFGMIVFVLLTMLLNTVEVETNIH
HCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCH
LSIILVILMSIFGIFEYRRVGFRSLVILIMPFIIFVCIISPIDHTYFEGIIGAIFYLIVT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHC
DKRYVTYCKKTANQDNIVED
CCHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MEINTSQKMSLFSAILIGVTSMVGSGWLFSAQLTAKTAGNWAFLAWVLAAIMIMMVGLCL
CCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
AKVVSVFPVRGATTRSSALSHNSVFAMPFAFANWFGIVVMISTEAQATTQYLAGIKGFEW
HHHHHHHCCCCCCCHHHHCCCCCEEEHHHHHHHHEEEEEEEECCHHHHHHHHHHCHHHHH
LMHNGIISTYGMLLSLFILVIYLIINFYGVKLLASVNNGITVFKMFVPAAIVIIFIIYAF
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
THSTEHHSLVSADIPNNNFTVGNALTAIVAGGLVYTFNGFQIVVAYSSEIKNPSRNVPLA
HCCCCCCCEEEEECCCCCEEHHHHHHHHHHCCEEEEECCEEEEEEECHHCCCCCCCCHHH
IILSLALVLLLYMGLQYAFMQAVPHEYLISKGGWAGLDFESPLLQVATLIGLGYIAVLLI
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
IDSIVSPSATGYSYLGASSRMLYAMSAEGQMPRYFAKINKQVNISRRSLIANFLICAGFL
HHHHCCCCCCCCHHCCCCCCEEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
IFSDNWVALMLIVTGFNIIGYMAAPISMGAIAPKTRIFGMIVFVLLTMLLNTVEVETNIH
HCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCH
LSIILVILMSIFGIFEYRRVGFRSLVILIMPFIIFVCIISPIDHTYFEGIIGAIFYLIVT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHC
DKRYVTYCKKTANQDNIVED
CCHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: D-glycine [Periplasm]; D-alanine [Periplasm]; Proton [Periplasm]; D-serine [Periplasm] [C]

Specific reaction: Proton [Periplasm] + D-glycine [Periplasm] = Proton [Cytoplasm] + D-glycine [Cytoplasm] Proton [Periplasm] + D-alanine [Periplasm] = Proton [Cytoplasm] + D-alanine [Cytoplasm] Proton [Periplasm] + D-serine [Periplasm] = Proton [Cytoplasm] + D-serine [Cyto

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377; 12730183 [H]