LOCUS NC_007791 4439 bp DNA circular BCT 06-APR-2009 DEFINITION Staphylococcus aureus subsp. aureus USA300_FPR3757 plasmid pUSA02, complete sequence. ACCESSION NC_007791 VERSION NC_007791.1 GI:87159843 DBLINK Project:16313 KEYWORDS . SOURCE Staphylococcus aureus subsp. aureus USA300_FPR3757 ORGANISM Staphylococcus aureus subsp. aureus USA300_FPR3757 Bacteria; Firmicutes; Bacillales; Staphylococcus. REFERENCE 1 (bases 1 to 4439) AUTHORS Diep,B.A., Gill,S.R., Chang,R.F., Phan,T.H., Chen,J.H., Davidson,M.G., Lin,F., Lin,J., Carleton,H.A., Mongodin,E.F., Sensabaugh,G.F. and Perdreau-Remington,F. TITLE Complete genome sequence of USA300, an epidemic clone of community-acquired meticillin-resistant Staphylococcus aureus JOURNAL Lancet 367 (9512), 731-739 (2006) PUBMED 16517273 REFERENCE 2 (bases 1 to 4439) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (11-FEB-2006) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 4439) AUTHORS Diep,B.A., Gill,S.R., Chang,R.F., Phan,T.H., Chen,J.H., Davidson,M.G., Lin,F., Lin,J., Carleton,H.A., Mongodin,E.F., Sensabaugh,G.F. and Perdreau-Remington,F. TITLE Direct Submission JOURNAL Submitted (30-JAN-2006) Department of Medicine, University of California, San Francisco, San Francisco, CA 94143, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000257. COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..4439 /organism="Staphylococcus aureus subsp. aureus USA300_FPR3757" /mol_type="genomic DNA" /strain="USA300; FPR3757" /sub_species="aureus" /db_xref="taxon:451515" /plasmid="pUSA02" gene 36..1415 /locus_tag="SAUSA300_pUSA020001" /db_xref="GeneID:3912723" CDS 36..1415 /locus_tag="SAUSA300_pUSA020001" /note="identified by similarity to SP:P23054; match to protein family HMM PF07690" /codon_start=1 /transl_table=11 /product="tetracycline resistance protein" /protein_id="YP_492684.1" /db_xref="GI:87159845" /db_xref="GeneID:3912723" /translation="MFSLYKKFKGLFYSVLFWLCILSFFSVLNEMVLNVSLPDIANHF NTTPGITNWVNTAYMLTFSIGTAVYGKLSDYINIKKLLIIGISLSCLGSLIAFIGHNH FFILIFGRLVQGVGSAAFPSLIMVVVARNITRKKQGKAFGFIGSIVALGEGLGPSIGG IIAHYIHWSYLLILPMITIVTIPFLIKVMVPGKSTKNTLDIVGIVLMSISIICFMLFT TNYNWTFLILFTIFFVIFIKHISRVSNPFINPKLGKNIPFMLGLFSGGLIFSIVAGFI SMVPYMMKTIYHVNVATIGNSVIFPGTMSVIVFGYFGGFLVDRKGSLFVFILGSLSIS ISFLTIAFFVEFSMWLTTFMFIFVMGGLSFTKTVISKIVSSSLSEEEVASGMSLLNFT SFLSEGTGIAIVGGLLSLQLINRKLVLEFINYSSGVYSNILVAMAILIILCCLLTIIV FKRSKKQFE" gene 1601..2842 /locus_tag="SAUSA300_pUSA020002" /db_xref="GeneID:3912724" CDS 1601..2842 /locus_tag="SAUSA300_pUSA020002" /note="identified by similarity to SP:P03864; match to protein family HMM PF01076" /codon_start=1 /transl_table=11 /product="plasmid recombination enzyme" /protein_id="YP_492685.1" /db_xref="GI:87159846" /db_xref="GeneID:3912724" /translation="MSYSIVRVSKVKSGTNTTGIQKHVQRENNNYENEDIDHSKTYLN YDLVNANKQNFNNLIDEKIEQNYTGKRKIRTDAIKHIDGLITSDNDFFDNQTPEDTKQ FFEYAKEFLEQEYGKDNLLYATVHMDEKTPHMHYGVVPITDDGRLSAKEVVGNKKALT AFQDRFNEHVKQRGYDLERGQSRQVTNAKHEQISQYKQKTEYHKQEYERESQKTDHIK QKNDKLMQEYQKSLNTLKKPINVPYEQETEKVGGLFSKEIQETGNVVISQKDFNEFQK QIKAAQDISEDYEYIKSGRALDDKDKEIREKDDLLNKAVERIENADDNFNQLYENAKP LKENIEIALKLLKILLKELERVLGRNTFAERVNKLTEDEPKLNGLAGNLDKKMNPELY SEQEQQQEQQKNQKRDRGMHL" gene 3369..4313 /locus_tag="SAUSA300_pUSA020003" /db_xref="GeneID:3912722" CDS 3369..4313 /locus_tag="SAUSA300_pUSA020003" /note="identified by match to protein family HMM PF02486" /codon_start=1 /transl_table=11 /product="replication initiation protein" /protein_id="YP_492686.1" /db_xref="GI:87159844" /db_xref="GeneID:3912722" /translation="MYKNNHANHSNHLENHDLDNFSKTGYSNSRLDAHTVCISDPKLS FDAMTIVGNLNRDNAQALSKFMSVEPQIRLWDILQTKFKAKALQEKVYIEYDKVKADS WDRRNMRIEFNPNKLTRDEMIWLKQNIISYMEDDGFTRLDLAFDFEDDLSDYYAMSDK AVKKTIFYGRNGKPETKYFGVRDSNRFIRIYNKKKERKDNADAEVMSEHLWRVEIELK RDMVDYWNDCFSDLHILQPDWKTIQRTADRAIVFMLLSDEEEWGKLHRNSRTKYKNLI KEISPVDLTDLMKSTLKANEKQLQKQIDFWQHEFKFWK" ORIGIN 1 tataaacttt agtcacctca agtaaagagg taaaattgtt tagtttatat aaaaaattta 61 aaggtttgtt ttatagcgtt ttattttggc tttgtattct ttcatttttt agtgtattaa 121 atgaaatggt tttaaatgtt tctttacctg atattgcaaa tcattttaat actactcctg 181 gaattacaaa ctgggtaaac actgcatata tgttaacttt ttcgatagga acagcagtat 241 atggaaaatt atctgattat ataaatataa aaaaattgtt aattattggt attagtttga 301 gctgtcttgg ttcattgatt gcttttattg gtcacaatca cttttttatt ttgatttttg 361 gtaggttagt acaaggagta ggatctgctg cattcccttc actgattatg gtggttgtag 421 ctagaaatat tacaagaaaa aaacaaggca aagcctttgg ttttatagga tcaattgtag 481 ctttaggtga agggttaggt ccttcaatag ggggaataat agcacattat attcattggt 541 cttacctact tatacttcct atgattacaa tagtaactat accttttctt attaaagtaa 601 tggtacctgg taaatcaaca aaaaatacat tagatatcgt aggtattgtt ttaatgtcta 661 taagtattat atgttttatg ttatttacga caaattataa ttggactttt ttaatactct 721 tcacaatctt ttttgtgatt tttattaaac atatttcaag agtttctaac ccttttatta 781 atcctaaact agggaaaaac attccgttta tgcttggttt gttttctggt gggctaatat 841 tttctatagt agctggtttt atatcaatgg tgccttatat gatgaaaact atttatcatg 901 taaatgtagc gacaataggt aatagtgtta tttttcctgg aaccatgagt gttattgttt 961 ttggttattt tggtggtttt ttagtggata gaaaaggatc attatttgtt tttattttag 1021 gatcattgtc tatctctata agttttttaa ctattgcatt ttttgttgag tttagtatgt 1081 ggttgactac ttttatgttt atatttgtta tgggcggatt atcttttact aaaacagtta 1141 tatcaaaaat agtatcaagt agtctttctg aagaagaagt tgcttctgga atgagtttgc 1201 taaatttcac aagtttttta tcagagggaa caggtatagc aattgtagga ggtttattgt 1261 cactacaatt gattaatcgt aaactagttc tggaatttat aaattattct tctggagtgt 1321 atagtaatat tcttgtagcc atggctatcc ttattatttt atgttgtctt ttgacgatta 1381 ttgtatttaa acgttctaaa aagcagtttg aatagttata ttatattttg gtttagaact 1441 atgagtggct agcattttgc cactcatttt ttgcgttagc aaaaacaggt ttaagcctcg 1501 cagagcacac gtattaacga cttattaaaa ataagtctag tgtgttagac ttaaactatt 1561 aaatacacat gaaacctttg tgcttaggag tgatttttat atgtcttatt ccattgttag 1621 agtttcaaaa gttaaatctg gaacaaatac aacgggcata caaaaacatg ttcaaagaga 1681 aaataataat tatgaaaatg aagatataga ccatagtaaa acttacttaa attatgattt 1741 ggtaaatgct aataaacaga attttaataa cttgattgat gaaaaaatcg aacagaatta 1801 tacaggcaaa agaaaaatta gaacagacgc gattaaacac attgatggtt taattacatc 1861 agacaatgat ttctttgata atcaaacgcc agaagataca aagcagtttt ttgaatatgc 1921 taaagagttt ttagaacaag aatacggtaa agataattta ttatatgcaa cagttcacat 1981 ggacgaaaaa acaccacata tgcattatgg cgttgttcca ataactgatg atggtcgttt 2041 aagtgctaaa gaagttgtag gtaataaaaa agctttaaca gcgtttcaag atagatttaa 2101 tgagcatgtt aaacaacgag gatatgattt agaacgtggg caatcaagac aagtaacaaa 2161 tgctaaacat gagcaaataa gtcagtataa acaaaaaaca gaatatcata agcaagaata 2221 tgaacgtgag agccaaaaaa cagaccatat aaagcaaaag aacgataaat taatgcaaga 2281 gtaccaaaaa tcgttaaata cgcttaaaaa gcctataaat gttccgtatg agcaagaaac 2341 tgaaaaagta ggtggtttat ttagcaaaga aatacaagaa actggaaatg ttgtaataag 2401 ccaaaaagat ttcaatgaat ttcagaaaca gataaaagct gctcaagata tttcggaaga 2461 ttacgagtat ataaagtctg gtagagcctt agatgataaa gataaggaaa tacgagagaa 2521 agatgattta ttaaataaag cagttgagcg tattgaaaac gcagacgata attttaacca 2581 actttacgaa aatgcaaagc cacttaaaga gaatatagaa atagcgttaa agcttttaaa 2641 aatcttacta aaagagttag aacgagtttt aggaagaaat acctttgcgg aaagagttaa 2701 taagttaaca gaagatgaac caaaactaaa tggtttagca ggaaacttag ataaaaaaat 2761 gaatccagaa ttatattcag aacaggaaca gcaacaagaa caacaaaaga atcaaaaacg 2821 agatagaggt atgcacttat agaacatgca tttatgccga gaaaacttat tggttggaat 2881 gggctatgtg ttagctaact tgttagcgag ttggttggac ttgaattggg attaatccca 2941 agaaagtacc aactcaacaa cacataaagc cctgtaggtt ccgaccaata aggaaattgg 3001 aataaagcaa taaaaggagt tgaagaaatg aaattcagag aagcctttga gaattttata 3061 acaagtaagt atgtacttgg tgttttagta gttttaactg tttaccagat aatacaaatg 3121 cttaaataaa aaaagacttg atctgattag accaagtctt ttgatagtgt tatattaata 3181 acaaaataaa aaggagtcgc tcacgccctg accaaagttt gtgaacgaca tcattcaaag 3241 aaaaaaacac tgagttattt ttataatctt gtatatttag atattaaacg atatttaaat 3301 atacatcaag atatatattt gggtgagcga ttccttaaac gaaattgaga ttaaggagtc 3361 gattttttat gtataaaaac aatcatgcaa atcattcaaa tcatttggaa aatcacgatt 3421 tagacaattt ttctaaaacc ggctactcta atagccggtt ggacgcacat actgtgtgca 3481 tatctgatcc aaaattaagt tttgatgcaa tgacgatcgt tggaaatctc aaccgagaca 3541 acgctcaagc cctttctaaa tttatgagtg tagagcccca aataagactt tgggatattc 3601 ttcaaacaaa gtttaaagct aaagcacttc aagaaaaagt ttatattgaa tatgacaaag 3661 tgaaagcaga tagttgggat agacgtaata tgcgtattga atttaatcca aacaaactta 3721 cacgagatga aatgatttgg ttaaaacaaa atataataag ctacatggaa gatgacggtt 3781 ttacaagatt agatttagcc tttgattttg aagatgattt gagtgactac tatgcaatgt 3841 ctgataaagc agttaagaaa actatttttt atggtcgtaa tggtaagcca gaaacaaaat 3901 attttggcgt gagagatagt aatagattta ttagaattta taataaaaag aaagaacgta 3961 aagataatgc agatgctgaa gttatgtctg aacatttatg gcgtgtagaa atcgaactta 4021 aaagagatat ggtggattac tggaatgatt gctttagtga tttacatatc ttgcaaccag 4081 attggaaaac tatccaacgc actgcggata gagcaatagt ttttatgtta ttgagtgatg 4141 aagaagaatg gggaaagctt cacagaaatt ctagaacaaa atataagaat ttgataaaag 4201 aaatttcgcc agtcgattta acggacttaa tgaaatcgac tttaaaagcg aacgaaaaac 4261 aattgcaaaa acaaatcgat ttttggcaac atgaatttaa attttggaaa tagtgtacat 4321 attaatatta ctgaacaaaa atgatatatt taaactattc taatttagga ggattttttt 4381 atgaagtgtc tatttaaaaa tttggggaat ttatatgagg tgaaagaata atttacccc //