LOCUS NC_007719 5104 bp DNA circular BCT 25-JUL-2008 DEFINITION Aster yellows witches'-broom phytoplasma AYWB plasmid pAYWB-III, complete sequence. ACCESSION NC_007719 VERSION NC_007719.1 GI:85057963 DBLINK Project:13478 KEYWORDS . SOURCE Aster yellows witches'-broom phytoplasma AYWB ORGANISM Aster yellows witches'-broom phytoplasma AYWB Bacteria; Tenericutes; Mollicutes; Acholeplasmatales; Acholeplasmataceae; Candidatus Phytoplasma; Candidatus Phytoplasma asteris. REFERENCE 1 (bases 1 to 5104) AUTHORS Bai,X., Zhang,J., Ewing,A., Miller,S.A., Jancso Radek,A., Shevchenko,D.V., Tsukerman,K., Walunas,T., Lapidus,A., Campbell,J.W. and Hogenhout,S.A. TITLE Living with genome instability: the adaptation of phytoplasmas to diverse environments of their insect and plant hosts JOURNAL J. Bacteriol. 188 (10), 3682-3696 (2006) PUBMED 16672622 REFERENCE 2 (bases 1 to 5104) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (18-JAN-2006) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 5104) AUTHORS Bai,X. and Hogenhout,S.A. TITLE Direct Submission JOURNAL Submitted (06-APR-2005) Department of Entomology, The Ohio State University - OARDC, 1680 Madison Avenue, Wooster, OH 44691, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000064. COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..5104 /organism="Aster yellows witches'-broom phytoplasma AYWB" /mol_type="genomic DNA" /host="Lactuca sativa" /db_xref="taxon:322098" /plasmid="pAYWB-III" misc_feature 1..5104 /note="Sequencing Center: Integrated Genomics, Inc., 2201 W. Campbell Park Dr., Chicago IL 60612" gene 1..1107 /gene="repA" /locus_tag="AYWB_pIII01" /note="pAYWBIII01" /db_xref="GeneID:3866196" CDS 1..1107 /gene="repA" /locus_tag="AYWB_pIII01" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_456877.1" /db_xref="GI:85057964" /db_xref="GeneID:3866196" /translation="MKKTKFQKNAKDIFLTYSKCPLGKDKIHNYIKEIMISKKQEISY IISNTENHQDHKEIHTHVLFQLTKRFNIQSDRFFDIEGFHPRIETARNIEKSISYIKK DGDFIEEGTPRHKKYVRQNQKEERKQLIYDEIDRLIEKYYHDDKLTLNQVKKSLNDFI KILDRDFYYEKIDFVEQVLNKKFTKKKEELEDEEEFFKPDYSFDSFKSNSKTNEIIEA INQQLSVQSLGKRPKSIVIEGPSRLGKTEFILSYLTHINLHYNYTRGEFDFSKQNHKN AYKINIFDDISLTRIRKEGLIKDIIGGQKGFSYNVKYAPKRTIAGKKLSIFLVNPDIS FENYCEWSRNKGYKYHEYLEDNCIFIYVPDKLYH" gene complement(2542..3165) /locus_tag="AYWB_pIII02" /note="pAYWBIII02" /db_xref="GeneID:3866197" CDS complement(2542..3165) /locus_tag="AYWB_pIII02" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_456878.1" /db_xref="GI:85057965" /db_xref="GeneID:3866197" /translation="MNFFNKNKKINLKKIILLITSVFLILINFKINNIFSMKSEKDLK KENENTINNNNLKDDTDYQFFKKKVLDPAKEKNNNNLKEGLAYFLNLMGIDGFKKEAE DLIKNYLKENIKKLNDSSEKFFESFTSTNNNLKDDTDYQFYKKEVLDKFETKQYEIFK EKIIDFIISPDTTEDKIKYALNQLVDECVNHNEEIIDKLSETFFDWE" gene 3278..3694 /locus_tag="AYWB_pIII03" /note="pAYWBIII03" /db_xref="GeneID:3866198" CDS 3278..3694 /locus_tag="AYWB_pIII03" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_456879.1" /db_xref="GI:85057966" /db_xref="GeneID:3866198" /translation="MQILSFNIDQFILKINDYATIIISFLKNTFNNIIAIKNCNFFNL LNSTGIIINFLFSILYILIFITLLVFLCSIFNIIKTIIKWILYPFKLLIICIIKIISK LIPKSSIKQSITIDKYLIELQENISDLESKNNLMMK" gene 3733..3885 /locus_tag="AYWB_pIII04" /note="pAYWBIII04" /db_xref="GeneID:3866199" CDS 3733..3885 /locus_tag="AYWB_pIII04" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_456880.1" /db_xref="GI:85057967" /db_xref="GeneID:3866199" /translation="MENNNKPKSKKKIFIIWGLFISGVILVLLMLLLLAINKPQPKIE KLNQQH" gene 3933..4208 /locus_tag="AYWB_pIII05" /note="pAYWBIII05" /db_xref="GeneID:3866200" CDS 3933..4208 /locus_tag="AYWB_pIII05" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_456881.1" /db_xref="GI:85057968" /db_xref="GeneID:3866200" /translation="MNKIEKEVDKLTQQQEQTPSLKYPPKTYYQNDGIKIRNIQEHNQ NTGIIKKSTHFYDDGKTIRKINEYNDFNLIKEIYYNQDGTIKETKTF" gene 4211..4582 /locus_tag="AYWB_pIII06" /note="pAYWBIII06" /db_xref="GeneID:3866201" CDS 4211..4582 /locus_tag="AYWB_pIII06" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_456882.1" /db_xref="GI:85057969" /db_xref="GeneID:3866201" /translation="MNKKRKIILKIWIIFISILILIMLFLLGLKLPKLLKSKQQQDNN KVETQFPYQNQYIHDTNKFENIIGLMNSLKRLKELKKQQKEIKQQQKQTEYQYKTEFD DENKLVKDIAVVNPFSRLAQL" gene 4678..5052 /gene="ssb" /locus_tag="AYWB_pIII07" /note="pAYWBIII07" /db_xref="GeneID:3866202" CDS 4678..5052 /gene="ssb" /locus_tag="AYWB_pIII07" /codon_start=1 /transl_table=11 /product="single-stranded DNA binding protein" /protein_id="YP_456883.1" /db_xref="GI:85057970" /db_xref="GeneID:3866202" /translation="MLNKVQLIGNITHDLEPTHINTNEGQISKLDFQIAVNNKDKTQF IPCVVFRNQAENMSMYLHKGSKVYLEGTLSIEKYTNNEGENKTATKVIVQKVIFLDSK NVKQVIEKEPKSSFDDWVKLNN" ORIGIN 1 atgaaaaaaa ctaagtttca aaaaaatgca aaagacatct ttttaactta ttcaaaatgt 61 cctttaggta aagataaaat tcataattat ataaaagaaa taatgatatc taaaaaacaa 121 gaaatttcat atatcatttc taatactgaa aaccatcaag accataaaga aatacatact 181 catgttcttt ttcaattaac taaacgtttt aatattcaaa gtgatagatt ctttgacatt 241 gaaggtttcc atcctagaat tgaaactgct cgtaatatag aaaaatcaat ttcttatata 301 aaaaaagatg gcgacttcat tgaagaaggc acccctagac ataaaaaata tgttcgtcaa 361 aatcaaaaag aagaacgtaa acaattaata tatgatgaaa tagacagatt aatagaaaaa 421 tattatcatg atgataaatt aactttaaat caagttaaaa aatctcttaa tgattttatt 481 aaaattctag accgtgattt ttattacgaa aaaatagatt ttgtagaaca agttttaaat 541 aaaaaattca ctaaaaaaaa agaagagtta gaagatgaag aagaattttt caaacctgat 601 tattctttcg attcattcaa atctaactct aaaactaatg agataattga ggctataaat 661 caacaattat cagttcaatc attaggcaaa cgacctaaat ccattgttat tgaaggacct 721 agtagactcg gtaaaaccga gtttatatta agttatctaa cccacataaa ccttcactat 781 aattatacca gaggtgaatt tgattttagt aaacaaaatc ataaaaatgc ttataaaatc 841 aatatttttg atgacataag tcttactaga attagaaaag aaggtttgat aaaagatatt 901 ataggtggtc aaaaaggatt tagttataat gtcaaatatg ctcctaaaag aactatagct 961 ggaaagaagt taagtatctt tttagttaat cctgatatct catttgaaaa ttattgtgaa 1021 tggtctcgca ataaaggata taaatatcat gaatatctag aagataattg tattttcata 1081 tatgttcctg ataagttata tcactaataa atgaaataac ttaaaattat taaaaaaagg 1141 agaaaaaaat gactggtttg gaacttttta taactctttt agtaatggga tctttatata 1201 tttttatcac ttgtaaataa ttgataaaat taaaattaga aagttatttt gaatatgtat 1261 ttaagcttaa aaaaaataaa atttagttct aaattttatt taattatatt tatttttatt 1321 tatttattat taaattttta tcaaaaaaat ttagtttttg ctatgaagaa taataattca 1381 aattatattg tagaacaaga tttaatacca aaaaaaagta atgattctga aatgattgat 1441 attaaaattt tagacaaata ttcagaaaca gaaaatgaaa cgaaagaaat aataatatca 1501 tttaaaaaat ttctacatag aataagaata atacaagaaa taacacaaca aaatataaat 1561 aaactaatat atacattgaa taaaatgaaa aaaattatta atattttaga aaccaataat 1621 aaaaatttag aagatgaaaa taaaaaatta agagaagaag ttaacttatt aaagaatctt 1681 aaataaatta aaaatcaata aaaaataagc ccctaattta ataggggctt taaaaatata 1741 aaaattgtct tcctcgaaat gttaatttta ttcaatatat caattttata atacctctaa 1801 aacgaattat tttatacata tattcaattt taaattaaat taattataac aggtatccaa 1861 atacgagcag agcgaactag gctgccagcc gaagaacatt acaattaatc tattacaccc 1921 tttcctataa agtccactct gtttatttag tgttttttta cattaaaaat tcgttaggtt 1981 tttcctcaat gtaactgtca aactttataa tataagttaa atgtgtatgc tttttttcat 2041 tttactaggt atttacttac ttatgtgcgc gtgctgtaag attccagcgt aagcgcacat 2101 aaggtttttc ctaatgattt ttttttatac atatagcata cacattgcaa tgtgtatgct 2161 ttttttaaaa tgtgtatgct tttttaattt cctcttttct ccttacctgt gaactatcgg 2221 gtaaggagta gcgagaacga aacaaccgcc tttgctgctt taggcagtaa aggagtaggt 2281 tggagagtcc atttaaaata ttaaaataat atatttttgg tataatataa gtgtatttac 2341 ttggactctt atttaaagtt tattttttac atctaaaaaa tgttaaaatt ataaatgact 2401 ctatatatat gttcgtccaa gtacgtatat gtagggtcat ttttgttata ttaagctata 2461 ttaaaaaaat ataaaaaaat aactccctat tattttaggg agttatataa taaataaaat 2521 atcaaaaaac aaaattaata attattccca atcaaaaaaa gtttcactta atttatcaat 2581 tatttcttca ttatgattta cacattcatc aacaagttgg ttcaatgcat attttatctt 2641 atcttcagta gtatctggtg atataataaa atcaattatt ttttctttaa atatttcata 2701 ttgttttgtt tcaaatttat ctaatacttc ctttttataa aattgataat ctgtgtcatc 2761 ttttaaatta ttatttgttg aagtaaaact ttcaaagaat ttttcagatg aatcattaag 2821 ttttttaata ttttctttca aataattttt aataagatct tcagcttctt ttttaaaacc 2881 atctatgccc attaaattta gaaaataagc taaaccttct tttaaattat tattattttt 2941 ttcttttgca ggatccaata cttttttttt aaaaaattga taatctgtgt catcttttaa 3001 attattatta tttattgtat tttcattctc tttttttaaa tctttttctg atttcataga 3061 aaaaatattg ttaattttaa aattaattaa aattaaaaaa actgaagtta ttagtaaaat 3121 tatttttttt aagttaattt ttttattttt attaaaaaaa ttcattttta aaaaacctct 3181 ttttttatat atttatatta aaaaaaaaat agctatataa atcctttttc tcatcaaaga 3241 aaattttata taactatcca cgaaaggatg cataaaaatg caaatattaa gttttaacat 3301 agatcaattt attttgaaaa taaatgacta tgccactatt attatatcat tccttaaaaa 3361 cacttttaac aatataattg ctattaaaaa ttgtaatttt tttaatttat taaatagtac 3421 aggaataata attaattttc ttttttctat attatatatt ttaatattta ttaccttatt 3481 agttttttta tgttctatct ttaacattat aaaaacaata atcaaatgga ttttatatcc 3541 gtttaaatta ttaattatat gtattataaa aattataagt aaattaattc ctaaatcatc 3601 tattaaacaa tcaattacaa ttgataaata tttaattgaa ttacaagaaa atatatctga 3661 tttagaatct aaaaacaatt taatgatgaa ataatacatt aaaaaaaaca acaatcaaag 3721 gagataataa aattggaaaa caacaacaaa ccaaaatcaa aaaaaaaaat atttatcatt 3781 tggggtttat ttattagtgg agttattctt gttcttttaa tgcttctttt attagctatc 3841 aataaacctc aacctaaaat agaaaaacta aatcaacaac attaaaatct aatattaatg 3901 ccgaacaaga acaagaaacc tataatagac ttatgaataa aattgaaaaa gaagttgata 3961 aattaaccca acaacaagaa caaactccat cacttaaata tcctcctaaa acttattatc 4021 aaaatgatgg tataaaaatt agaaatattc aagaacataa ccaaaacaca gggattatta 4081 aaaaatcaac tcatttttat gatgatggca aaacaattag aaaaattaat gaatataatg 4141 attttaactt aattaaagaa atttattaca accaagatgg aactattaaa gaaactaaaa 4201 cattttaatc atgaataaaa aaagaaaaat tatattaaag atttggatta tatttatatc 4261 aattcttatt ttaatcatgt tatttctttt aggtttaaaa ttacctaaat tacttaaatc 4321 aaaacaacaa caagataata ataaagttga aactcaattt ccatatcaaa accaatatat 4381 tcatgatact aataaatttg aaaatataat tggtttaatg aattctttaa aacgtttaaa 4441 agaattaaaa aaacaacaaa aagaaataaa acaacagcaa aaacaaactg aatatcaata 4501 taaaaccgaa tttgatgatg aaaataaatt agttaaagat atagcagttg taaacccttt 4561 ctcacgactg gcgcagttgt aattggttgt ctatttctag ctcctatttt tgcatctgta 4621 gttccaattg cagctcctgt tgctttatta ctttaatatt aagaaaggag aaatcaaatg 4681 ttaaataaag ttcaattaat aggtaatata actcatgact tagagccaac acatattaat 4741 actaatgagg gtcaaatatc taaattagat tttcaaatag ctgtaaataa taaagataaa 4801 actcaattca ttccatgtgt tgtttttaga aaccaagctg aaaacatgag tatgtattta 4861 cataaaggtt caaaagtata tttagaagga acgttatcaa ttgaaaaata taccaataac 4921 gaaggcgaaa ataaaactgc tactaaagta atagttcaaa aagttatttt tttagatagt 4981 aaaaatgtta aacaagtaat tgaaaaggaa cctaaatcat catttgatga ttgggtaaaa 5041 ttaaataatt aataaaacaa aggcccctat ttaattaggg gcttatacaa gaaagagttt 5101 ataa //