LOCUS NC_007718 4009 bp DNA circular BCT 18-MAY-2006 DEFINITION Aster yellows witches'-broom phytoplasma AYWB plasmid pAYWB-II, complete sequence. ACCESSION NC_007718 VERSION NC_007718.1 GI:85057958 DBLINK Project:13478 KEYWORDS . SOURCE Aster yellows witches'-broom phytoplasma AYWB ORGANISM Aster yellows witches'-broom phytoplasma AYWB Bacteria; Tenericutes; Mollicutes; Acholeplasmatales; Acholeplasmataceae; Candidatus Phytoplasma; Candidatus Phytoplasma asteris. REFERENCE 1 (bases 1 to 4009) AUTHORS Bai,X., Zhang,J., Ewing,A., Miller,S.A., Jancso Radek,A., Shevchenko,D.V., Tsukerman,K., Walunas,T., Lapidus,A., Campbell,J.W. and Hogenhout,S.A. TITLE Living with genome instability: the adaptation of phytoplasmas to diverse environments of their insect and plant hosts JOURNAL J. Bacteriol. 188 (10), 3682-3696 (2006) PUBMED 16672622 REFERENCE 2 (bases 1 to 4009) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (18-JAN-2006) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 4009) AUTHORS Bai,X. and Hogenhout,S.A. TITLE Direct Submission JOURNAL Submitted (06-APR-2005) Department of Entomology, The Ohio State University - OARDC, 1680 Madison Avenue, Wooster, OH 44691, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000063. COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..4009 /organism="Aster yellows witches'-broom phytoplasma AYWB" /mol_type="genomic DNA" /host="Lactuca sativa" /db_xref="taxon:322098" /plasmid="pAYWB-II" misc_feature 1..4009 /note="Sequencing Center: Integrated Genomics, Inc., 2201 W. Campbell Park Dr., Chicago IL 60612" gene 1..1149 /gene="rep" /locus_tag="AYWB_pII01" /note="pAYWBII01" /db_xref="GeneID:3866192" CDS 1..1149 /gene="rep" /locus_tag="AYWB_pII01" /codon_start=1 /transl_table=11 /product="replication protein" /protein_id="YP_456873.1" /db_xref="GI:85057959" /db_xref="GeneID:3866192" /translation="MKLRICELVINANKITKSKIENILELKKKAIQNYAYILHDKDTY QNEKEAQLNGKKIGDLKSPHYHIYLRFNYAYDTKHIAQWFNTQDNFVSKIKGRFSDAL MYMTHANSSDKHQYDEKAVVSDFDWKSEIQKTNLNKQFKMNYARLKEINSQIISGEIK EYNIDERINVDEYYVYSAAIEKAFKYRVITLKRIKRQMECVFITGQSGSGKSTLAKKI AKDNKYNAYISSGSNDILDDYRGEECIILDDLRSNCLGLSDLLKMLDNNTASSVKSRY KNKVLECKLIIITTVKSIDDFFEDIFRKDETIIQLKRRCTYYIEIDSKYIYYSYWDSI QNKYDLLNKEPNNLLNEFKIKSLSKQEARLKFKKSLKINLPTKDKDDI" gene 1441..1911 /locus_tag="AYWB_pII02" /note="pAYWBII02" /db_xref="GeneID:3866193" CDS 1441..1911 /locus_tag="AYWB_pII02" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_456874.1" /db_xref="GI:85057960" /db_xref="GeneID:3866193" /translation="MQNLNLNIDAFIDKINYYVIYIITFLKYVFNSIIAIKNVDFSLF NIPNSIGIICHFLFAIFCILIFITLLVFLGSIWNIIKTIIKWILYPFKLLFKLIKWIF SPKSELKQPIKTNNLNQYDLNKLQRKINDLEYKLNLQKRQNVIKPFENKYQKRG" gene 1915..2397 /locus_tag="AYWB_pII03" /note="pAYWBII03" /db_xref="GeneID:3866194" CDS 1915..2397 /locus_tag="AYWB_pII03" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_456875.1" /db_xref="GI:85057961" /db_xref="GeneID:3866194" /translation="MKNNNHKNPKNKIFIIWGLFISGVILVFLILLLLAINKPQPKTD TQNQQHLQSNINAEQEQQTYNRVINKIESEIDKLTQQQEQTPLLKYPPKIRYYDDGIK IFSIEKYNQDTGKLIKDIYYKNDGETIEYTVDYNSDGSILNTFYNPDGTVRDTYHSNE" gene 3013..3327 /gene="ssb" /locus_tag="AYWB_pII04" /note="pAYWBII04" /db_xref="GeneID:3866195" CDS 3013..3327 /gene="ssb" /locus_tag="AYWB_pII04" /codon_start=1 /transl_table=11 /product="single-stranded DNA binding protein" /protein_id="YP_456876.1" /db_xref="GI:85057962" /db_xref="GeneID:3866195" /translation="MLNKVQLIGNITHDLEPTHINTNEGQISKLDFQIAVNNKDKTQF IPCVIFRNQAENMSMYLHKGSKVYLEGTLSIEKYTNNEGENKTATKVIVQKVIFLDNK DK" ORIGIN 1 atgaaattac gtatttgtga acttgttatt aatgctaata aaattactaa atctaaaata 61 gaaaatattt tagaacttaa aaaaaaagct attcaaaatt atgcctatat tttacatgat 121 aaagatactt atcaaaatga aaaagaggct caattaaatg gtaaaaaaat aggagatcta 181 aaatcccctc attatcatat atatttaaga tttaattatg catatgatac caaacatatc 241 gctcaatggt ttaataccca agataatttt gtttctaaaa ttaaaggcag atttagtgat 301 gctttaatgt atatgactca tgctaatagt tctgataaac atcaatatga cgaaaaagcg 361 gtagttagtg attttgattg gaaatcagaa atacaaaaaa ctaatttgaa taaacaattt 421 aaaatgaatt atgctagatt aaaagaaatt aattctcaaa ttatatcagg agaaattaaa 481 gaatataata ttgatgaaag aattaatgta gatgagtatt atgtatattc tgcagcaata 541 gaaaaagcat ttaaatatag agttattact ttaaaaagga ttaaaagaca aatggaatgt 601 gtttttatta caggtcaaag tggatctggt aaatctactt tagccaaaaa aatagctaaa 661 gataataaat ataatgccta tatttcatct ggttctaatg atattttaga tgattatcga 721 ggagaagaat gtattatttt agatgaccta cgttctaatt gtctaggttt atcagattta 781 ttaaaaatgt tagataataa tactgcctcc agtgttaaga gtcgttataa aaataaagta 841 ttagaatgta aattaattat tattactact gttaaaagta ttgatgattt ctttgaagat 901 atttttagaa aagatgaaac tattattcaa ttaaaacgtc gttgtactta ttatattgaa 961 atagattcaa aatatattta ttatagttat tgggattcaa ttcaaaataa atatgattta 1021 ttaaataaag aacccaataa tttattaaat gaatttaaaa ttaaatcttt atcaaagcaa 1081 gaagcaagat tgaaatttaa aaaatcctta aaaataaatt tacctacaaa agataaagat 1141 gatatttaaa atatatttat aattaaatgc tttttctatt ctttttatgt gtattttact 1201 agcttttttg atataatata agtgtattca cacggacaaa aatacaaatt aataatagtt 1261 tagcattttt atatgttaaa ataattaatg actctatata tatgtgcgtc cgtgtgctta 1321 tatgtagggt catttttgtt atctaaatcc cacattaaaa tatataaaaa aaatagttat 1381 ataaatcccg aatctcccaa agacaaagat ttatataact accatgaaag gatgcattaa 1441 atgcaaaacc ttaatttaaa catagacgca tttattgata aaataaatta ctatgttatt 1501 tatattataa catttttaaa atatgttttt aacagtatta ttgcaatcaa aaacgttgat 1561 ttcagtttat tcaatatacc aaatagtata ggaataattt gtcattttct ttttgctatt 1621 ttttgcattt taatatttat caccttgtta gtttttttag gttctatatg gaatattatt 1681 aaaacaataa tcaaatggat tttatatccg tttaaattat tatttaaatt aattaaatgg 1741 attttctcac ctaaatcaga attaaaacaa ccaattaaaa ctaataactt gaatcaatat 1801 gatttaaaca aattacaaag aaagataaat gatttagaat acaaacttaa tttacaaaaa 1861 agacaaaatg taattaaacc atttgaaaac aaatatcaaa aaagaggtta aattatgaaa 1921 aacaataatc acaaaaaccc aaaaaataaa atatttatca tttggggttt atttattagt 1981 ggagttattc ttgttttttt aatacttctt ttattagcta ttaataaacc tcaacctaaa 2041 actgataccc aaaatcaaca acatttacaa tctaatatta atgccgaaca agaacaacaa 2101 acctataata gggttattaa taagatagaa tctgaaatag ataaattaac ccaacaacaa 2161 gaacaaactc cattacttaa atatcctcct aaaataagat attatgatga tggaataaag 2221 atcttttcca tagaaaaata taatcaagat acaggtaaat taattaaaga catttattat 2281 aaaaatgatg gagaaacaat agaatatact gttgattaca attctgatgg ttctatctta 2341 aacacttttt ataacccaga cggaactgtt agagacactt atcattctaa tgaataaaaa 2401 aagaaaaatt atattaaaga tttggattat atttatatca attcttattt taatcctgtt 2461 attcctttta ggtttaaaat tacctaaatt gcttaaatta aaacaacaac aagataataa 2521 tcaagttgaa acccaatata aatattaaac tcaatatatt catgatactg ataaagttaa 2581 taatataatt ggattaatta attctttaaa acgtttaaaa actttaaagc aattaaaacc 2641 tcaaactgaa aaacaaaaag aaactcaacc aataaataat ctagatttct ttgaccctaa 2701 ggttcaaaat gatctttatc ataaacttag taaagaatta gataaaatac ctcaaattaa 2761 atccacttct aaattacctg aagttaatca gcttccagat gaagctaaac aaactgaata 2821 taaatatgtt gtaccagatt ttaaagatga aaaacaagaa cttaaagata tagcagttat 2881 aactttaact actggtgcgg ttgtaattac ttgttctgtt ttaactccta ttttatcctc 2941 tgtaggtcca ataggaacta ttgcaagtaa attagtttca attgcttaat ttaaatagaa 3001 aggagaaata aaatgttaaa taaagttcaa ttaatcggta atatcaccca tgacttagag 3061 ccaacacata ttaatactaa tgagggtcaa atatctaaat tagatttcca aatagctgta 3121 aataataaag ataaaactca attcattcca tgtgttattt ttagaaacca agctgaaaat 3181 atgagtatgt atttacataa aggttcaaaa gtatatttag aaggaacgtt atcaattgaa 3241 aaatatacca ataacgaagg cgaaaataaa actgctacta aagtaatagt tcaaaaagtt 3301 atttttttag ataataaaga taaataaaat aaaggcccct attaaattag gggctttaaa 3361 aatataaaat ttcaattgcg cggaatgtta attttaatca atctattaat tttataataa 3421 cctttaaaca cattatttta tatctatatg acgtttcaaa tgacatttaa tatcttttat 3481 ctaacgcaca taaataaagg tctaagatat ctcgcttagc gagctaggcg tccagccgat 3541 gcatcttaat tatattatga taccccctct tataaagtcc ccttttgggg atttaggggt 3601 tttttattta ttaatatttg ttaaaataat tatgacctta tatatgaagt ttttcgaaga 3661 ttcctaatat ataaggtcat ttttatacct aaaccttata tatatatgta tgtagtaaga 3721 tatataaaat cctcagcatt tccctgccat agagggcttg tctctatggc aggtagtaat 3781 tgtagtataa attattttat tttattgaat ttttctaata ttttttaact tttatatact 3841 acttttttta atgttttaat gttgtatata tatgttataa taatatcgag cgccttaccc 3901 gtgaactatc gggtaaggag tagcgagaac gaaccaaccg cctttgccgt gagtatcggt 3961 aaaggagtag gttggggagt ctacatataa aaaaaaggaa tcttcgaaa //