>gi|56709230|ref|YP_164832.1| phytanoyl-CoA dioxygenase family protein [Ruegeria pomeroyi DSS-3]
MPHPLVTPEMIETFQRDGVVLIRGLFADHVETLRAGVAANMAAPGPYASDNRKEGHTGLFFDDYCNWERI
PEFREVIETSPAAEVAAELMQSKTVQMFHDHVLVKEPGTSMATPWHQDGPYYFVEGRQTVSFWSPLDAVS
EATLRCVAGSHRWEKEVLPTRWVSEEGFFADEGQYMPVPDPEAEGMRIVEFEMAPGDAVAFDYRTLHGAR
GNRSTARRRAFSLRLLGDDARYVERPGRTSPPYPGHDMVPGQRLREDWFPVLLKR
>gi|56708792|ref|YP_164833.1| hypothetical protein SPOA0001 [Ruegeria pomeroyi DSS-3]
MPDRQISKAGWTGMEYASFDHFLKTGGAALAKGPVAMIFVEDDVELATTMRHHIQCGFKSVLALMPDAFT
LPPDVESRVHRIPFDCGPRLAVTNAINRIIAAAPGIWMYYCFNAEYLFYPFCETRSIGEMLAFHGEERRD
AMLTYVIDLYADDLGAFPIGVSLDRAFLDKSGYYAQARKEPETGHPRERQLDFFGGVRWRYEEHIPKDSR
KIDRIALFRSAPGLHLQPDHTFDDQEYNTYACPWHHNLTAAICSFRTAKALKKNPGSTFEIQSFRWHNST
PFEWHSRQLLDLGLMEPGQWF
>gi|56708793|ref|YP_164834.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Ruegeria pomeroyi DSS-3]
MHCKRRPNPVEAAADPAKAKARPMSDPKKLFIKTYGCQMNVYDSERMAEALGGQGYVETQSAEDADMILL
NTCHIREKAAEKVYSELGRFKGLKAAKPDLKIGVAGCVAQAEGEEIMRRQPLVDLVVGPQSYHRLPELEA
KTRAGEKALDTDFPEEDKFEKLKGRPKAKRGPTAFLTVQEGCDKFCAFCVVPYTRGAEVSRPADRILREA
NELVERGVREITLLGQNVNAYHGAGPNGDMTLAGLIWELDKIDGLERIRFTTSHPNDMADDLIEAHGTCA
KLMPYLHLPVQAGSDKILKRMNRSHTAESYLRLIERIRAARPDIVMSGDFIVGFPEETEADFQDTLDLVE
QVRYGYAYSFKYSTRPGTPAAERAQVDPAEADDRLQRLQAVITRHQREIQDGMVGREVSVLFEKPGRQPG
QMVGKSEYLHAVHVQDPGLEAGQIARVRIVASGANSLAGELA
>gi|56708794|ref|YP_164835.1| hypothetical protein SPOA0003 [Ruegeria pomeroyi DSS-3]
MRLPHPASRQRDCRTIGNRCAQGSELHPFWLTIEGDHPPSEAASATLPDRLASSRRPLSGTGAPSSAVWR
WYIFLVRRGGIDMKAYLRAGAVLALTAVVATSPEAQQRPTKPGSDVHNITISCFRGPTSSVIWDRPNAVF
VEDLVRMGYTYPEAHAIGERICRDEWGVGQHDYMRSSLLQIVAKTPPSH
>gi|56708795|ref|YP_164836.1| OmpA family protein [Ruegeria pomeroyi DSS-3]
MAAALATVLALTGLTTAPATAQSTRTVIGERYVPTIWVDPDGCEHWVMDDGAEGFMTPHVRRDGTPVCRR
GALCGTMPADQFFATDSYRISSEGQARLRQFFQETGANGYIITGHTDSRASDAYNLRLSVNRANSVARVG
RATGARIVDVRGYGERDPRVPNTSAANMAQNRRVEIICVN
>gi|56708796|ref|YP_164837.1| putative lipoprotein [Ruegeria pomeroyi DSS-3]
MKLIKGIALLAALGGLAACEATDKTRDRGIDAKDLSQLKAGIWVDPTGCQHWIIDDGLEGYLSQRMDRNG
KPVCDDSLPKGVATGPFKKGSNIVDAI
>gi|56708797|ref|YP_164838.1| PhoH family protein [Ruegeria pomeroyi DSS-3]
MAISALTPPQDSSTPAELQLEFPDNRLLIDLCGEHDRHLVLIEQVLGVQIVRRGNLLSVLGEDGARDRAA
EVLEALYERLQSGRPVEGADVDRELRMGRGEEAKDTPAEDQLEMFLGGRIEIKTRKKPVEPRTDAQKAYV
KSLFENELAFGIGPAGTGKTYLAVAVGVSMFINGLVDRIVLSRPAVEAGEKLGYLPGDMKDKVDPYMQPL
YDALNDFLPGKQVAKLIEEKKIEIAPLAFMRGRTLANAFVVLDEAQNATTMQMKMFLTRLGEGSRMVITG
DRSQVDLPRGVTSGLSDAERLLKPVPGISFNYFTSKDVVRHPLVAAIIEAYEADTG
>gi|56708798|ref|YP_164839.1| hypothetical protein SPOA0007 [Ruegeria pomeroyi DSS-3]
MIRIAGFVAAVLTLVWALVHAFVGGAETATPLLHSALPEVARGTGWLVWQFMTGLLLVMSAMLAWGTRAR
NAALLWAASAQAAMLALLGIVLVPAIGMSYGLLPQGWLFLPVALLGVVAARGAAR
>gi|56708799|ref|YP_164840.1| hypothetical protein SPOA0008 [Ruegeria pomeroyi DSS-3]
MTLDLTLEDPRWTILPPLADRAISATLAQMGLDPELCEISLLGCDDARITALNAEFREKPSPTNVLSWPA
EDLAAETPGGTPLAPEPDFTGAVPLGDIAIAFDTCQREADAAGKPIADHVTHLIVHGLLHLLGYDHIRDE
DATLMEGLETRILGNLGIDDPYTME
>gi|56708800|ref|YP_164841.1| hemolysin, putative [Ruegeria pomeroyi DSS-3]
MGDIEGSSSAAQSAQPEETGETNADKTGFFTRIMDAFSSGESQQEPTLGGASAAPVPVPGILNLRRMRVE
DVAIPTAEIVSVPLTVSKEELVHVFRDSGMTRIPVYENTLDTPLGFVHLKDFALTHGFNGNSTQFDLRSM
LRPLLFVPPSMPIGVLLAKMQTERRHMALVIDEYGGVDGLLTIEDLIEQVVGEIEDEHDTDEAQTWVKER
PGCYIAQARTPLDEFETEIGRSLTNHEDVDEEEIDTLGGLVFMLSGRVPARGEVVPHPDGVEFEVIDADP
RRIKRLRVMIPDAAE
>gi|56708801|ref|YP_164842.1| apolipoprotein N-acyltransferase [Ruegeria pomeroyi DSS-3]
MSLLAGWYLWQRMMLALGLGAVAALGLAPMSLWLATIGALLALPALFLASPGWRQAAWTGWAFATGYFGH
ALAWIVEPFLVDVARHGWMAPFALVLMAGGLALFWAAAFALAAAPARGPERRVMLLVLTLSLAEMARGYV
FTGFPWAGLAQIWVETDAALLLAWTGPHGLALATLAAVLPPGVALARGLGGRALLLRCVPALALGLAILA
VDGARVPLEGSGKVVRLVQPNAPQHQKWDPDWYPLFLERQIRFTAAGTAPDLVVWPESALPYWLDDAGPV
LERIAAAARGTPVLLGANRAEGPRIYNALALIGAGGRIEATYDKHHLVPFGEYVPLGDLLEQFGISGFAT
RSGRGFSAGPGPVTLAIPGIGAALPLICYEAVFPRDARGTAERPRLLVQATNDAWFGTWAGPYQHLAQAR
MRAIEQGLPMVRVANTGVSAMIDPQGRITAALALGREGYLDVDLPPALAPTVYGRTGDLPLLVTLLVLLA
AAARIQGRNLLPNSD
>gi|56708802|ref|YP_164843.1| S-adenosylmethionine synthetase [Ruegeria pomeroyi DSS-3]
MSRQNYIFTSESVSEGHPDKVCDRISDAVLDAFLTEEPEARVACETFATTNRVVIGGEVGLSDQAKLREY
MGRIDQIARDCIKDIGYEQDKFHHETVEITNLLHEQSAHIAQGVNAAEGKDEGAGDQGIMFGYATTETPA
LMPAPIQYSHAILRRLAEVRKNGTEPALGPDAKSQLSVIYRDGMPVGVSSLVLSTQHLDPDLTSADIRAI
VEPYIREVLPEGWLSADTVWHVNPTGKFVIGGPDGDAGLTGRKIIVDTYGGAAPHGGGAFSGKDPTKVDR
SAAYAARYLAKNVVAAGLADKCTIQLSYAIGVSKPLSIYADTHGTGDIAPAAIEKAIDTVMDLTPRGIRT
HLGLNKPIYERTAAYGHFGREPEADGGFSWERTDLAEALKKAV
>gi|56708803|ref|YP_164844.1| DNA topology modulation kinase FlaR, putative [Ruegeria pomeroyi DSS-3]
MQRIMVIGGPGSGKSTLGRKLGARLGLPVVHMDPIYWLGDWVERDKAEAMRMAKEVADGSQWVFEGNHFA
SMAYRAERADLIVFLDMPRVLRMWRILWRSLRYYGRTRPDMGPNCPERFNRAFLKFCWTYDREGRLRALG
FVDDWRDRRRVRILTSRRQVAAFLVEIDRQ
>gi|56708804|ref|YP_164845.1| hypothetical protein SPOA0013 [Ruegeria pomeroyi DSS-3]
MRQFARYTLIAALTLGSALMAHAEEDDLVFRVDGETLVYDTTRGDEAGGTDDIEVAHVDRLLALLRQNPE
IRVLDLNSTGGSLYAGREMARIVLDFDLDTLVSGECFSSCVRIFLAGAGRRMLLGAKIGFHQTTWSPGSV
EEYYNANRDSDGWGTPFDFASWVYEDTQTEVHDDLIYMIDRGVDAEFAVRTKGVRADDSWYPSRLELTRA
GVLRERLRDAE
>gi|56708805|ref|YP_164846.1| tRNA (guanine-N(7)-)-methyltransferase [Ruegeria pomeroyi DSS-3]
MSKTTPDRPRRNFYGRIKGKTLKPNQRTYLDEDLTPLAPGPVSWQDNPTRQPLDLNALFGGRETWLEIGF
GGGEHLVHQAASNPGIGIIGAEPYINGVAMLLGKIRAAGGDNVRVHPGDVRDLFDVLPAQSISRAFLLYP
DPWPKKRHHRRRFVTPEHLEPLARVLKPGAIFRVATDIPDYVRQTLEEVPRAGFEWLAERPADWRQPWGD
WISTRYEQKALREGRVPHYLTFRRLEG
>gi|56708806|ref|YP_164847.1| 3-phosphoshikimate 1-carboxyvinyltransferase [Ruegeria pomeroyi DSS-3]
MSGHGTPIPMTSHPCGPLSGVAEVPGDKSISHRALILGAMAVGETRITGLLEGEDVLDTAKAMRAFGAEV
TRHADGSWSVHGVGVGGFAEPEQVIDCGNSGTGVRLIMGAMATSPISATFTGDASLNKRPMARVTDPLAL
FGAQAVGREGGRLPMTIVGAADPVPVRYEVPVPSAQVKSAVLLAGLNAPGQTVVIEKEATRDHSERMLAG
FGAEVTVEDTDEGRVITLTGRPELKPQVIAVPRDPSSAAFPVCAALITPGSDVLVPGIGLNPTRAGLFTT
LREMGADLTYENERTEGGEPVADLRARYSPDMKGITVPPERAASMIDEYPVLSVVAANAQGVTMMGGVKE
LRVKESDRIDAMARGLRANGVTVEEGDDWWAVHGLGIGKVPGGGTCESFLDHRIAMSFMVMGMGAQAPVS
VNDGSPIATSFPIFEPLMGGLGAKLERA
>gi|56708807|ref|YP_164848.1| cytidylate kinase [Ruegeria pomeroyi DSS-3]
MTFTVAIDGPAAAGKGTISKAVAAHFGFAHLDTGLLYRAVGRRTLEGEAAETAARDLRTEDLERDDLRTA
QVAQAASKVAVIAEVRAALVDFQRAFARRAGGAVLDGRDIGTVICPEAEVKLFVTASAEVRAERRYLELT
AKGQDTTRAAVLADVRERDARDADRATAPMKPAEDAVLLDTSTMDIPTALAAAIAEIERKMPAKG
>gi|56708808|ref|YP_164849.1| YHS domain-containing protein [Ruegeria pomeroyi DSS-3]
MKTFALTALIAALPMLAAPAFAADEVNVSNGISAGGAPLAAHGVDLVTLVRDGNPVEGFANYSATIDGAS
YYFTSEENLKEFQAEPARYLPQHGGFCSYGVAVGKKFDGDPDKYVLADGKLFLFLNAATRDKFLEDVAGT
TATADGNWAKIKHVAVGDL
>gi|56708809|ref|YP_164850.1| hypothetical protein SPOA0019 [Ruegeria pomeroyi DSS-3]
MLFALILLTLPALIIWLAARIPALDRIGVVPLTFATGFALALSLDLSAFTQIQTTLQEVSVALALPLILF
AANLRRALTEARGAGLAMALSLVSVCVASLLGVLLFQGRVENLPQVAGMAVGAYTGSGVNMGAIKSATGA
SDALFLTMVTYDIVFSIGYMLVIVLVGQRLAGLILPPFVPHSQGDHEANTSHIADDSARGYARLIQRSGL
AGSALAFGAAGLCVGVAVALSGLLPETWSGTATILLITTFGLLGAFVPRLHASTTSFHLGMYLILIFCLS
SATLLDLSVLSGMNWALGGYFAFILLGAMALHALLCRLFGIDRDTYLVASGAAIMSVPFIPVICGALRNR
ALLVPGIAIAILGYAVGNYLGVVVASLAAGM
>gi|56708810|ref|YP_164851.1| alanine racemase domain-containing protein [Ruegeria pomeroyi DSS-3]
MSEAYFQKLQAALIAAGRQLPTLVVDTERLAANMAAVRRMTAPSLALRVVEKSLPAPDLLRVVIAGLETN
RLMSFHLPFVQQAAAAFPEADILLGKPMPVGAVAGTSPTLDAQVHWLIDSPERLAEYAALAAQSDRALRI
CLEVDIGLHRGGFSLARAGEFAAALTRLRDDPNLHLTGLMGYEPHIARLPRLIASRARALDAARAAYARF
HALTVQTLGAGTAAKLIYNTGGSTTFMLYDGSGPETELALASALVKPTDFDLPALEALQPAAFIAAPVLK
TVERPEIPMAPGLSRVLRLMGRSPERACFIYGGNWLADPCHPAGARRSALFGHSSNQEMYDLPANSTLKP
GDFLFFRPRQSEALFLQFGDIAVFDGTAITDWWPVWHETH
>gi|56708812|ref|YP_164852.1| oxidoreductase, FAD-binding [Ruegeria pomeroyi DSS-3]
MTLTRRKLLGYGALAGLAVPAAMQAHWLSRDFTRPDYSPDIPPAPPGRQVWRNWSGYQVATPQQIYAAAS
EEELATRIAAWPGRIRPVGSGHSFSALVPSQDMILDTGRLSGLISVDAAAGMATFGAGTRLRQAAMLAAD
HGLGFANLPDIDVQTLAGSFSTATHGTGRGLQAMHGCITGFRLITADGTARDVTRDSNPDLFDAGRVSLG
TLGVITRYTLKLEPSYALNRRLFILPTDEAITRMHDLAAAHRNFEFYVLPNLGYAAVITHDLYEGEIAGR
VPSEDEDWIATLKDLRDILGWWPWLRRRAFGAYVALEVPADGVLEDTTDEYWKLLSTARATRMNEMEYHL
PEDRAQEAVRAVVAALESRKESFFPMEVRFTGQDDAWLSPFNDGTRVSVAVHKLASEPLDMLFGTVEPIM
RAYGGRPHWGKLHSLNAPDLVALYPDFDRFAALRARLDPAGKFLNPHTAALFGAGDV
>gi|56708811|ref|YP_164853.1| cytochrome c5 [Ruegeria pomeroyi DSS-3]
MRALILLISALVLAALWWWLSGADAPAEPEATDIARAETQRPTDPELAAIYERSCMACHALVEAQAPLTG
FVPAWAAREKERGAHGLLLSARNGFGNMPAMGLCLDCSDEQLAALIAFMSGEGQQ
>gi|56708813|ref|YP_164854.1| TetR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MVPTETDTPMHTRATPKQARARQRVADILDAASALLAERPPGDLNTSLIAERAGVPVSSIYRYFPTLRDL
LDELSARAAGDLRQHFIETIAATEGEPDLVLRIRRTLEGIRVFMAEHPYYRGLLLLLASLRGVQSVEDDD
NAELVGFLADRWARGLDGFTGGDPQVVATTAVQIALTLEDRMARQTSPALEAQYHEEMVRALDAYLSLYL
RRDTEEES
>gi|56708814|ref|YP_164855.1| 2-oxo-hepta-3-ene-1,7-dioic acid hydratase, putative [Ruegeria pomeroyi DSS-3]
MTPEQHADAAARLIKAEETGRQIGLLSLAYPGMDMDDAYAIQQALAAHKQTAGRHVIGWKIGLTSKAMQY
ALNIDIPDSGILFDDMAFDDGATVPKGRFIQPRVEAEIAFVMKEPLGGAYVTRADVLAATDYVAPSLEIL
DTRILRVDPETGHARNVCDTISDNAANAGVVLGKQRHAPDAFDLRWVGALTFRNGEIEETGLGAGVLNDP
VESVVWLARRMAQYGQVIEPGHIVLSGSFIRPVECPPGTRIEADFGPFGAVSVHFA
>gi|56708815|ref|YP_164856.1| fumarylacetoacetate hydrolase family protein [Ruegeria pomeroyi DSS-3]
MKFATIAAERQELYGIIRDEGFVALSPDFPRWPDLRAVIAAGGLHDLAKAAMGRAVTHSDFTYLPPVPNP
GKIICVGVNFPDRNAEYKDGSAAPKYMSLFPRFASSFVGHGQPLIRPPENHTLDYEGEMAVVIGKGGRRI
RAEDAYDHIAGLSVCNEGTIRDWVRHAKFNVTQGKNWDRSGAIGPWMVPFTHPAQIDAARITTRVNGELR
QDDALANMIFSVREEIAYISTFTTLNPGDIIVTGTPTGAGARFDPPRYLKPGDVVEVEVTGVGTLVNGVE
DEV
>gi|56708816|ref|YP_164857.1| 3,4-dihydroxyphenylacetate 2,3-dioxygenase [Ruegeria pomeroyi DSS-3]
MGEIVLAAKCTHVPTMLMSEQEGPVKGKRQAAIDGHLEIARRARALGADTVVICDTHWVINAGFHINANS
RFQGLFTSNEFPQFIQNMPYDYEGNPGLGDAIAKEASARGAYTLAHHLDSLELEYGTLVPMRFMSREHKM
KVVSVAAWCTVHDHDESRIVGEAIRAAVEASNSKVLLVASGSLSHKIWPNKDYAANNGTFTISSEFNRQM
DLHVLEMWKRGDHATFLKMLGDYARFCCGEGSMHDTAMLYGALGWDSYDKPCEVVTEYFPSSGTGQTNVI
FPV
>gi|56708817|ref|YP_164858.1| 5-carboxy-2-hydroxymuconate semialdehyde dehydrogenase [Ruegeria pomeroyi DSS-3]
MPDLSTRLADLDRHLQRFRRDGVMNRIGGQDVPGGAGRFDSISPVDRSVICSVARGDAADMDAAARAAHA
AFPAWRDMPATERRAILIRIAEGIEARAEEIALCECWDTGQAWRFMSKAALRGAENFRYFADQVVQARDG
QHLKSPTLMNITTRVPIGPVGVITPWNTPFMLSTWKIAPALAAGCTVVHKPAELSPLSARLLIEIAEEAG
LPPGVLNLVNGFGEDAGKALTEHPLIKAVAFVGESRTGSLIVKQGADTLKRVHLELGGKNPVIVFDDADT
ERALDAVIFMIYSINGERCTSSSRLLVQDTIREEFEARLVERVNNIKVGHPLDPTTEIGPLIGEEHFAKV
TSYFDIARQDGATVAAGGEVVGDQGYFVRPTLFTGANNRMRIAREEIFGPVLTAIPFSTEEEALQIANDT
PYGLTGYLWTNDLTRALRFTDKLEAGMIWVNSENVRHLPTPFGGVKASGIGRDGGDWSFEFYMEQKHIGF
ATGQHKIQRLGA
>gi|56708818|ref|YP_164859.1| Na(+)-translocating NADH-quinone reductase subunit A [Ruegeria pomeroyi DSS-3]
MQNFRLKKGLDLPVKGAPVQTIHPGPAIGSVAVLGADYLGLKPRMLVQEGDEVRRGTPLLCHKDAPEAMM
VAPVTGRVAAINRGARRVLQSVVIEVTDAADPGLDFATTGNGKTREGLTEKLCAAGLWTAFRTRPYSKMP
VPGDTPNAIFVTAMDSEPLAADAATIIADAGSAFASGLAAVALLSDGPTWLCHKPGDAIPGGDVAGVSVA
TFDGPHPAGLAGTHIHFLAPLTSDKSVWTIGYQDVIAIGRLLETGHLDPSMVIALSGPAAREPRLIRTIM
GASTGDLTTAEISVDAPVRVISGSILSGRQAEGPFAYLGRFARQVTLIEEDRKQHTLGWILPMPSKFAVQ
PVLGSAFSRKLYALTSNLNGGRRAMVPTGTFEELMPQDYLPTQLLRALLVMDTDTAQALGALELDEEDLG
LVGFACPAKYEYGLALRDSLSKIEKEG
>gi|56708819|ref|YP_164860.1| Na(+)-translocating NADH-quinone reductase subunit B [Ruegeria pomeroyi DSS-3]
MGLRNFFDRIEPNFTKGGKYEKLFPIYEMVESFIYTPKTVTTAAPHARSYVDMKRIMTYVVIATIPAILW
GMWNTGYQANSAIAMLGADAATGWRIAILQALGISLDAANPLANVAHGFLYFLPIYLTTLIVGGIWEVVF
ATVRGHEVNEGFLVTSMLYTLIMPASAPLWQVALGISFGVVIGKEVFGGTGKNFLNPALVGRAFLYFAYP
ANMSGDSVWTPVDGFSGATALAVSAADGYQQLATNGITWMDAFYGTIQGSFGETSTLACLIGLAFLLMTK
IANWRLIVGSMAGMIGFSLLLNVIGSDSNPMFAMPWYWHLVLGGYAFGLAFMVTEPVSASHTNTGRYIYG
ALIGVMVVLIRVINPAFPEGMMLAILFGNVFAPLIDYFVVQANIKRRARRHV
>gi|56708820|ref|YP_164861.1| Na(+)-translocating NADH-quinone reductase subunit C [Ruegeria pomeroyi DSS-3]
MSETQSKGLIARFLAAPPDSVGKTIFVAVAVCLVASMIVSSAAVALRPVQEVNKLKDKQMNILQVAGLFE
PGQNVAEAFKAFEPQVLELTTGRFTDQFDAATFDDKAAANDADLSRALDDDPAGIGRQALYRTVYLLRDE
AGGIDKVILPIHGYGLWSTLYGFIAVEENGNDIFGLQFYQHGETPGLGAEVDNPRWKAMWNGKKLRDDAG
DLQITVAKSQPAAGADFYVDALAGATLTSVGVDNLVRFWMGEQGYAPFLEALKAGEI
>gi|56708821|ref|YP_164862.1| Na(+)-translocating NADH-quinone reductase subunit D [Ruegeria pomeroyi DSS-3]
MSQTKKELLIDPLVDNNPITLQVLGICSALAVTSSLQVAFVMALAVTFVTAFSSFFISILRNQIPSSIRI
IVQMVIIASLVILVDQILKAYAFEISKTLSVFVGLIITNCIVMGRAEAFAMKNPPVASFIDGFGNGLGYG
LILMLVGVIRELFGSGSLFGVTILQTVNNGGWYVPNGLLLLPPSAFFVIGLLIWAFRTWKPKQIEEREFK
IQSVEAH
>gi|56708822|ref|YP_164863.1| Na(+)-translocating NADH-quinone reductase subunit E [Ruegeria pomeroyi DSS-3]
MEGLISLAVKAVFVENLALSFFLGMCTFIAVSKKISTALGLGISVMVVQAITVPANNLLLNTLLKPGALA
WAGFPDVDLTFLGLISYIGVIAAMVQILEMILDKYFPPLYNALGIFLPLITVNCAILGGSLFMVERDYNF
AEATTYGLSSGFGWALAITAMAGVREKLKYSDVPDGLQGLGITFITAGLMAMAFMSFSGVKL
>gi|56708823|ref|YP_164864.1| Na(+)-translocating NADH-quinone reductase subunit F [Ruegeria pomeroyi DSS-3]
METFSLGVVLFTLIVIALVGVILMARSRLVSTGNVNITINGEKTISVPAGGKLLQTLAAEKLFVPSACGG
GGTCAQCRVKIHSGGGSILPTEESHITKREAACGDRLSCQVAVKQDMDIEVPEEVFGVKKWRCKVRSNDN
VATFIKALVLELPEGENVNFRAGGYIQIEAPAHQLAYTDFDVQDEYREDWDRFNLWQYKSVVNEPVERAY
SMANYPEEKGIIMLNVRVASPPPGSSDIPAGKMSSYIFNLKPGDEVTISGPFGEFFARDTDKEMVFIGGG
AGMAPMRSHIFDQLKRLKSKRKISFWYGARSKKEMFFVEDFDMLAAENPNFEWHVALSDAQPEDDWKGYT
GFIHNVLFEEYLKNHPAPEDCEFYMCGPPIMNQSVINMLLELGVDREDIMLDDFGG
>gi|56708824|ref|YP_164865.1| CBS domain-containing protein [Ruegeria pomeroyi DSS-3]
MAPSSYQAPTRGDKAEKTTYSQSASSNLAQSQSTVADLLGGKGEAVFSVRPGDTIGQVVGVLKDKRIGAV
LVTDQNGALLGILSERDIVRRMADTPGQTLPQQAEGLMTRAVQTCAPDETLNVVLKRMTEGRFRHLPVMR
DGKLCGMITIGDVVNFRLRELEYEALKMKQMIVG
>gi|56708825|ref|YP_164866.1| hypothetical protein SPOA0035 [Ruegeria pomeroyi DSS-3]
MTGPGSNWPTGYRSSSRPCRHVSGPDMRMGPWAGSPACLLRLTPILPGHPDPQRANRPQPGQNRSPPMFD
TLYLTPASAALIFFMVVVCGHGYRKSWKAEPPAPRWHLWAYGLPAAIGLLTLAFLPLKG
>gi|56708826|ref|YP_164867.1| thiamin biosynthesis lipoprotein ApbE [Ruegeria pomeroyi DSS-3]
MTPPRRWPMPQQRNIRGWPMVRWLALPVALMLSGCLFEAEPEVVKLSGDTMGTTYHITAIGADLDAEALG
AAVEVTLAAVNAKMSNWDPKSEVSTFSARTDTAPMPVSPEFVTVIGAANQVHAQSGGKFDITLGPLIELW
GFGPRKPEDPIPSDAEIASALQGVGQARLLTLDTAGGTLAKARPETGINLSAIAKGYGVDAVAETLRGFE
IDDYMVEIGGDLVTRGKNDKGEAWRIGIERPDRGAQTVQLVVPISDYGMATSGDYRNYFEHQGQRYSHIL
DPVTGRPVTHRTTSVTVIADSAMMADAWATAMLVLGLDQGLKVAEAHKLAVFFIERDAQDGAEAYMTAQS
SAFADLLNAAD
>gi|56708827|ref|YP_164868.1| hypothetical protein SPOA0037 [Ruegeria pomeroyi DSS-3]
MTTFLLAFFLLMIVMLGMSLGVMLMGKRIKGSCGGLNAISGADRCVVCSKEIDPDSPLRDRLQCPRARKM
AERLQDAD
>gi|56708828|ref|YP_164869.1| LuxR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MAPTDQHDQLVLSIYDAALDPGKWPELLTRIARYAGGIGAMIFEVETPGDQPHLLASHFSDTYQIDLVEG
YLNQHNDLEIADQAVFARHSRATDDIQLIPDSVLAASEAELLARPNQKTMMQYGIRYRCGALLNKDQLFH
DRFSMQFGSDASDDLPQRLARASRLLPHIAKALSIGRPIQAVQKRHQTVLNALDKLDVGFCVLDERMNVI
AGNEEFRRQSEESGVFRRDPQGKLSFRSDDDLSRARTLLGDPQQHGRFGARPRKEALEADHQSDARIGDA
LCIDISPLHKAREIGEQALDGFLLMSTDTSRTYRLEMPTIAALFDLSEAECAVFELMAEGKTNKQIAEER
GRSLDTINSQVKSILSKSNCDNRTQAIRMATNISSGFLVRD
>gi|56708829|ref|YP_164870.1| hypothetical protein SPOA0039 [Ruegeria pomeroyi DSS-3]
MISKHVIGMALACGLVALAAPEAQAQSGWSVCRDVECLDQGWNDAQRRWWYTTTQGSRLLPLSWMRALEQ
PGDGDGAIRAFLDRAYMDELGYIANPDPVHNPEGLPLGWVVDQDKTLSADLMCDTFPETCDALTMREPWV
GLTCSACHTNEITHQGRRLRVEGAPTLADFQRMEEDLLQALKDTVADRDRFDRFARGVLGADQSIDGRES
LELQLNEQIVWQQALADKNAAPKVRYGHARLDAQGHILNKVALTIRHPNQITNVLADAPASYPHIWNTSQ
QDQLQWNGIAPRMARIRLLGENTELGALVRNTSEVIGVFAHLETDKSKVLRGYPSSARVRELVSLERQLE
SLQSPRWPEDMLGAIDWDLAAQGREVFTRKIDGESCADCHSHMAPGDTSSKMEISMTPLTELGTDVFTTC
NTFLHRSKSGNFGGQLVDTKFTRIDRDEDYTRLMLVNATVGTIRGKLFEVLAAILGKDDRPSGIRTESSL
VTEYLPGVSDAKKKADAEECLTQEHPLLAYKARSLNGIWATAPYLHNGSVPTLYDLLLPARMRNVATALD
AELPEDAATRPEVFGVGSREFDPVKVGFVSELDQNPFTFRARGEDGEPIPGNFNAGHDYGTAGLSEEDRR
ALVEYLKTL
>gi|56708830|ref|YP_164871.1| crcB family protein [Ruegeria pomeroyi DSS-3]
MSSRITHDLPLATLVVNVLGTLLLGFWLGQPETGGPDIEHGRRLILGFCGGFTTFSSFAYQTLDLHRTRS
IATAAGNILASVTLCALAFLMGTYLSG
>gi|56708831|ref|YP_164872.1| crcB family protein [Ruegeria pomeroyi DSS-3]
MRQKAGSYLAVFAGGAIGSVLRELLGFQLPGLSFLTATFGINIAACFLLGWLYAIRHRLHPHLLHLGAVG
FCGGLSTFSSFVLELDQLTRMDGWSIGLTAMTLEIAAGLAAAILGEALGRGREARR
>gi|56708832|ref|YP_164873.1| hypothetical protein SPOA0042 [Ruegeria pomeroyi DSS-3]
MDTPANKPCIICVAITGSVPTKADNPAVPITVSEQVESTQEAFEAGAAIAHCHVRNDDGTPSSDPDRFAR
LTEGLHTHCPGMIVQFSTGGRSGAGQARGGMLPLKPDMASLSVGSNNFPSRVYENPPDLVDWLAAQMRSY
RVTPEIEAFDLSHILRAIDMHGRGLLYGKLYVQFVMGVKNAMPADREVFDFYVRMMRTRAPQAEWCAAGI
GANQLTVNEWAIAAGGHTRTGLEDNIRLDRQTLAPSNAALVRRSVELCDKYQRPVASWQQAREILGLPAA
ARN
>gi|56708833|ref|YP_164874.1| protocatechuate 3,4-dioxygenase alpha subunit [Ruegeria pomeroyi DSS-3]
MVQKLDYLKETPSQTAGPYVHIGLAPGAAGFDIYERELGWDIAGPNAAGARIRVEGRVIDGTGSPVKDVL
IEVWQANAAGIHAHPEDPGQVEEGFRGWGRVITDFETGDWGFDTVKPGPVPGRNGAMQAPHLTLWIVARG
INIGLNTRLYFSDEAEANAADPVLNLIEWENRRATLIANRDERDGKPLYRFDIHLQGPQETVFFDI
>gi|56708834|ref|YP_164875.1| protocatechuate 3,4-dioxygenase beta subunit [Ruegeria pomeroyi DSS-3]
MPKPGEFYQRDRAWHPPAHVHDYKTSVARSPRQALISLENTVSEITGPVFGHGDIGAGDNDLIHNYAQAG
HSALGERILLHGRIFDENSRPLPHTLVEIWQANAGGRYRHKKDTYLAPIDPNFGGCGRTLTDENGYYYFR
TVKPGAYPWRNWVNSWRPAHIHMSIFGTAFAQRLITQLYFEGDPLIHACPIVNTIPDPAAIDRLIAPLDM
NAAIPFDCLAYRFDVVLRGRRSTLFENRLEGN
>gi|56708835|ref|YP_164876.1| 4-carboxymuconolactone decarboxylase [Ruegeria pomeroyi DSS-3]
MSERYDNGMKVRRRVLGDAYVDRAEAGKTAFEAPFQTLITEGAWGTVWASDGISDRERSMLTLALLAALG
NFDEIPMHIRATARTGASKQDVLEAFQHVAIYAGVPRANQALKLARQTYDEMEAD
>gi|56708836|ref|YP_164877.1| 4-hydroxybenzoate 3-monooxygenase [Ruegeria pomeroyi DSS-3]
MRTQVVIVGGGPSGLLLGQLLHRKGIDTVVLERQSRAHVLGRIRAGVLEVGFVNLMREAGVAERMDREGF
VHHGTILAHGEEQIRISFEELIGRHVVVYGQTEVTHDLYEARDRVGGKSVFNAEGVTIHDADSDAPYVTY
TANGTEHRIDCDYVAGCDGFHGVSRQTIPTGIRKEFEQVYPFGWLGLLSETPPVSDEVLYSLSDRGFALC
SMRNATLSRYYIQCALSDKVADWSDDAFWAEFRQRLPRAVAERLVTGPSIEKSIAPLRSFVCEPMRWGRL
FLCGDAAHIVPPTGAKGLNTAASDIHYLYHALVQVFESGETEGIERYSEQALARIWKTQRFSWWMTKLLH
RFPEQSEFDLRIQRAELEFLRDSRDAQTVLAQNYVGLPY
>gi|56708837|ref|YP_164878.1| pca operon transcriptional activator PcaQ [Ruegeria pomeroyi DSS-3]
MIDRRIKFRHIQCFVEIAREGSLKTAAAKLFLTQPAMSKTLKELEEITGTTLMRRSRAGVELTKPGEVFL
HFARMSLASLQQGLDGIETEGRRQRETLSVGALPSVAAYLMPGAVSEFSRLAPHALLRIQDGPHGYLIER
LRLGALDLVIGRMGPPETMQGLSFTQLYQEQVVFVVRPGHPLLAAPDLARVADWPVIYPPPGAAIRPLVE
QMLIANGIGEFPNRLETVSGAFGRVHARRSDAVWIISRGVVANEIAEGRLVALPFGTELTRGPVGLMTRP
DRPESAVAQLFALALRNVIGAGAGA
>gi|56708838|ref|YP_164879.1| hypothetical protein SPOA0048 [Ruegeria pomeroyi DSS-3]
MPRQPNRPEPIRCALRRVAGVLGALLLVLQLLVPHLAQADEGAWIEICAEGGATWIQMPAEETGDPCPDC
GDCLLCSTAMDVLTPAYGAAVEPVILIARQLTGTDVSVAAARHRLWPETRGPPFQDKRGAMC
>gi|56708839|ref|YP_164880.1| nitrous-oxide reductase transcriptional activator NosR [Ruegeria pomeroyi DSS-3]
MLITRVIRVLLTLLFLAPLPALASDLPRFLAALAPADLAPGADGFGPLREDVPVAPVLKGGETVAWAFLT
SDFVGTTGYSGKPIHVIAAIDADAVLTGVKLVEHSEPIVLIGIPNSKMVALTEGYKGLDLKREAETGGEG
HDLDIISGATVTIMVIDDSLVRAGLKVARALGLGGLSPATPEGPRREIDMGQTGTSDWFTLSGDGSVRRM
TLDIGQINAAFDATGDERAKRRRERGAPEDTFIDMHLALVSVPEIGRTLLGEAEYANLVNWLEPGEQAIL
VLGRGAYSFKGSGYVRGGIFDRIQLIQGDSAVRFFDRQQRRLGTVAATDAPGFTELDLFKIPADAEFDPA
APFRLQLLVQRAVGAVEKSFLTFDLGYRLPERFLLPAAAPAVVEDASDEAAAKAALWQRIWKDRTVEIGV
LSAMLLLLTATFFFQFQATMNARVFYWFRFAYLSATLFFIGWYANAQLSVVNLMALAGSLRTGFSWDAFL
LDPLVFIQWFAVAAALIFWGRGAYCGWLCPFGALQELTNKLARALRLPQWTLPWGLNERLWPVKYMIFLG
LFGLSFVSIPLAETYAEVEPFKTAIILKFMRDWPFVVFALLLLLIGLFIERFYCRYLCPLGAALAIPARI
RMFDWLRRYKDCGNPCQTCANECPVQAIHPTGEINPNECITCLHCQVLYQSEAKCPVVIRQIKRRARTGT
VDPKLTLGHPPANHPNAKPQEAS
>gi|56708840|ref|YP_164881.1| nitrous-oxide reductase [Ruegeria pomeroyi DSS-3]
MSDHDNNLSVTRRGLLGATATGAVLASTGLGATLMTAREASAAAKVNLEPGELDEYYGFWSSGQTGELRI
LGIPSMRELMRVPVFNRCSATGWGQTNESLKVLTEGLLPETKQFLASNGKKTYDNGDLHHPHMSFTDGTY
DGRYLFMNDKANTRVARVRCDVMKCDKIIEIPNAHDIHGLRPQKYPRTGYVFANGEHEAPLVNDGQILDD
PSQYVNIFTAIDGDSMEIAWQVIVSGNLDNTDCDYQGKYAFSTSYNSEMGMNLAEMTENELDHVVVFNLK
EIEAGIAAGDYQELNGVKVVDGRKGAGNNYTRYIPIPNSPHGVNAAPDKRHIMINGKLSPTVSVIDVEKV
DALFADNADPRSAIVAEPQLGLGPLHTAFDNKGNAYTTLFLDSQVVKWNIAKAIEAYAGADVDPILDKVD
VQYQPGHNSTSMGETAEADGKWLISMNKFSKDRFLNVGPLKPENEQLIDISGDKMKVVHDGPTFAEPHDS
IIVHRSKVNPVNVWDRNDPMWEDARQQAAADGVDLEEGAEEPIRDGNKVRVYMTSVAPTFSLEKFTVKQG
DEVTIYVTNLDDVDDVTHGLCMANFGIAMEVAPQATASVTFIADRPGVHWFYCQWFCHALHMEMRGRMFV
EPRGA
>gi|56708841|ref|YP_164882.1| nitrous oxide maturation protein NosD [Ruegeria pomeroyi DSS-3]
MRWPLLIATLIASPLWAADWDVPNRAGAISETLAQAADGDTLRLAPGIYAETLVLSRPVTLDGMGRATID
GQGTGSVITVTGPGVTLRGLTVIGSGSDHDGIDSGIQLTKTARAPVVENNVLIGNLYGVDIHGAKDALVK
GNRIEGRQDRRMNARGNGVYVWNAPGAVVEGNDIQYGRDGIFVNSSRRNLFRDNLFRDLRFAVHYMYADN
SEVSGNVSIGNDLGYAVMFTSRVKVVDNVSIGDREHGVMLNYANDSVISGNVVKGAKEKCTFLYNANKNE
FTNNWFEGCGIGIHFTAGSERNRIVGNAFVGNRTQVKYVSTRWVEWSEDGRGNYWSDFAAYDVNGDGIAD
APYRPNDSMDHVLWTQPAAKLLLGSPAVQLLRWSQSAFPALLPGGVIDSNALIKAPEPSALKKVPHDG
>gi|56708842|ref|YP_164883.1| ABC transporter, ATP-binding protein NosF [Ruegeria pomeroyi DSS-3]
MTDKALTIETLCKDRGPTRVLSDVSLHVAPGERVALLGHNGAGKSTLIKSILGLTRIDGGSIRIGTAAPG
SAQARRETAYLPEAVSFHPALTGREQLRLFARLSGERADVSGLLERVGLADAMDRRIGAYSKGMRQRLGL
AQVLLGKPRVALLDEPTSGLDPISRQDLYAIIDELAGQGAAVLIASHALTEVEARTDRIAILRKGVKVAD
DTLANLSALAGLPIRLRVRARENADALAARLGGSRVNGASVELLCDPADKMTALRSIAAMGEAVVDVDMT
PPRLEDLYRHYAKETLQ
>gi|56708843|ref|YP_164884.1| nitrous oxide maturation protein NosY [Ruegeria pomeroyi DSS-3]
MTRFLAVAQTEMLILRRNRWLLVATLIMVLFALALTFAGSAPTGTLGVDMLTVSVASMTTLSVYLAPLLA
LMISFDAVAGDMDRGSLPLLLSYPAGRGEILLGKFAAHLAALAFAMTVGFGTAGAVAAWFGGAGPESLMA
LLRLILTSILLGAAFLALGYLLSATARGSAAAAGLSAGLWLVFVVLYDLGLLGAVVMDKGGTFTQSVFPW
VMVANPADAFRLWNIAATEGVAMASGMTGAAQALPVWAAPASLLIWPVLGLLLARAAFRRVEP
>gi|56708844|ref|YP_164885.1| nitrous oxide reductase accessory protein [Ruegeria pomeroyi DSS-3]
MRTLALIALIALAACKEEEAAAPPVPVDLTESALSYFCQMNVAEHGGPKGQIHLKGHPAPLFFAQVRDMV
AYLKSPEREAEITAVYVSDMGAARSWAEPGPGNWIAADSALFVTGADVAGGMGAPELVPFATPEAAARFI
ARHGGQALPLNDIPDAAVLGPVDLTQPLATPVL
>gi|56708845|ref|YP_164886.1| cytochrome c family protein [Ruegeria pomeroyi DSS-3]
MFKNRLILTILAAGLALPALADGDADKGKKVFNKCKACHAVGEGAANKVGPQLNGIIGAAAGQVEGFKYS
DALIEAAAGGLVWDDESLAAFLAKPKDFMKGTKMSFAGLKKEDEIENVIAYLQGF
>gi|56708846|ref|YP_164887.1| DNA-binding protein, putative [Ruegeria pomeroyi DSS-3]
MEPVQAEDEGLSPEALEAPDGETLGKMIRDARKDKGLTLEEAARSAAIGRSTLSKIENNQTRPSFDIIRR
LMQALDLETPQLFVQSGKSDISGRRDFTRKDQGEHQVTGTYDHELLCTELTSKRMLPYISTIKARDVSEF
DTWVRHRGEEFMFVLSGELTLYTEHYRPLPMKAGDSVYYDSGMGHGCVSTSDEDARVLWVSLEG
>gi|56708847|ref|YP_164888.1| glycine cleavage system T protein [Ruegeria pomeroyi DSS-3]
MTDTPKRTPLYDLHVELGGKMVDFAGWEMPVQYPMGIMGEHKQCREKAALFDVSHMGQVILRGDDIGAKL
EKLCPQVFLTLPEGKARYGFFTNAEGGIMDDLIVSNAGEYFFVVVNAALRHQDIPHLAAHLDGVEVTEIF
DRALVAVQGPSAEDVVGRLCPAARDLKFMETMLGEIDGVDCRISRLGYTGEDGYEISIPEGEAIRISRLF
LAHEDCEPAGLGARDSLRLEAGLCLYGNDIDNGTSPIEASLLWAIQKRRREEGGFPGAGRILKEIAEGAP
RKLVGIKPEGRAPARQHVEIQSLGGETIGEITSGGFGPTVGAPVAMGYVASAHAAPGEKVNLIIRGKAQP
AEIVALPFVAQNYKR
>gi|56708848|ref|YP_164889.1| glycine cleavage system protein H [Ruegeria pomeroyi DSS-3]
MSTRFLQNLAPACGNRNILSEGSTNMTIYYSEDHEWLSVEGEIATLGITKHAADQLGEVVFIEQKEAGDA
FAQGDEIGVIESVKAASEIYAPVDGEVVEVNEELADNPGALNDSPEGDAWIYKIKLSDPAQLDGLMDLAA
YTDMIG
>gi|56708849|ref|YP_164890.1| glycine dehydrogenase [Ruegeria pomeroyi DSS-3]
MAFKLTDYEAYDFANRRHIGPSPREMADMLQVIGFKTLDQLIDATVPPSIRQKEALDWGPAMTERDALYH
MKQVASKNKVLTSLIGQGYYGTTTPAPILRNILENPAWYTAYTPYQPEISQGRLEALLNFQTMVSDLTGL
DVANASLLDEATAAAEAMAMAKRSSRSKANNAAFFVDKNCHPQTVAVIRTRAEPLGVDVQVGDPSELEAG
AVFGAIFQYPGTYGHVRDYTAEIAALHEHNAIAIVAADILSLALLKSPGEMGADIAIGSTQRFGVPMGYG
GPHAAYMATTDKLKRAMPGRIIGVSIDARGNKAYRLALQTREQHIRREKANSNVCTAQALLAVMASMYAV
YHGPDGIKAIAQSVHRKTSRLAAGLEEHGFKVAPEVFFDTITVDVGPLQKTVIEAAVARGVNLRKVGSDR
IGISLDEQTRSETIEAVWGAFGIDKKDDSVKNRAYRLPDYALRETPYLTHPIFHKNRAEAEMTRYMRRLA
DRDLALDRAMIPLGSCTMKLNATIEMIPVTWPEFANLHPFVPEDQAQGYLEMIDDLSEKLCQITGYDAIS
MQPNSGAQGEYAGLMTIRNYHAAQGQGHRNICLIPTSAHGTNPATAQMVGYQVVPVRSDDHGNIDLADFR
AKAEQHSANLAACMITYPSTHGVFEETVREVCDITHEHGGQVYIDGANMNAMVGLAQPGEIGGDVSHLNL
HKTFCIPHGGGGPGMGPIGVKAHLAEHLPGHPEYGTAVGPVSAAPFGSPSILPVSWAYVLLMGGAGLTQA
TKVAILNANYIAARLKDAYPILYTSATGRVAHECILDTRPLNDEGGVSVDDVAKRLIDSGFHAPTMSWPV
AGTLMVEPTESEPKDELDRFCEAMLSIRAEAQQIIDGKIDPENNPLKHAPHTVRDLVGDWDRPYSREQAC
FPPGNLGVDKYWPVVNRVDNAYGDRHLVCTCPPMDAYEEAAE
>gi|56708850|ref|YP_164891.1| AraC family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MLADLFRTANEILGAHAYRVSVHRLAAQPCADPRRWTRRTVILLGDIRTRWSVADPLLPVLRVLLAQAPR
RVLVGGAVFLLRDAGLARNCALAIHSNFCAAAAEEGLEGLPDAPLFHSDGPVSSAVSGFAAVPLMLDLIA
EDHGQVSADALRAYLGLPAPQSQPRSRLSLGLLQRARGDRLIERTLTLMQEHIEEPLRIGDLAGMLGVST
RKLQRQFLDLTGEGPLAAYRALRIERAQQLLEQTNLPLTEIIAATGFGTHSNLARWMRKETGASPHILRQ
RALSGRAA
>gi|56708851|ref|YP_164892.1| catalase/peroxidase HPI [Ruegeria pomeroyi DSS-3]
MDGNDAPNAGQCPVMHGHAAGTGMRNHHWWPNQINLKVLHQHSSKSDPMGAQFNYAEAFKSLDLDALKAD
LTALMTDSQDWWPADYGHYGPLFIRMTWHAAGTYRTADGRGGGSTGNQRFAPLNSWPDNGNLDKARRLLW
PIKKKYGDKISWADLLILTGNVALESMGFKTFGFAGGRPDIWEPEEDIYWGSEGEWLAPSDTANSRYSGA
RDLENPLAAVQMGLIYVNPEGPDGNPDIVASGHDVIETFGRMAMDEAETVALVAGGHTFGKAHGNGPASA
VGPEPEAAPIEAMGLGWLSTHGSGKGADAITSGIEGAWKPHPTTWDMGYFKVLFKYDWELTKSPAGANIW
LATNVEDEDMVEDAFDPSKKHRPMMTTADLSLRYHPKLLPHAKRFAEDPAAFADAFARAWFKLTHRDMGP
RARYLGKEVPAEELIWQDPIPAGTQIDADDAAALKAQILASGLSVSDMVSTAWASASTFRGSDMRGGANG
ARIRLAPQKDWEVNEPAKLARVLGVLEGIQAGFSSGGKSVSMADLIVLAGCAGVEQAAKAGGHQIEVPFT
SGRGDASAEQTDAESFAVMEPVMDGFRNYQARELSTSPEEMLVDRAQLLGLSAPEMTVLVAGLRVLGANH
GGSAHGVLTNRPGVLSSDFLTNLLDMGTEWKPSGKGVYEGRDRASGAARWTATRVDLVFGSNSQLRALAE
RYAQDDAEASFVADFVAAWVKVMNADRFDLT
>gi|56708852|ref|YP_164893.1| aspartate racemase [Ruegeria pomeroyi DSS-3]
MTRRVVGILGGMGPEATILLQQRLLATVRAADDADHLPLLIDMNPQVPSRIAHLIQGTGTDPGPTLAQMA
RGLEQAGATALGMPCNTAHHYAPAIEAAVSIPLLNMVSLSVARARALVAPGARVGLLASPAVRMAGVFDA
ALAEAQLTPLWPEDADRMLTAIRTIKAEGPVPAARAILTAAAEELADKGAALIFVACSEFSLIADSLPSS
PPVIDTVDVLAEAIRDHTLAKP
>gi|56708853|ref|YP_164894.1| FAD dependent oxidoreductase/aminomethyl transferase [Ruegeria pomeroyi DSS-3]
MKSRTRVVVIGGGIAGCSTLYHLTQEGWTDVVLVERNELTSGTTWHSAAQVTNFGMNQTMVGLKSHSIAL
YKALAENPEYPINYHHGDGGIRLANTPEQMQGYRHFTSMARGMDVHFEVIDAQECARRHPLISTENLLGG
LWDPLDGDIDPAQLCQALAYHARKAGAEVYRNTPVTALTQHKDDTWTVHTENGDIDCDIVVNACGYRVNE
VGAMMGVHHPVASMEHQYFLTEDIPEIVAAGHRMPLIRCPISDYYCRQEKSGLLIGFYEQDCQTWGMDGI
DPNFVNALCPDDLDRVMDVLEGAFARMPALRETGIRSIVNGPITYTIDGAPLIGPIPGKRNAFCAIGLRA
GLGEGGGHGWLLAQMIVHGEACYDTWCIDPRRFTGHANVELTALKAIEDYQNEFRFHFPHEHRPAGRPAK
TTPLTPVLAAEGAEFTVVNGWERVDYIKPSPEFHPSLTFDFDEAFDVVAAEVKAVQNSVGLAEVNGFNRI
EITGSGRHAFLDRMFCGSVTKRAGRVGLGYLLNHHGMIKAEATIANLPASDRGPARVWYGSAAASEFHDM
DWLSQHIQPGEDVQLRSLTNDQTILVLAGPRARAVLSACARGDWSREAFPWLSVRECFIGFAPATVMGVS
FSGELAYEIHIPNASLYAAYLALRKAGEAHGLTLFGARAVESMRMEKGFLHWKADLITEFDPFETGLSRF
VKLDKGAFIGKPALLDRQSDGPRKMLVTLQIATDRAPARGGASLMVGQRVVGTVTSGDWGHRVGMNLAYA
FVDPELAEPGSEMMLDLCGDMVAARVIAPSPYDPDHARMRG
>gi|56708854|ref|YP_164895.1| NG,NG-dimethylarginine dimethylaminohydrolase, putative [Ruegeria pomeroyi DSS-3]
MTDPTYEFSRAITRRPAPSVIDGLRAEDIGTPDLGRMQKAHDHYVATLKSTGAEVIELPPLDAYPDALFV
EDTALCLPRGAVLMRPGAPSRMGEVAEMAPALRACYGELREIAGPGHIEGGDILVTGREILVGRSDRTDA
AGVAELAGIVSDWGYTLREVFTPPGVLHFKTDCSLLDGETILATERLDASGCFDGYRVIHTAPGEEAAAN
TIRFNKLVLMPAGFPKTAEILDKAGFEVVEIDNSECAKLDGGMSCLSLRF
>gi|56708855|ref|YP_164896.1| hypothetical protein SPOA0065 [Ruegeria pomeroyi DSS-3]
MTTVGEALVAGLAARGVTCVFGIPGVHTIEMYRGLAASGIRHVTPRHEQGAGFMADGYARVSGRPGVAFV
ITGPGVTNTLTAMGQARADSVPMLVVSGVNTRASLGRGMGHLHELPDQLGLVSQVALEAHRVSQADQLAP
ALGSVFDRLATGRGGPCHIEVPLDVAGSGFDGALPAATPALPDEPEAALLDTAAARLDAARRTVILIGGG
AKGMETALQALAERLDAPVVQTVNARGLMHGHPLTVAASPSLDAVRALISGADRVLAIGTELGPTDYDMY
ATGTMPSMAGLIRIDICDAQLARHPADLTIRGDAGATVVGLLARLPEGARTHDGASRATAARHAAREEIG
PYMRSMVEMLEAARDAVPGALMVGDSTQPIYAGNLVYDHDRPGGWFNAATGFGALGYAIPAAIGAAIAAP
ETPVICIAGDGGAQFSLSELMVARDEALPITFVIWNSRGYREIDMSMRAVGVEVVGCDPTPPDFAAIAAA
CGMPYATCAAGDPAGFAAALAEARRHAGPTLIEIDAPYAPEQD
>gi|56708856|ref|YP_164897.1| aspartate aminotransferase, putative [Ruegeria pomeroyi DSS-3]
MKTTAITRRLTDLGGAKWGIYLRAKAMIAKGADVISLTIGAPDVPPPAELMDVAEAAMRAGRTTYSDGAG
EPGLRAALAERYSASTGRAISADQVMCFPGTQTALYAVLMGVAEEGDEVLVGDPMYATYAGVIRATGADL
VPVPLRPENGFRITAADIAARITPRSRAILLTTPHNPTGAILTPEDIAAIGDLACKHDLWIISDEVYEQL
VFDGQGFSSPLAQPDLAERVIVVSSISKSHAAPGFRSGWCIGSEAFTAALLPLSETMLFGNQPFIADMTE
AAVRNGSSVAPGMRARYAARADRLAARLNGRTCLHVLKPQAGMFAMIDVSGTGMTGEAYAAHLLDHAGVA
VMPGASFGDTIDGWVRVALTADDAAFDTACERIAAHAAEFQSEDA
>gi|56708857|ref|YP_164898.1| TetR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MESSRRSFTRESAEHRREALIRATLTLIGRKGVQAATVRSIAEEAGVTLGLIRHYFDGKDELIYAAYQAH
MSQLTDATMDCPRQAGEPAAHQLARIVRASLTPPVSSPQAVGLWAGFLNMVQRDPRMAEVHSRTYYDFRD
RLQALIAPALEEAGETPSPEQLRALAIACNAVIDGLWLEGGALPEAFDPGELVNIGLTSVGAILGLTLND
PGEEA
>gi|56708858|ref|YP_164899.1| polar amino acid ABC transporter ATP-binding protein [Ruegeria pomeroyi DSS-3]
MTATQKLTPEAGAASDLAGTLLIEDLHKSFGDLEVLKGVSLTANRGDVIAIIGGSGSGKSTMLRCINFLE
TPSAGRIVIGGEEIQMRADGTAANRKQLERVRTRLAMVFQSFNLWTHRTLLENVIEVPVHVLKMPRAQAI
EKARALLERVGLAEKEDTYPLFLSGGQQQRAAIARALAVDPAVMLFDEPTSALDPELVGEVLSVMRDLAA
EGRTMLVVTHEMNFAREVADHVIYLYQGRIEEQGPPAQIFGNPQSERLKQFLKSIN
>gi|56708859|ref|YP_164900.1| polar amino acid ABC transporter periplasmic substrate-binding protein [Ruegeria pomeroyi DSS-3]
MNFKTSLLAGLAALALSAGAAAAEEVKIGIAAEPYPPFASPDSAGNWVGWEIEVIDAVCKAAALDCVLTP
VAWDGIIPSLTGKQIDAIMASMSITEERMQTIDFSNAYYNTPAVIVADKSLDIDASPASLAGKIIGVQAS
TIHQAYANAYFGDAEIRVYQTQDEANQDLYAGRIDATQADSIAMADFVATDAGQCCEIKGNVANDEAILG
KGVGAGVRKGDDALREALNKGIAAILADGTHEAITARYFAAPIYSE
>gi|56708860|ref|YP_164901.1| polar amino acid ABC transporter permease [Ruegeria pomeroyi DSS-3]
MEGLLDLLGLAKSAELLSLSPPGWGMNLLRGLGKSLQIAFGAFGFGLVIGLFGAYGKLYGGPVVRDLLAI
YTTVVRAVPELVLILILYFVGTDLINRASEALGYGRVEISGVAAGIWVLGVVQGAYSTEVLRGAILAVPQ
GQIEAARAFGMPPVMLMRRVTIPAMLSFALPGLANLWLIATKDTALLAVVGFSELTLETRQAASSTRAYF
TFFLAAGGLYLMVTLMSSALFQLLERRSRRGQPSLKGAGR
>gi|56708861|ref|YP_164902.1| polar amino acid ABC transporter permease [Ruegeria pomeroyi DSS-3]
MMRLIRPMLMPHRLVLIALAVALALWCALTLRWDWLPKYLPLAMEGLWRTVWLLAASTFLGFLLAVPLGF
AQAVGPWYLAVPARVFCTLIRGTPLLLQIWLLYYGLGSVFPQIDGIRDSVLWPYLRQAWPYALLALTLSF
AGYEGEVMRGAFSGVNRGQLEAARSFGMPRFTLFRRIWLPQAINNVLPTLGGETILQLKATPLVATITVV
EIFAVSSRVRQDTFVIYEPLLLLALVYMVIAGLIALAFRWLENRVPTRRPGG
>gi|56708862|ref|YP_164903.1| hypothetical protein SPOA0072 [Ruegeria pomeroyi DSS-3]
MTMSRISHIELDDSNLPPPTPEIEQERKVAIYDLLEENSFALPARDDRAVPEGPYRVNLSIRDKRLVFDI
QTEDEEKAAEFHLSLGPFRQVVKDYFQICESYFNAVKTLPPSQIETIDMARRGIHNEGSRVLQERLDGKA
EIDTDTARRLFTLICVLHFGG
>gi|56708863|ref|YP_164904.1| arsenate reductase [Ruegeria pomeroyi DSS-3]
MVHPLPQSVLFCCDHNAVRSPMAEGIMKKFYGTGTYVQSAGVHNDMEIDGFCIAVCQEIDVELARHRSRS
FDMMQEWGDDLSSFDLVVALSPASQRRALELTRFFHLDVEYWPIMDPTGLGETRAEKLHHYRQTRDQIIK
HLKERWGEPTERS
>gi|56709228|ref|YP_164905.1| hypothetical protein SPOA0074 [Ruegeria pomeroyi DSS-3]
MSETVKRYFDAFNAGDVQGMLDCLSEDVAHHVNEGQIRVGKEKFAEFCAHMNRCYKELLTDIVVFEAEGG
TRAAAEFIVNGTYLQTDSGLPEAHGQTYRLPAGSFFTLEGGKISRVTTFYNLADWVKQVSNG
>gi|56708864|ref|YP_164906.1| hypothetical protein SPOA0075 [Ruegeria pomeroyi DSS-3]
MAEVTGVRALTGAALDAALEDVARLRIAVFRAWPYLYDGDLDYERDYLQAYRNSDRAIVVGAFDGDRLIG
ASTGMPLADHADDFAAAFADSGLALDQVFYCAESVLLPDYRGHGVGHRFFDLREGHARALGFAKCAFCGV
QRPADHPLKPDSYRPLDAFWRARGYEKLPGAVAHFSWKDLDQENETDKPLQFWIRDL
>gi|56708865|ref|YP_164907.1| carbon-nitrogen family hydrolase [Ruegeria pomeroyi DSS-3]
MKIATAAYPLDWLDSWAHYEDKLAGWVSEAAGQGADLLVFPEYGAMELSTLAGPAVAADLERSIHAVSER
MEEAAALHLKLAGEYGVHVLGASAPVSTGDGRPVNRAELYTPGGGRDHQDKQIMTRFEREDWDIVPGGPL
KLFDTELGRIGVLICYDSEFPLLGRALSEADILLVPSCTEALAGYSRVRIGAMARALENQCVSVMSSIVG
NNDWSDAVDRNTGMGGIFGPPDKGFPGTGILAEGQLNRPGWTYAEIDLTAIAHVRADGGVLNRSHWVEQD
GRAQSVTNSCLSAKAPLN
>gi|56708866|ref|YP_164908.1| translation initiation factor IF-1 [Ruegeria pomeroyi DSS-3]
MAKEDTLEFPGVVKELLPNATFRVELENGHEIIAHTAGKMRKNRIRVLAGDKVQVEMTPYDLTKGRINYR
FK
>gi|56708867|ref|YP_164909.1| maf protein [Ruegeria pomeroyi DSS-3]
MAFILGSGSPRRLDLLAQLGITPDAVRPPEIDETPAKGELPRAYCTRISREKVAAVEAGPDDIVLCADTT
VALGRRILGKPADADEAARFLRSLSGRRHRVITAVAVRRGGRLWERDVVSQVKVKRLSEGEISAYLTTGD
WQGKAGAYAIQGPAGAFVPWISGSFSAIVGLPLAETAVLLAAAGHSKFKGDT
>gi|56708868|ref|YP_164910.1| ribonuclease [Ruegeria pomeroyi DSS-3]
MKGRTIVLDHIAGREAAALMVDGQLDDFLIASDAPPPGTIYRARADRPVKGQGGMFLTTPDGPAFLRQVK
GLAPGAHLLVQVTGYAEPGKAIPVTAKLLFKSRYAIVTPGAPGLNLSRNIRDEAERDRLLEIAHEEMEGH
GFGLILRSSCAEVEGEVIAEDIAAMIAQAQQVLEDDGKDCETLIEGDGPHVLAWRDWTDPAEVVTAAGGF
EDHGVLDALERVRGIAEPLPGGGHLYIQPTRALVAVDVNTGSDTSLAAGQKANFACAKLLPRVLRIRGLG
GQITLDLAPMAKKDRRGFEAALRAALKADSEETTLAGWTPLGHYELQRKRGRVPVAEALS
>gi|56709231|ref|YP_164911.1| hypothetical protein SPOA0450 [Ruegeria pomeroyi DSS-3]
MTCPICGSKTAPSYRPFCSKRCADLDLAKWLNGSYAIPASSEDEEEPLDQEAETPVAPRH
>gi|56708869|ref|YP_164912.1| hypothetical protein SPOA0081 [Ruegeria pomeroyi DSS-3]
MTFDFFEGPAGSGKTFSMVAHARQLIESDALGEGQRMLALTFMNGARRRLTSNLNAEASFRRKFDCLTFD
SFAQSLAKRRSAKLTDEMRQQAEELGQFHGPCFLACELLNDVEVRRWVARTYPLVLVDEAQDLDVHRQGI
VLGLKECCTTVVAADSFQCLSDGQETADFIDRLLRAGTTHTLTQSHRTNKAGLLAAALAVRNGEDIRAVL
NEEAIGKTNRVHWIGEGIELVEVPATARNSGLLAWNLAFQLRLGSDDVALLTPDSANTIIRNAIGTVASK
QRPWPHNAFSVSWEGGDSSVADELAEAIGFPDTAPYDEVCALLEEHSAQPMVKTVIRRIRRLQRVTGQSE
FEKAQLVSFISDAVRTNTRLGFKKSAKIKAMSIHGAKNREFDRVIVLWPQSATGSDEHKRRLLYNAMTRT
KNHCTVIVLGTGRLNSAPFAP
>gi|56708870|ref|YP_164913.1| hypothetical protein SPOA0082 [Ruegeria pomeroyi DSS-3]
MHIHRLKVSGLRGIQNADITLGKHSVLVGPNNNGKTTIVEALALLLGRDRLVRRLTEHDFYQSRPIETSR
ILIIATISGFPENDPQHSPSWFAMGRGGVEKWLNPATGDLAASADGEHTDLSVQIAFAARYDLQELEAET
IRFFVDDEATLGDPFHDETSYTQISSKTLQELGFFMVPASRTWDKWISFTSELFRRLVATLGGLPATAIR
DARERLWEPEVGQRLEEQDGLTAIVEQANSELGKLMPSSPRLRLRITGTDSNSVLESVVPHFAHGDGPTL
PSARHGTGLTSLQSLLLLMQFGKARADANKSFVLAVEEPELHIQPSQQKRLVNRLNALCDQTIVTTHSPL
VAAMFPVEATYFVDNDDGQMSVSPLSKTAPAGPTNHKQHLFFAWRQKLIAALMHQRVLIPEGISDVAWLE
ALQTALELRQSWDSPEDEQSKFSTFVGVVPTDDAKIAETHDVVRRVHHHCAILVDGDQAGRDYLAELNAA
DPSPSAAIIWQTDWKIEHVVAWIAEANLALVLPQLAEANSTAIENAAELSAFLESRKSYAPTQEITSAIL
MGESACRKRAAQLLNALCDTLLDPSVQSSPLFVRETEDGAVMPTFRFEPPDDV
>gi|56708871|ref|YP_164914.1| hypothetical protein SPOA0083 [Ruegeria pomeroyi DSS-3]
MKIGGRDDFENRYMGKFRALAANYGVFVEYERDRAGRDIGLHLTQPDSNRDGKIVTPALIWFQMKGIMDG
TLSREEYDAVEEVALDLEVAHLRFWYLNVQPTYLALYIESVDRFLAIDLQKWVGAHFGADILTLEQKTVR
VKVAKKNELDNEFFRTVLHGNLVPILRQSLRNENDKEIARFLRDSSVVQWLSRCQQQGIQARLTVVKWIS
KMRTEAYFEAREQDGDWELFRTHWQYSMGELALAFPYVKFTPETRAEMVRYPETIEDFDGNEFQIWHESF
IAIETETGMEIDDDELEGECLLELGDGEFSFGDMGGGEIVEHRLALELNEIGVRWAETLAVLVKAEVLSV
DSEPHMVSVAPWHARDV
>gi|56708872|ref|YP_164915.1| hypothetical protein SPOA0084 [Ruegeria pomeroyi DSS-3]
MTDIVTLKAICDELKIDPREARERLRSAASDAKANPELAKARKPRTPWQWVKGSAAEKEARKALAT
>gi|56708873|ref|YP_164916.1| DNA-binding protein, putative [Ruegeria pomeroyi DSS-3]
MPRMSIQSRVSRNIQRIRREKDLSQEEVAHRADIHQTYLSGVETGKRNPSILVVERIAKALGVDVSEIFK
PN
>gi|56708874|ref|YP_164917.1| hypothetical protein SPOA0086 [Ruegeria pomeroyi DSS-3]
MRQHFRVSKQMRSRNTLDAAKAQIAAGRKVILTYGIGEDGRCSCKRDDCPSPGKHPLSKYFPNGVYSATD
DIELVQKALRTHPRANLAISLAGLTVVDVDGKAGKQAVEGLDLPKTVKVFTGRGYHLYYQGECSGGAFKG
DEIDVLTGANRMVMVPPSTHPSGKRYRYSSQSPSGMAAMPKNLSKLKPDRTQHRKEGPQTASTDLVIKSG
SRNDFFFRTACFLRRRFDDKNAVEAMLETLNNDFTEAPLSPSELRSVIQSSGNYVEDTAALFGPPKTTEP
LPMEFLYYPYIPYFGVTLLAGNPGMGKSLLVSRLIAAVTSGSPWPLSDECAPKGKVLLLSAEDNWQRVTL
GRLLEHGADISQIRMMQRFKILCPDNLEAMARYIDEERPKLVVIDTLTAYMGSGRDMNRQNEVGEFLGRL
TEIAEDAGCAVLAIGHLNKQSSEHPLFRIVGSIGFAASIRSALFYGTDPTDRSRFALAHGKANASELGKT
IIFERFGGGRDETPVLHPVEFSDANEAEVCRVETNSVGRPASATDSAREFILEFLSDQPVRWEAVESAVT
SRSLASVGTLNVLRADMAKSGEIVQVGKGKSTRWKLGEPRTDE
>gi|56708875|ref|YP_164918.1| phage integrase family site specific recombinase [Ruegeria pomeroyi DSS-3]
MKRKLTTKFIESQKPNPSKRLDFRDELMPGLVLRISTSGTKTFCLHKRISGKMRRLTIGRFGVVSLAEAR
ERVRKVLYEIETGRFEDRTGVEVETKPTLGDVIPDYIEKHAKVHNRDWKRKEALLAKFAALHVKRIDEIK
RADVVKACDLIHKSAPVSANRALAHLKHLMGWCVERGMIDASPIAGMKPLSKERSRERVLTDDELGALWT
ACDAEGYPFGDCMKLLILSGQRRAEVAEMRWTELDLEKRLWTLPSQRAKNGRQHTVPITDAMIDVLRRVP
RFLGSDYVFTTTGKSPVSGFGRLKDRLDKALPEGTEPWIIHDLRRTMSTNMAMLGVPQPVTEALLNHKTG
VVSGVAAIYNVYSYTDEKCEALEQWNRHLTKMTQGHSDRLAGKMSAQFSA
>gi|56708876|ref|YP_164919.1| hypothetical protein SPOA0088 [Ruegeria pomeroyi DSS-3]
MRLKVHAPVPNSIRTREEKILARFPKSSSLLNSVRSRTDRYKFGISDREVNKFYRFSDYKNSESFFAHKF
RQFGKNYIDKTDVEIDIANSVNTIGPGTESLPPADRFIGLAKKFSGELLQARQLKTPYVSILTGPTGSGK
TAYSKCLFSSGAQVFWANGIIPSRVEFTKFFKAGQELSSQQILDAIHQCQTRDLLIYLCFSEVGVPSKDA
LEGILSSHGEYREHHNKIRGMVALAEGKKIDGSSFTLSEAHNIWKEQVGYFPEEVCRNILGKIKSPSFHI
QFLVSLDGFDALKTKDFLISDRYHGPISAVADLLSDALNQVARYGGTPSSHNTNLVVFMRDTTYARIRLE
LNLTPNGERRIPVRWIVPPPYKILAETIVSAVDGDVSSSVGQEGLDSFVVNVRKNLINVLKGTSVGLSIN
QPISSAFSWNARHMKRHIRRICIWSLENYLISHGDQLDERQKSAGLSEAWLWEKTINNRALKDMAAYSVL
EAFFLDDTKCLQSKFRLNSREISNFLEGSDLVSALAAIDERPELEGLFDSIFNYMTKGLDESEGKCYPHT
LVFVRILQILKFDPGITIEDLHDEISCFYDNISLEELRFYTICLCENEYVVFEGVENSASLDECRFFVSN
FGFILLNKVIYSVSYFSQSLMISELIRSGFGTHFRERNFRTNEDWIANCVFNSIIAYNIVQDAEIGERKC
RQSAGKDFEKFSLCKRLRESLIWEAQRIFSRRRFSGNLEWHFNNIPEKLKPLLGEFPNFDTLEEIWK
>gi|56708877|ref|YP_164920.1| hypothetical protein SPOA0089 [Ruegeria pomeroyi DSS-3]
MWGTHLKQKGRWWHYYRSVPREFADVERKPLISFSLKTGDFTEAKRMAADISARLEQDWRDAKARGVSLC
AQDAAEQYRAAAAVQRQFGFAPKPAADLTDEELLERLRLLISGQQSAPERGAVLGLTAEPQYSLSDAFDR
FWDYIKDEWIRDSRDQQRVKRNIYLGSRPIDFMLLA
>gi|56708878|ref|YP_164921.1| ISSpo7, transposase [Ruegeria pomeroyi DSS-3]
METLERQRGLRPDHGGPGHRKRRAQDDHDRRDLSQGTPHCVEPVREKGGRGRQIGRTKGGMNTKLHAVAD
AKGRPIGFFMSAGQVSDYTGAAALLGSLPKAGWLLADRGYDADWFREALKDKGIKVCIPGRKSRKKAVKY
DKRRYKRRNRIEIMFGRLKDWRRVATRYDRCAETFFSAIMLAATVLFWL
>gi|56708879|ref|YP_164922.1| IS3 family transposase orfA [Ruegeria pomeroyi DSS-3]
MSMTMDDSIKRWTAKRKTALVIEIIQGKTTVAEASRTFDLTPSEIEGWVEDAKRGMENSLRANPLDIREQ
YEKQLKDLQEAYGEAMLELRARKKLAALMVSH
>gi|56708880|ref|YP_164923.1| FAD binding domain-containing protein [Ruegeria pomeroyi DSS-3]
MKRFSRRAALLGAGGVAGWGLSRWLGADLPGDGGTSRITAPSGEAWLNDASGLSATPIHEHLILQHDSGD
DLIAAIRRELAEAKADGRPVNVGAARHSMGGQAIPRNGTAITFDNGSVEIDSASQTYLVHAGARWSQVIA
ALDPAGWSPKVMQSNNDFGVAATFSVNAHGWPVPFGPMGSTVRSLRMVLPSGDLVTCSATKNADLFNLAM
GGYGLVGVIVDLEVEMVPNTRLTPTFELMDASAFGEAFRSATEDPAVTMAYGRLNVERAAFLQKALLVTY
RETADQTDLPAAAGSGWMSHAASRLYRAQLGNETFKSFRWWNETRLGPALGSGEVTRNTLLNEPVATLDD
RNPDRTDILHEYFVGFGAFDGFLAACRDVIPASYQEFLNVTLRYVAQDDQSALSFATEPRIAAVMSFSQE
LTQRAEADMARMTSALIDRMVALGGAYYLPYRPHATVDQFTSTYPGAGDFARAKRGLDPQLVLRNNLWDN
YLGQL
>gi|56708881|ref|YP_164924.1| hypothetical protein SPOA0094 [Ruegeria pomeroyi DSS-3]
MTTLQKLSLGYFLALMIAASLNYVPGLTDENGLAFGIFALDIYDDALHVASALWALVAGMLSHRAARSFL
ILFGLAYLGDGIFGFFTGFGYLDLGIFTNDPAGIDLSLPRFLANLPHLALGGVAVWAGYRNAGQTP
>gi|56708882|ref|YP_164925.1| hypothetical protein SPOA0095 [Ruegeria pomeroyi DSS-3]
MLLWRWTKRLALLLAVLAIGLGAPVVYVETMCRGNGLTQPYDALISPAHHRPESRTLLTYPEWHIVHAYE
DYAKVLSSGDPHDYGFLRAIGGFWNSLCTLSRIAPEHGGVDGGTKQMNYVIGVSFTAELALKAAYEETLG
RLFAALRGPHRAPLDDLSADQAAAYAKFLQQVPWYKWQFREDVKDLRDRPSTVLRDSERRLALGLEYRAK
AAYADVIAQAVAQVGQDELVLRMIVTGVEAGQLARYQGVRVLQERPEGIEIETPRYRALTHLIQQLAAEK
VNLVEIAGNDDILFTAISNRPAEPGALFSSERQGFGDYRHLILVKVPELAERLRLLNESGLRLEHIHDY
>gi|56708883|ref|YP_164926.1| histone deacetylase/AcuC/AphA family protein [Ruegeria pomeroyi DSS-3]
MPVGGWIQPPAAAGHAESPESKRRFKSLMDVSGLTAQLSVQSAEPVTETDMARVHSEAYLDRFKTLSDAG
GGNAGEFSPFGSGSYEIAALSAGLVKRAVFDVVDGTFDNAYALSRPPGHHAMRDGSMGFCLLANIAIAIE
AARAERGLTRVAVLDWDVHHGNGTQDIFYEREDVLTISIHQENCFPPGSGSGSERGAGAGEGANLNVNLL
PGAGHQSYIDAMDILVLPALHAFRPELIIVACGLDANNFDPLSRMTAHSGTFGYLTRAVMGAANDLCGGR
LVCAHEGGYAEAVVPFCAHEVVRTLAGVESEVVDPFRAVAEANQPPADFVAFQRQRLECFKASL
>gi|56708884|ref|YP_164927.1| branched-chain amino acid ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MTRLILALAALVLASVPYWLGGGALALVTEMLILLAIAQSWNLLAGFGGLLSLGHHAFVAIGAYLLFAVT
RDLPISPYAMIPFCGVGAALLALVLTPILFRLREVYFAVGMWVAAEIVKIVVSRMDYFGASSGLPLFAAR
RIDTSLLPSMGYWLALALTAGLCVGLWWLGRSPWGLHVHAMRDDEIAARSLGVKTGRIKALLFILSAAGS
GMAGAIGFMGSLYVSPIAAFDINWTVYAIFICVIGGLGTIRGPVIGVMLFVALREALSASPGWNLIALGL
IAMLLMIFAPRGIDGLIPRLGNLASKRHFKEG
>gi|56708885|ref|YP_164928.1| branched-chain amino acid ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MSIVIDILINGLFLGGLYALFGLGLTLIFGVMRIANIAHGEIAVAGALALFTLGGNLPVHPLVLLPVVMV
LAFGLGWLLQAQLINRVLSADPMPALLLTFGLSVVLQNLMVEIYGADNRSIDIGTIKTAGFQIGGVTLGY
LPLAIFLLALVLFGLLHLGLQHTRLGRAIRATSQDADIVALFGIRQKRVFALVMALAAGFAALAGMLLAM
RSTITPFSGAERLLIAFEVIVIGGLGSIWASYLGGIALALVHVASFYFDPASGLLYGHLTLLLFLLLRPQ
GIAGKVVTR
>gi|56708886|ref|YP_164929.1| branched-chain amino acid ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MSMLEIENLDARYGDFQALFGISLNVRRGETIALVGANGAGKTTLLRAIAGLGQYHAGVLRLNGRDIGSA
SPQELARMGISMVPEGRRLFTGMSVAENLMIGADLGRGGHWVRDAVFDLFPEIAVMAHRPAGLLSGGQQQ
MVSLGRALMTNPDLLLVDEVSLGLAPVVVDRVYAALAQLKERKTTLVVVEQDIRRALDVSDRFYCMLSGR
VALAGASAPAAFDAVSRAYFGEAA
>gi|56708887|ref|YP_164930.1| branched-chain amino acid ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MLEARNLSKSFGGLEVLRDVSLTVEPGICLGIMGPNGAGKSTLFDLLMDVTRADSGTVSVAGRDVTGLDT
AGRVKSGMARAFQVPRAFASLSVEQTLYLAQHAGHGVAPQKAYDKVEAVLEITGLTAMRHQMGGALRLLD
RKRLELAKALAADPQVILLDEISGGLTDREAAEMVTLVHRLKEAGLAVLWIEHIAHALQAASDRIMMLAL
GRKVIEDTPQAVVADPQVRALYLGTPA
>gi|56708888|ref|YP_164931.1| branched-chain amino acid ABC transporter, periplasmic branched-chain amino acid-binding protein, putative [Ruegeria pomeroyi DSS-3]
MTRNQSLNRRSFLAGSAAFIGTLAAPSIVTAASKKLRIGFISPLSGPRASFGTSDQWMVETISKHLSGGL
ISGGASHEVEIIVKDNQSNMNRSISVGNELLLRDQVDMLLINDGDAAVALGEIADIHGVPTMSTMQPWQA
WMFPRGSNPEQGFPWTFHFFWGADDAMSTFTRLWDQIDTNKVVGDFYLDNPVGNAFADPAMGLPGFIERG
GYSRVDGGMFKIDADDYSGQVSRFKEAGADIVTGFGFPPHWITFWNQAGQAGYTPKACTFAAAFLFPQAI
EAMGDRGDGMTTEVWWTPNVPFASSLTGQTARELADAWEAESNAQWVQTLGYSHALFETGLNALVQSGAP
KDRAAVRDVFASTRLDTVVGPVNFADSPIRNTARTQLAGGQWRKSSGKHAFELVITENTLAPDIGVESET
IALPQV
>gi|56708889|ref|YP_164932.1| LuxR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MNRYDLSEFVLKLMDKANTHTPLHFQKFMMDLVRDITRFDAAWWGWSLFRGGRIAMVHTDVSDLPEDFEP
RVKAQLANDPFVRTGRNLQRYARSITVAEAVTDPSFRDFAGHFNLTQMLNGHCKVRDGRFNFFMSLYRRG
AAEPFTDTENADFLAILRHIEQALSMSLQLDLGMRVDPNTDWALVDATGELFLSSTGFQHRAEFSATSRG
RVPDLLRAAAATASHVGRDGAVFTRERYSDDLWLLRLTPPNPWGDLSRREKLVANCLVQGMTMRQAAERL
DVSVNTVRNQVSSIYRKTGVENRVQLLRLANPTLTEAAPDEA
>gi|56708890|ref|YP_164933.1| hypothetical protein SPOA0103 [Ruegeria pomeroyi DSS-3]
MVIVHLHYIWFSRLLASLACNATGPADWRGPFQVEEDMPEALKDIIAAKSRRFEENFARGDVPALVADYY
NNDPVVIGQGVATFTGREGATQYFTGAVEAMKSAKLTTYTIQEGEDSAIETGGVKLTPREDGAAQIDLTY
VLVWQRHADGWAVHMDYFMPGVVR
>gi|56708891|ref|YP_164934.1| aldehyde dehydrogenase family protein [Ruegeria pomeroyi DSS-3]
MTIDAQAVAAASEFEVANPAGGIAGHAPNATLEDLDRAVAAAQGAFTLWSRQDDATLRAACEAVTAKIGE
HAEELAQLITAEQGKPLNGLGSRWELGGAQAWAGYTSSLALPVKILQDDDAGRVEMHRKPLGVVGSITPW
NFPLMIAVWHILPALRTGNTVVIKPSPLTPLSTLRLVELMNEVLPAGVVNVITGDDKAVNLGAAMSAHPG
IRKIVFTGSCATGQKIMASAADSMKRLTLEMGGNDAGIVLPDVDPEAIAEGLFWGAFINNGQTCAAMKRL
YVHEDVHDAVCEALVAFARNIPVGRGDDEHAILGPVQNAVQHAKLCRLVAAAKNKGNVLLGGESGEGLFF
PPTIISGLENGDPLVDEEQFGPVLPIIRYSDLEAAIAAANNSPNGLGGSVWSPDIDKARSVAQRLECGSV
WINKHGAIQPNVPFGGIKASGLGVEFAEEGLAEYTDIQVVFS
>gi|56708892|ref|YP_164935.1| transcriptional regulator, putative [Ruegeria pomeroyi DSS-3]
MKRREEIEKELGLDLCPIRTVLAQIGDKWSLLIILLLRDGGQRFSEMQRAIPDISQRMLTQTLRKLERDG
LVSRTVTPTIPPRVDYAITTLGRSLFAPIGAMAQWAVEKQPQIIEARRAFDAAG
>gi|56708893|ref|YP_164936.1| hypothetical protein SPOA0106 [Ruegeria pomeroyi DSS-3]
MIMSLRTTSAAAALALTALSAAADSAANKEIAVGLLEQGLAKGDRDFIMTHVAEGYIQHNPQAADGREGL
LGFVSFLETLDPPVTVNPVRVIADDNFVVIHQEAEFFGPKVIIDVFRFEDGKIAEHWDSIQETVTETASG
RSMTDGTTKITDLDKTAENKALVTGLVKDVLMGGKIDRIDDYIAEGYMQHNPFVPDTREGLKGFVAYLGE
NNISFWYSELHLVVAEGNFVFTQAEGVYDGTPTAFYDIWRIEDGMIVEHWDTVQPIPTEFAHENGMF
>gi|56708894|ref|YP_164937.1| LysR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MPLPIRDLYTFFVVARAGAMQAAAHELGVTPGAISQRIRSIEDRYGKRLFVRSRDGVSLTASGKALWKEV
KSAFAQIETSHNRHIGKDGKTILRISAAPTFAHSFLVSNLASFNEDHPGIRFNIETEDRLADLRSEPIDL
AIRHGLGDYAGLRSEWLCAPELIVVGSPALLESQHPVKEPEDCLRFTLLPDETGLDWALWFEAHRVNAVA
PSYGTAFKDGFLTVKAASRGQGLALINDIYVREELADGRLVQLLPGSWPTKFAYYAVALPETFDRPAVKA
FVKWLCAACAVEQMHQK
>gi|56708895|ref|YP_164938.1| hypothetical protein SPOA0108 [Ruegeria pomeroyi DSS-3]
MRAPTINQNWTIVLFGFLALSLAFSARAALGLIMPVWQAEFGWSSGYISGVGAAALIVMAGVAPFAGRLV
DTRGPGLALNLGMGLLGVGCAVVAAMSSKWMFIVGFAGFGAVGFGIVATHVVATAVTRSFDRNAGLAIGI
ATSGATGGQFLIVPLIAALLAFASWRWSFGALSVMSLALVPCIRASLPPRVETDGGGDGDARTTMAADFV
TIVRLPAFHILFWSFLICGFTTTGVIETHLLPFASFCGFPPVPSATAYGVLSLVNLFGMIAAGWLTDRMN
RPLLLGAIYALRALTFVFLSNLPGMPIEMLFAFALFFGAVDYATVPVTASLVASHVGLKVMGLAMGMISA
GHAIGGAMGAMAGGYLFDQTGNYDLLWTASLWLAIGAGVMVMFLRERGRQPAGA
>gi|56709232|ref|YP_164939.1| MarR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MTEARKIPKPSFPYGSPGELNSFLPYLLTRITHIWSSELNQALASEKLPTPKLRLLSSLSAYGELTVGQL
ATLGVMEQSTTSRTVDQLVDEGLAARSISDADQRKRTVVLTRKGKKKLAEISPLINDFHAELVGNVDPDK
LQTCIEVLGEILKGKTDY
>gi|56709233|ref|YP_164940.1| MarR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MGEAATKSDRQQNQTRLWLNILRLHGLVFGDLNRQLLDETGLSLAKFDAMAQLARNPDGLSMGKLSGALK
VTNGNVSGLVNRLIKDGMVVKAMSADDRRSFSAKLTDAGLTTFKQASEAHNRILAELLRAVSDQDMVEAS
AALRGILESMQTGASLD
>gi|56708896|ref|YP_164941.1| hypothetical protein SPOA0109 [Ruegeria pomeroyi DSS-3]
MDDFPDDMWSTRTKFRHGQCDPAGIVYTPNFFDVFNRAIEEWFDDALQIPYQDVIGRRRIGLGYVAASAT
FFTPFMMGDEAEAFVAVDKIGTKSYTLSVHLVKDQREAVRGTLTTVTTNLDAHQSTEIPDDILEALLTYA
EAYKLDKD
>gi|56708897|ref|YP_164942.1| putative indolepyruvate oxidoreductase subunit B [Ruegeria pomeroyi DSS-3]
MKDDTVKLPLRPEADATDRPLSIAIVAMGGQGGGVLTNWIVELAECQGWIAQSTSVPGVAQRTGATIYYV
EMMKPGRHGQRPVLAQMPTPGDVDVVIAAEYMEAGRSILRGIVTPDRTTLIASDHRSLSTIEKMAPGEGI
ADSGAVTDAIGIVAKRRIVFDMNRMAVENGSVISSALFGSLSASGALPFPREDYHAVIQKSGKGVAASIR
TFDAAVAQVEAGEKGEAPGTLEQRDTMPAALPRSLANPRANALLQRLRTDLPVEVQAMAYLGLKKVVDFQ
DAAYGEEYLETLAEIAEKDRAAGGDNRGFTFTNTAAKYLANAMAYDDIFRVADLKTRAERRRRIEDDLKL
SEGQIFGTTEFMHPRLEELSSALPAGLAGWLRGKRELYAWLDRRVDKGRRVRTYSLPGFLMLFFLAGLKR
LRRRSLRHAEETEHRTRWLTEATGALQSNYDLAVSILKVRRLIKGYSDTHARGHSKFDKVMQTIRSISQR
DDAAMWADRLLRSALKDGDGDNLDGTIKTIQSF
>gi|56708898|ref|YP_164943.1| indolepyruvate oxidoreductase, IorA subunit, putative [Ruegeria pomeroyi DSS-3]
MAERSFAKEVEHLKLGEGDVFRGEGILAITKALLQSGISYVGGYQGSPISHLMDVLADANDILDDLGVNF
QSSANEATAGAMLSASVMYPLRGAVAWKSTVGTNVASDALANLASGGVTGGAMVIVGEDYGEGSSIMQER
THAFAMKSQMWLLDPRPDQECMVGLIEKGFELSEASNTPVLLQVRVRSCHMTGEFVCKDNVRPDFTLKDA
MNSPKRDLDRIVLPPAAYEHEVEKIERRLPAAIDFVTENKLNEFFGPTGKDKSGKTGLIVQGGMYNSTIR
ALQFLGLSDAYGNSKLPIYVMNVCYPTIPSEIEAFCEGLDAVLVVEEGQPEFIEQSITTNISRLRKPTEV
HGKKYLPMAGDYTVTALTKGIGQFLEDYEASLLGNRAPAPDPVPILTNPAVAALKDVVPPRPPGLCTGCP
ERPIFTAMKLVFEELGEHHVSADIGCHLFSILPPFNIGATTMGYGLGAASSAAFNVKGAKRSISIMGDGG
FWHNGLTSGIGHAVFNKHDGVFLIIDNYYSSATGGQDILSSRAFNKRRTTNNSIVDAVKGVGAKWVRQID
RTYDVNRMRAVLIEALTTDAEGPKIIVASSECMLNKQRRVKPQVAKALKAGKRTVKERFGVDEDVCTGDH
ACIRLSGCPSLSVKELDDPLRDDPVASIDTTCVACGNCGEVADAAVLCPSFYRAEVIHNPSSWDRFKSSF
TLPAITYLQKRRARRAVNFEEAAR
>gi|56708899|ref|YP_164944.1| phenylacetaldehyde dehydrogenase [Ruegeria pomeroyi DSS-3]
MQVARPDSLVSQILPAVADYLDSPAKLLLGGTSTAASDGRTMDVFNPATGKKLAEVPWGGAAEIDLAVKA
AQAALEGDWSRMRPVERQRVLLNLADLIEANGEELAQLETLNNGKSVMLSRLVEVGNSSNYLRYMAGWST
KIEGSTIDVSIAVPPGAKYQAYTRKEPVGVVGAITPWNFPLNMAIWKLAPALACGNTVVLKPAEETPLTS
LRLGELCLEAGLPPGVVNVVSGTGAEAGAALTAHPGVNKLTFTGSTEVGKIIGIQAMRDMKRVTLELGGK
APMVMFDDMDLDQLSEAARIGILFNSGQTCCAGTRIYAQRGIYDRICETMANVVGALSVGSGLDPANAIN
PMVSAKHQAHVSACIAGGVEEGATPLLDTGAYDGEGYFVRPQIFTDVRQDMRIMQDEVFGPVFTITPFDD
PDEAIRMANDTRYGLGASIWTTNLNTMHRYVPQLQAGTVWVNSHNVPDANMPFGGYKQSGIGREHGRAAL
DAYLETKSVCIAVR
>gi|56708900|ref|YP_164945.1| hypothetical protein SPOA0113 [Ruegeria pomeroyi DSS-3]
MTTTQHTPTPRDNFLRENNGRHQIHPMTHPLIIENRPPRIIVKGEGSYVTDIDGKTYVDGVGGLWNVNVG
HNRPEVKAAITAQMEEISYYSSFAGTVTPPSIELSAKIMEMTADEDMARVLFSANGSDAVETALKLSRQY
WKLEGEPERTGFISLKQGYHGIQFGGTSVNGSTLYRSAYGPLLPGCYQVDSPWTYRNPYSEDPEELAEAV
ITQIDRLIQHQGAHTIAAFIAEPVQGAGGIIVPPASFWPRLRQVLDKYGILLISDEVVTGFGRTGAMFGA
RGWGVKPDIMCFAKGITAGYIPLGATVINERVFAAWQKGIDPTGFIMHGYTATGHALGCAAANATLKIVE
DEDLPGNAGRMGQRLMEGLKDIPNWSSLVGEVRGKGLMVGLDLVADKDTREPIDPGKGQGEMVATFARDE
GVIVRPAGPVIIISPPLTLSEKETDKIVDALIKALRRYEEEK
>gi|56708901|ref|YP_164946.1| nitrilase family protein [Ruegeria pomeroyi DSS-3]
MLPLQDFPKFTAAAVQASPVFLDAHKTAQKAVDLIAEAAGNGAELVVFPEVFIPGYPYWNWITDPVTGGA
WFEKLVRASVFADGPEIDVIRDAARAHGCHVVMGLNERSPVSLGALYNTLLFIGPDGEVIGKHRKLVPTW
AEKLTWTGGDGSSLKVYDTAIGPLGGLACGENTNTLARFTLLAQGELVHTASYISLPVAPPDYDMAEAIK
LRSMSHSFEGKVFTVTATSTVSEEIIEAMEQVRPNARELLQRKSSAYSGVIGPDGREVVTGLIDDEGIVY
AEIDLGKCIQPKQMHDITGHYNRFDIFDLRVNQRRQTPVALSGAAVTFTNEHEQADGSTEPASE
>gi|56708902|ref|YP_164947.1| gentisate 1,2-dioxygenase [Ruegeria pomeroyi DSS-3]
MAPTEIKPEDDILGRARVRDTPELEAYYDDLAKIETGALWTVANDIEPWEPTPKSAPVHWKWSDLRREVL
RAIDLVRPEDAGRRVVYLRNPQRKDVSAACGWLFSGIQTMKAGERAGAHRHAASALRFIMEGSGAYTIVD
GHKVELGANDFVLTPNGTWHEHGILESGTECIWQDGLDIPLTNCLEANFYEVHPNDYQTTDIPLNDSPLT
YGGPALLPQLDKWDKPYSPLLKYSWEPTYEALLNYAKASDGSPYDGLILRYTNPQTGGHPMLTMGASMQM
LRPGEHTKAHRHTGNVIYNVAKGQGYSIVGGKRFDWSEHDIFCVPAWTWHEHCNTQERDDACLFSFNDFP
VMEKLGFWAEQALEDNGGHQIVAD
>gi|56708903|ref|YP_164948.1| fumarylacetoacetate hydrolase family protein [Ruegeria pomeroyi DSS-3]
MKLVTYRDSAAGEGRLGVVVDGQVVDVEWLGEAAGEALPDSMLDLIDMGPDALAAITRALDATNAARPAG
LAVPEENVRLLAPIPRPRKNIFGIGLNYVEHVAESAKSLDTSKELPKEPVVFSKPPTSVIASGEGIQHNA
AMTQQLDWEVELAVIIGKRATRIAKDNAMSHVFGYSVINDVSARDNRRAGQWIFSKGQDTFCPFGPAIIT
ADDVPDPHNLDLWLTKNGVEKQRSNTRHLLFDIPTLIADISSGITLEPGDIIATGTPAGVGAGRDPQEWM
WPGDVIECGVDGIGVLRNPVVKIGD
>gi|56708904|ref|YP_164949.1| Asp/Glu/hydantoin racemase family protein [Ruegeria pomeroyi DSS-3]
MSAIQDNMHKTLRIGQIVPSSNLTMEREIPAMMRAREAQFPERFSFHSSRMRMKKVTKEELKAMDHDSDR
CALELSDGAVDVMGYACLVAIMSMGKGYHRESQARLHQVTVDNGHPAPVVSSAGALVDGLHLMGAKRISI
VTPYMRPLTNLVAEYIEAEGVEVSDSIALEIPDNLEVAAQDPTNLLEIYKRVNLKNIDALVLSACVQMPS
LAAIQKVEDECGIPVLSASVATTHQMLKSLGLHAEVKGCGALLSGAYA
>gi|56708905|ref|YP_164950.1| hypothetical protein SPOA0118 [Ruegeria pomeroyi DSS-3]
MTRLKTFQELFRRDRRPGDLVFAYIFLGFCLFLLFNLRDQAQWLDNAKTVAQPAFWPTVAVVGMTLFAGL
HLVGSLVSPRIPGRLKEGAFWIRSGEYVVYFLIYVWCVPIVGYLLSTIVFAVFLTIRLGYRSKQALGFAA
FFGFAVVLVFRAGLQVKIPPGQIYEHLPDAIRTFAMVYL
>gi|56708906|ref|YP_164951.1| hypothetical protein SPOA0119 [Ruegeria pomeroyi DSS-3]
MEAILGGIQILLSWQVLVALLVGSVGGVIIGAIPGVGAAVAIAILLPATFAFEPIVGLTILLGIYGSSMY
GGSIPAILLNTPGTPVNALTTYDGYPMTKRGQAHRALSLAYSASFFGGIFAIICLILLAPVLAWIAPNFG
SREIFLAALLGIILVILAHRGQIMAAGMMAFFGIFLSTVGLESAKYTHRFTFGQDWLTGGINLIVIVLGL
FAVSQALMLLLEQEKEPESARVEGSLWGGFAELLGLKRVASVASSLGVMMGTIPGVGEFTAQFLSYTYAQ
KTSKTPEAFGDGSPEGLVASECANNAVPAAAMIPLLALGVPGEALTAMMLSVFYVHNVIPGPQLFQNELD
FVMALYMAMLLLNVIVIIFLLSSTNLLLKITQIPTRFLGMMILVLSFVGVYSMRNSAVDCAMAAGFGIFG
LILKRLNLPIVPIILGVVLGAIMEVKLRSAMARIEEPLDWFNRPISVILILLILFVIGNHYRALILEHRS
RLQKAADGEPEDAAEGKVAPEGF
>gi|56708907|ref|YP_164952.1| hypothetical protein SPOA0120 [Ruegeria pomeroyi DSS-3]
MKKLFSALALGASLMGTAAVAEYPEKPVEFVIPFPPGDLEDLLTRIIADEFQDTYGVPAAVVNKPGGGGG
PFPGAVSVANAPADGYTIGSFVIGVPVVGPTIGIPDLQPDPFEPIGIFLTYPFVVAAKGDAPYSTMEELA
THAKDNSVLFGHFGERSIPRRHMIAVSRQLGFEFSSEAAFDALDCNTLASGDADVISTTAQLIFPCLDNL
KILASATNERISIMPDVPTMGEIAPELDLSTWNGLFVHKDTPADVREKIEAVAIKALNSDAAKELAANTG
AVIYWKSAQEAKAQIESDIKVLKIIDDLVAGN
>gi|56708908|ref|YP_164953.1| sulfatase family protein [Ruegeria pomeroyi DSS-3]
MTQNRNILWIMCDQLRFDYLSCYGHERLNTPNIDKLAKRGVRFTNAYVQATVCGPSRMSAYTGRYVRSHG
STQNGIPLRVGEPTLGDHLRDVGMRNVLIGKTHMRPDLDGMKRLGIDPDSEIGARVGEGGFDAFDRDDGV
HPTGYRKKEPAYNDYLRHAGFQAENPWEFWANSAEGKGGENQSGWLLTHADKPARVPEEHSETAYMTRRA
MEFMEAAEKDGRPWCAHLSYIKPHWPYIVPAPYHDMFGPDDVKPAVRSDEELKAAHPLFKAMTEEVYSRN
FARDEVREKVIPAYMGLIKQIDDQLGQLFAFMQERGLDENTMIVFTADHGDYLGDHWMGEKYLFYEAAAK
VPLIIYDPSDKADATRGTVSDALVEMIDLAPTFVDYAGGVPPMHILEGKSLLPLLHDDDSSWDRQYVFSE
LDYSNLPARLKLGRDIQDCRATMVFDGRYKLVEVMGFAPILFDLEVDPDELKDLGRDPSAEEVRQRLTSA
LDAWHRNTRQRITKSDAAYRALDPVLRESDPDLMAGVIIGYWDEDEVEAEKRRIARILGENS
>gi|56708909|ref|YP_164954.1| ISSpo9, transposase [Ruegeria pomeroyi DSS-3]
MSRPTPPTYKTRNWPAYNKALKRRGSLTIWFDPAMTWDAAPTGKRGRQPDYSDAAVQTCLTMKVLFGMAL
RQTTEFVESLLGLIDLDWAVPDFSTLSRRQKTLKVNIPYRGSDGPLHLLIDSTGIKVEGEGEWNARKHGG
TKRRVWRKIHIGIDEKSLEIRAAEFTTSEIGDAPMLPELLDQIPPEQEIGSVTADGAFDTRKCHEAIAAR
GAAAIIPPRKNAKPWKPDTAGAIARNEILRTSKRVGRTIWRLWSGYHRRSRAETKMHCVKLLGQRLTARD
FDRQVAEFQLRVAVLNGFTALGTPITDAMG
>gi|56708910|ref|YP_164955.1| hypothetical protein SPOA0123 [Ruegeria pomeroyi DSS-3]
MRRQFRCLRPGQSAEMALGGMTKITWQSSESFEVEEAGTHHVRRGGLGQGADDPLTGLFAQPEVRKVFEV
VEAQRHVVRPTKRSAGPNEIAVRLDVDDGADYILAVRHPSGAIQFIGGQEIGAGGKRSNSALRTRRTRNY
AIEFRAPISFYAEKDVRRGIVGDIKDAVVDAIVIKVKDFIAKKTVDLAEAAIWKLLGREPGMKQLSIENG
RLNLAPVSGRIKPGPNGRALLFIHGTFSTTDGSFGDLASAEFFGELARTYGNAIYGFDHYSVSVTPEKNA
SDILKTLPSGGIDCDVVTHSRGGLVLRTLNERQGDLSQGKRFRLQRAALVACPNEGTQLATPDRWQGTLG
WLANLLDLFPPNPITSNAALVMHWVTWFAKVGVAAAEGLDAMNMTGAQIRQLQSPPSPAPGQYSALVSNC
EPNGKLWARALDLGIDWFFDEANDLVVPTSGGWRIDRVPDFIPKDQIGAYGPGGNIPAGPRQVTHISFFD
RAETLQFVLRALSGAPQHLPELDLARALPVSRSADGAVLPAMAEEVEPQVAELPAFETVLHRAEAAAPRK
APARRLAAHPNSSVFELIVLDPEQITRMGFPRVEEEEAEDGHGTPFLYAAYGGARVMVPFYLKKAHLPPK
TGNETEDKRLKSMAAEMGQRWGKLFGFHRRVQSVLDGNPRARELSPDELRIFGELLFETLLPQEVRRLYD
VARSREHDKLFVIFTSMIHWVFDMPWEFARDPERGTYLATEDVHFIRNVLTQTPVEKLSPRESLKILIAT
SEPRDQRRVSATEEIAKLRKAITELQRDGLIEFEIRKNATPRNLHHEIATGNYDVVHFIGHGYWNTKSGE
SGLVLEDETGNSRPLGGRPLREILSGRGIRLVFLNACDTGRSRRASGVETTSLAGVAQDLFGRGVPNVVA
NQFPVGDNAAVAFARTIYEYLAHGKTIAQSVREARISANYEKDGQSMDWAIPVAYARDPEDRLVVERKAA
GGDGLG
>gi|56708911|ref|YP_164956.1| hypothetical protein SPOA0124 [Ruegeria pomeroyi DSS-3]
MRFRVFAVLSFAVLVALAGTGVPQAQSVSEAPYSISRFRLDDFSTPILHRNETASGSLEIFFVVPQFQVP
EGKERQFLTEMVDNYWRGLAVVPGSGTAPVGIVSSANSVVLSANNTTMESIKTHSELVWNVESFGDVQVL
GEEVAAQDGVSLSLFYQAVPVRVVHRSDTNADPSSITRASNAISLQYRVFDNTKLGALIGGFAGLLAAWV
YFYLRTIRRIRDRGRASLRLQELQTRLEKAELRAERLTDQPERQSTSIPPLDVPRPPVPPALLDALADKT
AMVAFGSGASAQAGLPTSHELILRLVDRFDTQISDRLRQNIQYATSANEEGVVEPDRFSAIVEALSDQVS
RPALIEAVQDIFADMRRNTGFYETLSRIGWSGALSLVWDDMADENFLAANPPFLRLNPEDTDEMRQAIKA
GEKLLLRGWGGLTEASGENIVLTFEEFRKLLEERPEFGRQLTLLLQTRTFLFLGLSPISLREYLTALNPY
LEVTQGRHFALVPASYENELFVRPLEQYGIELLEYDPAGDHAQVKNFIDDLLQQARNLGQYRQPEEDRAN
PLAWQPLTRLELENIGPFNTLEIDLPTGRIPNDTAEVHGEPWTIITGENGMGKTVILRAIALVLSASDPL
VAARAGSLLKLGKQSGRVTLSVGTRKIEVRLVRDRKVIVTSRQISPLAAGQFLVLGFPALRGAPSGEPAG
PRELDEQPPGPQDVYPLVLGSVDDRMLNLKQWIVNVLSAARGGDAKNRRLAETLDSIVSQIMPGGVVGFA
PLSEANVLKLSIRTPGDGGVEREVPFEQLSQGMSAIFNWVGVLLQRLHDISGEDEDPSKVAATVIVDEID
VHLHPEWQRRVVTLVKDIFPNVQVIASTHSALIVSSVTADEVRIFRRIDDGEFQLVRPTRETYGRSATDL
MQGEALGVQNARTVDFDEKVVEYLDLRKLASRNPDQEDRYQDLRSELQDANWAGISEEPAPVVTAEDIQR
LSQKYF
>gi|56708912|ref|YP_164957.1| hypothetical protein SPOA0125 [Ruegeria pomeroyi DSS-3]
MHRLDPNYTSEALKKLIEIGQEKAKELIDAFEEDPASVEVGTFYTKFKDDLIACQNGNCAYCEQLVSGHP
GDVEHYRPKNRVTLDSGKVLTIKHPKHGEMNHPGYFWRAYSWDNLFLSCGDCNKARYHSDQDGRTKFGKQ
DRFDILGKRAVDPCDDLNDELPLLVHPVDGDPQKDLTLDGENLYQAHNDRGQYTIDLLGLNRRADLIERR
SVALERGQLVVWEFLDAVKNEKAKKQMEKAELLQKIIDGSIEFLSAYRLGLFGELKKLDDLGVDLKIGEL
VQKVLKTGGDPSADAPR
>gi|56708913|ref|YP_164958.1| short chain dehydrogenase/reductase family oxidoreductase [Ruegeria pomeroyi DSS-3]
MSKRTTLITGGNSGIGAAIGQALLERGEAVVSLGLEMPEDRHNDLHGYTADLTDADATAEVALRICKDHQ
IDALVHNAGLILPNLLEDADPADVLTLAQLHLAAPMALTQAALPGMVERGAGRVVFISSRSLQGMPTRSA
YSATKAGINGLARTWALELAPKGITVNVIAPGPVLTDNFWAIVPKDGEQQQKIANGIPVRRIGTSDDIAN
AALFFLDDKAGFVTGQVLFVCGGTSLAGLSG
>gi|56708914|ref|YP_164959.1| cyclase family protein [Ruegeria pomeroyi DSS-3]
MTQTPLAALSQALITGGVECIDLTNTLSPDFPVIVLPAEFGQCAPFRMEKVSRYDDNGPAWYWNNISMNE
HTGTHFDAPAHWVTGKDLPSNTVDAVPVQDFVAPAVVIDISDEAAADEDFVVTRAFLEDWEARHGKIPDR
HWIALRTDWYKRVGTPDYLNLKEDGAHSPGPDGGAMDFLVHQRNCIGLAVETVGTDAGQAFHFDPPLPAH
SILHGNGRYGLQCLTNLDKLPTFGALIVACPLKIEGGSGSPLRVIALVERAQA
>gi|56708915|ref|YP_164960.1| short chain dehydrogenase/reductase family oxidoreductase [Ruegeria pomeroyi DSS-3]
MTDPLQRPRRKDPLRRTTLGHVPPRLRSRAAMEMATHAAQGRFVLQTCESCDRATYPPRDRCPNCWGELV
WREQDAGGQVAAETTIRHSTDTYFRNHMPWRIGTVRLDAGPTAIVHLHGEAGVGDRVNMVLKLDRGGNPA
LFAMPRGDVPNMQDDPQFRSFTADPKHRRVLVTDGRTDTGQAIARALLDAGAAKVFVGDCAPLMRFAGKQ
QLAALDGAELVPLDVTDTHSVGNLAAQLGGRIDIVINTAGQVREGGVAFGAKLSDLQAGLDTGVVGLMRL
AQAFGPALGARSDDGVNSAAAFLDVVPVSGLSGQSGYSGTAASAAARLSLLSGFRGEMQKAGIRVMSVLT
GPVDDAWHQRLPQPKTAPSHLARTVVAALRDGQEISCAGDVAKDLFARWRADPLLTMREENR
>gi|56708916|ref|YP_164961.1| hypothetical protein SPOA0129 [Ruegeria pomeroyi DSS-3]
MGMQARYDGVAVCAPITVPYVRFSPESAHWWTGAALRALGQKTGLNAGDIDGFCFASFSSAPDTVVGMVQ
HLGLSPRWMDHIPTGGASGIMALRRAARAVQCGDAEVVACVAADTNQIDSYRQTLAGFSRFSQDATYPYG
FGGPNATFALITDNFMRQFGTTRETFGKLCVAQRENALSNPLALMKKPLTIEHYMNARPISDPVHLFDCV
MPCAGAEAFLVTTPDKAEQLGLSTARILSTIERHNAFADDTVQFRGGWERDQEALWDRAGCGPGDVQCVQ
VYDDYPVIVAMQLADLGFCSKPGLNDFIAANEFTISGSLPLNTNGGQLSAGQAGAAGGFQNVTEGLRQIL
QCPLGEQVSDAHRALVSGFGLVNYDRGTCTGAAVLQREALR
>gi|56708917|ref|YP_164962.1| AMP-binding enzyme family protein [Ruegeria pomeroyi DSS-3]
MRRMNKTVFGRFTETAHRRGDAPFLHVLEETAVIYGIPAGDISYGEMGARIADWADRLSLAGFGHGHRVG
LLLQNRPVFLEIWLALNSLGASVVPINPDLRLAELEYMVAHSEMALAIVLPERHQEMSEAVANAGSEALV
ITSDTDIPPAPAPSTPTVDLGPETECALLYTSGTTGRPKGCILTNEYFLHSGDWYAETGGYISLRRDAER
MLTPLPLFHMNAMAVSVMAMITTGGCLTMLDRFHPRSWWEAVRKSGATVVHYLGVMPPMLMGAEPSEADR
DHDVRFGFGAGVDPKLHAAFEERYGFPLIEAWACTETGSGGVISAHEEPRKVGTSCFGRPCDNVAVRVVD
DSGQDVAPGQPGELLVRRAGDNPRYGFCAGYLKNPEATEELWKGGWLNTGDVVLQDEDGSLHFVDRKKNV
IRRSGENIAAVEVESILNRHPDIRISAAAAYSDDLRGDEVAVFLILENGGGDEAKAVEIVTWALGQMAYY
KVPGWIAFVEDLPLTATQKILRGKLKSLLEDTAARSGFIDTRHLKKRQQ
>gi|56708918|ref|YP_164963.1| aromatic 1,2-dioxygenase, beta subunit [Ruegeria pomeroyi DSS-3]
MTPETLIDFVYDEAATLDEMRWEDWLALFHEDGRYWMPLEWQQQDPILQPSLMYEDQLLLTVRVERLSGE
RTFSQKPKSRCHHLLQRPRVLSLGEGDGIFRLRTSFIYTETRGDNLERYSGWVSHKLVEVDGALKIKLKR
VDLINFDAPFGNLQLFI
>gi|56708919|ref|YP_164964.1| aromatic 1,2-dioxygenase, alpha subunit [Ruegeria pomeroyi DSS-3]
MDRYRGNAEAVKNLVRGHAVHRDVYVDKEVFDLEMEQLFPNSWVYVGHESQLKDPGDYITSKIGHQPILI
SRHKNGTIHVLHNRCPHKGVKIASEPCGNTGKFFRCPYHAWSFKTDGSLLAIPLKKGYEGTGFDNDRAKD
GLPRVENVHIYRGFIFARLSDTGLSFEDYFGDSLSTIDNMVDRSPKGEVEIIAAPIRYMHTCNWKMLVDN
QTDTCHPMVAHESSAGTAVSVWEREKHRFTETPMAVQLYAPFMSPYEFYESAGIRVWPNGHGHSGVSGSI
HQDYDDVDGYLEMMVEAYGETRAREILGDIRHNTLYFPNVMVKGPVGILRNFIPVAVDRTLVESWAFRLV
GAPDKIYERALMYNRFINAPTSIVGHDDLEMYERAQEGLLSDANEWINLRRLYEEGEPEDVTEVVNGTSE
RQMRNTFYAWRKFMVQGMEQKQEVSA
>gi|56708920|ref|YP_164965.1| oxidoreductase [Ruegeria pomeroyi DSS-3]
MPSVAAEVIAVSSETRDIKRFILKPQDQGLCTWEAGAHLRVVVSDGSTRAYSLLRLPDLSDDQIALGVLL
EAKSAGGSKFMHALKPGDMVKVSDAANQFPLGGHEEHAVLIAGGIGVTPILSMASDLVAADRSFEMHYAG
RTEGALSFVPELKAICGDALHIHYDDQPSAMNIQAILENTPTGSHVYFCGPSGMIEAVKRTAKELGWSDE
RIHFELFATAADESQNTAFDIEVSDTGQIIHVPADKSIIEALEEAGLDPLYDCQRGDCGICQCDVIEGIP
DHRDVILSDAEKASNTVMQICVSRSKTPKLVLDL
>gi|56708921|ref|YP_164966.1| ISSpo7, transposase [Ruegeria pomeroyi DSS-3]
METLERQRGLRPDHGGPGHRKRRAQDDHDRRDLSQGTPHCVEPVREKGGRGRQIGRTKGGMNTKLHAVAD
AKGRPIGFFMSAGQVSDYTGAAALLGSLPKAGWLLADRGYDADWFREALKDKGIKVCIPGRKSRKKAVKY
DKRRYKRRNRIEIMFGRLKDWRRVATRYDRCAETFFSAIMLAATVLFWL
>gi|56708922|ref|YP_164967.1| hypothetical protein SPOA0136 [Ruegeria pomeroyi DSS-3]
MAEQKNPSKSKSAPADREDRLKAALKANLARRKAQAKARTAQDGADHNKKG
>gi|56708923|ref|YP_164968.1| UDP-N-acetylglucosamine 1-carboxyvinyltransferase [Ruegeria pomeroyi DSS-3]
MDSILVTGNGPLNGQIPIAGAKNACLTLMPATLLSDEPLTLTNAPRLSDIKTMTLLLQSLGAEVSSLQDG
KVLAMSSHDLTSHTADYDIVRKMRASNLVLGPMLARLGQAVVSLPGGCAIGARPMDLHIEALEALGAEIE
LRDGYLHAKAPGGLKGAVHEMRFASVGATENMVMAATLAKGTTVLKNAAREPEIVDLVRCLRAMGAQIEG
EGTSTIEIQGVDRLHGATHQVVTDRIELGTYMLAPAICGGEVELLGGRLDLVGAFVEKLDAAGIDVAETD
KGLKVSRRNGRVSAVNVTTEPFPGFPTDLQAQMMALLCTAEGTSVLEEKIFENRFMHAPELTRMGARIEV
HGGTATVRGVERLKGAPVMATDLRASVSLILAGLAAEGETLVSRVYHLDRGYEHVVQKLEAVGARIERIK
G
>gi|56708924|ref|YP_164969.1| hypothetical protein SPOA0138 [Ruegeria pomeroyi DSS-3]
MSDATFKDGREAPLNLGAEDGDDLKIISTLVQDAVFPITEMSWRPGTRRFALLLNRFRWEDRTAAEQRGR
GYERVQSLLVIDSVLGVASQGIDRSDTDTVLSLLSVTFEPETDGAGQILLTLAGDGAIRLTVEALDVTLK
DVTRPYLAPSRQAPHHSD
>gi|56708925|ref|YP_164970.1| acetyltransferase [Ruegeria pomeroyi DSS-3]
MRRATLFDLFDMSRVLTRSISQLCTADHGGDAEAIARWCANKTPQALRAQMMDEGAEFWLLTRAGQIAAV
GALAEIDQTAGTGRVTLNYVDPACRGQGASAALLAGLEARLSEQGIERGLLTSTATARDFYLSRGWRPDG
PPRRGRWILGHPMAKTLAP
>gi|56708926|ref|YP_164971.1| glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [Ruegeria pomeroyi DSS-3]
MCGVVGVAGVGDAQKEILGMLTNLEYRGYDSSGMAVLSNGRLHVVKRQGALSELKKELAKPSVPLHGSSG
IGHTRWATHGAPSDINAHPHLSSDGKVAIVHNGIIENYKPIKEQLLDDGYVFQSETDSEVIANLAAKLYQ
ECGAGSYRQVLSRLQSRLVGAYAVVIQFADAPDLIGGIRNECPLNYIQNDGQSAISSDLSSLVSYGRDVF
CLKDKQCVILGNEGVEVFDESGAESEAIAITINWSVEKARKDGYDTFLQKEIHEEPAAAQAFCREIRNHR
AALDAYLKQHSFTKIVVVACGSASFSAIFAEALARQFELPVDVISEVGSEMRYNPPIISSTTLVLAISQS
GETADTIGAVKAAKQKGAQVVAFVNVAGSTLEFVSDLVLPLSAGPEISVPSTKTVTNMFLAVYFFLDAMR
QALSGARDESWFTSAEDFRAALAEMVGREREFRSIADRISGYQSCFAIGRGVDFSIAKETALKFKETSYL
HCEAMNAGEFKHGSISLIEYGMPVLCILTDQAQRKKMVSNINEVRARGAQCIVISDLQPTEIEDAEAMTV
ITVPAVGPVWNTILTLVVAHYISFLIGTLRGIDVDRPRNLAKSVTVE
>gi|56708927|ref|YP_164972.1| hypothetical protein SPOA0141 [Ruegeria pomeroyi DSS-3]
MHITKFAEGGQFEPRKIAAALRTSAEEVAMTVGLGKDALQRRARINSDKTQRRLRELVEVLNKVEPRFGS
ELMAYAWYRSEPLPGFDGRTAMQLVQEGKVQQVLDYVDAVDAGVFA
>gi|56708928|ref|YP_164973.1| hypothetical protein SPOA0142 [Ruegeria pomeroyi DSS-3]
MPLRHGRYRGPLYRALNPVYAREPLSGRGAERYGGRFNARGIPALYTALDPASALREANQVGSLQPTILV
SYRADLGPVFDSRDTGELEQRGVSARMLADPGWRQAMLDGREVPTQDFARGLVADGYVGLLVQSHAKGAS
DSDLNIVLWRWAGDGCTLGVIDEENRLGRM
>gi|56708929|ref|YP_164974.1| IclR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MATEKRKRGRPKSFADKSEQNTNQSLDRAIDILECLASARGLALSEVAERLDLAPATVYRALHTFESRRL
TEIDPETQTWHIGPDLFRLGSAFLLRSSLVERARPVLRKLMEVTGETANIGIERDGEILFLSQVETQSNI
RAFFQPGTRAPLHASGIGKALLSQYDRARIDRLLPEMRLEQFTMKTRFDKEQLLSELDLIHRRGWALDDE
ERTHGMRCVAAPITDFTGEAIGGISVSGPSDRMPDARLTEIGNIVRDAALDLSRRLGAPLSVSIRPSTDE
A
>gi|56708930|ref|YP_164975.1| serine--glyoxylate transaminase, putative [Ruegeria pomeroyi DSS-3]
MSFQNPVFIPGPTNIPESLRKACDMPTIDHRSPLFGQILHPARAGVRAVLKSETAEIFIFPSTGTGGWET
ALTNTLSAGDGVLAARNGMFSHRWIDMCQRHGLAVEVVETPWGEGLPADRYEEILAADTHHRIKAVLATH
NETATGVRSDIAAVRRALDKAGHPALLFVDGVSSIGSMDFRFDEWRVDVAVTGSQKGFMLPAGLAIVGFS
AKAMEATATGTLPRTFFDVHDMARGYANNAYPYTPAVGLMNGLNQACRMLLDEGLENVFARHHRIAEGVR
AAVHAWGLELCAASPDLYSDTVSAIRTPEGFNATDIVTHAASKYGVAFGVGLGEVAGKVFRIGHLGSLTD
VMTLSGIATAEMCMADLGLDIGLGSGVAAAQEYFRSHSATSLLAAA
>gi|56708931|ref|YP_164976.1| pyridoxal-phosphate dependent enzyme [Ruegeria pomeroyi DSS-3]
MYIPTFEDMLAAHARIEPHIRRTPVRVSDYLNELTGAQLFFKCENFQEPGAFKIRGATNAVFGLDDAQAA
KGVATHSSGNHASCLSYAAMLRGIPCNVVMPSTAPQAKKDTVRRYGGVITECAPSTSAREETFARVQAQT
GGDFVHPYNDPRVIAGQGTCARELMEQTDGLDIVVAPIGGGGMISGTCLTLSTLAPETRVIAAEPEQADD
AYRSFKAGHIIADDAPKTIADGLLVPLKDLTWHFVSNHVAEIYTASEQEIIEAMKLTWKHLRVVMEPSSA
VPLATILKNRKAFAGKRVGVIITGGNVDLDKLPWMNG
>gi|56708932|ref|YP_164977.1| threonine aldolase, low-specificity [Ruegeria pomeroyi DSS-3]
MKDMTNLDNFEVGFDIPAKPGMDAAEIQTPCLVLDLDALERNVKKMGDYAKAHGMRHRVHGKMHKSVDVA
KLQERLGGAVGVCCQKVSEAEVFVRGGIKDVLVSNQVRDPLKIDRLAQLPKLGSRIIVCVDDLANVADLS
AAALRHGTELEVLIEIDCGAGRCGVGTTQDVVAIARAVDAAENLKFTGIQAYQGAMQHLDKYEDRKAKLD
IAIEMVESAVQGLKAVGLDPELVSGGGTGSYYFEANSGVYNELQCGSYAFMDADYGRILDQNGQRIDKGE
WENAMFILTQVMSHAKADKAIVDAGLKAQSVDSGLPFVHGRDDVEYIKCSDEHGVVADPNGVLKVGDKLR
LVPGHCDPTANVHDWYVGVRGGKVECVWPVSARGKAY
>gi|56708933|ref|YP_164978.1| ornithine cyclodeaminase/mu-crystallin family protein [Ruegeria pomeroyi DSS-3]
MAAGTARNFPVIREAIGHADALYGFKSGFDRQALNLGLKSGGYWPGNADKGLTNHQSTVFLFDADTGRCQ
AVVGGNLLTALRTAAASSVSIKHLARQDAKVIGMIGAGHQAKFQLRAALEQRNFEKVIGWNLHPEMLVNL
QEVADEAGLPFEAVELDGMREADVIITITSSFDAILKADQVSPGTHIACMGTDTKGKQEVDPQLLVMADV
FTDEVAQSISIGEAQHAVAHGLIQAADVAQIGAVINGTNPGRTSDAQITLFDGTGVGLQDLAVAATVVER
ARAAGAGTEIAF
>gi|56708934|ref|YP_164979.1| major facilitator transporter [Ruegeria pomeroyi DSS-3]
MRDHVSRAILASALFAATYAVNLQAPLYAVYAGNSGVGAAAVTVAFAAYVAGLMPTLILLGGLSDRIGRR
LPIALALCLGAAGTALLAVVPTWPSLVLARLLLGVSTGLATTAGTAYMAELFGADRTRQATLLVTSATSL
GFGGGALATGLCLSLGGPSVMPASFVALFVAAPLLALAVLGLPRADTPHPVALLRLPVFPAGSWQFGAAL
ALAWSATGMTIAVVPLQLAAQGLGAYTGMVIFLAIFVGFLSQPLARRLGNRVALSVGFVLVPTGFVTLLL
GVWTQSIGLVLAGTAITSAASYGFTYLASLAEFALRAPDNRARAAAGLFVYAYVGFSLPTIGSGALADRF
GLLPAMTVFAALLVTLTWAVAWRGAKVAELRQPAQ
>gi|56708935|ref|YP_164980.1| GntR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MKYSKLVETLAARIKAGEIRPGTRLKTHRAFAEEHGVALATATRVYNTLKQRGLIVGEGGRGMFVRQPEV
PPTLGIEQPEEAPGIDLVFNMPGDPGDGEVLRAGLRGLAGRGDLNALLRYQPHGGVLAERRVIANYLSPR
LGKIEPERLFITSGAQHGLSVVAFGLLKRGDGIATDPLTYPGFRAVVGLRDLELHPVPGQLGSMDPLALL
RVCAKTRLRALYLMPSVHNPLGTVMDEYSRRAIVAIARHHDLLIFEDGAYDFLETDPPPSFLELAPERTV
YIGGVSKVLATGLRLGYVVVPPDLAGALSMAIRATTWNTPALITALVTQWIEDGTIGHFEQTRRAAGARA
QAICRACLGHHDFSAHRNAGFAWVPLPGRLRAEEVVARLANRGIAVSTAKPYAVGPTTPNALRLAFGGLN
DALLRSSLTTISTVLDMA
>gi|56708936|ref|YP_164981.1| AraC family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MNRATLSMQNTHAPVTPCGWLVAALLEAGVPLAEIEAWLGQRLPPDHRDRTVLPSEQYFRLFEWGAGVTA
NPDLGIQIAAHLTSRDFGLLGYLLENSDSLGTWLHHLTTYNAVFSQDAEISVMRAQGSVVVGYSPVPVAG
FTPLQDIWSSIGMIVHAIRVATRCDWYPARCRFSTPCPADTSALEALLGPELHFDHKTNQIELPVRDLDL
AIPGADPVLLEILKRQADGIVATLRQQEEIVSRLRLMITAHLAEGGFDTVRAARALNMSVRKLHRTLAER
GTSFRNLRNEVLGETARAHLADPGIQITEIAHRLGFSETSAFTRAFKALEGMTPRDFRARSLGKT
>gi|56708937|ref|YP_164982.1| cytochrome c family protein [Ruegeria pomeroyi DSS-3]
MIFRAFSVLVLPVALLAASAADADGAALYAESCAGCHGETGQGNGELRAPALAALDAGYLIRQVGHFRSG
VRQVNPDNDMAVAMVELLPDVSEADTAEIASYLASLPLPVLEDDNDPPGFRSRGLYSGCISCHGARAQGI
EALNAPRLARQYGWYLAEQLDAFRVGRRGAHPEDDPGRQMKAMADAIGSEADIAALVSYIATLDP
>gi|56708938|ref|YP_164983.1| di-haem cytochrome c peroxidase family protein [Ruegeria pomeroyi DSS-3]
MADEITLAETCPPSFQLLADGTCELVTLYQFYDSPPQHGGLRARLDPPANRYTPQQIDLGRYLFFDPILS
SGGDLSCASCHDPAQGLSDGRKRGLGVTELNRSTPSLWNVGFASSLMWDGRAETLEQQALLPLFNPAEMA
ANADGIETALNAAPGYVSLFQTAFGKSPSLETTAIALAAFQSSLISLNSRYDRYAHGDATALNPQEIRGM
NAFRGFVARCSQCHIPPLFTDFELAVVGAPADERGFADPGAGALAADPARLGAFKTPTLRNITRTAPYFH
AGQFDTLKGVVDFYNNTAGHAAPEGQDLRIHWHVHMTDGPKLSAGTVADIVAFLGALEDESLMPRRPDTL
PSGLLPQD
>gi|56708939|ref|YP_164984.1| hypothetical protein SPOA0153 [Ruegeria pomeroyi DSS-3]
MTGYGKTFALLGTCATLLGPPLSAQTGSVLSDLQNEEVQARYRAAAAERIACPRIEGDAALMAAFAKDAA
SKWDRAAMGCATEYGARAMEALSLPTNLIWAVATFRTDNIETHLQVLGAHLDYFEVLDKSYSAHYQGIEM
ATELGLRWEQARERSETLMTRIDPLVPKLTEARLLRAAYLLASTLRETPPEVQNTAVAAALEDLQIAIAE
NPEALDGLGPLLLGQVLAVLPEFLGGDILAAIDLLEQAHALNPTDLSVHHTLVEAYLGERETDKALALLR
HAASIDPSTENPQDYADEMKYLGGLALRAGAPDLARQMAGHRSAILAAHPQLDPRKEMAALGHGGADPLT
GKKPDDLN
>gi|56708940|ref|YP_164985.1| hypothetical protein SPOA0154 [Ruegeria pomeroyi DSS-3]
MKNTGILRGAVIASLLGSTAMAAELTVPSGGDIQAIVDLAAPGDTILVEPGAYHQSVYVDKPHITLRGLR
KGDAWALLDGEMKLNDGIIASGHSIVIDGFKVTGYKGNGIMTQGANNFEISNNYVEGAFYGIFPQFGRNG
LVVGNTVTGAEDAGIYVGMSDNVDVIDNVAFGNVMGIEFENTRNALMAGNHVYDNAAGITLTLVPGLPVK
DAHSQVIRDNRIIGNNHENFAPASSIAAGVPSGTGILVVGPDNITIVDNEIADNDNVGVFVADLITFGMD
SDPKLDPYSDGVRVLGNTWRNNGENMNGMLADMLTATGRTGIEVLAMGKGRDSCVLPADGVDTLGTNRWQ
DCADENSAALVTARIEGGADEPVYTREQKGRLTYLAVCTGCHAYDSVLHGPSVQSIQALYDGDPSGMVNY
ISNPVRKRDGFPEMPPQTYLGEETLDAIARYILEELGQ
>gi|56708941|ref|YP_164986.1| type I secretion target repeat-containing protein [Ruegeria pomeroyi DSS-3]
MTIETVLSHTTFTGYTAAQRTILENALRDMYANSATGKILLDKVTAALPLDIKFVAGEAQAFRGTGRVEL
DFAAVANLAYFDANGKGVAVEIEHVLRHELVHALQGIGDSPRGTTSTDSAKGPTLVFEKAINDEMSKSNR
LSYEGVDSDTAIIPGTDYTGGAAIDLALARSGNEDTSGNNPATNDLLWGRGNGSNYFKSGNGTDYLYGNG
GNDVLEGGGGNDSVNGGTGTDRAVFSGNCSDYTITSNANGTITIADNRANSPDGTDTLKDVEYARFADGE
MNLTTGEFACPGQNVVIVIDKTGSMSNDIAAAKAAAIEIANALFGTTEKPVASTLAIVTYWDSNTVTNLS
FTKHDSVADRKAAALAALNNLSTSTSGMTENLNTALLHAINGNAGTWDTRNKSNKIIVFTDEDADDPHLR
AEVVSKALAADIAVPPPPVGNAVPLQSAIEQVQGTNFVDYTDTPFSDPYGAAPLQILPVVIGNSSTANSD
LESLADQTNGQVFNASTSDPSQAAQNVIAAINASSGTDGDDSLTGDDNPNSIGGLAGNDTISGAGGNDTL
SGGPGDDVLNGGAGDDSLRGNAGYDTVDGGADTDTVVVNANSTDVNIIGSSDPITIQSPDGDVVISNVEF
VRFLDRTMAVSTLATLTTVNTFGGRGDDSMDGDANGNRLWGREGNDTVNGNGGNDTLNGGLGNDAVNGGE
GADQLSGGGGNDTLDGGDGTDTAVFDLTSASASVDGPDDALRVDTGQGIVTLRNIEFVRFTDRTFNLTDL
QALRDQTLIGTPGNDTLRGSYGNDTILGLDGDDELDGGLDNDVLNSGEGQDTLLGGPGDDLLRVTQTIAP
TVVDNTVSNPVSNPMTLPENWSLDAFGDVADPTTVPHQTLAITGSDETQEAFRFTATAGQIWTFDIDGAD
FDTVLALYDNNGTQITSNDDSSTSNGAGGSTSGRDSFIQHTFAADGTYIIALQRYGGGTISSTQMATLNI
SATGVTVPPVTTTDANLLDGGADNDTLEGGGGDDTLIGGLGDDSMTGGAGSDTAILATSQQFVSGQNVTG
GVQLTSSQGVDFLGSDIEFVQFNDGTLTLAQAAALAGTVPSAINGTNAGEAVDGTTATEIINGLEGADWI
SPGGGSDTVDGGPGNDMLSFFNLPDTPGRTNLDYRLTIDMGAGTAVSHDGAERIQFANIERLTGTIFADH
ITGSSSDDYIRGLGDYDWIVATEGADTIDGGNGQDMISFLEWQNTDPNTISDAFTPNGAPPTGAQATGVL
VNLANPTQNTNLASGLTLVSVERVTGSARQDVFYGDDGQNDFRGLGDFDWFVSSDGGRERYYGGDGVDTV
TYFNAPGAVTANLRNGAVVNGNESGYGTQGWAARDLYFEIENLVGSNFGDHLTGSADRNQLSGLDGDDFL
FGFGNIDYLKGGAGNDTIDGGGSSDYALFDGDLVDYTLTRTAENRVTVVGPDGNDSLIDVEYFRFDDQDV
RIWDLPLV
>gi|56708942|ref|YP_164987.1| hypothetical protein SPOA0156 [Ruegeria pomeroyi DSS-3]
MAGEAKGMIGPRLLSGLVLVLGFLGTELVAKGECNEDGGWKMTVSAASGDILNSVSNQREADENTLALAG
QHRDLLEAALTAAGQRGASADIFVVTAPAFTDATAGPVSWPPAGAQLASPWLTMSRTGTGRLTLTLFVSD
LRVIADGALQARGAAPADYRTGPGWRSMTFSCLAQAAESYVSHVSASQPPESWVAGQECVPPTFAGPMAW
LFRSAPQNFFAPFDMTVMKRIEAARGSSTAFYEALYRALIRHGVALLASEAGSGDAWWHDALREVTE
>gi|56708943|ref|YP_164988.1| putative sulfite exporter, CuyZ [Ruegeria pomeroyi DSS-3]
MVSALKSRWDTHFGGILLVCVVAAAATFLSEHYGAPAMLFALLIGMAFHFLHRDAAFAPGLDFSAKTLLR
FGVGLLGLRLSIGDVESIGYGAVGAVGGFVLATLACGAMLSYLFGRRMAFGLLAGGSVAICGASAALAIA
SVLPARADREQDTLFVVIGVTALSTIAMIAYPILFASLGMSDLQSGFLIGATIHDVAQVVGAGYSISDEA
GVIATFVKMVRVALLPVVMLVVMFSFRGAQSQRVTLPWFLVMFIVLAVLANAGVVPQVVIDAIGTLSRWC
LVIAISALGVKTSLATIAHVKPSYGVILVVETLFLLAIAIGFVLLGGV
>gi|56708944|ref|YP_164989.1| D-cysteine desulfhydrase [Ruegeria pomeroyi DSS-3]
MHLARYPRRFIAHLPTPLERLDRLTAELGGPEIWIKRDDCTGLSTGGNKTRKLEFLMAEAELQGADMVMT
QGATQSNHARQTAAFAAKLGMDCHILLEDRTGSNNANYNNNGNVLLDHLHGATTEKRPGSGLDMNAEMEK
VAEKFRADGRKVYTIPGGGSNPTGALGYVNCAFEMLNQFNERGLKVDHIVHATGSAGTQAGLITGLQAMN
AQIPLLGIGVRAPKPKQEENVYNLACATAEKLGCPGVVAREDVVANTDYVGEGYGIPTESGLEAIRMFAE
LEAILLDPVYSAKGAAGFIDLIRKGHFKKGERVVFLHTGGAVALFGYDNAFDYSGRWVA
>gi|56708945|ref|YP_164990.1| transcriptional regulator CuyR [Ruegeria pomeroyi DSS-3]
MQLDWIDDILAVIDTGSLAAAAERRLLTQPAFTRRVRGIEERIGAALFDRSRKPVAVLPGVLALEPDLRE
LSGRLRRLQQDLRVSAEDARRGVTLVCQHAITTTISPRIVRDLTASQDISVRVRSGNRDECLMLLLSGEA
DFAVAYEVPGERDPMLPQAFDRAELETDLLVPVHAPGLEAAGARTAMPVIGYPPDVFLGQVFDRFVAPRL
PAGFTYEVRAETALTLAACEYALGGIGVAWLPLTLVAPHLAAGRLCRADGLPEQPLTVTLMRLSGASARR
GDRSWLMLCGQPGVSSGPKD
>gi|56708946|ref|YP_164991.1| TRAP dicarboxylate transporter, DctM subunit [Ruegeria pomeroyi DSS-3]
MESSFVLLFMFTSLVAFMLSGAGLAFVLGAIAFISTILLWGPAALIVAVLNTFETMTSEALMAIPLYVLM
ASILQKSAIIDALYDAMETWFSRLNGGLAVGTIAICTILAAMTGVVGAAVAAMGILALPSMLSRGYHPPL
ALGAICAGGTLGILIPPSVVTIVYAITAQISIGQMFAAGIVPGLMLAGSYMAYVLVRTWFNPALAPKPVH
LKPIPLAVKLGKLKSLILPALVVIGVLGSIYAGIATPTEAAAVGVLGAMLSALVTGKLRLSVLSDAATDT
LRVTAMILWITIGARAFISVFVATGGADSILTFVETLEASRWVVLGAMVLILIFLGLFLDEIGIILLCVP
VFLPIVDTLGFDPLWFGVLFMITAQMAYITPPFGYTLFYLKGVLPEGIGIGQVYRGVIPFFLIQVAILIL
FALFPALVTWLPELLTQNAR
>gi|56708947|ref|YP_164992.1| TRAP dicarboxylate transporter, DctQ subunit [Ruegeria pomeroyi DSS-3]
MTSLARRITALNHNLFMCARWLVFIIALMMLWEVLSRYFLEHPTSWAPEFATLIFGPFFLLGGPYLLHLG
GHVAVDVLSARAQGRLATGLRLAGLVLAAAFGIILLWFSLPLVLQSYQYGETSYSAWNPVLWPAKAFLPL
SALLLVLQAIADAIDIFAEEIHA
>gi|56708948|ref|YP_164993.1| TRAP dicarboxylate family transporter DctP subunit [Ruegeria pomeroyi DSS-3]
MTNLNRRNALQLGAVALAAPAILTGGAARAQGVTQWRMQALWGGGTTPMLYEEKFCARVLELTGGTLEIT
PFSGGQIVPPAQAFDAVRGGAFQMMKTFDGYTAGKIPAHGFSSTVPFGFPEPDQYEAWFYERGGLDLARE
SYAAAGLTYVAPTVYGEEPIHSKVEIREIADLKGLKGRFVGLASAVMADFGVAVSPLPTSEVYSALDKGL
IDVADRGDIKANYEEGIHEVAKYLILPGVHQPTTATSYIANTGAYEALDNQQKAALAVAAREVSGALRQD
ILVSNGEYLRKFADAGVEIIDFDPADVVQGRERAVESWAKAATDDLSKRMMESQMALMQELRLL
>gi|56708949|ref|YP_164994.1| hydroxymethylglutaryl-CoA reductase, degradative [Ruegeria pomeroyi DSS-3]
MTGKTGHIDGLNSRIEKMRDLDPAQRLVRVAEAAGLEPEAISALAGNGALPLSLANGMIENVIGKFELPL
GVATNFTVNGRDYLIPMAVEEPSVVAAASYMARIARENGGFTAHGTAPLMRAQIQVVGLGDPEGARQRLL
AHKAAFMEAADAVDPVLVGLGGGCRDIEVHVFRDTPVGAMVVLHLIVDVRDAMGANTVNTMAERLAPEVE
RIAGGTVRLRILSNLADLRLVRARVELAPETLTTQGYDGADVARGMVEACALAIVDPYRAATHNKGIMNG
IDPVVVATGNDWRAIEAGAHAYAARTGHYTSLTRWELANDGRLVGTIELPLALGLVGGATKTHPTARAAL
ALMQVETATELAQVTAAVGLAQNMAAIRALATEGIQRGHMTLHARNIAIMAGATGADIDRVTRVIVEAGD
VSVARAKQVLENT
>gi|56708950|ref|YP_164995.1| GntR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MKKIDRVIESIQSRITEGRLKPGQKLPSIRQAVDEFGVSKNTVIEAYERLSARGLIRSVHGAGFFVCAST
PAPLSKATQPAHIVEAVDRLTLLTAQLDQEKLPVRVGDGRPPQSWMNDALPLRMKGNIFKNFVGDPSGYG
GVSGHLQLRELIAARSNRADMSVHPDQIVTTFGANHALDLIIRRYLEPGDVVLVDDPGYYPLLGKFKLAK
IRAIGVPRTPTGPDLDVMETLAAAHGPKMFFTQSTCQNPTGSSMSLPVAHGVLQVAQRFGLMVIDNDPFT
DLPGNAGVPLSALDAFNSVIAISSFSKLLSASFRVGYVIARPEVARELTELKLLTVVNSSRFSEMVIAEL
IKSQRYGRHLNKLVNRLEEARRDYHRKVRKLGLDVFCAQETGYYSFLQLPHTVDEGQLVRKASAAGIMLA
PGRLFAVDENPARPALRINVTRADDPRFYRFLKRQVIDGQV
>gi|56708951|ref|YP_164996.1| LysR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MNLQQLAVFREVMETGSVSAAARNLGRTQPAVSASLKALEVNLGIALFEREGRRLVPVPEAHYLLSEAAE
ILARVNTTEMNLVGMRNRTRGSLSVVGMPGPSVYLLPDFVSRFGSKADDLKISLSTRSSPQILNLIAAQA
FDVGFCDLGFCDMSAEDLNSSLYHTKTIMSDCLCALPAQHPLAGRAVIDARQLSGERMGVLAGTHSTNRD
TRAAFEQAGAVFNPRVEAQYFIPLLRFVEAGQICTVLDPLSAETYKRMNGGEVGIWFARFLPSVRFGYSI
VTPKQRPLSLLAQDFVDGWSDHVREIIADHS
>gi|56708952|ref|YP_164997.1| TRAP transporter solute receptor TAXI family protein [Ruegeria pomeroyi DSS-3]
MGLQKYFIGAALATLVSAGSVAAQDPTFFRIGTGSAGGTYFPIGGTIANGISAPPGSRPCEEGGQCGVPG
LIAIAQSTTASVYNNTAVQNGELEAGLAAADVTRDMYLGEGKFEGKIHEKLRVIANLYPEDLHLVLPKGV
TINNLGDLKGKRVGIGQAGSGTQVAVLQMLENWGVTRDNIEEAELNLAQSSERLADGQLDAYFYAAGWPV
AAVVQLASTKGLELHSFTEEDMKVINDIIPAYIPSKIPAGVYEGLDYVVNTPAVSALLVVSSDLSEELVY
GITKAMWNDNTRNLLDNGHAKGKLITLETALGGMDNLGVPLHPGAERFYREAGLLK
>gi|56708953|ref|YP_164998.1| TRAP transporter, 4TM/12TM fusion protein [Ruegeria pomeroyi DSS-3]
MTDATSQKTDTLTAEELAAIEEKYDESAATRPVSPGFARFLKVVALSFATYHYLTAGFALPTDHWHMGWH
LSGLFILTYALFPAIRTRGTYDLKTGLMHYGGVPYLDILLMGLGVASALYLGFAWRGVPWLGIEEQTFRM
GNPNGYDMLFGSILIVLVLDIARRTLGWVLPAIICVFMAYALFGPVFPGILQHPGVKIRTFVSSMYFPQE
GIFGVTLWVVSTIVFHFVLFGVIAQRTGLGQLFIDNATILAGRYTGGPAKVSVVSSAFFGTISGSSVANT
VSTGALTIPNMKRLGYPGHFAGGVEAAASAGGQITPPIMGAAAFIMAEFLEVPYTTIVIAAIFPALLHYV
GVFSVVHLMARRLNLQGLSKEMLPRLGAVWREGWANMVPLVGLLVVLFSGYTPYMSAFCGISLAIVTGMA
RRSAPVTLAYPAAFIAFVVWKCTGGGFDLPMSALLVALTLLGSLNPQERIRLPQMAETFETGVKYALAVG
AAAAAVGIVVGVINTTGVGFRVGFMVTQSAGELGASLHSLLSFGRFELFSVTDITLFISLIFIAVACILM
GAGIPTTALYIMLVSVAQPALAQLGVPPIASHMFVLYYGVVAEITPPVCTSAYAAAAIANSNPFRTGISA
FTLGLGKIVAPMAFVYAPVLLIVSQTGFDLWTFSYTATSCILGVICLSVAVVGYWLAPMGALFRVLLAMA
GLVFIAPSLQADLIAALIAAPAVLSQIVLRRRTTEAG
>gi|56708954|ref|YP_164999.1| oxidoreductase, FAD-binding [Ruegeria pomeroyi DSS-3]
MSEEITVLGAGIVGICTALSLIERGLKVTLIDRDAPGQATSFGNAGVISPWSVIPQSMPGMWKKVPGMML
DPVGPLAVSPTYLPRLAPWGMRFLAEGREARVRAVSAAMEFLNRDCIDLYRRHLKGTGHEGLIRDSYYVH
AYRDASAARLDTLDTELRRRAGAEVERIDAADLRALEPALSPDFTAAVLIKGQARALSPGQLGAVLADKF
QQLGGRLRQTSVQSLHRQDDGGWLCRTDQGDLKAAKIVLAMGVWSARLLSPLGVHIPLEAERGYHVTFTK
PGITLNHSVMDAEMKFVASSMTDGLRVAGTAEFAGLDAALNKRRLDGLVRLACRLSPDLTAEPHATWSGQ
RPSLPDSLPCIGEVEGLPGLVAAFGHSHYGLMMAPKTGELVADIVTGRMANTDLSPYKATRFKRFWPVSN
T
>gi|56708955|ref|YP_165000.1| MOSC domain-containing protein [Ruegeria pomeroyi DSS-3]
MSRTGPLMTEPTLNARIDGIFLGSVAERWPGRPPSAIGKTAVGGCREINEFGFIGDAQADLDHHGGHDKA
IHHYPSDHYPSWIAEGQIPAEAVPAAFGENIVSVGITETNICIGDRLRLGTAIVEVSQGRQPCWKVSEHT
GNAKMAYLFQKTGRTGWYYRVLEPGQVSPGDQISLIERHHPEWTVETVTRARLTRRITSKDAAALAELVV
LAEGWRSAFARMAAGETHEDTDARLIG
>gi|56708956|ref|YP_165001.1| MarR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MSKEYHIRELIMRLARLDVSESWAEDLNPAQRAVLEYLSRANKFSRSPSHVAAFLGTTRGTISQTFKALL
QKNYVTEKRSQSDKRVISFDLTQKGRALLARPRLLISGLESLDSSEQNALLSTLQSTLNSLLEQNKGQPF
GLCKECRHFTSSNGGGYCNLLSEKLAPPETEQICHEQDPL
>gi|56708957|ref|YP_165002.1| hypothetical protein SPOA0171 [Ruegeria pomeroyi DSS-3]
MKTTSGFALAALVLSAASATAGGDHANHAIKQEGAIKSAVDGGKVAAFDILAAHAHRTGNVVTFHMTTNG
KAGENVPAATGAVGGSDVWTYVWPTSLEPSAVGFEEGTGILAMAATSHPDFDDTPLYDENLDGDPANDGV
IWHSHWVVLTPTEECGTGALAVRDIPEGATPKLPATWPGFPIFLDSPGFSPVFDGPEITVKAAFNSDIEL
GGVSYDGVTSALKVNANVHSPLLCVVDVFDVASGNLSLPGKIE
>gi|56708958|ref|YP_165003.1| hypothetical protein SPOA0172 [Ruegeria pomeroyi DSS-3]
MSETWLPTLVTATPQEGFDLAVKLSRIAVKKTQPDAQVRDTLRAVYEKDANALIAVSAVVATHFQTIAAA
NDYWKD
>gi|56708959|ref|YP_165004.1| hypothetical protein SPOA0173 [Ruegeria pomeroyi DSS-3]
MKAPELQIQQWFNSATDLTLADLRGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTVFE
HHEAMTPISLKAFLHEYRIKFPVGVDQPGDGAMPRTMAAYQMRGTPSLLLIDKAGDLRAHHFGDVSELLL
GAEIATLLGEAAPSVQKQAGTPQGDANCDNDGCTV
>gi|56708960|ref|YP_165005.1| MOSC domain-containing protein [Ruegeria pomeroyi DSS-3]
MSWKGIVIGLHIAPRSFLPMKTVPQLELVANVGITGDRYASEDGYYSDRPEEGRQITLFEAETLEALKRD
CGIDLAADEHRRNVTTRHVPLNHLVGQRIRIGDCLLEATRLSTPCRHIEQITGKDIFEPLLHRSGLHARI
LEGGIIRAGDTICPA
>gi|56708961|ref|YP_165006.1| oxidoreductase [Ruegeria pomeroyi DSS-3]
MVKPIHRVTTVIKETRDIAPGVRLLRLSDPDGWDLPPFSPGAHIHIHLPDGLVRPYSLCGDAADRSSYFI
AVQKEPDGRGGSRQVHALQQGERILVSLPKNLLPLTNAPHVILIAGGIGITPFMPMIHEMSRQGRTFELH
YASRQSDAAFLPELEALCAGRMTRYDAERGQRLRLDDVISAIDATGHLYCCGPERMIGELLAKTGHMRDR
VHVEYFGVSADVGQQAYEIRLARSSRTVPVKQGQTMLEALRAADVDVSASCEGGICLECKTRYLEGTPVH
RDITMPKSERDTHLTPCVSGCAGASITLDL
>gi|56708962|ref|YP_165007.1| hypothetical protein SPOA0176 [Ruegeria pomeroyi DSS-3]
MFQAARVRRSPWTCRLVTKATPMTDPAQPILFLLRPDFLDPATGDGAFFCPHCLRLEGLLSIYPVLRHSL
QICYVDFPKPRGALAQLAGAESQSCPQLVLPAGDDELSGRWSVAGAADARRIENTADIEDYLILRYGLSD
RHP
>gi|56708963|ref|YP_165008.1| hydrogen peroxide-inducible genes activator, putative [Ruegeria pomeroyi DSS-3]
MSGLSLRDLEYIQSIAQEGHFGAAAVGCGVSQPAISQQVLKLEARLGFAIFERQGKHVSLTPSGAQFLRK
AEVVLAGARELLDMSVGLSDNLEGELRVGVISTLGPYLLPLVLGSIKSRYPQIRLRLSEEPTTVLEQMLA
DRELDAILIATEPKHQHLETAGLFFEPFALACPADHGRTPGQPVAWADVRGAELVLLSEEHCLRDQTMAQ
QRSAGQIPGKIRRISRVSNG
>gi|56708964|ref|YP_165009.1| cytochrome c family protein [Ruegeria pomeroyi DSS-3]
MKTFMLSGLVIAGLACSAQADGDPEEGKKVFKKCAACHAIEEGKNKVGPSMFGVWERPAGAVEGFKYSQP
MAEAGYTWDEEHLAGFLAAPKKYLPGTKMTFPGVKKEEQLADLLAYLKTLQ
>gi|56708965|ref|YP_165010.1| FNT family protein [Ruegeria pomeroyi DSS-3]
MSYADTVLGFARIARAKAEHLNADPLGFVILTLKAGAYVGAGILLIFSVGQGVDASIRPIVMGASFGIAL
TLVVFAGAELFTGHTMYMMHGVLTGRASIRDLARCWCASWAGNLAGAILLAAIFVIGGGGLILAAGDEAL
LYKVAAKKMHGTAPELFAKAILCNWLVCLALWTSARARDDVTKCVLIFWCLYAFIAAGFEHSVANMTVFS
VALLSNHPDGISIAGAIWNLTWVTLGNTFAGAVIMGFGYWGAASRPSFSDTGIEKSAHGKPE
>gi|56708966|ref|YP_165011.1| hypothetical protein SPOA0182 [Ruegeria pomeroyi DSS-3]
MTRCVLAAPAFFTALALRWGAAESPIQHVLIQMPLLVLAGALLAWNLKARRDWALPLFILALSVFLFWML
PRSVDWALTRAGEVAKLVSLPLLLGVPLRLSWPWLGPVLRGFLQANALSMLGVLGFLYIHAPIRICNSYL
VSDQQDLGVGFLIAAAGLTCLWVCPVLFGQAEQDASPPWSFPGAKDLKS
>gi|56708967|ref|YP_165012.1| SCO1/SenC family protein [Ruegeria pomeroyi DSS-3]
MLRPALASVLAAVIGGGFLWYATDGAQAFTSEAARRLDVARSPRPVPAVRLEDMNDRTIALTPQNGEVVL
VEFIYTVCGDICQIAAGDFAAIRDKLRAQGADVRLISVSFDPLRDTPEQMRIYGENHDADGNIWTVARPA
LDDLEALLTLFGVTVIPDEWGGFQHNAAIHVIDGEGRFSAVFDTDAVAAVVDRVAGEPS
>gi|56708968|ref|YP_165013.1| heme-copper respiratory oxidase family [Ruegeria pomeroyi DSS-3]
MTTAHTPQAGAVKLTMILSGAVFALMMIFGLAMRAAQAQWIELDPAIFYQLLTAHGAGMVGTAALSGAAI
LWYFCGRHLTLSAGIFWAFLGLFLLGVVLILSAIFLGGFGGAWTFLFPLPANSGGAWGPAAAAAFMLGYT
SIGVGFLLYYLELGRRIRARYGNLTRALGWSLILGKADDDVPPPTIIAATSVTIFNSIGIVLGAAVLVAS
LVHLLVPGFEVNALLAKNLIYFFGHVFINASIYMAVTAVYEILPEYTGRPWKSNRVFAIAWNVVLIFVMA
VYWHHLLQDVVMPPWMLVVGQLVSYFSGIPLIAVTAFSTFLYIRGSKMTWDLASSLLVLSVAGWSIGSIP
ASIDGMISVNKVMHNTMWVPGHFHTYLLLGEVAMAFGFMAWLVRGKAISEMVGLDRVAFYTYLAGASGFI
LVFLFSGAASIPRRWAVHYEDWLTHDRIGTAFGALVVMGTLLFVLRFVARLGRSDG
>gi|56708969|ref|YP_165014.1| cytochrome c oxidase,ba3-type, subunit I, putative [Ruegeria pomeroyi DSS-3]
MQSNVLLISLVLMAAMAVVFYVAARASDGPEPGPRANSKRTGLIWAMLVVGVLVSVGTLRPWPHALASTD
DTINVAITSGQWWWEIDTVEIPAGKPVNFSVTTEDVTHGLGIYNADMRLLTQVQAIPGYTTEITYTFDEP
GQYEILCMEYCGIAHHEMVNEFEVVSVEE
>gi|56708970|ref|YP_165015.1| Rrf2 family protein [Ruegeria pomeroyi DSS-3]
MQISKFSDYALRILIHLATSEGGLMSTREIADLQQLPFNHLAKISQWLTHEGYVESVRGRHGGMRLALPP
DAISIGGLLRKSERGTPLVECMKEGGGCCVMTPACGLLPILIEAQEAFFHSLDGSTLQDVLSGNRGMQNL
IRALGVRSKYDPGSAAVQDA
>gi|56708971|ref|YP_165016.1| cytochrome c oxidase, cbb3-type, subunit III [Ruegeria pomeroyi DSS-3]
MSVKEKDPVTGTALTGHEWDGITELDTPVPWAARWALWVSIAIAALFWVFYPSFPLVTDYAKGLVGYSSR
AEVGRVLAEADAQRAMNFAPFANGDIAALAGDTALETRYSDAISKLYADNCSACHRVDLAGQTGFPNLRD
AHWLWSGAPEEIEYTIRHGINAADEDTRVSQMPAFGTDQLLDRQQIEDVTEFVLSLSEGDHNAVAAGRGQ
NVFAENCAGCHGDDGRGGLESGAPDLGDAAWLYGGSRDDIHDSIYRGRQGVMPAWKNRLDDKQIRMLTLY
LLWQADNAGN
>gi|56708972|ref|YP_165017.1| cytochrome c oxidase, cbb3-type, subunit IV [Ruegeria pomeroyi DSS-3]
MTHDAVLVFSKTWGAIYLLVVFVAAVLWTYWPSRRGLYDEAAQSPLQKDEDRPCR
>gi|56708973|ref|YP_165018.1| cytochrome c oxidase, cbb3-type, subunit II [Ruegeria pomeroyi DSS-3]
MSTAHQKLERHSIAFAMMILFVASIGGIVEIAPLFTIENTVEEVEGMRPYTPLELAGRDIYVREGCYACH
SQMIRTLRSDVERYGHYSLAAESMYDHPFQWGSKRTGPDLARIGGKYSDDWHVAHLEDPRALVPGSVMPG
YAFLSATRLDTGHLPAALEALRRAGVPYTDAQIATAEQAAGWQADAEQAYESELQELFGDNVQLRDFDGR
PGELTEMDALVAYLQVLGTLVNFDTLDPEEINR
>gi|56708974|ref|YP_165019.1| cytochrome c oxidase, cbb3-type, subunit I [Ruegeria pomeroyi DSS-3]
MPRKLTFEDLAVLLALSAVMLTGIAILGWGVPTVYVMHGWLIAGAAGWGLIWMINRATDPAQDVPHAYND
KATKFGVVATFIWGVIGFAVGDILAWQLAIPDLNGDMSWSNFGRLRPVHTTAVIFGFGGNALIATSFYVV
QRTSRARLASETLPWLIFWGYNLFMLLSVSGYLAGITQSKEYAEPEWYADLLLVVVWVGYLTLYLRTLAR
RAEPHIYVSNWYYLGFIVVIAMLHIVNNLAVPVSIAYPKSYSLFAGVQDAMTQWWYGHNAVGFLLTAGFL
GMLYYFLPKAVNRPVYSYRMSIIGFWGITFLYLWAGSHHLHYTALPDWVQYLGTSMSIILLVPSWASVFN
GILTINGAWDKVRTDPAVRFMMVAILFYGLTTFEGSFMAIRPVNSLSHYTDWTVGHVHAGALGWVAFITF
GAMYKMVPWIWRRDGIYSERLEAWHFWLALTGTLIYVGAMWNSGMTQALMWQTYDADGALYYSFLDSVLA
MHPYYAARAIGGLLYLIGALIGAYNIYMTISGPKRETTRKSGPLARQPAE
>gi|56708975|ref|YP_165020.1| hypothetical protein SPOA0191 [Ruegeria pomeroyi DSS-3]
MANIDYSRARIISDPAPATIVRWLVAGWRDFCLNRTYSLLYGGGLVLFGWALILLLFRNGLAWALLPMLA
GGVLVGPVVTVGLYRVASGKTRVAAKGQITLVGIILMVFAMAWIRAATILFAIVYGLKPFEGFVATLSLL
LSTSSGWVLLVSGTLVGGLFAALGFAVSAFSLPMLVERDIDGFSAMGLSFNATTQNFRLTVLWGMTIAAL
TALGILTGFLGLVIIFPLLGYATWHAYDDLFRQGGGAKPQPGSEHVRIVGEEV
>gi|56708976|ref|YP_165021.1| hypothetical protein SPOA0192 [Ruegeria pomeroyi DSS-3]
MSGSSLRPHQLFDITRTEIDQVVRRFYAEVRAHDVLGPVFNSAVTDWPEHEDKISGFWAGAILREPGYFG
NPMQVHIANPNIRSEHFPVWLDLFQKVLEQELTGDVASAFSLLAQRIGKGLSMGIENFRQPDGAAPNLT
>gi|56708977|ref|YP_165022.1| cytochrome c-type biogenesis protein CcmE [Ruegeria pomeroyi DSS-3]
MASLKKSRRVRLILFSGVALVSATALIGYAMRDGIQFFRTPTEVATDPPAANEVLRIGGMVEHGSLVRDG
ANFSFRVTDGETSFPISYVGIVPDLFREGEGTIATGSVIGGVFRATEILAKHDEVYMPSELAEMEALRD
>gi|56708978|ref|YP_165023.1| 5-aminolevulinate synthase [Ruegeria pomeroyi DSS-3]
MLNAPDYSSHFEDALQDLRDTGNYRVFQEHNRLVGRFPLSQVMGEDGPRTITVWCSNDYLGMGQHPVVRG
AMKSAIDTYGAGSGGTRNISGNHGPIVALEQELATLHGKEAGLVFGCGYLANLATLATLGRLLPDCVMIS
DELNHASMIQGVLASKAEKRIFRHNDVAHLEEILSELAADRCKVVAFESVYSMDGDIAPIAEIIRVSKKY
GALTYIDEVHAVGMYGATGAGVAEREGLAGQIDIIQGTLAKAYGVIGGYVTANAEIIDAIRSHANGFIFT
SAPPPTVVAGALASVRHLRDSTSERESLHRKAVLLRALLKDARIPFMDAPSHIVPVMVGDPFKCKQLSDL
LLERHAIYVQPINHPTVPKGTERLRITASPLHSDGMIHGLVSALVDCWRDLQIGWATPLGSGR
>gi|56708979|ref|YP_165024.1| hypothetical protein SPOA0195 [Ruegeria pomeroyi DSS-3]
MADIFTLILVTTVFAGILLPLLRPGSDRDLGAGLEDTDPSKQWEAERARLIEQMQDNDIALAEGRIGVVL
YGDTSSRLTAEANRFVDRLRKMRPLVQRPGSPQSRSTGDGISFLSAAAVVVAALGVHFAANVNDLDMTVS
PHATGAIPLAAASDEVRDPVMASLGPDGAPNIAEMVGRLEERVYDGNPTEDDIQMLLRSYRVLERGEDAI
EVLQIAAERFPGNVQFKMMLLRGRLQDPEFDPSEDLVRTVETVLQQEPDLLEAHWYRGLIQARQGRHEAA
RETLMTLRPKLSANPRAAGAVDALLAQLETTTQSDN
>gi|56708980|ref|YP_165025.1| cytochrome c-type biogenesis protein CycL [Ruegeria pomeroyi DSS-3]
MKRLMLILALIVMSFPAGAASVSEDPTEPRVRDLAVLLRCPVCQSENILDSHSSTAREMLVILRERIAEG
MSDAEIFEFFRTRYGDYVLLSPPMTGPGRIVWLVPAGLVLLGLGVFMLILARHKRRAARELKDSVLMSPL
DASGLKGMEL
>gi|56708981|ref|YP_165026.1| thiol:disulfide interchange protein DsbE [Ruegeria pomeroyi DSS-3]
MTIEVDMPRKKGGLEWKLPLLAALVGLPLLLGIGLTRDPNRIPSALVGKSMPAFEIPYLQRAGMLNSAEH
AGKPMLLNFWASWCTTCRVEHPKLVELGVRSQLSDEFSILGINYRDDPARAAGFLNREGHFGYPSGYDER
GRLGIDFGVYGMPETFFIDADGVVQARHAGPVTDKVLAKYLPLIGVDP
>gi|56708982|ref|YP_165027.1| cytochrome c-type biogenesis protein CycK [Ruegeria pomeroyi DSS-3]
MIETSIELGQFAVSLALILSVFGCFQAVLAARSGAASRLVSARNAIFANFVLATIGCAVLIQAFVTSDFS
VAYVAQNSNRDLPMLYKVTAMWGAHEGSLLLWLWYLTLFSAAAVWLHWRDYPKSMPWVIATLAAIQLGFL
AFVVFLSNPFLTLTPMPGNGRDLNPLLQDPGLAFHPPVLYLGYVGFAVPFAFAIASLIRGQTGVEWVTVV
RRWVLFAWTALTSGIICGGYWAYYELGWGGYWAWDPVENASLMPWLTGTALLHSMMVQDKRGMFRAWNVF
LVVTTFLLTLLGTFLVRSGVLTSVHAFAVDPGRGAYMLGFMTVAMVVGYGLIILRADRLQDDGGISSLLS
REAAILGNTVLLLVVTATVMAGTLFPLVVEVFSDAKISIGAPYYNKVIVPIMVALVFLLGLGPSVPWRQM
SAKRFVGRFRLPLAFAGLTAVAAVLVSEAGIITLAAIFAVGFAGFASLADIASAIAARRRVMEQGVLRAT
GDVLTHSRQRIGALIIHFGVVMIGAGMIASGLFQTTQTVAMRIGDRAEAGGYTLTLRELQDTGSANYNAR
VARFSISRDGELLFEMAPEKRFYPVREMATTEIAIRSSLAGDLYMVMGDEDGQGTVVVRIFWNPLVNWIW
LGWLVLLLGALLSLSKPSRRAARSRTPEPIEGVPAE
>gi|56708983|ref|YP_165028.1| GntR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MQVVLRIDEKDTRTLQQQVFHQIRALILEGRLRSGDPVPASRELSQQLGVSRNTVLIAYEHLLSEGYLES
RANVGTFVSSALPEMSMSTLTSPANDQPSEPSGQSPAPACMPLLEHSVISPNRKKDTVDFWVGRSDGSAF
PAREWRRILDTKLRHAKGQLSEYHDPRGLREFRQALADHIGPTRGVLAKPEDVVCVGGSQDGLALIARAF
SRTFRTFIHEDPCYLGARAVFSNFSYDTVAVPVDRDGLRVDLLPETGRSLLYVTPSHQYPTGVTLSLERR
LQLLQWAERTDSIVIEDDYDGDFRYEGTPLTALRGLDRAGRVIYLGTFSKSFGPAIRIGYLVSTAELSDA
FAMWKGILSNGQPWLEQAAMADFITGGSFRRHLRRIRSTYMARRDLLARELTTRIPGTSIHGMRGGMHIS
ARLPKGICAETLQKAAAEHRIAIYRARDCGAWLSPSNTDFDDLLVLGYAAVSDRNIRKAVDVLAHAAEQQ
SG
>gi|56708984|ref|YP_165029.1| hypothetical protein SPOA0200 [Ruegeria pomeroyi DSS-3]
MYRLLPSRTIAVLLSVIVPMAVAGIFFFSRGGSVADNTPDPYAYKVAEEELSEETRQLAGMIEGAQAKIY
DLTVPETDLALARAEVIELPGGRDLIVGWQSRVTEPVLRSDIKPSEEIALITALKSHLPEDAVVLAMPDL
SDRLSQFAPSHYPLAAMAGQQAYRAPAGTEDTVLRMEKRWLGERSETEQPELFRDFIDAMVAEDAYGLAR
LQVMAGGSEAYIALHVRDSFDVGITAPDKILVGLKDFPGGTHAHDVTRQVKTWIADQDYAAYTVSQIGDD
TIRSYFLADAKDKATLLGQLLPFNTARVGLVPGAKLVFQTGGYWVYRIDPVAATN
>gi|56708985|ref|YP_165030.1| hydroxylamine oxidoreductase [Ruegeria pomeroyi DSS-3]
MMAAKLNFLNKIRPALCVLFSALLITPARAEIPDALYTALGLDKDVAPNVLYDALVKRYRDPEQGAGEGA
FADLWEPIPFSAYMAPQNFYQGPDLDIEVSRTECVECHESVTPGWVHSWENSVHGNLDEIRGLDASDSRH
YKQELIGQVETNLHSMGLLEEGQRLNDVGCIDCHMGVGVESGNHKTDLYMPDAASCGQCHVQEFAERESE
RDTLDWPQDQWPDGRPSHALSYIANVETAIWAGMEQREVAAGCTMCHTTQNTCNSCHTRHEFSAAEARKP
EACSTCHNGVDHNEFENFMLSKHGVIYNASGDEWDWELPLAQAFEQGGQTAPTCQTCHMEYEGEYGHNLV
QKVRWGFNPMPEIADNLDHPWFEERKESWVATCTQCHSESFARSYLDVMDQGTIDGIELVKEAKVIMQGL
YDDGMLTGQTTNRPAPPAPDEDAPGGFFGFFASQGNNPTAIDVEYAEMWEQHIMKHFKGLAHVNPGGFTY
SNGWAKLIRSLARIKDADTTLREKADMLARIKKLEEGN
>gi|56708986|ref|YP_165031.1| histidinol dehydrogenase [Ruegeria pomeroyi DSS-3]
MPQFLDSRQPDFETAFTALLGAKREDSPDVDAVVAGIIADVRARGDAAVIELTERFDRVALTPQSLRFST
EEIAQAVDEVPAPERAALELAAARIRAYHERQMPQDADWTDDTGARLGWRWSAVSAAGLYVPGGLASYPS
SVLMNAIPAKVAGVGRLAIAVPTPDGQVNPLVLLAAQISGVDEVYRIGGAQAIAALAYGTDTIAPVDKIT
GPGNAFVAAAKRRVFGKVGIDMIAGPSEILVIADRDNDPDWIALDLLSQAEHDESAQSILITDDAAFGRA
VAEAVDKRLETLERRAIAGVSWRDFGAVITVSDLDEAAALSNRIAPEHLELCVSDPEALAARTIHAGAIF
LGQYTPEAIGDYVGGPNHVLPTARSARFSSGLSVMDFLKRTTMSRMTPEALRAIGPAAAQLARSESLEAH
GLSVQARLDRLNG
>gi|56708987|ref|YP_165032.1| hypothetical protein SPOA0203 [Ruegeria pomeroyi DSS-3]
MRQALIDLAQELSAVCGCYEPDALCDALGVEDRPDLRHDVLGALSRGVTEVLCPVPEASPRYGWMLAPDP
RAAALRRFLTRAQLDQALELAPTPWQDDLFGQVLHQLLAGAQVEVARPKGSDNETRLLTHLRHNAAILDA
VQFARAVPALDARALETLESEAKRQIQEVQKWRDLVIVLPRRHFGYDNIRRRLSHFLRGKTKDTRPLLLT
GTGGIGKSAVLARLLQDWQTRRDAPITVILDFDRPQLKTGAPFQIAREILNQIAVGVTRTLDPPEAAANV
SKQLRMRRAMLSSTDLMGEVRDHGAQADFLESQLPGWFRGDWTHGLRSQPIALAFDSFEAVDRQGGEVVR
LILAVEEQFRRELPGLRCVLSGRAEPLEGEELDDRFGPSSRRITLDGLSVEAGAQLIEEEDRRLSEEDQQ
RKGIDRPPVLTDETLRRTVSRLLKGHPLALLIFVKYARTHDGDIADLIADLEEDGAGAFRSEFAHRFLYE
RILDRIDDPELRSLAHPGLVLRQINTDLIRFVLAVPCLGLPEGTVLPEGRAEALRKKLENEYWLVDPGEP
PFDLRHRADVRRMMVAGLFAGPREADTAADHKRKARLREDALAVCSAARDYFRLGPPDGSDEGARQRWQA
MDPEMRNLHALYYEAFLSPRDVPEFDAQTARALDLSLGEDLETLPAAWRARVNVLLGRVLSKEEAFDLGD
DLRELAEKQEFTSAAQHGLSTADEDFTTVSEASESRAGDPLGVRAHEDVYRPDGSDWRSASRLSRDIQRA
FAAARFAEVADLAPRYFEALEFRSNKEIAEDHADAMQRGYWRHPMWQCLLVAGSGVETSAMAQAASVFLD
SADHQRALPGVIAFIAQQTDPMQRHKELDVLQGADFKSYVDAYRMSGSILDGWLGRKTALMASGRGVPLS
GKPISRSPRALSLAAGRAGRAEEEFGALFEAAPDLAGRLEKFWAHGAPGISDITDLYRQFGEEEDLTRLL
ASEALPQTDLAFRMFRGLNPDLYPPLRRILEEQEGEVVLRLAEALAQRARHWPEELRMSALSGYSRNQSA
TLVEVADQCGELGTLCACLAEFDSRAGTVREMFDSLSAWFFPFARDLEI
>gi|56708988|ref|YP_165033.1| hypothetical protein SPOA0204 [Ruegeria pomeroyi DSS-3]
MTEQDWTEERLISCVLGVVRGLHFARPQLRGWYDGWLAARRLPGAPVSFAHAMVVTGRGGGLNPARDGDA
LCLALAALGGPQAVADCFAAAVSAGLFDIGASDPLPVHRRQLAQKMISALGLKRAHATLQRANTEALVDE
TAFWTDPGNILPGIILGRRRLCRVEALNEMGDRVTGSGFLIGAFDGADQFPRDQGYDRPAAGAGRSADPL
RLFRDNRHRRGQGRGVRRGRGLVDRPQRDRAQTGRGLRLGQAGQAARLAARGRWVLGLCCDPADRRAGSA
TGLVRSGAGNAGRAEWGLDPASSGFGGTHDHRRQGGLWPTAPAAVVSSGDYGAWLLGRAGAGPEWSTGGA
ALSGARGPDPSARCPSSSRAQRGGPAHRRRRRSGSQGGAGQAGRDPRPQPGGGLSGRAPTGLWPRRLHRR
ARAAVEGRPPHSARACGIPRGGGGHPPGQKLFGRDPARALCRARTPSYRVSRRRRTGRCLSHGLRYAGQL
CPRCGGQPARGTRHHHPGLCQTAGVEVHAAGQRPAGRPHGLDPA
>gi|56708989|ref|YP_165034.1| serine protease [Ruegeria pomeroyi DSS-3]
MLDLLKAAARVATPTGQEALPTDILSFTLEYPEPVTAEAARGAIAALLEGDRFDLFPATQADDDMLILQF
PGVPIEQSPGYLFAEAAALKEALDLVSVTPDILPPFTDAESVPPPVENVGDVIWDLCRAHTPPLADRNWA
LRLIKADRAMSRFGVTGAGQRIGQPDTGVAAHHELKHGVDKARGYNFVDNTPDPTDPLLPSMGSPGHGTG
TASVVISRRSGRVNGSAPRASLVPLRTNNAVVIGSWAPVARALDHARAQGCRIVTMSLGSGFAPRLIRRA
VARAVSADMILLAAAGNCVRFVTYPAFDRNVIAVAGVDHAGRRWRGSCRGPEVDIAAPAENVHVARRRPG
ETDLSDVTDTGQGTSFAVALTAGVAALWLEHHGWTALRQEARRRGLPLQELFRAALRQSANAPAGWDHSQ
MGAGIVDAEALLALDPADIMVGAAPESAGPAELLFGADFDAGGLQAEAEYLAFDWRLRERPEASATVENA
MREMPSPALAALLGDRQPLGEPGLVLAPAAPPAPLDRAFRRLAAGRGGTTESAADLSYEASVDRLRGEGL
DTVMETVNELFQARAESAPDLVDTDMQAEAADKIRQAVQSHLDPDRDVRLSPGEVGFALEALVKLSGRPA
IRVQADGSELFDPLLGTWRADLLTAVSRWQPLVRAVGRIDARNPQGVWVHVGTGFLLADGLVMTNRHVID
AFAEPMPEENGQRPFKLRFPVSIIFDPDAADETTRYTLTEVATAGGARIGRTVNMARLDMALMRIDPDNG
HAPPPDPIDRGLISTTDLALTKILVAGYPAEPRNVRGPDPRQDQDTYLAFWARLGELYGDRYGVKYISPG
MIEARPGAVTGDPRGWAFSHDATTLPGNSGSAILSLHNPGQLCGLHFGGQSLETNLAHDIQAVLGMGDGA
FATGLLNGQGE
>gi|56708990|ref|YP_165035.1| Crp/FNR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MRPTSRNALPPLETVLAGVSLLAGLEAEILSRFAADLELVTVHTGQTVMEQGETSTEMYVVVRGRLVGLL
LSPNGKEVAFTEITAGRYFGELSALDGRPRSLTISAAETTVLARMPAQRLLDWMAREPRLAHNLAIDLAE
RNRVLTERVFGLVVHDVDKRVRALLIQQAQAARQLKPGGVLDPSPTHDAIANYIGATREAVSRVMARLSA
AGVIETGRRRLEIADIEQLFEGL
>gi|56708991|ref|YP_165036.1| adenylate/guanylate cyclase [Ruegeria pomeroyi DSS-3]
MSRTIGSVTSWLADIGLEVYAERFEQADIDLEVLEHLSDQDLTDLGVTSLGHRRKILARIADMRDAESIV
APPAPVEEDQSERLYLTVVFCDLVGSTQLAHTLGEERFTDLLGEFYRAVDGAVDRYGGHVAQYHGDGVLI
YFGYPQALEDAALRGVMAACESCRQVGAIAVPGALPMQVRVGVASGPVVIGDRQLSQNARGGRAYGAVVN
LAARLQAEAQPGGVVVSDTTAALVKHHFDLNFLGLRHLKGIDEPAPVYAVEARRTPDLGVALLARPNRVP
FVNRRSELARLSACWNAVAMGAFNLITVAGEHGIGKSRLVGEFLDRLRREDRPVRHVNCPQQGRDTPYGA
FRLLLDHDPNLPAATALLAELEAVPKATQAERRQRRARVIGLLADHFGQTESGPKVLWIDDLQWADPSTI
EVLLTLASRRPPGLMLIVSARNALPDQRLMKVDGLVPISLGLMSPEHTNSIVREVLGDVQGAEALVAPLV
ARAEGIPVFAEELALEMRARLAGPEDVDAENLPDMSVPSSLQQSLQARIRRLVRARPLLRLVASIGREAP
VPLLRDLWSGPGSIEEALDELIAAGLAELHLARDSQHENRLILRHQILQDCAYDIILTRDRERIHTAIAE
ALARRRAAGQAVEPTLMADQLERAGRLRPAAELWAEAGRAAAAQSADAEAVALFRRALALVPRIGATEGD
WSDQFEADTLLALFPALIGAKGYRAAGEDVLNRINALIERTGGSQRVFSTMFFRWIDICVQGDIDAGHEF
AAGLADIAHADPTGLHALVLDRMLGSSHMFRGEFDDARGYLDRFLATYDPARHADPLRPFGATDNHATVL
CCVAAIEAFTGTPETTRAATAAALAAARATELTHTLCHTLTFGAAFPAAIRRDWSQFRIHASELRQLAQE
KELAFWLVYARMLTGIGDIAAGRVDEGQAEYAYGSNVLGAQGFEFLQPTFRVIHALAEEAAQRDGPSGDL
ASLERAVRSGERWMLPECLRLKERWGAS
>gi|56708992|ref|YP_165037.1| oxidoreductase, FAD-binding [Ruegeria pomeroyi DSS-3]
MLWYDSRAQRLRERSAVWAQNQKTDPDFDGLPPKYAEELQKNILGTVVLPGDPEYDTDRMLSNPRFSAYP
QVIVYCEVETDVAECLRVARALSMAVVVRSGGHSTAGFSSQNGFLIDVSRMNDVCISPEALRAWVGPGTN
FGKFNAKLLPYDLHTPGGACPDVCVGGYMQGGGYGFTARIFGMNCDQVEEIRVMMTDGRIVHANAELNPD
LFWAVRGGTGSNFGVLLGVKYRLYRGSTFAGFSVRWSMQTDAGVQDTATSLAWLQENFMRTGAPDTMGYQ
MIWAFEGPEGQAKEPVLLMRGMYRGTREELQEKLAPVLALPGATLQAIYDPQQYIDLNRILLSEPYEVPE
FPADMTPMPPPEAKISRYVAKPIDAAGWKALLDYFRTSPSPYTIAAMEIYGGAIARMPKGENAFFHRDVY
CDLFFDVFWLTEQEKETMLAFIAGWEAAFAPHWTGQSYQNYPSPDNPGFADEYWGDTYWLLRLIKHKYDP
INLLRFPQSIQPLEWHPPGPGFPPGFRGFEDPIQAIAG
>gi|56708993|ref|YP_165038.1| oxidoreductase, FAD-binding [Ruegeria pomeroyi DSS-3]
MDLLTVNDRPGQYPPSYYAAHASTLDPFPRAAGALTCDVCVVGGGFTGLSAALHLAQRGYDVVLLEAQRV
GFGASGRNGGQVGQGQRLDQQELEKMLGRDHAHALWQVARQSVDLVRDLAASDLVHADFHPGIIHADHRE
RFVSHSHDYVRHMHEEYGYTAIRALDRDEMRHLVASDAYHGGSIYDDAGHIDPLELVLGLARMAVAAGVR
IFERSKVSTLTEGDPALLRTDDAEITARHVVMGCNGYLGRLDDRVAARVMPINNYIIATEPLGPERQEAL
IRNNHAVADSKFVINYFRFSDDHRLLFGGTESYGYRFPSDIAAKVRKPMLEIFPQLADVRIDHAWGGTLG
ITMNRMPHFERLSGNVLSLSGFSGHGVALATLAGQIAAETIAGQAERFDLMARVPGRPFPGGPALRTPLL
ILAMLWFSLRDRL
>gi|56708994|ref|YP_165039.1| integral membrane protein [Ruegeria pomeroyi DSS-3]
MSAGIVAIILSAALLHAIWNAIVKSAADRTTMLGLVASGHVLAGAVMVTLLPLPAPESLPYILLSTVIHF
GYYYMLGQAYRHGDLSVVYPIARGIVPALVALWALLLLGETLPAQAWVGIATIAAGIQLSSWSALRHGVG
RAALGFAVGTGLCISAYSVVDGIGVRLSQNTLSYWAWGAFLHIFIAGFVAIRKRGTLAGLKPKVWATGIL
GGLVSMAAYGLVLYAKNFAPLGAVSALRETSVIFAALIGFVFLGEGNWKRRLGAAALMAAGVALIGTAG
>gi|56708995|ref|YP_165040.1| Na/Pi-cotransporter family protein [Ruegeria pomeroyi DSS-3]
MAIFSFLISLAGATMLLLFAVRMVRTGIERAYGSSFQRVMTGNNGVMRAGAVGLVMAVVLQSSAAVALLT
SGFAGAGLMGFGQGLAIVLGGDLGSALVIQILSYRLDWLVPLLLAVGGWLFVKTEQRKARQFGRILMGIA
FILISLRFLREAMDPIRDSAFLPAIADYLARDYVTAFIVGGALAFVMHSSVAAILMCVTLVQIGAIPFSA
GLSLVLGANFGSAFIPVWLSRGMTMPARRIPFANLALRGTWAVLCLFAVNLALRNGFAPGPHGGQELVYA
HLAFNASLLVLALPFCNLLAAPFARLLPDPAQPVDADTLARPASSLDPAHIGSPAQAVSSLKRELLRMAD
LVEAMFRPVLGLYRDGDKTRIKAVQSLDKEVNACLSGIRRYVAALPADQIGREAARSARDMLEYAVRLET
AGDVVAGRLCVLAGDLRKTGNQFSKEGWSELQHMHETILANMKLASNVLISDDLESARLLSLEKTELKRA
ERSSRKRHFRRLQNGEVQSFDTSDCHLETLRALREFNSHISAVAYPILYANGQLLETRLIETLPATQDED
>gi|56708996|ref|YP_165041.1| nitric oxide reductase F protein, putative [Ruegeria pomeroyi DSS-3]
MRAFLCDPLSRAWLALLGLSLAGALLTLAPVPQALIGSGVLILALIKARLILSRYLELGQSPAWMRGIGT
VLTGFVLLLLALSLL
>gi|56708997|ref|YP_165042.1| nitric oxide reductase E protein, putative [Ruegeria pomeroyi DSS-3]
MWVLILSELLVFGAGLVALLAVRLSDPAGFAEAQDHLYRTGAALNTVVLVTSGFLAACALRWRRSGRRAR
ARWALLLAAGLGALFLVIKGAEFAGKAAQGISYDTHPFFMFYYLLTGFHAAHVLAGVAILLLVAWRDAPR
NIEAGAQFWHMVDLVWVLLYPVVYLAG
>gi|56708998|ref|YP_165043.1| nitric oxide reductase D protein [Ruegeria pomeroyi DSS-3]
MVQIDFEPWEPEETIGKLWHSLASRLDAPLVHEGAAVDLSEVAGRLAVLFRGLGGSAGVELRPVSPEISR
HRLSWRRRLGTEAEALPRASFDGEVLRLPDRLAVFPMRAANGALYVWLAAAAAHAGTRVEEDDPLRADLR
ALSAARAMVAATLADAPGLRPLYAELCKGLLQQRDLPNLPPAEAAVEELIRLMLGDPQPLSARAAQFQAM
DETLTAPHGYQPFRPVPLWPELRAVALSEHHEAESRDTEGPPEDSGEKTHRARRRKSDMAARHDSFILHK
FEAILSWAEFLNLNRRVDDDDPDNAKKAADDQDEIGLGQISKAPPTRLKLHLDLAPEDVDRERLSGRVLY
PEWDVRTGAYLTDHVNVLTSEAEIRDGAEAFTHDPATARRIRAVKRQFEALRPGRMMTRGHLDGDQLDIE
AAVRGHLDRLANGEGSERIWMQSRPVARDLAVSILLDVSRSTESAVSGRAVIDIEREALAALAWGLDACG
DDFAIHAFSSLKRARVYVQRCKGFGEMMSPQVEARIASLRPGFYTRLGAAIRHASADLAGQGRKRRLLLV
ITDGKPNDLDHYEGRHGIEDTAMAVREARRAGQSVFGVTIDKSGKSWFPRMFGQGGFAVIPDPNRLTLAL
PQIYRQLVGA
>gi|56708999|ref|YP_165044.1| nitric oxide reductase Q protein [Ruegeria pomeroyi DSS-3]
MQMDGSKHMGTGAADAPFYLAQGDECDIFTAAYDNNLPVLLKGPTGCGKTRFVAHMAAKLGRPLYTVACH
DDLAAADLIGRYLLKGGETVWVDGPLTRAVREGAICYLDEVVEARKDVTVVLHPLTDDRRILPIDRTGEE
LEAMPGFMLVASYNPGYQNILKTLKPSTRQRFISLEFDFPAPELEARVVSQESGLPLERCKPLIRLAGKL
RGLKGQDLEEGVSTRLVVYAATLIAQGMPTERAILAAMVEPLTDDEDIKRGLLDLTTAVFG
>gi|56709000|ref|YP_165045.1| nitric oxide reductase, large subunit [Ruegeria pomeroyi DSS-3]
MKYESQKIALVYFAVAMGLFAIQVLGGLLAGWIYVAPNTLSELLPFNIVRMLHTNSLIVWLILGFFGAAY
FLIPEEAEREIHSTKLAYIQLAILVLGTLGVVVTYVFNLFEGHWLLGKEGREFIEQPKWVKAGIVVAALI
FLYNVSMTVLKGKKTAITNILLLGLWGLALLFLFSFYNPSNLALDKQYWWYIVHLWVEGVWELIMASILA
YLMLKLTGVDREVVEKWLYVIVAAALFSGILGTGHHYYWIGTPGYWQWIGSIFSSLEVIPFFAMMAFAFV
MVWKGRRDHPNKAALLWSLGCATLAFFGAGVWGFLHTLHGVNYYTHGTQITAAHGHLAFFGAYVSLNLAI
FSYAMPILLNRDPYNQVLNMASFWLMSSGMVFMTFVLTFAGTIQTHLQRVLGEYFMDVQDQVAIFYWMRF
GSGLVVVIGALLFIYAMWVPRREIIERGTAETPAE
>gi|56709001|ref|YP_165046.1| nitric oxide reductase, small subunit [Ruegeria pomeroyi DSS-3]
MREVMTKSMARNIFYGGSLFFILIFLALSAHSHMYIRSTSTNAETLTASVADGKHVWEKHACINCHSILG
EGAYFAPELGNVMTRWGVQDDPDAAFEMLKGWMEAQPTGIEGRRQMPRFDLSDTEMRNLSDFLLWTNTID
TQGWPPNDAG
>gi|56709002|ref|YP_165047.1| magnesium transporter CorA family protein [Ruegeria pomeroyi DSS-3]
MRAHSLTPICIFDFEDGRAIPVAEDWPAAAPASGAGFRWLHLDLSDPASADWLHAHIPPVAASALAQAET
RPRCDPLADGILLNLRGVNLNPGSAREDMVSLRLWVTPALVVTARIRRIRATDELRQQSDSGRGPGSVAL
FLSELLHGLSHRIETVSLELDDRTDGIEEEALQGAGDMHDRLSALRLTVIKLRRYLHPQREALDALLRNE
AGLFDSAGLVLLREAVDRTRRTIEELDATRDRLAAVQDQIASEQVRLLGRNSFVLSVVAAVFLPLGFLTG
LFGVNIAGMPGTGTPLAFWLLAGASALLGLAIVLLFRLLKWL
>gi|56709003|ref|YP_165048.1| NnrS, putative [Ruegeria pomeroyi DSS-3]
MTALARLFSEGYRVFFLAAGLYGLFAGAIWVLYLAGDGPALAQVPSQWHAHEMVFGYATAALGGFFLTAV
PSWTGAPGARQGFIALAAGMWLAGRLAVWYAGVLPPVWVAVLDLAFLPVLSLKIVTQLLKRPKPQNLMFL
LFLAYLWAADLWLHLDWIGTGYGDTETGLRAGLAVLCALISVLGGRITPAFTRNAMKRAGVAETLWPVSR
APLERAAVVLALLLPGMVLGGAPAGLSGAVALAFGAVQALRLMRWGGLWCLSQPILWALHLALAMLAAGM
ILWGLAGLGLGSELAALHLLGIGCVGGMTLAVMSRAALGHSGRPLVAPGPMVLGYGLMAAAALTRWAGSG
FEALYLPAMLLAAALWTAAFATYLAAMWPALIGPRAGAAG
>gi|56709004|ref|YP_165049.1| cytochrome cd1 nitrite reductase [Ruegeria pomeroyi DSS-3]
MALGLAAPMVAAQDSHGSDAGAAYQPSMTTLGALNLEIPGRREGDPVMTQEEYNIGNKIYFERCAGCHGV
LRKGATGKPLTTDITRDVGYEYLRDFITYGSPAGMPNWGTSGEMSEEEIDIMARYILLDPASPPEFGMAE
MRETWKVLVAPADRPTEKMNDIDIDNLFSVTLRDSGQVALIDGASYKIHAVIDTGYAVHISRISASGRYL
FVIGRDALVNMIDLWMETPATVAQIKVGSEARSIETSKFKGFEDMYAIAGSYWPPQYVIMDGDTLEPLKI
KSTRGMVYDDQSYHPEPRVASIVASHFNPEFIVNVKETGKILMIDYSDIKNLKVTEIEAERFLHDGGFDS
SKRYFLVAANARGKVAVVDTKDSTLTALVETGGQTPHPGRGANLMHPTYGPVWATSHLGDETVALIGTDP
EGHPDNAWKVVQTLYAQGGGSLFVKSHPTSEHLYVDAPLNPDAEISGSVAVFKLGDLAQEEPEYTVLPIV
EWAEIGEGQPRVVQGEFNQEGNEIWFSVWNAKDLESAIVVVDDKTLELKAVIKDPRLITPTGKFNVYNTR
ADVY
>gi|56709005|ref|YP_165050.1| nitrite reductase heme biosynthesis E protein [Ruegeria pomeroyi DSS-3]
MTPAGHVHLIGAGPGDPDLLTLRALRLLQEAQVVVYDRLVDPRIVAMAPEGARMIPVGKSPKCHPVPQDR
INRILLDEARAGHVVARLKGGDPMIFGRGSEEAAFLMAHGVRVDYAPGITAAQGASSATGVPLTHRGLAT
GVQYVTGHRQAGQVLDLDWKRLADPDTTLVVYMGVANIGQIAIGLMTENLPATTPVLAISRATTPGERRL
LSRLDRIAADARAEALEAPTLFIIGKVVSLYAQQPVTDLLEQAVAHG
>gi|56709006|ref|YP_165051.1| cytochrome c55X [Ruegeria pomeroyi DSS-3]
MQAGTALGTGKALLTIAAFLATTAFAAETLDPDALRRLVQQDCGSCHGLTLKGGLGPDIRPEALGHFDRE
VLTGVILDGIPDTAMPPWRPLLTEEEAEWIARYLQDPEAR
>gi|56709007|ref|YP_165052.1| cytochrome cd1 nitrite reductase [Ruegeria pomeroyi DSS-3]
MKPLVLTLVAALMAGTAGAQTVATGDLGLVIERATGSVLLVDQSERAALARIEGLGDLSHASLVYSPDER
FAYVFGRDGGLTKLDITTRQIVNRVLQSGNAIGGAISDDGRLVAVSNYDPGGVRVFDADTLEMVADIPTG
GKTIGLVDAPGRRFVFTVWDTGETWIADFTSPEPMLTTIPGMGKNPYDALITGNGRTYITGLFGEDGLSA
LDLWDETPQPIRVLPGYGRGQQEMPVYKMPHLEGWALTGREFVLPAVGHAQVLWVDADTLTETGRTATHG
QPVFAMARPDGRQVWVNFAHPLNDTIQVIDTVSKEVIHQFKPGPAVLHMEFTPRGHEVWISVRDAGKVMV
YDTRTFEKLREIEADSPSGIFFTVRAHRTGL
>gi|56709008|ref|YP_165053.1| nitrite reductase heme biosynthesis D/L protein, putative [Ruegeria pomeroyi DSS-3]
MCQITDPVDRALLDDWQRNFPITDRPFLGLAEQLGISEHEVITRLARMQAAGRITRVGATIAPGSASAST
LAAVAAPEDRIEEIAGMIGAEPGVNHNYQREDDWNLWFVATGPDRAHVDATLARIGAASGLRVLDLRLLR
PFNVDLGFRMGAGAPRVPTRRAVDASVLRPGDTDLLQALTQGLPLVPAPYAALAEGLGLTPSAAMARIAL
LQQAGVISRLGVIVRHRALGWSSNAMVVWDLPSERIDSAGPTLAAHPGVTLCYERRPVPGVWPYRLYTMI
HARSRREALAVLDSAKALPELADTPHKVLFSTRCFKQTGALIKPRKEEAA
>gi|56709009|ref|YP_165054.1| nitrite reductase heme biosynthesis G protein [Ruegeria pomeroyi DSS-3]
MTPDATDRRILNRMQEDLPLTAHPYAAVAAELGLTEDDLLERLARMKAARLITRFGPFFDAAAMGGAFCL
CAMAVPEAEFESVLTKVNAHPEVAHNYERTHRLNMWFVLATETPQGIAATADAIETETGIAVLRFPKLQE
FFIGFRVAA
>gi|56709010|ref|YP_165055.1| nitrite reductase heme biosynthesis H protein [Ruegeria pomeroyi DSS-3]
MIDETDRRIIAAMQEGLPLVPAPFARVAADLALPEPELMERIAALKARGVVRRIAAAPNHYKLGMTSNGM
TVWNVDDARIADLGARVGALPFVTHCYERPRALPDWPYNLFAMVHGADRDEVEAKRAEIAALLGTACRGH
DILYSTRILKKTGLRLKERT
>gi|56709011|ref|YP_165056.1| nitrite reductase heme biosynthesis J protein [Ruegeria pomeroyi DSS-3]
MFRLTEYMHQLIAPTPVRQRRPGPVKPVVIWNLTRRCNLKCRHCYTVSADVDFPGELSHEQAMETLEDLG
RFKVPAIILSGGEPLDRFDFFDIAMRARQMVPMLALSTNGTRIHGETADRIADVGFSYVGISLDGIGATN
DWFRGVEGAFADALRGVRACKARGIKVGLRFCLTEGTQHHLPNLLQLCDDEGVDKFYLSHLVYAGRGDKN
RGEDAAHLRTRHAMDLLLDRAWVAAAEDMPLDIVTGNNDADAGYFLDWVRRNFDAAKVAHIRAHLAAWGG
NSSGLGVANIDNLGRVHPDTYWSDYTVGNVKTAPFSQLWTGDDPMLALLRTRPRPLKGRCGACTLKDVCG
GNTRIRALQLTGDPWAEDPACYLSDAEIGVTGSDRLTVTPFRGKKHDPAHQFF
>gi|56709012|ref|YP_165057.1| nitrite reductase protein N [Ruegeria pomeroyi DSS-3]
MLAGPVVAGPAEDYAEYCASCHGAARLGGLGPALIPETLGRMRGPKVAAVIREGRTATQMPGFSDTLDEA
AIAALAEYVKEPLAEIPAWGEGEIMASRVLDGDYVAAAAPVWDADPMNITLVVETGDHHVSVLDGDTFDV
LDRFETPFAVHGGPKFSPDGRYVFIMSRDGWVQKYDLWSLQQVGRVRAGLNSRNIAMSHDGKWLAVANYL
PMSLTLLSTEDLSVAKVMKVTAKDGTPSRVSAVYQAPQRQSFILALKDAPEIWEVATDPDAHPVYEGFIH
SREKGMVEAIASSEGLFARRRIEISEPLDDFFFSDDYRNLIGAARDGVRGVVVNLNVGREIAELPLEGMP
HLGSGISWARDGRRVMATPHLKEGKLSVIDTESWTRIATIETEGPGFFLRSHENTPYFWADVFFGPNKDA
MHVIDKQSLEIVRTLRPAPGKTVAHVEFTRDGKHALVSVWEEDGAVIVYDAATLEELRRLPMKKPSGKYN
VWNKITFSEGTSH
>gi|56709013|ref|YP_165058.1| hypothetical protein SPOA0229 [Ruegeria pomeroyi DSS-3]
MLLWPAVTATVAINLFMAALMLRVLGGTPLGPVAALLWSLPLGIPASWLAGRWLRRLLDEAES
>gi|56709014|ref|YP_165059.1| LysR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MVAKQISKADIHLLRVFCIVVDSQGFSNAQVALNVATSTISRQISELETRLGMRLCDRGRSGFRVTEKGE
TVYQAAQKLFGALGEFQETVDGSRGRLFGHLALGIIENWASNTSAPIVQALSRFTDLAPDVTIELHSLAP
DDIEFAVLDGRVPIGIGVFHSPKPGILYTKVCEERVCLYCGSGHPLFHMTNLEDEERVLRQAQFAKRAYL
NEDVVAPKTRNLPSNATAHQMEAIALLILTDKYVGYLPSYFAEEWVAKGRMKIVAGGSFDRPVSVQTATR
RGMKLNSVGRTFLDILTAEAVKQGG
>gi|56709015|ref|YP_165060.1| glycine betaine/proline ABC transporter, periplasmic substrate-binding protein [Ruegeria pomeroyi DSS-3]
MENLTRWMTTTVMLSLGTSAFAADVVIGVPNWPSVRATAHVLKIVLEDNLGLEVELQNGSNPIIFEAMDA
GAMQVHPEVWLPNQSNLHNTFVKEKGTVAMNPNGIAADQAMCVTRGTAERTGIKALSELSDPDMAAKFDS
DGDGLGEIWIGAAGWASTNVEKIRAKSYGYDQTMTLKEMDETLALAEVDAATDQDTNIAFFCYTPHHMFQ
LYDLVLLEEPPHDPAQWKVAQPTDDPNWLENSSAAVAWDKAYLHIHYQAEMDPAAAAVLAKVDLTSDQVS
AMVYALIVDGMDAEAFARNWVEENADQVDSWLN
>gi|56709016|ref|YP_165061.1| glycine betaine/proline ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MGTDEVIRLERVWKVFGEQAEDAIAAIQARGLSKAEVLGEFGCVVGIANCSFSVKKGEIFCVMGLSGSGK
STMVRHINRLIEPSAGSITVLGQDVLALSPDQLRKMRATNLGMVFQHMALLPHRTVRDNVAFPLQVRGEP
KSRRWEVSQRCLEMVDLQGYEDRFPRELSGGMQQRVGLARALASDPDVLLMDEPFSALDPLIRRQLQDQF
MALSAELGKTTVFITHDLDEAIRIGTRIAIMKDGRIVQIGTPEEIVTRPADDYVRDFVDGISKLKLVFAH
SIMVPISQYRAKHWENLDASIRVSHATDLDHLIDVSTATEQPIVITADDGTDVGVIDKPTLLKGIQGGKA
>gi|56709017|ref|YP_165062.1| glycine betaine/proline ABC transporter, permease protein, putative [Ruegeria pomeroyi DSS-3]
MSDMGMQGGPVAPSTAVGDFAGQNGAYYSAAFKRIQDTTGFAWSWNTMAALFGPIWGAARGVWGFFWMFL
VLELFALVQLGRGLWGELGSQQLAKLDRALANIAKREAQAAELQAAGDAAGAEAKLKIAENLKKVAARAQ
EQADLAAAEATSILLIGLALLLLVKLLEGFYANIAYEAHYLKWRAKPQSQQAGIRTSSIVFGVVMVLAIV
PLTLLRFTVTNPDQVLARLTGGLFGDTIPVTHFPVEKEYFSALSKRGDAGFDWAADNFSDAFDGITAGIR
WFLDGLEILLLQTPWPVVMLVIVVAASRLAGLRVAIFTAASLAYLAFMGLWELSMITVALIGTGAILCIL
IGVPFGIWFGKSRRAYAIAEPVLDFMQTMPAFVYLIPIIAFFGTGKPPGVLATLIFAMPPVVRLTALGMR
GVPETTKEAAIAFGCSPWQLLFNVELPLALPSIMTGINQTILMSLSMVVIASLIGADGLGALILESLQYA
AKGQGLLGGLAILLCAMVIDRIAQGIYRKRVGGA
>gi|56709018|ref|YP_165063.1| agmatinase, putative [Ruegeria pomeroyi DSS-3]
MSDPHLNSMMENLYWWGIPTLFRCPNLPPAGQDIALVGVPHSTGNGTTERDQHLGPRALRNVSSMQRRMH
GGFGLDPWSAAKIADLGDVPFPRANDNEDCIEQITRFFREIDAAGARPISVGGDHSITGGIIQALGCGAI
TRGQPVCLLHLDAHTDVFTKVDHFLGARKSAAHWGAYLADQGKVDPGHSMQIGLRGHARTLDWLQPSYDY
GYNVVTMKEFRQRGLADVVAQIGEVLAGRPVYITFDLDCLDPTIAPGVSNIEAGERGFDIDEAIGLLNAV
RGLNIIGGDIVCMMPTKDSPNQITALTAGAVMFEMISMVAENIANQARGAGT
>gi|56709019|ref|YP_165064.1| agmatinase [Ruegeria pomeroyi DSS-3]
MSQKDTEFFQPVSGMDLPRFAGVPTFMRLPHVTPDHAAYDQVQIGLVGVPWDAGTTNRPGPRHGPRQLRD
LSTMIRAGNPATGVNPFALVNCADLGDVAPNPIDIMDCMDRISRFYAGLKSSGILPVTAGGDHLTTLPVL
RGLASDAPVGLIQFDSHTDLFDSYFGGNKYTHGTPFRRAIEEGLVDPRRMVQIGIRGTAYNTEDVEWGEA
QGVRIIRIEEFFDRGVADVMAEARDIVGDKPTYCTFDIDFVDPAYAPGTGTPEVGGPNSFQALQVVRELS
GLTLIGADLVEVSPPFDAQGNTAWLGASILFEMLCVCAKAISARARDA
>gi|56709020|ref|YP_165065.1| C4-dicarboxylate transport sensor protein dctB [Ruegeria pomeroyi DSS-3]
MRLRSFVFPTIATAVVAISVFKVSYGYFQSEERTKARGRLSLYQTSVSGELERFSHLTYVLARDPVVIET
ANGGARRDLNIRLEAFAKQAGLDAIYLIKPDGFTIAASNHREPGSFVGQNYAFRPYFQDALAGQQGRFYA
IGATTGLPGYFIADAVHGDPETPAGVIAIKISLTKLEESWLGSGEQVFLANQDGVVLLASDPAWRYKTLS
PLSDMRRQEIKAARQFSGQELDPLDWAVLPDRRARIAGSERLHLVGSDLPHGWELHFFASDDQALTRSWL
VTALVVILAAIGFIAFQIQRARRVDAELRRSAREEAELRLANEQLAKEIQERMTAERRLKRTQSELERAS
RLAALGRLAASVTHELGQPIAAMRNHLVATEMAGGAQTRLAANIAGLVERMEGITRQLKFFASSTTEEFT
AIDLRDAIRVSLDLVAPNLEQSGTGVRLDLPDTPVHIRGIRLRIEQVMTNLLRNAIDATEDSTDPMIRIR
AGTDSDDAWVEIKDNGHGLGTATLADLQEPFVTTRESGRGMGLGLAISASIVKDHDGKMSACDSDTGGAV
FRVTFPLTASEDG
>gi|56709021|ref|YP_165066.1| C4-dicarboxylate transport transcriptional regulatory protein DctD [Ruegeria pomeroyi DSS-3]
MEERRPYSILVIDDDKSMRLSLVDLLEAAGWQVEAIARATLVAAKLDDNPPDVILSDIRMPGMTGLELLS
SLDHASAPPLVLISAHGDIPMAVQAMRDGAYSFVEKPYEPRRLLSILTHAAEQNRMQQDNSRLKERLIRL
SGLDRILLGQTAEIVSLRQDILDLAGTRATVLITGETGTGKELVAHALHDLGGDGQAPFLALNCAALSQD
TFETEMFGIAGQSEGRLAKASGGTLFLDEICSCPAAVQAKLLRVLEDKQILPVGASSAIKAEFRVISATS
EDVQDAVSAGRLRQDLLFRINTVVLGLPSLRHRRDDLMLLARHFLEHYAHVYELAVPKMSQDDMAALLAH
DWPGNVRELRNVCERRVLAARRGGGSMARAIAADQQLDDVPGTLREAVAVFERELISKAIQAHEGRMDAA
AEALGIGRRTLNEKIVKLGLDKGALL
>gi|56709022|ref|YP_165067.1| TRAP dicarboxylate transporter, DctP subunit [Ruegeria pomeroyi DSS-3]
MQNTLKGVAIAALTVSFVGEAGATEWNVSVWGKRRAFTEHVEKLAELVSEKTGGAFTINVSYGGLSKPKE
NLDGISIGAFEMAQFCAGYHADKNRAITVLELPFLGVNTLAEEVAVSNAVYAHPAAQQEMAQWNARLLMT
SPMPQYNLVGTGAPRDELAEFEGMRVRATGGLGAAFSAVGGVPTSVPATEAYNAMESGVVDTVAFAQHAH
LSFGTINKADWWTANLNPGTVNCPVVVNIDAYEALSDDERAALDSSVDEAIAHYLTNYGALLKKWDDVLA
EKGVEKVMISDAVLEEFRAKVAGPISAKWVEDMTAQGLPGQELLDLVHATLKAARGS
>gi|56709023|ref|YP_165068.1| TRAP dicarboxylate transporter, DctQ subunit [Ruegeria pomeroyi DSS-3]
MAGHASVLQDGSALSRLDRALLRLERGLALISGLAVFSLMLLAVVSVGGRNAMNAPLPGYVDWIEQAMPL
IAFMGIAFVQREGGHIRMDLVIGQLKGRALWLFELISVLLILGLMMLLVWGSWAHFLRAFDMGAPLWSRD
SSIDIGIPLWPSKLLAPVAFSVLCLRLGLQVWGYGRAFVLGLEAPVAVPLIQDVAAQAAAEAEQLAGHDN
G
>gi|56709024|ref|YP_165069.1| TRAP transporter, DctM subunit [Ruegeria pomeroyi DSS-3]
MDSIDIGLWVTGGLLVLVLTGMRVAFAAALAGLVGLVWIFWAKFGYDPDRFGKALTVAVKTAGQVPHSKV
SSQALSLIPTFILIGYLAYYAGLTRALFEAAKRWMAWVPGGLAVSTVFATAGFAAVSGASVATSAVFARI
AIPEMLAIGYNKRFAAGVVAAAGTLASLIPPSAILVIYAIIVEQDVGKLLLAGFVPGAFSAVIYVALIVG
IAVVFKSVGPPVTGFTWRQRFASLPGALPIVFVVVIIISFVYNPFGGDAWGTPTEGGALGAFVVFCMAVF
RGMKWAEFKSALLETAKLTVMIFTIIWGVLIYVRFLGFADLPGAFSDWITSLQMSPMLILVCILLAYAVL
GMFMDAIGMLLLTLPVVYPAVMALNGGEAVSAADSAFGMSGPMCAIWFGILVVKMAEFCLITPPIGLNCF
VVAGVRPDLSVQDVFRGVMPFFVADAVTIALLVAFPQIVLWLPGQV
>gi|56709025|ref|YP_165070.1| gluconolactonase, putative [Ruegeria pomeroyi DSS-3]
MFGVLEGTGFETIELEFNACFIGHARVERLWTGARWSEGPAWFPAGRYLIWSDIPNNRIMRWDETDGSVS
EFRRPSNNSNGNTVDGQGRLVSCEHLARRVTRTEHDGEITVIAEAVAGKRLNSPNDVVVKSDGSIWFTDP
AYGIMMDYEGDRAESEIGACHVYRWDPETLRVTAVATDFVKPNGLAFSADEKSLFVSDTGGTHQEGGPAH
IRKLTLMPDGKGVSGGEVFAECSNGFFDGFRLDRDGRIWSSAADGVHCLNPEGRLIGKIHIPEIVGNLCF
GGAKLNRLFIAATSSLYAVYLNVNGLK
>gi|56709026|ref|YP_165071.1| LacI family transcription regulator [Ruegeria pomeroyi DSS-3]
MDSRKPGHRPVTMRDVAKAAGVSRMTVSRALKKDSPISSETRERILKVVKDMNYVPDQVAGSLTTKRSGF
VGLLLPSLNNLHFAQTAQSLTDVLEQGGLQLLLGYTAYSPEREEQLVETMLRRRPEAMVLSYDGHTEQTI
RLLQRASIPIVEIWEKPAHPIGHTVGFSNERAAYDMTNALLARGFRKIVFLGEKDDDWTRGAARRAGFKR
AMREAGLNPDQEIRLGAPPLSIEDGVAAAELILQEYPDTDCIFCVSDMPAFGLLSRLKSIGVAVPEQVSV
VGFGNFEVSRFASPEISTVRVDPIAIGRETGSLILRLLDPKQRSPQTAQHITLPPVLEFRPSLKNL
>gi|56709027|ref|YP_165072.1| aldehyde dehydrogenase family protein [Ruegeria pomeroyi DSS-3]
MINGKNLIDGVWVGSDNVAHSADLAGQSFALATKAQVNAACQAARRDFRAYSKTARGERAAFLRAIAEEI
DKLGDEITRTGMAETGLPEMRLIGERGRTTGQLRMFADLIEGTDYLDIRKDGALPDRAPLPRPDLRLTHK
AIGPVVVFGASNFPLAFSTAGGDTASALAAGCPVIVKGHSAHAGTADLVAQAIETAILACNMPKATFQML
QGSGREVGSALVQHPEITAVGFTGSLAGGRELYDQCHARPHPIPFYGELGSVNPMFCLPAAMDARAAEIG
AGWAASLTMGAGQFCTNPGIAVMVKGDPADALEAACVDALRKTPEQKMLTDGIHKAFESGVKGVSGLIEE
VAGCGTAKAARSGLPALFKVTARAWMANPILQQEIFGSAGIIVLCDDVAEMVELAEILEGQLTVTLHLDD
ADADLAAVLMPIVEEKAGRILANGFATGVEVCSSMMHGGPYPASTDVRATSVGTLAIARWLRPVSYQNIP
SALLPSELRE
>gi|56709028|ref|YP_165073.1| dihydrodipicolinate synthase family protein [Ruegeria pomeroyi DSS-3]
MSTRYTGIWPVAPTPFHDDGSLDLDGMKRVLDCLIDQGADGICILANFSEQFLISDAERETLTRLCLEHV
AGRVPMIVTISHFATQIAVERARFAKGLGADIVMMMPPYHGALLKGTAQQTFDQFKAVGEVGIPIMVQDA
PLSGVDLPVPLLVRMAQEIDMVRLFKIECPRAANKLRALIEQGGAAIEAPFDGEEAITLLADLDAGATGS
MTSGMIVDQIKPVLTHYHAGRLDEATAAYGRVAMAINHENRQCGWQSCKAAMVEGGVIRSDFCRHPIDPL
HPAIRARLIDLLRPLDPLVLNWGK
>gi|56709029|ref|YP_165074.1| galactonate dehydratase, putative [Ruegeria pomeroyi DSS-3]
MSKIKSVRTRVWNWTGPTVPPTGNFCTNASDVLWDKGDAMSSFRFHQWLTCEVETDDGTIGIGNAALAPT
VVKKAIDDWFAPMVIGEDPFDYAYLWEKMYRRSHAWGRKGIGMTAISAVDLAIWDLMGKLTGKPVFKLLG
GRTKEKIPVYYSKLYSGPIDTMQAEAEEARKNNYPGYKMRFGWGPKDGMAGMRENLKRVEAVREVIGYDV
DLMLECYQGWNLDYTKRMLPKLVKYEPRWLEEPVIADDVEGYRELNAMNIVPISGGEHEFSVIGCKDLIE
KKAVSVLQYDTNRVGGITAAQKINAIAEAFQVPVIPHAGQMHNYHLTMANANCMISEYFPVFDVEVGNEL
FYYIFEGDPAAVDGFLDLDDNIPGLGISITDKYLKHFEIQE
>gi|56709030|ref|YP_165075.1| 4-hydroxythreonine-4-phosphate dehydrogenase [Ruegeria pomeroyi DSS-3]
MSKPRIAIVPGDPSGIGPELIAKLLNDEGVLEAANVLLVGDRHLWEQGAAQAGQEVPLNSLDPRAIPIQT
GLAHLNMQTIDPSEISIGEVTVAGGTTSLRCLEKALDLAQAGLVDGVLFGPFNKAAMTAAGLNAEDEHKY
MARYLGFAGYHSEINVLDDLMTTRVTSHIGLKDVAANISQEGILRAVNLANDTLRKAGKARPRIAVAALN
PHAGDNGKFGREEIDILEPAVRQAQEKQLDVTGPWPSDTVFLKAKRGEVDAVVTMYHDQGQIAIKLMGFE
RGVTVAGGLPIPVATPAHGTAFDIAGQNKANVGATRQAFDLLVRMAKTHRADREAASGDTQ
>gi|56709031|ref|YP_165076.1| hypothetical protein SPOA0247 [Ruegeria pomeroyi DSS-3]
MSQTMMLIEKSSHCVSWYDTETGALQGRLALPDFPHEFVVDQDNHYAYVGHYGVQNSGVEGTDGRSVIVI
DIRKQEIVHRYDLGEHARPHGISLDAQGRLYVLSEWSGHLLVKENPRAFDQGWDHVTPVGGEKPHLFALT
GDGRTAYSMNLNSGDVTVLDPYDPTRIPVSIKTGEKPEGRCLREEAGVLYTSQRISNTVAVVDTKTLQVQ
RIFPTPQDPCRVYYDAKRNRLVTMNHHGGSFSVFDEATGEMLHEQKTPANPLALCIDDEAAYAYIAIDCE
QVQRFNLDTFEVVQTFDTGKEPDVMVILPEGYSKHWEVNA
>gi|56709032|ref|YP_165077.1| hypothetical protein SPOA0248 [Ruegeria pomeroyi DSS-3]
MENTIKTRALTHKGTMKMLEAAIAEAEKIGQPQCIVIVDASGELLAEVRMSGAKFLSRKSARSKALTASS
IGAPTTNIPEAVRPFIASATGGDVTGLPGGLPIISESTLLGGIGVGSGSGNQDIAVAKAALAAIGAETDF
A
>gi|56709033|ref|YP_165078.1| TRAP dicarboxylate transporter, DctP subunit [Ruegeria pomeroyi DSS-3]
MNTLKLLAGAAAALAMSLSAAAAETTLKLAHAAPETDLQQAMSLFFKEQVEARSNGSVKVNIFPSGQLGN
DAQMIDGTRAGIIDISMVGLNNYSGLMPESAAFTLPFMFPTRDAAYRVLDGDVGQGVLADMAQFGLKGLG
FPENGYRNMTNNRGPIKAPADVAGLQMRVNNSKALNDMFAELSANPQQIPVAELYTALETGVVDAQDHPI
GVTLSFKFYEVQKYLSMTRHAYSPLALTMNHKAFEGLSDDEQKIVLDVAKEAVDLQRKLSIEKEDGMIAD
LEAAGMTVNDDVDGAAFQAAITPVWDSFVAQHGDGLIKAILAASK
>gi|56709034|ref|YP_165079.1| TRAP dicarboxylate transporter, DctM subunit [Ruegeria pomeroyi DSS-3]
MTLALFLGVLLVSIFLGLPVAFALLLASIALMFQLDTFSTDILAQSLINGVDSFPLLAIPFFLVAGEVMS
AGGLSQRIVRLATSLVGHRRGGLGYVAIFTSILLAGLSGSAVADAAALVSILYPMMKKAGYPEGHSMGLL
ASGGIIAPVIPPSLPLILIGVAGGISIKSLFLGGIVPGLLMGLTLVLVWGVLMRKEDLEVAPRATAGERL
RAVREGFWALLLPVIIIGGIRFGVFTPTEAAVVAAVYAIFVSTLVYRELNLKALFHVLVSAGRATAMVMF
LVGCAMVAAWLITIAQLPQQLAAMLGPLVDHPRLLMAVIMLIVLAVGMVMDLAPTVLILVPLLMPVVKLA
GIDPVYFGLMFVINTSIGLITPPVGNVLNVVCGVGRVPMSAAVRGVAPFILAYLALLALFVVFPNIIITP
MKFIIG
>gi|56709035|ref|YP_165080.1| TRAP dicarboxylate transporter, DctQ subunit [Ruegeria pomeroyi DSS-3]
MRLRCNNTGASGVRVSKTRSVGRPIHMLNWLWKSLDWLIAGLTIGMIGLVFANVVLRYGFSSSLRPSVEL
SRLGLVWVVMMGAVVALRRNEHLAVTEFSETLFPRLVPALRRIGWVVILVCVSMLFVGSFNQMNANWGNI
SQLTGLPSALFYLAGALSGALMILISVVRIFSLQAFQHELGE
>gi|56709036|ref|YP_165081.1| LacI family transcription regulator [Ruegeria pomeroyi DSS-3]
MSLKKNKKIGHKVTLTDVGELAGVSAMTVSKVLRGTGRIPEETRKRVRLAAQELGYVTNQLASLLAGASS
NMVGVLIPTARDVVYSDILSAINSELRPAGLRTFIGESYFDSDVDFEQVSSFLSIRPAALILHGGITRKA
ETLKLLKKQHCPVIQIWDVENTDFDISIGPSHVEAGRLMAEHFLSLGLERVGYVGAEMELDICAAVRANS
FERTLNAHGVQLIRSVAEDLPRQAEGGEILTRRLLDHHPTIQGIHFLNDAMALGGMRVSFERGISVPDQL
KIGGFNATSYVHSVRTRLTTISMSYQNIGRKAAQGVIALYSGEQVPQIQVEPITLERGNST
>gi|56709037|ref|YP_165082.1| ribose ABC transporter, periplasmic ribose-binding protein [Ruegeria pomeroyi DSS-3]
MATSAFCAISSAALADGGQTKLPLLELPGIEDRDYWVPGEVNVEGKLEAMQAVVGAKAVPFAGTQAEPIQ
IAMIYPSADTSDFWARNYIAMTKRLEELGIQFETTEFASRQIEHSLQSTYANQVVQDADLYDFVIFGPSE
LAIQADNIDKMAASEGFSTFVWAFHTPLKDLKNQPDGWFDFSSAAGALTMCDYMLGRLGNDVTMAMNRGI
PGITDDQRSGDFKACVEEKGNWTTIYEHYGEYQREGGFEGTSLILQAYPEATVIHNANTAMAMGSVEAQI
SVGKEKEVFSTGWGGTGLELDAIRRGELDATPMRMGDDVGAATAEAIKAHLEGRSDELPFVFLGRITVAH
DQMSAEEIDALEAEAFRFSGVGALER
>gi|56709038|ref|YP_165083.1| ribose ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MTTTTTNLQSKTLMERLEPYLAIIGPMVMIFAILLFMGVAEPARYFRLSNLNLILLDAALYMPMAMAMTF
VITQRGIDLSIGSIAALSGILMAFLIKQYGFPAWVAMPLAIVLGATMGLINGLIITRFKVPDLIGTLAMD
LVYRGLALVIAKGLVLARFPDLITEMGRGQIPGFIPVPVVIGLLTMALGYWALTRTHFGRYTISIGSNPE
ASEMTGIAVDRHKIYAYVLMGASAALAGVMLTGKLNAIQATSAPYFNLHVIAAVVVGGTSLFGGRASMLG
SLAGVLLLSMMINALVTLRIEFFWQSVASGAVIVSSVALYTWMQKKDRDGSRSLLAGLRTSEAQKLMKFS
ALLIGLLILLLAVGAGLATDPKPTG
>gi|56709039|ref|YP_165084.1| sugar ABC transporter, ATP binding protein [Ruegeria pomeroyi DSS-3]
MSDQPLVRMRGITKRFGGVTALQDVDLEAYSGEVLAIVGDNGAGKSTLIKILTGVYQATEGEIFLDGKRL
EMSSHSDAIKVGIDAVYQTLALADHLTPANNMFLGNELTKRVLGIPMLDNRRMKSEATRILDERLGVRLR
SMDVQTDSLSGGQRQAVAIARAVYHEDLRLLVMDEPTAALGPQETARTLKLIKSLRDQGLAVILISHSLD
DVFEVADRVHVQRRGRAVGVVNTAQSSVQEVLGLIVGAQDAAA
>gi|56709040|ref|YP_165085.1| ribose ABC transporter, periplasmic ribose-binding protein [Ruegeria pomeroyi DSS-3]
MLKRTFMAVSTAALLSGLGVPVFAETPFDGPTTGPAAAEGKSIVVVAGDLKNGGILGVTNGVKEAVEAIG
WELRILDGAGSIQGRTAAIGQAMALRPDGIIINGFDAVEQQAALEGVVSASIPMVAWHSGPKIGCDAPGG
IFANVSTDAMTVSEVAAKWAMEEGGSNVGAVIFTDSTYQIAIDKADRIKETIEAMGGTVLEYVDTPIADT
SSRMGPLTTSLLQKYGDQWTHALAINDLYFDFMGPALASAGIKSADGPQAGSAGDGSEAAFQRIRSGNYQ
AITVAEPLNLQGWQLVDELNRAIQGEACSGYVTTPALVTKDGLEKLGESNQFDPDSPYRQAYQAIWGN
>gi|56709041|ref|YP_165086.1| ribose ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MQSLESNALEPTKAELKNASSRTRLLRLLPVYGLVILTAFLILLFSILLPNTFPTILNLRAIISDKAIIA
LLSLGAMIPMAAGRIDLTVGYGIVLWHILAISLQTLYGLPWPIAVALVLALGLLTGFLNGLLVEVAKIDS
FIATLGTGTVLYALALWHTGGRQMVGALPDSFYAINGTFVFGLPITGFYVLGITVAMWLVLEYTPVGRYL
YAIGANQRAAQLNGIPTRKFVIGAFMSSGFITAFAGVLLASKLRIGQASVGLEFLLPALVGAFLGSTTIK
PGRVNVWGTIIGVTILAVGISGIQQFGGSFWVEPMFNGVTLLIAIGIAGYAQRRKGAKK
>gi|56709042|ref|YP_165087.1| ribose ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MSGALQSNLFFDGIQKHFGGTYALRDVSLNIERGEIVALLGENGAGKSTLIKILGGIHKPDEGRVLIDGQ
AYEHRPGGFGERQSVAFIHQDLGMIEWMTVAENIALALGYSRKAGLISWRSVDAFAQQALDKVGCDIDPT
TRVQDLSRTEKSLVAIARALAVDCDFLVLDEPTASLPADEVERLFEALRPLKQQGVGMIYVSHRLDEIFQ
IADRVAVLRDGELVGMRSISHTTPEELVFMIVGRKTRQVIKPQAAPGDTILDVQELQVDAAGPVDFKLRR
NEIIGLVGLRGAGHEHVSRALFGCEPFSGSVSLNGQVPDLTSPQGALSSGIGLVARDRTAESVAMSLTIR
ENTFLNPAAVGRSLFSFLTPRQETALAEQIGSDVALSPNDQSMAIESLSGGNQQKVVIGRWLETKRQLLI
CEDPTAGVDVGAKAEIYALLNTALEEGVGIIVVSTDFEEVAAICHRAIVFSQGKIAGELTGTELTTENLI
QVASASNVATN
>gi|56709043|ref|YP_165088.1| LacI family transcription regulator [Ruegeria pomeroyi DSS-3]
MSSTQNKPNKNNKVSLAQIAKAAGVSKMTASRVLRDEGGFSESTRARVMAEIDRLGYVPNRLATVFAGDQ
RSTFVGVSIPELGNEIFAQVLEGIDRKLGAFGHQTVLGMTEHALEQEEKWLETVLSWQPAGLIVTGRSHT
PKSIQLLSGAGIPLVEIWDFNSSPLDMSVGLNHFDSGYSMGRYLTGLGYRQFGYVGTSHDTANAASARLA
GYAKVIGDSGGSLKKQLLLKDAPGFYTGYYGTEQLLAANSDVEVIYYQNDNMAVGGLNYCQKRGLSIPGD
IGIAGWGDLPIASILPYRLTSTAVPHLRIGMIAAEMVLSQINGEARRRSQDVGFTLIPGSTVRSQLE
>gi|56709044|ref|YP_165089.1| aldehyde dehydrogenase family protein [Ruegeria pomeroyi DSS-3]
MFKPHGRHLIAGKWVDGDDSFSSEPAHGPSHRFAVGRVADVDAAATAAENAFWSFASSTRAARADLLTAI
ADEIDACGGAITEIGTQESGLPEARLIGERGRTTGQLRLFATHILKGDYLDRRHDAALPDRQPLPRPDLR
MIQRPIGPVAVFGASNFPLAFSTAGGDTAAALAAGCPVVVKAHGAHPGTSEIVAEAVKAAIERCGFHPGV
FGLIQGGNRQVGAALVQHPLIKAVGFTGSLGGGRALFDLCAARPEPIPFFGELGSVNPMFIFAGALANRG
SAIAQGWAGSLTMGAGQFCTNPGVAVMLAGPNADAFAQSAAEALAQVAPQTMLTDGIAEAYRAGQRRMGA
ATGVRELLSTPCDQRSAAPSLYATTAKAWLANEELAEEVFGPLGMIVTADSVEEMLAIARDLQGQLTCTV
HVDAEDAAAATRFMPVLERKAGRILANGFPTGVEVSDTMVHGGPYPASTNFGATSVGTLSIRRFLRPVCY
QDMPEGLLPADL
>gi|56709045|ref|YP_165090.1| GntR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MGGKRAIKRQSLPDVIADDIRERILNGDLTEGMTIRQEALAEEYTVSRMPVREALKRLDAEGLVQLTNNL
GATVTKHSLDEISEIFDLRILIEVDLFRRAIPVMAKADIERCERILEAMESSYDADDVAKWGALNYKYHA
ALYAPARRSLTNDVLQRVNLQSDRYVRMHLSVMRQRDPARKEHRELLELAQAGKVDEACALLTRHISQTK
QNLLTLMAAKRASDTA
>gi|56709046|ref|YP_165091.1| oxidoreductase, FAD-binding [Ruegeria pomeroyi DSS-3]
MEGRDIIVVGAGIIGISTALRLQSCGFKVQVLDRAGVAGEASAASAGAFAFADVVPLATPGIMKKAPKWL
LDPLGPLSVPPAYALKIAPWMLRFWRASWRDRFAAALDAQARLNGFAKEALERQIAEVDGEPFMQRDGQL
QLYEGAREFHASLEGWEHRRRRGVMFVHLHSPEAIAEIQPGLAPRFTHAGYTPDWLNTVDPRRWAEHLAH
RFQQRGGVIGSADVRSIERHGAGAKLKTAAGDILASRVVVAAGAWSHHLARTLGDRFPLETERGYNTTLP
AGAFNLRTHLTFSGHGFVVSRINGGVRVGGAVELGGLDLPPNFKRADILLQKAARFLPGLTTQGGQRWMG
FRPSMPDSLPVIGASARLPNVVYAFGHGHLGLTQSAATAELVADLVSDRVPALPMAPYAPSRF
>gi|56709047|ref|YP_165092.1| TRAP transporter, DctM subunit [Ruegeria pomeroyi DSS-3]
MAPLLMFAALFVLVFAGVPVAFSLIIIAVVFGYTVFGDLIFLQLYGPLLSTASNFVLAAIPLFIFMGAVL
ERSGIARRLFHALQLWLGGFPGGLSLSTIAMCAIFAAASGVVGAVEIVVGLMAIPPMMKAGYRNDLIAGT
ICAGGSLGTIIPPSVIVVVYASIAQLSIGQLFAASIMPGFLMVVFFVGYILIRSLRNPADAPPLPIHDRA
IPLKEKMTISLTAMLPPLALIVMVLGSLLAGIASATEAAAVGAAGTLLLTLMFRELTLKLVMDSLGVTLR
ITAMIMLIVAGGTMFTSIFAVTGGGGLVRDAVESIGYGNFGIIAFFLTVVFFSGFVLDWVSIVLIFVPIF
APIVKSAGIDPIWFAMMVLVVIQTSYLTPPMAPSIFYLRSIAPRSMTYGQMYRGVLPFVGAQMLVLVVIV
FFPATVTWLPSILVGL
>gi|56709048|ref|YP_165093.1| TRAP transporter DctQ family protein [Ruegeria pomeroyi DSS-3]
MIPFQTLCERFSKALGFLGRMAIFSLIVAMLYEVVARYAFGAPTLWAFDISYMLNGSIFLLGAAYSLQED
AHVRIDFLSQRFPLRIQQLLNGAVYLLVMAPITFAFTWVAATKALKAFSTGEVESVSPWAPLVWPFYGVI
ALGLIAFALQFVVEALKYLSGQKQPGTAESEITELEI
>gi|56709049|ref|YP_165094.1| TRAP transporter DctP family protein [Ruegeria pomeroyi DSS-3]
MKISSFLTAGALALALSGPALAAEVEWKMTAGVGEGSFLYQNFMERFVGNVATLTQGRVEITSFGAGVLA
PAFKAYEVVQDGIVEAGHSTPSYLVNQDATNAIFASFPGGMSAEATLHWVYEGGGEEMLQTFRREEMGLH
SIVVGIGTSEIMAHSNVKIETVEDLAGLKYRTSGAFAAVLQNEFGGVPTVVPGNEIYTLLQRKGVDAIEW
STPGANITEGFHEVAPYMIMPGVHQPSFLWEVFVKQETWDALPADLQTLITAAAKLTTYEGYTRFGDSDV
KAMADFRNTNVELVVMARAESEKIREAGRNWAQTQAKTQSEAGSRRMQDILDSYLAYQSNWAANSGYLVR
DGAE
>gi|56709050|ref|YP_165095.1| proline racemase, putative [Ruegeria pomeroyi DSS-3]
MHVIDSHTGGEPTRVILSGGPHLGSGPLSERAARLARESRAFYRSVMLEPRGQPAMVGALLVEPVDPDCI
TGVIFFDAEAVLGMCGHGTIGLTVTLAHMGRIRAGTHKIETPVGIVEVCLSDANTVTITNIESRRVHRAR
QVDVDGFGPVTGDVAYGGNWFFIVDPSPIPIERTNIRALSDAALAIRTAVIANGIGGEEGQPIDHVIFYE
MSPRSAVHSRSFVFCPDGTYDRSPCGTGSSARLACLAAEGLLNAGEEIIQESVIGSTYRLSYQPGPNGGV
IPKITGQAHVMAESTLHFHTDDPYRNGICHAPQ
>gi|56709051|ref|YP_165096.1| dihydroxydipicolinate synthase family protein [Ruegeria pomeroyi DSS-3]
MSNIFTGTMPALMTPCRADRTPDFDALVRKGTEMIAAGMSAVVYCGSMGDWPLLSDEQRMEGVERLVKAG
IPVIVGTGAINTRSATAHAAHAQAVGAAGLMVIPRVLSRGSSLVAQKNHFKSILSAAPELPAVIYNSPVY
GFATRADLFFALRSEHPNLIGFKEFGGKDDLRYAAEHITSQDDQVTLMVGVDTEVFHGFVNCGATGSITG
IGSALPKEALLLASLSQKAAAGHPEARKRALELEDALGILSSFDEGTDLVLFYKYLLVLNGEEEYRLHFN
ETDALSDAQRNYCEQQYALFRTWFAEWSKQGGVLAECM
>gi|56709052|ref|YP_165097.1| IclR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MQERLIRLLEAIAGAANPPNATDLAQLTGLPRATIYRNISSLVDCGFVEVTDCGSRYVLGMRFVKIALTG
KSDMHVINAVSAMMQQVVKTSGETGFLARYRGGRVDLIHIETPADPSLSYIYPGLGPRPAHACSSAKAIA
AFITPELRDELLDIQPMRFNQNTITDPDQIQRELNQVRRYGYAICDGEIDEGVSSVAVPINVDRLGAIFS
MGVVGPSNRIKPMVQNRILPVLSAEAVRAAAAIQHCSVVDAETTNAEALADAREGLNKTH
>gi|56709053|ref|YP_165098.1| hypothetical protein SPOA0269 [Ruegeria pomeroyi DSS-3]
MKRREFGALAAGALAMGLPFRAFADETCQSPYMPKITGQEEFVYVWTLGVEGMGDEQDKLVTIDLRPGSA
TRGQVINSVSVGGRNEAHHGGFSADRRFFWTGGLDTNRIFIFDVHSDPSNPKLHKTIDTFVKDSGGVVGP
HTFFALPGSMMITGLSNDDDHGGRTALVEYNDDGEYVATYWMPTADDMQGAVAVGDAVADGYGYDIRALI
RKNVMLTSSFTGWSNYMMDFGQMLQDAEAMKRFGNTIVQWDLHTRQPKKVFNVPGAPLEIRFPWGSNANY
AFSTTALTSQLWLIYEDDAGEWQAKAVADIGNPADIPLPVDISIAADDQTLWINSFMDGKTRLFDISDPH
KPFQIYEKVIDRQVNMVSQSWDGKRVYFSSSLLANWDKKGKDDAQYLKAYNWDGKELVEDFAVDFYELGL
GRAHIMRFGSSALYSS
>gi|56709054|ref|YP_165099.1| hypothetical protein SPOA0270 [Ruegeria pomeroyi DSS-3]
MRKRFLLSGLTLVAAATVVGWQVWSPVPPARPSPMSSVFEASDAYQFDPPAPGSYRLNRIKRAPDGRVLD
IAGTEHSLHDLTRGKISLVSFVYLTCGDVNGCPLAMSVFFDVHDASGDLPGLNEDVQLLTISFDPARDTV
EAIEAFAYPITSDEQAGDKLNWQVLTTSGPQELRPILDGYGQVVDRSEDQETISHLLRLFLVDRQGDIRN
VYGLGFLDPRLLLTDIETLLMEEAGA
>gi|56709055|ref|YP_165100.1| methylamine utilization protein MauG, putative [Ruegeria pomeroyi DSS-3]
MIRALATVLALIAPAALAGDYGTALPAPISAETCPADPESWTKAALERSLTAQLGLPLVPHPADNPPTEA
KIELGRKLFFDRRLSINRTMSCAMCHVPEQGFANWELATAIGVEGRSVKRNAPSVINVGFLTPLFHDGRD
PALETQFVAPLVARNEMANPSIGHVVAELNRLPDYRRLFDAAFAAPASLDRIGQAFGAYQRSLTLGNSAF
DRWYYGGDETALDAAAQRGFALFSGTAGCASCHVIETDHALFTDQAFHDTGYGRMREERRQNPPASHPVQ
VAPGVVHQVDFSRIRSVSAPREADLGRYEVTEDPADRWTFRTPGLRNLAVTAPYMHDGALTTLGDVLEFY
NAGGAGHPGQDARIRPLGLSPDELADIQAFLMALTSEGLDCLVAEARSHPPDNF
>gi|56709056|ref|YP_165101.1| glutathione-dependent formaldehyde dehydrogenase [Ruegeria pomeroyi DSS-3]
MRTRAAVAVEAGKPLEVMEVNLEGPKAGEVLVEIKATGICHTDEFTLSGADPEGLFPAILGHEGAGVVLE
VGEGVTSLKPGDHVIPLYTPECRQCEYCLSGKTNLCQAIRTTQGKGLMPDGTTRFSMLDGTPILHYMGCS
TFSNHTVLPEIALAKVRPDAPFDKICYIGCGVTTGIGAVINTAKAEIGCRAVVFGLGGIGLNVIQGLRLA
GADQIVGVDLNPDKVAMATRFGMTDFVNPAEVEGDMVAHLVELTRGGADYSFDATGNVGVMRTALECAHK
GWGESIIIGVAPAGAEISTRPFQLVTGRVWKGTAFGGAKGRTDVPRIVDWYMDGKIEIDPMITHTLSLDE
INKGFDLMHAGESIRSVVVY
>gi|56709057|ref|YP_165102.1| DNA-binding protein, putative [Ruegeria pomeroyi DSS-3]
MSNSTDEDAELGQRLRVIRERAGLSQRALAKRSGIPNSTISLIEGGKINPSVSTLRRVLGGIPIGLSDFF
AFEPEQEKASFYAAEDLTEIGKGKLSLKQVGSNLVGRAMMILYETYQPGADTGRVMYGHEGEEGGVVLSG
RVEITVGSQRKILGPGDAYYFDSRAPHRFRQVGPETCTIVSACTPPTF
>gi|56709058|ref|YP_165103.1| 4-aminobutyrate aminotransferase [Ruegeria pomeroyi DSS-3]
MKNAEIARRRDAAIARGVGMQTQIYVERAAGSEVWDVEGNRYIDFAAGIAVVNTGHCHPRVMQAVRAQAE
AFTHTCHQVLPYESYIRLAERLNDRVPGDFDKKTVFVTTGAEAVENAIKIARAATGRPAVIAFGGAFHGR
TFMGMSLTGKVMPYKTGFGAMMPDVYHVPFPVELHGTTTDEALAGIAKLFKTDLDPGRVAAIIIEPVQGE
GGFYPAPAALMRGLRALCDSHGILLIADEVQTGFARTGHLFAMEGYDIAPDLTTMAKGLAGGLPLAAVTG
RAEVMDAAAPGGLGGTYGGNPLGIAAAHAVLDVIDEEDLCHRANELGSRLKQRLTQVRERVPEIVDVRGP
GFMIAAEFNTADGGAPNPDFANAVRAQALSRGLVLLTCGVFGNVIRFLAPLTIPEDVFAEALEILETSIL
AVKGG
>gi|56709059|ref|YP_165104.1| succinate-semialdehyde dehydrogenase [Ruegeria pomeroyi DSS-3]
MTTLALNDPGLLETRAYVNGVWIEGGARFAVQDPATGDLIAEVADLGAADTAAAIDAAHAAGPGWAALTG
KERGAILRRWHDLMIQNADDLATILTAEMGKPWAEARGEILYGASFLEWFAEEAKRVYGETIPGHQRDKR
IVVLKQPVGVVGSITPWNFPNAMIARKVAPALAVGCTFVARPAELTPLSALAMAVLAERAGVPAGVFNVI
PSQDAAGVGAELCANPKVAKITFTGSTRVGRLLMQQCAPTIKKMSLELGGNAPFIVFDDADLDAAVDGAM
IAKFRNNGQTCVCANRIYVQARVYDAFADKLAAKAAQLRVGNGFDTGVTTGPLINSAAVSKVEAHIADAL
AGGAEVVLGGTRAPLGGTFFAPTVLRDVTRDMLVCREETFGPLAALVRFESEDEVIDMANDSEFGLAAYF
YSRDLARVWRMAEALESGMVGVNTGLISTEVAPFGGIKQSGLGREGSRHGIEDYLELKYLCLGGIG
>gi|56709060|ref|YP_165105.1| fructokinase [Ruegeria pomeroyi DSS-3]
MILCCGEALIDMIAAPTIGGGHGFLPQPGGGALNTAIALGRLGQRVGLVTALSRDMFGQRLAEALTASHV
DLSGAARVDRPTTLAFVQLRDGQPEYAFYDENSAGRMLSATELPPLPPEASALCLGGISLACEPGADAYA
DLLERHGAGRVVLIDPNIRPALVGDEARYRARLGAMIARADILRLSDEDLGWLCPDAPDLRAGARTLLAL
GPALVVVTRGAAGATGYLPEGAEVSVPAPRVNVADTVGAGDTFIAGMLSALAEQGLLTPAALAGLRAEAL
KPALTHGARVAALAVSRPGANPPWAHELAPPPG
>gi|56709061|ref|YP_165106.1| alpha/beta fold family hydrolase [Ruegeria pomeroyi DSS-3]
MPGLPYLRAGSGPALVFVHGYLGGAAQWAQEIERFKDAFDVIAPNLPGFGAAADRPGCASIEEMAAAVLG
LLDELGIAEFLLVGHSMGGMIAQQMAADRPDAVKRLVLYGTGPLGLMPDRFEPIDTSRERLLADGVDCTI
RRIGATWFRAGAAAAAYPLLVEIGARANPQAAMAGLGAMAAWDGRAALPRLSMPTLVLWGDCDKSYRWPQ
IHTLWSNIPDARLSVVPGTSHAVHLEKPGFFHSILADFLTEP
>gi|56709062|ref|YP_165107.1| TRAP dicarboxylate transporter, DctM subunit [Ruegeria pomeroyi DSS-3]
MEWYVVGLGLLGLLMLFISIGLPIPFALAAASLPFLWQIQGWKTSIVSSELKLWGVWIDYILLAVPLFVF
LGELIGKSKIGPNLYQFLHQGVRLRGSAAYGSIGASAGFGAVCGSSMVGALTIGGVALPEMLRLGYGKRL
SSGVLAAGGTLSVLIPPSLILLFYGIVTDQSIGDLFIAGVIPGIILVSSFVVVVLIWGILRPEDIPGSED
AAKMPMRMIVATVGPVMLIGLVITVAIYAGIATPTEAAAVAASLTVLLAFWVGGLTWQGFKEAIFSTMRT
MGYLGLLLSAGVLFGFVLTYYRVPQQFTELFLSFDLSPYTVLAIVLVFYIILGMFLEPVSMTFITLPTIY
PLMSAAGFDLIWFGVVYTITMEIAVLTPPVGLNLYVIQAISRDQVTIGDVIMGCLPFIGAMILLIAVLIV
APDVALWLPEQMR
>gi|56709063|ref|YP_165108.1| TRAP dicarboxylate transporter, DctQ subunit [Ruegeria pomeroyi DSS-3]
MNDGIDRLIRGVERGVVWLAGLGAVIVLVQMVWITYGVFVRYGLGKPDRMVTEATALLLFPVAFAGLAFA
LREDAFPKVTMLTDQLRPGARRFFDILNHLLMLGVGGFFAYAGVSATIRSFNSGVASEILHWPRYMFWAP
GAVALVLFTLYTALRLIRLIMRPAPTGDL
>gi|56709064|ref|YP_165109.1| TRAP dicarboxylate transporter, DctP subunit, putative [Ruegeria pomeroyi DSS-3]
MYLNLKTATASALALACGLAAGTASAETTLRLSTYVNEADIRYAGFTHFADLVAEKTGGSVKVEVFPSAT
LHGWSEGVDSVQGGVSDISWINADNRLPCYAVTSLYPAEVSLEDQTGLDAAYAALIRDEAANAGLVPLFN
SNYSYDQEWWFEEPVADIGNLDGKLVRSIGPLVSMMIETWGGEPVFVAPKEVFQSAERGVVDGINMGVAT
YSSWKLWTVMPYMVNANLFYGNIQYMMNKAKFDALSADEQAALTAAAAETEAWLQPRYEAWVDQQVGNAV
MQGGGAAVSISDDQRASLIASVKPKWDETVNAACGGELADSIRALLASHAP
>gi|56709065|ref|YP_165110.1| LysR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MDINWLRDFTCLARTLNFTRASEERNITQSAFSRRIKSLENWLGIPLIKRSTYPVQLTEAGQQFLPVAQE
TIASLTDIRQVLRAQEQGVTAFQRFAVLHTISVNYLTRRIAEFEDLIPNLRVRVYSDNLRTCCQLLSDGT
CDFLLYYRHQDVQPVFEEKQFARKDIGVELMYPVAETGAARAGGWDLDGDGRQPIPYLSYDPSSFLGTVV
DQTIGTRTPPLAIRYMDALTEAIKRRVLSGSGMAWLPESVIAEELAAGRVTIIGGPDWQAPLTLSLFCSR
DRLDETGQKVWNAL
>gi|56709066|ref|YP_165111.1| malonyl-CoA synthase [Ruegeria pomeroyi DSS-3]
MANPLYDRLFGAHAGQDTPFLYLPDGRVISHAAFLGQAARLAHVATNLGLKPGDRVAAQVEKSPEALALY
AACAQAGLIFLPLNTAYTADELSYFIDNSGAALIVCDGRNRDMLAPIAEGLGARIETLNADGSGSLTERA
ATMPDRFDTVARGGGDLAAFLYTSGTTGRSKGAMLTQDNLLSNAETLAREWRFTADDVLLHALPIFHTHG
LFVATNIALITGGSMIFLPRFDLDQIIAQMPRATSMMGVPTFYTRLLGDARFTRELAQHMRLFVSGSAPL
LAETHVEFEERTGHRILERYGMTETNMNTSNPYEGARRAGTVGLPLPGVELKVTDPETGETLPQGEIGVI
EVRGPNVFKGYWQMPEKTAAELRADGFFITGDLGFVDEQGYVTIVGRGKDLIISGGFNIYPKELELLLDD
QPGVLESAVIGVPHPDFGETPLGLLVPRPGQTPDTQAIMATVETALARFKHPRKLIVLEELPRNTMGKVQ
KNILRDQFKALFEKQ
>gi|56709067|ref|YP_165112.1| GMC family oxidoreductase [Ruegeria pomeroyi DSS-3]
MDRFDFIIVGAGSAGCVLAERLSASGRHTVLLIEAGGSDRRFWVKVPLGYGKTYDDPSVNWCYTAQSDPG
LAGRAAFWPRGRVLGGSSSINAMAYVQGLPHDFDDWETAGATGWNWQAARDTYARIETRDRPGTDGRRQL
SGSGPVHVSDVGDRMHPFSEHFLSAAAQAGWPLLDDLNGPERTGIARLQGTVRNGRRWSAADAFLRPALK
RPNLFLVSNALVERVTLHDGAATGVEYRARGQLVRASATREVIVSAGAVNSPQLLQLSGLGPAALLQRHG
IAVARDLPQVGQGLQDHLGISYQFTATQPTLNNRLGNWPGKLAAGLRYLLTRGGPLSVPINQIGGFVPST
IGGRADMQVYCNPMSYSVRPDGKPDVAPMAGFLICAQPCRPSSRGAVTIRSADPRTPPDIRPNSLSTNED
CAMAIAAGRIAQRLARTPAIRAVTREGPDIAAMSDGDLLADFRQRAGSVYHASCTCRMGSSARDSVLDAR
LRVHGVAGLRVIDASSFPNVTSGNTNAPVMMLAARGAEMILQDH
>gi|56709068|ref|YP_165113.1| LysR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MKLPNPTWLRSFEAAARLGSFSAAADELGLTPAAVSQQMRLLEKQLKTTLFERLPRGVALTDMGKAYAQP
VRKGLDDIQVATAGLFGTTRRRQIKVRASISCAALVIAPRLHGFLASHPDIDVDLSTFVWANRFQDGISD
IDIRFGFGDWTDGRLTHLGHEFAIPVCSPDYLTGFGAAPRLDHLAALHIFTIHGSESDWPRLFAQMGLAP
PVAARVTRFDSSLMALQAISAGSGLAIVLESFAQPFLERGAAVAPVPDRLAIRPAHFLVERDGGERRDEV
RAFADWICTLFQGPRP
>gi|56709069|ref|YP_165114.1| carnitinyl-CoA dehydratase [Ruegeria pomeroyi DSS-3]
MSDSPVRTRRDGAIFEVTLDRPKANAIDLVTSRIMGEVFREFRDDTDLRVAILTGGGEKFFCPGWDLKAA
ADGDAVDGDYGVGGFGGLQELRDMNKPVIAAVNGIACGGGLELALSADMIIAADHATFALPEIRSGTVAD
AASVKLPKRIPYHIAMELLLTGRWFDADEAHRWGLVNEIVPGTQLMERAWDLARLLASGPPLVYAAIKEI
VREAEDAKFQDTMNKITKRQLRTVDVLYSSDDQLEGARAFAEKRDPVWKGR
>gi|56709070|ref|YP_165115.1| ThiJ/PfpI family protein [Ruegeria pomeroyi DSS-3]
MRKLAAVLFEGFEMLDYFGPLEMFAMFPDEIEIVAVAEHAAPVRASGGPAVMPDRVFADGADYDLLLVPG
GRGTRREVDNPVLLDWHVAASARAELVTSVCTGSALLARAGLLDGRAATTNKLAFDWVASQSDKVDWRAS
ARWVADGRFLTASGVSAGIDMSLDALARLLGPEAAEKAAHWAEYVANRDPENDPFARMDKM
>gi|56709071|ref|YP_165116.1| acyl-CoA synthetase, putative [Ruegeria pomeroyi DSS-3]
MSKGLSRMFQPRSIAVIGGGAWCRQVIVQCRRMGYGGAIWPVHPKAVEVEGYPAFARLEDLPGAPDAAFI
GINRHATIEAVALLSAMGAGGAVCFASGFSEALAEDETGGDLQAALVAAAGEMPILGPNCYGFVNALDGA
LLWPDQHGCSRVERGVAILTQSSNIAINLTMQQRGLPIAYVVTCGNMAQTGQARIAMALLDDPRVTAIGL
HIEGFGDLRDWEALAAKAHARGVPLVALKVGASEQAQQATVSHTASLAGSDAGAQALLDRLGIAPLRALP
DLLETLKLLHCNGPLTGVDIASISCSGGEASLIADMSVGSALRFPALTARQRQALRAALGPMVALSNPLD
YHTYIWRDAQAMAAAWSGMTGDGIALTFSIVDYPVTDPADWTCATQAALKVRAETGAPFAVVATLPELMP
ADVAAELMAGGVVPLMGLREALAAAEAAASLHAPDPVPVCLPGQEDATQLLDEGAAKAALAAHGLEVPRN
RTARADEAAQAVEGMCGPFAVKGVGLAHKSEHGAVRLGVPAADVARVAAEIGTPEVLIEEMVSDAVAELL
IGVIRDPAHGFVLTLGAGGVLTELMRDTVSLLVPAARADIAAALQRLRIAPLLAGYRGKPGADMDAILRA
VEAVQDYVLAHAGTLGEVEINPLLVAPDRAVAVDALIRLE
>gi|56709072|ref|YP_165117.1| acyl-CoA dehydrogenase [Ruegeria pomeroyi DSS-3]
MHFGLSEEQEMIVSTVRSFVEKEIYPHETEVERTGEVPKEIADEIKRKTIELGFYACNFPEEVGGAGLSH
LEFALVERELGRGSMALNHFFGRPQNILMACEGEQKERYLLPAVRGERMDALAMTEPGAGSDVRGMKCSA
VRDGGDWVVNGTKHFISGADHADFIIVFIATGEDMTPKGPKKRITAFLVDRGTPGFTIRDGYRSVSHRGY
KNMVLEFDDCRLPDAQVLGEVDGGFAVMNEWLYATRITVATMSVGRARRVFDYALNYAAEREQFGQAIGK
FQGVSFQIADMITEIDAADWLTLAAAWRLDQGLPANREIASAKVYASEMLARVTDTTLQIFGGMGLMDDF
PIERFWRDARVERIWDGTSEIQRHIISRDLLRPLGA
>gi|56709073|ref|YP_165118.1| AraC family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MLLFDNFSNHCLANTVEPMRAANMLSRRPLYAWRFLTPDGAPVHSSSGLQVAPHDRLAAGRGAMLLVMPS
YGFRTLDGWPTLRALRAAAQRYPVLAGLDTGSWLLARAGLLDGHRATIHWEELTRFAETFPQVETLRERF
VLDGPRITCSGAMAAFDLILHLIGRDHGQLLALEVAQLFMTRDSARSHDAPAGGGTRQVNRAVMVMQDTL
EQPLPIAEIARRAGCTQKTLETRMRAAFDATPQTVYRRLRLNLARKLVTETDLPVSEIATRCGYDNASAL
TRAFRARFGQPPRGLRANG
>gi|56709074|ref|YP_165119.1| hypothetical protein SPOA0290 [Ruegeria pomeroyi DSS-3]
MTRKPDPYDAAEGIAGPYDSDPVEEDDLWFLPAQEPGEDEVDPLFPTPRAAQPLLFDPLEWRAAQDALSA
DLADLALGFGALDERLRAGPRQWVQRLALLEVADLGWWAGDRIGAERLALWTGLRLGATSEDVQALARAG
WAVRRLSGGPAPDTGGWAEGLAGFLDRSGAEGDTVPETVADLGDVMAAAAALHPATRAAMLFHCWIMLGQ
GPSAGLEAAVMAARHGAAMGRGGALFLPLALSGPGALRGAGAAEQKLTAWLRGAAQAVTAALLHLDRVAA
WSARAIEKTSDLSGRTPPALIEVLTAWPMVTAPLAEAQSGASRAAVQRNLDLFARRGLVREVTGQGRYRV
WTAAV
>gi|56709075|ref|YP_165120.1| branched-chain amino acid aminotransferase, putative [Ruegeria pomeroyi DSS-3]
MTTPQPETAPRTTHDAEADARNRDILIYVDGDLVHRDEAKVSVYDSGFMLGDGMWEGMRLYDGEWAFFDA
HMDRLFNSCKAVALEIGKTPEEIRAILDRTAAANGMTGDAHCRLMITRGRKAKPFQHPGLSKWGPTIVAI
VEHSVPSERVQGTGIRLASVPQVRGLPHSQDPKFNSHSKLNCVIACLQAEQAGADEALMLDPHGFVNTTN
ACNFFIVRRGEVWTSTGDYCMNGVTRANVITLCREAGIPVFEKNFSLYEAYGADEAFLTGTFGAQTPVAE
IDGRVIGAGGGAGPVTRRLRALYKAMVAQNVAEQKARRG
>gi|56709076|ref|YP_165121.1| phosphatidylserine decarboxylase [Ruegeria pomeroyi DSS-3]
MKMRDTFLKPMHPEGRKFVGIFAAITVILFLIWSVLGWIGVGLTVWCYYFFRDPERVTPAREGLIVSPAD
GIVSMIEKSVPPAELGMPDQALTRISVFMSVFNCHVNRAPIAGRIAAIAYRPGKFFNASLDKASADNERN
SLCIEMADGRQIAVVQIAGLVARRIVCFSSTGDTLRTGERFGLIRFGSRLDVYLPEGVEPMVDLGQTMIA
GETVLADLQ
>gi|56709077|ref|YP_165122.1| CDP-diacylglycerol--serine O-phosphatidyltransferase [Ruegeria pomeroyi DSS-3]
MTDPLDNEEQSKVRLIHLLPNLLTIAAICAGLTAIRFGYEGNFEMAVRLVLVACVLDGLDGRVARFLNHS
TAVGAELDSLADFVNFGVAPVLILHSWALQDFSGIGWIAVLFYSICCVLRLARFNVSGRLDPKSAPSDFF
VGVPAPAGALLVLLPLVVSFAVSDMPVAPPAIVALHICVIGILMISRMPTYSFKNMAIDRSNAKFFLLGA
TILSAALLTYLWITLTFIILAYAGCLVWVYRSSRKLKKTKG
>gi|56709078|ref|YP_165123.1| phosphatidylethanolamine N-methyltransferase [Ruegeria pomeroyi DSS-3]
MELNAVKSSYARWAPIYDKTFGAITNVGRHAAVDYINAHDATELLEVGVGTGLSLPNYRPGLKVTGIDFS
EEMLAKARAKVESLGLGHVQSLRQMDARDLDFADASFDVVAAMHIISVVPEPERVMAEMARVCKPGGLIV
ITNHFARDSGMLARVERFAAPFANLLGWHPDFEISSVLKQPDLTVIERKSLPPMGMMTFLVLQKCE
>gi|56709079|ref|YP_165124.1| hydantoin racemase [Ruegeria pomeroyi DSS-3]
MKILVVNPNTTASMTNKIARAARAVARPDTEIVAATSQAGPASIQGFLDVATCVPGLLEEVARHKDVDAI
VIACFDDTGLDAVRTLVSVPVLGIGEAAYHAASMIANKFSVITTLSRSVPGLENNLMRYGLAQKCARVRA
TDIPVLKLEEGDPATLSKIRSEISASIAQDNTEAIVLGCAGMADLMAQLSAEFGLPVIDGVAAGVTFAEA
LVNNRLGTSKIGAYSRS
>gi|56709080|ref|YP_165125.1| branched-chain amino acid ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MTAMLDFKDVELYYDHVYALKGVSLHVNKGETVALIGANGAGKSSILRAITGLAKPKSGSVTFEQARVDG
TDPSAIVKRGIAMVPEGRRVFPFMSVKDNLLMGAFTRSDKADIQKTLDNILTRFPRLKERYTQAAGTLSG
GEQQMMVIGRALMAKPKLLLLDEPSLGIAPKLVQDIARSIVAINRDEGVSVLLVEQNSRMALSISHRAYA
MATGNVVIEGNSKELLHDDRIKAAYLGGEV
>gi|56709081|ref|YP_165126.1| branched-chain amino acid ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MSPLLQVRNVTKKYGGLTANNDVSFDVAENEILSVIGPNGAGKSTLFKMISSFTSTTSGEVLYRGERISN
LRPHIVARKGVVRTFQETTIFKSMTVRESVVVAQHLRAKASLAGYFLGSKAAKDDVSAFGKYADELLEFL
GMSEIANELASNLPQGNLRALGIAIGLATDPRVLLLDEPFAGMNHDETMNMVNLVRAVRDDRGVTVMLVE
HDMPAVMTISDRIVVLNFGEKIAEGTPAEIQNNEKVIEAYLGSVDDEIGM
>gi|56709082|ref|YP_165127.1| branched-chain amino acid ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MLGFSSKQLIGTGIFLFAIFIGVPLVIGATGRWDFYFTLTSVALLAIASAGVWLTFYIGRINIGQGAFAL
IGAYVSAILVVKAGWSFWITLPAAGLFAAIVAILVGLPILRLRGVYFAMITLVLTQVVTLTALALPITNG
AKGISNIPLPSGLSILGIPLIPDFGAMENTKLAFYLTACILMVATYAALYRLVNSRLGHLCRSMQQNEEL
ASSIGVNIAYIRIVIFAISSFFGGIGGAMFGAIAQSVYPSTFVVADSVNFMLNCFLGGLGYVFGPMLGTL
VLYFGWDLLFEIGKYQMLVYSMILIAVIRFLPNGLLSVRFDKGDKK
>gi|56709083|ref|YP_165128.1| branched-chain amino acid ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MEQILANGVYLGSQYAMIALGLTLIFALMNVLNFAHGQMYVIGGFVTYTFYGQWGIPFVLALVMSCVTLA
ILGALIEKFLFAPVIKGSAREESTMLLAAGIAFFLDALILLIFGEKQRGVPKIVDGVFNWDFRIIMPYDR
ILICVLAILSIVAFIGLMQYTKTGRALRALAQDRTAAQLMGVNVDRYSMIGFALGAMLAGLVGGLLVTIT
GVNLGMGGPTSIKAFMMVMIGGAGVISGAIWGGIILGFMEAIGLALLYQYGDITYLLIFVSLMIFLAIRP
QGLMGKPWG
>gi|56709084|ref|YP_165129.1| branched-chain amino acid ABC transporter, periplasmic branched-chain amino acid-binding protein [Ruegeria pomeroyi DSS-3]
MQRRSLMKAAMTAATLTAFGTTAALAENPVLKIGFVGVTSGPAAAWGISNQRSMETRAAWINETGGYTIG
GTTYDIEIVSFDDQKDPKRAIAGMERMAQEGIHYVVGPNVDDGAAAVRPVAEANGIMYFPYAFPKELYQA
PASNAVLGMVANYQSGPAIYKYLMEKEGVETVAFIAANESDPLSQRDGGVAAAEALGLKVVSSSVTYQVD
TTDFTPVLTPVMRTQPDLLVLSGVSPANAPQLIRSARELGFQGLISTETAQDAGVLAEGAGDLANGFISV
GGASTPELASPMMNEFVKRYTEMFGEYNDESNTKVYALEYILETLKANPAAIEDVAAFQATMDTFEAPNP
YMNGDATLRYVGMTSFGQRRQVAVPLVVNVYQDGAFETLFVAAVD
>gi|56709085|ref|YP_165130.1| GntR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MPSNPQQSSRATPDRPSGSDESVIVERIYKAVMEQRLAPKTKLSEARLCETFGVGRMRVRRALLLLSSQG
IIELQSNRGAYVACPDTAEANEVFAARMLIEPPLVRQLAQSSGNIDLTILTEHIALEDAARERKERTEII
RLSGEFHTKLAQATGNKFIFRMMRELVTRTSLIVGLFGSSENASCPDDEHNNILKAIQSQDPEMAETLLI
SHLNHIQNGLDMDMRQVPQDDLAAILGSD
>gi|56709086|ref|YP_165131.1| phage integrase family site specific recombinase [Ruegeria pomeroyi DSS-3]
MKPVRPQPATPPALSENDRQALNDLYVRGTPENTLRAYERDLLYLTAWKQLSFGAPLAWPEQHECALRFI
LDHSRDLGDATGPAREVAEALIARGLRRSLACPAPATLNRRIASWQAFHRMKNLDSPFDSPLLKQARAKA
RRAAARPTAPKSRNPITRPVLEQLLATCRGSRRDCRDRALLMLGWASGGRRRSEIASLRVEDVSLRDFAA
DGIAWLMLVETKTTRRGATPRLVLKGRAAQALVHWLEVSGIEDGPLFRPVSKSDRVLTRRLTPDAIYQIV
RHRLQLAGLPQDFASPHGLRSGFLTQAALDGAPIQAAMRLSLHRSVAQAQRYYDDVEIVENPATDLLG
>gi|56709087|ref|YP_165132.1| replication protein, putative [Ruegeria pomeroyi DSS-3]
MTRKRRIFDIDMPAMEDIPVGKVPDKVLDKHRRGPMATAISENADALRDRQETEDRIRAENDQLAHELVR
LKKEGLITDLVPLDAVHAERLTRDRAAGPDPELDELKTSIREIGLSNPIRVEKRADGGYELVQGMRRLSA
YRALYEETGDERFARIPAGILANAPTDDQYRRMVDENLIRKDISFAEMGALARAYAEDPANDCADVDKAV
SVLFKSASYTKRSYIRAFASLLMMLGKSLEHPNEIPRNVGVDLKRKLDGDPGLVRAVSSALLAQPGRSAA
DEVAILRGFAEGAGVPEPQARTAAPSGDKTRRAKTTFQISRPSGIAKCSASNGRIDLRYNLDFTRIDRQK
LEQAVAKLIDSLQED
>gi|56709088|ref|YP_165133.1| replication protein [Ruegeria pomeroyi DSS-3]
MYTHEDLSHLRNQSLKLQGWIRQQTFSPEMEKTLRRFSSWEVSELIFNVNQSTFRGKLVADPTLPGGEVE
PDGRQRWFSLEEVNELRRRLKINRKSLMPPRPAGKRAIRAAVANFKGGAGKSTVALHLAHAAALDGYRVL
VVDFDPQATLSHSMGLTDVAEDYTVWGIMARDLIRETERMNNRAAAAESGTTLPRRQLPASITGMGLGDL
RVGDFIKPSSWSTIDAIPSCANAAFVEFASAQYRHLNPEWSFFAAVSRYLDQIPDDAYDLILFDCPPAIG
YQSMNAVFAADMLYIPSGPGYWEYDSTTSFIGQLAEALEDLSHGFDGVLPTGKIGLPKTFAEIRFILTRY
EPGNALHQAMYEAFRKVFGHHVTDHPVEMTRAVEQSGRFLNSVYEMDYREMTRETWRRARGTFDNAYREF
REVMLSAWSKLEDDA
>gi|56709089|ref|YP_165134.1| hypothetical protein SPOA0305 [Ruegeria pomeroyi DSS-3]
MQIAKPVGRNASALKYDILSALAVHALAGDKHRQRLILRLSALITTRYNWQRNELSMGRDEIARLWSVDE
RTVKREMARLRTLGWVTVKRPGVRGRVSVYELDLKQMLLDTRTSWAVIGPDFEARLDETPQAETAGNVVP
LHVPPPLGESSDDPVWAQVQAALYGRDPELWSSWFQHLSEVERGGGRAVLMAPSRFMADYIAAQWSGRLL
AAYSRIDPSIRSIRIEAAG
>gi|56709090|ref|YP_165135.1| S1 RNA-binding domain-containing protein [Ruegeria pomeroyi DSS-3]
MDRIARTIAAEINARPEQVDAAVKLLDEGATVPFVARYRKEATGGLDDTQLRTLADRLTYLRELEARRET
ILGSIRDQGKLTDELSLMIARAETKAQLEDIYLPYKPKRRTKAMIARENGLEPLAEAILADRKAEPETLA
QAYLSEGVPTTKDALNGARDIVAERLTEDATLLGELRAFLHREAMLSAKVIEGQEQAGAKFSDYFAHSEK
WATTPSHRALAMLRAQKEGVVTLDIAPDAEGAARAETMVASRLETRGSGPGDAWLRKVAGWTWRVKLSLS
MMVDLMGDLRARAQEEAIQVFARNLKDLLFAAPAGARPTLGLDPGIRTGVKAAVVDATGKLVATDTLYPF
QPKNDLRGAQASIARLIAQHGIELIAIGNGTASRETERMVADTLKLLPSSVKAPTKVVVSEAGASVYSAS
ELAAREFPGLDVSLRGAVSIARRLQDPLAELVKIEPKSIGVGQYQHDVDQHRLGQMLEAVIEDVVNAVGV
DLNTASAPLLAHVSGLGPGLAEAIVAHRDMNGAFAARRDLLKVARLGPRAFEQCAGFLRIRDGKEPLDAS
AVHPEAYEVARRIVGACGRDIRQIMGHEGALKGLRAEQFVTESFGLPTVRDILAELEKPGRDPRPSFVTA
SFADGVEDITDLRPGMVLEGTVTNVAAFGAFVDIGVHQDGLVHVSQLADRFVKDPHEVVKTGQVIKVTVT
EIDVPRKRIGLSMRKDGGASARQEKPARSGGPRDRSPRGPMQSGPKGGGGSGALGAALQDALRKR
>gi|56709091|ref|YP_165136.1| sulphoacetaldehyde acetyltransferase, putative [Ruegeria pomeroyi DSS-3]
MTHINGGEAVYRVLKANGIDTVFGLLGGSMLELYDAMHKGREIAYVGARDERAAGHMADAWARMTGKPGV
VLGAQAGPGVVNIVTAVAEAHLAYSPMVVIAGAITRADQAKDTFQEVDQVALFAPICKRSVMVTDPSRLA
PMLEDAIRLANTGRRGPVVLHVPRDLFAEEIPAIYPKPLALARPGPAAPADVSAIAALLAGAVRPVIFAG
GGFKWGAGRDALTALAETLEVPVVASTGHADVMRHGHPWFAGQAGPRGNRVASRLTKEADVMVVLGARLG
FNSTFHSNDYVGAETRIAHVDVEGAAVGRYFPAEIAAQGDARLTAEALTEAGERPNCDAWRERFRADMDS
LLAERAEEALVETLPMHPRRALGELRNTLPEDAIVTLDTGNTCLQAADRLAHYAPMSLITPLDFGLVGFG
LAAAIGAKAAAPERPVVAIMGDGAVGYTMIEIQTAISHKLPITIVVLDNEAWGAEKAYQQEFYGGRLLGA
EIESPRFDKFAELCGGKGIWVDGPGGMGSALQEAIASGQTTVIQAKIDPGALMTLRKDLFKAPQKEAKA
>gi|56709092|ref|YP_165137.1| aminomethyl transferase family protein [Ruegeria pomeroyi DSS-3]
MSDTTRVTRVAIIGGGIMGVAAQFQLAENGWTDTILFEKAELTSGSTWHAAGQIAHAVGSRIAGWINKTS
IETYKRVEKETGQSIGWHEVGGFRIATTDDEVDWMKSIMGVGRLLDLPMDLVGPDEVAKGNPFYKVDNVK
AAVQTYEDGHIDPSGVTMALAAATRARGAKIERRNQVLGASRKGDMWCLRTEKGDVLAEHVVIAAGSYAN
QVGEWFGLKIPSVSCLHHYLVTDRVPEFEGRPELPVMRDNAFGGYIRQEQKSGLIGIYEGHVCPTVWEMP
KGAPWAAENELFEADYDSIGDFLMIAFDKMPILAELGIKRVVRGAITHTPDGGMLVGPSGAPNVWLSCGS
SIGLAWGGGAGKVLADWMVHGETSINTRSLDPRRYGDFASDHYIVERTKDEFMRRHDTPCPGKQFHSLRP
LNRHQLYDRLAAKGAVFGEIAGWERPRYFGDVGEVEQIGWGHQSWHENALAEAQATRATAGVIDLCAFAQ
FEITGTDAGKLLNRLSANRIPHKDGRMSLNHLLTEKGRFETEITIWRINENRYFTGSPITRANPDFAWIK
SHIRPGEDVQMVNRSADWGMLAMSGPASRRILSELTDADLSNAAFPWLSGQEITVAGVPCYALRVSFVGE
LGWELHALLNRIPELYDALFDVGSAHGLTDLGSYAFNGMRMEKAYRASGELTTDIGPFDVGLERFVVTEG
RDFIGKEALLQRDPEWELFYAELQSDDIDIHGGEPVFFRDQIVGLTTSGGYGYTLGKSLGWLFVRKGTPR
ADIAVRILNETYPVTIHDAPLFDPDNLRPKAED
>gi|56709093|ref|YP_165138.1| FAD dependent oxidoreductase/aminomethyl transferase [Ruegeria pomeroyi DSS-3]
MTLPSHARTVVIGGGVIGCSIAYHLAREGRKDIVVLERSKLTSGTTWHAAGLVRRLRPSATLTRLINYSI
DLYGELERETGQATGWTQTGSLTLATNTDRLTNIKRQVSLGRAFGLEAEVVDANRAQELWPLIEVDDVIG
AVWSPADGRVNPSDVALALSKGAKARGVHLFEDTAVTGLKKKGGRISAVEVGEHVIEAEEVVIACGLWSR
EVAAMAGAHMPLYACEHYYILTKPLAEVQALGPGAHLPTLNDQDAYLYARDDVEGLLVGSFEPHAKGIST
KDLPANFSFDLLDEDWDHFMPMMENALRRIPALETAEVRKLLNGPESFTLDSQFMLGESPEVPGLFLMGG
MNSTGIALAGGAGRAMAEWIIAGEPTMELNEADIRRFSPEMDVLGALEARIPEVLGRHYDNPYPGRAMDT
ARGQRRSPVHEGLVAAGARFEARGGWERALHFGGDEAHLPLTFGIPKWRDQVAREVDACRNGAAILDQSA
FGKIMVQGPDACTFLNRLCAAQMDIAEGRIAYTQILNARGGVESDLTVQRHGPETYLMIVGAGEVVRDMK
RMRETRGDFRVEFTDVTSGYAAIGLAGTKAREVLQATTNTPVPDLKRFRFAPVEIGLARGWAGRLSFTGE
EGYELYVPSDMAMAAHEALVAAGATHAGLFASGSLRIESGFRAFGHELTPGTTPQEAGLGAFCAFGTGFV
GQGALANAGSPKRRVVSLLFDDPNAMPIHDEPIYYDGRVVGQITSAAWSYRFGRSVALAMINAPLDLIAT
QDVVTGFEVEIACTRFAASVSVKPAKEAF
>gi|56709094|ref|YP_165139.1| glutamate-1-semialdehyde 2,1-aminomutase, putative [Ruegeria pomeroyi DSS-3]
MMNQDLSTRARASLPGGVSHELRYRDPYPVFIDRAQGGEKWDVEGRRYIDFKMGSASQMLGHCHPAIVEA
IQKQAERSVFSADCHTREIEWAEWVNRLYPSADRTRFTASGTESTMLALRLGRAYSGKDHVLRVEGHFHG
WHDHALKGAKPGSDQVPSLGIPDAINDLIHICAADPQAMESALQDDRIGTVIIEASGANYGCVPLATDTL
RALHDVVRAAGVVLIFDEIITGFRWSPGGRQARDGIVPDLTTLAKVVTGGLPGGAICGRADIMELLNNAT
VRNGFGPAVSHKGTFNGSPLIAAAACAAMPLLANGEAQAQADAMAERMRDGMNAAMKRQGVAGIAYGDSS
IFHVFFGRDRLDGLGPAEIRGLPKPLVKAYRDGMLSRGVDMMAYTSGLTSSAHTPELIDEALLAFDDTLS
EMIRDGALT
>gi|56709095|ref|YP_165140.1| trimethylamine methyltransferase family protein [Ruegeria pomeroyi DSS-3]
MTKTNRRRGRKDRLKQVSEPDPQPPVWPGVVGGRLKPLSPDEESLVEEAAFKLLEDLGLSQAIPSMIEKV
TTAGGTMTDDGRLLFPRTLVKWAIDGAQRGFTLCGQRPENDLKIEAARVHMSTGGAAPGVFDLDTHAYRD
STLQDLYDAARIVDRMDNIHHFSRPVVARDIESNALMDLNTAYACLAGTSKHVSISVTEPRNVADIARLC
YAVAGGEAAFRARPFLTEMVCHVVPPMRFAEEACEVLELAIKAGFPVQLISAGQAGATSPATIAGSLVQA
VAETLAGLVFARLVDPEAKAIFAPKPLVADLRTGSMSGGGGEQAILMAGAAQMGRRWDLPTSSIAGITDA
KRLDAQYGAEKSLAVAMAAHAGSNIITQAAGMMSSLLGVSHAAYVTDNDMLGNILRTVRGIEATPENIAA
DVIAGVCRGVGHYLGEQHTFSRMKSDYFYPEIGDRRAPRDWQDNGAKRIGDVAREKTREILSGYFPSHLP
DDVDRALRKDFDIRLTRAQIGRPA
>gi|56709096|ref|YP_165141.1| LysR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MTASLTALRAFDAAARNGSFRAAAADLNVTPTAISHHIRGLEDQLGVKLFRREGRDVALTDDGRRLADAT
NQAFGLLDNAVQSLRRSARKAVRVSAGPIFTARWLMPRISDFWEAHREIELEVVPAIHPGARDRENVDIV
IRWDRIADMGRDAVKLLELSPVAIASEDFVAKRGPIDHPKDLLILPLLHQRNHWGWLDWFEAMGVSLADP
LYGPIFEDANVLLRGAAEGQGAIIGWLPLIDQDLAEKRVVRVFDERIAPTHGYFVDVQHNSRARVEVRAV
EDWLISQS
>gi|56709097|ref|YP_165142.1| isocitrate dehydrogenase, NADP-dependent [Ruegeria pomeroyi DSS-3]
MAEKMNSDILYTIVDEAPELASASFLPIIRKFVSAADITVGTPDISLAGRIIATFPENLTADQRQSDDLA
ALGELVKTPTANVIKLPNISASVPQLVAAIEELQNQGYDIPSYPEAPATDAEKDIRARYDAIKGSAVNPV
LREGNSDRRSAKAVKSYAQKNPHSMGEWVSTSKTKVSSMPGNDFYANEKSATITAAQAGKARIEFIGADG
SVSELKKNWQLDEGTVADATFMSVKALGAFLAEAIEDTKADGTMFSLHMKATMMKVSDPIIFGHAVKAWL
APVFEQYGDRMAALGVNPNSGLGDLLERVKGDAEILAAIEAVKADRPAMYMVDSDKGITNLHVPSDVIID
ASMPAVIRAGGKGWDQTGAKGDTNCVIPDRCYATVYDETINFFKANGALDVTTAGSVANVGLMAQKAEEY
GSHPTTFEAPANGTIRIVLANGDVLHSHAVEAGDIWRACTVKKAPIENWIQLAMDRQRLTGSEAIFWLDA
NRAHDAQLIAYVKPVLEAAGVADKFQILAPREATAQSLKTITAGKDSIAITGNVLRDYLTDLFPILELGT
SAKMLSIVKLMQGGGLFETGAGGSAPKHVQQLVEENHLRWDSMGEFCALGESLNFLADSRGNAKAGVLGR
AAEAATQGILDFNRSPSRKVGQPDNRDSHYWFARYWAEALAAQSDDADLAAEFAPLANALADGEQAILTE
LAAAQGKAADIGGYYKPSADLKAAIMRPSATLNAIIG
>gi|56709098|ref|YP_165143.1| amidohydrolase domain-containing protein [Ruegeria pomeroyi DSS-3]
MPNDTHAQTGASGPTTLFTNANVLTVDAEFSTAQAIAIRGNRILAVGSDAEVRAAAGDDATVVDLEGKTV
LPGFIDAHAHAVSGSVVDAIMDYVGMARFTTVDEVLNHIATRAAKTPAGDWLVFRNFDPAVQEGADALTF
AELDPISTDHPIFILNASGHLAYANSRAFEVSGLTNDVPNPPGGEFVRDADGNLTGTIKNNVAFLQIAEN
YPAMKQVNPVEGLLGLLGKWSQQGLTTVSELSLGALAQSPADVQVMAAAAQSGRMTARLRAYPFYTLGTE
TWDNAGVKQGDGNALARVAGYKLVADGSNQGFTGLQREPYLNREDRGLAYMEPDELTTTALERAGKGWHL
AIHGNGDAAIDNILDTCQALADAGIDMARVRPRIEHCSILHDEQIARMKALGVSASFLIGHVHYWGVAMR
DQVFGLEKAQLLDRCKSVEEAGVGFTLHSDFMVTDPNPLHMIEMAVTRRTWKEPDYVLAPQERISVDSAI
RAMTSEAAWQLFSDHEIGSLEPGKLADMVILDQDPRKVAPDEIKAIKVLETWMDGQRVFAA
>gi|56709099|ref|YP_165144.1| AsnC family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MDSKDRQIIRALQQDGRMTNQDLAEKVSLSPSPCLRRLRNLEKSGAIRGFSVDVDPAAYGLPITVFVRIR
LERHNQEDVHRFETRVRQIDEVLECHIMTGAMDYQLRVVVSDLDAYERFIRTRIHPIGGIASIDTSFVYS
TVKKTAVFPRLG
>gi|56709100|ref|YP_165145.1| methionine gamma-lyase [Ruegeria pomeroyi DSS-3]
MTHAKGFASRAIHHAYDPLDHEGALTPPLHLTSTFAFETAEAGGEMFAGERQGHIYSRISNPTLDLLEQR
IATLEGAEAGLALSSGMGAITAVLWTLLSPGDEVIVDKTLYGCTFSYMRHGLAKWGVTITHVDLTDPENL
KTAISDKTRVVYFETPANPNMRLVDIAAVSEIAHGASASVVVDNTYATPYLTRPIEMGADIVLHSATKYL
GGHGDVVAGLVVGGAEQISEIRLYGMKDMTGAVMAPFNAMLILRGLKTLALRMDRHCASAQVVAEWLAAH
PAVGEVHFPGLTSFSQHALANQQMAQPGAMIAFELKGGMDAGRAMMNRLNMIARAVSLGDAETLIQHPAS
MTHSTYTPEERAEHGISDGLVRLSVGLEEVEDILADLAQSLDAPQVQAAA
>gi|56709101|ref|YP_165146.1| transketolase, putative [Ruegeria pomeroyi DSS-3]
MSTPQDLSHLKTIEQRILWLSHWMIHHANHIRPKVDGIKIGGHQASSASMVSIMTALYFSTLRPEDRVAV
KPHASPVFHAIQYLMGNLDRARMENFRGYGGVQSYPSRTKDVDDVDFSTGSVGLGVAVTAFAALVQDYIA
AKDWGQGAPMGRMVALVGDAELDEGNVYETLQEGWKNDLRNCWWIIDYNRQSLDGIVREGLFERVEKIFD
AFGWDVVRIKYGALQRAAFQEPGGDALRDWIDACPNQQYSALTFMGGAVWRKRLMEDLGDQGPVSALLDR
RSDDELAELMENLGGNCVATMAETFAAIDHDRPTCFLAYTVKGWGTPIAGHKDNHGGLMNKTQFAAWQAH
MGVPEGQEWEPLATVADPAALRAFLDGVPFFAKGRRRFSDARLAVPGIEIASDREISTQAAFGKVLDDLS
KGDSELAARIVTTSPDVTGTTNLGPWVNRRKLFARKDQADAFIEHKIPSTAKWEFTPKGQHIELGIAEMN
LMLLLGAAGLSHSLFGKRLIPVGTVYDPFVARGLDALNYACYQDARFLLVGTPSGVTLAPEGGAHQSIGS
PLIGMSQDGLAAFEPAFADELAVIMEWAFDYLQRDGEGDPDERTWLRDETGGSVYLRLSTNPIEQPGKRV
DDAFRQGAIDGAYWLRKPGPNAEVVIAYQGAVAPEAIRAAGLLGEARRDVGVLAVTSADRLNAGWSAAQR
ARARDNPAALSHIERLMGELPPHCRLVTVIDGHPATLGWLGSVAGHRTIPLGVEHFGQTGTIGDLYRHFG
IDAGAIVERVEGLTSGRPGQPARLVG
>gi|56709102|ref|YP_165147.1| 5-carboxymethyl-2-hydroxymuconate delta isomerase [Ruegeria pomeroyi DSS-3]
MPHFIVEYSGNLEDALDIGALCEVIRATAAGIDTFPMPGIRVRAFRADHWAIADGDPKHGFIDISIRLRA
GRAPEVKQAAAAEVFEAVRAFVAPVMAQRSLALSLEMRDIDPDLSPKTGSIRDHL
>gi|56709103|ref|YP_165148.1| glyoxalase family protein [Ruegeria pomeroyi DSS-3]
MPRFPRIDAVYETHLPVRDLDRAVTFYRDVLGLELAHRHAARGLAFLWVGGQQTGMLGLWQAGSAPMRMV
LHMAFRLELEAVLAVPAALTAAGVDPLGFDGDPVSEAVVIGWMPALTVYCKDPDGHSIEFLCPLPDAPDP
DFGIGPWSRWRQR
>gi|56709104|ref|YP_165149.1| hypothetical protein SPOA0322 [Ruegeria pomeroyi DSS-3]
MDKTQSYDIFLIAPPGLEQVLAEEATACGFDEPRVVPGGVETRGPWSEVMRANLVLRGAGRVLVRIGGFP
AVHLAQLDKRARKFAWGDFLRPDRPIRVEAVSRKSKIYHAGAAKQRVERAITEELGAPISDEAEIRLMLR
IERDFCTFSIDTSGEALHKRGHKEAVGKAPMRETMAALFLRQCGFDGAEPVLDPMCGSGSFVIEAAEWAA
GLMPGRSRSFAFEQLAGFDAAQWQSMRNAAGAGGRPESLYSGSDRNAGAIDASRANATRAGVADFCAFHQ
RPVSDIRPPEGRPGLVIVNPPYGARIGDQARLRSLYGSLGKVLMDRFSGWRVGLITSEMSLARSTRLPFQ
APGPVVDHGGIKVRLYQSVRLR
>gi|56709105|ref|YP_165150.1| cyclic nucleotide-binding protein [Ruegeria pomeroyi DSS-3]
MAHEAQKAIARNSLLIRSLPEQHVDALLSQAVWRSYDRGETLFLQEEKAQAIHVVIDGWVKLFRMTPTGS
EAVVSVFTRGESFGEAVALRNTPYPVSAEAVTPCEVMHIPSPVFVSLMRRDPEICISILATTFGHLHSLV
AQLEQLKAQTGAQRVAEFLLELCDCDTGACEVTLPYDKMLIAGRLGMKPESLSRAFSRLKAAGVTVKRNH
AEIEDIALLRDYAESDPADSWSKS
>gi|56709106|ref|YP_165151.1| hypothetical protein SPOA0324 [Ruegeria pomeroyi DSS-3]
MTSRVQVVLAAIDSANSADPRLDEGRPEAQLYGERMSAELARLVPDAADVLQIAARGQHVERWKLARATY
PEGRAGYLAWRRAQAVHHAEVVGRLMSEAGYGAEEIETAGRMLRKQGIKRDPLVQALEDVICFVFLRWYF
APFAAKHSPEKVQDIVEKTARKMSAPARARVLEEFDLPADLATAFAG
>gi|56709107|ref|YP_165152.1| 2-nitropropane dioxygenase family oxidoreductase [Ruegeria pomeroyi DSS-3]
MYRNSLMERLALDHPIIQAPMAGGGDTPEMVMAVGKAGGLGSMGVSYLQPDRISANATRVREGSNAGFAV
NLFAPLDPPPPPADPGPALDFVRPHYQALGITPPGTVNGAEFDFEAQVEQVLDSGASVFSFAFGIMPEHV
IERARQRGMLVMGTATSVAEAQALEAAGVDAVIAQGAEAGGHRAGFGADLTRAMVGTMALVPQVVSAVGV
PVVASGGITDGRGIAAALALGASAAQMGTAFLTTTEAGIPEAHKQAILDAKETDTTLTRAFSGRPARGIR
NRVIADGEAMPDRLLDFPYQNALTRTLRAEAAKQQNPDFLSLWAGQGLGLARRLSAAELMQHLIEEMRAA
LASAARYG
>gi|56709108|ref|YP_165153.1| LysR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MDIADLRFFDCVARVGNMNRAAAELNTVQSNVTARIRNLEHDLGVVLFHRHSRGVEVTAAGEVLLPYARQ
VMTLLGDARKAVTQDGAPEGPLSLGALETVLALHLAPVLSEFAGAHPAVDLSIQTGTSRELVEMVLAHGV
EGALVCGPVAHPDLEATPVFREDLCIVARRDGRSLDQVLGAPGVRQLVLRLGCSYRQRLEDVLARRGVVG
VRTLEFGTLDAIRAGVAAGVGITLMPRRLVTRVWGEAGLALHPLEPGEGLVTTDYIRRKSSYVSPAQQAF
LDALTRDPPIRMAG
>gi|56709109|ref|YP_165154.1| rzcC protein, putative [Ruegeria pomeroyi DSS-3]
MIESETLAESQAGTRAPEPDFEPEVLAKIEKLRDHIRDSFGKVAMAMMAIPRYRNQSLADLNHLVLDPLT
RDRLAIACAPKSKGKLGDVAGFAIWASVSEPVDAKSREQTKAGTFPIRLKAEDWTSGAINWLLDVIAPDP
KTTAQVIANFGQLLKGGDLRMPPIVARLVDKETLEKLGATPQAPSQTA
>gi|56709110|ref|YP_165155.1| hypothetical protein SPOA0328 [Ruegeria pomeroyi DSS-3]
MHYWVLGQQNTGEYSGSLNPLDGDLGHVELVDTSIDIGIKPIMQSLVMTAGRRVKPERLPRKVSHDMSAD
RIDDLAMVHTYLTVSEPLRTLIEQFAPGDVQYEPFDVVGKRDGAFQQRRYWFIPTVRLHAMDKDKTRPPL
ADIGYFRQSTPLEDQHIVFDASVTDNRAIFASAEYPGILFVSDALVEAIEASGLTGARFRRRFASTASEL
L
>gi|56709111|ref|YP_165156.1| methylglyoxal synthase [Ruegeria pomeroyi DSS-3]
MLKSKPKNIALIAHDLKKRSLATWVFNNQTKLKRHNILATATTGGIIQKHCPQLRIRVTKSGPLGGDQQI
GAMIADDGIDLLIFFTDPLSPHPHDVDVKALSRLAVVYDVPMACSGATADLIAASGYLD
>gi|56709112|ref|YP_165157.1| 2-dehydro-3-deoxyphosphogluconate aldolase [Ruegeria pomeroyi DSS-3]
MDSPRNLKSSRIIEICRLCPVIPVLEVEQIEQATPLAQALIAGRLRVLEVTLRTDCALSAISEMSRVPNA
IVGAGTLRTPEDVRAAKQAGASFGVSPGATDRLLDACEETGLPLLPGAASASEVMTLLEKGYTAQKFFPA
EASGGRAALRSFGGPLPLVKFCPTGGITPEKATHYLELGNVMCVGGSWIAPTSLLRSGNWAEIETRARHA
SQLGGQASC
>gi|56709113|ref|YP_165158.1| 2-dehydro-3-deoxygluconokinase, putative [Ruegeria pomeroyi DSS-3]
MSNAELVCVGEPLFELSNVGPGKWNAGVGGDVSNVAVAAARQGTRSTMLTQLGDDDFAAEIRNSWAAEGV
NDAYVRTLVGAETGMYFITHDAGEHKFEYRRSGSAASQVRPEDLSEGVFDNAAIVHLSGISQAISASARA
TTDKAIAIAKKKGVKVSYDPNLRLKLWPLEEARKVILDTVRKVDIFLPGLDDARILTGIEEPVDIVRFFA
DLGAPIIALTMGDRGVLAANDGDMRFISSPKVDAVDATGAGDCFDGAFLSQLINEYSVFDAAAYAATAAA
ISIQGHGAAKSIPNREAVLALQEQCRGEIWTAPEI
>gi|56709114|ref|YP_165159.1| dihydroxy-acid dehydratase [Ruegeria pomeroyi DSS-3]
MTDFQKKKLRSQDWFNNLEDPEMTALYLERYLNYGLTIEELTSGRPIIAIAQTGSDLSPCNRHHVTLAQR
TREAIRTAGGIALEIPVHPIQETGKRPTAMLDRNLAYLSLVETLFGYPIDGVVLTIGCDKTTPALLMAAA
TVNIPAIALSVGPMLNGWHEGERAGSGTAIWMARQKFAAGEIDAKGFLEIAAASAPSVGYCNTMGTASTM
NSLAEVLGMQLPGAAAIPAPYRERGQMAYATGLRIVEMVHEDLRPSDIMTREALENAIVLGSAIGGSTNA
PIHLNAIARHLGIHLTNDDWERLGFNIPLLVNMQPAGAYLGEDFYRAGGVPAVVSELLEVGRIPHPAAKG
ANGKTLAENYAGIKATNSDVIRPVDRALMRNAGFLNLKGNLFDSALMKTSVIDAAFRERYLSNPEDPEAF
EGRAIVFDGPEDFHARIDNPALKLDANCILVMRGAGPKGYPGGAEVVNMRPPSYLIKQGVRALPCIGDGR
QSGTSGSASILNASPEAADGGGLALLQTGDRIRVDLGKRSVNVLLSDEEMARRRERLDAAGGFPIPQSQS
PWQDIFRQSVTQFSEGMVLKQATEHQDIARKHTLRNNH
>gi|56709115|ref|YP_165160.1| TRAP dicarboxylate transporter, DctM subunit [Ruegeria pomeroyi DSS-3]
MFVMLLGLLLTGMPLAFVTLLVALIFALGWFGPMAVPLITSRIFSFVNSFVFVSVPMFVLMASILDRSGI
AKDLFDAMRVVGGRLRGGVAIQTLLVAVVLAAMSGIIGGEVVLLGLLALPQMLRLGYDRRLAIGVCCAGG
ALGTMIPPSIVLIIYGLTASVSIGDLFTASFLPGLMLASFYIAYVLIRAYLNPDIAPIPEPDEIPTKEKL
RLLKGLILPILVVFMVLGSIYGGIASVTEASAMGVLGVALSAVIRGEFNWELLKGASLQTLSTVGMIVWI
GIGATALVGVFNLMGGINFVSGLIIGVSDNPTVIVLVMMLILFVLGMFLDWVGIALLTMPIFVPIIRELG
LDPVWFGVVFAMNMQVSFLSPPFGPAAFYLKSVAPEGISLGEIFRSLLPFIAMQVLALAILIAFPGVTGR
W
>gi|56709116|ref|YP_165161.1| TRAP dicarboxylate family transporter DctQ subunit [Ruegeria pomeroyi DSS-3]
MASDSHDFTNERAGPTSAPPEAGTLGKIIDRLGIVFAIAILSSAAILNVEVVLRYAFNSATIWAHETVIF
LTASSFVFGGLYVAARNAHIRVVLIYDLLNIKMRRLFDVVISVICSFSCAFFAWASWQSVSRAVWTPEGH
IRIETTGSAWDPPTAGLIKIFLFIVLILLCVQFAVLAFNYFRKRDG
>gi|56709117|ref|YP_165162.1| TRAP dicarboxylate family transporter DctP subunit [Ruegeria pomeroyi DSS-3]
MRRYISQLIATAVFGAALAGSAAAQEYSFRFQSSDPAGNANFILQKSWAEDVRERTGGKVAIELLPVNTI
VAHTETQDAVAAGIIDGHFTDTSYFAGKEPAFGLIANPVGAWSDPQQMFDFMENGGGKELMNSLVEPYGL
HFIGATTPGLEAFVSKVPLDGVDDLKGIKMRAPEGMVQRVFAAAGAVPVNLPGSEVFTSLDKGVIDAADY
TVFSTNHEQGMHDIAKHPVYPGFHSMPLVEVSMNKTTWESLPADIQATLEQSVSDFARRQVSTLAERDAV
AVAAAAADGVTVHDWSAEERARFRAIAKGEWEAAAGASDASARVYSTLTKYLSDNGLLE
>gi|56709118|ref|YP_165163.1| LacI family transcription regulator [Ruegeria pomeroyi DSS-3]
MRKAEKKSSITLVDVAREAGVSAITVSRVIRTPHVVSERSRRKVEAAVEKLGYVPDAAASALASNRTDVI
GLLIPSLTNSVFSDVLRGMYDEAENHPFSIQIGNFRYRPLTEEMLIGKFLRQKPAGLIVAGLDQTDISKG
MLRAADCPVIQIMDYDASAEGDMIGFSHYEAGAAAARHLRDRGYRRIGFLGARMDPRTQRRLAGFNDALN
GTDDPQQSKRVIVTSTASSVSLGAELLRELLVRAPDSDAIFCNNDDLAIGALLEAQRRGIRIPEDFGICG
FNDLEMSKQMNPGLTSIATPRYEIGRLAISTIVDALSSDKASDPTRIDLGFTVVMRGSSARAVD
>gi|56709119|ref|YP_165164.1| hypothetical protein SPOA0337 [Ruegeria pomeroyi DSS-3]
MSSNSTHTVSGTVWNQTGNAIKKVWICHFPGKGAAPQYFETQNSLNNNQGESFSYDGIQLPSGGNDQWMV
YYQDAFNNLIGTDGLFNAEINHNNGGVTITLDGTSVDVGQKSSIGVEDTTTYTAMQVPMVAGYLSQGGIS
VSDMYIAAGLTAPTKSGIGIALSGGGSRAMSAGIGQLQALVSMGWTKDVLAMSTVSGGGWVGIPYMFLPK
EFSDDDFLGSYLPPEQLTNSNINTMGPSQIGGKTNKMSALTLFISMLHMSHAVSDDDRLYSNGTMIWQML
MARYFLHPYGLVTIGHDFNPSDTFAYSDAVIKNNALVNQPVIRSDPFQQADMADPYKIARPMMISNMMLE
VQNQSATTFGAPVVSTPFFTGCLGAPDATTTRGIKSSVGGAAVASQGFNSMYWYLNGNQPQDQANLVISQ
RRNWALADCLGTSSSAIAAGVLQFMSRLSLNEIADGVMENGPDVLEADREMLPEDVYLELKNMYDAGDRE
SLLAQLSAQDIPSFLKTPSYMYWSPAHVESSGTSKNPMDYEANFVDGGLMENTGVANLLAFTDINVVFAF
INTATAMTKTGGAGIPGQNGTDIQVTEDIAALFGYRPYSKSKGWERYSSTDLTKGSIQSRCLARAQIFPD
GKFAEFLKGLWQATLDENNNPGVYPAVLSQLLELRANPLFGIFKSRLVTISWHYLTPASSWNAALTPSVS
STLSGISDFPNYPTIRTGLDYSEVNFLSSFAGFCALPSNRKPGTSSLMEEVFMSTPDMPDLED
>gi|56709120|ref|YP_165165.1| LysR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MDLRKLDLNLLVTFEAIYTAGNISHAAKRLNVSQPTISNALARLRDTVGDPLFIRSGRGVAPTPRATGMI
GPVRDALQMIQSGFGDDERFDPSTTRRNFRIVVLDMLEPILMPPLVRAVQDYRSVTLEMLPVMDFPIAEG
LNDGSLDLALTTFDPQHGDIECEQVGAAKIVIVARKGHPRIKGEMTPALVSEIGHVALIPKIRALSRVDE
VLRYAKIDRHIVYMVTRFWSFPHILANSDLIAMMPGDFAAHAALFYPLDIFPVPFEFPEQHIYMIWKKRH
GLDPGHTWLREKIVEAYRESEARPPGARASVPGAPRPSDFGQTN
>gi|56709121|ref|YP_165166.1| HAD family hydrolase [Ruegeria pomeroyi DSS-3]
MKRFAFFDVDDTLITVKSMFDFFRYWTLEWRRESAALEAFEREFSQLRAAGESRENLNRAYYRYFAGIRS
EDIERAGAAWASAWLAHPERFFIAAPVHLLRELSADGVEPVFVSGSFDAVLRPIADHLSVTNILAAPLEL
RADGCYTGRIGTPQTIGAGKAVAIRNFLSEQKVRADVCLAVGDDISDLPMLQSVGTAVVVGEHPQLTEIA
DARSWRRLPAMAE
>gi|56709122|ref|YP_165167.1| tautomerase, putative [Ruegeria pomeroyi DSS-3]
MPVIQISTFKMADQQKAEALLHEVTAAMHRVTGVPLDKISVFLTEVDPARWADAGVVGTHPEFQNLSRRK
AYGEVSG
>gi|56709123|ref|YP_165168.1| hypothetical protein SPOA0341 [Ruegeria pomeroyi DSS-3]
MDEDGNFVVIGAVTTRADDGVTTRWTGAVVSAQSPVPAFGERAPYTIIERFEPDEPLPKHLGDKVLHTLP
LPLPCNNYPMVFAPQQYPDANTEDRPSYPLHRAPIPDFEPEHGRQLDRPVTLAEWVRASGTLTVTLEHEA
RKARFSFTFSDLLPRTLYTIMTLREHDLDPAGPTRPGPLGVPNVFVTDRSGGAAFEAVLPNPFPDPSQEG
GNRVINVVVLCMSSQMSHGGAIGRYGLGGDIHAQLKFPQPMFHEFTTRA
>gi|56709124|ref|YP_165169.1| hypothetical protein SPOA0342 [Ruegeria pomeroyi DSS-3]
MTDNSMKFDTLIVVADKFAEFTVEKPAVTLSQLHAMLKLPKHLVPGAVRLLPGQGLSEGDIADLIVQINA
LDPAGLKWELSLLRTLPERADPCISHKRRSCNTLIGSPTKTAHDCYRIDLCIDENCELMGDHQTGQHVQG
MLLIEAARQSFIAVTEKYLLTDLEEKTYFVINAITTEFTGFVFPLSAHIEYRIVSANVNDRRRKYQVEMD
FIQNGELRTRIGCAFTVFPHQVIAEKEAALARDAAHCALTQVSLGANAHAA
>gi|56709125|ref|YP_165170.1| hypothetical protein SPOA0343 [Ruegeria pomeroyi DSS-3]
MPAELVLISRYPAKPAAAPALAAKLAPVARGRTLVALDDDEVVTLVPLEAETALDGLRHSLSEDAAEFAE
FLSGDIRREIVSFVEAPKSCNGPLPDTPYIQLRHVEVKPEQYAAYRDWRDATIFDVVRNADEVENFLAYH
SVVSGQPGVMFVSGFSVAPDTYGEVFASERYQDIVRQAGDRYITGGTGGLYTRIYADMSGRVS
>gi|56709126|ref|YP_165171.1| LysR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MEKPENIGNTISIIGKPSGRSLVWDDTRAFLAVARHGTLSAAAGALHIGIATLSRRIDRMEEALGVPLFV
RHQSGYQLTEDGSDLIEKAEAMENAAIALSTGAKLQAQLTGKVRLATAENFASGLIIPALPEFQARFPGL
MVEIVTDITTVNVHRRDADLALRMVKPQRGNVTLQRLGTLGYGLYASEAYVQGRNPGTDRGSYETDAFIS
WGEGQSHLPAAQWAERMLRGRAPALTTTSLSTQVTAAAAGLGLAVLPHFLAADAGLVCLNANIGIDQPIY
LVIQSDLAQSRRTRALADFLAELVHSNRTRLRGY
>gi|56709127|ref|YP_165172.1| aldo/keto reductase family oxidoreductase [Ruegeria pomeroyi DSS-3]
MLRRKLGQDLEVSAIGLGCMGMSEFYGPRDDEKSLDVMSRAVVLGIDFFDTADMYGPHHNEELIGTFLRQ
SRARIQVATKFGIVRNPGEYKRSLDNSASYARTACEGSLRRLGVDCIDLYYVHRVNTNQPIEETMEGLAA
LVKEGKIARIGLCEVSAETLRRAHAVHPVTAVQTEYSLWSREVENSVLPTCRALGIGFVPYSPLGRGFLT
GRFQSPDEITDGDFRASLPRFAEDAITQNRSISNVIAAIAAEKGCSQAQLSLAWLLAKGDNIVPIPGTKR
RRYLEENAAAASITLTGEEIARLEASIAELPIIGERYTAEGMKGVDA
>gi|56709128|ref|YP_165173.1| carboxymuconolactone decarboxylase family protein [Ruegeria pomeroyi DSS-3]
MKPTHGIERDTLALAILDQLESGASERVSNNLDAFDASATELILGFSFADVLSREGIDLRTREMLTVAML
GAKGTAPGQLDFHMRAALNCGVTRPEIVEIIYQIAVYAGVPAAMNAITSAKKAFEAANI
>gi|56709129|ref|YP_165174.1| hypothetical protein SPOA0347 [Ruegeria pomeroyi DSS-3]
MSQYSQRATWRAWLAIAALGTGSFSIVTAELAPIGLLSQIGGDLGVSTAKVGLIVTLYAWIAAAAALASA
IWLGGLPRRPLLVGLMAVLAASGFATSYSGSFAGLMSARIIGAVAHGAFWAMIGTLGAQIVPARQVGVAT
SIIFGGVSVASVLGVPLANLVGTSEGWRSSFLIIGWLSLAVALAVLVTVPAVQGTGRIGTQALFRILSNR
RFQRIFLATLFAVTAHFMAFTYVEPFLANASAIPVRAIAPLLFTFGAAGIAANMLTAALIDNWLKRIVTL
SLLLAAAALGVLALFGPQLDLYGAGLALIVWGGSISAILVGLQTWVLKEAGADALQASAIYVALFNGAIG
LGAAIGAALLGVTSLPGLFLCSALLIGIGIVSVISLAEPQMSPAE
>gi|56709130|ref|YP_165175.1| hypothetical protein SPOA0348 [Ruegeria pomeroyi DSS-3]
MSPKSPPSGPAKPIATPIVSSDHLAGTDQGWQFSELEYAMTMTYNAFSRWMTHCMKAVGYKDFNPLDILV
LHNVNHRGKEKRLSDIAFMLNVEDNHTVNYALKKLAKADLVVGRKVGKEMFYSTSDQGRQVCEAYRDVRK
ACLLDAAEATDRDYDEISHVARVLRSVSGLYDQASRSAASL
>gi|56709131|ref|YP_165176.1| hypothetical protein SPOA0349 [Ruegeria pomeroyi DSS-3]
MSRPAAPLQGMAYALAGFAVFSLHDALIKALGAGYSVFQIIFFATLFSFVPITVTMLADRRVDTFRPNNP
GLVLLRSGLMVGSMVSAFYAFSQLPLTEVYTLLFTFPLLVTALSVPLLGEVVRAQRWAAVGIGLIGVLIV
LRPGMSALTLGHLAALTAAVCSALATILVRKIGNSERSAVLILYPMLLGALAMGAMQPLVYRPPELVHLG
MMALVGVMSFAAQHLIIQAYRAAPPAVVSPIQYSQIVWATLLGAVLFGERPDGWVALGAGIIIASGLFVV
WRESRANVSTRSPVLRAANPRPDAGPSPAPKGPALEPDR
>gi|56709132|ref|YP_165177.1| hypothetical protein SPOA0350 [Ruegeria pomeroyi DSS-3]
MSNWFMIWPGSKGGGAALNDRRHISGPGPHDIHRFGIAAMCAAHACPFCVSANGAMQQRRHPGRRPPQDP
IS
>gi|56709133|ref|YP_165178.1| hypothetical protein SPOA0351 [Ruegeria pomeroyi DSS-3]
MGKGAALPRRLAAGGQAQGGYKAHHGPAQHGDAIAQGLSTQALGLAMISVDLRLAQVGNVELVHDLAGVQ
GRRRRVE
>gi|56709134|ref|YP_165179.1| hypothetical protein SPOA0352 [Ruegeria pomeroyi DSS-3]
MKTANFIKENNARQFWQPMTHPADAQANPPKIITGAAGVRIRDIDGHETIDAVGGLWNVNLGYSNDAVKQ
AITGQLDSLPYYSTFRGTTNDAAIELAYDLCDFFAEEGIQRVFYTSGGSDSVETALRLARQYHKLRGQPQ
RTKFLSLKKGYHGTHFGGASVNGNNKFRTDYEPLLPGCFHIPAPYTYRNPFNETDPARLAQLCAQALEDE
IAFQGAETIAAFIMEPILGAGGVIPPHESFMPMVREICDRNGILLIADEVITAFGRTGAWSGSRLWGVQP
DMMCTAKAITNGYFPFGAVLIGTRMTEVFEGDTSGKGAISHGYTYSGHPVGAAAAVVCLKETVKANVAEN
AATRGEELFNGLQALAAKHEMIGDVRGGHGLMAALEVVADRASKAPAGAAMMNTVYETAYGAGVMLRVSG
PNIILSPPLVLSAQDVADILSALDAGFAALG
>gi|56709135|ref|YP_165180.1| aldehyde dehydrogenase family protein [Ruegeria pomeroyi DSS-3]
MDQAAIDALRTRVIPPRGHVIGGRVEGGGETLDVISPIDGSVLTQIARGGAREVAQATAAARHAFTSRIW
AGQPPAARKKVLTRLAELIEGEALDLAVQGVRDNGTEISMAFKAESGSAAGTFRYYAEALDKVYGEIAPT
AGDILGLVHKEPVGVVGAILPWNFPLMIGAWKIAPALAMGNSIVVKPAESASLSILRLAELALEAGLPEG
VFNVVTGKGSEVGEAMGLSMEIDILVFTGSGAVGRRLLEYSARSNLKRCYLELGGKSPNVVFADVADLDH
AAKVSAAGIFRNSGQVCVAGSRLIVERSIHDEFVDALCRHASALRVGDPLDLGSTVGAVHSVAQLEQNLR
FVETALAEGADCALGGKRILEETGGYYMQPTVMTGVTRDATLNQQEVFGPVLAVSAFDTEGEAVDLANST
VYGLASGLWTSDLGRAHRMVRAIRAGVVHVNTYGGADGTVPLGGVGQSGNGHDKSLHALDKYVDLKTAWM
QL
>gi|56709136|ref|YP_165181.1| aminotransferase, class III [Ruegeria pomeroyi DSS-3]
MTPDTQALLDRRARLLGPNVSLFYDEPVHVVRGQGVWLWDNDGNRYLDCYNNVPHVGHCHPRVVEAIATQ
AATLNTHTRYLHEGILDYVEALTATFDAPLDTAILTCTGSEANDIALRMAQAVTGNTGVIATDHTYHGNT
MAVSQLSRTNPPPGGYWDNMAFVPAPDSYRPLGGVPGPAHALAFAAAVQGQIEALAARGHKLACLILCPY
FANEGFPTLEPGWLAPAIEAVRRAGGIVIADEVQPGFGRLGSHFWGHQKAGIQPDVVTLGKPMANGHPVG
GVVTSPEIMAAFRERFRYFNTFGGNPVSAAAALATLKVVQDEGLMENARAVGDYAREGLRDLAGRHECIG
DVRGSGLFFGAELVLDRTDKTPATAFAKRVANAMRQRGVLLNFLGIHYNTLKIRPPMPFSRDNADQLIET
LDAVLSETPFVP
>gi|56709137|ref|YP_165182.1| hypothetical protein SPOA0355 [Ruegeria pomeroyi DSS-3]
MTAAVARALTLWGLDGASYELAAQRENEVWKVSDGTRHYALRFHRPAYRSEAELTSELLWVEMLGQAGMQ
VPQPVRQPDGAVLGRIEGRHVSLLDWLGGRPLGKMGQLAPDLDAEAVGRMIGAQMARMHDLSDRWTPPAG
FQRPDWRRSGLLGADPLWGRFWEHPDLDPAQRQLMIATRERALACFEDFAPGADQGLIHADLVVENVLVD
HDRVAFIDFDDGAWGYRDFDLATVLVKFIGQPDYDRLRAGLCAGYDARRRVEPGTLDFMLLLRALTYPGW
IMSRLDEPGGRQRSARMLDTALRLARDFMEERQR
>gi|56709138|ref|YP_165183.1| hypothetical protein SPOA0356 [Ruegeria pomeroyi DSS-3]
MSDKTILIAGTYDTKDDELTYLAGVIAAQGGGVLSMDVSVLGDPSRPTDVSKHAVAEAGGSSIQAAIDSG
DENGAMQIMARGAAAKALELYLAGRIHGVIVLGGTMGTDLALDLCAALPLGVPKYIVSTVSFSPLLPPER
IPADVQMILWAGGLYGLNSICKASLSQAAGAVLGAARAVEAPHRDRPLIGMTSFGKTVLRYMVSLKPALE
ARGYEVAVFHATGMGGRAFESLAAEGAFAAVFDFAPQEVANHLYGGLSAGADRMTNAGRRGIPQLVAPGC
YDLVDYIGWQAPPPALADRPSHAHNRLLTSAVLEADERRAVARAICAKLAGASGPVALMLPTGGCNEWDR
PDAPLHDAEGLAAFCDEIRSACPANADLVTLDAHINDAAFSERALAIFDDWVARGLVAKGA
>gi|56709139|ref|YP_165184.1| DNA-binding response regulator [Ruegeria pomeroyi DSS-3]
MQNATPHILVVDDHSEIRTAVCRYLEKSGLRTTMAKDAREMDAVLATENIDLVVLDVMMPGEDGLSACKR
LSQSGDIPILLLTALSEDMDRIVGLETGADDYLAKPFNPRELLARIRAILRRTSRTVSPAGSLAGKRVRF
AQWILDSDRRVIVDSEGRETSLTSADFKLLVVMLERARMVLSREQLMELTSGRVAAPLDRTIDNQISRLR
RKIERDLLRPRLITTYRNGGYCLAADVEVLDP
>gi|56709140|ref|YP_165185.1| sensor histidine kinase [Ruegeria pomeroyi DSS-3]
MPQSLRLQIVCLVLAALAVAQGVTLVLLEDQRGLAVRAAIGNEATGRAANVVRLIERAPVNLHGQIVSAA
NSPLVRFEIGTDPVVDHISHDANGATEARIRALLDDDFSREIRAELHEIDSSALPLPYLEPGMADQHREM
MRGQMLTVELELSIALAGGDWLNVSTRFERPPLQWPQFATLSFGLSAAFILLAVFWYLLARVTGPLRLLA
AAAEKLGPEQGAPVLASAGPREVRELIQAFNRMQDRIVRLVAERTRMLAALGHDLRSPLTAMRVRSEFVE
DDETRDSMIASIEEMQHMVEETLSFARGLADGEPLQSVELGAFLKTLRQDMPDGFTLAQGERIEVPLRPN
AMRRALRNLIENAQRYGSEAEVSFARTRGGAVIRVCDRGPGIPEPELERVFDPFMRLETSRSRETGGHGL
GLSIARSILRAHGGDIVLSNRPEGGLCASLSLPRQG
>gi|56709141|ref|YP_165186.1| cytochrome c family protein [Ruegeria pomeroyi DSS-3]
MAGQGYISIQNSARDALDPPALEGANWQPTGPPVDNGFHGFGQRGERHMNKLGLAILAVPLAGLGFLVWN
MLAPAPQSHSMTPPDTSAQQPGAPLAEVTLPTELSQNARIGQRAFEAKCAVCHGQNAAGQNGVAPPLVHP
IYRPGHHADAAFLIAARNGVRAHHWKFGNMPPVEGITDGEVQMITRYIRELQQANGIE
>gi|56709142|ref|YP_165187.1| multicopper oxidase, putative [Ruegeria pomeroyi DSS-3]
MAPDISEHQGKNMLSRRSFLWASGGVAAIAALPATAIRAQTAAPELVARVNPVQLLPSGYPETSVWGYGG
QAPGAEIRVTQGARIARRFVNQLPQASSVHWHGLRAENAMDGVSGLTQDAVPPGESFDYDLVAEDAGTFW
YHSHNRSAEQVARGLYGPLIVDEPTPPDVDRDVTLMLDDWRIDPETGQIEDDFGATHDLSHGGRLGNYIS
TNGEAAYQLPVKRHERLRLRIVNAANARLFTLGLQGLDGWLMAYDGMPIATPEAIPETFTLGPGQRVDLF
VDVIADAGQEALLGRVDQRGGFVQAAFPVSGGASVNRRPAPAPLPPNRAPDLAGLDEAATLRLEMSGGAM
GGMRDAIWKGSSRKAGDLMAEGQFWAFNGLVGMTDTPLASLSLGQVARMTVVNDTVFAHAMHLHGMHFRV
LAEDGTPGPLRDTLLTMRGETHEIVFAADNPGRWAFHCHMLSHAASGMMTWIEVTA
>gi|56709143|ref|YP_165188.1| cytochrome c family protein [Ruegeria pomeroyi DSS-3]
MKPVYLAGSAVAIIALAAVIYAARATTGPVSAGASTSVSVVSDATLAQGETLYQENCASCHGRSLEGQPN
WREPDADGRLPAPPHDESGHTWHHPDSMLFDYTKFGGQATLAALGVELESGMPAFGEQLSDDQIRSILDY
IKSTWPARVRAAQAERTRADEEARNQ
>gi|56709144|ref|YP_165189.1| 27kDa outer membrane protein [Ruegeria pomeroyi DSS-3]
MTRAKQIILWASLSAMPLIAQASERSDDEIKALVYQAILERPEIILQAVEQLQQAEEAAQAASAHAALTE
NRDSLFNDPNAPVLGNPEGDVTVVEFFDYNCPYCRRAMAEVQGLVDADPNVRLVYREWPILGEGSDFAAR
AALAARQQGKYEAFHWALMGMSGKANETGVLRIAREVGLDTEQLQRDMEAPEVTAHIAQSMALAQKLGFN
GTPSFVVEDALVPGFVEQSQLQDAVDRARKAAAK
>gi|56709145|ref|YP_165190.1| hypothetical protein SPOA0363 [Ruegeria pomeroyi DSS-3]
MPPAQPPITGAKLQSRPAHRPFPSRSVTVALLAALMVAAVLAVGWAGLEQQSVAALLERAGPLGPIAIVA
LMTLAVVISPLPSAPIALAAGAAYGHALGTGLVLAGAMAGAMIAFTLARLLGRAFVVRWVGPMSDAGLLG
SQNFLTWTVLVSRLLPFVSFDLVSYAAGLSALRPWRFVLATLVGIVPASFGLAHLGSALRQPAAGGAVWP
VLALGLLTGLPVAWAVWRSRRAPGPAGASGSPAQSTKMPRRL
>gi|56709146|ref|YP_165191.1| hypothetical protein SPOA0364 [Ruegeria pomeroyi DSS-3]
MSASRILTAFGLTGALVTAGVAQAGIVYIPEGSADSVLMVESETGQPVGRISGVEAVHGLAGAPGTPYLV
AGSYSEIDPESAAQTARPEGVSQADHNAHHAKPAKAAMPTDKGLSLVSVIDAGTGEVVRRIEVPGAVHHT
AVSPDGRWAMATHPGGDGVSLIDLSTLEYAGFIATGPMPNYVSFSPDNSRAYVSNAGNGTLSELDLDRRI
LSRNLLAGEGPEHFALSRDGATVFVADAEAGRVLRLDIASGAETASYGFGAELHGLDLSEREDTLFVAVK
GADQVAAVDLASGAVRLQELAPAPYHLTVADGGETLFVSSREASMVWAVDQVSLRVTAEIGIEGEGHQMV
VLP
>gi|56709147|ref|YP_165192.1| copper-translocating P-type ATPase [Ruegeria pomeroyi DSS-3]
MEHSAHSHPTPDTPDIFTCPMHPEVRQSAPGSCPKCGMTLVSEQAAALHAQCHGQGHGPGHGGTDEPGGK
YDSVPAGWTGSVYTCPMHPQVRQTDPGSCPLCGMGLELDSVASADDGPNPELVDFTRRFRVGAVLTLPLL
VLTMGPYLGFPEVRTLFGERMTLWIELVLGTPVVWWCGWPFMMRGWTSFRTRHLNMFSLIAMGVLAAWLF
SVAAVLWPQVFPDGFRDAEGNVGVYFEAAAVIVTLVLLGQVMELRAREGTGKAIRALLDMAAKTARVIRD
DGREEEIPLDAVQRGDRLRVRPGDKVPVDGVVTEGRSSVDESMITGEPVPVEKVAGDRLTGATINGTGSL
VMEATRVGADTMLSQIVEMVSNAQRSRAPIQKYADQVAGMFVPAVIVIAALAFVGWAFWGPAPALSYALV
AAVAVLIIACPCALGLATPMSIMTATGRGAQAGVLIKNAEALERFEKVDTLIVDKTGTLTMGKPRLVAVL
PEAGHDEGEVLRLAATLEKGSEHPLAEAIVAGAEERGVALGTATDFEAVTGKGVTGTVDGKAVALGNRKL
VEDLGLDAGNLAETANTRRDEGETVMFVVVEGALAGLVAVSDPVKETTPAALKALHELGFRIIMATGDNE
RTAKAVAARLGIDEIRADVLPEDKARIVRELQAEGRKVAMAGDGVNDAPALAQADVGIAMGTGADVAIES
AGITLVKGNLDGIVRARRLARATMRNIRQNLFFALIYNASGVPVAAGLLYPFFGILISPMFAAFAMSASS
ISVVLNALRLRGTRI
>gi|56709148|ref|YP_165193.1| amino acid permease [Ruegeria pomeroyi DSS-3]
MTRTPQTHEAAPGGAGSISLTNAVAMGTGVMIGAGIFALTGQIAGLAGPLFPLSFVLGAVVTMFSAYSYI
VMSNTWPSSGGIAMILTKAYGPGAVAAAASVLMALSMVINESLVARTFATYALRPFGIQDGPLVPAIGVA
LIVMAYLVNVSGNRAVGLWSLVMSAVKIGGIALFGIAALWASGIENWSPAARLSQNGITGFAASVALSIL
AFKGFTTITNSGGEITDPRRNVGRTILLSIAVCVVVYLLVALAVGSALTPVQIQQARDYALAEAAQPVLG
QTGFYLTVALAMVATASGLIASVFAVSRMLTMLTEMKMIPHSHFGMPGGIRSHMLIYTVVIAGALTVLFD
LGRIASLGAFFYLVMDMVVHWGVWKNLRHRIGARGWVILTALTLDAAVLAAFTLFKWRADPTIVIVALVT
MLAALLAERLYLGGFVSDGGEGKHTGHR
>gi|56709149|ref|YP_165194.1| ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MHLILVLAPSLLLVSLLALVFQGLRQLRRNREQRGPRRRTPPRIGGLERNLLRQILRGARRQQAGLLLLS
LSLMPPLYLSLEMPKQIVNNVLEPSAGPAEIYGVSLNQMQMLGLFSAIYLAAISLNGLGKYMLNTRKGRV
AEHLLRRVRLLIYRHWRQRPPHQRQSEIVQVLGAEVEPIGGFAADLIALPVTQGGTLLTILLFMFLQDPI
LGAAALTVLPVQLVLLPYLQRIVNRLSRERIRAMRVLTRGLTGQLSPEQNGLEHIRQTAASLRELERIRY
RIHRVKFLAKALNNFLTALTPFLFYSLGGYFVIEERITLGALIAVLAAHKDFSAPLKELFRYYQQLEDTR
IRYRAVLGFLIERHGAPVDGTPEPDRA
>gi|56709150|ref|YP_165195.1| hypothetical protein SPOA0368 [Ruegeria pomeroyi DSS-3]
MKNLLIVSLVTAISASVAIAGPSGHSEQSQGQGHDSGGGHAGMMETGMPGQASQVNRTIKVTMSETDDGE
MIYTPKDFDIKKGETIRFMVTNKGELEHEFILDTVERNAMHKEAMSQQMESHQSPNAITLEPGKKGEIIW
TFGNPGTFEVACLIPGHYESGMFGKVAVN
>gi|56709151|ref|YP_165196.1| copper resistance protein B, putative [Ruegeria pomeroyi DSS-3]
MAWALPAQAEQLIYGFQAEQLEYRQGDSEDSFVWDFDALIGTDELKLVWRSEGERVQGAGGFETLENQLR
LQFPVSTFFDAVVGVQASTPDGLPDRYNAVLGLKGLAPQWFEIDADLYLSDNSFFRFEGEYEAMLTNRLT
LTPSLELTLPLQDDPIYNQAAGGVTLEAGLRLSYDLIDRAVSPYIGVNYERSYGGTADMIRAAGDENGAF
SVVFGTRLMF
>gi|56709152|ref|YP_165197.1| copper resistance protein A [Ruegeria pomeroyi DSS-3]
MPHISAWRAALAGATLLLSAATAAQAGTYDITVDKIRIDAGNFRKNGIGYNNSQTPTILRFKEGEKVTLN
VTNNLREDTSIHWHGLILPFDQDGVPKISFDGIKPGETFTYNFPIVQAGTYWFHSHSGFQEPDGAYGAIV
IEPKGGERIRANRDYVVQLTDTHPQRGKRIMRNLKMSADYYNRSQRTLQDLIKDSGDIGLKAALEDRKMW
GRMRMMPTDVEDVQGFTPMINGESTEQNWTGLFKPGEKVRLRLINSSAMAYFDVRIPGLKMTVVQADGND
VKPVTVDELRISVAETYDVIVQPKENRVYSIVAESMGRTALVRGTLAPREGMAGPVPPLREKPRLTMADM
SGMMGSMGMEGHVMQSAAKPLDDMSGMDHSQMNMQPKPQPMEGMDHSQMGHAAPAPKAEAAPMDHSAMTG
TDQPMAGMDHSQMGHAAPAPQAKAAPMDHSTMTGADKPMAGMDHSRMTGSGNSMAGMDHSAMANAKGQGD
PFYAPGSGLTPKAANGGKFLSYDDLTARKPLYKDRPATREIELRLTGNMERYIWSINGKKLSEAEPIVLK
YGERVRFKFVNETMMSHPMHLHGMWSILDTGKGQYDPIKHTVSVAPGTTVYTETEVDVTGQWAFHCHLSY
HADAGMFRKVVIQGGPA
>gi|56709153|ref|YP_165198.1| hypothetical protein SPOA0371 [Ruegeria pomeroyi DSS-3]
MRQRAEKMWTSLALALLLTLSAFFAPLTAEIDHRGSPDMAAQHQTADAHNHTGVSSCHKIAACEVPVAML
PRDRVALAGAASNVTFSLNDRAPASMALEAPLPPPKVHTTGA
>gi|56709154|ref|YP_165199.1| TRAP dicarboxylate transporter, DctQ subunit [Ruegeria pomeroyi DSS-3]
MLTITRLVDRAIRMILTAFCAVLLLMMVAFTVYTVVMRYVFENPPVWGDLLTVLSNIWLVFFALALTVRD
KDHIALDLIYTRLPLKWAFLVQQFWTLVIFALGLVMIIWGVEAVTTMGGKYWEMWYFAWEDGKLVFKPNY
MPKKYAVAIVPISGFLVSLAAIASMLEDSARLRAGTYDPAKGLDSGG
>gi|56709155|ref|YP_165200.1| TRAP dicarboxylate transporter, DctM subunit [Ruegeria pomeroyi DSS-3]
MESILLLTVLVLLILLGAPIGFTLILIPVVYILITDAAPMILIPSQMFSAIDSVPLTAIPFFMLTGELMT
SATITDRLVDLSRKMIGRMRGSLAQVNVLVSMFFAGMNGSVVADTATVGSLLVPAMKRAGYPPAFAAAIT
AVSSTIGGIIPPSIMMIVLANASGVSVGALFAGGIVPGIMIGLLLMIINHIIAKRNGFERSAEAFSPKAI
AVATYKSSLALLIPIVLVGSVVFGIAGVVEAGALTATIALFVGLFVYRTITWNNCKSAFVRAFRNSAMVF
IIIAASGPFSWLLTSMGAINQLEDWLLSYTYNPLMFALVLVMFICLLGMVMDSAANIIVVGPVLVDVMVK
AGYSDVQAALVVVVGFLIGSVTPPVGVAFFTAGAIAEVRLEKVALAMLPYLVALFALLFVLIVVPEITMY
LPRAFGFVN
>gi|56709156|ref|YP_165201.1| TRAP dicarboxylate transporter, DctP subunit [Ruegeria pomeroyi DSS-3]
MKIESALRTFCLASAAALFAQSATGETVLKLGTVGQLGMPIGDAIAEALIPTLEEVSGGQMTIEPHYRGS
LCGEQTCGEQANQGLLALWTSSTANFGSFGTSLAIFDLPYIFKSIEDADRISAEWLAQKQCEIAAEEAGH
VCLTVYSSGGFRQLGNALRPVHVPADMEGIKWRVTKSPIEYTLIKNWGAVPVPYDWTQLYQGLQTGVVSG
QYVATPWQHIAKLHEVAKYYTQIGGSWSGNQLSIDKRQYDALSDQERDWLHQAAAAFGQRVQELDREWVA
AGETAIKAEITEWYMPTDEELALWRAGAIDAWINAKGTFDPETAIRVLEEQGMTDFIDQLKAAGAL
>gi|56709157|ref|YP_165202.1| GntR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MSSTTPRFLKLPEASSLSLRDQICEVVSAAIMSDALAYDRPLPSCRELAEQFSVSRNTVFAAYNRLVDLE
FLVSRDRSGYFVNPQMALAQKPETDTRSALAEPVPCPVAFPASNLMPVVNPLDWNAYPYPFIYNQIDPDL
FPVDGWRECTRQALGRRNLLDWASDSVESDSPRLVQQLRQRLLNTRGIYVEDDEILVTLGSQNALFLLGT
IFAKFGKPIALEDPGFFGARNAFRLAGSELVGVPVDGDGLIPAEIPEGCQLIFTTPSHQFPTMVTMSQTR
REELLEAAERRDFLIIEDDYEAEMNYVSKSSPSMRSMDRNGRVIYVGSLSKTLSPGIRLGFIVAHRDIIR
EARVARGVMMRHPPTIVQEIVALFFQLGHYDAHLRNIERRYKKRWHAMNNALSRHLGMLERTESEGGTSF
WLTGPEGFDASALARRLRGKGVLIDRGQDYYLNCNDKRSFRLGFAYVPLSKLEQGIKIIADEVWALL
>gi|56709158|ref|YP_165203.1| epoxide hydrolase domain-containing protein [Ruegeria pomeroyi DSS-3]
MQLAASVPSNCTTCLSPIPGFASYLSGTSPWPQGVGSKSTRSGKRVLKDHVASNPNVSPFRFHVPDDVLE
SIRSRVAAYPWHEMPDDGGWDYGTNMDYLKELCAYWVDGFDWRAQEARLNAFSNHTAKVDGIDMHFLYEP
GSGPDPLPLMISHGWPGSVAEFFEIIEPLAHPERFGGDIADAFTVIAPSLPGFAFSTRPPRPWGPRRMAG
AINALMTEVLGFDGYLAQGGDWGGAICSWLGFEHAPACSAIHINVLTMRHPDGPQTPEEVAWDAQFECDQ
IMQNGYRTQQATRPQTLSYAMMDSPVGVAAWLVEKFHDWSDIPVGDIESAHSKDELLTNIMIYVTTRCFN
SASWIYYGRREEGGRILSPEGRRVEVPTGCAVFPREMLRWPPRSYAERLYNIQHWTEMPRGGHFAAMEQP
GMLVDDIRAFARTLRR
>gi|56709159|ref|YP_165204.1| aldehyde dehydrogenase family protein [Ruegeria pomeroyi DSS-3]
MTLSHAEYRSIAATLEPNGMAFIDGAFCAAADGDSFETINPATGEILARVAHCKAADVDRAVAAARRVFN
DGTWSRAEPEARKEVLLKVADLVRKHSDELAVLESLDTGKTITDCLAEIGGEVPKFFQWYAELADKTFGK
IAPTSPGALALITREPAGIAGAVLPWNFPLVMAAWKIAPALAVGCSAVIKPAEQTPLSTIRLAELMQEAG
VPAGVVNIVPGFGETAGKAIGLHNDIDTVSFTGSTEVGRMFMRYSGESNLKGVGLEMGGKSPFIVLDDAV
IDDALIEHAAMSAFWNGGQNCSANMRQLIATPLVEEFTARIIARVKSFRLGDPLDPATDIGSMITKDHKD
MVLSYIQSGVEEGAQKVIGGNSDLPGFFIEPTVFRNLSPEMKIAREEIFGPVLGIMPVASPQEALAIASD
TEYGLHATVFTRDIDRALHIARSLPCGTVSINGFSEGDIKTPFGGYKQSGSMARDNGTEALEQYLQTKTI
WIETQAG
>gi|56709160|ref|YP_165205.1| mandelate racemase/muconate lactonizing enzyme family protein [Ruegeria pomeroyi DSS-3]
MKLVKLETFSTEFVCFVRATAEDGAQGWGQVAPYYADITAQVLHRQVAPYALGMACEDIDAMLDIVRDRE
HKFPGSYLRRAMGGVDTALWDMHGRRAGKPVCVLIGGTPGPVRAYGSSMKRDITPRDEAARLVRLRDEQG
FDAFKFRIGAEVGRDRDEWPGRTEEIVPTMRRAMGDDVALLVDANSCYSPARAIEVGRMLEQHGISHYEE
PCPYWEFAQTKEVTDTLDLDITGGEQDCLMERWQTMIADRVVDVLQPDICYLGGLSRTLRVARMAEAAGM
PITPHAANLSMVTLFTMHLLRAIPNAGKYLEFSIEGLDYYPWQQGLFTSDPYRIEEGHATVTDAPGWGVD
VNPDWLARSDYRVSELG
>gi|56709161|ref|YP_165206.1| GntR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MKHAAGALLSSIRLDRTLRRSVSVQLYMALRDMILSGALRAGERLPATRTLAKEVGVSRTTVIDAIDRLV
AEGMLVSRIGAGTYVSETLENQHLTTPPSEGAGGRQPRLSYVISHAEPAYARRAWLPHKPRAFVTALPAL
DAFPMAHWARLSARHLRGGRGDVMGYGQPKGLAALRRAIATHLSALKGIRCHPEQVFITSGAQHAFSLIG
RLLLNPGDRVWMENPGASGARNALLSEGAELVPVDVDGQGMVVSDGLAKAPHFRLAFVTPSHQQPLGHVM
SLPRRLELLQAAEQAQALIIEDDYDGEFYFGNAPRPALHSIDANGRVLYVGTFSKSLFPSLRLGFVLVPE
RMVAAFDGMFNTWASGPSTATQAIVAEFMDEGHFATHIRLMRQLYKARYEALLEAARGLPESIGLQETTS
GFHTPAFLAPGVDEAEVVAQAAQQGVTLAPLARYCLSPIPQTGLVFGFGCATPEDIARGMGILRDLPVLR
>gi|56709162|ref|YP_165207.1| hypothetical protein SPOA0380 [Ruegeria pomeroyi DSS-3]
MPLSKIRQTPFWHDQLGAMPALQTQPSAKVDVLIVGAGYTGLSAALTTARGGRSTLVMDAEDPGYGCSSR
NGGQISTSVKPSLEKLTAKFGPERARGIRAEGANALRWIGEFVGGEGLDCDFRRVGRFHAAHTPGHYEEL
VRDAETLRQQEGIESFAVPRAEQRSQLGTDAYFGGVVFSAHCSLHPGKFHRELLRLAIGAGAQVVGQCRV
GAITRSGSGFQVETAKGVVEARDVIVATNGYTTALTPWLQRRVIPIGSYIIATEELPEATIDELFPGDRI
ASDTCKVVYYYRASPDRRRVLFGGRVSASETTALAGAARLRHDMCRIFPQLEGVALSHAWSGTVAYSFDE
LAHTGVQEGIHFAMGYCGSGVSMAPYLGMRAGQKVLGLAEGQTAFDGLPFPTRPLYRGKPWFLPAAVAWY
RWKDQRQFRKALQMT
>gi|56709163|ref|YP_165208.1| spermidine/putrescine ABC transporter, periplasmic substrate-binding protein [Ruegeria pomeroyi DSS-3]
MKTRTILTITAAVMATGAFAQGKSVTIASWGGSYQEAQSKALFEPAAANTGIEVKQETYGGMSDVRLQVS
SGQVTLDIVASGSGSAARAAAEGLLEKLDYNVIDVSTFYPGLYTDYCIGGDVFSTVYAWNTNTYGENGPQ
SWADFWDVEKFPGSRAYRGKVAGALEGALMADGVAPADVYSVLDSEEGIERAIDKIRELKPHISVFWTSG
AQHAQLMKDGEVDMTTGWNGRFDNAAKDGAKVAYSFNQALLDYDCFAVPKGAPNRDTAMMFLNEISKPEY
QDDLPKYITYGPTNKAAYETGEITADVAAGLPSSPANAAMQLPVSLDWYAKWETIAAEMYQEMLTE
>gi|56709164|ref|YP_165209.1| spermidine/putrescine ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MRGFVLTSTTNEALPISVKNVTKTYGPVHALNDVSLEVRSGEFLTLLGPSGSGKTTLLMVLAGFTRPDCG
SLKFGDREVIRTPPHLRDVGMTFQSYALFPHMTVAGNVGYPLKLRKVPKAEIAQRVEAALETVQLGGFGE
RRIDQLSGGQRQRVAVARAIVFEPRILLMDEPLSALDKKLRDQMQIELRHLHEKLGMTTVYVTHDQREAL
TMSDRIAVVNHGRIMQLATPRDLYERPANRFVADFIGESTFLPVSRQGDTVLFDGTPLLHDSPPPEAASL
LLMIRPERVVLSREGPREGANNFAATATEVVYQGDSFLLHAALANGEQIVLRGAMRGANVTALPAVGEAL
TLCLAPEDTVLIDGSEA
>gi|56709165|ref|YP_165210.1| spermidine/putrescine ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MEAVRTNEAGLRRDEWLERLKLFGLGSPAILLILVILVLPVGWLFYVSFIGADGNFSLENYERMLKRKSY
ARIFQTTFEVSFLTTGLCILIGYPLAYFIAGLPNRIANLCLITVLLPFWTSLLVRTYAWLVLLQKRGLVN
EWAISLGLWDEPIKIVHNMTGTLIGMVHIMLPFLILPVYGAMKAIDRDLMKAASNLGASPRRAFWTVFFP
LTLPGLFAGSLMVFILCLGFFVTPAVLGGGKVIMVSMKIVSNIELFVNWGAASALGVVLLVSTMVILWIA
SRFLNLEKMTGGGH
>gi|56709166|ref|YP_165211.1| spermidine/putrescine ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MLRWFRSPATETQITHGQRLWLYVIAVITMILLVTPTLIVVPMSFSDSQYLEFPPETWSTRWYDHYFGSP
EWMLATRTSFKAAFLTMLVATPIGVLAAYGLHSSKIRFVRAAFVLMITPMMVPVVLVAIGAFYAYVQLQI
LYTITGLVLAHTVLALPLVVIVTGSALKSFDMSQEEAARSLGAPRWKAFLTVTLPQIRFAVVTSALLSFL
TSFDEVVVAMFVSGGDNPTLTRNMFNALRDQIDPTIASISTIMILVTTGMMVLAQLFGQQKTKPK
>gi|56709167|ref|YP_165212.1| hypothetical protein SPOA0385 [Ruegeria pomeroyi DSS-3]
MIENERPALADSLWTATANSAPDCPPLVGEAEADVVIVGGGFTGLSAALHLAEAGQSVVLLEAETPGWGA
SGRNGGQVNPALKPDPDDIVARFGDDLGRRMVARWGDGGRLVFDLIARHGIDCDARPVGFLRTATNTRGL
AMLSEIARQWRAHGAEYDDLDAAETARLVGAEAYLGAVIDRRGGNIHPLNYALGLAQAAIRAGAVLHGQS
RAIGFEDAGTGVSVRTELGQVKARRALVCTNAYTGPFGGALGRSVVPVTSVQVATAPLSDNVIRAILPED
HAPTDTRRLIQYYRKTADGRFVMGGRGARGEAGTRRRQQELRQAAETLFPQLGAADWVHAWGGDVAMTVD
SLPGLHRLGPNVMAGLGFNGRGVANATVMGTILADWVLGVPERALDFPVTPVRPIPFHFLKSAGVALTIG
AYRLLDRVNR
>gi|56709168|ref|YP_165213.1| GMC family oxidoreductase [Ruegeria pomeroyi DSS-3]
MSDYDFIIVGAGSAGCVLANRLSESGRFTVLLLEAGGSDLNFWIWMPIGYGKTFYKPSVNWMYHTEPDPA
LNGRVSYWPRGKVLGGSSSINAMVYIRGQAQDFDEWQGLGNPGWGWDDVLPYFRRAETNDRGGDAFRGDN
GPLHVASMERDLHPLCQDFIAAGGELQFPHNPDFNGATQEGVGTYQNTAKGGLRMSAARAYLRPALRRTN
LRVETGALAERVLFEGKRAVGVSYRQNGQVRTVRARREVILSGGAINSPQLLQLSGIGPAHLLQDKGVEV
VHALDGVGRNLQDHLCIDHLYRSRVPTLNTQLHPWHGKLWHGLRYVLTRRGPLSLGVNQAGGFVRSRPGL
DRPNMQLFFSPVSYTKAPPGKRPLMNPDPFPGFLLSAQPTRPTSRGHLEIRSGDPTEAPAIHPNYLSTET
DVQEMLEGAHLVRRFTETPALARLIEAELLPGADIRSDDDLIADIRQRAGTVFHPVSTCRMGPDTQRDVV
DARLRVHGIGGLRVVDASIFPTLTSGNTNAPAIMVGEKGADMILQDCGAGG
>gi|56709169|ref|YP_165214.1| LysR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MHLKLRHLEVFHAVMEEGSVSKAADRLHLTQPAISIALSRLEDMLGFPLFHRSKGHFAPRPEAYLLHLDA
ELSILAVEQFANRARLIKQGGAGLLRIGALGASAFGLLPQLVARFTADNPKVEIDLRVRSSHQISYLVSN
GQCDIGLVEAPVAAPSLEVEPFSLPCVCIFPAGSPLEAKDRITPRDLVDHRLIGIQDSNQVDRQLRAVCA
EAGFEIAAPVHGFFFAVVRRMVAEGAGVAIVDALNGCLPLNDGVSWRPFAPEIRYETALIMKAGAELSLP
AQAFIQMIRDEMRMCAILPETVRV
>gi|56709170|ref|YP_165215.1| acetyl-CoA synthetase, putative [Ruegeria pomeroyi DSS-3]
MKDQSSASAALNALLAPKSIALVGVSDRAESYGRALDRMVSEGGFAGRVMRVNPRLAAQSQGRIAASLDE
LPEPPEHVVLSVATARVEAAVDAALAAGARALTVFSACPDAAMRERIGDKVRAAGAALCGPNSMGFHNIT
LGLRVTPFPVPLDLRAGGVGLIAQSGSILGALMNNDRRLRFSQAVSTGSETVTTAADYLRWMVDQPETRV
VGLFLETVRDPQGFIAAMEAAAARDIAVVILKVGRSALSARMAISHTGALVGDDAVLRALVHRLGGHMAG
SLDEMAAMLALFAQGRRATAPGIASIHDSGGERELMADMAEDHRLDYAALSPATTAAIQAVLEPGIAAEN
PLDAWGTGQGARETYTRALAAMMADARVGTGLYVLNWRGNYYLHEMHAQALGDAFGQTEKPLAAVSNFSR
SDDAMLAGRFADLGIPLISGMQNAMAAVRALHDHGPVSRFRAPEPPHPRAQYWRDVLGGRDWIGEAEGLA
LFADFGIESPSHALVGTREEAFLAAERIGGPVVLKTAQPGLSHKSDSGGVKIGLATPQAVAEAFDDLAAR
FQGDILVAEMVAPGAEWSMGAINDPDFGPAVRIAPGGIFVDLIDEHVLLIAPFSAAEAAAAIDKLRAGKL
LAGLRGRPTLAASQLAHAAAALSRLAWDLRDTLAEVEINPIIVNTQGAMAVDAVIRAHPS
>gi|56709171|ref|YP_165216.1| MerR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MYTIGTLARRTGTKVQTIRYYEQIGLMPEAGRTSGGQRRYDEAALDRLAFIRHGRQLGFGLDAIRELLAL
NDQPGQSCSASDSIARRQLAQVQQRLARLRALEAELQRMIDSCDGHRGSDCRVLEVLRDHSECLTDHGSE
APVQS
>gi|56709172|ref|YP_165217.1| phosphonate monoester hydrolase, putative [Ruegeria pomeroyi DSS-3]
MGRQSNVLFIIIDQLRADCLWGALADHVELPHLRALAQDAVSFRRHYSVTNPCGPSRASILTGQYAMNHR
SVRNGTPLRHDTPNIATEMRKAGYLPLLFGYTDTSQDPRAYDANDPALKTYEFPMRGFHEVTEMRLEMSY
PWQSHLKNRGYAFDDYAQVYVPRPDADGTPRLNGPAMYRAEDSDTAFLTDQFLANMPAWAGQNWFAHLTY
IRPHPPLVAPAPYNTMYDPAKLPLPARLPGRDDETAEHPFFGPATRYSSPASFVLGFPDLEPTDETIQTL
RAVYLGLATEVDTHIGRVIAHLKETGQYDDTLIVVTADHGEMLGDRHSWGKMTVYDAAYHTPLIIRAPGC
KPGHVVEAPTESIDLMPTILDWVGQEIPNAVDGRSLRPFLTGEAPSDWRQYSFSELDISEPLDPTLWQQE
FGFGPSAGAVAILRDARFTLVEFAADLPPMLFDHQGEGEFRNVAGDPAHAADLARLSRQMLRHRMRNMDH
TLSLCSITHEGARTQRRYD
>gi|56709173|ref|YP_165218.1| cyclic nucleotide-binding protein [Ruegeria pomeroyi DSS-3]
MPLFAGLGAGELAALARQCDLRAYEKAQMVYAEGEAARSAYVIMYGQIDSIWYDKTGREVIFETRTRYDL
LGLHEVADGRGRPATSVCASRAALVHIPPGASRRLLDHPGVQAALARNARDELRNLRDSYRRAVLFDLET
RLAHYLLAQADPGRGRPHQLRIEENQLRIAAKVQASRTRVNTTIRKWRESGDIAVKDGAILLERTSRLWD
RFGPDQS
>gi|56709174|ref|YP_165219.1| RNA polymerase sigma-70 factor, putative [Ruegeria pomeroyi DSS-3]
MNQYSTIAGPFHAIHTPEEFGRAWRQHHPELMRRACRLAQGNPVLGEAFLARTTLRILEYLRSSDQPIDN
FQAFFAVSLRNTAQDHWRRYRRDMSIMAELGFHQARAEDPDATLRRVIARQDLDTLCAALSRMSCDQARL
VRLRVFESLPYGEIARRLQISEPLARKRMQVARNALRQQIEAGKSCLSRHEPGFAASIPAKAHQSLGGTH
GQ
>gi|56709175|ref|YP_165220.1| R body protein RebB-like protein [Ruegeria pomeroyi DSS-3]
MANDGSGTPVNSQITDAVTQSNVEVVAISPAQSMGMLYQMATHSAGLSLQNSVSSQQNLNQIANAVVATA
VREILSIGSGGGGGGGGGGASGGGKPKSD
>gi|56709176|ref|YP_165221.1| hypothetical protein SPOA0394 [Ruegeria pomeroyi DSS-3]
MAWVNLALTCGSFAGLRLAGLDAFVDFRDAETGRGGLHRATRGGHGHGTGQQQFGFGDDQTVLGGGGDLA
GHQILGHLLEHHRLAGHHQLGHAVEILRRRLRGEPRRLPDHLVGRGHDHRGGVILDLLVLEFHRLHHRRI
QRRSIDRALGHRPDRRPTSLAPCRSGGRRAKGQLAIGLTRRWRQCHFAHGPSLGLCLSLWRGSTGLVIKG
RRLGRVDQGLSLGDLILDRGDLGLGLGGGRFDGALGLALDTGEDLVTNLGNRLFQLRGRVHGAREFGCLL
GHDFLQKGPHLPKLSSIALGLAAARGAAASATASTTAADAEDLAHRRGDHRIGDLV
>gi|56709177|ref|YP_165222.1| hypothetical protein SPOA0395 [Ruegeria pomeroyi DSS-3]
MKILLRAFGNGGPMDAVAATLQTLCDQARSTVDQLNIDAPLTVGDDSIWSGYNPDGHGEFELNIRLLATL
HVRYNNTLTNPLAIGDVCRACADMISAAPRHPNTAPGLAPIAQLLHQLQNAQAFNKTTNRVRVKRRDILD
QMPGVGGTQWYLPPEDVLGNIDRLLGYYETGDISGTTTDGLGVLAMLSTVNVAAIGTLDQIKQQLAAMVN
NGLAFTSFAGMVVQMHHSLPECMMAINLMPRDLGVDNSAITQIYSPFLTNTGLGDINNVYNEWRQARYTA
LGGAGQVPDNATQMLIVVQDIFQMPNRATAAHEVALILPVTAQGMTNNAFVFGSNFYNWIVGALNTANPG
PAITLEKLSSAVFDQWFGPDFNPAIVNPQFGPEVVACVEQGMALPRNQLQNAGQYRQIVAPFVGQAEYGQ
VEPAQVGNLN
>gi|56709178|ref|YP_165223.1| hypothetical protein SPOA0396 [Ruegeria pomeroyi DSS-3]
MYEEIEFLRSRTDELLVQVLSQWSASVMSSRDRGLPPYSSLAADLAAARDRLAAAAQAAVELDGWDYVVE
CDEVSGEERVEMDVETREVKSTTVRKGGRK
>gi|56709179|ref|YP_165224.1| hypothetical protein SPOA0397 [Ruegeria pomeroyi DSS-3]
MSGFAEELPRLLAVGRNWVGRELHEDEVIGLVNWLKSETAHNPAAAGQIDRGLAAASSVIAQGRQAAEGA
IADAFRSVRGAPAPPQAPGQAPPPSLHERVTRTEQRVLEQVLKSGVVGEARIDPAMEAQFAQLAEHLANL
IETEVVRQVELRMVEFDARTGARIEAQSAQVVELCNQLSAEIRQQLARDLRAETALRPARPAAQKKS
>gi|56709180|ref|YP_165225.1| R body protein RebB-like protein [Ruegeria pomeroyi DSS-3]
MPYNTAVNSQITDAVTQSNVQVVAQAPAMAMGSVYQSMAHSTGILLQNSVAAAQQQSALSQAAANQGVMQ
IYSLDTTAAAGASEKIGQVGTPDQMSSLLAVLNSFGG
>gi|56709181|ref|YP_165226.1| R body protein RebB-like protein [Ruegeria pomeroyi DSS-3]
MTWPTAVNDQITDAVTQSNVKVVGEAPAMAMGTVYQTMAHSTGILFENAVAAAQQQNALSQAASNQGVMQ
IYSLDTTATAGASEKIGQTGVADNLTSLLTVLNAFKRPQQPGGI
>gi|56709182|ref|YP_165227.1| endoribonuclease L-PSP family protein [Ruegeria pomeroyi DSS-3]
MTHKTIQPEGWAPAKGYANGMLTRDGHLYVGGQIGWNAQQQFESHDFIGQMEQALRNILDVVEAAGGRAE
HITRLTWYVIDKKEYMARQSEIGASYRKVMGRHFPAMAMVVVSGLVEDDALVEIEATAVID
>gi|56709183|ref|YP_165228.1| benzoate-coenzyme A ligase [Ruegeria pomeroyi DSS-3]
MLGPSAHIDTFTRDNLPPTDQWPDFLLDGFDYPEHLNVGVELTDAMVDKGFGDHTALIGNGRRRTYKELS
DWTNRLAHVLVEDLGVKPGNRVLIRSANNPAMVACWLAATKAGAVVVNTMPMLRAGELAKIIDKAEITHA
LCDTRLMEELVSCAKTSKHLRTVVGFDGTSNHDAELDRLALQKPVRFQAVETGRDDVALLGFTSGTTGDP
KATMHFHRDLLIIADGYAREVLGVVPEDVFIGSPPLAFTFGLGGLAVFPLRFGAAATLLEQASPPNMVEI
IQQYRATVCFTAPTAYRFMLKAMEEGADLSSLRAAVSAGETLPAPVYDEWIAKTGKPMLDGIGATEMLHI
FISNRFDDHRPACTGKPVTGYQVRILDENGNEAPRGEVGRLAVRGPTGCRYLADDRQSGYVQNGWNVTGD
SFVMDDDGYLHFAARSDDMIVSSGYNIAGPEVEAALLSHPAVAECGVIGAPDEARGHIVEAHVVLTPGHT
GDALMVKTLQDHVKATIAPYKYPRSVRFIEALPKTQTGKIQRFRLRTDIQ
>gi|56709184|ref|YP_165229.1| cupin domain-containing protein [Ruegeria pomeroyi DSS-3]
MTKDLEKGITENGTGYDGVVWNILGQTYYPKAVCETTFAFETNSEPGQFVPVHVHPTQDEFILVQEGELD
LKLDGVWSKARAGDLVRMPKGIPHGYFNKSDKPARALFWVSPARKLKELFEALDNLEDVERVVELSAQHE
VDFLPPEAND
>gi|56709185|ref|YP_165230.1| acyl-CoA dehydrogenase family protein [Ruegeria pomeroyi DSS-3]
MADRSFLTWPFFDETHRARAEAMEGWCARLHVDHGDIDAACRKLVADLGAGGWLQATAAVEGERLDVRTL
CLSREILARHDGLADFAFAMQGLGTGAISLFGTPEQQAEWLPLTRSGQAIAAFALTEPQSGSDVANSTMT
ATADGDDYVLNGEKTWISNGGIADVYTLIARTGEAPGARGLSAFVLPAGLPGFEVVERLEVMAPHPLARL
RFTDVRVPKSALLGAPGEGFKVAMAVLDVFRSTVAAAALGFARRALDESLARVTTRQVQGAPLFDLQMVQ
GHIADMALDVDASALLTYRAAWAKDMGAPRVSREAAMAKLYSTDHAQQVIDKAVQLFGGDGVRRGEKVEE
LYRDIRALRIYEGASDVQRVVIARQVLAQG
>gi|56709186|ref|YP_165231.1| enoyl-CoA hydratase [Ruegeria pomeroyi DSS-3]
MSAADTTHFLCTIEDGIARIALDRPERKNPLTFDSYAELRDWFRDLHYNDDIKAVVFASNGGNFSSGGDV
HDIIGPLTRMNMKELLQFTRMTGDLVKAMINCGKPVIAAIDGICVGAGAIIAMASDLRIATPEAKVAFLF
TRVGLAGCDMGACAILPRIIGQGRAAELLYTGRAMNADEGAAWGFHNRLVAADALEDEARKLASQIAAGP
NFGHMITKTMLAQEWSMSIEQAIEAEAQAQAICMQTGDFERAYRAFVAKEKPVFLGD
>gi|56709188|ref|YP_165232.1| MarR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MSAPNPRPDAGPDSKARLRLWLKLLKTTRAVESGLRENLRTEFASTLPRFDVMSALARNAGGLKMSELSG
LLKVSNGNVTGIIERLVEDGHVLREPVPGDRRANRVRLTRKGEEEFARQAARHETWVDGLLGSLDADEAR
AITATLDRILTEGKS
>gi|56709187|ref|YP_165233.1| D-beta-hydroxybutyrate dehydrogenase, putative [Ruegeria pomeroyi DSS-3]
MMLEGAHAVVTGGGTGTGAAIAEALAHAGAKVTVLGRREAPLREVAKQHKFIGWVTCDVTDPQAVRTAFR
QARELNGPVGVVVANAGAADSTPFRKMSAEGFQQMLDVNLKGVFNSFQAGLADMETAGAGRLIAIASTAG
LKGYPYVAGYCAAKHGVVGLIRALAVELGRTGVTANAICPGFIETPMLDRSIANIVDKTGLSAEAAAKSL
RKGNPQDRFIQVDEVAGAVLWLCSQAARSVNGHALALSGGEI
>gi|56709229|ref|YP_165234.1| salicylyl-CoA 5-hydroxylase [Ruegeria pomeroyi DSS-3]
MRIACLGGGPAGLYFAISMKLRDPSHQVSVIERNKGDDTFGWGVVLSDDALENLAANDPISAETIRSNFA
YWDDIAVVHDGVRTVSGGHGFAGIGRKAMLLLLQDRARELGVDLQFQTEARPIAEYQAEYDLVVACDGLN
SRVRSDLAAHFKPDIDTRQCKFIWLGTHQKFDDAFTFIFEKTEHGWMWVHAYQFDEDTATVIVECSQETW
DAWGFEHMSKEDSVATCERIFAAHLGGHALMSNASHLRGSAVWINFPRVLCEKWHHENVVLMGDAAATAH
FSIGSGSRLAFDSAISLATYLHSEPTMESAFERYQEERRLEVLRLQSAARNSLEWFEQVERYLDMDPVQF
NYSLLTRSQRISHENLRLRDADWLRSAEQWFQTRAGAAAEPVRAPMFAPFRLRDMELKNRIVVSPMAQYK
AVDGCPTDWHLIHYGERAKGGAGLVYTEMTCVSPKGRITPGCPGLYAPEHEAAWKRLTDFVHGETSAKIC
CQIGHSGRKGSTQLGWETMDAPLKAENWDLISASPIPWSANNATPREMTRADMDAVRDQFVAAAQMAERA
GFDMIELHAAHGYLISSFISPMSNNRSDEYGGSLENRMRYPLEVFTAMRAAWAEERPLSVRISANDWVEE
AGVTPEEAVKIAAMFHAAGADIIDVSAGQTSIEAKPVYGRMFQTPFSDRIRNETGIATMAVGNIYEADHA
NSILMAGRADLICVGRPHLADPYWTLHEAARIGDRHADWPLPYLAGRDQAWRLADRDAETEIRA
>gi|56709189|ref|YP_165235.1| hypothetical protein SPOA0408 [Ruegeria pomeroyi DSS-3]
MIDWDDAFDNSSYVPGSGGLAAAWGAAAAAWRKNRGGTLDIAYGRGARNRLDLFCPEGAAKGLVVFVHGG
YWQKLDKSFWSHFAAGPLSRGWALAVPSYTLAPEARLGQMAEEIRAAIEEAARHVAGPVRLAGHSAGGHL
VARMACADGPLPDRLDRVISISGIHDLRPLLGTRMNEVLHLDAAEAEAESPALLSRRAGLSVTCWVGANE
RPELVRQTRLLSEAWNVPNVFDPGHDHFSVVAELGRPGSALLTELLKD
>gi|56709190|ref|YP_165236.1| tryptophan 2,3-dioxygenase, putative [Ruegeria pomeroyi DSS-3]
MSQAYDPSQEGAKMSYAKDMSYGDYLHMDALLATHHPQSDAHDEMLFIIQHQTSELWMRLVLHELRAARA
LLLAGGDFRPAFKMLTRVARIFDQLNSAWDVLRTMTPSDYTTFRNALGNSSGFQSHQYRLIEYMLGNRNT
AMMKVHEHRPELHAMLAAELEQPSLYHVALRALAAKTGASFAPEVYRMDNPHSADAAVQAAWRQVYEDPA
KYWDLYELGEKLVDLEDYFRRWRFNHVTTVERVIGFKRGTGGTSGVQYLRRMLEVELFPELWHLRGDL
>gi|56709191|ref|YP_165237.1| hypothetical protein SPOA0410 [Ruegeria pomeroyi DSS-3]
MPELFNSDIEEAPEARLEDTSVMSSISSGDEGDEGNEDNEGNENDEGNEGNEISASTYDDDHNEGNEGNE
GNEGVDGQEDDEGNEGDEGNEGNEGNEGNEGDEGNEDDEGDENDENDENDEHNEADEGNEHDEGDENFSI
ISNNTDGQIDLSEADEGNEFDEGDEDSTYWDFNFDDEYDEGIDANMHEADEGDEGDEGDENNEGNENNEG
DEGNEGDEGNEGDEGLINIGLEGDEGNEGNEGDENDEGNEGNENDENDEGDENNEADEGNEFDEGDEDGE
FFGRGQEADEGDEGDEDDEDDTFGGLLEEADEGNEGDEGDEDDEGDEDDEGDEGDEGDESQNGDEGDEGD
EGDELNDGDEGNEGDEGNEGNEANEGNEGDEDNEGNEGNEGNEGNEGNEANEGNEGDEDNEGNEEDEGNE
DNEGNEGNEGSEGNEGDEGDEGNEGNEGNESNEGNEGGLNDEGDEGDENDEGNENDEGDENNEGDEGNED
NEGNEEDEGNEDDEGDEDNEDDEGDEDDEGDEDDEGDESLEPDHPSRHDEGDEGDEDDEGDEDADALLDD
EGDEGDEGDENDDGNEGDEDDNLADSGNEDDEGDELNEPDNGDEGDEHDEGNEHDEGDEDDEGDEGDEGD
EGDEDDEGDESV
>gi|56709192|ref|YP_165238.1| hypothetical protein SPOA0411 [Ruegeria pomeroyi DSS-3]
MPTAPPLRSDPKLRRAGPDQNDRIRPTVASVGITRSRRLRRLHPPRRLRRLRLPRRLRRLRHVRCLRHAR
RLRRRCRARSARRLRRLRCRNRQGCRLRRLRCRRHSRPPHRLRPPHHRAEHRHPRRLRRPRRLHRPRRAA
RGGRAQGIRRPRRLRRPRRLRRLRRLRCPRRLRRPRCLRLLRCLRYPRCLRRPRCFRRPRRFRCPRRFRR
PRRPRRSGRPHFLRCFRCLRCLHCLRPPHRLRCPRCLHFPRCPRCLRCLRPLRFLRCLRRPRCLRWLRFL
RCPRCLRCPRFLRCPRRPRCLRWPRYPRCLRRPRCPRRRRSVRRLRHPRHPRRRSDSRRPRHLRRPRHPR
RLRHPHRPRRLRCLRRLPLGGHQKCRPRRLHRLRRLRQLPGLCRRTRHLHRLRRTRYLRRLRYSRRLRRS
RRSRCLRCLRRSRRPRCPRYLRPLPGQY
>gi|56709193|ref|YP_165239.1| xanthine dehydrogenase family protein, medium subunit [Ruegeria pomeroyi DSS-3]
MQYHSPDSFAQAARLAAEAEGITRFLAGGTDVLVQLRADIVTPDTLIDIKKIPGTHDITRNGDGSWTLGV
AVPGAELGEHAGLVADWPGVVEAMNLVGSTQVQGRATLTGNLCNGSPAADSVPAMVAASMTATVTGPDGE
RVVAVEDIPTGPGRTSLAKGELVSALHIPARGANAGDAYLRFIPRSEMDIAVVGCAVNLRLDGDTITEAR
VSLGAVAPTVLLVQDAAAAIIGSTLDDAALDRLAAAASAACKPIDDKRGTIAFRTEVAGVLAKRVARIAY
ARAKGEIIRGHHG
>gi|56709194|ref|YP_165240.1| xanthine dehydrogenase family protein, small subunit [Ruegeria pomeroyi DSS-3]
MSKIHVSTTVNGDAVEYLCDPRETLLDCLRDKLSLTGAKEGCGTGDCGACSVTLDGRLVCSCLVLGVEAE
GKEIGTVEGIAEGDVLHPLQQKFIDYAALQCGICTPGILVAAKALLEQNPDPTEEEVRFWLAGNLCRCTG
YDKIIRAVMDTARDMREAV
>gi|56709195|ref|YP_165241.1| xanthine dehydrogenase family protein, large subunit [Ruegeria pomeroyi DSS-3]
MALDDRKSDGFTFVGTRPNRPDGLDKVTGRARFGADAHAPGMLHGAILRSPHAHARILRIDTSKAEALKD
VKAVVTRADFSDKVEFAPGLEGDFWNILENVMAGDKALYDGHAVAAVAATSALAARDALKLIEVDYEVLP
HVTDVDKAMLMDAPVIRQGAADYSVPEGMHPNVVRKHESGHGDVEAGFAEADLVIEDHFTTEATHQGYIE
PHACLATLGADGKGELWCCTQGHWIVQKTCAALLGIETANLRVTASEIGGGFGGKTTVFIEPVALALSRK
ANKPVKLVMSRSEVFRATGPTASASMDIRIGMKKDGTLTAAQGTFRLQGGAFPGGPADFTAMCAFAPYNL
PHVRQVGYDVMTNRPKQAAYRAPGSPMAAFAVESVIDELCNQLGLDPIEVRLKNASREGTKASYGPRFQR
VGLVETLEAAKAHPHYTAPLKPGQGRGISCGFWFNHGGETSVSLALSEDGSAQVMVGTPDIGGSRASMAL
MAAEVLGIPYENIRVTIADTATLGYNDVSHGSRVTYASGLATIKAARHAVEKLCERAAKKWGIPVDAVKW
ENGCAVPSGPNAGEFDPLPLADITADMGRTGGPISGHFEATPEGAGVSFATHIVDAEVDPETGKTKVVRY
TVVQDAGKAIHPTYVEGQFQGGAAQGIGWALNEEYIYGADGRLQNSVFLDYRIPVASDLPMIDTVIVEVP
NPGHPFGVRGVGETSICPPLAAIANAVSAAAGARMRQLPMSPPRILAALKADG
>gi|56709196|ref|YP_165242.1| hypothetical protein SPOA0415 [Ruegeria pomeroyi DSS-3]
MVEVHLWSGLRSLAGGCEVVSVEARDTGEMLRALVRAHPELQAPIDAGVSVAIDGRVIASGLTEPIPEGA
EVYLMQRLRGG
>gi|56709197|ref|YP_165243.1| hypothetical protein SPOA0416 [Ruegeria pomeroyi DSS-3]
MSLIPGGKTVYGATVGILMLETRFPRIPGDMGNALTWPFPVQYRVVRGASPDRVVRGDPRALLDTFVEAG
RDLVATGADGITTNCGFLALVQEELRAALGVPVATSSLMQVPMVQALLPPGKKVVILTISKATLTPAHLA
AAGVPLDTPVYGTDAGRVFTRDILGDAPQIDFDACRLDMLDAADEIVAQEPDAGAIVLECTNMVPYAADL
RRRTGLPVYSIYSMVSWFQAGLMPRRFEQPLDDPRS
>gi|56709198|ref|YP_165244.1| GntR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MTKSESNVDRLYQALRRMAADFAFKPDARINESALATQLDASRTPIREALNRLVAEGFLTFRSGRGFFCR
SLSPELVMDLYEARVAVEVEAARLAALRGDEREIAILMQDLEDIAPDYTARADTEALLSMDEWFHTRLCA
LSGNGELARMLDNLNDRIRYLRLIDLRRLQALGPQGQTMVSAHQRILDAVARHDADGAMAEMRAHIERRR
EGATQAVRDAYAQLYVPEL
>gi|56709199|ref|YP_165245.1| acetolactate synthase, large subunit, putative [Ruegeria pomeroyi DSS-3]
MDNRMNGAEAMVRMLEAQGVRHIFGLCGDTTLPFYDAMLRLDHQITHVLTRDERCATYMADGYSRVTGRV
GVAEGPSGGGATYILPGLIEASESSYAVLGITTDISVASYGKYPLTEVDQKALMAPLTKWNTVISRADHI
PRMVRAAFRAMTTGRSGAAHIGLPYDVQYDPVDAADIWADPVTASYPAYPQSPAPGAAQAAVEAILSAKN
PLIVCGGGVVIAQAWEELDRLATRLDIPVATSISGQGSLAETHPNCLGVVGSNGGTDETWEMMEAADLVV
FMGCRAGSTTTARWEAPKPGTRIVHFDNDPMVMNANYRTEVAVVGDLRLALAEVNAALDARAQGADTFGG
AAAVAEKKTRKFEAFEVLARSDQAPIRPERVIRALMNTLPEDATVVSDPGTSCPYFSAYYQLPRPGRHFI
TNRAHGALGYSLSAALGAWYGRPASKTVALMGDGSLGFTVGELETVCRSRAPITYVVFSNATFGWIKASQ
FADKDARYYNVDFNRTDNAAIAAAYGVKSWRVEDPAELERVLAEAIAHDGPTLVDVITQPLEESNAPVRR
WMG
>gi|56709200|ref|YP_165246.1| PhzF family phenazine biosynthesis protein [Ruegeria pomeroyi DSS-3]
MTPNVDRIAAFSDGTLGGNPAGVVIADQMPAEDEMQRIAAEVGYSETAFAAPQGDGWRVRYFAPVGEVAF
CGHATIALGATLAGRFGDGTYALHLNDAGISVEGLRHGDQVQAALISPPTRSSAVDAEVLEAAMALFGLD
DTDLDPTLPPAVANAGNDHLVLTLRNRSRLATMDYDLNRGAAYMRLNGFTTINLLWVETPQRFHSRNAFA
IGGVLEDPATGAAAAALAGYLRDLGWPHGGNIDIVQGEDMGARSLLRVEIGTTPGDGVRVSGSARQIG
>gi|56709201|ref|YP_165247.1| hypothetical protein SPOA0420 [Ruegeria pomeroyi DSS-3]
MLRTLLNTAATITAGSLFSAGVMTLGFYILPSSLLAGEPALTRFATETHARFAIAADGEERFAQVN
>gi|56709202|ref|YP_165248.1| pyridoxamine 5'-phosphate oxidase family protein [Ruegeria pomeroyi DSS-3]
MPRAFSQLTFTPAVRAHQERLGSARSYAKFIEGGPQQGHEIGPAEQAFIEARDGFYQATVSEIGWPYVQY
RGGPAGFLRVLGPRTIGYADLSGNRQYISRGNLDGNSRVALILMDYANQRRLKILGRMKFTEGPEAAASL
LPDGQTHPAERAAIISVEGLDWNCPQHITPRYTEAELAPHLNALGAELAQLRAENERLKQQLSEQD
>gi|56709203|ref|YP_165249.1| hypothetical protein SPOA0422 [Ruegeria pomeroyi DSS-3]
MTRPPLPPFTAETAAEKVRLAENGWNNRSADVVTPAYSDDSRWRNRAEFVTGHDDIHAFLTRKWDKELDY
RLIKELWAWSGNRIAVRYAYEWHDDSGNWFRSYGNENWEFDEDGRMSARHTSLNDLPITEDERLFHWPLG
PRPDGHPGLTDLGL
>gi|56709204|ref|YP_165250.1| TetR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MRPNKKDELVRKALTVFYRDGFHATGMDKLVAETGVSKTSIYKHFRTKEELIVAVLKLRDENFRAWFEAR
VDELADTPADKFLAAFDALGEWFEEDSYRGCMFINAGAEYNCKDDPIRMEAAHHKQVVLDYFTDLARQAG
ARDPEALGCQILLLKEGAIVISSLMGNSKPACDAKDTARILLDNALKG
>gi|56709205|ref|YP_165251.1| fatty oxidation complex, alpha subunit [Ruegeria pomeroyi DSS-3]
MGDFHYAKDADGIVTVTMNMDGPVNAMNAEFWPLFAATMDRIEAEPELKGVIWTSAKDTFFAGGDLKMLK
SIEPDGVEALFRSVEATKAVMRRMEKQPVPHVAAINGAALGGGFEICLACNHRIAADNPKTKIGLPEVTL
GLLPGGGGTVRLTWLLGLEGAMPFLLEGRQVSPDKALKAGLIHQVVPADQLLTRAKEYILSVQGDAAAVT
QPWDTKGYKIPGGPSTAPHNMTRIAGAAAMLFKKTRGLMPAPTRILDIMTEAAGKVDFDTATRYESRRFV
SLTPLASTKNMIETLFFGMNKVNGGASRPKGVPTSKVQRLGILGAGMMGQGIAFSAATAGLPVVLKDQTL
EAAERGKAYTATLLDKRVKQGRMSAEEREAVLALITPTDKADDLKGCDLIIEAVFEKIDIKDAVLAEHEA
LLAENGIWGSNTSTLPITRLATGATRPENFVGLHFFSPVDKMPLLEIIAGEKTSDETLARAFDFARQIRK
TPIIVGDSTGFYTSRTIGTKIIEAVELVAEGHDPLRVDNLSRLTGMPTGMLSLLDEVQIKLVTDIYNTQV
EMGLLDPDKEQNPAARAMLAEMISQHGRHGRATGKGFYDYDGQGKTIWPGLAAWRKEGADIPDADIKDRI
LFRAVLESLRCLEEGVLRTVEDGNIGSILGIGAPVHTGGYLQYVNTYGPARFLARCEELAGKYGDRFAPP
EILRTHVAEGRALA
>gi|56709206|ref|YP_165252.1| acetyl-CoA acetyltransferase [Ruegeria pomeroyi DSS-3]
MATPAYIYDALRTPRSRGKASGALYEVKPIQLAAGLLREMQARHDMDTSRVGDVILGCTAPVGDQGACVA
KAAVQAAHWDEAVPGVQLDRFCASGLEAVNMAAAKVGSDQEELVVAGGIESMSRIPMLSQGGAMFTDPDF
VIDQNSAPQGIGADLIATIDGYSREDVDAFAMESQRRAAHARDSGWFDRSVVPVRDENGLTILERDDFIK
PDTDMQKLGALNPSFAGMGAFGYDDMALAKYPQVARINHVHTPGNSSGIVDGSSAVLIGSEKAGRDLGLE
PRARIVSATVIATDPVIMLAGPGPAAKKCLDKAGLKVSDIDIWEINEAFASVALRYMKDLDIDHEITNVN
GGAIAMGHPLGATGGMLVSTVLDELERRGAKRAMISLCVGGGMGISTLIERL
>gi|56709207|ref|YP_165253.1| AraC family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MAVTIPATIVANILEGAVARGADPAAILARASLPGVVGPLEAPDFVRLVRAVTLTLDDELAGLQDRPQRI
GTHAIMAAHVSHAETLGAAYARAAGFMDLMDNSFRYSLRESGANLIFEMTRIPGREVLNNAAVEMVLVLV
SRMLAWLVGNRGALNGAWFDYVAPGHVAAYRAMFQRAPMQFGQCSSGLAIPLALTRLPVLRSEDQATAYA
RRTPLDAFLPQDATTGLPLEVAVAVEACLSEQGRLPDMAQVARDLNLAPHTLRRRLKGDGVDYSNIRKQV
RRDMAVRLLATTGDSVESIAAQTGFSEASAFIRAFRSWTGLTPRAYRKSEL
>gi|56709208|ref|YP_165254.1| ArsR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MTVQDAPSLPPETPDDMASNAARAAGYLKTLAHEGRLMILCHLGAGEKSVGQLENLLDIRQAAVSQMLAR
LREEGLVSTRREGKTVFYSLSDSNTEQVIGLLYSLFCSND
>gi|56709209|ref|YP_165255.1| mandelate racemase/muconate lactonizing enzyme family protein [Ruegeria pomeroyi DSS-3]
MRLQDLDIIVTAPPAPGWGGRYWILVKVTTDTGITGWGECYASSVGPDAMTHVIRDVFDRHMAGENPENI
ELMFRRAYSSGFTQRPDLTVMGAFSGLEIACWDILGKDRNRPVHALIGGRMNQRIRAYTYLYPLPHHDIA
GFWTSPDQAAECAAEMVRRGYTAVKFDPAGPYTIRGGHMPAMSDISLSVAFCKAIREAVGDKADLLFGTH
GQFNTAGAIRLGQALEPYAPLWFEEPTPPDNLEDMARVARNVRIPVATGERMTTKTEFGAVLRAGAAEIL
QPALGRAGGIWEMKKVAAIAELFNAQMAPHLYAGPIEWAANIQLAAAIPNILLLESIETPFHDALIKGSI
RVDNGFVIPPDAPGLGIEVDEELARAHPFTGNDLHLNMQEAPCDYASGNAFQGGAPTI
>gi|56709210|ref|YP_165256.1| hypothetical protein SPOA0429 [Ruegeria pomeroyi DSS-3]
MIKRILAGLGLVILALVAVIAFRTVQYRPGPVEASQPFSVGADIDRAAQVLAEAVRFRTVSTDMSHPDFP
AFLAFLEQSFPAVHRTMERTLLEPVTPLYKWQGSNPDLPPVMLAAHYDVVPVTEDTLGEWDHPPFAGVVA
DGFVWGRGTLDNKGALIAALTAAEKLINDGFTPERTIYFSFGGDEETGGLGAIAVAEHLRAQGVQLAWVL
DEGSFVLDKIIPGLDVPVASINLAEKGYLTIQLVAHAEGGHSSMPPRHTAVGQLARAVARLQEAPMPGGL
TGVSAEFFDALGRHFSIDKRAIFANRWLFDPVLEGILSGSPSTDAMLRTTTAPTMLEGSPKENVLPTRAV
ATVNFRLHPRDSIDDVLVHVKAAIDDEGIEIVADRDLASPASPVSDSQGAGFKDVEASIREVFGPIASVP
GLTIAATDARHYAKAADAAYRINPFQIEGDDLARFHGIDERLSIANIERGINFYAALIGKQ
>gi|56709211|ref|YP_165257.1| zinc-binding dehydrogenase family oxidoreductase [Ruegeria pomeroyi DSS-3]
MQKIRAAVCHEFNAPLVIEEVLLAPPGTGEVEVTLDAVAICHSDISYADGAWGGHLPAVYGHEAAGTVSA
VGPGVEGFAPGDPVVVTLIRACGTCANCAGGQPTICDTPYDGVKQGPLRTADEGPLLQAMACGAFAEKVV
VSQRQIVRIPADMGRDVACLLSCGVITGVGAAVNAARLRAGQDVVVIGAGGVGLNAIQGARIAGARRIVA
VDMTEEKLDIAREFGATHGVLATSPKPWRAAYKALGGRGADAVLVTVGAVRAYDEAPKYLGWGGRAVMIG
MPHAGAMAQYEPMSASFQGHGLIGSKMGDVVIQRDIPWMIDLYQQGRLKLDELISGRWSLDQINEAIADT
RTGSAKRNVILFNH
>gi|56709212|ref|YP_165258.1| tetracycline resistance protein [Ruegeria pomeroyi DSS-3]
MRLPFLFILATVMIDAMGIGLIMPIMPDLIVEVKGGTLADAALWGGVLSTAFAAMQFLFGPVIGSLSDAL
GRRPVLLVSLFVMALDYVVMALAGSIWLLLAGRIVGGITAATHATASAYMADVSRPEQKAARFGMLGAAF
GVGFVLGPLMGGVLGEFGTRAPFWAAAVLAGLNFVLGLFVMNETVTAATRRAFSWASANPLGAFRMLGQV
PGLKGLLWAYFLYSVAIYVYPAIWAYFSQERFGWSSRMIGLSLGIFGFLMAVVQGGLLPHITRRIGERRT
VIWGQLFDFVGFGLLAFIASGTLALILIPITAMGAVVPPALQAIMSRSVADDQQGALQGVMSAVHALSMI
VSPLLMASVFARFTGPQAPIYLPGAPFLVALALMAAGLVIFLRTRTAVT
>gi|56709213|ref|YP_165259.1| 3-carboxy-cis,cis-muconate cycloisomerase [Ruegeria pomeroyi DSS-3]
MAASVFDSAHLARLFPAGDAGRLFTDGAELRAMLLVEGMLAKAQGALGLIPVESAGAIHRAAMEIHLDPG
ALAEATGANGVSVPALVAAFRSEMQAPEHAQYVHWGATSQDIIDTGLMLRLRQAVSVLERDLAAVLETLA
ALAESHADLPMAGRSYAQHATPTSFGAVVASWGAPLLDLLRELPGLRRDCLLVSLSGAAGTGAALGPEVA
QLRADLAQLLNLADPGRSWHTDRTPVLRLAEWCTRIALALGKLGEDAIELSQTGIAEITLGGGGASSTMP
QKQNPVGASALVALSRQVPGLLAVLHGAGVHRHQRDGAAWFTEWMCLPQIVLGAAASVQITQRLLPGLAP
CPEAMAAALDTNYGTIHAEAVNFALAAHLPRPEAQAAVKTLCAEAMESRTPLRELIARDWPQLDAAALTD
PSRQLGAAPDEARAFAARVRSQGAT
>gi|56709214|ref|YP_165260.1| esterase EstC, putative [Ruegeria pomeroyi DSS-3]
MADFLLIHGSCHGAWCWRDLIPALEERGHTARAVNMPSHGSDVTPIGEVTLNSCRDAVLGASTPDTLIVG
HSWGGYPISAAAEQAPDAMRGLIYLCAYVPLSGHSMIDMRKRAPRQTLLDAVIKSEDGLSYTVDPERVAD
LFYHDCRAERVHYAQPRLCPQAIAPQETPLTLSDRFASVPKVYIRCAEDRTIPPEYQEEMTADWPSDRVH
VMNSSHSPFFADPQGLARLLTRIEGQF
>gi|56709215|ref|YP_165261.1| 3-oxoadipate enol-lactone hydrolase [Ruegeria pomeroyi DSS-3]
MQIADLGDIKLHFRVDGDPDGAPVVFINSLGTDLRLWDPILPHLPAGLRLIRYDKRGHGLSDAPEGPYAM
GTLVRDAERLLDLLDIRDAAVVGLSIGGMIAQGLAVKRLDQVRALVLSNTAAKIGTKEMWQQRIAAVTAG
GIEALADTVMERWFSRGFRATPELALWRNMLVRQPVQGYAGCSAAIAGTDFYTPTSGLRLPTLGIAGDED
GSTPPDLVRETVDLIPGSQFHLFRKAGHLPCVEHPAAYAERLAQFLRDVGHF
>gi|56709216|ref|YP_165262.1| pyridoxal-phosphate dependent enzyme [Ruegeria pomeroyi DSS-3]
MSTLELIEAAAERLSGHVRRTPLLSSPFLDEIAGRRVLVKPECLQHTGSFKFRGAWSAISALDPEARARG
VIAFSSGNHAQGVAHAATLHGIASVIVMPSDAPRLKIDNTRALGAEVVLYDRGRESREEIGTALAGERGL
TLIRPYDEPQVIAGQASVGLELAEQAGELGVESGDVLVCCGGGGLTSGVALALEARAPGLRARPVEPEGF
DDVKRSLAGGTISRNNSETGNICDAILTPEPGRITFPILSRLCGPGLAVTEDEALRAMALAFLRLKIVLE
PGGAVSLAAALFHPDQVEGDTVLAVASGGNVDAALFRTALELHA
>gi|56709217|ref|YP_165263.1| alpha/beta fold family hydrolase [Ruegeria pomeroyi DSS-3]
MAAFTTTDGLRLFYEDEGTGQPLLCLAGLTRCSRDFEFLRPHVTDLRLIRLDYRGRGQSDYDPDYRNYNV
LREAHDVIELLDHLGLDRVTVLGTSRGGMIAMALAASHPDRLAGVILNDVGPVIEPAGIARIMDYVGKKP
VSKTHDQAALALKQAMEPQFPGVPLSVWRKQAEIQYAASDQGLALRYDDGLHKALLDQAATGAIPDLWLF
FEALRDIPTAVLRGANSDILGAGTVAEMHRRHPGLISAEVPDRGHVPFLDEPQSLDLIRRILETA
>gi|56709218|ref|YP_165264.1| haloacid dehalogenase, type II [Ruegeria pomeroyi DSS-3]
MPITTCIFDAYGTLFDVAAAARQAADEPENAALRPHWQALASHWRLKQLQYSWLRAITGAHTDFWQVTGE
GLDWALEAVGLAGDAVLRQRLLDLYWQLQAYPEVPAMLRALKGAGLETAILSNGSPDMLDGAVRSAGLGD
VLDDVLSVESVGIFKPDRRVYDLVGQRFGCPPEAVLFVSSNGWDAAAAAGYGFRTAWVNRAGEPVDRLPW
TPDHILSDLTGIPELAGV
>gi|56709219|ref|YP_165265.1| peptidyl-prolyl cis-trans isomerase, FKBP-type [Ruegeria pomeroyi DSS-3]
MTQIKQGDTVRIHYTGTLLDGKTFDSSEGRDPLEFTVGSGQIIPGLDKAMPGMETGEKKRVEVPCAEAYG
PLNPEARQAIPREGIPDDIPLELGTQLQMQSPDGRVIPVTVVELEEATVTLDANHPLAGQDLIFDIEVVS
IN
>gi|56709220|ref|YP_165266.1| enoyl-(acyl-carrier-protein) reductase [Ruegeria pomeroyi DSS-3]
MSGLLQGKRGLIMGVANDRSIAWGIAKAMHEAGAELAFTYQGEAFGKRLEPLAASVGSDFMVDADVTDDA
SLDTAFEQLAARWPTLDFLVHAIAYSDKSELTGRFLNTTRANFKHSMDISAYSLIEVARRAYPMMKENGG
TVLTLTYQGSNRVVPNYNVMGVAKAALESATRYLANDLGPDGIRVNAISPGPMKTLAGAAIGGARKTFKF
CDQNAPLRSNATLEAVGGTAVYLASDAGACTTGEIIRVDGGFHVLGMPQSEFM
>gi|56709221|ref|YP_165267.1| 3-oxoacyl-(acyl-carrier-protein) synthase [Ruegeria pomeroyi DSS-3]
MRRVVVTGLGIVSSIGVNAEEVTASLRAGRSGIVACEEMAEHGFRSRIAGTLKIDVAEHVDKRALRFMGP
GAAYAHIAMQQAIADAGLSEEQVVNPRTGLVAGSGGPSTSAMLSAHQTVLKTGATKRIGPFAVPKCMCST
ISANLATAFKIKGLNYSITSACSTSLHCIGNAAEQIMMGKQDVMFAGGGEELDWTLSCLFDAMGAMSSKY
NDTPEKASRAFDQDRDGFVISGGGGIVVLEELEHALARGAKIYAEVTGYAATSDGHDMVAPSGEGGERAM
RLAVSTLPEDRKISYINAHGTSTPVGDVGEVEAVRRVFGEGRVPPISSTKSMTGHAQGAAGALEAIFCLL
MLEHDFITPSINVETLAEGIQPGEVATQYVENAGLDSVMTNSFGFGGTNGSMVLSKFRG
>gi|56709222|ref|YP_165268.1| hypothetical protein SPOA0441 [Ruegeria pomeroyi DSS-3]
MTVAIPDLRVCANLTGKTLLICVGAAKCATSWLHDYLGSRPEVTVSPLKELHFFDSKFPEHALGDADGLA
LARLSFQLGQAGDAVANLRHRAIFQASLDRAQMIYDDNAYFGHFARLCGPQTRCFCDLTPSYSAIGAEGF
AYMKRFCASQDIEVKILFLMRDPVRRFWSQLRHLQQMNPVNDVASKWRHALTAPALLARADYRGIVLALE
QVFPSANLLCLFYESLFEGDDAIRRLCRFIGIPFAPAATGQRHNETTVRLPLSDDARDAFRHLLAPQYDF
CRERFGRSIPGSWLA
>gi|56709223|ref|YP_165269.1| hypothetical protein SPOA0442 [Ruegeria pomeroyi DSS-3]
MLDSVGRFCYHAATFLNFVTCFGAIEDSRVF
>gi|56709224|ref|YP_165270.1| hypothetical protein SPOA0443 [Ruegeria pomeroyi DSS-3]
MPEDGIGFEFFRDDQNPRLTIVNEAALQNASNQLFNEIAHLRAFDHLGNAVEAVQKAAQHKARQDPPDWD
DNVPPDATDGGDFFLLG
>gi|56709225|ref|YP_165271.1| 3-hydroxydecanoyl-(acyl carrier protein) dehydratase [Ruegeria pomeroyi DSS-3]
MAQYPSSFDKEDLLKCARGELFGPGNAQLPAPPMLMMDRITEVSADGGAHGKGHIRAEFDITPDLWFFDC
HFPGNPIMPGCLGLDGLWQLTGFNLGWRGWLGRGYALGVGEVKLTGMVRPDRKMLTYKVDFTKAIQTRRL
TMGVADGIVEADGEVIYQVKDMKVALSES
>gi|56709226|ref|YP_165272.1| FUR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MTPNSQEIATDWLVDAGLRPTRQRVALAELLVGDGRHRHVTAESLFDAARSKGAAVSLATVYNTLRAFCD
AGVLQEITVDGSKSYFDTNTHDHPHFFWEDEGRLSDAPSDQLVIQRLPEAPEGVEIASVDVVIRLRRKG
>gi|56709227|ref|YP_165273.1| LysR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MLYLTLRQYEYVCAVGRHGSLSAAAAALNVSQPALSAALTKIESHLSQPLFMRRRGSAMAVTPAGRRFIT
AAEALLSDAARIEDPAHPRPARRQLHLGCFTDLAPFLLAPALHALRRALPDVTISTRADGFEALISALLK
GQIDLALTYDLGLDAGFDRQPLYQSHPQAVMAPDHPLAQGTDPDLEALTAHPLILSDEGLSAQHMLGLFR
RRGLAPVVAHRAATLELLRSLAAHGEGVGISYAAPAHPASYDGRPLLSRPIAGADLAESVILARHGTGPA
DRTTARAAQVLTDLFVAR