LOCUS NC_005007 4679 bp DNA circular BCT 30-MAR-2006 DEFINITION Staphylococcus epidermidis ATCC 12228 plasmid pSE-12228-02, complete sequence. ACCESSION NC_005007 VERSION NC_005007.1 GI:32470581 DBLINK Project:279 KEYWORDS . SOURCE Staphylococcus epidermidis ATCC 12228 ORGANISM Staphylococcus epidermidis ATCC 12228 Bacteria; Firmicutes; Bacillales; Staphylococcus. REFERENCE 1 (bases 1 to 4679) AUTHORS Zhang,Y.Q., Ren,S.X., Li,H.L., Wang,Y.X., Fu,G., Yang,J., Qin,Z.Q., Miao,Y.G., Wang,W.Y., Chen,R.S., Shen,Y., Chen,Z., Yuan,Z.H., Zhao,G.P., Qu,D., Danchin,A. and Wen,Y.M. TITLE Genome-based analysis of virulence genes in a non-biofilm-forming Staphylococcus epidermidis strain (ATCC 12228) JOURNAL Mol. Microbiol. 49 (6), 1577-1593 (2003) PUBMED 12950922 REFERENCE 2 (bases 1 to 4679) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (08-JUL-2003) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 4679) AUTHORS Zhang,Y., Ren,S., Li,H., Fu,G., Lu,L., Lu,G., Jia,J., Tu,Y., Qin,Z., Chen,Z. and Wen,Y. TITLE Direct Submission JOURNAL Submitted (05-NOV-2002) Chinese National Human Genome Center at Shanghai, 250 Bi Bo Road, Shanghai 201203, China COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AE015931. COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..4679 /organism="Staphylococcus epidermidis ATCC 12228" /mol_type="genomic DNA" /strain="ATCC 12228" /db_xref="ATCC:12228" /db_xref="taxon:176280" /plasmid="pSE-12228-02" gene 598..909 /locus_tag="SE_p201" /old_locus_tag="p201" /db_xref="GeneID:1463517" CDS 598..909 /locus_tag="SE_p201" /old_locus_tag="p201" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_863250.1" /db_xref="GI:32470582" /db_xref="GeneID:1463517" /translation="MKLKKVIVTVMFLLVIIFSLNIIIRFQYTESKVRSYLVNIEKKP KKIELKKRIGNLPGYRNYLIEYKEKDTTKYYYYDYKAKQVKGEEQIINGYSKDLKTKS Q" gene complement(930..1481) /locus_tag="SE_p202" /old_locus_tag="p202" /db_xref="GeneID:1463518" CDS complement(930..1481) /locus_tag="SE_p202" /old_locus_tag="p202" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_863251.1" /db_xref="GI:32470583" /db_xref="GeneID:1463518" /translation="MNRNNIFIKILFITSFAMILAIVSNHNQTFALTYKKGDVLTTRS TSASGLTGHNGIYIGNGKVLDTPRVHHYPRVMSVKKWIKSYPKTKVTRPKNSSLGNKA ANNAVKYFKGKKIPYKVTPNPKNIKKTYCSEIVWYSYYKAGKQYMIPEHGVWLPPSIV APYAFVNKQDVKHNGFKFVDNKW" gene 1769..2689 /locus_tag="SE_p203" /old_locus_tag="p203" /db_xref="GeneID:1463519" CDS 1769..2689 /locus_tag="SE_p203" /old_locus_tag="p203" /codon_start=1 /transl_table=11 /product="replication initiator protein" /protein_id="NP_863252.1" /db_xref="GI:32470584" /db_xref="GeneID:1463519" /translation="MSKKNHSNHLRNKDLDNFSKTGYSNSRLNRHTMYTPEPKLSFDA MTIVGNLNKNNAHKLSEFMSIEPQIRLWDILQTKFKAKALQEKVYIEYDKVKADTWDR RNMRVEFNPNKLTHEEMLWLKQNVIDYMEDDGFTRLDLAFDFEDDLSDYYAMTDKSVK KTIFYGRNGKPETKYFGVRDSDRFIRIYNKKQERRDNANIEVVSEHLWRVEIELKRGM VDYWNDCFGDLHILQPDWKTIERTSDRSMVFMLLNDEEEWGKLERRTKNKYKQLIKEI SPVDLTELMKLTLKANEKQLQKQIDFWLIK" gene 2705..2926 /locus_tag="SE_p204" /old_locus_tag="p204" /db_xref="GeneID:1463520" CDS 2705..2926 /locus_tag="SE_p204" /old_locus_tag="p204" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_863253.1" /db_xref="GI:32470585" /db_xref="GeneID:1463520" /translation="MSDMFEVDREIKNTYLKMSIGKNTCPKCNSIFEVSVFNDDFPNR ENELVSCPYCSSLVGYVRTSGTVRSYKIN" gene 3197..3580 /locus_tag="SE_p205" /old_locus_tag="p205" /db_xref="GeneID:1463521" CDS 3197..3580 /locus_tag="SE_p205" /old_locus_tag="p205" /codon_start=1 /transl_table=11 /product="mobilization protein" /protein_id="NP_863254.1" /db_xref="GI:32470586" /db_xref="GeneID:1463521" /translation="MSEQNTFVASDETVGRNRKPNRKEPKQISFRVSESEYLKLRQSA ETLNMSVPAFVKKKAQGSRLVAPKFDKETRQSIARDLSKLGANANQIAKYCNKHQHEA PNYIALEHNINELRERLDEIWQQLN" gene 3562..4413 /locus_tag="SE_p206" /old_locus_tag="p206" /db_xref="GeneID:1463522" CDS 3562..4413 /locus_tag="SE_p206" /old_locus_tag="p206" /codon_start=1 /transl_table=11 /product="RLX protein" /protein_id="NP_863255.1" /db_xref="GI:32470587" /db_xref="GeneID:1463522" /translation="MATTKLGNTKSASRAINYAEKRAEEKSGLNCDIDYAKSSFKQTR ALYGKENGVQAHTVIQSFKPGEVTPEQCNQLGLELAEKIAPNHQVAVYTHADTNHVHN HIVINSIDLETGKKYQSNKKQREFVKQKNDEVCREHGLSVTERNATMRYTQAEKGLIE KDKSSWKDEIRDAIEQSQATNFEELERELNQLDITIDRVTNKTITYRHLKENKKVRGK NLGEQFDKGALENEFAVANERREFEQQLSEYEPRESEYRPRDTEKNIKRPKELRVQSR ENDFELE" ORIGIN 1 cagcgttgat gttgacacta tttgccgttt tattgattag cgttgtcgct acattcatgg 61 gtggtttatt caatgtttta ggatttgacc acatgtataa aggtctagaa tatcaaataa 121 agcactcaga aggttttgta gcatttttat ggcatttagg atacttgata ccttatttac 181 tattagcgac gctgatatgg cttatattgg ctttagaaca caaatataga tattaacacg 241 catttatgcc gagaaaattt attgatgttg agaagaaccc ttaactaaac tgtagcgacg 301 aatgtcggca tagcgtgagc tattaggccg acgagtcgac agttttgggg tttgttaagg 361 gttcagaggc tcaacgtcaa taaagcaatt ggaataaagc aaaaatttat acaatttcaa 421 ataggaggtt ttcatgtgat aaaagagtta tttttaagtg tattgttttt tattgttatt 481 attttgatct taacgttttc agattatata tttttaaatg atatcaatac tttaaaaaat 541 atattggcaa caatggctat aacaatattt attatgtgtg ttatagggag ggattaaatg 601 aaattaaaaa aagtaatagt tactgttatg tttttattag taataatatt ttctttaaat 661 attattataa gatttcagta tacggaaagt aaggttcgct catatttggt taacattgag 721 aaaaaaccta aaaaaattga attaaaaaaa agaattggga atttaccagg atataggaat 781 tatttaatag aatataaaga aaaagatact acgaagtact actattatga ctataaagca 841 aagcaagtga agggagaaga gcaaataata aatggttatt ctaaagattt aaagactaaa 901 tctcaataga tttagtcttt attttgtaac taccatttat tatctacgaa tttaaaacca 961 ttgtgcttaa catcttgttt attaacaaat gcatatgggg ctacaatact tggtggtaac 1021 caaactccat gctcggggat catatattgt tttccagctt tgtaatagga ataccatact 1081 atttcgctgc aataggtttt tttgatattt ttaggatttg gtgtaacctt atatggtatt 1141 tttttgcctt taaaatattt aacggcgttg tttgcagctt tatttcctag actagaattt 1201 tttggtcgtg ttacttttgt tttaggatag cttttaatcc attttttcac tgacattact 1261 cttggataat ggtgaactct aggagtgtct agaacttttc cattacctat gtatataccg 1321 ttatgtcctg taagaccact tgcactagta cttctagttg ttaagacatc acctttttta 1381 taagtaagag caaaagtttg attgtggtta ctaacaattg caagaatcat agcaaatgat 1441 gtgataaata aaatttttat gaatatatta tttctattca tatatttcac ctccgtaaat 1501 tatattacat tttttatata aaaataaaaa gacgtattct taatagacct agatttttta 1561 tagtgttata ttaatagcaa aataaaaaag aagtcgtcca ccccaaaccg accaaagttt 1621 acgtgaacga ctagccaaaa tataaaacag tcgatgtttt tatgtttttg tatattttga 1681 tattaaacga tatttgatta tacttcaaca tttacatttg acgtttgggt ggacgacttc 1741 ttaaaacaaa ttaaggagtc gattttttat gagtaagaaa aatcattcaa atcacttacg 1801 aaataaggat ttagataatt tttctaaaac cggctactct aatagccggt taaaccgaca 1861 tactatgtac acacccgaac caaaattaag ctttgacgct atgactattg ttggaaatct 1921 taataaaaat aatgctcaca aactatctga atttatgagt attgagccac aaatacgact 1981 ttgggatata cttcaaacta aatttaaagc taaggcgcta caagaaaaag tttatattga 2041 atatgacaaa gtaaaagcag atacgtggga tagacgtaat atgcgtgttg aatttaatcc 2101 aaataaactt acgcatgaag aaatgctttg gttaaaacaa aacgttatcg actacatgga 2161 agatgacggt tttacaagat tagatttagc ttttgatttt gaagatgatt taagtgatta 2221 ttatgcaatg actgataaat cagttaagaa aactattttc tatggtcgta atggtaaacc 2281 agaaacaaaa tattttggtg ttcgtgacag tgataggttt attagaattt ataataaaaa 2341 acaggaacgt agggataatg caaatattga agttgtttca gaacatctat ggcgtgtaga 2401 aattgaatta aaaagaggta tggttgatta ttggaacgat tgttttggtg atttacatat 2461 attacaacca gattggaaaa ctatcgaacg tacttctgat agatcaatgg tttttatgtt 2521 gttgaatgac gaagaagaat ggggaaaatt agaaagacgt actaagaata aatataagca 2581 attaattaaa gaaatatctc cagttgattt aacggaatta atgaaattga ctttaaaagc 2641 gaatgaaaaa caattgcaaa agcagattga tttttggtta attaaataaa aaaggagttt 2701 taatatgtca gatatgtttg aagtagatag agaaattaaa aatacttatt tgaaaatgag 2761 tattggaaaa aatacttgtc cgaaatgtaa tagcattttt gaagtttcag tttttaatga 2821 tgattttccg aatagagaga atgaattagt atcttgtcca tattgttcta gtttagttgg 2881 ttacgttaga acaagtggaa ctgttagatc ttataaaatt aattaagctt ttaaggatat 2941 atagcaacca ccatttttgg ttgctggggg tttaatggtc ttgaacttag tggctagcaa 3001 ttagccacta tttttgtgta aacaaaaata caaaaggggt atggggatat tccccatcaa 3061 gccggtatat tcagaacgaa gtggctagaa tatacgacgc ttgccaaacc actaaatgac 3121 ttgataaaat ctggcttacc ctgtaagcta gatttatatt aagtcattac tttcgaagaa 3181 agcgtggtgg gattaaatga gcgaacaaaa cacatttgtg gctagcgacg aaactgttgg 3241 gcgaaaccgt aaacccaacc gtaaggagcc aaaacaaatt agttttcgtg tgagcgaatc 3301 cgaatattta aagttaaggc aatctgcgga aactttaaat atgagtgtgc ctgctttcgt 3361 aaagaaaaag gcacaaggca gtcgattagt cgcaccaaaa tttgataaag aaacgcgaca 3421 atcgattgct agagatttaa gtaagttagg tgcaaacgcc aatcagattg ctaaatattg 3481 taataaacat caacatgaag cacccaatta catagcgtta gaacataata tcaatgagtt 3541 acgtgaaagg cttgatgaga tatggcaaca actaaattag gtaataccaa atcagcaagt 3601 cgagcaatca attacgcaga aaagcgagca gaagaaaaaa gtggcttaaa ttgtgatata 3661 gattatgcaa aatcatcgtt taagcaaaca cgagctttat atggcaaaga gaatggtgtt 3721 caagcacata cagtgattca atcgttcaag cctggcgagg taacgccaga gcaatgtaat 3781 caattgggtc tagaattggc agaaaagatt gcacctaatc atcaagtagc cgtctatacg 3841 cacgcagata caaatcatgt acacaatcat attgtgatta attcaattga tttagaaact 3901 gggaaaaaat atcaaagcaa taaaaaacaa agagagttcg taaaacaaaa aaatgatgaa 3961 gtatgtagag aacatggatt gtctgtaact gaacgcaatg caacaatgcg atatactcaa 4021 gccgaaaaag gcttaattga aaaagataaa agctcttgga aagacgaaat tagagatgcg 4081 attgaacaat cacaagcgac aaattttgag gagcttgaga gagagttgaa ccaattagac 4141 atcacaatcg atcgtgtcac aaacaaaaca atcacttaca gacacttgaa agaaaataaa 4201 aaagtgagag gtaaaaattt aggtgaacaa ttcgataagg gggcattaga aaatgagttt 4261 gcggtcgcaa atgaacggag agaattcgag caacaattat cagaatacga accgagagaa 4321 agtgagtaca gaccaagaga tacagaaaaa aatattaaac gtcctaaaga acttagagtc 4381 caatcacgag aaaacgactt tgaacttgag tgatgaagac aagctatata tatcacgaat 4441 gaccgatcag ataaaacgct cgaatacgca tgagattaaa gtaaatattg agacagatga 4501 taatctaagc gaatttatta aacaaaaaat cgatgagaaa tttgatgaaa aaatacctaa 4561 tcttcgtaca aagcaaacaa tggaacaatt caaatggtct ttgatgagaa ttgaggataa 4621 acaagaaata ctcgatgaca atattgaaag tgttcacaaa tgggcgactt actttaagt //