LOCUS NC_004943 3626 bp DNA circular BCT 20-JUL-2008 DEFINITION Bifidobacterium longum NCC2705 plasmid pBLO1, complete sequence. ACCESSION NC_004943 VERSION NC_004943.1 GI:32456045 DBLINK Project:328 KEYWORDS . SOURCE Bifidobacterium longum NCC2705 ORGANISM Bifidobacterium longum NCC2705 Bacteria; Actinobacteria; Actinobacteridae; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium. REFERENCE 1 (bases 1 to 3626) AUTHORS Schell,M.A., Karmirantzou,M., Snel,B., Vilanova,D., Berger,B., Pessi,G., Zwahlen,M.C., Desiere,F., Bork,P., Delley,M., Pridmore,R.D. and Arigoni,F. TITLE The genome sequence of Bifidobacterium longum reflects its adaptation to the human gastrointestinal tract JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (22), 14422-14427 (2002) PUBMED 12381787 REMARK Erratum:[Proc Natl Acad Sci U S A. 2005 Jun 28;102(26):9430] REFERENCE 2 (bases 1 to 3626) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (07-JUL-2003) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 3626) AUTHORS Schell,M.A., Karmirantzou,M., Snel,B., Berger,B., Vilanova,D., Pessi,G., Bork,P. and Arigoni,F. TITLE Direct Submission JOURNAL Submitted (26-AUG-2002) Bioscience, Nestle Research Center, P.O. Box 44, Lausanne 26 1000, Switzerland COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AF540971. COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..3626 /organism="Bifidobacterium longum NCC2705" /mol_type="genomic DNA" /strain="NCC2705" /db_xref="taxon:206672" /plasmid="pBLO1" repeat_region order(663..681,685..703,707..725,729..747) /note="19-bp tandem repeat region" /rpt_type=tandem gene 797..1690 /gene="rep" /locus_tag="pBLO1_01" /db_xref="GeneID:1789106" CDS 797..1690 /gene="rep" /locus_tag="pBLO1_01" /codon_start=1 /transl_table=11 /product="replication protein Rep" /protein_id="NP_862282.1" /db_xref="GI:32456046" /db_xref="GeneID:1789106" /translation="MSNEIVKFSNQFNNVALKKFDAVHLDVLMAIASRVRERGTATVE FSFEELRGLMRLKQNLTNKQLADKIVQTNARLLALNYMFEDSGKIIQFALFTVFETDP ANQTLEVSVNERFAFLLNDLTSQFTRFELAEFADLKSKYAKEFYRRAKQYRSSGIWKV SRDEFCRLLNVSKSTSDSVSNLNRVVLKPIVEECGPLLGLKIERQYAKRRLSGFVFTF ARETPPVIDARPVKAKEEQDSGHWTSVAGYGEVFTTTELFDVTAARDHFDGTVDAGEC RYCRYDARNRERHARNAGTLF" gene complement(1687..3384) /gene="mobA" /locus_tag="pBLO1_02" /db_xref="GeneID:1789105" CDS complement(1687..3384) /gene="mobA" /locus_tag="pBLO1_02" /codon_start=1 /transl_table=11 /product="mobilization protein MobA" /protein_id="NP_862283.1" /db_xref="GI:32456047" /db_xref="GeneID:1789105" /translation="MAIYHLSVSNVSRASGSRATATLSYITGKRVHDERRGETYDYGR KERVLRVGTLLPEGAPAEFADPAVLFNAVELHETGRTARPAKKIVVALPREFTPRQRV QALEGYIRENLNADGYAATYAIHDDGQGNNPHAHILVANRQIDPKTGGWAKLKQRMEY VLDERGERVPLIDPKTGAQKLDKRGRRQWKRTSVSLNPLDRKAKLQSLRESWAKTCNA RLDETARIDHRSLEDQGSDLEPTIHEGYAARAIERAGGVSERCQTNREIRRSNDLLTA IRHELGRIFDRLGELFAAKIGQLRQRQARPEAAREPNWRYFEGDARRQLEADRADHAA ALRGRLMDARADVRNRETWWKNHGTEEFEAAKQIIDVACEASREARDAGMFQRGRLRR NAEQVAGEQSERLRGAVPWLEDTEIPADWDQANRFRMRTTKAIHDHDMQPRTGLVAEL ERQLEQAEQAAGERPSPEQVKDLALRMAEQRERAEGQARGANRPEPSGDEPLDLSEPE DWGESSPFEQRATPKTKADLLGELKQRADRRTGRQEAEQRQIDPWSAQPPQRRGHGR" ORIGIN 1 atatcaccat acggatgatg cagaccatgt aaggagccgt ttcgatggtg aagagcctgg 61 atgagcagat caagtccctg caggagaggc aggcccagct caaggcccgc gaggacgacc 121 tcaaggcgcg gcgcagggaa cgcgaacgca aggcccgaac caagcgcctg atcgaggtcg 181 gcgcgatggc cgagtcggcc gccggcttcg agggaggcga cgagagggcc aaggaacaca 241 tcgcccgcct cgtgcagctc ggctccctgg tggaagccat gtgctccacc gacgtgatgg 301 gcaactacac gagccgcgag gacctcaggg ccaccgtcgc caaggccctg gaacacaacg 361 tcaggaccag cgacggcatg aactggaacc tgcacgacct ggtgtacgag gcgctgagcg 421 aggaatgggc caggagggac ggcgagatcg gcgacccctg ggcggacgaa ccagccagcg 481 gataccagcc gccctcatac gagcccgtca accccgaacg caggactccc caaacgccct 541 ccgacggcct gatctgacgt ccggaaaaag gcgctttgcg cccttttata atcttttaaa 601 atctttttac attcttttag gggtcccgca gccctactct cccaacgagt ttcggacgga 661 actgagtaca aaataggagc gaattgagta caaaatagga gcggactgag tacaaaatag 721 gagcgaattg agtacaaaat aggagcggac tgagtaagta agtaattttt atactcagtt 781 gtgctatgct gtggttatgt ccaatgaaat cgtgaagttc agcaaccagt tcaacaacgt 841 cgccttgaag aagttcgacg cggtgcacct ggacgtgctc atggcaatcg cctcgagggt 901 gagggagagg ggcacggcca cggtggagtt ctcgttcgag gagctgcgcg gcctcatgcg 961 gctgaagcag aacctgacca acaagcagct ggccgacaag atcgtgcaga cgaacgcccg 1021 cctgctggca ttgaactaca tgttcgagga ctcgggcaag atcatccagt tcgcgctgtt 1081 cacggtgttc gagaccgacc cggcgaacca gacgcttgag gtgagcgtga acgagcgatt 1141 cgcgttcctg ctcaacgacc tgaccagcca gttcacgcga ttcgagctgg ccgagttcgc 1201 cgacctcaag agcaagtacg ccaaggagtt ctaccgcagg gccaagcagt accgcagctc 1261 gggaatctgg aaagtcagcc gcgacgagtt ctgccgactg ctcaacgtgt ccaagtccac 1321 gtctgactcg gtctcaaacc tgaacagagt cgtgctgaag ccgattgtcg aagagtgtgg 1381 cccgctcctt ggcttgaaga tcgagcgcca gtacgcgaag cgtcggctgt cgggcttcgt 1441 gttcacgttc gcccgtgaaa ccccgcctgt gatcgatgcc aggccggtga aggccaagga 1501 agagcaagat tccggccatt ggacgagtgt ggcgggctat ggcgaggtgt tcacgaccac 1561 tgagctgttc gacgtgacgg cggcgcgtga ccacttcgac ggcaccgtgg acgcgggcga 1621 atgccggtac tgccggtatg acgctcgcaa ccgcgagcgg cacgccagga acgcggggac 1681 gctgttctag cggccgtggc cgcgcctctg gggcggttgt gcgctccatg ggtcgatctg 1741 ccgctgttcg gcttcctgac ggcctgtgcg cctgtctgcg cgctgtttga gttccccgag 1801 caggtcggcc ttggtcttgg gggtggcgcg ctgctcgaac gggctggatt ccccccagtc 1861 ctcgggttcg ctcagatcca gcggctcgtc gccggacggc tcgggccggt tcgctccccg 1921 cgcctgtccc tcggcccgtt cccgctgttc ggccatgcgc aatgcgaggt ctttcacctg 1981 ttcggggctt ggccgctcgc ctgcggcttg ctcggcctgt tcgagctgcc tctccagttc 2041 ggccacgagg ccggttctcg gctgcatgtc gtggtcgtgg atggccttgg tggtcctcat 2101 gcggaacctg ttggcctggt cccagtcggc gggaatctcg gtgtcctcga gccatggcac 2161 cgccccgcgc agcctctcgg actgctctcc ggccacctgt tcggcgttcc tgcgcagcct 2221 gccgcgctgg aacatgcccg cgtccctggc ctcgcgcgag gcctcgcacg ccacgtcgat 2281 gatctgcttt gcggcctcaa actcctcggt gccgtggttt ttccaccacg tctcgcggtt 2341 cctcacgtcg gccctcgcgt ccatgagcct gccgcgcagc gctgccgcat ggtcggccct 2401 gtcggcttcg agctggcggc gcgcgtcgcc ctcgaaatac cgccagttcg gctccctggc 2461 cgcttccggc cgcgcctggc gttggcgcag ctggccgatc ttggcggcga acagttcgcc 2521 caggcggtcg aatatccggc cgagttcgtg tcggatggcg gtcagcaggt cgttgctgcg 2581 cctgatctca cggttggtct ggcaccgctc gctgacgcct ccggcccgtt cgatggccct 2641 ggcggcgtag ccctcgtgga tggtgggttc gaggtcgctg ccctggtcct cgaggctcct 2701 gtggtcgatt ctcgcggtct cgtccagccg cgcgttacag gtcttcgccc aggattcgcg 2761 cagggactgg agcttggcct tccggtcgag cgggttcagg gacacgctcg tgcgcttcca 2821 ctgcctgcgg ccccgcttgt cgagcttctg cgccccggtc ttcgggtcga tcagcggcac 2881 ccgctcgccc cgctcgtcca gcacgtactc catgcgctgc ttgagtttcg cccagccgcc 2941 cgtcttcggg tcgatctgcc ggttggcgac gaggatgtgc gcgtgcggat tgttgccctg 3001 gccgtcgtcg tggatggcgt aggtggccgc gtagccgtcc gcgttcaggt tctcccggat 3061 gtagccctcc agggcctgca cgcgctgcct gggggtgaac tcgcgcggca gggccaccac 3121 gatcttcttg gccggcctcg ccgtccgtcc ggtctcgtgc agctcgaccg cgttgaacag 3181 cacggcgggg tcggcgaact cggccggggc cccctccggc agcagggtgc cgacgcgcag 3241 cacgcgctcc ttgcgcccgt agtcgtaggt ctcgccgcgc cgctcgtcat gcacccgctt 3301 gccggtgatg tacgagagcg tggccgtggc cctggaaccg ctcgcgcggc tcacgttgga 3361 gacggacaga tggtagatcg ccatcggctt cggctccttt cgtgatcggc cagggcggcg 3421 gggtgcgggg cggcggccct gcggcaaggg gttcccaggg gtgcggcgag cacccgctgg 3481 gcctgccggg aggctccccc ggaagggtgg gaatccaaag ggcaaggccc gtggcccccg 3541 gagggcgcgc ttacggaaaa tgcaacctcc ggttgcatgt aagtgcgccc taatctttga 3601 ttagggattt ccttgctggt agaatc //