LOCUS NC_004925 5247 bp DNA circular BCT 19-JUN-2009 DEFINITION Aeromonas salmonicida salmonicida A449 plasmid pAsa2, complete sequence. ACCESSION NC_004925 VERSION NC_004925.1 GI:32453780 DBLINK Project:16723 KEYWORDS . SOURCE Aeromonas salmonicida subsp. salmonicida A449 ORGANISM Aeromonas salmonicida subsp. salmonicida A449 Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas. REFERENCE 1 (bases 1 to 5247) AUTHORS Boyd,J., Williams,J., Curtis,B., Kozera,C., Singh,R. and Reith,M. TITLE Three small, cryptic plasmids from Aeromonas salmonicida subsp. salmonicida A449 JOURNAL Plasmid 50 (2), 131-144 (2003) PUBMED 12932739 REFERENCE 2 (bases 1 to 5247) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (07-JUL-2003) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 5247) AUTHORS Boyd,J.M., Williams,J., Curtis,B., Kozera,C., Singh,R. and Reith,M. TITLE Direct Submission JOURNAL Submitted (19-MAY-2003) Institute for Marine Biosciences National Research Council of Canada, 1411 Oxford St., Halifax, NS B3H 3Z1, Canada COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AY301064. COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..5247 /organism="Aeromonas salmonicida subsp. salmonicida A449" /mol_type="genomic DNA" /strain="A449" /sub_species="salmonicida" /db_xref="taxon:382245" /plasmid="pAsa2" gene 476..1183 /locus_tag="ASA_pAsa201" /old_locus_tag="pAsa2_01" /db_xref="GeneID:3722530" CDS 476..1183 /locus_tag="ASA_pAsa201" /old_locus_tag="pAsa2_01" /note="Orf2" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_861569.1" /db_xref="GI:32453781" /db_xref="GeneID:3722530" /translation="MEGSKEEVVAQLRDDLNSLHEKNKVPVLVREIIEQKRWQGSPQK TAVHYGCPTREEDMGRYNDASGRTGVCYTADFAVTACAESYGRLYHKSDTKFHIGSDD LDKAHICTVRTTRETNTIDMGKLQACLHLTSDKLTGDDKTITREIVNWAANLPCSPYD GVTYRSRHHGGNGTCTAFWNVGGRGDPLETVNMVAVSNYKDRNLECFPQGWEEDDIDG EEILTETLHFEITPNNP" gene complement(1218..1874) /locus_tag="ASA_pAsa202" /old_locus_tag="pAsa2_02" /db_xref="GeneID:3722531" CDS complement(1218..1874) /locus_tag="ASA_pAsa202" /old_locus_tag="pAsa2_02" /note="Orf3" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_861570.1" /db_xref="GI:32453782" /db_xref="GeneID:3722531" /translation="MNRWKDSVMKTQTVQHAAPMAKERATLSHILSKRVEGLIGSVLP EIEQGAPIHTALELTDNDLMKLIVASFISKNSRVSPREMNKIKRRIEGTFSFYDLLKS LGGTIRVNEVASLLNVTRQTVHNYIKRNELLAVKPGNEFLFPIFQFDNDGISSEFQKI LKLLPDDISPVTKISFFTSTVVEKENKSIIDILKTNNITSNTLSIIRNRARVFGRQMG" gene 1998..2537 /locus_tag="ASA_pAsa2s1" /old_locus_tag="pAsa2_s1" /db_xref="GeneID:3722529" misc_RNA 1998..2537 /locus_tag="ASA_pAsa2s1" /old_locus_tag="pAsa2_s1" /product="RNAII" /note="replication primer; oriV region" /db_xref="GeneID:3722529" gene complement(1998..2110) /locus_tag="ASA_pAsa2s2" /old_locus_tag="pAsa2_s2" /db_xref="GeneID:3722528" misc_RNA complement(1998..2110) /locus_tag="ASA_pAsa2s2" /old_locus_tag="pAsa2_s2" /product="RNAI" /note="antisense RNA; regulator of RNAII" /db_xref="GeneID:3722528" rep_origin 2518 /locus_tag="ASA_pAsa2s1" /old_locus_tag="pAsa2_s1" /note="DNA replication origin" oriT 2790..2808 /note="origin of transfer" gene 2977..3282 /locus_tag="ASA_pAsa203" /old_locus_tag="pAsa2_03" /db_xref="GeneID:3722532" CDS 2977..3282 /locus_tag="ASA_pAsa203" /old_locus_tag="pAsa2_03" /note="Orf1" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_861571.1" /db_xref="GI:32453783" /db_xref="GeneID:3722532" /translation="MKDERDDQTLDLLPSGKRRGLPPTGKALSAAAKQAAYRARQREK TVTVTLNRLDCGELEIFLRNLRDGRTSTLAPEVVARLHEAVRSAWRGQLHSGNGDQK" gene 3303..3620 /gene="mobC" /locus_tag="ASA_pAsa204" /old_locus_tag="pAsa2_04" /db_xref="GeneID:1496850" CDS 3303..3620 /gene="mobC" /locus_tag="ASA_pAsa204" /old_locus_tag="pAsa2_04" /note="MobC" /codon_start=1 /transl_table=11 /product="mobilization protein" /protein_id="NP_861572.1" /db_xref="GI:32453784" /db_xref="GeneID:1496850" /translation="MIKIRVTADELVRLKGLSGDERLAEWMRSKCLGNDKAAGRRRTP VPKADPALLRQIAGIGNNLNQVARRVNSGEWGAVERVQVIAVLMAMERALQAISVPST EVT" gene 3787..5247 /gene="mobA" /locus_tag="ASA_pAsa205" /old_locus_tag="pAsa2_05" /db_xref="GeneID:1496851" CDS 3787..5247 /gene="mobA" /locus_tag="ASA_pAsa205" /old_locus_tag="pAsa2_05" /note="MobA" /codon_start=1 /transl_table=11 /product="mobilization relaxase" /protein_id="NP_861573.1" /db_xref="GI:32453785" /db_xref="GeneID:1496851" /translation="MIVKFHARGVGRGSGPVDYLLGPQRDREGATLDRGDPGLIEALI DSSPYAKKYTSGVLSFQEADLPREDKDKLMDSFERALLPGLDRDQYACLWVEHRDKER LELNFVIPNIELLSGKRLQPYFDRADRPRIDAWKVVVNAQLGLHDPDDPLNKRALMTP SNLPKAKQDAAQAITDGLLSLAAAGELADRGDVVATLKQHGFEVVRETRKSISIADPE GGRNIRLKGALYEQDFRAGQDLRKELEAAGERYRNEREERVRAARESYSRGVGLKRAE IERRYRRPEPEVGLAGVEGVGFSVDRGGISAGDQLGRGVVPGEGHRRELGGDLAPEQD IGAVDGEGRQIGTVNVRRGQAAVREGGLEGVGLWRQRERRISLDDPGGLLNDRARTAV IERVREFGRRVQSAALGLGERLQRFAADVRGHLYREPGIAGERGELEQAGVALERSSR EIEPKIEALSLDREPRCGGMSFGREYREYGDREYGD" gene 4475..4939 /gene="mobB" /locus_tag="ASA_pAsa206" /old_locus_tag="pAsa2_06" /db_xref="GeneID:1496852" CDS 4475..4939 /gene="mobB" /locus_tag="ASA_pAsa206" /old_locus_tag="pAsa2_06" /note="MobB" /codon_start=1 /transl_table=11 /product="mobilization protein" /protein_id="NP_861574.1" /db_xref="GI:32453786" /db_xref="GeneID:1496852" /translation="MSKILELAKTFEKSSKQQASDIETSVKNAFEPHEKAILEALDSS GRRLNAAIDAQSRRWGWLVLKGWVFPLIGVAFLLGISWVVVWYQGRVIAENWVEISRQ NKTLEQLTAKGGKLELSTCGEDKRLCVKVDLKELAYGDKEKDEYPWMIPEGY" gene 4940..5164 /gene="mobD" /locus_tag="ASA_pAsa207" /old_locus_tag="pAsa2_07" /db_xref="GeneID:1496853" CDS 4940..5164 /gene="mobD" /locus_tag="ASA_pAsa207" /old_locus_tag="pAsa2_07" /note="MobD; putative" /codon_start=1 /transl_table=11 /product="mobilization protein" /protein_id="NP_861575.1" /db_xref="GI:32453787" /db_xref="GeneID:1496853" /translation="MTELERQLLNALESLEGGYRVQHSAWESAYSDLRLMFEATSTEN RALRESVGSLSKQVLHLSAQVERLSQKLKP" ORIGIN 1 gtggccctac tcaatcatta gccggtatag ctgttgcgac gtacattttc gttccgttgg 61 acttcatacc ccataacccg taggaataca cttcaaacgc gcttaggcgc gttttttgtt 121 ttcggtatgc cattgccttg ggggtaggga agaaatggct gtaatcgcca caagtaaagc 181 ctgtttttgg agctatttca tagctcgtag ctaaattgtg tttgtttgat taaaaaacta 241 gcaaaccacc ataaattcaa tctaggcgtt tttgtacgat tttggttttc ttatccttat 301 tttcaataag gaaagtttat aggcgttgat tgttgggata caatgtctct gccatgaaaa 361 atatggcaag gaggatgctg gctaaagcta atgcatcttt aaataaacat aagcatacaa 421 aggtgaagct tatgcaatta attataaacc cacactcacg atatcgaggt atcaaatgga 481 aggaagtaag gaagaagttg ttgcacaact acgtgatgat ttgaattctc tacatgagaa 541 aaataaagtt cccgtacttg ttcgtgaaat catagagcaa aagcgttggc agggaagtcc 601 gcaaaaaacg gcagtccatt atgggtgccc tacgcgtgag gaagatatgg ggcgttataa 661 tgatgcttct ggtcgaactg gcgtttgtta taccgcggat tttgcagtaa ctgcgtgcgc 721 tgagtcatat ggtcgccttt accataagtc agataccaag tttcacattg gtagtgatga 781 tctggataag gctcacattt gcacggtcag gactacgcgt gaaacgaaca ccattgatat 841 gggaaaactg caggcttgcc tgcatttgac tagtgataaa ttgactggtg atgacaaaac 901 catcaccagg gagattgtca actgggctgc gaatcttccc tgttcgcctt acgacggagt 961 tacataccgt tcaaggcatc atggtggtaa cgggacgtgc acagccttct ggaatgttgg 1021 tggaagggga gaccctttgg aaactgtcaa tatggttgct gtaagcaact ataaagatcg 1081 gaatctagag tgttttcctc aagggtggga agaggatgat atcgatggtg aggaaatctt 1141 aacagaaacc cttcacttcg aaatcacccc taacaaccca taataaagat ggtgtcgcca 1201 gttaatggcg acacttctta ccccatctgg cgcccaaaaa ctcgcgctct atttcttata 1261 atacttaaag tattgctagt tatattattt gtttttaaaa tgtcaattat tgatttgttt 1321 tctttttcta caacagtgga tgtgaaaaat gaaatcttag tcactgggct gatatcatca 1381 ggaagtaact taagtatttt ctggaactca cttgagatcc catcgttgtc aaattgaaat 1441 attgggaata aaaactcatt acctggttta acggctaaca gttcatttct ttttatatag 1501 ttgtgcacag tttgtctcgt aacatttaat agcgatgcta cttcattcac cctgattgtg 1561 ccacctaagg attttagcaa atcataaaaa gagaaagtcc cttctattct tcgctttatt 1621 ttgttcattt cccgagggct gactcgtgaa tttttagata tgaaacttgc tacgatcagt 1681 ttcatcagat cattatcggt taactctagg gccgtatgaa taggggctcc ctgttcaatt 1741 tcaggaagaa cagagcctat taggccttcg actcttttgc taagaatatg gcttagggtt 1801 gcacgctctt ttgccattgg ggcagcatgt tgcacagttt gagttttcat cacactatcc 1861 ttccacctat tcatttacgt ttatgttacg ccggtatgtg taaaacgtca atcttggtgc 1921 aaggatgcat tattgggttt ggttacggtt caaatgatct tgatcagatc gtctgatcaa 1981 gcgtaacctt ctaagcagaa aacaaaaaac ccgcctttag gcgggttctt tgcccggtgt 2041 tctaaggcgt aggaaccttg gaatccggtg ggtaacagct tcgagcagga agcggatacc 2101 gttaagtacc cccccagttt agccgcgtgc ggcccactgt tcaagtatca aacccctgct 2161 cgaaccctgt taccaaaggc tttcaccttt ggcgctttgt cgtattcgct cggattggac 2221 gcaagtgatt gttgccgtag cgggtgtgaa ggtcgggcag aacggggaaa tctcacatac 2281 tgcccaagcg tgcaatcgcg caccacagcc tcccagggct cgcaaccctg gggcatctgc 2341 aagtagagcg taacggggca ccaaccacgg ccagctctta aaaaacggcg cggcagcccg 2401 accaacaggc gggggctaaa gcagagtgca gcgggacggg gtgtgttctc tggagcgcgt 2461 gagagggagc tgccgcaagc agtctcgata gtccggagca aggcgagctt atcctgtaaa 2521 agaccctaaa tcgatgtggg tctgtaggag ggctctccta tcttgaagcg cagcgaaaga 2581 taggagagcc cggcaaactg cggcggcttg ccaacatcct tttcgtccgt ttttttgctt 2641 ccttagggca cgcatcatca cctcccttga tctctttttg cttcctacct gctacctatc 2701 ctcgaagccc tccaattaca gtcactgtta ctctaaatag tctcactaac aggtggttac 2761 aacctattcc gcctatgtca aacttgactc taagccagca tacacagagt gcccttagcc 2821 gcttcgcgtc ttcggttcct ctgtgaagct ggttcagggg cgtgccgccc ccggaccccc 2881 ctgcctccac cgccccgaaa aaccccgttc cgggctttcc caggtcggcg gacagaagag 2941 gtctatggtc acagttaccg taattgaggt gatcggatga aggacgaacg agacgaccag 3001 accctggact tgctgccaag tggcaagcgc cgaggtctgc cacctaccgg caaggcgttg 3061 agcgccgccg ccaagcaagc tgcttaccgg gcacggcaac gggaaaaaac ggtcaccgtt 3121 accttaaatc gtctggattg tggcgagctg gagattttcc tgcggaacct acgggatggc 3181 cgcacctcga ctctggcccc tgaggtggtg gccaggttgc atgaggctgt gcggtcggca 3241 tggcgggggc agcttcattc cggtaacggt gaccaaaaat gaccccgacc aaacgcgaac 3301 gggtgatcaa gatccgggtc accgctgacg aactggtccg cctaaagggc ttgagtggtg 3361 atgaacggtt ggccgaatgg atgcggagca agtgccttgg gaacgacaaa gcagccggtc 3421 ggcggcgaac gccggtaccc aaagccgatc cggctctgct gaggcagata gccgggatcg 3481 gcaacaacct caaccaggta gcgcggcgag tgaatagcgg ggagtggggc gcggttgagc 3541 gtgttcaggt gatcgcggtg ctgatggcga tggagcgtgc tttgcaggcc atctctgtac 3601 cctcaacgga ggtaacgtga tgaacgaata cagcgtagcc gagtatgact acaccctgat 3661 ccggttgccc tgcgaacagg gggggagctt gcggttgttg aaggatggcc aggaggtcag 3721 tggggaggtt taccaggagc acgatgaggc gctcagtgtg gccaccgtct ggctgtgcag 3781 cgagtcatga tcgtcaaatt tcatgcccgt ggcgtagggc gcggtagcgg cccggtcgat 3841 tacctgctgg ggccgcagcg ggatcgggag ggggcgaccc ttgaccgcgg cgatccgggt 3901 ctcatcgagg cgttgatcga cagtagcccc tacgccaaaa agtacacatc cggcgtgctg 3961 tcgttccagg aagcggactt gccccgggag gacaaggaca agctgatgga cagcttcgag 4021 cgtgcgttgt tgccagggtt ggatcgggat cagtacgcct gcctgtgggt ggagcaccgg 4081 gacaaagagc ggcttgagct caacttcgtg atcccgaata tcgagctgct gagtggcaag 4141 cggctgcaac cctatttcga ccgggccgat cggccccgca tcgatgcgtg gaaggtggtg 4201 gtcaacgccc agttgggatt gcatgacccg gatgatccct tgaacaaacg ggcattgatg 4261 acccccagca atctgccaaa ggccaagcag gacgcggcac aagcgatcac cgacggtctg 4321 ctttcgctgg cggcggccgg tgagcttgcc gaccggggag acgtggtggc cacgttgaag 4381 caacacggct ttgaggtggt gcgggagacc cgcaagagta tcagcattgc cgacccggaa 4441 ggggggcgga atatccggct aaaaggggcc ctgtatgagc aagattttag agctggccaa 4501 gaccttcgaa aagagctcga agcagcaggc gagcgatatc gaaacgagcg tgaagaacgc 4561 gttcgagccg cacgagaaag ctattctcga ggcgttggac tcaagcgggc ggagattgaa 4621 cgccgctatc gacgcccaga gccggaggtg gggctggctg gtgttgaagg ggtgggtttt 4681 tccgttgatc ggggtggcat ttctgctggg gatcagctgg gtcgtggtgt ggtaccaggg 4741 gagggtcatc gccgagaact gggtggagat ctcgcgccag aacaagacat tggagcagtt 4801 gacggcgaag ggcggcaaat tggaactgtc aacgtgcggc gaggacaagc ggctgtgcgt 4861 gaaggtggac ttgaaggagt tggcctatgg cgacaaagag aaagacgaat atccctggat 4921 gatcccggag ggctactaaa tgacagagct cgaacggcag ttattgaacg cgttagagag 4981 tttggaaggc gggtacagag tgcagcactc ggcctgggag agcgcctaca gcgatttgcg 5041 gctgatgttc gaggccacct ctaccgagaa ccgggcattg cgggagagcg tggggagctt 5101 gagcaagcag gtgttgcact tgagcgctca agtcgagaga ttgagccaaa aattgaagcc 5161 ctgagcctgg atcgggagcc gcggtgtggt ggaatgagct tcgggcggga gtatcgagag 5221 tatggtgatc gggagtacgg tgattga //