>gi|31983709|ref|NP_858134.1| IS2 ORF2 [Shigella flexneri 2a str. 301]
MVHATELMKHASSPGCWDFVEPKNTAVRSPESNRIAKSFVKTIKCDYISIMPKPDGLTAAKNLAEAFEHY
NEWHPHSALDYRSPREYLRQRANDNRCLEI
>gi|31983710|ref|NP_858135.1| putative resolvase [Shigella flexneri 2a str. 301]
MNHYPSVTSLETPEARCRSGVPPLPACRQRESIYGLIELFIQIVHRLSVRSERRLVKTLLADFQRVHGKT
ALLFRIAEAALNNPDGLVKEVVYHLHIVEPDRSGKRSSSYLAQLRDVSARGDAVKNGRTLPEQDSGLPAL
VSDPGLPRMISTVL
>gi|31983559|ref|NP_858136.1| OspB, protein secreted by the Mxi-Spa secretion machinery, function unknown [Shigella flexneri 2a str. 301]
MNLDGVRPYCRIVNKKNESISDIAFAHIIKRVKNSSCTHPKAALVFLGEKGFCDSNDVLSIMGQQIPRVF
KNKMLYDYVFKNEKSKNDFLKMAESWLPQSEPIVINNDDDALNAAAYFSVKKAKIKTVNDTDFKEYNKVY
ILGHGSPGSHQLGLGSELIDVQTIISRMKDCGILNVKDIRFTSCGSADKVAPKNFNNAPAESLSCILNSL
PFFKEKESLLEQIKKHLENDESLSDGLKISGYHGYGVHYGQELFPYSHYRSTSIPADPEHTVKRSSQKKT
FIINKELD
>gi|31983594|ref|NP_858137.1| PhoN2 (Apy), periplasmic phosphatase, apyrase, ATP diphosphohydrolase [Shigella flexneri 2a str. 301]
MKTKNFLLFCIATNMIFIPSANALKAEGFLTQQTSPDSLSILPPPPAENSVVFQADKAHYEFGRSLRDAN
RVRLASEDAYYENFGLAFSDAYGMDISRENTPILYQLLTQVLQDSHDYAVRNAKEYYKRVRPFVIYKDAT
CTPDKDEKMAITGSYPSGHASFGWAVALILAEINPQRKAEILRRGYEFGESRVICGAHWQSDVEAGRLMG
ASVVAVLHNTPEFTKSLSEAKKEFEELNTPTNELTP
>gi|31983555|ref|NP_858138.1| OspC4 [Shigella flexneri 2a str. 301]
MKNFLRKSIAAQSYSKMFSQGTSFKSLNLSLEAPSGARSSFRSLEHLDKVSRHYISEIIQKVHPLSSDER
HLLSIIINSNFNFRHQSNSNLSNIILNIKSFDKIQSENIQTHKNTYSEDIKEISNHDFVFFGVEISNHQE
KLPLNKTHHTVDFGANAYIIDHDSPYGYMTLTDHFDNAIPPVFYHEHQSFFLDNFKEVVDEVSRYVHGNQ
GKTDVPIFNTKDMRLGIGLHLIDFIRKSKDQGFREFCYNKNIDPVSLDRIINFVFQLEYHIPRMLSTDNF
KKIKLRDISLEDAIKASNYEEINNKVTDKKMAHQALAYSLGNKKADIALYLLSKFNFTKQDVAEMEKMKN
NRYCNLYDVEYLLSKDGANYKVLEYFINNGLVDVNKKFQKANSGDTMLDNAMKSKDSKMIDFFIKKWSGI
RQTI
>gi|56403996|ref|NP_858139.2| putative protein encoded within IS [Shigella flexneri 2a str. 301]
MAETLGEQYDPVLPSSLRQSSARKPLPASLPRAPRVIRPEEECCPACGGELSPLGCDVSEQLELISSAFK
VIEKQRPKLACRRCDHIVQAPVPSKPIARSYAGAGLLAHVVTGKYADHLPLYRQSDLLFHTAI
>gi|31983711|ref|NP_858140.1| IS600 ORF2 [Shigella flexneri 2a str. 301]
MVVSAIASTPHLVYIRTRETYGTRRLQTELADNGIIVGRDRLAGLRKELRLHCKQKRKFRATTNSDHNLP
VTPNLLNQNFTPTAPNQVWVADSVVQAFRNQPTEGAGRETAAYAVR
>gi|31983633|ref|NP_858141.1| IS600 ORF2 [Shigella flexneri 2a str. 301]
MCQVFGVSRSGYYNWVQHEPSDRKQSDERLKLEIKVAHIRTRETYGTRRLQTELAENGIIVGRDRLARLR
KELRLRCKQKRKFRATTNPNHNLPVAPNLLNQTFAPTAPNQVWVADLTYVATQEGWLYLAGIKDVYTCEI
VGYAMGERMTKELTGKALFMALRSQRPPAGLIHHSDRGSQYCAYDYRVIQEQSGLKTSMSRKGNCYDNAP
MESFWGTLKNESLSHYRFNNRDEAISVIREYIEIFYNRQRRHSRLGNISPAAFREKYHQMAA
>gi|56403997|ref|NP_858142.2| hypothetical protein CP0009 [Shigella flexneri 2a str. 301]
MPLNKTFSSSIFSTKNSLSTDMSVNRDNRTITSSIMRVSNSSELIQFKNKTAPYFSEKRNVEVNINGVAK
DIYGRQIVCRHLASYWEMNFMETNGKVNYQLLSTPDAIAKNVCLEKTEDFSKSPAYIYFVENKKWGTVIT
NFFYNMKKNGDFVRTLSACTLNHQMALGLKIKRVQESEKWVVQFFDPNRTVTHKRTVFTCDSHFELSQLS
AKDFFDDFYWKIYGLEQPGQVIFEDRHNSPLTNTVKLLPDELINSRVIYHAITKNLTEVLFILMEKYKNG
EISQSKLVNLLATRSSDGTPAFYIALQNGYSDIIQVYGKILNMCNLSQETILTLLAAVGANNVPGLCMSF
MNGHVDTIKAYGEIVFKTPLTSDKRLYLLAAKDSHDLPGLFFALQNGHADSIRMFGSLLNKKMLSSEQIK
ELLKVKHGLFMALQNGHTKAIMAYGDILKILPPHQEYIDELLWIKNPNGTSGLFMAFYNGHTETIRAFCN
ILKNYSFTTRRLVEMLSATNKDGIPGVFVSVVNRDKETILEYCRIIKENNLEPDTIAEQFSKKMKKTFIE
IINRFNHFL
>gi|31983551|ref|NP_858143.1| OspF [Shigella flexneri 2a str. 301]
MPIKKPCLKLNLDSLNVVRSEIPQMLSANERLKNNFNILYNQIRQYPAYYFKVASNVPTYSDICQSFSVM
YQGFQIVNHSGDVFIHACRENPQSKGDFVGDKFHISIAREQVPLAFQILSGLLFSEDSPIDKWKITDMNR
VSQQSRVGIGAQFTLYVKSDQECSQYSALLLHKIRQFIMCLESNLLRSKIAPGEYPASDVRPEDWKYVSY
RNELRSDRDGSERQEQMLREEPFYRLMIE
>gi|31983712|ref|NP_858144.1| hypothetical protein CP0011 [Shigella flexneri 2a str. 301]
MDDRIQAGKADMAACADEADEPVLGAERTGKGYLEQTMERGKTQRLAEMAAANSDVPMMKNVAKTIGKRL
YGILNAMRHGVSNGNAEALNSKIRLLRIKAKGYRNRERFKLGVMFHYGKLNMAF
>gi|56403998|ref|NP_858145.2| hypothetical protein CP0012 [Shigella flexneri 2a str. 301]
MLNWLSKLRAARIHLPNAVEKIAFDRFHVAKQPGEVVDKTRQNEHPHLPVESRRQAKGTRFLWQHSDKWM
TESRQEKLIWLRAQMKLTSLCWALKELAKDIWSRPWSEERRNDWQRWLRPTVTSP
>gi|31983713|ref|NP_858146.1| putative IS1 ORF [Shigella flexneri 2a str. 301]
MPEPVYRTLLSSTSHVISKKCTQRIERHNLNLRTHLKRLTRKTICFSKSDDMHYKIIGWYLTINHHH
>gi|31983672|ref|NP_858147.1| hypothetical protein CP0014 [Shigella flexneri 2a str. 301]
MKVSFKSLGYIFHDIYNKKHTIDEFNDVVKKAVLSGKINELNACHKVAIFLAEKDNEITKKDKAKIIDTL
TENYSIEFQQLMNISERTLNSSLYITPGESGFVSFVNREGKICHTAYVKSSDNSMTYYHANGSSIDKYIT
DMCGLICMRHIESTGIIFYMLDEKVLSAIAEFMNEKGWRAAFCSAKNLYKCV
>gi|31983614|ref|NP_858148.1| IS91 orf [Shigella flexneri 2a str. 301]
MLPRFADIFQQGNRWLNWLEKQPVQMSRLEHYAGQDEIGLRYNSHRTKREENLVMSGDEFMERFSWHVAD
KGFRMVIRGPESGEAAITGRCGVRHNGDSEKNGEANHKERDVSAVTEG
>gi|56403999|ref|NP_858149.2| putative IS91 ORF2 [Shigella flexneri 2a str. 301]
MDAGNKKLVFWFVRVDDEGYPEIARCMEREFATIPAGINADGMYCPECGTVHWPDGVIPPF
>gi|31983625|ref|NP_858150.1| IS4 orf [Shigella flexneri 2a str. 301]
MPDSFMHIGQALDLGSRYDSLRNPLTSLGDYLDPELISRCLAESGTVTLRKRRLPLEMMVWCIVGMALER
KEPLHQIVNRLDIMLPGNRPFVAPSAVIQARQRLGSEAVRRVFTKTAQLWHNATPHPHWCGLTLLAIDGV
FWRTPDTPENDAAFPRQTHAGNPALYPQVKMVCQMELTSHLLTAAAFGTMKNSENELAEQLIGQTGDNTL
TLMDKGYYSLGLLNGWSLAGEHRHWMIPLRKGAQYEELRKLGKGDHLVKLKTSPQARKKWPGLGNEVTAR
LLTVTRKGKVCHLLTSMTDAMRFPGGEMADLYSHRWEIELGYREIKQTMQLSRLTLRSKKPELVKQELWG
VLLAYNLVRYQMIKMAEHLKGYCPNQLSFSESCGMVMRMLMTLQGASPGRIPELMRDLASMGQLVKLPTR
RGRAFPRVVKERPWKYPTAPKKSQSVA
>gi|31983714|ref|NP_858151.1| putative protein encoded within IS [Shigella flexneri 2a str. 301]
MEQSLQPGACVAQIARENGINDNLLFNWRHQYRKGGLLPSGKNMPALLPVTLTPEPDNKIPAPAQEPEQI
NTPSDSLCCELVLPAGTLRLKGKLTPALLQILIREIKGSSH
>gi|31983613|ref|NP_858152.1| ISSfl4 ORF2 [Shigella flexneri 2a str. 301]
MISFPAGSRIWLVAGITDMRNGFNGLVSKVQNVLKDDPFSGHLFIFRGRRGDQIKVLWADSDGLCLFTRR
LERGRFVWPVTRDGKVHLTPAQLSMLLEGIDWKHPKRTERAGIRI
>gi|31983611|ref|NP_858153.1| ISSfl4 ORF3 [Shigella flexneri 2a str. 301]
MDTSLAHENARLRALLQTQQDTIRQMAKYNRLLSQRVAAYASEINRLKALVAKLQRMQFGKSSEKLRAKT
ERQILEAQERISALQEEMAETLGEQYDPVLPSPLRQSSARKPLPASLPRETRVIRPEEECCPACGGELSS
LGCDVSEQLELISSAFKVIETQRPKLACCRCDHIVQAPVPSKPIARSYAGAGLLAHVVAGKYADYLPLYR
QSEIYRRQGVELSRATLGRWTGAVAELLEPLYDILRQYVLMPGKVHADDIPVPVQEPGSGKTRTARLWVY
VRDDRNAGSEMPPAVWFAYSPDRKGIHPQNHLAGYSGVLQADAYGGYRALYESGRITEAACMAHVRRKIH
DVHARVPTDITTEALQRIGELYAIEAEVRGCSAEQRLAARKARAAPLMQSLYDWIQQQMKIHSLKMECLH
GEHYYPSGNSAGNSV
>gi|31983715|ref|NP_858154.1| putative transposase [Shigella flexneri 2a str. 301]
MDAENETVLNANMTHHLGCEKNQLRSGSNSRNGCLTKIITTGDEPLEIRTLRDRNGTFEPQQLKKNQP
>gi|31983554|ref|NP_858155.1| OspD1, secreted by the Mxi-Spa secretion machinery, function unknown [Shigella flexneri 2a str. 301]
MSINNYGLHPANNKNMHLIIGSNTANENKGMKNNIINVTNTAISHAINEEKSGGGYSGVSFRKLAKIQNI
SIPTKNNKEYNRHNLFSLIWHGNADAARKYGESLLAAEIPKEEKLEVLAARNNAGESALFIALQEGHSAA
IQAYGDFIKTFDLSPKETIKLLDVRDNEGLPGLFLAAGKGNIEAMMAYINICHHSGIKLTEIADRLNNNE
QDMFNIISDKIQELF
>gi|31983660|ref|NP_858156.1| hypothetical protein CP0023 [Shigella flexneri 2a str. 301]
MLQRQRGKVGFAQLPVDFVAIEPDSVQGVGKRANLTNRCFIIRINDSFKKRQGFIEFISNSGSGHTVTVY
TKRRFQRGVFMNSLNTNVVKPVMYRLRSSADARP
>gi|56404000|ref|NP_858157.2| hypothetical protein CP0024 [Shigella flexneri 2a str. 301]
MLGTSFNNFGISLSHKRYFSGKVDEIIRCTMGKRIVKISSTKINTSILSSVSEQIGENITDWKNDEKKVY
VSRVVNQCIDKFCAEHSRKIGDNLRKQIFKQVEKDYRISLDINAAQSSINHLVSGSSYFKKKMDELCEGM
NRSVKNDTTSNVANLISDQFFEKNVQYIDLKKLRGNMSDYITNLESPF
>gi|31983608|ref|NP_858158.1| IS3 ORF2 [Shigella flexneri 2a str. 301]
MSKLILPSNTVSYRAHGLPVSENLLEQDFYASGPNQKWAGDITYLRTDEGWLYLAVVIDLWSRAVIGWSM
SPRLTAQLACDALQMALWRRKRPRNVIVHSDRGSQYCSADYQALLKWHNLRGSMSAKGCCYDNACVESFF
HSLKVECLHGEHFISREIMRATVFNYIECDYNRWRRHSWCGGLSPEQFENQNLA
>gi|31983605|ref|NP_858159.1| IS100 ORF1 [Shigella flexneri 2a str. 301]
MVTFETVMEIKILHKQGMSSRAIARELGLSRNTVKRYLQAKSEPPKYTPRPAVASLLDEYRDYIRQRIAD
AHPYKIPATVIAREIRDQGYRGGMTILRAFIRSLSVPQEQEPAVRFETEPGRQMQVDWGTMRNGRSPLHV
FVAVPGYSRMLYIEFTDNMRYDTLETCHRNAFRFFGGVSREVLYDNMKTVVLQRDAYQTGQHRFHPSLWQ
FGKEMGFSPRLCRPFRLRDPHKITANKPAPYFGRFWTDGLELCSVLFVLK
>gi|56404001|ref|NP_858161.2| ISSfl3 ORF [Shigella flexneri 2a str. 301]
MCQQFNEITAMPVHKVCQNFFRDALAPFHQYRQNALMDATMALINGASLTQTSIGRFLPGNAQVKNKIKR
IDRLMGNEALHRDIPMIFRNITSMLTRQLSLCVIAVDWSGYPSQEHHVLRASLLCDGRSIPLLSKVVPSE
KQNNPLIQHDFLDSLAQSLPPDARVIIVTDAGFQSAWFHHITSLGWDFIGRIRNNVQYCLDNAPERWLKV
SDSPECKTPEYMGAGRLVKERKKSIRGHFYTYKKSAKGRKKKRSKGQSGLNKTDKEQSKSAKEAWLIFSS
TNDFRAREIIKLYSRRMQIEQNFRDEKNGRFGFGLRASKSRSTGRILVLSLLATLSTIVMWLLGYHAENK
GLHLKYQANSIKSRRVISYLTLAKNVLRHSPLILRRTVLSTVLNHLSRTYRNMVLVY
>gi|56404002|ref|NP_858160.2| IS100 ORF1 [Shigella flexneri 2a str. 301]
MISLNCWHKSVDHIMLCLSRFLGIPQPFRAQTKGKVERMVQYTRNSFYIPLMTRLRPMGSTVDVETANRH
GLRWLHDVANQRKHETIQARPCDRWLEEQQSMLALPPEKKEYDVHPGENLVSFDNPPQHHPLSIYDSFCR
GVA
>gi|31983610|ref|NP_858162.1| transposase/IS protein [Shigella flexneri 2a str. 301]
MMMELQHQRLMALAGQLQLESLISAAPALSQQAVDQEWSYMDFLEHLLHEEKLARHQRKQAMYTRMAAFP
AVKTFEEYDFTFATGAPQKQLQSLRSLSFIERNENIVLLGPSGVGKTHLAIAMGYEAVRVGIKVRFTTAA
DLLLQLSTAQRQGRYKTTLQRGVMAPRLLIIDEIGYLPFSQEEAKLFFQVIAKRYEKSAMILTSNLPFGQ
WDQTFAGDAALTSAMLGRILHHSHVVQIKGESYRLRQKRKAGVIAEANPE
>gi|31983684|ref|NP_858163.1| iso-IS1 ORF2 [Shigella flexneri 2a str. 301]
MGRWWRYKWITFHPSLTQHWLWYAYNTKTGGVLAYTFGPRNDETCRELLALLTPFCIGMVTSDDWGSYAR
EVPKEKHLTGKIFTQRIARNNRTLRTRIKRLARKTICFSRSVEIHEKVIGSFIEKHMFY
>gi|31983549|ref|NP_858164.1| plasmid segregation protein [Shigella flexneri 2a str. 301]
MTSFEQLSKVAQRADKMLLALTKQIQEQKQEFQADVFYQVYSKSAVAKLPKLTRASVDGAVGEMEAQGYQ
FEKRPAGTATKYALTIQNIIDIYAHRGIPKYRDRYSEAYSIFIGSLKGGVSKTVSSVSVAHALRAHPHLL
SEDLRILLLDLDPQSSATMFLNYLHAVGLVDTTAPQAMLQNVSREELLEDFIVPSVIPGVYVMPASIDDA
FIASNWDTLCEEHLLGQNKHAILRENIIDKLKHDFDFILIDTGPHLDAFLKNAIAAADIMFTPVPPAQVD
FHSTLKYLARLPELVQIIEQDGCSCRLQANIGFMSKLANKSDHKYCHSLTKEIFGGDMLDVSMPRLDGFE
RSGESFDTVISANPVTYVGSGEALKNARMAAEDFAKAVFDRIEFIRANY
>gi|31983548|ref|NP_858165.1| plasmid segregation protein [Shigella flexneri 2a str. 301]
MENRKHRPTIGRTLNTNILNNTEEISAPVHVFTLNTGRKAKFTEIKVDHDKVDTQTFVVEEVNGREQTAL
TPDSLKDITRTIRLQQFYPCIGIRTGDLIEILDGSRRRAAALLCKVGLRVLVTDDELTVSEAQHLAKDLQ
TSLEHNIREIGLRLVRLKEAGMNQKQIAEREGLSAAKVTRALQAASVPKDFVSLFPVQSELTYADYRQLA
ELSERLRLGDISIDEVVKNISPSIELITADDNLSEDEVKNSIMRLITKEMSSLLDSGVKDKAVVTLLWKF
DSKDKFARKRVKGRTFSYEFGRLPLEVQDKLDRMIALVLKDNLNSL
>gi|56404003|ref|NP_858167.2| hypothetical protein CP0034 [Shigella flexneri 2a str. 301]
MHQPVKQLIARKFGLSCGFAMSIDTEKIKVRFSQINAGDFLFRHGIPLTFVVKVYPSWRN
>gi|56404004|ref|NP_858166.2| putative transposase [Shigella flexneri 2a str. 301]
MQQPKMTVAMEAGGASHYWAREIRKLDHDVILLPAQHVKAYQRCQKNDYNDAQAIAEACQHGTIRPVPIK
TLEQQDVQTFLNMRRLVSMERTQLINHIRGLLAEYGIVFSKGAAELRQK
>gi|31983773|ref|NP_858170.1| hypothetical protein CP0037 [Shigella flexneri 2a str. 301]
MGSPECVPCHSTSGSVFPALVAETMFPNIAGSRSCIDCHHVAGRTFSKSARRIRGAPLLRRTSRYDAQTS
AFGISNDFRCISYVIPFWVVSSAMNVIPIPSLQTHYRSFITTTNGSAPVSRYVPETGSHVP
>gi|31983774|ref|NP_858171.1| hypothetical protein CP0038 [Shigella flexneri 2a str. 301]
MHQLRHPLLGCVFCNECDPHPFAPDPLQIFHHYYEWVRPCFPIRAGNRFSRSLRWSGPGSCCLHTGCRAV
SKQVSSALIRGRLYGPILASSKISMLHRTVYFRSASRTHVTVDLCLFPESLTTSFLRMKQHRVVWSVLL
>gi|31983598|ref|NP_858172.1| IS629 ORF2 [Shigella flexneri 2a str. 301]
MLREGIRVARCTVARLMAVMGLAGVLRGKKVRTTISRKAVAAGDRVNHQFVAERPDQLWVADFTYVSTWQ
GFVYVAFIIDVFAGCIVGWRVSSSMETTFVLDALEQALWARRPSGTVHHSDKGSQYVSLAYTQRLKEAGL
LASTGSTGDSYDNAMAESINGLYKAEVIHRKSWKNRAEVELATLTWVDWYNNRRLLERLGHTPPAEAEKA
YYASIGNDDLAA
>gi|31983629|ref|NP_858173.1| IS629 ORF1 [Shigella flexneri 2a str. 301]
MTKNTRFSPEVRQRAVRMVLESQGEYDSQWATICSIAPKIGCTPETLRVWVRQHERDTGGGDGGLTTAER
QRLKEPERENRELRRSNNILRLASAYFAKAEFDRLWKK
>gi|31983721|ref|NP_858174.1| IS150 ORF B [Shigella flexneri 2a str. 301]
MRQQQDEQGRFSICSRQAAVVQRLMGILSLKAAIKVKRYRSYRGEVGQTAPYVLQRDFKATRPNEKWVTD
FTEFAVNGRKLYLSPVIDLFNNEVISYSLSERPVMNMVENMLDQAFKKLNEPPRESWRLNFLRKR
>gi|31983775|ref|NP_858175.1| IS1294 transposase [Shigella flexneri 2a str. 301]
MLTRKSIDTVLLSVGAEKLSQREWDWMKMLKPMDPPPAMVAASILERRGDTAALTRLQDTGG
>gi|31983673|ref|NP_858176.1| IS1294 transposase [Shigella flexneri 2a str. 301]
MLSAFTPRPLKRLFTANQCWTSFLDAGGLRDIEVEAVTKMLACGTRILGVKEYICDKPECPHVRYVTNSC
GSRACPSCGKKATDLWIATQLNRLPDCDWVHLVFTLPDTQWPVFESNRWLLNDVCRLAVENLLYAARKRG
QEPGIFCAIHTYGRRLNWHPHVHVSVTCGGLNKHGQWKKLSFLKDAMRSRWMWNMRQRLLKAWSEGLAMP
ESLSHITTESQRRSLVLKAGGKYWHVYMSKKTAGGRNTARYLGRYLKKPPIAASRLAHYNGGASLSFRYL
DHKTGETATETLTQRELVARLKQHIPEKFFKMVRYFGFLANRVCGEKLPQVYRALGMDKPEPVAKVCYAQ
MVKQFLSRDPFECVLCGGRMVYRRAIAGLNVEGLKKNARDISLLRYMPA
>gi|31983636|ref|NP_858177.1| IS150 ORF1(ORF A) [Shigella flexneri 2a str. 301]
MSKPKYPFEKRLEVVNHYFTTDDGYRIISARFGVPRTQVRTWVALYEKHGEKGLIPKPKGVSADPELRIK
VVKAVIEQHMSLNQAAAHFMLAGSGSVARWLKVYEERGEAGLRALKIGTKRNIAISVDPEKAASALELSK
DRRIEDLERQVRFLETRLVYLKKLKALAHPTKK
>gi|31983722|ref|NP_858178.1| IS100 ORF2 [Shigella flexneri 2a str. 301]
MQYISAAPALSQQAVDQEWSYMDFLEHLLHEEKLARHQRKQAMYTRMAAFPAVKTFEEYDFTFATGAPQK
QLQSLRSLSFIERNENIVLLGPSGVGKTHLAIAMGYEAFKIFYDISKISLELYHNIH
>gi|56404005|ref|NP_858179.2| transcriptional activator VirF [Shigella flexneri 2a str. 301]
MMDMGHKNKIDIKVRLHNYIILYAKRCSMTVSSGNETLTIDEGQIAFIERNIQINVSIKKSDSINPFEII
SLDRNLLLSIIRIMEPIYSFQHSYSEEKRGLNKKIFLLSEEEVSIDLFKSIKEMPFGKRKIYSLACLLSA
VSDEEALYTSISIASSLSFSDQIRKIVEKNIEKRWRLSDISNNLNLSEIAVRKRLESEKLTFQQILLDIR
MHHAAKLLLNSQSYINDVSRLIGISSPSYFIRKFNEYYGITPKKFYLYHKKF
>gi|31983705|ref|NP_858180.1| IS2 ORF2 [Shigella flexneri 2a str. 301]
MADNGSAYTAHETRQFARELNLEPCTTAVSSPQSNGIAERFMKTMKEDCIAFMPKPRTALHNLAVAIEHY
NENHPHSALGYLSPREYRRQRVMST
>gi|157042767|ref|YP_001449236.1| OspE2 [Shigella flexneri 2a str. 301]
MLTQTIFPCLPQKQENIILEVSNPVLLSSTVTTDGYTVFNKKAAIYELQIPAANRTKTLKFTATEMQWLT
KINEAGIDEKQSQRYSDF
>gi|56404006|ref|NP_858183.2| putative IS1 encoded protein [Shigella flexneri 2a str. 301]
MPCFTAMRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSISWQHYRIEDRWSYSSLK
>gi|56404007|ref|NP_858182.2| IS1 ORF1 [Shigella flexneri 2a str. 301]
MVRNGKSTAGHQRNLCSHCRKTWQLQFTYTASQPGTHQKIIDMAMNGVGCRASARIMGIGLNTVLRHLKN
SGRSR
>gi|31983640|ref|NP_858184.1| IS1 ORF2 [Shigella flexneri 2a str. 301]
MIVCAEMDEHWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTLATLERLLSLLSAFEVVVWMTDGCPLY
ESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHYLNIKHYQ
>gi|31983584|ref|NP_858187.1| invasion plasmid antigen [Shigella flexneri 2a str. 301]
MIKSTNIQVIGSGIMHQINNIHSLTLFSLPVSLSPSCNEYYLKVWSEWERNGTPGEQRNIAFNRLKICLQ
NQEAELNLSELDLKTLPDLPPQITTLEIRKNLLTHLPDLPPMLKVIHAQFNQLESLPALPETLEELNAGD
NKIKELPFLPENLTHLRVHNNRLHILPLLPPELKLLVVSGNRLDSIPPFPDKLEGLALANNFIEQLPELP
FSMNRAVLMNNNLTTLPESVLRLAQNAFVNVAGNPLSGHTMRTLQQITTGPDYSGPQIFFSMGNSATISA
PEHSLADAVTAWFPENKQSDVSQIWHAFEHEEHANTFSAFLDRLSDTVSARNTSGFREQVAAWLEKLSAS
AELRQQSFAVAADATESCEDRVALTWNNLRKTLLVHQASEGLFDNDTGALLSLGREMFRLEILEDIARDK
VRTLHFVDEIEVYLAFQTMLAEKLQLSTAVKEMRFYGVSGVTANDLRTAEAMVRSREENEFTDWFSLWGP
WHAVLKRTEADRWAQAEEQKYEMLENEYSQRVADRLKASGLSGDADAEREAGAQVMRETEQQIYRQLTDE
VLA
>gi|31983634|ref|NP_858188.1| IS629 ORF1 [Shigella flexneri 2a str. 301]
MTKNTRFSPEVRQRAVRMVLESQGEYDSQWATICSIAPKIGCTPETLRVWVRQHERDTGGGDGGLTTAER
QRLKEPERENRELRRSNDILRQASAYFAKAEFDRLWKK
>gi|31983599|ref|NP_858189.1| IS629 ORF2 [Shigella flexneri 2a str. 301]
MLREGIRVARCTVARLMAVMGLAGVLRGKKVRTTISRKAVAAGDRVNRQFVAERPDQLWVADFTYVSTWR
GFVYVAFIIDVFAGCIVGWRVSSSMGLTFVLDALEQALWARRPSGTVHHSDKGSQYVSLAYTQRLKEAGL
LASTGSTGDSYDNAMAESINGLYKAEVIHRKSWKNRAEVELATLTWVDWYNNRRLQERLGHIPPAEAEKA
YYASIGNDDLAA
>gi|31983725|ref|NP_858190.1| IS600 ORF2 [Shigella flexneri 2a str. 301]
MCRVPGVSRSGYYDRVQHAPSDRKQSDERLKLEIKVAHIRTRETYGTRRLQTELADNGIIVG
>gi|31983622|ref|NP_858191.1| IS600 ORF1 [Shigella flexneri 2a str. 301]
MSRKTQRYSTEFKAEAVKTVPENQLSISEGASRLSVPEGTLGQWVTAARKGLNTPGSRTVAELESEVMQL
RKALNEARLERDILKKATAYFAQESLKNTR
>gi|31983659|ref|NP_858192.1| hypothetical protein CP0059 [Shigella flexneri 2a str. 301]
MEINVTAPALLTDEHILQPFDCGNEVLSNWLRGRAMKNQMLNASRTFVICLEDTLRIVGYYSLATGSVTH
AELGRSLRHNMPNPVPVVLLGRLAVDVCTQGHGFGKWLLSDAIHRVVNLADQVGIKAVMVHAIDDDARAF
YERFGFVQSVVAPNTLFYKV
>gi|56404008|ref|NP_858193.2| hypothetical protein CP0060 [Shigella flexneri 2a str. 301]
MEVFMSTAASVRKTPREHQINIRATDEERAVIDYAASLVNKNRTDFIMELAYQEAKNIILDQRLFVLDNE
RYDSFITQLEAPVQNAEGRERLMAVKPEWK
>gi|56404009|ref|YP_145811.1| hypothetical protein CP0060a [Shigella flexneri 2a str. 301]
MSHNLEHQKVHTRMVKEVLKAVARANNHPYKSVFADFITGHPSCTVCFWETFHKMYPDSPYEYVTFCHTC
RRFDLYETEAEMKADDPKWW
>gi|31983674|ref|NP_858194.1| IS1294 transposase [Shigella flexneri 2a str. 301]
MTRSGGDFQPRPLKRLFTTNQCWTSFLDAGGLRDIEVEAVTKMLACGTRILGVKEYICDKPECPHVRYVT
NSCGSRACPSCGKKATDLWIATQLNRLPDCDWVHLVFTLPDTQWPVFESNRWLLNDVCRLAVENLLYAAR
KRGQEPGIFCAIHTYGRRLNWHPHVHVSVTCGGLNKHGQWKKLSFLKDAMRSRWMWNMRQRLLKAWSEGL
AMPESLSHITTESQRRSLVLKAGGKYWHVYMSKKTAGGRNTARYLGRYLKKPPIAASRLAHYNGGASLSF
RYLDHKTGETATETLTQRELVARLKQHIPEKFFKMVRYFGFLANRVCGEKLPQVYRALGMDKPEPVAKVC
YAQMVKQFLSRDPFECVLCGGRMVYRRAIAGLNVEGLKKNARDISLLRYMPA
>gi|31983726|ref|NP_858195.1| ISSfl1 ORF2 [Shigella flexneri 2a str. 301]
MQREKTPEWREKQKSSRGIRRGQGYRLVFQFPIRERCFGRLKEYRRIATRYDKTARNYLAMVKLGCIRLF
YQRLRN
>gi|31983556|ref|NP_858196.1| hypothetical protein CP0063 [Shigella flexneri 2a str. 301]
MKIPEAVNHINVQNNIDLVDGKINPNKDTKALQKNISCVTNSSSSGISEKHLDHCADTVKSFLRKSIAAQ
SYSKMFSQGTSFKSLNLSIEAPSGARSSFRSLEHLDKVSRHYLSEIIQKTHPLSSDERHLLSIIINSDFN
FRHQSNANLSNNTLNIKSFDKIKSENIQTYKNTFSEDIEEIANHDFVFFGVEISNHQETLPLNKTHHTVD
FGANAYIIDHDSPYGYMTLTDHFDNAIPPVFYHEHQSFFLDNFKEVVDEVSRYVHGNQGKTDVPIFNTKD
MRLGIGLHLIDFIRKSKDQRFREFCYNKNIDPVSLDRIINFVFQLEYHIPRMLSTDNFKKIRLRDISLED
AIKASNYEEINNKVTDKKMAHQALAYSLGNAKSDMALYLLSKFNFTKQDIAEMEKMNNNMYCELYDVEYL
LSEDSANYKVLEYFISNGLVDVNKRFQKANSGDTMLDNAMKSKDSKTIDFLLKNGAVSGKRFGR
>gi|31983727|ref|NP_858197.1| putative IS1 encoded protein [Shigella flexneri 2a str. 301]
MPCFTAMRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSYASTLKSPSYTKSVSWQHYPLFVERP
>gi|31983631|ref|NP_858198.1| IS1 ORF2 [Shigella flexneri 2a str. 301]
MSRQCTHYGRWPQHGFTSLKKLRPQSVTSRIQPGSDVIVCAEMDEHWGYVGAKSRQRWLFYAYDRIRRTV
VAHVFGERTLATLERLLSLLSAFEVVVWMTDGCPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLV
RKSLNRPGNPGD
>gi|31983630|ref|NP_858199.1| IS629 ORF1 [Shigella flexneri 2a str. 301]
MTKNTRFSPEVRQRAVRMVLESQGEYDSQWATICSIAPKIGCTPETLRVWVRQHERDTGGGDGGLTTAER
QRLKEPERENRELRRSNNILRLASAYFAKAEFDRLWKK
>gi|31983600|ref|NP_858200.1| IS629 ORF2 [Shigella flexneri 2a str. 301]
MLREGIRVARCTVARLMVVMGLAGVLRGKKVRTTISRKAVAAGDRVNRQFVAERPDQLWVADFTYVSTWQ
GFVYVAFIIDVFAGCIVGWRVSSSMETTFVLDALEQALWARRPSGTVHHSDKGSQYVSLAYTQRLKEAGL
LASTGSTGDSYDNAMAESINGLYKAEVIHRKSWKNRAEVELATLTWVDWYNNRRLLERLGHIPPAEAEKA
YYASIGNDDLAA
>gi|31983728|ref|NP_858201.1| putative protein encoded within IS [Shigella flexneri 2a str. 301]
MLPSETMIWQPEFTDKTLSRKPGAVHAVRQQRSKALLTSLNEWMVEKNGTLSKKSRLGEAFSYVLNQWDA
LCYYSDDGLAEADNNTAERALRTVCLGKKNYMFFGSDHGGDRGALLYGLIGSCRLNGIDPEAYLRHILSV
LPEWPSNRVDELLPWNVVLTDK
>gi|31983694|ref|NP_858202.1| IS21 ORF2 [Shigella flexneri 2a str. 301]
MTLTELLWRESEKLRRYKKEARLPVAKTLSEYDFIQLPELNGAQFQQLCETTDWVDAGENVLLFGASGLG
KSHLAAAIVDGVVGQGYRARFYSAGELLQELRKARAQLKLNELLLKLDRYRVIVVDDLGYVKRDSAETGV
LFELIAHRYERGSLVITSNHPFSMWGSIFVDETMAVAAADRLIHHGYMFELKGESYRKKTAKAVTSVT
>gi|31983545|ref|NP_858203.1| extracellular serine protease SepA [Shigella flexneri 2a str. 301]
MNKIYYLKYCHITKSLIAVSELARRVTCKSHRRLSRRVILTSVAALSLSSAWPALSATVSAEIPYQIFRD
FAENKGQFTPGTTNISIYDKQGNLVGKLDKAPMADFSSATITTGSLPPGDHTLYSPQYVVTAKHVSGSDT
MSFGYAKNTYTAVGTNNNSGLDIKTRRLSKLVTEVAPAEVSDIGAVSGAYQAGGRFTEFYRLGGGMQYVK
DKNGNRTQVYTNGGFLVGGTVSALNSYNNGQMITAQTGDIFNPANGPLANYLNMGDSGSPLFAYDSLQKK
WVLIGVLSSGTNYGNNWVVTTQDFLGQQPQNDFDKTIAYTSGEGVLQWKYDAANGTGTLTQGNTTWDMHG
KKGNDLNAGKNLLFTGNNGEVVLQNSVNQGAGYLQFAGDYRVSALNGQTWMGGGIITDKGTHVLWQVNGV
AGDNLHKTGEGTLTVNGTGVNAGGLKVGDGTVILNQQADADGKVQAFSSVGIASGRPTVVLSDSQQVNPD
NISWGYRGGRLELNGNNLTFTRLQAADYGAIITNNSEKKSTVTLDLQTLKASDINVPVNTVSIFGGRGAP
GDLYYDSSTKQYFILKASSYSPFFSDLNNSSVWQNVGKDRNKAIDTVKQQKIEASSQPYMYHGQLNGNMD
VNIPQLSGKDVLALDGSVNLPEGSITKKSGTLIFQGHPVIHAGTTTSSSQSDWETRQFTLEKLKLDAATF
HLSRNGKMQGDINATNGSTVILGSSRVFTDRSDGTGNAVFSVEGSATATTVGDQSDYSGNVTLENKSSLQ
IMERFTGGIEAYDSTVSVTSQNAVFDRVGSFVNSSLTLGKGAKLTAQSGIFSTGAVDVKENASLTLTGMP
SAQKQGYYSPVISTTEGINLEDNASFSVKNMGYLSSDIHAGTTAATINLGDSDADAGKTDSPLFSSLMKG
YNAVLRGSITGAQSTVNMINALWYSDGKSEAGALKAKGSRIELGDGKHFATLQVKELSADNTTFLMHTNN
SRADQLNVTDKLSGSNNSVLVDFLNKPASEMSVTLITAPKGSDEKTFTAGTQQIGFSNVTPVISTEKTDD
ATKWVLTGYQTTADAGASKAAKDFMASGYKSFLTEVNNLNKRMGDLRDTQGDAGVWARIMNGTGSADGDY
SDNYTHVQIGVDRKHELDGVDLFTGALLTYTDSNASSHAFSGKNKSVGGGLYASALFNSGAYFDLIGKYL
HHDNQHTANFASLGTKDYSSHSWYAGAEVGYRYHLTKESWVEPQIELVYGSVSGKAFSWEDRGMALSMKD
KDYNPLIGRTGVDVGRAFSGDDWKITARAGLGYQFDLLANGETVLQDASGEKRFEGEKDSRMLMTVGMNA
EIKDNMRLGLELEKSAFGKYNVDNAINANFRYVF
>gi|31983776|ref|NP_858204.1| IS1294 transposase [Shigella flexneri 2a str. 301]
MLTRKSIDTVLLSVGAEKLSQREWDWMKMLKPMDPPPAMVAASILERRGDTAALTRLQDTGG
>gi|31983675|ref|NP_858205.1| IS1294 transposase [Shigella flexneri 2a str. 301]
MLSAFTPRPLKRLFTANQCWTSFLDAGGLRDIEVEAVTKMLACGTRILGVKEYICDKPECPHVRYVTNSC
GSRACPSCGKKATDLWIATQLNRLPDCDWVHLVFTLPDTQWPVFESNRWLLNDVCRLAVENLLYAARKRG
QEPGIFCAIHTYGRRLNWHPHVHVSVTCGGLNKHGQWKKLSFLKDAMRSRWMWNMRQRLLKAWSEGLAMP
ESLSHITTESQRRSLVLKAGGKYWHVYMSKKTAGGRNTARYLGRYLKKPPIAASRLAHYNGGASLSFRYL
DHKTGETATETLTQRELVARLNQHIPEKFFKMVRYFGFLANRVCGEKLPQVYRALGMDKPEPVAKVCYAQ
MVKQFLSRDPFECVLCGGRMVYRRAIAGLNVEGLKKNARDISLLRYMPA
>gi|31983681|ref|NP_858206.1| ISSfl1 ORF1 [Shigella flexneri 2a str. 301]
MFWVLCSSAPWRDLPERYGAWKTVYNRFNRWSKSGVINIIFNRLLSLLDANGFIDWSATALDGSNIRALK
CAAGAQKNIPISTEIMGRVALAAVLAPKSIWQQTEVASR
>gi|31983678|ref|NP_858207.1| ISSfl1 ORF2 [Shigella flexneri 2a str. 301]
MLSPGQAHESQFAQRLLDGIGVQRQNGSMKRRGHAVLADKAYSGRALRNELKNNGIKAVIPRKSNEKMAS
DGRAQLDRDAYCNRNVVERCFGRLKEYRRIATRYDKTARNYLAMVKLGCIRLFYQRLRN
>gi|31983620|ref|NP_858208.1| IS630 orf [Shigella flexneri 2a str. 301]
MPIIAPISRDERRLMQKAIHKTHDKNYARRLTAMLMLHRGDRVSDVARTLCCARSSVGRWINWFTQSGVE
GLKSLPAGRARRWPFEHICTLLRELVKHSPGDFGYQRSRWSTELLAIKINEITGCQLNAGTVRRWLPSVG
IVWRRAAPTLRIRDPHKDEKMAAIHKALDECSAEHPVFYEDEVDIHLHPKIGADWQLRGQQKRVVTPGQN
EKYYLAGALHSGTGKVSYVGGNSKSSALFISLLKRLKATYRRAKTITLIVDNYIIHKSRETQSWLKENPK
FRGIYQPVYSPWVNHVERLWQALHDTITRNHQCRSMWQLLKKVRHFMETVSPFPGGKHGLAKV
>gi|31983616|ref|NP_858209.1| iso-IS1 ORF1 [Shigella flexneri 2a str. 301]
MRFSMTTVTVHCPRCNSDEVYRHGRSCSRHERFRCRSCKRVFQLTYSYEARKLGVKEQIVEMAHNGAGGR
DTARTLKIGINTVIRTLKSSRPGG
>gi|31983729|ref|NP_858210.1| iso-IS1 ORF2 [Shigella flexneri 2a str. 301]
MLAYTCGPRNDETCRELLALLTPFCIGMVTSDDWGSYAREVPEEKHLTGKIFTQRMNVTT
>gi|31983582|ref|NP_858211.1| invasion plasmid antigen [Shigella flexneri 2a str. 301]
MFSVNNTHSSVSCSPSINSNSTSNEHYLRILTEWEKNSSPGEERGIAFNRLSQCFQNQEAVLNLSDLNLT
SLPELPKHISALIVENNKLTSLPKLPAFLKELNADNNRLSVIPELPESLTTLSVRSNQLENLPVLPNHLT
SLFVENNRLYNLPALPEKLKFLHVYYNRLTTLPDLPDKLEILCAQRNNLVTFPQFSDRNNIRQKEYYFHF
NQITTLPESFSQLDSSYRINISGNPLSTRVLQSLQRLTSSPDYHGPQIYFSMSDGQQNTLHRPLADAVTA
WFPENKQSDVSQIWHAFEHEEHANTFSAFLDRLSDTVSARNTSGFREQVAAWLEKLSASAELRQQSFAVA
ADATESCEDRVALTWNNLRKTLLVHQASEGLFDNDTGALLSLGREMFRLEILEDIARDKVRTLHFVDEIE
VYLAFQTMLAEKLQLSTAVKEMRFYGVSGVTANDLRTAEAMVRSREENEFTDWFSLWGPWHAVLKRTEAD
RWAQAEEQKYEMLENEYSQRVADRLKASGLSGDADAEREAGAQVMRETEQQIYRQLTDEVLALRLSENGS
RLHHS
>gi|31983583|ref|NP_858212.1| invasion plasmid antigen [Shigella flexneri 2a str. 301]
MKPINNHSFFRSLCGLSCISRLSVEEQCTRDYHRIWDDWAREGTTTENRIQAVRLLKICLDTREPVLNLS
LLKLRSLPPLPLHIRELNISNNELISLPENSPLLTELHVNGNNLNILPTLPSQLIKLNISFNRNLSCLPS
LPPYLQSLSARFNSLETLPELPSTLTILRIEGNRLTVLPELPHRLQELFVSGNRLQELPEFPQSLKYLKV
GENQLRRLSRLPQELLALDVSNNLLTSLPENIITLPICTNVNISGNPLSTHVLQSLQRLTSSPDYHGPQI
YFSMSDGQQNTLHRPLADAVTAWFPENKQSDVSQIWHAFEHEEHANTFSAFLDRLSDTVSARNTSGFREQ
VAAWLEKLSASAELRQQSFAVAADATESCEDRVALTWNNLRKTLLVHQASEGLFDNDTGALLSLGREMFR
LEILEDIARDKVRTLHFVDEIEVYLAFQTMLAEKLQLSTAVKEMRFYGVSGVTANDLRTAEAMVRSREEN
EFTDWFSLWGPWHAVLKRTEADRWAQAEEQKYEMLENEYSQRVADRLKASGLSGDADAEREAGAQVMRET
EQQIYRQLTDEVLA
>gi|31983645|ref|NP_858213.1| IS629 ORF1 [Shigella flexneri 2a str. 301]
MTKNTRFSPEVRQRAVRMVLESQGEYDSQWATICSIAPKIGCTPETLRVWGRQHERDTGGGDGGLITAER
QRLKEPERENRELRRSNNILRLASAYFAKAEFDRLWKK
>gi|31983601|ref|NP_858214.1| IS629 ORF2 [Shigella flexneri 2a str. 301]
MLREGIRVARCTVARLMAVMGLAGVLRGKKVRTTISRKAVAAGDRVNRQFVAERPDQLWVADFTYVSTWR
GFVYVAFIIDVFAGYIVGWRVSSSMETTFVLDALEQALWARRPSGTVHHSDKGSQYVSLAYTQRLKEAGL
LASTGSTGDSYDNAMAESINGLYKAEVIHRKSWKNRAEVELATLTWVDWYNNRRLLERLGHTPPAEAEKL
IMLPSETMIWQPEFTDKTLSRKPGAVQ
>gi|31983644|ref|NP_858215.1| invasion plasmid gene product [Shigella flexneri 2a str. 301]
MRQLVISITEGLNMSLFTEPKEIERLPSEEIERLYPVLRYRVFISIFLGYMGYYFVRNTTSVLSGVLHMS
ATEIGIISCAGFLSYGISKFVSGLISDRSNSKVFLSLGLFLSGLVNFLIGYIPGIITSVTLFSTMYLLNG
WIQGMGYPPGAKTLVFWYEHRERITWATLWNLSHNVGGALAPVLIGFSFGFFGDSALDHARAAFIFPGVL
CMAMSVLIYFIQVDRPVSVGLPPIEEWKGNVVSHPAKGREQGPRLSIPDIIRKHIIRNNKLIYCCIYGSF
VYILRYGIVSWAPKFLSDSLDVGGKDMGKLASMGGGSVFEIGGVAGMLLAGYLSVRLFRNSKPLTNTLFL
ALTIILLIAYWYVPSGNEYLWLNYTILILLGLAVYGPVMFIGLYSMELVPKEAAGAASGLSGTFSYIFGS
IVATLGMGLVVDYLGWGATFIVLILSAVFAIIFTLMSRERSLEFEKE
>gi|31983730|ref|NP_858216.1| hypothetical protein CP0083 [Shigella flexneri 2a str. 301]
MNAHWSSKKSNFLRKNIKLLTKYLFFESQGIPDKVDIVSRLKTYGYSISGVETDDGYKALVRAFQLHFRQ
KNYDGIMDAETAAILYALLEKYFPGK
>gi|31983652|ref|NP_858217.1| iso-IS10R ORF [Shigella flexneri 2a str. 301]
MCELDILHDSLYQFCPELHLKRLNSLTLACHALLDCKTLTLTELGRNLPTKARTKHNIKRIDRLLGNRHL
HKERLAVYRWHASFICSGNTMPIVLVDWSDIREQKRLMVLRASVALHGRSVTLYEKAFPLSEQCSKKAHD
QFLADLASILPSNTTPLIVSDAGFKVPWYKSVEKLGWYWLSRVRGKVQYADLGAENWKPISSLHDMSSSH
SKTLGYKRLTKSNPISCQILLYKSRSKGRKNQRSTRTHCHHPSPKIYSASAKEPWILATNLPVEIRTPKQ
LVNIYSKRMQIEETFRDLKSPAYGLGLRHSRTSSSERFDIMLLIALMLQLTCWLAGVHAQKQGWDKHFQA
NTVRNRNVLSTVRLGMEVLRHSGYTITREDSLVAATLLTQNLFTHGYVLGKL
>gi|31983649|ref|NP_858218.1| IS100 ORF2 [Shigella flexneri 2a str. 301]
MLHEEKLARHQRKQAMYTRMAAFPAVKMFEEYDFTFATGAPQKQLQSLRSLSSERSPHNFPKT
>gi|31983731|ref|NP_858219.1| putative protein encoded within IS [Shigella flexneri 2a str. 301]
MRATAEEALKRISELYAIEDEIRGLPESECLAVRQQRSKALLTSLHEWMVEKNGTLSKKSRLGEAFSYVL
NQWDALCYYSDDGLAEADNNTAERALRAVCLGKKNYVFFGSDHGGERGALLYGLIGTCRLNGIDPEAYLR
HILSVLPEWPSNRVDDLLPWKVVLPSG
>gi|31983602|ref|NP_858220.1| IS629 ORF2 [Shigella flexneri 2a str. 301]
MLREGIRVARCTVARLMAVMGLAGVLRGKKVRTTISRKAVAAGDRVNRQFVAERPDQLWVADFTYVSTWQ
GFVYVAFIIDVFAGYIVGWRVSSSMETTFVLDALEQALWARRPSGTVHHSDKGSQYVSLAYTQRLKEAGL
LASTGSTGDSYDNAMAESINGLYKAEVIHRKSWKNRAEVELATLTWVDWYNNRRLLERLGHTPPAEAEKL
IMLPSETMIWQPEFTDKTLSRKPGAVQSASPVPPDRARHSGPRITCVRRQKKP
>gi|31983648|ref|NP_858221.1| IS629 ORF1 [Shigella flexneri 2a str. 301]
MTKNTRFSPEVRQRAVRMVLESQGEYDSQWATICSIAPKIGCTPETLRVWGRQHERDTGGGDGGLTTAER
QRLKEPERENRELRRSNDILRQASAYFAKAEFDRLWKK
>gi|31983606|ref|NP_858222.1| transposase/IS protein [Shigella flexneri 2a str. 301]
MDFLEHLLHEEKLARHQRKQAMYTRMAAFPAVKTFEEYDFTFATGAPQKQLQSLRSLSFIERNENIVLLG
PSGVGKTHLAIAMGYEAVRVGIKVRFTTAADLLLQLSTAQRQGRYKTTLQRGVMAPRLLIIDEIGYLPFS
QEEAKLFFQVIAKRYEKSAMILTSNLPFGQWDQTFAGDAALTSAMLGRILHHSHVVQIKGESYRLRQKRK
AGVIAEANPE
>gi|31983732|ref|NP_858223.1| IS1294 transposase [Shigella flexneri 2a str. 301]
MSGRHIPQQTDIPRVFLQPLHIQSRDGPAVYHPAATQHAFERVTTQELFHHLCIAHFRHWFRFIHPQSTV
HLRQLLSTHPVGKEPEVPHHLKKLLRDVLFQPRDQLTLCPERSPHNFPKT
>gi|31983742|ref|NP_858297.1| IS1294 transposase [Shigella flexneri 2a str. 301]
MVRYFGFLANRVCGEKLPQVYRALGMDKPEPVAKVCYAQMVKQFLSRDPFECVLCGGRMVYRRAIAGLNV
EGLKKNARDISLLRYMPA
>gi|31983653|ref|NP_858224.1| iso-IS10R ORF [Shigella flexneri 2a str. 301]
MCELDILHDSLYQFCPELHLKRLNSLTLACHALLDCKTLTLTELGRNLPTKARTKHNIKRIDRLLGNRHL
HKERLAVYRWHASFICSGNTMPIVLVDWSDIREQKRLMVLRASVALHGRSVTLYEKAFPLSEQCSKKAHD
QFLADLASILPSNTTPLIVSDAGFKVPWYKSVEKLGWYWLSRVRGKVQYADLGAENWKPISNLHDMSSSH
SKTLGYKRLTKSNPISCQILLYKSRSKGRKNQRSTRTHCHHPSPKIYSASAKEPWILATNLPVEIRTPKQ
LVNIYSKRMQIEETFRDLKSPAYGLGLRHSRTSSSERFDIMLLIALMLQLTCWLAGVHAQKQGWDKHFQA
NTVRNRNVLSTVRLGMEVLRHSGYTITREDSLVAATLLTQNLFTHGYVLGKL
>gi|31983676|ref|NP_858225.1| IS1294 transposase [Shigella flexneri 2a str. 301]
MTRSGGDFQPRPLKRLFTTNQCWTSFLDAGGLRDIEVEAVTKMLACGTRILGVKEYICDKPECPHVRYVT
NSCGSRACPSCGKKATDLWIATQLNRLPDCDWVHLVFTLPDTQWPVFESNRWLLNDVCRLAVENLLYAAR
KRGQEPGIFCAIHTYGRRLNWHPHVHVSVTCGGLNKHGQWKKLSFLKDAMRSRWMWNMRQRLLKAWSEGL
AMPESLSHITTESQRRSLVLKAGGKYWHVYMSKKTAGGRNTARYLGRYLKKPPIAASRLAHYNGGASLSF
RYLDHKTGETATETLTQPDESPNDFYQNH
>gi|31983552|ref|NP_858226.1| hypothetical protein CP0093 [Shigella flexneri 2a str. 301]
MPSVNLIPSRKICLQNMINKDNVSVETIQSLLHSKQLPYFSDKRSFLLNLNCQVTDHSGRLIVCRHLASY
WIAQFNKSSGHVDYHHFAFPDEIKNYVSVSEEEKAINVPAIIYFVENGSWGDIIFYIFNEMIFHSEKSRA
LEISTSNHNMALGLKIKETKNGGDFVIQLYDPNHTATHLRAEFNKFNLAKIKKLTVDNFLDEKHQKCYGL
ISDGMSIFVDRHTPTSMSSIIRWPDNLLHPKVIYHAMRMGLTELIQKVTRVVQLSDLSDNTLELLLAAKN
DDGLSGLLLALQNGHSDTILAYGELLETSGLNLDKTVELLTAEGMGGRISGLSQALQNGHAETIKTYGRL
LKKRAINIEYNKLKNLLTAYYYDEVHRQIPGLMFALQNGHADAIRAYGELILSPPLLNSEDIVNLLASRR
YDNVPGLLLALNNGQADAILAYGDILNEAKLNLDKKAELLEAKDSNGLSGLFVALHNGCVETIIAYGKIL
HTADLTPHQASKLLAAEGPNGVSGLIIAFQNRNFEAIKTYMGIIKNENITPEEIAEHLDKKNGSDFLEIM
KNIKS
>gi|31983558|ref|NP_858227.1| OspC1, secreted by the Mxi-Spa secretion machinery, function unknown [Shigella flexneri 2a str. 301]
MNISETLNSANTQCNIDSMDNRLHTLFPKVTSVRNAAQQTMPDEKNLKDSANIIKSFFRKTIAAQSYSRM
FSQGSNFKSLNIAIDAPSDAKASFKAIEHLDRLSKHYISEIREKLHPLSAEELNLLSLIINSDLIFRHQS
NSDLSDKILNIKSFNKIQSEGICTKRNTYADDIKKIANHDFVFFGVEISNHQKKHPLNTKHHTVDFGANA
YIIDHDSPYGYMTLTDHFDNAIPPVFYHEHQSFLDKFSEVNKEVSRYVHGSKGIIDVPIFNTKDMKLGLG
LYLIDFIRKSEDQSFKEFCYGKNLAPVDLDRIINFVFQPEYHIPRMVSTENFKKVKIREISLEEAVTASN
YEEINKQVTNKKIALQALFLSITNQKEDVALYILSNFEITRQDVISIKHELYDIEYLLSAHNSSCKVLEY
FINKGLVDVNTKFKKTNSGDCMLDNAIKYENAEMIKLLLKYGATSDNKYI
>gi|31983733|ref|NP_858228.1| ISSfl4 ORF3 [Shigella flexneri 2a str. 301]
MDTSLAHENARLRALLQTQQDTIHQMAEYNRLLSQRMAAYASEINRLKALVAKLQRMQFGKSSEKLRAKT
ERQIPFSRAIYATQALGCSDCSIKAILNS
>gi|56404010|ref|NP_858230.2| hypothetical protein CP0097 [Shigella flexneri 2a str. 301]
MTLPVFITVIADHDKPQPSGCLLESQGSLCPICRQRITHETGWNVHHKVKKVMGAVKNYLTLSCYIQIAI
DSYTVVKPALSKRAYKGLSGVPGNRYAPFLGEGSPAMNCPYPTNIQNERNVLESAYNPL
>gi|56404011|ref|NP_858229.2| putative IS91 ORF2 [Shigella flexneri 2a str. 301]
MVCNYRYKNRQCHCLSGGYMARSAKSRKRKPASQRSKLPRYVVKLHEDDFFDEEDAEVLRFD
>gi|31983679|ref|NP_858231.1| ISSfl1 ORF2 [Shigella flexneri 2a str. 301]
MLSPGQAHESQFAQRLLDGIGVQRQNGSMKRRGHAVLADKAYSGRALRNELKNNGIKAVIPRKSNEKMAS
DGRAQLDRDAYCNRNVVERCFGRLKEYRRIATRYDKTARNYLAMVKLGCIRLFYQRLRN
>gi|31983682|ref|NP_858232.1| ISSfl1 ORF1 [Shigella flexneri 2a str. 301]
MQSRFFTILRSNRHNLCGDLQQGMVHKSDSDELSALRAENARIIKPLLPPEPATPRAGRPWAEHRKIING
MFWVLCSSAPWRDLPERYGAWKTVYNRFNRWSKSGVINIIFNRLLSLLDANGFIDWSATALDGSNIRALK
CAAGAQKNIPISTEIMGRVALAAVLAPKSIWQQTEVASR
>gi|31983736|ref|NP_858233.1| hypothetical protein CP0100 [Shigella flexneri 2a str. 301]
MSWLISQCAHQCTDNKKTETDAIYDKVRSSYLLSCILKKNKNVGLILHAPSFVSVSEKIARIVMANYSRN
WSNSELASAVLMSESSLKRRMYKEVGSISTFVHKIKLTEAIRKLRRTNTPISVISSELGYSSPSYFSKVF
FKYLKTYPQNIRKKNGR
>gi|31983627|ref|NP_858234.1| ISSfl2 ORF [Shigella flexneri 2a str. 301]
MTESSDYESVQVFIGVDVGKDTHHAVAINRSGKRLFDKALPNDENKLRSLISDLKQHGQILLVVDQPATI
GALPVAVARSEGVLVGYLPGLAMRRIADLHAGEAKTDARDAAIIAEAARTLPHALRTLKLADEQIAELSM
LCGFDDDLAAQTTQASNRILGLLTQIHPAPERVLGPRLEHPAVLDLLQRYPSPEKLASLGEKKLAAQLCK
LAPRLGKRLAADIAQALAEQTVVVPGTNAAAVVLPRLALQLITLRKQRDEVALEVEQRVLAHPLYPVLTS
MPGVGVRTAARLLTEVACRAFASAAHLAAYAGLAPVTRRSGSSIRGEHPSRRGNKALKRALFLSAFAALR
DPLSRAYYTRKMSQGKRHNQVLIALARRRCDVLFAMMRDGTFYTPQGS
>gi|31983737|ref|NP_858235.1| hypothetical protein CP0102 [Shigella flexneri 2a str. 301]
MKKQIFINNKPPVVPYSGTHAKIFKYIEIPLPFFYFIYTSGEPFHISVQNTVIYVSKYNGIFINKLVPFS
LLFDRDISVLQRRDICVVRFTSEEISEHNVLFDHDIERLKKISKAQLISPDYVLIDFSSGGPIKLSSML
>gi|31983650|ref|NP_858238.1| insertion element IS2 transposase InsD [Shigella flexneri 2a str. 301]
MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVIGELPTYGYRR
VWALLRRQAELDGMPAINAKRVYRLMRQNALLLERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDN
GERLRVTFALDCCDREALHWAGTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQ
FARMLGLEPKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRS
PREYLRQRACNGLSDNRCLEI
>gi|31983637|ref|NP_858239.1| insertion sequence 2 OrfA protein [Shigella flexneri 2a str. 301]
MIVLILVFRLVIGEQIIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQE
GSLTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLPGDGE
>gi|31983689|ref|NP_858240.1| IS600 ORF2 [Shigella flexneri 2a str. 301]
MCQVFGVSRSGYYNWVQHEPSDRKQSDERLKLEIKVAHIRTRETYGTRRLQTELAENGIIVGRDRLARLR
KELRLRCKQKRKFRATTNPNHNLPVAPNLLNQTFAPTAPNQVWVADLTYVATQEGWLYLAGIKDVYTCEI
VGYAMGERMTKELTGKALFMALRSQRPPAGLIHHSDRGSQYCAYDYRVIQEQSGLKTSMSRKGNCYDNAP
MESFWGTLKNESLSHYRFNNRDEAISVIREYIEIFYNRQRRHSRLGNISPAAFREKYHQMAA
>gi|31983687|ref|NP_858241.1| IS600 ORF1 [Shigella flexneri 2a str. 301]
MSRKTQRYSKEFKAEAVRTVLENQLSISEGASRLSLPEGTLGQWVTAARKGLGTPGSRTVAELESEILQL
RKALNEARLERDILKKATAYFAQESLKNTR
>gi|31983657|ref|NP_858242.1| hypothetical protein CP0109 [Shigella flexneri 2a str. 301]
MGCVTAPEPLSSFHQVAEFVSSEAVLDDWLKQKELKNQAIGATRTFVVCRKGTQQIVGFYSLATGSVNHT
EATGNLRRNMPDPIPVIILARLAVDVSFRGKGLGADLLHDAVRRCYRVAENIGVRAIMVHALTENAKQFY
IHHGFKPSKTQVQTLFLKLPQ
>gi|56404012|ref|NP_858243.2| hypothetical protein CP0110 [Shigella flexneri 2a str. 301]
MIYGGFMKSGVQLNLRARESQRILIDAAAEILHKSRTDFILEMACKAAEDVILDRRVFNFNDRQYEEFIE
MLDAPVADDPAIEKLLARKPQWDV
>gi|31983777|ref|NP_858244.1| hypothetical protein CP0111 [Shigella flexneri 2a str. 301]
MTLTTTALNGSSSRRFEGCVWTPPLISHTALHPTSRHWMHSWHTYAGNAEIPGL
>gi|31983612|ref|NP_858245.1| ISSfl4 ORF3 [Shigella flexneri 2a str. 301]
MNNELPDDIELLKAMLRKQQSRLRQYACQVAGYEQEIERLKAQLDRLRRMLFGQSSEKKRHKLENQIRQA
EKRLSELENRLNTARNLLEDASSVTDSPDTSPPSENPIASKPEFPGRKSSRKPLPAELPRETHRLLPAET
SCPACGGVLKEMGETISEQLDIINTAFKVIETIRPKLACSRCDVIVQAPLPPKPIERGYASAGLLARILV
SKYMEHIPLYRQSEIYARQGVELSRNTMVRWVSEMADKLRPLYIALNDYVLEAGKVHADDTPVKVLAPGN
GKTKTGRLWVYVRDDRNAGSSLPAAVWFAYSADRKGEHPQLHLAKYQGVLPADAYAGYNVLYETGRVKEA
GCLAHARRKIHDEDVRRPTEMTQEALRRIAELYDIEAEIRGSPAEERLAVRKARSVQLMQSLYDWIQLQR
KTLSKHAEMAKAFDYILNHWNALNEFCRDGRVEIDNNIGENALRSVAVGRKNYLFFGSDKGGESAAIIYS
LLVTCKQNEVEPEDWLREVIEKLNDWPSNQVHELLPWNFSSVK
>gi|31983696|ref|NP_858246.1| ISSfl4 ORF2 [Shigella flexneri 2a str. 301]
MITLPTGTKIWIIAGITDMRCGFNGLASKVQNTLKDDPFSGHIFVFRGRSGKMVKILWADRDGLCLFAKR
LAGDPGRESAPDASSVIHATGGDRVATSQTDRTAWHPDITRDKTRE
>gi|31983697|ref|NP_858247.1| ISSfl4 ORF1 [Shigella flexneri 2a str. 301]
MNSQTTKDIPCFRSYLPDALRLRFEDKLTIRAIAQRLGLSHSTIHTLFQRFLASGIAWPLPDSVSFAQLD
AILYANRKKELTEPQIREGSWRKERRTSYSREFKVRLAKQALQPGAVVARIAREHDINNNLLVKWKSQYE
DGLLSDDDIQECMPVPVALTDTPEPTRPVTNPFWRNKHDERPEGAPGNVPRCELHLKSGVVKLFDPLTPE
LLRALIREMKGGIR
>gi|31983557|ref|NP_858248.1| OspC3 [Shigella flexneri 2a str. 301]
MKIPEAVNHINVQNNIDLVDGKINPNKDTKALQKNISCVTNSSSSGISEKHLDHCADTVKSFLRKSIAAQ
SYSKMFSQGTSFKSLNLSIEAPSGARSSFRSLEHLDKVSRHYLSEIIQKTHPLSSDERHLLSIIINSDFN
FRHQSNANLSNNTLNIKSFDKIKSENIQTYKNTFSEDIEEIANHDFVFFGVEISNHQETLPLNKTHHTVD
FGANAYIIDHDSPYGYMTLTDHFDNAIPPVFYHEHQSFFLDNFKEVVDEVSRYVHGNQGKTDVPIFNTKD
MRLGIGLHLIDFIRKSKDQRFREFCYNKNIDPVSLDRIINFVFQLEYHIPRMLSTDNFKKIKLRDISLED
AIKASNYEEINNKVTDKKMAHQALAYSLGNKKADIALYLLSKFNFTKQDVAEMEKMKNNRYCNLYDVEYL
LSKDGANYKVLEYFINNGLVDVNKKFQKVNSGDTMLDNAMKSKDSKMIDFLLKNGAILGKRFEI
>gi|31983623|ref|NP_858249.1| IS600 ORF1 [Shigella flexneri 2a str. 301]
MSRKTQRYSTEFKAEAVKTVPENQLSISEGASRLSVPEGTLGQWVTAARKGLNTPGSRTVAELESEVMQL
RKALNEARLERDILKKATAYFAQESLKNTR
>gi|31983703|ref|NP_858250.1| IS600 ORF2 [Shigella flexneri 2a str. 301]
MKRCVGYLVYIRTRETYGTRRLQTELADNGIIVGRDRLARLRKELRLHCKQKRKFRATTNSDHNLPVTPN
LLNQNFTPTAPNQVWVADITYVATREGWLYLAGVKDVYTCEIVGYAMGERMMKELTGKALFMALRSQRLP
AGLIHHTDRGSQYCAYDYRVIQEQSGLKTSMSRKGNCYDNAPMESFWGTLKNESLSHYRFKSRDEAISVI
REYIEIFYNRQRRHSRLGNISPAAFREKYHQMAA
>gi|31983739|ref|NP_858251.1| IS150 ORF B [Shigella flexneri 2a str. 301]
MVDCFDGKVVSWSLSTRPDAELVNTMLDSAVETLNAGERPVIHSDRGGHYRWPGWLERVNAAGLIRSMSR
KGCSPDNAACEGFFGRLKTEMYYGRKWSGITPEKFMQQVDAYIRWYNERRIKLSLGAVSPKMYRQQCGLE
>gi|56404013|ref|NP_858252.2| putative transposase [Shigella flexneri 2a str. 301]
MAEWLGEIQKRVITVCDREADIWHYLYYKVSHGQRGACCTESPAGRGTRQALRTAGSPGNRRKPHAECDA
KRRAGSPSGPDVHQLQRSQHKKSRQQRPGAPAHVCLLPGAGRGRCLLASADVRKSGECRRCTTYCQPLRA
TLADRGIPQGVEKWWYMESLRMQTRDNLERMVVILAFIAVRVLGLRQGGVSEETQNDSCEKILTPTEWKL
LWVKLEGKPLPVQAPTLKWAWGDGMTANAQVVPVGASCGMAGQTSGYG
>gi|31983628|ref|NP_858253.1| ISSfl2 ORF [Shigella flexneri 2a str. 301]
MTESSDYESVLVFIGVDVGKDTHHAVAINRSGKRLFDKALPNDENKLRSLISDLKQHGQILLVVDQPATI
GALPVAVARSEGVLVGYLPGLAMRRIADLHAGEAKTDARNAAIIAEAARTLPHALRTLKLADEQIAELSM
LCGFDDDLAAQTTQASNRIRGLLTQIHPAPERVLGPRLEHPAVLDLLQRYPSPEKLASLGEKKLAAQLCK
LAPRLGKRLAADIAQALAEQTVVVPGTNAAAVVLPRLALQLITLRKQRDEVALEVEQRVLAHPLYPVLTS
MPGVGVRTAARLLTEVACRAFASAAHLAAYAGLAPVTRRSGSSIRGEHPSRRGNKALKRALFLSAFTALR
DPLSRAYYTRKMSQGKRHNQALIALARRRCDVLFAMMRDGTFYTPQGS
>gi|31983607|ref|NP_858254.1| IS100 ORF1 [Shigella flexneri 2a str. 301]
MVTFETVMEIKILHKQGMSSRTIARELGLSRNTVKRYLQAKSEPPKYTPRPAVASLLDEYRDYIRQRIAD
AHPYKIPATVIAREIRDQGYRGGMTILRAFIRSLSVPQEQEPAVRFETEPGRQMQVDWGTMRNGRSPLHV
FVAVPGYSRMLYIEFTDNMRYDTLETCHRNAFRFFGGVPREVLYDNMKTVVLQRDAYQTGQHRFHPSLWQ
FGKEMGFSPRLCRPFRAQTKGKVERMVQYTRNSFYIPLMTRLRPMGSTVDVETANRHGLRWLHDVANQRK
HETIQARPCDRWLEEQQSMLALPPEKKEYDVHPGENLVSFDNPVTLFVPLIMGC
>gi|56404014|ref|NP_858255.2| IpaJ, invasion plasmid antigen [Shigella flexneri 2a str. 301]
MSEQRKPCKRGCIHTGVMLYGVLLQGAIPREYMISHQTDVRVNENRVNEQGCFLARKQMYDNSCGAASLL
CAAKELGVDKIPQYKGSMSEMTRKSSLDLDNRCERDLYLITSGNYNPRIHKDNIADAGYSMPDKIVMATR
LLGLNAYVVEESNIFSQVISFIYPDARDLLIGMGCNIVHQRDVLSSNQRVLEAVAVSFIGVPVGLHWVLC
RPDGSYMDPAVGENYSCFSTMELGARRSNSNFIGYTKIGISIVITNEAL
>gi|31983531|ref|NP_858256.1| transcriptional activator VirB [Shigella flexneri 2a str. 301]
MVDLCNDLLSIKEGQKKEFTLHSGNKVSFIKAKIPHKRIQDLTFVNQKTNVRDQESLTEESLADIIKTIK
LQQFFPVIGREIDGRIEILDGTRRRASAIYAGADLEVLYSKEYISTLDARKLANDIQTAKEHSIRELGIG
LNFLKVSGMSYKDIAKKENLSRAKVTRAFQAASVPQEIISLFPIASELNFNDYKILFNYYKGLEKANESL
SSTLPILKEEIKDLDTNLPPDIYKKEILNIIKKSKNRKQNPSLKVDSLFISKDKRTYIKRKENKTNRTLI
FTLSKINKTVQREIDEAIRDIISRHLSSS
>gi|31983788|ref|NP_858257.1| Acp, putative acyl carrier protein [Shigella flexneri 2a str. 301]
MIKEKILSIVAFCYGIAYSKLSEETKFIEDLSADSLSLIEMLDMISFEFNLRIDESTLEHIITIGDLISV
VKNSTKSI
>gi|31983589|ref|NP_858258.1| hypothetical protein CP0125 [Shigella flexneri 2a str. 301]
MHNVNNTQAPTFLYKATSPSSTEYSELKSKISDIHSSQTSLKTPASVSEKENFATSFNQKCLDFLFSSSG
KEDVLRSIYSNSMNAYAKSEILEFSNVLYSLVHQNGLNFENEKGLQKIVAQYSELIIKDKLSQDSAFGPW
SAKNKKLHQLRQNIEHRLALLAQQHTSGEALSLGQKLLNTEVSSFIKNNILAELKLSNETVSSLKLDDLV
DAQAKLAFDSLRNQRKNTIDSKGFGIGKLSRDLNTVAVFPELLRKVLNDILEDIKDSHPIQDGLPTPPED
MPDGGPTPGANEKTSQPVIHYHINNDNRTYDNRVFDNRVYDNSYHENPENDAQSPTSQTNDLLSRNGNSL
LNPQRALVQKVTSVLPHSISDTVQTFANNSALEKAFNHTPDNSDGIGSDLLTTSSQERSANNSLSRGHRP
LNIQNSSTTPPLHPEGVTSSNDNSSDTTKSSASLSHRVASQINKFNSNTDSKVLQTDFLSRNGDTYLTRE
TIFEASKKVTNSLSNLISLIGTKSGTQERELQEKSKDITKSTTEHRINNKLKVTDANIRNYVTETNADTI
DKNHAIYEKAKEVSSALSKVLSKIDDTSAELLTDDISDLKNNNDITAENNNIYKAAKDVTTSLSKVLKNI
NKD
>gi|31983586|ref|NP_858259.1| hypothetical protein CP0126 [Shigella flexneri 2a str. 301]
MNITTLTNSISTSSFSPNNTNGSSTETVNSDIKTTTSSHPVSSLTMLNDTLHNIRTTNQALKKELSQKTL
TKTSLEEIALHSSQISMDVNKSAQLLDILSRHEYPINKDARELLHSAPKEAELDGDQMISHRELWAKIAN
SINDINEQYLKVYEHAVSSYTQMYQDFSAVLSSLAGWISPGGNDGNSVKLQVNSLKKALEELKEKYKDKP
LYPANNTVSQEQANKWLTELGGTIGKVSQKNGGYVVSINMTPIDNMLKSLDNLGGNGEVVLDNAKYQAWN
AGFSAEDETMKNNLQTLVQKYSNANSIFDNLVKVLSSTISSCTDTDKLFLHF
>gi|56404015|ref|NP_858260.2| IpaC, secreted by the Mxi-Spa secretion machinery, required for entry into epithelial cells [Shigella flexneri 2a str. 301]
MEIQNTKPTQILYTDISTKQTQSSSETQKSQNYQQIAAHIPLNVGKNPVLTTTLNDDQLLKLSEQVQHDS
EIIARLTDKKMKDRSEMSHTLTPENTLDISSLSSNAVSLIISVAVLLSALRTAETKLGSQLSLIAFDATK
SAAENIVRQGLAALSSSITGAVTQVGITGIGAKKTHSGISDQKGALRKNLATAQSLEKELAGSKLGLNKQ
IDTNITSPQTNSSTKFLGKNKLAPDNISLSTEHKTSLSSPDISLQDKIDTQRRTYELNTLSAQQKQNIGR
ATMETSAVAGNISTSGGRYASALEEEEQLISQASSKQAEEASQVSKEASQATNQLIQKLLNIIDSINQSK
NSTASQIAGNIRA
>gi|31983588|ref|NP_858261.1| IpaB, secreted by the Mxi-Spa secretion machinery, required for entry into epithelial cells [Shigella flexneri 2a str. 301]
MHNVSTTTTGFPLAKILASTELGDNTIQAANDAANKLFSLTIADLTANQNINTTNAHSTSNILIPELKAP
KSLNASSQLTLLIGNLIQILGEKSLTALTNKITAWKSQQQARQQKNLEFSDKINTLLSETEGLTRDYEKQ
INKLKNADSKIKDLENKINQIQTRLSELDPESPEKKKLSREEIQLTIKKDAAVKDRTLIEQKTLSIHSKL
TDKSMQLEKEIDSFSAFSNTASAEQLSTQQKSLTGLASVTQLMATFIQLVGKNNEESLKNDLALFQSLQE
SRKTEMERKSDEYAAEVRKAEELNRVMGCVGKILGALLTIVSVVAAAFSGGASLALAAVGLALMVTDAIV
QAATGNSFMEQALNPIMKAVIEPLIKLLSDAFTKMLEGLGVDSKKAKMIGSILGAIAGALVLVAAVVLVA
TVGKQAAAKLAENIGKIIGKTLTDLIPKFLKNFSSQLDDLITNAVARLNKFLGAAGDEVISKQIISTHLN
QAVLLGESVNSATQAGGSVASAVFQNSASTNLADLTLSKYQVEQLSKYISEAIEKFGQLQEVIADLLASM
SNSQANRTDVAKAILQQTTA
>gi|31983576|ref|NP_858262.1| IpgC, cytoplasmic chaperone for IpaB and IpaC [Shigella flexneri 2a str. 301]
MSLNITENESISTAVIDAINSGATLKDINAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNV
DYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDEKLK
IKAQSYLDAIQDIKE
>gi|31983578|ref|NP_858263.1| IpgB1, secreted by the Mxi-Spa machinery, function unknown [Shigella flexneri 2a str. 301]
MQILNKILPQVEFAIPRPSFDSLSRNKLVKKILSVFNLKQRFPQKNFGCPVNINKIRDSVIDKIKDSNSG
NQLFCWMSQERTTYVSSMINRSIDEMAIHNGVVLTSDNKRNIFAAIEKKFPDIKLDEKSAQTSISHTALN
EIASSGLRAKILKRYSSDMDLFNTQMKDLTNLVSSSVYDKIFNESTKVLQIEISAEVLKAVYRQSNTN
>gi|31983579|ref|NP_858264.1| IpgA, similarities to IpgE, putative chaperone [Shigella flexneri 2a str. 301]
MCRKLYDKLYEITGAKLDFNDKNQAFILLEEQIPVCITDNDEYIFLTGLLNEHELFTENIINPEHILILN
YSLSRDYGSSICLLPDTHQCVLTKKHYKKYLSPDELIESLYEFLFCIKLTIANITSEVN
>gi|31983590|ref|NP_858265.1| IcsB, invasion protein [Shigella flexneri 2a str. 301]
MILKISNFIDASNTKGPIRVEDTEHGPILIAQKFNLKDLFFRTLSTINAKINSQILNEQLKNYRLENQKS
LLLFLNTLASEKSAESAFAAYEAAKNSIQHSFTGRDIKLMLNTAERFHGIGTAKNLERHLVFRCWGNRGI
THLGHTSISIKNNLLQEPTHTYLSWYPGGNVTKDTEINYLFEKRSGYSVDTYKQDKLNMISDQTAERLDA
GQEVRNLLNSKQDQNNNKKIFFPRANQKKDPYGYWGVSADKVYIPLSGDNKTKDGKISHNLFGLDETNMS
KFICKKKADAFRQLANYKLISKSENCAGMALNVLKAGNSEIYFPLPDVKLVATPNDVYAYANKVRQRIES
LNQSYNEIMKYIESDFDLSRLTQLRRSYLKSFNKINLIHTPKTFKPLSISLYKHPTENVSSEDFDAVINA
CHSYLVKSAPSNMTRVLNELKTEATDKKEEIIEKSIKIIDYYNSLKSPDLGTKLYIHDLLQINKLLLNNS
HSNI
>gi|31983575|ref|NP_858266.1| hypothetical protein CP0133 [Shigella flexneri 2a str. 301]
MHITNLGLHQVSFQSGDSYKGAEETGKHKGVSVISYQRVKNGERNKGIEALNRLYLQNQTSLTGKSLLFA
RDRAEVFCEAIKLAGGDTSKIKAMMERLDTYKLGEVNKRHINELNKVISEEIRAQLGIKNKKELQTKIKQ
IFTDYLNNKNWGPVDKNISHHGKNYGFQLTPASHMKIGNKNIFVKEYNGKGICCASTRESDHIANMWLSK
VVDDEGKEIFSGIRHGVISAYGLKKNSSERAVAARNKAEELVSAALYSRPELLSQALSGKTVDLKIVSTS
LLTPTSLTGGEESMLKDQVNALKGLNSKRGEPTKLLIRNSDGLLKEVSVNLKVVTFNFGVNELALKMGLG
WRNVDKLNDESICSLLGDNFLKNGVIGGWAAEAIEKNPPCKNDVIYLANQIKEIVTKKLQKNDNGEPYKL
SQRMTLLAYTIGAVPCWNCKSGKDRTGMQDAEIKREIIRKHETGQFSQLNSKLSSEEKRLFSTILMNSGN
MEIQEMNTGVPGNKVMKKLPLSSLELSYSERIGDPKIWNMVKGYSSFV
>gi|31983574|ref|NP_858267.1| IpgE, cytoplasmic chaperone for IpgD [Shigella flexneri 2a str. 301]
MEDLADVICRALGIPLIDIDDQAIMLDDDVLIYIEKEGDSINLLCPFCALPENINDLIYALSLNYSEKIC
LATDDEGGNLIARLDLTGINEFEDVYVNTEYYISRVRWLKDEFARRMKGY
>gi|31983573|ref|NP_858268.1| IpgF, periplasmic protein, similarities to the catalytic site of lyzozymes [Shigella flexneri 2a str. 301]
MSRFVFILLCFIPYLGRADCWDKAGERYNIPSSLLKAIAEKESGFNKSAVNVNNNGSKDYGIMQINDFHS
KRLREMGYSEEMLISHPCLSVHYAAKLLNEFMMMYGRGWEAVGAYNAGTSPKKKKERLKYAEDIYRRYLR
IAAESKQNNRRI
>gi|31983565|ref|NP_858269.1| MxiG, component of the Mxi-Spa secretion machinery, contains one transmembrane segment [Shigella flexneri 2a str. 301]
MSEAKNSNLAPFRLLVKLTNGVGDEFPLYYGNNLIVLGRTIETLEFGNDNFPENIIPVTDSKSDGIIYLT
ISKDNICQFSDEKGEQIDINSQFNSFEYDGISFHLKNMREDKSRGHILNGMYKNHSVFFFFAVIVVLIII
FSLSLKKDEVKEIAEIIDDKRYGIVNTGQCNYILAETQNDAVWASVALNKTGFTKCRYILVSNKEINRIQ
QYINQRFPFINLYVLNLVSDKAELLVFLSKERNSSKDTELDKLKNALIVEFPYIKNIKFNYLSDHNARGD
AKGIFTKVNVQYKEICENNKVTYSVREELTDEKLELINRLISEHKNIYGDQYIEFSVLLIDDDFKGKSYL
NSKDSYVMLNDKHWFFLDKNK
>gi|31983789|ref|NP_858270.1| MxiH, component of the Mxi-Spa secretion machinery [Shigella flexneri 2a str. 301]
MSVTVPNDDWTLSSLSETFDDGTQTLQGELTLALDKLAKNPSNPQLLAEYQSKLSEYTLYRNAQSNTVKV
IKDVDAAIIQNFR
>gi|31983790|ref|NP_858271.1| MxiI, component of the Mxi-Spa secretion machinery [Shigella flexneri 2a str. 301]
MNYIYPVNQVDIIKASDFQSQEISSLEDVVSAKYSDIKMDTDIQVSQIMEMVSNPESLNPESLAKLQTTL
SNYSIGVSLAGTLARKTVSAVETLLKS
>gi|31983564|ref|NP_858272.1| MxiJ, lipoprotein, component of the Mxi-Spa secretion machinery [Shigella flexneri 2a str. 301]
MIRYKGFILFLLLMLIGCEQREELISNLSQRQANEIISVLERHNITARKVDGGKQGISVQVEKGTFASAV
DLMRMYDLPNPERVDISQMFPTDSLVSSPRAEKARLYSAIEQRLEQSLVSIGGVISAKIHVSYDLEEKNI
SSKPMHISVIAIYDSPKESELLVSNIKRFLKNTFSDVKYENISVILTPKEEYVYTNVQPVKEVKSEFLTN
EVIYLFLGMAVLVVILLVWAFKTGWFKRNKI
>gi|31983563|ref|NP_858273.1| MxiK, putative component of the Mxi-Spa secretion machinery [Shigella flexneri 2a str. 301]
MIRMDGIYKKYLSIIFDPAFYINRNRLNLPSELLENGVIRSEINNLIINKYDLNCDIEPLSGVTAMFVAN
WNLLPAVAYFIGSQESRLINHSEMVISYYGGKISKQGEAAIRSGFWHLIAWKENISVGIYERINLLFNPI
ALEGNYTPVERNLSRLNEGMQYAKRHFTGIQTSCL
>gi|56404016|ref|NP_858274.2| MxiN, putative component of the Mxi-Spa secretion machinery [Shigella flexneri 2a str. 301]
MKVCNMQKGTLPVSRHHAYDGVVIKRIEKELCKTIKDRDTESKKKAICVIKEATKKAESLRIDAVCDGYQ
IGIQTAFEHIIDYICEWKLKQNENRRNIEDYITSLLSENLHDERIISTLLEQWLSSLRNTVTELKVVLPK
CNLALRKKLELDLHKYRSDVKIILKYSEGNNYIFCSGNQVVEFSPQDVISGVKIELAEKLTKNDKKYFKE
LAHKKLRQIAEDLLKENPVND
>gi|31983562|ref|NP_858275.1| MxiL, secreted by and putative component of the Mxi-Spa secretion machinery [Shigella flexneri 2a str. 301]
MINQINASNALQQRLNSEEVVNLNERLSSSQSFDEDIIYEIMQYFSQSELNSIDNDELHNKIEQLFNSRF
PYLTAAQKSSLLNKLIDANQYVDLHEGFYASLSIYNNIDFYIKTTTFDSLISVFEAGREADDSTW
>gi|56404017|ref|NP_858276.2| MxiM, lipoprotein, component of the Mxi-Spa secretion machinery [Shigella flexneri 2a str. 301]
MIRHGSNKLKIFILSILLLTLSGCALKSSSNSEKEWHIVPVSKDYFSIPNDLLWSFNTTNKSINVYSKCI
SGKAVYSFNAGKFMGNFNVKEVDGCFMDAQKIAIDKLFSMLKDGVVLKGNKINDTILIEKDGEVKLKLIR
GI
>gi|31983566|ref|NP_858277.1| AraC-like family protein MxiE [Shigella flexneri 2a str. 301]
MEGFFFVRNQNIKFSDNVNYHYRFNINSCAKFLAFWDYFSGALVEHSHAEKCIHFYHENDLRDSCNTESM
LDKLMLRFIFSSDQNVSNALAMIRMTESYHLVLYLLRTIEKEKEVRIKSLTEHYGVSEAYFRSLCRKALG
AKVKEQLNTWRLVNGLLDVFLHNQTITSAAMNNGYASTSHFSNEIKTRLGFSARELSNITFLVKKINEKI
>gi|31983567|ref|NP_858278.1| outermembrane protein MxiD [Shigella flexneri 2a str. 301]
MKKFNIKSLTLLIVLLPLIVNANNIDSHLLEQNDIAKYVAQSDTVGSFFERFSALLNYPIVVSKQAAKKR
ISGEFDLSNPEEMLEKLTLLVGLIWYKDGNALYIYDSGELISKVILLENISLNYLIQYLKDANLYDHRYP
IRGNISDKTFYISGPPALVELVANTATLLDKQVSSIGTDKVNFGVIKLKNTFVSDRTYNMRGEDIVIPGV
ATVVERLLNNGKALSNRQAQNDPMPPFNITQKVSEDSNDFSFSSVTNSSILEDVSLIAYPETNSILVKGN
DQQIQIIRDIITQLDIAKRHIELSLWIIDIDKSELNNLGVNWQGTASFGDSFGASFNMSSSASISTLDGN
KFIASVMALNQKKKANVVSRPVILTQENIPAIFDNNRTFYVSLVGERNSSLEHVTYGTLINVIPRFSSRG
QIEMSLTIEDGTGNSQSNYNYNNENTSVLPEVGRTKISTIARVPQGKSLLIGGYTHETNSNEIISIPFLS
SIPVIGNVFKYKTSNISNIVRVFLIQPREIKESSYYNTAEYKSLISEREIQKTTQIIPSETTLLEDEKSL
VSYLNY
>gi|31983568|ref|NP_858279.1| Mxi-Spa secretion machinery protein [Shigella flexneri 2a str. 301]
MLDVKNTGVFSSAFIDKLNAMTNSDDGDETADAELDSGLANSKYIDSSDEMASALSSFINRRDLEKLKGT
NSDSQERILDGEEDEINHKIFDLKRTLKDNLPLDRDFIDRLKRYFKDPSDQVLALRELLNEKDLTAEQVE
LLTKIINEIISGSEKSVNAGINSAIQAKLFGNKMKLEPQLLRACYRGFIMGNISTTDQYIEWLGNFGFNH
RHTIVNFVEQSLIVDMDSEKPSCNAYEFGFVLSKLIAIKMIRTSDVIFMKKLESSSLLKDGSLSAEQLLL
TLLYIFQYPSESEQILTSVIEVSRASHEDSVVYQTYLSSVNESPHDIFKSESEREIAINILRELVTSAYK
KELSR
>gi|31983569|ref|NP_858280.1| MxiA, innermembrane protein, component of the Mxi-Spa secretion machinery [Shigella flexneri 2a str. 301]
MIQSFLKQVSTKPELIILVLMVMIIAMLIIPLPTYLVDFLIGLNIVLAILVFMGSFYIERILSFSTFPSV
LLITTLFRLALSISTSRLILVDADAGKIITTFGQFVIGDSLAVGFVIFSIVTVVQFIVITKGSERVAEVA
ARFSLDGMPGKQMSIDADLKAGIIDAAGAKERRSILERESQLYGSFDGAMKFIKGDAIAGIIIIFVNLIG
GISVGMSQHGMSLSGALSTYTILTIGDGLVSQIPALLISISAGFIVTRVNGDSDNMGRNIMSQIFGNPFV
LIVTSALALAIGMLPGFPFFVFFLIAVTLTALFYYKKVVEKEKSLSESDSSGYTGTFDIDNSHDSSLAMI
ENLDAISSETVPLILLFAENKINANDMEGLIERIRSQFFIDYGVRLPTILYRTSNELKVDDIVLLINEVR
ADSFNIYFDKVCITDENGDIDALGIPVVSTSYNERVISWVDVSYTENLTNIDAKIKSAQDEFYHQLSQAL
LNNINEIFGIQETKNMLDQFENRYPDLLKEVFRHVTIQRISEVLQRLLGENISVRNLKLIMESLALWAPR
EKDVITLVEHVRASLSRYICSKIAVSGEIKVVMLSGYIEDAIRKGIRQTSGGSFLNMDIEVSDEVMETLA
HALRELRNAKKNFVLLVSVDIRRFVKRLIDNRFKSILVISYAEIDEAYTINVLKTI
>gi|31983544|ref|NP_858281.1| Spa15, putative component of the Mxi-Spa secretion machinery [Shigella flexneri 2a str. 301]
MSNINLVQLVRDSLFTIGCPPSIITDLDSHSAITISLDSMPAINIALVNEQVMLWANFDAPSDVKLQSSA
YNILNLMLMNFSYSINELVELHRSDEYLQLRVVIKDDYVHDGIVFAEILHEFYQRMEILNGVL
>gi|31983538|ref|NP_858282.1| ATP synthase SpaL [Shigella flexneri 2a str. 301]
MSYTKLLTQLSFPNRISGPILETSLSDVSIGEICNIQAGIESNEIVARAQVVGFHDEKTILSLIGNSRGL
SRQTLIKPTAQFLHTQVGRGLLGAVVNPLGEVTDKFAVTDNSEILYRPVDNAPPLYSERAAIEKPFLTGI
KVIDSLLTCGEGQRMGIFASAGCGKTFLMNMLIEHSGADIYVIGLIGERGREVTETVDYLKNSEKKSRCV
LVYATSDYSSVDRCNAAYIATAIAEFFRTEGHKVALFIDSLTRYARALRDVALAAGESPARRGYPVSVFD
SLPRLLERPGKLKAGGSITAFYTVLLEDDDFADPLAEEVRSILDGHIYLSRNLAQKGQFPAIDSLKSISR
VFTQVVDEKHRIMAAAFRELLSEIEELRTIIDFGEYKPGENASQDKIYNKISVVESFLKQDYRLGFTYEQ
TMELIGETIR
>gi|31983791|ref|NP_858283.1| Spa13, component of the Mxi-Spa secretion machinery [Shigella flexneri 2a str. 301]
MEALDKRIIYFLQLENDLEPVGAQSVSQLFNTRRKIAIVKKHIIQYQSERILLKGRIEEIQKDIDEANAS
KRKLLHKESKICKRIGLIKRNNFAKQLILDELSQEDMKYGIR
>gi|31983541|ref|NP_858284.1| Spa32, secreted by and component of the Mxi-Spa machinery [Shigella flexneri 2a str. 301]
MALDNINLNFSSDKQIEKCEKLSSIDNIDSLVLKKKRKVEIPEYSLIASNYFTIDKHFEHKHDKGEIYSG
IKNAFELRNERATYSDIPESMAIKENILIPDQDIKAREKINIGDMRGIFSYNKSGNADKNFERSHTSSVN
PDNLLESDNRNGQIGLKNHSLSIDKNIADIISLLNGSVAKSFELPVMNKNTADITPSMSLQEKSIVENDK
NVFQKNSEMTYHFKQWGAGHSVSISVESGSFVLKPSDQFVGNKLDLILKQDAEGNYRFDSSQHNKGNKNN
STGYNEQSEEEC
>gi|31983540|ref|NP_858285.1| Spa33, component of the Mxi-Spa secretion machinery [Shigella flexneri 2a str. 301]
MCGDWVIRIDTLSFLKKKYEVFSGFSTQESLLHLSKCVFIESSSVFSIPELSDKITFRITNEIQYATTGS
HLCCFSSSLGIIYFDKMPVLRNQVSLDSLHHLLEFCLGSSNVRLATLKRIRTGDIIIVQKLYNLLLCNQV
IIGDYIVNDNNEAKINLSESNGESEHTEVSLALFNYDDINVKVDFILLEKNMTINELKMYVENELFKFPD
DIVKHVNIKVNGSLVGHGELVSIEDGYGIEISSWMVKE
>gi|31983543|ref|NP_858286.1| surface presentation of antigens protein SpaP [Shigella flexneri 2a str. 301]
MLSDMSLIATLSFFTLLPFLVAAGTCYIKFSIVFVMVRNALGLQQVPSNMTLNGIALIMALFVMKPIIEA
GYENYLNGPQKFDTISDIVRFSDSGLMEYKQYLKKHTDLELARFFQRSEEENADLKSAENNDYSLFSLLP
AYALSEIKDAFKIGFYLYLPFVVVDLVISSILLALGMMMMSPITISVPIKLVLFVALDGWGILSKALIEQ
YINIPA
>gi|31983792|ref|NP_858287.1| Spa9, component of the Mxi-Spa secretion machinery [Shigella flexneri 2a str. 301]
MSDIVYMGNKALYLILIFSLWPVGIATVIGLSIGLLQTVTQLQEQTLPFGIKLIGVSISLLLLSGWYGEV
LLSFCHEIMFLIKSGV
>gi|56404018|ref|NP_858288.2| Spa29, component of the Mxi-Spa secretion machinery [Shigella flexneri 2a str. 301]
MDISSWFESIHVFLILLNGVFFRLAPLFFFLPFLNNGIISPSIRIPVIFLVASGLITSGKVDIGSSVFEH
VYFLMFKEIIVGLLLSFCLSLPFWIFHAVGSIIDNQRGATLSSSIDPANGVDTSELAKFFNLFSAVVFLY
SGGMVFILESIQLSYNICPLFSQCSFRVSNILTFLTLLASQAVILASPVMIVLLLSEVLLGVLSRFAPQM
NAFSVSLTIKSLLAIFIIFICSSTIYFSKVQFFLGEHKFFTNLFVR
>gi|31983539|ref|NP_858289.1| surface presentation of antigens protein SpaS [Shigella flexneri 2a str. 301]
MANKTEKPTPKKLKDAAKKGQSFKFKDLTTVVIILVGTFTIISFFSLSDVMLLYRYVIINDFEINEGKYF
FAVVIVFFKIIGFPLFFCVLSAVLPTLVQTKFVLATKAIKIDFSVLNPVKGLKKIFSIKTIKEFFKSILL
LIILALTTYFFWINDRKIIFSQVFSSVDGLYLIWGRLFKDIILFFLAFSILVIILDFVIEFILYMKDMMM
DKQEIKREYIEQEGHFETKSRRRELHIEILSEQTKSDIRNSKLVVMNPTHIAIGIYFNPEIAPAPFISLI
ETNQCALAVRKYANEVGIPTVRDVKLARKLYKTHTKYSFVDFEHLDEVLRLIVWLEQVENTH
>gi|31983704|ref|NP_858290.1| IS600 ORF2 [Shigella flexneri 2a str. 301]
MCRVPGVSRSGYYDRVQHAPSDRKQSDERLKLEIKVAHIRTRETYGTRRLQTELADNGIIVGRDRLARLR
KELRLHCKQKRKFRATTSSDHNLPVTPNLLNQNFTPTAPNQVWVADITYVATREGWLYLAGVKDVYTCEI
VGYAMGERMTKELTGKALFMALRSQHPPAGLIHHSARGSQYCAYDYRVIQEQSGLKTSMSRKGNCYDNAP
MEIFWGTLKNESLSHYRFKSRDISSAYGKTD
>gi|31983621|ref|NP_858291.1| IS600 ORF1 [Shigella flexneri 2a str. 301]
MSRKTQRYSTEFKAEAVKTVPENQLSISEGASRLSVPEGTLGQWVTAARKGLNTPGSRTVAELESEVMQL
RKALNEARLERDILKKATAYFAQESLKNTR
>gi|31983740|ref|NP_858292.1| IS600 ORF2 [Shigella flexneri 2a str. 301]
MESFWGTLKNESLSHYRFKSRDEAISVIREYIEIFYNRQRRHSRLGNISPAAFRIKYYQMTA
>gi|31983778|ref|NP_858293.1| IS1294 transposase [Shigella flexneri 2a str. 301]
MVVSAIASTPQAMCAVTDRAEPRQPDGCKLKTAPVRPGVAARSAEYVCSEDLFY
>gi|31983779|ref|NP_858294.1| IS1294 transposase [Shigella flexneri 2a str. 301]
MLTRKSIDTVLLSVGAEKLSQREWDWMKMLKPMDPPPAMVAASILERRGDTAALTRLQDTGG
>gi|31983780|ref|NP_858295.1| hypothetical protein CP0162 [Shigella flexneri 2a str. 301]
MSGRVKTRCTQSQSGRRFSCVAIHRSVAFFPQDGQARLPHELVTYLTWGHSGLSQMYMLHAQYPRAAGQH
FCDSLNLDIAQTARIQEGCPALVGREQTFQRAGSKSGQHEDGLTPGIL
>gi|31983743|ref|NP_858298.1| IS3 ORF2 [Shigella flexneri 2a str. 301]
MRSGWYTWCQRRTGISPRQQFRQHCDSVVLAAAFTRSKQRYGAPRLTDELRAQGYHFNVKTVAASLRRQG
LRAKASRKFTYRKLKNQTIPLSTPYAT
>gi|31983642|ref|NP_858299.1| IS3 ORF1 [Shigella flexneri 2a str. 301]
MTHMTKTVSTSKKTRKQNSPEFCSEALKLAERIGVAAAARELSLYESQLYAWRSKLQQQMTSSERESELP
A
>gi|56404019|ref|NP_858300.2| hypothetical protein CP0167 [Shigella flexneri 2a str. 301]
MNTALIVALMCMWYAVPAAAKETLLAMPRNSTEHCYAEINVHGPYGVYFRVVPHPPGGKSWVECNSDYYY
SDKPPGVQILGTRAGCRVYGICGTTSTLHVAGRGVVCIKNICSPRGMIIHRIRKRPVVAVSDEM
>gi|31983670|ref|NP_858301.1| hypothetical protein CP0168 [Shigella flexneri 2a str. 301]
MNDNSLLRNSSLFIAYMGCVGWVSAYSYGWGTSFYYGFPWWVVGAGLDDVARSLLYAIIVMGILFTGWGI
GILFFLLIKKRSKIQDLSFFRLFFAITLLFFPVIFELLILKQYFILPLSLSFIISSLVISIIIRIYGRIF
SVSCFSDIPFVREHRIKLIMAGFLVYFWFFSFLVGWYKPQLKKEYQMLCYNNSWYYVLARYDSRLVLSSS
FKDDSNRFLIFNTEQSGFYEINDVYVRK
>gi|56404020|ref|NP_858303.2| hypothetical protein CP0170 [Shigella flexneri 2a str. 301]
MDDRIQAGKADMAACTDEADEPVLGAERTGKGYLEQTMERGKTQRLAEMAAANSDVPMMKNVAKTIGKRL
YGILNAMRHGVSNGNAEALNSKIRLLRIKAKGYRNRERFKLGVMFHYGKLNIAF
>gi|56404021|ref|NP_858302.2| hypothetical protein CP0169 [Shigella flexneri 2a str. 301]
MAFILSSLILLFSASAFPFDTPWRMAFRIPYNLFPIVLATFFIMGTSLLAAAISASRCVFPRSMVCSRYP
LPVLSAPSTGSSASSVHAAISAFPAWIRSSIYRCAATGSEFPLPDDDFQQEDADVHSEPPRESWRLNFLR
KR
>gi|31983643|ref|NP_858304.1| IS629 ORF1 [Shigella flexneri 2a str. 301]
MTKNTRFSPEVRQRAVRMVLESQGEYDSQWATICSIAPKIGCTPETLRVWGRQHERDTGGGDGGLTTAER
QRLKEPERENRELRRSNNILRLASAYFAKAEFDRLWKK
>gi|31983745|ref|NP_858305.1| IS629 ORF2 [Shigella flexneri 2a str. 301]
MLREGIRVARCTVARLMAVMGLAGVLRGKKVRTTISRKAVAAGDRVNRQFVAERPDQLWVADFTYVSTWR
GFVYVAFIIDVFAGYIVGWRVSSSMETTFVLDALEQALWARRPSGTVHHSDKGSQYVSLALHTAA
>gi|31983746|ref|NP_858306.1| IS629 ORF2 [Shigella flexneri 2a str. 301]
MYRWPCTQRLKEAGLLASTGSTGDSYDNAMAESINGLYKAEVIHRKSWKNRAEVELATLTWVDWYNNRRL
QERLGHIPPAEAEKAYYASIGNDDLAA
>gi|31983747|ref|NP_858307.1| putative transposase [Shigella flexneri 2a str. 301]
MLNKRAFFGAFLIFWGFKFLSMDMNAGYIRAARIHLPNAVEKIAFDRFHVAKQPGEVVDKTRQNEPPRFS
WRVFYL
>gi|31983706|ref|NP_858308.1| IS91 orf [Shigella flexneri 2a str. 301]
MLPRFADIFQQGNRWLNWLEKQPVQMSRLEHYAGQDEIGLRYNSHRTKREENLVMSGDEFMERFSWHVAD
KGFRMVIRGPESGEAAITGRCGVRHNGDSEKNGEANHKERDVSAVTEG
>gi|31983639|ref|NP_858309.1| putative IS91 ORF2 [Shigella flexneri 2a str. 301]
MACDYRYKNRQYHCLSGSYMARSAKPRKRKPAPQRSKLLRYVVKLHEDDFFDEEEAEVLRFDNFDDAVEC
CADLNIPFFVDAGNKKLVFWFVRVDDEGYPEIARCTEREFATIPAGINADGMYCPECGTVHWPDGVIPPF
>gi|56404022|ref|NP_858310.2| putative reverse transcriptase [Shigella flexneri 2a str. 301]
MPQGGVISPLLSNIILNEFDQYLNKRYLSGKARKDRWYWNHSIQRGRSTAVKENWQWKPAVAYCCYADDC
VPRRRVLGT
>gi|31983748|ref|NP_858311.1| IS3 ORF2 [Shigella flexneri 2a str. 301]
MCSGYHFNVKTVAASLRRQELSAKASQKFSPISYRAHGLPVSENLLTQDFYASGPNQKWAGDITYYYSSP
TAGKHGAPGY
>gi|31983651|ref|NP_858312.1| IS629 ORF2 [Shigella flexneri 2a str. 301]
MPLLDKLREQYGVGPVCSELHIAPSTYYHCQQQRHHHDKRSARAQRDDWLKKEILRVYDENHQVYAVRKV
WHQLLREGIRVARCTVARLMAVMGLAGVLRGKKVHTTVSRKAVAAGDRVNRHQGNVPRTPGGPQRLVYVV
SAADKDKHTSAVPSALRQRCPQGFYPVQRYGAPRLTDELCALVTTLT
>gi|56404023|ref|NP_858313.2| IS629 ORF1 [Shigella flexneri 2a str. 301]
MTKNTRFSPEVRQRAVRMVLESQGEYDSQWAAICSIAPKIGCILETLRVWVRQHERDTGGGEVGSPPLNV
SV
>gi|56404024|ref|NP_858314.2| VirA, secreted by the Mxi-Spa secretion machinery, function unknown [Shigella flexneri 2a str. 301]
MQTSNITNHERNDSSWMSTVKSTTEVSWNKLSFCDILLKIITFGIYSPHETLAEKHSEKKLMDSFSPSLS
QDKMDGEFAHANIDGISIRLCLNKGICSVFYLDGDKIQSTQLSSKEYNNLLSSLPPKQFNLGKVHTITAP
VSGNFKTHKPAPEVIETAINCCTSIIPNDDYFHVKDTDFNSVWHDIYRDIRASDSNSTKIYFNNIEIPLK
LIADLINELGINEFIDSKKELQMLSYNQVNKIINSNFPQQDLCFQTEKLLFTSLFQDPAFISALTSAFWQ
SLHITSSSVEHIYAQIMSENIENRLNFMPEQRVINNCGHIIKINAVVPKNDTAISASGGRAYEVSSSILP
SHITCNGVGINKIETSYLVHAGTLPSSEGLRNAIPPESRQVSFAIISPDV
>gi|31983529|ref|NP_858315.1| hypothetical protein CP0182 [Shigella flexneri 2a str. 301]
MNQIHKFFCNMTQCSQGGAGELPTVKEKTCKLSFSPFVVGASLLLGGPIAFATPLSGTQELHFSEDNYEK
LLTPVDGLSPLGAGEDGMDAWYITSSNPSHASRTKLRINSDIMISAGHGGAGDNNDGNSCGGNGGDSITG
SDLSIINQGMILGGSGGSGADHNGDGGEAVTGDNLFIINGEIISGGHGGDSYSDSDGGNGGDAVTGVNLP
IINKGTISGGNGGNNYGEGDGGNGGDAITGSSLSVINKGTFAGGNGGAAYGYGYDGYGGNAITGDNLSVI
NNGAILGGNGGHWGDAINGSNMTIANSGYIISGKEDDGTQNVAGNAIHITGGNNSLILHEGSVITGDVQV
NNSSILKIINNDYTGTTPTIEGDLCAGDCTTVSLSGNKFTVSGDVSFGENSSLNLAGISSLEASGNMSFG
NNVKVEAIINNWAQKDYKLLSADKGITGFSVSNISIINPLLTTGAIDYTKSYISDQNKLIYGLSWNDTDG
DSHGEFNLKENAELTVSTILADNLSHHNINSWDGKSLTKSGEGTLILAEKNTYSGFTNINAGILKMGTVE
AMTRTAGVIVNKGATLNFSGMNQTVNTLLNSGTVLINNINAPFLPDPVIVTGNMTLEKNGHVILNNSSSN
VGQTYVQKGNWHGKGGILSLGAVLGNDNSKTDRLEIAGHASGITYVAVTNEGGSGDKTLEGVQIISTDSS
DKNAFIQKGRIVAGSYDYRLKQGTVSGLNTNKWYLTSQMDNQESKQMSNQESTQMSSRRASSQLVSSLNL
GEGSIHTWRPEAGSYIANLIAMNTMFSPSLYDRHGSTIVDPTTGQLSETTMWIRTVGGHNEHNLADRQLK
TTANRMVYQIGGDILKTNFTDHDGLHVGIMGAYGYQDSKTHNKYTSYSSRGTVSGYTAGLYSSWFQDEKE
RTGLYMDAWLQYSWFNNTVKGDGLTGEKYSSKGITGALEAGYIYPTIRWTAHNNIDNALYLNPQVQITRH
GVKANDYIEHNGTMVTSSGGNNIQAKLGLRTSLISQSCIDKETLRKFEPFLEVNWKWSSKQYGVIMNGMS
NHQIGNRNVIELKTGVGGRLADNLSIWGNVSQQLGNNSYRDTQGILGVKYTF
>gi|31983692|ref|NP_858316.1| IS629 ORF1 [Shigella flexneri 2a str. 301]
MTKNTRFSPEVRQRAVRMVLESQGEYDSQWATICSIAPKIGCTPETLRVWVRQHERDTGGGDGGLTTAER
QRLKEPERENRELRRSNDILRQASAYFAKAEFDRLWKK
>gi|31983597|ref|NP_858317.1| IS629 ORF2 [Shigella flexneri 2a str. 301]
MLREGIRVARCTVARLMAVMGLAGVLRGKKVRTTISRKAVAAGDRVNRQFVAERPDQLWVADFTYVSTWR
GFVYVAFIIDVFAGYIVGWRVSSSMETTFVLDALEQALWARRPSGTVHHSDKGSQYVSLVYTQRLKEAGL
LASTGSTGDSYDNAMAESINGLYKAEVIHRKSWKNRAEVELATLTWVDWYNNRRLLERLGHIPPAEAEKA
YYASIGNDDLAA
>gi|56404025|ref|NP_858318.2| bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor [Shigella flexneri 2a str. 301]
MIPLKKNITLIMFTLSLLTGNPAIAYETDKVYKITVLHTNDHHGHFWRNNHGEYGLSSQKTLVDNIRQKV
INNGGSVLLLSGGDINTGVPESDLQKAEPDIRGMNLIGYDAMAVGNHEFDNPLNILRQQEKWATFPFLSA
NIYQKSTGRRLFSPWKIFIRQNLKIAVIGLTTDDTAKTGNSEYFTDIEFRQPAAEARSVIDELNQQEKPD
IIIAATHMGHYDNGESGSNAPGDVEMARSLPTGSLAMIVGGHSQAPVCMASDNKKQWNYIPGTTCVPDKQ
NGIWIVQAHEWGKYVGQADFEFCNGTMKLVNYQLHPVNLKMRITREDGKTEFSFYTPEITEDPQMLSLLT
PFQNKGKAQLDVKVGVVNGRLEGDRSKVRFVQTSMGHLILSALTERIDADFAVVSGGEIRDSIESGNITY
KDILKVQPFGNTVVSIDLTGKEVADYLATVAQMKPDSGAYPQFLNTSFVVKKGKIEMLKIKGKSVDLNKK
YRMTTFSFNATGGDGYPRIDNRPGYINTGFIDAEVLIEYIRKHSPLDAASYEPKGEVSWQ
>gi|31983783|ref|NP_858319.1| hypothetical protein CP0186 [Shigella flexneri 2a str. 301]
MNQKVKSVGSDNVIDDHHVFFADSRCDFVKVVSAYVCDMGMQLLYFVFLLLPVVAEFNLAA
>gi|31983615|ref|NP_858320.1| hypothetical protein CP0187 [Shigella flexneri 2a str. 301]
MPGASNAAMCKITETIKKWRIHRSTAESLLDFARRYNAIVRGWIEYYGKFWSRNFSYRLWSAMQSRLLKW
MQSKYRLSNRKAQRKLALVRKQYPKLFAHWYLLRASNE
>gi|31983750|ref|NP_858321.1| putative reverse transcriptase [Shigella flexneri 2a str. 301]
MKDRNGSGAKGLPHCADGAAATTGDNADGRTAVKSAKPFPVSKRQVWEAYKRVKANRGAAGIDGQTLAGF
DENVTDNLYKLWNRMASGSYMPQAVRRVDIPKADGGVRPLGIPAVSDRIAQMVVKQILEPVLEPLFHADS
YGYRPGKSAHQAIAQARKRCWKFDWVVEVDIKGFFDDIDHDLLLKTVQHHTQARWVVMYIERRLKAPVQM
PDGAMLARGRGTPQGGVISPLLSNLFLHYAFDMWMQRQFPGVPFERYADDVVCHSRI
>gi|31983751|ref|NP_858322.1| IS600 ORF2 [Shigella flexneri 2a str. 301]
MVLRSQRPPAGLIHHSDRGSQYCAYDYRVIQEQFGLKTSMSRKGNCYDNAPMESFWGTLKNGTGTE
>gi|31983547|ref|NP_858323.1| PhoN1, periplasmic non specific acid ohosphatase [Shigella flexneri 2a str. 301]
MKRQLFTLSIVGVFSLNTFASFPPGNDVTTKPDLYYLTNDNAIDSLALLPPPPQIGSIAFLNDQAMYEKG
RLLRNTERGKLAAEDANLSSGGVANVFSAAFGSPITAKDSPELHKLLTNMIEDAGDLATRSAKEYYMRIR
PFAFYGVSTCNTKEQDTLSRNGSYPSGHTSIGWATALVLSEINPARQDTILKRGYELGDSRVICGYHWQS
DVDAARIVGSAIVATLHSNPVFQAQLQKAKDEFANNQKK
>gi|31983680|ref|NP_858324.1| ISSfl1 ORF2 [Shigella flexneri 2a str. 301]
MLSPGQAHESQFAQRLLDGIGVQRQNGSMKRRGHAVLADKAYSGRALRNELKNNGIKAVIPRKSNEKMAS
DGRAQLDRDAYCNRNVVERCFGRLKEYRRIATRYDKTARNYLAIVKLGCIRLFYQRLRN
>gi|31983683|ref|NP_858325.1| ISSfl1 ORF1 [Shigella flexneri 2a str. 301]
MARYDLPDEAWTIIKPLLPPEPATPRAGRPWAEHRKIINGMFWVLCSSAPWRDLPERYGAWKTVYNRFNR
WSKSGVINIIFNRLLSLLDANGFIDWSATALDGSNIRALKCAAGAQKNIPISTEIMGRVALAAVLAPKSI
WQQTEVASR
>gi|56404026|ref|NP_858326.2| hypothetical protein CP0193 [Shigella flexneri 2a str. 301]
MTMATINARIDDDIKNQADEVLKLMNISQTQAIAAFYQYITEQKKLPFVITSIVKTPHDLLRESTDMLAE
ALAVISNLQVWTEQQDGIGKAKLMEYYRRLDALYCCAKEKIGLLSDNRDAELGCVP
>gi|31983536|ref|NP_858327.1| plasmid stable inheritance protein [Shigella flexneri 2a str. 301]
MESSDPKKRKKVVAYLHPALYPQDNLTQQTIDSLPVQMRGDFYRQSLICGAALYSVAPRLLTLISVFFSE
KITAENLVKLIEQTTGYTSTSIDISVLKNIIEASSENKSESITSKDDFEEQTRRNLSMLKK
>gi|31983537|ref|NP_858328.1| plasmid stable inheritance protein [Shigella flexneri 2a str. 301]
MLKVSCDDGSTNVKLAWLEDGEVRTSLSGNSFKEGWNPGLFNAGKVYNYVVDEKKYTYDLGSTAVIGTTH
VSYQYSTTNLLAIHHALLTSGLQPQDVELTVTLPVTEFFDNDNQPNEERIERKKANVLREISLNKGETFK
IKKVNVMPESLPAAFESLKKDKVNKLERSLIIDLGGTTLDCGLILGAFEGISEIRGYSEIGTSRITHTVM
NALTKASTPCNYFIADELIKNRHDNEYLQTLINDVAEIKNISHVIDREVKSLAESIRQEISTFSGMNRIY
LTGGGAELIYPHIKQYFPNLKVNKVDEPQFALVKAMVHA
>gi|31983526|ref|NP_858329.1| hypothetical protein CP0196 [Shigella flexneri 2a str. 301]
MRHGLMEAACERRIPMPNWCSNRMYFPGEPAQIAEIKRLASGAVTPLYRRATNEGIQLFLAGSAGLLQIT
ENIRSEQCPGVTAAGRGAVSTENIAFTRWLTHLQNGVLLDEQNCLMLHELWLQSGTGQRRWEGLPDDARE
TITVHFTAKRGDWCDIWGNEDVSVWWNRLCDNVVPEKTMPFDLLTVLPTRLDVEVNGFNGGVLNGVPSAY
HWYTERYGVKWPCGYDLNISSQGENFIQVDFDTPWCQPESDVIAELSRRFSCTLEHWYAEQGCDFCGWQL
YERGELVNVLWGELEWSSPTDDDEQPEVTGPAWIVDNVAHYGG
>gi|56404027|ref|NP_858330.2| hypothetical protein CP0197 [Shigella flexneri 2a str. 301]
MKYDGDGRATARFFSDKGCRRAPLFTAPADAARHKRCLWSVSRVRRARDGRFYRSRLVSVTVYASPSPFS
DERPSSRFRGITLLSKRRRLRYSTVGLTRYRKR
>gi|56404028|ref|NP_858331.2| putative methylase [Shigella flexneri 2a str. 301]
MSRFVLGNCIDVMARIPDNAIDFILTDPPYLVGFRDRQGRTIAGDKTDEWLQPACNEMYRVLKKDALMVS
FYGWNRVDRFMSAWKNAGFSVVGHLVFTKNYTSKAAYVGYRHECAYILAKGRPRLPQNPLPDVLGWKYSG
NRHHPTEKPVTSLQPLIESFTHPNAIVLDPFAGSGSTCVAALQSGRRYIGIELLEQYHRAGQQRLAAVQR
AMQQGAANDDWFMPEAA
>gi|31983525|ref|NP_858332.1| hypothetical protein CP0199 [Shigella flexneri 2a str. 301]
MNYAGHEKLRAEVAEVANAMCDLRTTMNEMERRYSFNADTLPERLVRQTLFRANRLLMEAYTEILELDSC
FKD
>gi|56404029|ref|NP_858333.2| hypothetical protein CP0200 [Shigella flexneri 2a str. 301]
MRGESMYGTCETLCRALAAKYSGDTPLMLVIWSPEEIQALADGMDISLSDHEIRTVLAHLEDIPED
>gi|31983752|ref|NP_858334.1| hypothetical protein CP0201 [Shigella flexneri 2a str. 301]
MEIISNVRENRQVTVPAELLETLTQIAEQALWKREWAARDHGFPLPEYVTRRQAMVDQARSLLKNNTHEN
D
>gi|31983666|ref|NP_858335.1| hypothetical protein CP0202 [Shigella flexneri 2a str. 301]
MNETLNALICRHARNLLLAQGWPEETDVDQCNPNYPGWISIYVRLDAPRLATLLVNRHDGVLPPHLASAI
QKLTGTGAELVLSGSQWQSLPVLPADGTQVSFPYAGEWLTEDEIRAVLDAVRDAVCSVSCRGAEDARRIR
AALTTSGQTLLTRQTRRFRLVVKESDHPCWLDEDDENLPVVLDAILNRGARFSAVEMYLVSDCIEHILSS
GLACDVLRIPDEPPRRWFDRGVLREVVREARAEIRSMADALAKIRK
>gi|31983604|ref|NP_858336.1| putative transposase [Shigella flexneri 2a str. 301]
MRFVQPRTETQQAIRALHRVRESLIRDKVKTTNQIHGFLLEFGISLPTGDAVIKRLSLVLAEHEIPEYLS
RLLVRLHTHYLYLVEQIAELESELSQSINADDTAQRIMTIPGVGPITASLLSSQLGDGKQFSCSRDFAAS
TGLVPRQYSTGGKSTLLGISKRGDKNLRRLLVQCARSFMMQLERQHGKLAEWVREQLNKKHSNVVACALA
NKLARIA
>gi|31983707|ref|NP_858337.1| ISSfl4 ORF3 [Shigella flexneri 2a str. 301]
MNNELPDDIELLKAMLRKQQSRLRQYACQVAGYEQEIERLKAQLDRLRRMLFGQSSEKKRHKLENQIRQA
EKRLSELENRLNTARNLLEDASSVTDSPDTSPPSENPIASKPESPGRESSRKPLPAELPRETHRLLPAET
SCPACGGVLKEMGETISEQLDIINTAFKVIETIRPKLACSRCDVIVQAPLPPKPIERGYASAGLLARILV
SKYMEHIPLYRQSEIYARQGVELSRNTMVRWVSEMADKLRPLYIALNDYVLEAGKVHADDTPVKVLAPGN
GKTKTGRLWVYVRDDRNAGSSLPAAVWFAYSADRKGEHPQLHLAKYQGVLQADAYAGYNVLYETGRVKEA
GCLAHARRKTHDEDVRRPTEMTQEALRRIAELYDIEAEIRGSPAEERLAVRKARSVQLMQSLYDWIQLQR
KTLSKHAEMAKAFDYILNHWNALNEFCRDGWVEIDNNIGENALRSVAVGRKNYLFFGSDKGGESAAIIYS
LLVTCKQNEVEPEDWLREVIEKLNDWPSNQVHELLPWNFSSVK
>gi|31983698|ref|NP_858338.1| ISSfl4 ORF2 [Shigella flexneri 2a str. 301]
MITLPTGTKIWIIAGITDMRCGFNGLASKVQNTLKDDPFSGHIFVFRGRSGKMVKILWADRDGLCLFAKR
LAGDPGRESAPDASSVIHATGGDRVATSQTDRTAWHPDITRDKTRE
>gi|31983699|ref|NP_858339.1| ISSfl4 ORF1 [Shigella flexneri 2a str. 301]
MNSQTTKDIPCFRSYLPDALRLRFEDKLTIRAIAQRLGLSHSTIHTLFQRFLASGIAWPLPDSVSFAQLD
AILYANRKKELTEPQIREGSWRKERRTSYSREFKVRLAKQALQPGAVVARIAREHDINNNLLVKWKSQYE
DGLLSDDDIQECMPVPVALTDTPEPTRPVTNPFWRNKHDERPEGAPGNVPRCELHLKSGVVKLFDPLTPE
LLRALIREMKGGIR
>gi|31983691|ref|NP_858340.1| IS2 ORF2 [Shigella flexneri 2a str. 301]
MDGPRSSHTDDTDVLLGIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRLMRQNALLLERKPA
VPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLG
AVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTVSAPSATSC
ENCPVWQQSRPSILMDTNDEFPDNKRYSLLPFLFA
>gi|161485953|ref|NP_858341.2| insertion sequence 2 OrfA protein [Shigella flexneri 2a str. 301]
MIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGSLTAVAAGEQVVPA
SELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLPGDGE
>gi|31983665|ref|NP_858342.1| hypothetical protein CP0209 [Shigella flexneri 2a str. 301]
MINGVSLQGTAGYEAHTEEGNVNVKKLLESLNSKSLGDMDKDSELAATLQKMINPSGGDGNCSGCALHAC
MAMLGYGVREAPVPNEISEYMTGFFHRHLEQIDSEGIVSHPNETYSKFRERIAENILQNTSKGSVVMISI
EQATHWIAGFNDGEKIMFLDVQTGKGFNLYDPVEKSPDAFVDENSSVQVIHVSDQEFDHYANSSSWKSKR
LC
>gi|31983617|ref|NP_858343.1| iso-IS1 ORF1 [Shigella flexneri 2a str. 301]
MATVTVHCPRCHSDEVYRHGRSCSRHERFRCRSCKRVFQLTYSYEARKPGVKEQIVEMAHNGAGGRDTAR
TLKIGINTVIRTLKSSRPGG
>gi|31983700|ref|NP_858344.1| ISSfl4 ORF1 [Shigella flexneri 2a str. 301]
MNSQTTKDIPCFRSYLPDALRLRFEDKLTIRAIAQRLGLSHSTIHTLFQRFLASGIAWPLPDSVSFAQLD
AILYANRKKELTEPQIREGSWRKERRTSYSREFKVRLAKQALQPGAVVARIAREHDINDNLLFKWKSQYE
DGLLSDDDIQECMPVPVALTDTPEPTRPVTNPFWRNKHDERPEGAPGNVPRCELHLKSGVVKLFDPLTPE
LLRALIREMKGGIR
>gi|31983701|ref|NP_858345.1| ISSfl4 ORF2 [Shigella flexneri 2a str. 301]
MITLPTGTKIWIIAGITDMRCGFNGLASKVQNTLKDDPFSGHIFVFRGRSGKMVKILWADRDGLCLFAKR
LERGRFVWPVTREGKVHLTPAQLSMLLEGIAWPHPKRTERPGIRI
>gi|31983708|ref|NP_858346.1| ISSfl4 ORF3 [Shigella flexneri 2a str. 301]
MNNELPDDIELLKAMLRKQQSRLRQYACQVAGYEQEIERLKAQLDRLRRMLFGQSSEKKRHKLENQIRQA
EKRLSELENRLNTARNLLEDASSVTDSPDTSPPSENPIASKPEFPGRKSSRKPLPAELPRETHRLLPAET
SCPACGGVLKEMGETISEQLDIINTAFKVIETIRPKLACSRCDVIVQAPLPPKPIERGYASAGLLARILV
SKYMEHIPLYRQSEIYARQGVELSRNTMVRWVSEMADKLRPLYIALNDYVLEAGKVHADDTPVKVLAPGN
GKTKTGRLWVYVRDDRNAGSSLPAAVWFAYSADRKGEHPQLHLAKYQGVLQADAYAGYNVLYETGRVKEA
GCLAHARRKIHDEDVRRPTEMTQEALRRIAELYDIEAEIRGSPAEERLAVRKARSVQLMQSLYDWIQLQR
KTLSKHAEMAKAFDYILNHWNALNEFCRDGWVEIDNNIGENALRSVAVGRKNYLFFGSDKGGESAAIIYS
LLVTCKQNEVEPEDWLREVIEKLNDWPSNQVHELLPWNFSSVK
>gi|31983647|ref|NP_858347.1| IS100 ORF2 [Shigella flexneri 2a str. 301]
MLHEEKLARHQRKQAMYTRMAAFPAVKTFEEYDFTFATGAPQKQLQSLRSLSFIERNENIVLQGTSDITN
PRVGICV
>gi|31983753|ref|NP_858348.1| hypothetical protein CP0215 [Shigella flexneri 2a str. 301]
MNAHWSSKKSNFFRKNIKLLTKYLFFESQGIPDKVDIVSRLKTYGYSISGVETDDGYKALVRAFQLHFRQ
KNYDGIMDAETAAILYALLEKYFPGK
>gi|31983754|ref|NP_858349.1| hypothetical protein CP0216 [Shigella flexneri 2a str. 301]
MEPVYVILNALLDSGRFTRKLILLGLSGTFSYIFGSIVATLGMGLVVDYLGWGATFIVLILSAVFAIIFT
LMSRERSLEFEKE
>gi|31983595|ref|NP_858350.1| hypothetical protein CP0217 [Shigella flexneri 2a str. 301]
MQMKNNTAQATKVITAHVPLPMADKVDQMAARLERSRGWVIKQALSAWLAQEEERNRLTLEALDDVTSGQ
VIDHQAVQSWADSLSTDHLLPVPR
>gi|31983596|ref|NP_858351.1| hypothetical protein CP0218 [Shigella flexneri 2a str. 301]
MELKWTSKALSDLARLYDFLVLASKPAAARTVQSLTQAPVILLTHPRMGEQLFQFEPREVRRIFTGEYEI
RYELTGQTIYVLRLWHTRENR
>gi|31983784|ref|NP_858352.1| hypothetical protein CP0219 [Shigella flexneri 2a str. 301]
MLSGQIFCIPLNNLVGDKINYDEITKITARDWRQYRAPGWQITHQKRYCQTLRVMTPTY
>gi|31983686|ref|NP_858353.1| IS1 ORF2 [Shigella flexneri 2a str. 301]
MSRQRTHYGRWPQHGFTSLKKLRPQSVTSRIQPGSDVIVCAEMDEHWGYVGAKSRQRWLFYAYDRIRRTV
VAHVFGERTLATLERLLSLLSAFEVVVWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLV
RKSLSFSKSVELHDKVIGHYLNIKHYQ
>gi|31983755|ref|NP_858354.1| putative IS1 encoded protein [Shigella flexneri 2a str. 301]
MPCFTAMRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYPAPVSPAAHFLP
NGCGAPRQYNGGYGRCCRSCTGPAGETATP
>gi|31983756|ref|NP_858355.1| putative protein encoded within IS [Shigella flexneri 2a str. 301]
MSDGYSVYKSLADNHPGITSACCWSHAGRGFANLYKASREPRAGVELRKIAGLYRIEKLIRERPVEKIRQ
WR
>gi|31983702|ref|NP_858356.1| ISSfl4 ORF3 [Shigella flexneri 2a str. 301]
MNDLFAWLEEQEPCCPPDGPLNKAINYILNRRDELSCFLGDGAVPLDNNICERAIRPVVMGRKAWLFAGS
LMAGNRAAQIMSLLETAKRNGLEPHAWLTDVLTRLPEWPEERLAELLPLEGFTFTG
>gi|31983593|ref|NP_858357.1| plasmid maintenance protein CcdA [Shigella flexneri 2a str. 301]
MKQRITVTIDSDSYQLLKSANVNISGLVNTAMQKEARRLRAERWQAENQQGMAEIARFIEMNGSFADENR
DW
>gi|229088122|ref|NP_858358.3| plasmid maintenance protein CcdB [Shigella flexneri 2a str. 301]
MQFKVYAYKRESRYRLFVDVQSDIIDTPGRRMVIPLASARLLSDKVSRELYPVVHVGDESWRMMTTDMAS
VPIFVIGEEVADLSHRENDIKNAINLMFWGI
>gi|56404031|ref|NP_858359.2| invasion plasmid antigen, secreted by the Mxi-Spa secretion machinery [Shigella flexneri 2a str. 301]
MLPINNNFSLPQNSFYNTISGTYADYFSAWDKWEKQALPGEERDEAVSRLKECLINNSDELRLDRLNLSS
LPDNLPAQITLLNVSYNQLTNLPELPVTLKKLYSASNKLSELPVLPPALESLQVQHNELENLPALPDSLL
TMNISYNEIVSLPSLPQALKNLRATRNFLTELPAFSEGNNPVVREYFFDRNQISHIPESILNLRNECSIH
ISDNPLSSHALPALQRLTSSPDYHGPRIYFSMSDGQQNTLHRPLADAVTAWFPENKQSDVSQIWHAFEHE
EHANTFSAFLDRLSDTVSARNTSGFREQVAAWLEKLSASAELRQQSFAVAADATESCEDRVALTWNNLRK
TLLVHQASEGLFDNDTGALLSLGREMFRLEILEDIARDKVRTLHFVDEIEVYLAFQTMLAEKLQLSTAVK
EMRFYGVSGVTANDLRTAEAMVRSREENEFTDWFSLWGPWHAVLKRTEADRWAQAEEQKYEMLENEYPQR
VADRLKASGLSGDADAEREAGAQVMRETEQQIYRQLTDEVLALRLPENGSQLHHS
>gi|31983550|ref|NP_858360.1| OspG, secreted by the Mxi-Spa secretion machinery, function unknown [Shigella flexneri 2a str. 301]
MKITSTIIQTPFPFENNNSHAGIVTEPILGKLIGQGSTAEIFEDVNDSSALYKKYDLIGNQYNEILEMAW
QESELFNAFYGDEASVVIQYGGDVYLRMLRVPGTPLSDIDTADIPDNIESLYLQLICKLNELSIIHYDLN
TGNMLYDKESESLFPIDFRNIYAEYYAATKKDKEIIDRRLQMRTNDFYSLLNRKYL
>gi|31983757|ref|NP_858361.1| plasmid mobilization protein [Shigella flexneri 2a str. 301]
MSLAGNPCVIRLVAQVCMWLKFIIRDRGGFSGGLLLFLPVCCRDRTERILAVHTIKILR
>gi|31983646|ref|NP_858364.1| IS629 ORF1 [Shigella flexneri 2a str. 301]
MTKNTRFSPEVRQRAVRMVLESQGEYDSQWATICSIAPKIGCTPETLRVWGLRQHERDTGGGDGGLTTAE
RQRLKEPERENRELRRSNDILRQASAYFAKAEFDRLWKK
>gi|31983603|ref|NP_858365.1| IS629 ORF2 [Shigella flexneri 2a str. 301]
MLREGIRVARCTVARLMAVMGLAGVLRGKKVRMTISRKAVAAGDRVNRQFVAERPDQLWVADFTYVSTWQ
GFVYVAFIIDVFAGYIVGWRVSSSMETTFVLDALEQALWARRPSGTVHHSDKGSQYVSLAYTQRLKEAGL
LASTGSTGDSYDNAMAESINGLYKAEVIHRKSWKNRAEVELATLTWVDWYNNRRLLERLGHIPPAEAEKA
YYASIGNDDLAA
>gi|31983759|ref|NP_858366.1| IS3 ORF2 [Shigella flexneri 2a str. 301]
MAASLRRQGLRAKASRKFSPVSYRAHGLPVSENLLEQDFYASGPNQKWAGDITYLRTDEVRLHPVSTEPH
AF
>gi|31983664|ref|NP_858367.1| hypothetical protein CP0234 [Shigella flexneri 2a str. 301]
MFSKAFLRKISMFFARRKPAAMKICLYHTLNPDTIPGYKKFAQAIATDNFVQADVRKIDTNLYRARLSIR
DRLLFSLYRYHGETICLVLEYIRNHAYNTSRFLRRNVVIDEGRLQQQPVPDPVDIATEALTYINPSHGRF
HRLDKMLSFDDDQQALYEHPLPLVIVGSAGSGKTALVLEKMKQAAGDILYLSLSSFLVEKARTLYDASGE
GSEVQNIDFLSLTEFLETLRIPEGREVTFSAFSDWLPRNRAIAALGAAHTLYEEFRGVIGAVASGNGPLS
REAYLSLGIRQSLYGMEDRPTVYVLFERYIAWLKQSHQYDSNLLSHQYLSLATPRYDVIFVDEVQDMTPV
QLQLVLKTLRHPGQFLLCGDANQIVHPSFFSWSSLKSLFFRQQQGNDTTVNILQANYRNGHHVTALANRL
LRLKQVRFSAIDRESHHFVRSCGQAEGTIRLLDDREETKQELNAKTSLSNRVAVIVMHPEQKAQARCWFS
TPLVFSVQEVKGLEYETVILYNIVSAARQAFDDICEGLTPADLEGEARYSRPRDRQDRSAEIYKFFTNAL
YVALTRAKHNVYLVEQQVEHPLWSLLALTHQEEPLNLQEEISSRDEWQKTAHLLEKQGKQEQADTIRSRI
LQTSEMPWQIITAEDARQWKQHILAGTADKTIQLQALEYSLIYSLFPLYNALYREDFKPTRQPRTKTLQL
LELKYFRPYSMNNPVAVLRDIERYGVDHRSPFNLTPLMSAARAGNIALVQLLLERGADPLLTGNDGLAAY
HQVLSAAVSTPRYAQQKSAQLYTLLKPESLSLQVEGRLIKLDNRQMAMFLVILMQALFHTHLGSALFFSE
AFSAARLAECVVHLPEALLPERRKRRSYISSQLSQHEVNSKNPYGKKLFLRLNHGQYILNPGLKIRKGDV
WRAVYELQSPEDLGHDLQTYLQDMSPELVDMLGGKKGFYERSEKSVGYWVGGIRRAAQKA
>gi|31983663|ref|NP_858368.1| putative carbohydrate transport protein [Shigella flexneri 2a str. 301]
MLNEGGILFKANHVPVLMYHHVSHCPGLVTLSPVTFRKQIKWLAENNWKTLSSDELEFFYRGGKLPRKSV
MLTFDDGYLDNWFQVYPLLKEFNLKAHIFLITGFIGNGPVRHSPGKEYSHRDCEHQIATGNADNVMLRWS
EVNEMLQSGLVEFHVHTHTHTRWDKKFSSREEQCKHLRQDLLSGREYLKEMTGKCSKHLCWPEGYYNKDY
IQVAEELGFYYLYTTERRMNAPAKGTTRIGRISTKERESCAWLKRRLFYYTTPFFSSLLAFHKGPRLPDD
>gi|31983662|ref|NP_858369.1| UDP-sugar hydrolase [Shigella flexneri 2a str. 301]
MNILFTESSPNIGGQELQAVAQMKALKKMGHSVLLVCRENSKIAFEASKLGIDITFALFRNSLHIPTAWR
LLGIVHGFQPNAIVCHSGHDSNIVGLVRLFTRKHPFRIIRQKTYLTRKTKVFSINHFCDEVIVPGTSMKT
HLEQEGCRTRVTVVPPGFDFQKLYVDSRNSLPPNVLSWLASRRGCPVIAQVGMLRPEKGHEFMLNLLFHL
KMNGRQFCWLIVGSGSPELREHLQYQIDSMGMHDDVFIADNVFPAAPVYRVASLVVLPSENESFGMVLAE
ASAFSVPVLASQIGGIPDVIQNNQTGTLLPAGNKHAWMCALNDFFNDPGRFYQMARQAKQDIEERFDINK
TALKILTLAKHK
>gi|31983528|ref|NP_858370.1| hypothetical protein CP0237 [Shigella flexneri 2a str. 301]
MFSVSNLSFIGFLKRIVFSSDSLPGKWEHRKFRFMYILRCAINPVASIRYYYELRSLQCIEDILAIQPTL
PARIHRPYLHKGGRAWSRGQYILEHYRFVQNLPEKYSEFLFPQKSVSLVQFIGKDGEDFDIQCSPSGFDR
EGELMLSLFFNKIVIARLTFSVILTQNGHTAFIGGLQGAPKNTGPDIIRCATRACYGLFPKRIIFEAFCA
LMKACNVSECLAVSEHSHVFRQLRYWYQKRKTFVAVYSDFWESVAGKTCGDWYKLPTQVVRKPLSNIASK
KRSEYRKRYALLDYIHETAIRSLDAYPVNSEHYDLN
>gi|31983572|ref|NP_858371.1| lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase [Shigella flexneri 2a str. 301]
MKKYKSEFIPEFKKNYLSPVYWFTWFVLGMIAGISMFPPSFRDPVLAKIGRWVGRLSRKARRRATINLSL
CFPEKSDTEREIIVDNMFATALQSIVMMAELAIRGPEKFQKRVFWKGLEILEEIRHNNRNVIFLVPHGWS
VDIPAMLLAAQGEKMAAMFHQQRNPVIDYVWNSVRRKFGGRLHSREDGIKPFIQSVRQGYWGYYLPDQDH
GPEYSEFADFFATYKATLPIIGRLMNISQAMIIPLFPVYDEKKHFLTIEVRPPMDACIASADNKMIARQM
NKTVEILVGSHPEQYIWVLKLLKTRKSNEADPYP
>gi|31983619|ref|NP_858372.1| IS630 orf [Shigella flexneri 2a str. 301]
MVVSAIASTPQLHRGDRVSDVARTLCCARSSVGRWINWFTQSGVEGLKSLPAGRARRWPFEHICTLLREL
VKHSPGDFGYQRSRWSTELLAIKINEITGCQLNAGTVRRWLPSVGIVWRRAAPTLRIRDPHKDEKMAAIH
KALDECSAEHPVFYEDEVDIHLHPKIGADWQLRGQQKRVVTPGQNEKYYLAGALHSGTGKVSYVGGNSKS
SALFISLLKRLKATYRRAKTITLIVDNYIIHKSRETQSWLKENPKFRGIYQPVYSPWVNHVERLWQALHD
TITRNHQCRSMWQLLKKVRHFMETVSPFPGGKHGLAKV
>gi|31983693|ref|NP_858375.1| IS600 ORF1 [Shigella flexneri 2a str. 301]
MSRKTQRYSKEFKAEAVRTVLENQLSISEDASRLFLPEGTLGQWVTAARKGLGTPGSRTLAELESEILQL
RKALNEARLERDILKKATAYFAQESLKNTR
>gi|31983762|ref|NP_858376.1| DNA transport protein [Shigella flexneri 2a str. 301]
MSVKLRLPQISESGEVVDMAAYEAWQQENHPDTWQQMQRREEVNINVHRERGEDVEPGDDF
>gi|31983534|ref|NP_858377.1| hypothetical protein CP0244 [Shigella flexneri 2a str. 301]
MNRSAPVFSSQAAHTFKFPGVISHNNQPPTAGMTCDHLIKWPDRASLTGKFCSYLAGVCGCSSVVIQNIN
AGNKSLDHSEITFRHLAFFCTIYQLHQGDRTDTHFPLVQVKTLPDAGGFVLYRKNADVGIEHKLQHQNDS
LSCMPGCSLLSIKSVLTLCPSNHSSHVSPAGVMILVRPTAITSTRFTFSGNATAFGSLTAWLRLLRNTVV
SIICLLMWICLVYIYCGIDTGICQRDIRL
>gi|31983571|ref|NP_858378.1| plasmid maintenance protein [Shigella flexneri 2a str. 301]
MLKFMLDTNICIFTIKNKPASVRERFNLNQGKMCISSVTLMELIYGAEKSQMPERNLAVIEGFVSRIDVL
DYDAAAATHTGQIRAELARQGRPVGPFDQMIAGHARSRGLIIVTNNTREFERVGGLRTEDWS
>gi|31983570|ref|NP_858379.1| plasmid maintenance protein [Shigella flexneri 2a str. 301]
METTVFLSNRSQAVRLPKAVALPENVKRVEVIAVGRTRIITPAGETWDEWFDGHSVSTDFMDNREQPGMQ
ERESF
>gi|31983763|ref|NP_858380.1| oriT nicking and unwinding protein [Shigella flexneri 2a str. 301]
MSKGYTFMMSIAQVRSAGSAGNYYTDKDNYYVLGSMGERWAGQGAEQLGLQGSVDKDVFTRLLEGRLPDG
ADLSRMQDGSNRHRPGYDLTFSAPKSISMMAMLGGDKRLIEAHNQAVDFAVRQVEASAST
>gi|31983764|ref|NP_858381.1| oriT nicking and unwinding protein [Shigella flexneri 2a str. 301]
MLTGNLVMALFNHDTSRDQEPQLHTHAVVTNVTQYNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREK
LKEQVEALGYETEVVGKHGMWEMPGVPVEAFSGRSQTIREAVGEDASLKSRDVAALDTRKSKQHVDPEVR
MAEWMQTLKETGFDIRAYRDAAEQRAYTRTQTPGPASQDGPDVQQAVTQAIAGLSERKVQFMYTDLLART
VGILPPENGVIERARAGIDEAISREQLIPLDREKGLFTFGIHMLDELSVRALSRDIMKQNRVTVHLEKSV
PRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNLKQDERLS
GELITGRRQLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTGTGSALMAMKDA
GVNTYRWQGGEQRPATIISEPDRNVGWPEILRPA
>gi|31983654|ref|NP_858382.1| oriT nicking and unwinding protein [Shigella flexneri 2a str. 301]
MKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGHPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWN
PETRSHDRYVTERVTAQSHSLTLRNAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVS
GGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMDNA
TLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKARAGETLLETAISLQKAGLHTPAQQAIHL
ALPVLESKNLAFSMVDLLTEAKSFAAEGTGFADLGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAE
KSILRHILEGKEAVTPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVN
MLPESERPRVVGLGPTHRAVGEMRSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDM
ARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVVIMKEIVRQTPELREAVYSLINRDVER
ALSGLERVKPSQVPRLEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRT
PEAREQTLIVTHLNEDRRVLNSMIHDAREKAGELGKVQVMVPVLNTANIRDGELRRLSTWENNPDALALV
DNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRIRFTKSDRERGYVANS
VWTVTAVSGDSVTLSDGQQTRVIRPGQERAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFE
SAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTARELRDVAAGRAV
LRQAGLAGGDSPARFIAPGRKYPQPYVALPAFDRNGKSAGIWLNPLTTDDGNGLRGFSGEGRVKGSGDAQ
FVALQGSRNGESLLADNMQDGVRIARDNPDSGVVVRIAGEGRPWNPGAITGGRVWGDIPDNSVQPGAGNG
EPVTAEVLAQRQAEEAIRRETERRADEIVRKMAENKPDLPDGKTEQAVREIAGQERDRAAITEREAALPE
SVLREPQRVREAVREVARENLLQERLQQMERDMVRDLQKEKTPGGD
>gi|56404032|ref|NP_858383.2| conjugal transfer pilus acetylation protein TraX [Shigella flexneri 2a str. 301]
MTTDNTNTTRNDSLAARTDTWLQSFLVWSPGQRDIIKTVALVLMVLDHINLIFQLKQEWMFLAGRGAFPL
FALVWGLNLSRHAHIRQPAINRLWGWGIIAQFAYYLAGFPWYEGNILFAFAVAAQVLTWCTTRSGWRTAA
AILLMALWGPLSGTSYGIAGLLMLAVSNRLYRAEDRAERLALVACLLAVIPALNLATSDAAAVAGLVMTV
LTVGLVLCAGKSLPRFWPGDFFPTFYACHLAVLGVLAL
>gi|31983591|ref|NP_858384.1| conjugal transfer fertility inhibition protein FinO [Shigella flexneri 2a str. 301]
MTEQKRPVLTLKRKTEGTAPVRSRKTIINVTTPPKWKVKKQKLAEKAAREAELAAKKAQARQALSIYLNL
PTLDEAVNTLKPWWPGLFDGDTPRLLACGIRDVLLEDVAQRNIPLSHKKLRRALKAITRSESYLCAMKAG
ACRYDTEGYVTEHISQEEEAYAGARLAKIRRQNRIKAELQAVLDEK
>gi|31983635|ref|NP_858385.1| hypothetical protein CP0252 [Shigella flexneri 2a str. 301]
MNGFRNSSRNGQVWRYQRAGGRAVILEVSGRWMEAAEAWRRAACVAPRTDWQQFARKRAEHCHRRCRGRV
>gi|31983765|ref|NP_858386.1| hypothetical protein CP0253 [Shigella flexneri 2a str. 301]
MLHYSGGLKYRWHLSDMENNMRKYIPLALFIFSWPVLSADIHGRVVRVLDGDTIEVMDSLKAVRIRLVNI
DAPEKKQDYGRWSTDMMKSLVAGKTVTVTY
>gi|31983690|ref|NP_858387.1| IS600 ORF2 [Shigella flexneri 2a str. 301]
MCQVFGVSRSGYYNWVQHEPSDRKQSDERLKLEIKVAHIRTRETYGTRRLQTELAENGIIVGRDRLACLR
KELRLRCKQKRKFRATTNPNHNLPVAPNLLNQTFAPTAPNQVWVADLTYVATQEGWLYLAGIKDVYTCEI
VGYAMGERMTKELTGKALFMALRSQRPPAGLIHHSDRGSQYCAYDYRVIQEQSGLKTSMSRKGNCYDNAP
MESFWGTLKNESLSHYRFNNRDEAISVIREYIEIFYNRQRRHSRLGNISPAAFREKYHQMAA
>gi|31983688|ref|NP_858388.1| IS600 ORF1 [Shigella flexneri 2a str. 301]
MSRKTQRYSKEFKAEAVRTVLENQLSISEGASRLSLPEGTLGQWVTAARKGLGTPGSRTVAELESEILQL
RKALNEARLERDILKKATAYFAQESLKNTR
>gi|31983766|ref|NP_858389.1| hypothetical protein CP0256 [Shigella flexneri 2a str. 301]
MNINQFMVRAGAAWVYEQYNTDPVLPVLQNEARQQKRGLWSDADPVPPWIWRHRK
>gi|31983661|ref|NP_858390.1| hypothetical protein CP0257 [Shigella flexneri 2a str. 301]
MKLIIFILIVLIIAALLIRIILRSVNQHSPLLMQLHAAGIRTGDAERILSSGEYWQRQKTLLTEREVSFM
KGLFRIVDMKRWYLCPQVRVADIVQLNGNIRPRSRQWWQLFRMVSQWHVDVVIVELRSFSIVAAVELDDA
SHLRPERRRRDILLEEVLRQAGIPLLRSHDARKLLQMTGEWLNTTGADQQSPEHRS
>gi|31983793|ref|NP_858391.1| replication protein [Shigella flexneri 2a str. 301]
MSQTENAVTSSLSQKRFVRRGKPMTDSEKQMAAVARKRLTHKEIKVFVKNPLKDLMVEYCEREGITQAQF
VEKIIKDELQRLDILK
>gi|31983794|ref|NP_858392.1| leader peptide RepL [Shigella flexneri 2a str. 301]
MPGKVQDFFLCSLLLRIVSAGWCD
>gi|56404033|ref|NP_858393.2| replication protein [Shigella flexneri 2a str. 301]
MTDLQQTYYRQVKNPNPVFTPREGARTLPFCGKLMEKAVGFTSRFDFAIHVAHARSLGLRRRMPPVLRRR
AIDALLQGLCFHYDPLANRVQCSITTLAIECGLATESAAGKLSITRATRALTFLAELGLITYQTEYDPLI
GCYIPTDITFTSALFAALDVSEEAVAAARRSRVEWENRQRKKQGLDTLGMDELMAKAWRFVRERFRSYQT
ELKSRGMKRARARRDADRQRQDIVTLVKRQLTREISEGRFTASREAVKREVERRVKERMILSRNRNYSRL
ATASP
>gi|31983785|ref|NP_858394.1| hypothetical protein CP0261 [Shigella flexneri 2a str. 301]
MAENGYGLAGLGMGKVKSVNQYRLTPGFGGFTPVSHVTTACRLPCRWRGIRIIQAAFNAFAKV
>gi|31983677|ref|NP_858395.1| IS1294 transposase [Shigella flexneri 2a str. 301]
MLSAFTPRPLKRLFTTNQCWTSFLDAGGLRDIEVEAVTKMLACGTRILGVKEYICDKPECPHVRYVTNSC
GSRACPSCGKKATDLWIATQLNRLPDCDWVHLVFTLPDTQWPVFESNRWLLNDVCRLAVENLLYAARKRG
QEPGIFCAIHTYGRRLNWHPHVHVSVTCGGLNKHGQWKKLSFLKDAMRSRWMWNMRQRLLKAWSEGLAMP
ESLSHITTESQRRSLVLKAGGKYWHVYMSKKTAGGRNTARYLGRYLKKPPIAASRLAHYNGGASLSFRYL
DHKTGETATETLTQRELVARLKQHIPEKFFKMVRYFGFLANRVCGEKLPQVYRALGMDKPEPVAKVCYAQ
MVKQFLSRDPFECVLCGSQMRFTGLKRGYRLAEQVLMHEPLARMRWCG
>gi|31983786|ref|NP_858396.1| IS1294 transposase [Shigella flexneri 2a str. 301]
MLTRKSIDTVLLSVGAEKLSQREWDWMKMLKPMDPPPAMVAASILERRGDTAALTRLQDTGG
>gi|31983767|ref|NP_858397.1| putative transposase [Shigella flexneri 2a str. 301]
MDEKKLKALAAELAKGLKTEADLNQFSRMQTKLTVETVLNAELTDHLGHEKSYIR
>gi|56404034|ref|NP_858398.2| invasion plasmid antigen, secreted by the Mxi-Spa secretion machinery [Shigella flexneri 2a str. 301]
MIKSTNIQAIGSGIMHQINNVYSLTPLSLPMELTPSCNEFYLKTWSEWEKNGTPGEQRNIAFNRLKICLQ
NQEAELNLSELDLKTLPDLPPQITTLEIRKNLLTHLPDLPPMLKVIHAQFNQLESLPALPETLEELNAGD
NKIKELPFLPENLTHLRVHNNRLHILPLLPPELKLLVVSGNRLDSIPPFPDKLEGLALANNFIEQLPELP
FSMNRAVLMNNNLTTLPESVLRLAQNAFVNVAGNPLSGHTMRTLQQITTGPDYSGPQIFFSMGNSATISA
PEHSLADAVTAWFPENKQSDVSQIWHAFEHEEHANTFSAFLDRLSDTVSARNTSGFREQVAAWLEKLSAS
AELRQQSFAVAADATESCEDRVALTWNNLRKTLLVHQASEGLFDNDTGALLSLGREMFRLEILEDIARDK
VRTLHFVDEIEVYLAFQTMLAEKLQLSTAVKEMRFYGVSGVTANDLRTAEAMVRSREENEFTDWFSLWGP
WHAVLKRTEADRWAQAEEQKYEMLENEYSQRVADRLKASGLSGDADAEREAGAQVMRETEQQIYRQLTDE
VLALRLSENGSNHIA
>gi|157042768|ref|YP_001449237.1| OspE1 [Shigella flexneri 2a str. 301]
MLTQTIFPCLPQKQENIILEVSNPVLLSSTVTTDGYTVFNKKAAIYELQIPAASRTKTLKFTATEMQWLT
KINEAGIDEKQSQRYSDF
>gi|56404035|ref|NP_858399.2| hypothetical protein CP0266 [Shigella flexneri 2a str. 301]
MSVKLRLPQLSSGEYLPGSLQDKILSDDCLEKEQMVVSAIASTPQASYHI
>gi|31983624|ref|NP_858400.1| IS600 ORF1 [Shigella flexneri 2a str. 301]
MSRKTQRYSTEFKAEAVKTVPENQLSISEGASRLSVPEGTLGQWVTAARKGLNTPGSRTVAELESEVMQL
RKALNEARLERDILKKATAYFARNPRPIQQCFKFTLLAFSHLFLGNTGECHDGALSE
>gi|31983618|ref|NP_858401.1| IS911 ORF1 [Shigella flexneri 2a str. 301]
MICSPQNNTGAPMKKRNFSAEFKRESAQLVVDQKYTVADAAKAMDVGLSTMTRWVKQLRDERQGKTPKAS
PITPEQIEIRELRKKLQRIEMENEILKKATALLMSDSLNSSR
>gi|31983685|ref|NP_858402.1| IS911 ORF2 [Shigella flexneri 2a str. 301]
MVTLCHVFGVHRSSYRYWKNRPEKPDGRRAVLRSQVLELHGISHGSAGARSIATMATRRGYQMGRWLAGR
LMKELGLVSCQQPTHRYKRGGHEHVAIPNYLERQFAVTEPNQVWCGDVTYIWTGKRWAYLAVVLDLFARK
PVGWAMSFSPDSRLTMKALEMAWETRGKPGGVMFHSDQGSHYTSRQFRQLLWRYQIRQSMSRRGNCWDNS
PMERFFRSLKNEWMPVVGYVSFSEAAHAITDYIVGYYSALRPHEYNGGLPPNESENRYWKNSNSVASFC
>gi|31983768|ref|NP_858403.1| IS3 ORF2 [Shigella flexneri 2a str. 301]
MECLHGEHFIYREIVRATVFNYIECNYNRWRRHRWCGGLSPEQFENQNLA
>gi|56404036|ref|NP_858404.2| outer membrane protease [Shigella flexneri 2a str. 301]
MKLKFFVLALCVPAIFTTHATTNYPLFIPDNISTDISLGSLSGKTKERVYHPKEGGRKISQLDWKYSNAT
IVRGGIDWKLIPKVSFGVSGWTTLGNQKASMVDKDWNNSNTPQVWTDQSWHPNTHLRDANEFELNLKGWL
LNNLDYRLGLIAGYQESRYSFNAMGGSYIYSENGGSRNKKGAHPSGERTIGYKQLFKIPYIGLTANYRHE
NFEFGAELKYSGWVLSSDTDKHYQTETIFKDEIKNQNYCSVAANIGYYVTPSAKFYIEGSRNYISNKKGD
TSLYEQSTNISGTIKNSASIEYIGFLTSAGIKYIF
>gi|31983769|ref|NP_858405.1| IS629 ORF1 [Shigella flexneri 2a str. 301]
MTKNTRFSPEVRQRAVRMVLESQGEYDSQWAAIFSHENVINSVNQFKKYTLYLRK
