>gi|56694929|ref|YP_165274.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Ruegeria pomeroyi DSS-3]
MKHSDFDIVVIGAGHAGAEAAHAAARMGMRTALVSLSERDIGVMSCNPAIGGLGKGHLVREIDALDGVMG
RVADKAGIQFRLLNRRKGPAVQGPRAQADRKLYRLAMQEEMRNRPGLTIVEGEVTDFRMQGDRVAGVVLA
DGSEIASQAVILTSGTFLRGIIHIGDVSRPGGRMGDRPSVPLAERLDGFALPMGRLKTGTPPRLDGRTID
WSILERQDGDDDPVLFSFLSKGAYARQIACGITHTNAQTHEIIRKNLSRSAMYGGHIEGVGPRYCPSIED
KIVRFADKDSHQIFLEPEGLEDHTVYPNGISTSLPVDVQEDYVRSIRGLEQVEILQPGYAIEYDYVDPRA
LTSQLSLPNVPGLYLAGQINGTTGYEEAAAQGMVAGLNAATAILGHEPVPFSRANSYIGVMIDDLTTRGV
AEPYRMFTSRAEFRLSLRADNADQRLTPLGLELGCVGDERRDVFARKAEKLATASALLDQSSFSPKEIAT
AGITISQDGNRRNGFAVLAFPDVRFDDLVPLIPELADTDAETRAQVERDALYANYIARQERDVEAMKRDE
ALVIPIDFNFSALDGLSNELKQKLTSARPENIAQAGRVEGMTPAALALILARLRRGDRARSA
>gi|56694930|ref|YP_165275.1| glucose-inhibited division protein B [Ruegeria pomeroyi DSS-3]
MMVPDANTLNVSRETFERLKIFADLVHKWNPRINLVSKRSLEDLWTRHIIDSIQVFRNAPKGDLWVDLGS
GGGFPGLICAILAAEEKPETQFICVESDQRKSAFLRSAARECGIACQVISERIEHLDPLDADILSARALT
DLTGLLGFAERHLKIGGTALFPKGAAWKKELQDAAKQWNFSYDAVTSLTEPQAVLLKITGVTRV
>gi|56694931|ref|YP_165276.1| chromosome partitioning protein ParA [Ruegeria pomeroyi DSS-3]
MSDLSRPAGPRIIAVANQKGGVGKTTTAINLAAALVESGQRVLVVDLDPQGNASTGLGVDERELTTYELL
VDDAPLNSVIQKTSIDGLSIVPATVDLSSADIELISNEKRSFLLHDALRQTAMDAYSWDYILIDCPPSLN
LLTVNAMVAAHSVLVPLQSEFFALEGLSQLMLTIREVRQAANPNLRIEGIVLTMYDRRNNLSQQVEKDAR
DNLGDLVFETKIPRNVRVSEAPSFAMPVLNYDPNSLGAMAYRDLAAELMKKHNKIAA
>gi|56694932|ref|YP_165277.1| chromosome partitioning protein parB [Ruegeria pomeroyi DSS-3]
MVSNKPRGLGRGLSALMADVTQPAEAAASEAARRPDRTVPIEKLRANPNQPRRTFTEDALQELAASIKEK
GVLQPLIVRPVDGDMYEIVAGERRWRAAQLAQLHQVPVLVRELDDTEVLEIAIIENIQRADLNAVEEAAG
YRQLMDKFGHTQEKLAEALGKSRSHIANLLRLLSLPDDVQTLVVEGKLSAGHARALITSDNPSELAKIVV
RDGLSVRATEALVKKQAEGDKPTATARPKSITADKDADTRALEKDLSAILAMKVAINHKPGTETGQVVLT
YENLDQLDDLCAKLSR
>gi|56694933|ref|YP_165278.1| hypothetical protein SPO0005 [Ruegeria pomeroyi DSS-3]
MQFIWAALGLVCVALALIGVALPLLPTVPFLLLAAFFFARSSERLHTWLVTHRLFGPMILDWQQSGAIRP
GAKKAATLSIAAVFGLSLVFAVPSHVLLIQAVVLSGVLIFIWTRPNG
>gi|56694934|ref|YP_165279.1| coproporphyrinogen III oxidase [Ruegeria pomeroyi DSS-3]
MADDWQHGGFGLYVHWPFCQAKCPYCDFNSHVAREIDQKAWVRAYVSELERCAAELPGRVLNTIFFGGGT
PSLMMPETVAAVIETVRRLWPTSNDMEITLEANPGSVEAGRFAAYRDGGVNRISMGVQALNDRDLHRLGR
IHSVAEARAAFDIARRCFERVSFDLIYARQDQTPEAWRAELNEALAMAVDHLSLYQLTIEDGTAFGDRYA
RGKLRGLPADDDAADMYLITQEVCATHGLPAYEVSNHARPGSESRHNLIYWRYGDYVGIGPGAHGRITVD
GQRFATESPLNPGAWLGAVAKGSGELSRVALSLQDQADEYLMMGLRIAEGLDIHRYEALSPQPLNRNRLA
HLTELGMIEIEGTRLKATAQGRAVLNAVILDLMSE
>gi|56694935|ref|YP_165280.1| putative deoxyribonucleotide triphosphate pyrophosphatase [Ruegeria pomeroyi DSS-3]
MTRAFDGDTLLIATHNKGKLEEMAHLLQPFGVKVVGAAEMNLPEPEETEDTFVGNARIKAHAAARATGLP
ALSDDSGITIDALDGAPGVYTADWAETGNGRDFLMAMTRAHDALEAKSAPHPRLAQFRCTLVLAWPDGHD
EVFEGVAPGHLVWPIRGAAGFGYDPMFVPEGYDVTFAEMDRWEKNKISHRARAVEKFVKGCFGG
>gi|56694936|ref|YP_165281.1| ribonuclease PH [Ruegeria pomeroyi DSS-3]
MRPSGRDLSEMRPVSIETGFTKHAEGSCLIKMGDTHVLCTATIEDRVPPFIKGSGLGWVTAEYGMLPRAT
NTRMRREAASGKQGGRTVEIQRLIGRALRAGVDRVALGERQITVDCDVIQADGGTRCASITGGWVALRLA
VNKLMKAGDVISDPLVDPVAAVSCGIYAGQPVLDLDYPEDSEAGVDGNFIMTGSGKLIEVQMSAEGSVFN
RAQLDQLLGLAEKGVGELVAAQMAATA
>gi|56694937|ref|YP_165282.1| heat-inducible transcription repressor [Ruegeria pomeroyi DSS-3]
MSDARKILDDLNDRSREVFRLIVESYLDSGEPVGSRTLTRTLSEKVSAATVRNVMQDLEFLGLLDSPHIS
AGRIPTQMGLRMFVDGLLEVADLSLDDRAKLDATLGTNAGDVGGTLDRISATLSRVTQGASLVLTPKHEA
EIRHIEFVSLAQDRALVVLVFSDGHVENRLFAPPPGQTPSSMREAANFLNALIEGKTLSEVRRLMQTEIG
ARQQEIDQLARQMVESGLAVWDREGEEAARLIVRGRANLLEGTGQEQELERIRVLFDDLERKRDIAEFLQ
LTEDGEGVRIFIGSENKLFSLSGSSLVVSPYMNADRKVIGAVGVIGPTRLNYGRIVPIVDYTAQLVGRLI
SDRS
>gi|56694938|ref|YP_165283.1| co-chaperone GrpE [Ruegeria pomeroyi DSS-3]
MAKPNNEEFLDDIATAEAEELAEEMAEISDEAAELDTLRAERDAFKDKFMRALADAENVRKRGERARREA
EQYGGSKLARDMLPVYDNMKRALETVTDEQRAVSGALIEGIELTMRALLDVFGKHGIQVLSPQVGDRFDP
QMHEAMFEAPVPGTKAGDIIQVSAEGFMLHDRLLRPAQVGVSSMPAG
>gi|56694939|ref|YP_165284.1| DNA mismatch repair protein MutS [Ruegeria pomeroyi DSS-3]
MTTVTPMMAQYLEIKEAYADALLFYRMGDFYEMFFDDAVAAAEALDIALTKRGKHEGEDIPMCGVPVHAA
EGYLLTLIRKGFRVAVCEQMESPAEAKKRGSKSVVRRDVVRLVTPGTLTEDALLEARRHNFLVAYAEVRS
GAALAWADISTGDFHVMPVTRPRLSPELARLAPSELLVVDEPVFQQLRPLADDHRIPLTPLGKASFDSMA
AEKRLCELYKVGSLEGFGTFARAELSAMGALIDYLDITQKGKLPLLQPPVQEAEDRVMQIDAATRRNLEL
TRSLSGERGGSLLSVIDRTVTPGGARLLEQRLGSPSRNLDVIHARLSALDFCIDHSTLAADLRAALRKTP
DLDRALSRLALDRGGPRDLAAIRNGLGQAEAIAALCDGLELPGLIAGACADLNGFDELLGLLDTALVAEP
PLLARDGGFIAPGYDSDLDEARELRDKGRGVIAGMQQKYAEHTGIASLKIKHNNVLGYFIETTATHAAKM
LNPPLSETYIHRQTTANQVRFTTVELSELETRILNAGNHALEIEKRLYSSLSGAVLEQAARLNIAARGLA
ELDLATALADLARAENWCRPSVDPSRAFAIEGGRHPVVEHALRRQGGDPFVANDCDLSADKGAAIRLLTG
PNMAGKSTYLRQNALITLLAQIGSYVPADSAHIGVVSQLFSRVGASDDLARGRSTFMVEMVETAAILNQA
DDHALVILDEIGRGTATYDGLSIAWATLEHLHATNRCRALFATHYHELTALAATLDGVENLTVAVKEWEG
EVIFLHEVRKGAADRSYGVQVAQLAGLPPSVVARARVVLDQLEKSEREGGKQKALIDDLPLFSAAPPLPP
PAPKTSPADAMLKEIHPDELTPRQALEMLYKLKEAAR
>gi|56694940|ref|YP_165285.1| malic enzyme [Ruegeria pomeroyi DSS-3]
MPKAKITNEEALAFHLEPTPGKWEVQATVPMTTQRDLSLAYSPGVAVPCEAIAADPGLAYDYTNKGNLVA
VISNGTAVLGLGNLGALGGKPVMEGKAVLFKRFADVNSIDIELDTEDPDEFCRAVRLMGPTFGGINLEDI
KAPECFIIEQRLKEEMDIPVFHDDQHGTAVICAAGLINALHISGKKIEDVKIVLNGAGAAGIACIELLKT
MGARHENCIVCDTKGVIFQGRTEGMNQWKSAHAIKTELRSLEEAMKGADVFLGVSVKGAVTQEMVQSMAD
NPVIFAMANPDPEITPEEAHEVRPDAIVATGRSDYPNQVNNVLGFPYLFRGALDIHARAINDEMKIACAH
ALAALAREDVPDEVAMAYGKSLAFGRDYIIPTPFDPRLIHRIPPAVARAGMDTGAARRPIIDMDAYELGL
KSRMDPTASILRGINARARKAQSRMIFAEGDDPRVLRAAVTYQRSGYGKALVVGRHDDVKAKLEAAGLGD
AVRELEVVNAANTTHLETYKEFLYSRLQRKGFDNKDVHRLAARDRHVFSALMLAHGHGDGLVTGATRKSA
HVLHQISHVFDADAAHGAAGITALLHKGKIVLIGDTLVHEWPDEHDLATIAERAADVARHMGLEPRVAFV
SFSTFGYPISERTEKLTKAPKVLEARGVSFEFEGEMTVDVALNPRSKEAYPFSRLTGPANILIVPARHSA
SISTKLMQEMAGATVIGPILTGVDKPIQICSTVSTANDILNMAVLASAEIG
>gi|56694941|ref|YP_165286.1| ribokinase [Ruegeria pomeroyi DSS-3]
MAIWNLGSINADMVYAVPHLPGPGETLAASGLERFLGGKGANMSVAAARAGSQVRHIGAVGPEGRWAIDR
LTEYGVDTRHIATLEAPTGHAIIAVEPGGENLIVLLPGANRAISPERVGSVLLDAAPGDLLVMQNETSAQ
VEAARLGRERGLTVCYAAAPFDAQAVRDVLPWLDFLILNAVEAEQLQEATGLTPDQLPVSHVIVTLGSKG
ARHFDTDKGISTEYPAYRVKAVDTTGAGDTFTGYVLSGMDRGLPMPQAITQAMRAAALMVMRHGTADVIP
DLKEVLAARF
>gi|56694942|ref|YP_165287.1| methionine-S-sulfoxide reductase [Ruegeria pomeroyi DSS-3]
MFPIQTLKPIALIAAMALATILQGGKAEAAETQTLTVAGGCFWCVEADFEKVPGVLGAVSGYTGGTLDNP
TYKQVTRGGTGHFEAVQILFDPDQVSRERLLHMFFRSVDPTDAGGQFCDRGDSYRTAIFVSNKVESALAS
QAKANAEAELGQTVVTPILTAGRFYPAEAYHQDYAKGEKLVLTRFGPKRQQEAYKLYRKSCGRDARVKQL
WGDAAPFAGS
>gi|56694943|ref|YP_165288.1| hypothetical protein SPO0015 [Ruegeria pomeroyi DSS-3]
MEPAGQGVSVRPKPAIGEQNMKIAMWSGPRNLSTAMMYAFGARTDCAVIDEPFYAAYLAMTGLHHPMREE
VLAAQSQDPGQVAAMLSGPNPGARPFWYQKHMTQHMIPGIPRDWMRSVCNVFLIRHPARVIASYAEKREN
PTLEDIGFRQQAELFDEVSGWGGDPLVIDSHDIREDPARMLERLCDRIGVPWSPHMLSWPKGGHKDDGVW
ARHWYGAVWNSTGFAGPEGDLPEVPEALQPVLQAAMPFYERMRAVKI
>gi|56694944|ref|YP_165289.1| sterol carrier family protein [Ruegeria pomeroyi DSS-3]
MLQDIADKMQTELAGKSFDGSLKFDCGDDGVIVLADNTASTQDRDTDCTIRLSQDNLVKLLTGKLNPMTG
VMMGKLKISGNMGVAMKLGQLLG
>gi|56694945|ref|YP_165290.1| hypothetical protein SPO0017 [Ruegeria pomeroyi DSS-3]
MIGEDEFDDDDELEMFVEAQDTVWPDVLRELTLGQKTSHWMWFVFPQLAELGQSHMAQLYGIGDLDEAAA
YLAHPALRARLIEVSRLMLTHAGKRPDDILGSIDAKKLRSSMTLFAAVPDAPGEFRAVLEAFYDGSPCPL
TLRALGG
>gi|56694946|ref|YP_165291.1| argininosuccinate synthase [Ruegeria pomeroyi DSS-3]
MSAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQGEELEPARKKAELLGIKPENIHIEDVREE
FVRDFVFPMFRANAVYEGLYLLGTSIARPLISKRLVEIAAEHGADAVAHGATGKGNDQVRFELSAYALNP
EIRVIAPWRLWDLTSRTRLLEFAEAHQIPISKDKRGEAPFSVDANLLHTSSEGKVLEDPGVEAPDYVAQR
IVAVEDAPDTPEFIEVTFEKGDAVAINGEAMSPATILTRLNELGGKHGIGLLDFVENRFVGMKSRGVYET
PGGTILLEAHRGIEQITLDSGAGHLKDSIMPRYAELIYNGFWFSPEREMLQALIDKSQEHVTGTVRLKLY
KGSARTVARWSDHSLYSEAHVTFEEDAGAYDQQDAKGFIQLNALRLKLLATRNRRVAGK
>gi|56694947|ref|YP_165292.1| hypothetical protein SPO0019 [Ruegeria pomeroyi DSS-3]
MKQQSATQVMVEGCFKMLGWRIFLYSIRMVLRNWRHALRLALVPAILGSVAMMTIAWVMQSGPAFEQFFG
AGLNDLDKTEMTRQHTLSSLLVLVPQAVASLWIVITWHRFILLEEAQDGWVPPLRPGRTLAYFALSVGIV
LIFAAVAFPVVYATVVLAAALGLRGMAVALTLAVLLLLSPLSQRALLVLPASAIGQPLSFGDALTLTRDH
YWTMLIVAVSGSAMQHGLSTVLSFVGGTSTVGPVAALFLTLLLQPLLWASVLTTLYGVFVEKRPLG
>gi|56694948|ref|YP_165293.1| threonine dehydratase [Ruegeria pomeroyi DSS-3]
MSDFMTRARAAEQAMREVFPATPLQRNDHLSARYGADIWLKREDLSPVRSYKIRGAFNAMRKQPGQGLFV
CASAGNHAQGVAFMCRHMGVRGVIFMPVTTPQQKIQKTRMFGGDQVEIHLTGDYFDQTLAAAQAWCAQEG
GHFLSPFDDADVIEGQASLAVEIEEQLGGVPDHVVLPVGGGGMSAGVATWFGDRSHCIFVEPEGGACLRA
ALAAGHPVKLDHVDNFVDGAAVGRIGEKTFELLKSRHMSDVLVMPEDRICTTIIEMLNVEGIVLEPAGAL
SVEAVADVQSFVRGKTVVCVTSGGNFDFERLPEVKERAQRYLGVKKYFLLRLPQRPGALKEFLNILGPDD
DIARFEYMKKSARNFGSVLIGIETARPENFERLYARLDEAGFTYTDITRNETLAQFVI
>gi|56694949|ref|YP_165294.1| Hpt domain-containing protein [Ruegeria pomeroyi DSS-3]
MGQRERRCAMIHWPRVTQLREEVGAEDFEEVVDLFLEEVEEVITRLRQAPDRSLLEKDLHFLKGSALSLG
FQSFSALCQDGERQSAAGHADTVDLDAIINSFEASKSVFQSELPGHI
>gi|56694950|ref|YP_165295.1| response regulator [Ruegeria pomeroyi DSS-3]
MLTGTCLAWAVSLALVKSGQTTVLHGREMEAQTDMEPGAIRRVLVVDDSRLQRRILSSSLKKWGFEVIEA
ESGEEAMEICARAMPDLVLSDWVMPGMSGVDFCEAFRQLNSDRYCYFILLTSKSEKNEVAQGLDAGADDF
LIKPVSSDELRARISAGDRVIGMQRELSAKNEVIEQALDDLKRAHDAIDKDLIQARKIQESLVPDFSQDF
GSSRISLLLKPCGHIGGDLVGMFSPGPNRVGFYSIDVSGHGITSAMMTARLGGYLSSRYFDQNVAMEKRF
NKFFALRQPQDVAETLNSRLIADTGIEEYFTMVYAIMDLRSGMLRMVQAGHPHPLLLRRDGTAEFIGEGG
VPIGLLPGVPFTQVEVQMEVGDRLLLYSDGFTECRLANGEMLEPEGLLALVNECNPEQGGQEFLDDLFWR
LTQVMSPEHGLEDDVSATFFEFNGP
>gi|56694951|ref|YP_165296.1| NUDIX family hydrolase [Ruegeria pomeroyi DSS-3]
MIRRFGESPEPGRRYTRRVGAYALLPRGSDLLLTSQYDPDPDLQLPGGGIDPGESPVAALHREVYEETGW
LIAAPRRIGAFRRFAYMPEYNLWAEKICLIYRARPVRRIGPPTEPDHAALWMPAHSAAQLLGNAGDRHFA
ARHLARITAR
>gi|56694952|ref|YP_165297.1| chaperonin, 33 kDa [Ruegeria pomeroyi DSS-3]
MTLGTKIAWDDTVLPFQLDLPDMRGRVARLDGVLDGILKQHDYPTVVEALVAEMALLTALIGQTIGLRWK
LSLQVQSKGAVRMIATDYYAPRAEGEPARIRAYAGFDADRLTDGAPFDQVGEGYFAILIDQGKGTQPYQG
ITPLAGGSLSACAEAYFAQSEQLPTRFQLRFGKSTEPGVPEHWRAGGVMLQHMPKASPFAAGGPGTGDIL
TAADLVDGAEGENWNRVNILLDTVEDLELIGPALPPTDLLVRLFHEEQPRVYDAQSVRFGCTCSEERVRQ
SLSIYSVKDIGHMTTDEGTVTADCQFCGAHYVLDPASVGFEADQGD
>gi|56694953|ref|YP_165298.1| NUDIX family hydrolase [Ruegeria pomeroyi DSS-3]
MAALARTGPGSSDFDLNPGTILPEGRRLRPAGVLVPVTLAHGAPRVILTKRSSALKHHPGQIAFPGGKQD
EGDADVIAAALREAEEEIGLTRTLPQVLGTLPAHETVTAFTVTPVVAVVERTFDVRPEPGEVEEVFSVPL
AHLMRPENYSVQSRRWRGQRRHYFTVPFGPYYIWGATARMLRGLAERMQQ
>gi|56694954|ref|YP_165299.1| polyA polymerase family protein [Ruegeria pomeroyi DSS-3]
MTRIDEAWLTEPATQQVCRALTEGGAQALFVGGCVRNALLGAPVSDIDITTDAHPERVMALAAAAGIKAV
PTGIAHGTVTLVANSIPHEVTTFRRDVETDGRRAVVAFSDSIHEDAARRDFTMNALYARPDGTVLDPLDG
LPDLQARRVRFIGDATDRIREDYLRSLRYFRFHAWYGDAEAGFDAEALAAIAGNLDGLSRLSRERVGAEM
LKLFAAPDPAPSVAAMRAAGVLAQLLPGADDRALAPLVHLEDGLGADPIRRLAALGDGEALASLRLSKAQ
MALLDTLRRAALGTAGAGELGHELGVEAARDALLLRAALLEQPLDPHAPAAIARGAAAVFPVTARDLMPA
YSGPALGARLATLKARWIASDFSLSRAALLVDKD
>gi|56694955|ref|YP_165300.1| ABC transporter, transmembrane ATP-binding protein [Ruegeria pomeroyi DSS-3]
MFRFFENLVDPFVAYDETDTPPTRLWPFMLDYSQPFLRVFVWTALLSIIVAGVEIGLIYYMGRVVDVLNG
EPAEVWARYGTEFIVLALFVLLIRPALHVADVLLLNNAILPNFGTLIRWRAHKHVLRQSVGWFENDFAGR
IANRIMQTPPAAGEVIFQVFDAISFSLAYLLGAAILLMAADIRLLLPLLIWFALYALLVRWTIQRVGPAS
QAASDARSTVTGRVVDSYTNIHSVKMFAHDDRELTYAREAIEETRRTFQVEMRIFTIMDVVLVTLNGLLI
VGVVGWAIALWMQGQASVGLVAAASALTLRLNAMTGWIMWALTSFFRQLGVVAEGMETIAQPIDLVDAPD
ARPLELSEGRIELQQLSHHYGRGAGGLDQLDLTIAPGEKIGLIGRSGAGKSTLVKLLLRFYDPDSGRILI
DGQDIARVTQNSLRSHIGMVQQDSALLHRSVRDNLLYGRPDASEDEMIAAAKQAEAHDFILDLEDPQGRR
GYDAHVGERGVKLSGGQRQRVTLARVILKNAPILLLDEATSALDSEVEAAIQDTLYGMMEGKTVIAIAHR
LSTIAQMDRILVLDQGRIVEEGDHADLLAQGGLYAQFWARQSGGFLNTEAAE
>gi|56694956|ref|YP_165301.1| ABC transporter, transmembrane ATP-binding protein [Ruegeria pomeroyi DSS-3]
MRFADLIDPFRDTDTPPPQRLGAFIRWALSGAWPVLFVAALFSALAGMFEAITAWILGQVVDRAVELGPE
GFFEGTNLATILVAVGFFVLIRPVAFGLSAFSNNYIVMPNIPPLVLAKLNRWTLGQSVGFFDDDFAGRIA
QKQMQTASALSSVVSETISAIVFALASLIGSLALLGSIHPLVMLPFAVWLCGYFLLIRWYLPRVRKRSAA
RAGARAMVSGQVVDTITNIKTVKLFAHAEAEDVTARNAMADLRERSLDFGWLSASFRFFLMLLAGVLPVI
LLGSALILWRAGDASAGDVVVAGSVSIRIAQMSGWVSFTLMSLYANLGEVQNGMNSLARAERIEDVADAR
PLVAGAGKIDFEDVGFAYGRKSGGVDALSLTVAPGEKLGIVGASGAGKSTLVSLLLRLYEAENGQIRIDG
QDITTVTQDSLRRQIGLVTQETAMFNRSARENILYGRPNASEAELIAAAQKAEAHDFILDLADAKGRTGY
DAHLGERGVKLSGGQRQRIALARAILKDAPILVLDEATSALDSEVEASIQTALHRVMEGKTVLAIAHRLS
TLSEMDRIVVLDRGRIVESGTHEALLARDGLYARFWHRQSGGFIRTQAAE
>gi|56694957|ref|YP_165302.1| 23S rRNA (Uracil-5-)-methyltransferase rumA [Ruegeria pomeroyi DSS-3]
MPLYQAAMTQEITITRLGHQGDGIAPGPVYVPRSLPGEVVSGTPEGDRLADMRVVTPSPHRVAPPCRHYR
ACGGCQLQHASDGFVAEWKQEVVRAALAAQGIEAVMRPVHTSPPQSRRRATIAVRRTKKGALAGFHGRAS
DVITEIPDCHLLDPALLAAIPMAEALAMLGGSRKGVMAVTLTLSVAGLDVAVRGGKPLDGPLEVALGQLA
EVQGLARLAWEDEVIAMRHPPAQNFGKAAVVPPPGAFLQATRDGEQALLAAVRETIAGARRVADLFAGCG
TFALPLAETAEVHAVEGESAMTAALDRGWRRAQGLKRVTTEARDLFRRPLLPDELAAFDAVVLDPPRAGA
EAQVAELARAKPPVIAYVSCNPVTFARDAKTLVQAGYSLNWVQVVDQFRWSAHVELAAAFSLAHIGG
>gi|56694958|ref|YP_165303.1| voltage-gated sodium channel [Ruegeria pomeroyi DSS-3]
MQRMQAFIDRPGFGRFITAVIMLNAVVLGMETSPYLMERWGGLILAADRICLGIFIVEIALKLTAQRQRF
FLNGWNLFDFVIVGIALIPAAGGLSVLRALRILRVLRVISVAPRLRRVVEGFITALPGMASVFLLMTIIF
YIGAVIATKLFAASFPDWFGDLGLSAYTLFQIMTLESWSMGIVRPVMQVYPYAWLFFVPFIMITTFAVVN
LLVGLIVNSMQDAHHAEDGERTDAYRDEVLARLEQIDQRLNALGETKK
>gi|56694959|ref|YP_165304.1| ErfK/YbiS/YcfS/YnhG family protein [Ruegeria pomeroyi DSS-3]
MRLVKPKSDFARPRFRGIPGTIEKKNEAVIMDRRHFGLGAAAALGLSACGSQDSKFRRYYGPAVTSIVIN
KGARKMYLLNNEKVLKEYKVELGFAPAGHKQFEGDGKTPEGTYLIDRRNPNSAFHLSLGISYPNSRDVAY
AQAMGKKPGGEIFIHGEPNGLRDRKKAKKQPDWTAGCIAVKNDEIEEIYAMVRDGTVITLRA
>gi|56694960|ref|YP_165305.1| hypothetical protein SPO0032 [Ruegeria pomeroyi DSS-3]
MSECTRRKAMASIAPCETPIKAPRLRLFGWISFLRQPKVSEHATLEAELIRLAETAPHLLADIGFLVDHR
RSTSARTVWVSPGSGLIFEHPGSPAVRRAG
>gi|56694961|ref|YP_165306.1| LysR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MRLPPLNALRAFEAAARHNGYIAAAEELCVTRGAVSRHIKLLEDHLGVTLFHRNHRGVELTAAGRQLLPV
LTETFARIAREAEQISAMTRDVRIICPPALSIRWLFPRLEEFQAAHPDIRVRLTTEFYGAKGFDDTEHDL
GVSVEHVSGRGAGIASMPLFPMVLSPACSPALLRQRPLSAPADLARMTLLHESPQRRDWAHWLSSFGVRG
VDAGSGPTFPNLDMAARAATMGAGVVMADLALCQEELRAGTLVLPFPEMTCTTPQGGYVLLGARARWDEP
HLRAFRDWAASSSADLVACMGA
>gi|56694962|ref|YP_165307.1| hypothetical protein SPO0034 [Ruegeria pomeroyi DSS-3]
MSSPFDYFVVFAEMRTGSNFLEANLNALDGVACVGEAFNPHFIGYPNKTEILEVSQDMRDADPQCLIDAV
RDARGVLAGFRFFHDHDPRVLDLVLSDPRCAKIILTRNPLDSYVSWKIAKETGQWKLTNIKRRKEAQARF
DAEEFARHVEALQDFQVFLLNSLQRSGQTPFYVAYEDLQDLSVMNGLAQWLGVSARLEQLDDSLKRQNPS
PVTSKVVNAGEMVEALSGLDRFNLTRTPNFEPRRGPAVPTYVTGAVTPLIYLPVRGGPEDEVRRWMADLD
GVVDAALGTGLNQKQVRGWLKGNEGHRAFTVLRHPLARAHSAFCHRILNKGPGCFTKIRNTLRRQFSLPI
PEGTPGLDYGRADHRAAFEAFLEFVRMNLAGQTAIRIDGSWCSQAQALSSFAEFVSPDLILREDEIATDL
PSLARRFGHAEPPEPPRAAPDTPIPLSDIYDDALEALAADVYQRDYIVFGFGKWAGGQA
>gi|56694963|ref|YP_165308.1| core-2/I-branching enzyme family protein [Ruegeria pomeroyi DSS-3]
MLVHTALDRAQQVAQHWTASGCPVVIHVDRKVSRKTFKAFHDACVKDPLIRFSTRHRCEWGTWGIVAASQ
AASEQMLAEFADVRHVYLASGSCLPLRPVQELIDYLAARPRTDFIESATTADVPWTVGGLDQERFTLRFP
FSWKKHRYLFDKYVNLQRRLGFKRRIPAGLVPHMGSQWWCLTRHTLSAILEDPERTVYDAYFRKVWIPDE
SYFQTLARQFSANIESRSLTLSKFDFQGKPHIFYDDHLQLLRRSDCFVARKIWPRAERLYQAFLTDQAGA
MKRTEPNPGKIDRIFAKAVERRTRGRDGLYMQSRFPRHGNENGLTSNPYSVFQGFTELFEDFEPWLAKAT
GTRVHGHLFGPERAEFAGGERLVNGALSDCALLRDYNPTSFLTSLIWNTRGERQCFQFGPADNQKIDWLL
ARDPNAQISVITGAWAVPLFKSNRNFADLRKEAARLQRIESKHLEILRSVWTKARVRIWTMAEFVEAPME
PIQTIVDEIGQSSPRRLTEAPTMVDLTGFGQFLQNLKNQGMHPYLMGDFPVEPAPINNPKPTRKPYLVR
>gi|56694964|ref|YP_165309.1| hypothetical protein SPO0036 [Ruegeria pomeroyi DSS-3]
MDSSVSLWDSYRMRVRRKRRLLRCIRKSRELRAVQNNTAAIRPSDVLLVSTVRNEKIRLPYFLRYYRELG
IDHFLIVDNDSTDGTLDYLGGQSDVSVWHTTHSYKSATFGVDWMNWLKRSYAHDHWVLVVDPDEFFIYPF
CDTRPIQALTDWLDNSSIRSFSAMLIDVYPKGRIDDVPYVEGQNPLEIANWFDSGNYMIKKNPEYGNLWI
QGGPRSRVFFPDNPKKAPALNKTPLVKWNRRYAYVSSTHALLPRGLNQVYDEWGGEKASGALLHTKFLDT
FTVKAAEELTRRQHYSNSVEYKAYADRVQDQPDLWCKWSEKYINWRQLEILGLMSKGNWA
>gi|56694965|ref|YP_165310.1| hypothetical protein SPO0037 [Ruegeria pomeroyi DSS-3]
MTSSPAPPLSPIGWADAYRLRWKRQRLLWRAFRSRRALTALADRTAAIRPGQVLAVTTLRNEVLRLPWFL
DYYRTLGVGHFLMVDNGSDDGSVEMLAAQPDVSLWQTGASYRDARFGLDWMTWLQIRHAHGHWCLMVDVD
ELLIYAHHDRRDLHALTGWLERQGRNCFGAHMLDLYPKGPVAAQTHAPGEDPLDILHWFDAAPYRAQRQQ
PLGNLWVQGGARERMFFADDPRRSPTLNKIPLIRWDRRYAYVNSCHSALPRQLNAVYGGPGDSAPSGVLL
HTKFLPDIVSRSAEEKTRQQHFHTPADFDHYYDDLTASPDFWTPSSTRFTGWRQLHDLGLLSPGGWEEG
>gi|56694966|ref|YP_165311.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Ruegeria pomeroyi DSS-3]
MSVLIAIPARYASTRYPGKPLVSLTGASGTEMTLIERSWRAAMAVSGADRVVVATDDDRIRAVAEGFGAE
VVMTSSDCVNGTERCAEAHAVLGGGFDIVVNLQGDAPLTPHWFVEDLIAGLRAAPEADIATPVLRCDGMA
LNGFLNDRKHGRVGGTTAVFAADRSALYFSKEVIPFTSQIYADDAPTPVFHHVGVYAYRPGALADYPTWP
MGPLETLEGLEQLRFMENGRKVLCVEVEARGRQFWELNNPEDVARIEEMMAAMGLD
>gi|56694967|ref|YP_165312.1| 3'(2'),5'-bisphosphate nucleotidase [Ruegeria pomeroyi DSS-3]
MTYEELIPVIRRLALEAGDVIMSIYNADDFGVKVKSDSSPVTEADEAADALISAGLRAAFPDILLVTEEQ
AASHSQTGDTFLIVDPLDGTKEFINRRGDFTVNIALVENGTPTRGVVYAPAKGRMFYTLADGSSVEETGG
LDKETPGDLSPIRVAEADNAALLVVASKSHRDQATEDYIGKYAVKDSKSAGSSLKFCLVATGEADLYPRV
GRTMEWDTAAGHAVLAGAGGKVVRFDNHQPLTYGKDGYANPFFIAYAPSVTLKEA
>gi|56694968|ref|YP_165313.1| ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MFRYRQHKSLLSGAITMAELIFHNVVRGVRQGHSNAYAALGKNMMQILVFVLVFYMMFSMLGLRGSAIRG
DFLLYIMSGIFLFMVHIKTVGAVAGAEGPNSAMMKHAPMNTIIAILSAALGSLYTQLLTLFLILFGYHVA
FKPVEIADPAGAFGMLMLAWFTGCAVGLVFLSIKPWAPMLVGVMTTLYQRANMIASGKMFVANTLPGYML
AMFDWNPLFHAIDQCRGFVFRNYFPHNSNWHYSLWLGIILIMIGLMGEFYTRRHVSASWYARR
>gi|56694969|ref|YP_165314.1| hypothetical protein SPO0041 [Ruegeria pomeroyi DSS-3]
MRWLVALLLVLAAPLAADPVPALFDVTGVAADDVLNVREDPSAGSEVIGTLAPDAVGVEVVDLTFGGDWG
RVNVNETSGWVSMRYMQQQPESDGVWMTPRFTCSGTEPFWSLTVEQGVGARFQIMGEAEQALPAGLLRPG
AGLIDRFALPLGHNLAILRQMQCHDGMSDRAYGLDVGLMLNGSLYAGCCTLLPN
>gi|56694970|ref|YP_165315.1| alkylated DNA repair protein, putative [Ruegeria pomeroyi DSS-3]
MLNLRGVEIRKGALDGPAQARLIEALRPVLKAAPLFTPTMPNGKPLSVRMTSAGSLGWVTDKGGYRYQPT
HPKGMAWPAIPPEVLDLWHGVTGQDRAPDCCLINYYGEGARMGLHQDRDEADLTWPVVSLSLGDDALFRI
GNTSRGGKTESVWLNSGDVVVMGGPARLIYHGIDRIRFGSSRLLPKGGRLNLTLRVAG
>gi|56694971|ref|YP_165316.1| molecular chaperone DnaK [Ruegeria pomeroyi DSS-3]
MGKVIGIDLGTTNSCVAIMDGAQPKVIENSEGARTTPSIVAFTDEERLVGQPAKRQAVTNPSNTIFGVKR
LIGRRVDDAEVTKDKKMVPFTIVNGGNGDAWVEAKGEKYSPSQISAVILGKMKETAESYLGEEVTQAVIT
VPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKKNSQTIAVYDLGGGTFDVTILEIDDGLF
EVKSTNGDTFLGGEDFDMRIVNYLADEFKKEHGVDLSGDKMALQRLKEAAEKAKIELSSTTQTEINQPFI
SMGANGQPLHLVMKLTRAKLESLVGDLIKKSMDPCKAALKDAGISPSDVDEVVLVGGMTRMPKVFEEVTK
FFGKEPHKGVNPDEVVAMGAAIQAGVLQGDVKDVVLLDVTPLSLGIETLGGVFTRLIDRNTTIPTKKSQV
FSTAEDNQNAVTIRVFQGEREMAADNKILGQFNLEDIPPAPRGMPQIEVTFDIDANGIVSVSAKDKGTGK
EHKITIQASGGLSDEDIEKMVKDAEENAEADKARKELVEARNQAESLIHSTEKSVEEHGDKVDPTTVEAI
ELAIAALKDDLDKDGVSAEKIKSGLQNVTEAAMKLGEAIYKAQSEGGDDEPAAADARPSDDDIVDAEFED
LGEDKRK
>gi|56694972|ref|YP_165317.1| chaperone protein DnaJ [Ruegeria pomeroyi DSS-3]
MSKRDYYDVLGVSKGASADEIKKAYRGKAKELHPDRNKDNPDAESLFKEVNEAYEVLKDAEKKAAYDRFG
HAAFEGGMGGGQRPGGGFGSGDFSSAFSDVFEDLFGDFMGGQRGGGGRRAARGSDLRYNLRVTLEEAFSG
LQKTINVPTAVACSSCEGTGAEGGVEPTTCPTCSGMGKVRAQQGFFTVERTCPTCSGLGQIIKNPCKSCR
GQGRVEKDRALSVNIPAGVETGTRIRLAGEGEAGMRGGPPGDLYIFVEVAKHELFERDGVNLYCRVPVSM
AKAALGGAIEVPTIDGGRGRVQVPAGSQSGRQMRLRSKGMPALRGGGIGDMFIELAVETPVNLTSKQKDL
LREFDELSEDNNPETKSFFSSVKSFWDGMKG
>gi|56694973|ref|YP_165318.1| phosphomethylpyrimidine kinase [Ruegeria pomeroyi DSS-3]
MVPIALTIAGSDSGGGAGIQADLKAMSALGIYGASVITAVTAQNTCAVTAVHEIPTEIIRAQIEAVLDDL
DVRAIKIGMLATPEIIGAVADAIAGFDGPVVLDPVMVAKSGDALLAAEAVASLKERLLPRATLLTPNLPE
AARLLSLRDAADQDEMVSQARALIALGAEAVLMKGGHAKGAICHDLLVGRAGVLAEFSAPRRMTKNTHGT
GCTLSSAIAAGLAKGRTLKAAVRDAHTYLQGAIVAADRLGVGKGHGPVHHFHRVWSA
>gi|56694974|ref|YP_165319.1| thiamine biosynthesis oxidoreductase ThiO, putative [Ruegeria pomeroyi DSS-3]
MTLWSVIGAGVAGLTVATEMVARGARVQVFDPGGPPGPHGCSWWAGGMLAPWCEYENAEEPVLRLGQQAI
GWWEQHTTVTRRGTLVVANPRDLPDLRRFGRRTEGFREINQTEILGLESDLGAFSKGLHFPDEAHLDPRR
ALSDLYRGLLDKDVDFHRKPAPAGLENAIDCRGLHAREVLHDLRGVKGEMLVIRAPDVALTRPVRLLHPR
MPLYVVPRADHVYMLGATMIESEDSGRITARSMLELLSAAYALNPAFGEAEVLEIGVDLRPAFPDNLPRI
RRLGRTIYANGLYRHGYLLAPALAQGVADLALNNTHTELVDEDRA
>gi|56698725|ref|YP_165320.1| thiamine biosynthesis protein ThiS [Ruegeria pomeroyi DSS-3]
MKIVLNGEPREVEAETLAALLAECGLSGRVATAVNESFVPSSLRGAHRLNDGDRVEVLAPMQGG
>gi|56694975|ref|YP_165321.1| thiazole synthase [Ruegeria pomeroyi DSS-3]
MRAFYGTELPNPLMLGTAQYPSPAILEQAFRASGAGVATVSLRRESGAGQTFWSMIRDLGVLILPNTAGC
HTVKEAVTTAHMAREVFGTPWIKLELIGHTDSLQPDVFGLIEAARILTEDGFQVFPYTTDDLIVGERLLA
AGCEVLMPWGAPIGSGRGLNNEYALRAMRAEFPDTPLVVDAGIGLPSHAARALELGYDAVLLNTAVARAG
DPVEMARAMALAIQAGQLAHRADPIEARDMASASTPVIGKAFLS
>gi|56694976|ref|YP_165322.1| thiamine-phosphate pyrophosphorylase [Ruegeria pomeroyi DSS-3]
MTLDRFYPIFDHTDWLRRMLPLGVKLVQLRIKDQSDPVIRAEIDTARDLCRAHGAVLVINDYWQAAIDAG
CDWLHLGQEDLDQADLPAIRKAGLRLGVSTHDDDELERVLGMDPDYVALGPVYPTILKQMKWHQQGLPRV
TEWKARVGSIPLVGIGGMSVERAPGVLGAGADIVSVVTDITLNADPEARVHQWIEVTR
>gi|56694977|ref|YP_165323.1| thiamine biosynthesis protein ThiF [Ruegeria pomeroyi DSS-3]
MDRGHEMSRYARQMILPQAGGEGQARLAGARVLVVGAGGLAASALPLLAGAGVGQIDIFDGDHIELSNLH
RQTLFAEGDVGRAKAEVAAERCGALNSGIVLTGTKRSITPENVILACRDTDLVLDCADSYAASYLLSDTC
QALGKPLISASVLGLGGYVGGFCGGAPSLRAVFPDAPDSAASCATAGVLGPVVSILGSIQAQMALSALLE
LAPSPLGQMVQIDALSWRNSTFRFDGAPEPATAFRFVAPSDLSADDLIVELRTEGEAPQPAHPSARRMTV
SEIEISDTNKEKRLALCCATGLRAWRSAEQLQPIWPGEIVLVAAATS
>gi|56694978|ref|YP_165324.1| ABC transporter, periplasmic substrate-binding protein [Ruegeria pomeroyi DSS-3]
MPPASGPGALRNSCNRFGRARSFSLRPPHHERKRDMKHLVTALALLAATPALAQDKMTLLLDWFINPDHG
PIIVAQEKGYFAERGLEVEIVAPADPSAPPRLVAAGQADLAVSYQPQLHLQIHEGLPLKRVGTLVATPLN
CLLVLDNGPIKSPADLKGKKIGFSVAGVEEAILTTVLGKYDVALSDVEMINVNFSLSPALMSGQVDAVIG
AYRNFELNQMDIEGEPGRCFYIEEEGVPSYDELIYVANPDRMDAGKIARFLEATEKATQFIVNNPQASWE
IFSATSPELQDELNKRAWADTLPRFALRPAGFDAGRYARFETFLKDSGMIDSVNSVSAITIDVTAE
>gi|56694979|ref|YP_165325.1| TENA/THI-4 family protein [Ruegeria pomeroyi DSS-3]
MRAAAGQPWRDYTRHAFVEGMKDGSLARDAFVHYLRQDYVFLIHFARAWALAVVKGETHAEMLAAVGTVN
TLVVEEMQLHVGVCEAAGISKDALFATPERPENLAYTRFVLEAGYSGDLADLLAALAPCVMGYGEIGARL
ATEATSEAYKDWIDTYAGPEYQAACKAVGELMDQALTRRIGADFEASPRWERLCRTFRTATELEVGFWQM
GLTP
>gi|56694980|ref|YP_165326.1| ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MPDLSHRDRARGRFLADGVDPVTPAPAITVAGSASIDGARLFAPLTLTLEAAQWTCLLGGSGVGKSTVLR
LIAGLETGAEFSGAITASDDAPVLKRVAYMAQDDLLLPWATVAQNVGLGARLRGEQVDRARLDDLLRRVR
LTAHAAKRPAELSGGQRQRVALARTLMEDKPVVLLDEPFSALDARTRADMQELAAELLAGRTVLLVTHDP
AEAARLGHSIQVMTAAGLTPVAPPTAQIPRAVDDAATLECQAALLRMLREGVQ
>gi|56694981|ref|YP_165327.1| ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MSGRAAQDAAGGCAMTRWLPAVAATLFALAIWQAVVSLTDLPRFILPGPVLVAETWWQSRWLIAEHTAVT
ALEVLIGLACGAVLGVATALQLASSRIARVLVQPMLVFTQALPVFALAPILTLWLGYGLWSKVAMAVLII
YFPITAAFFDGLMRTPVGYLDLARTMQASPRAVLWHIRVPAALPQLASGLRLAAVYAPIGAVIGEWVGAS
KGLGYLMLLANGRAKTDLMFAAMLTLGVLSVLLHLAMRRATRRMAGER
>gi|56694982|ref|YP_165328.1| DNA repair protein RadC [Ruegeria pomeroyi DSS-3]
MPSYIRDHRKRLRERFMTGGAAALPDYELLELVLFRSIPRQDVKPLARLLLDTFGDFNRVLTAPVERLAE
VKGVGEAVITDLKILEASAHRMARARVMQRQVISSWDALLDYCHTTMAHRETEQFRVFYLDRKNVLIADE
EQARGTVDHVPVYPREVAKRALELNASALILVHNHPSGDPTPSQSDIDMTARIRSACEALGLTLHDHLII
GKSVELSFRAEGYL
>gi|56694983|ref|YP_165329.1| OmpA domain-containing protein [Ruegeria pomeroyi DSS-3]
MNWLRAAALAALSVFPAVPAAAQDITLTSHDGKVEISGNLLGFDGEFYRVETRFGELTVDGSGVTCDGPA
CPNLTDFVAELALSGSSTMAEVLLPALIEGFALRNRMQTRRETDSEARFSYLLFQAGSDRPQARFTFRVS
TTDEGFADLLADEADLVMALREIRPDERRRALELGLGDMTDSNRSRVLALDAMVPVVAPVNPVRQVSVPQ
LAQVFAGEIDNWAQLGGPDAPIALHLPAAGSGLAQAVEDRLLLPAGKSLPETVARHDRSSLLARAVAIDP
FAIGIASYSETGTARALTLTGDCGFSLAATRRNIKTEDYPLNSPMFLYMPARRLPKLAREFMAYMRSPAA
QIVIRRAGFVDQAPELIPVAVQGNRLANAIAAAGTEVPLTELQRLVSTLSGMQRLSLSFRFETGSSRPDA
QSRTNISQLAQELESGAYDARQLLFVGFSDGDGAAEGNTRIALKRAEAVRDAVLQTAETLDPARVEVSVD
AFGEALPMACDDSDWGRQVNRRVEVWVK
>gi|56694984|ref|YP_165330.1| hypothetical protein SPO0056 [Ruegeria pomeroyi DSS-3]
MPADYLAAIFRSSTRLFNTRKSPAAEQSGMDMSRSWVVSDPAPRSSSDCAEMSRPQLVAVTSASIDKVMV
PAVSLSPFG
>gi|56694985|ref|YP_165331.1| preprotein translocase subunit SecA [Ruegeria pomeroyi DSS-3]
MLGLGTLAKKVFGTPNDRKIKATRPVVAQINALEEEFAKLTDEGLKQKTDELRKRALDGESLDALLPEAF
ANCREAGKRALGLRAFDTQLMGGIFLHQGNISEMKTGEGKTLVATFPAYLNALTGKGVHVVTVNEYLAKR
DSEWMGKVFAALGMTTGVIWSGQPDAEKMAAYESDITYATNNELGFDYLRDNMKGELSEVYQKQHNFAIV
DEVDSILIDEARTPLIISGPAQDRSDLYVAIDALLPALSDDHFELDEKTRNVTFTDEGNEFLEAQLVARG
LLPEGQSLYDPESTTIVHHVNQGLRAHKLFQRDKDYIVRDGEVVLIDEFTGRMMPGRRLSDGLHQAIEAK
ENAQIQPENVTLASVTFQNYFRLYDKLSGMTGTALTEAEEFAEIYGLGVVEVPTNRPIARTDEDDQVYRT
AAEKYGAMIDETKKAHEKGQPVLLGTTSIEKSEMLSQMLTKEGIEHNVLNARQHEREAQIVAEAGRYGAV
TIATNMAGRGTDIQLGGNVEMKVLEALAENPEADPVELRAAEEARHAEEKQKVLDAGGLYVMASERHESR
RIDNQLRGRSGRQGDPGRTVFYLSLEDDLMRIFGSERLDKVLTTLGMKEGEAIIHPWVNKSLERAQAKVE
GRNFDMRKNVLKFDDVMNDQRKVIFNQRREIMATEDLSDVVADMREQVIDDLIDEYMPPKTYADQWDTQG
LYAAVIEKLGIDVPVIEWAAEEGVDDDEIRERLIKASGDYMESKAADFGAENMRNIEKQVLLQTIDSKWR
EHLLKLEHLRSVVGFRGYAQRDPLNEYKTESFQLFEGLLDSLRETVTQQLSRVRMLSEEEQRQMMAQMMA
QQNQAEQAAVQAEAVAEAKASGDARPGFVEDDPSTWGNPARNDLCPCGSGKKFKHCHGRLA
>gi|56694986|ref|YP_165332.1| peptidyl-prolyl cis-trans isomerase domain-containing protein [Ruegeria pomeroyi DSS-3]
MPSLAFALVMALPVAAETKAEADTVVARVNGEEITLGHMIIARASLPQQYQQLPDDVLFDGILDQLVQQT
LLKQQQKGETPKQIVLSLENEERSLLAGETIEEIMAVATTETAIQAAYDAQYADGFGGEEYNASHILVPS
EDEAKAVKELLDNGADFAATAKEKSTGPSGPNGGALGWFGAGAMVPEFEQAVVALNAGQVSDPVQTQFGW
HVIILNDKRKSEAPALDEVRDELAGRIQQDAIEARLAELTKDSEIEKPELTGVEPAVLRQLELVRE
>gi|56694987|ref|YP_165333.1| bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein [Ruegeria pomeroyi DSS-3]
MAKITKVSPLAPAAFPTLPVIDGVRLASIAAGVRYQGRTDVMLAVLDPGTSVAGVFTRSATRSAPVLDCQ
AKIGGASDGPAAILVNSGNSNAFTGHYGQTSVAEVTQAVADVTGVPVGRVFTSSTGVIGEPMKHERIVAK
LGDLNAALSPDALEDAARAIMTTDTFAKGASRTVGIDGKMVKIAGIAKGSGMIAPDMATMLVYIFTDARV
EQGALQAMLSAMTDKTFNCITVDSDTSTSDTLLLCATGASGVDAEGNAEFAAALEAVMLDLAQQVVRDGE
GATKFVEIRVTGAANDVDAKVHGLAIANSPLVKTAIAGEDPNWGRVVMAIGKSGAAADRDLLSISFGDIL
VAEKGWVSPNYREEDAAAYMKGQDLVIGVDLGLGAGKSTVWTCDLTHGYIEINADYRS
>gi|56694988|ref|YP_165334.1| mutator mutT protein [Ruegeria pomeroyi DSS-3]
MKTVLVSAVALIDVDGRVLLAQRPEGKSMAGLWEFPGGKVEPGETPEVALIRELHEELGINTWASCLAPL
TFASHGYDDFHLLMPLFACRKWEGIPQSREGQALKWVRATELRNYPMPPADVPLIPILRDWL
>gi|56694989|ref|YP_165335.1| translation initiation factor IF-2 [Ruegeria pomeroyi DSS-3]
MSDTDGKKTLGLRGSRPGNVKQSFSHGRTKNVVVETKRKRVVVPKPGAGKPSAGGSSPAGDPSRRPAGIS
DAEMERRLNALKAAKARESEEAAQREAEEKARAEERERRRAEQEAKEREQREAEQRAREKAEEEERQRRE
AEEEAKRAAVRAAAEQEAPKAERSAERAPAAARPEGGDNARRTTDRDREREQRQTRGKGRQDGRRSGKLT
LSQVTDGEGGRQKSLAAMKRKQERARQKAMGGAAEREKVIREVQLPEAIVVSELANRMAERVADVVKELM
KMGMMVTQNQTIDADTAELIIEEFGHKVVRVSDSDVEDVISDIEDAEEDLKPRPPVITIMGHVDHGKTSL
LDAIRDAKVVAGEAGGITQHIGAYQVKTDGGATLSFLDTPGHAAFTSMRSRGAQVTDIVVLVVAADDAVM
PQTVEAINHAKAAGVPMIVAINKIDKPEANPTKVRTDLLQHEVVVEAMSGEVQDVEVSAKTGEGLDELLE
AIALQAEILELKANPDRPAQGAVIEAQLDVGRGPVATVLIQKGTLRQGDIFVVGEQYGKVRALINDKGER
VSEAGPSVPVEVLGLNGTPEAGDVLNVTSTEAQAREIAEYRAQVAKDKRAAAGAATTLEQLMAKAKADEN
VAELPILVKADVQGSAEAIVQAMEKIGNDEVRVRVLHSGVGAITETDVGLAEASGAPIMGFNVRANASAR
NTANQKGVEIRYYSVIYDLVDDVKAAASGLLSAEIRENFIGYANIKEVFKVSNVGKVAGCLVTEGVARRS
AGVRLLRDNVVIHEGTLKTLKRFKDEVAEVQSGQECGMAFENYDDIRPGDVIEIFEREEVTRTLT
>gi|56694990|ref|YP_165336.1| hypothetical protein SPO0062 [Ruegeria pomeroyi DSS-3]
MTRGGAHKDRTEGPERKCIATGESQPRFGLIRFVAGPDGQLVPDIAGKLPGRGTYVAADREALQKAVDKK
LFARGLKQQVQVPDGLVDEVERQLIRRVVDLLSLARKSGDAVSGYEKVKTWLDKEEAQVLIQASDGSGRG
KTKLSTPHFGKYIGWLTADELGMAFGRQTVIHAALASGGLAKRVVEEAQRLRGMRKTDDGGKGRAEG
>gi|56694991|ref|YP_165337.1| transcription elongation factor NusA [Ruegeria pomeroyi DSS-3]
MAITSANQLELLQTAEAVAREKMIDPGLVIEAMEESLARAAKSRYGAEMDIRVSIDRKTGKATFTRVRTV
VADEELENYQAEFTVDQAKQYMENPQIGDTFVEEVPPVEMGRIAAQSAKQVILQKVREAERDRQYEEFKD
RAGTIINGLVKREEYGNVIVDVGAGEAILRRNEKIGRESYRPNDRIRCYIKDVRREPRGPQIFLSRTAPE
FMAELFKMEVPEIYDGIIEIKAVARDPGSRAKIAVISYDNSIDPVGACVGMRGSRVQAVVNELQGEKIDI
IPWNEDQPTFLVNALQPAEVSKVVLDEEAGKIEVVVPEEQLSLAIGRRGQNVRLASQLTGLDIDIMTEAE
ESARRQKEFESRTNLFMETLDLDEFFAQLLVSEGFTNLEEVAYVELDELLVIDGVDEGTAEELQARARDY
LEAQAKAALDNARALGAEDSLIQFEGLTPQMVEALAKDDVKTLEDFATCADWELAGGWTTVDGQRVKDDG
ILEPFGVSLEDAQDMVMTARVMLGWVDPTELLEEAEETEEGETATDEEAGA
>gi|56694992|ref|YP_165338.1| hypothetical protein SPO0064 [Ruegeria pomeroyi DSS-3]
MTNNLIAKAAIDRRLAEIVSPVIADLGYELVRIRLMSGKSTTLQIMADKPDGGIEVDDCAAISNAVSATL
DVEDPILDAYTLEVSSPGIDRPLTRLKDFEMFEGYEAKIETTEMIDGRRRFRGELAGIEGNEVLINLDQN
GETVTIGLEFDWLSDAKLVLTDDLIKEMLRQRKAAGVLNEDQFDEIVEEAPETGATTMARDGSEEETK
>gi|56694993|ref|YP_165339.1| peptide/opine/nickel uptake ABC transporter periplasmic substrate-binding protein [Ruegeria pomeroyi DSS-3]
MTRIDRRALFASGAAAALLASAGMSLADRPRAGGSLRLAVPRDDSLERIARGAVFDTLTEIAPDGTLRGE
LATGWQPDDSARVWSFDLREDVTFHDGTRFSASDAAASLAEIGLAEALGPTRLRLELAEADPGLPFRLAD
TRFAITRAGGAVTPLEQANGTGCYRVERAQDGRHFLGRKVVGHYKQGQAGWADTVEVIVIPDPAVRAEAL
RDGYVDVAALPLPDGLRDRTRFRYHPSEDDMALAAAVSVGLPRQISSRSALDDGRLAERWWVG
>gi|56694994|ref|YP_165340.1| proline iminopeptidase [Ruegeria pomeroyi DSS-3]
MQYLHPPIEPFDQRMLDVGQGHRIYVEQSGNPNGIPVVVLHGGPGGGCSPAMRRYFDPSVYRVILFDQRG
CGRSRPHASVTDNTTWHLVADIERIRKTLEIDSWIAFGGSWGATLALIYAQTHPDRVTHLVLRGVFLMTQ
AELDWFYGGGAGRFWPEPWSRFAALIPENERGDMIAAYHKRLFSGDMAQEIRYARAWSAWENALASIQSN
GTTGESPGDYARAFARLENHYFINDGFLEFDGQILANMGRISHIPGHIVQGRYDMICPPNSAWKLSELWP
NADLRMIRNAGHALSEPGISAELVRIMDAIAEEVTA
>gi|56694995|ref|YP_165341.1| 3-demethylubiquinone-9 3-methyltransferase [Ruegeria pomeroyi DSS-3]
MQAHPNTVDPSEIAKFEAMAAEWWDPHGKFKPLHMLNPCRLDYITRQIAGEFDRDLGTERPFAGLRLLDI
GCGGGLLSEPMARLGAEVVGADAAEGNLPVARIHAEQSGLEIDYRHTTAEALAEAGEQFDVVLNMEVVEH
VADPLSYLRATHDLLKPGGLQICSTINRNPKSYAMAILGAEVVMRWLPRGTHDWSKFITPDELFDLLRQA
GLEPVDRKGFVFNPISWQWSISDRDLSVNYVTASLRPR
>gi|56694996|ref|YP_165342.1| transcriptional regulator, putative [Ruegeria pomeroyi DSS-3]
MADEIHTLAVSLFSEILTADQLLRNRLSRVLPKGMEISHFSVLNHLVFVGDERTPAQLASTFHVTRGAMT
NTLAKLEWAGYIHIRPDWDDARRKMVAISPAGRQARDQAISMISPLIDQVVGELGAERVRLALPVLRDLR
IKLEIN
>gi|56694997|ref|YP_165343.1| carbon-nitrogen family hydrolase [Ruegeria pomeroyi DSS-3]
MKTALLQLTSSDDPAANLDMVRGMVAEAAAQGARWVLTPEVTNCVSNSTTRQREVLQHEEDDITLAGLRA
QATELGIWLLIGSLGLKTHDADGRFANRSFMIGPDGGIVARYDKIHMFDVQVTETETFRESANYRPGDRA
VLAPTEFGTVGMTICYDLRFPHLHAALAQAGATVLTVPAAFSPVTGAAHWESLLRARAIETGCWVLAPAQ
TGTHPNSRGKPRRTHGHSLVVAPWGEVRIDAGSEPGIHIFDLDDTSVTEARRRVPSLTHKRAFDGP
>gi|56694998|ref|YP_165344.1| glutaredoxin [Ruegeria pomeroyi DSS-3]
MKPVEIYTSPLCGYCHAAKRLLDQKGIAFTEIDVLTNPKRKPEMIQRAGGRRTVPQIFIDGQHVGGCDDL
YALEQDGKLDPMLASR
>gi|56694999|ref|YP_165345.1| competence protein F, putative [Ruegeria pomeroyi DSS-3]
MWQQIQTAIETVYPPRCLGCGDLVTSDFGLCGKCWRDTPFIDGTVCDSCGAPLPGARDGHRIECDDCMAH
PRPWSDGRAALLYTGRARRMVLALKHGDRPELARPGGLWMARAAAPLLQPNMLIAPVPLHWSRLLRRRYN
QSALLAQSVGRQTGLPVCPDLLVRDRATPMLEGMSMTERAKTLSGAISVHPKRRHRLTARKLLLIDDVMT
SGATLAASAQACLNAGADQVFVLVLARVTREA
>gi|56695000|ref|YP_165346.1| hypothetical protein SPO0072 [Ruegeria pomeroyi DSS-3]
MTTPGSSLPPALVDRTALAARRARMRDAALFLHHAALDEVQDRLSLVNRTFTDMAVVTPAPALWAGSFPM
ARFVAEDEMLDLAPQSCDLVVHAMALHWANDAVGQLIQCRRALRPDGLLLAICFGGQTLHQLRAALAEAE
AQVSGGISPRVAPMAEIRDLGALLQRAGLALPVADSLTLTAEYRDLPHLMRDLRQMGEANALSARLRHPT
QRAVFERAEEIYAAHFATPDNRLPATFELICLTGWAPDDSQPKPLRPGSASARLAAALGTSETPLPD
>gi|56695001|ref|YP_165347.1| ferrochelatase [Ruegeria pomeroyi DSS-3]
MGRVGVLLANLGTPDDYSYWPMRRYLNEFLSDKRVIDYPAWKWQPILQGIILTKRPFSSGAAYESIWNHD
KGESPLMTITKDQTAKLRAALAERYGDRVMVDFCMRYGNPSTKSKVRQMVTEGCDRILFFPLYPQYAGAT
TATANDQFFRALMDETWQPAARTVPAYFDQPAYVDALAQSIERAYAAMDSRPDVLVCSYHGMPERYLMQG
DPYHCQCVKTTRLLRERLGWDESEVVSTFQSRFGPEEWLKPYTVDHVAELARQGKRNIAVVAPAFSADCI
ETLEEINEEIRESFEHAGGERFTYIPCLNDEDAHIAALAGVVASNLGGWLD
>gi|56695002|ref|YP_165348.1| hypothetical protein SPO0074 [Ruegeria pomeroyi DSS-3]
MKKLVLAAALTAAASTAFAGNLSEPVVEAPVIVEETQSSSSGILLPLILLVLVGAAVAANN
>gi|56695003|ref|YP_165349.1| ErfK/YbiS/YcfS/YnhG family protein [Ruegeria pomeroyi DSS-3]
MNFCVKVLLMVKKPTTLSTRRSFLVGAATALGTPALAQFTPEDPLRPAPEPEAPVRRNTSSFRALDWRPY
FSNTRNGAILVDTVSRALHYWSEDQSVYRLFPSSVPLTDELTRRGRTSVIRKVVGPSWAPTPSMKKRNPE
WPDYIPPGPDNPLGTHALYLSWKYYRIHGTHDTRKIGRRSSNGCIGLYNEHISQLFDLTKVGTQVLLI
>gi|56695004|ref|YP_165350.1| putative lipoprotein [Ruegeria pomeroyi DSS-3]
MTMTRLISLLLAGFLALAACTDTGGSGQLGSDGKPLPKVYRIRGDASKLQFRMLDSVNALRQASGLGVVQ
LSPELNAAAATHARDMSVQNRPWHFGSDGSSPIDRARRAGYTGIFLGEAISETYETEVETLAAWMEEPGS
RSVILDPKAIMMGFAWFQENNGKIWWALEMGS
>gi|56695005|ref|YP_165351.1| PTS IIA-like nitrogen-regulatory protein PtsN [Ruegeria pomeroyi DSS-3]
MELSSILKPNAVRVIGAASSKKRLFQEITDLAEATLKLDAQETLEALLERESLGPTGVGHGVALPHARVA
GLDQVAGVFVLLEKPLDFGAVDRQPVDLAFALFAPEDAGVEHLKALALVSRTLREQAVCTKLRANPDPTK
LYAILTESHPLQAA
>gi|56695006|ref|YP_165352.1| ribosomal subunit interface protein, putative [Ruegeria pomeroyi DSS-3]
MRYQISGKQIDIGAALQSHVQTELGEVVSKYAQRPTDAHVVFSRSAHEYVCEATVHLSTGLTAQAKAHAT
EIYAAFDGCCEKMDKQLRRYKRRLKDHHKDRAEPVELFGASSYILASEEPDAQSEPDSLQPMIVAEMETK
IPSLSVGEAVMQMELAGAPVLVFRNESKDGLNVVYRREDGNIGWIDP
>gi|56695008|ref|YP_165353.1| ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MSKPQLTVTEGSSGLRIEKLRKSYRKKTVIRDVTMTLGRSEVVALLGPNGSGKTTTFYSVAGLVFPEAGK
VSIDGQNVTTLPMYRRARMGIGYLPQEMSIFRGLSVEDNILSVLDITQKHAHKRRERLEELLSDFSIEHL
RRAPALALSGGERRRVEIARCLAADPKYLLLDEPFAGVDPISVGDIRHLVSDLRNRGIGVLITDHNVRET
LEIVDRAYILHDGQVLMSGSPEEVVENENVRRVYLGENFRIS
>gi|56695007|ref|YP_165354.1| hypothetical protein SPO0080 [Ruegeria pomeroyi DSS-3]
MIEIRALILGLVLALGAVAAQAEGTKVAFGAVKADPTLPVEVTADSLDVSQEDGSAEFQGNVLVSQGEMR
LSAKRVLVIYNQEASGIERLEATGDVVLVSGSDAAQAQRADYTIGTGVIVMTGDVLLTQGKNALSSGKMT
VNLTSGTAQMVGRVKTILNSGSD
>gi|56695009|ref|YP_165355.1| hypothetical protein SPO0081 [Ruegeria pomeroyi DSS-3]
MAIDSYSRVVQYLKVLLPLTALGLLSAVFLLSSRGTDSVAPIPFAEDEIADRTRGQQITGPFFTAVTPKG
EQIQVQATLARPGGENAPAEATDLIAELLLLGGKRIRLTSDLGTVQLDKDLAIFTGNVVITTSDGLTVTT
DQLNAGLSGISGETPGNVRGTGPIGEFTAGSMQMGAENEDGPIHIRFKNGVKLLYDPKAAER
>gi|56695011|ref|YP_165356.1| arabinose 5-phosphate isomerase [Ruegeria pomeroyi DSS-3]
MTDRSSFIDTARQVVLDEARALDALSESLGDGFAEAVELILRTKGRVIVSGIGKSGHIGHKIAATLASTG
TPAYFVHPAEASHGDLGMLSGDDVVLAISNSGEAPELANLLAFTRRFAIPLIGLSSKSESSLMQQADVHL
LIPALGEACGFGMVPSISTTLTLAMGDALAIALMKYRDFRPENFRVFHPGGKLGARLSRVSDLMHGGEAV
PLIAADTPMSEALLEISRKGFGVVGVTDGAGHLAGIVTDGDLRRHMSGLLDKTAAQVMTANPTTIAPDSL
AEEAVAIMNARKITSLFVVDPAEPGVARGLLHIHDCLRVGLG
>gi|56695010|ref|YP_165357.1| exonuclease, putative [Ruegeria pomeroyi DSS-3]
MANHLYKNDLPDGLDLGPVVAIDCETMGLNPHRDRLCVIQMSGGDGNTHIVQVEKGQTAAPNLCAMLENP
EVLKLFHFGRFDIAALYHAFGALTAPVYCTKIASRLVRTYTDRHGLKNLCQELLGVDISKQQQMSDWGAE
TLSEAQLDYAASDVLYLHRLREALDGRLAREGRADLAQSCFDFLPTRARLDLVGWPETDIFAHS
>gi|56695012|ref|YP_165358.1| betaine aldehyde dehydrogenase [Ruegeria pomeroyi DSS-3]
MKFQPEASHFINGAYVEDTAGAVIDVIYPATGEVIARLHSATPAIIDQALEAARQAQAQWAAMTGTERGR
ILRRAADIMRARNHDLSVIETHDTGKPIQETTVADATSGADALEYFGGLAGSLTGEHIPLGGGDFAYTVR
EALGVCVGIGAWNYPTQIACWKGAPALACGNTMVFKPSETTPLSALKVAEILIEAGAPKGIYNVVQGYGD
VGASLVTDPRVAKVSLTGSVPTGRRVYAAAAESIKHVTMELGGKSPLVVFDDADIENAVSGAILGNFYSS
GQVCSNGTRVFVQKGIKEAFLSRLAERLATAVIGDPMDPATNFGPMVSEAQMNIVLGYVDKGKAEGARLV
YGGTRLDRDGFYLLPTVFADVTDDMTIAREEIFGPVMSVLDFDTEEEVLERANATEFGLAAGVFTRDITR
AHRMVAGFEAGTCYINSYNLAPVEAPFGGSKQSGVGRENSKLAINHFSEMKTVFVSMNDIQAPY
>gi|56695013|ref|YP_165359.1| hypothetical protein SPO0085 [Ruegeria pomeroyi DSS-3]
MDAMTQHYDAMPQMGPSNDYHLLPVTEKQLRFARSIAARASLDIPIEAQRDRRMLSAWISAHRAPESSPF
DRYPSGKQVAYAERIARAKRRAVPSECFHDKAAMSAWIDRNK
>gi|56695014|ref|YP_165360.1| putative lipoprotein [Ruegeria pomeroyi DSS-3]
MKTRVFAAAALALSCSVPAWAADRAAVLTTYADIAEAKYQDSLITARALQVAVDALIADPSAQTLAAAKQ
AWLAARDPYQQTEVYRFGNAIVDDWEGKVNAWPLDEGLIDYVDASYPGASDENGYAALNVIATPVFDLSG
TTVDASQITPELLSGTLHEADGVEANVATGYHAIEFLLWGQDLNGTGPGAGNRPWTDYAPGADCTGGNCD
RRGAYLQAATDLLISDLEWMAAQWAPGGDARTSVTADETAGLVAMLTGMGSLSYGEQAGERMRLGLLLND
PEEEHDCFSDNTHNSHYFDGLGIRNVYLGSYTRVDGTVISGASLSDLVADADAALDAEVKDRLNITMDAL
GAIRSAAKGGFAYDQMLARGNAEGEALIMAGVDGLVEQARSFQRLFPVLGLDDIAFEGSESLDNPGAVFH
>gi|56695015|ref|YP_165361.1| hypothetical protein SPO0087 [Ruegeria pomeroyi DSS-3]
MPAKLLIQESSIMTYRHFAALTGAAALFAGAVQAQEAPGFTWEGSLELEYARTFKSDTPGNEFGAATGTL
ELSGAYRFNDTFSVFAALTGESLNDPTPGDRNFTDWGLYIKELGVQIETGSASFQLGKVSPSFGIAWDQT
AGFFAADLAEDYELTEQLGALVAVDLGAAGMLHAGLFYADDTALSRSAGFRRARNSTASGGAGNTGQLDN
GAVTWIKSFGGTELRLGVRHLSRGAGDVKSENGVVASLFHSFHHMPLDLFAEVASFSGYGGTADDATYAT
LNAAYALGDVTLSGTYARRDIDSTGLTELFSIGAEYEFGERYLVGAALARVEEAGATDHVFGINFEIALG
V
>gi|56695016|ref|YP_165362.1| hypothetical protein SPO0088 [Ruegeria pomeroyi DSS-3]
MNIWGPHIVQARRAVAIFCRGLLVLMPALSLLGLTAEAEPRSADDRQRIAAVTAPATGFTVAEPFEQLPG
GAATVSGDLGRDAFSRPSANMSFERELDFHLGQALFDKLWVASPSSTKASDGLGPLYNARSCQACHIRDG
RGQVSGGPGLVLRIGRVRGDGVLPDPLFGLQIQDSAVPGLRPEARIAVSQAETEVTLNGGEVAVLRKPRY
RLDAAEGTLHAESTLSPRLAPQMIGLGLLEAIPEAEILARADPDDRDGDGISGRPNRVHDPETGQEALGR
FGWKAGAASVLDQTAAAFASDIGISSPLRPAPWGDCTELQVECRAALHGDGDPRGAEIDGPALALTAFYS
RNLAVPARRDVDDPDVLRGKRVFYGIGCPACHVPKHVTAQLSDQPEQSFQLIWPYTDLLLHDMGAGLADE
LPQGLASGREWRTAPLWGIGLTEQVSGQARFLHDGRARTLLEAVLWHGGEAAAQRDRVIALAPEDRAALI
RFLESL
>gi|56695017|ref|YP_165363.1| hypothetical protein SPO0089 [Ruegeria pomeroyi DSS-3]
MKQLVALILCLAAAAASADPVDQVLDVHVLPGFARLADETALLANAADAGCEERDPDLRAALNGALRAWA
GVSHLRFGPTEAENRAFALAFWPDSRGMTPKALAGLIAAEDPVVQEAEGFAQVSVAARGLYALEFLLYDE
GQAGNDPYHCALIRAIVRDSAGLARAMAADWHDRYAALMRAPGPDSPYRSRDEAMQELFKALGTGLQITA
DLRLGRPLGSFARPRPNRAEAWRAGLSLLLVIEALHSQRQLALLLAEEDAGLKARLTDAFDRALGDAAAL
DDPALAGVATPAGRFRVEALQQRVNEIRQVVAQELGPKLGVSAGFNALDGD
>gi|56695018|ref|YP_165364.1| hypothetical protein SPO0090 [Ruegeria pomeroyi DSS-3]
MTTRRGFLAGLAAAGLTPRAGWADAGAPAFLSAGRVADGAYNLYGLDRRGRPLFHLPIPDRGHAAAAHPQ
RAEAVAFARRPGRFALVLNCVSGAEIARLSAPEGRHFYGHGAFDAEGRVLFTTENDYEAGQGRIGLWDAG
AGYRRIGEVASGGVGPHDIRLMPDGQTLVVANGGVETHPDTGRVKLNLPVMQPNLSYLSLAGEVLEVVRM
PPEHRMNSIRHLDLRADGLVAFAMQWQGEGTELRPVLGLHRRGTAPVAVTGNEAEMRAMNGYGGSVIFYD
QGRRVAVSSPRGGIVQLSDVAAGRIIGGVAITDVCGLGVTGGGLVASSGSGVFTRVGGKEASRSEIAWDN
HLVAVNRA
>gi|56695019|ref|YP_165365.1| rhodanese-like domain-containing protein [Ruegeria pomeroyi DSS-3]
MYTIAALYHFTRFADPADLKPALLDLCLAQGVKGTLLLAKEGINGTIAGPRAGIDAVLAHIRALPGCSDL
EWKEATSDHPPFGKMKVRLKQEIVTMGQPDVDPRARVGHYVEPEDWNDLIRSDDVVLIDTRNDYEVAIGT
FEGAIDPMTESFRDFPAWWEANKERFHNKRVAMFCTGGIRCEKSTNYLLGQGVEDVYHLKGGILRYLEEV
PAENSTWQGECFVFDNRVSVGHGLVEGPHELCHGCRRPILPEDRNRPEYEHGVSCHLCIDETSEADKMRF
RERQKQIALARARGEDHLATH
>gi|56695021|ref|YP_165366.1| HSP70 family protein [Ruegeria pomeroyi DSS-3]
MARLGVDFGTSNTAAGLVQAGHPRVLPLEPGAQTLPTAVFIDFAARRYVYGTDAARAMMDGQEGRFLRGL
KSILGTPLAREPRMFLNERLTLIEVIARFLAEIRTRAERLSGERFDRALSGRPVHFHSASAERDAQACTD
LHDAYLMAGFSEVCFLPEPEAAALAVAGQGRMLIVDIGGGTSDFTLCDRRGTTTRMLASRGLRIGGTDFD
RVLSLDHAMPLLGYEAQIGAELGEASHSAPRALFHDLASWEKIAFVYDPATLREVRRWVRLAEQPRLFER
LAEVLESHLGHDVAYAVEAGKIAANGAAAGRIALDIVERGLGADLGNAAMQAALAGFADEIATCAMQTVR
DAGVGPDSVDQVVFVGGSSLMGVIRAALARVLPGAEQQDSEVFTAVVHGLALASEDQ
>gi|56695020|ref|YP_165367.1| pyrazinamidase/nicotinamidase [Ruegeria pomeroyi DSS-3]
MHGLIVIDVQNDFCPGGALAVPEGDAVVAPINAMMKDFDAVVLTQDWHPAGHSSFASSHPGQAPFEMIEM
AYGPQVLWPDHCVQGSPGAAFHPALRTDADLILRKGFRAAIDSYSGFFENDRSTPTGLEGYLRSRGITRL
TLAGLATDFCVQYSALDAARLGFAVEVRMQACRAIDLDGSLAAAIAAMKAGGIALT
>gi|56695022|ref|YP_165368.1| sensory box sensor histidine kinase/response regulator [Ruegeria pomeroyi DSS-3]
MHVAGSPDVDHLSEYERRYSRRGLLIRYARGRVRNFAGRQIMTFAGSFILAMTEGLHTAMLAAFAALLGE
VIDCLYLHRLPERLRQGQGYRRLLIGSTLTALVQALTISFCVWLAWTGARSGLSPLFIGSFLAGAAINAG
LVLPFHRPAAVARLAVYAGIGQYLFLIEAMEPGRLGDALLLNAAGAVMLAFMVGLFLNFVNWGFRQHRRT
TLDLIEQGRDLLRHQKEAQLLSLVARNANDSVILADSEGRIVWTNESFTRTTGYSLDEAKGRYPGELLNG
DKTDLEVSNAIADAVEAGRPFRTEILNVTKDGREIWMETNLVPVLDRNGKVEVTVAIERDVTAAKAQAEE
LAAARVAAEEGARAKAEFLATMSHEIRTPMNGVVGMAELLSETKLSIEQRQYVDTIRSSSTALLAIINDI
LELSRLDARKMELHPVNFDPVSCVRDTMRLLKPQAQAKGLRLSLETGADVPPLVYGDDGRLRQVLINLLG
NAIKFTERGGVTLRLRSEAQDPGYLLTLEVEDTGIGIAAEKIERVFERFSQADADTTRLYGGTGLGLTIS
RELVALMGGRITVDSTLGQGSCFTLCLPLGSPDDDAGQSDGQVLSPAELDRLRGLRVLVADDNRVNRLLM
GKFLADLPIRLDFAHDGQQAVAMTQRQKPDIVFMDMSMPVMSGIEATRQIRAAEGRQPLIVALTANTFDS
DREACLAAGMDDFLSKPVGRADLFRCLLHHLPPTDAAPRTASG
>gi|56695023|ref|YP_165369.1| nicotinate phosphoribosyltransferase [Ruegeria pomeroyi DSS-3]
MAVRLAYPWVIHSERGPSVDIATRVYNHKWKIDPIVRSLIDTDFYKLLMCQSVFRNKPDTQVTFSLINRT
MRIPLARIIDEGELREQLDHIRSLRLSRGESTWLRGNTFYGKRQMFRPDFMEWFEGLQLPPYHLERRDDQ
YELTFEGNWPEVMLWEIPALAVLMELRSRAVLHDMRRFELQVLYARAMTRVWEKIERLRGIDGLTIADFG
TRRRHSFLWQDWCVQAMIEGLGAKFTGTSNCLIAMRREVEAIGTNAHELPMVYSALAETDTELARAPYDV
LSDWHEEHDGNLRIILPDTYGTKGFLDRAPDWLAGWTGIRIDSGDPAEGAETAISWWKDRGENPTDKRII
FSDGLDVDKIAELHARFSGRAKISFGWGTLLTNDFRGLVPDDGLAPFSLVCKAVSANGHPTVKLSDNPEK
AMGPADEVARYKRVFGVGRQTSYAVEV
>gi|56695024|ref|YP_165370.1| hypothetical protein SPO0096 [Ruegeria pomeroyi DSS-3]
MNARSGDNVVLAILLSLLALVLFDMMGLIIKYLSPRYGAAELSAYRNFFGVFPSVIALWSSPGWHRAGRP
WRIRQWRLGLMRGVYVTFAQFLFYYSLGKLAFATASTITYANAVFMTALAVPLLGERVGLMRWAAVLLGF
AGVLLVMKPGSDSFTPDALAPLGAAFLYALTGVSARQMDSAVPSALINLYSVVAALVGALALALLSGGFT
PLAQWSDLGWIAAMGGFGGTAVLCLVASYRMTEQSNLAPFSYFGIPIAFVAGWLVFDETPWADLFPGAFF
IAGGGLMIVWRERIRSRAGRRISN
>gi|56695025|ref|YP_165371.1| aldehyde dehydrogenase family protein [Ruegeria pomeroyi DSS-3]
MTLPLWFDPTLCLIGGRWQAPRGGDTLPLINPSDGTEICRIARGTAPDIDTAVTAAEAALAGDWGRMTAT
ERGRILSRLGQLVLERVEDLAVIEAWDVGKPLTQARADAVALARYCEFYGGAADKVMGETIPYLEGYTVY
TLREPHGVTGHIVPWNYPMQIIGRSVGAALAMGNACVLKPAEEACLTALAFADLAKQAGLPAGALNVVPG
LGAEAGAALSAHPGVHHISFTGSVATGALVQQAAGRNVVPVTLELGGKSPQLVFDDADLDTALPFLVNAG
CQNAGQTCSASSRILAQRGVYEEVKARMAASYAELTVGPAMEDLRVGPLISARQKEIVTGFLDKGADLTI
AAQGRIVDHAPETGAYVRPTLFADVPPDHALARDEIFGPVQVLIPFDTEEEAIAIANGTDYGLVASIWTR
DGARQMRLAKRLRAGQVFVNNYGAGGGVELPFGGVGKSGHGREKGFEALYGFSQLKTVAARHG
>gi|56695026|ref|YP_165372.1| peptide/opine/nickel uptake ABC transporter ATP-binding protein [Ruegeria pomeroyi DSS-3]
MSLLQITDLSLSIHAYDILKRVSLTIDAGEIVAVTGESGSGKSMTALAVMQLLPGGARASGSIRLDGQEI
LTLPEAEMCALRGAAVGMVFQEPMTALNPVKTIGDQVMETILIHKAMTPIRAEERAREVLTRVGLPPDRF
PLSRYPHELSGGQRQRVVIAMAIALRPKLLIADEPTTALDVTTQAQILDLLKGLVQEYGMGMLMITHDLA
VVADMADHITVMRHGEVVEAAPTQRLLTGMSHPYTKMLFAASDHRVTLPAPPPPAPLLEVSEVVRDYALP
RTRLFAHPGHHRAVDHVSFALNRGERLGLVGESGCGKSTLTRAILGLEPVQGGEIRLAGQPVYDGKRANP
EIRRRMQVVFQDPYGSFNPRHRVDRLVTEPFHLLDAPPTGSDRSDRIAEMLTAVGLSPDDAGKYIHEFSG
GQRQRIAIARALIIRPQLILFDEAVSALDVSVRAQILDLLAQLCSEYDLTYLFISHDLSVVRTITDRVLV
MQSGRIVEQGETAQVFSDPAHPYTRALIAAAPRLPETGARRA
>gi|56695027|ref|YP_165373.1| peptide/opine/nickel uptake ABC transporter permease [Ruegeria pomeroyi DSS-3]
MSRNLILGAGLSSLVVLAALISFIWTPYDHAALNIPAKLQTPNARHWFGTDHFGRDMFSMIMVGARTSIA
VALLAVGIGMSLGVPLGLAAAARKGSWLDELIMRGNDLVFAFPSLVIAILITAVFGAGAVNAIIAIGIFN
IPVFARITRGAALSLWEREFILAARVAGKGAARISAEHILPNVANLLIVQGTIQFSLGILAEAGLSYVGL
GAQPPTPSWGRMLADAQTMVSFAPHLALIPGLAIILTVLGLNLMGDGLRDWLDPRLRVART
>gi|56695028|ref|YP_165374.1| peptide/opine/nickel uptake ABC transporter permease [Ruegeria pomeroyi DSS-3]
MLRYSLKRALSLAISLAVASLVIFAVIEIAPGDPASFMLGVNAQPDTLAALRTELGLDQSKAERYVSWVT
GMLRGDFGTSYTYRTPVSQMIADRLWVSLPLALYALALSTAIALPAGIYAAARRGKPGDLAVMGATQLGV
AVPNFWFAMMLVLIFAINLRWFNAGGFAGWDKGLTAGLHSLTLPAIALALPQAAILARVMRSALLDILGE
DFMRTARAKGLTRRQALWRHGLRNALIPVLTIIGLQFSFLLAGSIIIEQVFYLPGLGRLVFQAISARDLI
VVESVVMLLVFAVIVVNFLVDLAYALVDPRLRTRT
>gi|56695029|ref|YP_165375.1| peptide/opine/nickel uptake ABC transporter periplasmic substrate-binding protein [Ruegeria pomeroyi DSS-3]
MKRFVKQGVVSGLALSAALFAGAAWAKDDITIAMQLEPPHLDPTSAAAQAIDSVVYVNIFEGLTRFMGDG
SIVPALAESWEISGDGTVYTFRLHAGVTFHDGSAMDAEDVKFSLDRARAEDSANAQKALFAGIDSVDVVD
PLTVKVTLKEPNGNFLFNMAWGDAVIVAPESIENIKTAPVGTGPYTLGEWVQGDKIVLNRNTGYWGDQPA
LAQATFKFISDPTAAFAAMMAEDVDVFTGFPAPENLPQFEADPRFQVLVGSTEGETILSTNNKQAPFDNV
KVRQAMAHAIDRQAIIDGAMFGYGTPIGTHFAPHNPAYVDLTGTSAHDPDKAKALLAEAGLPNGFETTLH
LPPPSYARRGGEIIAAQLAEVGIKAEIINVEWAQWLETVFKGKDFGLTIVSHTEPMDIGIYARPEYYFQY
DNATFQELMGTLNSTTDPDKRTELMQQAQRIISEDYVNGYLFQLAALSVAKAGVQGLWVNAPTAANDLSA
ISWSE
>gi|56695030|ref|YP_165376.1| 3-methyl-2-oxobutanoate hydroxymethyltransferase [Ruegeria pomeroyi DSS-3]
MSATARKTAPNAQDIRARKGGVPLVSLTAYTTPMARLMDGHCDFVLVGDSVGMVLHGLNSTLGVTMEMMI
LHGQAVARGLDRAMLVIDMPFASYEEGPAQAFRNAARLMAETGAGAVKLEGGVEMAETIRFLVKRGIPVM
AHIGLTPQSINTLGGYKVQGRDDQAQAVLADARAVADAGAFSVVLEKVPATLADRITAEVAIPTIGIGAS
AGCDGQILVVDDMLGFFTAFKPKFVKRYADLGPLAEAAIAEYAAEVRARSFPAAEHVFGDQAPAKGAKA
>gi|56695031|ref|YP_165377.1| pantoate--beta-alanine ligase [Ruegeria pomeroyi DSS-3]
MSAPILRKLADLRAATAGWKRAGESIGVVPTMGALHDGHLSLVAAAKAGCDRVVVTIFVNPKQFNNPEDL
AKYPRTELADASKLAPYGVDAIYVPDPDQIYPEGFATTVSVSGLTDVMEGACRPGHFDGVATVVAKLFLQ
TGADQAYFGEKDYQQMMLVTRMAQDLDIPITVVGCPTVREASGLAMSSRNMRLSAEGLERAGRLHPVMRQ
VAERLAAGASFGDLAPGAREALGAAGFVDIEYFDLRAADSLRALDRPTEPARLLVAAWLDGVRLIDNIAV
SQLND
>gi|56695032|ref|YP_165378.1| glycerol kinase [Ruegeria pomeroyi DSS-3]
MTFILAIDQGTTSSRAILFDGEMRRVATAQREFTQHFPEAGWVEHDAEEIWQTTVEVCREVIAGQGIGPE
QIAGIGITNQRETTVVWDKAGGAPVHRAIVWQDRRTAAICERLRHAGCEDDFTAQTGLLLDPYFSGTKVK
WILDTVPGARDRAAAGELLFGTIDSFLIWRLTGGRVHASDATNAARTLMFDIHQGEWSKDICELLDVPMS
MLPEVRDCAADFGTTDLFGGQVPILGVAGDQQAATIGQACFQPGMMKSTYGTGCFALLNTGTQPVASQNR
LLTTIAYQLDGQRTYALEGSIFIAGAAVQWLRDGLGIIENAAQSGALAARADPAQNVILVPAFTGLGAPY
WKPDCRGAMFGLTRNSGPAEFCKAALESVAYQTRDLWEAMQGDWGADADVILRVDGGMSASDWAMQGLAD
RLGAPVDRPVMQETTALGAAWLAGMRAGVYPDQAGFAATWALDARFTPKMVEGDREAAYRRWKAAVAAAM
MV
>gi|56695033|ref|YP_165379.1| hypothetical protein SPO0105 [Ruegeria pomeroyi DSS-3]
MTVLIAGAGIAGLSLGLTLHQIGVPFRIYEATAVLRPMGVGINLQPNAVRELLDLGLEAELDRIGVRTRQ
LGFYSKLGKTIWEEPRGIWAGYAWPQYSVHRGALQMMLYEALIARAGADCVVTGARAAGFETGPESATLI
LSDGRRVEGRLLIAADGIHSALRAQMYPNEGEPIWNGRVLWRATTRAPAYFGGGAMAMIGHDDLRLVSYP
ISEPDGDGMVEMNWIAEKRFPLDAAWKKEDWNRAADIGDFLPDFADWRFDWIDVPALIQGAEVVYEYPMV
DRDPLPRWTGGSVTLMGDAAHPTYPVGSNGASQAILDARIIGARLLEHGITPRALAAYEAEVRPVTTAVG
QANRAGGGPDGVLQRVEDLCGGDFDDIDTVIPHAELAAHAARYKSIAGFSIEELNARPRTIAEGARIPA
>gi|56695034|ref|YP_165380.1| hypothetical protein SPO0106 [Ruegeria pomeroyi DSS-3]
MLVVISPAKRLDWAERDVATTEPAFQDDAVRLAKTARNLTLGDLKKLMGLSDDLARLNRDRFREFADAPG
ADVTRPAALAFAGDTYQGLEAASLDSEEMDWAQQHLRILSGLYGVLRPLDAIQAYRLEMGSRLKTRRGTS
LYDYWGDQLSRTLNAQADEIGTDVLVNCASQEYFGAVDPKALKLRVITPVFMEDKGGAPKIVSFFAKKAR
GAMARYIVQRRLTDPQALSEFDSGGYQYNADLSAPDKPVFLRPYQG
>gi|56695035|ref|YP_165381.1| ATP-dependent DNA helicase RecQ [Ruegeria pomeroyi DSS-3]
MFDAAPLLRDVFGFDAFRPGQEEIAQAVAEGENVLAIMPTGGGKSLCFQLPALMREGVTVVISPLIALMR
DQVRSLQEAGVEAGALTSGNTPEETEAVWQALEAGRLKLLYMAPERLASGAAMGMLRRIGVSLIAVDEAH
CVSQWGHDFRPDYLRIGELRRALGVPLAAFTATADAETQAEIVAKLFDGEEPRSFLRGFDRPNIHLAFAA
KDSPRRQILDFAGARRGQSGIVYCGTRAKTETLAQALREDGHSACHYHGGMEAEDRRIVETRFAREDGLI
VVATVAFGMGIDKPDIRWVAHADLPKSIEAYYQEIGRAGRDGGPAETLTLFGPDDIRLRRSQIDEGLAPP
ERRAADHARLNALLGLAEAMTCRRQTLLGYFGETEITCGKCDLCDSPAERFDGTTAVRMALSAMLRTEEW
FGATHLIDILLGNQTDKIRDRRHDQLPTYGVGTEWNRAQWQAIFRQMMGRDLVRPDPERHGALRMTEAAL
PILRGEAGIELRKDTVSKAARRPAVKAMVNDEDAPLLSALKAKRRALAEAARVPAYVIFPDRTLIEMAEK
RPASLDQMARIGGIGAKKLERYGAMFLEVVSGAAEMLHPARRKLAGRQTGNIYDRLLAVQADLARGPDGI
DKPLSCSASQLAKVAQMRPDDRSGLEALLGDRRWERFGEAFLDVLGQTT
>gi|56698707|ref|YP_165382.1| transposase, truncation [Ruegeria pomeroyi DSS-3]
MQISKRPRWRWQRCGATRPCRRHLDNIVIERLWRSLKQEAIYLEEITDSFQVRRISKGWMAFYNTRPHSA
LDRQTPDDAYRPGLNERNAA
>gi|56695036|ref|YP_165383.1| hypothetical protein SPO0109 [Ruegeria pomeroyi DSS-3]
MWQWLTNVFRLGLKELNSLRADPVLILLIVYVFSFAVYSVATGAKLEVSNASVAYVDQDRSALTGRILGA
ILPPEFNPPQEISAGEIESVMNSGKFVFVLSFPPSFEADVLSGHKPQIQLNVDATAMAQAGNGSVFLQQI
ILAEVAKFVSGDDITTTRLIDLVVRTKFNPNLNSIWFSSVMQIINNITILSVLLTGAALIREREHGTIEH
LLVMPVTPSEIMVAKIWANGLVIVVAAILSLWIVVQTVLAVPIAGSIPLFVCGAVLYLASVTGLGILLAT
FTTSMPQFGLLSLPVLVIMNLLSGSTTPMESMPVWLQNVMQLSPSTHFVSFSQAILYRDAGLDIVWPDMV
VMVALSAVFFFIALKRFRVTMATVR
>gi|56695037|ref|YP_165384.1| ABC transporter, ATP binding/permease protein [Ruegeria pomeroyi DSS-3]
MTPAPVASLSAVTHRYGSTLALSDVTLDIPAGCMAGLIGPDGVGKSTLLALIAGVRKLQAGGAIVLGGDI
TDRHHLRACNHRIAYMPQGLGRNLYPTLSVYENLDFFGRLFGQSEAERRARINNLLTATGLDPFPDRPAG
KLSGGMKQKLSLCSALIHDPDLVILDEPTTGVDPLSRQQFWDLIDHIREERPAMSVIVATAYMEEAERFD
WLAAMNAGQVISTGSPIEIRNAAGQPTLEKAFIAMLPEADRQGHRIDEVPPRRPVIGPPAIEAKGLTCRF
GDFIAVDHVEFQIEPGEIFGFLGSNGCGKTTTMKMLTGLQKASEGKALLFGEALNPDDMATRRQVGYMSQ
SFSLYGELTVRQNLELHARLYQLPIETRAERVAQMLHDFDLAEEADKRPDGLPLGIRQRLQLAVAVIHSP
EVLILDEPTSGVDPVARDGFWRHLIKLSRDDGVTIFVSTHFMNEAARCDRISLMHAGKVLAVGTPEDLAR
SKDTDDLEEAFVGYLREAAGNTDGRASETPAAKLPDRLEKPDRLFDLARLWAFARRESIEILRDPMRLAF
AFLGPVILMLTFGYGISFDVQELPYAVLDRDKSAESRNLMQSFSGSRYFVERPAAGSVTELDIRMRSSEL
VIAVEVPPGFGKSLLRGDQPEVRVAVDGAMPFRAETTRGYLQGLAASYMSDQTERLYGHAFDPSAASVET
RFRYNQAFKSVFALIPSVIMLMLVLIPAMMAAMGVVREKETGSIANFRSTPVTRTEFILGKQLPYVAIAM
LSFASLIIVSYGVFGVLIKGSVLALLVGTLLYVLATTGFGVLVSTFTRTQVAATFAAAVISIIPAVNFSG
LLVPVSSLSGGGRLIGLSFPSSWYQQISMGTFTKGLGFPELWLNHVALAGFAALFIAVSVLALNKQET
>gi|56695038|ref|YP_165385.1| hypothetical protein SPO0111 [Ruegeria pomeroyi DSS-3]
MCLRGTAAKLSSGSLGDLAGTEMRRRPMQWKRYGTVAVILSVLLGGAYVFWLDSQTAELPAGIVRSNGRI
EAERIDVATKLPGRIAEVRVSEGQWVEAGSLVAHMDTAEIDAQLRQAKAAVAQAEQQKLQTEALLNQRLS
EQEFAQAEFARAEQLAARGHAPQELVDQRKSALTTADAGVAAARAGIDLATATIASADATVERLQSIRAD
ADLVAPHDGRVQYILAKAGEVVGAGGRVVTLTDLTDIYMTIFLPARDAGLLAIGSEARIVLDPIPEYVIP
ATVTFVASTAQFTPKSVETADERDQLMFRVKLTIPEDLLKAYQEQAKAGVAGVGYVRTDDTAPWPDVLSV
KLPQ
>gi|56695039|ref|YP_165386.1| poly(3-hydroxyalkanoate) polymerase family protein [Ruegeria pomeroyi DSS-3]
MGQARLKAVNTPRELGAKTGSGGKPLTPPISLDSPKQKTGSKPYPDTGLPEFLDRALKARMARVTKGLSP
AALAGAYLDWIVHLATSPGKQIELSENAYRKWLRLSRHAATCSVNSNDTAPCIEPLPQDRRFRSDAWQKW
PYNLIYQSFLLNQQWWYNATTGVRGVTRQHENVMEFATRQILDMFSPSNYLLTNPEVQERTLKEGGLNLL
RGFQNWLDDLDRLQSGKPPAGAKAFRPGQEVAVTPGKVVYRNHLIELIQYTPTTDTVRPEPILIVPAWIM
KYYILDLSPENSMVKFLVDQGYTVFMISWRNPSAEDRDLGLDDYRKMGVVDAIGAVQGIVPDQKIHGVGY
CLGGTLLSISAATMGRDGGDPFASLSYLASQIDFTEPGELQLFINESQLTFLEDMMWDHGYLDTTQMSGA
FQMIGSADLVWSRSLHSYLMGDEPAMFDLLAWNADGTRMPYRMHSEYLRSLYLNNELTEGAFVVEGRPIS
VTDIRVPVFSVGTVKDHVAPWPSVYKMHLYLDTDLTFVLTSGGHNAGIVSEPGHRNRSYQIATARHGDRY
VDPETWAAQTPKKDGSWWLEWMSWLGERSGKPVPPPAMGNALTDAPGTYVHQK
>gi|56695040|ref|YP_165387.1| enoyl-(acyl carrier protein) reductase [Ruegeria pomeroyi DSS-3]
MGLLDGKRGLVVGIANERSIASGCAQAFHREGAELAVTYLNEKARPFVQPVAEALDAEIFMPLDVTADAE
MDALFEAIASSWGRLDFILHSVAYCPKEDLHGNVLDCSREGFSAAMDISVHSFMRLARRARPLMQNGGCL
LTVSYYGAEKVVDHYNVMGPVKAALESTVKYMAAELGPEGIRVNALSPGPLMTRAASGIAHFDALIDEAR
ARAPQQRLVTIEDVGNMAAGLVSDAARNVTGNISYVDAGYHVMS
>gi|56695041|ref|YP_165388.1| hypothetical protein SPO0114 [Ruegeria pomeroyi DSS-3]
MIKMSFNCTPDATFPTGKGATEQRFTATVGGDELEIDTHPWGEADLKINDKLVAHVDGDRSGVSSG
>gi|56695042|ref|YP_165389.1| bifunctional enoyl-CoA hydratase/phosphate acetyltransferase [Ruegeria pomeroyi DSS-3]
MQYIENKTFDEIRIGDSAELTRKLKADDIELFAVMSGDVNPAHVDEEYARSDMFHEVVAHGMWGGALISA
VLGTELPGPGTIYLNQNLSFRRPVGLGDTVTVRVTVASKDAGTKRLKLDCLCVNQDGETVIKGQAEVIAP
SEKVRRPRVVLPDVHLHERGARYRDLIAATHAMAPVRTAIVHPCDALSLTGALEAASQGLIVPILVAPRV
KLEAVAEEAGLVLDGVEIVDVPHSHAAAERAVALVRCGKAEALMKGKLHTDELMDPVVDRDTGLRSERRM
SHIFALDVPHYPKPLFVTDAAINIFPDLDTKRDIVQNAIDLAQALGIDRPKVAILSAVETVYPKIPSTIE
AAALCKMWDRGQITGGVLDGPLAFDNAVSKSAAKAKGIVSEVAGDADILVVPDLEAGNMIAKQLIHLAGA
EAAGIVLGARVPIILTSRADGVMSRLASSAMAQLYIHHAKKVVS
>gi|56695043|ref|YP_165390.1| acetate kinase [Ruegeria pomeroyi DSS-3]
MTDVVLVLNAGSSSIKFAVYPSGTNTVPLIRGKVAGVGRDPVFSAVRADGTAIDMVMPKNIDAAADHEAL
ISLLLDWLAEHRADRRLVAVGHRVVHGGRDFLKPVIVDDSVLSQLEQLIPLAPLHQPHNLAAIRAISRLQ
PTVPQVACFDTSFHQTQDRLAQLFALPRDLSDEGIIRYGFHGLSYEYIAGILPDHLGERAEGRVIVAHLG
NGASMCAMKNRQSVATSMGFTALDGLMMGRRCGALDAGVVLYLMQSKGLNATEIETLLYRRCGLLGVSGI
SNNMRELERSDDPKAREAIELFCFRAASVLGGLVTALGGLDAIVFTAGIGENSALVRKLICDRLACFGVD
LDPNSNEGNSPRIGSVQSSIDVLVLPTDEEIVISNATNETVALG
>gi|56695044|ref|YP_165391.1| hypothetical protein SPO0118 [Ruegeria pomeroyi DSS-3]
MSQKYQLQTLARFSSLVLVSSYFRGRRLAMKTLLTTLFSLSALAAALSIVALFTAEAQISDYGVAAFFFA
MTIALYLLARWYLIRFGRIGLLKPKLFRREPRGNALKAQTTISSAGWITDSLSAVMRKRNGVDLDIHTLV
RLEIAKIKEVGLHGKARTFEEILTETLLLRFVETDNRDRSKPPISILRQVRDTKDFWRLREMVDEHYAKS
AAKGAAYRAWEDAVGDVDQSHLLKDGWIPFLKSLPGPDINLWHGVATDFHEISEDRLDAAFWIVEQDACD
RTTASEFIMGFLQARMDIGIYDPDGTRGRLPPDPRLERFVGVINLYNDGFYKFHSLNAGVFSAVNLEDQV
ANDLLTNNEKYTGLSGLPRPRKIVKEGEKPVHSGPRGYDSPYAYWDEAGLHLKYPGDDWQKTG
>gi|56695045|ref|YP_165392.1| AsnC family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MYVAQSNSRKKEKEPSNLRSKESVLDSIDAAILRELCADARIPRAELSRRVGLSAPSVGDRVRRLEDIGI
ITGYGARIDPARLGYGLTILIRARPLPGEMANMIEAIQDTPQIVACDRVSGEDCFVARAHVRDVAEMEAV
IDRIVPFGATNSSIVQSSPVEERLVEL
>gi|56695046|ref|YP_165393.1| hypothetical protein SPO0120 [Ruegeria pomeroyi DSS-3]
MSNQARTNSASAPGTMSRMSEAVPPHAWFGVSAVFHYLGPAFAVLLFPVVGVLGVAWFRIASAALIFAPI
TKPWRTFKTSTPRERLLLLALGGCLAVMNSSFYLALDRLPISLVAAIEFMGTIGIALWGLRTGRNYLAFA
LAIIGVALLIDVASLRAMDGPDPTSDLLGLFWALLNGSLFVLYIILGHKISEGGASGGVERLGAAMTAAF
IFVMPLGFLQALEAFGAPLLVLAGIGVGICSSVIPYVCDQLAMARLPRASFAFLLALLPATATIIGAVVL
RQIPSAMDVLGVALVMIGVAVHKPAPMASRAAAEMGSAS
>gi|56695047|ref|YP_165394.1| YGGT family protein [Ruegeria pomeroyi DSS-3]
MQSLFQILMLILDVIWFFILAHVIMSWLINFQVLNMRQQLVAQIWYGLNRVLEPIYGPIRRILPPMGGLD
LTPLVVLLAIMALRIVLINNAALFY
>gi|56695048|ref|YP_165395.1| hypothetical protein SPO0123 [Ruegeria pomeroyi DSS-3]
MADISARKRIWGWYFFDWASQPYHTLLVTFVFSPFFAAVAADYFLGQGMADEAAKAQAQVVWSQCLTITG
LIIGFGAPFLGAMADISGRRMTWITLFCGMYVVGAWGLWYMDPTGGNLWWMMASFGIGFIGAEYALIFIN
AQLPSLGTKEEVGQISGSGFAFGYLGGVVALFIMLLLFVEQGNGKTLVGLDPVLGLDPDTREGTRAVGPF
TALWFVIFMIPYFLWVREPAGSGRRGSFAEAVAMVVQSVKNLRHRGSLASYLASSMFYRDALNGLYGFGG
VYARLVLGWEITMIGVFGIIAAISAAAFSWLGGLADRRVGPKPVIVGSILVLILVCATIVGMDRTQIFGI
PLAEGSGLPDFVFFFCGVLIGGFGGIVQAASRSLMVRHTDPEMPTESFGLYGLSGRATAFLAPALIGAAT
AATGSARLGVSPVVGLFILGLILLIWVKPQGDQK
>gi|56695049|ref|YP_165396.1| penicillin-insensitive murein endopeptidase [Ruegeria pomeroyi DSS-3]
MFFQVIAVFLLALIPVLGAVPAQAEPLAKELFGAQKSASRQKPAAYGSYAKGCAAGLEQLPETGPTWQAM
RLSRNRNWGHPETIDFIRDLSGFAARQKGWSGLYIGDISQPRGGPMLTGHRSHQLGLDIDIWMLQANNLR
LSGQHRENISSISLRRAKGAYVNDNWTRQHHAIMREAARDKRVARIFVFPGAKVWMCNNEKGDRSYLRKI
RPWWGHHYHFHVRLSCPRGSRGCVDQTPPPQGDGCAEAQEWVNNILNPPPPKPRDPNAPPPKKRREYVLA
DLPKQCASVLRSQ
>gi|56695050|ref|YP_165397.1| hypothetical protein SPO0125 [Ruegeria pomeroyi DSS-3]
MRLRLALAIAAALVLSGPGLAVDRGEAQHLGSFTWRGSQPWFGGFSAIEMTPDGMGMTVLSDRATILTAR
LRRDGDQIIGVEIDAVHKVRSSKNKVLKGRVGDSEGLAIGPDGVIYISFEGVARVARYARPDAPAVVLPR
PDAFRHMARNGAFEGLAMDARGRLYTLPESSRAADGSIPVYRWDGRAWSTAFHLEQLGGFLPVAADFGPD
GRFYVLERDTGAIGFRSRLRRWNVTAKGITGEEILFQSRLAAHDNLEGMSVWRDGQGRLRATMVSDDNFL
MLQRTELVEYLLPD
>gi|56695051|ref|YP_165398.1| hypothetical protein SPO0126 [Ruegeria pomeroyi DSS-3]
MLRAKRPACPRSRRTKSPHPCQNGPRNMTRAFLPGILAMAAIVVASNILVQFLILDGLLTWGAFTYPLAF
LVTDVMNRVYGAEAARRVVFAGFVTGVICSLIGSQIVLQGDGYTYAAVPLRIAVASGSAFLIAQLTDVAV
FNRFRGGRWWRAPLVSTLIGSALDTALFFTIAFSASITLFGPDADTAVNWAWEAVPFMNKGAPMPLWVTL
AFADWLVKLSLALIALVPFRVIVQRLAPARATA
>gi|56695052|ref|YP_165399.1| peptidyl-tRNA hydrolase domain protein [Ruegeria pomeroyi DSS-3]
MLYVTDDIAIQDWELSESFMRASGPGGQNVNKVSSAVELRFEAARSPSLPAPVKARLKRLAGRRWTGEGA
IVLQCDETRSQARNREIVRARLVELIARALVAPKRRIATKPTRGSVRRRLDSKKARGEVKALRGKIGDE
>gi|56695053|ref|YP_165400.1| 3-ketoacyl-(acyl-carrier-protein) reductase [Ruegeria pomeroyi DSS-3]
MNHMRLDGKTAIVTGGAQGFGAGIVAKFVSEGARVMVADINLDTARETAAQMDGDAFAHQVDVSDGNSVD
AMAAAALRRFGHVDILVNNAGVTHLPTAMEDVSEADFDRVYRVNMKSVYLTARALVPHMKDRGKGAILNV
ASTAGVSPRPRLNWYNASKGWMITATRTMAVELAPNGIRVNALNPVAGETPLLKSFMGEDTPEMRAKFLS
TIPLGRFSTPQDMGNAACFLCSDEASMITGVAMEVDGGRCI
>gi|56695054|ref|YP_165401.1| T4 family peptidase [Ruegeria pomeroyi DSS-3]
MVPGPRNLITDVPGLLVGNAQDDALKSGATVLSAEAPFMASVHVMGGAPGTRETDLLAPDKSVARIDALV
LSGGSAYGLDACSGVSDALRAAGRGYRIADAVIPIVPGAIIFDLLNGGDKDWADNPYRALGRAAFDAAGR
DFALGTTGAGTGALTAMLKGGLGSASLVLPDGTTVGALVAANPMGSVTTPGDRHFWAAPFEIDGEFGGLG
PDPSGGLGRQLESRKIRMMSAQAQDRANTTIAIVATDADLTKAQCQRMAVAAHDGIARATVPAHSPGDGD
LVFSVSTGARPMAAPERDLTLLGHAAALCLARAIARAIYLARPAPGDLLPCWHQA
>gi|56695055|ref|YP_165402.1| cytochrome c family protein [Ruegeria pomeroyi DSS-3]
MNRFVAAAFACVLAVPALAEGDAAKGEKGFNKCKSCHMIESPAGETIVKGGKTGPNLYGVVGRAAGTYEG
YKYGDSLVAAGEKGLVWDEESFVAFTQDPKSFLNTYLGETAAKSKMTFKLKSGGEDVFAYLQSVAAE
>gi|56695056|ref|YP_165403.1| isopentyl-diphosphate delta-isomerase [Ruegeria pomeroyi DSS-3]
MGILIPAWVDDRLVPVDKLEAHEKGLKHKAVSVFAVRDMDILIQRRALGKYHTPGLWANTCCTHPDWDES
ASTCAVRRLREELGITGLYPEYRHRLEYHADVGNGMVENEVVDVFLAHVRGPLQVVPNPDEVMEIRWIGY
HDLLAEVQRYPERFTPWLKIYLHHHADTIFGPDLIISAKA
>gi|56695057|ref|YP_165404.1| sensor histidine kinase/response regulator [Ruegeria pomeroyi DSS-3]
MSLVNKLAEERRARLAAERLLELKQAELSAANRKLGRHALALTKQIGEKQAEVATVRDENEKVKSDLTVA
NAKIEVAERRLWHSIQTIQDGFAFFDSDSKLIGANTAYLNVFDGLDEVAPGISYMRILQLMTEEGIIDTG
ELAAEEWRQMMHERWISPTPEPVVIRMWNDQYVKMIDQRGHGGDVVSLALNITSTVRYEAELRAAREKAE
AANRAKSAFLANMSHEIRTPMNGVVGMAELLCDTALDEEQQLYASTIKNSGEALLVIINDVLDYSKIEAE
KMMLHPEPFDLERCIHEVAMLMQPIVRDKGLTLLVDYDLFLPTLFVGDPGRVRQVLTNLLGNAVKFTTKG
HILIRVTGVPDPATGRCAIHVAIEDTGIGIPREKLAHIFGEFNQVENERNRQFDGTGLGLAISQRLIQMM
GGTVWVESEEGRGSCFGFRVTLPMSEEAQPVLPNLPGRLQHVLIVDDLAVNRAILEKQLAQLGVRVTCCA
SGAQALEKMSDCVDLVLSDHNMPEMDGLELAEALRGAGWSDLPIFLLSSNPGMAHADPAKRHVQGILQKP
IPRAELFARLSDMRTEITSVQDPAAVSAPVTKPAQDAPGEPTERRQMRVLAAEDNRTNQLVFRKMVKTLD
IDLRFANNGLEAVEIWQDFQPDLIFMDISMPKMDGKQATGEIRRLEAGTGRHVPIVALTAHAMAGDAEGI
LAAGLDQYLTKPLRKALIHQHIAEACPAGALPVEPESGE
>gi|56695058|ref|YP_165405.1| PAN domain-containing protein [Ruegeria pomeroyi DSS-3]
MRRFGFLAILSLQLAFFGVSGLSAQEAAPGFRYLATRDMDFYGEDLDALFDTDLQSCIRACSANNACNAF
TFNARSNACFPKRGVSEQTPYQGALSAVKLPSPAAVRDRARQQAARLAFLPDRDLTRAVAQARDLGLRYA
AGGMELDQVIAAMRNAGEGAQAAGWAGLAVSLSDRADLWAEYARLLLSVRSDDSSIKRDHARRAVSAAIN
AYLRADRPGAEVSALALLAQALERDGRGRDMVPVLRLASDIQPREDVLAALDRAIGKYGFRVVETTVESD
SAQPRICAQFSDPLARSGVDYEPFVHSPEGDLVVQADGNQLCLDGVEHGKRYRITLRAGLPAGSGEALWK
DVTLTHYVRDRSPAVRFPGRSYVLPKSADAAIPVETVNATTLDLILRRVSDRNLLRAVQEGYFARPLSYW
EDEHFASDIAQEVWTGSAEVASTLNRDMTTRLPLAEAISGQAAGIYTLTARVPGADPYDNPGATQWFVLS
DLGLSSISGNDGLHVSVRGLSDAAPRAAVDLTLISRANAVLGRVQTDAQGLARFEPGLTRGTGAAAPALI
LATAGDTDLGFLSLIDPAFDLSDRGVEGRKPAGPVDVFLTTDRGAYRAGETIHATALSRDGTARAIDGLP
LTAILTRPDGVEYGRKVSDGGVAGGHVFALTTGASAPRGTWRLDIKADPDGPALASQTLLVEDFLPERID
FDLALPDAPILPGDSPPLSIEARYLFGAPGADLSIEGQVQLRAADQIAGWPGYRFGRHDAGLQTRTSHFG
DARTDAAGNARLAVEIPQIDAEGKPLEAVVTARLADGAARPVERRISVPVSPATPVIGIKPLFEDVVSEG
TEAGFQVIGLTPDLTPQPMRIKWTLNRVETRYQWYQLYGNWNWEPVTRRTRIATGEADLGSDPLSLSQPV
EWGEYELLVERLDGAYVASSADFYAGWYQAADAAATPDRLELSLDKDSYRPGDTARLRIVPRMAGTALVT
VLSDRVIARQAVEVAAGESVIPLTVTEDWGTGAYVTATVIRPMDVAAGQNPARALGLAHATIEPVGKALT
VAIDAPEVAKPRATQPVRLTVAGAQAGDEVWLTLAAVDLGILNLTGFQSPDPQGHYFGQRRLGVEMRDVY
GRLIDGMNGAMGIVRSGGDADNGLRMQSPPPTQDLMAVFSGPVQVGADGGVSVDVPLPAFNGTVRLMAVA
WSDQAVGQAERDMIVRDPVVVTATVPRFLAPGDSSRLRLEVVHADGPPGEMALKLASAPGLQLGAAPDRF
TLTEGGKAVFEVPVTATALGDPVLTVELETPGGQELRQVLRLPVRANDPVVAQTRRFALGAGDSFLFSRD
VFTGLRPGSARAILSAGPLARFDAPGLLGVLDRYPYGCTEQVTSQAMPLLYLGAVAQAAGLGTGPQVAER
IDAAIRRILTRQSANGAFGLWRAESGDFWLDAYASDFLSRARAEGYALPDRAFAMAMDNLRNRLNYAPDF
DEGGEDIAYALMVLAREGAAAMGDLRYYADVKADAFTTPLGAAQLGSALAMYGDQTRADAMFARAARMVA
GQRPEAPVWRADYGTSLRDAAGLLTLAAEAGSAVIDRDSLISRISQPAGEMSTQEAAWSLLAAQALVKQP
EQSGLRVNGAAVDGPFVQVLAGTSDEVLNITAVDGGATDITLTMLGVPEVPLPAGGTGYTITRARYTMDG
APIQRDAFAIGERFVTVLTVTPFEASGGRLMVNDPLPAGFEIDNPSLLRSGDVRALDWLSLDEASHTEFR
SDRFLAAVDLYGTRPVTLAYVTRAVSPGAFHHPAASVEDMYRPRYRARTDTGRIRVGQ
>gi|56695059|ref|YP_165406.1| hypothetical protein SPO0134 [Ruegeria pomeroyi DSS-3]
MSGREAVATAHWRRLDGEGSDRCTLSRVAQGWIMVGHAHWRDEGCDTTLSYDIRCAPDWRSLSADVAGER
GGRPLSMRIEATPMGWRMDDVLQPGTEDCSDLDLSFTPATNLMPIRRLGAFAGDELRVAAAWLMPDLDCV
ARLDQIYTRLPDGRVHYASAGFAADLDLHGSGFTTLYPGLWQGWVDDA
>gi|56695060|ref|YP_165407.1| penicillin-binding protein 1C [Ruegeria pomeroyi DSS-3]
MMPRPARWLMVLALVLWAGAALRDGANRWIDATQLPPVLTETGVEIRDRNGALLRAYQVGDGIWRLAPGA
VDSGFTRMLIRYEDKRFADHAGVDPLAMLRAAGQALWYRRPVSGGSTLTMQVARLIEDGPTGRWAGKLRQ
IRVALALERRLDKQRILALYLTHAPYGGNLEGVRAAALAWFGKEPHRLTPAQSALLVALPQAPEARRPDR
HPRAARAARDRVLHRMLAQGVLSGEAMQAALGEAIPQAQRPFPLLAPHLADRLRAADPAARRHDVTLDAG
LQSRFEDLLAKAALEAGGRLSAALMVVDHRSGEIFASVGSAGYSAERQGFVDMTRALRSPGSTLKPFVYG
LAFDQGLAHPDTLILDSPVMFGRYAPRNFDGEFRGELRVREALQLSLNIPVVRLTDDLGPVRLMAALRRG
GATPRLPGGTPGLAIALGGVGLTLQDLVQLYAGLAQGGQGPLLRHALGEAAQPAGRLFSPSAAWQVGDIL
AGLAPPPGARRGVLAYKTGTSYGHRDAWAVGFDGAHVIGVWLGRADGTPVPGAFGGDLAAPVLFEAFGRL
KPAFDPLPPPPPDTLILPTAELPLPLQRYRPRGAVFEVEPDAPQLLFPPDGAVLTTDGGPVTVKLRGGQA
PFTLLANGRPLATGIFVREFDVPSPGSGFATLIVLDARGRASRAELRLE
>gi|56695061|ref|YP_165408.1| hypothetical protein SPO0136 [Ruegeria pomeroyi DSS-3]
MTGDLLLDPLVPLPLLIALAALSLAGIALALWRGLSGWALRGLAALVLLAALAGPVWQVEDRAPLSDIVL
MVEDQSASQGLSDRPDQTTSAADQLAASIESRPNTELRRIIVGDGEGDTGTQLMAALNEALNEEPRARIA
GILALSDGQVHDLDRAPALPAPMHLLLSGRATDWDRRLIVRNAPAFAIIGEPVTLSLRIEDSGAVPAGQG
ALAELQISVDGGPPERLTLPVGQDLELPVTLPHGGRNVVQFSVPVAEGELTDRNNTALIQMNGVRDRLRV
LLVSGQPHPGGRTWRNLLKSDSSVDLVHFTILRPPEKQDGVPVDELSLIAFPTRELFLEKIDDFDLIIFD
RYKRRGILPAIYLDNVANYVNRGGAVLVAAGPDFATADSIYRTPLSPVLPARPTARVIEEAYRAQVTEEG
ARHPVTAQLDSAGEWGRWLRQIEVTQDSGHVLMSGVEGRPLLVLDRVGEGRVALLATDHAWLWGRGYEGG
GPQLELLRRLAHWMMKEPELEEDALWAEAQGQTMRIIRRTLDTSVGSVTITRPDGGEDVLPMEEVSPGRF
EALYQGPEIGLYRLREGDQSAVIGLGPAAPREFEATIATAALMEPLITPLKSGIFRLEDGLPTIRNVREG
RPAAGRGWLGLTPRGAYETRDVRQTPLAPAWLVLLLASGFVIAGWLREGRR
>gi|56695062|ref|YP_165409.1| hypothetical protein SPO0137 [Ruegeria pomeroyi DSS-3]
MTVLGGIGFTAPWLLLALVALPILWLILRAVPPAPIRRLFPAVSLLLGLRDDESVSDRTPWWLLLLRVLA
VAAVILGLAGPVLNPRQQAEGDQPLLMVMEASWAGAARWTQQIDLLEARLTEAGRASRPVAVLRLGAPED
LVFQSAAAWRSRLPGLSPMPWQPGAAELAAATQAIAAQTGGFDTLWLSDGLDYAGRAELLDTLGARGAVT
VYQSPNPVLGLRPASFADGAVQLTLLRAEAGEERIQPVLALGPDPAGTVRVLNRSEARFASGETEAQLAL
ALPSELRARITRFELEGQRAAGAVALTDDSLARHEVALYAGRQDREGLELLSPLHYLTQVLAPNSDFIDG
ALLDVLPANPDIVVLADVVTLATLERSALTEWVEQGGILVRFAGPRMAASDIGRDNADPLLPVRLRSGGR
TVGGAMSWGEAKTLAPFGDTSPFYGLTIPDDVTVSTQVMAQPDPDLADRVIAALSDGTPLVTRKALGLGQ
VVLFHVTADAEWSSLPLSGLYVEMLDRLAVSSAAKSADAINMEGTVWSPLRVMDGFGQLDDAGNLPGIDG
TALATAPIGPEMRPGVYANDSRRLARNVLGADSVLTPATWPASVPVLGLSIAAEQPLGGWLLSLALVLLA
LDVAASLALSGRLGPLGRAAALLALLLHAPVAEAQLTEADMFARDATREMVLAHVLTGNRAVDDLALAGL
RGLSDTLFFRTSVEPAAPFSVDLERDELAFFPLLYWPVTPDQPQPSDAAYARLNTYLRLGGMILFDTRDA
DIARFGASSPNGRKLQQLAAPLDIPPLEPVPGDHVLTRTFYLLQDFPGRHASADIWVEAAPLDAEQIEGM
PFRNLNDGVTPVVIGGNDWAAAWAVDDNGRAMLPVGRGYGGERQRELAYRFGVNLVMHVLTGNYKSDQVH
VPALLDRLGQ
>gi|56695063|ref|YP_165410.1| hypothetical protein SPO0138 [Ruegeria pomeroyi DSS-3]
MSAAPALRHRAETAAAPLPPLLARAEYLAGTVLLGDHGRRRAGLGDDFWQYRPAQPGDSRRMIDHRRSAR
GDLQYVREREWQIAQSVMLWVDQGASMRFSSDKRLEAKADRARLLALAVAILLVRGGERVGLTGTTLPPR
RGNAQVHRLAEAWSRDAEADYAPPEHRAMIPHARALFVSDFLGDLKEVELALSKAADRGVRGVLMQVLDP
AEESFPYRGRTLFESVGGTLRHETLKAGELRERYLVRLAERRDALMALTRATGWQLGLHHTGDSAQSALL
WLWRALDGRVR
>gi|56695064|ref|YP_165411.1| MoxR family ATPase [Ruegeria pomeroyi DSS-3]
MSEPADLIGEIDALGIKLQEARASITRRFIGQERVVDLTLTALLCGGHALLIGLPGLGKTRLVETLSTVM
GLHGNRIQFTPDLMPADILGSEVLDTAEDGSRRFRFIPGPIFCQLLMADEINRASPRTQSALLQAMQEKT
VTVAGENRPLGTPFHVLATQNPIEQEGTYPLPEAQLDRFLVQIDVDYPDRATEREILLATTGVEEAEAHQ
VMSQADLLGAQVLLRRMPVGESVVEMILDLVRAFRPDEPGVSDRVRDTVAWGPGPRAAQALMLTVRARAL
LQGRLAPSPEDVLDMARPVLSHRMALNFAARARGDTLAGLIDETAASLTRTEAAA
>gi|56695065|ref|YP_165412.1| hypothetical protein SPO0140 [Ruegeria pomeroyi DSS-3]
MSGQKPVKPSADGLLASARAIKSKGPAPVHLWNPPFNGDIDMRIARDGTWFYQGTPINRPAMVRLFSSIL
KREEDRFYLVTPVEKVGIRVDDAPFVAVDVEVAGQGRKQVLTFTTHVGDSAVAGEGNPIRMAQDPATGEP
APYVHVRAGLEALIDRKSFYRLMDLGEIEDGWFGLWSSGSFFPLMTVEELERG
>gi|56695066|ref|YP_165413.1| DNA binding protein, putative [Ruegeria pomeroyi DSS-3]
MTENSDDILNRLPARLKEARRAQGLSLEAVANLSGVSRSMVSQIERGESSPTIATLWNLTRALQVDFAGL
LEAAEAADRIDTLRASEVPSIDNMGQGCRIRILSPPEDAGGHEVYDISFKPGGTLNSQPHARGTREQLTV
LDGAVRVTSGAAAQDLGPGDTARYAADIPHKISASGDGPARVFLIVKTA
>gi|56695067|ref|YP_165414.1| beta-ketothiolase [Ruegeria pomeroyi DSS-3]
MTDIVILDGARTAIGTFGGALASTAPIDLATVVTEAALERSGVEGGQIGHVVFGHVINTEPRDMYLSRVA
AMQAGIPNGTPAMNVNRLCGSGAQAIVSAVQSLMLGDAEFAVAGGAESMSRSPFIMTQARWGAKMGDVKS
LDMMLGALNCPFGTGHMGVTAENVADEHQISREQMDQFAMTSQERAAAAIAAGHFDGQITPVQVKVKRDM
VDFKVDEHPKATSVEVLAGLKPVFKKDGRVTAGNASGINDGAAAMVLATADAAEKAGLKPKARILGYAHA
GVRPEVMGIGPVPAVQNLLARTGLSIGDFDVIESNEAFAAQALAVNKELGLDAAKVNPNGGAIALGHPVG
ATGAIITLKTLYELERTGGSKGLITMCIGGGQGIAIAIELL
>gi|56695068|ref|YP_165415.1| iron-sulfur cluster-binding protein [Ruegeria pomeroyi DSS-3]
MARTNPHRPFVPDPEQAALAPGVSGNDINGLGETAFRRPRMVYWAPDPDDIPHGSLQRYFYRQSAKEPDF
ASRRAARQAVLDAPLPLLADTVVIRDPADWTAALTQFVDSGLCDLTGVAEMNPDWVFEGHEIPQSRVIMI
GVAHDYNVIATAPKPSAGLEVMTQYTRAAQAAKTIAGWLRQQGWQAEPLTGPMTGALAMIPPALACGFGE
LGKHGSIINPDLGASFRLSAVLSDAPFAPTPAQDHGIDGFCQNCHICQDACPPEALFAQKQTVRGARKWY
VDFDKCLPFFNQTHGCAICIAECPWSRPGIGPNLAAKLARKRNRDATG
>gi|56695069|ref|YP_165416.1| 2-polyprenylphenol 6-hydroxylase [Ruegeria pomeroyi DSS-3]
MRGPHNIIRLIRTGATLERNGAMAAVLDAFDAPRPLRILARALGKPFQWLGFKGDPSLPPATRALMAMGP
AYIKFGQVLSTRPDVVGQDLADQLRVLQDQLPPFPRAVAMREVEKELGRPLPEMFSEFSEPIAAASIAQV
HRARLADSGEDVAVKVLRPGIERAFRKDVDAFYFAARIVDLFAPGARRLRPMEVIEHFDGVVRGELDLRL
ESAAASEFADNTKEDAGFRLPPVRWSLSARRVMTLGWADGVPLGDNAALDAAGHNRRDLGERVLRLFLLH
ALRDGFFHADMHQGNLKVAADGDIIAYDFGIMGHIDEYTRRVYAEILFGFIRRDYKRVAEVHFEAGYVPA
TQDVDEFARALRAVGEPIFGMDATHISMGRLLSYLFEVTERFGMETRTELILLQRTMVVVEGVARSLDPH
INIWQVARPVVEDYIKQSIGPRAVLADLGKTALVVARFGPRLPDLVERALVAQSQPGLVEKPGRSAAFWP
ALGGALIGGGVVLLASLFI
>gi|56695070|ref|YP_165417.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE [Ruegeria pomeroyi DSS-3]
MRGTARPMSDRSDKTTHFGFETVPEHEKAGRVQGVFGSVASKYDVMNDVMSMGIHRVWKDAMMDWLAPRP
GQRLLDVAGGTGDISFRFLKRAGHGHATVLDLTEPMLVEGRKRAEAERMADSLDWVVGDAMALPFEDNTF
DVYTISFGIRNVTRPQEALNEAYRVLRPGGRLMVLEFSQLPNDGLQKLYDLYSFNVIPRMGQLIANDSAS
YQYLVESIRNFPNQETFLGMVQAAGFGNAKYRNLSMGIAALHSGWKI
>gi|56695071|ref|YP_165418.1| formamidopyrimidine-DNA glycosylase [Ruegeria pomeroyi DSS-3]
MPELPEVETVRRGLAPAMEGAVIARAEVNRPDLRWPFPDRMAERLTGQRVERLRRRSKYILADLSGGETL
LIHLGMSGRMTVSGDPLGQFVHDHPAAQKHDHVVFHMDNGARITFNDPRRFGAMDLMATATADEHKLLMV
LGPEPLGNDFHEDYLVAALKGRNTPVKSALLDQGIVAGLGNIYVCEALFRAGVSPRRKAGQIAAARVSAL
VPIIRQVLSEAIEAGGSSLKDFRQADGELGYFQHSFDVYGREGEPCRRAGCDGTVQRITQSGRSSFYCAQ
CQR
>gi|56695072|ref|YP_165419.1| enoyl-CoA hydratase [Ruegeria pomeroyi DSS-3]
MAFETIIVEVEDHVALIRLNRPDALNALNTQLLGELCTALEEADGNDKVRCIVITGSDKAFAAGADIREM
SQKTYVEVYSENLFAAANDRVSAIRKPIIAAVAGYALGGGCELAMLCDFIIAADTAKFGQPEINLGVIAG
IGGTQRLTRLVGKSKSMDLNLTGRFMDAEEAERAGLVSRVVPAKKLVEEALSAAQKIAEKSMISAYAVKE
AVNRSYETTLSEGLLFERRVFHSMFATEDQKEGMAAFLEKRAAQFRDK
>gi|56695073|ref|YP_165420.1| 30S ribosomal protein S20 [Ruegeria pomeroyi DSS-3]
MANSPQAAKRARQNEKRFAINKARRSRIRTFLRKVEEAIASGDKDAATAALRAAQPELMRGVSKGVFHKN
TASRKMSRLSSRVKALG
>gi|56695074|ref|YP_165421.1| chromosomal replication initiation protein [Ruegeria pomeroyi DSS-3]
MTQEKWGLLCQKLLKTVGQNNFTTWIEPLEFQALENGVAVFTVPTNFMGNYVSQNFSDLILYELNNAGEA
VQRLAFRVAANSPMRPARAARPAAAAAAAAAAVEAPQVSAPRATDTSDVLDGLQAAPLDPRFTFDSFVVG
KPNELAHAAARRVSEGGPVTFNPLVLYGGVGLGKTHLMHAIAWELKVKRPELNVLYLSAEQFMYRFVQAL
RERRMMDFKHLFRSVDVLMVDDVQFIAGKDSTQEEFFHTFNALVDQNKQIIISADRAPGEIKDLEDRVKS
RLQCGLVVDLHPTDYELRLGILQTKVQMYRTTYPDLVIADGVLEFLAHRISTNVRVLEGALTRLFAFASL
VGREIDMELTQDCLADVLRASERKITVEEIQRKVSDYYNIRLSDIIGPKRLRSYARPRQVAMYLCKQLTS
RSLPEIGRRFGGRDHTTVMHGVKRIEELKLTDGQIAEDVEMLRRALEA
>gi|56695075|ref|YP_165422.1| DNA polymerase III subunit beta [Ruegeria pomeroyi DSS-3]
MKISIERGALLKAVAQAQSVVERRNTIPILANVLIEAEGEGAQFRATDLDIEVVDKAPAMIERAGATTVS
ATTLHEIVRKLPDGALVTLTADAAAGRLTVEAGRSNFSLATLPREDFPVMASSEYQSNFTANAAVLRRLF
DKSKFAISTEETRYYLNGVYMHVADGDGGKVLRCVATDGHRLARIDADLPAGATDMPGVIVPRKTVGELR
KLLDDDEMDIAVSVSETKVRFATPDITLTSKVIDGTFPDYTRVIPQANTRRLEVDASEFAKAVDRVATVS
SERSRAVKLQLDEDKLVLSVNAPDSGAAEEELAVAYSDERLEIGFNAKYLLEIASQVDRENAVFLFNSSG
DPTLMREGNDQSAVYVVMPMRV
>gi|56695076|ref|YP_165423.1| recombination protein F [Ruegeria pomeroyi DSS-3]
MALALTAITISHFRSHRLLRLSLDERPVAIHGPNGAGKTNILEAVSMFSPGRGMRRASAAEMTRRPEVLG
WKLSAELVAGHQRHEIETWSEGGAARQVRIDDKAASQVALGRLVRMVWLVPSMDRLWIEGPEGRRRFLDR
MTMSFEPDHAEAVLVYEKAMRERNRLLREQVRDAHWYLALETQMAAAGHRIHAARQSTLTALAAAQTQAE
TSFPTAELELIQTEGALPESEGDLREALAESRFRDLAAGRTLVGPHRSDLYGVYAAKGVPASDCSTGEQK
ALLVSLILANARALARQVGAPPVLLLDEIAAHLDAGRRAALYDEICALGAQAWMTGTGPELFSELGARAQ
TIALCERDGQSEVVET
>gi|56695077|ref|YP_165424.1| amino acid transporter LysE [Ruegeria pomeroyi DSS-3]
MTLSAVDLALYAGAVFVLFLTPGPVWLALTARTLSGGFQAAWPLTLGVVVGDSLWPVLAVLGIGWITAAS
TQIALALKVVAVLVFVTLGIVTIRNADRTIASDSRLTRPGIWAGFLAGLVVILGNPKAVLFYMGILPGFF
DLSDITTIDLVAIVAVSQVVPLVGNLMLAAFVDRVRRVLSSPRALRRMNLTAGGMLIVVGLILPFT
>gi|56695078|ref|YP_165425.1| TetR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MTRPPQKRRLETRARLLAEAARLVEAQGYAGLRVEDVVEAAGVAKGTLFSHFTDKDGLLAVLIGAEVMRL
IDGMETAGPPDDLPQLMHRLAPLLDFIASDRVIFDLLLRYSGSTGAERNEVVADGFYRQIDLWAGWIAGM
QAAGTVRGDHPPALLAEGIQAFLNQIIAIRFCQGGQATGTPAGALYPFLAAWLIT
>gi|56695079|ref|YP_165426.1| quinone family NAD(P)H dehydrogenase [Ruegeria pomeroyi DSS-3]
MSTRKIIVLNGHPGQMSLSKSLSEAYAGAARESGHQVRYHDLSQMRFDMDYGEGGYKNTKPLEPELEAFL
ADLEWAEHVVLATPLWWGAIPAKLKGLFDRALLPGRAFDSRNTNFLGLPAPLLKGRTARVLMTSDTPAML
LGLFYSNAIKKVLARQILGFVGIKPARFSTFAPATGAEGDRVRKWLRKAAQMGAKAA
>gi|56695080|ref|YP_165427.1| DNA gyrase subunit B [Ruegeria pomeroyi DSS-3]
MSEIEQPGNEYGADSIKVLKGLEAVRKRPGMYIGDTDDGSGLHHMVYEVVDNGIDEALAGHADHVTVKIH
ADSSVSVADNGRGIPVDIHAEEGVSAAEVIMTQLHAGGKFDSNSYKVSGGLHGVGVSVVNALSDWLELRI
WRHGKEHVARFERGDTVEHLRVVGECGDRTGTEVRFLASTTTFSNLDYVFETLEKRLRELAFLNSGVRII
LIDERPAERIETELFYEGGVREFVKYLDRSKSPVMPAPIYFKGERDDIGVEIAMWWNDSYHETVLPFTNN
IPQRDGGTHVAGFRGALTRTINNYAQSSGIAKREKINFTGDDAREGLTCVLSVKVPDPKFSSQTKDKLVS
SEVRPAVENLVNEKLAEWFEENPNVAKQIVGKIIEAALAREAARKARELTRRKTAMDVNYLAGKLKDCSE
KDPSKTEVFLVEGDSAGGSAQTGRDRRTQAVLPLRGKILNVERARFDRMLGSQEIGNLVMALGTGIGRDE
FNISKLRYHKIVIMTDADVDGAHIRTLLLTFFYRQMPELIEGGYLYIAQPPLYKVARGKSEVYLKDQAAL
DDYLIHQGVEGAVLKLGNGEEIVGQDLTRVVEEARQLKRVLDAFPTHYPRHIMEQAAVAGAFVAGAVDAD
LQGVADKVAARLDLIALEYERGWLGRITQDHGIRLARILRGVEEVRTLDGPMLRSGEARKTGSFTRSLQE
IYTQPAMLVRRDRTQAIHGPLTLLKAILDEGEKGLTLQRYKGLGEMNPEQLWETTLDPDARTLLQVRVND
MVEADDIFTKLMGDSVEPRREFIQQNALSVENLDF
>gi|56695081|ref|YP_165428.1| transcriptional regulator RtcR [Ruegeria pomeroyi DSS-3]
MRNVVIGFLGTQLDSGKRKRWKPSVSLCNQPDFPVDRLELLYDQKFLRLAENVRREIEVTSPKTEVLLRQ
LNLSDPWDFQEVYGKLFDLARDYGFDEDRERYFVHLTTGTHVAQICWFLLTESRHVPAKLAQTGPPRDEK
DGPGKLDIIDLDLSRYNALQQRFDLLAREYSDLLKGGIETKSAAYNAVIDRIELVASSSDAPILLLGDSG
TGKTELAQRIYELKLQRRRVKGRLVQINCATLRGSSALATLFGQRRSHTGQAGSERSGLLHEASGGVLFL
DEVDELGLDEQAALLHAIETGRYYPLGSDHEVTSRFQVIAGTSRDPVHLTAEGRFRPDLLARLNMWSFRL
PALRDRREDIEANLIFELARAERELGTQVGFNTDARDLFLRFARDPATLWPGNFRDFGSAIRRLCTLAPR
GRITRAMVEEEIKGLRTGWQRAAGDGDHRLLIGILGNQAAEIDPFDRVQLAEVIRVCRTSASLSEAGRRL
FAVSRTQRRTTNDADRLRKYLQRFGLEWAMIAE
>gi|56695082|ref|YP_165429.1| TROVE domain-containing protein [Ruegeria pomeroyi DSS-3]
MPNSAISVIYAQKQHTRLISCFSRRFPNPMSQSPRTKEDEREMANKSVFASIKGRLLPKATTRNAEGAPA
YAYSDAHALAQVAVTGTFGGMFYTDPRDELEYVVDLAEAVEPCFLAQAAIYARQSGYMKDMPAVLLAVLA
RRDPALFRRVFGRVVDNGKMLRTFVQVMRSGQTGRKSLGSAPKAMVQNWLNTASDRALLAANIGNDPSLA
DVIRMVHPKPETKEREALFAWIVGRPCNLALLPQALQDWLAFKAGAKGPVPDVPFQMLTQLDLTPQHWAR
IARKGSWQMVRQNLNTFQRHGVFNVAKNVAHVAALLRDPEAIGKARAFPYQLMVAAQNLSADMPREIVEA
LHDAMEIAVRNVPKIDGQVVVCPDVSGSMTCAVTGYRPGATSVVRHVDVAALVAAAFSRVNRGCQVLPFD
FEVRDVRLEPRDTILTNAERLAALGGGGTTCSAPLKWLNDRGRSPDLVVFVSDNQSWVDARAGGQGTAML
AEWEKVKRRNPKARLVCIDIAPYGTSQVQTREDVLNIGGFSDAVFDQIAGFAAGRTGPDHWVGEIEKIEL
>gi|56695083|ref|YP_165430.1| hypothetical protein SPO0160 [Ruegeria pomeroyi DSS-3]
MTEESKTYDPVTGEHLKDWGHRPGKQFPALLARANEMRAAGLGLVRIRMELEVEIPPAPVTHDLRAPGEV
PFHENIDIAGPDEEDNVQKVRETMTALMRTPTIEAGAIMPDACPAGPVGTIPVGGVAAARNAIHPGMHSA
DICCSVMITDLGHADPKTVLDAAQSVTHFGPGGRPQGNRFTVSLDLLDAFRANAFLSNPKALRMAQEHLG
TQGDGNHFLFVGRSRKTGRTAIVTHHGSRGPGAVLYKLGMEVAERFRRELSPGTAKQNAWIPADTDEGRD
YWAALQLIRKWTKANHNAIHQATVEAARAEAGDRFWNEHNFVFRRGDIYLHGKGATPAWGDYAADATGLT
LIPLNMSEPVLVVRGKDAARGLGFSPHGAGRNFSRSEHKRRMGKMTPEAMLKAETEGLDIRFHAGGVDAS
ELPSSYKKAGSVVDQIRSYDLAEIEDYIDPYGCIMAGEVPPFWAKKKTRR
>gi|56695084|ref|YP_165431.1| LuxR family DNA-binding response regulator [Ruegeria pomeroyi DSS-3]
MRILLADDHALVRDTISVYLQSEGDAEVVAVPDLGAAMRAADTEGPFDLILLDFNMPGMNGLDGLRAAIR
HAPDTPVALLSGSAPNRVAQEAVDAGAAGFVPKTLAAKSLLHAVRFMIAGEVFVPSTVLQAPEAPSDGGL
TATLSRREKQVLGGLCRGLPNKEIARELDLQEVTIKLHVRTLCKKLNAKNRTQAAMIARDAGFE
>gi|56695085|ref|YP_165432.1| hypothetical protein SPO0162 [Ruegeria pomeroyi DSS-3]
MRMRAIGRVPILVAGLLLASVGQVAKAGEEVLAVTGSDGSAISFDLDALRALPVSEIRTSTIWTDGIQVF
QGVSLRDLLDHVDAVEGTITAVALNDYLIDIPTSDATRPGPVVAYLRNGEQMSVRDKGPLWIIYPYDDNP
DYNTEEYYARSIWQLIRLEVPK
>gi|56695086|ref|YP_165433.1| sensory box histidine kinase/response regulator [Ruegeria pomeroyi DSS-3]
MKTGFWIALVLVLIGYSALLGREAMVRLDTLSTAASDDIRWNMSQLEVELLRLQSAALKARDGGQGDIQQ
LRTRFDIFYSRTQIVLRGALYDQAREIPEVQERLQSLRAFLAESVPIIDAPEPILADRLPELAHLVEQVS
PEVRDLALTIVNTSARAADTQRLKVSETLRRLALSVLGLLVALTIVALLLLRLYRSSQVVSAEKEAVKSR
FEAAVKSALDAVLVVDTEGHIIEFNGGAEAMFGYSRSEALGQPMSDLIIPPHYRARHEEGMRRFREHGTS
RVVGRGHLRLEGMRKSGEVFPIELSISLAETSDQLVFISFLRDITNRLKTEDDLREARDTAQAGAQAKAQ
LLTVMSHEMRTPLNGILGSLDLMERDELSPKQVRLVRAIRVSGELLLTQVNRVLDLSRLESGMIEFPKEP
FALLPMVRRLTESLTAAAEERGNRLQTTLVGDDPGVVLGNRIALQQALVNLLGNAIKFTRNGEISLEVER
LNDDRMIEFRISDTGLGIPAKDIERIFDEFVTIDTAYARENPGTGLGLSITRRLVWAMGGEIEVESIEHE
GSLFLIRLPLEPGEAVELASEKERGQPEPGPLKGKRVLVIEDNDINRMLLLDMLEEFGCQVVLARDGFEG
VAAAKSARYDLLLVDISMPGKDGLETLREIRAQEGPNGPVRAIAITANVRDEDKERFAAAGFDGFLAKPI
SMLQLQEMLSGLLLRPEAEAERSTAREFIRRFGMAEYQRHLLGMVDALHAVCDDLANTELSETLKARVHE
QAGSAAILGRADLHSLLQEIEATDAADWPARRGGMLDRLKTELARTRAVSLGG
>gi|56695087|ref|YP_165434.1| oxidoreductase, FMN-binding/pyridine nucleotide-disulfide oxidoreductase [Ruegeria pomeroyi DSS-3]
MSFKHVFAPVQLRHKQLKNRIVFGAHTTNMAHDGLPGDQHLAYYLERALGGAAMIVVEPMPVHAAAVLTR
GNFRHSSDDVIPHFARITQACKAHGTVMIQQLYHVGAHGDWDNSWHANWSPSGGPSYHDNDGSHAMTEDE
IEETIQGFVDAAVRCQKSGFDGVEVWAAYHCLLDQFWTPFSNQRSDQWGGSLENRTRLSREIMARIRAAC
GPDFIIGLSVNDDSDKPVCLSHDEMVEIVALHDAQGLMDYVTVGAGSYFNFYKLLPSFQYAENLGADLAE
RLKQANLTALVTAEANIRTPDNANTVLGAGRADLVSIVRAQIADPHLVAKAERGAPEDIRGCLSCNQQCW
GRRGRDYYISCLVNPSAGHEYLWGGDRFTPAQTPKTVLVVGGGPAGLECARVAAERGHRVILAEAGPELG
GQFRLAGLQPRRAQITDLIGWYERQLRQLQVEIRHNTYLDAQDVATIGADAVILATGSAPPETGFQKALP
QVTRLPGIERGQVWSIHDVMTRAARLGDHVVLLDEAGNWRGIGTAWHLAEKGHKVTIVTPDPMIGRELAR
SATDFPARATLAGLGVRFVTESALTGWSDAGAEVVSLLTGETEVLTADSLVLATANTPETGLAQELRAMG
IEATSIGDAAAPRLAAAAIHEGRKTGLAL
>gi|56695088|ref|YP_165435.1| pyrroline-5-carboxylate reductase, putative [Ruegeria pomeroyi DSS-3]
MRIGVIGTGTIATAVVHGIAGDGHAITVSERSAANAQALAAAYPNVRVASNQVVVEECDILTLGLMAEQA
PEILGPLPFRADQQVITLMAGATLEQVAQMVAPARAAAIMMPFPSIAQGGSPIMMQGDADLVAALFGARN
RIFAVRDAAEMAAYLCAQAVLSPVARMVDDAAGWLATRVSDPVQGEAFLRALVASSLADTDSASLIEALN
TPGGYNQRLRLHMEGAGMGDSLRAGLDALETGA
>gi|56695089|ref|YP_165436.1| N-methylproline demethylase, putative [Ruegeria pomeroyi DSS-3]
MSRDPLLQPFQLKHLTLKNRIMTTAHEPAYPEDGMPKQRYAAYHAERARAGVALAMTAGSAAVSRDSPPV
FNNILAYKDEVVPWIRQLTDACHDHGCAVMIQLTHLGRRTGWNKGEWLPSVSSSRHREPAHRAFPKLAED
WDIARIISDFADAAERMKEGGMDGIELQVYGHLLDQFWSPLTNDLDGPYGGQTLESRMKMPLDVLRAVRA
RVGDDFIVGLRYTADEAAEGGIGPEEGIEISKRLADTGMVDFLNVIRGRIHTDPAMTDVIPVQGMKSAPH
LDFAGEVKKATGMPTFHAARIPDVATARHAVASGLLDMVGMTRAHMADPHIVQKIVEGREDDIRPCVGAT
YCLDRIYQAGEALCIHNPATGRELTMPHTIPSAQTRKRVVVVGAGPAGLEAARVAAERGHHVTVFEAQPD
PGGQVRLTAQNPRRREMIGIIDWRMAQCAARDVEFRFNTWAEAADVTALNPDVVIVATGGLPNTELFETG
RENNLVVSAWDLISGDVKPAQNVLIYDESGDHPALMAAEVAANAGAKVEVMTPDRMFAPDIMGMNLVPYM
RALQDKDTTFTVTRRLLDVTRDGNQLRARIGTDYSSFTKDQTYDQVVVNYGTMPMADLYFELRPLSRNGG
EVDYDALIAGNPQTVETNLDGAFQLFRIGDAVSARNTHAAIYDALRLMKDI
>gi|56695090|ref|YP_165437.1| trimethylamine methyltransferase family protein [Ruegeria pomeroyi DSS-3]
MSEQTPLRSRRSRRASGKAGRSAEPGQNLHLRVPYITRKIPTYDLLGEESLDKIEATADRILAEIGIELR
DDEESMRLYKRAGAQVTELRADAWNIRFEPGMLREILKTAPARFTQHARNPANNVDIGGDAMVFAPAYGS
PFVMDMDNGRRYGTIQDFQNLIKLGQSSPWLHHSGGTICEPTDIPVNKRHLDMVYSHMRYSDRAFLGSIT
APERAADSVEMCRILFGADFVDQNCVIMGNFNTTSPLVIDGVTAAGIRTYAAAGQGSIHLPFLLGGAVSP
LTMAGAVAQCLAESMASSALTQLVRPGAPAILAGFLSSMSLRSGSPTFGTPEPALGSLVMGQLARRLNMP
LRCAGNFSTSKAPDGQAMQQAMMSMMSAVQGGANYILHSAGFVDGLLSMSYEKFVMDTDMCGALHSYLAG
IEVNEDTLGFDALAQNGPGEHLFGTDHTLRHYETAYWDSGLNDDQTHETWSEQGSADYAIRANKRWKDIL
NTYEAPVMDDATDEALREFIDRKKASMPDAWY
>gi|56695091|ref|YP_165438.1| TetR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MSLAPKPTGSESAWLDAAYELLTESGVEAVKIMPLAQKLGVSRTGFYWYFKDRETLLEAMIQRWEEKNTG
NLVARAEAYAESIVEAMFNLFDCWLDDGLFDARLDLAIRNWARNDPGLHQRLDQADQARQDAVAGMFLRF
GYPENQARVRSLTVMYTQVGYISMQIEEHPDIRIANMPDYVEVFTGVTPDQADVDRFLSRHAAKWRAAAN
QM
>gi|56695092|ref|YP_165439.1| Slt family transglycosylase [Ruegeria pomeroyi DSS-3]
MPLNLITRFAAFVWLSVLFAAAPALAKLDPGVSSLCDQAARSAANRHGVPLDVLRAITRVETGRRSDGQL
APWPWTVNMEGTGHWFPTEFAARKFVFERFKSGARSFDVGCFQINYRWHSQGFSSIEEMFDPERNADYAA
RFLNDLFGELGSWSAAAGAYHSRTQSLADAYASRFDRTRAALGEGPMPNPHRTPDTGGAQPLFARQEAPP
GPARLGSLFATGSGARPFISFN
>gi|56695093|ref|YP_165440.1| flagellar biosynthesis protein FlhA [Ruegeria pomeroyi DSS-3]
MPKLTTETLFSPTVLLAIALMAIIVMMILPMPAWVLDIGLAASFALAILIFTLTLFIERPLDFSAFPTIL
LASLMLRLSLNVSSTKLIIGQGHTGPNAAGDVIEGFAQFVMGGSVFLGLVVFGVLLIVNFMVITKGAARM
AEVGARFALDGMPGKQLAIDSDMSAGAIDHQEAKARRELEQQETTFFGSLDGASKFVKGDAIAGLLITLL
NLVMGLIMGVVVHGMPMSAAFETYAILTVGDGLVSQIPAVIISIASALLLARGGTQGATDNALFAQLGKH
PAALATVALLMVLFALVPGLPFLPFISGGAVLGYAAWRMRLKQKQEAESAARITEEQTPVARQGIGDILD
LDDVHLEFAPDLVGMALDPGTGLDARIANMRTHVASIYGLILPDIRLTDQAELPQGTYVIKVQGVEQVRG
VLHPDLVLALMTDHPDALPAGEDVTEPVYGAPARWILPKDQEAAALSGATIVSPPEILATHLLEVIKQNF
ARLLTLKSLRRLLSEMTRLSDPVRSEANQKLLDELIPDKVPIDTLHAVLRLLLEERVSIRNMPLILEAVA
EARLATTQPEAICEHVRQRLGFQLVAEMKRADGSIPLVQLAPEWEDAFATYQVDGAGGGLDIALPPDLFN
KLADGVAKRLSQTAGQGIFAALVTSTRRRRFLRTILRARGIPNPVLSFEEIGMEARPALVGQVPA
>gi|56695094|ref|YP_165441.1| flagellar biosynthetic protein FliR [Ruegeria pomeroyi DSS-3]
MIALPPELLALISGELWQLFAVFLRVSALVSVLPAFGEQSIPMRVRLGVAAAFAVIVAPATPQAPEITNV
LQFAMLAGTEALAGLVMGLGIRLFAMALQVAGMIAAQATSLSQLLGNAVAEPTPAMGHLLMMDGLALAVM
SGLHVRVAEFLIHSYTIFPIGKLPHPGDLSQWGVAQIGRMFALAFALAAPFVIASLIYNLALGAINRAMP
QLMVAFVGAPVITFGGMALLLVGTPLLLSVWLDALWSFFQDPVGARP
>gi|56695095|ref|YP_165442.1| flagellar biosynthesis protein FlhB [Ruegeria pomeroyi DSS-3]
MSGQDDDSDKSYEPTPQKLQKAREKGEVAKSADLSVVAAYAGLLLALSALGAASITKLGTALTVLIGQAD
GLSRLVFEGRAVGPVGGLMGTVGASILPWFLVPAAAVILSVVAQRAFVMAPSKLVPKISRISILQNAKNK
FGRGGLFEFAKSFVKLLLYSVCLGFFIKLNLSDIVSSAGMEARQSVLLMARLLMRFMFLVATVALVIGAI
DYLWQHAEHIRKNMMSRKELMDETKDAEGDPHMKQKRRQKGQEIAMNQMLADVPGADVVIVNPTHYAVAL
KWSRLPGAAPVCVAKGVDEVAAAIRRSAAEAGVPIHSDPPTARALHAGVEIGQEISEEHYRPVAAAIRFA
EAMRKRAKGRAW
>gi|56695096|ref|YP_165443.1| hypothetical protein SPO0173 [Ruegeria pomeroyi DSS-3]
MVRHSILDQMTRVGEALYLREYERIRAVLEEEARIAAQIARLDDQVVRIRAEGSGDHGYRSVGADILWQS
WESRTRRQLNSDLARARAKRLSMMDDLKRAFGRKQAIAQIAQDDKSARAKARRKAQLDALTRDAALR
>gi|56695097|ref|YP_165444.1| hypothetical protein SPO0174 [Ruegeria pomeroyi DSS-3]
MLGKLLPVLFLVVGLGAGVGAGVFLGPKPSQDSAHASDQASDHGEEKPSKAKPGDQAKSEPSEDHDAEDS
GNEYVKMNKPFVVPLVHKDQISGLATVSLSLEVQPGFSENFYAKEPKLRDGFLQVLFDHANIGGFDGAFT
RPGNLDPLRVALLESAQKAFGDNIVSVLIVDIARQDSY
>gi|56695098|ref|YP_165445.1| flagellar basal body L-ring protein [Ruegeria pomeroyi DSS-3]
MMQKCLSPKTLIAALVVLSACGRADHLGKAPSFTPNTESPEHVAMLWPGLPLHTQPQRSVDRASLWSGGQ
NSLLGDQRAMKKGDILTVVIEIDEKAEISNDTNRSRSGSESLGVPHLLGLPQRIDEKLPEGASMSNAVAV
DSSSASGGKGSVKRKEKLTLRVAATVVDVLPNGVLSITGSQELRVNFELRELLVSGYVRPEDISRQNEIT
YDKIASARVSYGGRGQITDVQQPRYGQQVLDMVLPF
>gi|56695099|ref|YP_165446.1| flagellar basal body P-ring biosynthesis protein FlgA [Ruegeria pomeroyi DSS-3]
MRYLGPILALVLAQTAAAEVLVPTRTIRAKEIIGAEDLMLKSAEVPGSFTDPAEVIGQEARVALYAGRPI
RYADIGPPAIVDRNDLVTLFFDNGPLVITTEGRALGRGAAGDVIRVMNLTSRTTVSGQIRPNGSIEVK
>gi|56695100|ref|YP_165447.1| flagellar basal body rod protein FlgG [Ruegeria pomeroyi DSS-3]
MRALKIAATGMSAQQMRVETISNNLANMNTTGYNARRAEFADLHYQQIARAGTVNASDGTVLPTGVQLGL
GVRPAAVTVHLEQGALSATGNDLDLAIEGRGYFEVTLPSGQSAFTRDGSLKRSAEGLIVTSDGLSVVPEI
TIPSDARSISINAAGEVYAYFDDAAEGQLLGQVTLAGFTNAKGLEAIGSNLFKETEASGSPITGNPGEDG
LGTLRQGYLEDSSVDAVREVTELIEAQRGYEMNAKVISAVDQMMSATTQVR
>gi|56695101|ref|YP_165448.1| flagellar basal body rod protein FlgF [Ruegeria pomeroyi DSS-3]
MANNIANSATSGYRQQGLVFSEFVRGGLGTSSLSMARGQVRNTSQEQGVLTQTGGDFDLAIDGEGFFMLE
TPGGERLTRAGSFTPNAQGDLVNPDGYRLIDANGAPIFVPPDIDGVRIGPDGTISGAGRLLGQIGLFKPV
DPHGLIREGGVFFRADDGTEPIEGASIMQGFLEGSNVNAIDQVARLVEVQRAYELGQSFLQAEDERIRNA
VNSLLR
>gi|56695102|ref|YP_165449.1| flagellar biosynthetic protein FliQ [Ruegeria pomeroyi DSS-3]
MMSEGLFYDTVRQGLWIAVITSVPILSVALIAGLAVGLFQALTSIQEMTLTFVPKLAAIVIVFWISMGFM
TQTLVNYFTTTLIPLISGGV
>gi|56695103|ref|YP_165450.1| flagellar hook-basal body protein FliE [Ruegeria pomeroyi DSS-3]
MDIRSLSAAQAYASARPATQADPKDDSATQGLRGTFQDFAATLQHSEELAQSAMIGKADPHALVQALAQS
ELAVETAVTVRNKVVEAYQEILRMPV
>gi|56695104|ref|YP_165451.1| flagellar basal body rod protein FlgC [Ruegeria pomeroyi DSS-3]
MREAEMSEFSKSLSVTASALRAQATRLRHVSENISNADTPGYRRKTVPFEVERGRDDGVERVTTGRVKLD
RRQLPDIFDPSHPLADETGHYQGSNVDLMIEIADAREAQRSYEANLKLFDQARQMSASLMELLRK
>gi|56695105|ref|YP_165452.1| flagellar basal body rod protein FlgB [Ruegeria pomeroyi DSS-3]
MKLIEGEAPMFSDLNVFKMAYAMATHAGTRQAVIAQNMANADTPGYRERDIAPFAETFARETAGTAMQAS
RTSHLNGTAASAASWAPFETNAAGDPNRNNVSIEEQMLKAVEVKRQHDRALAIYKSSMNMLRVGLGRG
>gi|56695106|ref|YP_165453.1| H+-transporting two-sector ATPase, flagellum-specific [Ruegeria pomeroyi DSS-3]
MTAPDPLALKAEFDSLSLVRHVGRVTGVAGGVIQIQGLARQAQIGDRVELKRNFGPSLGGEVLQVEGSTI
NMLPDSAPEGVSLGNRVVLHPIPGFAPGRHWLGRVVDPFGRPLDGRPLMRGSKARDLMRAPPPAVQRKPL
GQRMATGLAALNTLLPIVRGQRVGLFAGSGVGKSSLLATLAKSMQADAVVVALIGERGREVNEFVAKALG
PEGLARSVIVAATSDQSALVRRRCAWAAMTVAESLRDEGLNVLYLADSITRFAEAHREISAAMGEAPALR
GYPPSVTPLITGLCERAGPGTEKQGDITGVFSVLVAGSDMDEPVADILRGVLDGHIVLNREIAERGRFPA
IDISRSVSRSLPDAATPEQNALIGEARRLIGAYEQSEVMIKAGLYSEGADPLLDQAVRVWPELDAFLARL
DPQGIEHSFSRLQLVLRRSKSGPRH
>gi|56695107|ref|YP_165454.1| hypothetical protein SPO0184 [Ruegeria pomeroyi DSS-3]
MLEGLMIGLGTAFSLTNILMVIGGCLIGTFIGMLPGLGPMSIIAIMIPVAITIGDPSAALILLAGVYYGA
IFGGSTSSILINAPGVASTVATSFDGYPLARQGKAGKALTVAAISSFCGGTIGAILLMVFAPALASVALL
FHSAEYFALMVVGLSAIAAFAGSGQVGKALLMTLLGLIMATVGEGALFNMPRFTMGVMDLQSGFGFITLA
MAMFALPEALYLVLDPSRSTQGGESGEIKDLRITRAEAKSIAPVIGRQSVQGFLIGVLPGAGATIASFLG
YAVERNIAPKAEQEEFGKGSLKGLAAPESANNAACTGSFVPLLTLGIPGSGTTAILLGALIALNVTPGPR
LMVDDPQIFWAVIISMYLGNLILLILNLPLIPYIAKILAVPRSFLIPFILFFTLMGAYIGQNNSTELLIL
VGLGVCATVLRFADYPLAPLLIGFILGSMLENNFARAMQLYDGLGFILERPMTVGLLVLAALLVILPSYR
ARRARLRAEGVADAD
>gi|56695108|ref|YP_165455.1| hypothetical protein SPO0185 [Ruegeria pomeroyi DSS-3]
MTSARGVKVNILFPLAGNIPGESPAGAAGAAPPCTLNPTEPETPMALDRWIALVILMICLAYGYAAFFTM
DAGLAPFMKRNPIWPSTFPKILSVLAVLAALSILLGLEKGAAAPKPMEINYRRLTEYKLGQALALLALMV
AYALLLRPLGFLLSTLAFLSIGSLILGERRFHILLPVAAAAAGLVWYLVQVVLGIFLSPWPAFMVNGG
>gi|56695109|ref|YP_165456.1| hypothetical protein SPO0186 [Ruegeria pomeroyi DSS-3]
MKTNLTRRVMMAAASAAFAFSTPSWAEPVVDSIHFLIPGGAGGGWDGTARGTGEALTAAGLAGTASYENM
SGGGGGKAIGYLIENAASNHGTLMVNSTPIIIRSLTGVFPQNFRDLTLVAGTIGDYAAIVVGKDSPVNSM
TDLLASFDADPSGTAIGGGSVPGGMDHLVAAMVMEAAGKDSLAVKYIAYDAGGKAMAALLSGEIAALSTG
FSEAVDLANAGEVKIIGVTSDDRVAAYPDAPTMKEQGIDTTFVNWRGFFGAPGLPEDRLAAYQEAIAKMY
DTPEWEAVRARNGWVNIHNSGDDFRAFLEKQEQQIGDLMRKLGFL
>gi|56695110|ref|YP_165457.1| DNA-binding response regulator [Ruegeria pomeroyi DSS-3]
MRFLLVEDNQSLASAILDRLRLDGHVVDHAANISLAEEFVITTDYDLILLDIMLPDGDGRSFLKMQRDHR
SETPVIVLTARSEVSDRVGVLDLGADDYLTKPFDFSELEARCRAVLRRRGGRSSNQKRIGGLTFDPLSGL
LEVCGLEVPLRNKELRLLEIFLAAPDQIFSKARLVDRLFSYDEEVSENAIEVYVGRLRKKIAGSGVEIQT
VRGLGYRIRLQ
>gi|56695111|ref|YP_165458.1| sensor histidine kinase [Ruegeria pomeroyi DSS-3]
MSDRLRSSGSIRRRLTIQLVGSAAVLAALLFLIVQTFTRELAEETHDRILLASATSIMDAVSVRAREVSV
DLPYAALSMLSNVSDDRVFYRVMLGAETLTGYDDLPVPRPEPRAIGAMFETLVYKGESVRMATTVRWLSR
NGVSTPLTISVAQTRTGQTERLADLTRTALLLGAGFFAVAVLLAVWTAQSSIRPLRELAGMVSRRGPTDL
RPVTRPVPAEMAPLVRSLNSFIDRLRLSLSRSEDFIAEAAHRVRTPLATVRTQAENTLHRIERPENRNAL
REMIRAIDESSRAAGQLLDHAMVSFRADSLERTPFDLTDLVAELVNRLRPVADLKDIELFLEISGPHVMS
GDPILVQNAVRNLLDNAIKYAPEESRVIVSLAGDATTHVLCIRDAAGGFHEDEIDGLTERFVRGRNAEGT
VGSGLGLTIAREVAEAHGGRLDIANTKDGAGACVCLHFPSA
>gi|56695112|ref|YP_165459.1| hypothetical protein SPO0189 [Ruegeria pomeroyi DSS-3]
MRLSALSLCLTLWAAIAGAFEVEEHALFGAADGRVLRILSTTDTHILRPLIDSFLDARPGVAVDYLSVSS
AEVMRAIVDEGERFDLVLSSAMDLQIKLANDGYTRPHRSAWTPLVPDWGNWRDHVFAFSQETASVVLSRA
AFADQDLPRTRQDLIDLLRSDPDRFQGRVGTYDVAVSGLGYLFATQDARTAESYWRLMEVLGGLQVKLYC
CSGEMIEAVAEGRIDMAYNVLGSYARARTDLAESILVIEPEEYTNMMMRTAVIMRDAAEPDLAGAFADHL
IAAAWSDPPAPDYPFPGPPATDRPEGASLRPISLGPGLLVFLDRLKRQRFLEEWRNAVQQE
>gi|56695113|ref|YP_165460.1| GMC family oxidoreductase [Ruegeria pomeroyi DSS-3]
MTFDYVIVGGGSAGSALAARLSEDPGRTVCLIEAGGRGDSLLIRAPAAVVAMLPGRPRINNWAYETVPQP
GLNGRRGYQPRGKALGGSSAINAMLYVRGHRRDYDEWAELGCDGWSWDEVLPYFRKSENNQRGADPMHGG
SGPLQVSDQQSPRPISRAFVEAGAAMQIRQSDDFNTGDNEGIGLYQVTQFHKPGHQGERCSAALAYLYPV
MGRPNLTVITRAHAKQVLFEGKRAIGVRYRKAGQSHTARAACEVILCGGAFNSPQMLQLSGVGRPEDIAP
HGIAMVHELPGVGQNLQDHLDFTLAYKSRDTDNFGLGLAGAVNLLRHARAWRRDGSGMIATPFAEGGAFF
KTDPGLERPDIQLHFVISIVDDHARKLHMGYGFSCHVCVLRPGSRGTVSLASADPLAAPVIDPQFLSDPA
DLSALMKGVRKTREMMRSQPLSGYIHKELFIDGEPDDAGLEQHIRARADTIYHPVGTCRMGRDEMAVVDP
QLRVHGVEGLRVVDASVMPRLIGGNTNAPTIMIAEKAADMIRAAAQA
>gi|56695114|ref|YP_165461.1| chemotaxis protein MotB [Ruegeria pomeroyi DSS-3]
MIMKVVEMGAHTNAAPIIIKKKKSGGGDGHHGGAWKVAYADFVTAMMAFFMLMWLLNATTEKQRKGLADY
FSDSIPINPVSGGGDGSFGGDSMFSENAMVTTGTGGVNRRRADADRSRGSTGVDRQGGEGEPLEEFKTLE
AALQGRGGESLVSEQLRKHIVTRVTDEGLIVELISTDESPLFETNSDRPTQLMKELAKVVVRAADMVSNG
IAVGGHIRAHPVVLARNPVWELSTARAERTRVLFEGLGMKEERIQRVTGHADRKLTDPNPMAARNDRIEI
IFLRS
>gi|56695115|ref|YP_165462.1| flagellar hook protein FlgE, putative [Ruegeria pomeroyi DSS-3]
MTISSSLNAGVAALSANASRLATISDNIANSSTYGYKRVETDFHALVNASGRGKYTAGGVRTTTQRLIDQ
RGSLVSTSNSTDLAVRGRGMLPVMRSSQLALPQQDMLLATTGSFRTDDEGYLKSEAGLVLMGWRANPDGS
IPNLPRDTSDGLVPVQLSVNQLSGAPTTEMVLRMNLPATATEAGSAGDTQPLSVEYFDNLGKSENVQIEL
VPTVPATGESNEWTMILRDTASGGAVVGEYTLTFSDARTDGGTLASVTATTGGAYDATTGSVVINVAGGP
MEINIGQLGASDGITQLSDTFAPVSITKDGTAVGTMSRVEVDENGFVYAFFDNGVSRRVFQIPLVDMPNP
NGLVALDSQTYEPSRESGTFFLWDAGDGPTGDLVSFAREESTTDVATELTAMIQTQRAYSSSAKVIQTVD
EMLQETTNIKR
>gi|56695116|ref|YP_165463.1| flagellar hook-associated protein FlgK [Ruegeria pomeroyi DSS-3]
MTISAALNSALSGLTAASRATGVASDNIANALTPGYARRSLEVAGNTIGGAGVRILGVVRNSDPVLLASR
RGADAAQGYADGVSGFHTRMARLVGNVNDPRSVPNLIAEFESSLIAAASTPSVQTRLDAVATAASELATA
LNAASNGLREARNDADRSIGQQVDRLNTVLQNVETLNGRIQSVKLSGGDSAPLLDQRQKLIDEVNTMIPV
NVVARDHGSVALFTDGGAILLDGPAAQLSFTPTLQTMPHMTLENGLLSGLELNGMPLRLSGPTSAIRGGS
LAAAFEVRDDLAIEAQQDLDAVARDLIERFEAPGLDPTAAPTDAGLFTDNGARFSASAQTGLAGRLKLNA
SVDPGQGGQSWRLRDGLGAAVPGAVGNAQQINAFHQALTATRTPSDPRFGTGDMTANQVGAALLSRVAQN
ESLATERLTFASASRTEMQKLELEQGVDTDVELQMLMQIEQAYAANARMIETVGEMMDTLLRL
>gi|56695117|ref|YP_165464.1| flagellar hook-associated protein FlgL family protein [Ruegeria pomeroyi DSS-3]
MAMNSLGDLAQNLMLRSYGARIRTEINTLTRELSTGKVADVTKRLRGDFSHLADMDRSLRRLSAFATANA
ETRLLASASQTSLGIVEQTVTDLSDSLLSVSLSNQAVSHAQAGVKAQGALETMISALNTSVGGRSLFAGV
ATDQTALASADTLMAGLRSALTGLSTPADIMQAAQDWFDDPAGFAATVYTGSDQSLGSTQVSEDTKVSLN
RRADDPAFRDAMRLASVAALAEDPALGLSSTTKTALFEQIGVGLLGARDGVVTLQAEIGDVEGRIEKAAT
RNGAAKSGLELARGELLSADPYETAIRLEAVQFQLESLYTTTVRNSRLSLVNFLR
>gi|56695118|ref|YP_165465.1| flagellar basal body P-ring protein [Ruegeria pomeroyi DSS-3]
MTLIRLLACLLFLPCLAQAGAVRLKDLVEFDGVRGNDLVGYGLVVGLNGTGDGLRNAPFTEEIMSNILER
LGVNVTGEDFRPKNVAAVFVTAALPPFARVGSQIDITVSAIGDSKSLLGGTLIMTPLNAADGQIYAVAQG
TVLAGGASAEGQAASVVQGVPTSGVIPAGARVEREIEFDLGSLTQLRLALREPDFTTAGRIETAVNSAFN
GRVAVMRDSGTVELDIAATQARSPAHVIGRIENILVEPERKARVVVDQRSGTIVMGADVRISRVAVSQGS
LTLRVEEAPIAVQPNPFADGDTVVVPRTNAEIEQEPGIKLAEVPESASLSDVVAGLNALGVSPRDMIDIL
KTIKAAGALHAEFVVR
>gi|56695119|ref|YP_165466.1| flagellar biosynthesis protein FliP [Ruegeria pomeroyi DSS-3]
MRRAAPVLAAITLLTGAMLAGPVAAQDISLSLGEGGSVSARTIQLILLITVLSLAPGLAIMITCFPFLVT
VLAILRQGIGLQQSPPNMLIVSLALFLTYFVMEPVFTEAWTTGIAPMMAEELALEPALEKAIAPFKAFMA
ARLDADTFFAMANLRPDGAALTATPEAPLSVLVPSFMLSEIARAFQIGFLVFLPFLIIDLVVAAVLMSMG
MMMVPPATVSLPFKLAFFVLADGWSLIASALVRSYMP
>gi|56695120|ref|YP_165467.1| flagellar motor switch protein FliN [Ruegeria pomeroyi DSS-3]
MRWTPSCIRPKRYRDMSDPQKPIEAKNPFNSVPIEITVSVGRARPLIRDLIGLGENAVLTLDKRVEDPVD
LYVGDRLVARGQLEELTGEQAGQLAVRLTEISDLASDLG
>gi|56695121|ref|YP_165468.1| ABC transporter, ATP-binding protein, flagellar, putative [Ruegeria pomeroyi DSS-3]
MTIAHLLEDFEINLMDPSRVRLMDEDTLEEYRLTAFEQGYSAGWDDAVSARSEEQGQLNATLARNLEDLS
FTYHEALSQMTQSLEPMFKSLIGTVLPQTMDRSYTHHIVEQLKSMAREQVAQPALLIVPSGVSATLKPIL
SEEFSFPVQLVEESSLPAGQACLRVGTAERDVDCSALLSSISDAMDSFLHQAKEVS
>gi|56695122|ref|YP_165469.1| flagellar MS-ring protein [Ruegeria pomeroyi DSS-3]
MQQIRSVWASLDKKKQFIVIGAALVVFLGVLGLTRMAGSPNMQLLYAGLESGSAGEVVRSLEQQGVPYEV
RGGSIYVPAARRDELRLTLASEGLPANGGRGYELLDSLSGFGTTSQMFDAAYWRAKEGELARTIVASPHV
AQARVHIANSSSNPFQRSIEPTASVSVVPSGSEVTPAQANAIRYLVASAVSGMVAEGVTVVDSNGNVIGT
PETPTSSTSEDRAQQMRERVLRLVEARVGRGNAIVEVSLDTVTETESIRERRFDPNGRVAISTDVEERSD
ASKNQTTDVTVASNLPDGDGAVGDESNSSTSATRERVNYEVSETETEILRTPGAIKRLSVAVLVNGLPGA
AQDGSSQFTPRPEEELAALRELVESAVGFNQDRGDVITLKSMELPNLEPQGTLASSSMLQGLTFDLMSLI
QMATLALVTLVLGLFVVRPILTKPAVSAPLLAVAPPPNQSGAQSAGPALTGEIDDGSPRQNQLPGAATQQ
RGTVPALVGSSGTPVDRLRAMIGDKQEETVEILRSWLEENEEKA
>gi|56695123|ref|YP_165470.1| flagellar basal body-associated protein FliL [Ruegeria pomeroyi DSS-3]
MTDATADEVEPEKKSGKKGLIVGLVLALVGAGGGFYATVSGLIPLGAQPAEEHGESGGDHGAVVPDALPN
VAYVDLQPIMVSLLGEGGQRHLRFHAQLEVPEQYLADVEKIRPRIVDVLNGYLRAIEISDLSDPLALTRL
RGHMQRRINIVAGEGRVKDVLVMEFVLN
>gi|56695124|ref|YP_165471.1| hypothetical protein SPO0201 [Ruegeria pomeroyi DSS-3]
MELIADILLVAGALGAGLYCFVLGRRLKRFNDLERGVGGAVAVLSSQVDELNRTLAAAREASDNSGAALG
DLTGRAEAVAQRLELMMASMHDVAPAQEVSAPPEVVRQEPKPARPDEAKPAPAGVMFMRHDRGNSGTTP
>gi|56695125|ref|YP_165472.1| hypothetical protein SPO0202 [Ruegeria pomeroyi DSS-3]
MKRKKSGTAGRGGALLLISVFMIGSAVIRIALEAGPALARGAVEEPVSDLARKDERATPAAADLHALLAT
LRQREQDLEQRESRVMERMRALEIAEVAIDRKLAELTQAEEALREAVATASVAAENDLSKLTEVYEKMKP
KESAALFEEMDATFAAGFLARMRPEAAADIMAGLSPKVAYTISVVLAGRNANVPTE
>gi|56695126|ref|YP_165473.1| flagellar motor protein MotA [Ruegeria pomeroyi DSS-3]
MIGILGIVVIFVMVFGGYLAAGGKMTIILKSLPFEMMMIGGAATGAFLISNDMGGVKHTLKDVGKVFKGP
KWKPEDYRDLLCLLFSLIRIARQNPVEVEQHIEDPASSALFSKYPRIQADHEAVDLICDTMRSASMNYDD
PHQVEEVLEKRMEANLHHAMHSSHALQTVADGLPALGIVAAVLGVIKTMGSIDQPPEVLGRLIGGALVGT
FLGVFLAYGLVGPFASKVKAVVEEDNHFYLLIKEVLVANLHNHNPAMCIEVGRQNTPSHIRPGFTDLEQA
LKDLKQDAA
>gi|56695127|ref|YP_165474.1| hypothetical protein SPO0204 [Ruegeria pomeroyi DSS-3]
MMQRILAVFLLLYLALPVAAAEVEVRSGEHQSFTRLVMRIPSQTKWTLENSTGSARLKVDLPDLKLDYGE
VFDRVPRKRLSELHQEKAGAPLELQFACDCEARAFVQGGTLLVIDIRDRPASDPPLVLPLVPERVLASGD
GVGADHPIEDREEDSGVAVNPRSQPSGGASQHTFLDFSAPMAGERTVENRLYSRIMRGVDQEVLALSPRE
ATDPDDQISAAQAALTETLAAGLGLPNLRVTTVVDRDLRAAREGTASPTIARKCVDDQKLAVPDWADDSP
FSTQYAVLRDGLYGEFDRINAQAALALVRFYIHFGFGDEAKVNLELLQPASPDRQLLASLAAAVEGRPAP
VDNPLAGLQGCDNDAAMWSVLSERHAPETTNTNAVLRSYGRLPVHLRAYLGPVLGEYLTDAGFVDAAQQL
VRAVERSDEGDKASIAVVEAKLAGLKNEPAVQEQKLTEVIEDASASTHAPLALIDLIEKRWVEGGDVTEQ
ELLLAASFVHEYRRSEIGPQIQTAYVIAQALSAQFDEAMKTLLDPGQDRKSQVWRETVDRIVKRITSHGD
DITFLRHVAMLESDLFLSVNTDTVTQVARRLNDLGFFEDALRYADRPQDRKSRPARVEIIARATLGTGRP
HRALLELETASGPEVERLRAQAMREAGALEQAAEALTRAGDLEAASRYLWLAGAEAPIDGGEETRFGGIH
LMGRALLEEREPSSGTPLAAAREMVDDSARVRDQIDSLLNRLP
>gi|56695128|ref|YP_165475.1| MmgE/PrpD family protein [Ruegeria pomeroyi DSS-3]
MTKQQSSLSPTFGRIAAFALDTRSEDIPAPVREAAALMMLDTLGVIAAASPLDAGVIARDSATLLYGSAD
PRYQARMMFDGRAVSLAGATYAAATQTDNLDGHDGYNPTKGHIGVVVIPTLATLAQHLPDLSGPEALAAV
TVGYEVAGRAGIALHATVSDYHTSGAWNCLGVAAMAARLRGQDPETLRQAMGIAEYHGPRSQMMREIATP
TMLHDGSGWGALVGTSAAILAERGFTGAPAITAEAEEAAPYWADLGRFWQMQHQYVKPYPICRWAHAAID
GVRQVMLDHRLSHADIAQVHVNSFHQAACLYQGLPPTTAIAQYALPFPVAVQIAYGRIGVEHVAGSGLTD
PLVAEIMQRITVSEDPRHSSRFPAGRWADVEITTTDGRVLKSGDINARGGPEAPMTRDELTDKFMDFAVP
CLGRARASALRDATLGLTAPDSRFCDVMDLLFDPIGQTIV
>gi|56695129|ref|YP_165476.1| LysR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MKHLPHLTFLRSFEAAARHLSFTAASEELHCTQSAVSNHVRSLEEFLGRPLFVRLPRTLALTELGEAYLP
SVRRALQEIDIATEALLSQRHRREVVVSCPTSLASLWLASVLRAFQREHPEVQVTVHGTVWADVEADVSD
ISITIHHVDDIPEGALQLWSETLALVCAPGFEVEGAPLTTPTQLGQARRIEVMGRPAYWDLVAQNFGLPG
FEMAGGPKTDVSTLAAELAAQGAGCAVLPRVLVRPYLERGALVEPFATEIANPWAYCARFKARTPAPSVR
LFRSWLLEAAARVGEGD
>gi|56695130|ref|YP_165477.1| aminomethyl transferase family protein [Ruegeria pomeroyi DSS-3]
MKTHAQAVVIGGGLVGCSILYHLAKLGWRDVVLLERDELTSGSTWHAAANIHGLHDNNNVTRIQHYTMNL
YKELEKETGQGCGVFQAGSLYLAQTEAREHQLRLQEAKARYYGLNFYEIDKDRAKELHPLAQFDDIRCIM
YEPDGGNVDPSGVTYAYAAGARAMGATIERFCPVIGTEPQPDGSWIVRTEKGDIHTQWVVNAAGLWGREV
AALAGITLPLQPTEHQYFVTEAIPEVAALGRRLPSIADRDGEYYFRQEGNGLLIGAYEKDMKFWAENGTP
LDFAHDLFPDDLDRIMENVIRATERVPVAATAGVKRVINGPMIWSPDSSALWGPVPELRNYFVCGGIIPG
FSQSGGLGLLAAQWMIEGEPQNDMFAWDLARFGDWADKTFTKARVQDQYTHRFAIHFPNEERSAGRPARV
RPAYEMQQQMGAVFGMNCGWEHPLWFADQPGVSETVGFTRQNWWEPVGREARMLREQVGVIDISNFANYE
IKGPGAHDWLDRLVANRVPTVEGRSCLTPLIGVRGGIAGDFTITMTGEDAYMMVGSGMAERYHQRFFNMV
DLPEGTTCEVATNRIAGYNVAGPRAREMLQRLTNADLSNAGFPFMRSATIEVAGVACLAIRVSFTGDLGC
ELHCAEGDQVRLYTALIAAAREVGGGPVGSRALGSLRIEKGYGSWGREYSPEYWPQEVGLDRLIKADKDF
LNKAAWLKIKDYPVREVLSVFEIEAVHGADASGGEPIFTPDGRPAGRVTSGAYGYSVGKSLAIGFVNPAV
AQPGDVLEVFILGKPHRAVLLAEPPFDPAGARLRG
>gi|56695131|ref|YP_165478.1| Na/Pi-cotransporter family protein [Ruegeria pomeroyi DSS-3]
MQEGFRRAGLKNTGLPPCPSLARLRVRGAQEMAGNLYFLIGGIGMFLLGMELMTAALRDTAGSRLRGVLT
RFTTTPLRGVMTGAAATAVVQSSSATTVMTVGFVGAGLMTMPQALGILYGANIGTTATGWLVSLLGFKLK
LGNLALLLLFPAALADLLARGPLARAGRTVAGLCLLLIGLDLMQSGASDLTAYLTPESLPGSGMGGLLLL
VGLGATVTIVMQSSSAAMALALVMLSGGAITLLQAAAIVIGMNIGTTFTAVLASTGGSVPMRQTALANLI
FNIVTSVLAFPLLLLLRPVFESAAGLGDDLSVLLLFHTGFNLVGTALFLPLTGCFAGLVARLLPERESDQ
LFVPDRSLLKDANAALLAAQSGTRTVAERMFSALGAGLAPAPDYRPIAALTPCVRALEDLRAFLSEIRLP
PDRAQDIETFSDILHQIDHLTRLLDRARQTGNIDTLLHDRLLRRSALGAGAALRRSGAALGALPEGMRLE
RLRHLIGARRKRHRRAMMLGEHVGLFSLDQVFAHTDAMRWLDRVLHHAERVAHYHRAAAARLPAADAPPR
AETG
>gi|56695132|ref|YP_165479.1| 3-isopropylmalate dehydrogenase [Ruegeria pomeroyi DSS-3]
MSNPSLLILPGDGIGPEVMAEVRKIIGWFGDKRGLNFDVSEDLVGGAAYDVHGVPLADETMAKAQEADAV
LLGAVGGPKYDDLDFSVKPERGLLRLRKEMDLFSNLRPAQCFDALADFSSLKKDIVAGLDIMIVRELTSG
VYFGEPRGIFEEGNERVGINTQRYTESEIERVARSAFELAMRRSKKLCSMEKANVMESGILWREVVTRVA
KDYPEVELSHMYADNGAMQLVRAPKQFDVILTDNLFGDILSDCAAMLTGSLGMLPSASLGAPMANGRPKA
LYEPVHGSAPDIAGQGKANPIACILSFAMALRYSFDQGAEADRLEAAVEQVLADGVRTADLLGTEGVTPV
STTEMGAAILAKLDASL
>gi|56695133|ref|YP_165480.1| LysR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MDELSDIGDWSLIQSFLAVAETGSLSAAARQLDRSQPTLGRHVQALEQALGLSLFDRHARGLKLSADGAR
ILPLAQQAHRAMTAISVTAAGQSQSLAGTVRITASVFASHHILPPILADIRAAEPAIELELVPSDTTENL
LFRAADIAVRMYRPRQVDIVARHIGDVPLCACAATSYLERKGRPTRAEDLLDFDLVGYDADPIIVKTMQA
LGWPVTRHSFAMRCDNQSAYWQLIRAGCGIGFGQRSIVAADPLVEVLPFELPVPPLEMWLAAPQAMRLTP
RIRRVWDLLAAGLLAAPL
>gi|56695134|ref|YP_165481.1| hypothetical protein SPO0212 [Ruegeria pomeroyi DSS-3]
MNAYLSMNSDWRASMTQTVLVLGASGRFGRNAAEAFGRAGWTVRQFDRKRDDLDAAARGADVIVNAWNPP
YPDWAATVPGLHARVIKTAQATGATVIIPGNVYVFGADTPAPWGPDSPHAATNPLGRIRIDMEAAYRASG
VRTILLRAGDFLDTCASGNWFDQVMIKRLDKGRFTYPGNPDIPHAWAYLPDLARATVTLSERRETLPVFC
DLTYPGYTMTGRQIATGLEQVTGRRVALKRMNWLPLHLARPVWSLAGSLLEMRYLWNTPHSLDGAAFAKV
LPEFVQTPFEQALASAIPARLLAAQVHPDQAVAAGL
>gi|56695135|ref|YP_165482.1| hypothetical protein SPO0213 [Ruegeria pomeroyi DSS-3]
MIRLAALVLCLLPVAAAAEVLRVATFNTELSRKGPGLMLRDIAGGRDTQVAAVVSVIASARPDILALQGL
DWDHEGRALDALAAQLAAAGWEMAHIFAAQPNSGRATDLDLDGDRRIGGPGDAQGYGRFTGQGGIAILSR
HPIAQAEIQDFSALRWRDLPGATLPESGGHAFPSEAAQAAQRLSSTGHWLVPIDTDMGRMVLLTYQAGPP
VFDGPEDRNGLRNRDETRFWQLLLDGVVGAMPDLPFVLAGGANLDPQDGEGYRGTIRALLADPRLQDPAP
ESSGAARAGPQGHAGPDARDTVDWPGIGRFRVDYVLPSTHWRVVGSGVVWPAPDDPSAGPVSEASRHRLV
WVDLSRQ
>gi|56695136|ref|YP_165483.1| hypothetical protein SPO0214 [Ruegeria pomeroyi DSS-3]
MIARISGAALRGFLVALVVVIPALYLPSAATTATEIVVLLAILAFVLTFAEYNSTFPSFIEFRDAPPLNR
MRFIALLTMITFLTLICKERVEPTNITALFSGFGLLIAHIADFPYSPVRLVVLMLPVGAAPELIYDVRVT
AAVAYVIALLTVVAFWFAVRVRGWPTANGAFNVWINLPLFDPTTGGDVVARLQRDGRINMVLGVLLPFLI
PAMIKMASDLFDPINLYSAQTLIWTMSAWAFLPASMIMRGLAMMRIAELIEEKRRRVYSNAEAMQTA
>gi|56695137|ref|YP_165484.1| isopropylmalate isomerase small subunit [Ruegeria pomeroyi DSS-3]
MEKFTKIQGIAAPMPLVNIDTDMIIPKVFLKSIQRTGFGKNLFDEMRYNRDGTEIPDFVLNKPQYRDAEI
LVAGDNFGCGSSREHAPWAIADFGIKCIISTSFADIFFNNSFKNGILPIVLPQEQVDILMKDAEKGANAR
MTVDLEAQEITTSDGEVIPFEVDAFKKHCLLNGLDDIGLTMEKAAAIDTFEAQAAQARPWV
>gi|56695138|ref|YP_165485.1| isopropylmalate isomerase large subunit [Ruegeria pomeroyi DSS-3]
MSPKTLYDKIWDAHLAHEAEDGTCLLYIDRHLVHEVTSPQAFEGLRMAGRKVRAPEKTIAVPDHNVPTTE
GREDPAQMTEESRIQVQALDKNAREFGVHYYPVDDIRQGIVHIVGPEQGWTLPGMTVVCGDSHTATHGAF
GALAHGIGTSEVEHVLATQTLIQKKSKNMKVEITGKLNPGVTAKDITLAVIGATGTAGGTGYVIEYCGEA
IRDLSMEGRMTVCNMAIEGGARAGLIAPDQTTFDYVKGRPHAPKGAQWEAALAWWKTLYSDDGAHFDKIV
TLKGEEIEPVVTWGTSPEDVLPITGVVPSPEDFTGGKVEAARRSIEYMGLTPGQKLTDIEIDTVFIGSCT
NGRIEDLRAVAEVVKGKKIKSGLRAMVVPGSGLVRAQAEEEGIADILKDAGFEWRLAGCSMCLAMNPDQL
APGERCAATSNRNFEGRQGYKGRTHLVSPAMAAAAALTGKLTDVRELI
>gi|56695139|ref|YP_165486.1| hypothetical protein SPO0217 [Ruegeria pomeroyi DSS-3]
MAGLSRQTQDLARLRADMYLDSMTPHDAPSMDLQDRARLRERFFGATRSVLARL
>gi|56695140|ref|YP_165487.1| mechanosensitive ion channel family protein [Ruegeria pomeroyi DSS-3]
MSEDILPATLDELIATLLTEGHRLVGLFLTPGWRQYQLLIIVLLIGAALLLSLLTRTHWEAWARSRAGWP
KWRLRTLVLLMRRLSLLYFVVLSWMTYLVMQQMTWPSRSYVIGVVATLATALLVIALVARAVRNRTIRLV
FRWSMWVYATLVALNLTDDVARFLDGISIEIGALHISVLGVMKAVLLVGALLVLVRLASQGASNALARND
DISPSMQVLLAKAVQVLLYGWVFIVAIRTLGFDLTGLAFLSGAIGVGIGFGLQKVVSNLISGIIILMDRS
IKPGDVISLGETFGWINALGARYVSVVTRDGREYLIPNEDLITSQVVNWSHSDQYVRLDLNFGTSYGDDP
HKVRAVSIAAARSVGRVLSGSGRDPVCHIVGFGDSSVDYVLRFWITDPTAGLTNIRGNVFLALWDAFQAE
GISIPFPQREVRMLENEGGLPQFAGQGGAD
>gi|56695141|ref|YP_165488.1| iojap-related protein [Ruegeria pomeroyi DSS-3]
MPAHAGAKMMAQGTYTSEQLLDRILTSLNDDKAEDLVQIDLRGKTSMGDYMVIASGRSTRQVSAMAEKLV
QRLKDEFGLNSKIEGKDAGDWVLIDTGDVIVHIFRPEVREFYQLEKMWMPQGAKTSAN
>gi|56695142|ref|YP_165489.1| hypothetical protein SPO0220 [Ruegeria pomeroyi DSS-3]
MRVSILAVGRLRTGPEKSLIDDYLTRFDRTGRALGLGPARVVEVEDKKNAGMGAEAALLRKALPAGAVLC
TLDERGKQLSSPDFADRMAGWRDTGRQDLALVIGGADGIDPSLRAEADFSISFGAMVWPHMLVRVMLAEQ
LYRAATILAGSPYHRV
>gi|56695143|ref|YP_165490.1| hypothetical protein SPO0221 [Ruegeria pomeroyi DSS-3]
MAELLIVYHSRTGGSRQMAEACAAGAQSEIATTLLTAEAAGPEDLLRASGYVFCCPENLAAISGAMKEFL
DRCYYPVLGRIEGRAYAQMICAGSDGQNAARQLARIATGWRLKEVQPPLILCTHAQTPEAIQAPKHIPEA
ELGQCRDLGQALGAGLAMGMF
>gi|56695144|ref|YP_165491.1| alanine dehydrogenase [Ruegeria pomeroyi DSS-3]
MKIGCPKEIKPQEFRVGMTPNAAREAVSHGHEVIIETNAGAGAGFDNADYVDAGARIVDTAAEVFATADM
IVKVKEPQAIERKMLREGQLLFTYLHLAPDPDQTHDLLASGATCIAYETVTDRNGGLPLLAPMSEVAGRL
APQVGAWTLQKANGGRGVLMGGVPGVGPAKVLVIGGGVVGTHAAKIAAGMGADVTVLDRSIPRLRYLDDV
FGGTFKNSYASAGNTIELARQADMIIGAVLIPGAAAPKLISRAQLSELKPGAALVDVAIDQGGCFETSKA
TTHQDPIYEVDGIMHYCVANMPGAVARTSTIALGNATMPFMLALADKGWKQACADDVHLLNGLNVHAGKL
TYAAVGEALGLDVVSASQLVQ
>gi|56695145|ref|YP_165492.1| AsnC family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MSLDATDRKILTALQAKGRMSNAELSDKANLSPSACHRRVQRLEAEGYIRNYVALLDARKMGLPTTVFVE
ITLQGQADEVLDAFEKAVARIPDVLECHLMAGTADYILKVVAENTEDFARIHRQHLSRLPGVAQMQSSFA
LRTVFKTTALPV
>gi|56695146|ref|YP_165493.1| polyphosphate kinase, putative [Ruegeria pomeroyi DSS-3]
MTHESDDPSLDWLEAELEDSLDEDFEIEFSEPMLSMEIRRIYKDQRPDLLDRQVYFRNLLRLQAELIKLQ
DWVQHTNSKVLIIMEGRDAAGKGGVIKRITQRLNPRIARVVALPAPSRREQSQWYFQRYVPYLPSGGEMV
LFDRSWYNRAGVERVMGFATEDQVEQFFQDVPEFERMLVRSGIILLKYWFSITDEEQQLRFLMRVHDPMK
QWKLSPMDLESRIRWEQYTKAKEQMFSRTNIPEAPWYIVEGNDKKRERLNCIEHLLSKIPYEDIPHEKVT
LPDRRYNPDYERQVLPDELYVPKVY
>gi|56695147|ref|YP_165494.1| transcriptional regulator, putative [Ruegeria pomeroyi DSS-3]
MTDDLSDDLFLVHPDGTPNGPAAATLSFTRSPTVLLTFAGNRFTRAAARHYQTEFGIGAMDWRMLVMLTR
EPGSSVSHAARTIGIDKAAVSRSLHRLDALGLARAEDGNERRRHWTLTKAGRQMHARILDSALDRQRRLL
DGFTPEEVDAFTTYLRRILINIETLGATDP
>gi|56695148|ref|YP_165495.1| cytochrome P450 family protein [Ruegeria pomeroyi DSS-3]
MTTRTPQNTHCVDMTTGSRAMSDAPVYEIDLAAFWADPYPDLKRMRAEAPIAYVPQLGATLITRRDEIFA
QEKRIEIFSSDQPQGLMTVLMGQNMMRKDGDAHMAERKAIFPTVSPKTVKQVWVAQFRAAAQRVLDDLAP
RGACDLVRDYAMPVSAEALKAITGLTNMTAAEMDRVSQGMIDGCANYAGDPLVEARCHDCTASIDAHIDA
MIPVLDARPDHSLLSVQRRAGLSDAQTRANIKLAISGGQNEPRDAIAGTAWAVLSHPDALARLQSGAVPW
LRAFEEYARWISPIGMSPRRVAQRATVQGVTLEPEDRVFLMFGSGNRDESVFANPDRFDLDQDIAPAISF
GAGPHFCAGAWASRALIGEVALPLLFERLPGLALDGEARFGGWAFRGPITVPVRWEPAPREG
>gi|56695149|ref|YP_165496.1| PaxA, putative [Ruegeria pomeroyi DSS-3]
MSQASTLEREMLELINNERTSRGLNPVTLELKLNDASEDHSKWMLERDVFSHTGVNGSSPGDRIEKTGFK
FEGNSIWAENIAWQSERGAPGLSDDVKNLHESLMNSPGHRANILNPDVTLVGIGIERGNFEGYDAVMVTQ
NFARTAAEVELDTGAPTPEPEPKPEPEPKPEPEPKPEPEPKPEPEPKPEPEPKPEPEPKPEPEPKPEPEP
KPEPEPKPEPEPKPEPEPKPEPEPKPEPEPKPEPEPKPEPEPKPEPEPKPEPEPKPEPEPENACEGSDGS
DLIFTDDTGGAAHGKGGNDIMIGGRGMDIFWGDGGQDILIGGRGMDKLSGGDGDDVLLGGRGKDMLDGGA
GNDLLIGGRGKDALDGGEGDDHMLGGAGADTFHFSTGKDVVFDFGVRGQADLVDLGKADGIADFDDLKAN
HLSEVDGDAVITDAAGNSLTLLGVQMDMLDAQDFLF
>gi|56695150|ref|YP_165497.1| hypothetical protein SPO0228 [Ruegeria pomeroyi DSS-3]
MRPGHWAGRRTANPPFQPPAERRARPTRLLAENRSLVTAPGRFATPLSPPDKTGDSIRGEMERRQGKDTM
TAADPNLSAGADQPEGATTLTGILFLLLATTIFPIQDVIIKSLSSEFAVHQIVFWRSVFALPIAAAMALY
EGSLWPWKIGSWPLQLTRAVAAFSSYLVYYMALAAIGLAETAAITFSTPIFVTLLAAVFLGEKIGLWRWL
AVFLGMAGVLVIVQPGASVFEPAALLALAAALFYAISIIATRRLGNRTNGGTMTLVTLLVYIVGGTVLGL
VFSGLETASPHPSLAFLYRDWIAPAPMDWLALAALGVTSGIGFFALSQAYRMAEASVVTPFEYTYLPWAV
LWGYLVFGVLPVMSTWIGLTLIVGSGLLILFRETMRGRRIVRRRGLGVMRQR
>gi|56695151|ref|YP_165498.1| 30S ribosomal protein S21 [Ruegeria pomeroyi DSS-3]
MQVSVRDNNVDQALRALKKKLQREGVFREMKLKQHFEKPSEKKAREKAEAIRRARKLARKKAQREGML
>gi|56695152|ref|YP_165499.1| hypothetical protein SPO0230 [Ruegeria pomeroyi DSS-3]
MSPTYEEARNHLLDAALTHVAFDGWTEETFRAAAAETGLDMDFARAICPRGAVDLALTYHARGDAAMVER
LAAAELSELRFRDRIAAAVRFRLEAVEDKEAVRRGVTLFALPAHAGEGAKAIWQTCDVIWSALGDSSEDV
NWYTKRATLSAVYSATVLYWLGDETPGHEATWEFLDRRIDNVMQFEKFKADVQKNPLLKPLLAGPNWLFA
QMRAPRDKGDLPGSLG
>gi|56695153|ref|YP_165500.1| alcohol dehydrogenase, zinc-containing [Ruegeria pomeroyi DSS-3]
MSQQMRAVEISRPGGPEVLQLTQRPRPEPGHGQVLIKVAYAGVNRPDALQRAGAYDPPPGASDLPGLECS
GEVVAVGPGAEDVAVGDKVCALLPGGGYADYVVTPAAHCLPVPQGMALREAACLPETFFTVWSNVFTRGG
LKAGERFLVHGGSSGIGTTAIQLAHAFGARVFATAGSDDKCRACLDLGAERAINYRDEDFVKVMRSEGGA
DLILDMVGGDYIPRNVKALAEDGRLVQIAFLQGPVVELNFALMMVKRLTLTGSTLRPQSDLAKADIARDL
REAVWPLLDAGRIAPVMDSEFDLGDAAAAHARMESSGHIGKIVLKVG
>gi|56695154|ref|YP_165501.1| quinone oxidoreductase, putative [Ruegeria pomeroyi DSS-3]
MSETARTVVIEGFGGPEVLQLRDLPVGEPGPGELRIRHQACGLNFIDVYQRTGLYPLALPHALGMEAAGI
VEAVGEGVTHLKPGDRAAYAATPPGAYAQARVMPAAQVCPLPDEISFDQAAAMMLKGLTVDYLFHRTTPL
SRGDTVLFHAAAGGVGLIACQWAKAEGITLIGTAGSDEKCALAKAHGATHVINYRTENFTDRVRELTDGK
GVDVVMDSIGADTFEGSLDCLKPLGMMISFGNASGPVPPVNIGMLGQKGSLKLTRPTLFTHISDHAACQA
MARRLFGKVTGGEVKIRIDQRFPLDQVADAHRALEARQTTGSTILEL
>gi|56695155|ref|YP_165502.1| AsnC family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MDQLDRQIVAALQHNARESTTKIAARLGVARTTVHERITRMESRGVIAGYSVVLREPQDESKVQVVVLLE
VQQKETTRIVKRLEAYPEIKLCLSINGEYDLLLSAEAPRIEDLDILVDEVGAIPGILRTNTFVVFGRRID
RT
>gi|56695156|ref|YP_165503.1| hypothetical protein SPO0234 [Ruegeria pomeroyi DSS-3]
MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKALGGFDAV
ISAAPFFLTPIIAKAAKAAGAHYFDLTEDVAATNAVRALAEDSQTAFMPQCGLAPGFVGIAGAALAAEFD
EIDSLHMRVGALPLYPTNALKYNLTWSTDGLINEYCNPCDAIVNGERVKTAPLEDYEILGHDGVEYECFN
TSGGLGTLPETLDGKARSVSYRSIRYPGHRDILRLLLNDLGLERRRDLLKDIFETALPRTDQDVVLVYCT
AKGRIGGQLREKSLINKSYSRVIDGQVWSAIQVTTAAGVLGVVDLMRAGTLPAKGFVRQEQVKFADFLET
EFGRLYRAGDLTAQNKAA
>gi|56695157|ref|YP_165504.1| aldehyde dehydrogenase family protein [Ruegeria pomeroyi DSS-3]
MKDIVMTAETVMQQLGLGAADLTGGSIRVTSPIDGRVLGEVHETPLSEMAAVLDRAKSAFKIWRSVPAPR
RGELIRLLGEELRASKEALGALVSWEAGKITSEGLGEVQEMIDICDFAVGLSRQLYGLTIASERPGHRMM
ETWHPAGPVGVISAFNFPVAVWSWNAALAIVCGDPVIWKPSEKTPLTALACQKIFERALARFGDAPDGLL
QTLIGGADLGRTLVESEDVPIISATGSTRMGRAVAPIVAARFGKCILELGGNNAMIVGPSADLEMAVRAI
VFSAVGTAGQRCTTLRRLIAHNSIKDELVARLKKAYAGLPIGNPLAEGTLIGPLVDEASGNAMTDALKSA
KAEGGMVFGGARVSEGVPAGGVYMQPAIVEMPAQSATVKTETFAPILYVMGYDSFEEAVHIQNDVPQGLS
SCVFTLNMREAEQFLSASGSDCGIANVNIGPSGAEIGGAFGGEKETGGGRESGSDAWKAYMRRQTNTVNY
SAELPLAQGVKFDI
>gi|56695158|ref|YP_165505.1| glycerophosphoryl diester phosphodiesterase, putative [Ruegeria pomeroyi DSS-3]
MNGFSQLEGLRGHPSVVRVIGHRGARGVMPENTLEGFAFTLAAGVRALEFDVVMTADGVPVVTHNHHLAN
AMTRDGQGHWLTGAERQVAEMTYAEIRALDVGGLDGRTVYGRRFPDQAFLTGIHVPRLGELLDLCAGYGD
QAPYLLLELKSDPALMHDHAARAEMVAAVLADVRRYRMEPRTVMHSFDWALLGECRRQAPDLPTSYLSQL
PENADDPGEDSAKPVGPDYDRMTESLPQAVASAGGQLWCPYFLDVTPELVAEAHDLGLIVLTWTVNEPED
IRRMATTGVDGIVTDYPGRTQRILIDMGLSWT
>gi|56695159|ref|YP_165506.1| glycerol-3-phosphate transporter ATP-binding subunit [Ruegeria pomeroyi DSS-3]
MASITLDNLVKAYGDTEVLHHVAGQIEDGEFIVIVGPSGCGKSTLLRMVAGLETVTAGQISIGDRVVNQL
EPADRDIAMVFQNYALYPHMSVRENMAYGLKIRKISKDEIARRVEEAADILELRPYLDRKPRQLSGGQRQ
RVAMGRAIVRNPQVFLFDEPLSNLDAKLRVQMRLEIRKLQQRLGVTSIYVTHDQVEAMTLGDRLMVLNGG
YVEQFGTPIELYDRPATTFVAGFIGSPAMNFLPATAAEGSVTLANGARIAGSGTAHGTVTLGLRPEHLLP
DEGGPVRVRVELVEQLGANSLLHGQLEGTDTEMVVSMPGHMSAAADAVMAFTPTADSLHLFDPETGKRIA
E
>gi|56695160|ref|YP_165507.1| SN-glycerol-3-phosphate ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MVENRPILNVITHLVLILGIVIVALPIWITFVAATHDAVRMTQAPIPMLPGTHFWENFTQTLFGSGLSGT
ETAPVWRMLLNSLAMAMMIALGKIAISLISAFAIVYFKFPFRMFFFWLIFVTLMLPVEVRILPTFEVVAD
LGMLNSYWGLSIPLIASATATFMFRQVFLTIPDEMLESARIDGAGPLRFFWDILIPLSRTNIAALFVILF
IYGWNQYLWPLLITTDTDMTTIVMSIKQMLEAAEQSPQWNIIMMTALLAMLPPVFVVVAMQKLFVQGLTE
TDK
>gi|56695161|ref|YP_165508.1| SN-glycerol-3-phosphate ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MPRRFRPRGNENPMLKRVHFPSSLLPYLLVAPQILITLVFFIWPASQAVYQSFLIEDAFGLSTEFVWFEN
FELLIEDAQYLQSFGRTILFSAAVAVLSMGSALILAGFADRVVRGATTYRTLMIWPYAVAPVLAGALWVF
MFNPTLGIFPFLLDMVGIDWNHYLNGTQAMTLVIFAAAWKQIAYNFLFYLAAMQSIPRSLIEAAAIDGAG
PVRRFVDHIFPLISPTTFFLLVINAVYAFFDTFGIIHAVTQGGPANSTTILVYKVYNDGFVGLDLGGSAA
QSVILMILVIAMTVVQFRFIERKVEY
>gi|56695162|ref|YP_165509.1| SN-glycerol-3-phophate ABC transporter, periplasmic SN-glycerol-3-phosphate-binding protein [Ruegeria pomeroyi DSS-3]
MIAFIKLLLELFFPLRNHPPVHEPREVDMTCKFLTLSASALVLTTGMAFAQTEIQWWHAMGGTNGERVDK
IAADFNASQSEYKVVPTYKGNYTETMTAAVAAFRAKEHPHLVQVFEVGTATMMAAKGAIYPVEQLMSDAG
EPFDKSDYLPAVISYYQTSEGELLSMPFNSSTPVLWYNADALKAAGVEVPKTWDDMKTAAKALVDSGMDC
GFSFGWQSWVMIENYSAWHNIAMGTKENGFAGFDTELSFNNDEVTARLDDIAAMSEGNLFKYGGRRGDSL
PMFTNGECGMWMNSSAYYGSIKGQAQFEFGQTMLPLDSAVADAPQNSIIGGATLWALAGHEAEEYKGLAK
FMTYLSSPEVQAWWHQETGYVPITTAAYELSKEQGFYDSNPGTDTAIQQLSLNTPTANSRGIRFGNFVQI
RDVINEELEALWAGDKTAAQALAAATERGNALLRKFERSAN
>gi|56695163|ref|YP_165510.1| LysR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MNFKLRQLEAFRAVAQTGSITRAAQQLGISQPAASRLLADFSASVEFPLFVREGGSMSPTPESRYMLAEI
NRVFEGLAHLEELRHNLKDRTAGHLRIACLPGFATSHLPRVLTAFLKDRPGVTVTLEPDRPERILEWIVG
QQYDCAITDGFAGHPATESTDIAIRTVCILPPGHPLSDRPEITPHDLRGEKIIHSRRDSPFFRRLAQAFT
DSEVELSSWIEVRQFTTACTIVAEGQGAAVLSALDAEQYRDRGLVIRPFVPRIAHRLSLLRPVTGSLSPL
VLDFLEAFTASLAPFIDHEERRANPVGAR
>gi|56695164|ref|YP_165511.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ruegeria pomeroyi DSS-3]
MSDRPHTPLLDQVTRPADLKRFSDAQLTQLAGELRAETVSAVSVTGGHLGAGLGVVELTVALHAVFDTPR
DKVIWDVGHQCYPHKILTERRDRIRTLRMKDGLSGFTKRSESPYDPFGAAHSSTSISAALGFAVARDLGG
VTPEGLGDAIAVIGDGSMSAGMAFEAMNNAGHLKKRLIVILNDNEMSIAPPVGALSNYLSRLYAEEPFQE
LKAAAKGAVSLLPEPFREGAKRAKEMLKGMAVGGTLFEELGFSYIGPIDGHDMGQLLPVLRTVKARATGP
ILLHVLTKKGKGYAPAERARDRGHATAKFDVVTGEQKKAPSNAPSYTAVFGKALVDQAARDDKIVAVTAA
MPDGTGLNLFAERYPSRCFDVGIAEQHGVTFSAALAAGGLKPFCAMYSTFLQRGYDQVVHDVAIQRLPVR
FAIDRAGLVGADGATHAGSFDIAYLANLPGMVVMAAADEAELVHMVATAAAHDDGPIAFRYPRGEGVGVE
MPELGKVLEIGKGRMIQKGARVALLSFGTRLTEVQKAAEALAARGITPTIADARFAKPLDRDLILNLAHD
HEALITIEEGAVGGFGSHVAQLLADEGVFDHGLKFRSMVLPDIFIDQSSPADMYAVAGMNAPQIEAKVLD
VLGIGRIGEKRA
>gi|56695165|ref|YP_165512.1| farnesyl diphosphate synthase [Ruegeria pomeroyi DSS-3]
MFHERLAQDAALIQRSFDTVLGALEPLDITRAMAWTTEGGKRLRGFLVLESARLHDVDEARAIWPATAIE
ALHAYSLVHDDLPCMDDDDLRRGRPTAHVKWDEGTAVLAGDALHSLAFELCTRPEVGTAETRATLALTLA
QAAGARGMVLGQALDIAAETAPKPLTLDQITRLQAGKTGALIEWAAAAGAVLAGADPDPLRQYARALGLA
FQIADDILDVEGDAEKAGKRLQKDAGAGKATFVSLLGLDAAKARARDLVDQGCAALDGYGERAGTLKEAA
RFVIARDN
>gi|56695166|ref|YP_165513.1| exodeoxyribonuclease VII, small subunit [Ruegeria pomeroyi DSS-3]
MSFEQAMKELETVVGQLERGDVALDQSIALYERGAALKKRCEDELKRAEEKVAAITLDSNGQPTGTKPVE
GL
>gi|56695167|ref|YP_165514.1| histone deacetylase family protein [Ruegeria pomeroyi DSS-3]
MTTALITHADCLTHVTPTGHPERVARLEHVLHALEPLDLRRVTAPLAAEDDLLRIHPAGYVADIRDARPD
EGFAQIDGDTFLSPGSVDAAFRAAGAVVRAVDMVLGGEAQNAFCAIRPPGHHAERETAMGFCLFGNAALA
AKHALDHHGLRRVAVVDFDVHHGNGTQDLLWDEARALLITSQQMPLWPGSGRPDEDGAHGQIVNIPLAPG
TGGAEMRAAYMAQAFPRLRAFKPELIIISAGFDAHQDDPLANLNWSTADFAWLTAELCALAQELCQGRIV
STLEGGYDLNALAAATRAHVQELIKAAT
>gi|56695168|ref|YP_165515.1| DNA-binding response regulator PetR [Ruegeria pomeroyi DSS-3]
MSAFDAHLLIVDDDERIRDLLKKFLMRHGFLVTAARDAEHARRILSGLDFDLIVMDVMMPGEDGVSLTRA
LRQTLSTPILLLTARGETEHRIAGLEAGADDYLAKPFEPRELLLRINAILRRVPDTSAQDAAPKFLQLGP
IRYDIERGEMWQGDQLVRLTATENQLMKIFAARPGEAITRTKLVEDLGRDRGQAQERAVDVQITRLRRKI
EPNPKQPRYLQTVRGAGYMLAPD
>gi|56695169|ref|YP_165516.1| transcriptional regulator PetP [Ruegeria pomeroyi DSS-3]
MSEARPSPVFGGESLLFLTDEQLRQGIEAMFFAYRGFTADPDRILAEMAYGRAHHRAIHFINRAPGTTVN
NLLAILGVTKQSLNRVLRTLIADGLVESRVGTQDKRERHLFLTEAGAALEAKLSDAQRARMRAAYKEAGP
EAVTGFRQVLEAMMDREMHRAYAKLRDSGS
>gi|56695170|ref|YP_165517.1| branched-chain amino acid aminotransferase [Ruegeria pomeroyi DSS-3]
MASYDDRDGVIWMDGELVDWRDAKVHILTHAMHYASSVFEGERAYNGKIFKSREHSERLVASAQALDMPM
PYTVDQIEAAKEETLKASGLTDAYVRALVWRGSGEDMGVASARNPVRMAIAVWPWGAYYGDAKMQGAKLD
IAEWKRPSPETIPVHAKAAGLYMICTISKHKAEAKGCSDALFMDWRGYVAEATGANVFFVKDGEVHTPLA
DCFLNGITRQTVIGMLKDKGITVHERRIKPEEMEGFEQCWLTGTAAEVTPVGQIGPYTFEVGQMTRDIAA
EYEALVRA
>gi|56695171|ref|YP_165518.1| organic hydroperoxide resistance protein [Ruegeria pomeroyi DSS-3]
MEPQMTVSPVYTAHARATGGRNGQAQVAESGLDLVLATPPAMGGNGKGHNPEQLFAAGYAACYIGAMQFA
TTQDKTLAKVPADISVDAEVGIGPRAEGGFGLTVALKVSMPGVDAAEAQRIADAGHAICPYSNATRGNIV
VTTEIA
>gi|56695172|ref|YP_165519.1| MarR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MLDRALTLDELLCFSLYSANHAMGRLYRPLLARFDLTYPQYLVLVALWQRDGRKVSALGAELQLESNTLT
PLLKRMEAAGLIRRARNPEDERSVIVTLTDKGRGLEGEAAEISNCILAAADADIAELAELRDRLHRLTAR
LREAG
>gi|56695173|ref|YP_165520.1| plastocyanin/azurin family copper binding protein [Ruegeria pomeroyi DSS-3]
MRLTRRQVCFGAGGAIVGSALPASGSTPVVVDIRSFVFEPAEITIRAGETIVWINHDFAPHTATDDEVNW
DTGELEKDAQAAIRFDTPGTYPYFCAYHPHMTGTVIVTA
>gi|56695174|ref|YP_165521.1| hypothetical protein SPO0257 [Ruegeria pomeroyi DSS-3]
MKTLTLAAAIAVGFVAQSASAADKMNDLEIAHTAYTAGQLDIRYAHLALAVSDNAEVRAFAETMIRDHTA
VNAAAGDLITKLNVTPQDNDLSRTLVKGAADKRAELISLSGKAFDCAYAQNELGYHQVVNKTVEGVFIPA
VTVEPLKDLLSDALVTFKVHEGHAEQMVNGLQCG
>gi|56695175|ref|YP_165522.1| AraC family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MLDLLSDILTRLSLKGTLYFRTSFTPPFGVHVPSYQNVARFHFAYRGECMVHVPAANETLRLTQGDLVLI
PHGAEHMLMCQHSRPDSALPLDTVLSRSGYRGEGVLVYGGDEEDQDTQLICGHLTYGMHGRSCPGHTLLE
RLPPYILIRDYGEERGVWLEATLRVIAAEAGRDRMGSDLIALKMTEALFAQAIRAHLETVSPDDGALAGF
ADPNLSRALSAFHREPAKDWTVEGLARIAGQSRTGFAQHFAAKMGMTPMQYLTSWRMQIACEGLVDSRLS
VADAAELAGYASEAAFSRVFRKQLGVSPAAYRQQFESAKRQALAAS
>gi|56695176|ref|YP_165523.1| hypothetical protein SPO0259 [Ruegeria pomeroyi DSS-3]
MPPSGGSTNLIRTPIMSIRFVTRTVHAYLDYPVALALMGLPVILGLGAENPMALWLSVITGFAAFVLTLL
TDHHLGVWRVLPYKFHLAVDLTVGIVFLLAPSLFGFSGLDALFYWVNGAAVVTVISLSTPEQKPAM
>gi|56695177|ref|YP_165524.1| alkaline phosphatase, putative [Ruegeria pomeroyi DSS-3]
MTRLLRPSRRAFLAGGTAFTATLAMPSISRAASRPVFTHGVQSGDVDTMSGMIWTRTDRPAKVMMEVSST
ESFADARRLSPMFATPESDFAVKRLVDNLPADQEVFYRFVAADLDDISAVSEPLMGRFRTAPTARRDIRF
AWSGDTAGQGWGIDDEGMRTYATMAQHQPDFFIHSGDTIYADGPMKDEVEKDGAVIWKNTTLIDEKRKVA
ETLAEFRGQWKYNLMDEHVQAMNALCPTFFQWDDHEVVNNWSDAKDLSADDRYTEKSVHVLQSRAARAFH
EMTPLRITPAEPGRVYRKISYGPMLDVFFLDLRSYRGPNGASMEDEITDQSRILGAEQLAWIKRELAAST
ATWKVIASDMPIGLIVWDNWKEKAGAEAISNGDHGPAKGRELEIADLLRFIKSAGVRNTVWFTADVHYTA
AHHYSPERAQFQDFDPFWEFVSGPLHAGTFGPNDLDRTFGPEVKFVKAPTPEQGVNLPPSMGLQFFGLVD
IDAASQQMKVRLMDRGNTELWSVTLDPVLSAI
>gi|56695178|ref|YP_165525.1| hypothetical protein SPO0261 [Ruegeria pomeroyi DSS-3]
MSRQAENLSGSLYMVAAMGAFALEDMFVKSATAVLPVGQVLILFGLGGMGIFALLARWRGEAAFVRPDRT
LAIRSSFEVMGRICYTLALALTPLTSTSAILQATPLVVAMGAALFLGETVGWRRWVAILIGLAGVLLILR
PGMQGFVPASIFAVLGMIGFAGRDLATRAARPRLSNAQLGVYGFGALVVSGVLALVWTGGATLPDAHTAL
QLGAAILFGVLAYECLTRAMRRGEISVIAPFRYSRLVFAMILGIVVFGETPDAATWIGSAIIVAGGIYNI
LREGRSRR
>gi|56695179|ref|YP_165526.1| cob(I)alamin adenosyltransferase [Ruegeria pomeroyi DSS-3]
MTDAQDHKEKMKAVQAEHRKKVSEAVDPGRGLVLINTGKGKGKSSAAFGVVIRALGWGQKVAVVQFIKGK
WKTGERRFFEEHNLVTWHTMGEGFTWDTQDRDRDIAAATAAFGKARELMESGDYDLVVLDEINIALRYEY
LSVDTVLDGLQARSDRTSVFLTGRDAPQALRDYADLVTEMTVEKHPFEAGIKAQRGVDF
>gi|56695180|ref|YP_165527.1| membrane protein [Ruegeria pomeroyi DSS-3]
MTADSQTCFCVCTMAVTVTNNQAIDLSRAKAQGRAMAKPLTSHRPILAVSLKLGALVLFTSMSALIKVLS
ADFPAGEMVFFRSLFAIPVIILWLLARGELRQGLIVKKPMGHFWRGVLGTGAMGLTFTGLGLLPLPEVTA
IGYATPIFTLILAALMLGETIRLVRIGAVALGLLGVLIMLWPRLGTGASLDQAATIGALCVLAATVARAF
VQIHIRQLVQVDHAAAIVFYFSLTATLLSGLTAFFGWVTPTPEQAAILILTGLVGGVAQILVTSSYRFGQ
ASMLAPYDYASMLFAIIIGYIWFDEWPTLVMLAGAMLVIAGNVVVIWRERQLGLERGKARSVTDPKG
>gi|56695181|ref|YP_165528.1| CaiB/BaiF family protein [Ruegeria pomeroyi DSS-3]
MDQIASAFGPQGFDVQGEGTWPSRFAVTDLATRCFGAVGAALGAVIEARGLGPRPAISVDRRLASLWYSW
SIHPQGWQMPGAWDAIAGDYAAADGWIKLHTNAPHHRAAALSVLGCGAERATVAEAVRGWQADTLEAAIV
GAGGAAAAMRSRAAWLAHPQGAAVAAEPLVHWATRAGVLRDFGGTRARPLAGLRVLDLTRVLAGPVATRT
LAGYGAEVLRIDPPSWSEPGVVPDVTLGKTCAHLDLKQAADRARFEALLAGADVLVHGYRPGALDALCSP
ERRLALAPNLIEVSLCAYGWTGPWAGRRGFDSLVQMSCGIAEAGMGWAGADQPHPLPVQALDHATGYLMA
AAVLTALARAARGEGVSAARLSLARTAELLCGLETGEEGPAITGSTPEDLSDWDEQTSWGPARRLKPALS
VEGAEMRWDSAACELGSSPAAWR
>gi|56695182|ref|YP_165529.1| auxin efflux carrier family protein [Ruegeria pomeroyi DSS-3]
MSQILTITFPIYAALAVGFLVVRQGWFSSADMRVLGRYVMDIALPALLFNAVASRDVAEVFHPGYMLAFA
AAGLATVALSYLWFTLTGTEARRRAVAVMGSSCPNSGFVGYPVMLLTFPDLAGVILALNMLVENVLIIPA
CLILTDMARGRGQGGIGQRIAGILWGVLKRPMVIGLLLGLAVSLAGVPVPQTVTRLMQMLAASASALALV
VIGGSLAGLSWKGSRWHAVQISALKLLLHPALALLAVILVAAIGLPLDPDMGTALILSAAMPMFGIYAVL
AQELGHEGMASIALLTATTLAFFTLSGLLWWLT
>gi|56695183|ref|YP_165530.1| HD domain-containing protein [Ruegeria pomeroyi DSS-3]
MTTCFCTGARSGPTVAISADLHQALRGIVAQRMATDPAHDLAHLDRVWVNVQAIASPGADRDVLLAASYL
HDLVNLPKNAPDRHTASRRSADEAAPILRDLGFDEAQIAATGHAIAAHSFSAGISPESEEARILRDADRL
DALGAIGIARNFSVSGSLGRALYDPADPFCERRTPDDALYSLDHWRVKLLSLPQGMLTDKGRALAEARIA
LMLRFLDDFAAEIGTPLPEGWTRG
>gi|56695184|ref|YP_165531.1| chorismate synthase [Ruegeria pomeroyi DSS-3]
MSMNSFGHLFRVTTWGESHGPALGATVDGCPPGVPIEEAMIQHWLDRRKPGQNKYTTQRREADEVKILSG
VFEGQTTGTPVQLMIENTDQRSKDYGDIKDKFRPGHADITYFQKYGIRDYRGGGRSSARETAARVAAGGL
AREAIRALAPNAQITGYMVQMGPHRIDRARFDWAQIEQNPFWVPDAQAASDWADYLDGLRKSGSSVGAVI
EVVARGVPAGLGAPVYGKLDTDLAAAMMSINAVKGVEIGEGMAAAELTGEANADEIFMGQNGPQYSSNHA
GGILGGISTGQDIVVRFAVKPTSSILTTRKTITKSGEETEIITKGRHDPCVGIRAVPVGEAMMACVILDH
LLLHRGQIGANRGHIG
>gi|161598435|ref|YP_165532.2| riboflavin synthase subunit beta [Ruegeria pomeroyi DSS-3]
MTHTRYAFIKANWHADIVDRALEGFLELIPPEQVDVYDVPGAFEMPLLARDLAQTGRYAAVACAAFVVDG
GIYRHDFVAQAVVDGLMRAGLDTGVPILSVSLTPHQYQETDHHNAIFRAHFVDKGREAARAALQITATRS
KLAQAA
>gi|56695186|ref|YP_165533.1| negative transcriptional regulator [Ruegeria pomeroyi DSS-3]
MHPNPAFRGESVARNLEFARDRGFGVLAVAVDGAPLISHVPFLVSGDGSEVELHLVRSNPIVQALKSPLP
ARIAVSGPDGYISPDWYGVADLVPTWNYVAVHLAGELDLRPESELPGLLDRLSARFEKQLLPKPAWTRAK
MTPGAFDRMLRMIVPCRMRVSDVQGTWKLGQNKPEAARMGAAEGVAASTIGTELETLAVLMRGA
>gi|56695187|ref|YP_165534.1| glutathione S-transferase family protein [Ruegeria pomeroyi DSS-3]
MKLYYSPTSPYVRKVMVLLHESGQLDDVDLDTAGGTPLAPAEALVGKNPLAKVPALERPDGPTLFDSRVI
CAYLDARGGAGFYPDGARRWDVLTLEALADGMLDAALLITYEARLRPEDKRWDSWTDSQWDKIARACSAL
EERWMAHLSGPLDMGQIAVGCALGYLDLRHDARGWREGHPALAAWFAGFESRPSMMATRPPAG
>gi|56695188|ref|YP_165535.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Ruegeria pomeroyi DSS-3]
MSHAEDHEGTRRDFLYYATAGAGVVTTGAAVWPLVNQMNPSADVQALSSIRVDISGVEVGTQISVKFLGK
PVFIRRRTQAEIDEARAVDLSDLIDNDSRNPNLSGGGDGGDENRSLDENGEWLVMMGVCTHLGCVPLGDG
AGDFHGWFCPCHGSHYDTSGRIRKGPAPENLHIPVAEFVDENTIKLG
>gi|56695189|ref|YP_165536.1| ubiquinol--cytochrome c reductase, cytochrome B [Ruegeria pomeroyi DSS-3]
MAGIPHDHYEPKTGAEKWLNSRLPIVGLIYDTIMIPTPKNLNWWWIWGIVLAFCLALQIVTGIVLVMHYT
PHVDMAFASVEHIMRNVNGGYMLRYLHANGASLFFVAVYIHIFRGLFYGSYKAPREITWIVGMLIYLCMM
GTAFMGYVLPWGQMSFWGATVITGLFGAIPFVGEAIQTWLLGGPAVDNATLNRFFSLHYLLPFVIAALVI
VHIWAFHTTGNNNPTGVEVRRGSKAEAEKDTLPFWPYFVIKDLVGLAIVLVIFWAIVGFMPNYLGHPDNY
IEANALVTPAHIVPEWYFLPFYAILRAFTSEVWVVQIASFVTGGIIDAKFFGVLAMFGAILAMALAPWLD
TSSVRSGKYRPMFKWWFYLLIIDFFALMWLGAMPAEEPYASFSLIASAYWFGYFFVILPILGVIEKPLPQ
PATIEEDFNAHYGTASDATPAE
>gi|56695190|ref|YP_165537.1| ubiquinol--cytochrome c reductase, cytochrome c1 [Ruegeria pomeroyi DSS-3]
MFKKLAIGAAFALALAPVASHAAGGGEQHIEDFQFSFEGPFGTYDQNQLQRGLQVYTEVCAACHGLKYVP
LRTLGDEGGIGWTDEQVRAYASETFSVYDPELEDDRPAIPTDHFPANTGAGAPDLSLMAKARAGFHGPYG
TGVNQLVRGMGGPEYIFSILTGYEDPPACAPEEMDGYYNVAFAPGGYPDECKIFDDEGVEIGRKAPGSWI
SMAPPISDEQVEFADGHANDLHHMSADVSAFLMWAAEPKMMARKQAGLVGVIFLTILASMLYLTNKRLWA
PHKGKKH
>gi|56695191|ref|YP_165538.1| hypothetical protein SPO0274 [Ruegeria pomeroyi DSS-3]
MRRAFRPISRRLFRRSKPRSHGSGAGCMASFGTDGGWSACRNFRRCPMKPFALIAALALAASPVLALDLT
TDTQLGSTPDEIRTSLKDLGYDVRKIEDEDGKIEAYVVKDGKMAEVYVDPKTGKISKIEME
>gi|56695192|ref|YP_165539.1| cytochrome b, putative [Ruegeria pomeroyi DSS-3]
MAGTPGGREGAREIRVWDPLVRLTHWGVALGVLVNSALTDPDGALHEQVGYGVLALVVLRLLWCIVGPKP
ARFSAFPPSPAAALGHLRAMLRGERKVHLSHNPLGALMVYNLWLTLLALSATGIMMGTVTFFGVDWVEEL
HEAAFGWLMFSVALHVGGVLFDQWRTGVPLARAMVTGRKRIQAERLDG
>gi|56695193|ref|YP_165540.1| LuxR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MRPGDADERRAAILAWMIVLQALCALFFIGDVLADLRAGNDDTGTHLWLEGSVALVLCIGLGVLMYELRQ
LLMRMERVTTTLRAARGEMAEVIEGFFADWGLTPAERDVALMILKGLDNDSIATVRGRAAGTVRAQSAAI
YAKAGVDGRTQFLSLFMEELLADPD
>gi|56695195|ref|YP_165541.1| MiaB-like tRNA modifying enzyme [Ruegeria pomeroyi DSS-3]
MSAPKFTTLGCRLNAYETEAMKELSAQAGLDNAVIVNTCAVTAEAVRKARQEIRRLRRENPTARLIVTGC
AAQTEPETFTAMAEVDAVIGNTEKMRPETWKSMTADFIGETEAVQVDDIMSVTETAGHLIDGFGTRSRAY
VQVQNGCDHRCTFCIIPYGRGNSRSVPAGVVVDQIKRLVDRGYNEVVLTGVDLTSWGADLPAQPKLGDLV
MRILRLVPDLPRLRISSIDSIEVDENLMQGIATEPRLMPHLHLSLQHGDDLILKRMKRRHLRDDAIRFAE
EARRLRPEMTFGADIIAGFPTETEAHFENSLKLVDDCHLTWLHVFPYSRREGTPAAKIPSQVNGKIIKER
AARLRAAGDRRVALHLAEQVGRSHRILMESPHMGRTEQFTEVHFDTPQPEGQIVTTTITGTSGNALTA
>gi|56695194|ref|YP_165542.1| diaminopimelate epimerase [Ruegeria pomeroyi DSS-3]
MTFMKMHGLGNDFVVVDARLHPVRITGALARGIAHRHLGVGFDQLAVIEPGKGDAHLVFYNADGSTSAAC
GNATRCIARHLMDETGKTELHLTTDRGDLYARDAGDGLTSVNMGAPQLLWHEIPLAEEMDTLELPIEGGP
TATGMGNPHCTFFVADAEAIPLAEFGARYEHHPLYPQRTNLQVAQITGPDRIRMRVWERGVGITLASGSS
SCATAVAAARRGLTGRKVQIDLDGGTIWIDWREDGVWMTGPTMHVFSATLTPEFLASLG
>gi|56698708|ref|YP_165543.1| transposase, truncation [Ruegeria pomeroyi DSS-3]
MRLPQMHRWAAIEIMFSGLKEWRPAATRYDRCPKVFLSASVPAATVLYRPRVLVL
>gi|56695196|ref|YP_165544.1| hypothetical protein SPO0281 [Ruegeria pomeroyi DSS-3]
MNTLKSFIGGVALSLTLAGSAMAAGVDLNASSTGLALQGYDPVAYFTVGEATEGDWKITAVYDDATYRFA
NAENKATFEANPEAYLPAYGGYCAFGAAMGFKFDGDPDNWKIVDDKLYLNLSDEIQAKWEEDVPGFIVKA
NANWTDIADKAPAELQN
>gi|56695197|ref|YP_165545.1| hypothetical protein SPO0282 [Ruegeria pomeroyi DSS-3]
MNLQELALARLRDWPLGTTIGLSGGRRYAVSKSAYASGRSIKLVATELGGTDYISLNLYELAQAPRLAPC
EMPLAKVLAFLSELRPEGKQA
>gi|56695198|ref|YP_165546.1| hypothetical protein SPO0283 [Ruegeria pomeroyi DSS-3]
MPAFDTPAMMLILWAVIGYGLGSIPFGLILTRAMGMGDLRQIGSGNIGTTNVLRTGNKGAAALTLLLDGG
KGAVAVLLARAFAGEDAAQVAALAAFVGHCYPIWLGFKGGKGVATFLGLWLALAWPVGVACCLSWLAGAA
VTRISSMGALVAAASSTFWLVLLDQGAGFVLGIVLTLMVFWRHRANIARLKARTEPKIGQKSA
>gi|56695199|ref|YP_165547.1| dihydroorotase, multifunctional complex type [Ruegeria pomeroyi DSS-3]
MSNILFTNARLIDPEAGTDRIGWLRVTGGRIVATGEDSPQGLEEPPAETLDCGGKCLAPGIVDIGVKVGE
PGERHKESYKSAGQAAAAGGVTTIITRPDTNPAIDTPEALEFVTRRAQADTPVNVLPMAALTKGRQGREM
TEIGFLLDAGAVAFTDCDHVVTNTKVFSRALTYAKSCGALVIAHPQDPGLSEGAAATSGKFAALYGLPAV
SPMAERMGLDRDIALLEMTGAKYHADQITTARALPALERAKKNGLDITAGTSIHHLTLNELDVSGYRTFF
KVKPPLRSEDDRQAVIEAVRTGLIDTISSMHTPQDEESKRLPFEEAASGAVALETLLPAALRLYHAGQLD
LPTLFRAMALNPARRLGLASGRLGAGAPADLVLFDPDVPFVLDRFTLKSKSQNTPFDGQRMQGRVLATYV
AGQAVYRRD
>gi|56695200|ref|YP_165548.1| hypothetical protein SPO0285 [Ruegeria pomeroyi DSS-3]
MADPVIRFVADRQAYLRNHTWMAAIAMGGAMAVLWALGNPYIWTGAPAGLAAIALRGWYLASEELAVVWE
ISEDTLSGPGPRVPLSQIEIVRTMGSYVQVITKGGDKHLIKYQADPAATKAAIERAMT
>gi|56695201|ref|YP_165549.1| hypothetical protein SPO0286 [Ruegeria pomeroyi DSS-3]
MTRLDVSATEHGVIRLYSLDMRPEEARFLQEPGAVAQFLGVETLDMDHVEVFPVADLEELGLDGYLAEGL
GVPEDQFDRAALRARTGWVLMLRSRAFGGRALDLPLPAVMTLIGTYREAGTDWSGTLIKTASALPHSAPR
LSPREARRKARNIGFTMFAIIMSLIIAGLAWLIL
>gi|56695202|ref|YP_165550.1| aspartate carbamoyltransferase catalytic subunit [Ruegeria pomeroyi DSS-3]
MSFAHRHLLGIEQLSPADITAILDLAETYVALNRQSAKHSDVLSGLTQINMFFENSTRTQASFELAGKRL
GADVMNMSMQASSIKKGETLIDTAMTLNAMHPDLLVVRHPHSGAVDLLAQKVNCAVLNAGDGRHEHPTQA
LLDALTIRRAKGRLHRLNIAICGDIAHSRVARSNLILLGKMENRIRLIGPPTLVPAQFAEFGAEVYDDMR
EGLKDVDVVMMLRLQRERMDGGFIPSEREYYHRYGLDREKLGLAKPDAIVMHPGPMNRGVEIDGTLADDI
NRSVIQEQVEMGVAVRMAAMELLARNLREAT
>gi|56695203|ref|YP_165551.1| uracil-DNA glycosylase [Ruegeria pomeroyi DSS-3]
MESALDPHTALALLQWQVELGVTETILDAPLDRYALPETAPRPPAQAAADPRRPAMPAPPPKAPEVDPAQ
EAVRAARAVGSLDALRTALAEFEHCELKRGARNLVFADGVPGARVMIIGEAPGRDEDREGRPFVGRAGQL
LDRMLAAIGLSRSESVYITNVLPWRPPQNRDPLPVEIGMMKPFLERHVALAKPEVLVLMGNISCETVLGR
RGITRLRGQWTQAMGLPVLPMFHPAYLLRQPQMKRQAWADLLELQAKLRES
>gi|56695204|ref|YP_165552.1| Ser/Thr protein phosphatase family protein [Ruegeria pomeroyi DSS-3]
MRILAFSDLHMARARAADLVAASLEADLVIGAGDYCNGRQGLDQAMAMLAGIMVPLVLVPGNAESADELR
AAAPDGAHVLHGSGVRIDGLRLFGLGYGVPPTPFGDWSCDLTEGAAAELLDRCTGADILITHSPPKGIGD
VTSTGLSVGSTEIRDAIERVQPRLALCGHIHDSWGAEGMIGRSRVVNLGPTVNWFEVPA
>gi|56695205|ref|YP_165553.1| transmembrane amino acid efflux protein [Ruegeria pomeroyi DSS-3]
MIDPVTLLTFVPAALALNLTPGADMMFCLGQGLRAGPRAGWAASAGISAGGMVHVSIAGLGLGAAVQAMP
WLFDVIRWVGVAYLLWLAWGALRQEFGTSEAPIRPARRAFRDGMLVNLTNPKVILFVLAFIPQFIDPAAG
PILAQFLVFGVVIAIGGFIVNGMVGQFAGGLGRRLTGDPRLGRVLSRLTAGIFAALALRLALLERT
>gi|56695206|ref|YP_165554.1| molybdenum cofactor biosynthesis protein B [Ruegeria pomeroyi DSS-3]
MSRIDESLDFIPVRIAVLTVSDTRSIEEDRSGQTLVDRIARAGHLLADRRIVRDERAQIADQLRAWVADP
EIDVIISTGGTGLTGRDVTVEAHRDVYEKEIEAFATVFTLISMEKIGTSAVQSRATGGVAGGTYLFALPG
SPGACKDAWDGILEKQLDYRHRPCNFVEIMPRLDEHLRRK
>gi|56695207|ref|YP_165555.1| RND family efflux transporter MFP subunit [Ruegeria pomeroyi DSS-3]
MRFLRQSLLGVFLASVALALLIWAGQLVIEAVQARMAGDRKPPAARERVFAVNVQRAEYGTVTPVLEAFG
QIQSRRTLELRAAMGGRVIDLSDNFVEGGTVAMGEVLVRIDPAKPQTELDRARSDLMDAEAEERDAARAL
ILAGDELQAAADQSALRAQAMKRQQNLVERGVGSAAAAETAELADAQARQAVLARRIAVAQAEARVDQAA
TRLARAQLALEQAERDLTETEVTARFDGTLSGVTLVEGRLVAVNEKLAELVDARALEVVFRVSTAQHTRL
LDAAGRLIGAPVEIELDVAGADLTATGTISRDSAAAGEGQSGRVIYARLDAAPGFKPGDFVTVRVEEPPL
ADVVRLPASALDAAGTVLVLDSEDRLEQLPVTLIRRQGDAVLIRGEGLAGREVVLGRTPLLGPGIRVRPL
RDEAQAGSPDLSMLELSDERRARLVALVEANERMPSEVKAKVLGQLAETRVPARLVARLEDRAGG
>gi|56695208|ref|YP_165556.1| AcrB/AcrD/AcrF family transporter [Ruegeria pomeroyi DSS-3]
MVRGIPSAAGGLLSYFTRHRTVANLLLMVLLVLGAAAIPNMRAQFFPDVIVQSVSVNVEWEGAGPEDVDS
AIVQVLEPALLAVDGVESTTASSREGRADIELEFEPGWDMSQAADDVQAAVDAVTTLPEDAEDPSVRRGA
WRDRVTDVVITGPVGPQQLALFTDELVVRLFEIGVTRTTIRGIAAPRTVVEVSSAKLIANDISMNEIATA
IAAEVTGDPAGDVSGANARIRTGVEKRSPEDIAGIVLRSNPDGSKLRIADVAQIRVEGVTRDRAYWVGDQ
PAMSIRVDRSDRGDAIRVQHQVAEVVERMQASLPQGVTVQLIRTRAEAISDRLNILVDNGLMGLALVVML
LFLFLNARTAFWVAAGIPASMFAAIALMYVGGLTINMVSLFGLIITLGIVVDDAIVVGEHADFRARRLGE
HPVVAAETAARRMAMPVFAATLTTIIAFFGLTAIGGRFGELIRDIPFTVIAVLAASLVECFLILPNHMSH
AIAHSAKEHWYDWPNRVVNRGFRWLRDHLFRPFVGWVVHARYVVLAATVAVLASQAALFITGDVQWRFFN
APERGSVTGNFIMAEGATRADTLEMMRELQRATEELGRIYEERHGRNPIDYVLAEIGGNAGRGLAGAETK
DADLLGGISIELIDADLRPYSSFAFVGELQDFVTRHPKVETLSFRGWRSGPGGDALDVQFYGASAQVLKA
ASNDLQAALLRYPEVSAVEDDLAYDKEEVVLDLTAQGQALGFTVDALGRALRARLNGIEAATYPDGPRSA
EIRVELPEGELTADFLERTLMRAPAGIYVPLADIVSVSQRTGFSTVRRENGIRRISVTGDISEDEPARAT
EISAALETQILPRIASERQVEWRMAGLSEQEDTFLSEAATGLTLCLTGIYLVLAWVFASWTRPLVVMAII
PFGLVGTIWGHYIWEVPLSMFTVVGLLGMTGIIINDSIVLVTTIDEYAESRGLLPSIIEGTADRLRPVLL
TSLTTVLGLAPLLYESSQQAQFLKPTVITLVYGLGFGVLLVLLVVPALLAVQNDVARPMSALRRALRGGA
PLARAAVTASAVLTLAWLGVTVAWVAATGALPARLLGLLPPLEGLSPMPAALALFILGALLVCLLAMAVS
AMIMMRAGGRNAA
>gi|56695209|ref|YP_165557.1| NUDIX family hydrolase [Ruegeria pomeroyi DSS-3]
MTAQPRIGALAVVIHEGQVLLAQRGKDPGRGLWGFPGGHVEWGETVRDAALRELHEETAIEARAQRYLTH
FDLIHRDDAGQAVVHYLLVGVLCRYQAGAPQAGDDAMDARWFPIDHVREGTVPLIDRVSELMEIALSAS
>gi|56695210|ref|YP_165558.1| hypothetical protein SPO0295 [Ruegeria pomeroyi DSS-3]
MGMSTRFPMLALAALLSLPLAAPAPAAGLDDLVQIEILDGGLTPSGTYLGAIRMTLSEGWKTYWRAPGEA
GIPPSFDWRGSRNLGELSITWPAPEVFEQSGLRSIGYTDQMVLPIEITPKDANRPVRLRGEMEFGVCKDI
CVPGNLDFDHTLDASAPRNPAIVAALARRPYSAAEAGVTSATCRISPSQGGMRIEARIAMPSAGGSELAV
FEPGDPALWAGEAQTRRQGNTLIASSEILNDGGTAFALDRSRIRITVLGAKRAVDIRGCLPG
>gi|56695211|ref|YP_165559.1| hypothetical protein SPO0296 [Ruegeria pomeroyi DSS-3]
MWGKGEPLPMMDLTGKLLIAMPGMGDPRFERSVIFLCSHGEDGAMGLIVNKPADLNVSTLLEQLEIPSSS
AAAARAPVRLGGPVEMARGFVLHSPDYAGKLQSLKVSDGFVMTATLDILEDIARDNGPARAALMLGYSGW
GPGQLEAEIGDNGWLTADADPDIVFGSRDDGKWEAALKLLGIDALLLSASAGHA
>gi|56695212|ref|YP_165560.1| Sua5/YciO/YrdC family protein [Ruegeria pomeroyi DSS-3]
MPVQPTLRLAADPDGIARAAELLRDGRLVAFPTETVYGLGGDATNGQAVAGIYAAKGRPSFNPLIAHVAS
AEAARRHVHWSETAERLATAFWPGPLTLVLPLRANHGISELVTAGLDTLAVRVPAHPTARTLLATLDRPV
AAPSANPSGRISPTTADHVLAGLDGRIAAVLDAGPCGVGVESTIVGLSGTPILLRPGGLPTEEIEALLGQ
PLARHQQGDNISAPGQLLSHYAPQSTVRLNARAPSDGEVFLGFGPMDCDENLSPSGNLTEAAANLFAALH
RLDTTGKPIAIAPIPERGLGLAINDRLRRAAAPRDP
>gi|56695213|ref|YP_165561.1| acyl-CoA dehydrogenase family protein [Ruegeria pomeroyi DSS-3]
MPYRSPVTDYTFLLSHVVGYDRVSGTEKYAEAGADMVSAILTEAGRMCDEVMAPLQRGGDLNPARLENGA
LRSSPGFAEGWKAIAEGGWIGMSGSPEHGGMGLPMAVTTAVNDMMSGACLSLQLAPLMSQGQIEALEHHA
SDAIKALYLPKLISGEWSGTMNLTEPQAGSDVGALSSKAEPNGDGTYAVTGQKIFISWGDNDFCDNVCHL
VLARLPDGVPGTKGISLFLVPRNLPDENGNAGVANSLKVVSLEHKMGLHGSPTCVMQYDGATGWLVGEEH
GGMAAMFTMMNNARLGVGGQGVGVAEAAWQHAMAYAMERKQGKSASGTIADHADVRRMLTSMKADVFAAR
AILAACAVAIDMGNATGSAEWKARAAFLTPIAKAFGTDTGIAVSETGVQVHGGMGFIEETGAAQFYRDVR
VTAIYEGTNGIQAMDLVARKMMDGGEAAAKLLDEIEDHAERARGRLPELAGPVWEATETLREATEWMVAQ
GELNDRFAGAVPFLRAFARVLGGHFHLIAALADPGGPREKLARYYINALLPEHAGLLEQAQGGCADLYAI
SLEELSA
>gi|56695214|ref|YP_165562.1| metallo-beta-lactamase family protein [Ruegeria pomeroyi DSS-3]
MMDRTPGLAMRYPWDEPPAHGSAIEVAEGVLWMRLPLPMKLDHVNVYALDDGDGWTVIDTGFSSKKTRAI
WQALIDGPLAGKPVRRVVVTHHHPDHMGNAGWFQSELGAELVTTRTAWLFSRMLTLDVQESWPEETLDYY
RSAGMAPEVLAKRMAERPFNFADMVYPMPLGFARIKQGDVFRMGGRDWDVHMGNGHAPEHATFWSRDDNL
VITGDQILSSISPNIGVYATEPMADPLADWLETCERLAPLARPEHLALGGHKLPFTGLPIRMRQLIDNHH
GALKRLRDHLDTPKAASDCFAPLFKRTIGEGEYGLALVEAVAHVNHLYHTGEVTRTRRADGAWLYQRKG
>gi|56695215|ref|YP_165563.1| hypothetical protein SPO0300 [Ruegeria pomeroyi DSS-3]
MQNKIETSAEYAEAAALPPRCHEVHADPDSPARMTDVPVPMQQPVQNKSPAQWAYERLILYIRNFEEQLD
ASQEVAMGFVGGDAGVLRIEGIGFFDPDIVTFYGADGTGARTQLVQHVSQLNVMLRAMPVATEDRPAQRI
GFRLAADLEAD
>gi|56695216|ref|YP_165564.1| glycerophosphoryl diester phosphodiesterase family protein [Ruegeria pomeroyi DSS-3]
MSHFTHVRNAWSGSWSRRRVFVPLYAALRLLVLALIAPALAGLINLAVSLSDQSALTDQDIARFVLSPLG
FAATLAVLSVLLVAEVLSFAVMAATLRSGASNVWHAGSAGLALVLRRLRPLLIFAALFVLRVLALAAPFV
ALAGLIAWWVLVDYDINYYLTFRPPSFRLAMAGIAVLVLVLAWLLMLRLSGWALSLHLVIFEGTRPAQAF
AESTRRMGTRRGALKIELVLWLLTRLALAAALGALASAALALVPIPQEGALRRALVLVVLVMGLWSLAGL
ALAATALGALTKLLDRFYDGAAAAAPLSPSRPQGLRGRLIGAALLAALALGAGMWVSDGLLTQLTAKDEV
SVIGHRGAAGARPENTMAAIVKAIEDGADWVEIDVQETADGEVVVMHDSDFMKLAGVPTKIWDATMQDLA
EIDIGSWFSPDYAAERAPTLRAVLEAARGKSNVLIELKYYGHDVDLENRVIALVEEFGMQDQIATMSLKY
PAVQKMRALRPDWRTGVLAATAVGDLAGLEGDFVAVSSASLRPSLLRAAHAAGKDVYVWTVNEPLLMSKM
ISMGVDGLITDEPAMAREVLAVRATLNPAERLLLWLTQELGWELNAKAYRDDSP
>gi|56695217|ref|YP_165565.1| hypothetical protein SPO0302 [Ruegeria pomeroyi DSS-3]
MQRPIAMTARNLLILCLCAGSPAMAQDLTQMLEMPAHRALMAAQQAAPLTPFTTDGCSGGLSAGWTMVGD
TFPDFAAAQGNLPPWEACCVIHDRAYHDAGGALTPEDSYAARQQADRALQSCVRDTGESHLADLAVRYDT
TPEKVRSAYGTIADAMYLAVRFGGGPCSGLPWRWGYGYAHCTPFDSTAPARD
>gi|56695218|ref|YP_165566.1| cytochrome c oxidase subunit IV [Ruegeria pomeroyi DSS-3]
MADFKPGSMDITTQTNTFDGFIKAMIRVCVVIFFVLLFMAVFTA
>gi|56695219|ref|YP_165567.1| putative lipoprotein [Ruegeria pomeroyi DSS-3]
MKLIFLAGALALSLMACTRQSAPPADDATVAAVRYRDPGPAKLTLYTMVNNRSGAGAHTSLMINASERVI
FDPAGSFWADIVPEQNDVLYGITPAVETAYRGSHARETHHVVVQELEVTPEQAEAAYRLARSMGPVPGAY
CANYTARLLQQVPGFGDIKVTFQPTKLADQFGSRPGAVTNRYYEQDDADLQKGLAANNAKLNQPG
>gi|56695220|ref|YP_165568.1| AzlC family protein [Ruegeria pomeroyi DSS-3]
MSFTTSKSVYWKGFRDGAPFIMVAAPFGTLFGVFATEAGLNLVQVMTFTATVFAGAAQFTALQLLLDDTP
TLIVLLSALAVNLRVAMYSAALTPYLGAAPLWQRAVAAYFTVDQSYALSVVRFETEPDLTVPQRMAYFFG
TVTPLAPAWYLATYLGAVLGTRIPDSWALDFALPITFLAMIGPMLRTLPHVIAALVAIVTALLTAAVPFN
LGLLIAGTAGMMAGARAEVILERRSKRT
>gi|56695221|ref|YP_165569.1| formate dehydrogenase accessory protein FdhD [Ruegeria pomeroyi DSS-3]
MAISDDLSDYIIAPDPGAARLTRAVEGLDQTGAPTRLSVVEERPLTIFLNSQEIVTAMTIGDYPEYLALG
FLRNQGMLRPDEEITGVDFDEDLETVVVRTAVETSHEEKLKKKTRTSGCAVGTVFGDMMEGLEEVRLPQV
EVRTSWLYDLAARINRTPSLYLEAGAIHGTVLCHRNRPLVYMEDVGRHNAVDKIAGWMLSTGEGADDKIL
YTTGRLTSEMVIKTAMMGIPVLASRSGFTAWGVEIARQVGLTLIGRMRGQRFVCLSGAERLVWDADPDSV
PVEDRKHRRKSAQ
>gi|56695222|ref|YP_165570.1| molybdopterin-guanine dinucleotide biosynthesis protein A [Ruegeria pomeroyi DSS-3]
MTKPLGVILAGGLATRMGGGDKGLLPLGGQPLLGHVIDRLAPQVSGLALNANGDPARFNGFGLPVLPDTV
EGFAGPLAGVLAGLDWAAGQRADSIVTAAADTPFFPRDLVARLVAASEGQAHPLVLATTPRDGAVLKSGG
RVNRHPTFGLWPVALRDDLRAALNDGLRKVVLWTDRHGGREALFQAEPFDPFFNVNTPEDLARAETLLER
A
>gi|56695223|ref|YP_165571.1| molybdopterin-guanine dinucleotide biosynthesis protein B [Ruegeria pomeroyi DSS-3]
MRIYGVTGWKNAGKTGLMERLVAEITGRGLTVSTVKHAHHSFDVDHPGRDSWRHRQAGASEVILASRYRV
AQMTELRGAAEPPLSELLGRLSPVDLVLIEGYKREGHPKVEAFRAEAGTALIAPGDPTIRAVASDTPLTL
DRPVFDLNDTTAIADFILSEVGL
>gi|56695224|ref|YP_165572.1| hypothetical protein SPO0309 [Ruegeria pomeroyi DSS-3]
MRPFDTIAMVDWSGGNDTGPRPRKDAIWACVAGAEPVYLRNRGLAENWLCDLIETALAAGRRLMLGFDFP
FGYPTGFARAVSGSDDPLHIWDWFEARIEDTPKANNRFDLAGAVNRGLGGKGPFWANGLKRDIGGLPRTK
RDYHNPFADRRLVERRAPGAFTCWQMAGAGAVGGQVMMGLPVLARLRRRFAGQIGVWPFERLDKPVALVE
IWPSLTLGKAPEGRIKDAWQVERVASDLSGMSLARLGSLLNVTAPEEGWILGVDQG
>gi|56695225|ref|YP_165573.1| molybdopterin biosynthesis protein MoeA [Ruegeria pomeroyi DSS-3]
MTGIEPPPLRNDCFALPAGVEWTPVDTALDMLRDRLGPVTGVEMRLLSQALGGVLAADAVALRSSPPQAN
SAVDGYGFAGAVPEGAHVMPLEEGRAAAGVPFDGVLPAGRALRVLTGAALPEGVETVILEEDVTLGTGEI
AFRGPLKRGANTRKAGEDVAEGAVVLPAGRRLTPADLALLASVGLGVVPLRRQLRVAVLSTGDELVEPGE
TAGPGQIFDANRPMLLSLIHRLGHAPVDLGRVPDDRTTLRATFDRAAAEADVILTSGGASAGDEDHVSAL
LRAAGAMQQWRIALKPGRPLALGLWQGKPVFGLPGNPVAALVCSLVFARPAMAVLAGESWSVPQGYDLPA
GFEKRKKPGRREYLRARVRDGRVEVFASEGSGRVSGLSWAEGLVEIGDDACHIRPGDPVRFIPYGSFGL
>gi|56695226|ref|YP_165574.1| hypothetical protein SPO0311 [Ruegeria pomeroyi DSS-3]
MSGPSPDPDPARNTPLGLYDRPRRASVTGIEIIAIALTLLWLAVSVYLFAFADAGAGGGIGFLVTMLAIF
MPVAMIWVAATAAKASRVMREESQRLQAAIDAIRQAYISQQQKQAAGHEPSVAKKLDEIAAAAKKTETTL
ATFSTSRRARALPMPAAAPESAEDQGLLALGTPAEALSPPLSTEDLIRALHFPETAEDVEGFAALRRALK
DRSAAQLIQAAQDVLTLLSHEGIYMDDLRPDMARPEVWRQFAHGARGRTVASLGGVRDRSSLALTAGRMK
QDPIFRDAAHHFLRLFDRMFTTFEAQASDAEISALGETRTARAFMLLGRVAGTFD
>gi|56695227|ref|YP_165575.1| transcription elongation factor GreA [Ruegeria pomeroyi DSS-3]
MEKIPMTPSGFAALEAELKQLKSVERPAIIKAIAEAREHGDLSENAEYHSAREKQSFIEGRIKELEGVLS
LADVIDPTKLSGAIKFGARVTLVDEDTDEEKTWQIVGEHEANIEKGLLNIKSPIARALIGKDEGDSVEVK
TPGGQKSYEILSIEYS
>gi|56695228|ref|YP_165576.1| glyoxalase family protein [Ruegeria pomeroyi DSS-3]
MKATLEHANLTVADPKATAAWLNTVFGWETRWEGAAIAGGYTVHVGDAGTYLALYAPPKPVPSAETSYDV
IGGLNHVGVVVDDIDATEERVRAAGFTPHNHADYEPGRRFYFDDDNGIEFEVVSYP
>gi|56695229|ref|YP_165577.1| redox-sensitive transcriptional activator SoxR [Ruegeria pomeroyi DSS-3]
MPASEGLSIGALARRTGLAVSAIRYYETQGLIAPWRNAGGQRRYQRADLRRLSFVMIAQQLGLTLPEIRE
VLAGLPGNRTPTRGDWTRISTALRERLNQRIATLERLRDNLDGCIGCGCLSLPNCALYNPADRVGSKGPG
PRLVLDETGDL
>gi|56695230|ref|YP_165578.1| hypothetical protein SPO0315 [Ruegeria pomeroyi DSS-3]
MPVSLQVAYPTRDDTTFDYDYYLTTHMGLVAEHMGPHIQNTVVTKGLAGGPDTPPPFHAIATIVFADQNA
MNAAMKASGPVVSDIPNFYNSAPQMLIGEVVG
>gi|56695231|ref|YP_165579.1| electrotransfer ubiquinone oxidoreductase family protein [Ruegeria pomeroyi DSS-3]
MAEIEREAMEYDVVIVGAGPAGLSAAIRLKQLDADLNVVVLEKGSEVGAHILSGAVLDPCGLDALIPDWK
EKGAPLNVPVKDDNFYMLGEAGQIRIPNFPMPPLMNNHGNYIVSMANVCRWMAEQAEELGVEIFPGMSCS
ELVYGDNGEVKGVVAGVFGLEADGSYGPNTEPGMELHGKYVFLSEGVRGSLAKEVIAKYDLQKGKEPQKF
GVGMKEIWEIDPAKHREGSVTHTMGWPLGGNAGGGSFIYHLDNNQVYVGFVVHLNYKNPHLFPYMEFQRF
KHHPMVAELLKGGKRVAYGARAITEGGYQSMPKMVAPGVALLGCSVGMVNVPRIKGNHNAMLSGKAAAEA
AHAAIKAGRQSDELSDYETEVRSGPIGKDLKKVRNVKPMWSKWGLAASLALGGLDMWTNTLGFSLFGTLG
HGKTDAAATEDASKHKPIDYPKPDGVLSFDRLTNVSFAATNHEESQPCHLRLTDPDLPVKVNLPKYDEPA
QRYCPAGVYEVVEDEGGPRFVVNFQNCVHCKTCDIKDPSQNITWVTPQGGDGPNYPNM
>gi|56695232|ref|YP_165580.1| TPR domain-containing protein [Ruegeria pomeroyi DSS-3]
MFSFVQMTGCLLPLTALTPLSHCTRPRNALALLQSSWKGGSLAISLVRNAVAAVLAAALSVPVSADVGAG
SYLAARQAVFANDFSSAADYFARALAIDPQNPALMENMVLSQLALGRLEQAYPVAQLMQEAGLQSQVANI
AIVVHLLSEERYQEVLDRDPEMRGVGKLVDGLVAGWAEMGLGSVARALAQFDKVADEAGLRGFANYHKAM
ALASVGDFEGAEALFAADDGALTTISRRAALARAEILSQLDRNDQALEMLADVFSGGFDPALSDIADRLV
AGETLPFSLVRSVRDGLAEVFFTIGAALNGEASDDFTLVYIRSAVHLRPDHIDALLMTAGLLESLGQYDL
AVATYKQIPNDSPDYHAAELGRAEALRRSAKPDAAIEVLEKLAKDYPSQPQAFVALGDLQRQQEAYDRAA
TAYDKALQLTDPGAPNMWFLHYARGICHERLGNWPGAEADFRAALELNPDQPQVLNYLGYSLVEKQEKLD
EALDLIERAVAARPDSGYIVDSLGWVLFRLGRYDEAVGHMERAVELMPVDPVVNDHLGDVLWAVGRVREA
EFQWRRALSFIKADDTDGEADPERIRRKLEIGLDRVLAEEGVPPLKVANGD
>gi|56695233|ref|YP_165581.1| 4-diphosphocytidyl-2C-methyl-D-erythritol kinase [Ruegeria pomeroyi DSS-3]
MAIEAFAPAKINLTLHVTGQRDDGYHLLDSLVVFADIGDTIRVSASDRVSLDIDGPEAGGLAAEPDNLVL
RAARLLAPERGAAISLTKRLPVASGIGGGSADAAATLRALAQLWGLAAPSAEQALTLGADVPVCLFPVPA
RMQGIGDRLGPIPPLPAMDIVLVNPRVAVSTPAVFKSLIVKENAPMNPELPRWRDLPEFTCWLADQRNDL
AEPAIAQQPVIADVLNALRDAGALFAGMSGSGATCFGLFPSDGHSAKSVAKAVLRLAHPGWWCAHGRVL
>gi|56695234|ref|YP_165582.1| decaprenyl diphosphate synthase [Ruegeria pomeroyi DSS-3]
MDAKVSTKPHEMLAATLSQEMAAVNALIRTRMASEHAPRIPEVTAHLVEAGGKRLRPMLTLAAARLCGYQ
GEDHVKLAATVEFIHTATLLHDDVVDESGQRRGRPTANLLWDNKSSVLVGDYLFARSFQLMVETGSLRVL
DILANAAATIAEGEVLQMTAASDLRTDESVYLQVVRGKTAALFSAATEVGGVIAGVPEAQVRALFEYGDA
LGIAFQIADDLLDYQGDAKATGKNVGDDFRERKLTLPVIKAVAQATDEERAFWVRTIEKGKQAEGDLEQA
LALMEKYGTLAATRADAHAWAEKARTALELLPNHEIRTMLSDLADYVVARLS
>gi|56695235|ref|YP_165583.1| hypothetical protein SPO0320 [Ruegeria pomeroyi DSS-3]
MKELLRSTDPTVMAFASALLEGEDIDCFQMDVNMSILEGGIGIFPRRMMVRDEDYDRALRVVTDNDIPLG
R
>gi|56695236|ref|YP_165584.1| hypothetical protein SPO0321 [Ruegeria pomeroyi DSS-3]
MTAFAESELSCDAFLGGHLRLFQPRDGYRAGVDPVFLAASVAAQTGQSVLELGCGAGAAILSLGARVPDL
ALTGVELQPGYADLARRNAAANDIALDVVEGDIAALPQALRQQSFDHVIANPPYYLAGSHSPASDAGRAT
ALGERTPLALWIDAAARRLTHRGYLHMIAKADRLPDMLAACDDRLGSLEVLPLMPRQGRAAELVILRARK
GGRAPFRLQSGLFLHQGSRHPGDRDHYLPEIAKVLRQPAPLPWPGAG
>gi|56695237|ref|YP_165585.1| hypothetical protein SPO0322 [Ruegeria pomeroyi DSS-3]
MSVSAHLTELKKKHANLSLEVEQAQRSPGTDDLQISQLKKQKLKLKEEIERLSV
>gi|56695238|ref|YP_165586.1| hypothetical protein SPO0323 [Ruegeria pomeroyi DSS-3]
MTRSRATAIGFVAVLLWALLALLTVGSAPVPPLLLNALCFTVGGLLGLVWVLATGGLAQLRGVRWPVYAF
GTLGLFGYHALYFSALRLAPAAEAGLIAYLWPLLIVLFSGLLPGERLRSGHLLGAALAFAGAGLIITGGG
GPGFQAQYLPGYGLALLCALTWSGYSVLSRRMGDAPTSSVAVFCLATAVASWGLHFMVEETVWPQDMLGW
GATLALGLGPVGLAFYVWDIGVKRGDIQLLGTSSYAAPLLSTLVLVISGIAAPSWVLALSALLITGGALL
AARASLSA
>gi|56695239|ref|YP_165587.1| DNA-binding transcriptional activator GcvA [Ruegeria pomeroyi DSS-3]
MSDRLPPLTALRAFDAAARHMSFAKAAAELNVTPAALSFQIKSLEEHLGRPLFRRLNRAVELTEEGRALA
PGAQEGFEVLTAAWRAARRLQDNTTLTVTAGPALTAKWLAPRLYDFARAHPEIDLRISTSLRLVDLARDE
VDVAIRFGQGSDAGLYSVSARKEWMIPVMTPELANRFPTPESLRDAPLIFDESISFLDPPVDWPTWFRAV
GIDFTPQRGAHFSNADHAIDAAVAGVGVVLGRRPMIIKDVIEGRLVMPFKTAVETDARFRFVCLAGAETQ
PKIAAFRDWFLAEIAKTAHISDGLTIVHVRDIPPK
>gi|56695240|ref|YP_165588.1| acetoacetyl-CoA reductase [Ruegeria pomeroyi DSS-3]
MARTALVTGGSRGIGAAISKALKAEGYNVAATYAGNDEAATAFTAETGIATYKWNVADYDESAAGIAKVE
AEVGPIDIVVANAGITRDAPFHKMTPEQWHQVIDTNLTGVFNTVHPVWPGMRERKFGRVIVISSINGQKG
QFAQVNYAATKAGDLGIVKSLAQEGARAGITANAICPGYIATEMVMAIPEKVRDSIVAGIPAGRLGEPEE
IARCVTFLASEDSGFINGSTISANGAQFFV
>gi|56695241|ref|YP_165589.1| acetyl-CoA acetyltransferase [Ruegeria pomeroyi DSS-3]
MTNVVIASAARTGVGSFGGSFANTPAHDLGAAVLEAVVERAGIDKAEVSETILGQVLTAAQGQNPARQAH
VNAGLPKESSAWGINQVCGSGLRAVALGAQHILLGDAEIVAAGGQENMTLSPHAAALRAGHKMGDMKYID
TMIRDGLWDAFNGYHMGQTAENVAEQWQISREMQDEFAVASQNKAEAAQNAGKFADEIVPFIIKTRKGDI
VMDKDEYIRHGATIEAMQKLRPAFTKDGSVTAANASGLNDGAAATLLMTAENAEKRGIEPLARIASYATA
GLDPSIMGVGPIHASRKALAKAGWKVEDLDLVEANEAFAAQACAVNKDMGWDPAIVNVNGGAIAIGHPIG
ASGCRVLNTLLFEMKRRNAKKGLATLCIGGGMGVALCVERD
>gi|56695242|ref|YP_165590.1| EAL domain-containing protein [Ruegeria pomeroyi DSS-3]
MRTRIKKLADLPEGAENPLSAAISSRHRSTVAMATEAVRHGDCLLAYQPVLQTAPPHGIAFYEGFIRVLD
ETGRVIPARDFMPAVENTEIGRELDCVALETGLRALVRNPTLRLSVNMSARSIGYRKWMQTLERFLKRDE
ALGDRLILEINQTSAMAVPELVIDFMDRLQPRGIAFALDDFGDGPIDFNSFRDFFFDAVKIDGRFIRQVS
TDAANRATVRALIALAREFEMLIIAESVETEEDAAFLAENGVDCLQGYLYGAPTVTPVWEKPETAKASG
>gi|56695243|ref|YP_165591.1| hypothetical protein SPO0328 [Ruegeria pomeroyi DSS-3]
MIETLSFPDPTQLAVPFFIAAILIEFLWIAMKKRGGRYETRDAVTSLIMGAGSVAEGILLGFIAWAFFML
LWRVTPLDMGTSIWAVLICFVLDDLRYYWVHRFGHRVRWVWASHVNHHSSQHYNLTTALRQTWTGTFTFM
MVVKAPMVLLGFHPALVLFCGGLNLIYQFWIHTEAIDKLPRWFEAVMNTPSHHRVHHGRNPRYLDCNYAG
VFIIWDKMFGTFVPEQEDEKVDYGLVHNLGTFNPLRVAFHEWLGIWRDVTQPGLSLRQRLAYAFAPPGYS
HDGSRETSEGIKARYLATHPEQRGTPGFEG
>gi|56695244|ref|YP_165592.1| hypothetical protein SPO0329 [Ruegeria pomeroyi DSS-3]
MSFTLRCREGPMPLEILLILVIGGISTIAVILHLSGRSKRADLTLETARAAWLRHFPQDTVHDILLARDG
HAALVETETGPGLLWALGADTVGRRLQDYALSETADGLAIRFHDFTAPRVTLTLAPDETPIWQQRLARA
>gi|56695245|ref|YP_165593.1| cytochrome c peroxidase [Ruegeria pomeroyi DSS-3]
MSPKSLFSFSLTALSCTAGLAAANPLREQALELFQPLPSTVPAVKDNPITPEKIDLGKALFFDPRMSASG
VFSCNSCHNLATGGDDNLETSIGHGWQKGPRNAPTVLNAVFNAAQFWDGRAPDLAEQAKGPVQAGVEMAN
TPGQVVATLNSMPEYVAWFQAAFPDQPDPVSFDSFAKAIEAYEATLITPAPFDAWLNGDDAALSGEQKQG
LSLFIDAGCASCHGGVNLGGQDYYPFGLVETPDAEVLPSGDKGRFAVTATEDDEYVFRAAPLRNIAVTAP
YFHSGKVWELEAAVSIMASSQLGADLSEEETAAITAFLHSLTGEVPQVVYPVLPAETSGTPRPDGAVQR
>gi|56695246|ref|YP_165594.1| thiol:disulfide interchange protein, putative [Ruegeria pomeroyi DSS-3]
MKKLLLALVYTAAALGANPSLGLAADRAQIEALRDGDMKKLIVLPETRAVSQVPFQLADGAGEATLGDYK
GKVVLLNFWATWCAPCRKEMPQLSALQSELGGESFEVLTIATGRNSPAGIEKFFGEIGVDNLPRHQDPRQ
ALAREMAVIGLPITVLIGADGMEVARLIGDADWNSDSAKAIIQAVIE
>gi|56695247|ref|YP_165595.1| argininosuccinate lyase [Ruegeria pomeroyi DSS-3]
MTDKTSNQMWGGRFAAGPDAIMEAINASIGFDKRLAAQDIAGSRAHAAMLAATGVITDSDAEAIREGLLT
VLSEIEAGEFTFSTALEDIHMNVEARLKEIIGEPAGRLHTARSRNDQVATDFKLWVRDQFDAAEAGLLAL
LRALLGQAEAGADWVMPGFTHLQTAQPVTWGHHMMAYVEMFGRDLSRVRDARARMNESPLGSAALAGTSF
PIDRHMTAAALGFDRPTANSLDAVSDRDFALEFLSVASICAMHLSRFAEELVIWSSAQFRFVTLSDRFST
GSSIMPQKKNPDAAELIRAKVGRIFGANTALMMVMKGLPLAYSKDMQEDKEQVFDAADNWMLALAAMEGM
VRDMTANRDSLAAAAGSGFSTATDLADWLVRVLGLPFRDAHHVTGALVALAESKGCDLPDLSLDEMQSAH
AAITEDVYGVLGVENSVNSRQSYGGTAPAQVRAQVARWKEMLA
>gi|56695248|ref|YP_165596.1| putative lipoprotein [Ruegeria pomeroyi DSS-3]
MTPIRLTLALALTALISGCGADGEPVQPTVAANVGVSGSGTHVSGGVGLGKGPFNLWLGF
>gi|56695249|ref|YP_165597.1| diaminopimelate decarboxylase [Ruegeria pomeroyi DSS-3]
MDHFLYRDGALCAEDVPLAEIAATVGSPFYVYSTATLLRHFQLFDEALDGTDHLICYAMKAASNQAILRT
LAQAGAGMDVVSVGEYLRARAAGVPGVRIVFSGVGKTAEEIRVALVGGIRQFNVESEPEMEVINAIALEL
GKVAPITIRVNPDVDAKTHAKIATGKSENKFGIPIARASAVYAQAAALPGLEVVGIDVHIGSQLTDLAPF
ETAYRKVAELTERLRAEGHDIRRLDLGGGLGIPYTRSNEAPPLPMEYGALIKRTLGHLGCEIEIEPGRLI
AGNAGLMVSKVIYVKSGEGRDFLILDAAMNDLIRPAMYDAHHDIVPVVEPEPGVEPQPYDIVGPVCESGD
TFAKARMMPPLAAGDLVAFRSAGAYGAVMSSEYNSRPLIPEVLVHGDQFAVIRPRPSFDEMINRDTIPPW
L
>gi|56695250|ref|YP_165598.1| hypothetical protein SPO0335 [Ruegeria pomeroyi DSS-3]
MTRNRPPNLPLPRFALGLTHAGLWAERLWRGFWPFLSVLMLALAPILLGLHELVPVEWVWAFAAGFALVL
VVTLVLGLRRFRRPVRAEALARLDAALPGRPIQTLMDEQAIGAQDPASAALWRAHQARMAARVANAEPVA
PDLVLTRRDPYGLRFMAALCFVAALLFGSVWRVGSVVDLAPGAAQAATGPSWEGWIEPPRYTGLPTLYLN
DQTGEVLQLPQGSRITLRLYGEVGQLRLTEEVSGKPLERPDHPEQTVEVTRSGPFEIEGRGGRGWQVVML
SDTAPQVEIAGAAETRAGGQMVLPFAAMDDYGITGGRAVIALDLEAVDRRYGLRTDPDPRDPVVADLPLP
ITGDRREFTENLIEDFSQHPWAHLPVTITLIAQDAAGQEAETLPFGTALPARRFFDPLAAAVIEQRRDLL
WSRDNATRVAQILRAVSHRPDDVFRSQTAYLRLRVILRRMEALQRFGLKPAQQEEIAQALWDLAIMLEDG
TLSDALERMRRAQERLSEAMKNGASDQEIAELMQELREATQDYLRQLAQNQQNEQDGERQAQEGESLQMT
QDDLQKMMDRIQELMEQGRMAEAQQALEEFQQMMENMRVTQGQGDNGQSEGQRAMEGLAETLRNQQGLSD
QAFRDLQEQFNPGAQAGESQQNEGRNGGEGRGQSHEGQGQGSRQSGTGQDGAQQGEPGETGEGSLAERQQ
ALRNELGRQEQNLPGQGTPEGDAAREALDRAGRAMEGAEEALRENDLAEAIDRQAEAMEAMREGMRSLGE
ALAQQSQPGQGSQEGDQRARNQDPLGRTPGSQGGVDTDESLVPGDDVYRRARDLLDEIRRRSGESDRPKV
ERDYLKRLLDRF
>gi|56695251|ref|YP_165599.1| hypothetical protein SPO0336 [Ruegeria pomeroyi DSS-3]
MRLTCPNCDAQYEVPDEVIPPEGRDVQCSNCGHTWFQPPAGEALDADEGDAEDGFAPDAAPAPEEDTSES
PDQSDEQDDWDEDGELPDDKDEDSFDNDPAPTDPVQGRGVGPDVSDILREEAAREAELRAREAEALESQP
DLGLDAYPGDEPGRRAREAQDRMARMRGQEPVAQETDSTSRRGLLPDIEEINSTLRNSDAAAAAPAIHAG
PARRRRSGGFMRGFVVMLIFGAVLFLLYTNAPLVARTLPQADPMLSAYVALVDQARLWLDAQIGALIPR
>gi|56695252|ref|YP_165600.1| cell division ATP-binding protein FtsE [Ruegeria pomeroyi DSS-3]
MKPRAPSGKKSRKRQGADVIELENVGYSYGGGELLGEISVELSPGSFHFLTGPSGSGKTTLLKLCYGALL
ATSGQVRAFGEDMRRLDRDQMALFRRRIGVVHQDCRFLDHLPLTENIALPLTVSGHDLAGEHENLRELMA
WVGLSKRAEALPPELSGGERQRAALARAVIMSPDVVVADEPTGNVDWEMSQRLLQLLVELNRMGKTVLIA
THDLSLIRAAKSQVQARVLRISNKRLQLAGADL
>gi|56695253|ref|YP_165601.1| cell division permease protein FtsX, putative [Ruegeria pomeroyi DSS-3]
MSKGTIRALLMADKQADRVVPPSGFTAQLTLFVSGAMAFLAVFALALSLASGRLADRWASELAQAATLRI
NAPADQVAAQTQAALAILIQTPGVAEARALSREEQAALLTPWFGPDLPLDTLPVPQLIEIVGGTPAYDAQ
GLRLRLAAEVPGAVLDDHRRWREPLVDAANSLRRLALVSILLIGGATAAMITLAANAALAANSQVIEVLR
LVGARDRYIAGAFVRRFTLRALIGAAVGVLLGMGGVMLLPEASDEGGFLTGLGFRGIGWLLPLLIPVLGA
VVAFAATWHAARRRLKELA
>gi|56695254|ref|YP_165602.1| acyltransferase family protein [Ruegeria pomeroyi DSS-3]
MMMQWVRSIVFTIVIYIWMAILGLLFTPYALVSKKGALRACKLYARSTIWMARWMVGIHGEIRGPVPTGE
VLIAAKHQSFFDILLIFHAVPHGKFIMKRELLWTPVIGVYAKRLGCIPVNRGKRGAAVARMVKDVAKEFA
EPGQLVIYPQGTRVAPGVSKPYKVGSAVLYEGLQYSCIPVATNVGLFWPRDGLLRKPGRAVVEFLEPIPP
GVPRDAFMRRLETEIEGASDRLMREAGYETAQG
>gi|56695257|ref|YP_165603.1| 2-oxoglutarate dehydrogenase, E3 component, dihydrolipoamide dehydrogenase [Ruegeria pomeroyi DSS-3]
MATYDVIIIGAGPGGYVCAIRCAQLGLKTAVVEGRETLGGTCLNVGCIPSKALLHASHSLHEAQHNFAKM
GLKGKSPSVDWKQMLAYKDEVIEGNTKGIEFLFKKNKIDWIKGWASIPAAGKVQVGDDTHEAKNIIIASG
SEPASLPGVEVDEKTVVTSTGALELGKIPKSLVVIGAGVIGLELGSVYARLGAEVTVVEFLDVITPGMDG
EVQKTFQRILKKQGLTFVMGAAVQKTEIARGKAKVTYKLLKKDTEHEIEADTVLVATGRKPYTAGLGLDK
LGIEMTQRGQIKVGKDWQTNVPGIYAIGDVIEGPMLAHKAEDEGMAAAEQVAGKHGHVNYGVIPGVIYTT
PEVANVGATEESLKAEGRAYKVGKFMFMGNGRAKANFASDGFVKILADKETDRILGAHIIGPAAGELIHE
VCVAMEFGASAEDLALTCHAHPTYSEAVREAALACGDGPIHS
>gi|56695256|ref|YP_165604.1| hypothetical protein SPO0341 [Ruegeria pomeroyi DSS-3]
MCAGRAVAARCLNYRVAAGSDRCQQLHRDMGDAAAFVMHGQFLAVEKGLGRGEVGDLEKRHRMIGAIRVA
PDMQVADARRLAHRAILAEHLEPGVEIGHIGLPEGMGCHGSVSF
>gi|56695255|ref|YP_165605.1| hypothetical protein SPO0342 [Ruegeria pomeroyi DSS-3]
MATHALWQADVADFDAWLKVFREDRAMRKAAGIRDLHIWRDPDRADHAVALFEITNLASAQAFFDSEELA
MHHERGGIAHITVKLLTPV
>gi|56695258|ref|YP_165606.1| dihydrolipoamide succinyltransferase [Ruegeria pomeroyi DSS-3]
MVPTLGESVTEATVSTWFKKVGDSVAQDEMLCELETDKVSVEVPAPASGVLTEIVAAEGATVNASAKLAV
ISGSASGASPAPAAPAAAVTPAVATGKDIANAPSAEKAMAEAGITPAQVTGTGRDGRIMKEDVTAAVAAA
AAAPAPAAAAPAPAAAPRAPALAEDAAREERVRMTRLRQTIARRLKDAQNTAAILTTYNEVDMTEVMALR
NTYKDAFEKKHGVRMGFMSFFTKACCHALKEVPEVNAEIDGQDIVYKNYVHMGVAAGTPQGLVVPVIRDA
DQMSFAEIEKAIAEKGKRARDGKLSMAEMQGGTFTISNGGVYGSLMSSPILNPPQSGILGMHKIQDRPMV
INGEIKIRPMMYLALSYDHRIVDGKGAVTFLVRVKEALEDPRRLLMDL
>gi|56695259|ref|YP_165607.1| 2-oxoglutarate dehydrogenase E1 component [Ruegeria pomeroyi DSS-3]
MTEQSPNSQFHASSFMQGHNAEYLEQLYARYANDPGAVDAAWAEFFRAMGDAETDVKKEANGPSWARADW
PPMPADDLTGALTGQWAEIDAKAAGGKIKEQAAKAGVPVSDDQIKRAVLDSIRALMIIRAYRIRGHLVAD
LDPLGMRANTLHPELDPKTYGFADSDMDRPIFIDNVLGLTHASMRQILDIVKRTYCGTFALQYMHISNPE
EAAWLKERIEGYGKEISFTREGRKAILNKMVEAEGFEKFLHVKYMGTKRFGLDGGEALIPAMEQIIKRGG
ALGVREIVIGMPHRGRLNILANVMGKPYRAIFNEFQGGSFKPEDVDGSGDVKYHLGASSDREFDGNTVHL
SLTANPSHLEAVNPVVLGKARAKQDQFGDKDRTSVMPVLLHGDAAFAGQGVVAECFQLSGIRGHRTGGTM
HIVVNNQIGFTTAPHFSRSSPYPTDIALMVEAPIFHVNGDDPEAVVHAAKVATEFRQKFRKDVVLDIFCY
RRFGHNEGDEPMFTNPIMYKKIKSHKTTLALYTERLVRDGLIPEGEIEDMKAAFQAHLNEEFEAGKDYKP
NKADWLDGRWSHLDKNKEEYVRGETAITPETLAAVGNALTRAPEGFSLHRTVERLLETKKAMFDSGTGID
WATGEALAYGSLLTEGYPVRLAGQDATRGTFSQRHSGLISQDSEERYYPLNNIRKGQAQYEVIDSMLSEY
AVLGFEYGYSLAEPNALTLWEAQFGDFANGAQIMFDQFISSGESKWLRMSGLVCLLPHGFEGQGPEHSSA
RLERFLQMCGQDNWIVANCTTPANYFHILRRQLHRTFRKPLILVTPKSLLRHKLAVSRTEEFTTGSSFHR
VLWDDAQYGNSDTKLVADDKIKRVVLCSGKVYFDLLEERDARGIDDVYLLRIEQYYPFPAHSLINELERF
KGAEMVWCQEEPKNQGAWSFIEPNIEWVLTRIGAKHTRPTYVGRATSASPATGLASQHKAQQEALVNEAL
SIEGK
>gi|56695260|ref|YP_165608.1| hypothetical protein SPO0345 [Ruegeria pomeroyi DSS-3]
MTFGQSIGTCFAKYITFSGRASRPEYWYFFLFLLLGSIAATMLDALLFDAVTTTVETSDTSTSARIENTG
PIAPIFSLAVFLPHLAVAFRRMHDTGRSGIYAILPFLLMLCAVLVLVFGVGIASSFAAGGSLDLLFTRAT
LLLLIPTLAVLFISPLLVLWWLTRPSQPGTNQYGPNPVRAVAS
>gi|56695261|ref|YP_165609.1| succinyl-CoA synthase, alpha subunit [Ruegeria pomeroyi DSS-3]
MAVLIDENTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGMEHLGLPVFNSVHEAKHVTEANATV
IYVPPPFAADSILEAIDAQMEVIVCITEGIPVLDMMKVKRALEGSSSRLIGPNCPGVITPDACKIGIMPG
HIHKRGSVGVVSRSGTLTYEAVKQTSDIGLGQSTAVGIGGDPIKGTEHIDVLEWFLADDETESIIMIGEI
GGSAEEEAAQFLKDEAKKGRKKPVAGFIAGRTAPPGRRMGHAGAIVAGGKGGAEDKIEAMRSAGIVVADS
PATLGEAVLEAIGK
>gi|56695262|ref|YP_165610.1| succinyl-CoA synthetase subunit beta [Ruegeria pomeroyi DSS-3]
MNIHEYQAKALLRSYGAPVSDGRVVLRAEDAKTAAGELDGPLWVVKAQIHAGGRGKGKFKEADAGEKGGV
RLTKSVEEAAEEAKKMLGRTLVTHQTGPVGKQVNRIYIEAGSGIERELYLALLVDRQTSRISFVCSTEGG
MDIEEVAASTPEKILSFSVDPVTGYQPYHGRRIAFSLGLEGPQVKQCVALMGLLYKAFVEKDMEMLEINP
LIVAEGGSLKVLDAKVGFDGNAIYRHSDIAELRDTTEEDPKELEASKYDLNYIALDGEIGCMVNGAGLAM
ATMDIIKLYGAEPANFLDVGGGATKEKVTEAFKIITSDPNVKGILVNIFGGIMRCDVIAEGVVAAVKEVG
LQVPLVVRLEGTNVEKGKEIINTSGLNVIAADNLSDGAEKIVKAVKG
>gi|56695263|ref|YP_165611.1| hypothetical protein SPO0348 [Ruegeria pomeroyi DSS-3]
MVPAPSERVARAVMYFREGGSGQASWAVVTTCREPTVLVLAFVAHHLALGADYVELYLDAPDPELQEALA
DLPGCRVTLCDDAYWQQELGGPRPATNEKRQIRNASRAYLQAEADWLLHLDADEFLETDLVMARILGGLP
EAVDFLHLPNLERVFDAAEPQEQLFDGYMRAPLLRGWPDQADLLDPAIQPFLHRGVVAHSQGKSAVRVGR
KLWPGIHSPRAPSGHDRPLLWPAVNARVLHYDGLTGFHWIMKLLRGWTDRGGGAAAHAGLAPARQAQIAY
VDENRGDMFALLQLHQRLKALPLVDLERLEAIGLLWRPRIDPGAALRALGLTADLSRVGFDEGLELDIPD
FDRHRIRWRRLYRLHFAEAGRKQG
>gi|56695264|ref|YP_165612.1| malate dehydrogenase [Ruegeria pomeroyi DSS-3]
MARPKIALIGAGQIGGTLAHLVALKELGDVVLFDIAEGTPEGKALDIAESGPSEGFDAKLKGTQSYADIA
GADVCIVTAGVPRKPGMSRDDLLGINLKVMKSVGEGIRDNAPDAFVICITNPLDAMVWALQQFSGLPANK
VCGMAGVLDSARFRHFLAEEFNVSMKDVTAFVLGGHGDTMVPSVRYSTVAGIPLPDLIKMGWTSQEKLDA
IVQRTRDGGAEIVGLLKTGSAYYAPATSAIEMAEAYLKDQKRVLPCAAYCNGELGVKGMYVGVPTVIGAG
GIERIIDVSLTKEEQDMFDNSVNAVKGLVEACKGIDGSLA
>gi|56695265|ref|YP_165613.1| hypothetical protein SPO0350 [Ruegeria pomeroyi DSS-3]
MLEPDIGFFAVTIPAVIFAGISKGGFGSGVAFASASILAIYLDPGQALALMLPLLMLIDLATLKPYWRRW
SWPDARLLILGGLPGVALGALLYRATDADLLRLLIGGISLAFVAWQMLRGRGWMREFASRLPPAAGLLAG
AVAGFTSFVSHAGGPPAAVYLLSQRLGKTEFQATTVLTFWALNIAKFVPYAWLGMFTLDTARAGLLLAPF
ALLGAWLGVRAHHMVPERAFFALAHAMLTLTGLKLIWDALV
>gi|56695266|ref|YP_165614.1| hypothetical protein SPO0351 [Ruegeria pomeroyi DSS-3]
MKTMMIKMTMGLGLMALAAGQLQAQGNNCAPRQMVLDQLAQKYGEARRGIGLVQQGSVMEVFASDETGTW
TITVTLPNGMTCMVASGQSYEALAEALPTSGNDA
>gi|56695267|ref|YP_165615.1| citrate lyase, beta subunit [Ruegeria pomeroyi DSS-3]
MDPRQRPYRSVLYIPGSKERALDKARSLPVDAIIFDLEDAVAADEKDNARETLKAALAQGGYGARVKIVR
INGLDTPWGHADAEAVRDMDADVVLLPKVGGAADVDALAAITGDLPIWAMMETPRGMLNAAQIAAHPLLT
GFVMGTNDLAKELQTRFRADRLPMMSSLGLCLLAAKAEGLIAIDGVYNAFKDGEGLAAECAQGRDMGFDG
KTLIHPAQVEIANTAFAPSEAEIDLARRQIAAFAEVEASGQGVAVVDGKIVENLHVATAREVLAKAEAIL
ALQAG
>gi|56695268|ref|YP_165616.1| NnrU family protein [Ruegeria pomeroyi DSS-3]
MGFVLLILGIAVWWAAHLFKRAMPARRAAMGDRGKGMVALALLGSVVLMVIGYRMTDYIHVWAPPSYLTH
ANNLLVLVAIWMMSPAGTKGKLLHKMRHPMLAGFRAWAAAHLLVNGDLASIILFGGLFLWGIVEVAAINA
AEPEWTPGEPGTLGKDAMFLVASVVLMAVIGYIHGLVGPWPFPA
>gi|56695269|ref|YP_165617.1| hypothetical protein SPO0354 [Ruegeria pomeroyi DSS-3]
MAKLYRLLTEEDTAAFCHKVSDALAKGWELYGSPAYAYDAANGIMRCAQAVTKEVEADYSPDMKLGQH
>gi|56695270|ref|YP_165618.1| hypothetical protein SPO0355 [Ruegeria pomeroyi DSS-3]
MAKTNPGRFFEDYTVGQTLHHAVPRTVTNGERALYHALYPARHALYSSDAFAQSCGLPGSPIDDLAAFHV
VFGKTVPDVSLNAVANLGYAEGRWLKPVYAGDTLRSVSEVIGLKQNSNGKTGVVYVRTRGLNQRDETVME
YVRWVMVRKRDLDAPAPEIVVPELKKALAPNDLVVPEGLDFTAYDFALAGEPHRWGDYAVGETIDHVDGV
TVEEAEHMLATRLWQNTAKVHFDLTFRPDGRLIYGGHVISMARALSFNGLANAQIIVGLNGGAHANPCFA
GDTIKAWTEVLDKAETAAPGVGALRLRLVATKGGAPFALHGEDGKYLPEVLLDLDYWVLMPK
>gi|56695271|ref|YP_165619.1| hypothetical protein SPO0356 [Ruegeria pomeroyi DSS-3]
MGADAEIISAFHLGDFGMRFVLSALLCLATPVAADDADFVRSNLTAILYHEFGHALIDILGLPVFGQEED
AADVASILLIDALYEEAGATDIAIDAAFGFLAEAEAVGDEIAWWDVHGPDLQRYYNLVCLFAGADLESRS
DIALELDLPQERLDSCGEEFDIAYDSWGPVLDEISGAGQSMTYVGPKAGLSAEVVSEEVAVFNDLFHLPE
PLEFRVEPCGEANAYYDPEAVSITLCTEFEDWLFEQAPLTRM
>gi|56695272|ref|YP_165620.1| von Willebrand factor type A domain-containing protein [Ruegeria pomeroyi DSS-3]
MSFWRVFLFGLFLTPPAAACDLALALAVDVSGSVDEGEYRTQMDGLAHALRDPVVSEALVRAEAQLMLVQ
WTGSDRQRVTIPWTQASSFDALDRFADRVAADPRIWRNYSTAIGEALEVTMAAFAQVPDCARHLIDVSGD
GPSNEGIEPLAVHRDLRALGITVNAIAIEQSEPDLTAYFYENVIVGEGAFVETANGFADYPARIRKKLLR
EVTQQTAALD
>gi|56695273|ref|YP_165621.1| succinate dehydrogenase, cytochrome b556 subunit [Ruegeria pomeroyi DSS-3]
MADVNRGNRPLSPHLSIYRPQLTSITSILTRITGNALLFAALLIVWWFLAAATSPEYFAVADGVITSLIG
DLVMALSLWGLWYHTLAGIRHLIWDNALGLDLPTAEKLGWAVVIGSVLLTILTLVVIA
>gi|56695274|ref|YP_165622.1| succinate dehydrogenase, hydrophobic membrane anchor protein [Ruegeria pomeroyi DSS-3]
MRYLTDRKRAVGMGSAKTGTAHFWAMKVSSVALLILIPLFVFTFGPMLGEPHQAVLDYFSRPFPAIVAAL
TLVVGFKHFADGAQVLIEDYVHGLMQKILIILVICLSYAAAATGLFAIARIAL
>gi|56695275|ref|YP_165623.1| succinate dehydrogenase flavoprotein subunit [Ruegeria pomeroyi DSS-3]
MAAYEYETHEYDVVVVGAGGAGLRATLGMAEQGLRTACVTKVFPTRSHTVAAQGGIAASLSNMGPDHWQW
HMYDTVKGSDWLGDTDAMEYLAREAPKAVYELEHYGVPFSRTEEGKIYQRPFGGHTTEFGEGPAVQRTCA
AADRTGHAILHTLYGQSLKNNAEFYIEYFAIDLIMSEDGQCQGVVCWKLDDGTFHVFNAKMVVLATGGYG
RAYFSATSAHTCTGDGGGMVARAGLALQDMEFVQFHPTGIYGSGCLITEGARGEGGYLTNSEGERFMERY
APQYKDLAPRDYVSRSMTMEIREGRGVGKDGDHIHLNLSHLPAEALAERLPGISESAKIFAGVDVTKEPI
PVLPTVHYNMGGIPTNYWGEVLNPTADNPTAIVPGLMAVGEAGCASVHGANRLGSNSLIDLVVFGRASAI
RAGKVVDPEAANPVLNLASVEKAFDRFDGLRNAKGSVATADLRLEMQKTMQADAAVFRTAKTMAEGVEKM
TAIAAKMDDLSVTDRSLVWNSDLMETLELTNLMPSALATIVGAEARKESRGAHAHEDFPTRDDENWRVHT
ISRVEGNKVELSYRPVITEPLTTEEQGGIALKKIAPKERTF
>gi|56695276|ref|YP_165624.1| succinate dehydrogenase iron-sulfur subunit [Ruegeria pomeroyi DSS-3]
MVQLTLPKNSRLTTGKTWPKPEGATNLRKFQIYRWNPDDGQNPRVDTYFVDMDDCGPMVLDALIYIKNKV
DATLTFRRSCREGICGSCAMNIDGINTLACIYGMDEIKGDVKIYPLPHMPVVKDLIPDLTHFYAQHASIM
PWLETKTNRPAKEWKQSIEDRRKLDGLYECVMCASCSTSCPSYWWNGDRYLGPAALLHAYRWIIDSRDEA
TGERLDNLEDPFKLYRCHTIMNCAKTCPKGLNPAKAIAEIKKMMVERTV
>gi|56695277|ref|YP_165625.1| type I secretion target repeat-containing protein [Ruegeria pomeroyi DSS-3]
MPTLTELNSEYSVVSSGLAQSGPQNAALSDGRQVVTWQTRTGLLYFKIVDSEGKSTGSSTLVSTIVGPNS
PSDVKTLSDGSFIVVYTEQISSNNSEIRATRYSDTGQKIGTEMNLMTDAREILFAPTVTSLSDGGFAVLS
GGYSSSDSDHSTFVRAFDIDGTPRGPMAQLDLTTAGKQVFPEAVGVENGGLVAVWTSGTGDGSGTSVKMR
LVDGNGVPQGREIQVNQYTPSDQQEPAIARLDDGSVIVVWHSKGQDGSEGSIIARHFSAQGVPQGNEFIV
NVTRAGEQTLPTVVALNEGGFVVAWTNLTSRPDTMARQYDYNLRPVTGEIKLSQGSLSRDIGPELSALSN
GGVGFVWMDISVVASLPTLGVEVRTTHPSDFNPTEGNDLLSGDAGNNRIFARDGDDWVSPGIGSDTVDGG
AGNDMVSFIDHRQAVRVDLSEGRVTSGRDINHLSNVENVTGSSFADYIVGDDGDNRLRGAGSYDWFIGSD
GADFYDGGSGRDMVSYVSSSGAVQVDLTRGRGQGGMAEGDRYQSIERVTGSSFEDHLTGDAGDNDLRGLG
SYDWFVGTAGRDRYDGGSGLDMISYASSSAAVSVDLSQGRGTRGDAAKDSYVSVERVTGSSHDDVLIGDD
GRNVLRGLYGEDTLLGNAGVDRLHGGASDDFLDGGAGWDFAIFDGNRDDYNVTRQGERTLVERVSPGNEG
IDTLVNIEVIQFQDDFLYL
>gi|56695278|ref|YP_165626.1| hypothetical protein SPO0363 [Ruegeria pomeroyi DSS-3]
MCPEFKLRRREGPNLTQRMTPMKAANKPASPQIPAHQALALLEQAWAYYTPEPVPAAQEEQPDLFQYANA
A
>gi|56695279|ref|YP_165627.1| decarboxylase, pyridoxal-dependent [Ruegeria pomeroyi DSS-3]
MEMTLNAVVTGPLACESATLSRAETFILANRFDRPTLVIDTQAVARQFAALAQGLGRAGIHYAVKANPLP
EILSTLARLGSNFDAASRVEIELCLAAGASADRISFGNTVKKPADIAWAHAAGIALFAADAEDELDKIAA
HAPGAKVYIRMIVEACQADWPLSRKFGCAPDKAIAVLDYARSVGLDPVGLSFHVGSQTRRAEMWVPVLDQ
VAAVWHAARAAGHDLSLLNIGGGFPAFYGQEVDAPELYAAEVIRLVGERFGDVGQIMAEPGRGMVAEAGA
IAAEVLLVSRKSGHDLHRWVYLDIGKFSGLAETMDEAIRYQFLTEREHEPTGPCILAGPSCDSADVLYEK
KPVQLPLGLRDGDRIVIRNCGAYTSTYASVGFNGFPPLDVVAI
>gi|56695280|ref|YP_165628.1| hypothetical protein SPO0365 [Ruegeria pomeroyi DSS-3]
MTDAPADAPLDADARRAVKPVICYPNDSLPRPDLALYRAARASARKTGEVLVPPREGRCFEVKAGQFFRI
SSVEGPQVGDLNLHNLHDLTERFFSGKTRALHGTHVTTGERLWSNLPYLRPMATIIEDTLGWYGIDQYGG
SVHDVIGTRCDPYTGNLLAGGHYHHCCHSNLTRALADHTGLPLHEAEMLVHDVLNVFMCTGFTRDTGQYF
MKASPVRPGDYLEFFAEIDLLGNLSACPGGDCSSEHSSDTASCHPLLVEIFAPAEGMLGDWPSPSVNGYD
RSHGR
>gi|56695281|ref|YP_165629.1| purine nucleoside phosphorylase [Ruegeria pomeroyi DSS-3]
MTIHIGANPGEIAETVLLPGDPYRAKWAAETFLDNPVLVNEVRGMLGFTGMWRGNRVTIHGSGMGMPSLS
IYANELIRDYGAKTLIRIGSCGGMQDSVEVRDVILAMTASTLGTPSRGIFRELSFAPCADWSLLHAAARA
AEDKGVRTHVGGIYSSDVFYDERPDLNEQMVRHGVLGVEMEAAELYILAARHKCRALAVLTVSDHLLTGA
ALPSAERETSFGDMVEIALHAAFPGA
>gi|56695282|ref|YP_165630.1| H-NS family DNA-binding protein [Ruegeria pomeroyi DSS-3]
MGIDLSGMSRKELISLRDQVDGAIKAAEQRERQEALKAAEKAAAEFGFSLSELSGEARRSTKGTKAQAKY
RNPANPEQTWSGRGRKPQWVHDAIQGGADISELEI
>gi|56695283|ref|YP_165631.1| methylmalonyl-CoA mutase [Ruegeria pomeroyi DSS-3]
MSQMQKDRQTANPDRKADRPWLIRTYAGHSTAKASNTLYRNNLSKGQTGLSVAFDLPTQTGYDSDHVLAR
GEVGKVGVPICHLGDMRVLFDQIPLEQMNTSMTINATAPWLLALYIAVAEEQGADVSKLQGTVQNDLIKE
YLSRGTYVCPPKPSLKMIADVAEYCYTNVPKWNPMNVCSYHLQEAGATPEQELAYALATAIAVLDELKPR
VPAEDFPALCGRISFFVNAGIRFVTEMCKMRAFVDLWDEILESRYGVSDPKFRRFRYGVQVNSLGLTEQQ
PENNVYRILIEMLAVTLSKKARARAVQLPAWNEALGLPRPWDQQWSMRMQQILAYETDLLEFGDLFDGNP
VVDAKVEELKAGARAELANLDSMGGAVASIEYMKSRLVDSNAERLNRIERNETVVVGVNRWTEGEPSPLQ
TEDGGIMVVDPAVEQEQIARLESWRADRDDAAVAAALEALRAAARTGANVMEPSIAAARAGVTTGEWAEE
MRKAYGTYRGPTGVSGSVSNKTEGLEDLRAAVDAASDKLGRRLKFLVGKPGLDGHSNGAEQIAFRARDCG
MDISYDGIRLTPEELVASALDQQAHVVGLSILSGSHLPLVEEVMERMKKAGLAHIPVIVGGIIPDEDSQK
LRAMGVAKVYTPKDFELNGIMGDIVTLVSDTEIAAE
>gi|56695284|ref|YP_165632.1| acyltransferase family protein [Ruegeria pomeroyi DSS-3]
MQSDGLFASATWTALRFWFGNKVSLEGSKSQFSGHVNSLHRGNHRAHQTIVRPRIWWQGAGMTQTVELPL
WLFVLIVLFAAVTFASHFLFPSVRWFFRRRLERAVARLNTRLARPIQPFKLARRHDMIQRLIYDPEVARA
VRDQAQAEGIPEAVAFEQAQRYAREIVPGFSAFAYFSFAIRLARFLSNALYRVRLRHVDAEALRAIDPEA
TVVFVMNHRSNMDYVLVTYLAAEQSALSYAVGEWARVWPLSRLIRAMGAYFIRRKSRSDLYRKVLAAYVR
HATDAGVTQAMFPEGGLSLSGGLGRPKLGLLKYIVDGAIPEGRDVVFVPVSINYDRVLEDTILTAAASRG
ERRFRARIGVITMWFLKQMWWRMTGRFHRFGYAAVSFGRPLSLSEFRVRTKGDPTVPLARELMSRIGVVV
PVLPVPLVAWLILRNGPMTRSALAAGFDKVLAALPHAHIHMPRDDRHYAIEVGLRQLIERRIIVETDGRF
GPGTERQDLLTYYAASIAHLMDGGAAYAEELSAIAGS
>gi|56695285|ref|YP_165633.1| crotonyl-CoA reductase [Ruegeria pomeroyi DSS-3]
MALDTDSGIASYAAPEKDLYEMGEIPPMGFVPKKMYAWAIRKERHGDPDTAMQVEVVDVPTLDSHEVLVL
VMAAGVNYNGVWASKGVPISPFDGHGQPYHIAGSDASGIVWAVGDKVKRWKVGDEVVIHCNQDDGDDEHC
NGGDPMYSPSQRIWGYETPDGSFAQFTNVQAQQLMPRPKHLTWEEAACYTLTLATAYRMLFGHEPHDLKP
GQNVLVWGASGGLGSYAIQLINTAGANAIGVISDESKRQFVMDLGAKGVINRKDFNCWGQLPTVNTPEYA
EWFKEARKFGKAIWDITGKGVNVDMVFEHPGESTFPVSTFVVKKGGMVVICAGTSGYNLTFDVRYMWMHQ
KRLQGSHFAHLKQAMAANQLMVERRLDPCMSEVFTWADLPEAHMKMMRNEHKPGNMSVLVQSPRTGLRTL
EEVLDARG
>gi|56695286|ref|YP_165634.1| autoinducer-binding transcriptional regulator LuxR [Ruegeria pomeroyi DSS-3]
MGRKVNLNPILEDLDATSALEDLERVTIKLRDTLEIDHIVYHWVDSAGDQYGCATYPKAWQERYLERNYH
RIDPVILGCFQRFHPVDWKRLDWSGKVAKAFLQDALKHGVGNQGYSIPIRGPNGQFALFTVNHVCDDQAW
SEFTEIYGRDLILIAHFFNRKALEFERSRQPDQPRNLSPREVDAMTLLALGYSRAQVAHSLSISEHTLRV
YIESARFKLGALNTTHAIATAMSRGLIVV
>gi|56695287|ref|YP_165635.1| autoinducer synthesis protein [Ruegeria pomeroyi DSS-3]
MLRYLYADELHQYPKLARSMFLDRADQFKTRLGWDVHVNEDGEERDQYDALNPLYVIWEEPDGSHGGSMR
FLPTTGPVMINDVFGHLTGGSPICSPLIWEVTRFCMSRRASSRVAGAIMLSGGEVMEGFGLTHIAGVFDE
RMIRIYRLIGSSPEVLGSEGEGRDRISVGLWPFSPADCARVSERAGISRELSRLWFNRAFGKVNRRRFAQ
TG
>gi|56695288|ref|YP_165636.1| helicase, ATP-dependent, putative [Ruegeria pomeroyi DSS-3]
MAVIGKAGSGKTLLLAELCKALTTAGVQVVSGDYEGRKSKDRRTLAVLAPTNKAASVLRLRGVPATTIHR
ILYTPVYDPDYERIAEWLAGNGERPEIEGLSDEALDRAAAFYARNSSIPGALAAAGLRGSDFITGWKRRE
EPLDIGFIDEASMLDDRQFEDLKEIFPTLILFGDPAQLAPVNQSGSMVFDALPEPRKLTLSRIHRQEADN
PILDLAHALADPAVDFEAFERMVEDKARQDDRVVWGGRVEVDLMARSPVLVWRNATRIRLINAFRSVHGA
PETELLEGEPLICDGIELPLKHRKKRLDLEARGLIKGAQVIYLGPGRKPGFSRLHVMGAEDPQVSAASIV
KIEKPDEEEPFIPFAARMGATFLHGAAVTIHKAQGSQWETVQVFAPDIYAAARAGRVEAGQPLWKRLAYV
AITRAQERLIWVVRNRLSKPTYPLRVDDLRQAAAPVLTLEEEQEA
>gi|56695289|ref|YP_165637.1| hypothetical protein SPO0374 [Ruegeria pomeroyi DSS-3]
MAPQGGIEMHRILLAALLLLAAPLTATATEEQVVLGLSRDRVAITADFDGSDILIFGAIKRETPIPDGDP
LQVIVAVSGPSAPVLVRRKEKKLGIWVNTDSVLVDSAPSFYAAATSAPFSQALSDTEDLRHRVSIRRAIR
SVGADMNIADAQEFTRAVMRIRQNEGLYSIRENTVAVDEQTLFRTEIDMPANLTEGEYIARIFLTRGGRV
VSSFQTTIDVRKVGLERFLFNLAHQQPVLYGLMSLAIAIAAGWGASAAFRALRGN
>gi|56695290|ref|YP_165638.1| membrane protein [Ruegeria pomeroyi DSS-3]
MAGHAGLTKNMQIYLPIAEVSVNAFLLLGLGGMVGILSGMFGVGGGFLMTPLLFFIGIPPAVAVATEANQ
IVASSFSGVLAHFRRRTVDFRMGTILLIGGLSGAALGVVLFNYLKSLGQVDLLVKLCYVVFLGIIGGLMF
IESLNAIRKSRKAGGAVPKRRQRGWIHAMPFKMRFRTSGLYISVIPPIVVGLLVGVLSAIMGVGGGFIMV
PAMIYLLGMPTKVVVGTSLFQIIFVTAFTTMLHATTNYTVDVVLAVLLLVGGVIGAQIGTVIGARMKAEQ
LRILLAGLVLAVCAKLALDLLLMPSELYSLGASGGH
>gi|56695291|ref|YP_165639.1| sugar ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MMDFLTIIQVLDSTIRLSTPLLLACLAGLYSERAGIFDIGLEGKMLMAAFFSAAVAAVSGSVWLGLLAGI
ASSLVLAGLHGLASITFRGNQLISGVAINFLAAGMTVLVAQDWFKQGGRTPSLFGGARFEPIDWPLAETL
SGIPVLGPIYAELLSGHSVLVYLAFLAVPGTWWLLYRTRFGLRLRAVGENPAAVDTAGVSVVGLRYAAVM
ICGVLCGIAGAYLATALQAGFVKDMTAGRGFIALAALIFAKWRPLHAMWACLLFGLLQAVALRFQNIDLG
GVVIPVQVMDALPYILTVVILAGFVGKAIPPRAGGEPYVKER
>gi|56695292|ref|YP_165640.1| sugar ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MDKMPKWADVVLIPLISLILAAILSALVILGIGEDPVAAVNMMVSGALGSTYGWGYTLYYATNFMFTGLA
VAVAFHARLFNIGGEGQAMLGGLGVAMICLYIPWPHWTMALLAACAASMLFGAVWAAIPAYLQARRGSHI
VITTIMFNFIAAALLNYMLVNVMRPDGSMDPASERFPAAVHLPTLHELLAPIGISFSKAAPANVSLLVAV
LACVVVWALIWRTRLGYEIRAYGHSESGALYAGISPFKITMVAMLISGALAGLMATNNVMGEAERLVLNS
TEGAGFIGIAVALMGRSHPFGVFLAAILFGFLYQGGAELALWTNIPRELIVVIQALVILFTGALDNMVRM
PLEKVFLALRKGNA
>gi|56695293|ref|YP_165641.1| sugar ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MTVPAIELKGISKSFGPVQANKDISISVAPGTIHGIIGENGAGKSTLMSILYGFYKADKGEIWINGKKTE
IPDSQAAIAAGIGMVFQHFKLVENFTVLENIILGAEDGGLLKPSLAKARRTLAELAAEYELNVDPDAVIE
EIGVGMQQRVEILKALYRQAEILILDEPTGVLTPAEADQLFRILHRLKDEGKTIILITHKLREIMEATDT
VSVMRRGEMTATVKTAETSPEHLAELMVGRKVLLRVDKVPAKPGKPILEIENLRVTDEKGVERVKGIDLT
VRAGEILGIAGVAGNGQSELLEVLGGMRPGSGAIRLNGAPLPLSGPGSDARARRTAHVAHVPEDRQREGL
IMDFHAWENVAFGYHHDPAYQSGIFMNNAALRADTERKIEKFDVRPADGWLAAKNFSGGNQQKIVVAREI
ERNPDLLLVGQPTRGVDIGAIEFIHKQIVALRDQGKAVLLVSVELEEIFGLADRIAVMFDGHIMGERLPD
ETDEKELGLLMAGVNGEAA
>gi|56695294|ref|YP_165642.1| sugar ABC transporter, periplasmic sugar-binding protein [Ruegeria pomeroyi DSS-3]
MTLMKSLMGAAAAMALTAGAALAEPALIFDLGGKFDKSFNEAAFNGAQRWAEETGGSFREIELQSEAQRE
QALRRFAEAGANPVITMGFAMADPLSAVAADYPDTKFVAVDVTWLDAPNIRQIGFAEHEGSYLVGMMAAM
ASKSGTVGFVGGMDIPLIRHFGCGYAQGVKAVNPDVKIVANMTGTTPAAWNDPVKGSELTKAQISQGADV
VYAAAGGTGVGVLQTAADEGILSIGVDSNQNHLHPGKVLTSMLKRVDVAVYDAMKAGENLETGVFNMGLA
EEGVGYALDDNNAALISGEMKAAVDQARQDIIDGKLNVVSYYENDSCPALKF
>gi|56695295|ref|YP_165643.1| ribosomal-protein-alanine acetyltransferase, putative [Ruegeria pomeroyi DSS-3]
MTPTELARLHARAFTQSRPWSESEFAALLGNPHTHLVGDLRCFALFQVIAGEAELLTIATDPDQRRQGLA
RACMDAWQAQAARAGATRALLDVAADNDPAIALYTACGYAPCGLRRGYYRRPSGETADAIVMERPLP
>gi|56695296|ref|YP_165644.1| protease, putative [Ruegeria pomeroyi DSS-3]
MPSDPVILAFDTSAAHCAAALLVGDRIVAATAEEMTRGQAERLMPLLEEVLAGAGLGWHDLDAIGVGIGP
GNFTGIRISVSAARGLALGLGIPAVGVDGFEARALLTPLGVHPAIPAPRDHVYLAPDGGTPQLLPRDQAE
ALGPLQAEYSPQGLAEAIARAAAPRWRDATIPPAPLYVRPADAAPSRDRPPVLLDP
>gi|56695297|ref|YP_165645.1| NifU domain-containing protein [Ruegeria pomeroyi DSS-3]
MFIQTESTPNPATLKFLPGQTVLEVGTADFPSAEAAEKSPLAARIFAVSGVTGVFFGNDFVTVTKAEGVE
WDHIKPAILGAVMEHYQSGQPVMGADAQTGSGHAEHSGEDAEVVTQIKALLDSRVRPAVAQDGGDITFHG
FDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRHYIPEVTEVRPVAV
>gi|56695298|ref|YP_165646.1| acyl carrier protein phosphodiesterase, putative [Ruegeria pomeroyi DSS-3]
MTKLLQIIASPRGGDSKSNALADAFVAAQRAKDSTLQVDHLDLWAEDLPAFDGDPAAAKMTFFGVGQMDP
SKEQAWSAVARITERFMSADHVVMGVPMWNGGIPYRLKHYIDIITQPGMLFGFDPDNGYSGLLRNRKATV
VTTSGVWSEGADARFGSDFHSTYLKWWFETIGITDVTFVRYQPSLLTDDPQAGYDRALAALTAA
>gi|56695299|ref|YP_165647.1| hypothetical protein SPO0384 [Ruegeria pomeroyi DSS-3]
MQTALPPPYLIADDPGLELLNSTGAPYGTEIDWLQNGTEMLAWMQAVGLLGATEAELVRSTLGARELDAA
ASDLRDLRAMFRENVPVASAGFVDRLNACLAETSGHARIVMTEAGTQELQHVQRFRTGRDLVGLCALAIA
ELLSQGESGRTRQCGGPTCTYWFRDVSKNNRRRWCSMAVCGNRAKVATHRARARSE
>gi|56695300|ref|YP_165648.1| 2-hydroxychromene-2-carboxylate isomerase, putative [Ruegeria pomeroyi DSS-3]
MGKRIAFWFEFASTYSYLSAMRIERAAADLGVTIAWEPFLLGPIFAAQGWTSSPFNLFPAKGRYMWRDME
RLCARQGLPLTRPDPFPQNGLPAARLAMVAREMGHIAPFVRAVYAAQFGRGLVISDPQVLAECWAEAGLP
PEAMEQAKSPEIKAALFAQGERAAALDLFGAPSFVVGEEVFWGDDRLDQALALAAQS
>gi|56695301|ref|YP_165649.1| universal stress family protein [Ruegeria pomeroyi DSS-3]
MWRTEMRKFLVVLDDSRECLNAMRFAAMRAAHTGGGVAILSIIPPDEFNHWIGVGEVMREEARERIHAHF
EVFAKWMRDKQGVEPELVIREGEAVPEIIAHVQEDPEIGVLVLGAGTDKKGPGPLVSQLSRSSGSLPIPI
TIVPGDLSKEKLEAIT
>gi|56695302|ref|YP_165650.1| hypothetical protein SPO0387 [Ruegeria pomeroyi DSS-3]
MIAQIGDPRRDLLTLAVGALGALIATLVHMPMALLAGPAVAVSLAGLCGLSLHISPRLRDAGFLVIGLSI
GSLVGPESIEAMMRWPVAFGLLAGLTLATPWAGRWLIPRLLPIDRDEAFLAAAPGHLSLVIALADSLQLS
LTRPVVLASIRLMALTLLVPLAASLAGIEIGPGLPQLAAVTPWAWILGQIVAALLLAPVLKALKLPAHVL
IAGIVVAATTHLAGWTAGGLPGWAAQASLILMGAMIGSRFGGMGWRELRQSLTAGLAIVVLTTGLATLAA
LPAAYLSGLPLLDVLLGFSPGGLETMIILSAALGADPSFVAAAHLFRLSVLAVVLTLYATDVARRGQGKS
DGQR
>gi|56695303|ref|YP_165651.1| aminotransferase [Ruegeria pomeroyi DSS-3]
MATGSNIRTYFQGSWHEGDAPIIRAADHGAWLGSGVFDGARYFDGMAPDLEAHCARVNRSAEALMLTPTV
STQDMVEIVREGLKAYGPDQAVYIRPMYWGIDGDPTAIIPQADSTGFAVCLEEIPMAPATASATLTTTRF
RRPVLEDAVVNAKAGCLYPNNARMLREARSKGFTNALVADALGNVAETATANIFMVKDGEVFTPIANGTF
LAGITRARHIKNLRADGVPVHETVLSFADFHAADEVFMSGNMSKVTPVTALDDTQYQIGPIARRARALYW
DWAKSTA
>gi|56695304|ref|YP_165652.1| AsnC family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MDQIDHRIVRALQRDGRMTISDLADKVGLSPTPCARRLERLQRDGVITGYSARVDPAKLGLGVSVFVSVE
LERQERAAVDAFERAIRTCDEVMECYLMTGSRDILLRVLVADLAAFDAFLENRLMQIPGIRNLRSNFALR
TMVQRDSLPAIRR
>gi|56695305|ref|YP_165653.1| glutamate/leucine/phenylalanine/valine dehydrogenase family protein [Ruegeria pomeroyi DSS-3]
MQITPVAAPEHEQVVRIADPESGLLGFIAIHSTRRGPAAGGVRMRPYAQEADALNDALRLSRGMTYKNAA
AGLDLGGGKAVIMADPATQKTPDLLAAFGSAVETLAGRYWTAEDMGMTPADMARIGTRTTCVAGLADGDF
ASGDPSPITARGIFYAIRTAAKHRLGSVDLTGRTVAVQGLGHVGHYLCGYLHQAGANLIVTDIDRAQVAR
VAERYGATAVAPDAIYGVEADIFAPCAIGAILNAETIPQLKVRVVAGGANNQLATPEDATRLHDLGILYA
PDYVANGGGIINVATEILKISGREAWVASRLAALDDTMDRILTRARILSVSPAEVADATVDEILQAKAA
>gi|56695306|ref|YP_165654.1| biphenyl-2,3-diol 1,2-dioxygenase III [Ruegeria pomeroyi DSS-3]
MTYSAPAGTCVGHVHLKVSDLDRAIAFYRDVLGFEVQQRYGDAAAFLGAGGYHHHIGLNTWHSRGGPQPP
ARATGLYHSAFLYPDRKALGTVLRQVIEAGIPIDGSADHGVSEAVYLRDPDGNGVELYRDRAPEDWPRDG
EGNLAMTNAPLDIPALLAEAG
>gi|56695307|ref|YP_165655.1| tryptophanyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
MTETQFTPRVFSGIQPSGNLHLGNYLGALKRFVDMQGPEMETVYCMVDLHAITVWQDPKELAHSTRELCA
GFIAAGIDPEQSILFNQSQVPEHAQLAWIFNCVARMGWMQRMTQWKDKAGKNQQNASLGLFAYPSLMAAD
ILIYHATHVPVGEDQKQHLELTRDIAIKFNNDFGVDFFPVTEPVIEGAATRVMSLRDGTKKMSKSDPSDM
SRINMTDDADAIAQKIRKAKTDPDALPSEIDGLEGRPDARNLINIYAALADRSVEQVLADVGGKQFGEFK
PMLAELAVAKLSPISSEMARLMNDQAEIDRILARGAERARAITAPILKRTYEIVGMVS
>gi|56695308|ref|YP_165656.1| rhomboid family protein [Ruegeria pomeroyi DSS-3]
MPENTRGVNWVSVMMGNSRLENSVPVAYPWGKGTSTAAKGPPMSSDNDTSPVNPLPPVVVALVLFIMGIE
ITFSLGARGIVGGPQAVGWRLAAMQSYAFSPDILTWMWETGRWPVEHVIRLVSYPFVSVSFTQSLFVCVF
VLAMGKMVAESFGSLAMLVVFLVSGIGGALGYALLTGSPVALIGGFPPVYGLIGAFTWLLWRKLSLVGQH
QARAFSLIAFLMGAQLLFGLLFGGGLDWVADLAGFATGFALSFLLSPGGWARMRGRIRHD
>gi|56695309|ref|YP_165657.1| hypothetical protein SPO0394 [Ruegeria pomeroyi DSS-3]
MTRNEGTLDRAARIILGLVLLSLTVIGPKTMWGLVGLIPLLTGLVGSCPLYTILGLNTCPLKK
>gi|56695310|ref|YP_165658.1| cyclic nucleotide-binding protein [Ruegeria pomeroyi DSS-3]
MSALDCPAGTVLFRAGQDCPGFLRLDEGSIRVTLTAANGREVVLYRVRPGDVCLQTFACLTEGRSYSAEG
VAETRVRGHLMSHADFRTALARDEAFRTEVMQAVARRFADFEHLVEDVALTGFDTRLARVLLRLAKGDTV
AATHEALAAETASGRAFVSRRLAEFARQGLVELARGRVTLCDRSGLERIAAEER
>gi|56695311|ref|YP_165659.1| integral membrane protein MviN [Ruegeria pomeroyi DSS-3]
MKPIRLMAGFFTVGFWTLASRILGFAREILLAAYIGPGPVMDAFVAAFRLPNLFRRFFAEGAFNAAFVPM
FSKRLEGGEDAEGFAQQAFNLLGAAVLTLVALAMIFMPALIWATASGFVGDERFDLAVGYGKIAFPYILF
MSLAALFSGVLNATGRFAAAAAAPVLLNVFACAAMLAGSALGGEVIDWLIWVIPVAGVAQLALVWVAAER
AGIRLRPGLPRLSPAMRRLVRVAFPAALAMGVTQINLVVGQLVASRTESAVSWLFTADRLYQLPLGVVGI
AVGIVLLPDLSRRLRAGDDTGAREAYSRAGEFSLILTLPSAMALMAIPLPLVAVLFQRGAFTPEDSAATA
IAVAIYGLGLPAFMLQKVFQPLFFAREDTKSPFRYAVVAMVINAVLAFALYPLLGWIAPAIATTVAGWTM
VAQLALGARRMGEVARFDTRFHGRAWRILMASLIMGAALYAVLIPLGWVFDLPSWRYLGLLALILFAAVV
YFGVGHLIGAFRLSEFRRALRRS
>gi|56695312|ref|YP_165660.1| PII uridylyl-transferase [Ruegeria pomeroyi DSS-3]
MFDTPAVFARITEAAAEAADNAALRGAVVAILRDVQNAGRAAIAEGFAEDPFAARPLTRAYTYLTDGMVK
TAMYVASEILHPLATPTQGERIAVLAVGGFGRGEMAPFSDVDLLFLTPYKITAWAESVIESMLYILWDLR
LKVGHSSRTVKDCIRLGRDDFTIRTAMLEHRFLAGHAPLARSLDQRLKSELYKDTQREFIEAKLEERDAR
HRKQGERYMVEPNVKEGKGGLRDLQSLYWIAKYIYEVKETAELVPLGLFTPSEYRTFVQAEEFLWAVRAH
LHLVTGRATEQLTFDLQVEVAARMGYQDRAGRRGVEVFMQKYFREATRVGELTRIFLTKLEAAHMKGAPL
LERIFRRRRRIKQGYKVVRGRLDVVDPEAFLADKLNLLRIFEEALRTGMLIHPDAMRLVTANLDLIDDGM
RNDKEARRIFLDLLLKHGNPERALRRMNELGVLSAFVPEFEPIVAMMQFNMYHSYTVDEHTIQTIVNLAQ
IEKGELVESLPLASSILKAGVNRKVLYVALLLHDIGKGRPEDHSILGARIARKVAPRLGLSKADCETVEW
LVRYHLLMSDMAQKRDISDPRTVRDFAKAVQTTKRLDLLTVLTVCDIRGVGPNTWNNWKATLLRALHAET
KRALEMGMEALNREGRGNEAKKALRTALSDWPAGEVKTEIARHYPPYWQGFNVETHVTFAEMLRQLEHSG
DPGGIEIRLDPDEDRDATRACFAMADHPGIFSRMAGALALVGANVVDARSYTTKDGYVTDAFWIQDAEGH
PYEAARLPRLSQMILKTLKGEVVARDALKSRDKIKKREKAFNVPTHITFDNEGSDIYTIIEVDTRDRPGL
LYDLARALAAANVYIANAVIATYGEQVVDSFYVKDMFGLKYHSEAKQRTLETKLRKAITEGAERAAAS
>gi|56695313|ref|YP_165661.1| hypothetical protein SPO0398 [Ruegeria pomeroyi DSS-3]
MFAVFNPARKIALSAMALAAAALLSACEPVAIGGGGPSINTSKPVPVALLVPRGSAQSGDAVLAQSLENA
ARMAIADLQNVQIDLRVYDTAGDAGTAAAVAKQAVGEGAKIILGPVYAQAANAAGLAVLNQNVNVLSFSN
NVNIAGGNVFVLGPTFNNSADRLVSFAARQGKGNIVVVHSTDEAGQLGRAAISDAISRSSAKLAGTVAYE
RSQQGVINSVPQVKATVDGTGADSVFFTSTTAGALPLYTQLLPEAGVSPAQTQFIGLTRWDIPAQTLELP
GVQGGWFALPDPSKAAAFRARYQSTYGGAPHPIGGLAYDGIAAIGALVGAGKSDALTGAALTQSAGFQGV
GGIFRLRPDGTNERGLAIATIQNKQVVVIDPAPQSFSGAGF
>gi|56695314|ref|YP_165662.1| tetrapyrrole methylase family protein [Ruegeria pomeroyi DSS-3]
MNYQKLRLPAGLYFVGTPIGSARDITLRALDVLASAEVIAAEDTRSLRHLLDIHGVPLDGRRVLAYHDHS
GAGAQARLLEALAEGKSVAYASEAGMPLIADPGFELSRAAAEAGHMVTCAPGPSAVLTALTLAGLPTDAF
FFAGFLPNAAAARKTRLETLRGVPGTLVFYESPKRLAASLRDMAEVLGGERPAALCRELTKKFEETRRDT
LAGLAEALAEAPVKGEVVLLVDRARSGPVKDSDIEQDLLAALETHSVRDAADLVARMHDVPRRPVYQLAL
KLGKG
>gi|56695315|ref|YP_165663.1| hypothetical protein SPO0400 [Ruegeria pomeroyi DSS-3]
MKALASRGTRNHLAGEAAENSVLRDYERRGYHLVRRRWRGRCGEIDLIARSGDEVVFVEVKQSRDFARAA
ESLGARQMKRLHAAAAEFLAEEPDGQLTPMRFDVALVDGTGRLEIVENAFGHG
>gi|56695316|ref|YP_165664.1| glutathione synthetase [Ruegeria pomeroyi DSS-3]
MKIAFQMDPIGAVNINADSSFRLAEEAQARGHELFYYGPDQLAYQEGRITARGHDMTVQRVAGDPAVLGP
LREVDLAEFDVVWLRQDPPFDMHYITSTHLLDRLKGQTLVVNDPFWVRNYPEKLLVLNFPELTPPTTIAR
DLDTIRAFKARHGDIILKPLYGNGGAGVFRLDENDRNLSSLHELFVGFSREPLIVQKYLPDVRKGDKRVI
LVDGEAVGAINRVPAEGEVRSNMHVGGRPEKIGLTDRDREICTAIGPLLREKGQIFVGIDVIGDYLTEIN
VTSPTGIQELERFDGGNIAGRIWEAIEAKL
>gi|56695317|ref|YP_165665.1| competence protein ComM [Ruegeria pomeroyi DSS-3]
MVARAHTVAFQGVEARPVEVQCAVTPGLPAFSIVGLPDKAVSEARDRVRSALSGMAIALPSKRITINLSP
ADLPKEGSHFDLPIALALLAALEIVPADAAEATLALGELSLDGSLVPVVGALPAAMTAAAEDWLLLCPEA
SSAEAAWVDAAKVIGATSLSAVVRHFTGQAPIDAARPGEVSAAAFERDLREVKGQERAKRALEIAAAGRH
HMIMIGTPGSGKSMLAARIPGILPPLTPVEALETSMIHSLCGLLDQGGISRTRPFREPHHTASMAAIVGG
GKGAKPGEISLAHNGVLFMDEFPEFPRTVLETLRQPIETGEVMVARANAHVKYPCRFMLVAAANPCRCGY
LSDPARACARVPVCGEDYLGRISGPLMDRFDLRIEVPPVAFTDLDLPPSAEGSAEVAARVAAARAVQTAR
FGGHPTLRQNADAEGKALEEIATPDAEGRDLLLTAADRFGLSARAYHRILRVARTIADLAGEPDIRRPHI
AEALSFRVSAKALN
>gi|56695318|ref|YP_165666.1| hypothetical protein SPO0403 [Ruegeria pomeroyi DSS-3]
MPLMTYDLYIGDRSFSSWSLRGWLMLEKFGIPYRSHLVGLYSGTMAADLAPVAPARQVPALRTPDGIALG
QSLAMAETLAERHPEAGLWPADPAARATARWLCAEMVSSFTALRGECPMQLLHCYEGFQPGAGTLADLAR
IETLWSHARAVSGAATGPLFGTYSLADVFYVPVAARIIGYGLPVSAAARDYCLFLLGDTAVRQWRAMGLT
VRYDPMPYGLDLPVRDWPVGTPGAARAVEAGPSVNTACPYSGDPVSDFLELDGRVWGFCNAFCRDKTVAD
PGAWPKFTAMVAKG
>gi|56695319|ref|YP_165667.1| phosphoglycerate mutase family protein [Ruegeria pomeroyi DSS-3]
MTRLHLVRHGPTHAKSMVGWSDLPADLSDTGFLTRLAAHLPPQALVVSSDLRRAADTASAIQGDRTRLPH
RAALREIHFGAWELRRFAEIEAEDPEHIRAYWETPGDVRPPGGESWNEVCARVDAEIDALIAAHPGADLI
VVGHFGMILTQVQRALRLEADQAFAHRIDNLSVTEITRLPQGWEVGRINHLV
>gi|56695320|ref|YP_165668.1| cobinamide kinase/cobinamide phosphate guanyltransferase [Ruegeria pomeroyi DSS-3]
MLYPKFTLVLGGAASGKSSFAEQMVVSTGKSRVYFASSQVFDAEMQAKIDRHLVQRGPGWTTIEEPLEPG
PALSALSARDICLFDCATMWLSNHLLAEGDLDAAQERLMAAIRHCPAQLVMVSNEVGHGIVPENALARRF
REAQGRLNIALAAEADLVVLVVAGLPLALKGQLP
>gi|56695321|ref|YP_165669.1| RNA polymerase factor sigma-32 [Ruegeria pomeroyi DSS-3]
MALNDPQDKRMSRQAMKAELLDAETELALAYAWRDHRDEAALHRLITAYMRLAISMAAKFKRYGAPMNDL
IQEAGLGLMKAADKFDPDRGVRFSTYAVWWIKASIQDYVMRNWSMVRTGSTSSQKSLFFNMRRVQARLER
EAATDGLALDRHQLHQMIASEIGVPLRDVEMMEGRLSGSDFSLNATQASDEEGREWIEALEDESEQAAEL
VAHRHDTEQLRDWLIEAMQALNERERFIVRERKLRDEPRTLESLGDELGLSKERVRQLEAAAFAKMRKSL
EARSREVQHFLV
>gi|56695322|ref|YP_165670.1| hypothetical protein SPO0407 [Ruegeria pomeroyi DSS-3]
MKQFFAAGLALALCLIAPLRAASAGELIPEDILAAMRQADVVILGETHDNPRHHLVQAEAIAALQPGAVV
WEMLTEEGAQRLRRKAVNDPAELERILQWAELGWPPLAMYLPVFEAADAPVYGALVPRAAARAAMETGAA
AAMGADAARFGLTVPLAEADQAAREADQQAAHCNAMPPEMLPQLVAIQRLRDAVLARAILRAQDETGGPV
AVITGNGHARADRGIPVFLSRISPGLRVYVLGQSEGGLIEGRFDAVIDSPAAPREDPCAAFDKS
>gi|56695323|ref|YP_165671.1| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase [Ruegeria pomeroyi DSS-3]
MLASKRILLIIGGGIAAYKTLDLIRRLRERGAAVTPVLTGAAEEFVTPLSVSALAGEKVYRALFDLTDEA
EMGHIQLSRSADLVVVAPATADLMGKMAAGLANDLASTLLMATDTPVLIAPAMNVRMWQHPATRRNHAQL
AADGIRFIGPNEGDMACGEYGPGRMSEPLEIVAAIEAALGDGPLKGKRVLVTSGPTHEPIDPVRYIANRS
SGAQGTAVARALAALGAEVVFVTGPADVPPPDGVEVVRVQSAREMDAAVDAALPVDAGVFAAAVADWRVA
SASDRKLKKSRDGLPVLEFAENPDILKRVSRMEAGRPPLVVGFAAETNDVIENATAKRLRKGCDWIVAND
VSPATGIMGGSENAVILITGEGAEEWPRMSKEAVADRLARRIAETLVG
>gi|56695324|ref|YP_165672.1| deoxyuridine 5'-triphosphate nucleotidohydrolase [Ruegeria pomeroyi DSS-3]
MVAIRVIRDAGADTQVPLPSYETTGAAGADIRANLPDRGSLTLAPGGRALIPTGLRVEIPAGYEIQIRPR
SGLALKHGITLPNTPGTIDSDYRGPLGVILLNAGAEPFEVVHGERIAQLVVAPVVQARFELTEALGETER
GAGGFGSTGRG
>gi|56695325|ref|YP_165673.1| molybdopterin biosynthesis protein MoeB, putative [Ruegeria pomeroyi DSS-3]
MLLVLALAAGLWTMGHVMGVSRRARLVMLCALFAVVLMLQFALPVSHPLRAATGGSPALWLLIGGFALLA
FGYGSGVAWLKARAQGRPAETTAKPGSFTETELDRYARHIVLRELGGPGQKRLKQARVLVIGAGGLGAPA
LQYLAAAGVGTIGVIDDDVVENANLQRQVIHRDADIGKPKVFSAEAAMLAQNPAIAVRPYHRRLTEEIAA
DLFADYDLILDGTDNFTTRYLANQVAVAQGKPLISGALSQWEGQLSVFHPAGDTPCYQCIFPEAPAPGLA
PSCAEAGVIGPLPGVVGAMMAVEAIKLITDAGAPLKGEMLIYDALYGESRKIRLSRRADCPICGQG
>gi|56695326|ref|YP_165674.1| hypothetical protein SPO0411 [Ruegeria pomeroyi DSS-3]
MAKAARFGSAAGPIARFAARGDPARGRRREMSTETFHAELANYLGVGDLRSDYPDGGWSWNRHRLTLGRY
RVELTQDRQIVAQRPRGGGLIPSTQLAISGVRSFAEGERVSDDLCRLLSLAAQSQVVPLSYRFGGRGRQP
LHPMGQAIYLRPLLPIRDGAAMRTYLETVWPPCYPAQRDRAFRPVPSPYESLRDHHDRRKEILHEYLLRL
LDYRGRMLLYRHAARVGKDIG
>gi|56695327|ref|YP_165675.1| hypothetical protein SPO0412 [Ruegeria pomeroyi DSS-3]
MTGREEMAKTETTKITPASFTEVLKSMQGPVSMTSLVKPQLEQFWDAQEKLLAESERFTRHWFERRHEAI
RTALDAARSATAADPANPAQAMETVMDWQRHSVERLVEDAREWFDTVSRCADYVSKTEAEAVGETLNEAQ
DLARKATKSAKSEPV
>gi|56695328|ref|YP_165676.1| Cys/Met metabolism PLP-dependent enzyme family protein [Ruegeria pomeroyi DSS-3]
MTKTNRPAGPMTTAIHAGEAPDPATLASAPPIHMSSTYVSEDVLGFSAHDLTPQSPYAYSRWANPTVAML
EAKIAAMQGTEACLCTASGMAAAAAIFFTFLSAGDHVIVSDVSYAGVAELARDTLPRMGIAVSTVDMSDL
AAVAAAIRPETRLIHTETPVNPIGRLTDLAAISALARQAGALLSCDATFASPLGMDTVALGVDLTMHSVT
KYICGHGDAVAGAVCGRADLVSRMRVEAAIHHGGVLSPFNAWLIARGAATLPLRMKAHAAGAHAVAEWLE
ADPRVGRVIYPGLPSHPQAELAARQMSNMSAMISFQVGDAATGERLARQMIERLEVIHYAVSLGHHRSLI
FWMGTEGLMETSFRLEGAQLEAYRAYAGDGIFRLSVGLEDPEDLIADLDRAIA
>gi|56695329|ref|YP_165677.1| peptidyl-dipeptidase, putative [Ruegeria pomeroyi DSS-3]
MTNPILADWQTPFDIAPFDRIADSDFAPALEVALAEHRAEIAAIADSPEAPTFANVIEALEAAGGALDRV
LGVFFTVAGADSNPAREELQRAFSPQLAAHFSEISANKALFARVAAVWEARADLELSDEQQRVLMLTHRG
FVRAGAALSGEAEARMKEIKARLAVLGTEFTQNLLADERDWFMDLSEDDLEGLPDFVTAAARAAGQEKEA
AGPVVTLSRSLIVPFLQFSPRRDLRERAYRAWVARGANGGKTDNRAIATETLTLRQERAALLGYDSFAAY
KLETEMARSPDRVRDLLMQVWAPARARAEADAEVLTAMMQEDGINGPLEPWDWHYYAARRRKAEHDLDEA
ALKPYLQLDRMIEASFACANRLFGLEFRPLDIALYHPDCRAWEVTRDGRHVAVFIGDYFARGSKRSGAWC
SAMRAQAKFPRTQAPVVINVCNFAKGDPALLSYDDARTLFHEFGHALHQMLSDVTYESVSGTSVARDFVE
LPSQLYEHWLEVPEVLAEFATHAETGAPMPAEMLEKVLGAANFDQGFQTVEYVASALVDLAFHDGPAPSD
PMAKQAEVLAELGMPHAIGMRHATPHFAHVFAGDGYSSGYYSYMWSEVMDADAFAAFEEAGGAFDPDRAE
ALERHILSTGGSRDAEDLYLAFRGRLPGVEALLKGRGLIAA
>gi|56695330|ref|YP_165678.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein [Ruegeria pomeroyi DSS-3]
MKGSLMPANVLFSARSELWPVYQPLISTYLREMGIDFDLRRDFPPEEVDYVVYAPNGGLRDFTPFTRLKA
VLSLWAGVESIADNPTLTVPLARMVDHGLTQGMTEWVVGHVLRYHLGMDAHIHGLNGDWRQDVPPLASQR
QVTILGLGALGEAAARALSALGFQVTGWSRSPKELPGIACLHGPDGLDQALARAEILVLLLPSTAATENT
LNTQTLARLPRGARIINPGRGPLIDDDALLAALDSGQVGHATLDVFRIEPLPRDHPYWGHPNVTVTPHIA
SETRPETAAQVICENIRRGESGEMFLHLVDRSLGY
>gi|56695331|ref|YP_165679.1| rod shape-determining protein MreD [Ruegeria pomeroyi DSS-3]
MSYLEYTVKSTPSGLRKILYMNWPLTLLLISVASAGFLMLYSVAGGSFSPWAEPQIKRFMAGLVVMTAVA
MVPIWFWRNMAAVAYGGSLVLLVMVELFGAVGMGAQRWIDLGFMRLQPSELTKITLVMVLAAYYDWLPGK
KTSRPLWVLVPVLIILVPTALVLKQPDLGTAILLLSAGGALMFLAGVHWAYFAAVIAAGVGLITAVFKSR
GTDWQLLKDYQFRRIDTFLDPSSDPLGAGYHITQSKIALGSGGWSGRGFMQGTQSRLNFLPEKHTDFIFT
TLAEEFGFIGGISLLSLYALIIAFCVATALATRDRFSSLVTLGIAVNFFLFFAVNMSMVMGLAPVVGVPL
PMVSYGGSAMLVLLVAFGLVHSAHIHRPR
>gi|56695332|ref|YP_165680.1| penicillin-binding protein 2 [Ruegeria pomeroyi DSS-3]
MRRSARDMDKVQRVLTRRTLLLGGIQAAFIGGLAMRMRYMQVDQADQFRLLAEENRINIRLIPPSRGELF
DRNGAIIAQNTPSYRIVMVREDAGDVDAVVANLQRLIPLDPEELDRALAEMRRSPPFLPVTLADQISWEH
ISKVAVNAPALPGITPEVGLTRVYPQASDFAHVVGYVGPVSDYDLSQIQDPEPVLRIPRFQIGKVGLEAK
QEDLLRGKAGAKRVEVNANGRVMRELDRREGKPGADLQLTVDSALQSYVQARLGQESAAAVVIDCETGDL
RAIASAPSFDPNLFVRGISVADYRGLTEDPYRPLANKSVQGAYPPGSTFKMITAMAALEAGITNPEETVY
CPGFLEVSNRRFHCWKRGGHGHMNLEESLEQSCDVYYYDVALKVGIDRISAMAEEFGLGVRHDIPMSAVA
RGLAPNRDWKARVHGQDWLVGDTANASIGQGFMLASPLQLAVMTARIATGRKVAPRLVKSIDGVEQPSGA
GEPLAVNQANLRRLRKGMYAVSNNRRGTAYRSRILADDNRMAGKTGTSQVRNITAAERAAGVIRNEDLPW
ERRDHALFVCFAPFDNPRFAVSVVVEHGGGGSTAAAPIARDILLQALYDGFPPLESYPAKDRSRIEAQQE
RLRRELRPVTRPEDKDRA
>gi|56695333|ref|YP_165681.1| hypothetical protein SPO0418 [Ruegeria pomeroyi DSS-3]
MDSLAPSRIWVMRLSYAGLAMVILFFHLLPLDTLPKRWASPDLLLALTLAWSLRRPDFVPPLLIAIVILL
ADLLLQRPPGLLAALTVAGTVFLHSRFGNHGETGFVAEWLAVAVVLMAIALLYRIVLAITSVDQAPLFLV
ASQLVLTILIYPLVAGASQAVFGVRHLTPADAETLGAR
>gi|56695334|ref|YP_165682.1| rod shape-determining protein MreC [Ruegeria pomeroyi DSS-3]
MAERTSLARDRSQREDYAGPLRRLLLGVLLLCLLGIFLVWRIDSPRVERFRAQVVDTVIPSMDWAMVPVT
GTINLIRDFQSYQRLSEQNRELRSELRQMRAWKEAALQLEQENARLLDLNNVRLDPRLTYITGVVMADSG
SPFRQSVLLNVGARDGIVDGWAAMDGIGLVGRISGVGQSSARVILLTDAASSIPATIQPSGQTALITGDN
TAAPVVDFLENRELVRPGDRVVTSGDGGVFPAGLLIGQVAEDRTGRLRVRLSADYERLEFLRVLRHHGTE
KIEDHGDVVGPPAPAAPDTSALTTPAEATDG
>gi|56695335|ref|YP_165683.1| rod shape-determining protein MreB [Ruegeria pomeroyi DSS-3]
MGFFDNLSGLFAADMAIDLGTANTLVYVKGRGIILSEPSVVAYHVKDGVKKVLAVGEDAKLMLGRTPGSI
EAIRPMREGVIADFDTAEEMIKHFIRKVHKRSTFSKPKIIVCVPHGATPVEKRAIRQSVLSAGARRAGLI
AEPIAAAIGAGMPITDPTGNMVVDIGGGTTEVAVLSLGDIVYARSVRVGGDRMDEAIISYLRRQQNLLVG
ESTAERIKTSIGTARMPDDGRGQSMLIRGRDLLNGVPKEIEISQAQVAEALAEPVQQICEAVMTALETTP
PDLAADIVDRGVMLTGGGALLGDLDLALREQTGLAVSIADESLNCVALGTGKALEYEKQLRHAIDYDS
>gi|56695336|ref|YP_165684.1| hypothetical protein SPO0421 [Ruegeria pomeroyi DSS-3]
MLSYQHIYHAGNLADVQKHALLALALDYLTRKDKPLSYLETHAGRGLYHLDAAEAVRTGEAGAGIGRAEG
AAWFDPAHPMTRVLAAVRTDHGAMAYPGSPLVAAHLLRPGDMMHLAELHPQEHAALEQAMAGYPARVYRR
DGVEMAQSLLPPEPRRGMMLIDPSYEVKSDYDRIPAVIAQLHRKWNVGVIALWYPILTDERHKVMLAALE
RLDLPRVLRHEVRFAPAREGHRMVGSGMFVINAPFGLADEAARLSGLFAQL
>gi|56695337|ref|YP_165685.1| 2-isopropylmalate synthase [Ruegeria pomeroyi DSS-3]
MTHVTDQDRVLIFDTTLRDGEQSPGATMTHTEKLEIAEMLDEMGVDIIEAGFPIASEGDFKAVSEIAKRA
QNSRICGLARANFADIDRCWEAVKHAEKNRIHTFIGTSPLHRAIPNLTQDEMAEKIHETVSHARNLCDNV
QWSPMDATRTEWDYLCRVIEIAIKAGATTINIPDTVGYTAPAESADLIRRLIETVPGADDVIFATHCHND
LGMATANSLAAVAGGARQIECTINGLGERAGNTALEEVVMAMKTRHDIMPWRTGIDTTKIMAISRRVATV
SGFNVQFNKAIVGKNAFAHESGIHQDGMLKNRENFEIMRPEDIGLSGTSLPLGKHSGRAALRDKLEHLGY
EVGDNQLKDIFVRFKELADRKKEVFDDDVIALMRSGENAEQDHLQLVSMKVICGTGGPAEATVEMEIDGK
DVSATAHGDGPVDASFKAIRALHPNEAHLQLYQVHAVTEGTDAQATVSVRLEEDGMIATGESANTDTVVA
SAKAYINALNRLIVRREKAGPGADAREISYKDLT
>gi|56695338|ref|YP_165686.1| DNA-binding protein, putative [Ruegeria pomeroyi DSS-3]
MSETAPRQTTPIIGTRMRELRKARGLTLKQLAAATGLSIGYLSQLERQAADPSVRALNVISTALGVGINW
FFPDPDTVSDPEADLVVRADRRRTLRFSSGVRDELISPNLSGQLELIVTTFDPGAGSGAELYAHRGEEAG
FIVEGQLEVTVGARLVTLGVGDTVQFASTIPHRYHNPGPGRTVMIWAVTPPYY
>gi|56695339|ref|YP_165687.1| membrane protein [Ruegeria pomeroyi DSS-3]
MRNSSFLRAYGFWHWGEGLQTVLFTWYMAFHVGLPASQIGFYQALVLSPFLLFTIAGGILTDRIGARRSF
RAATVLFGLLLIGYGVLDHVFGFVPVLFFAYCLAAGVVSAVSNPAIDTFIPDATPRRAQENALLAANAHN
MAKLAGNLTGLTLPLLHAVGGFGVNGLLMLASAASLRPVQPATRQGAPEPELSERPSLRRLWAHFRECPE
NFDILLSSAMLGLLVVPVGYILLPLALRANFPGYGDLLAVMTVSSWLGAIAATWAIGRLSRRIGHPGRIA
LLVWGGYACALVTLPLVPGFAWLCVLVAVLGMVKLGKAMVYGKYIRNCPDTLRGSVIAVEQTAFWGLATL
GTFLLGWLVDLIGLVPTIHLVALSVGLAALALALRGRLSGLTPAL
>gi|56695340|ref|YP_165688.1| MORN repeat-containing protein [Ruegeria pomeroyi DSS-3]
MTRNRRRIAFAAILAMATTAHAQQGQVLTTQDEIGGVYEGTFRGGLQHGTGTYRLPNGYEYSGEWVDGEI
RGRGVARFPNGSVYEGSFAQGKPEGMGKITFSDGGTYEGEWSNGVINGQGVAVYANGVRYEGGFRDARHH
GKGVMQSPGGYVYEGDWADGQKEGLGKITYPDGAVYEGGIVAGQRHGEGTLTLPDGLVYVGFWADGQING
KGTLTQANGDVYEGDLIAGRREGKGKVTYANGDVYQGDFTDDRREGQGIFTGTDGYSYAGSWVAGQIEGQ
GRVTYPDGSVYEGNFRADLADGQGKITYPDGSSYEGEWVAGVIEGTGTAIYANGIVYKGTFKNAKNHGQG
VMTYADGYRYEGEWQDGVRHGQGKATYPDGSVYTGQYVNGQREGDGEIVMADGFRYKGQWQSGKISGIGV
ATYANGDIYEGHFRNGKRQGEGTMKYASGQEEKGNWDNGALTKGAAASDG
>gi|56695341|ref|YP_165689.1| NAD synthetase [Ruegeria pomeroyi DSS-3]
MADRFRITLAQLNPTVGDLAGNAAKARMAWEHGREAGADLVALPEMFVTGYNTQDLVLKPVFHDAAIAMI
EALAEECADGPALAIGGPLVEEGKLYNAYLILKGGKIVSRSLKTHLPNETVFDEVRIFDAGPLGGPYSVG
NTRIGSPICEDAWHEDVAETLAETGAEFLLVPNGSPYYRDKYDMRINQMVARVVETGLPLIYLNMVGGQD
DQVFDGGTFGLNPGGALAFRMPVFDEAITHVDLERGSEGWQIVQGEVAPLPDAWEQDYRVMVESLRDYMR
KTGFAKVLLGLSGGVDSALVAAIATDALGPENVRCVMLPSEYTSRSSLDDAEAVAQALGVRYDYVPISES
RAAVTNTLAPLFAGTEPGLTEENIQSRLRGLLLMALSNKFGEMLLTTGNKSEVAVGYATIYGDMAGGYNP
IKDLYKTRVFETCRWRNANHRLWMMGPAGEVIRPSVIDKPPSAELREDQKDSDSLPDYPELDAILDILVD
QDGSIADCVAAGFDRDVARRVEHLIYISEYKRYQAAPGARLTPRAFWLDRRYPIVNRWRDPS
>gi|56695342|ref|YP_165690.1| hypothetical protein SPO0427 [Ruegeria pomeroyi DSS-3]
MPRSTGASRGRKLLVSGMCAMFNPLNAPPQGVEMLKSPPREIDEAEIDQFVQAVMRQEAAAPKPRKTLPE
IAPAVPEAAASEESEERKPRYQPKWRHSAAILALALLIGWPGLLVALLGLAVVVPVIAYLTLGHDRASEC
VAAAFARFRRLDPVRAEILRGWAMRRVAGVERVLSWLPERWTSGLYLPDLRDTPVSHDKMRLDPFSRFQA
EQAETPDAG
>gi|56695343|ref|YP_165691.1| amino acid deaminase, putative [Ruegeria pomeroyi DSS-3]
MPGPRPTDFYSDLALPKQVEVVVVGGGIIGVSAALELAERGVSVLLCEKGQIGAEQSSRNWGWVRLGMRD
PREIPLMQAALEIWDGLDDRLGRSTGFVRSGILFAASGRRSVGNLERWARHVDGLETRARMIEGAELAAH
LPGHSKLPRAALFMPQDGRAEPQWAAPAVAEGARDRGAQILTACAVRSVDVEAGQVTGVYTERGRVACSR
VILAGGAWSRLFAGNAGVSLPQLKVLNTVLRSSPTVEGPNAAYWSDGFAMRRRADGGFTIAAGTQNTVDL
VPDSLRLAHRFLPAFRQEWRSLRFRLSRRWLEEAQQARQWQPGDVTPFELTRILDPEPSQKHLRRAWNAA
RRAFPMLDGSEIMQSWAGMIDVTPDAIPVISDVPALPGLFIATGFSGHGFGIGPGAGRLVADLATGETPV
VDPWAFRLSRFSDGSRVAPDPGY
>gi|56695344|ref|YP_165692.1| metallo-beta-lactamase family protein [Ruegeria pomeroyi DSS-3]
MTLKLSRRAALTGAASLPLAAAAAPVLAGGHGGKAAAPIARSFKLGSMGVTTLLDGSLPRDGAKDIFGGG
ASDEDFARVSAENFIPADMAQFFFTPTLIDTGAELVLFDTGLGQGGITRALDAAGVAPEAIDVVVITHMH
PDHIGGMVTDGAPTFANARYVTGAAEYDFWSKAEAGNRVGDLVKSHVTPLAEKMTFVEPGASVAAGVTAV
DASGHTPGHMGYMLESDGQQLMLTADLANHYVWSFAHPEWEVRFDMDKAKATASRRAILGMLAADRVPMI
GYHMPFPAAGYVETRGEGFRFVPVGYQLMG
>gi|56695345|ref|YP_165693.1| glutamyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
MSMTTTRFAPSPTGYIHVGNLRTALMNYLIARKAGGTFILRIDDTDPERSKEEYVDAIKQDLDWLGLHWD
RVERQSERLDRYAEAADKLRAMGRFYEAFETPTELDLKRKKQLNMGKPPVYDRAALALSEGEKEALRAER
GNGVWRFKLDQERIEWTDGILGDISIDAASVSDPVLIRGDGQVLYTLASVVDDTDMGVTDVVRGSDHVTN
TATQIQIMAALGFEHPRFAHHSLLTGPQGEALSKRLGTLALRDLREQGVQPMALLSLMARLGSSDPVELR
SDMAELIEGFDVTRFGAAPTKFDVQDLFPLTGRYLQALPLEAVAKDVAAAGVPEDLAAPFWSMARENITT
LNDLAGWWALCRDGAEPLIADEDRAFVTEAMALLPEGPLDADSWGAWTQAVKEATGRKGKGLFMPLRKAV
TGMERGPEMATLLPLMQVIRARG
>gi|56695346|ref|YP_165694.1| hypothetical protein SPO0431 [Ruegeria pomeroyi DSS-3]
MADPYFFGYGSLVNLATHDFPDPRPARLFGWRRLWRHTDLRQVAFLTAIPDPECSIDGMIAHVPDDDWEA
LDAREWAYDRVAVSAHVRHDLKRPAEVAVYAVAPEKQSPPSTRHPILLSYIDVVVQGYLHAFGLEGVRDF
FATTSGWDAPILNDRKEPRYPRHQQLKAAETDLVDRSLNDIGADIITAG
>gi|56695347|ref|YP_165695.1| rrf2 family protein [Ruegeria pomeroyi DSS-3]
MRITKRTNIAVRLLMFCAAHPGRLVTKSEIAEVCNVSENHLAQVINQLSQLGFLTTQRGRNGGMCLGMAA
DAIRIGEVFRHVEGNLPMVECFADADNSCPLTDACRLRLALRDAAQAFYASLDEITLDALVCDNTDLLKI
LNPVVCAR
>gi|56695348|ref|YP_165696.1| ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MSLRLAARLARRELRGGLRGFRIFLACLALGVAAIAAVGSVRSAIEAGLSREGAALLGGDAQMGFTYRFA
TPEERDWMQARASRVSELVDFRSMAVVGAERALTQVKAVDGAYPLLGSVTLDPDLPLDQALAGAKGLPGG
VMEPVLSDRLGLQPGDRFRLGTQEFVLMARLMQVPDGVADGFALGPRTLVRTADLAQSGLLAPGTLFDTK
YRLDLPPDSDLASIAQDARGRFTDSGLRWTDARNGAPGIADFTRRLGAFLILVGLSGLAVGGIGVSAAVR
AYLADKTTTIATLRTLGADRRIVFQTYFLQIGALSGLGILLGLVLGGLAPLLLAPLIEAQLPVPAVFAIY
PEPLAEAAIYGLLTALVFTLWPLARTEEVRAATLLRDALSRAPLLPRLRYVLATGAGLALLCGLAAWFSG
ALALTLWTLGGIAGALLLLAIAASAVQALSRAAAPLARGRPALRWALASISSPRQGAAPVMLSLGLGLSV
LAAVGQIDGTLRNAISGNLPDVAPSYFFVDIQRDQMPGFTARLESDPGVSRVESAPMLRGIITRINDRPA
REVAGNHWVVRGDRGVTYSAELPDTTRLTEGAWWPQDYDGPPLISFAAEEGAEMGLQLGDTLTVNILGRD
ITARIASFREVDFSTAGMGFVMAMNPAALSGAPHSNIATVYAEPDAEAAILRDLASAYPNITAIRVRDAI
DRAAGLLAGLASATSYGAGVSLLTGFLVLIGAAAAGQGARIYEAAVLRTLGASRRRILLSLALRSALLGA
AAGTIALAAGILGGWAVSRFVFETSFTVIWPSAILIVLGGVLAVLGASLVFALPPLAARPARVLRARE
>gi|56695350|ref|YP_165697.1| ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MTDPALVLEDARLSLEGNAGKVDILRGISLNVPAGQTLGLVGPSGSGKSSLLMLMGGLERATGGRVQALG
HDLGAMDEDALARFRRDRMGVVFQSFHLIPTMTALENVATPLELAGHRDAFARAAAELEAVGLSHRAGHY
PAQLSGGEQQRVALARAAAPRPAILLADEPTGNLDEANGAAIMDLLFGLRDQYGATLVLVTHSARLASRC
DRVVRLRDGRIEDTESREAAQ
>gi|56695349|ref|YP_165698.1| acyl-CoA thioesterase, putative [Ruegeria pomeroyi DSS-3]
MRKALIGLLLAGWGMAATAEPVVIAALGDSLTQGYGLVPEQGFVPQLQRWLMAEGAEVTLINAGVSGDTT
AGGAARVAWTLTPEVDAMIVALGGNDLLRGIAPEVARGNLATILTEAQRAGVAVLLVGMQAPGNYGADYK
VAFDAIYPELAAEHSALLAPSFFAGLMAEGDPAAAAGLMQGDGIHPNAEGVARIVAALGPFVLDLVQAAE
K
>gi|56695351|ref|YP_165699.1| hypothetical protein SPO0436 [Ruegeria pomeroyi DSS-3]
MPGRFFLTRPLTELADWLGCALPDLGTQPPRRNIQPGQEVLVLTGQGLCPMRWGIVPVGRVNARGRPVME
TIINARSETVFDKSAFAGTGRAVIPVDGWYEWTGEKRRKTAWRISDAAGAPLLFAAITDVWTAPGGQQLH
QVAAVTCPPNADVAPIHHRMGVLLSREDVPVWLNGDQTQVQALMRPWPEGRLRIERATDVDWSAP
>gi|56695352|ref|YP_165700.1| cold shock family protein [Ruegeria pomeroyi DSS-3]
MATGTVKWFNTTKGFGFIAPEEGGKDVFVHISAVERSGLTGLADNQKVSYELKPGRDGRESAVDLKLL
>gi|56695353|ref|YP_165701.1| ErfK/YbiS/YcfS/YnhG family protein [Ruegeria pomeroyi DSS-3]
MITRRTFIAASAAAGTLPWAIQAKASDAFDPTPQVVRIKKQFEPGRLLILPRSFYLYYVTEEREAIRYGC
GVGKAGLEFTGTATIDVKKEWPTWRPTPEMIERDPRTYAKFVDNNYIQPGGPENPLGARALYLFQNGVDT
YFRIHGTTQPQTIGHAASNGCIRMLNEHVIDLYNRVPLGTVVTVL
>gi|56695354|ref|YP_165702.1| hypothetical protein SPO0439 [Ruegeria pomeroyi DSS-3]
MPTHNQTQIPSMTRVNHILIPGIVLLVSALLVQISGLTLLLGAHPWWAHKVIWMGLPIGIGLALIAGALR
VPRRLRQIGFTLLTLVAFLIATEGKTQFTASFAENTAAGRAWYFGWIATCALITATAASLFRYSHQTD
>gi|56695355|ref|YP_165703.1| thioesterase family protein [Ruegeria pomeroyi DSS-3]
MQKQGHPAMTDPQPSGELTLRTLAMPRDVNVNGDIFGGWVLSQMDIAAGLTAGARAGGRVTTVAVDAMKF
IRPVGVGDVLCIYCQVVRVGRSSMAIEIEAWALRDRQGLREKVTEAVFTFVAIDEEGRPRPVDAAAAG
>gi|56695356|ref|YP_165704.1| hypothetical protein SPO0441 [Ruegeria pomeroyi DSS-3]
MEIIMQILVGIAGLSLAVLIYAWAYGRAHDPAAPAWARGQLFASVASLVATSLAPIGAGYLTAGLLWPDG
LSLVWGLPVAIGAVPVVWVFSLRLLRRGRDRAQSPTGLARAMA
>gi|56695357|ref|YP_165705.1| thioredoxin [Ruegeria pomeroyi DSS-3]
MGDKTLTCLACGQLNRVPEARLTAGAKCGKCGDGLLTGQARDVDPAILEKAKKNDDLPLVVDFWAPWCGP
CRMMGPEYAKAAGVLAGQARLVKLDTQKHQSTGGRYGIRGIPTMVAFERGKEKKRQSGAMQSGQIVGWVR
G
>gi|56695358|ref|YP_165706.1| hypothetical protein SPO0443 [Ruegeria pomeroyi DSS-3]
MTGVEWMTLDRAVMMFAGFMVLLSVLLTALVSPLWMWFTVFIGVNLIQSSVTGFCPAAMVLKKLGFKTGT
AF
>gi|56695359|ref|YP_165707.1| hypothetical protein SPO0444 [Ruegeria pomeroyi DSS-3]
MAWIGVFLGTFAGLASSILACVLWELPLWAALLLYPLAGSAIAVAVILLFMLREIRVPAAEPVTGGRTVN
G
>gi|56695360|ref|YP_165708.1| hypothetical protein SPO0445 [Ruegeria pomeroyi DSS-3]
MSIYVRPRVPGATIFFTVTLANKGSGLLTDQIGLLRTTVWQTRRERPFHIDAWVVLPDHLHAVWTLPRGD
TDFSTRWGAIKARFTMGVRKAGFSPPPDLPVVRSGRYAGLKPGLRSEKREAGVWQRRFWEHHIRGPDEYL
AAVSFCHNDPVKHGLVTDAKAWPFSTVHRKMQTSGEMCRAGFSPPSVVGPG
>gi|56695361|ref|YP_165709.1| putative ABC transporter ATP-binding protein [Ruegeria pomeroyi DSS-3]
MIRFRPDLAPPTSAQTLAHCPATDVSVTGPANRITNRSRPMAAYQYVYHMQGVSKSYPGGKKCFENIHLS
FLPGVKIGVVGVNGAGKSTLMKIMAGLDKDFTGEAWAAEGAKVGYLPQEPHLDPNLTVRENVMLGVKAKK
DILDRYNELAMNYSDETADEMASLQDQIDAENLWDLDSQIDVSMEALRCPPDDANVESLSGGERRRVALC
KLLLEAPDMLLLDEPTNHLDAETIAWLQQHLIDYKGTILIVTHDRYFLDSITGWILELDRGRGIPYEGNY
SAWLEQKAKRLEQEAREDKAKQKTLERELEWMRQGQKARQAKSKARIQAYNEMANQSEREKVGRAQIVIP
NGPRLGSKVIEVEGLSKHMGDKQLIEGLDFSLPPGGIVGVIGPNGAGKSTLFKMITGQEQPDAGSIEIGD
TVKLSYVDQSRDDLKDGDTVWEAITGGAEIIQLGDAQVNSRAYCSSFNFKGGDQQKKVSLLSGGERNRVH
MARLLKEGGNVLLLDEPTNDLDVETLRALEDALVDFAGCAVVISHDRFFLDRICTHILAFEGDAHVEWFE
GNFEDYEEDKKRRLGPDALEPKRLKHKKFVR
>gi|56695362|ref|YP_165710.1| hypothetical protein SPO0447 [Ruegeria pomeroyi DSS-3]
MIYVILKIYKNVNISAVRALVPPDLGAKGHIKWGKTNMTCDSVKWTLTSGDVTVEVIATDDGFGNITFTY
ELVSGIADLNGFFIDIGNDGGDISKLSGGNNMKGSDSDGDRLDGFDIAEEIGTVGGNDEDTTSGTLTFTM
AELGISSLAELADAEIGIRATSVGEDREDSLKLADTGTYCPVEPPSDDDFPEWGQDISHVVFVFNQTVGD
TSGDGYYTIKVDYTDALVAAQGNDLDDYIDDFLFALINDDTNVPFLEPDADLMGVVIKGGLQTTEYYAYG
DYNTNGTDPDPLPAGIGFALPGDKGTVDPVNEIDLALSVDDSGDFIFA
>gi|56695363|ref|YP_165711.1| MOSC domain-containing protein [Ruegeria pomeroyi DSS-3]
MPPQRRRVMTDLQTLIAGWAQPGRVGWIGLRPERRAALIAVDEGLVGLDGLAGDHGRPGKRAVTLVQGEH
LGAIGAYLGRGAVSPLDLRRNIVVEGINLSALKGRAVRVGGAVLRLSVICAPCSRMEETFGTGGYSAVRG
HGGWCAEVLEPGLIKLGDPVRPAD
>gi|56695364|ref|YP_165712.1| nicotinic acid mononucleotide adenylyltransferase [Ruegeria pomeroyi DSS-3]
MRQGFPYARPGQVIGLFGGSFDPPHAGHVHVTREALKMFGLDRVWWLVTPGNPLKAHGPAPLDRRMEAAR
AMMRHPRVDVTDIEAHLGTRVTADTIAALRRIYPRVRFVWLMGADNLAQLHRWKDWRQIIETVPVGVLAR
PGDRISARMSPAARAYAPYRIDGQARHLLGRAEAPAWCFVNVPMVDVSSTRIRAAGGWSAAQQGRGQTGT
QDQ
>gi|56695365|ref|YP_165713.1| hypothetical protein SPO0450 [Ruegeria pomeroyi DSS-3]
MGRAIGIMFIAMSLIPAGDMAGKLLTGTYGAAPIYVAWSRFALGLLMLMPFVPAAAWRLLANWRIWFRAL
LLAGGILSIQSALRTEPLANVFAAFFVGPILSYALSALLLREPVTMLRSALMLLGFGGVLLVVRPGFGGS
PGLLLALLAGCFYGGFLTASRWLSPLGSPLALSLTQLAIAGLVLMPFGLSALPSFSPQVAALTLASALGS
MLGNLLLLVAYARAPATRLAPLVYFQLAAATGLGWAVFGDLPDLWTWAGLSLVLGAGLASALLRR
>gi|56695366|ref|YP_165714.1| D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase [Ruegeria pomeroyi DSS-3]
MVEAISRRVFLAGLGAALSHSAAYAEAPALSLRPPLRLKDARALAGPEAVLSGSGLSGRVAFAVADAETG
LELETVEPGLALPPASVAKALTALYALETLGPSHRFRTRVLADGPVENGVLKGDLILAGGGDPTLDTDAL
AALVRALKESGLREVRGAFKVYDGSLPEVFSIDPEQPEHVGYSPAVSGIALNFNRVHFEWKRAGKGWSVS
MDARSAKIRPAVAIAEMKVVSRALPIYTYEQRQRIDSWTVASQALGQDGSRWLPVRKPALYAGDVLQTLA
RSNGIVLGRVEVVKSLPGGARTLVHHDSAPLEDILRDMLKYSTNLTAEMVGLAATVARGKRPATLRASAE
EMSVWAAERYGLRGSRLVDHSGLGDASRMTARDLVAILVQAGKTGRLPRMLKDIPMRDQKGRVVKGHPIK
VAAKTGTLNFVSGLGGFMTAADGTVLAFAILTADPDRRAAIPPEDRERPEGARGWNARSKKLQQALIERW
GAIYGS
>gi|56695367|ref|YP_165715.1| hypothetical protein SPO0452 [Ruegeria pomeroyi DSS-3]
MTEQPTHPMTPQDCLVAIMMAVSASDENIRTAELVKIQSAVNMLPVFADYDIDRMKRVSQVVFDLFEQED
GLDALFGLVRDNLPERLFETAYALACDVAAADGTLAETELRLLEEIRYELNIDRLHAAAIERGARARHVV
>gi|56695368|ref|YP_165716.1| hypothetical protein SPO0453 [Ruegeria pomeroyi DSS-3]
MTAMLDSFATDLTAATSLHQPGNLPHPPHAIDAENVPLSGGTDPTYGEVRWRTLINGTEAAPRDMVLGIA
EFGPGHQLRPHRHTPPEFYLGLEGSGIVTIDGVPHEIRAGVALYIPGDAEHGTVAGPEGLRFAYGFASAS
FEAIEYRFTASA
>gi|56695369|ref|YP_165717.1| LysR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MERLPSFSGLTAFYAAARRGTLTAAAAELNVSQPAVSRRIAMLEADLGSPLFDRSHKPVRMTQSGRDLLR
ALQGGFGQIEAAVAQIRQAAQGKVVTVTAPSGFVAFWLIPQLGELEAAFEDVTIRIISQEYGEATRPGDI
AIRFGLPEDGTERRLLGDGVFPAASPLYLDRREMSGSDYDFARMTLLTMESARSQWHDWPSWFRSVGMSM
PQKARVLDFSSYAMLVNAALAGQGVCLCWDGVLDRFLEAGALVRLEGPEAVSSRGYFMAAREGLAAAPHV
RGILGWILEKSHK
>gi|56695370|ref|YP_165718.1| lysyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
MLHWHNRTAGPGAWGALPSPMETDMSNSRELALASKAWPFEEARRVLKRYEKAPPEKGYVLFETGYGPSG
LPHIGTFGEVARTTMIRRAFHEISDIPTRLICFSDDLDGMRKVPGNVPNQDMLREHLQKPLTSVPDPFGT
HESFGHHNNAMLRRFLDTFGFEYEFYSATEFYRSGQFDEILLRAAERYDDIMKIMLKSLREERQQTYSIF
LPIHPETGRVLYVPMKEVNAKDGTITFDDEDGREWTLPVTGGNVKLQWKPDFGARWAALGVDFEMYGKDH
STNTPIYDGICRVLGVPAPEHFTYELFLDENGQKISKSSGNGVSIDEWLTYASSESLAYFMYQKPKTAKR
MYFDVIPKAVDEYHQQLRAYPTQDLAAQLNNPVWHIHGGDVPASTLIVPFGMLLNLASVSGAEDKEALWG
FIRRYAPEASAESHPDLDQAAGFAVRYFNDFVKPTRVYRAPIEVEREALEELRAQLAAYDGPVEDEALQS
IVYAVGRDRFDPLRAWFGALYEVLLGASQGPRFGGFIALYGIPETIALIDKALAGELV
>gi|56695371|ref|YP_165719.1| hypothetical protein SPO0456 [Ruegeria pomeroyi DSS-3]
MEVGVTIPDEDKFQGRIHGERPEPKDPENLWWRLLHMILIAIMINLAQTILAVVTVVQFIIMAVSKSQPN
ERLADFGTDLGIWIAKAARFQTAASNVKPWPWTDLD
>gi|56695372|ref|YP_165720.1| hypothetical protein SPO0457 [Ruegeria pomeroyi DSS-3]
MRQLLFILACCVGLVGPAQAQSDEIKAVIGNQIEAFLADDFATAFTFASPMIREIFRTPENFGSMVRNGY
PMVWRPAEIRYLGLEEREGTLWQLVRVTDRQGLAHVLAYQMVNLESGWKINAVQVLETPPPSV
>gi|56695374|ref|YP_165721.1| hypothetical protein SPO0458 [Ruegeria pomeroyi DSS-3]
MILIGPLLHLGIRRQIGNRTPRFPQRPLWHHSIDSARLGPERQGCIGIDQPVVRCAGLVHLQPQGVGAAR
ADPMIGVPLIDQIPGPIEIQPRETGVDPLGPVDVSIDRAELVAGDCHAIDEMANPMRLDHDIAEPGRHLA
RQKDIVGDAQRAERESAIEVRVRVLFVSPFQAAIVDIVLGKSRARVSPDQYDTRCARPVVNGIALKEVVA
QDHMVLPRHDGKMTEPGRPAMAQLDVVGIGVEPDAAAVRHVQRLFRREKLAPVDQHALTATTDRGDSTIL
WPTDKTIVKRECSAVRSQPDRAAMGVTLELDVLHVELRQRAEAAEIQHVFEAAEGEDLGACRIIERRVQC
DLTGPHVFRAHIDFAPDTRSRHQGTHRNIGDIRHVVQLTRVIGVICRLRDKGIGIPSGTRHRHQLPVADH
PSGRETGPVWNSRLHVDRRGDRHIAPAHVQRFVIRPVQQRLKRLAKGGFLVTKGRDIGRKIKILGQQQHL
VDRHRHRALEIDLRCQADRLPQEISSARHENAAPSGCAIGGLECGRVVGDPIAHRTVITDIDLAQHVTQE
RAGDIGDLDIVDPHDAAIRPFEIEAEMTIERRRPPDHVDTAAIAGSHDARHLDHIAIAGQRGRGPLFRHA
ADMRTACRTGPPGDPNAGQVATDRLDPDLDLQVTARLQGRLPHIAQLLNRCGLLQFQAAAKIGIRRNKGR
IRRPIIGIRPRRAVAARPHIQPQLKGGRHEVDAVGDCLVHTNPFPNRATDDLPARFHVTGPGRTRTRQMG
RTKGLIPAHSTVTVTLPQTEGGGVSRT
>gi|56695373|ref|YP_165722.1| hypothetical protein SPO0459 [Ruegeria pomeroyi DSS-3]
MARSGAARTRHMKARWQVVSGAIGKGICMNKAITDGINFMPPAFQLGLNVWSSGDGTPGSDTYDGAPNAA
FVPADADFGGCLELQKTASVQKLRYMGQTPLQPGCYLQIKVRIKAISGNLPSVRVAGWAGAAGGAHVGGV
TEQGPSTTLTSYGDVVEVTGIVGSGNRGGVDMVWGASALYGHFGLDLEGSNGGIVRIDDIEITDITGAFL
RDMLSQVDVRDYGAVGDGVTDDSAAFEAADSAAGGRRVFVPGGTYFLGQTVSLASEIDFEGTVTMPVDKM
LLLTKNFDLPTYIAAFGDEETAFRKAFQALLNGSDHESLDMGGRNVSVTAPIDMQAAVPNRTSFSTRRVI
RNGQLVAVAGPAWDTDTFISQATYDPNDARKLNNVTNIANIPVGSLVTGAGVGREIYVRSKNVGAGEITL
NAPLYDAAGTQVFTFRSFKYMLDFSGFSSLSKFNMQNIEFQCNTHCSAIRLAPYGATFALYDCFISRPKD
RGITSIGGGCQGMLIDGCQFLSSEEALNVPDRSSIGFNTNANDVKLRHCRATRFRHFAVMAGQNHMILGN
HFFQGDAVDNGPRTAGIVLIGTYSSATFAENYVDNCSLEWTNEQDPNPDFNGGFSFSALSITDNIFLSGE
VAPWFSYIVIKPHGVGHFINGMTVTGNKFRSINGYIDRAERVDTSFSGLNFDRTRDLIYQGNTYHGVSTR
SANPLRLEVDQTSASDNWLINTDATLPFGAETRGVDAVVPQGPLRESGGAVAYLAPYAQVQQGTNQDQLR
LRWSEPVSGTVFVTVRADK
>gi|56695375|ref|YP_165723.1| hypothetical protein SPO0460 [Ruegeria pomeroyi DSS-3]
MVLPDPPFCCATVMTCPMRRLSHAASQHSARPPVHNGKTTATLRHNRTNQSLTKLREACDGGCGMGRLLI
ALWICMTAACPAAAGAWLREKGHGFTSASVTLYRFQGAYDYKTTAYAEWGMAERLTLGIDINEQPGLAGH
ALIFARYPLWDLGTKGRFAAELGLGAHHWLGDWAPMGKLTLSYGKGLETRWGNGWLAVDTGWERRSGTKT
NIFKLDMTAGLSTARRIDPMLQVETAYVPGHPLFWTITPSLLIEGSKGRTWVLGLERKSDLPGSLNIKFS
LWREF
>gi|56695376|ref|YP_165724.1| ParA family protein [Ruegeria pomeroyi DSS-3]
MGHVITVAQQKGGSGKTTLAVNLAVAFMRAGRRVALMDTDPQGSAGRWFMARLEAGGDPGLEFSTASAWG
VSYEVRKLAKDHDIVIIDTPPKADSDLRPALREADLVLIPVATSHLDLWAVEMVLYLAEREDKPALMVMT
RNRPGTRLAQDVAAKAQELNAELAQAALANRVTYAETLGHGRAALEAPKGPAHAEVTGLMREIEIALGL
>gi|56695377|ref|YP_165725.1| antibiotic biosynthesis monooxygenase domain-containing protein [Ruegeria pomeroyi DSS-3]
MPKIAKAAPVQTVITTFEMTPGTCQDLLEALTEAYADFISKQPGFVAAGLHVNDAQTRIANYSQWQRRED
FLAMLRTPEMRERNRRINEMCKSFEPVMYEVAETFDGN
>gi|56695378|ref|YP_165726.1| universal stress family protein [Ruegeria pomeroyi DSS-3]
MYHNILVPISFDAERDVSGPLKLAQLLATPEARVTLLHVVEHIPAYAISYMPTDYLAEARKALKKELDAL
AAQLPNATGVLIEGHSGRSILDWAETNNPDLIIISSHRPGMQDLLLGSTATQVVRHAQCAVHVVR
>gi|56695379|ref|YP_165727.1| hypothetical protein SPO0464 [Ruegeria pomeroyi DSS-3]
MVVSLVLLAGSLLLLGWSLLTFGSILTPALLVAALGVVVGVVLVLRFRLRAAPVWIVIDGSNVLYWRDET
PNLHTVRQCVEGLVRNGWTPLLWFDANVGYLVGSQYMGPHELSRALRYPASHINVAPKGTPADPLLIEQA
GDLGARIVTNDRFRDWVETYPQVADAGLFLRGSASDQGVSLRFAEEPARKRA
>gi|56695380|ref|YP_165728.1| pyridoxamine 5'-phosphate oxidase family protein [Ruegeria pomeroyi DSS-3]
MTDPYLPADAKTRAQARALIDSARHGALAVLQPGGLAPSVSRISLATDAQGMPVSLVSSLAAHTAALEAT
PACALLIGEPGAKGDPLTHPRLTLHCSAQLIPRGTPEHDALRARYLMLRPKAGLYADFGDFRFVRFAVAD
GLLNAGFGKAVRLSAEDLST
>gi|56695381|ref|YP_165729.1| formate/nitrate transporter [Ruegeria pomeroyi DSS-3]
MSDANPTGLDAYKPAEIARLVETAGVAKAGLGAAQTLTLAVLAGAFIGFGGAAYTMVMTGADTGFGPARF
LGGVVFSLGLILVIVGGAELFTGNALMVMAAVDRRITLAALLRNWGLVYLGNLLGAVGLALAFALTGLLD
GLMGDTAQAIARGKAALDPGAAFMRGVLCNAMVCLAVWLTFAARTAAGKILAILWPISAFVLLGLEHSVA
NMYLIPQGMLAGAEVTPGAALANLFWVTLGNILGGAGGVALAYRFAYLR
>gi|56695382|ref|YP_165730.1| GntR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MSRIPVWKTIALSLTEDIAEGRYGEGDRLPTEAQLAATHGVNRHTVRRALADLADQGLVHARRGAGVFVA
ARPTDYAIGKRVRFHKNIAAGGRIPGKRILALTTRAADSTESEALALPAGAQVHVYDGLSLADGQPIAVF
QSVFPAARFPGLPEVLTETRSVTAALQRLGVADFTRVSTRLTARPANATQALHLRLNEGAPLMFSTGVNV
DPDGRPVEYGRTWFAGDRVTLTLGED
>gi|56695383|ref|YP_165731.1| alkylphosphonate utilization protein PhnG [Ruegeria pomeroyi DSS-3]
MAEQEKETAARQGWMGLLARAPEAMLMALWNRVEERPAFDWLRAPETGGVMVRGRAGGTGAPFNLGEMTV
TRCALALADGTVGHAYVQGRSRAKAEAAALIDALMQTAAADTIRALVLDPLAAQMAERSEGRAARAAATK
VEFFTLVRGED
>gi|56695384|ref|YP_165732.1| carbon-phosphorus lyase complex subunit [Ruegeria pomeroyi DSS-3]
MMDGSSLYAGGFRDAPVDAAHAFRAAMSAMARPGDIRRIAGAEPPAPLSVAAGTLLLTLCDPETRVHLAG
AVDTDAVRQWLSFHTGAPLVDAAEADFALGSWADLMPLSRYRIGTPEYPDRSAALIVECDALENTGAVLS
GPGIRDTARLSLPDVDTLKGNAILYPLGCDFFFTCGDRVAALPRSTTIVAEG
>gi|56695385|ref|YP_165733.1| alkylphosphonate utilization protein PhnI [Ruegeria pomeroyi DSS-3]
MYVAVKGGERAIENAHAWLAEERRGDTSVAELSLAQIREQLSLAVNRVMAEGSLYDPDLAALAIKQARGD
LIEAIFLIRAYRTTLPRFGASRAVDTGAMACDRRISATFKDAPGGQVLGPTFDYTHRLLDFKLAAEGDVP
PAPSAPPRREPTPHITEFLGQEGLIQPEPVSDAVPGDLTREPLEFPADRALRLQSLARGDEGFVLGMAYS
TQRGYARNHAFVGELRIGRVTVEMEVPELGFAIEIGELELTECETVNQFKGSKTEPPQFTRGYGLVFGQS
ERKAISMALVDRALRWKELGEDNLGAPAQDEEFVLSHSDNIQATGFLEHIKLPHYVDFQSELELVRKLRR
EAEERIVHREAAE
>gi|56695386|ref|YP_165734.1| alkylphosphonate utilization protein PhnJ [Ruegeria pomeroyi DSS-3]
MTEQAYNFAYLDEQTKRMIRRAILKGLAVPGYQVPFASREMPMPYGWGTGGVQVSAATLTPDDRLKVIDQ
GADDTTNAVSIRKFFERTAGVATTEATQEATVIQTRHRIPEAELTEDQILVYQVPIPEPLRFLEPRETET
RKMHSLQEYGLMHVKLYEDISQHGAISTAYAYPVRVAERYVMDPSPIPKFDNPKMEMAAIQLFGAGREQR
IYAVPPYTRVVSLDFEDYPFEATKAEHPCDLCGAEDSYLDEVIMDDAGGRMFVCSDTDYCRSRREAAA
>gi|56695387|ref|YP_165735.1| phosphonate C-P lyase system protein PhnK [Ruegeria pomeroyi DSS-3]
MSPLLEVRGIEKRYGARIGCTNVSFDLYPGEVMGIVGESGSGKSTLLNCLAGHLVPDAGQVIFDTRHTGP
VDTVTMSEPERRMLSRTDWAFVHQHARDGLRMSVSAGGNIGERLMAVGDRHYGRIRASALDWLDRVEIDG
ARIDDRPTAFSGGMQQRLQIARNLVTGPRLVFMDEPTGGLDVSVQARLLDLLRGLVRRMGLSAIIVTHDL
AVVRLLADRLMVMKDGRVVESGLTDQVLDDPQHGYTQLLVSSVLQV
>gi|56695388|ref|YP_165736.1| alkylphosphonate utilization protein PhnL [Ruegeria pomeroyi DSS-3]
MIDIRDVSKSFTLHNQGSAVIRVMEGASLHVAPGECVALTGASGAGKSTLMRVIYGNYLAASGSVLVGGL
DVVQAEPREILQLRREVLGYVSQFLRVVPRVPTVEVVAEPLLALGADPDAARARAEALLSRLNIPERLWK
LSPTTFSGGEQQRVNIARGFAHAYPALLLDEPTASLDAANRAVVLELIEEAKARGAAIVGIFHDVEARAR
VCDRVVDVSAFTPGAAA
>gi|56695389|ref|YP_165737.1| alkylphosphonate utilization protein PhnN [Ruegeria pomeroyi DSS-3]
MTQVPVIAVVGPSGVGKDSVMTALATRDPRVHLIRRVITRPEDAGGEAFTGVSRQEFEAMRAAGAFALSW
EAHGLCYGVPMPSEVKQADARALLVNLSRGVLLRAQEVFHPFAVLSLTARPEVLAARLAARGREDAAEQA
RRLGRAGMALPEGVRRVITVDNSGPLERTVDAVLAHLQRESA
>gi|56695390|ref|YP_165738.1| hypothetical protein SPO0475 [Ruegeria pomeroyi DSS-3]
MTFLRYAIYFLPPASEAWAGFGASWLGWDVETGQELAHPAETGLDVAALTATPRKYGLHATMKPPFRLAE
GQDVDALRRACATLAASRPAVTLDGLEIARLGRFLALRPVGELGALNALAAACVTELDPFRAPATPQELV
RRRAARLSPEQDAHLLSWGYPYVLDQFRFHITLTGRLDDDMLMQAQTLLQRRLGPLLPVPFTLADLALVG
EAGDGRFHLIHRYALSR
>gi|56695391|ref|YP_165739.1| alkylphosphonate utilization protein PhnM [Ruegeria pomeroyi DSS-3]
MTDEVILANATLVLRGETVTGSLHIKGETIAGIDQGAHVPAGAVDCEGDFVSPGLVELHTDNLERHIQPR
PKVDWPHAAAILAHDAELAGTGITTVFDAMRVGSIPSGAGRYLQYARNLSRELWQLREASALKISHFLHL
RAEVCSETLVEELDEFAPEDRVGLVSLMDHTPGQRQFRDMTKLEAYMKGKHAMSDDTFLQHVSQLKGLRD
RYGDRHEIETVKAARRLGSVLASHDDTTAEQVAVSAGHGIRLAEFPTTIEAAEACHAHGIKVIMGAPNLI
RGGSHSGNVAAADLAERGLLDILSSDYVPSALLLSAVRLGALWGDMARGMATVTRTPAQAVGLDDRGEIA
PGLRADLIRFRMSQDVPALQSVWSRGRRVA
>gi|56695392|ref|YP_165740.1| hypothetical protein SPO0477 [Ruegeria pomeroyi DSS-3]
MRPHGKWGTPNRAQDPEKQIFNATLSVSYPKSPVLPTARHGAAIFAGQLCPMTELQAIREALYPEAPRKQ
TRRLRRADRTRAKALSPLRVLLLLASLPVIAGSTAIGVYMRTSPYPPELALRHLAALAGCETAALAGLPQ
ARRGEPGYHQRNDADLDGVACGTTLADAGMEARTPTQRAPGQAKFVRP
>gi|56695393|ref|YP_165741.1| hypothetical protein SPO0478 [Ruegeria pomeroyi DSS-3]
MRSLLFAATLFAAATPVLADEVTGIILAYDRVDGRIVLEDKTVWSLEFVEEIPEGLAVGDEVRIVFEAAG
EDGITKINAIHQE
>gi|56695394|ref|YP_165742.1| ISSpo8, transposase [Ruegeria pomeroyi DSS-3]
METSMITELKSVRDIWKKMPSERHARIFLEEMIWPSGRHCPHCGSLSSTPIRGRTARPGLYQCAERECCL
QFTVTTKTPMHATKLDLRIWIAAIFLMLTSSKGISSVVMARILGVNQKTAWKLGHAIRELMDEREAVSAR
LAGVVEVDEAYVGGAPKFKKGVKNKRGRGTGKPMVLVAADRTGQAKATLIPNAKGATLGPIMKEWIDPSS
ALMTDSNTAYRKIGRSFASHHTVNHGKRQHSRPSKGAHINTVEAVNSQVQRALIGVYHRLGRQHLQRYLD
EILWQWNHRQQEVKIRNRKTSSGTKTIATRVWKPIPVVDQMRGLLCCAVGRQLRRTPQWGLCWPIHLFEH
KGTFA
>gi|56695395|ref|YP_165743.1| acetyltransferase [Ruegeria pomeroyi DSS-3]
MSGFVIERANPSAPEAAALIARHVALMASQSPEESCHVLDGSGLDSPDVAFFLLRQAGVAIGMGALKTLS
DGALELKSMHTVSEARGSGAGRAMLEFLLDRARSQGAGGIYLETGSTDDFLPARRLYETYGFTECAPFEG
YAEDPWSTFMTLDLRAAA
>gi|56695396|ref|YP_165744.1| NADH-ubiquinone oxidoreductase family protein [Ruegeria pomeroyi DSS-3]
MRARIYQPARNAMTSGMAKTRKWVLEYAPGSAREVDPLMGWTSSSDTQSQVRLRFDSKEEALDYARAHGI
DAVVTEPHKRKPNLRARGYGENFATDRRGPWTH
>gi|56695397|ref|YP_165745.1| microcystin dependent protein, putative [Ruegeria pomeroyi DSS-3]
MSKNAFTTFATAAALSLSLIAPASQARAGTDPFVGELMLAGFNFCPRGWAEANGALLAISSNTTLFSLLG
TMYGGDGRTTFALPDLRGRVAIGVGTGPGLQPITQGERLGQPTTTQTIATMAPHTHLATSNASTSIHVSS
DDANIQDPGNAFLGTTSTPTYTTTQPDEALANGSATTGVTTTILSTGQGLPQENHQPSLGLKYCIALFGV
YPSRN
>gi|56695398|ref|YP_165746.1| 50S ribosomal protein L2 [Ruegeria pomeroyi DSS-3]
MALKSYKPTTPGQRGLVLIDRSELWKGRPVKSLTEGLTKSGGRNNTGRITSRRRGGGAKRLYRIVDFKRN
KFDVAATVERIEYDPNRTAFIALIKYEDGEQAYILAPQRLAVGDKVVASAKADIKPGNAMPFSGMPIGTI
VHNIEMKPGKGGQIARAAGTYAQFVGRDGGYAQIRLSSGELRMVRQECMATVGAVSNPDNSNQNYGKAGR
MRHKGIRPSVRGVAMNPIDHPHGGGEGRTSGGRTPVTPWGKDTKGTRTRNKNKASQKLIIRSRHAKKKGR
>gi|56695399|ref|YP_165747.1| 30S ribosomal protein S19 [Ruegeria pomeroyi DSS-3]
MSRSVWKGPFVDAYVLKKAAAVRESGRNEVIKIWSRRSTILPQFVGLTFGVYNGQKHIPVNVTEDMIGQK
FGEYSPTRTYYGHAADKKAKRK
>gi|56695400|ref|YP_165748.1| 50S ribosomal protein L22 [Ruegeria pomeroyi DSS-3]
MGKEKNPRRVAENEAMAKLRMLRTSPQKLNLVAAMIRGKKVGQALTDLTFSNKRIAQDVKKCLQSAIANA
ENNHNLDVDELIVAEAWVGKNLVMKRGRPRARGRFGKIMKPFSELTITVRQVEEQA
>gi|56695401|ref|YP_165749.1| 30S ribosomal protein S3 [Ruegeria pomeroyi DSS-3]
MGHKVNPIGMRLQVNRTWDSRWYADTKDYGNLLLEDLAIREFIKEECKQAGVARVIIERPHKKCRVTIHT
ARPGVIIGKKGADIETLRKKLANMTDSELHLNIVEVRKPEMDAQLVAESIAQQLERRVSFRRAMKRAVQN
SMRMGALGIRVNVAGRLGGAEIARTEWYREGRVPLHTLRADIDYALAEASTPYGIIGIKVWIFKGEILEH
DPQARDRKAQELQDGPAPRGAGGRR
>gi|56695402|ref|YP_165750.1| 50S ribosomal protein L16 [Ruegeria pomeroyi DSS-3]
MLQPKRTKFRKMFKGRIHGLAKGGSDLNFGTYGLKALEPERVTARQIEAARRAMTRHMKRQGRVWIRIFP
DTPVTSKPTEVRMGKGKGSVDYWACKVKPGRVMFEIDGVNDEIAREALRLAAMKLPIKTRVVVREDW
>gi|56695403|ref|YP_165751.1| ISSpo2, transposase [Ruegeria pomeroyi DSS-3]
MDHLEDAGETGAVRLGFDRRVRLEFHGSKISSDGGLLLFRELDEVLGLHDIARGVLRDTRTGHNRLHSIV
GLLRQSVFGRLAGYEDVNDADRLALDPVMQQVVGGRAVDTNAASASQMGRFETKVRATAEKRAALAELSG
QWIDRVHASAPPKWITLDIDSSVCPTHGAQEGTAWNGHFGCICYHPLFVFNQFGHLECCALRPGNVHSAD
GWEEVLKPVIARYADRHLMRFFWADAAFAIPGLYEALEAENCFYAIRMRANRILQGRIAHLLKRPVGRPP
NHVRRIYGDFEYQSASWDKPRRVVAKVERHPGELFPRIGFVVTNLPMVPDWIVHFHNQRGTAEQRIKEGK
QAINWTRLSCKGLAQNEVRLQLHALAYNLGVFLQGADLPEEVAEWSLTSLQTRLIKIGARVVRHARAIKF
QLAEVAASGDRFRLILTAIQRLRAPPVPS
>gi|56695404|ref|YP_165752.1| calcium-binding domain-containing protein [Ruegeria pomeroyi DSS-3]
MELLFLLGFGLLGAGLAMTGDDDEESAPAEGFTFDDDQAVGTENDDILTVGDFPEGVTTIPEILGQGGDD
LIDLNVPPDLYDDFGDDVINANGVSGRVDGGAGDDTITGFFSGGTIAGGAGDDSIDVASLSSDSLIVDGG
EGDDFIDATDAAGGQALGGAGNDTIVAQGVGEAEGGSALFPDGGEGDDLIRFTAYSDFFPGYFVADQVVR
GGEGADTFEILVNEGQHDSSLDDDVYSDTSLWSVPNVEIADFEPGVDKLVIEASRHDDAYELADVRMEEV
DDGNGGLSTNVILAYEHDTLNTREIVVSLNATGVSCSDIEVEYLGETYPVPTT
>gi|56695405|ref|YP_165753.1| hypothetical protein SPO0491 [Ruegeria pomeroyi DSS-3]
MCAAHAARPLALVMRLGYETAMSQIESLFVTRLYRARLSEHGPAIDPEEMEASCYSIAEDDEAGQEWCEE
NGYPGYTSYASLTDLPWRFPIFADLVTSLDAHVAAFAADLEFDLDGRKLVLEDLWINILPQGGMHSSHLH
PHSVISGTTYVAMPEGASALKLEDPRSGRMMAAPTRTKTARRELQPFIYMKPDVGDVLLWESWLRHEVPM
NMSEEERISVSFNYRWD
>gi|56695406|ref|YP_165754.1| cyclic nucleotide-binding domain-containing protein [Ruegeria pomeroyi DSS-3]
MVDVPRRVTAARIRSLSPGCASPLPETCRRAIAGGGRPVCPPGPEHAGMELDFIIEGWAGHLSYLLLVLS
MLMRHMLWLRLFVIASAMAGIAFDHFWLQNPVGVFWQSLLVLVNVAELALLWRNDRRARFTVEEDRFRET
LLSGLSPGRCRRLLDLGRWETLSTGTVLTREGQRPEFLTYMASGAVRIERQGRLLRLVGEGHFIGEMSMM
GDGLAVATAVMQDSGRVWRIERVKLDRLRESSPAAMAAIETGVARDMRAKLAYQNTGPDTAAQPADGPAD
>gi|56695407|ref|YP_165755.1| 50S ribosomal protein L29 [Ruegeria pomeroyi DSS-3]
MNAQELRNKTPDQLREDLVTLKKEAFNLRFQQATGQLENNARIRTVRRDVARVMTVLNEKAAEAAN
>gi|56695408|ref|YP_165756.1| 30S ribosomal protein S17 [Ruegeria pomeroyi DSS-3]
MPKRILQGTVTSDANAQTVTVLVERRFTHPVLKKTIRKSKKYRAHDEKNAFKVGDTVRIIECAPKSKTKR
WEVLEA
>gi|56695409|ref|YP_165757.1| 50S ribosomal protein L14 [Ruegeria pomeroyi DSS-3]
MIQMQTNLDVADNSGARRVQCIKVLGGSKRKYASVGDIIVVSVKEAIPRGRVKKGDVRKAVVVRTAKEVR
REDGTAIRFDRNAAVILNNNNEPVGTRIFGPVVRELRAKNFMKIISLAPEVL
>gi|56695410|ref|YP_165758.1| 50S ribosomal protein L24 [Ruegeria pomeroyi DSS-3]
MAAKLRKGDKVVVLAGKDKGKEGTITSVDPKAGKAVVDGVNIAIRHTRQTQTSQGGRLPKALPIDLSNLA
LLDKNGKATRVGFRMEGDKKVRFAKTTGDVIDA
>gi|56695411|ref|YP_165759.1| 50S ribosomal protein L5 [Ruegeria pomeroyi DSS-3]
MLDAANYTPRLKAQYAETIRAALKEEFGYKNDMMIPKLEKIVLNIGCGAEAVKDSKKAKSAQEDLSKIAG
QKAITTTAKKSIAGFRVREDMPMGAKVTLRGERMYEFLDRLITIAMPRIRDFRGVKPSFDGRGNFAMGIK
EHIVFPEIDFDKVDEVWGMDIVIATTAKTDAEAKSLLKHFNMPFNA
>gi|56695412|ref|YP_165760.1| 30S ribosomal protein S14 [Ruegeria pomeroyi DSS-3]
MAKKSMIEREKKRERLVAQYAAKRAELKEIANDESRPMEERFKARLKLAKLPRNSSATRLHNRCQLTGRP
HAYYRKLKVSRIMLRELGSAGQIPGMVKSSW
>gi|56695413|ref|YP_165761.1| 30S ribosomal protein S8 [Ruegeria pomeroyi DSS-3]
MNDPIGDMLTRIRNAQLRGKSTVSTPGSKLRAWVLDVLADEGYIRGYEKSTDVNGHPTLNIELKYYEGEP
VIRELKRVSKPGRRVYMGVKDIPSVRQGLGVSIVSTPKGVMSDANARSNNVGGEVLCTVF
>gi|56695414|ref|YP_165762.1| 50S ribosomal protein L6 [Ruegeria pomeroyi DSS-3]
MSRIGKKPVELPSGVSAAVSGQTIEVKGPKGARSFTATDDVTITVDGNVVSITPRGMSKRARQQWGMSRT
MVANLVAGVTEGFKKELEITGVGYRANAQGNTLKLNLGYSHDVDFTVPAGVTVSTPKQTEIVVEGIDQQQ
VGEVAAKIREWRSPEPYKGKGIRYKGEFIFRKDGKKK
>gi|56695415|ref|YP_165763.1| 50S ribosomal protein L18 [Ruegeria pomeroyi DSS-3]
MANSKRTLFLKRRLRVRNKLRKVNAGRLRLSVHRSNKNISAQLIDDVRGVTLAAASTMEKDLGVVGKNNV
EAAKKVGAAIAERAKKAGVEEAYFDRGGFLFHGKVKALADAAREGGLKI
>gi|56695416|ref|YP_165764.1| 30S ribosomal protein S5 [Ruegeria pomeroyi DSS-3]
MAERENRRGNRRDREEAAPEFADRLVAINRVSKTVKGGKRFGFAALVVVGDQKGRVGFGKGKAKEVPEAI
RKATEQAKRQMIRVQLREGRTLHHDIEGRHGAGKVVMRAAPEGTGIIAGGPMRAVFEMLGVKDVVSKSLG
SANPYNMIRATIDGLKKEQSPRSVAQRRGKKVADILPKRDEAPAAEAAEA
>gi|56695417|ref|YP_165765.1| 50S ribosomal protein L30 [Ruegeria pomeroyi DSS-3]
MAKTIVVKQIGSPIRRPADQRATLVGLGLNKMHKTRELEDTPSVRGMIRKIPHLVEIIEERG
>gi|56695418|ref|YP_165766.1| hypothetical protein SPO0504 [Ruegeria pomeroyi DSS-3]
MAANTVSTLGYLFCQLQNLPGTRTSLDLSFGRANEFNWDIC
>gi|56695419|ref|YP_165767.1| ribosomal protein L15 [Ruegeria pomeroyi DSS-3]
MLHRPRISGGVLHFGHLLRDAFTASIRPRWPQGRKNQQARNAVVGPSRFVGHIRRRRSEMKLHELSDNPG
ATKKRMRIGRGPGSGKGKMGGRGIKGQKSRSGVAINGYEGGQMPLYQRLPKRGFNKPNRKAFAVVNLGLI
QKFVEAGKLDGAAAITEDALVASGLVRRKLDGIRVLAKGDFNAKLNIEVTGASKSAVEAVEKAGGSLKVT
NAAAAE
>gi|56695420|ref|YP_165768.1| preprotein translocase subunit SecY [Ruegeria pomeroyi DSS-3]
MVSAAEQMAANTSWSALGKATDLRNRILFTLGLLIVYRLGTFIPVPGIDGVALREFMEQAGQGIGGMVSM
FTGGALGRMGIFALGIMPYISASIIVQLLTAMVPSLEQLKKEGEQGRKKINQYTRLGTVALATVQAYGLA
VSLESGDLATEPGMYFRFATMITLVGGTMFLMWLGEQITARGIGNGVSLIIFVGIIAEVPAALAQFFASG
RSGAISPAVIIAIILMVIAVITFVVFMERALRKIHIQYPRRQVGMKVYDGGSSHLPVKVNPAGVIPAIFA
SSLLLLPVTISTFSSGAANGPVMSWLLANFGPGQPLYLLFFVSMIVFFAYFYTFNVSFKPDDVAQNLKNQ
NGFVPGIRPGKKTAEYLEYVVNRVLVLGSAYLAAVCLLPEIMRGQFNVPFYFGGTSVLIIVSVTMDTIQQ
VQSHLLAHQYEGLIEKSQLRGKNRKRTNRKGPARR
>gi|56695421|ref|YP_165769.1| adenylate kinase [Ruegeria pomeroyi DSS-3]
MNIILLGPPGAGKGTQARHLVETRGMIQLSTGDMLRAARSSGTEMGKKVAAIMDAGKLVTDEIVIGLIEE
QLTTQTGAGFIFDGFPRTLAQADALAALLAKLGQSLHTVIEIRVDDEALVDRISGRFTCGGCGEVYHDKT
KPTKVDGVCDNCGSTEMVRRADDNADSLRTRLMEYYKKTSPLIGYYYAKGDLRPVNGLADIKEVTASIEA
ILG
>gi|56695422|ref|YP_165770.1| hypothetical protein SPO0508 [Ruegeria pomeroyi DSS-3]
MKRILIGLAILAGLLAGLALAATLLATGKRPVPDQLAGYHETTLSVGHRDVPVSLHIWYPAAQDGTAELV
GQNALFYGQYVLRDAKPAPGAHPVVVFSHGSGGNANNHGWLATELARQGMIVVAPNHPGTMSRDSDPHRT
PHIWERARDLHAILDSLETNPPLGMQPDMDRVASAGFSLGGFSALSIAGVRVSKAAFIDYCDRHAGEFDC
GWMQAASVDFAAIDPAAYEADYRDPRIKATVSIDPALPQAMTGDSLTAATLPILLVSLGQGEEVPPATRV
DAMARQMPQARLVETPGAWHFSFLSECSTLGWIIIGLMGEENICSDIGMRDRGVLHEELKAVISTFLSEN
LALSPSG
>gi|56695423|ref|YP_165771.1| 30S ribosomal protein S13 [Ruegeria pomeroyi DSS-3]
MARIAGVNIPTAKRVPIALTYITGIGNTSAKAICEAVGIDATRRVNELSDAEILAIREHIDANYSVEGDL
RREVQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGKKK
>gi|56695424|ref|YP_165772.1| 30S ribosomal protein S11 [Ruegeria pomeroyi DSS-3]
MARDKTRTTKKKERKNIASGVAHVNSTFNNTKILISDVQGNAISWSSAGTMGFKGSRKSTPYAAQLAAED
AGRKAQDHGVKTLEVEVQGPGSGRESALRALAAVGFNITSIRDVTPIAHNGCRPPKRRRV
>gi|56695425|ref|YP_165773.1| DNA-directed RNA polymerase subunit alpha [Ruegeria pomeroyi DSS-3]
MIHKNWAELIKPTQLEVKPGNDPARQATVIAEPLERGFGLTLGNALRRILMSSLQGAAISSVQIDNVLHE
FSSVAGVREDVTDIILNLKQVSLRMDVEGPKRLSVNAKGPAVVTAGDISESAGIEVLNRDHVICHLDDGA
DLFMELTVNTGKGYVSADKNRPEDAPIGLIPIDAIYSPVKKVAYDVQPTREGQVLDYDKLTMKIETDGSI
TPDDAVAFAARILQDQLSIFVNFDEPESAGRQDDDDGLEFNPLLLKKVDELELSVRSANCLKNDNIVYIG
DLIQKTEAEMLRTPNFGRKSLNEIKEVLSGMGLHLGMDVEDWPPDNIEDLAKKFEDAF
>gi|56695426|ref|YP_165774.1| 50S ribosomal protein L17 [Ruegeria pomeroyi DSS-3]
MRHARGYRRLNRTHEHRKALFANMAGSLIEHEQIKTTLPKAKELRPIVEKLITLGKRGDLHARRQAAAQL
KEDKDVAKLFDVLAERYKDRQGGYVRILKAGFRYGDMAPMAIIEFVDRDVDAKGAADKARLAEEEAAAEE
>gi|56695427|ref|YP_165775.1| hypothetical protein SPO0513 [Ruegeria pomeroyi DSS-3]
MRTSSPAGYSGRPLVAKLGFKPGWSVRAINPPPHYADLMAEAVDIRFDPDARDADAAHLFLHGPEPLAEV
AATEIAHLRPGGMLWLSWAKKSSPRHAGITEDLLRAEVLPLGWVDVKVCAVDADWSGLKFLRRRG
>gi|56695428|ref|YP_165776.1| periplasmic serine protease [Ruegeria pomeroyi DSS-3]
MIRAILLCLPLVLAAPVQAETRVPTSRAEIGLGFAPVVKKAAPAVVNIYARIITAGRQSPIFDDPFFRDF
FRGFGAPQPRVQNSLGSGVILSDDGYVVSNYHVVGMASEIRVVTTDRREFTAQVVLGDEESDIAILRLDA
ARDLPFLALRDSDHVEVGELALAIGNPFGVGQTVSSGIVSGLARSGAATGNGRGYFIQTDAPINPGNSGG
ALIDVNGDLIGINTSILSRSGGSNGIGFAIPANLVAEFLRQARQGNSSFAQPWAGIAGQPMTADIADSLG
LVLPEGVVISDLHPESPLAQAGFAVGDVVTEVDGQTVNSPAEMKFRMSVAGIGGEARMTRLRQGQRETLS
VALIEAPDAPPAQETTLGERTILPGLTVARLNPAVIARLGLPLSARGVVVLDPGPYGARAGLQPGDVLGA
INGDQVDSPRDVERALSEAGRRVQIDLQRRGQRVSLRFRL
>gi|56695429|ref|YP_165777.1| recombination factor protein RarA [Ruegeria pomeroyi DSS-3]
MADLFDTGAKPSPEREPPRPLADRLRPQSLGEVIGQQQVLGPEAPLGVMLASGSLSSLVFWGPPGVGKTT
IARLLAQETDLHFVQISAIFTGVPDLKKVFEAARIRRGNGQGTLLFVDEIHRFNKAQQDGFLPHMEDGTI
LLVGATTENPSFELNAALLSRAQVLVLERLSAEDLEHLTARAERELDRELPLTPEARLALQEMADGDGRA
LLNLIEQVAAWKVAAPLEREALAARLMRRATKYDKSGDEHYNLISALHKSVRGSDPDAALYWLARMLTGG
EDPRYLARRITRMAVEDIGLADPQAQSVCLHAWEIYERLGSPEGELALAQAIVYLALAPKSNGAYVGYKA
AMRLAKQSGSAPPPKHILNAPTGLMKDQGYGAGYAYDHDAEDGFSGQNYFPDGMERPQLYQPVERGFERE
LKKRLDYFARLRAQREQG
>gi|56695430|ref|YP_165778.1| ribosomal large subunit pseudouridine synthase C [Ruegeria pomeroyi DSS-3]
MSGVQMITVGEGDGDQRLDRWFRRMFPHVGQGRIEKMCRKGELRVDGARAKPATRLEVGQQVRIPPLPAP
GERPEPVKSRVSDSDAKLIRACVLHRDDDIIVLNKPAGLAVQGGSGQTRHVDGLSEALRFGNDENPRLVH
RLDKDTSGVLVLARTREAAARLTAAFRHRNTRKIYWALVAGVPTPYLGEIKTGLVKAGGHGARGEGEKMN
VVHLSELDATPGAKRAHTYYATLYRVAGRASWVAMEPVTGRTHQLRAHMAGIGHPIIGDGKYGGSGQENL
GDGWGAQLGGIISKKLHLHARSLSFEHPSTRKKVTFTAPLPEHMRESWDTFGWTEDLAAEDPFEELM
>gi|56695431|ref|YP_165779.1| HAD family hydrolase [Ruegeria pomeroyi DSS-3]
MSQPLHLILFDVDGTLVDSQAAIVGAMTAAFDALSLPVPARADILSIVGLSLPQAMARLAPGQSETTQAR
LVEAYKQSYHATRLALGAGHSPLYPGAREMLEQLHAVPHYLLGVATGKSKRGLDALIEAHGLERVFVTRQ
VADHHPSKPHPSMIETALAETGTAPGHAAMIGDTSFDMEMAAAAGIAGIGVSWGYHPPRALSRARCIVDT
FPQLPPALTQIWT
>gi|56695432|ref|YP_165780.1| hypothetical protein SPO0518 [Ruegeria pomeroyi DSS-3]
MNDMSDWKPKRFWKQAAVAETAEGYAVELDGRPVRTPAKAPLLLPTRALAEAIAAEWDAQESEVDPINMP
FTRTANAAIDKVRIQQAEVADMLAAYGDSDLLCYRADSPAELVELQAQTWDPALDWAAETLGVRLRPVQG
VMHQPQPASAIETLTRKVHALNPFQLAAFHDLVSLSGSLVLGFAAALNWRKADEIWQISRLDETWQEEQW
GPDDEARALAAVKRAAFLHAKAAYDIST
>gi|56695433|ref|YP_165781.1| glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein [Ruegeria pomeroyi DSS-3]
MSDIAPKLGPIEGDSSFEIRSGANVCRSNRSGTGVENQEEVKMKKSVFLGALTVAGMAAGVAAAGTMDDV
KARGKLNCGVTTGLVGFAAPDSNGEWKGFDVALCRAVAAAVLGDGNAVEFVPTTGKTRFTALASGEVDML
ARNTTWTFSRDVDLKFEFVGVNYYDGQGFMVPKSLGVSSAKELDGATVCIQTGTTTELNLADFFRANNIS
YEPVPIETNAEAQQQYLAGACDVYTTDASGLAATRATFENPGDHVLLPEIISKEPLGPLVRHGDHEWGDV
VRWTLNALVSAEEMGITSANIDEMSAGTNNPEINRILGSEGTLGEMLGLDAEWAKRAIKVGGNYGEVFAQ
NIGESTPIGLARGLNAQWTDGGLLYSPPFR
>gi|56695434|ref|YP_165782.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MTTLTDPPKEQFRLSMLLYDTRYRSATIQVIAMIGFMLLAAWLISNTAQNLAALGKPIDFGFFSEPASYD
INQRLLDYSSRDTHLRAAFIGLLNTLVVAVLGCITATVLGVIIGVLRLSNNWIVARLMTIYVEGFRNVPV
LLWIVFIMAILIETLPAPRAFRGDDATASMMLNDSVAVTNRGVYIPDALFSNSLGNVHLFGESSLRFDIS
LDLMLILIVLGGSLWVSNFLRKRADRIQEQTGDRPVTWWQRLAVVVLPTGLVLVLLGFHLGYPELKGFNF
QGGTHLRNSLIALWLALSLYTAAFIAEIVRAGILAISKGQTEAASALGLRSNKIMSLVILPQALRVIIPP
LISNYLNLTKNSSLAIAVGYMDITGTLGGITMNQTGRELETILLLMLVYLTISLSISAVMNWYNESVKLK
ER
>gi|56695435|ref|YP_165783.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MSDIGFVRTEMLPEREPPASTVGALGWARANLFSNWFNSVLTLASLYAVFAILAAVLPWIFSPTWNGTSL
SNCREILTAAGSVGDHGTSGACWGVIRERWIQLLFGFYPSELYWRPILAFILLGVALAPVLFSDKMPSKM
LIFSGLYPFIFPWLLWGGTIWGPIAALLGFVLGWVIYSAVSKTMSSLIGILLGAAAALVWWLVLAGFFVG
VFDSVLAIGIEAVESRKFGGFMLSITIGVVAIACSLPLGIVLALGRQSDLLIVKYICVGFIEFIRGVPLI
TLLFVASTLLNIFMPPGTNFDIILRVLIMVTLFAAAYMAEVIRGGLAALPKGQYEGADSLGLNYWQAQRL
IIMPQALKISIPGIVSTFIGVFKDTVLVSIIGLLDPLGLSNAIRADANWNGIVWEIYGFIALIFFVFCFG
MSRYSMYLERKLHTGHR
>gi|56695436|ref|YP_165784.1| glutamate/glutamine/aspartate/asparagine ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MSELAIDREIDRSKMQVSDEVAIEITNMNKWYGAFHVLRDINLTVYQGERIVIAGPSGSGKSTLIRCLNA
LEEHQQGKIVVDGTELSNDLKNIDKIRSEVGMVFQHFNLFPHLTILENCTLAPIWVRKTPRKEAEETAMH
FLEKVKIPEQALKYPGQLSGGQQQRVAIARSLCMRPRIMLFDEPTSALDPEMIKEVLDTMIELAEEGMTM
LCVTHEMGFARQVANRVIFMDAGQIVEQNEPEEFFNNPQSERTKLFLSQILGH
>gi|56695437|ref|YP_165785.1| phosphoglycerate mutase family protein [Ruegeria pomeroyi DSS-3]
MTRILILTRHAKSAWDDISLGDHERPLNKRGRRSAQAIGAWLRKRGYLPDQVISSDAVRTRETWTQMSAE
MGQAGGDPTFTRSLYLAPAQHILANLRQASGRVVLLLGHNPGIAEFAGQIVDEAPAHARFFDYPTGATTV
IEFARDTWGDIGWHQGEVLDFIVPRELTD
>gi|56695438|ref|YP_165786.1| hypothetical protein SPO0524 [Ruegeria pomeroyi DSS-3]
MTLERISAEAAASALIVMGALHPADAAGTVVLLGTGPGFWPVFSAAQEYGDGQRDPVDRWSKRVIGAIAA
NLGAETAFPSDGPPYPPFIAWALASGRFHTSPVGMMVHDQVGLMISLRGALLLPDRIDLPVADAPSPCDS
CDAPCTRACPVGALAAGRAYDVDACRGYLDTAAGSACMEAGCAARLACPLSAGAARDPAQSALHMRAFLR
R
>gi|56695439|ref|YP_165787.1| sterol desaturase,-like protein [Ruegeria pomeroyi DSS-3]
MENESLVRLAMFVGLFVLFAIAERLAPRRMVHPRRPRRWLTNLTISVLNTVTLRALAVGLPLLAVGAALD
ASALGWGLFNHLGWPGWVEVLLAVLILDFAIWGQHLITHKIPLLWRLHRVHHADTDIDVTTAIRFHPVEI
ALSMLLKIGLVYLLGPSALAVILFEILLNGTALFNHSNLRLPLALDAVLRKVLVTPDMHRVHHSVLREEH
DSNYGFALSIWDRMMGTYVAQPAKGHDEMTIGLAWQDDRPTRLGWSLLLPFRRR
>gi|56695440|ref|YP_165788.1| acetylglutamate kinase [Ruegeria pomeroyi DSS-3]
MKTRDMNRDWIATAATLNAALPYLQRYDDAIVVIKLGGHAMGSDEAMESFARDVVLLRQVGVNPVVVHGG
GPMINAMLKKLDIQSEFVNGKRVTDVATVEVVEMVLSGVVNKRIVQEINRQGGKAVGLSGKDANLMICDQ
TNPDLGFVGTPTEMNPDLLRNLFAHDIIPVIAPLGAGREGETFNVNGDTAAGAIAAALKADRLLLLTDVS
GVKNGEGEVLTELKAGQIREMIADGTIAGGMIPKTETALDALDNGVRAVVILDGRVDNAVLLELYTEHGA
GSLIRRD
>gi|56695441|ref|YP_165789.1| short chain dehydrogenase/reductase family oxidoreductase [Ruegeria pomeroyi DSS-3]
MIGSARNQSRGRIMTRKTLVLTGASRGIGHATVRRFVAEGWRVITCSREPVPPGCPWSSGENNHVQIDLS
DPQATIAGAEIIRAKLDGRLDALVNNAGISPKGSDGERLSTLSTDLSDWGHVFHVNFFAPVVLARSLKDE
LAAAKGSVVNVTSIAGSRVHPFAGAAYATSKAALAALTREMAHDFGPLGVRVNAIAPGEVETSILSPGTD
KIVEKLPMQRLGQPSEVAAAIYFLCSPESSYISGTEIEVNGAQHV
>gi|56695442|ref|YP_165790.1| hypothetical protein SPO0528 [Ruegeria pomeroyi DSS-3]
MADSQTNARGTMHPLAQKFYFAAWRWHFYAALYVIPFLLILAVTGLMMMFITQFDGRDGEKIAVQPQSTE
LSFDAQSAAVLQAQPGTIVEWIGPKAPDLAAVFRVKTPEGQRLVALDQYSGEVLSIWDRRAGWYDLADNI
HSTLLIGDLGDRLIEIAAGLGIVLILTGLYIWWPRDNAMSALVPNLRARGRALWKSLHAVTGFWISALLL
VFLVSGLSWAGIWGGKLVQAWSTFPAEKWDNVPLSDDVHASMNHGHTNDVPWALEQTPLPASGSEAGVTG
LPEGQPVSAENLIALGRAMGMEGRFRLAYPAGGTGVWTINRDSMSGDSDDPFIDRTIHVDQYTGKVLADV
RYDDYSWAGKAMAVGVPFHMGLMGGWNFALNIVFCLSVIFLCVSGVVMWVKRRPARSLRLAAPPEPADMP
MWKGAALVAVLVSLMFPLAGLALIAALAFDVLILSNIPALRRALA
>gi|56695443|ref|YP_165791.1| hypothetical protein SPO0529 [Ruegeria pomeroyi DSS-3]
MTFLTHFSAVLSLLAVVLTSAIPQGWMPMRKDDRILLVICTEEGEARQWVDLAPDSPAHEDESDARPSCH
FGGLNQVAILAQPPLLMTLNHAQRTRWDNLDFTHRSAGFFPLYDARGPPHLS
>gi|56695444|ref|YP_165792.1| ribosome biogenesis GTP-binding protein YsxC [Ruegeria pomeroyi DSS-3]
MTALPFPVAEEPDAFTAETGRKLFAGPSEFVKGVVAMSGLPPADRVEVCFAGRSNVGKSSLINALTGTKG
LARASNTPGRTQEINFFTQGPELYLVDLPGYGYANAPLKVVEKWQKLLKQYLSGRQTLRRAFVLIDARHG
VKAVDDEIMKLLDTSAVTFQCVLTKADKVKAAERDKVLAQVRAALAKHPAAYPEIVLTSSEKGDGIATLR
SIIAHLE
>gi|56695445|ref|YP_165793.1| MOSC domain-containing protein [Ruegeria pomeroyi DSS-3]
MTGTVTGLWRHPIKSHGREALDSVTLSPGQTMPGDRVWAVAHEMSQADGSEWVHCGHFSRVSKVPELMAI
SATLNGDRVTLRHPRRPDLDFAPDAEANRFLDWVKPLMPQDRAQSARIIRVPGRGMTDSDFPSVTLCNMA
SHRAVEQRIGHALSPLRWRGNIWFDGLPLWEEFDWLDREVQIGEVVFAVRERTDRCAATTTNPETGKRDA
DTLGALDHWGHRDFSVRAEVIRGGTIRLGDEVRPL
>gi|56695446|ref|YP_165794.1| putative inner membrane protein translocase component YidC [Ruegeria pomeroyi DSS-3]
MDDQNKNLILATALSFLVILVWFILFPPPEQTEAPATEIATTNGTAVQTPTAAATEGGAGEVPALDSAAP
TQAEAPRVQIDTPRLKGSVSLLGGRIDELSLKDYRVSLDEDAEIVEMLTPAGSTSAYYALYGWAPGAGLN
AADVPGPLTEWSLESGDTLSVGTPVTLSWSNGSGVTFRRTLAVDEDYMFTVTQSVENGSAAPIGAAPYGI
LARHGIGEDADLPGLKNFFILHEGVVAMNDGTLSEIDYKDVRKFDIDPNEGAQAEVFQNKSDGWIGFTDH
YWMATLIPGSGTAFKSAAKYDARRKIYQAETVLPTMSVAPGESAEVTTRLFAGAKEWESIRAYQQDGVQK
FLDSIDWGWFFFLTKPIFWLLHQINGLIGNMGWSIIGLTLIIKAIVFPLALKSYVSMAKMKELQPQMEAL
KEAAGDDRQKMQQGMMELYKKEKVNPAAGCLPILLQIPIFFSLYKVIFVTIELRQAPWFGPFRDLSMPDP
TSIMNFFGWLPWAGPEAGSLTATILIGILPLLLGISMWLQQKLNPAPTDPTQAMIFAWMPWVFMFMLGSF
ASGLVVYWIANNTITFTQQYIIMRSHGYKPDVFGNIKSGFARRAKADKK
>gi|56695447|ref|YP_165795.1| diguanylate cyclase, putative [Ruegeria pomeroyi DSS-3]
MRIKPSLTRIRNAVVPVLTGPPILAFLPAVTLGAFWLGGEIALLLISLGLPLMFAFAGAFGKWPVNHQLP
RDSVTGLMLKDGFEGALTHIHAMAAETDRKSACFIIELDDYADLVDHHGQEAGDLVALRSGERILSAVRN
NDVVARLGDRRFAVCLAPVPQLDLELCIQLAGRMQSAVEDPISLDGVAIYVSCSIGFCQNRRAPGSSASD
WLDAANVALAAAQGAGPSAIRAYAPDMERRPSGAPDLRDEIQAALENGQIQPWYQPQISTDTGKVTGFEA
LARWNHPTRGLLAPNLFLPVIEEAGLMERLGQVMLYHALTAVKAWDSAGVDVPRVGVNFASDELRNPGLV
ERVQWELDRFDLTPDRLSVEILETVFSNTPDDVITRNIAGLGKLGCRIDLDDFGTGHASIASIRRFDISR
IKIDRSFVMKADRDPEQQRMIAAILTMAERLELETLAEGVETVGEHALLAQLGCDHVQGFGIGKPMPFDQ
TLDWIAHHDAKLQDAPRIGRETG
>gi|56695448|ref|YP_165796.1| hypothetical protein SPO0534 [Ruegeria pomeroyi DSS-3]
MLDENEDIHPLFAGAPATTEFKKLRKRIVRYTREAIEQYGMVERRADGSTPKWLVCLSGGKDSYTLLAVL
YELKWRGLLPVDLLACNLDQGQPGFPSTVLPEFLDRMGVPNRIEYQDTYSVVVDKVPQGRTYCALCSRLR
RGNLYRIAREEGCSAVVLGHHRDDILETFFMNLFHGGRLATMPPKLVNEEGDLFVFRPLAHVAEADCEKF
ARAMNYPIIPCDLCGSQDGLQRQQVKQILDGWEKNRPGRRQVMFRALMNARPSHLLDPKLFDFQGLELGS
REKGENFGEIPLLR
>gi|56695449|ref|YP_165797.1| K+-dependent Na+/Ca+ exchanger related-protein [Ruegeria pomeroyi DSS-3]
MEYLSIAAGLIGLFLGGEALVRGSVGLAQRLGLPPLLIGLTVVGFGTSTPELLVSVDAALRGVPDIALGN
ILGSNIANILLIGGITSLIWPIRGKPVGLWRDLTVMILATLALTPILLGGQVIRVVGLVLLLSLVAYLVW
SYRQAGGPCAEDTETDLPDVPARPFVAPALIGAGLLGLMIGARLLVDGAVSVAQGLGVSDAFIGLTIVAV
GTSLPELATSVIAAYRRQSEIAVGNIVGSNIFNVLGILGATAVIAPIPVASRFALFDLPVALAAAVTFSV
LLLWRAGVSRGAGVLLLLAYAAYVWAAQG
>gi|56695450|ref|YP_165798.1| hypothetical protein SPO0536 [Ruegeria pomeroyi DSS-3]
MTPLAHILALPVRAYRLIFSPWVGFNCRYQPTCSAYALEALEKHGALRGSWLAARRIGRCHPLGSDGYDP
VPEPKDRKPPHSPAG
>gi|56695451|ref|YP_165799.1| ribonuclease P protein component [Ruegeria pomeroyi DSS-3]
MTPPEAPTDGTASPGEMPPAVSVCASSGISVLRKRSDFLKAARARRQGAGSMMVQARKRDAGEAEGIRVG
FTCSKKVGNAVARNRAKRRLREAARLVLPDMGRPGWDYVLIGRPSDTASRPFDGLLDDLRRALRKLHAPK
P
>gi|161598434|ref|YP_165800.2| 50S ribosomal protein L34 [Ruegeria pomeroyi DSS-3]
MKRTYQPSNLVRKRRHGFRARMATKAGRKILNARRARGRKELSA
>gi|56695453|ref|YP_165801.1| hypothetical protein SPO0539 [Ruegeria pomeroyi DSS-3]
MAAWVCILGQMKPDPETKPDPMRQTAQPAPQRLLRHLPLIVIVLIAVIGAITLRDYLSFDTLAANRQALL
AYREAHYAALAAIFVATYVLIVAFSLPGAAVASMTGGFLFGLAVGTVLNVVAATIGAVAIFLAARAGLGA
MLTARLEASEGTVKRLKEGLRRNEIEVLFLLRLVPAVPFFAANLIPALVGVKLRNYVLTTALGIVPGAIV
FTWIGVGLGGVFDRGESPDLSLFREPFVIGPILGLCLLAALPIAIKALRGKPEGE
>gi|56695454|ref|YP_165802.1| mercuric reductase, putative [Ruegeria pomeroyi DSS-3]
MERIETDLLVIGAGSGGLSVAAGASQMGARVVLLEGHEMGGDCLNYGCVPSKALIASAKAAHARMTDAGL
GVAGQEPQVDFAAVKDHVAAVIAQIAPVDSQDRFEGLGVRVIREYGQFVSRTEVQAGAHLIAARRIVIAT
GSTPLIPPIPGLDSVPYLTNEILFDLRQRPDHLLIIGGGPIGLEMAQAHVRLGCKVTVIEAARALNREDP
EAAALVLTRLRAEGVEIAEDTAAAQIRGRAGAIEVVSAEGRIFAGSHLLVAVGRKASTDRLNLDAAGVET
TRTGIRVDASLRTSNRRVYAIGDVAGGLQFTHVAGYQAGVILRSALFGLPSKARTDHIPRATYTDPELAQ
IGLTEAEARDRHGDRVEVARFDYLHNDRAIAEGRTEGFIKVMVVRGRPVGVTIVGHQAGEHANLWSLALA
NNLKMSQVAAMVSPYPTIGEISKRAAGAYFSPRLFENQSVKRVVGLVQRWLP
>gi|56695455|ref|YP_165803.1| sensor histidine kinase [Ruegeria pomeroyi DSS-3]
MLNSLSGRFLILTVAFVMLAEVLIFVPSIARFRQDFLQNRLERAQIASLALLADDMLATDLETELLENAG
VYNVVLRRDEVRQLMLSSPIPGQIGQSYDLRQASPWILMRDALLRFFMSENEVIRVIGEPVKEAGLLIEV
TMDSQPLRMAMIDYGARILLLSLVISIITAFFLFLAVRAILVRPIRGVVDYMQRYARAPEDVRGIITPNS
GVTELREAEEALQMLQRQLTQALRQRERLAQLGGAVAKVSHDLRNILTSAQLFTDRIETSEDPLVRRMAP
KLVNSITRAVSLCESTLAFGRAEEPSPMLTMVRLHMVAEDVVASERLALGEGAIEIVNEVPETLSARADP
EQLFRVVMNLVRNARQALEATGQAGLVAVSGHETEADWVIEVRDTGPGLPLKARENLFTPFQGGVRKGGS
GLGLAISAELVRGHGGALVLKDSGPSGTAFEIRLPKGGETF
>gi|56695456|ref|YP_165804.1| hypothetical protein SPO0543 [Ruegeria pomeroyi DSS-3]
MNTAQPDFDLIVAGAGMVGMSAALYAQMDGLKVALCDPNPPGSGTTYGSACTIATYACIPVNSPAIFAAL
PYLLTSKDSPLSFNLLHGLKNPCWMLSFLANCRAARVRRITEALGRFLADADAGLDPLIMAAGAEDLIVS
NDCLYVWSTRAGYEGARASNALRRAQGVRFEELGPDEVRAMEPNLKQPIHRGLHFKGARHVTSPQALVGR
MQHRFETLGGTYLPARVERCDPDEGGVTVRLNDGGTLRAGHFALTAGARSRQIAGTGAEGLPLGTERGYH
ILYRDHASLVSRPVGWAEAGFYATPMAQGLRIAGTVEINAIDAPFNTKRTDYLQRKSHEMFGQLGAPDET
WLGHRPTMPDSLPVIGPSPSSDRVIFAFGHQHIGLTLGGLTGKVVADLAQQRSPTCNLGDFAPQRFT
>gi|56695457|ref|YP_165805.1| aminomethyl transferase family protein [Ruegeria pomeroyi DSS-3]
MKQVRVAVIGGGVVGVSVLYHLARLGWTDCCLLERTQLTAGSTWHAAGLLPLYYPNQTMSLINKHSMQLY
ARLQAETGQPSGFHQCGQLRLATDHDRLDEYRAYLSFARYLGIDCALITREEAQKLWPLADLGDVIAALY
HPGDGHIAPADLTQAMATGARGMGAKIHLNTEATAISRTASGEWLISTPNGDFLAEHVVTATGNYARQTG
AMVGLNVPSIPVMHQYVVTETIKEFADHNRAGRPEMPVLRDDKSRFYLRQENDGLILGPYEPNPKSWAIN
GVPPGFGAELMTPDYDSLEPFIEGTLRRVSSFAAAGIRTVVNGPIAHTPDAFPLVGPAPGLQNYWLAEGM
VAGICYGGGVGRYLAEWITEGAPTIDMWPVDPRRFNGHAGKNHTRLKNEETYGHIFDIHYPNLEMPAARP
GKTSPCYDRLTRAGAVWGVAGGWERARWFDAEGNRTPETLTFRRSNAFEAIGAECRAIRNAVGLIDFTSF
AKWEVSGAGAMAFLDRALANAMPKRDGRVTLAHALDENGRFCAEFTVARLAEDRFYICGPAFSEVHDDHV
LRSRLRPADAATLTNVSMGWGCFTVAGPKSRELLSRIVDAPLENDSFKWFDLHEGEVGWATDVRLMRVNY
CGELGWELHHPIAFQHHILDQLEQAGADLGLRHVGMRALDSLRIEKSYRAVAQELTTQNTLHELGLGRFI
ATGKTGFIGAQAVAERVGKESVKLVTLEVDCEAGGVEPAMNQAVRCGDKVIALTTSGAYGHFLGKHLAMA
ILPLDHAAEGTRLSVEILDERYDAVVIADSPHDPGNLRPRA
>gi|56695458|ref|YP_165806.1| excinuclease ABC subunit B [Ruegeria pomeroyi DSS-3]
MPDAHSDKSAALMHAPAPDVKARPKLEGGRRFVMQTEFQPAGDQPTAIAELTQGVNEGERNQVLLGATGT
GKTFTMAKVIEETQRPAIILAPNKTLAAQLYGEFKGFFPDNAVEYFVSFYDYYQPEAYVARSDTYIEKES
QINEQIDRMRHSATRALLERDDVIIIASVSCIYGIGSVETYGAMTQDLKVGGEYDQRQIMADLVAQQYKR
NDQAFQRGSFRVRGDSLEVWPAHLEDRAWKLSFFGEELEAITEFDPLTGQKTDTFDQIRVYANSHYVTPK
PTMQQAIIGIKQELRQRLDQLVGEGKLLEAQRLEQRTNFDLEMLEATGVCNGIENYSRYLTGRAPGEPPP
TLFEFIPDHAIVFADESHVSVPQIGGMYRGDYRRKFTLAEHGFRLPSCMDNRPLKFEEWDAMRPQSVFVS
ATPAAWEMEQSGGVFTEQVIRPTGLLDPQVEIRPVEMQVDDLLDEVRKMADQGFRTLVTTLTKRMAEDLT
EYLHEQGIKVRYMHSDIDTLERIEILRDLRLGAFDVLVGINLLREGLDIPECGLVAILDADKEGFLRSET
SLIQTIGRAARNAEGRVIMYADRITGSMERALGETDRRRAKQIAYNEEHGITPATVKKNVEDVLAGLYKG
DTDMSRVTAKIDKPLHGGNLEAVLDGLRADMRKAAENLEFEEAARLRDEVKRLEAVDLAVSDDPMARQWA
VESASEQAVKSRGRSTAGRPGQRGGNVKRRGR
>gi|56695459|ref|YP_165807.1| hypothetical protein SPO0546 [Ruegeria pomeroyi DSS-3]
MFSHLRFFAHAGAVSRACRRGCNKELLRMKYTLSLHSRSSPFRIVLEINGDPDSDSFHWTEIEPDHEKPF
FMAASRSLGYFDNSAKHGEIKRAIFKGSGVATDKRPPVLELQICRLPEFKIRDFEHCWQGNILRWADSPN
YQKQSLQRFTWRAEAV
>gi|56695460|ref|YP_165808.1| hypothetical protein SPO0547 [Ruegeria pomeroyi DSS-3]
MPNYRRARIAGASYFFTLALADRSSTLLTERINDLRHAYALTIREAPIVCEAFVVLPDHLHAVWTLPPGD
SAFSERWRKIKHRFSRAVGRTAHPTHRSESKRAKRECGIWQRRFWEHLIRDEDDFRRHVEYCWGNPVKHG
LVDRAVDWPFSTIHRDIRLGRVDAQWAGRPTEGAFGE
>gi|56695461|ref|YP_165809.1| hypothetical protein SPO0548 [Ruegeria pomeroyi DSS-3]
MRIAVFAISLAYVLLYGWAWVGTVNASMDAAGRGMALGFLTVGIGATAIFVIPALVLAIANRAPKWALGL
SLAPAALLFLVVMTGVI
>gi|56695462|ref|YP_165810.1| hypothetical protein SPO0549 [Ruegeria pomeroyi DSS-3]
MDHARRGDRPMSRLDSMLRRLTAQRDGLNWAALQISGIPGEVLDMGLGNGRTYDHLREILPGRRIRVMDR
VLQCHPSCTPPEADFLMGEAEPMLERLAAEGAPIVLAHYDFGMGIKADDVAEAARLSPLIARVMVPGGLI
ISGQPLVGFTPVAAPDSIPPERYLFYRA
>gi|56695463|ref|YP_165811.1| hypothetical protein SPO0550 [Ruegeria pomeroyi DSS-3]
MTPDWTPLDAELARWAAEGLTLPLWWRDDDAVSTTPQLDRLTALAEDLDLPVHLAVIPAGADTALADHVT
AHPHLVPVVHGWAHQNHVPATEKKAEFRAHRPLSEILTEAGQGKARLQALFGDALRPMFVPPWNRIAPEV
TAGLPPLGYRALSTATPRRSPMAAPGLAQVNTHLDPIDWRGSRGLVAPQTLIAQTATLLADRREGRADAT
EPFGILTHHLVHDDEIWQFSGALLARLLAGPCQPWTMPAEETDR
>gi|56695464|ref|YP_165812.1| hypothetical protein SPO0551 [Ruegeria pomeroyi DSS-3]
MKVMIVVTHLLGTGHLSRALTLGRAFAATGHQVRLVSGGMPAPQLDPAGLELVQLPPLRSDGVDFARLLT
ETGAEADAGFHTTRQAALLEALTAFAPDVLITELYPFGRRSLKTEFRALLAAARALPRPPLVLSSIRDIL
APPSKPAKAEEADQVIAEAYDAVLVHSDPKVTRLEASWPVSAALADKLRYTGYVAPPPAEPHPERAGAGE
ILVSAGGGAVGGPLFRVALEAARRMPSHRWRLLVGGTQAGAEVAALQEQASNAPVTVEPARPDFRAMLTH
AAASVSMCGYNTALDLLQARTPAVLIPFDAGKEVEQGLRARALTALPGFATVTSAELTPETLMRALQQVM
RDPRRDTTTLRFDGAAETVRMVEMMEAAR
>gi|56695465|ref|YP_165813.1| phosphoglycerate mutase family protein [Ruegeria pomeroyi DSS-3]
MRRLALLRHGHTDWNRAGRIQGRSDIPLDDAARHDLGALALPAPWDRATLWSSPLSRAVETAKLVAGHTP
RNAPALTEMNWGDWEGQRGRDLLDTPGSGYRHIEDWGWDFRPPAGESPAEVWTRIDPWLAGLTGDSVAVC
HIGIMRVILARAHGWNFDGIPPFKVKRNRLFVVSLDPLAPSGEPVRLIPREARP
>gi|56695466|ref|YP_165814.1| glycosyltransferase, group 1 [Ruegeria pomeroyi DSS-3]
MARIAFYAPMKSPDSPVPSGDRELARSLRTMIAGRGVPVDLVSEFKSLDKQGDAGAQARLRAGAAVEVRR
LIRDLPGDCALWVTYHNYYKAPDLIGPAVCAARAIPYVQIESTRATSRLTGPWAGFAQAAHDACDAARVI
FYLTANDLITLERERFGTQALVELPPFLPENTLPSRTTADGPMLSAGMMRPGDKLASYRLIAETLAHLDG
AWQLDIAGDGPARPEVAALMAPFGARVRFLGQLDRAGLQAAYGRSSLFFWPGVNEAFGMVYLEAQAAGLP
VVAQDRPGVRDVLLPGPAYPAPEAGPEALAEMIDRLRADPGMRQRIGSEARDRIATRHLPTAAAAVFWGA
VTPLMETAS
>gi|56695467|ref|YP_165815.1| glycosyl transferase, group 1 family protein [Ruegeria pomeroyi DSS-3]
MTSDSPKLAVVVKGWPRLSETFIAQELVALEEAGHDFDIWSLRHPTDVKRHPLHERLRARVRYLPEYLWQ
EPERVWRARAVAQALPGYAEAYRAWRADLARDRTKNRIRRFGQACVMAAELPASTRGLYAHFLHTPASVA
RYAAIMRGLPWSFSAHAKDIWTSPDWEKAEKLSAASHGAAFGATCTAVGATHLRGLTDDPGRVDLVYHGL
DLARFPDPPARSPRAASAPLAMLSVGRLVEKKGFDRLIAGFGLLPPGLRWHWTHIGGGGDRAALTAQAEA
LGIAQQITWRGACDQPEVIAAMRAADLFVLPSRVAADGDRDGLPNVLMEAASQLLPILSTPVSAIPEFIT
DGAHGTLSDDAPEALARAIATLAADPERAAGMAAAARVRLLSEFTMAPGIAHLSNRLTALCAGG
>gi|56695468|ref|YP_165816.1| hypothetical protein SPO0555 [Ruegeria pomeroyi DSS-3]
MQGESRTVDTGRAARVMLYSHDTFGLGHLRRSRALAAAITQADPSASALILTGSPVAGRFTFPRRVDHVR
LPGVTKRADGSYASQTMGMGIDEVTDLRSGLIRGAAERYDPDILIVDKEPTGFRGELLPTLDCLQRRGRA
RLVLGLRDVLDEPEVLAAEWARKGAVAATERFYDEIWVYGLRSVYDPTAGLPLSPEAQARMHWTGYLRRD
LGPVGTPPHQPYVLITPGGGGDGEAMVNLVLSAYEQDPTLSPRAVLVYGPFLSGDTRAEFERRVAALNGR
VTAVGFESEIETLFAGAAGVVCMGGYNTFCEVLSFDQRAVIVPRTVPRLEQWIRASRAEELGLVRMLEES
RDGLTPETMIQAIRNLPNQPLPSQAIGEGLLDGLDHVTRRVRALLSKTSHQAAE
>gi|56695469|ref|YP_165817.1| UDP-glucose/GDP-mannose dehydrogenase family protein [Ruegeria pomeroyi DSS-3]
MKHARSGTQAMSRQTDQDRIAVLGLGYVGLPLALGLARAGFQTLGFDTDAAHITALGRGHDRNGEVSERS
LAETRARFSCDPADLAGCTVYIIGVPTPITDAKTPDLEPLKGACRMIAPHLVPGDMVIVESTVYPGVTEE
ICGPVLAEGSGLELYSQIKLAYSPERVNPGDAEHSMENVVKIVSAQDAETLDRVAAIYAPVVKAGVHRAS
SIRTAEAAKVIENTQRDLNIALVNEFSLIFSRLGLDTLEVLEAAGTKWNFLPFKPGLVGGHCIGVDPYYL
TYRAEQSGYHPEVILAGRRINDNMGRHVARQLIKALIARRIDPGRARVLVMGFTFKENCADIRNTRVADI
LSELAEYSVATEVCDPWVDPEAMEQEYGVTPVSEPTTGAYDAIVVAVAHRQFVELGAAAIRAFGLPGAVL
YDIKGIFSKSDTDLRL
>gi|56695470|ref|YP_165818.1| mechanosensitive ion channel family protein [Ruegeria pomeroyi DSS-3]
MPSGQALRISRTCRLNAHPRFDRLWRSPTPIQVSAMIVAFRLFLACLGLFLCLSSPLAAQVSLYSGIAGT
SDESAGGDLAEAIRAASEAGASVIVIDSAGRVAAAGTEAGAVETARVDPMGEASQLMKAQEKVSDFIGAL
RSRLEALPYSIFEVQYILRQTSPDGRIATYAEVLAINLVLLLIGRWMSIEIYGKRIARKHVVSRIREAPR
GYREKMPFLVFRFVMGVGATLFAMVFAFIIGFLIFGPMQDLSIQFTVTAIFTAYFLARTASDLWRMVLSP
YLSQYRLPPFSDRDAKRLYLWASLLATYDISSELFSTWVADFGLNYNVYAMVYGVLTGVGALGNVLMVLF
NGRAISNAIRGGRTKDEVSWILRLVSVAWAPVVLFYMVFGWLQLAFDLVLERPVHIPLMAGTYGIFMSVV
VAYGAMNYLLERYFDRTRQVKELNAALAEAEAAEDLSMTGVSAQRHHIATFEDLARRVAGILAFVVGTYA
LVLIWNPEMDWTGDLPIDRALDVMVIIFLGYIVFHFFRIWIDSKIAEETVDVPEGELGDEGGGTSASRLA
TLLPLFRGAILAVVVVSIVLIALMEVGINVSPLFAGAGVVGLAVGFGSQTLVRDIFSGAFFLVDDAFRKG
EYIDIGDVKGTVEKISVRSFQLRHHLGALHTIPFGEIKVLTNFSRDWVIMKLPLRVTYDTDVEKVRKLIK
NLGQELLSDPVIGDNFIQPLKSQGVIEMQDSAMIIRVKFMTKPGDQWLVRKRVYQDIRELFAREGIKFAH
REVTVRLADGQEAAKMTPQQREAVTGAVQAAIDEDVLDDMMDDDR
>gi|56695471|ref|YP_165819.1| oligopeptide ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MTQLPDGRYVDDAPYDPQQSIQQLERRDLDAPNWLLVWRKFRTHKLGLISGIFLLLSYLLLPFMGFIAPY
SPNYRNADHLYAPPQAVRWVHEGDFLGPFIYPITAEADLETFQWTFVPDTENPQRIRFFCEGDSYKLAGL
IESDTHLFCAPEGATLFLWGSDRLGRDVFSRILYGAQLSLTVGLIGISVSFVLGIFFGSLAGYLGGKTDW
VINRVIEILRSLPELPLWLALSAAVPSNWSPVAVFFIISVILGILDWPGLARSVRAKFLSLREEEYVRAA
EMMGAGKGRVIRKHLLPNFMSHLIASATLSIPAMILGETALSFLGLGLRAPAVSWGVMLNDAQNLASIEL
YPWTAIPMLPIVVVVLAFNFLGDGLRDSLDPYS
>gi|56695472|ref|YP_165820.1| oligopeptide ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MAILRYAFYRFGTMLMTLLVVSVLVFAIINLPPGDYLSNQIAELKASGQSAGVAKAEFLRKEYALDRPVW
QQYMIWMGFMPGPHGFSGLIQGNFGWSFEFDRPVSEIVGDSLWLTVLVNMAAIVFVYATALPLGVIAAAK
ARTWADYTSAFVGYLGLATPNFLLALILYYYGRKYLDIPIGGLMDPAFEGQPMSWAKIQSVLVHLIVPTI
VIGTAGASAMMQRLRANMLDELGKPYVETAIAKGMAPSRMLAKYPLRVAFNPFVADIGNLLPSMVSGSVL
VSVVMGLQTIGPTLLTALKSQDMFLSGFVLMFVALLTLIGTMISDILLVMLDPRIRYEGRDA
>gi|56695473|ref|YP_165821.1| oligopeptide ABC transporter, periplasmic oligopeptide-binding protein [Ruegeria pomeroyi DSS-3]
MLELPRRAFALALTMVLAGVLPLRADTVPTLQESVFWGAEVKSGDLPPIDQRIPEEPLIVDLAAKGREFG
TPGGVMRTMITRSKDIRQMVVYGYARLVGYDENYNLVPDLLKSYEVEEDRRFTLHLRKGHKWSDGAPFTS
ADFEYWWKDVANNPLLSPAGPPDFLLIEGQPPRVSFPDATTVMFEWDKPNPNFLQSLAQARPPFIYRPAH
FLKQFHQDYADTAQLAAAVEENRVKSWAALHNKLDNMYQFDNAQLPTLQPWINASEGKKIRHNFVRNPYY
HRIDTRGVQLPYIDIIEMEIVAPGLVAAKSNAGEVDLQGRGLDFRDASILKKGEADGGYKTYLWQTGVAS
QIAIYPNLNHNDDVWRALLRDARLRRALSLAIDRDAINRALYFKLAKPGAMAVLPASPFFKQEHRDAWAA
YDPARASALLDEVGLDKRDGAGIRLLPDGRPMELVIETAGERQEVENALQIITDTWREIGVKLVMRPLDR
DILRNRVFAGTTMASVWFGWDNGLPQAYTSPAYLAPTDQVFLAWPKWGQHYQTAGQVGEAPDLPEAQRLM
ELLHDWERANNDQDRAAAWSEMLAIHADQIYGIGILAEAPQPIVVSARMRNVPKKGMWAWDPGAHFGVHR
MDEFFIQD
>gi|56695474|ref|YP_165822.1| hypothetical protein SPO0562 [Ruegeria pomeroyi DSS-3]
MREMQIMSQPEQSRLDLFIDRMVSQRACLEHAIAQTAGLSGPVYELGLGNGRTYHHLRQHVQGREIYVFE
RAVASHPDSTPPEAQLILGDIRETLPATLERFGATASLVHADLGGHNREKNDRFARLISPLIEPHLAQGG
LMVSSDRMYFEGLEELPLPPGAVVGRCFIYRRG
>gi|56695475|ref|YP_165823.1| glutathione S-transferase, putative [Ruegeria pomeroyi DSS-3]
MLFYDCSTAPNPRRARMFIAEKGVEVESRDISIAKGEQLQPAFRAVNSRATIPVLVTDEGTVLTENLGIA
AYLEARFPEPPLMGRSADEKGLVLMWNAIAEQQGGAPVADALRNGHPAFKDRAIPGPANHAQIPELAQRG
VARVAQFFDLLEERLNESPFIACDHFTLADISTFVFVDFARVIKMRVPEGNTATRAWYEAIKARPSAQI
>gi|56695476|ref|YP_165824.1| aminomethyl transferase family protein [Ruegeria pomeroyi DSS-3]
MKSHYRVVVIGGGVVGASVLYHLAKFGWTDVVMLERRRLASGSSWHAAGGIHALNADPNMAALQAYTIDL
LSEIEKESGQNIGLHMTGGLTLAGTPERWEWLQANYRIFQSIGIDDCELLTPQEAQRRCPIMSTDGVLGA
MWADREGYIDTTGTVQAYATAARKRGAEYYEDTKVEQLIQTADGWQVVTDKGTITCEHVVNAAGLWAKQV
GRMAGVELPVSPLKHHYLITDTVPEVAAAEFEMPMTVDLEGFTYMRQDQKGILVGIYEINHEHWAMDGAP
WNYGEELFQEQLDRIENELMLGFARYPSIQDVGIKTWVNGAFTFSPDGNPLVGPVPGKRGYWSACAVMAG
FLQGGGVGKTLAEWMIHGEPEADAWSMDVARYGDYAQNKRYIRETTGQFYSRRFVMSYPNEQLPAGRPLK
MAPAHDAMTAAGCRWGVSWDLEVPLYFAPSEDFVENLTLKRSNAHPIVAEECRVIREGVGLLDITGFSRF
EVSGPNAEAWLDKLFATKLPAPGRARLAVMLSETGRLKGDLTLLNWGDGTWWIMGSYYLRAWHMRWFNDH
LDDGVSVRDLGEEICGFGLVGPKSRTVIEKLAEQDISELKFMGCGSFDIGLVRARVARMSVTGEMGYEIN
CRYGDHIALRRMLLEAGAGEDICEVGFNALLSTRIEKSFGIWSAEFTQDRTPGMTAMDRWIAWDKGDFIG
RDAAIAERDGNGPARVQVTLEVDAADADASGYEPVWADGVQIGFVTSGAYGHYTGKSLAMALVDRDRAHP
GTSVSVHVVGVERPATIIAPSPYDPDGKAMRG
>gi|56695477|ref|YP_165825.1| trimethylamine methyltransferase family protein [Ruegeria pomeroyi DSS-3]
MSAGRRGRRARTEAPASARKVDYRNLRNPFPPMAAFSEDRIEALHEASLSVLEELGIKVLHPGARDLYRQ
GGARIDGEMVHIGREMVEAALASAPKSIRMRGAVPDRDVVLELGRMAFQPGAGCPHATDLARGRRPGTIA
DFRELVQITQSFDVLHMVPPLVEAQDVPMHLRHMAMTEVELTQSDKVPFLYSRGTPQVMDGFEMIRDFRG
LSDAEFRAQSWCYTIINTNSPRTIDMPMAQGLIDFARHGQMAIITPFTLMGAMAPVTVAGAMTLSHAEAL
AAITLSQLAQPGAPVCYGTFTSNVDMKSGAPAFGTPEHFTASLVAGQLARRIGLPWRCAGGSAANINDAQ
AANETQFGLWGCLLAGATVTIHAAGWLEGGLTVSYEKIITDLEVLQMVAELCAGTPATDADIALDALREV
PPMGHFFGAAHTMARYQTQFYEPLVGDWSNFGQWSERGAVDANHRATGIWRGIVDNFEPPPMDPDRVAAL
QDFIARRTAEGGAPPES
>gi|56695478|ref|YP_165826.1| TetR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MGNIKVTRDDWLNVAMDVLVSDGVEQVKVMNLAERMAVSRSSFYWYFKSRQDLLDALLAKWQATNTAGLI
AQTELPAQTITGAVCNLFHCVVDPALFDTALDFAVRDWARRSGKVRRLLDLSDSRRLEALTAMFLRYDYS
QIEAETRARVLYYMQIGYDLAQMNEPIDQRLSFVRHYLFVFTGVQARDEEVAAFSAFARGFWEGRRP
>gi|56695479|ref|YP_165827.1| oxidoreductase, FAD-binding [Ruegeria pomeroyi DSS-3]
MNSPDAIIIGTGVIGAAIAFEMAKAGWKTLSLDRNAQVGHGSTAGSCAIIRMHYSTFEGTALAWEGYHYW
RDWADYLGLPEGADLARFRQTGCLVMKTVANDQMVKHIRCSAELGIPFEEWSAEEVLARLPIYALDSYAP
ARRLEDPEFGKPNGGRMGGAVFWPNGGYVTDPALSAQNLMDAARLHGAALRNRAEVVEILQAGGRVAGVR
LASGEEIHAPVVINVAGPGSAIVNRMAGVTGDMTIQTRPLRQEVVHVPAPEGFDFETQGTIVSDSDIACY
CRPEQGNHILIGSEDPACDPHQWCKDDLDFDRNFTDQWTTQAMRYAQRVPSLGIPSRMRGVVDLYDASTD
WIPIYDRSSLPGFYMACGTSGNQYKNAPIAGKMMAALVRYCEEGGDHDTAPLEFELPYIGRRIDVGFYSR
KRPVNQESSFSVLG
>gi|56695480|ref|YP_165828.1| 2-oxoacid ferredoxin oxidoreductase [Ruegeria pomeroyi DSS-3]
MTHPAPALRSYALEDRYNQTTGRVFLTGTQALVRIMMDQARRDRAAGLNTAGFVSGYRGSPLGGLDLEMW
RAKTRLEQDRITFMPAVNEDLGATAVLGAQQAVLDPDCQHEGIFSMWYGKGPGVDRSGDALKHGNAYGSA
PKGGVLVVAGDDHGCVSSSMPHQSDVAFMAWFMPTLNPASVEEYLEYGEYGLALSRFSGTWVGFKAISET
VESGRSVELRPDRQFTLPQIDLPAGGLHVRRADLPSPEIETRIQAKLRAVRAFAEENPIDRRIYDLPNAR
FGFVTTGKGHLDLMEALRLLGLDEAKCRALGIDIYKVGIVWPLARRNALRFVRGKQEVLVVEEKRGIIES
QFKEYFYDWPGDKPHRMVGKYDEQGEPLIPWTGELSPLMLAPVVAARLDAFFPDENLPARARALTETPPP
VIAVPGATRTPYFCSGCPHNTSTKVPEGSRANSGIGCHVMASWMNRDTDGYAQMGGEGVPHVVASKFNGG
KHIFQNLGEGTWYHSGSLAIRQAVAAGTNITYKILYNDAVAMTGGQPVDGPVSVSGIAQTCRAEGVQRIA
LISDDIEKFARADFPAGTTFHDRAELMVVQKELREIKGVTVLIYEQTCATEKRRRRKRGKIEDPKRFAWI
NDLVCEGCGDCSVASNCLSVEPRETPLGRKRKINLSSCNKDFSCLNGFCPSFVTVEGATRRKRTITLELD
QLESGLPEPTLPALSDPFDLLVTGVGGTGVVTVGALITMAAHLEGLGASVLDFTGFAQKFGTVLSYIRLG
AKPDTLHQVRIDTGGADAVIGCDMVVSSAPKASAHYRNGTKVVLNRAEMPTGDLVLHRDAQLKIDTREAA
IRAVVGTENVSGFDANQTAEQLLGDAVFANVMMLGYAWQQGLVPVSRSALAQAILLNGVAVEKNRLAFAA
GRALAADPARLDVESASPEAEETLDQMLARRAAFLTDYQNAAYATRFTNRIAALRQALPEASEALIAEAA
RNLFRFMASKDEYEVARLMTADHFQQDLQAQFEGDVKLTYHLAPPLLAHRKDARGRPVKRGFGPWLRPVL
SLLARAKPLRGTALNPFGYHSEARLHRETLAWYLALLDRMQQDCTATNEADWQSVLTLTGEIRGYGPVRA
EAAGRIRAEIASRLDRG
>gi|56695481|ref|YP_165829.1| AsnC family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MQLDDRDRRILTLLQQDSRISNADLAEAVGMSASALWRRVRAFEEAGVITRYGAVVDPGAMGLDFEAIVH
VHLTRHDPDGIVAFIRAIETAPEVQECYATTGQADYHLRVLCPDLAAYNIFLERFLFRLPAVASAQTNVV
LRTIKRNRPVTI
>gi|56695482|ref|YP_165830.1| hypothetical protein SPO0570 [Ruegeria pomeroyi DSS-3]
MVKARLFLCVRSVCTAALLMTTSLAAPALAETDPLDAPMQEITLGPDDTIRGIVGQYLRDPDLWPAILAL
NNIASPAALQPGTVLRLPVQQVFAADAALVSSLSAIQKANAEGARIFAPTQIGEAIRNRDEAVQKREVGD
WRQVVGFAGVATDIAHEALELSLTQRDRSAEAVVSDVQGDVEGRAPVEPSWSDRQLNDILVEFERVRTLS
ASTTQITFRDLSRLRLNPNSNATIQRMRSDPLTGGEVTKVSLAEGDFYALLNQLSEKTTFEIEVPGIETT
TNSADFWIKNDTTGARFVNYDQPGLEIEENGRKIDVGQGEGVVITGAGAQRVTVLNSPRLSAPALGEILY
TRTADLAWDMFEGAEAYWLEVAADPGFNQMQVSEWGIRDTGLQVELPPARYHWRVAALDRLGLPGAWSTA
QEFTIRLDDTPPFLTVLSPAPDTIVTTPEIEVLGATELDAALILNGVALEQGADGSFVTRVALVPGRNMI
SVLATDPAGNNSRRDQAVIYRPAAAIEISLSQGMPRVDEALATRSAQLSVTANSTAEPGAPVVVRNAAGA
IALRAEVAPGGAISFTVPVDAAPRSYRIEVLAPDGSVEGALEFQALRDELAPELTLDLPPPRATAETALA
LSGLAEDAVRLELNGSDLPLVEGRFDLSVTLSPGVNTFDLVATDAVGNVTAKRLETLLDIDPPEIASVVL
NRPQGDGGPIEIEALASDASGLRQAAPFLIRIGAEEVEGFLRCDSTNGICRVSLPPQDGALELVELMIED
YAGNAAFE
>gi|56695483|ref|YP_165831.1| PKD domain-containing protein [Ruegeria pomeroyi DSS-3]
MEERNMALARNWTAATLAVALLAIGSGTGAQTVADEGLLVVYGPQAPSREGDTDRREQVFFSVPASLAER
VYVRVFDPETGGEGDFTYGGSADSETTFRLFGGDGAYSDADRPEPVADGAREPRLIPYDPVTQPGKMIRE
QVWGHDLATDGRWVSLAAVRARQGEIVGDRAYFRIDVQGSRGNDGNGYSLGVSLARDRDRAPEGLEMFSY
QPTVRWSAGKPATRVDFTRTAPGPLTVQSFDGANGELALITDYRDLGLRISGQDFWTSDEVATDETNLAI
SLLGGFETPNDVTLAVFDAEGNPVPLSMPPYRAVVPPRPVARGTGQPLADCRSVAFDASGSTGRTPLSYL
WEFDDGARSTDPVVAHRYSEPGRYTARLSLLEPGSRPGRGDRIEVPVHVRNAPAAVAGSDIVVAPGQVVD
FDGSASQPSDSPITGYRWTFGDGGAAQGPRAQHVYDQPGQYRAVLRVQDDAVHPCNFGTAVRRVVVNFAP
VAEAGTDQSAIVGQAVTLSGAASYDVDGAILDYRWSMGDGTVLSGETVTHRYEQSGSYQVLLTVTDDSGV
VNKIATDGARIEVNAPPEPRFTIPDRPVSVSEVAVLDASASTDADGQILSYIWDFGDGAMGEGPVASYAW
TRAGEFSVTLTVEDDSATASALQSITRIVRVDAAPVADAGPDQYVTATEVRFDGGGSVDPDGRVTDWQWD
FGDGATASGQSVTHAYLRPGRYEVALIVRDDSGAPLNTHRDTMWLTINTAPIADAGPPQVVAPGEEFLLS
GGASVDPDGAISDYLWTFPDGQVKQGQRVSHVLDEPGLHRIRLTVADNFAGGAAEDEAEVLITVNAAPVA
VAGRDLLIAPGDTVVFDAGQSFDPDGRLTSYRWEFEDLGAPLEAQRVERAFDAPGVWSAQLVVADDSGVL
NATAADDVTIRVNHPPVAEAGAPVITDQLHVTFDGSGSKDGDGDPLIHRWDFGDGSPPVYGETVTHVFPR
AGIFPVTLRVDDGTGLSNARAIDATAVTIQARPMADAGGNRDVCSGEPILFDASASADPDGGLLAYEWDF
GDGSGSDLINPTKTYELPGVYPVTLKVRNGTGTEHGTAVDRIAALVREGPIADAGPDMTVCSNAQVRFDG
SGSSDADGAVNAFTWTFGDGGSGSGATPQHIFRTPGTYSVTLTITGDARGACSPLDTDVSQVTVIAAPEL
KVLGQGRAAAGIPASFSAGLDQLGGASPEGFSWSISDGTTYEGRDIEHVFAEPGDYLVTLRSRLSGGTEA
CSELEVQRRIIVNAAPEPVIDAPLRVSVGQSVRFDAGGSSDSDGAIARFAWAFGDGAGAEGVQAVHRYET
PGSYEVSLTVTDDAGVANSQITRRQQIEVAPSPVAGLTARGAVCPGVSLPWAVSPGGETAVGWAFGDGTV
AEGAETRHGFDRPGLMPVRVELDDGRDLPGSRRAEEIYVRVNAQPTALAGPDRVVCPGEVVVFDAGGSGD
VDGDLTSWRWTFSDGVTLEGARVERVFDAAADLTVQLSVQDDSGAEGCDIGTDSARILVNGTPQVDAGPD
LTVPVGGAHDVVRFDAGAASDPDGHGLRLSWSFGDGTEATGAVVRHRFANPGSYTVTLRAQDSTGLVCGI
GRDTATVTAVARD
>gi|56695484|ref|YP_165832.1| adenylate/guanylate cyclase [Ruegeria pomeroyi DSS-3]
MRFPLRLKFFVFAVLLAMGPLALVGQNLTQLTRDELKSAANEDLTTVAAELRATFDNTFQGRWLTPLTVI
RNGVDSADLGVPQKISLLTLGLQELSQVVALQLSIEGSDLPIIVTNEGFATRLSEAGLNPVEALATSSEL
IKAIAGTGQYGRPVITRLEETGDWLATLALPLETRIAGRQVTMAARIDLGLLGETVRRHPFAQRGEITVV
DQAGRRVLTGTPELLDKRRIVASTLPLIVAGARADALEPYVRPDGTAMLGAYAFPDWFPWAVITELSEDN
AYAVVNAITRQILTVGLVGFAVAAAAALLFARQLTRPILMIGQVAQRVGEGDFSARVEDVRARDEIGDLA
ARFNRMIAHLGERVELMKFVSHSTMSAIQSAERTGMARGGQRRRVSVIFTDIRGYTEFSERVPPETVIEV
LNSYFDAQTDIVEHYKGDVDKFVGDALVAVFEGDGMEARAVACAVGITEAMARLLEENPEHGLHVGIGVA
SGEVVMGAMGARDRMDFTVLGSTVNLSARLCSKAAADQVLIDRETRDAAVLEDIVYEPLEPIALKGYAAP
VPAFAALRKAG
>gi|56695485|ref|YP_165833.1| hypothetical protein SPO0573 [Ruegeria pomeroyi DSS-3]
MFLPVTIGSLLLVLGLFQIKHMFADFFLQTPRMLSGRCQYWHLGRAQHAGVHAVGSVLLFLVVGAPVVFA
LVIAVVEWVVHFNIDYGKASYSDRKALQPNQAKYWHAMGFDQFLHQLTYLAMAWAWVEFAH
>gi|56695486|ref|YP_165834.1| ABC transporter, transmembrane ATP-binding protein, putative [Ruegeria pomeroyi DSS-3]
MSGRDSLGEGRRLRVWRPSCLRPILGVGAIERTLFRFIWKYSRRDQLILLMVTATLFPLLYLTLELPKRI
INDAIGAASSTIEVWGFTFDQVTYLGILCAAFLISVLAHGLMKMRINTMKGVMSERMLRRFRYLLITRVL
RFPQPYFERVSQGELVSMITAESEPMGGLMGDAISQPVLQAGQMITILSFLFLQSLWFGLAAVALIPLQA
WLIPRMQRQINLLNKKRIQEVRVLAAQIGENAAGAATLRSNAGWPWRMSMISYQLGRLFTIRFDIYQKKF
FMKFVNNFIGQLTPFLFYSIGGYLVLQGSVSLGALVAALAAYKDLSSPWKELLTYYNQTQDMSLRWEVIL
DRFAPPGMIDEDKFTGFPDERPRLIGDIVLDKVSVRDADGNLVLDDLDLTLPGGKVIGIAASSEEDRRAL
SELLTREVLPASGQVRIGEIALSDLHQMVVASRIGHATSRPVLFQGTFGDNVTMPVRVRPQGDSGEPGFH
AETLRAGNSADPYHSDWLEPGLAGFDDARALRDWWLKLVEGLGSGAALYRRGAEQVFAEADHPDLAARLV
ALRPVIQEAAERAGLAGQAHFFDPDHYNPALPVAENLLFASPRAPFTPEVLAGQTDFLEQIRQIGLDEPL
VRLTQDVIDMLRQIFGLDGTDHPLFRKMNLDVRTYETALELVEKTRDAGARALEDDQLASLLAVPFRISA
DQIGPAFSDQIKARILELRKSHSSELMRSLDDVFAPLDPGAFAPGLNVLENALFGKVSEVGGARSDELRK
LITDLLDEHGLRPQVIQLIYDLPVTLGGQNVPAIFAEPLAFTRATIKRPDILLLDRALASYDMQTQIAVY
RNLRALLPETTLIYLNDAFENPDVFDLYVEVQQGRIVTEEVPRQQEEEDSVASADLSRKVRTLEQTPLFS
GLDRRQLRLLAFGARWYSAKAGEVVFLKDDEPTDGAYMMIEGEAGLYLPREGQEDQLIVTVGPGRLVGEL
GLIRKEPRALSMVAATDITCLRIGEEEFLAVVENDAATAFKLLQVVAGYVSN
>gi|56695488|ref|YP_165835.1| acyl-CoA dehydrogenase [Ruegeria pomeroyi DSS-3]
MTCSSPFMTPERQAFRDTLAAFFATEVTPHVEEWEAAQAVPWELHQKLGALGVFGFGIPEEYGGLGFDDA
FMRCDYAELAFGCGASGVAAAVGGRMISLGPMVQFAPEPFRQDILPRIVRGEMNSALAITEPGGGSDVAN
LSTRAARVAGGWVLNGAKAYITGGMDAQWFVVGARTGGPGLAGISLFLIEADTPGFSRTPLGGKMGWHCS
TQAMLHFDDCHVPEAALIGPENKGFLAIMNNFNHERLAMVAGSLGMMRVCYRSALDWARERRTFGQRLIE
HQVIAHKFAEMSARIDMTEAYLERICWAMNQGLMPAAEIAKAKVQATKALEFVASEGMQIFGGAGYLTGN
PVERVWREVKVMAIGGGSEEILRDLAVRQMGLAGQ
>gi|56695487|ref|YP_165836.1| TetR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MPETLKPTQQDRRSRSTQAKVIRATITCLDRLGYAETTFARIQERAGVSRGAITHHFPTRQALVAATAME
LLSRALDPVERRAAQAASPEPVRDLITRAWGQVVNAAGGRAMVEILVACRTDAELYRLLETRLHDWDHQS
RASVARAYVGADQAADDAELLWSMTRNFLRGLVLHERFVTDPAYLARMVDRFAGMMESQLTPLTAKDAL
>gi|56695489|ref|YP_165837.1| hypothetical protein SPO0577 [Ruegeria pomeroyi DSS-3]
MTAALRIGGACGFWGEAPHATAQLLAAGVDVLVYDYLAEITMSIMARARLKDPDQGYATDFVTEAMVPNL
TAIAKQGVRVLSNAGGVNPEACAEALRERIAAAGLSLRVAVVTGDDLLARASEFVKCTEMFTGAAMPPLE
RIASMNAYLGAAPVVAALRAGADIVLTGRCADSALTLAACVHHFGWDLSDHDRLAAGSLAGHLLECGPQA
TGGNFTDWEVAGDLARIGYPIAEVAADGGFVLTKPEGSSGLVTPATVGEQMLYEIGDPRAYLLPDVVCDF
SGVTLEQAGPDRVRVSGARGRAPTGRLKVSVTWADGYRGGMVFQMTGRAARAKAQAFAQAGLDRAQARLA
ALGAPGYREVSFEAFGGRPAPDAPEEIAFKAAVRHDDARAVGLFLKELVGAALATPPGLHFFTGAGRPRP
SPVVALFSCLIPADAVRASVVLDGADLSFDAPAPPLRDIEEGLAPCPPEPDMELELEMRPLEALAWARSG
DKGDSANIGVLARRPDYMPYIWAALSPEAVMRFFDEKSPAQIQRFYLPGCHAMNILLTGALGGGGVASLR
NDAQGKAFAQELLSLPVPVPVGLITTD
>gi|56695490|ref|YP_165838.1| acetyl-CoA carboxylase carboxyltransferase [Ruegeria pomeroyi DSS-3]
MRFISQLDKDSDCYRRNRADMLALVDQLRALEARPMALSEERRARMEARGQITPRDRLARLLDPGLPFVQ
LHSLAGYMVDSADPETSVPGASVIIGIGFVSGVRTVVVVDDSGIKAGAMTEMTAAAFLSAQEVALKQRLP
FLHLVESAGANLMEYRVELWAHGGKLFRNLARLSAAGIPNIAVLHGPSTAGGAYMPGLADYVVGVRKNGM
AALAGAALVHAATGERANDRDLGGSEMHAQTSGLVEYLAEDDAHGIEIARQVVAALDWNKSLPERPAPAD
IAPPLDPEDLAGLVPVDYRVPYDMRELAARVVDGGVFQDFKPRYGVSTVCLQAAIQGIAVGIIGNNGPID
PDGATKAAQFIQLCGQSDTPLIFLNNTTGYMVGTAYEQAGMIKHGAKMIQAVTSVDVPRITLYVGASFGA
GNYGMSGYAYEPDFLFAWPNATTGVMGGEQAAGTMAMVARAGAARKGQDLDEARLAKQSAMIAAHFDQQS
DAFYTSGRCLDHGVIDPRDTRRVLAFCLHTCREARARRVKPGSYGVARF
>gi|56695491|ref|YP_165839.1| acetyl-CoA carboxylase, biotin carboxylase, putative [Ruegeria pomeroyi DSS-3]
MMRFDTLLIANRGEIAVRIIRTAREMGLRTVAVYTTADAGAPHVALADHAVWIGEGPVGDSYLNADRILD
AARQSGAGAIHPGYGFLSENAGFARAVAAAGLVFVGPDAAAIEAMGNKAEAKRLMLAAGVPCVPGYQGAD
QSDAALTREAEQIGYPLMVKAAAGGGGRGMRLVEGPGALSEALARARAEALGAFGSDELILERAVVEPRH
VEFQVFGDAHGAVIHLGERDCSVQRRHQKVIEEAPCPVMTPELRDAMGAAAVAAARAVDYRGAGTVEFLL
DASGGFYFLEMNTRLQVEHPVTEMVTGLDLVALQLQVAQGDPLPLTQDDLRIDGHAIEVRLYAEDPAAGF
LPAIGPVLRWRPAAGAGLRVDAGIAQGQQIAPHYDPMLAKIIAHGPSRTVALARLARAVADTVLLGTATN
SAFLADLLALPEFAEGQATTGLLARSYPEGYGAGAPDPRAVALMVAVLMQHDRDTALAAAGPIPPELLGW
SSAPVLPRSLRVETGGQVFDCTAGAVPGGWRIGVADAQFEIALVHREDGLRARLGGETHDLLAHVSGDTV
HMASGAQRLSLRRQRPGAPDAEALGGGRVTAPMPGLVQAVSVSEGAEVAKGQTLAVLEAMKMQHQITAPV
AGRVARQHVAPGAQLAAGDVMFEIEEEESA
>gi|56695492|ref|YP_165840.1| 2-nitropropane dioxygenase family oxidoreductase [Ruegeria pomeroyi DSS-3]
MNSDLCRKLGIEFPLFAFSHCRDVVAAVSRAGGMGVFGAVLYTPEQLRTELEWIDANCGGKPYGVDLIVP
TSIQRQGGSGPSDDQLLAGLPAEHLAFAEQVLERAGVGADDLEERRCALLHISRNLDSAGAEAMLDVAFS
FPIRLIANALGTPPQIMLDRARAAGVPVAALVGSKQHAQRQVAAGVDILVAAGGEAGGHCGEVSTMVLVP
EVVSVAGDTPVLAAGGIVTGRQMAAAMAMGAAGAWCGSVWLTTAEGEPSQVVKDKMLAASSSDTVRSRSR
TGKTSRQLKSAWTDAWEADGPAPLPMPLQSLVAEPALARIEALAQRGHAGAADLATYWVGQGVGLMTQTT
SAAEVVQDFKRDYLAATERLMATLED
>gi|56695493|ref|YP_165841.1| hypothetical protein SPO0581 [Ruegeria pomeroyi DSS-3]
MEQAGDFLAECQALDAVLDGVSGADWDRPTQFKGWTLNDVLVHLHFWNRMADLSLTDPAAFQARAAETLA
GIGRDGFRATENAMITERGADLRAAWAAQYTDMAERWAGLDPKQRLQWVGPEMSARSSITARQMETWAHG
QEVFDCLGATRTETDRIRNIVVLGVNTFGWSFKVHGRPQPEMMPRLELTAPSGALWQFGEPGANRIAGPA
VEFAQVVAQTRNIADTSLVVEGPLAAEWMAIAQCFAGGPETPPAKGARHRVAG
>gi|56695494|ref|YP_165842.1| acyl-CoA dehydrogenase [Ruegeria pomeroyi DSS-3]
MSLFSSTAAWVTDEHRMFAEAAGRFLDDELVPNIETWVDNGVVDRDFWRKAGETGLMAGAIPEEFGGVGG
GMGFDAVTIYEQTSRGDAGWGYGIQSIVTHYITAYGSEEQKAKWLPGLASGEMVGAIAMTEPGTGSDLQA
VRTTAEKDGNSYRINGSKIFITNGQTADLIIVVAKTDKTLGSKGVSLIALETEGAEGFRRGRNLKKLGMK
ANDTAELFFEDVKVPMTNLIGPEEGHGFYQLMKQLPWERLTIGIMALGAIDFALAETVKYVQERKAFGQR
VMDFQNTRFKLAECKTKAEVLRSFVNDCIGRLEAGQLDAATASMVKYYGSEVQNEIMHECLQLFGGYGFM
MEYPIARLYADARVQMIYGGTNEVMKELIARSMDV
>gi|56695495|ref|YP_165843.1| LysR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MIAPRRFLPSISSLLALEAVDRLGSASAAAEELALTQSAISRQLKTMEEQLGVELVQRDRVRLHLTPAAR
EYVQTARAALTQLAQASLKLKANPTGGTLSLSILPAFGMHWLAPRLQDFARRHPEVSVNLSTRLKPFDFA
SEPFDAAIHFGRRDWAGVDYLKIMREEVLPVCAPELRQKTSDPTWLLSAPLLHLDTRPDAWERWFAVHDL
AAPGLRGMLFDQFSTMIPAVANGLGVALLPSYLVTDDLARGRLVTACDGPAVSLGSYYLVWPKERMIAPP
LASFRVWLQEAFA
>gi|56695496|ref|YP_165844.1| aspartate aminotransferase [Ruegeria pomeroyi DSS-3]
MNISSDTGFRRAGRLDGIELSEIVQISERVAQLRADGADIVALSTGEPDFPTPTHVIEAAHRAALAGQTR
YPATAGTPALRAAIAAEAGVEPANVIVSTGAKQVLAGAFLATLDPGDEVITTAPFWTSYADMVRLAGGVP
VVLDCPGAQGFKLTPAQLEAAITSRTRWLLLNTPSNPTGAIYSEAELQALGAVLDRHPHVWVISDEIYQH
LAYVPFTPFVQAVPTLADRTLIVNGVSKAYSMTGWRIGWGIGPAPLIKAMVAVQGQITSGACSIAQAAAL
AALSGPQDLLVERRAEMLARRDLVVAGLNAAGLECASPDGAFYVFPKTPARMPVDHDFCHHLLDTAGVAL
VPGRAFGMSGHLRLSFAYARQSLEEGLARIARAVAAL
>gi|56695497|ref|YP_165845.1| dehydrogenase/transketolase family protein [Ruegeria pomeroyi DSS-3]
MTPSIKEGPAMDRAQIVHENFLSRVAARDLPKGAPPRPGLTQAQAVSLYRAQVLSRALDRTSRAMQKAGQ
GFYTIGSSGHEGMAAVAQALRPTDIAFLHYRDAAFQIARAEQVPGQQIAWDMLLSFACSKEDPASGGRHK
VLGSKALMIPPQTSTIASHLPKAVGAAYSLGAARRHPPEHRQLPEDGIAMCSFGDASANHSTAQGAINTA
GWTSVQSIPLPLLFVCEDNGIGISTKTPRGWIQASMEHRPGIRYFQANGLDIYETYAVAQEAADYVRNRR
KPAFLHLKTVRLYGHAGADVPTTYLTRAEVEAEEAMDPLLHSVRLLAEDGALASEEALAIYEQTCARIDR
IAVEAATRPHLASAAEVAASLIPPKRECKPTNGPGAEMRAATFGGDMRAMDEPQPMSRLINWALTDLMLE
HGEIVCMGEDVGRKGGVYGVTQKLQQRFGPDRMIDTLLDEQSILGLAIGMGHNGFLPIPEIQFLAYLHNA
EDQIRGEAATLPFFSNGQFTNPMVLRIAGLGYQKGFGGHFHNDNSLAVLRDIPGVIIACPSTGEDAAQML
RECVRLAREEQRVVVFLEPIALYPMRDLHGVQDGGWMTPYPSPDRRIALGEVGVHGNGTDLAIVTYGNGH
YLSQQAVPEIEAAGIRARIIDLRWLAPLPIEALRAATKDCKHVLIVDECRRTGSQSEALMTFFCEESRAT
STARVVAEDCFIATGPAYAAPLPSRDGIVAAALSLTGVAK
>gi|56695498|ref|YP_165846.1| acyl-carrier domain-containing protein [Ruegeria pomeroyi DSS-3]
MTRTAVVICPGRGTYNKPELGYLHRHHGARMDMFRAFDAIRGEAGQEAVTALDGAERYTVGKYSRGDVAS
PLIYAASLGDAQALAEDIEVVAVTGNSMGWYIALAAAGALSAENGFRVVNTMGTLMQERLIGGQLVYPFT
GEDWADDAARKAALLADVARIDALPGHDLALSIDLGGMLVLAGNEAGLSAFEAAQPVVQERFPMRLANHA
AFHTRLQAPVAAEGRQRLGADLFTQPIRPMIDGRGKIWCPGATDTGALWDYTLGHQVTEPYDFTRAVQTA
AREFAPDLFIVTGPGATLGGAVAQSLVLANWRGMGDKAMFQARQAEAPLLVAMGREDQRGLVTAA
>gi|56695499|ref|YP_165847.1| hypothetical protein SPO0587 [Ruegeria pomeroyi DSS-3]
MSDNTRTLWHLTSAEQVTAPPLAGDVTADLVVIGGGFTGLSAALHAAEQGADVRLVEAEAPGHGGSGRNV
GLANAGLWLPPDDIRAHLGDAVGNRLIALLAGAPALVFELIARHGIACEPVRSGTLHCAHSPSGLADLCR
RHAQLTASGAPVELLSAEETTRRTGSGAFHGALFDPRAGTIQPLAYACGLARAAQAAGARLHGQSPALEI
EHKDGAWQVRTSGGSIRARKLIQATNAYHRGLADRRPAHVPVHYFQYATDPLPEKTRAAILPGGEGCWDT
GLIMTSFRLDRAGRMIIGGMGALDHPASGIHRAWVRRKLAQLYPALSRQPLVTGWHGRIAMTGDHIPKIT
RPGPGALAAHGYSGRGIGPGTLFGKAMAEALLSGIETNLPIPAIDRHAERWTALQQAYVETGATLMHLIR
ARVGY
>gi|56695500|ref|YP_165848.1| LysR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MSKFDFTDLDGKVLRCFLVILEESSVSRAADRLGVTQSAVSHTLAKLRAVLGDPLFVRSGQGLTPTERAL
SLREPVQRVLDGIKSLTDARPFDPLGEEMHFDIAANDLQRELIFPELLCRARAEGVRLSLGFVPSGVPDP
ALLRSDRCQLVLTPLPPDGPDIYQRRLFTSPLQIYYDASHRSPPDSWQSYCAAEHVEVRFIDGRSANVVM
RGVDQSQIRPPTVVLPHFGAIPAFVKGSDLISTDTALMKLGPLATLDCAPLPFACDPVSIYMVWHERSTA
DPAHRWLRARVEAIAARLQRSAQ
>gi|56695501|ref|YP_165849.1| oxidoreductase, NAD-binding/iron-sulfur cluster-binding protein [Ruegeria pomeroyi DSS-3]
MVLLSIPRYAKRAVRRRRMGIRFFSDRDRPVHMGPYPLERLARREAVADLSTVPQIPVLSFHRPERPESI
VNAMGEFQAMLDAIRDGLVNPARAEISADPLERANHLKAFGYFNDASMMGCGPLPAEALLPAPRRNPDID
RLAEALRTRQTKTLASGIDVIMADLKESMEAPPRPIDSHRHAIVFLYEHHRDPEADEPGAEWIHDAQDHR
ACLLASENAVVIANYIRLLGYDARAHTAMSSDVDLGRLALAAGLVTLEGGQLAAPWLGRRFGLAAVTTEM
ELAHDRPLAPLAAQSWAATRGPAWWLGKGFAKSALNRDPYARRRYVDGAHPFERLNRVETPTTYIDEANV
ARVPKRADMFARAQFGDMGKALQEGAKGGHYVRKAAPSFAQRRALGAFVLLQDGDRADVPRPIDPRRNAA
NLKAASYFLGIDAVGLSRCPTWAWYSHDATGEAITPPHDQAISMIVDQGYETMEGSSGDDWIAVAQSMRA
YLRFSLLGGVIAQQIRNLGYKAKAHTVMDGEVLQPPLLLLSGLGEVSRIGEVILNPFLGPRLKSGAVTTD
MPMSHDKPIDFGLQRFCEACNKCARECPSGAITAGPKRMFNGYEIWKSDSQKCATYRITTQGGAMCGRCM
KTCPWNLEGLFAERPFRWAAMTVPAAAPALARLDDALGHGGLNEVKKWWWDIELQPDGAYRPTTGPVNRR
GLQRDLDLKYEDQTLAVYPAPLAPHPWPYPFPMDREAGIAAYQAMIGADEYRARLAAGDLSVVHRYTVPD
ADTAPVIRVEVTRAEKMTGEITKYEFAAPDGAPLPEWTAGAHLDVLVAPEFLRQYSMSGDPTDRTTYQIG
VLREEEGRGGSKLMHRIFAPGRRVFISKPINHFELDEGATRSFLMGGGIGITPMIAFAHRLHALGADFEL
HYSVPSRTSAGYLEDLDAMPWADRVHLHVSDEGSRADLDAVLAGFQPGWHVYTCGPERFMDGVMQAAERQ
GFPEEARHLEYFSVPEQPAYENHPFTLKLARTGREIAVPADKDAAQVLNENGIHIDVKCSDGICGVCKCG
LIAGAVEHRDFVLSGKQREGAIILCQSRAAEPGGVVEIDL
>gi|56695502|ref|YP_165850.1| LacI family transcription regulator [Ruegeria pomeroyi DSS-3]
MTAPSTQPTPTLADVARRAGVSTATVSRCLNTPDRVIEETRNRVLEAVRELGYSPNFGARALAAKRTNTI
GAVIPTMENAIFARGLQAFQEELRLKGITLLVASSSYRADLEEEQIRTLVARGADGLFLIGAHRDPALYD
FLNRRGIPTLAAWVHDPDAPVPTIGFDNHAAMLDLAREVIARGHRRIGVISAEQASNDRARARVAAIRAA
MAEAGLGADTLSLVETAYGIDEGAAAFDTLMQRTPRPSVVMCGNDVLAVGAMGRAKETGYDVPGDVSITG
FDDIELAKVCSPGLTTVHVPHRQMGTQAAQALVAMVAEGAPGQGQRLDTYVVLRGSLAPPRA
>gi|56695503|ref|YP_165851.1| TRAP dicarboxylate transporter, DctP subunit [Ruegeria pomeroyi DSS-3]
MKDDRTGLASATRRNFLKLAGSGSFTAALVAGAAGTLWSTEAAAQTAKEEKEREAAASHVMTVATAYVLG
ASRSYPIMQLDLKENIQNATNGKVYVKLAPGGQLGAGGALVQKVQGGTIQAAQHSLSNFAPFASAVDLIN
MPYFCGSNQRFTNLVSSDAWKTEVHPKVEAAGFKALFYIVIDPRVVAVRKGGNAVITPGDLAGVKFRVPG
SKMLQQYYRMVGANPTPVAWGETPSAIKQGVADALDPSVGALYVFGFKDILSHVTFTQAVPDSQVFSMNL
EWFNGLPADVQEGIMFAGEVTSQQNLAKVPAARAYAMSELTKSGVEFHSLSADQLAEWQATGGYQRSEWD
SFKTELAGSMDAFNRLEEAAGTMGRYYVHDA
>gi|56695504|ref|YP_165852.1| TRAP dicarboxylate transporter, DctQ subunit [Ruegeria pomeroyi DSS-3]
MPLARREGHVTPILNALNRNAERWALLVFYVMLVVTMAVEVLRREIFAYSSIWGEEIVRYSFIYLAWIGA
ASAVKERGHIRIDVLMHYLGRRAKALLYIFGDLVMFVVAVIALYWSFETVLVSAKFGSVSHGLRISMVWF
LMAVPVGFSLMVLRLVQSFLRDLRSLRDGTPVYEGDKLFD
>gi|56695505|ref|YP_165853.1| TRAP dicarboxylate transporter, DctM subunit [Ruegeria pomeroyi DSS-3]
MLWNTLNQTVELGWDFYLPVIMFVGLIALAVPVWAAIGAAAITMLIMSGDMPLSAVGESLFTGIDAFALT
AVPLFILTGDVLVRTGLSRKFLDVAEALTQFAKGGFGSATVLVCGMFAAISGSDAAGAAAVGRMTIDRLV
ESGYPRPYACALVAAGACTGILIPPSIAYIIIGLVLGISASTLFLAALIPGLCILISILVTNVVMNRING
WEGGGNISAGEYFGNLGRSLKSGWYAFIVPGIIFYGIFSGRLTPTEAGATAVVVTVLMGFILRTLSLSDF
PAMLVSSAKVNGVILPIIAFSAPLAEALAIMGVPQGFVAAVTGMTDEPWLLILLMIGILIAAGCVMETTP
NIVILAPILKPLADNIGMNEIQFCIMMITALGVGFITPPLGLNLFVVSGITGESILKIAARAVPFVLFML
LVVLLIAYLPAISTTLLPDIYK
>gi|56695506|ref|YP_165854.1| histidinol dehydrogenase [Ruegeria pomeroyi DSS-3]
MTIEYLKKASLTSKSDASDVQETVRAILADIEAGGDQVALDYAAKFDRYEGSIILSPEEIEAACAKVPEK
LKADIRFAHDNVRRFAETQKATLTDVELEVVPGVITGQKAIPVDAAGCYVPGGRYSHIASAIMTVTTAKV
AGCKHIMACSPPRPGVGVAPAIVYAAHICGADTIMAIGGVQGVASMAFGLFGLPKAKILVGPGNQFVAEA
KRMLFGRVGIDMIAGPTDSLILADRTADPHIVTTDLVSQAEHGYNSPVWLVTDDRALAEKVIEMIPSYIA
DLPEVNRDNAAAAWRDYAEVILCADREEMAATSDRYAPEHLTVMAEDLDWWLDRLSCYGSLFLGEESTVS
YGDKAAGTNHVLPTSGAASYTGGLSVHKYMKIVTWQRGTREGYKPVAEATARIARLEGMEGHARAADVRL
AKYFPDETFDLTANG
>gi|56695507|ref|YP_165855.1| gluconate 5-dehydrogenase [Ruegeria pomeroyi DSS-3]
MADSGYLFSVRGRVACVTGASSGLGRRAATVLAQAGAQVVGVARRADALAEWQAEAGGETHAIPYDLSDR
DGLEGLARQVVDPFGAPDILVHAAGINTRQPADEVTPEGWDITLTLNLSVPFFLSQYLVPGMKARGWGRI
VNFASLQTTRAFPGGIAYGASKGGVAQMTRAMAEAWSPHGITANALGPGFFRTELTAPVFADPERAARNA
AQTCIGRNGEPEDLDGPLLFLCSQASAYVTGQVLMVDGGYTAK
>gi|56695508|ref|YP_165856.1| sorbitol dehydrogenase, putative [Ruegeria pomeroyi DSS-3]
MKALVYTGPETLALREMPNPVAGPGEQLIRIARVGICGSDMHAYLGHDARRPAPLILGHEVAGVIVGGPR
DGERVTVNPLVTCGACPACREGRDNLCPTRQIISMPPREGGFAEYVAMPEGNLVTVPDSVPLAQAALAEP
LACGWHTVRLSLAALSGARDTALVLGGGAIGLGAALCLTAQGVPQVTVVEPNPARRAYLSDRCGQHALDT
PPAGSQYDLVIDGVGYAATRATASAHVRPGGVIGHIGLGEDTGGLDIRRMTLQEITFIGTYTYTSEDFRQ
TAQAIFDGRLGPLDWTEARPLDQGAAAFADIRAGRVAAPKVLLVPDTAPERS
>gi|56695509|ref|YP_165857.1| universal stress family protein [Ruegeria pomeroyi DSS-3]
MYHRILVALSLEHGISERALETARALAAEGASIRAVHVIEPPNPAVRAYLDADLVAKARADAEARLRARV
ADAPGVEPVLLSGHSSRALTEYATDMGIDLIIVGSHRPGLSDYFLGTTAARVVRHAPCTVMVLR
>gi|56695510|ref|YP_165858.1| FMN-dependent alpha-hydroxy acid dehydrogenase family protein [Ruegeria pomeroyi DSS-3]
MLRQTGIHSSEDARRLARKRLPWMVFDYVDGAAGEEHGAMLARRAIQDIRLTPRVLRNVSRRELRVQLFD
KLAVRPFGISPMGMCNLSAPDADLMLARLAARDRVPHGVSTVASTDMETLLKASGGMAWFQLYFSGDGSG
TMKLVERARAAGYGTLVLTVDVPEVGRRPRELRHGFKMPFRIGPRQFVDFALHPRWSLSTLIRGRPQMAN
FDGRNYVFDRTESRAAADWTTFETLRATWPGKLVVKGVLHPGDALRLKALGADAIQVSSHGCRQLDAAPP
AIEALAAIRQAVGPSYPLFYDSGIRSGEDVVKAYAMGADFVFLGRPLLYAMAAGGEAGLHQLWEVLAQEV
SLTLAQLGLTEMAALREGAAR
>gi|56695511|ref|YP_165859.1| agmatinase [Ruegeria pomeroyi DSS-3]
MSIFLDSELTTAERGEDARFRIIPVPLERTVSYGSGTAGGPAAIIEASNELERITNGAEPCAQGIYTEPP
LDCDGPLPEVMERLAQRTEAAIRAGRVPVMLGGEHSLSFGAVMGVARALGQPLGLVQIDAHADLRIAYQG
EKHSHASVMHLLAEEGIRLAQFGVRALCQQEMDERARHGVFYKDAEELVTTNIHAIDLPEDFPQLVYVSF
DVDGLDPAQMPATGTPVPGGLGYYQALHLVEHALKGRKCVGLDVVELAPDGNAAWDFTAAQIVYRLMAAC
TA
>gi|56695512|ref|YP_165860.1| carboxynorspermidine decarboxylase [Ruegeria pomeroyi DSS-3]
MPEMADVMQTQAGDAGAFRHFDLSRVPTPCFVVDEVAIERNLKILRDISDRSGAHVLSALKAFSMFTLAP
LVRQYLGGTCASGIYEARLGREEYGGEVATFCAGYKEQDIDEILSLSNHIIFNSPAQKDRFLSRAQAAGV
QVGLRINPEHSEGEIAKYDPCAPCSRLGTPVSLLTPETLKGVDGLHMHTLCEQGFEPLLRTWAAVEPKLA
PYLPGLKWLNFGGGHHITRADYDRDALIDFLKSLRARHGLDVYLEPGEAVALDAGILVGEILDLPSNGMD
LAITDISATCHMPDVIEAPYRPALMDEADSGHTYRLGGPSCLAGDVIGDYTWDQPLTIGQRFAFLDQAHY
SMVKTNTFNGVPLPTIALWNSKTDALRIVRQFDYSDFKDRLS
>gi|56695513|ref|YP_165861.1| saccharopine dehydrogenase [Ruegeria pomeroyi DSS-3]
MGKTLVVGAGGVSHAAVHKMAMNSDIFTEITLASRTKAKCDAIAASVKERTGVTIQTAALDAMDVAATVA
LIKETGAEILVNLALPYQDLKLMDACLEAGCHYLDTANYEPEDVAKFEYHWQWAYQDKFKEAGLTAILGS
GFDPGVTSVFATWLKKHKLATIRQIDVLDANGGSNDQAFATNFNPEINLREVLAEARHWENGAWQVTPAM
THKVEFDFPGIGPKNMYLMYHEELESLSAHFPEIERARFWMTFGDAYIMHAKVLENVGMTRIDPVMHDGK
EIIPIQFLKTLLPDPGTLAEETKGKACIGDIATGQAKDGSGEKTYYIYNICDHEECFREVGSQAVSYTTG
VPAMIGAAQVLKGNWVEPGVWNMEQLDPDDFMDMLNNHGLPWQVHELDGPVSF
>gi|56695514|ref|YP_165862.1| arginine decarboxylase [Ruegeria pomeroyi DSS-3]
MSAPQVWPWTNQTPPLKGDPTPEPKPQERPTRLKHPLDAPHSVYGVDKWGKGLIVVTEEGEIGLKNPLRP
EADAVSLPGILHDLEQRGIRAPMILRISSYLENEICHINDSFADAIARSGYKGAYRGVFPIKVNQQAQVI
DRIVEFGHRYSYGLEAGSKPELVIALAHKLATDALIVCNGVKDAEFVRLAILSRKLGFNTVIVLESPKEA
DTVIAVYEELGIEPLLGVRVKLTNQISGKWEESSGDRSSFGMNTDQLVRVVDKLRDAGLIHCLKLQHSHL
GSQVPDVNDVRRAVGEACRYFTELSAEGVPLTHLDLGGGMGVDYTGEKRATENSINYTVEEYCANVVETV
AYAMDEAGIDHPTIVTESGRAVVATSSLLVFNVLESTLYDAPTAPGTEPDDHHLVSDLAAVNGYLTPARL
QECWNDATFYRNELRALFRRGYVDLRQMARAERIYLSLMARIKTMVAEVEAETDLDAQMEKIADIYHCNF
SLFQSLPDVWAIDQLHPIVPLQMLNEAPDRRAVLSDITCDSDGKVDRFILADGVSPSLPVHSLPEDQDYY
LGVFFVGAYQETLGDLHNLFGDTNVVTIDLRADGGFDLLHEQEGDTISEVLSYVEYDPADCVAAFRKLVD
GAISNGCLKASERKLIIGAYRDSINGYTYYE
>gi|56695515|ref|YP_165863.1| hypothetical protein SPO0603 [Ruegeria pomeroyi DSS-3]
MSTQKIWDLHLTYDGPLSQEFLTGTRQLAESIAQEPGIVWKIWTVEDGTNHFGSTYLFRTLDHLETYKKM
HLKRLADFGIRVVSDHVFDIMEELSAIDNAPLQG
>gi|56695516|ref|YP_165864.1| hypothetical protein SPO0604 [Ruegeria pomeroyi DSS-3]
MTNKTFLTAHGVIYMFFALALFFAPALLWPNYGLQLNDRYAVFLSQHNSIFLGGIGVTSFLFRHVAQGSE
AARTFLTGLIWTNALGVVITLYACLTGIFSGFGWSDPIFFALLAVLSFMQLGKNR
>gi|56695517|ref|YP_165865.1| MarR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MKHKTQDRENQALVLALLRSQQLFMRAMGPVFRAHGLTAPQWDALETLANKGPVSMNDLMRFTLSTSGNL
DVVIKNLIQAGLIEKSVDPEDKRGRILQLSPEGRRKVDDFIPIHNQALDQLFSGLGTAGKRQTITALNQL
RKTLTQAPRG
>gi|56695518|ref|YP_165866.1| hypothetical protein SPO0606 [Ruegeria pomeroyi DSS-3]
MAQCIVAAAASGPVLVCDEGLSFWGGVDPETGRVIDAHHPQHGAALAGAVVMMPTSRGSCSGSGVLLALA
LNGHAPAALVFREGEDVLTLGALVAAWMYDRPVAVLRLSAAEYAALAMEPSAEVTPERLTAGALSLTLEP
LSGETLDLSDADRAMLSEEAAPPVRLAMRIICAMAAAQGAERLTDVSRAHIDGCIYHSEANLRFAEDMAA
MGGRVCIPTTMNAISVDHANWRAQGVPPAFGGPASRLADAYLRMGARPSFTCAPYLLDDIPQAGEAIAWA
ESNAVVYANSVLAARSVKHPDYLDLCMALTGRAPLAGVYLDANRKAQVEIRVERPEGADDAFWPLLGYLA
GRLAPDRIPLLTGLEGSAPSGDDLKALCAAFGTTSAAAMLHVAGVTPEADGALTDGAAHMAIAPGDFARA
WDQFNPGPQRVELVAIGSPHASAHECRVLTDLLDGHRIADGTATIVTIGRGERDKLAGDGVLARLQALGV
QVIPDLCWCSVTEPVLPPATRTIMTNSGKYAHYGPGLSGRAMRFGSLAHCAEAALTGYAPGRPGWINGQD
RV
>gi|56695519|ref|YP_165867.1| proline racemase, putative [Ruegeria pomeroyi DSS-3]
MRSSKTIHVISAHAEGEVGDVIVGGVAPPPGETLWEQRNWIARDGRLRNFMLNEPRGGVFRHVNLLVPPK
DPRADAAFIIMEPEDTPPMSGSNSICVATVLLDSGLVEMVEPVTELVLEAPGGLVHVRAECRDGKAERIF
VRNLPSFAAQLDVSLDVPGLGRVRVDTAFGGDSFVVVRPQDVGVEITRDRARDLAEMGIAITNAANAQLG
FHHPENPDWRHISFCLFAGGIERRDGILRAASAVAIQPGKIDRSPTGTAVSARMAILHVRGDMAQGEQFI
ATSIIGSEFSGRIAGLTSVGERPAILPEISGRGWITGMHQHMLDPADPWPDGYRLRDTWGV
>gi|56695520|ref|YP_165868.1| sugar ABC transporter, periplasmic sugar-binding protein [Ruegeria pomeroyi DSS-3]
MPQSISGIADNREEKMRRYLLSAAAVCAVVAGQAAYADEAAAKKWIDEEFQPSVLSKDEQMAEMQWFIKA
AEPYAGMEINVLSEGIPTHSYESEVLTKAFEEITGIKVNHQILGEGEVVQAVQTQMQTKRNLYDAYVNDS
DLIGTHSRLQLAYNLTDMMAGDFKDVTNPGLDLGDFMGTQFTTGPDGDLYQLPDQQFANLYWFRKDWFDR
EDLKAAFKAKYGYELGVPVNWSAYEDIAEFFSEDVKEIDGTAIYGHMDYGKRAPDLGWRMTDAWLSMAGA
GSKGEPNGIPIDEWGIRMEAGSCNPAGASVTRGGAANGPAAVYAIRKWDEWLRKYAPPGAASYDFYQSLP
ALAQGNVAQQIFWYTAFTADMVKPQSEGNNTVDGDGNPLWRMAPSPHGPYWEDGQKVGYQDVGSWTILNS
TPLDRAQAAWLYAQFVVSKTVDVKKSHVGLTFIRDSSVNHESFSERAAKLGGLVEFYRSPDRVRWSPTGI
NVPDYPKLAQIWWQQIGDVNSGAFTPQEAMDRLAFEMDTVMARMQAADEAANVYGGCGPRLNEEKDAEWW
FANGGAKPKLDNEKPQGETVNYDELVARWAKN
>gi|56695521|ref|YP_165869.1| sugar ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MALELRNVTKRVGADLHIKETSLVLETGHFNVLLGATGAGKTSLIKMMAGLDPVASGQILMDGQDVTGQS
TQKRNISLVHQFFINYPHMTVFDNIASPLKVAGLAKSEIQGRVEHAADILKLRPMLHRRPHELSGGQQQR
TALARAIAKESRAVFLDEPLANLDYKLREELRDQLPDLFAGRGAVVVYATSEPEEALLLGGHTALMEDGR
VTQFGRTAEIYRDPSNVLAAQVFSDPPINTAQIAKQGDTARMGPDVSWTLSGAAAGLADGPYVIAIRPHH
VSPVASSEATVTLSGRVQVTELSGSESSAHFDMGSGSWVSLAPGVHPYRVGEMHDFHMDPSAAYVFAPDG
SRVA
>gi|56695522|ref|YP_165870.1| sugar ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MAKITLSKLRHSYYPNPKTPDDYALKEIDLDWTDGGAYALLGPSGCGKSTLLNIISGLLVPSEGRILFDG
QDVTELPPDKRNIAQVFQFPVIYDTMTVYDNLAFPLRNRGRDEATVRERVTAIAEMLELSDLLNRKAAHL
SPDNKQKISMGRGLVRQDVNVVMFDEPLTVIDPHLKWKLRSKLKELHQRVRATMIYVTHDQTEALTFADQ
VVVMQEGEVVQIGTPVELFDRPAHTFVGHFIGSPGMNILPAEVSGGVAHFAGQAIPLEGPITAAPGARTE
IGIRPEFVSLGLSGLPATVTKVSDVGRHTVVECEVAGSRVNAIVTGSGPEKGAMVQLEFRRDQTRLYADG
WLASEAAEGAA
>gi|56695523|ref|YP_165871.1| sugar ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MKTEYQKAWFFVLPVLVLVAFNALIPMMTVVNYSVQETFGDNLFFWQGLGWFEQILRSDRFHAALGRQFL
FTFLILIIEVPLGIAIALSMPRKGFWVPVCLVLMALPMLIPWNVVGAMWNIFTLPDIGLLGYFLNHVMGI
NYDMTQDPLAAWITIVTMDVWHWTSLVVLLSYAGLVSIPDAYYQAAKIDGASNWAVFRYIQLPKMKTVLT
IAILLRFMDSFNIYTEPFVMTGGGPGNSTTLLSIDLVKIALGQFDLGPAAAMSLIYFAITLLVSWLFYTL
MTKDDQN
>gi|56695524|ref|YP_165872.1| sugar ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MQKRTLVPIVYILFLMLPIYWLVAMSFKTTNEILAGFSLFPQTFTLENYRVIFTDPTWYWGYINSILYVT
LNTVISVAVSLPAAYAFSRYRFLGDKQLFFWLLTNRMAPAAVFALPFFQLYSAVGLFDTHLAVALAHCLF
NIPLAVWILEGFMRGIPKELDETAFVDGYSFPRFFATIFVPSIKAGVGVAAFFCFMFSWVEMLLAKTLTA
VEAKPIAATMTKTASSAGYELGLLAAAGTLTIIPGAIVIWFVRNYIAKGFAMGRV
>gi|56695525|ref|YP_165873.1| hypothetical protein SPO0613 [Ruegeria pomeroyi DSS-3]
MLSWMAWTWPTALLFIGIFSAIGVLVVLEIRHPGGDARKGVLGLTTTRGDRLFISLLGSSYIFLAWLGLV
GLPLWVPLGLALAWGSFCFWKV
>gi|56695526|ref|YP_165874.1| transcriptional regulator, putative [Ruegeria pomeroyi DSS-3]
MARKQERSLLTEVELEFMTVVWEIGSGTVRDILAELNKAQTRAYTSVATVLKIMEQKGFLTSERHDRSLV
YRSAVPKEDYQRTTLKDLSSKLFDGAPAALVARLVDDEEVTDDMLESMRALLNERLGDNGR
>gi|56698726|ref|YP_165875.1| hypothetical protein SPO0615 [Ruegeria pomeroyi DSS-3]
MDGEVLLNAYLDLNLLLVAGVAIWSLLRWAVAKTRLGTAYMPQLRLLNGLTVLLVASPLLAMAITTWIVA
HPPNIPDLLVRQYLHGNVGLSASQFEALLGLREDMVRALLAQHEVWAQVVAAAFLAGALFCTLHMGLSVL
RLSNSLRGAHLWKRIGRVHLLVSDTARVAYSTRGLRNRYVVLPSALLEAPQDLRMTVAHELQHFRQSDIE
CEFLLELLRPLLFWNPAFFLWRRQVRMLREYACDQALMARPHFDMRAYCECLFRACRVAAQNRVLFARTT
PTVALVDRRETRRPSTLHSRIEALTATRQDTAGPTAWLLISGLLVASVLSTMLVMQRSSDWSHDRIMLST
IVNLERMAQRNATVASPFQGGFVVATD
>gi|56695527|ref|YP_165876.1| zinc-binding dehydrogenase family oxidoreductase [Ruegeria pomeroyi DSS-3]
MKAVLYRAFGAARDVLTLEEFPAPRPGPGEVLVDLAFSGVNPSDVKARAGARAGVTELPYPAIVPHSDGS
GVIRAVGEGVDVARVGERVWLWNGQWGRAMGTCAEQIALPAEQAVPLPQDVSLETGAVLGIPGLTAAHVV
FSGGPVSGKTLLVQGGAGTVGFLAVQLAKWGGARVIATASAGAAERVRAAGADAVLDYAAPDLAAAVLAA
NDGAPVDRIVEVEFGANAEVDAAVIAPNGRINAYGSARQMAPVLPFYPLMFKSVTLEMTLVYLLDTANRQ
AAIGHLHSALSAGALSCPVQEIYALDAAAAAHEAVERGARSGAILVRTSG
>gi|56695528|ref|YP_165877.1| AraC family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MEDLVVGIDLLLRGGAVTALAVCALIFLANRALWPRGLSVPALCLGLGAYLLVSSPNLGLSGTWAETGLV
MLAGAVPVLAVWAGAEIFLDRPVYRPWHGMLAVLVTAGAWLAPILPFAATLRGILVVLLYAGLLYIALST
AAVDLVESRRRFRRWFVALMALTGLGISVVEFLKLDADLPPVMYPLHASGFLVLTLLFLSWAVRIAPDLW
PLRREPEPEPARPLSGADAAVLQRVEAAMADGIWRQEGLTIAQLAAAVDAPEHRVRRAINKGLGYRNFAQ
FVNEHRIEAACEILSDPARADTPVLSIAYDVGFASLGPFNRAFREKHRQSPTQYRNRHCQVVGGYVLD
>gi|56695529|ref|YP_165878.1| sterol desaturase family protein [Ruegeria pomeroyi DSS-3]
MEDQCIISHLAGIFSGVLATDFLRYAVGAGGVYLTVNLALAARLRARKIRAYEPPKGQIGREILASLRTV
LIFALNGTLIVVGAEAGLVPIYREIATHGWAYLFFSTTVLIVAHDTWFYWSHRLLHYPPIFRRFHRLHHK
SHNPTPFTSYSFDLGEAVVNAIYLPLILLVLPAHPVAILVFVTHMMLRNAIGHSGYEIFPANRRGKPLFD
WITTVTHHDLHHAHAGYNLGLYFTWWDRLMGTEHPDYHEAFQKVAKPASWPSVRAVILAFAIFTGIAVSD
ARAERLSGAYASPGFGVIVRFEPCNANPGLTCGRMIWAWDAAEVPHAQSGDVIVIDLHGDGNVWSGRLKN
PENGRMYRGSVVQRSPDTIVLRGCAGPFCTSQIWHSVRALRRALESAE
>gi|56695530|ref|YP_165879.1| hypothetical protein SPO0620 [Ruegeria pomeroyi DSS-3]
MSKPEFIARQGRKPTGWLGHIVARVMARETRPENDRALSFLDLADGDSLIDIGCGHGETLFQADRIVRLS
GSVGVDFSEVMLKRARARNRDAVWDTRMAFHCADTAALPFPDKRFGKALSVHTIYFWPNPAAHLAEAFRV
LRRGGRFLFCYRSTADRRAVEEFPDTVYRFPSVQEVEEKLKLVGFLGPETTTEDIKGRLTHWSIAEKP
>gi|56695531|ref|YP_165880.1| ankyrin repeat-containing protein [Ruegeria pomeroyi DSS-3]
MTKSLDQLRRDAKALGKAVADGDKGARLRVQGILTDPKQGSYKHADFLHVIARETGFATWPALKLAVETE
GMDRAQKQGRLRWALYNGSPMTVNHLLREDPSLPEGQVPLLVALYDVEGMREILARDPDAATRDYPPRRP
MCHLAFSKHIKSQPEKQADMLAMADLLLAHGANVNDSFPSAPDTDHRLSALYGAIGHADNPALARWLLEH
GADPNDNESLYHSTECGHVESLRLLLTHGANPMGTNALPRAIDFDNTEMVRLLLEHGANPNEGSSPHPSG
EPTLVIPALHQAARRLASAEIAQLLLQHGADPSARNRGHTPYAFARVFGNTAVAEVLEQAGARTDLTVPE
EILVRAADGTNSTHDRIDMQQIPEEMKYLLCRLVWREGTLAHMQRLVAMGFDPNSPDEMGMPPLHLAGWE
GMTEVMAYFLEQSPDLDHINEYGGTLLSTIVHGSENCPQRHRRDHIECARMALERGVELPQKAATYATVP
EMSAFLADWAESHPSQVVVHGVV
>gi|56695532|ref|YP_165881.1| ISSpo1, transposase [Ruegeria pomeroyi DSS-3]
MKSKSPEEIAVIGVDIGKETFHLVGFDHAGERVLRKNIKRLAIKPTFEKLPRCVVGMEACISAHFVSRML
RELGFEPRIIPAIYVKPFNKGQKNDYNDAEAIAEAAMRPNPRTVTEKSQDQLDLQAMHRVRSRLVARRTA
TINQIRAFLIEQGITVRAGRHRLQSSFAAILENRRDEISSRMRAILMGLYGDWLWVDERIKAISSEIEEI
SRSEENSANIMTIPGIGPLISTAIVSAIGKGEVFDRGRDFAAWVGLVPRQFSTGGRTILGRISKRGNSYL
RMLLVQAANVILMRPHRWDALGLGPWLRGVVGRMPHNKAAVALANKLARTAWSVLRYGSKYQVERDEALA
AI
>gi|56698709|ref|YP_165882.1| cytochrome c oxidase domain-containing protein [Ruegeria pomeroyi DSS-3]
MVQSIFFLFCLILAPLVAHLRQWSPTALFAVATLVYAAFGGANFVSTQIVLSNIRETEPAYRDTYYVVNR
GYVSLNLGLAMAVFAVLTWLQTRFGAMLYPKITKALFWLLHLGLIGGSAFSTMLVFLLPKPRRFIDYPEF
METFILVGSWATLISSIAVLGLLGLLVWSSALTWLASRNSGH
>gi|56695533|ref|YP_165883.1| hypothetical protein SPO0624 [Ruegeria pomeroyi DSS-3]
MRKYGRPYHLPTSPGVMSDDKILRDLSVLTAATEVVFTEKMDGENTTIYQGGCHARSPDSGYHASRDWMK
AFAAVISPSLAENERIVGEYLFARHSVAYDNLNSYFLGFAWIVDGTVKTWDSTVERFNILGIQPVSVLHR
GSFSDAAVNAVLADLDLSKQEGFVVRTTSEFSETNMGTCMAKYVRADHVQSETHWMNAEITRNGLKKA
>gi|56695534|ref|YP_165884.1| transposase, degenerate [Ruegeria pomeroyi DSS-3]
MLWVSDFTYVATWKGFVYVAFVIDAHARKIVGWRVSTSAQTGFVLDALEQAVHDRKPTKAMGLVHHNDRG
SQYLSIRYTERLADAGIEPSVGSVGDCYDNALAETSMASSRLRLSIAAALGAASRQWNTRLWNGSAGSTT
AAFPSPSGTSRQPKLRQTSTRLGKLKTWPRN
>gi|56695535|ref|YP_165885.1| ISSpo3, transposase [Ruegeria pomeroyi DSS-3]
MEKNKSSSPDFSVRDFFKRFPDDEACLEHIFNVRFGARHVCRACGVESTFHRMSDRRAFACAACGDHVYP
TAGTIFQDTRTPLQVWFYAIYLFVTTRHGVSGKELQRQLGVTYKTAWRIGHKIREQMDKHDLKAMLQGHV
EIDEAYIGGKRPGKRGRGAAGKTIVMGFKQRGGRLVTEIVPDVKLKTLRAETLKTVDAGATVSTDELYSY
SLLKGEGYTHVAVKHGAKQWTIYDAETDTMHHTNHVESFWRHFKHSIRGTHVSISQRHMRKYLDEFTFRA
NHRGEVNLMFDRLVAAF
>gi|56695536|ref|YP_165886.1| hypothetical protein SPO0631 [Ruegeria pomeroyi DSS-3]
MTSFNSFMRPLAAAILSALVTLAPVAPQAQEAVRGAVTNLPIPRFVSMKANEGNVRRGPSLTHRIDWVFK
RRDMPLQITAEHGHWRKVQDRDGAGGWVHYALLSGVRTVLVEKDMMPLYARPDPASQVAAHFEMGVVARL
GTCTQDWCRISAGGYRGWAPKENLWGVGTDEIRE
>gi|56695537|ref|YP_165887.1| 2-hydroxyacid dehydrogenase [Ruegeria pomeroyi DSS-3]
MPRERLSVVVTRRLPEVVETRLSELFNVRLRDDDTPMSRDELAAALREADVLVPTLNDRIDAGLLAQAGE
RMRLIANYGAGVDHIDVATARQRGILVSNTPGVLTDDTADMTMALILAVTRRIPEGLAVMQKNEWTGWAP
TALLGGRVGGRRLGILGMGRIGQAVARRASAFGMQIHYHNRRRLRPEVEDALEATWWDSLDQMIARMDVI
SVNCPSTPSTFHLMNARRLKLMKPTGVIVNTSRGEVIDENALTRMIRTGEIAGAGLDVYEHGTQVNPRLR
ELPNVVLLPHMGSATLEGRIEMGEKVIINIKTFADGHRPPDQVVPAML
>gi|56695538|ref|YP_165888.1| gamma-glutamyltranspeptidase [Ruegeria pomeroyi DSS-3]
MRIRWQESLCLLWVGAATPLFAQQAADAVAPEGAATGQVRPFSAVVEAGQAAKEAGQPVEAENWMVAAAN
PLAVMAGGNVLRQGGTAADAMVAVQTVLGLVEPQSSGLGGGAFLVWYDGNTGQMTTLDARETAPREATPR
LFQDADGQPLKFFDAVVGGLSVGTPGTPALLEEAHRRWGQANWGSLFGDAIWLAENGFTVSPRLAGLVEG
DAEKLGRFPETAAYFLPGGAAIKAGDTLKNPAYAATLRALAAEGSAAFYGGPIAADIVRTVRNAEGNPGV
LSGADLALYQVIEREPVCASYRAFEVCGMGPPSSGALTLGQILGLLEPYDLAALGAENPESWRLIGDASR
LAFADRGRYMADSDFVPMPTKGLVDPDYLKTRSELLAGPNALESVAPGNPEFDHASNWADDISLELPSTS
HISIVDRYGNVLSMTTTIENGFGSRLMTNGFLLNNELTDFSFKTHDNGVPIANRLEPGKRPRSSMAPTIV
MQDGKPVLAIGSPGGSRIIGYVAQSIIAWADWSMNVQQALNAPHLVNRFGTYDLEEGTDAAGMEEALTGL
GYKVSVRALTSGLHAIEIGDTLKGAADTRREGIALGE
>gi|56695539|ref|YP_165889.1| oxidoreductase, FAD-binding [Ruegeria pomeroyi DSS-3]
MAQITALPRNETGIETVIGILRQRFGDRLQTGQAIREQHGHTTTWIQNQPPDAVVFPTSTAEVSEIVKTC
AEHKVAVIPFGTGTSLEGHVNAPAGGISVDLMQMNNILAVHAGDLDCVVQPGVTREQLNTHLRDQGLFFP
IDPGANASLGGMASTRASGTNAVRYGTMKDNVLALEVVMPDGEVIRTAQRAKKTSAGYDLTRLMIGAEGT
LGIITEITLKLQGIPEAISAARCSFPTVDAACQAVMTTIQFGIPVARMELLDVIAVQAVNAYSKLDLPET
PLLLLEFHGSEAGVAEQAELFGSIAEENEGSGFAWTTSTEERNRLWKARHEFYWASLQLRPGCSALATDV
CVPISRLAECVNAATAKAEELGLFAPLVGHVGDGNFHISPLIDKDDPAEVATTEAFTAWLAELAISMDGT
CTGEHGIGQGKRAYLSRELGQTPRYMAAIKAALDPLGIMNPGKIL
>gi|56695540|ref|YP_165890.1| aminomethyl transferase family protein [Ruegeria pomeroyi DSS-3]
MKTQVKALVVGGGAVGTSIAYHLAKAGWNDVMLIERDELTSGSTWHAAGLLPLFNMSYATTHIHQYSVDF
YKTLEEETGLNAGFAVVGNLRMAQTQDRMDEYMLYASTAETCGVKYEWLTPDQIKERWPLIETSDLKGAI
YHTEDGYINPADVTQAMAKGARQRGVDIVRKMQADAFHWNGTHWEVTCTKMVEKGGNLVPSDEQVVITAE
HVVTASGNHAQRTAKLLGIKMPAIPVEHTFIVMDQDPELVKWREAGNPEHPVVRDADNESYAREERGGWI
LGIYEHGAPARFEYGVPDSFRADLFPLDLDRIADQYMAMAERVPSCAESGLKDDFNGPICYTPDGNPLVG
PAPGLRNMWLAEGFSFGITAAGGTGYYLAQMMVDGEAEIDMASLDPKRYSSNWMTTEFAARKNEECYSHV
YILHHPDEEREACRPLRTAPAYDRQKALGAQFGFVNGWERPNYYGPLDAPENFDHDARSFRRGGWWQYAV
EEAKAIRNGVGLIDATAFTKHVVKGPGATQFLDWFTCNKLPKVGRINLTYALTSAGTTRTEYTIVRNGEN
NYYIVSAGAWTEYDADFLRKAAEDKMEEFGYIEIQDVTTQWGVFAIAGPKSRDVLKEVIKDADPETALSN
KRFPWLSARQIELGMCPVNAIRVAYTGELGWELHHPIEMQRYLWDLLLAAGEKHGMKLVGARAQNWLRQE
KSYRAFGTELGRDATPLEADLPRFVDLGKDFHGKAEMEAKGIRSKCCTLLIDGPSDADPWGREALYTPEG
ARVGRLTSGGYSVAFEKSIGMGYVKPELAVEGTKLKVKMLDQLWDAVVTCDSPYDPKNETIRKDG
>gi|56695541|ref|YP_165891.1| EF hand domain-containing protein [Ruegeria pomeroyi DSS-3]
MMRIRRAGAPPAAKWPDGSGRIARLTCECRQTGVTLMRLLLLASACALGTAALAQGAPGAHFIENWDMDG
DALISAAEIVEKRGEIFVMFDQNEDGALDTAEYDLFDETRRADIEANAGGRKGPMALVDQAMDRAFNDAD
GDGLVSAEEFTAKSAAFFDMLDKNGDGVISSADFKPGG
>gi|56695542|ref|YP_165892.1| hypothetical protein SPO0637 [Ruegeria pomeroyi DSS-3]
MIPEHMIGSALMKTAILLAAMALASILQQLALRGAAPL
>gi|56695543|ref|YP_165893.1| hypothetical protein SPO0638 [Ruegeria pomeroyi DSS-3]
MEQATRKARMLDKSQKPTWTSFEEATQADWDAVMEYEEAYNAALPERILDAIRSLDEAWTPYPINRFQHC
LQAATRAHADGAEDEIVVAALVHDVGDILSPYNHGELAAAMMKPYVSEKCHWILQHHCVFQGYYYNHYWG
GDRNARDKYRDSPYWEDARYFCHEYDQCAFDPDYPTKPLEFFEPILRRVLSRGGGHMELNETAEG
>gi|56695544|ref|YP_165894.1| LysR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MQISALETFLAIASSGSFHAAARHLNVTQTTVSARIKALESALGAQLFERGRGGTRLSAAGLRLMPHAEQ
MLRSWDFVSAEIASDPGARGALRLGAQLSLWDALLADTAIWLERERGVLPFTLNYDHMLDMGDAVAGRLL
DLALVHERPSQPGVEVVDLADERLTLVADRPLRLGPDEMPLFINLAFCAEYDRQWQQVMPPGSRQHIVLG
NTAMGLRYLMRRGGVGYFPDAMIAGPLARGRLHAVAGAPTMRLACRAIYLRDNPGWAQIEAALEGVRALR
DSARA
>gi|56695546|ref|YP_165895.1| alkylhydroperoxidase-like protein [Ruegeria pomeroyi DSS-3]
MSWNDKLAATRAGLRNLHGAIPDTARAFGALGKTVKEGGTLDFKTKEFVALGISIASRCEPCISLHVEAL
VKAGASRAELSDVLAMSIQMGGGPSMMYAAKALECFDDLTG
>gi|56695545|ref|YP_165896.1| hypothetical protein SPO0641 [Ruegeria pomeroyi DSS-3]
MSRTPPSVASIATQGDGARMVAPAAERNMAALCDLLAQVARHQGRALELASGTGQHVSAFAARLPGLQWQ
PTEVDAQRRASIDAYCEALDTVAPAQELNATRPGWGADWAGQDLVVLINLLHLISEGEAATLISEAAAAL
APGGRLVIYGPFMRAGELTSEGDERFHAALTAQDPEIGYKDDFDIIDRMQEAGLELAEVVEMPANNLALI
AEKPRI
>gi|56695547|ref|YP_165897.1| oxidoreductase, FAD-binding [Ruegeria pomeroyi DSS-3]
MIDFLVIGGGIAGLSAGARLSAHGKVTVLEAEEALGYHASGRSAALFEQAYGKPAVVALNRASAAYHHTA
NGGYLTPRGLMLVGAADQAEAFQADIVDMEMTPVSLDEARAMVPILNPETVVYTAYHAEAWDIDTDRLMQ
DFARVIRANGGAVLTRQRVSRIAHGAVWQVEAGEVFEARNIVNAAGAWADQVAVMAGVAPIGLQPYRRSM
ARIPAPGGHDLSGWPMLMGAGESWYAKPDAGKLIISPADADPVEPQDAWADDMVLAEGLARYQEMVTEEV
TRMDSNWAGLRSFAPDRVLVLGPDPDQRDFIWCAGQGGYGFQTSPAASQLLCDLVTGAAPEIEARMVAQL
RPERLR
>gi|56695548|ref|YP_165898.1| aldo/keto reductase family oxidoreductase [Ruegeria pomeroyi DSS-3]
MTATLTTPDGRPASAFAFGTMQFGGRADAAASAAMYAACRAAGISHFDTAYVYTDGRSETLLGGMIGAER
DRLLIATKVGYLGGAGAANIRAQFDICRQRLGLDMIDALYLHRFDPDTDLNETMECLARLRDAGQIRYVG
LSNFAAWQVMKAVAVAGLFDLRIDLLQPMYNLVKRQVEVEILPMCADQGIAVAAYSPLGGGLLTGKYVGG
GAGRLTEDDRYGARYGLDWMPRAAEGLVRIGAELGVDPATLAVAWVAASPLGAQPIISARSAEQLRPSLA
AMNYEMPPELYARLTALSPTPPPATDRIEEQA
>gi|56695549|ref|YP_165899.1| hypothetical protein SPO0644 [Ruegeria pomeroyi DSS-3]
MNHKPFRERDLSTSNIHPMASEHLPRYIVAADGSDYLFTVMAVFTVGLILLIGVGYFTLHALPERMAHKN
NHSQFQLVGILALLALFTHNNVFWVAAVLVAGFQIPDLAAPLRAISDAIRGLGKTEDQGNATPSERAPEP
TPHPAAATEGH
>gi|56695550|ref|YP_165900.1| multidrug resistance efflux pump, putative [Ruegeria pomeroyi DSS-3]
MLETILCALVTLLPDYLFRRYVQGKRIGHELTLFSVWYELRWGLTSCAMLTLMVITTLFYFHPATNAVTS
YFRTVTILPQVGGRVEEVYVENNQPIEAGQPILRLESLSQQAGVEAAHAGIAQIEASRKLALTDLAMADA
GIAQARAALTQAQEDLARNQTLKDQGSSAVRLTEIERLDNLVSEREALLQAAEAGKAAAQQQIEVLIPAQ
MASAQAQLELAKAELGKTLVVAGVDGRIEQFGLQVGDYVSPLLRPAGILVPSHSGRGRFQAGFNQMAAQV
IKPGMIGEIGCMTKPFTIVPMVVVAVQDVIPSGQIHPTDVLRDPARNLMPGSVTVYMEPLYEGGADLLPP
GSACLANVYTNNHYRLAHDTDMGGFERVFLHVVDTIGVVHAAGLRLRVLLMPVQSLVFSGGH
>gi|56695551|ref|YP_165901.1| hypothetical protein SPO0646 [Ruegeria pomeroyi DSS-3]
MKPMSSPDRTCPSARCAPGNQLLGVKGPDGHVRHLRSSMTIDADFVETASAHGKPEARMRFSSPCATSGC
AQWTGSRCGVIDHVLSHLEQAQVPLADHLPPCPIRASCRWFDQTGEIACRACSMVITDQSAIAAE
>gi|56695552|ref|YP_165902.1| hypothetical protein SPO0647 [Ruegeria pomeroyi DSS-3]
MRADVFCPCPARIFRGGIFIKETDMARFVVDTGDLEMDKSTEMELQGDIQKLVLGHIARTGFEKPWVTKF
PREWYGIILHPDLGPLLEREKQLGGMLARLG
>gi|56695553|ref|YP_165903.1| bmp family protein [Ruegeria pomeroyi DSS-3]
MKFTSLLASAAMALGLATGAMADDKTKVGFVYVGPVGDGGWTYEHDKGRQAVEAEFGDKVETVFVESVPE
GPDAERVMTQMALEGADLIFTTSFGYMDPTINVAKKFPKVKFEHATGYKQAENVSVYSARFYEGRAVQGT
IAGRMTKSNIVGYIGSYPIPEVIRGINSAFIHARKVNPDVQFKIVWAYTWFDPAKEADAAKVLIEQGADV
ILQHTDSTAPQAAAQAAGNVITFGQASDMSEYAPMPRVSSIIDNWAPYYIARTKAVMDGTWTSVSTWDGI
GAGMVGIGEISDAVPADVKAEALALKDALANGSYHAFTGPLKKQDGSDWLAAGETADDGTLAGMNFYVEG
IEGDIPN
>gi|56695554|ref|YP_165904.1| sugar ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MDLSAINPVLLVASLMVAATPLLLAAIGELVVEKAGVLNLGVEGMMITGAICGFAISVETGSPWLGFIAA
AIGGAILSLLFVLMTQVALANQVASGLALTLFGLGLSALMGQSYVGIKPPAMGRLDLPVLSDLPVVGPIL
FSHDPILYLGILLTAGVWWVLKYSRAGLILRAVGENHDAAHALGYKVIRIRILAIMFGGACAGLGGAYIS
LIRVPQWTEGMTAGVGWIALALVVFASWKPWRALLGAYLFGGVTVVQLNLQAAGVAIPVEYLAMSPYLIT
ILVLVILSADKSGAPAALGRSFHASH
>gi|56695555|ref|YP_165905.1| sugar ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MIVLEKRPQPSRAWSLATPLVAVLATMFFGGLLFAALGKNPVEAIGTIFWEPLFGEYSFYYRPQLLVKGA
PLVLIAIGLSLGFRAGIWNIGAEGQYIMGAIVGAGVGLAFYPMEAFYVFPLMVIAGALGGWAWAMVPAFL
KVRFGTNEILVSLMMVYVAEQLLASMSLGLLKNPEGFGFPGSRNLQSYASAHNAELIEGSGMHWGVVAAL
IAVIFAYVLLNRHMTGFHIRLTGEAPRAARFAGVKPARLILFCLGVSGALAGLAGMFEVSGPSGQVSIDF
NVGYGFTAIIVAFLGRLHPVGILLAGGLMALTYIGGEIAQGSLGLPAAAIQVFQGMLLFFLLALDLLTNY
RIRAARKEVA
>gi|56695556|ref|YP_165906.1| sugar ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MSTPLLSIKGLTKAYPGVVANDNVSFDIGEGEVHALLGENGAGKSTLVKMIYGLVKPDSGTMSLRGAPYA
PPEPRAARADGIAMVFQHFSLFDALNVAENIALGMENPPAMGDLAARIREVSETYGLPLDPFRTVGDLSA
GERQRVEIIRCLLQDPKLLIMDEPTSVLTPQEVEILFQTLQKLRSEGTSILYISHKLEEIRTLCDHATIL
RLGKNVGECTPAETSARDMAEMMVGTALKTPERSGREFGEIALDISGLSVPSPSEFGTSLKNVHMTVRKG
EVLGIGGVAGNGQDELLAVLSGEILTAADAVKKDGQPVGRLGPVARRRLGLLTAPEERLGHAAAPNMSLT
ENALLTGSVREGLESNGFLKWAETREFAERIIKEFDVRTPGPENAARSLSGGNLQKFVIGREVLQNPDVL
VVNQPTWGVDASAAAAIRQALLDLAAKGAAVVCISQDLDELMEISDTFAALNEGRLSAPRDTTGLTVDEI
GLMMGGAHGMEVAHV
>gi|56695557|ref|YP_165907.1| xanthine dehydrogenase accessory factor [Ruegeria pomeroyi DSS-3]
MAFDLEGLRAAVAAHGRVTRVVIAAIRGSSPREVGAAMLVWENGQSGTIGGGALEFQAAEAARAGRLGLS
RHALGPELGQCCGGAVTLLTESWDAARLDTVEGTVVARPALPFSGTENGPETLQVSGAPLALRRLLAQAR
GQGVLPKAQLVGDWMVEPVLRPARQLWIWGAGHVGRALVDVLSPLPEIAITWVDTGVERFPETIPAGVTP
LPAAQPADLVGYAPKEAEHLILTYSHELDLELCNRLLRHDFAFAGLIGSATKWARFRSRLAALGHGPQQI
ARITCPIGDPALGKHPASIAIGVAARLLSPAHSETTRKELSA
>gi|56695558|ref|YP_165908.1| xanthine dehydrogenase, B subunit [Ruegeria pomeroyi DSS-3]
MSVAKPLPHDAAPLHVAGTARYVDDIPTPRDTLHLAFGLSTIAKGRITAMDLDAVRKAPGVVRVMVADDL
PFANDVSPSAHDEPLLSDGTVHYVGQPLFVVVATSHLAARKAVRRARIDYAEEPAILTIEQALAANSRFE
DGPRIYEKGDAEAAISGAAHVIEGTFELGGQEHFYLEGQAALALPGEGGDMLVHSSTQHPTEIQHKVAEA
LGVPMHAVRVETRRMGGGFGGKESQGNALAVACAVAARATGRACKMRYDRDDDMVITGKRHAFRIAYRAG
FDAEGRIQGVSFLHHAICGWAQDLSLPVADRAMLHADNAYLLPNARIESHRLKTNTQSATAYRGFGGPQG
MVGIERVMDHAAHVLGIDPVELRQRNYYAAPVGGAAPHIPRSISNQKEANTTPYGQVVEDFELHGMTEAL
LTSSDYAARKAAVAAWNAANPIVKRGIAFSPVKFGISFTLTHLNQAGALVHVYQDGSVHLNHGGTEMGQG
LFQKVAQVAASRFGIPLEMVKITATDTAKVPNTSATAASSGSDLNGMAVKAACDTIRDRMAAYLAERHQA
EVASVRFGNGHVEVGEARYSFAEAAALAYQGRISLSATGFYKTPKIEWDRIQGRGRPFYYFAYGASVTEV
AVDTLTGEYRILRADILHDAGASLNPDLDIGQVEGGYVQGAGWLTTEELVWDDHGRLRTHAPSTYKIPAC
SDRPEVFNVALWDGQNREDTIYRSKAVGEPPFMLGISAWLALSDAVASCGDAYPALNAPATAEEVWKGIR
RLGDGV
>gi|56695559|ref|YP_165909.1| xanthine dehydrogenase, A subunit [Ruegeria pomeroyi DSS-3]
MDISFLLNGETVTLAGVDPTATLLDWLREARGLTGTKEGCNEGDCGACTVMISDAESSRALNACILFLPQ
LDGKAVRTVEGLGGTHPVQQAMVTHHGSQCGFCTPGFVMSMAASHAEGATDHDTQLAGNLCRCTGYAPII
RAARAVEDAPKPDWLATDRAFISPEILRGEAAGRGAEPPAAPTSSNELAALYDAHPDATLVAGATDVGLW
VTKQLRELPKVIFLSGCADLKDIEITDTHVRLGAMVDMNRMRDALAPLHPSYGEMIRRYASVQVRNAATV
GGNIANGSPIGDNPPALIALGATLHLRKGDTRRDLPLEAFFLDYGKQDRAPGEFVEAVSFPRQPDRLKCY
KLSKRFDQDISAVCGCFNITVEGGTVTAARIAFGGMAGIPKRASAVEAALIGQPWTQQVVNAALPEFERD
FTPMSDMRASARYRMETAKAMLSRYFAEDQGHLANVLEVRA
>gi|56695560|ref|YP_165910.1| hypothetical protein SPO0655 [Ruegeria pomeroyi DSS-3]
MDLFLTFALVGFFAQLADSALGMGFGVISASVLLAQGVPPPLVSASVNAAKVPTGIVAGLSHALNGNIDK
ALFMRLALSGAAGGLVGALILGELKRPVLTVIIASYLLLIGGLILWRGLSGRAPRLLATGRISVLGATGG
LIEGIGGSWGPVVTSGLIGSGHEPRRAIGSSALAELAVSLTVFLALMAGYHLGRWGTGRDLHEVLLPVAG
LVAGGVPAALVGGRLAAVLPRRPLTVAVGLLAIAIGLQRLASLL
>gi|56695561|ref|YP_165911.1| DNA polymerase III subunit alpha [Ruegeria pomeroyi DSS-3]
MSSNPRFIHLRLHTEYSLLEGAVRLKKLPALCDKMGMPAVAVTDTNNLFAALEFSVGASGAGIQPIIGCQ
LDLAYVAAMPGERPKPPAPLVLLAQNEAGYENLMKLNSCLYVDKGGQLPQVTLEELEALGDGLICLSGGP
DGPVGRLLQAGQRPAAEALVDRLAAIFADRFYIELQRHPGEGGAPEAERLTERGHVEMAYAKGLPLVATN
DVYFPEAGMYEAHDALICIADGAYVDQAEGRRRLTAQHYLKSPQEMATLFADLPEAIENTVEIARRCAFM
AYRRDPILPKFADDEVVELRRQANEGLQARLAVIPHAVSAEDYQKRLDFELDIIEGMGFPGYFLIVADFI
KWAKDHDIPVGPGRGSGAGSLVAYALTITDLDPLRYSLLFERFLNPERVSMPDFDIDFCMDRREEVIRYV
QEKYGRDKVGQIITFGALLSKAAVRDIGRVLQMPYGQVDRLSKMIPVEGVKPVSIEKALKDEPRLREEAR
NEEVVDRLLTYGQQVEGLLRNASTHAAGVVIGDRPLDALVPLYQDPRSDMPATQFNMKWVEQAGLVKFDF
LGLKTLTVIQNAMDLIFKSGRPLHVAADGRQLYDPAEGAENQINAIPLDDVPTYKLYSAAKTVAVFQVES
SGMMDALKRMKPTCIEDIVALVALYRPGPMENIPVYCEVKNGLREITSVHPLIDHILEETQGIIVYQEQV
MQIAQVMAGYSLGGADLLRRAMGKKIKEAMDAERPKFETGAAENGVDAKKASEVFDLLEKFANYGFNKSH
AAAYAVVSYQTAWLKANHPVEFMAGVMNCDIHLTDKLAVYFEEVRKGLGLPYVPPCVNRSQATFDVVGGE
LVYALGALKNVGVEAMRLVVEGRQGAHPPEPASSRDAARRPDRAEERPFVTLFDFARRVDLKKVGKRPLE
MMARAGAFDQLDPNRRRVFDSIEALMAYSGAIFEQKSSNQVSLFGEAGDDLPEPRLAQAPDWLPAERLSE
EFKAIGFYLSGHPLDDYMPALKRKGVLTLDEVTEQARSGPVLAKMAGVVAGRQERKSARGNRFAFAQMSD
PTGAFEVTLFSEVLEKSREFLETGSHVVLTAEATMEADQLKLLARSVGPADAVVAEAGATGLRVFMDNAG
AVETVAHILAEAAQAARNAARGPVQLCLMDPGLPGEVEMDLGQEFPLNPQIKGALKSLDGVVDVEEM
>gi|56695562|ref|YP_165912.1| CobW/P47K family protein [Ruegeria pomeroyi DSS-3]
MTPLPVTVIGGYLGAGKTTLVNHLLRHAAGRRLAVLVNEFGDLPIDADLIEAEEDGMISIAGGCICCSFG
SDLIGALNDLAAMEPRPDHILVESSGVAIPGAIVSTMLLADGIRSDGIVVVVDGETVRQRAQDDYVGDTI
TRQLSDAEIVVVNKTDLLAHAVQTELMEWLAEAAPGAIAIPAERGRVAPGALLGVLPAPGTGQPAHHSDR
LFDSLVLAPEGGQPIERLARDLATGPHGVIRAKGYLRDIEGALWLIQTVGRRWEVTPAQGPHQTGLVCIG
FRDRLDRSGLAALAGATV
>gi|56695563|ref|YP_165913.1| amidohydrolase domain-containing protein [Ruegeria pomeroyi DSS-3]
MAETIIYAARKIITMAPSRPEVSHVAVRDGRILGIGTLEELASWGDYRLDDRFAGKVLMPGFVEGHAHTM
EGTLWRNVYVGWFDRMDPEGRVWPGLKSIDAVVARLREAEAQMSGPETPLAAWALDPIYMENRRVTRLEL
DQVSTTRPIGILHASGHIMNVNTRALELAGLMKPGVNHPGIPLGEDGLPLGPLYGPDAMTPVGPHVGFDR
AMTDCDERGLRDYGKLCVRAGVTTCTDLAARLTDDSVDMMLRVTGEEDYPACIVPLRVFFGMSAEEIVDY
CVSLKPRSTERLRLGRIKAVADGSIQGFSARLRWPGYYNGAPNGLWYTAPEQMSELYHRALAAGLQVHTH
TNGDQATQMALDMLEPALKAHPSPDHRFTLQHCQMADAAQFRKMRSLGMNVNLFANHHFYWGDEHYRLTV
GPERACRMNACRTALDTGVPMAIHSDAPVTPLGPLFTAWAAVNRITASGRVQGEEERISVSEALYAITLG
AAYTLHMDGEVGSIEVGKRADFAVLDSDPTQADPMALKDIGVWGTVQGGRIFPASAL
>gi|56695564|ref|YP_165914.1| LysR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MLNFTLKQLRYVEAADRSGSIAKAAEELNISQSSITAAIDALESGLGFDLFVRTPARGIRTTASGRDALG
LIRRFIHRSRQFEEELSSLGGLTRGTVRIACYATAAPSFLPPVLRAITEGFPDLSIQLLEGNMARIMEFL
DEGEADVAFTYSEVLSERCDFEPLFDAPPYAMVPVDDPLAGQASTTFAELATRPMVMLDLPHTRDYFVGM
FEALGLTPNIAHSTRSSEIVRALVAGGFGFSLLNIRPVDYRESESRYRIVPISGVPHTPVFGIATMAGAQ
QTRMVRAFVQSCIELRDRGVFEDLVVRCPR
>gi|56695565|ref|YP_165915.1| peptide ABC transporter, periplasmic peptide-binding protein [Ruegeria pomeroyi DSS-3]
MKHLFKGLIAATAVASVLVGTTATAEEPRRGGTLKTQLGNNLRTLNSAVQSGIVTGFPGAQLFASPLRYD
DSWTPQPYLAESWEVSADGLKVTLNLVKNAVFHDGHPITSSDIAFSVKVIQEAHPFKSMFAPVTSVDTPD
DHTAVLNLSHPHPGLMLAMSGQLMSIIPEHIYGDGQDFKTHPRNIENVVGSGPFKLAEYKNGEHVILERF
DDFFIEGRPYLDKIVMRIITDSSARAIAYENGELDFGAFESEPLIINRLKKVDHLTVTPTGYGAIGALDW
LAINTTKGPLADKRVRQAIAYAIDKNFIQNALMQGTVQDSNTGIHPDSPFYNADVNAYALDLDKANALLD
EAGYPMKGDERFAVTIDYGWPSAKPHVEYVRAALKKVGINVEVRASADFPTWAKRMGTMDFDLSWDAVFN
WGDPSIGVHRTYLTSNIAKGVWSNTQGYSNARVDELLDMAGKENDPEKRKALYAEFQSIVNDEVPIYFVQ
TLPYHTVYSNKVMNAPVNGIWSTSSPLDQVWLKE
>gi|56695566|ref|YP_165916.1| peptide ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MNFLRVTLIRILYAALLLVAVLVLNFSLMHAAPGDVADTIAQAAGGIDAEALEQIRREYGLDQPFLVQLG
RYIGNVLQFDLGYSYFYSDKVTNLILSRLPATLLLVISAQLLALVVGVVLGVFSARKPNGILSHFVTFLA
LFGYSAPVFWTGLLMLVMFSLMVPLFPVAGMRDVTVEGGFFVQALDIAHHLVLPMLTLASIFLALYSRLS
RAAMMEVLGSDYVRTAKAKGLSPRQVVYKHALKNALSPVITLAGLQLSAVVSGAVLVETVFSWPGLGTLA
FQSILARDTPLILGILFFSALVVIVGNLLTDLALRLVDPRVGGKR
>gi|56695567|ref|YP_165917.1| peptide ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MSEPVTLPEEAPEQARHPFAEAWEMFRRNHAALVALVLLVLICVLALIGPALYGRDPYDMVWAPFTRPGE
NWDFILGTDYLGRDLLAMIISGARVSIIIGLSAAFVSIFIGVTVGALAGFYRGWVEEALMRFTEFFQVLP
TLLFSMVIVALFGASLPMITFAIGVVSWTAVARITRAEFLRIRELEYVTASRASGAKNAKLMFRVILPNA
LPPIIVQSALMVGSAILFEAGLSFLGLTDPNVVSWGQIIGSNRTYFLDASFTVTIPGVAIFVTVLCISLV
GDGLNDALNPKLRAR
>gi|56695568|ref|YP_165918.1| peptide ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MHLAGGRRAQRCAQPETEGALMTEALLKVENLRIELTTRAGVAPVIDNLSFELGHGENISFVGESGCGKS
MTALAIMGLLPEGVGRVASGRILLEGEDLTAASDSRLRDIRGNEISMIFQEPMTSLNPVYTVGEQIAEVL
RAHQGLSARAARDMAADLLDAVRIPNARARAGDYPFQMSGGQRQRVMIAMALACRPKILIADEPTTALDV
TVQAQIFDLLRDLRRDTGTSIILITHDMGAVAEMAERMIVMYAGRNAEIGPVDQIIEHPRHPYTKGLISC
VPHIMATLTEDRPDLTEVPGIVPGLREFGQDRCLFASRCAYRTEQCLRQRPPAMGFDNGQLADCWHAETL
>gi|56695569|ref|YP_165919.1| peptide ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MTDRPLLDVENLTVRFAVRRGGVFGRKQYLDAVDGVSFALARGETLAIVGESGSGKTTTALAVARLVAAH
SGRVELDGADILGLEGEALRQVRRKVQFIFQDPYSSLNPRQRAEDVVREPLQSLTDMSRDDQQKVIDELF
VQVGLRPEQKRLFPHQFSGGQRQRIGIARALATRPELIICDEPVSALDVAVQAQILNLLRRLQKEFGLTY
LFISHDLGVVQHMCDSIAVMYMGRIVEHGPRLSLFNNPLHPYTAALLSAVPSVDKARRAATRRILIPGDP
PDPVNLPPGCRFANRCPVAQPQCRAREPSLRTVSGGQRVACHLVGEDGTAPL
>gi|56695570|ref|YP_165920.1| SlyX protein, putative [Ruegeria pomeroyi DSS-3]
MTHLEERIAHLTRTVDELSDVVARQQDEIDRLTRRVAMLWQREADRSQEGSGGVILGDERPPHY
>gi|56695571|ref|YP_165921.1| enoyl-CoA hydratase [Ruegeria pomeroyi DSS-3]
MSVIIDSAEGVTTITINRPEARNAVDPDTARALYQAFLDFEGDSDQRVAILTGAGGAFCAGFDLKSAGSG
AADAWITSLDLPAGWDDPISDPRPGPMGPSRLMLSKPVIAAIEGPAVAGGMELAAWCDLRVMAQGAVAGV
FCRRWGVPLIDGGTVRLPRILGQGRASDLILTGRAIAADEALAMGFANRICPKGQALAMARELARELTRF
PQACMLADHLSARMAPADLAAALSREWRSTATFAAEGRAGAARFAAGKGRGGDFADI
>gi|56695572|ref|YP_165922.1| histidyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
MAKPKKTPRPKAETPKGFRDYFGAEVTQRTEMLRDIAGVYHRYGFEALESSAVETVEALGKFLPDVDRPN
EGVFAWQESEDDGAGDWMALRYDLTAPLARVYAQHRNDLPTPYRRYAMGPVWRNEKPGPGRYRQFYQCDA
DTVGSASMAADAEICAMLSDTLETVGIPRGDYVVRVNNRKVLNGVLETMGLADEGQRDAVLRTIDKFDKV
GEDGVRELLGKGRLDASGAFIDGVGLSDDQAGPVLAFLTSRGADAATTVANLRAAVGASQIGVQGIDELE
QIGDLLAAGGYGPDRIVIDPSVVRGLGYYTGPVYEAELTFEIFDEKGRKRQFGSVSGGGRYDDLVKRFTG
QEVPATGVSIGVDRLLAALREKGRIRTAERGPVVVTVMDRDRMADYQAMVAELRNAGIRAEVYLGNPKNF
GNQLKYADKRNSPVAVIEGGDERANGVVQIKDLILGAQIAANATLEEWKERPSQYEVARADLVAKVREIL
AEQAG
>gi|56695573|ref|YP_165923.1| ATP phosphoribosyltransferase regulatory subunit [Ruegeria pomeroyi DSS-3]
MITRARILEQAARLRAGFEAAGAQGVETPILQPAETLLDLYGEDIRARAYVTSDALRGEQMLRPDFTVPV
VQKHMEHGAEPARYTYAGEVFRRQEHDPDRANEYIQVGYEVFDRTNPAAADAEVFALIAQALDGLALRAA
TGDIGILMAAVEGLKTTEPRKAALMRHIWRPRRFRALLDRYAGRTTVPPARAALLAESEPLADGAPEIGK
RSRAEVEARIEVLRADAAAAPISDNEMAGLDALLSVRETMPYALEHLRDIAVDLPQITPALDRLEARIAA
LRARGINVDRLDFEASYGRTSMEYYDGFVFGFYAERRPDLPPIATGGRYDALTRRLGNGAEIPAVGGVLR
PGLMLLLAEAET
>gi|56695574|ref|YP_165924.1| ATP phosphoribosyltransferase catalytic subunit [Ruegeria pomeroyi DSS-3]
MSLKLGVPSKGRLMEKTFAWFDKRGITLSRTGSDREYAGRVDGIEGVSLVLLSAGEIPRELAAGRIHLGV
TGTDLVHEKLPLWDQQLEELAQLGFGQADLIIAVPACWADVDTLDDLDAAAAGFRARHGHRLRIATKYHR
LVRDFLTDAGVADYTLVDSQGATEGTVKNETAEAIADITSTGETLRANHLKILSDGLILRSQATLWRSRT
APLEAADKQVLELLLDRLAK
>gi|56695575|ref|YP_165925.1| DNA polymerase III, alpha subunit, putative [Ruegeria pomeroyi DSS-3]
MTYAELCVTTNFTFLTGASHPEEMITRAAELGLHAIAITDRNSLAGVVRAYAALKELRREADEAIRIRSQ
HRIDSCSRQEVGHPQPIARPEAPRLPRLITGCRLVLRDSPLHWIALPRDRAAYQRLTRLLTLGKRRAEKG
DCHLDLADLLAGCTGMILIALPQGRLDGALPHLQQVQRRFPGHVFLGAAPRYDGSDQAWLAACARLALRS
SAPMVAVGDALMHRANRRQLADVLTCMREHITIDRIGTRALPNAERRLKGHADMARLFRDHPAALRRTLD
IAARCSFCLSELSYEYPDEVAEGETPQARLERLTAEGIVRRYPGGAPQRVHELVAKELKLVAELGFPAYF
LTVHDIVQFARSQGILCQGRGSAANSILCYLLGITDVSPDQIAMVFERFISKYRGEPPDIDVDFEHERRE
EVIQWIYQRYGRHRAGLCATVIHFRSRAAIREVGKVMGLSQDVTASLSGQIWGQSNGGADPERMRELGLD
PEDRRLALTIRLIGEIIGFPRHLSQHVGGFVITRGRLDELAPIENAAMEDRTLIEWDKDDIDTLGILKVD
VLGLGMLTCIRKAFDLMREHEQRHLSIDTVPQEDAATYDMLCAADAVGVFQVESRAQMNFLPRMRPRTFY
DLVIEVAIVRPGPIQGGMVQPYIRRRQGLEKAEPFGPELAAVTARTLGVPLFQEQALQIAVVGAGYTAEE
ADHLRRSLASFRRMGTIGAHRDTFIAGMRRNGYSQEVAERCFGQIEGFADYGFPESHAAAFAMLAYVSAW
LKCHHPAIFACALLNAQPMGFYAPAQIVRDARDHQVELRPICVNASDWDNRLERRADGALALRLGFRQIK
GFREEDAAWIVAARGNGYPDPQALWLRAGVTPAVLERLAEADAFADMGIGRRDALWQVRAIRGQAPLPLF
NDPLDGEIIHEPQVTLPAMHLGEEVVEDYVSMRLTLRAHPMELLRPAIPGLTPHDKLASVAAHRVSVCGL
VITRQRPGTASGVIFLTLEDETGVSNVVVWPKIYEQFRRIVMGGRLLRVTGTLQREGIVVHLIAQRIEDL
SPRLADLGHPMDSAVGQTTPQTDSAPRPRPQPRAMHPREQAKRLFPSRDFH
>gi|56695576|ref|YP_165926.1| hypothetical protein SPO0671 [Ruegeria pomeroyi DSS-3]
MKQANADRLYCLDTGAERAGLHCGMAYADARAFCPDLQTRPADPAGDARFLRMLRRWATRYCPWVGLEGR
DGLVLDITGAAHLFGGEAMLLSDMRQRLVRAGLAARIGLADTRGAAWALAHHGEGRTEPGQPLAALEHLP
VAALRLSEEAVTGLTRLGLRRIGELERTARAPLTRRFGPELLLRLDQAMGRQPEQISPLAEPPHYGVRLT
LPEPIGLFDDVMAGTGRLLDQLCARLKAQEAGARSLCLTLRRVDQEAQTVELRLARPLRDAARILPLFER
GVREVDAGYGIDQMRLEATRVEPQPVRQLSHVSSGRADRLDDLISRIGTRIGLENIQRFLPVDSHIPERG
FTIAAAAWSEPGGPWAPPRPRPILLFPPEPLTATGTRPPERFRWRRMSLSTARATGPERIAPEWWLPDEN
WRGGVRDYWHVETRQGRRLWLFHTPQNPGWFVQGEFA
>gi|56695577|ref|YP_165927.1| hypothetical protein SPO0672 [Ruegeria pomeroyi DSS-3]
MSSLNASFPLRPGRVHEACGPLAVAMAAVAAAQVSGLLWLRESWRPELINPLGLADYFDPARLLLAQTRD
QTDTLAVAEESLRDGALPLVVIELSAPLSLTAGRRLQLAAKDGKTTGLCLIPEGMGSNAAETRWHCAPVF
DPSDSTLMRWEIIKNKSGTLGAWHVRWNRASRRLDLVSPAGKRPGPAGAPG
>gi|56695578|ref|YP_165928.1| taurine--pyruvate aminotransferase [Ruegeria pomeroyi DSS-3]
MDGTFNENDLSRVVEADRAHIWHHLIQHKPFETNDPRIIVEGKGMRVWDQNGKEHLDAVSGGVWTVNVGY
GRESICKAVYDQLMKLCYFANSAGSIPGALYAEKLISKMPGMSRVYYTNSGSEANEKAFKMVRQIAHKKY
GGKKTKILYRDRDYHGSTLAAMSAGGQDERNAQYGPFAPDFVKVPHCMEYRKEELGLGHLSGAEFGRAAA
DLIEEVILREGPETVGALCLEPVTAGGGVITPPEGYWERVQEICKQYDVLLHIDEVVCGIGRTGTWFGYQ
QYGIKPDFVTMAKGVASGYAAIACMVTTEEVFDLFKDNTDDPLNYFRDISTFGGCTAGPAAALENMRIIE
DEDLLGNCTAMGERMLGNLHALMEKHAVIGDVRGKGLFLGAELVANRETKEPVSEKQAQAVVADCMAQGV
IIGVTNRSIPGRNNTLCFSPALIATAEDIDAITDAVDQALTRVFG
>gi|56695579|ref|YP_165929.1| taurine ABC transporter, periplasmic taurine-binding protein [Ruegeria pomeroyi DSS-3]
MMTAKTKLLGAVAGLALAIGAMPAAVAAEGEITVAYFLEWPMPFEYAKQKGTYDEVLGVKVNWVSFESGV
KMSAAMASGDVHLSVSQGVPPFVVATSAGQDLQILDVAVSYADNDNCVVRSELEIDKDNAGELAGKKVAV
PLGTAAHYGFLKQMNHFGVDVASMDVVDMDPPDGAAAIAQGAVDMFCGWGGSLRRALEHGNVLLTGDEKT
ELGILVFDVTSGPAGWVAENSDLVAKFLKVTADANAMWADEANRAEMLPLIAKDAGMDEEATASTIATFK
FPTIEQQLSGGWLGGNAQTFMKGVADVFVEAGSIDSALDTYENAVNTGPLSAAGGM
>gi|56695580|ref|YP_165930.1| taurine ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MSGLSIENISMRFDLPNGSSVQALKNVSLHLKEGELMSVLGPSGCGKTTLLNIVAGFLAPTEGHIAMNGH
KVHGPNAERGMVFQQGALFEWMNVRDNVSFGPRMKGQRASQYGSHVDHLLDVTGLGDFKDKAIYELSGGM
QQRVALARCLANDPDVILMDEPLGALDALTREKMQGLVLKLWKETGKTIILITHSVEEALLLGERLLVMA
PRPGRIHKEYRLPYADMGVNADLREVKKSEGYSQTREEILSMIWDMEEEIMGRTEAAQ
>gi|56695581|ref|YP_165931.1| taurine ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MTASRSTTIIFDKNDETSRKEGAKIVAIDGTPISIGQSIKTAAGQFSLTDKGAISFQPPSGLQMEPIWLP
PPEAVVSRLGEIAKSGYRDSTLWEHLGFSLFRVIAGFFFGALVGIPLGYAMGLSDWFRGWFDPIVEFMRP
VPPLALIPLVIIWAGIGETGKIILLFLAALWIMAIAARSGVSGVRISKVHAAYSLGASKAQIMRYVIVPN
SLPEIFTGARVAMGVCWGTVVAAELVAAEKGAGMMIMVASKFQLTDIVIMGIILIGVIGFGIDILMRWAE
RVLVPWKSKG
>gi|56695582|ref|YP_165932.1| acyl-CoA synthetase [Ruegeria pomeroyi DSS-3]
MTGSTIYDQHLDRTPANFTPLSPLSYIERTAAVYPDYPSVVYGDRRYTWAETYTRCRRLASALAGRGLGK
GDTVSIIAANIPEMYEAHFGVPMAGAVLNAINTRLDAPIIAFILSHAEARVLIVDPEFSEVVRDALAQID
RPDLLVVDIEDPSFAGGAPVGTLSYDALLAEGDPDFDWSLPGDEWDAIALNYTSGTTGNPKGVVYHHRGA
ALNATSNILTWGMPQHAVYLWTLPMFHCNGWCFPWTMAANAGVSVCLRAVRDEPIYRAFREEKVTHFCGA
PIVLNMLANAPDHMKDFDHQIKVMTAGAPPPAAVIEKMEAMGVDVTHVYGLTETYGPSVVCAWKEEWDGR
PGAERAALKVRQGVRYVALSGLMVADPETLEPVPADGETMGEIFMQGNIVMKGYLKNPDATDRAFRGGWF
ASGDLGVMHPDGYIALKDRSKDIIISGGENISSVEVEDVLYKHPAVMEAAVVARPDEKWGETPCAFVELK
PGQSVEAADLIAHCRANMAHFKAPKTVVFGELPKTSTGKIQKFLLRERARAL
>gi|56695583|ref|YP_165933.1| agmatinase, putative [Ruegeria pomeroyi DSS-3]
MASHGYDSGRLNLPFVGICTFGKYPYVEDWDSIDADAAILGAPFDFGAQWRSGARMGPRAIREASTLFSF
GHAGAYDFEDDITYLDPAKVRIVDIGDADIVHTDTIKSHANIEFGVRKILQAGALPVVLGGDHSINIPCI
NAFDDQDPIHVVQIDAHLDFVDERHGVRYGHGNPMRRAAEKAHVTGLTQIGIRNVSSTAKDGYDAARAMG
SDIQSVRHVRRMGTAAMLARIPEGVRYYLTIDIDAFDPSIAPGTGTPSHGGFLYYEVLELIDGLARRGEI
AGIDLVEVAPDYDQSGSTSILAAQLLMNTLGRVLHHRRR
>gi|56695584|ref|YP_165934.1| maleylacetoacetate isomerase [Ruegeria pomeroyi DSS-3]
MTETILYDYWRSSASYRLRIALNLAGIAYTAVPVDLVKGEHRSAEHLARNPQGLVPVLDIDGLRLTQSLA
MLDYLDQTRGLGLVPADPASRAQVQALAQAIAVDIHPVCNLKVARHATQLSGGAEDMPGAWMRHFIRPGL
QAFETRLAGFEQSPYCCGDAPGLADICLMPQIYNARRWEVDISDLPRLLSVEAACNEHPSFSAAHPDRHA
PVA
>gi|56695585|ref|YP_165935.1| glyoxalase family protein [Ruegeria pomeroyi DSS-3]
MKIEKIHHVAYRCKDAKETVEWYGKMLNMDFILAIAEDHVPSTHEPDPYMHLFLDAGNGNVLAFFELPTK
PEMGRDPNTPVWVQHIAFKVKDRETLIEFKEHLEANGVEVLGVTDHSIFHSIYFFDPNGHRVELACPDPE
EEALLKRMDEVKWDMLEEWSRTKKAPQHAAWLHAKELNKTV
>gi|56695586|ref|YP_165936.1| hypothetical protein SPO0681 [Ruegeria pomeroyi DSS-3]
MSDLTLTPNIAGADDFYAELLAAHDGLDKAESDALNARLVLVLANHIGDRAVLSKALKAAAFKE
>gi|56695587|ref|YP_165937.1| FAD-dependent oxidoreductase [Ruegeria pomeroyi DSS-3]
MRPRPTGCAQTWEERPMNKIFEVPLYAYARSPDQDASSPVRHKVIVIGAGPIGLAAAIDLAQQGIEVVVL
DDNDKVSFGSRAVCYAKRPLEILDRLGCGQPMVDKGVEWNLGKVFFDDRQVYDFNLLPEGGHQRPAFINL
QQYYFEEYLVNRVRELQETGAPIEIRGRNKVEAIGTHPDHVKLEVETPEGSYTVEADWLIACDGAGSPVR
SMLGLDFVGRVFEDNFLIADVIMDAGFPTERWFWFDPPFNRGQSALLHKQPDNVWRIDLQLGWDIDKERE
KRPENVIPRLKAMLGEDVQFELEWVSIYTFQCRRMEKFRHGRVLFAGDAAHQVSPFGARGANSGLQDTDN
LIWKLKLVMEGKAPESLLDSYDMERVHGADENILNSSRSTDFITPKSEMSRILRDAVLDLSEQYEFARPL
VNSGRLSVPCTYDGSPLNSADALLDGPARTRPGSPCPDAPLGDGFLLPKLGDRFILLTIDADAPDSIEEE
GVEVTRLALSVKDDPTMELKRRYLGDNDSAVYLIRPDQHVAARRATFDETQFRHAIRRATGKE
>gi|56695588|ref|YP_165938.1| metallo-beta-lactamase family protein [Ruegeria pomeroyi DSS-3]
MAKAFASQGDMSEKKISFTEVGEGLYAFTAEGDPNSGVIIGDDSVMVVEAQATPRLAQKVIDCIREVTDK
PISHVVLTHYHAVRVLGASAFGAGQVIMSDTARSMVVERGQEDWDSEFQRFPRLFEGHESIPGLTWPTTT
FSDSMTVYLGKRRVDIMHLGRAHTAGDAVIHVPDQNVMFTGDIVEYHSACYCGDGHFNDWGNTLDNIAWF
DVDAIAPGRGDALVGKEMVNAAIENTRDFVQSTYRPAARVAARGGSLKEAWDAVRAECDPKFADYAIYEH
CLPFNVARAYDEARGIDTPRIWTAQRDLEMWEALQG
>gi|56695589|ref|YP_165939.1| glyoxalase family protein [Ruegeria pomeroyi DSS-3]
MTLSLDHIQIAIPAGGEDAARAFWCAGLGLAEIAKPDALKARGGLWLALNGAELHLGVEPDFTPARKAHP
GFAVIDIDAVAARIEALGQSPRWDDTIENRRRFFAEDPFGNRLEFLERD
>gi|56695590|ref|YP_165940.1| fumarylacetoacetase [Ruegeria pomeroyi DSS-3]
MPLLKSWVASANSANHPFPLNNLPYGVFSTGEDEPRCGVAIGDMILDMAAAEAEGLVALTDYPLFDVPYW
NDLMEEGPAVWAALRERLTALLSKGSKEQEAVEPLLVPMAEATLHMPLVVSEYTDFYAGRQHAQNMGAIL
RGSPDLPANWLHIPIGYNGRASSVVVSGTPIHRPNGQTKAPDAEMPSFGPSKRLDIELEMGAIVGTGSEF
GQPITVDEADAMIFGYVLLNDWSARDIQGWEYQPLGPFQGKAFGTSISPWIVTAAALEPFRAPTPPREKE
LLPYLKGSRDGLYDIELEVLMQPEGADRASVIARTNYSRMYYSAAEQLCHHAIGGCAMNAGDLLGSGTIS
GPERGEFGSLMELSWAGREPFTLETGETRGFIEDGDTLTLRGNARGDGYTIGFGDCTGQILPAKAWG
>gi|56695591|ref|YP_165941.1| homogentisate 1,2-dioxygenase [Ruegeria pomeroyi DSS-3]
MNRPTDPHLLTQAATPAGTTAGYMPGWGNDFETEALPGALPQGMNSPQKCNYGLYGEQLSGTAFTATRPE
RTWCYRIRPSVKHSHRYEKIDLPYWKSAPCIDPDVISLGQYRWDPVAHSGAGLTWLTGMRTMTTAGDVNT
QVGMASHIYLVTESMVDDYFFSADSELLVVPQEGRLRFATELGIIDVEPKEIAILPRGLVYRVEVLEGPC
RGFVCENYGQKFELPGRGPIGANCMANPRDFKSPVAAFEDRETPSTVTVKWCGQFHTTKIGHSPLDVVAW
HGNYAPVKYDLRNYCPVGAILFDHPDPSIFTVLTAPSGVPGTANIDFVLFRERWMVMEDTFRPPWYHKNI
MSELMGNIYGQYDAKPQGFVPGGMSLHNMMLPHGPDKEAFEKASNANLGPDKLDQTMSFMFETRFPQHLT
EFAAKEAPLQDDYIDCWTSLEKKFDGTPGKK
>gi|56695592|ref|YP_165942.1| MarR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MTETNLPENDDFELRSFLPFLLNQAAEQSSLEFQQVYKNRYGMLRTEWRVLFHLGNSGEMTAKQIGDLAL
IHKTKVSRAVAKLAQRRYLTRTRDERDRRSERLSLTPAGEAVYRELRGIAEQYDARMAAKFTKGEVALLR
VMLRRLAAME
>gi|56695593|ref|YP_165943.1| adenylate/guanylate cyclase [Ruegeria pomeroyi DSS-3]
MDAAGQFHAEADASSTQLVSWLLQRGLEGARQDELLHGYCERLVELGVPLFRLHVAQSAFHPKYGGLGFN
WFRDQGVSSEEYGYTETPNAAWIRSPLYHLLDSGEQEYRERLLDSNADSRFPLLNELRERGATDYFAAGV
ILEKREHFERIDPTNTPEGVLISWASDGPDGFSDTDLRLVRESLPQLALALKSAANRQMAGDLLQVYLGR
DAGRRVLSGEIQRGSLQQIDAVLCYFDLKDFTALTERTPGPELIAMLNDYFGMAVAIIQGHGGNILKFLG
DGILAMFNLETPEQSAAAGLDAVVQMRRCMEQKNAERQAQGETTTGVTLALHAGEILYGNIGAENRLDFT
VIGPAVNLTVRLSGLHRSVGRNIILSEPVAKIAGHTAHDLVSLGRYMLRGVSEPQELYTIYKAPA
>gi|56695594|ref|YP_165944.1| hypothetical protein SPO0689 [Ruegeria pomeroyi DSS-3]
MAHIIVVGNEKGGAGKSTVSMHVASALARLGYKVNTLDLDLRQRSLGRYFENRTAFNKASGLDLPSPRNH
DLPEIDPASLKPGENVFDHRLSAAVARLEADSDFILIDCPGSHTRLSQVAHSLADTLVTPLNDSFVDFDL
LARIDSSGEKILGPSVYSEMVWNARQLRAQAGLKPIDWVVVRNRVGTQRMVNKEKMERAIEMLASRIGFR
IAPGFSERVIFRELFPRGLTLLDLKDVGVKQLNISNIAARQELRDMMKALQLPGVEIDF
>gi|56698710|ref|YP_165945.1| hypothetical protein SPO0690 [Ruegeria pomeroyi DSS-3]
MARLTADFWVHAYLARLRLMNIPAYVMAHGDDTAGAVLVKLSTLDGKAVAYHREYDLMSGARSWTVLTSG
PETEVDAAITRQRSFDPDLWVIEVEDRQGRHLLDQDGLA
>gi|56695595|ref|YP_165946.1| GTP-binding protein Era [Ruegeria pomeroyi DSS-3]
MTTRAGFVALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTRTRIRGVAMEGEAQIVFVDTPGLFQPRRRL
DRAMVAAAWGGAADADIVVLMIEAHRGITEGVERILEGLAEIAKGRTVALAINKIDRVPAEKLLGLSEAL
NARFEFARTFMISAERGHGVEDLRKWLAAELPESPWLYPEDQIADLPMRMIAAEITREKLTLRLHQELPY
QLTVETENWEERKDGSARIDQVIYVMRDGHKGIVLGKRGETVKAVGQAARVELEEFLDRKVHLFLQVKVR
PNWLEEAERYSEMGLDFKDGN
>gi|56695596|ref|YP_165947.1| multicopper oxidase [Ruegeria pomeroyi DSS-3]
MLRRDLLFGGAALLGAAGLARLGSATAPPEAQDLVIQRAAYRLRAQDTLGMVSLSPDAPPPVLYGRQGQE
MRFTVRNTLDDYTAMHWHGLRIANAMDGVPYLTQMPIGPGEGFAYAYTPPDAGTYWYHPHCMTMEQMAHG
LTGVMVIAEAEDPGFDSEEVINLRDFRLDAADAFLPAYTARGAARGGTMGNLQTANWRQGPVYDHGAGSL
VRLRVVNTDTTRIYKLYLDGGTARIIAWDGHPVRVVLPVPRAGAPLLLAPGQRVDLAVAMPAEEGRQIAL
MADLPGQPPRLMAGLRSVGSGSRRDLAELKPLPRNPVAQPDLERAELHEFVFGWTPEGDAPNDGFCGTLG
YTFWSINRTPWAGDAAKDVGPLAVLERGKTHVLRLRNESPNQHPIHLHGLAFVPIASNRRSLPPLWTDTM
LLLKDEVIDIALVADNPGDWAFHCHVIEHQKTGLTGFLRVT
>gi|56695597|ref|YP_165948.1| isobutyryl-CoA dehydrogenase [Ruegeria pomeroyi DSS-3]
MAHDGQDPMTMTTQTVLLPDLLSLTGAALAPVDALFERARETVREMVSEGGRVSGALIDANQTAAHGLSW
LATYQQSLRQMQRWAEALQAEGKFGEIEQLIHQIAFGEYLWQIYGGIQMNQGEVVRLQDLGLTQDDARGL
MAPEVMTLCDKGNTQAARTRLVELMQDQAGATMYGASGLDEELEMIRDQFRRYAVEKVEPFAHEWHLKDE
LIPMEVIEELAEMGVFGLTIPEEFGGFGLSKASMVVVSEELSRGYIGVGSLGTRSEIAAELIIAGGTVEQ
KASWLPRIASAEILPTAVFTEPNTGSDLGSLRTRAVKDENGDFKVTGNKTWITHAARTHVMTLLARTDPN
TTDYRGLSMFLAEKTPGTDAEPFPTPGMTGGEIEVLGYRGMKEYELGFDGFHVKGENLLGGEEGKGFKQL
METFESARIQTAARAIGVAQSALDIAMQYAQDRKQFGRALIAFPRVSSKLAMMAVEIMIARQLTYFSAWE
KDHGHRCDLEAGMAKLLGARVAWAAADNGLQIHGGNGFALEYKISRVLCDARILNIFEGAAEIQAQVIAR
RLLG
>gi|56695598|ref|YP_165949.1| hypothetical protein SPO0694 [Ruegeria pomeroyi DSS-3]
MGDAEGSLGRLGVETAVVSGAYFVTILLTFELVVPLQNLVFPEYSSRASLLFLPHGVRVLSAWLLGWRAV
PALLPGVIAAFAYVGGLDVLLPSRLIAIAIAVGAVPACFHLLRVIGLDLFPSRDRAPCWICVMGVGIVTS
LIIASLTNMAFGSDPIEAVAYLIGDISGLFFGMLALLYAFRLLGRSA
>gi|56695599|ref|YP_165950.1| hypothetical protein SPO0695 [Ruegeria pomeroyi DSS-3]
MQTLSKLAELRRLLHSMERTLGLQDLSPVERDIYYAASELSGDDQRIRTVGLIEHALLETVSRPTFFRAL
KSLVNKGYLAQCSTMNRGCYVVRSPES
>gi|56695601|ref|YP_165951.1| molybdate ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MKLEVELRHPMQGFTLDVAFAAPPGLTVLFGRSGSGKTTVINAVAGLLRPERGRVALGGETLQDSASRIW
LPPHRRRMGYVFQDARLFPHLSVRQNLGYGRWFAKTSGPTSFAQVIEMLGIGPLLDRRPGALSGGERQRV
AIGRALLANPRAILADEPLAALDEARKGEILPYFERLRDETKIPILYVSHSAAEVARLATTVVVLQDGRV
IRQGSAAEVLADPAVTPLGARAAGAILTARVVAHHADGLTELEAGGERLFLPRISHPEGTALRLRIPAQE
VILSRQRPEGLSALNILSGHVAQIRSGDGPGALVSLSTRAGTVLARITRRSATALELREGTPCHAVIKSV
AIAPEDIGR
>gi|56695600|ref|YP_165952.1| molybdate ABC transporter permease protein [Ruegeria pomeroyi DSS-3]
MTWLGPEEWQAVALSLKVSAWATALSLPLALLVAHALARGRFVGKALLNGLVHLPLILPPVVTGYLLLLS
FGPTGTLGQALASVGLTLAFHWTGAALAAAVMGFPLMVRAIRLSIEAVDPKLEQAAATLGASRLWVFATV
TLPLILPGLIAGAILGFAKAMGEFGATITFVSNIPGQTQTVPSAIYAFLQVPGGESAAARLVMISVALAL
GALLASEALARRAARRVAGT
>gi|56695602|ref|YP_165953.1| molybdate ABC transporter, periplasmic molybdate-binding protein [Ruegeria pomeroyi DSS-3]
MPEPSLPLSLFFRALACALLLAGPARAEQITVFAAASLKTALDDIAAGFEATTGNSVALSFAGSSVLARQ
IGLGAPAQIFISANPEWMDWLAEQGRIDPTSRRDLVSNRLVLIAPAGHAPSHPLADLAAGPGRIAMALVE
AVPAGIYGKAALTHLDLWDQLAPRVVQTDNARAALALVATGAVPYGIVYATDAQAEPRVMPLYTFDTDTH
PPIRYPAALVTGQDSAAARALLDHLASAEARAILFRHGFLPVEE
>gi|56695603|ref|YP_165954.1| molybdenum-binding transcriptional regulator [Ruegeria pomeroyi DSS-3]
MGPASLAPARMTRQTRAMSDTRPPPVYKLRLVFGEVGMIGPGKAALLDHIAQTGSIAAAGRAMGMSYKRA
WQLVETMNAMFRNPVVIRARGGAQGGSATLTPTGQEVLSAYRRFEAACHSAGAPHAAELHALLRKDEAGS
>gi|56695604|ref|YP_165955.1| glyceraldehyde-3-phosphate dehydrogenase, type I [Ruegeria pomeroyi DSS-3]
MTLKVAINGFGRIGRGVLRALVESGADDIEVVAINDLASPETLAHLLKYDSVHGRLQAPVLVEGDRMIVG
RSSIRLSAIRNPEDLPWADVDIAYECTGLFTEREQAARHLKNGSKRVLISAPGKGADRTVVFGVNDGALT
ADDVIVSNASCTTNCLAPVAMVLDHAFGIKTGYMTTIHAYTGDQPTHDTAHRDLYRARAASVSMIPTSTG
AARAISEVLPHLKGRLEGSAIRVPTPNVSLVDLSFVPERPATREAVNAAIRTAAQGPLAGILAYEEDPLV
SIDFNHDSHSSCFAAAQTSVTADGLVRVVSWYDNEWGFSNRMLDTGRRIGALLITPQRLAG
>gi|56695605|ref|YP_165956.1| oligopeptide ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MTEELLIETRDLTVGFPVGGRLFNKKTLKAVDGISIGIPRGSFFGVVGESGSGKTTLGRALLNAVPITGG
HASYDDGEVRYDLATLSGAELKDYRKRAQLIFQDPYAALSPRMTVRDIIAEPLEVMGLTNSREETDTRVR
EIAAKCRLNLEHLRRFPHAFSGGQRQRISIARALVSGPRFVVADESVAALDVSIQADILNLLKNLQSELG
LTYMFISHDLSVVAHSCDHVAVMYLGRIVESAPTRKLFAAPRHPYTKALFSAIPSLDPDDRGRAQKLEGE
IPSPTNQPLGCKFHTRCPYATDLCKTHEPVLQVEGDHAVACHRWQELL
>gi|56695606|ref|YP_165957.1| oligopeptide ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MSLIDVENLTLQFRTDEGLITAVEDVSFSLAPGEVMGLVGESGSGKSVTAKALMKLNAANAVYDPATRIT
LHLDSGPVDVMSLKRPRDMEIVRGGAVSMIFQEPMASFAPAMTIGSQMVEQLLIHTDLSKRGARDLSIEM
LDRVGISDAASRFNQYAFELSGGMRQRAMIAMALSTRPKLLIADEPTTALDVTIQAQVIDLMKDLVAEFG
MGIIFITHDLGVVAQTADKVAVMYLGRMVEQGPVREVIRNPRHPYTRGLIDALPQLDDLDKPLMPVPGDI
PSPLERPEGCVFHTRCTRIIGDICRTAVPGWADTGPDHRTACHLCHQDTAA
>gi|56695607|ref|YP_165958.1| oligopeptide ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MTAPSQTAKEAYFTASQRQLIWARFKKQRAAMVAATVLVVLILSGLFAPFLSPYDPTVAGRDKDYLNGAP
QIPKFCDKNGCSLRPFLHTVTRERSLATNFRWVEKVNEDERRYVQFFVQGDSYKLFGFIPGNIHLFGMDQ
GYVHLFGTDSAGKDIFSRTLHAVWTSLQVGTLGVLISFVLALAIGGIAGYYGGMIDSVIQMVTDAVRTIP
SIPLFMAIAAFIPPEWSAETRFFVITLILGLVGWPTLARRVRTHLLTERNQEYVLAAQLCGASPSHVIRR
HLLPSFTSYIIVDLVISFPYVVLSETALSFIGLGLKDPVNSLGVMLQNVTKADVLLNYQWYFIPVLFFIA
LVMAFVFVGDGLRDAADPYSESRK
>gi|56695608|ref|YP_165959.1| oligopeptide ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MLHFARFAATRAVMALVTLVIVSLIVFSLMELVPGDCAERYLAYKNTQGSAITLADIAAERARLGLDQPF
LTRWTSWLAGAFRGDFGDSCILRVDIAQLLGDKFWISLWICLGALLLAYMIAIPVGIISAASRNPYLNNS
LRVVSYLGLAMPNFLLALMVMLISTVYFGETLTGLFSPEYKEAPWSVDRVLDLLKHAWLPVFILGWSATA
FALQTVRALMSDEIGKLYVTAAAARGLYGRRLLWRYPARHALGPIVNSLGFDLNRIFNELPIVALILTLT
EAGSLLLEALARSNDQQLAGAIIFLLTASIVTLNFATDILLAVIDPRVRKSILR
>gi|56695609|ref|YP_165960.1| oligopeptide ABC transporter, periplasmic oligopeptide-binding protein [Ruegeria pomeroyi DSS-3]
MKRILLSGVAALALPGAALAACPAVTVADPMGVAAGTFPQQYDLAEFQSAAGCTMDFAENPAIGDLNARI
KGNPALPPLAERLPSEPLVVAPYDGIGQYGGQFDALSNATESGTSDFLSVRHVNLFRYSDDLQTVVPNVA
KSWEWNEDFTQLTVHLRAGHKWSDGAPFTAADVVFWYDNLMMDTNVMAEPKDYALAGGKPMKVEAVDDTT
VRFTLEAPKPGLIETFSFTYVQPFQPKHFFGQFHPALDANADANAQALGYENGYDLIKAYYGNSDWMDTP
SPMLTAGDKLAGLPKDTMPTLESHILVKETTEGRHYVANPYFFQVDTAGNQLPYISNMDETYVGDEEVRT
LKLLNGEVDYKSQAVNLTQAPVLLEGQEKGNYTIDVKPGIASATLTFNVTSEDLGKRAIFNDVRFRAAMS
VAIDRDQLNEVVAFGLGTPNQYIGFSPRPDFIDAKWESHEIAFDPDRARALLDEVGLVDKDGDGDRDLPN
GDPFVLDWQFSTQASSSQLVELIAQNWTDVGVTTTIKEVTSDEYRSSQSSNTLDVMMWGKGQPAGSILGD
GEIWVPPFDGYFDVRTGMLWAEWISSNGSAGVEPPAWVAELKSELDTYQSSAPGTETSIAAAQKMVEIMT
GQVLFIGTINAPAPVYHSNKLKNFPEFKTQSYEFYRTYPYRPAQWWLSE
>gi|56695610|ref|YP_165961.1| DeoR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MSDADPKVPHRGHELLDVLARLGGSARNAQIAQVMDVSEETVRRLVKTLAKQGKVERVHGGTYLRGSQDA
PMYSGALEQQPKEKTRIAKGVLELIRDGMTLFINVGSTTTYVAEQLRERRDLTIVTNSISTVASLADHNG
SRVFLAGGEVSRSERGCFGRATEDFARRFAYDVLVIGADAMSPELGVLAANPREAELTRALLGNATRVIV
AADYRKFSAIAPCIAAPLEAITDLVTDAAPPDALQDALDRCGVATHLAAKSGRITTRTPPPQDVGHSNTN
RKTLSFPTEVS
>gi|56695611|ref|YP_165962.1| invasion protein IbeA [Ruegeria pomeroyi DSS-3]
MARRISEPAREIDIIHETDVLVVGSGPGGLPAALAAARAGAEVTLVERFGCFGGNLTVVGVEGMHWYRHE
QTIESNGIAREFEEKAKEMGAAVPESQSLSHEIDSEGFKLVADRMVLDEPNIRPMLHRFFVAPLMEGDTI
IGIVTESKSGREAILARRVIDATGDADVVTRAGAPVYKTPAEQMMAASVMFHLAGVDKQRFMDGIKADPQ
TYRDWGGGGEWNIETSGKEDDMFSPFLKKPFQQAIRDGLIPPHLNTIAGTWGAVHDTGELTYMNLIHLDG
CDGTDPDSLTTYEIEGRRQTMLAIEALRRYTPGCENIRLRNFGMSIGIRDTRKVDCLYNMTETDVREQGR
FEDSIGIFPEFIDGYGILILPTTGRYFQMPYRNLLPRGVKNLLVAGRITGGDRISHAATRNMACCAVTGQ
GAGIAAALSVKSNRPLDEIDPLLIQKELERQGGRHH
>gi|56695612|ref|YP_165963.1| phosphoenolpyruvate carboxykinase [Ruegeria pomeroyi DSS-3]
MTSGRVNPQFRLEDQGIEGLGNVYYNFMEPALIEAALKRGEGTLGNGGAFLVTTGKFTGRSPKDKHVVKT
ASVADSIWWDNNAAMTPEGFDALYDDMLAHMKGKDYFVQDLVGGADPAYSINVRMVTELAWHNLFIRHLL
RRPAREDLNEFVADFTVINCPSFQADPAKHGCRSETVIAMNFDRKLILIGGTEYAGENKKSVFTLLNYML
PEKGVMPMHCSANHAVGNPVDTAVFFGLSGTGKTTLSADPARVLIGDDEHGWSDRGTFNFEGGCYAKTIN
LNPEAEPEIYATTTKFATVIENMVFDEETKELDFDDDSLTANMRCAYPLEYISNASVSALGGHPKNIIML
TCDAFGVLPPIARLTPAQAMYHFLSGFTSKVAGTERGVTEPQPTFSTCFGAPFMPRRPEVYGNLLRDKIA
RHGATCWLVNTGWTGGAYGVGSRMPIKATRALLTAALNGSLNNAEFRKDGNFGFDVPVSVPGVAEVLLDP
RRTWDDQGAFDKQAAKLVQMFADNFEQYVPYIDEDVKAVAIG
>gi|56695613|ref|YP_165964.1| DNA-binding response regulator ChvI [Ruegeria pomeroyi DSS-3]
MSKIALVDDDRNILTSVSMTLEAEGFEVETYNDGQAALDAFNKKLPDMAVLDIKMPRMDGMDLLQRLRQK
TQMPVIFLTSKDDEIDEVLGLRMGADDYVKKPFSQRLLVERIRALLRRQEAVAGDAAGTTTGETKVMERG
HLRMDPLRHAVSWKGVDVSLTVTEFLLLQALAQRPGFVKSRDQLMDVAYDDQVYVDDRTIDSHIKRLRKK
MRSADPDFAAIETLYGIGYRYNEE
>gi|56695614|ref|YP_165965.1| sensor histidine kinase ChvG [Ruegeria pomeroyi DSS-3]
MRDTGTSESNRSGDVVLGDDWVAPHSTVSKELRVKRARRSLFSLRGSPLTRKIITFNLIALIILVAGILY
LNDARNGLVVQRAGALVGETQLVADVFEAQITGSAPVNLATGDGVDVDATLEDLSLRRGVEVFVFDTARN
MVGQTKGTHVNPRLQALFEDKTGSTIITDALSGLWRAVSSIFANAPKSSAPALEQQIASLLPEALAGETR
VETVLNTAGGTVIAAATPILQAGTPIGAVAMASPAGEIDALARRDRERVLQMFVVALLVSVGLSLVLAST
IANPLADLAEAAELGRDRNSRRMNPGRIRIPDLSARPDEIGRLSRALRGMVSALYNRIEGNEQFAADVAH
EIKNPLASLQSAVGTLRMVRREDQRDKLLSVIEHDVRRLDRLVSDISNASRLDAELVKEEEQSFNLLTML
DNLNQYLGEDARSKGIDYITDMPPDPIMIQGLEARLAQVFVNLITNAISFCEDGDAIRVWTRRRANRVLI
VVEDTGPGIPDEALAKIFKRFYSQRPEEHFGNNSGLGLAISKQIVEAHGGVIWAENIRPTEADVTSDPLG
ARFVVGLPI
>gi|56695615|ref|YP_165966.1| Hpr serine kinase/phosphatase domain-containing protein [Ruegeria pomeroyi DSS-3]
MSPRIRWARALSWACRSKPVGPAALQDLKERDCVTVHASCAAVAGQGLLITGASGSGKSALALEMMALGA
RLVADDRVILRAAPHGIVADAPDTIRGMIEARGLGLLRAEPAGPVVLSHVLDLDRSEPNRLPEFREILLL
RHSVPLLFRPDTPHLAASLIQLLKAGRVAPMR
>gi|161598433|ref|YP_165967.2| hypothetical protein SPO0713 [Ruegeria pomeroyi DSS-3]
MGEISQIVFVTGPSGAGRSTAINVLEDLGFEAIDNLPMGLLMRLLDGPALRRPLALGLDARNRDFSTEGF
LDLSKRLASLEGFQVTTLYLDCSADILLRRFSETRRRHPMSPGSSPLEGVEHELELLRPIREAADTLIDT
TALNVHQLRREVERWFAPSGGSMLAISVESFSYKRGLPRGLDMVFDCRFLANPHWQPDLRAADGRDPAVA
AYVHADPQYLPFFTRVTDLLQSLLPAFRSEGKAHLSVGFGCTGGQHRSVALTEAVAKALAEAGGQVSIRH
REMERRKPDARPD
>gi|56695617|ref|YP_165968.1| PTS system mannose subfamily IIA subunit [Ruegeria pomeroyi DSS-3]
MIGIVIVAHGGLAREYLAAVEHVVGHQPGLVAIAIEADHDRAEKQQEILAAANAVDTGDGVVVVTDLFGG
SPSNLSLRACAPADRRILYGANLPMLIKLAKSRHLPVGDAVRAAIEAGRKYINTQNVTLD
>gi|56695618|ref|YP_165969.1| phosphocarrier protein HPr [Ruegeria pomeroyi DSS-3]
MAQRTLKIINEKGLHARASAKLVEVVEGFDATAEVSRDGLSASGDSIMGLLMLAAARGTTIDVETSGPDA
DALADALEALVNDKFGEGF
>gi|56695619|ref|YP_165970.1| hypothetical protein SPO0716 [Ruegeria pomeroyi DSS-3]
MVETAQNSKTGSAAHPSTPPGEIYDRRTLTYANSFDDRWTSTWIRAIEWMTGKLTILRMVNRFEKTNDQY
RGQKFWGGALKTMGIDLLTPAEQIARIPKEGPVVVVANHPHGMVDGMILAELIGRVRQDYRILTRSVLTG
LDEAATSFMIPVPFPHDPEAQRKMVEMRANAMAHLKAGGVVALFPSGVVMSSDSWWGPPIEREWNVFTAQ
MIRRSGARVVPIYFPGRNSRAYQIACQVSPILRQGLLLHEIVRSCKKPQAPVIGAPIPEEDMEMLGRDPR
GFMAWLRQHTLSLGG
>gi|56695620|ref|YP_165971.1| 3-hydroxybutyryl-CoA dehydrogenase [Ruegeria pomeroyi DSS-3]
MEIQKVGVIGAGQMGNGIAHVMALAGYDVLLTDISQQALDAALSTVRGNLARQAGRGKISEADMEAAMAR
ISTTLALADLGQTDLVIEAATEREAVKQAIFEDLQPHLLPHTILTSNTSSISITRLASRTDRPERFMGFH
FMNPVPVMQLVELIRGIATDEATFAACKAVVDKLGKTAASAEDFPAFIVNRILMPMINEAVYTLYEGVGN
VRSIDESMKLGANHPMGPLELADFIGLDTCLAIMNVLHDGLADTKYRPCPLLTKYVEAGWLGRKTQRGFY
DYRGEVPVPTR
>gi|56695621|ref|YP_165972.1| hypothetical protein SPO0718 [Ruegeria pomeroyi DSS-3]
MVGAMSYELPGAGAPEAATCRYGLSKLRFRGPVRELNAPYVACIGSTETFGRFVPDPYPALLEQRLGEAC
VNLGSINSGLDAILLDPELARLAQAAEFCVLQVPGAQNLSNRLYRVHPRRNDRFLEASPMLAALYDEVDF
TEFHFNKHLLGRLYEISAERFTVVRAELQQAWQARMRSAVDVLGSRVVLLWLRYRHQRPDDPAEALGPEP
LMVTPKMVAGLASRVRATVEVPVQMAGQSDELGDMIFGMLQEPAAEHSIGPVMHQVIADRLYRALQDIDT
>gi|56695622|ref|YP_165973.1| electron transfer flavoprotein, alpha subunit [Ruegeria pomeroyi DSS-3]
MAVLLLAEVTGGELALDATAKAVSAAKALGDVTVLAAGASAAAAGEAAAKIDGVSKVLVAEDASLGHRLA
EATAALIVGLADGYEHIVAPATTDAKNVMPRVAALLDVMVLSDVSGVVDGSTFERPIYAGNAVQTVKSKD
AKKVITFRTSTFDAAGEGGAAPVETISVGDNPGLSEWVEDKVAASDRPELTSAGIVVSGGRGVGSEADFK
LIEALADKLGAAVGASRAAVDSGYAPNDWQVGQTGKVVAPNLYVAVGISGAIQHLAGMKDSKIIVAINKD
EEAPIFQVADFGLVADLFQAVPELTEKLG
>gi|56695623|ref|YP_165974.1| electron transfer flavoprotein, beta subunit [Ruegeria pomeroyi DSS-3]
MKVLVPVKRVIDYNVKVRVKADGSGVDLANVKMSMNPFDEIAVEEAIRLKEAGKAEEIVVVSIGVKQAQE
TLRTALAMGADRAILVVAADDVHQDIEPLAVAKILAKIVEEEQPGIVLAGKQAIDNDMNATGQMLSALLG
WSQGTFASELNVEGDHALVTREVDGGLQTIKVKMPAIITVDLRLNEPRYASLPNIMKAKKKPLDEKTAAD
YGVDVSPRLEIVKTEEPPARAAGIVVGSVDELVAKLKEAGAV
>gi|56695624|ref|YP_165975.1| glyoxalase family protein [Ruegeria pomeroyi DSS-3]
MERVDGFGGFFFRAKDPKALAEWYQQHLGIDPAPGDYSGRCWQQSAGATIFAPFAQDSAYFGDPGKGFML
NFRVRDLEAMIAQLRAAGIEVQPDPGSPYPNGSFARLTDPEGNPIELWQPA
>gi|56695625|ref|YP_165976.1| ATP:cob(I)alamin adenosyltransferase, putative [Ruegeria pomeroyi DSS-3]
MVVLNKIYTRTGDKGQTALGNGARVAKYSDRVATYGTTDELNAFVGVARLEADGDMDAALSRIQNDLFDL
GADLCRPEMEKDAEAEYPPLRMIAAQVARLEQEIDAMNSDLDPLRSFILPGGSALAAHLHVCRTVARRAE
RLAVELAEGETVNPQAITYLNRLSDWFFVAARTANNGGKDDVLWIPGANR
>gi|56695626|ref|YP_165977.1| hypothetical protein SPO0723 [Ruegeria pomeroyi DSS-3]
MDLLMIVMFMAMGAVVIVLMIGLGGFAKGGTFNAKYGNKMMRLRLLFQFIAVLLILLYVYLRGQGS
>gi|56695627|ref|YP_165978.1| short chain dehydrogenase/reductase family oxidoreductase [Ruegeria pomeroyi DSS-3]
MAKTILITGCSSGIGLAAAHGLRAQGWHVFAACRQQRDCDRLRAMGFDSPRIDYDDAESIASGLAEVLDA
TGGTLDALFNNGAFGMPGAVEDVPTEALRAIFETNFFGWHELTRRVIPVMRAQGHGRIVQCSSVLGLVAF
PWRGAYVATKYALEGLSDTLRLELADTGIHVVLIEPGPITSKLREKAIPHFERHIDWQGSALRAKYEGGL
LKRLYEDRGPDRFELPPSAVTAKLIHALEARRPRPRYYVTTPTYIAGILRRILPTRLSDRVLGRI
>gi|56695628|ref|YP_165979.1| hypothetical protein SPO0725 [Ruegeria pomeroyi DSS-3]
MHDAAVALGAHHRDHPSGQLVPAKEIGLENGPQRLGGHILDRTGHAKGAVVEQRVQGAAGGVQHFGQPRG
DRLGIVIVDARAVEAHGAQPVAIALLAAGGEHMPALRPQAMGRRKSDARRTAGDEDCLCHEFVQRRPGWS
LLLGRPSGLGNGSNVSVRLFADQRRGDPADLLLGQHPQAQPAGARIVQHLDLVAQGETADDGIERAGSVP
HVDARSGDLAQVGRRAVIGEGLGLGCRLGFSGLDPQCQNPAFERGEGQSPALGGIVVEQGQPLVQAGAGA
GQALQLFLRGQCRLFDRCRAGRIGGQRHFCDQLCGFDLDQRFGLGGRLCRDALGLGRTQAARFEIGAAAE
FPEGKAENGERDDDKAHGAPPVNTRNENRLSETGRRLADQILTYPAQGVQKWGKNSLFSPNLLSPGKLSP
ANSPPVALPETTERVSHHL
>gi|56695629|ref|YP_165980.1| DNA topoisomerase IV subunit A [Ruegeria pomeroyi DSS-3]
MSDTIDDPNMKQDGGGHQVSEPLRRAIGERYLTYALSTIMHRALPDARDGLKPVHRRILYAMRELRLSSS
GGFRKSAKISGDVMGNYHPHGDAAIYDAMARLAQDFNVRYPLVDGQGNFGNIDGDNPAASRYTEARMTIV
AEALLDGLNEDAVDFRDNYDGTLTEPVVLPAQFPNLLANGSSGIAVGMATNIPPHNIAELCDACLHLIKT
PDARDDTLLNYVPGPDFPTGGIIVEPPESIAQAYRTGRGSFRLRCKYEVEDLGRGQWQIVVTEIPYQVQK
SKLIEKLAEVIQTKKVPILADVRDESADDIRLILEPRTKNVDPEVLMGMLYRNSDLEVRFSLNMNVLIDG
VTPKVCSMKEVLRAFLDHRQEVLLRRSRHRLGKIDHRLEVLEGFIIAFLNLDRVIDIIRYDEDPKAALMR
EEWGIDHPRALNEADYVSPAPGEGELSEVQAEAILNMRLRSLRRLEEMELIRERDALMAERAEIEDLLAD
PALQWARISDQLKETKKTFGKDFPGGARRTRFAEAGEVEEVPLEAMIEREPITVVCSQMGWVRAMTGHID
LTRELKFKDGDGPRFIFHAETTDKLLVFASNGRFYTIGAANLPGGRGMGEPLRLMVDLPNEAEIVDILIH
QPERKLLVASTAGNGFVVPETEVVAQTRTGKQVLNVRDDERALICVPVAGDHVAVVSQNGKFLVFPLDEM
PEMGRGKGVRLQKYNMARGKQGALELDGGLSDVTTFTWAEGLKWSMGGDKTRHETDLSQWLAKRASVGKR
PPYGFPRSYKFK
>gi|56695630|ref|YP_165981.1| hypothetical protein SPO0727 [Ruegeria pomeroyi DSS-3]
MASRAATSSSDTSAALCHFLPMRLGTGRIRRLHPLQPNACRDAIMIRVLSLLTGLALLAACTAATPDEPL
EDLGAFKLGHNVVVASKAQKGPISRDATAEEWETALKAAVGERFSRYQGDQFYHLGISVEGYMLAPPGVP
VIYSPKSALIINVTVWDDAGQSKLNPEVEQFTVFEATTGESWLMGSGNARTREEQLMGLSRNAVGEIEDW
LVEQHKENGWFAPRPDAEATTGTPVKPAQG
>gi|56695631|ref|YP_165982.1| elongation factor Tu [Ruegeria pomeroyi DSS-3]
MAKEKFERSKPHVNIGTIGHVDHGKTTLTAAITKYFGDFKAYDQIDGAPEEKARGITISTAHVEYETDSR
HYAHVDCPGHADYVKNMITGAAQMDGAILVVNAADGPMPQTREHILLGRQVGIPFMVVYMNKVDQVDDEE
LLELVEMEIRELLSSYDYPGDDIPIIRGSALHAMNGTEPSMGEESIRALMAAVDEYIPTPARAVDQPFLM
PIEDVFSISGRGTVVTGRVERGVINVGDSIEIVGIRDTKTTTCTGVEMFRKLLDRGEAGDNIGALLRGID
REGVERGQVLCKPGSVTPHTKFEAEAYILTKEEGGRHTPFFANYRPQFYFRTTDVTGTVTLAEGTEMVMP
GDNVGFTVELIAPIAMEDGLRFAIREGGRTVGAGVVSKIIE
>gi|56695632|ref|YP_165983.1| hypothetical protein SPO0729 [Ruegeria pomeroyi DSS-3]
MSLRKKIADSEAVLNWVARRIASYIRLVHRNTSWQRIGYEELDQLAAAGEPVIVVLWHQRLAQSPYFFPL
DKGRICSITSAARAGSMVGRVQQLFGMDTIAMSSHKRHVALSREVLGKMKDGISIGIAADGPRGPERVSS
TVPLVWARSSGKRVFGITYSVRHGREMGSWDRLLLPRPWRNDGVFLCREWTDPVPRKASEEEFEALRQSL
ERHMNEITAEADLMVGRTPWTGK
>gi|56695633|ref|YP_165984.1| glycerol-3-phosphate regulon repressor [Ruegeria pomeroyi DSS-3]
MDAEARQHEILQKLRQQERVGVDELTLDFGVSSQTVRADLRDLHDRGLLKRTHGGAVRVETVSNREYGAR
RQLHRGQKAAMGALAASLIPDDSSVTLNIGTSTEQVARALSGHRGLTVLSNNINIINLLIGTPSKELVLV
GGAVRQSDGAIVGEDAVEFISRYKVDFAVIGASAMDADGAILDFDAREVSVARAILRNARSRILVCDGSK
FDIAAPVRICDLAELDYVVTDRAPPAEFLRRAEQTETEILIAEQTDD
>gi|56695634|ref|YP_165985.1| glycerol-3-phosphate dehydrogenase [Ruegeria pomeroyi DSS-3]
MTETDTRVYDLFVIGGGINGCGIARDAAGRGLSVALAEMKDLAWATSSASTKLFHGGLRYLEYFEFRLVR
EALIEREMLLRAMPHISWPMRFVLPYHPDMRFENDTPTSRLLSTVMPWMKGRRPAWLIRLGLFMYDHLGG
RKILPGTRTLDLSSDPAGAPLQERFRKAYEYSDCWVEDARLVVLNARDAAARGARIMTRTKVVSATRGAD
HWTVTLEDTVTGDTRTLCARVLVNAGGPWVGELIHGALRLNSSEQVRLVRGSHIVTRRLFDHDRCYFFQG
TDGRIIFAIPYEGEFTLIGTTDQEHHDPDAHPTCTEGERDYLLRFASEYFKRQLTPEDVVWTYSGVRPLY
DDGASSATAATRDYVLKVDRNGGAPVLNVFGGKITTYRRLAESALDKIAPFFPGLAGKWTAGVALPGGDF
PVDGVAALTEGLMRQYPFLTQAWAARLVRAYGTEAAAMLGEAGNAEALGEDFGATITAHELDWAMSREWV
RSAEDFLWRRTKLGLRLTPDQVARIEAYISARG
>gi|56695635|ref|YP_165986.1| esterase, putative [Ruegeria pomeroyi DSS-3]
MSLALILALAPLALVLLVLILGWIRTRMLARRAATLVPQMGQIQPVSGGAIHYVEAGDPARQTLVLIHGL
AGQLQHFTYALVDRLSQDHHVIALDRPGCGYSTRDGAALAKLPEQARMIAEFLDTKGIKDPVLVGHSLGG
AIALAMALERPRKVAGLALICPLTHHMAGAPAVFRPLEIRNARLRRLIGRTIAVPLANWTAQQTLREVFA
PEDFPEDFLDRAGGALGLRPQAFVTASEDVVGADASIAAQAQRYRDLEVPGAILFGAEDAVLLPTQHGVP
MKKFGLRCELLPGRGHMLPITAPEECEEFIRGVSISTRVPATLRS
>gi|56695636|ref|YP_165987.1| PaaX domain-containing protein [Ruegeria pomeroyi DSS-3]
MTRHTPWFDTAVTRLADPQNQRVWSIIVSLLGDLARRKGDRISGSALTRITQPMGIKPEAMRVALHRLRK
DGWIESSREGRSSVHYLSEYGRTQSDRVTPRIYTRTPELPEAWHILIAEDGSSLNTLNDLLLTDTYIGIG
RTVALGSGPVPGDCDDLAGFEVSARAIPGWLQTRLFPEDLGTACQSLHQDCAELRAAGVPGLLTPFQVAT
LRTLLVHRWRRVALRHPDLPAAFQPRGWMGPACREQVFALLDALPLPPLPALNEAE
>gi|56695637|ref|YP_165988.1| bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase [Ruegeria pomeroyi DSS-3]
MALQQISSFAAGQWVAPGAGARTIASAITGAPIASAGNDALDVLAMLDHARNTGGPALRKLGFHDRARMI
KALGQALNARKAELYAASFDTGATQSDHLIDIDGGIGTMFVFASKGRREMPDGQIYLDGEVEQLSRNGTF
LGQHVCTPLQGVAVHINAFNFPVWGMLEKLAPTLLAGVPSIVKPATNSCYVTELAVRIMLEAEILPAGAL
QLVSGGLGDMLDHLDCQDVVSFTGSADTALKLRSNPVILQNSVRFVAEQDSLNASILGPDAEPGTPEFDL
FIKEVAREMTTKAGQKCTAIRRIIAPQPRVEAVIEALSARLSKTVIGDPRDEATRMGALVSGGQKADVLA
KAAIIGQEAEQVFTMDPGLSGDLANGAFVPPMLFHCADPDRAQRVHDTEAFGPVSTVMGYRDVDHAVTLA
NRGGGSLVTSLITHDADVARDVVMGAGAFHGRIYINNRDSMKESTGHGSPLPHMVHGGPGRAGGGEEMGG
VRGVKHYMQRTAVQGSPEMLARIGGKWVPGANEVAGPAHPFTRRYNELSIGETLNTAARTVTMDDIEHFA
HFTGDTFYAHMDDAAAKRNPFFPGRVAHGYLLLSFAAGLFVEPNEGPVLANTGLDGLRFMKPVSAGDSIK
VRLTVKKKTRRTEDYGEVRWHVTLTNQDDEMVAEYELLTMNAY
>gi|56695638|ref|YP_165989.1| TRAP dicarboxylate transporter, DctM subunit [Ruegeria pomeroyi DSS-3]
MTAALIGFALVLVLVLLRLPIVFAMGLVGTLGFAYERGGSILDERGLKAAMSMVGRQVMDTAQDYGLSVV
PLFILMGLFVNKGGMARELYAVSNAFLGHFRGGIAMATVAACGGFSAICGSSLATAATMSKVAMPEMRRY
GYTDELSTASIAAGGTLGILIPPSVILVIYGLLTETSIGKLFMAGIIPGILGILFYLFAVRWTVWRNPEA
GPAGERAGWGERVRALGSVWAVLLLFFLVIGGLYGAFDFHPLNLTFSPTEAAGMGAAGAFLIALFRGGLT
VGSTFEVLKETSFTAASLFSVLIGAQVFSNFINLAGLPEALIAMVTAYDVAPFVVILMILGIYIILGCVF
ESLSMLLLTVPIFFPLVTSLGYDPIWFGIVVVVVTEISLITPPVGLNVFILKGVVGDVSTGTIFRGVTPF
WIADIFRLALIVLVPVVVLYLPQQMGAMGH
>gi|56695639|ref|YP_165990.1| TRAP dicarboxylate transporter family protein, DctQ subunit [Ruegeria pomeroyi DSS-3]
MTSLIRLARHASFAPVLVACLALFILMVMTFCDVILRSVLNAPIEAATELTRILMAVLVFSVLPIISVNN
GQIAVDLTDGLFHRLRLDRIRDGLIHLVSGIMLYWPMSRVWILAERSRDYGDVTEYLAIPTYIVGWFIAI
SVGISAVALVITGLLHLFAPRLLSEALK
>gi|56695640|ref|YP_165991.1| TRAP dicarboxylate transporter, DctP subunit [Ruegeria pomeroyi DSS-3]
MKLTKLSTLLASAAMAVSGTIAMAADYTLTISSWAPPTHGINAMMWPKFVEMVEEATDGQVTAELKLGIA
PPPAQMDLIQDGAADLSIIFHGYQPGRFVTTKLIELPGYEGSAEAASVAYWRAYDQYLSKADEHRGVKLI
ALHTHGPAQLHSTAPVTDMAQIAGLKVRIPGGVGGDVGTALGATGIQVPAPKVYETLASKAADGVVMPFE
SRKGFKLTEVAQNVYEMPGGLYRGSFAFIMNEDSFADLPEDIQQALEDKVFGEPLSREIGKIWDEIDAIG
RTETEATEGNAINAASAADLEKFAAIAADVREKVIAEVAAAGIDAQAAYDLIKSEMAAN
>gi|56695641|ref|YP_165992.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase [Ruegeria pomeroyi DSS-3]
MGENQVVTVRRDGDIAWVEIDSPPVNATSTPVRAGLARAVAEVQGARVAILTCAGRTFVAGGDMTEFDRP
AEEPHLPDVVQMIEDSETPFVAAMHGTVLGGGFEIALACAWRIAAPGTKFGLPEVNVGLIPGAGGTQRAP
RLIGMMAAIDMACSGKMLDAAQMLALGGLDQVAEGDLRAAAQGFAKGLPPRPEKTRLRQVQALNSEALAE
AKRALSKAAKGRAAPLHNLDALQWAALPFDQGQPRERALHLGLRQSDESRALRYAFFAERLVARPDAIAG
VTPRELTRVAIVGGGLMGAGVAMACLGGGLSVTVIERDAAAAQAAQERVAGLVAAGVKRGKISPDAQADM
LARLATTDTYADASDADLAIEAVFEDLDVKRIVFADLAAVMRPDAILATNTSYLDPQLVFAGIANPARCL
GLHFFSPAHVMKLLEIVKTPDTAPEVLATGFALGKRLRKISVLSGICDGFIGNRMLAAYRREAEYLLADG
ALPHEVDAAMRAQGLPMGPFELQDLTGLQIAWANRKRQAATRDPAERYERIADMLCEMDRLGQRSGKGWY
RYAEGSRSPERDPEVETLIVDYSAKRGITRRPFSAEEIAQRLLAVLANEGARIVSEGIAERAEDVDMVQL
HGYGFPRHRGGPMHLAQSQGWEKSMEIMELVASESPDSWVLAPRGDPSAEI
>gi|56695642|ref|YP_165993.1| enoyl-CoA hydratase [Ruegeria pomeroyi DSS-3]
MSDTILAQDHGNWVEITLNRPDRLNSFTDEMHLALRAALEGARDNGARAVLLTGAGRGFCAGQDLGDRDP
SKMDGPPDLGYTVRTFYAPLVRLIRSLDFPVICAVNGVAAGAGVNIALACDIVLAGESAKFIQSFAKVGL
IPDTGGSWHLPRLLGEARAKGLALTAQPLPAKQAEDWGLIWKALPDDQLMTEARAMAEQFANGPTLGFGL
TKRCIQAACVDTLEDHLELEADAMKTCGESADYAEGVSAFLEKRAPRFQGK
>gi|56695643|ref|YP_165994.1| phenylacetic acid degradation protein PaaD [Ruegeria pomeroyi DSS-3]
MTPKERAERSAAAMWSDDNASKWAGMEITRVDEGLAVLELTVAAHHCNGHGICHGGVTFMLADSAFAFAC
NSRNQSTVAQHNVISYIAPGHLGDRLTATATEVSLTGRSGIYDVKVTNQDGRTIAEFRGMSRAIKGHLFD
ED
>gi|56695644|ref|YP_165995.1| phenylacetate-CoA ligase [Ruegeria pomeroyi DSS-3]
MKDLSPKKEDLDPIEIASIDEIRALQLDRLKWSLRHAYDNVPMYKKRFDEAGVHPDDLQTLADLAKFPFT
YKNDLRDNYPFGLFAVPREQIIRLHASSGTTGKPTVVGYTANDISNWADLVARSLRAAGLRKGDMIHNAY
GYGLFTGGLGAHYGIERLGATVVPMSGGQTEKQVGLITDFKPTGIMVTPSYMLNILEQYHKVGMDPRESS
LQVGVFGAEPWTDAMRREVEEAFDMHAVDIYGLSEIMGPGVANECVETKDGPVIWEDHFLPEIIDPATGE
VLPDGEMGELVFTTLTKEGLPMVRYRTRDLTRLLPGTARSMRRMEKITGRSDDMIILRGVNVFPSQVEEQ
VMATGGLAPHYQIELYKAGRMDAMRVFVEALPTMTDELSKTAAARMLTKRIKDIVGVSTEIVVGNPGDVE
RSQGKAKRVVDNRDKE
>gi|56695645|ref|YP_165996.1| TetR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MARTIAKDHDQKRAQILKSAARVFAREGFDRASMTQLARECGISKANIYHYYDSKDAILFDILETYLHEL
RDRICGIDIAGLSGPERLHTVVREILLAYQGVDDEHRVQTSGMSALPDEQQKQLRGYQRDMIGFLSNILN
GIAPETFAGNPGKLRGATMSVFGMLNWYYMWNSGADTAAREEYARMVSDLTLHGLKGL
>gi|56695646|ref|YP_165997.1| hypothetical protein SPO0744 [Ruegeria pomeroyi DSS-3]
MLTQGNFDVLPVGDGAKRAQTVQPTVKLRIETIGVPRISDENGRNLTPVGSRNRVIPVILALSPRMTVGR
RWLEALLWSDRGPDQASGSLRQALSSIRRQLGDARDILCANRTDIWMTSKDVTIDLLDDQQGVLQRLRAG
RDFLEGIDILSEGFEDWLRQERASLLQMAEVELPARALPARLHATEAERPLSWTQEPPRFFLDQDLGLES
DKLERFLTDAISTQLTQTVKSHFRADVRALDGTLTPVIVTPGARFAIRVTRINKAFAVLARMTEEPAGRL
FWSRQLFIDSRETESMMDTAAALATEASEAMGARSFVASPAQQANVLAAEALADVFSFDPDRLRKAIRTL
GRANDIDPHAPRPALKALALAFLALETRNTDRDHLIGEVTDLIRQSRALDSRNALALSFLADVQDLVFED
PQTALSYAKSALRSNPGIGYAYASLGALELRRGAAEAALIAASRAQRQLANSSLEVFSLMRLCVANLTAK
DFDAAEQAAQRAAELAPTSQPPLRHLYALRLRRKDYAAARQTLRALRRLDPLFSMQYLRENPEFPAATIR
TMQLHKLMDVELG
>gi|56695647|ref|YP_165998.1| hypothetical protein SPO0745 [Ruegeria pomeroyi DSS-3]
MRRSGPMPWTNGPDGPGGIAMTYTWTNWDKPKDDIDPYIHWATVGPGEDQIKREDESDLRDGDNVLKFIP
QRFLPDDTWYHFKHLDQIVVPTLALNPDGDVGVKQPEQANLPSGEDGTLSTVIDPKTIIAGVIDVGMPLG
HRRLRFADGKTRILSAWQMIGNWSLNPARFPDVPFGCAFYEHEINEHLQDFSGGTFKGRLDEEAFHKRLG
ALNLSQVSRQTSLAQRASHGAHVLDMVAGADPGATDNFDERVRIIAVNAPSSAVFGASGTYLDSYMLHAI
QHVADVADGIWKKMKDAGADVPEGGFPIVINLSFGKHAGYKDIHDRFAAALDQFQDIRVKKQRKARIGIV
MPTGNDNLARCNAFLEPMRGQPKALNWRVLPQDQSSNFTEVWFEQVDRQKDELTPAIRLSFNAPGATVPT
PQPPKLTKGETQFCALQRDGVTVAHLYVAWAVPEDHVREGKIRRTERNRFRYILCVAPTYRLDGDPSVAD
SGVWRISLQTRRREGHFVTLSIQTDQGLTPNRVINLRSYFDDPGYVTNDSDGRPLESYSYPRNADGVYIN
NDILAVTPVRRHGTMNASAAHKGAARVGGYRASDGRPSFYSSTGRGRRDGKDAGTTLPRPQGTKTKRAPT
AAFPTDDGPAHGGILSAGSTDGSQVVMRGTSFAASQASRRLICAINDGTAQTTASETLWLIARSSELNRH
VPEILGYDTELIEVIGAGRIPSPRTAGQRRVRLGPFDT
>gi|56695648|ref|YP_165999.1| hypothetical protein SPO0746 [Ruegeria pomeroyi DSS-3]
MNSESPRRLFAFSPLSGQFKKYFSNIGLAPRAGYPGHSWPDSRGNCGRIAIGWNIDVMPGAGWPCRTCKL
KKKCAPRDGAPKRKERQMALIGGTHGGTHGGTHGGTHGGTHGGTHGGTHGGTHAGGGTSPLVSSALMVQQ
DAITGFWDVEGTDLNAPNCNGVGDDLKYLSDLRRQQILTGELLSNFRVEADGGNGARVELCGEPVATLKI
PTYAAGNGLRPQMQLLRGYSDLRADRIPEIYRQMDDIISFFEAAHHMNLNRREATLHVLSAVHSVVISLS
MQAKHHTWMPRPSEYAAQVQPIIPTPDHSSYPSGHATEAFALATVLHRLMTGQKLGQAMTEPDLPMVFRI
AHRIAVNRTVAGVHFPVDSAAGACLGAALGEAICDMAAAGHGTALTPGALEFEPDAAATSDFAPERDFDL
VWIKASLHPTPASDEVENPRIKLFAALWADAVDEWA
>gi|56695649|ref|YP_166000.1| peroxidase family protein [Ruegeria pomeroyi DSS-3]
MYCQPDHGGPAGPYGNIYRSTMSACRSFDYFFPDAPVQVADPARVKALDALGLAMVKRDPVAGANSALAP
VLTYFGQFIDHDITAGTDRDGANEMIDAPDLAPRSREAVRTEKQNMRSGRLDLDSLYGGLPDGVPQNPAD
KAFLDKLVSAMRSKTFRGQMRIDVYSEDTPDSAVPFPTTDRAGDLLRLGALERDKLVTEDEILGLSDGMR
KMFTRKDGKTLNPTRAIIGDARNDENLIIAQFHLVFLRLHNRLVQNRPGHVKASKAFDWARDRTRWIYQW
LVVNEYLRKICQEDILDDILAAGPGLYQNFLANSGCTDGKLPLPIEFSAAAFRFGHSMVRDAYDWNTFFG
TKTTHDPTLPEAGSQLLFAFTGGGEMNGFPVDRLPGNWGADWQRLIFAGAGATPTEFARKIDTHLALELG
ALPGGTAGTIMAHLARRNLRRGHMLNLPSAQDCAGELGLVPLGTAELGEGEIAQVLSQGGLSEATPLWYY
VLREAEVRNSGEALGPLGTNLVAQTLLGLVQSDPGSYWHQTGTGGARWTPADLVADGLPDLSSIEAVMRF
GGHLR
>gi|56695650|ref|YP_166001.1| hypothetical protein SPO0748 [Ruegeria pomeroyi DSS-3]
MSVRLRDRTAAGAASAPAAPQPKKETTMKHIHAAALCGALFLAVGCAQQAPLNSAALSPGNLASGMPYYL
PKSFLRVTFERAKLLDATIVVENRPDLSRAFVARAGYSAFSNDLYTIETTADGLLASVKVDTDEQSDEIV
KAATSRVTAILSGEDAEISLRDASTDAFSIMINPFASEYRGSGKSLGNGMTLSTSYDASVLEGPTTPCPA
AAAVCVPLLVPVTITIKDDKAKFEHIATVAHPRHVMGIRIDRRPCVRSIATLTFKAGMISKFDVEKPSEV
AACLSIPLDVISAIIAAPVNALSGRSARLRAQKGVLEQQKALLEAQQALIDAQIAAAQSN
>gi|56695651|ref|YP_166002.1| hypothetical protein SPO0749 [Ruegeria pomeroyi DSS-3]
MRWTHGPFTSVPYSNLCRITRHTSFWRNKTMANSIKFLRTFAEWGDQVRPFERSDDVLRILQDLTNDFGQ
TFGAYVGGKFTSVWLHEGDAPGSKEDLDLIFVNQSDGFLDIVLRREGVPADGGFLSPSASVQVLDEIVDG
LRVIVGTDEAGNKTRYEAIGGQYNAVGPAATLAVTNPARARKRRVRTSA
>gi|56695652|ref|YP_166003.1| hypothetical protein SPO0750 [Ruegeria pomeroyi DSS-3]
MLSNRELLQKLLKGIETGDPAAAAVVNEEKYIQHYPQTHEGSEGLAVLFARLAKTNPRVRFVRVFEDGDF
AFAHNEYDFASLRVAFEVFRFENGRAVEHWDNIQPMLGPNPSGRGMLDGVTQITDLERTEANRALVRDFA
QRVLVGRQLDFLGSCVDDGLIQHDPEIADGRAAYRAALEAVTNGQPRLHYTRLHRVLAEGNFVLCMCEGE
RDGVHSSFYDLFRVENDTIIEHWNTIEAIAPRNEWKNENGKF
>gi|56695653|ref|YP_166004.1| adenylate/guanylate cyclase [Ruegeria pomeroyi DSS-3]
MEAAAALNNWMMTTGRRSGDPVGIVSHLCASLVDAGVPLWRVNIGQRFANPLLIAWGVVWTPDGTEVYDV
THARMLTDGYIGSAFEYILENQRPLHKSLRGLDPARDHASYLEFAAEGGTDYYATLLDYGDGSQHGCTFA
TRAEDGFSPKHLALIEAIKPGLSSAMEPITMRKSTQSLLRTYLGDGPSSAVWNGAIKRSERSTLEAVIMF
SDLRGFTAFSDTQSEQEVFDALDGYFEVVVQSVEGNGGDVLKFMGDGVLSVFPISGRADKAARCRQSALA
AQAVLAGLATLNEHRAAQGKTRLDIGIGLNAGQVSYGNIGSQGRLDFTVLGGAVNVASRVEGLTKTIGAP
VLATASVAQHAPDLFASHGRHEVRGLVDTVEIFGLVETSP
>gi|56695654|ref|YP_166005.1| phenylacetic acid degradation protein, putative [Ruegeria pomeroyi DSS-3]
MAEDMTIDSYLAAGGMLTNPTNVPARYRAELMKLMATFVDSELAGAAGFAEIINQGPGIKERIAAAKIVL
EKTDNADRVLRIMGEFGADTQRYATHHPWTARLERDADIGAARTERDMRLAVFNYPIEGWADAVMMNLLM
ARAVVVQLADFTMISYQPLAEAFRAIAPIETRHGELALEGAAKLVEDGEVEALQASAAYWWPRVAASFGT
GSAGRTEALRAMGLRRTGNAEMRTRWEAEAANLLDSLGLKRP
>gi|56695655|ref|YP_166006.1| phenylacetic acid degradation oxidoreductase PaaK [Ruegeria pomeroyi DSS-3]
MARFHDLEVTDIHKTIRDAVVVTLKPANGAASEFDFTQGQYLTFRRAFEGEELRRSYSICSGKDDGVLQI
GIKRVDGGAFSTWANEELKVGDTVQAMPPMGGFHTPLDPGAEKQYLGFAGGSGITPVLSIIKTTLAREPR
SQFTLVYANKGVNTIMFREELEDLKNLYMGRFNVLHILETDAQEIELFTGLVTEEKCGQLFEHWIDIQHV
DTAFICGPEPMMLGIAAALRAHGLSDAQIKFELFASAQPGRAKRKAVSSEAAKGANQTRAAITLDGATQS
FDMPKDLSILDAALQNSLDAPFACKAGVCSTCRCRVLEGEVEMVANHALEDYEVEKGYVLSCQAYPLTDT
VVVDYDQ
>gi|56695656|ref|YP_166007.1| phenylacetic acid degradation protein PaaJ [Ruegeria pomeroyi DSS-3]
MDQPSQQQVWDWLDTVPDPEIPVISVVDLGIVRDVAWEGETLTVTVTPTYSGCPATAIISMDIETALRNR
GVKDIRIKTQISPAWTTDWLSEKGKVKLEEYGIAPPRPAGGPERCPRCGSKAVEKVSQFGSTPCKAHWRC
TDCLEPFDYFKCI
>gi|56695657|ref|YP_166008.1| phenylacetic acid degradation protein PaaI [Ruegeria pomeroyi DSS-3]
MTRDQAFLQFLLRMGDNTLILGHRVSEWCGHAPVLEEDIALANTALDLIGQTQMWLALASEVQGEGKSAD
DLAFLRDAWDFRNALLVEVPNGDFGRTLMRQFLFDSWHKLMLERLKGSADERVAAIAEKAMKEVTYHVER
SRDTVIGLGDGTEESHARMQEALDYLWPYVGELFEGDAVDAEMVAAGIAPDPASLRADYDAILTEVMKAA
TLSIPKSGFAHKGGRDGRMHTEHLGHLLTSMQWLQRAYPGARW
>gi|56695658|ref|YP_166009.1| phenylacetate-CoA oxygenase subunit PaaB [Ruegeria pomeroyi DSS-3]
MKNEWPLWEIFIRGQHGMSHRHVGSLHAPDAAMAIKNARDVYTRRNEGVSIWVVEAQHVAASSPSDKGPL
YEPSESKVYRHPTFFDIPEEVGAM
>gi|56695659|ref|YP_166010.1| phenylacetate-CoA oxygenase subunit PaaA [Ruegeria pomeroyi DSS-3]
MYAQMIKTASDGVKSREDMSDEERAFQDKIDNDIKIEPKDWMPDDYRRTLIRQIGQHAHSEVVGQLPEGN
WITRAPTLERKAILLAKVQDEAGHGLYLYSAAETLGESRDDLINLLHEGRMKYSSIFNYPTLNWADIGAV
GWLVDGAAIINQVALQRTSYGPYSRAMIRICKEESFHARQGYHAIMAMAFGTPEQKKMAQDAVNRLWFPA
LMMFGPSDKDSIHSEQSMAWKIKVKTNDELRQQFVDQTVPQILYLGLELPDPNITWNEARGHYDFSDPDW
SEFFNVIKGNGPCNTDRLAARRKAWDDGQWVRDGLLAHSRKKAAARMAAE
>gi|56695660|ref|YP_166011.1| beta-ketoadipyl CoA thiolase [Ruegeria pomeroyi DSS-3]
MDAFICDAQRTPIGRYGGALSQVRTDDLAAVPLAALVARNPQVDWASLDDVIYGDANQAGESNRNVARMA
ALLAGLPVDVPGTTVNRLCASGMDAVGMAARAIKAGDYDMAIAGGVESMSRAPFVMPKATSAFTRANAVY
DTTIGWRFVNKKMHEMYGTDSMPQTADNVAEDYDISRADQDAFAARSQARWAAAHAAGVFGDEITPVTIP
QRKGDAIVVDTDEHPRPGTTAEQLGKLKGVNGPDKSVTAGNASGVNDGAAAILMASEAAAVKNGLTPIAR
VVGMSVAGVEPRVMGIGPVPASRKVLARAGLTIGQMDVIELNEAFASQGLATLRALGVADDAPHVNPNGG
AIAIGHPLGMSGARLVMTAAYQLKRTGGRYALCTMCVGVGQGAALILERV
>gi|56695661|ref|YP_166012.1| hypothetical protein SPO0759 [Ruegeria pomeroyi DSS-3]
MHLPHSGYELRDMVSRGWLAYRADQFSLPRYRDCVMAQSTLHFRSLVTLPHALADILAGIFDALVRVGEA
NAKIRQINALSALSDAELAERGLRRADIIRRVLSDRV
>gi|56695662|ref|YP_166013.1| alkylhydroperoxidase-like protein [Ruegeria pomeroyi DSS-3]
MATVPLLSDEEASAQALAVFDDIRATRGTDYVNNFWRALAHDPALLQATWERLKVVMGPGTLDPLVKELI
YVAVSTANGCAYCVHSHTAAARAKGMTQAQYGELLAVIGMAMQTNGMVTGMQVPVDEAFKA
>gi|56695663|ref|YP_166014.1| cyclase family protein [Ruegeria pomeroyi DSS-3]
MCDICVMNAVKDRMLSRRDLFRTGAVVAAGAALGSVAAPPAMAAGIGEVRDMTHVYDADFPTYFGAPGIE
AVQNFNFKEHGFNLFTLTLNEHTGTHVDAPLHFSADGQSVDEIPVGNLVCPLCVVHIHEKAAADADAQVT
PDDLKAWISAHGPIPDGACVAMHSGWAGKTGGAGYRNADSEGKMHFPGFHVEAAQMLIEETGAVAMAVDT
LSLDHGPSADFATHYAWLPTNRYGIENLANLDKVPASGATLIVGAPNHRGGSGGPARIFAMV
>gi|56695664|ref|YP_166015.1| GntR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MAGQTEQVLNGVLEDIEHGRLGPGDLLEEAALTERHGVSRTPVREALIQLETQGLIRRLPRKGAVVFKPT
LEEFLAILEVHARLEGQAAGLAARRMNATQAAELEAVVAACEAHARDKGDGDPFGYYRLNLRFHETVALG
AGNPYLVEMIKTHARKLLAYYRARYSYPGSIPASAREHRQIATLIFDRRREEAEAAMIRHVQFDQVTVMD
LLAALG
>gi|56695665|ref|YP_166016.1| glutamine amidotransferase, class I [Ruegeria pomeroyi DSS-3]
MHLAILMTNTDESDFAQRHPKDDQKFAELIGLARPGWTTSAFVVKDGHFPTTLDGIDGAMITGSPASTLD
DAPWIAQLLQLIRDMHARRLPVFGACFGHQAIALALGGTIGRNPGGWVHGLTRNRMLDRPDWTRDLPDEV
RLYGCHMEQVTALPKGARAIAEGPDCPVTGFVLGQHIYTTQHHPEMTHDFVEALTEEMAEELGEAACASA
LASLSERSDMAAFAESVARFFEQAHQR
>gi|56695666|ref|YP_166017.1| cytochrome P450 family protein [Ruegeria pomeroyi DSS-3]
MTVWTPTDDGYADLTSHDAFAGGAPHNTFARLRREDPLHWTEYADGQDFWSVTRHADIAEMNRNTAVFSS
ARGIRMEDQSYEEYLARRTFQETDPPEHSQTRMLLMKAFSRTTMAQYEDDIRAICVDILDEVLDKGTFDA
TKEIARQLPMRMLGRIVGLPDADLPWLVEKGDALIANTDPDFTTHVLDKLDTDEYRMMPFNSPAGAELYL
YAKDLMEQKDKAGDTSGVLHMILQPSKDGSVISDTEFRNFFCLVVAAGNDTTRYSIAAGIQAMCHQPELL
EQMRAGGDIWETAPDEIIRWATPALYFRRTALQDHEMHGKTIRAGDKVLYWWSSANRDETVFDDPFRVDL
FRNPNRHLSFGQGGPHVCLGMWLARLEVKVLFQELAKRLSSIEPAGPHRFLRSNFVGGIKELPVTVRRA
>gi|56695667|ref|YP_166018.1| glutamine synthetase family protein [Ruegeria pomeroyi DSS-3]
MKDRLRAMFCDHLSVMRGKYLPNSKIADSSTRFCRSTFGVHYDRDLLDAPGAMMKQGLPDMELKWVHDDI
RDSWHSGTKVVLGDLYDDHDQPLPLCPRGALKRAVAAWQAHGLSPKVGIELECFALQADDNGRLVPYDAP
GGVVYGTGPFADPLRFNDRIWAMAEEMGFSLDMITAEFDSPQFEYTLTFDDALKAVDDIVLFRLMAREIA
LEYGIVLTFMPKPIAEAGGSGMHINFSFQDETGANALSSGPRGGPEHMNDLARGCLAGLLHHHKGLAGLI
APTANSYMRLQPGSLSGYWQNWGGDHRNVTTRISSEGGAKARLEHRMADASANPYTAVAAVLQAARLGVE
NGHTLPPMETGDGFDQTDAKEGTAIDLAGAVRDLERDSVLTEAVGAELVANHVFMKQKEVRKTRDLEGDA
LRDFYVYFI
>gi|56695668|ref|YP_166019.1| iron-sulfur cluster-binding protein [Ruegeria pomeroyi DSS-3]
MRVTWKLADGREIAAEVAPGLSLMEAALANNVPGVIGECGGCLSCATCHVVVDAAWSERTGAPGEFEDAM
LDITAAERQPRSRLSCQIEAHPDLDGLVLHVPEA
>gi|56695669|ref|YP_166020.1| FkbM family methyltransferase [Ruegeria pomeroyi DSS-3]
MPETKSVAAECLGVKVPASRFLNETRIERINAARYEGQEIAGALHVTGPKDVVLEIGAGLGIVGAVVAKN
AKPKSVTSFEANPELVPEIEALYALNRLGKKISLRNQILISAPDRPESMPFHIRSSYLGSSLLNPTERPS
TVVDVPTADFAEVCAETGATVLIMDIEGGELELLRHADLSQFRAVVLEFHPEAYEIAGMRECKGILNAAG
FEKVNEKSTRTVWTCLRPDS
>gi|56695670|ref|YP_166021.1| IclR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MGTVSKALSLLALFNHGRLEMGLSELTRLSGMNKATVYRMMTELQAAGFVEQMNGDRAYRLGPEVLRLAA
LREAAVPLLSVSRDVLRRLCDETGETSHMSIQRNGQLTTLTHAYSSHHGTRVAMEDAEILSLHATGSGLA
FLAFSSEEVVEHALSAPLIKHTPQTETDPARLRQALAEAQQSGVAESVGGFEADVHSHAAPIFGADQRPI
GALAVAAPVSRMTAELKSRVRAALKEAALDLTQRTGGFCPPGYPGAA
>gi|56695671|ref|YP_166022.1| hypothetical protein SPO0769 [Ruegeria pomeroyi DSS-3]
MTDGSLACQSVFKPQVQIMNQSCGRVPNREDNMTIKTKIAGAFATAAIALTAGMAVAEYPEKPVNFIVPW
PPGDLEDVLTRMIADDFQEKYGVAAAVVNKPGGGGGPFPGAIEVANAPADGYTIGSFVIGVPVMGHQIDI
APLTPAKFDPLGIFLTYPFVIATSGDAPYSSMAELAEYAKSNEVALGHFGDVLTPTQVTKAFAKNAGFEW
GSDAAFDALDCNTLASGDADVINTTLQLILPCLDSVKVLTSITDQRIPLVPDAPAIGELDADLNIALWNG
LFVTKDTPQDVRDKIIAVAKESMMSERAQAVAKETGALVYWQDAGDSAARIENDIATMARIGGLLE
>gi|56695672|ref|YP_166023.1| hypothetical protein SPO0770 [Ruegeria pomeroyi DSS-3]
MPRPLSLPEPCHMPTERERRFVGPRRAQLIFALFFVVVSILLLSQIGSQTKWVEKSKLFAQPRFWPAVGL
GGMAVLGTMHLYLLPWRKVTRYDWWELRKWTQVLEFALWFLAYVLLVPMIGYLPVTLVFVPLLAWRMGYR
DRRMLGLSVLFAVAVVVLFKGLLGVKIPGGAIYEYLPGALRSFFILYL
>gi|56695673|ref|YP_166024.1| membrane protein [Ruegeria pomeroyi DSS-3]
MDLLLSALDILMRWDVALALLTGSVGGVLIGAIPGVGPAVAIAILLPATFSMDPIVGLTVLLGIYGSSMY
GGAIPAILINTPGTAVNALTTYDGYPMTARGEPRRALSLAYSASFFGGIFSVICLILFAPVLARVAPYFG
SREIFLAALLGIILMVVAHRGQTLIAGALAAFGIFIQTIGLEPVKYTSRYTFDQPFLSGGINLIVVVLGL
FALSQAFVLLTSEDEKIRMTRLRGGMFQGLRELARHPRVATVSASFGVVMGMIPGVGEFTAQFMSYTYAQ
RSSKRPQDFGNGSSEGLIAAETANNAVPAAAMVPLLALGIPGEALTAMMLSVFYVHNVVPGPGLFQNQMD
FVVALYLSLLILNVLVLVFLLFATRSLIQVVRIPNRFLGVCILTLSFVGVYSLRNSATDCVMAALFGVLG
YVLKRLSMPSVPIILGMVLGGIMEVKLRAGMARVKEPLDFIDRPVAFLLFLAIVLVLIGHFRRVLRERAE
IKAAERGALKSGHRFGQMLGRRRGRFVKDRFKLVRARHAKRLRALKDLF
>gi|56695674|ref|YP_166025.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase [Ruegeria pomeroyi DSS-3]
MPEAIGYERVGDIVILAADNPPVNALGHAVRQGLAVGLDRAEAEGARGVLIYGTGRTFFAGADIREFGKP
PKEPHLPELCNRIEASPLLVVSALHGTALGGGLEVALATHYRIAVPQAKVGLPEVHLGILPGAGGTQRLP
RVAGVEAALDMITTGRHVRADEALRLGVIDRVAEGEPREIGLSYLRELLDEGAPRRPVGEMPAPAPVDFD
AIYAAVLRKGRGQLSPATAVRAVQAACEAESFAAGLKRERELFMELMNSDQREGLIHAFFADRAVGKLPE
LEGVAPRPLAAIGVIGGGTMGAGIATAALLSGLSVTMLEMTPEAAEAAKGRIEGNLSGALKRGKLTAQQF
DNLTTKALTLAIDYDALADADLVIEAVFEDMEVKKQVFTKLDAVCKPGAVLASNTSYLDINQIAAVTSRP
QDVLGLHFFSPAHVMKLLEVVIADQTAPDVAATGFALGKRLGKVSVRAGVCDGFIGNRILSVYRTCADHM
ILDGASPYQIDEALEEFGFAMGPFAVADLAGLDIGWAVRKRKRAEGLDPRARDSAYADKLCEAGHFGQKT
GKGYYDYAAGAKARVPNPEVLPLIEAERAQQGITPRAFSKDEIVRRYMAAMVNEAAKVVGEGIARRPLDV
DVTLLYGYGFPRYRGGPLKWADMQGLPELLADIKRWAAEDAYFWQPAPLLEQLVAEGRTFDDLNKEAV
>gi|56695675|ref|YP_166026.1| acetyl-CoA acyltransferase/thiolase family protein [Ruegeria pomeroyi DSS-3]
MKQAVIVSTARTGLAKSFRGSFNVTHGATMGGHAVQAAVARAGLDGSEIEDCIIGCGFPEGETGSNIGRQ
IAIRAGLPVTASGMTVNRFCSSGLQTVALAAQAITEGGSGPMVAGGVESISMVQPKARPAPEAWIQEHKP
AIYMAMIETADIVAQRYGLSRAYQDEYSLRSQQRIAAAQAEGKFADEIVPMQTKMAVKDKESGEVSMHEV
TVDRDECNRPSTTLEGLAGLEPVRGAGNFVTAGNASQLSDGAAALVLMEAAEAERRGLEPLGAFKGFCVA
GCEPDEMGIGPVFAVPRLLERHGLKVDDIDLWELNEAFASQCLYSRDRLGIDPEKYNVNGGSIAIGHPFG
MTGARMTGHLMLEGKRRGAKLGVVSMCIGGGMGAAGLFEIF
>gi|56695676|ref|YP_166027.1| acyl-CoA dehydrogenase family protein [Ruegeria pomeroyi DSS-3]
MDLNYSDEELAFRAEVRAFLAENLPAEVSDKVRRGISLGKEGHEKWHATLNARGWLAYNWPREFGGAEWN
AVERHIFEEECAAAYAPRIVPFGLSMLAPVLQKFGTKEQQDHYLPRILSGEDWWCQGYSEPGAGSDLASL
KTRAVRDGDHYVVNGQKTWTTLGQYANWIFCLVRTDPEAKQQEGISFLLIDMTTPGITVRPIVLLDGTPE
VNEVFFDDVRVPVENLVGEENKGWTYAKYLLTHERTNIAGVGFSQAGLDAVKRIARIETANGRPLIENPH
FAARLAQIEIDLMAMATTNMRIISQAASGQAPGVESSMLKVKGTIIRQEINDLTRRAVGPYAMPFASEAI
EGDNAPIGPDYAGPVSAQYFNNRKLSIFGGSNEIQRGIIAKVKMGG
>gi|56695677|ref|YP_166028.1| acyl-CoA dehydrogenase family protein [Ruegeria pomeroyi DSS-3]
MDFNLTEERQMLQDTLRRYLADRYTTSVRNTILDSDSGMSADIWAGLAELGVIGALFSEEDGGFGGAGFD
IATVFEELGRAGVVEPMLDSAILGGRLIAALGDEAQRGLLEEIIGGAAHLALAHGEPASRYDLTRVETSA
RVDGDGIVLNGRKAVVVNAEAAGHLIVSARESGGIFDLDGISLFLVPVGTPGVTQHGYPMLAGGRAAEVT
LDTVHLPQSARLGAAGEGLAPLMDAIAAANVALCAECVGAMQSAVELTRGYLMTRKQFGRPIGTFQALQH
RFADMLIELEQARSALINASGHLDSADRDRQIAAARNLIARVGRLVAEEAIQMHGGIAMTQEYELAHIAK
RIVMADHRFGDADYHLERFIALSAA
>gi|56695678|ref|YP_166029.1| hypothetical protein SPO0776 [Ruegeria pomeroyi DSS-3]
MPSAQPDPAGPRVRASGCQQMVGFRIDLSHADGHARCHLDIGAQHLNSQDVLHGGIIAMVMDVACGNAAS
AYFDRQEHPPVVTVSLNTNYLAAVDRGRVTGIGRVTGGGRKLAYVNGELLHEDGTLIATATGVFKRHRLV
R
>gi|56695679|ref|YP_166030.1| enoyl-CoA hydratase [Ruegeria pomeroyi DSS-3]
MLARVDDRGDRLVVVNMNGARRGALSPDLYAAIAEAMEQAADPRIRAVILSSEGGFFCAGGDLNVLIERR
QLSEAERREKVDLLHDLIRAIRACPVPVIAAVEGGAAGAGASLALACDLLVAAEDAKFTAAYVKAGLVPD
AGLTSALARMLPRQLAMEMCLLARPVTAARMADLGVVNVLATPGEAETQAHALADALAQGPRGAQGVIRR
LVAEAYEASEAQQLDAERDAMARAAGGDEAAEGIAAFLDKRKPRF
>gi|56695680|ref|YP_166031.1| long-chain-fatty-acid--CoA ligase, putative [Ruegeria pomeroyi DSS-3]
MEKWHDYPGAQIASRPDAPAFSDSGGADWSYGDLDRAISALVDVLSAKGVHANDRVMILAENCCAVVAAL
FAASRLGACAVPINARQTGPEVNKIIAHTEPAAILCASDISADAAAHAPRLDAQLVEGAFGRMHLATPHP
SKPDPVLSDVAVMLFTTGTTGTPKGVMLTHGNLLFGGRSSAELRGMTTDDVIYGVLPVTHVFGLASVVTA
ATCIGAPVRLDARFTAARSYAALTSGVTLFSAVPQMHALLMQHAREQGYDHLPGGTLRYTSSGAAPLDPA
WKRKAEAFYGVALQNGYGLTETTAGVSATRNPIGLPDISVGRPLPQVEVRLDEAVIGGGDGVGEVLTRGP
HVMKGYYRNPQATEAALHDGWFRTGDLGRHDAEGNLHIAGRCKELIIHGGFNVYPPEVEAALNDHPQVIQ
SAVVGRMIEGDEKVVAFVQVAPADAPDPDELRAFAAARLAGYKRPSQIVLATALPAAPTGKILKHKLLDH
FADQLD
>gi|56695681|ref|YP_166032.1| ribulose-phosphate 3-epimerase [Ruegeria pomeroyi DSS-3]
MSFDRKIKIAPSILSADFANFGAEIRAIEAEGADWVHVDVMDGHFVPNLTFGPMAVKAFRPYVKTVMDVH
LMIAPVDPYIDAYADAGADVLTAHIEAGPHIHRTLQAIRGAGMKAGVALNPGTPAESVAHLLDLTDLICV
MTVNPGFGGQKFIDMTAKIARLRQMIGDRPVHIEIDGGVDPKTAPLVAQAGADVLVAGSAVFRGGSVDNP
GVYGQNIAEIRAAAEGVWA
>gi|56695682|ref|YP_166033.1| phosphonate ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MLRIDKLTKRFGDNIAVNAATLDVDKPCMIGIIGRSGAGKSTLLRMINRLSDATDGRILFEDRDVTRLRG
AEKRAWQAQCAMIFQQFNLVPRMDVVSNVLHGTLNRRSTLATMFNLYPTEDIHRAIDILDRLGIAAHAAK
RAEALSGGQQQRVAIARALMQDPAIILADEPIASLDPMNAQVVMQALRRIHEEDGRTVIANLHTLDTARR
YCDRVVGMRDGRIVFDGLPEQLTTGVAREIYGADASFSEAATSTEIDTLDAALPARQRAGATA
>gi|56695683|ref|YP_166034.1| phosphonate ABC transporter, periplasmic phosphonate-binding protein [Ruegeria pomeroyi DSS-3]
MGRTNQPERPKMKKFVAVLAATTALATPALAQEITEFRIGILGGENAQDRLNSNECLREKAEDLLGVETK
LFAPADYNGVIQGLLGGTIDMAWLGASGYAKTYLSDPEAVEPILVKVNNDGGYGYYSIGFARKDSGITSL
ADMKGKVFGFGDPNSTSGFLIPSIEIPQETGATMTSGDYFGEVKFTGGHEQTIVAVGNGEVDGGVTWADG
LGAWEDGFNSGALRKAVDAGLVDMNDLVQIWQSKPIPEGPFVVRKALPADVKVKMTGLLASLKSMDEDCA
YGVLQGDAKGFMPITHDAYEVIIEARKLKSN
>gi|56695684|ref|YP_166035.1| phosphonate ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MTDLTAGQGELARIREDYTALTQRKRVYGGILLILFVSLMAAGFHTADDRNAGGFVDGWRRIFDYPAEVL
SEALEKSAQLPGHLVHFLPALVETLNIAAAATLIGTLGGTALALLSTRGLAYWPRLIPLFRRIADICRAV
PEIVIALVLIFVLGGGPVPAMIAIAIHTAGALGKLFSEVAENVSLKPVEGLESTGANWAQRMYLGVIPQV
GPNFVSYALLRFEINIRASAILGFVGAGGIGYELRNAMSWGQGRYDEAAAIFLLLFVTIVAVDQISDRLR
ARLTHGARAGATA
>gi|56695685|ref|YP_166036.1| phosphonate ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MSTATTDLELNHLKERADGLFARKRLLALGLPALVLAYLAYIFFAFDMPGLAARANWDNGRTLVADSYSY
KTHVTRDNRTGDVSVAVEGERKGSYPEGTGPGWVALGETTVIDLKDGHVVRFGPETVEYDIPGYGTLRAT
PTRGQGVVTELPPGALPDWINMSKNRITVTTEAGRLTVTRNRSEVFRYFTGWELFWFTLDSPYHGLSPAE
LARRATQGEAGAIWHDFWNNNMWRHGDVAWAIGETILMAFLGTFGAAIIALPLAFLAARNFNPLAPFRFA
VRRVFDFVRGVDALIWTVVLARAFGPGPLTGALAILVTDSGTFGKIFSEALENVDDKQIEGVQSTGANAA
QRYRFGVIPQITPVLLSQVLYFLESNTRSATIIGAITGGGIGLLLTQAIITQKDWEEVAYYILLIVLMVM
LMDWLSGWLRARLIRGGSDKPRKTRTAPQPDPFLLP
>gi|56695686|ref|YP_166037.1| chloramphenicol acetyltransferase, putative [Ruegeria pomeroyi DSS-3]
MARLSADTPFVHPGCQITDSSFGAFVEIGANSRVANSTWGDYSYCDRTCDIANARIGKFANIASFTRIGA
TDHPMEKASLHHFHYRSADYWDDAEHDADWFAHRAGRTATIGHDTWIGHAAIIKPEVTIGHGAVIASGSI
VTKDVAPYTIVGGNTAGLIRRRYPEDVAERMMALAWWDWDHARLRAALPDFRSLRAEEFLEKYL
>gi|56695687|ref|YP_166038.1| 2-dehydro-3-deoxygalactonokinase, putative [Ruegeria pomeroyi DSS-3]
MGRDWIALDWGMTARRIWVMRGRDPLDEIVETGPRAPDRAAILSLVAGRHAGQGVPVVACGPLGPVRETV
PCAPLSGGLWQIDLGDPRVLLHAVPGLAQTEPADMMQGDETRIAGFLALNPDWDGVICLTGETSRWAHVS
AGEVVSFRSFLSGAMLAALAGGTVLGRWLAAPDLDKTAFEAAVADGLSRPEQMLARLWSAHAAATLQGLP
AGIARARILGGLIGAELAATRPFWLGQQLAVMGEGEMPRLYVDALGAQGAPATQADAARMTRAGLVAAWG
AMTA
>gi|56695688|ref|YP_166039.1| thioesterase family protein [Ruegeria pomeroyi DSS-3]
MSFSTEIEVRFKHCDPAGIVFFPRYFEMINDVVEDWFANDLGCPFHELVKENGAPTAQIQARFTAPSLHG
DVLSFRLTPTRIGNSSLDYDLTAHCGDELRLRATATLVHVARLGRSQPWPQAIRERVAAQIDSA
>gi|56695689|ref|YP_166040.1| phosphoglycolate phosphatase [Ruegeria pomeroyi DSS-3]
MPLALVFDLDGTLVDSAPDITAAVNRMLAGEGQAALDLATVTSFVGNGLPHLVARVIDHLGLDMARHDAL
TATTLAEYNRAASALTRPYPGVIEALDLLKSQGAVMGICTNKPEEPARHVLADLGLAGFFDVVIGGDSLP
TRKPDPQMLQASFAALPDLPRLFVGDSEVDAETAQNAGIPFLLFTQGYRKRPVAELPHRAAFADYAALPG
LAAQALSI
>gi|56695690|ref|YP_166041.1| metallo-beta-lactamase family protein [Ruegeria pomeroyi DSS-3]
MTLTRRTLLGRLGAGIALTATTPLRLWSATETSIGAARITSLSDGHLVLPAGFLFDPMPQEDLAPLRARY
GLEGATLRPDCNITLMQSEGRNILFDAGSGTSFQDSAGDLVDALDAIGLAPDDITDVVFTHGHPDHLWGV
LDDFDDPLFANARHLIGRVERDYWLDPETVDQIGADRASFAVGAARRLEALETLETFEDGDEILPGVAAV
ASFGHTPGHMSFEIRAGDAALMVVGDAIGNHHLAFARPHWPSGADQDLEMGAETRVRLMQRLASEHMTMI
GYHLPEGGMGHVEAAEDGYRFVPLEG
>gi|56695691|ref|YP_166042.1| hypothetical protein SPO0789 [Ruegeria pomeroyi DSS-3]
MTIHSATPTADPAFQILPSHKAEELTKGGNLAHIRLGDQLYTLRITRAGKLILTK
>gi|56695692|ref|YP_166043.1| hypothetical protein SPO0790 [Ruegeria pomeroyi DSS-3]
MSAAVHRGGAAVGHLADLPTLEASAVHCLRLWSDATEGRAALPEGRSAELLKQICGLCASYGRRPLMRHG
LGCACLGADEACFAHMVAAAATGAREDALMLAALIVRPDLAPALVALSEQLGLALHRRPMVGAAQYRTLE
SRAGRLH
>gi|56695693|ref|YP_166044.1| hypothetical protein SPO0791 [Ruegeria pomeroyi DSS-3]
MLTEFWAEALRVHWGIEAVLERLDGEYDLNFLARARNGQDYVLKVMRPGCEAGLVEMQVAALDHIAEVAP
GLPFPKVFAALDGAMLPEIADEAGAPRLAWLLERLPGRCYARAKPHSEELILKLGRVLGATDRALEGFAH
DGLARNFKWNLMQAGWIGAELQAIADPARRALLREIAAEFSGLRDRLAALPVQAIHNDVNDYNILVKGGL
DETRRVSGLIDLGDMCAAPRVCDLAIAGAYVVLDHPKPERALAALVRGYHAANRLSAAEVDLIWPLLRMR
LAVSVVNSTLMAAQNPDDPYVTISQAPAWRFLENASVNGGLMAARLRVACGLPVTDGAERVHAYLNQNRG
RFAAMFGTDLGEAPMGSLSVENSTWPQNPFHMPIEEAARVGEEFGTGLWLGYYNEPRLIYAEPGFRKGPW
KASDRRTVHLAVDVFAPAGTVLHAPLSGRVEAVENRTGHLDYGGVVILHHETPQGDAFYTLYGHLDPEVC
DRLKPGDPVAQGAGFARLGDAGQNGGWAPHVHFQLALTTQGMETDWPGVGDPDEMDLWHAVCPNPAALLN
LPDDKVFYRPSDKAAVLAGRRAHFGGNLSLTYDDPVMLVRGWKHHLFDEWGRPYLDAYNNVPHVGHAHPR
IQAVAADQLQRMNSNTRYLHPAQLAFAEKVLSKLPARFEVCFFVNSGTEANELALRLARAHTGNMGMVTP
DHGYHGNTTGAIAISAYKFNKPGGVGQADWVELVEVADDYRGSFRRDDAERATKFADFVDPAIARLQEMG
HGVAGFIAETFPSVGGQIIPPKGYLAAVYDKIRAAGGVCIADEVQTGLGRLGDYYFGFEHQGAEPDIVVM
GKPIGNGHPLGVLVTTKAIAQSFDNGIEYFSTFGGSTLSCRIGKEVLDIVDDEGLQENARLMGERLMTGL
RVLEGEFGCVGDVRGMGLFLGVELINPDGSEGTEICRYVKNRMRDHRILIGSEGPKDNILKIRPPLTIEA
EDVDMILWALREVLAEVGDWAPAPACDHDHHHTGCGCC
>gi|56695694|ref|YP_166045.1| 6-phosphogluconate dehydrogenase domain-containing protein [Ruegeria pomeroyi DSS-3]
MAKVAFLGLGVMGYPMAGHLKSAGHDVTVYNRSAAKAEKWVTQHGGAMATTPRAAAEGAEFVMACVGNDD
DLRSVCAGPDGALAGMAAGSVFVDHTTVSAKVTRELYAAARDGGVGFVDAPVSGGQAGAENGVLSVMCGG
DQAEYDRAEPVIAAYARICRRIGESGAGQVTKMCNQIAIAGLVQGLAESLHFAEKAGLDGRAVVEVISQG
AAGSWQMANRYETMLDDHWTHGFAVDWMRKDLGICLDTANETGASLPVTALVDQFYKDVQKMGGGRWDTS
SLLARLRKLD
>gi|56695695|ref|YP_166046.1| Cu(I)-responsive transcriptional regulator [Ruegeria pomeroyi DSS-3]
MNIGDVASRTGLPAKTIRYYEEIGLITPQRDLNGYRRFREQDLHKLTFLGRARALGFTIEDCRTLLALYE
DQSRASADVKQVARDHLARIETKIADLIAMRDTLTELVDACAGDNRPDCPILRDLGGAV
>gi|56695696|ref|YP_166047.1| copper-translocating P-type ATPase [Ruegeria pomeroyi DSS-3]
MSAQTTSLKITGMSCAGCVGRVERALLAVPGVAEASVNFATKTAQVHHDSPVAALTQAAAGAGYPAEVSE
TTLTVEGLSCASCVGRVERALNAAPGVVEAQVNLATRTARVSYVTGSTDPAALAAVSTAAGYAARPEGGA
EDGGEEPSDEAAILKRQTLLAILLALPVFLIEMGGHMIPALHHWIMATIGQQTSYLIQFALTTVLLFGPG
RVFYAKGFPALLRGAPDMNALVALGTGAAYGFSLVATFAPGLLPAGTANVYYEAAAVIVALILLGRWLEA
RARGRTGAAIEALVGLQPRHARIERNGQPVEVEIADIQPGDTLLIRPGDRIPADARVLDGQSHVDESMIT
GEPVPVTKSAGDTLVGGTVNGAGALRARAEKVGADTVLAQIIRMVEQAQGAKLPIQSVVDRITLWFVPIV
MGVAALTVLVWLAFGPSPALGHALVAGVAVLIIACPCAMGLATPTSIMVGTGRAAELGVLFRKGDALQRL
QEARVIAFDKTGTLTLGRPELTDLTTADGFERDSVLRLAAAVEAQSEHPIAEAITRAAEGDLLAAEAFES
LTGLGARARVAGQDVLIGADRLFDREGIALGPLRETGAALAAEGKTPLYAAIDGRAAAVLAVSDPVKPGT
AEAIERFHRMGLSVAMITGDNTRTAQALAAKLGIDAVTAEVMPEGKVAALDALRADHGALAFVGDGINDA
PALAHADTGIAVGTGTDVAIEAADVVLMSGDLRGVANALEVSRATMRNIRQNLGWAFGYNVLLIPVAAGV
LYPFGGPMLSPVLAAGAMALSSVFVVTNALRLRRVRAALPATRQAAAPAPAAAPAPAE
>gi|56695697|ref|YP_166048.1| short chain dehydrogenase/reductase family oxidoreductase [Ruegeria pomeroyi DSS-3]
MKRAVISGGAGGLGRALSDALQTRGWHVTLLDRDISAIEPSETQRVIQCDLTDPGQLAAACALAIGPQGV
DLAVYNAGITQIGLFADSDEASHRRVFEINYFAAVNMARAMLGPVRQARGTHLAISSVAGFAPLYSRTSY
AASKHALEGFFKSLRSEERAHGVAVQIAAPSFVATNLGNAQAQPDGIARPGSATDGMDYMTPEAAAATIL
RGLDRGRDMIPVGRVARLAWWINRLSPGLYQRLMESKIGRG
>gi|56695698|ref|YP_166049.1| hypothetical protein SPO0796 [Ruegeria pomeroyi DSS-3]
MSRILITGAAGMVGRALLEELDEHDVFATDLVPPKATGAVTWLPMDVTTDDPDRIVGEVRPQVVIHLASI
VTPGVARAVAHRVDVGGTRAVLDACLAHGVRRLVVTSSGAAYGYHADNPMPLRESDPLRGNPEFAYADHK
RQVEEILAEARQSAPQLEQVVLRVGTVLGAGTENQITALFRKPRLLAVRGSESPFVFIWTRDLARILARA
AGEGPAGIYNVAGDGAMGVSDLARALGKPVLRLPALTLKAALALARPLGLSRYGPEQVRFLQYRPVLAND
ALKQVFGYVPELASAEVFDLWRREAGL
>gi|56695699|ref|YP_166050.1| bile acid transporter family protein [Ruegeria pomeroyi DSS-3]
MTGIDDILLNFSPASLMLLNAILAVVMFSIAIDLTLDDFRRLSRGPKPVLVGLFSQFVVLPVLTFALVWL
TAPHPSIALGLILVAACPGGNISNFITHRAGGNAALSVSMTAFATVGAIVMTPANIALWGSLYPPTRAIL
QETHIDPVQIAITVGLMLILPLILGVTLNMRRPALTARLRRPLQLLSMGIFIAFIILALAANWGYFLSFA
GAVAGLVILHNALALGGGWVVATLTRLSPYDRRAVTIETGIQNSGLGLVLIFAFFNGLGGMAVAAAFWGI
WHAISGLGLAMIMSRTEARR
>gi|56695700|ref|YP_166051.1| monooxygenase domain-containing protein [Ruegeria pomeroyi DSS-3]
MTETCDRFALIGAGPMGLAMAKVMLEQGIAFDGFELHSDVGGLWDIDGPRSTMYESAHLISSKRMTEFTD
FPMEEAVAEYPSHRELKRYFHAFAARYGLRDHYRFGAEVLRCEPLGEPGAGWRVIWRDAEGEHTETYAGV
MIANGTLSEPNMPTFQGRFDGELIHSSAYRHPSQFDGKRVLIVGAGNSGCDIAVDAIHHGALCDLSMRRG
YYFVPKYVFGKPADTLGGMIKLPMWLKRRVDGMILKWFVGDPQKYGFPKPDYQLYESHPVVNSLVLYHAG
HGDLRIRPDIDRFDGRRVIFADGSSEEYDMILAATGYKLFYPFIDRDLLNWQGDAPHLYLNALHPERDDL
FVLGMIEASGLGWQGRHEQAEMVARYITGLRRGGAAAAELKAAKSAGFERATGGMNYLKLARMAYYVDKA
TYRGAVTGWIDRLKRAQS
>gi|56695701|ref|YP_166052.1| TetR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MFVLEKQRQRAPSARSLQTRARILDAAEQLFAARGFEGASIRDIARAAGVQGGLVAHHGGSKEELFHLVV
SRRAGELSRIRIEALETARGRGPLDLACILDCFIRPYVTLAQEGGPQWVAYGRLLAHVSADPRWSALAAE
CFDPTAQRFIAEIAALYPDAAPGQAAMGQIYAVSAMLAHVYSAWRLDTLSPGAEEAGADQLIAFATAGIH
AVMSGRAPEK
>gi|56695702|ref|YP_166053.1| choline sulfatase, putative [Ruegeria pomeroyi DSS-3]
MTNHPNLLVIVSDEHRKDAMGCAGHPIVKTPNLDALAARGTMFEAAYTPSPMCVPTRAALATGDWIHRTG
HWDSATPYAGQPRSWMHDLRDAGREVVSIGKLHFRATEDDNGFSQEILPMHVVGGIGWTVGLLRKNPPAY
EAAAELAADVGVGASSYTDYDRAITAAAEAWLADPARQERPWAAFVSLVSPHYPLTCPEEWFALYDPDQM
DLPVGYGQGLPDHAELRNIGGFFNYDAYFDAQKMREAKAAYYGLTSFMDDCVGRVLAALEAGGKADNTVV
LYVSDHGDMMGDQGFWTKQVMYEASAGVPMIAAGPGIPAGHRVSTCTSLTDIAATARELCGLAAREDLPG
LSLRSIATAPDDPDRAGFSEYHDGGSRTGTFMLRWGRWKYVHYVGEAPQLFDLERDPQELTDLAPRAAED
PDMRALLAEGEHRLRAICNPETVNARAFADQQRRIAELGGEEACRTGYSFNHTPVPQEGGAL
>gi|56695703|ref|YP_166054.1| 4-coumarate:CoA ligase [Ruegeria pomeroyi DSS-3]
MNRPARAGNPGGRIQMSILKSRFEDVALSDKSVTQRVFEGIDPDMTILIDGPSGRSYSGAQFIRAVKSLA
GGLSAHDMGAGTCVGLMMPNLPEYCIAFHGIAWAGGTITTINPTYTAPEVHHQLNDAGAQVLVTIPAFLD
TARAAIEGTGVDRIVVVGDAPEGTLALSDLMGPPLEHQAPVDVAEHVVVLPYSSGTTGMPKGVMLTHRNL
VVNIDQTLLPADLNPGEMTTAFLPFFHIYGLQVLMNIYLTAGGGLVTLPRFDLEQYLDCVIRYRTPRLWI
VPPVALALAKHPVVANYDLSCVEQVFCAAAPLGRDVAEGLGERINARVNQGYGMTELSPVSHVSPHGEGK
PGASGVAISNTECRIIDPETGTDLPLGEDGELWVRGPQVMKGYLNNEAATRATIVEGGWLRTGDIAHFDE
DGFLYITDRLKELIKYKGFQVAPAEVEAALLTHPAIADAAVIGAPDEAAGEVPLAFVVAAAGQAAPSLAE
VQAYLDTRLAHYKQVRQMQVIEQIPKSASGKILRRLLRDAQGAQA
>gi|56695704|ref|YP_166055.1| 30S ribosomal protein S1 [Ruegeria pomeroyi DSS-3]
MANASMEEFEALLNESFEMDTPEEGSVVKGKVIAIEAGQAIIDVGYKMEGRVELKEFANPGEAPEISIGD
EVEVYLRAAENARGEAVISREMARREEAWDRLEKAYADDQRVEGAIFGRVKGGFTVDLGGAVAFLPGSQV
DVRPVRDAGPLMGLKQPFQILKMDRRRGNIVVSRRAILEESRAEQRAEVIGNLTEGQTVDGVVKNITEYG
AFVDLGGVDGLLHVTDMAWRRVNHPNEILNIGETVKVQVIKINKDTHRISLGMKQLQEDPWDLVGAKYPL
ESVHTGRVTNITDYGAFVELEPGVEGLVHVSEMSWTKKNVHPGKIVSTSQEVEVMVLEIDGAKRRVSLGL
KQTMRNPWEVFAETHPEGTVVEGEVKNITEFGLFIGLPGDIDGMVHLSDLSWDERGEDAIQNYRKGDMVK
AVVSEVDIDKERISLSIKSVGGDKFAEAVGGVKRGSIITVNVTAIEDGGIEVEYEGMKSFIRRSDLSRDR
ADQRPERFSVGDKVDVRVTNVDSKTRRLGLSIKAREIAEEKEAVEQYGSSDSGASLGDILGAALKGDN
>gi|56695705|ref|YP_166056.1| NUDIX domain-containing protein [Ruegeria pomeroyi DSS-3]
MPDLAIRAFLASLVAIRSTPTGWQVLLLKRTQTLAGTWCQIAGKIEEGETAWRAALRELEEETGLTPMQL
YSADICEQFYEAHRDAITIAPVFVAFVDPDQTVRLNHEHSAHRWVSFEEAAEMVTFGGQRRVLRWVEEEF
VKRAPAEQLRIDPAG
>gi|56695706|ref|YP_166057.1| integration host factor subunit beta [Ruegeria pomeroyi DSS-3]
MIRSELIQKIADENPHLYQRDVERIVNTVFEEVTDAMARGDRVELRGFGAFSVKKRDARIGRNPRTGDTV
HVEEKHVPFFKTGKLLRDRLNGKA
>gi|56695707|ref|YP_166058.1| hypothetical protein SPO0805 [Ruegeria pomeroyi DSS-3]
MMRYIRYAFLATLGILLVSVSLANRQMVTLSLLPEDLAHLLGVNFSLTLPLFLVVLGGIAAGVVIGFVWE
WLREHKHRRTADVKHREVRKLEREVKSLKKKQNEGKDEVLAILDDAAA
>gi|56695708|ref|YP_166059.1| N-(5'-phosphoribosyl)anthranilate isomerase [Ruegeria pomeroyi DSS-3]
MADDIRVKICGLSDPEHLRVAAEAGARYMGFVFFAKSPRHLTVERAAELAVSVPVGVAKVALVVNANDAE
LEAITTAVPLDMLQLHGKESPERVAEIKARFGLPVMKAVGVAEAADLAQIDLYSEVADQLLIDAKPPQGA
ELPGGNGLAFDWRLLAGRKYWRKPWMLAGGLTPENVGEAIRLTGARQVDVSSGVETTPGVKDAGLIREFL
AAARAD
>gi|56695709|ref|YP_166060.1| hypothetical protein SPO0807 [Ruegeria pomeroyi DSS-3]
MVRRKVRDMERMVGREAFLAEIRRRGFTAVENAGQVIVFCNAEPVRLVTARPQTFKESL
>gi|56695710|ref|YP_166061.1| tryptophan synthase subunit beta [Ruegeria pomeroyi DSS-3]
MANDLFNSFMSGPDEQGRFGIFGGRFVSETLMPLILSLEEEYEKAKTDPSFWAEMDDLWTNYVGRPSPLY
FAERLTEHLGGAKVYMKRDELNHTGAHKINNVLGQIILARRMGKTRIIAETGAGQHGVATATVCAKFGLK
CVVYMGAHDVRRQAPNVFRMRLLGAEVIPVTSGRGTLKDAMNDALRDWVTNVRDTFYCIGTVAGPHPYPA
MVRDFQSIIGKEAKEQMMKAEGRLPDTIIAAIGGGSNAMGLFYPFLDDTSVNIIGVEAGGKGVNEKMEHC
ASLTGGRPGVLHGNRTYLLQDDDGQILEGYSISAGLDYPGIGPEHSWLHEVGRAKYVSITDMEALEAFKL
CCATEGIIPALEPSHALAHVMKLAPELPKDHIIIMNMCGRGDKDIFTVAKFLGFDMSDTEGRDAED
>gi|56695711|ref|YP_166062.1| hypothetical protein SPO0809 [Ruegeria pomeroyi DSS-3]
MTPDPSLNVLGGALAPCSTDPVTGFFRDGHCNTCVQDQGSHTVCAVMTAEFLAYSKYVGNDLSTPRREFG
FAGLKPGDRWCLCAARFMQAADEGCGPQVHLEATHRRALEVVPLEVLQRHAIGRD
>gi|56695712|ref|YP_166063.1| 6-aminohexanoate-dimer hydrolase, putative [Ruegeria pomeroyi DSS-3]
MRVFGKWLGRALLALILAAGVIGVWKWEEINRLLAVNSLFNAEKIVANFSHMDAAFLTAPVARGNGPTSD
LPHGAAYELPTGGTDWIEERAVTSLLVMKDGQIRFEEYYLGTSPDDRRISWSVAKSYLSALLGVLLEEGA
IASIDDPVVKYVPQLKGSAYEPASIRNVLNMASGVTFDEDYFDKNSDINRMGRVVALGGTLDDFAASFTD
SFAAPGETWQYVSIDTHVIGMVIRGATGRSVTDLLTEKILAPLGLERDGYYITDGAGVAFVLGGLNFTTR
DYARFGQMILQDGSYGGKQVVPAGWIAASTAASAPTAAGKIGYGYQWWIPVGAGPGEFLARGVYGQYIYF
DQPRGVMIVTTGADRGFRGEGVNEANIEMFRKIAQSL
>gi|56695713|ref|YP_166064.1| peptidyl-tRNA hydrolase [Ruegeria pomeroyi DSS-3]
MRLFVGLGNPGAKYARNRHNIGFMALDRIAEDHGFGPWRVKFQGQIAEGRLGREKVLLLKPETFMNRSGQ
SVGEAMRFYKLDSTDITVLHDELDLAPGKVKVKAGGGHAGHNGLRSIHDHIGAAYDRVRLGIGHPGRKEA
VAGYVLHDFARADEDWLEDVLRGVSEGAPHLAAGDGARFMNSVALRTAPPRPSTGTGRPPAKTPARAEEP
PAPAASPAPATAPLPDARSPLQKLVDRFK
>gi|56695714|ref|YP_166065.1| 50S ribosomal protein L25/general stress protein Ctc [Ruegeria pomeroyi DSS-3]
MAGEIPDLVALERTGTGKGAARQARRDGMVPGIVFGGDNEPLPIQIPFNRLLKMLKAGRFKSTLFNLKVE
GHEDVRVICRDVQRDVVKDLPTHLDLMRLRRTSRIKLFIHVDFVNHAAAPGLKKGGVLTVVRPEVELEVT
AGDIPESITVDLTGLNIGDVVTISSVTLPAGAKPTVERDFVIANISAPSGLAASAAEEEDEEGESEE
>gi|56695715|ref|YP_166066.1| L-lactate dehydrogenase, putative [Ruegeria pomeroyi DSS-3]
MAVITNIEDLKRIYERRVPRMFYDYAESGSWTEQTFRENSSDFDLIRLRQRVAVDMSGRSTASQMVGQDV
AMPVALAPVGLTGMQHADGEIKAARAANEFGVPFTLSTMSINSIEEVAEATGRPFWFQLYTMRDTDYTSR
LIQRAKAANCSALVITLDLQILGQRHKDLKNGLSAPPKLTPRTIANLMTKWAWGIEMLGAKRRNFGNIVG
HVHGVSDTANLGAWTAEQFDPTLDWGKVAKLMEQWDGKVILKGILDAEDAKMAAKLGADAIVVSNHGGRQ
LDGALSSIRVLPEIMDAVGGDIEVHLDSGIRSGQDVLKALALGAKGTMIGRAFVYGLGAMGQKGVTTALE
VIRKELDTTMALCGERNVADLGRHNLLVPEDFGGRWA
>gi|56695716|ref|YP_166067.1| MaoC domain-containing protein [Ruegeria pomeroyi DSS-3]
MTMYWEDFPAGFRYESDPWEMTGEEIMDFARKWDPQPFHIDPEAAKDGPFGGIIASGWHTLVTAFERWYA
SGLWAEASMGSPGMTDVKWMVPVRPGDRLRVVATVIDSTASRSRPDRGRITVLSEIYNQDGQKVAEYSGI
NILRRRP
>gi|56695717|ref|YP_166068.1| tryptophan synthase subunit alpha [Ruegeria pomeroyi DSS-3]
MTRIDAKFAELKAQGKKAFVSYVMAGDPDFDTSLELVKGLPGAGVDIIELGLPFTDPMADGPTIQLAGQR
ALDGGMTLQRTLDLATEFRKTDNTTPIVMMGYYNPIYSRGVDRFLADAKAAGIDGLIVVDLPPEEDSELC
LPAQAAGLNFIRLATPTTDDKRLPRVLQNTSGFVYYVSITGITGSAEAEATDVGPEVARIKAATDLPVIV
GFGINTPEKSRAIASVADGAVVGSAIVGQIGAGKPVAEVLAFVKTLSDGAHSA
>gi|56695718|ref|YP_166069.1| hypothetical protein SPO0816 [Ruegeria pomeroyi DSS-3]
MKQFLLTAILALGLTGTAQAQSLILGVGYADFQHNGSRDQGVLSLEYQHTPFWERGRLSARLAGAATVHN
NGDFHLGAGVAGEYALDRNWFIEASVLPGLYIEGEDSNTLGSRFEVRSLFGVGYRFDNGNALSLAITHKS
NASISDFNPGVNSVLLRFHRSF
>gi|56695719|ref|YP_166070.1| GTP-dependent nucleic acid-binding protein EngD [Ruegeria pomeroyi DSS-3]
MGFKMGIVGLPNVGKSTLFNALTRTAAAQAANFPFCTIEPNVGEVGVPDARLDKLAAIAKSKQIIPTRMT
FVDIAGLVKGASKGEGLGNQFLANIREVDAIAHVLRCFEDGDVTHVEGRVDPVADAETIETELMLADLES
IEKRRANLVRKLKGNDKDAQQQDRLLAVAQAALEDGKPARVVEVSDEDAKAWKMLQLLTTKPVLYVCNVG
EAEAAEGNAHSARVAEMAAAQGNSHVIISAQIEEEISQLEDDEAAMFLEEMGLEEAGLDRLIKAGYALLH
LETYFTVGPKEARAWTIRQGTAAPQAAGVIHGDFEKGFIRAETIAYDDYIACNGEQGAKEAGKMRAEGKS
YVVKDGDVLHFLFNT
>gi|56695720|ref|YP_166071.1| MAPEG family protein [Ruegeria pomeroyi DSS-3]
MGPTGSQSETAMSPDPARRRVFARIILAYPVALTAVAVLVNLVLFDPSPPVAALPASGILWALIGAAVLL
VINHSWLMTSTELTRLAHGIRTTPEEWQASAHAKSAVAEIGWQELERRQNAHRNTTENLAVFTFAALAVS
FASPDIGAAQLWILAFALARLGHGLGYLTGHDGLRGLSMSLGLIALYGLVSLPLLGLLV
>gi|56695721|ref|YP_166072.1| amidohydrolase domain-containing protein [Ruegeria pomeroyi DSS-3]
MSGKLVITNIGLLLSGKMEEPIYDGDCVIAIDGRISDWGYEGDLDTEGADTLIDANGVTLAPGLIDSHVH
PVVGDYTPRQQQLHWIDSTLHGGVTTLISAGEVHMPGRPKDIVGLKAMAIAAQRWYENFRPSGVKVMAGA
PVIEHGMVEQDFKELADAGVKLLGEVGLGTVKDGKTARQMVDWARKYGIQSTIHTGGPSIPGSGLIDADM
VLETGTDVIGHINGGHSALPDDQIMCLCESCTAGLEIVHNGNERAALLTLNTARELKQMDRIILGTDGPA
GSGVQPLGILRMVAMLSALGNVPAEIAFCFANGNTARQRELDTGLLERGYAADFVLMDQAQHAPGKTILE
SVQLGNLPGVGMTVIDGVVCSERSRNTPPATRLPRIVS
>gi|56695722|ref|YP_166073.1| CAIB/BAIF family protein [Ruegeria pomeroyi DSS-3]
MSAPLQGLKVVELARILAGPWIGQTLADLGAEVLKVESPEGDDTRKWGPPFIEREGDRSAAYFHGANRGK
TSIALDFGDAGDRAKLLDLIREADVLIENFKVGGLKKFGLDYDSVKEVNPRLVYCSVTGFGQDGPYAHRA
GYDFLIQGMSGIMDLTGDPAGEPQKIGVAFADIFTGLYGVIGIQAALAERARSGMGQHVDLSLLDCMTGV
LANQAMNFLASGQCPTRLGNAHPNIVPYQVFPVADGHIIIACGNDRQYGTLCTILGVAELINDPRFATNP
DRVAHRAEMTELLTTACLKWTKADLLAALEQGGVPGGPINSVAEALADPQIAHRGMRIEPEGVPGLRTPI
RFSRSELVLDKASPKRPVRS
>gi|56695723|ref|YP_166074.1| MarR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MDDTAQHGAEPYRLDDQVGYLLRLASQRHAAIFQSQTIEGLTATQFAALVRLSEHGKCSQNQLGRLAAMD
VATIKGVVDRLRQKGLTLAEPDPGDKRRMLISLSPQGAALVARMKDAGARITADTLAPLSPTEQRSFLRL
LAKLS
>gi|56695724|ref|YP_166075.1| branched-chain amino acid ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MAACSTRRAPMLEIDGLTARYGRAQILNGVSLTLGRNEVVALLGRNGAGKSTTMKSVMGLVRQTGGSIRL
DGTNILGRASHLICRAGIGYVPEDRRIFGELTVEENLEVGRRPAREGAPHWSADHLFQLFPNLAERRQNL
GKQLSGGEQQMLSIARTLMGNPALVLLDEPSEGIAPVIVEQMANVISELKREGLSVLLSEQNLHFAREVS
DRAYIIEKGTMRYEGDFADLDARPEVSAQYLAV
>gi|56695725|ref|YP_166076.1| branched-chain amino acid ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MSPVLEVRGLSKAFGGLQAVDDVSFDLKQGEFLALIGPNGAGKTTCFNMLNGYLPPSAGSVKLNGRELIG
TPPRRIWRLGVGRTFQITATFLSMTVLENVQMALISHHRRVYDLFSRATRLFLDEAMALLDLVSMREQAD
RPCSELAYGDLKRLELAIALAHEPALLLMDEPTAGMAPSERVALMALTADIVARGHVSVVFTEHDMDVVF
AHAHRILVLNRGQLIAEGTGAEIRANPLVQEVYLGGGRLFDKEGAHA
>gi|56695726|ref|YP_166077.1| branched-chain amino acid ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MGFYLAQLLTGLANASSLFLIASGLSIIFGVTRIVNFAHGSFYMLGAYLAYTLVTTLQGGIPGYWFSVLA
AAVLVGGIGLVVELTILRRIYRAPELFQLVATFGVVLIVQDLTLAIWGAEDLLGPRAPGLDRAVRLMGEP
IPEYDLALIAIGPAVLAAIWLVFHRTRWGVLVRAATQDREMVGALGVNQAWLFSAAFVLGSALAGLGGAL
QIPREAVSLQMDLSIIGEAFVVVVIGGMGSVTGAFVAAVLISVLNAFAILIFPQISIVLPFVVMAAVLIV
RPYGLFGRPGSEHGGAEEPEQPLRLLDQRSTMVLLALVAMLAFSPAVVSDFTTILLVDVMVATLFAVSLH
FMMGVGGMVSFGHAAYFGVGAYAAAMATKMLGWGMLPSMALGPVAAALAALFFGWFCVRLSGVYLAMLTM
AAAQILWGVTFQWQDVTGGDDGILGVWPAAWAKSDQVYFYLALVLCLGGIWLLRRVAHSPFGYTLRGVRD
SRIRAEAIGIDTRFHQWMGFTLAGTLAGLAGAVFVFSKGSVFPDALSIGHSIDGLIMVLLGGIHALAGPV
YGAMAMVLIEDWVSRLDYWRFIFGGIILTVVLLAPDGIAGGVRRLIQLVRRDAA
>gi|56695727|ref|YP_166078.1| branched-chain amino acid ABC transporter, periplasmic substrate-binding protein [Ruegeria pomeroyi DSS-3]
MSLAACPTGGPPRQRPEQPARLRPTDQPEGNDMTLIRRTVLGALAALPLAALTPQIARAADTIVLGEVNS
YTRLPAFTEPYKKGWELAIEQINAAGGVLGKDLVVVSRDDTGDPATAIRIAEELIAKEGAVMIFGTFLSN
IGLAVADFANQKQVFFLASEPLSDALVWSKGNKYTYRLRPSTHMQAAMLAEQAAKLDAVKWATVAPNYAY
GQDAVAAFKAELTRLRPDVQFVEEQWPPVFKIDAGPTVRAIEAAKPDAIYNVTFGGDLAKFVREGSLRYL
FDDRPVVSLLTGEPEYLEPLQGETPNGWIVTGYPSTDIDTPEHKAFAEAYIAKFGEAPKTGSIVGYNSVL
SIAAAITKAGSTETEAMLAAMEGLEVSSSPTGPFMFRAADHQSTMGAYVGKTALVDGQPKMVDWFYADGA
AYLPSEEEAAKLRPAE
>gi|56695728|ref|YP_166079.1| hypothetical protein SPO0826 [Ruegeria pomeroyi DSS-3]
MTKIRKIAVFIEETRIEAGREISPPTRKAVAVAVIENPFAGRYVEDLTELMDTGAELGALLGERCVQALG
IRPEQAESYGKSAMVGENGELEHAAAILHPKLGAPLRKAVEKGAALVPSSKKMGSPGQVLDVPLGHKDAA
YVRSHFDGIEVRLNDAPRANEIMVAVAVTDSGRPLPRVGGLTHDAAEGKDGLR
>gi|56695729|ref|YP_166080.1| hypothetical protein SPO0827 [Ruegeria pomeroyi DSS-3]
MPLPDLILRKTVSALEEIWHEGGPVAATPLRRASVMSILKNPFAGRYEPEIQGFMEDLKPLGLSMAQQLL
DMLGGPERIEGYGKGALIGEAGELEHGALWHAPGGYAMRQLLGSANAIVPSSKKVGGVGARLDVPITHIN
ASYVRSHFDSMEVGCNDAPRADEMALVLVMSTGPRVHSRSGGLEAWQIKGEDGLR
>gi|56695730|ref|YP_166081.1| hypothetical protein SPO0828 [Ruegeria pomeroyi DSS-3]
MTRAVAALLPDGKRLHLQHGPIDLIIGAEGGPGAREAAFVTATARFETVLAELVGELPLLKTELAPDAPL
PLGPVARRMDTACRPLMALRLTRMAAVAGAVADEVLAAMLSSTPLTRAYVNNGGDIALHLTGDTRFTLAM
ATPDGRDLGRISLGTGDRIGGIATSGLGGRSLSLGIAESVTVLAPSAAGADAAATLIANATDLPGHPAIR
RAPANTVKDDSDLGQRPVVTHCGPLDRNEVLHALENGRKLAVEMIANGHIRSAHLSLRGQSCQAGAIPVI
APERRLALA
>gi|56695731|ref|YP_166082.1| hypothetical protein SPO0829 [Ruegeria pomeroyi DSS-3]
MTERIRPEKIRCDACPVLCYIADGKSGACDRYANHGGELVRLDALTVIESGSTRVVPFLKDAQTGDDWDG
NIVQQNRAFVTAVGAGTTYPDYKPAPFIVSQQVEGVDMVTVVTEGIFSYCGVKVKIDTDRHIGHERDVVR
VDGEPIGHVMTSEYGSKMLSLGGVEHLTGGSKKEGRVTCDALLRLCNCEAVEMVIGEPGHETTLIVQAGR
APIINGVEEKLMRVGCGSAAIGMFAKQWLGHADDVVVVDDHITGVLSEHQAGKMLDVPPTGIRIKGRRST
PGRYFQVADPGTGWGGTNVEDPLVILNAFKPDVAWPGLRLMMVSTTGEQFAYYELDADLVPQPVPIPEKL
RASAELIAENCEPSVCSVLFMGGAGGSLRAGVTENPVRLTKSVKSSLTHVSCGGAAAYVWPGGGITVMVD
VTEMPSNSFGYVPTPALVAPMEFTMRVSDYGTLGGHVSEIKPVAQVISERDRKLGKRDSQPDPNARENYR
WSRGEDE
>gi|56695732|ref|YP_166083.1| xanthine dehydrogenase family protein, small/large subunits [Ruegeria pomeroyi DSS-3]
MMDRPLSTTTDFTLNGALTSASPQPGERLSRMLRERCGAREVKVGCDAGDCGACTVLVDGAPVCACLTPA
HQVAGRRVDTLRGLSNDPVAERLSDSFLAHGAAQCGICTPGMMVATTALLRETPEPTETQVLDALGGVLC
RCTGYRKIIQAVMRAGAPLLAAPAGDGHSGTAIPRLDGAGKVAGTEAYGDDVAPAGTLEILLVGAPYPRA
GFTLGDIESWRSAHAGVVSVLTAADLPGRNRFGVMPGFEDQPVFAETETRFRGEPVAAIVAPPEVAATLD
LALFPVTWTRLDAVENIADATAPGAPQLHPDRAGNVMVTGFVACGDAEAALAASGVVVEARYATPFVEHA
YIEPEAGYAYLDGDKVVVHACTQAPVLDRDGLQMVLGLGPDRIRIIPTGVGGGFGAKLDMSVQPYLAIAA
LKTGQPVRLAYSRVQSMQMSTKRHPSELHLRIGASTDGRLKGFSLQGRFNTGAYASWGPTVANRVPVHGS
GPYFIRDYRAEAQGVHTHCPPSGAFRGFGVPQAAIAQETLFDELAEKLGLDPLEFRLINALATGQPTVCG
QVFTQGVGIRACLQALKPDWTRERAAAEAFNAGNTVLKHGVGIAAGWYGCGNTSLPNPSTIKCGIRADGT
LVLHQGAMDIGQGANTVITQLFATALGIPTHRIELIGPDTDLTPDAGKTSASRQTFVTGNAARLAGAALR
AAILTRVNAGPEATLTLDQGRIHVTDTDRAHVIDLTDLPADADGYVLGATETYDPPTKPLDKNGQGVPYA
QFGYAAHLAVVEIDTRLGTIRPLRFTAAHDVGHAVNPALVEGQVEGGIAQGLGMALMEEYIPGRTDNLHD
YLIPTIGDVPPIETLIIEDPDEHGPYGAKGLGEHALIPTAPALLNAIRHATGVAIRQTPVTPARLRAALK
EAGHD
>gi|56695733|ref|YP_166084.1| xanthine dehydrogenase family protein, medium subunit [Ruegeria pomeroyi DSS-3]
MAYHAPALLKDALDRLAKGDVRVVAGGTDVYPAQGTAPFDRDILDLTRITALQGISRGAEGWRIGATTTW
TQIARADLPPAFDGLRAAAREVGSIQIQNAGTVAGNLCNASPAADGVPPLLTLEARVELTSSTGQRVLPL
AEFLTGVRRTALQPGELVSALLLPNPPTHARGAFTKLGARRYLVISIAMVAVVVGCDARGRIDHACVAVG
ACSPVAQRLSRLEADLIGQRPQDVTVGQGHLAPLSPIDDIRGSAGYRLDAVAEQIIRAIRAAGGQ
>gi|56695734|ref|YP_166085.1| LysR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MLSALARHRHFAKAAEECGISQPAFSMRIRNLEERLGVTIVRRANRFQGLTDEGEMIVRRARRILGDAKA
LEQEVAAIRGEISGALILGVIPTALAFTGRLVRRLHQAHPRIVARIDSMSATAIQQGLDEGTIDAGITYG
DSIGTDLRHVQPLYEETYVLLVPAHLTEATGPIPWARVADFPLCLLEPQMQNRRILDRIFAEQGLHPRIV
AETSGFTAAMVMAREGLAATVVPRVLIRALGDLRGTRVLPLVDPEVSKPIALATLERDPELPTVTALRQV
VASLR
>gi|56695735|ref|YP_166086.1| formate dehydrogenase, beta subunit [Ruegeria pomeroyi DSS-3]
MAPLDSKSAGGEPGVWKSGRGRGRRLPKGRVYSDEALAAVRGVLGDRPRRRDLLIEFLHLIQDVYGHLSA
DHLAALAFEMKLGQAEVYETATFYAHFDVVKEGETPPPALTIRVCDSLSCALAGAEQLRAALEEGLDPGQ
VRVLRAPCMGRCDTAPVLELGHNHIDHATPEKVRAAIAAGDTHAHLPDYEGFDAYAAAGGYAVLKGLRAG
GDWEAVQDSVLAAGLRGLGGAGFPSGRKWGFVRANPGPRYLAVNGDEGEPGTFKDRYYLERVPHLFLEGM
LIAAWAVEAETCYIYMRDEYPAVLEILRREIAALEAAGIVAKGYIDLRRGAGAYICGEESAMIESIEGKR
GLPRHRPPFVAQVGLFGRPTLVHNIETLHWVARVCREGPEVLNSIEKNGRKGLRSYSVSGRVARPGVHLL
PAGSTIRDVIAAAGGMAAGHVFKAYQPGGPSSGLLPASMDDIPLDFDTLQPHGSFIGSAAVVVLSQQDSA
RDAALNMLRFFEDESCGQCTPCRAGCEKAVKLMQAEHWDQPLLEELCQVMADASICGLGQAAPNPIRLTM
KHFAEEI
>gi|56695736|ref|YP_166087.1| formate dehydrogenase, alpha subunit [Ruegeria pomeroyi DSS-3]
MADGAHVEMVSFTLNGEEVTVPEGLTIWEAAHGRGLVIPHLCHKPDPGYRPDGNCRACMVEVAGERTLVA
SCIRPVAEGMVVTTDSARAEGARKMVVELLLADQPEVAHDASSHFHAMAGLNGVSESRFPAKTPDSVPLL
DASHVAMRVNLDACINCNLCVRACREVQVNDVIGMAGRGAGAQVVFDQNDPMGASTCVACGECVQACPTG
ALMPATVLDAEQAGDSKDYDREVTSVCPFCGVGCQLSFKVKDNKIKYVTGVDGPANESRLCVKGRFGFDY
IDHPHRLTKPLIRRADAPKGLNVDPGNPLSHFREASWEEALDFAARGLADLRAQKGSYVAGFGSAKCSNE
EAYLFQKLIRQGFGHNNVDHCTRLCHASSVSALLENVGSGAVTATFNEIENADVAIVIGCNPIENHPVAA
TYFKQFTKRGGKLIVCDPRGVGMGRFATHRLQFKPGADVSMLNAMMHVIVEEGLYDQAYIDQFTENWEEM
KAHLADYSPEKMEPICGIAAGELRDAARTFAAGKAGMIFWGMGVSQHIHGTDNSRCLISLALMTGNVGKP
GAGLHPLRGQNNVQGASDAGLIPMFLPDYQSVTDDGVRSAFTSVWNSGDFSNQKGLTVVEIMHAIHDGDI
RGMYILGENPAMSDPDVDHARAALAMLEHLVVQDIFLTETANYADVILPASAWAEKTGTVTNTNRQVQMG
RPAVAPPGQAKEDWWIEVELARRLGLDWNYSHPSEVFAEMKRNMKSLDNITWARLEGEAVTYPSLSPEDP
GQAIVFGDGFPRANKRARFTPAKIVEPDERPDADYPFVLITGRQLEHWHTGSMTRRASVLDAVEPEANCS
MHPATLRAMGIEPGDMIRLTTRRGSVQVMVRADRAIAQDNVFLPFAYVEAAANILTNAALDPYGKIPEFK
YAAVKVEKAEALAAE
>gi|56695737|ref|YP_166088.1| cyclase, putative [Ruegeria pomeroyi DSS-3]
MPRGALMSRRFVDLSVPLETGIVSDPPIMLPEIEYLTHDQTAEQVMSFFPGLKREDLPGGEGWAVERLSV
ATHNGTHLDAPYHHHSTMNNGARAITIDEVPLDWCFNPGVKLDFRHFPDGYVVSAEDVEAELARIGHEVQ
PLDIVVVNTSAGARYGQPDYLVKGCGMGREATLYLTERGVRVTGTDAWSWDAPFALTARAYADSGDAAII
WEGHRASMEIGYCHMEKLANLDQLPPTGFTISCFPFKIKGASAGFTRAVAIFED
>gi|56695738|ref|YP_166089.1| hypothetical protein SPO0836 [Ruegeria pomeroyi DSS-3]
MSEQEPHSGHDGPYPAPVEVRGFAVRPEWIDYNGHMNVGYYGVAFDQALDVMLEEHLGLGKTYAETAGAG
PYILQSHVQFRRELLEGEAFHLYFRLLDHDAKRLIYFGQMFADRDGALCATQEALIMNVSQQTGRGAPFP
AWAQARLARMRADHAALPGHPAIGATLALRR
>gi|56695739|ref|YP_166090.1| hypothetical protein SPO0837 [Ruegeria pomeroyi DSS-3]
MCRCCGRIALHAIDRGTRGRRLSLLGRREGAKAMEATGKSERLNRIVDTARVHFGRPVCKVTAPGGENRS
SFRLHFDDMDVIATLRPNVRRTHLEAFVLERLRAHCDDLPECLGVVGEVLFQSDVGGRRLNQEIMRHTET
GRLDLAAQAAAAIFRIHSAARRADLHQMLPHLGGSETWISNLVAAVDSLQPYSMGIDARFDRAAAAERLA
CPGGQFVKWDCRSGNAALDRAGRLRWFDFEYCGLRHGAEDFAWLIGDEAWPIAPDQMVDVMIDAFDPGCG
HRIDTYLDYLSVYLTFHCVQRFKLIVKEARTRGWLSKARVRKYDDAGVHPEFAMQICSVGAYFAAQSPVT
APLARNFEGAVDSFREILREGRSLKSA
>gi|56695740|ref|YP_166091.1| sugar transferase [Ruegeria pomeroyi DSS-3]
MKDYIHTASLAVPMPVASGQGNRARSALEAALLPANTNAPLEKRGGAFSPANGVYATVGKRCLDVAFILL
SLPVALVIIGLCALALRLEGGSAFYRQPRLGRDGKRFQILKLRTMVMDADARLERMLAADPAMRAEWDAT
QKLKHDPRITRVGNFLRRTSLDELPQLWNVLTGDMSLVGPRPMMPEQLPLYGPAESYFALRPGITGLWQV
SERNNSRFDYRAKSDADYASTLSLRGDLSLLLRTTSVVVRRTGC
>gi|56695741|ref|YP_166092.1| exopolysaccharide biosynthesis domain-containing protein [Ruegeria pomeroyi DSS-3]
MAYHDRDLAPETETVALMNDQTTGIGKRAAAERPFRRKAALRAEAAAPRVEKVMSPSKPMPLPEPEVVAS
LPATLPEPWERLRATPLGLGRRQVGQMPLVNLHRSDPAAKAFDVLRTRLLQTLKARGWRRIGIVAPTRGC
GASFTAVNLALSIARVPDSRTVLLDMNMRDPGLAGALGLGAPGDMRALLRGDVSYLDHLTRCSGTLAVGL
GAGVAGDASELLQAPASAEVLDLIQDELNPDVVICDLPAILAHDDLAAFLPRLDGVLLVADGTQTTADQI
RRCQQVIGDTTPLLGVILNRGRGTGAENYAL
>gi|56695742|ref|YP_166093.1| chain length determinant protein, putative [Ruegeria pomeroyi DSS-3]
MTGMGPIYSLEDILDMIRRRARVMLAVVVIGTMLSLVFALMQKHEYEAYEVIQIARPVVSDELARSTVEG
SSARRLQLIQQVLTTRGTMLEIIDKYGIYADIPALRPQAKVDMLRTAVRIEGVAAAREGFSDDGTISVLT
ITARMPTAVLAQQVAHEFGQRTVELSKRTRIENARATLAFFDAQAAALETDIEALEGEIEEFRSHNQLAL
PGVLDARRDEIATINGGLLDIARDRIEIERAIQLAEQSERPATAERLKKDYREQLATLDAQRALLDSRKR
ELELQIETSPEVERMLGTYDRRLEQLQDELNQVSTRRNEAEMGFLIEAERQAERLTVIEEAAIPDYPVTE
SRKKKAILGAAASFVAAFALAVLLEMRHPVLRSAGQLERELGFRPVVTVPYLDGDRRAPSLWSRLMSRFR
RRRTPAE
>gi|56695743|ref|YP_166094.1| polysaccharide biosynthesis protein [Ruegeria pomeroyi DSS-3]
MPRLLSAFHGSGLMARVLRSASWLMVGYGGSQALRLAANLLMTRLLYPEAFGLMTLVTVVVVGLNLFSDV
GIGPAIAQNPRGDDPDFLNTAWTIQVGRGIGLFTVACLLAVPVSRIYDEPDLTTYLPVAAVALLISGFFP
TRIETAHRHLIVGRLTVLDLISQLIGIGAMAALAIATRSVMALALGGVITALAKLILTHFLLPGAANRFR
WEPAARSELMRFGKWIFLSTALTFVISQGDRAILGRYLTMEMLGIYNIGYFLGSFPIMLGLAVVGRIMLP
VYRDHPPDADPANWRRLARLRAGVTLGVGMPLVAVALAGPQLVDLLYDPRYQLAGPMVTLISLAFIPQLI
VVTYDIVALARGDSLSYFALMLVRALMQVGAILLGLWAFGMLGAILSLAAATLATYPAVLWLTGKYGARD
LRHDIIAIVLGGIAAVAVIRFHWAEIAPLVPL
>gi|56695744|ref|YP_166095.1| glycosyl transferase, group 1 family protein [Ruegeria pomeroyi DSS-3]
MIIAYVLNTYPQPSHSFIRREIQALERQGHQVVRLAMRRAEAPLVDVRDRAEAEQTSYVLDRRVLGLGGA
LLRRFLRAPGRGLAALRLALRCGRASSSGMARHLIYLAEAAEVANRCETDGVGHIHAHFGTNSATVAMLA
HALGGPGYSFTVHGPEEFDAPGALSLGEKLDRARFAVGVSQFGRSQLCRWAAFDSWDHLHVVHCGIEPEA
FADPEPAPEGPLRLVSIGRFVEQKGQMVLVHAMVRLVRRHPQVHLDLVGDGEMRPALERAIAKAGLQGNI
TLTGWLDQDGVRAALDRAHALVMPSFAEGLPMVVMEAMAAARPVVATYVAGTPELVLPGETGWLVPAGDD
AALAEALAGLAETPVARLQAMGETGRARVLTRHAIDDQAGKLADLIASFEG
>gi|56695745|ref|YP_166096.1| glycosyl transferase, group 2 family protein [Ruegeria pomeroyi DSS-3]
MSRWLSVILPAHDEAEWIGACARSVLASDPLPRGWRGEVLVVANGCSDDTAARARAFADQAAARGWDWQV
LELAEGGKLGALTAGDAAARGELRAYLDADVQLDPALLARLVAALETEAPRYASGAPRVARAKSPITRLY
ARFWQGLPFVTTGVPGFGLFAVNTAGRARWGDWPDIISDDTFVRLSFTPQERLRVEAGYDWPMVEGFANL
VRVRRRQDAGVAEVARLYPHLMKNDDTPGLGLGGLLGHLLRDPLGFAVYATVAIAVRTPLYRPRSHWDRG
R
>gi|56695746|ref|YP_166097.1| hypothetical protein SPO0844 [Ruegeria pomeroyi DSS-3]
MSWISSLIGILFIGHSLFGPTNPQMLSQVLQGRDVRVAAQIINGAPLSYQWDNGAKAEGVNARSVLPGGG
FNVVILTEGIPLANQMQYNDSIGSARRYYDLALSANPDTRVFLQETWHDLRSGSGVDIPYDEGDDVPWRE
RIEADLPRWQSIVDGVNATRPEGASPMQLLPAGQAMLALTDAIAAGTVPGIDRIAQLFSDDIHPNDLGFY
FLTMVQYAAVTGESPVGLPRRLQDRWGKAYDTPERALAQRLQEVAWTVVQGFEAPEPPAPQPVAPPDEPT
SEPAAAEQAGEPAEPRQGFVAPPVPEGTVPVAIGLAGVNDWSVQQPFLDVFKTARPWIGHLPRQWGGVDH
AQLQEAGYLDPQGWVMAIPPELGSVGTLILTDLPEEAVSTAGRYVLRFAGQGVVEVSGRAGNVRYGKNSV
SFDFTPGPGSVDIRIQRTHRGGDYVRDISVVKEEHLAAYQAGGLFNPLWLDRLMGFRALRFMDWMQTNDS
QQSAWADRPRPEEFTWAMKGVPLEVMIELLNRTGADGWFNMPHLADDDYIRRFAEMVRDDLWVEQRAYVE
LSNEVWNWQFTQAQWAEDQARARWNKKDHWVSYYATRAVEMADIWAQVFGDQAEARLIRVISTQTGWLGL
EEMILDAPIWTAEEPGRATPATHFDAYAVTGYFGGTLGWEDRLPLVRQWLVDSHAAAEAQADAQGLSGAA
RDDYVAKHRYDLASALAWAEVRDGAASGKVEDTLLGNLGERLPYQAEVARRYGLDLIIYEGGSHVVGSGP
LVDDAELAAFLMHFNYTPEMGELYTDLIRGWHALGGGLFTAYADVYRPNKWGSWGHLRHLDDDNPRWDAL
VEFLK
>gi|56695747|ref|YP_166098.1| hypothetical protein SPO0845 [Ruegeria pomeroyi DSS-3]
MLRVVLPTLLILAILSAGLWWGWLRPRLPDSGAIDAAYARPLPPPAGPMRVFHLGHSLVGQDMPAMLQQL
APPGHDYASQLGWGTTLKAHWEPDEGINGFDQMNDHPRYRAADSALRSGSYDAVVLTEMVELTDAIKYFD
SDRYFSKWAGLARQARPDTRVFLYETWHWLDDPDGWLNRLDRDLVTLWENEILLRDLARNPDNPAHVIPV
GQVLSRFVRALEARGGVPGIDGPEALFARDDQGQLDPIHMGDLGNYLIALTHYAVLYQTSPVGLPHQLNR
ADGSPALAPSPEAARLMQDTVWQTVTSYPKTGVPQ
>gi|56695748|ref|YP_166099.1| phosphopantetheinyl transferase PptA, putative [Ruegeria pomeroyi DSS-3]
MTGAAASGALMLAAPLLDRRVALAATDPAGPYEAYPEELAALPRATEKRTREFAAGRAAARLSLRELGAP
ALAIPMGADRAPVWPPGLLGSITHTDTACLAATAWEGEFRLLGLDMEPDTPLDADLLETVCTPAERAWLA
TQDEAGHWAKLIFSAKEAAYKAQHRLSHALIGFDALELRIDAPGQSFVATFQSDVPPFVRGEALHGRFAR
GGGLIVTALAVAA
>gi|56695749|ref|YP_166100.1| non-ribosomal peptide synthetase [Ruegeria pomeroyi DSS-3]
MSLSHVVIGNESLLIGCSEMLLDRGHKIAAVVSTDAEIAAWARGKGLAHMRDLSDLDRHLAGAGFDWLLS
IANLRVIPEALLALPRQGAINFHDGPLPRYAGLNTPAWALMAGETRYGVTWHLIEGGIDEGDILAQQMFD
IAEDDTAFSLNSKCYGAALDSFARVAGQLEQGLERQAQDLSQRSYFGRDARPAAAGRLDFTKPAATLAAL
VRALDFGDYANPLTCAKILAGGRVLAVGRARAEGRSGALPGTVLSSSSDSLTLACGEGDLVLSGLRALDG
APVDLAALVPEGQRLPALSAAESAALDRALAAALPAERHWRLPLAAMRPLPVPLAGSSAPGIPGPHRISV
PHGLDDAALMAAVVVWALRSSGEEFGDLALTTGAMQQAAAEGYINGWVPLQAALTSTRADLIGWIEQTVE
AARAKGAPPADLLLRDPRIAHRDTPQVALALDGAGPVPGAALTVALDRGQATLFADAARLDPRRTEILAR
RLETAMHAMGRARATDTAAALPVLPASERSTMLSDWNRSARDYDRALTVHRAFEDQAARTPEAPALVFEG
QTLSYAALNARANAVAARLREMGAGPGSHIGIYLDRSPELLIAALAALKAGGAYVPLDPAYPADRIAHYV
SDSRAAIIVSTGTRAQSLPKTQAQILDLGPLAGARQPENVDGCASADDLAYVIYTSGSTGTPKGVMVEHR
NVANFFAGMDDRIDHALGGVWLAVTSLSFDISVLELFWTLARGFKVVLSSDENRAEVSKGPIAVSDRPID
FNLMYWGNDDGQGPKKYELLLEGAKFADAHGFNAVWTPERHFHAFGGPYPNPSVTGAAVAAVTKNLSVRA
GSCVAPLHHPARIAEEWAVIDNLTGGRAALGIASGWQPDDFILRPENTPPRNKPAMFETIETLRRLWRGE
AVEFAKADGTMHSVVTQPRPVSKELPLWVTTAGNPETWREAGSIGANVLTHLLGQSIDEVAEKIRIYHAA
LREAGHDPAGFKVTLMLHTYLADTREEAARIAREPMKDYLRSAAGLIKQYAWAFPAFKKPKGVTNAFEMD
LGVLSGDELEAILDFAFERYFEDSGLFGTIGDAVARVEQLKRIGVDEVACLIDYGIDPAVVLEGLKPLAE
VLRRVRAPSALAEDDFSLAAQIVRHGVTHMQCTPSMARMIAMNDEARLALGRVKHLLLGGEALPGDLVED
LREATGARILNMYGPTETTIWSTCALVPPRAEGTVDIGQPIANTTVYVLDGSGQPCPIGVPGELHIGGEG
VTRGYWQRPELTAERFPRDPFAAEAGLTVTAAPQMYRTGDLVRWRADGQLDFLGRSDHQVKIRGQRIELG
EIEAAMAAYPGVTGAVVIAREMGGDTRLVGYVTTGGPVSDAALRAHLAARLTEVMVPAHIVTLDAFPLTP
NKKIDRKALPEPVQQRAAPSAPSEPASGAEAQIAAIWSRILGVGDIRADDNFFTLGGHSLLAVQAHREIR
AALNVPNLPITDIFRFPTLGGLAAHLSQGSAPDEPTPPAVDSEERASTMSRRRAMRASRQERVR
>gi|56695750|ref|YP_166101.1| glycosyl transferase, group 2 family protein [Ruegeria pomeroyi DSS-3]
MSSATVLTVILNYRTPDLTISACEAAMREMQGLPGEIVVVDNASGDGSFEKLSKAASDYGWLASGKLRLV
QSGRNGGFGAGMNVGMTAGLSNGAAPDFYYLLNSDAWPDPGCIRGLRDFLLETPDAGLAASAVRGIDDDP
HRTAFRFPTAAGEFEAAARTGPLSRLLRERIIAPPLPARRTRVDWASGASLMIRREVIAATGGFDERFFL
YFEETDLCHRAQAEGWSTHYLPDVGVVHIGSASTGMKSWNRTPQYWFDSRLHYYLKTHGRAYAAGATLAL
VAGAMIWRLRRLLQAKPQADPDRFLSDLVTHALRAALGRPRTAPAPIAAIPEDSR
>gi|56695751|ref|YP_166102.1| non-ribosomal peptide synthase [Ruegeria pomeroyi DSS-3]
MATSETQFEQEDIAIVGMSVHVPGAQSAAEFWRNLRAGIESIRVLDDAALLEAGERPDRLADPNYVRAAA
PLDGFDRFDADFFGFSPKEAAILDPQHRQFLETAWEAMEDAGHPPETIAGPIGVYAGCGMGSYFYFNICS
NPGLVDDVGMFLLRHTGNDKDFLSTRVSHVFDLRGPSLNIQTACSTSLVAIHYACKALREGECDMALAGG
STIELPQGRGYLYKENEILSPDGHCHAFDHRAQGTVFGSGAGVVALRRLEDALADGDHIWAVIKGSAINN
DGADKAGYLAPSVGGQAQAISAALKAADVPAETIDYIECHGTGTYLGDPIEVSALTQAYREQTAESGFCR
IGSVKTNIGHLDTAAGVAGFVKTALALHHKQIPPSLGYEAPNPAIDFETSPFRVNDKLTDWTPHKGPRRG
AVNSLGVGGTNAHVILEEAPERAASDESDFPFQILCLSARSRAALDGNAKALAGWLRANPDVNLADVAYT
LKEGRRGFEKRRVLVAETALEAADLLDQGDPRRVFTHDALGAGADVVFMFPGGGAQYAGMARDLYEVEPV
FAEWMDRGLAHLQQSLDYDIRAIWLPDGDTAEADAKLQQPSVQLPLIMIVEYALAQLWLSWGVRPAALVG
HSMGENTAACLAGVIAFEDCIDLVLLRGRLFDTVAPGGMLSISLPLDEVQALIGEDLDIASVNAPRLTAV
SGPQAALDRLAAVLKAREVEYQRIQIDIAAHSRMLEPILKEYGDFLRGLTLSAPQIPIQSNRSGAVLSEA
EATSPDYWVAQLRNTVHFADCIAGLSSDPDRVFLEVGPGKALSSLAQMCPGVTPGQVLSSLRHPDQEIAD
DAYFLGVIGRLWACGVEADWPQIWGEAHRRRLPLPTYAFQRSRYFIEPGTRQAEAPRALPARSDDLSQWG
WRPVWRPRLADCDIDTATELAEAAPRNWLFFMDETGLAEAAAQRLEGVGHHVTRVRSGDSYARLTDGSYT
LAPEQGRMGYDLLLRDLDEQQRLPDRIGHFWLVTEAERFRPGSSFHDRNMEHGFFGLTWLAQALGQVDLP
GALHITVFTSGAARLRDEGLAYPEKATIAGPMGVLPHEMPGLTCATVDIELPARLRPPLFARLRGAAPEQ
DEDLTPALLEELLVEPGNAFAARRDGKRYARSYRPAPLTDAGPAFRDGGTYLITGGFGGIGLTLARHLMD
HHGANVILLGRDPLPTDPAAWLAGHSPADRTSRRLRALAELEALERGEVMAIAADVANIDQMRRALTLAE
DRFGALTGVIHAAGHIADGPALAKTEADLHRVLSPKMTGLRVLDELFPDGVLELMVLCASSSTASRPAGQ
VDYVAANEYLNAFADSRQGGATRVVAVNWGVWADVGMAADARAARLGTGHDTARSPTGLPLLHEAGFDEA
GNRLFVSRLSAEDWVFDEHRTADGTALLPGTGYLELAAQALHAQGITHPYDIRDLYFFRPLRVNGTPREV
VVRLEDAPDGVAFSVWSALPGGGYAQNAQARLVPAPGAQAEPLDLAAIATRCPEAQSAAPNAVLHSPQER
HLQFGPRWQVLRATARGTGEGLARLALPEAYRGDLDKGYRMHPGLLDLATGWAIELAAGYDDTTLWVPVS
YRSIRVHAPLPAEIRSWMRLTPDQASVAGHASFDITLSDATGAVLVEIEGFQMQRTSGTIDLSDPERPDA
DARALGLEPARQSTPLSPEEQRLHHNIAQGIRAEEGAEALVRALGTGLPQLVVSSLDLPRLIAEADQVAA
PAEAGQSFDRPELDTDYVAPATETEKTLAGFFETLLGVSKVGTQDSFFDLGGHSLIAVRLFAQINRAFAV
EFPISLLFEAPSVEAIATRIDARLGRSGTGDSPETAEASAPDLTHVVPLHQAAGGHASPFFVVAGMFGNV
LNLRHLALMLGRDRTVYGLQARGLVGEDAPHETIPEAARDYIAEMRQVQPHGPYLLGGFSGGGIIAYEIA
QQLRDAGEEVALLVLLDTPLPQRPPLGRSDKALIKLQQFRERGPRYLVDWVKARFAWEVQRRRGPAQDSG
GGAFNNTRIEAAFLRSAAGYALRPWEGATVLFRPPLERLWQVSGGNWVNHERHYVYPDNDWGRWIAALEV
IEVPGDHDSMVLVPNVSVLAEHLRGQLNAIDKPGALPHAAE
>gi|56695752|ref|YP_166103.1| hypothetical protein SPO0850 [Ruegeria pomeroyi DSS-3]
MPIRMRPIRQEQMPNPVAYLMLMLWPIACAFLFTRLPLQRAIIWGILGAYLILPPVAEFDLPLVPSMNKD
SIAAVSTFLACLFVARKRVPLIPDSWPVRVLLFSFVLCAVPTVLTNREPLIFEMAMQAEPIRFFTNYVPG
MGLRDLLSIILSQLIILLPFFLGRAHLADEAGLRNLVLAMAVAGLAYSLPSIFEILFAPVLNIHIYGFFQ
HDFNQMIREGGFRPIVFMPHGLWLAFFMTTAVLSVAALTRHSRAKIRERWAGALIYMLLVLNACKSLAAL
GYGLALTPVVLFLRRKAVLRIALGIAALAIAYPALRNIGVIPLDAILERAAAISAERAQSLEFRFTNEEQ
LLDRAHLKPWFGWGGWNRNLVLDDETGLIITIPDGAWIIAFGTFGWLGYIAKMGLLAAPIAMMTWQSRKM
KSAEISDFAAPLALILAATMTDMLLNDTLTPFTWLCAGAVLGYVEQLRRPVAEPGRRQQARAPVLGRHVP
SDETRPVL
>gi|56695753|ref|YP_166104.1| WecB/TagA/CpsF family glycosyl transferase [Ruegeria pomeroyi DSS-3]
MEFSFGTDRVSVNMPTREALMGEVGRRFRAGEGFALATINLDHLVKLGCDPVFARAYAGQDLVVADGRPI
VALARLAQRPVELMPGSDLVRPLCALAAAERVPVALVGSSDEALGDAKRVLEAETPGLDIAWTHAPEYGF
DPEGAAAETILMELATRRIGLCFLALGAPRQERLALRGRALAPGVGFASVGAGLDFLGGHQRRAPLWMRK
LALEWLWRMLSDPLRLAPRYARCAAILPGHMVRALRLRGR
>gi|56695754|ref|YP_166105.1| Gfo/Idh/MocA family oxidoreductase [Ruegeria pomeroyi DSS-3]
MTTPPLRIGLIGAGYIAAWHADALRAVPGVKLTAVCDPNMDLAEGLAAAHGARAFGDLDDLIGAGLCDGV
HILTPPDLHHPLALHCLRAGLHVLVEKPVALNAAQTQEIEDAARAANRRFHAGHNFLGLPSYTRLKREIR
RGALGRVSGAEIRWCYPFGPLRAGPFGIWPLRDTRNLMLEFGPHLMSLVIDLFGLPEIEHVALSKPVALP
GAGTRPQGWRILARAGEVELVLILSLVETADDRSVTIRGSSARARLDLAADTLVIDAENTADLVANPLLR
QLSLARQHLVQGSVNAARQLTSFNRKSPYALSFRGLANGIWEPLAQNAPADPRWSGSSAVAVMTALDAVL
ERVDWPAPVPASPSRKPAPSAMVIGGTGFIGRALTRELVARGSDVRVISRGRQGSFADLPDQVETVSLSL
RDTEGLARAMAGIDTVYNLARSTDSSWEDCLQNDVAVAEGIGKAALAAGVRRLVYTGTIASFDMSDPAAT
ITDATPLPDEMDERNLYARSKAECERRLMALHRQSALPLVIARPGIVLGAGGPLQHWGIGRWHGAGAVRL
WGNGRNPLPFVLIGDCVDGLIRCAEAEGIEGRAFNLVGPPILSARDYFDAIHDRLGARIRVSGGNLSLMY
AADWVKFQLKTRVLGRSGLTRPSRADWLSRAHQSRFDISGARSALGWHPVSDADAFLTNAVDEAGLLGF
>gi|56695755|ref|YP_166106.1| glycosyl transferase, group 2 family protein [Ruegeria pomeroyi DSS-3]
MSVDLVLIGRNEGERLLRALRAARGQARRLIYVDSGSTDGSVAAARAAGALVVELDMSIPFSAARARNAG
FEAAQAKDPAPFVQFIDGDCALVPGWLAAAEARLSQDDALGLVTGWRSEIAPEASLYNRICDHEWRRPAG
PIVACGGDMMVRAEAFAQAGGFDPTVIAAEDDDFCLRLARAGWQLERLPLEMTRHDAAMTRFAQWWRRAV
RAGHGFAQVGLRHPGHFRTEQRRVLAWGLVLPLIALLGATRGPVVPVLVALLYALSWLRSAKGLRAEGMP
APEARKQAFLLTLSKFPNLIGMGKYWLTHLARRRPRIIEYQ
>gi|56695756|ref|YP_166107.1| glycosyl transferase, group 1 family protein [Ruegeria pomeroyi DSS-3]
MRITFLSPRSNLSGGLRVIAIYARMLRARGHEVTLVTPARAQPGRRQKLRALLRGQASNSPEPPGHLDTL
DLPVIETARADFHVDPDEIPDADVIVATWWETAFAAAAMPPEKGRKFYLIQHHEVHDFLPWQISRATYYL
PLTPIVISNWLDGILRRTYGRDDARLVPNGIDLTQFHAPERGKAARPTVGFLYSPHPIKGSDTALAAIAL
LRQRFPDLHVVAFGAEPVTPDLPLPPGADFHLRPAQERIRDIYAACDVFLCASTAEGFFLPLLEAMACRT
PLVSTRVGAAEDLIEPGVTGYLADVGDASALAEGAAHILSLPDGEWRAMSARNHKIAQGQSWDHACDLLE
SVLSGEGRS
>gi|56695757|ref|YP_166108.1| xylulokinase [Ruegeria pomeroyi DSS-3]
MFIGLDLGTSGVRAILVRPDGSVLDSAEAGLQASHPHPGWSEQDPDDWLSAARAALVALAQRHPLAMGRV
AGLGLSGQMHGAVLLDAAGAVIRPAILWNDSRSFAEAAELDRTEAVRDLSGNIVFPGFTAPKLAWLAKHE
PRSFARVAKVLLPKDYLAFWLTGILGSEMSDAAGTAWLDVGARDWSDRLLEAGSMRRDQMPDLREGTGTV
GPVRPDLAADLGLPDGVQVVAGGADNAAAACGVGALAEGDGFVSLGTSGVLLAARNGFHPDPASAVHTFC
HAVPGRWYQMGVILAATDSLNWLARITGAKAPTLTAELGALGAPGPVRFLPYLSGERTPHNDAAVRGAFL
HLDIAQDRTDLTRAVVEGVSFALRDSLDALRATGADLPRLLAIGGGTRSRYWVELLATVLGLPLDLPEQG
ENGAALGAARLAICGVTGADPAQVMTRPAVAETIDPRADLLEAYEQAHADFAATYPKLKALP
>gi|56695758|ref|YP_166109.1| xylose isomerase [Ruegeria pomeroyi DSS-3]
MTEFFADIAPVRYEGPDSANPLAFRHYDPDEMVMGKRMEDHLRFAVAYWHSFAWEGGDPFGGQTLIRPWH
PQDDMTRAKVKADAAFEMFDILGVPYFCWHDADIRPEAATFAESLRNFEEIIDHFLAKMESRRTRLLWGT
ANMFSHRRWMAGASTNPDPDVFAYAAATVKTCLDATQRMGGQNYVLWGGREGYETLLNTDMGRELDHMGR
FLSMVVDYKHKIGFKGAILVEPKPQEPSKHQYDFDAATCIGFLRKYGLEGEVKLNLEQGHAILAGHSFEH
EIAVAASEGMLGSIDMNRNDYQSGWDTDQFPNNVPEVALCYYHILRAGGFTTGGTNFDAKLRRQSLDATD
LIAAHVGGMDICARGLKAAAAMIEDGGLETALRDRYAGWDSDHGQGILESDLDSLFARVLAGEIDPQPHS
GRQEMLENHVNRFV
>gi|56695759|ref|YP_166110.1| aldose 1-epimerase [Ruegeria pomeroyi DSS-3]
MLEGGDVSVAILNRGCITQDWQVPLRGTRVPVVLGYADPADYAHNPAYLGVIAGRVANRISGAAFTLDGQ
RYDLPANEAPNHIHGGPEGLHTRLWEMEADGARAVRLTLVSPHGEGGYPGRLDLTVTIRLEGDALTYDIR
AVSDRPTLLNLAQHSYYSLGAETCRDFHVTLPASRHTPNDAARIPTGEIVPVTDRPFDFRNGRSIAEADP
ERQGLDMNFVLDRGQARVTGNGLVLEIETDQPCLQLYSGQHLNPLHPPLPGQSHAPFAGLCLEPQGYPNA
VNTPGFPCPLVTPDHPYRQRTTVRIREQDAA
>gi|56695760|ref|YP_166111.1| methylamine utilization protein MauG, putative [Ruegeria pomeroyi DSS-3]
MRRLVALLTFVAGPLLAEPLPRADAIFAEPAMEAVRLGQLLFYDPILSGNRTISCASCHHPRFGTSDGVS
LGLGDGAVGIGPDMRLDPQNPPEQRIPRNAPALFNLGAAEFTRFFHDGRLESDPTRPSGIRTPLGPDMEQ
GFASALAAQAMFPVLSGDEMAGHYSENDVAQAVRQGRLTGPGGAWAILAARIEAIPDYRRSFDAVIGPRP
VTFADIANVIADFMVFEWRADDSPFDRFLRGEGDLPEVAKAGMDLFYGKARCATCHAGQFQTDHAFHAIA
MPQIGPGKAARFERHNRDIGRMRVTGDPADAYAFRTPSLRNVTATAPYGHSGAYASLRAVVEHHLDPVAS
LEAYDIASALLPGPGFASDRAVLDDPAEMAAIAASNRLEPIRLTEAEVDALLAFLDTLTDPVALSGRLGI
PDSVPSGLAVAR
>gi|56695761|ref|YP_166112.1| FG-GAP repeat-containing protein [Ruegeria pomeroyi DSS-3]
MRPELFALALGATPAVAEPMFHPVPVPEHVYAGGWEHFVGGGLAVFDCDGDGLPELLAAGGENPATLLRN
RSDAGALRFEADTPEALTEPGMTGAYPLDIDSDGTMDLVVLRVGSNQLLRGGADCSFAPFEGLGFTSDDR
WTTAFSATWETGQSLPTLAFGNYVDRSNPNGPFGTCDTNLLYRPEGDRYGPPIELTPGYCPLSMLFSDWA
RQGRADLRVSNDRHYYVSDGEEQMWAIGSTPRLLGPADGWLSHKLWGMGIAQRDLDRDGRQEVFLSSMGD
QRLQRMTGNGAEFTDVPYAMGTTAHRPYTGGDGRPSTGWHIGFGDVQNDGLDDVFITKGNVEQMPDAAME
DPNNLLIQQPDGTFAEAGDRAGIASLHRGRGGALVDLDGDGRLDIAVVNRRAPMEIWQNVTPETGNWLAL
ALEQPGPNRAAIGGWIEVTTTGAPQLREIMVGGGHAGGMAGFEHFGLADAGEIGIRVIWPDGAKSETVYV
GPNQALTLIRTAKGLKARR
>gi|56695762|ref|YP_166113.1| xylose repressor, putative [Ruegeria pomeroyi DSS-3]
MQREYGRRTLLHQIRRAGRIPRIELADLTGISRATVTTITAELLSRGLIEEVQRDESGPDSRRGRPRVDL
KIRGAAHLLVGVKVSHHKLSLVLLDFEGEQLAAKECDLPAPVNAPEALADAIRDAVAHLATTAGRRAEEI
SGVGVGIAGIVEATDGFVHWSPSLSVRNVDLGALLTRTLGTPCFIDNDANLVAVAEQTFGLGREHKDFLV
VTIESGVGLGMVIGGALYRGTRGCGAEFGHTKVQLNGALCRCGQRGCLEAYVADYALLREATLVSGLPPT
GDPGTRIETLLDAARTGDATARSILDRAGQIFAMGLANLVNIFDPELIILAGEQMQLDHLYADAVIEAMR
KSIVQVDKPPPEVVVHKWGDLMWARGAAAYALEQVSELALDRLDEDAA
>gi|56695763|ref|YP_166114.1| xylose ABC transporter, periplasmic xylose-binding protein [Ruegeria pomeroyi DSS-3]
MKLFATAAAVIAGAVMSTSALAQDVVVGVSWSNFQEERWKTDEAAIKAELESKGAKYISADAQSSSAKQL
SDVESLIAQGATALIILAQDAQAIGPAVQAAADEGIPVVGYDRLIEDSRAFYLTFDNVEVGRMQARAVLE
AAPSGRYVMIKGSPTDPNADFLRGGQQEVLQAAIDKGDITIVGEAYTDGWLPANAQRNMEQILTATDNGV
DAVVASNDGTAGGVVAALTAQGMEGLPVSGQDGDHAALNRVAKGTQTVSVWKDARDLGRAAARIAVSLAE
GTQMNAIGGADDWTSPGGTKMNAMFLEPLPITKDNLSVVVDAGWITQETLCQGVTNGPAPCN
>gi|56695764|ref|YP_166115.1| xylose ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MTHSEAELSPAHPKKSFVQTLELDLRLLGMIGAFAILCVGFDIVTGGRFLTPRNIFNLTIQTVSVAIMAT
GMVFVIVTRHIDLSVGALLATCSAVMAMTQTEILPNMLGLGLGHPLIPWVTILVGLLVGSLIGAFHGWLV
GYLAIPAFIVTLGGLLVWRNVGWYLTSGKTIGPLDPTFMQFGGINGTLGATWSWIVGLLALAAALYGLWA
SRKNKLRHGFPVKPLWAEGVLAALISGAILGFVAILNAYEVPLARLKRDFAAQGLTLPEGYTEAYGIPIS
VLLLIFIAVGMTMLARRTRLGRYIFATGGNPDAAELSGINTRLLTVKIFALMGALCAISAVVASARLTNH
SNDIGTLDELRVIAAAVIGGTALAGGFGTIHGAILGALIMQSLQSGMAMVGVDAPLQNIVVGAVLVLAVL
IDILYRRKTGAR
>gi|56695765|ref|YP_166116.1| xylose ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MMIDRTGTPLVEMRDICISFGGVHAVDHVSVDLYPGEVVGLLGHNGAGKSTLIKILSGAYQMDSGEIRIN
GDRAEIHNPRDARRYNIETIYQTLALADNLDAASNLFLGRELVTPFGLVDDDAMEAETRKIMARLNPNFK
KFNEPVSALSGGQRQSVAIARAVYFDARILIMDEPTAALGPHETQMVAELIEQLKAQGIGIFLISHDIHD
VMKLCDRASVMKNGQLVGTVDVDKVTDDDLLGMIILGKHPGEQAEA
>gi|56695766|ref|YP_166117.1| glucokinase, putative [Ruegeria pomeroyi DSS-3]
MTVLVADVGGTNTRVALASAGQLVHLARFANDAYGSFAEVLTAYARGRDLPGLRGVCVAVAGPVANGRAE
LTNRNWHFDTAELAAPLPGQGDVAARLINDLVALGHALPGLTAAQLDVIRAGAVQPSNDQALVAGLGTGF
NTCLLKGGAVVEAELGHASLPLAIAEELRAQLGDAAGGFRTNECLFSGRGLSRLHAILSGQDRRGQDILA
DYAIGEDPQAAATVTLTARLLGLFARELVFQYLPFRGIHFAGGAARGILGSAARAEFLSAFEADGRFADH
LDRVPVRLIADDAAALSGAARLMEECA
>gi|56695767|ref|YP_166118.1| Gfo/Idh/MocA family oxidoreductase [Ruegeria pomeroyi DSS-3]
MRMSAPLFRWGILSTAKIAREQVMPAIARSETGVIHAIASRDAGRAQAQAARFSAARWYDGYDALLSDPD
VDGVYIPLPTAQHVEWAIRAAEAGKHVLCEKPIALRAEQIDRIIAARDATGRVVSEAFMVWYHPQWHKVR
DLIASGAIGALRQVTGGFSYHNTDPDNMRNRPELGGGALPDIGVYPVVTTLLATGGEMRRAEARVAYSPE
FGTDILARATVGFDGFDLDFHVATQMAAYQSMLFFGETGWIDVRTPFNAGLYGFDEVVLHDQKALSRQVF
RFPGINQYEAQVDAFVRATRGAGAVFPLEMSRRVQEVIDAIYAAGTPRRA
>gi|56695768|ref|YP_166119.1| gamma-glutamyltranspeptidase, putative [Ruegeria pomeroyi DSS-3]
MRFTTRPEIAGTFAVATSTHWIASAVGMGVLERGGNAFDAAAAMGFVLQVVEPHLNGPLGDMPMLIKPAG
DVVPTMVCGQGTAPAGATIAHYRSEGLTRIPGSGLLATVIPGAFDAWMLMLRDYGTLPLRDILEPAIHYA
RAGHPALPRVAATIAGLAEFFRAEWPSSHETWLPGGSAPRAGALMKNPALADTWTRLLAESETVSGREAQ
IEAARAAFYRGFVAESIDRYLRHACVMDAAGGRRKGVLSGEDMACWQASYEAPISTRYKDWTVWKGGPWT
QGPALLQSLHLLDGFDLDAIDLNGAEFVHLVSEAMKLSFADREAYYGDPEHSDIPMSALLSARYGEARRG
LIGERASTEQRPGLVEGYESWVAAALRHAREDYASAGGTGAGEPTMAHLSQRKGDTVHLDVIDRWGNMVS
ATPSGGWLQSAPVVPGLGMPLNSRAQMFWLEEGLPTSLAPGRRPRTTLSPSMARGPDGTELAFGTPGGDQ
QDQWQLIYFLRLVHGGLNLQEAIDAPLFHTNHFQSSFYPREVQPGHLMVEPALGEAAIAELRARGHRVEV
AEPWSVGRLTAASRLSDGTLRAAATPRLMQAYAIGR
>gi|56695769|ref|YP_166120.1| hypothetical protein SPO0867 [Ruegeria pomeroyi DSS-3]
MKPVVYPLAFALTLSSAVAQTQSLEESGGLLVDFLEDTLSGEGRNIRVRGLSGALSARATIEEITVADAD
GVWLTIRAAELDWNRLALLRGRFSVNTLTAAEIDIARAPLPAPAELELPDAAATPFQVPELPVAVELGEL
GVETLTLGAPLLGVAATLSIGGNLTLADGALDTTLSVTRLDRPGDKVDLVAGFANETRQITLDLTLTEAA
GGLIATTLAIPDAPALMLSAKGAGPVDDFTADIGLSSDAVERVSGQVRLRGTGDDTAPGIAFAADLGGDV
TPLLDAAFDPFFGADTRLGIEGVSLADGALRLDRFDLRSDALDLSGALALAAGGALERAVLDGRITPPDG
TRVTLPVPDQRITLGAARLAGRYDRAQGDGWSLNLSAEALDTPDLRLDLARIDASGTLTPGAGGPTLAGR
IEAALSGMGFADPALNSALGTALTLEGGFELPPERDLSLSGLTLRGADFTATADAVIDGLTSGFEMDGTV
SLTATDLSHFSGLAGRDLGGVAQARLTGTGAPLSGSFDFVLDVDGRDLKTGMAEADPLLTGNSRLHLDAL
RDDTGMTVRKLTLDAAAGRITAQARVTQPGGELALDGSLRIDTPDLAPFSALAGRPLSGGAVADITGNVA
RLGEEFDLSIDLSGQNLSSGMAEIDPLLAGASRIGLDARRAGNSLTLRRFTLDAPVLTAQVQGEVTGLTT
EAVFDGTARIEAPDLAPFSALAGLELGGRIRAGLEGRSALNGERFDLSLALDATDLRTGIAQADALIAGQ
TRLEFDGSRDAGGMDIRHFDLDGSALSAEASGAFRGTGSNLRFAARLDELSRVTPSVSGPLQLSGTLSPT
ATGLRSEVELLGPDSSFARLNGTVDTDGAADLAFDAELARLERFVPDLAGALKAVGTATRASGIWTVAGN
ARGPAGITADVAGTFDEAKGAADMTATGQLSLGAANKALAPNKIEGTARFDLALRGTPGLGALSGTITTA
ESALAIPDLGQTITGIGGTVTLADSAARIDIRGGVRAGGGFTVSGPVSLLPPFDGQIAVRLNDLVLTDNL
SYDSRLGGQITLSGPLTGNSRLAGQIEVGETNINLNTASGAVGAAPIPEGMVHQREPAAVRATRQRAKLI
DSGNGNGGRTSMALDIAINAPGKVYARGRGLNAEMGGRIHIGGTSAAVVPSGQIGLIRGDFNILGRRLKL
TKGVVTLQGDLTPYVEFASTATTSEGQATLRIIGPLDQPEVRVTADPDRPSEEALAMLLFGNQFSQLSPF
VIAQMAASLATLSGHGGDVAKGARDKTGADTVEIGTDAGGVGRLGAGAYLSDNLYTDFTVNIEGDTEVNL
NLDVTDNLTLKGMVDNAGDTSLGIFFERDY
>gi|56695770|ref|YP_166121.1| OMP85 family outer membrane protein [Ruegeria pomeroyi DSS-3]
MNLTGPLGARLRGLVTAGLLLVPVNASALEAVLTAPGASEELQDRLRQSSAALSASARGQDSPLELLSSA
LSDYRTLVQVLYDAGHFSPVVHIRLDGREAAAIDPFSTPARIERIEIAVDPGPAFRFGTARVEPLSAETR
LSDAFAPGQPATTGAIRDAAQTGILGWREAGYAKARIGDQRIVVRHAPAELDAEIRLLPGPKLRFGQMVV
QGDSDVRPEAIARIAGFPSGQVYSPDQVQRVGTRLRRTGAFALVSLTEHENPNPDGTLDFNATFEDLPKR
RITFGAELSSRDGLDLSAIWIHRNLFGAAERLRLEATVRNIGGTEDIDGRIGFRLDRPDRLGPDDSIFYI
GEAERRNRTHYQITRAVLGIGARRTFSDTLYAEAGVGFNYGDADDAYGSGRKFRYFGLRSTVEWDKRDNK
VSATRGFYLNAGLDPFIGLSGSKSGARLTADGRAYWDFNTEGRFVLAGRLQIGSVLGPSQSEISPELLFF
SGGAGTVRGQPYESLGLPVGGNIAGGKSFVGLSTEVRGKVTEKISLVGFYDFGTVGASSFITSGSDSHAG
AGLGIRYDLGGLGPLRLDLAYPTSGNTDGGLQFYLGIGQAF
>gi|56695771|ref|YP_166122.1| hypothetical protein SPO0869 [Ruegeria pomeroyi DSS-3]
MYDLAVFWDWLAFGVRWLHVITAIAWIGSSFYFIALDLGLRKAPDLPPGAHGEEWQVHGGGFYHIRKFLV
APERMPEHLTWFKWESYATWLSGFALLMIVYWVGGELYLVDQSKAELALWQGILISAATLSIGWLVYDRL
CKSGLAERPTLLMLLLFVLLVVMGWALNQVFTGRAMMLHLGAFTATIMSANVFFIIIPNQKIVVADLMAG
RAPDPKYGKIAKLRSTHNNYLTLPVLFLMLSNHYPLAFATQYNWIIAALVFLMGVTIRHYFNSLHARTGN
PTWTWLVTALLFLAIIWLSTAPMHQPLEEAEAMPMTAQEQRLAAAPGFDQAHDVVLGRCSMCHAREPVWE
GILWAPKGVLLETEGDIARNARAIYLQSGVSHAMPPANVTYMEPEDRAAIIAWYRAATR
>gi|56695772|ref|YP_166123.1| LysR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MSYLDNIRTFVRVYELGSMSAAGRDLRISPAVTSARISQLEDHLNVRLFQRTTRNLTPTEQGRAFYPGAV
AVLDAVDEAEAQVMHLTEAPRGSLFVAAPLGLGRRLLAPNVPDFLAQYPEIDIRLRLTDRTIDLTTEGLD
LAFFLGQPEDSNLRIRKIADCRRVLCAAPDYVKRRGLPATGQDLITGRHECLNLRFPGATEFQWLLQTAE
GPRRFAVSGRHECDDGDVLTDWALTGQGIAMKPVFEVAEHLKAGRLVPVAVDTPPVTVQMACLYTHRRHQ
DPKTRLFMEFMIERVGRAVKAAESAAA
>gi|56695773|ref|YP_166124.1| transthyretin family protein [Ruegeria pomeroyi DSS-3]
MTGYLTTHVLDTARGCPAAGLRITLCRIENSARHKIVEMLTNADGRTDAPILPQESFSPGIYELEFAAGD
YLRATGQDGVEPLFLDVVPIRFGISDPEAHYHVPLLLSPFGYSTYRGS
>gi|56695774|ref|YP_166125.1| polysaccharide deacetylase family protein [Ruegeria pomeroyi DSS-3]
MTAPRYPRDMIGYGATPPNANWPGNARIAVQIVLNYEEGGENNILHGDAASEAFLSEIVGAAPWPGQRHW
NMETIYEYGARAGFWRLHRLMRDLPVTVYGVATALARSPDQVAAMKSAGWEIASHGLKWVEHKDMPEEEE
RAQIAEAIRLHTEVTGSRPRGWYTGRCSMNTVRLASEAGIDYIADTYDDDLPYWKRIDGRDQLIVPYTLD
CNDMRFATPQGFNSGDQFFAYLKDSFDALYAEGGEGAPKMLSIGLHCRLIGRPGRVMALKRFLDYARGHE
DVWFATRLQIAEHWVREHPPVARTRPSEMPKADFVAAYGGIFEHSPWIAERAHGLELGPAHDTAGGLHNA
LCRMFRSASAEERLGVLTAHPDLAGKLAQAKRLTAESTSEQASAGLDALTDEERTTFTRLNTEYVARFGF
PFIIAVRDHDKASILAAFQRRIGNDRETEFAEACRQVERIAEFRLRDVLPS
>gi|56695775|ref|YP_166126.1| ureidoglycolate hydrolase [Ruegeria pomeroyi DSS-3]
MSRRIVTEPITVAGFAPFGDLLSVSGAPDKIINQGQCGRYHDRARLDFADGRAGISLFDANPRALPYTLD
MVERHPDGSQAFIPMSHQPFLVIVAPDEDGRPGTPRAFVTEPGQAVNYHRGTWHGVLSPLAAPGLFAVVD
RIGPGANLEEFWFDDPWEVVAG
>gi|56695776|ref|YP_166127.1| xanthine/uracil permease family protein [Ruegeria pomeroyi DSS-3]
MADTSIGTPEQLRDPNYTPPLIKAVPLGIQHVLAMFVSNVTPAIIVAGAAGFGFGSNSPDFPELLYLIQM
SMLFAGVATLLQTVTLGPVGAGLPIVQGTSFAFLPIMIPLVAGKGVDALAALFGGAILGGLFHFCLGFFI
GRIRFALPPLVTGLVVTMIGLALVKVGIQYAAGGVPAIGTPEYGSALNWSAALVVILVTLGLKFFARGML
SVSAVLLGLIVGYVYALMVGMVTFEAIGTSWSRAAGFALPVPFKYGFEFSLAAVIGFAMMAVVSAIETVG
DVSGITKGGAGREASDNEIAGATYADGLGTAVAGLFGGFPNTSFSQNVGLIAMTGVMSRHVVTIGALFLI
LCGLVPKVGAIIRTVPIEVLGGGVIVMFGMVVAAGVSMLSDVHWNRRNMVIFAIALSVGLGLQLEPGAVQ
HLPDTARILMTSGLLPAAVIAIVLNLILPQELGEEATEEVSGGMDGHGRR
>gi|56695777|ref|YP_166128.1| glyceraldehyde-3-phosphate dehydrogenase, type I [Ruegeria pomeroyi DSS-3]
MKLAINGFGRIGRTILRQLLAAPRATDIDLVLINDIAPLDTCAYLFEYDSTFGPWRGDVATGADSLIVDG
LAIPVTHSADLARVDLSDVDVLLDCTGIARSSDVAARGLSAGAGKVLISGPSPAAEITVVLGANEALLGN
ARIVSNASCTTNGLAPLARMIDDIAGITSAHMTTIHCYTNSQPMVDAPRGDLARSRAGALSMVPTTSSAT
HLIDEVLPHLAGRISGAAVRVPTASVSAVDLVVQLDRAMTPEQFDAALRAAVEASPVLGWTDKPLVSSDL
RARPESLVIAGPETRMVGDKQVRVFGWYDNEWGFSARMLDIARLMAV
>gi|56695778|ref|YP_166129.1| hypothetical protein SPO0876 [Ruegeria pomeroyi DSS-3]
MAHPSYYAPQGGHPGQEQLLTDRAMFTQAYAVIPKGTMRDIVTSKLPFWQGTRAWILARPLSGFAETFSH
YIMEVQPGGGSDRPDTDPGAQAVLFVVEGAVTLTLDGAEHVLEPGGYAYIPAGHPWRLRNHAGPAARFHW
IRKAYEAVEGIDPPTPFVIREQDVTPNEMPGTEGRWSTTRFVDPEDMRHDMHVTIVNFLPGGVIPFAETH
VMEHGLYVLEGKAVYRLNQDWVEVEAGDYMWLRAFCPQACYAGGPGPFRYLLYKDVNRHMALPRR
>gi|56695779|ref|YP_166130.1| hypothetical protein SPO0877 [Ruegeria pomeroyi DSS-3]
MGECNDRLAGNRAGRCGAGRLCGAASRDPAQGRARPACDRHPPVQRRGWRLDADAVRQGIGELCSVRDDW
LPVLCPGSRDLWEEERSGPRFTDAAVRVIVGYLCRPARLSRGLTIPCRDDHGCWMIQMQQDVRQYGDMPS
RVVVLHGGPGGAGEVEPLARELGNRGHAVLEPFQTCQTVGGQVDELSSHIERFCAPPVTVIGWSWGAWLG
CLLAAQRGMLVRRLILVGSGPFEESYASAIRTTKNSRLTKDQRKEISQLRPTEGDPAEVARFIALSDIAD
TYARDTSQQPFVAFDGAIHAAVWAEAVDMRRNGALLEAVCAIRCPVVAIHGDYDPRPSEGVQIPLRAALP
SADFVQLERCGHKPWQETFAKADFYRALEAAIV
>gi|56695780|ref|YP_166131.1| glycine cleavage system H protein [Ruegeria pomeroyi DSS-3]
MKYTEEHEWLLAEDDLIVVGITAHAAEQLGDVVFVELPEPGTEVSKDDEIVVIESVKAASDILAPLDGEI
VEVNEALIDNPGMVNEDPMGEAWFFKMRPSDLSPMDDYMDEAAYTDFIS
>gi|56695781|ref|YP_166132.1| acyl-CoA dehydrogenase family protein [Ruegeria pomeroyi DSS-3]
MNMTFAMRDENRKLLDRVAAMIRDEIMPLEEEYHAEIAKGDRWQYTARQTEILEWLKAKAKAAGLWNFWL
TDSDRGFGLTTVEYAYFAEEMGKTPLAAEVFNCSAPDTGNMEVFERYGSERMKRDWLAPLLDGQIRSAYL
MTEPDVASSDATNISMSCVRDGDDYVLNGEKYWASGAGDPRCKVYIVMVKTGGEDAPKHQRHSMIVVPAG
AEGIEILRPMLVFGHDDAPHGHMHIRFTNVRVPAENILVGEGRGFEIAQGRLGPGRIHHCMRSIGQAEIA
LERMCKRALDKEAFGKKLAHLGANYDIIAECRMEIEMARLLCLKAAWMMDQGDARAAAPWISQIKVVAPR
VSLKVIDEAMQMHGGQGISQDTPLAAAWTGQRTLRFADGPDAVHRRQIARTELKKYTQEKV
>gi|56695782|ref|YP_166133.1| hypothetical protein SPO0880 [Ruegeria pomeroyi DSS-3]
MTAPVYFTETEPGLFVGNDPARGPWSPDHCHAGPVTGLVARAAEAVAGPEKMLTRLTLDVLKPVPLAGIR
ITTEIARNSRTLTTTRLALHDTTGTLCLTGTSMHLVRKELGEVPTATVPAPDFARARPGPALLVGKLHDQ
PAFGQYIEMAYPEGEDLGPGPKTVWMKAPHLLAGEVPSPIQAICPLADCGNGISWNEPPVRFGFMNTDLT
LQIHREPQGDWFAASAVSHWQPNGIGMSQAILYDTLGPVGMALQTLVLHPMAK
>gi|56695783|ref|YP_166134.1| hypothetical protein SPO0881 [Ruegeria pomeroyi DSS-3]
MSEEKSSGRVTVRLSGKLGEMISEIQNETPAETPTDVVRRALIVYHSLAMAKLNGADLLIVEPGPDGEEK
RSRRIFL
>gi|56695784|ref|YP_166135.1| hypothetical protein SPO0882 [Ruegeria pomeroyi DSS-3]
MTGRQKGKETVPRKPDPLFDQLGPDVKSSLERNTFAGSFSPELKRAIRRFVFEVAIILVATLIIFAATKA
YAHYISDDFGGSKFPANIEQMDKHAPPTSCRKPQYWRWNSESFKI
>gi|56695785|ref|YP_166136.1| hypothetical protein SPO0883 [Ruegeria pomeroyi DSS-3]
MRRIALALSLLFPAPLTAHPHVFIDTGFELIFAPDGALTQVRVTWAYDDFYSLVILEELGMDPDGDGSLT
PEEQAQLAGFDAQWIDGYNGDLDLRLGDQPLALSGPLEPTATTEAGRIVSTHLRAVTGGGVGAGAPLSLR
PYDESYYTAYEVARPVTMSGRDDCLLERFEPDIDGQLAEMQQMLLRIDADADLEEMDIPLIGAEFATEIR
VTCPGS
>gi|56695786|ref|YP_166137.1| hypothetical protein SPO0884 [Ruegeria pomeroyi DSS-3]
MSRLVIVPVALVLALLGWFWLSGGFDQLTLWAAGEQRDFQNRIAQALRGLRSGQGEALMLLLSVCFAYGF
FHAVGPGHGKVLIGGYGLGRRVPVLRLAAIGLAASLGQAVTAIALVYTGVMVLDLGRQHLVGVTERIMAP
ASYAAIGLIGCWLVWRGARRLLATQKPTHHHHHHDGETCSHCGHKHGPSLSEVEQIGTLREALALIASIA
IRPCTGALFVLILTWQMGIALAGIAGTLAMALGTASVTVGVGLASAGLRGGVLGAASAWRFAGVALPMVE
LAAGLLVATLAGGLFLSAI
>gi|56695787|ref|YP_166138.1| alpha/beta fold family hydrolase [Ruegeria pomeroyi DSS-3]
MRRFARSTSGAGSMRVEANGIYLEVEQSGPADGVPLILIRGQGSQLVHWPKELGAGFAAAGFRTIAFDNR
DVGLSRRCPAPGVPDSADDILAALAAGADLPKPYGIEDMVDDITGLMDALGIERAHFFGISMGGAVLQQL
CIDHPGRVLSATIVMTACRPFTERAGEGREALLALAANLLVRDTSQPEYLEAQIAEHGLWGSPGYPMPEA
DIRAMAERAWARGVDAAGKNRQVLAILHAPDRRPGLRQLDLPCLVIHGRQDTLVPLEMGEEIAAHIPASE
FHAIEGMGHIITPKLAPVMVDLVRNFITRRA
>gi|56695788|ref|YP_166139.1| co-chaperonin GroES [Ruegeria pomeroyi DSS-3]
MALKPLHDRVLVRRTESEEKTAGGLIIPDSAKEKPSEGVVVACGEGARKDSGELIAMAVKSGDRVLFGKW
SGTEVTVDGEELLMMKESDIMGIIE
>gi|56695789|ref|YP_166140.1| chaperonin GroEL [Ruegeria pomeroyi DSS-3]
MAAKDVKFNTEARNKMLKGVNILADAVKVTLGPKGRNVVLDKSFGAPRITKDGVSVAKEIELEDKFENMG
AQMVKEVASRTNDEAGDGTTTATVLAQAIVREGMKSVAAGMNPMDLKRGIDLATAKVVEAIKAASRPVND
SAEVAQVGTISANGESEIGRQIAEAMQKVGNEGVITVEENKGLETETDVVEGMQFDRGYLSPYFVTNADK
MIAELEDCMILLHEKKLSSLQPMVPLLEQVIQSQKPLLIIAEDVEGEALATLVVNKLRGGLKIAAVKAPG
FGDRRKAMLQDIAILTGGQVISEDLGMKLESVTMDMLGTAKKISITKDETTIVDGAGEKAEIEARVAQIR
TQIEETTSDYDREKLQERVAKLAGGVAVIRVGGMTEVEVKERKDRVDDALNATRAAVQEGVVVGGGVALV
QAGKVLADLEGANADQTAGINIVRKAIEAPLRQIAENAGVDGAVVAGKVRESGDASFGFNAQTEEYGDMF
KFGVIDPAKVVRTALEDASSVAGLLITTEAMVADKPQKDAPAGGGMPDMGGMGGMM
>gi|56695790|ref|YP_166141.1| acetyltransferase [Ruegeria pomeroyi DSS-3]
MKPFPPAVFPDLVDALLRAAFDTGAEADLVRELRADRDIATEVTFQEHGELLGYAALSWMRSPDGWLCLA
PLAVAPGAQGRGIGSKVLQLTLKWAAERDLMIVVLGDPAYYEPRGFSQARAAELRAPYPNEHLMLAGRGS
EAPKARLVYPLALEPR
>gi|56695791|ref|YP_166142.1| hypothetical protein SPO0889 [Ruegeria pomeroyi DSS-3]
MRLFLLTALTMTAFAANSVLNRLAVAQGWADPGGFAILRVLAGAAMLTVLVLAQGQRLPLWRRRRLLGAG
SLTLYMVGFSLAYLTLDAGLGALILFGVVQIAMFGWSAATGAPPTMRQMAGAAIAFGGLVWVLWPAGAFR
VDAGGAGLMALAGIGWAAYTLAGRREADALAATGANFALALPLTAAAILPVTGVPAMSGAGLLLATVSGA
VTSGLGYALWYRLVPALGPVRAATVQLSAPVIAVLGGVLLLGETAPLRLLLGGAVLLGGIALSIRRAPDA
>gi|56695792|ref|YP_166143.1| lipase, putative [Ruegeria pomeroyi DSS-3]
MRCLPILLLCLLPGTLWADCVVLLHGLARTEASLSVMDQVFEARGLRVVRPGYPSTDMSIPDLARETLPP
AVAACGDETVHLVAHSMGGILIRYWLLSNRPAKLGRVVLLGPPNQGSELVDELGAWEVFGRLNGPAGLAL
GTGPDSVPRGLPPVDYPVGVIAGDQSLNPIFSSIIPGPDDGKVSVASTRVAGMADHMVLPVTHTFMMNNP
RVIAQTLHFIETGHFDADLSWLDAVFETIDRVCLRSECWEGPGGRER
>gi|56695793|ref|YP_166144.1| alkylphosphonate utilization protein PhnM, putative [Ruegeria pomeroyi DSS-3]
MNGVELTLTGAEVLLPGGPARRDLCLSGGQVVDAPAGRQVDLSGYLVLPGIVDLHGDGFERHMAPRRGAM
KEMGEGVVAAEAELAANGITTAVLAQFWSWEGGLRGPDFAAGVFQAIRQVQGSLVTDLIPQLRFETHLLE
DYAALPDRLAEWQVPYVVFNDHLPHDRLAEGRKPPRLAGQALKAGRSPEAHLALLQALHANGPQVPAALD
KLCAELHRRGVRMGSHDDHSAEDCATGQGRGLTISEFPETLEAAEATRASGGHVILGSPNVVRGGSHKGN
VSALDLITMGLCDALASDYHYPSPRRAALMLVRTGLLDLAAAWALVSSGPARVLGLDDRGELAPGKRADL
VILDAQSHRVAATFAAGRVSYMSGDVATRFLA
>gi|56695794|ref|YP_166145.1| phosphoribosylaminoimidazole carboxylase ATPase subunit [Ruegeria pomeroyi DSS-3]
MSEALKPGARIGILGGGQLGRMLSVAAARLGFVTHIYEPGANPPAGQVADRVTTAGYDDAEALAQFAASV
DVITYEFENIPTEALDILEAHRPIRPEREALRVSQDRLTEKSFLRDLGLMTAPFADVTDLESLEAAIAEI
GTPAILKTRRFGYDGKGQARLKAPGDAAAALADMAGAPAILEGFVQFSHEVSVIAARGLDGQVACFDPGE
NVHRDGILHTTTVPARLSAAQRTDAVLLAARILNALDYVGVMGVELFVTPAGLIVNEIAPRVHNSGHWTQ
NGCAVDQFEQHIRAVAGWPLGDGQRHTDVVMENLIGADMDRIPELARERDLALHLYGKAEAKPGRKMGHV
NRMKRNG
>gi|56695795|ref|YP_166146.1| phosphoribosylaminoimidazole carboxylase, catalytic subunit [Ruegeria pomeroyi DSS-3]
MAGVKVGIIMGSQSDWPTMKGAAEILDELGVAYEARIVSAHRTPDRLWDYGRAAVGRGLQVIIAGAGGAA
HLPGMMASKTRVPVIGVPVQTRALSGVDSLYSIVQMPKGYPVATMAIGAAGAANAGLMAAGILALQDAGL
AERLDAWRAALSASIPEEPVDE
>gi|56695796|ref|YP_166147.1| hypothetical protein SPO0894 [Ruegeria pomeroyi DSS-3]
METDLRVARMNAPSDMSMKTDEVLRVELEVFRRQHRDLDEAIAALEEKGTADQLTVKRLKKQKLRLKDII
AMLEDRLTPDIIA
>gi|56695797|ref|YP_166148.1| HSP20 family protein [Ruegeria pomeroyi DSS-3]
MSKLTLGSYPHMLGFEQLERLLERSAKSGNEGYPPYNIEQTSETSYRITLAVAGFAEADLSITVEDRQLV
IRGRQSDDSEGRVFLHRGIAARQFQRMFVLAEGVEVGEAVMENGLLHVDLSRAVPQSVVQTINIRKG
>gi|56695798|ref|YP_166149.1| hypothetical protein SPO0896 [Ruegeria pomeroyi DSS-3]
MHTPFDFKDDGDRIVYVKTVDVADLPDEVRQQAGGRDHLYAVHNAAGEQLALVADRRMAFVLARQNDLSP
VAVH
>gi|56695799|ref|YP_166150.1| PhzF family phenazine biosynthesis protein [Ruegeria pomeroyi DSS-3]
MNWYDFDWVDAFTDRPFGGNGCAVVHGGAGLPAETCMAYVRETSLVECTFTGPSDVADLKVRYFLASREI
PFAGHPTIATVAALSARGFIDKTDLVLETGAGLVPIRIFGDEIEMTQVAPQFGALVPAEQVARVIGLPTE
AIVSPPQMVSTGLPFCITVLRDRAALQAARLDVAALTAMAAGLGYDGSDMLEPFLVTLEGATEAGDTFAR
LLLAPPSPPEDPFTGSATGAMAAYLWHHGLMAKDTFIAEQGHGMGRPGQARVTRLGPPDAMTGIKVAGQG
TIVMRGQVRLPG
>gi|56695800|ref|YP_166151.1| hypothetical protein SPO0898 [Ruegeria pomeroyi DSS-3]
MSDPAIAVLPYGMKLGPALSGLPLDQVNWPLGCPERLVGKTLGDLGAGDHLLVYPRTGTHFQLSRGTRAR
ISLIMAEPAVIHAKHYALLRVTWRRFHRVLTFNQAAVDRLPNARLLLFGSTWVPEWQSLTPEKVAQCSLI
ASAKRDSTGHKLRHAVVDWVRASDQDVAVLGRGYQPFDSKADGLAPYRYSVVIENVQERNYFSEKLLDAV
FCETVPIYWGCPNIADFVDTTAMILCTREEDIRRAVAEMSAEDYAARLPALRALKQQLAPYAAHEARAAR
MILDEL
>gi|56695801|ref|YP_166152.1| hypothetical protein SPO0899 [Ruegeria pomeroyi DSS-3]
MVESNLLQGGLMHKGMRILAVLAVSLLPGFPQAAEQWEKDQIACVQNQLATLGISGVSPTGKINGATKAG
TEAIRGQYPSAAGLALLPKLSGVSAVGWCREIAALQPALRRFMPSAQPPLVTGEGGQGSMQTRLLATAFR
DVEQFFQSQYGIRPASRVDVAGAASGEVLTQLAVNLQRQRGRSIARMKDHVTDNCDSPSLRYGGQAYRNQ
LLLCWPVAKQYDKGWYSKVYPVVSSIMAHEYMHHVQRELANDKVSTGANRSQAKRGPAWMTEGTAELVEA
RWRRAKLGKGKSFAELQKAAHDHPKTLGGMHGWGSVKDAHQYRVAHFAAHLLAERYGDQAIMNYWRYIGQ
GQSWDGAFRAAFGESLSAFSSRFETLRHNTAQAKAYAAGQ
>gi|56695802|ref|YP_166153.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein [Ruegeria pomeroyi DSS-3]
MTMLSNLAPIPELYVSYDSAQKLKMEAAELKSHDLSPRQICDLELLMNGGFSPLKGFLSEADYNNVVDNM
RLADGTLWPMPITLDVKEGFADTIELGQDIALRDQEGVILATMTVTDKWVPNKAHEAEKVFGADDQAHPA
VNYLHNVAGKVYLGGPVTGIQQPVHYDFRARRDTPNELRAYFRKVGWRRIVAFQTRNPLHRAHQELTFRA
AREAQANLLIHPVVGMTKPGDVDHFTRVRCYEAVLDKYPAATTSMSLLNLAMRMAGPREAVWHGLIRKNH
GCTHFIVGRDHAGPGKNSQGQDFYGPYDAQELFKKHQDEIGLEMVDFKHMVYVQEKAQYYPVSEVPEGDT
VLDISGTELRRRLREGLEIPEWFSFPEVVKELRRTSPPRSKQGFTVFFTGFSGSGKSTIANALMVKLMEM
GGRPVTLLDGDIVRKNLSSELGFSKEHRDLNIRRIGYVASEITKNGGIAICAPIAPYATTRRAVREEIEQ
FGAFVEVHVATTIEECERRDRKGLYKLAREGKIKEFTGISDPYDVPEAPELRVETENVEVDNCAHQVLLK
LENMGLIAG
>gi|56695803|ref|YP_166154.1| adenylate/guanylate cyclase [Ruegeria pomeroyi DSS-3]
MGTSALWRGSLATRLRIASGLILFAYAFFHFVNIGLGLISPAWMEAFQDARQVITRSLVGSILLYGALLI
HAGLALSGLARRRRLRMRASEAVQVVLGLLIPLQLIAHLTHTRYAHEVYGVNDEMSYLIILMWPNISIWQ
QSGLLLVVWIHGCIGLHFWLRLTSWWRAWVPWMIGLAVLVPAFALAGLLTEGRRMFAIFTNDAQRPGYME
AFNWPDAATFGALFQVKDLGLAVFWGLLALTAAIHLGRRLLRRRNAVRIRYVDGPEIVSERGLTLLQMSR
SHGVPHTALCGGKGRCTTCRVVIEAGADLLHPPSEVELRSLRAVGAPPNTRLACQIRPTDPATVFRVFRP
EGGRSRAHASQGQERQLAVLFLDMRGFTARTTGQLPYDVVFLLNRFFDAIVPSVIGAGGTVDKYLGDGFL
ALFEARDAQTSARAGIEAARSIGAALEVFNRTLAAEGTPPVRIGMGLHLGTLVLGEIGAAGHAPRTIIGD
TVNAASRLEAETKALGVELLISEAVLHAAGADLSALELGSFALRGVPQPVAALPVATAAKLSLDQTRGEP
SSSQP
>gi|56695804|ref|YP_166155.1| hypothetical protein SPO0902 [Ruegeria pomeroyi DSS-3]
MIDFSGTVWRILFADLAGAPTAPARAPEGRFHHSGQWALYASLTPEGAGVAIRRYVGPQDPPRVIVPLEV
TRAWLADLRGRPEVSQIWQDIRATGAAAPSWPYSDTARAEGAQGLLYSSRSRPELSHIVLFDPGPVRAGG
TAPLPWPGTDITTT
>gi|56695805|ref|YP_166156.1| thioredoxin-disulfide reductase [Ruegeria pomeroyi DSS-3]
MAETRHTKVLIIGSGPAGYTAGVYASRAMLEPILVQGIEPGGQLTTTTEVENWPGDTEVQGPDLMVRMEA
HAKAMGCEIIGDIITSLDTSARPFVAKGDSGTTYTADAVILATGARAKWLGMESEEKFKGFGVSACATCD
GFFYRGQEIVVIGGGNTAVEEALFLTNFASKVTLIHRRDELRAEKILQDRLFKNEKIVPLWFNQLEEVYG
TDAPLGVEGVKVRNVKTGEITDIPCKGVFVAIGHAPANELVKDVLELHNGGYVSVKPGTTETSIPGIFAA
GDLTDHKYRQAVTSAGMGCMAALDAERFLAEQE
>gi|56695806|ref|YP_166157.1| leucine-responsive regulatory protein, putative [Ruegeria pomeroyi DSS-3]
MVAHRLDEIDRKILAELQADGRMTNVELAKRVGISAPPCLRRVRALEDAGLIRGYHAEVNARQLGFEVQV
FAMVGLESQAEVELSAFEARCREWPLVRECHMLNGEVDFMLKCVAPDLSSFQSFLTGQLLTTPNVASVKT
SLVIRGAKDEPGVPFDVLEERLSRSA
>gi|56695807|ref|YP_166158.1| hypothetical protein SPO0905 [Ruegeria pomeroyi DSS-3]
MSIPHSLARAARNAVHTSPLLQDPAALRGPQPRPQMRRYEVSTLLENGNVVQTRHIAPALPLFEDAFCAF
SRGSLIDTDCGPMAIEDLLPGDRVITQDGSAQEVVWKGSTVIVPGRVSATGRDYRLTRIMADAFGMQRPM
SGVIAGPSARLLATPGHLRALAGDQPMLTPVQHFVDGMGIIETAPPTPIEVFHICLRRHAVINVDGLQFE
TYHPGVQAVRVLSQAIRSLYLNLFHHIDQLTDFGPQAFARAGEGEIDAIPA
>gi|56695808|ref|YP_166159.1| hypothetical protein SPO0906 [Ruegeria pomeroyi DSS-3]
MTLEILTADSLSFVRHGFFTRRGGASSGVFAGLNCGSGSSDQTDVVILNRARVAQAMEVEREALVGVHQV
HSPDVVTVTGPLNDKPRADALVTATPGLALSVLTADCQPVLFADPEAGVIGAAHAGWRGARDGVLEATLD
AMEALGASRADITAVIGPTISQRAYEVGPEFLDDFLAEDMDNSRFFANGTGDRMLFDLPAYGLHRLRAAG
CGQAEWTRHCTYSDADRFYSYRRATHAREADYGRLISAIRL
>gi|56695809|ref|YP_166160.1| hypothetical protein SPO0907 [Ruegeria pomeroyi DSS-3]
MSLTGLLLERIAQQGPLSLADYMAECLLHPEYGYYTTRDPLGVAGDFTTAPEISQMFGELIGLALAQAWM
DQGRPAPFTLVELGPGRGTLMADALRATRAVPGFHEAARLWLVEASPVLRATQAQALAGHDPQWCDTVSD
LPAGPLFGVANEFFDALPVRQFQRAGAVWRERLVGARDGALCWGLGAEALQPALAHRLEDTREGDLVELC
PAAGLILSELASRIAADGGAALIVDYGDWRSLGDTVQALRNHAPADPLADPGQADLTAHVDFEVLAMTAR
AAGCAHSRLSTQGVFLERLGIAQRAQALARHADEAALDRLITAHRRLTHPEEMGNLFKVLGLYPSDATPP
PGLEP
>gi|56695810|ref|YP_166161.1| prolipoprotein diacylglyceryl transferase [Ruegeria pomeroyi DSS-3]
MQAVLNFPDLSPELFSISLFGMEFALRWYALAYIAGIVIAWRLAVLATRRAALWPANTPPMAPARIEDLL
TWIILGVILGGRLGFVLFYQPAYYLANPTEILMVWQGGMAFHGGLLGVVIAAWLYSLRHNIPKLSLADLI
THTVAPGLLLGRLANFINAELWGRPSDLPWAVIFPGPAAQACPGVVGLCARHPSQLYEAALEGLLLGTLL
LWLVWRRGALKRPGLITGVFLAGYGLSRFVVEFFRQPDAQFVTPGNPLGLAWQVGEYGLTMGQLLSLPMI
ALGLWFVLRARAVPA
>gi|56695811|ref|YP_166162.1| hypothetical protein SPO0909 [Ruegeria pomeroyi DSS-3]
MQTRNKILDDISQLMTNAMGVAQGARDEAETAMKSLIDRWLADRDFVTREEFDAVRAMAQKAREENEALA
ARIAALEARLKD
>gi|56695812|ref|YP_166163.1| hypothetical protein SPO0910 [Ruegeria pomeroyi DSS-3]
MALSEQFLEEDIHPIDIVEHLAEHHDWDFDRIGDDQIAMAVEGQWRTYSLTLAWSGYDETLRLICTFEME
PPAEKLPLLYELINAMNDQCWAGTFTYWAAQNLMVYRYGLVLAGGQVASAEQIDTMIGAAVLSAERYYPA
IQLMVWGNRSPADAMQVAIAEAYGRA
>gi|56695813|ref|YP_166164.1| pyrroline-5-carboxylate reductase [Ruegeria pomeroyi DSS-3]
MTGEGHIVDMSDIARRGLVLLGCGKMGSAMLAGWLDGGLPAGSVWVIDPYPSDWVKAQGVHVNAELPGDP
AIALIAVKPQMMGDALPQMQALGNGTTLFVSVAAGTSIATYEQILGADTPIVRAMPNTPAAIGRGITALI
GNARASAADLDLAEALLKAVGQTVRLEREEQMDAVTGVSGSGPAYVFHLIETLAAAGTAQGLPADLAMQL
AKATVAGAGALAEAAEEDPAQLRVNVTSPNGTTQAALEVLMEPETGFPGLLNRAVAAATNRSRELSRG
>gi|56695814|ref|YP_166165.1| chaperonin csaA [Ruegeria pomeroyi DSS-3]
MAEISFDDFLKVDIRVGEVIRAEAFPEARKPAIKMWIDFGPEIGERKTSAQITAHYDPATLVGKQVMAVV
NFPPRQIGKFMSEVLVLGLPDDNGEIVLIGPDGKVPLGGRMH
>gi|56695815|ref|YP_166166.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein [Ruegeria pomeroyi DSS-3]
MKLLIARPMTAAVEARARAEFETEIRTSTTPLSEAEMLRALREFDIVMPTLGDMFSADVFAQVPEPRCRL
LANFGVGYNHIAVAAARAAGVAVTNTPGAVTDATADIAMTLLLMTARRAGEGERLVRSGAWEGWHPTQML
GHHVTGKHVGIVGLGRIGQAIARRCHFGFGMQVSYVARSDKDVDFPVSRMESLAALAGAVDFLVIAVPGG
GETRHLIDAQILAAMKPSGILVNIARGEVVDEAALIAALSERQIAGAGLDVYEFEPKVPEALRAMEQVTL
LPHLGTATEEVRSSMGHMALDNVAAFAAGRDLPNPVS
>gi|56695816|ref|YP_166167.1| thymidine kinase [Ruegeria pomeroyi DSS-3]
MAKLYFNYSTMNAGKSTVLLQASHNYRERGMQTYLMTAAIDGRAGTGRIASRIGIGAEADIFTPRDDVFA
MIRDRLGAGPVACVFVDEAQFLSPEQVWQLARVVDDLDVPVLAYGLRVDFQGKLFPGSATLLALADEMRE
VRTICKCGRKATMVIRQDASGRAITEGAQVQIGGNETYVSLCRKHWREATGDPGAKGH
>gi|56695817|ref|YP_166168.1| hypothetical protein SPO0915 [Ruegeria pomeroyi DSS-3]
MTFDLERIHGKNSIRFPDKNNGAENAVQERVNMADIGAYLKKHTEALVKDVGIEAACALTGKSKATLGRY
YSDNAEHADRFIPVDAVARLEGASSYPHVTSALAELKNITLSYDGRNSDTETRTGGVNADVIALSQRFAM
LMTEYQTAIEDGIITVNEAKRLLKETVQLQQVLIDMKLHLEEESTS
>gi|56695818|ref|YP_166169.1| hypothetical protein SPO0916 [Ruegeria pomeroyi DSS-3]
MAGSLRALAFLQTLPPDRRQPNLFFAALRLVGGLPEAGVAFDDVLTREGDAIAAVMRARRTQTNEPGRCA
CLLPLLAQLDGPLALIEVGASAGLCLLPDLYGYDWGRARLDPPGGTGAPMFPCRVNVRAPLPEHHPEIVW
RAGLDLSPPDLGDAADVAWLEALVWPEQTDRLAGLRQATSIARQAPPPVMAGDLTRDLEALIAQAPADAR
LVVMHSAVLTYVSDPGARADFARLMRSRDLHWISNEAPGVFPDHAEGLTPREDMFLMALDGRPVAWTGPH
GQSLDWL
>gi|56695819|ref|YP_166170.1| glyoxalase family protein [Ruegeria pomeroyi DSS-3]
MNYTMAGMILFTHNYQDCVDFYGSTLELEVLHRIDRPGETLTTFLLGDAYLMVESGGVASDKPKTLEQSP
VKLRFNVRDVRAAADQLLEKGVPVKVTEHIWGTTAEFVDPDGNRCALRSDKGFGE
>gi|56695820|ref|YP_166171.1| 3-oxoacyl-(acyl carrier protein) synthase III [Ruegeria pomeroyi DSS-3]
MFRPAITGTGVFTPPNVITNAELVTAFNAYADRMNAENAEAIAAGEMEPMQHSSEEFIVKASGIENRYVM
DKTGVLDPAVMHPLLRQRGDDEPGIMTEMAVYAAKKALEQAGKTAADVDAVICAASNLERAYPAVAIEIQ
QALGIEGFAFDMNVACSSATFGIQAAADMIRSGSIRSALVVNPEICSAHLEWRDRDCHFIFGDVATATLI
ERIEDAKGPHFEILSTRCATQFSNNIRNNNGFLRRSRPDGMADRRDMQFMQNGRKVFKEVLPMVSQHIAD
HMAAEGVANTHLKRLWLHQANKTMNDFIGKKVLGREPEPGEQPNILQDYANTSSAGSIIAFSQNSADLVE
GDLGLICSFGAGYSVGSVILRRHTS
>gi|56695821|ref|YP_166172.1| MarR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MTDHDSSPPKSYPPEIEAMMGVYALYWKLEEVIASEVAETCLSRPEVHMLIKLDAPMRMGVLARDMLALP
STITATADSLERAGYLTRSRDPDDRRAWLLELTPEGRALRAEFVADAGALFHEVSGLDAAQTEEFARLAR
KIRLTILETGLSEGFKT
>gi|56695822|ref|YP_166173.1| RND family efflux transporter MFP subunit [Ruegeria pomeroyi DSS-3]
MPRPPLAADTLAKPVKLMVVSETAPGFSRQFFGQVAARRTVDLAFQVAGQIVQFPVNEGVLLPKGSLIAQ
LDLEPFELQLDRARLQKEQADRTVARLSRLKGTTVSQVSLDDAETSAQLAAIALRDAEYALEHATLTAPF
DALISRRNVAAFTTVAAGTPVARIHDMSELRIEVDVPEILFQRAGEPEDVTITATFPASDRVFPLQIREF
DAETSSVGQTFRINFGFTPPPDLNVFPGSSVTVNVRVRDGEPGIAVPPSAIIPDAGGGPGVMIFEPTGAD
TGTVRRQAVEIAPLPNGSVRVLSGLGEGNEIVSVGGASLKDGQAVRRFTGFGN
>gi|56695823|ref|YP_166174.1| AcrB/AcrD/AcrF family transporter [Ruegeria pomeroyi DSS-3]
MNIARLSIEKPLYTWLIILISLVGGIWGFATLGRLEDPAFTIKQAVIATQYPGATAEQVALEVSEPLESA
IQKMDEVDIITSVNQPGQSLIEVEIKSTYDGGELPAIWTKLRARVGDAARTLPDGVSAPFVNDSFGDVYG
LFYAVTAPGYSDAEQHELATWLRRELLAVPGVAGVEVAGLPDEAIFVEPDLALSVNQNVPVQAIANAIAT
ADSVRDAGTLRNGDGKTAILRPEGSDSVDAIAGLSVGTQGKVINLFDMAQVHRGRQADPDLIIRHNGGEA
FSLGIAGLATENIVEVGQRVDAHLAELDGDIPAGVTLEPIYQQHVVVEEASNAFLVNLAMSVAIVVAVLA
LFMGWRAAVVVGATLLLTVVGTLLFMALFSIEMERISLGALIIAMGMLVDNAIVVAEGMQIAMLRGKPSR
AAADEAAGKTQIPLLGATVIGIMAFAGIGLSPDATGEFLFSLFAVIGISLLLSWVLALTVTPLLGHYFFK
QGHADAADAYGGPLFRAYAATLRAALRLRWLVVVGLVAVTAACFAGFGLMKQQFFPNSNTPLFFVHYKLP
QGTPIETTAGDLARVEAWLNKRSDVLAYTTFAGQGATRFMLTYAAEKPNPSYGHMIVRTASIEDIPALQA
DLEAFGTATFPEGEFRTRRLVFGPGGGDPIQVRFSGPDPAVLRQLADTAMGEMRAASDNITGVRSNWYEQ
ELALRPVYATERAQIAGVSRDDIADMLRFSTDGITSGVLRERDRLIPIIVRRPADGPYSIVDQVVYSPLS
ETFVPVEQMVDGFEYEAVNTLVHRRDRLLTVTVGADIPADLTAAQVHAEVRPVIEAIDLPPGYRMEWGGE
FEDSAKAQESLGKQLPLSLLIMVLISILLFNAIRQPVIIWLLVPMSVNGVVIGLLGTGLPFTFTALLGLL
SLSGMLIKNGIVLVEEIDLVRAEGKPLRAAIVEASVSRIRPVMLAAVTTILGMAPLLWDAFFVSMAVTIM
GGLAFATVLTLIAAPVFYDLFFSREARAGA
>gi|56695824|ref|YP_166175.1| hypothetical protein SPO0922 [Ruegeria pomeroyi DSS-3]
MNIYTTFGTNDLTRAVRFYDAVFAVLDQPRLPDWPEGWAGWGQDYDNGTGFWVCAPFDGSPASTGNGTMV
GFPAKNAAQVRAFHAAGLAHGGTDAGGPGTRPYYGPDFYVAYLRDPDGNKISCFYYHYDPATDAGA
>gi|56695825|ref|YP_166176.1| carbamoyl phosphate synthase large subunit [Ruegeria pomeroyi DSS-3]
MPKRTDIQSIMIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPGLADATYIEPIT
PEVVAKIIEKERPDALLPTMGGQTGLNTSLALEEMGVLDKFGVEMIGAKRHAIEMAEDRKLFREAMDRIG
LENPKATIVSAPKNEKGKFDIRAGLAEAMDALEDIGLPAIIRPAFTLGGTGGGVAYNRDDYEHFCRSGLE
ASPVAQILIDESLLGWKEYEMEVVRDKADNAIIVCSIENVDPMGVHTGDSITVAPALTLTDKEYQIMRNG
SIAVLREIGVETGGSNVQWAVNPADGRMVVIEMNPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELDN
DITKVTPASFEPTIDYVVTKIPKFAFEKFPGSEPYLTTAMKSVGEAMSIGRTIHESMQKALASMESGLTG
FDEVTIPGLSVGLWDAVEGADDKAHVIKAISRQTPDRLRTIAQAMRHGLSDDEIFGVTKFDPWFLARIRE
IVEEERALRKTGLPTTEEGLRALKMLGFTDARLGQLTGRDEDNVRRARHNLGVTAVFKRIDTCAAEFEAQ
TPYMYSTYEAPMMGEVECEARPSDRKKVVILGGGPNRIGQGIEFDYCCCHACFALTDVGYETIMINCNPE
TVSTDYDTSDRLYFEPLTFEHVMEILRVEQQNGTLHGVIVQFGGQTPLKLANALEQAGIPILGTTPDAID
LAEDRERFQDLVNRLGLKQPRNGIASTDAQALAIAEDIGFPLVIRPSYVLGGRAMEIVRDMDQLRRYIAE
AVVVSGDSPVLLDSYLSGAVELDVDALCDGEAVHVAGIMQHIEEAGVHSGDSACSLPPYSLSAEIIEQIK
DQTNKLARALNVVGLMNVQFAIKANEQGVDEIYLIEVNPRASRTVPFVAKATDSAIASIAARVMAGEKLS
AFPMRPPYKEGEDTKIADQMTLADPNMPWFSVKEAVLPFARFPGVDTILGPEMRSTGEVMGWDRSFARAF
LKAQMGAGMVLPSEGRAFISIKDADKGAAMLEAAQVLVDQGFTLVATRGTQSWLEGHGVPCEIVNKVYEG
RPDVVDMLKDGQVHLVMNTTEGAQAVSDSKAIRSIALYDKIPYFTTAAGSNAAALAIKAQAEGDIEVRSL
QG
>gi|56695826|ref|YP_166177.1| aminodeoxychorismate synthase [Ruegeria pomeroyi DSS-3]
MQLRFDHGPCGAGTGFDRPVRLIRADTAAQVPAALADLDAARADGAWLAGYASYELGYALEPRLAGLMPE
GRRLPLLCFGVYDGPRVLPLPTPGGGIGDFAPRWDGARYGAAFDQVHSAIGAGEFYQANLTFPVDLRLHG
AAPALYAALAARQPVGHGVLVTQPGLPDILCRSPELFFRTDPEGRIETRPMKGTQPRSDDPVEDARRRDW
LACDAKNRAENLMIVDLLRNDISRVALPGSVHVPDLFKVETYATVHQMVSRVAARLRAGVTLSDILRALF
PCGSITGAPKIRAMEMLARLEPWPRDIYCGSIGWAAPDGASEFNVAIRTLLADGARATLNVGGGVVWDST
AGSEYEEALWKARFARQMIPAFA
>gi|56695827|ref|YP_166178.1| hypothetical protein SPO0925 [Ruegeria pomeroyi DSS-3]
MEGPLCPPDDPGFRLIETLGWHPDEGPRRAALHLARMARSAAALGMPLDQTEAQRLLDQITGPAPLRCRL
TLGTRGALSLETAPLAASPPHWRVAIHPERLDADDPWLRHKTTRRALYDRARAELPTGFDEWLFLNRAGE
VCEGTITNIFADLGDGLLTPPLASGLLPGILRAELLASGQAREACLTPQDLHEAHALYCGNALRGLIPAT
FAPDA
>gi|56695828|ref|YP_166179.1| aspartyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
MHAYRSHTCAALTAANVGETVRLSGWVHRVRDHGGVLFIDLRDHYGVTQVLCDGDSAAFAALEKVRSEWC
IRIDGTVKARDADLVNPKLPTGEIEVYVRELEVLGRAEELPLMVFGDQEYPEETRLRYRYLDLRREAMQA
NMTLRSDVVASMRRRMWDKGFREYQTPIITASSPEGARDFLVPSRLHPGRFYALPQAPQQFKQLIMVSGF
DKYFQIAPCFRDEDPRADRSPTDFYQLDLEMSFVTQQDVFDTIAPVLAGVFEEFGGGRKVDAPQDWPQIA
YADAAKWYGTDKPDLRNPIKMQDCSEHFRGSGFAIFAKLLEQEGTEIRAIPAPTGGSRKFCDRMNAFAQK
EGLPGMGYIFWRDQGEGLEAAGPLAKNIGPERTEAIRQQLGLGVGDAAFFLGGKPKSFEKVAGKARDVIG
AELGLTETDRFAFAWIVDFPIYERDEETGEIDFEHNPFSMPQGGMEALNGDPMAVRGYQYDLACNGYELV
SGAIRNHKPEIMLKAFELAGYGADEVKARFGALFNAFHYGAPPHGGCAAGIDRIVMLLADEANIREVMMF
PMNQRAEDLMMQAPSEPSSDQLMELGLRVILQD
>gi|56695829|ref|YP_166180.1| hypothetical protein SPO0927 [Ruegeria pomeroyi DSS-3]
MVQSGVMLPGRIPKTSTGQPPLRPAAMRLSSLWVPVVLAPNLAATVLAVSLPSLSRQ
>gi|56695830|ref|YP_166181.1| hypothetical protein SPO0928 [Ruegeria pomeroyi DSS-3]
MARSIDDAVFDPGGAVEAQLGWTLGPRYSVASYRSAAAILAQRAPGELAAILRILDAFTISRTEIRSPGG
NRMSATTRFADLAAAEGFHQEVRIEADLTVRLREGKGENAPEIDRILRADYIHNHLVDFWRGRVAFDYEW
NSKDQTYDRDLYAFRSFFEAGVIDVGVIVTRALPPEFFQSLGYCLDKDGNETASTVAAKFGASTTGTHKL
LSRIAAGRSGGCPVLVFGIRPGNITPD
>gi|56695831|ref|YP_166182.1| type II DNA modification methyltransferase, putative [Ruegeria pomeroyi DSS-3]
MSQSASQDLSDFLGDDRFATVMADPPWRFTNRTGKVAPEHKRLARYPTMTLEDICALPVADYLQDRAHCY
LWVPNALLPEGLQVLSAWGFEYKSNIVWHKVRKDGGSDGRGVGFYFRNVTELLLFGTKGKNARTLAPGRR
QVNMMQTRKREHSRKPDEQYELIESCSWGPYLEMFGRGVRDGWTVWGNQADADYKPSWKTYSYNSGVAAE
>gi|56695832|ref|YP_166183.1| hypothetical protein SPO0930 [Ruegeria pomeroyi DSS-3]
MAGMLPIAIVTAGVLIYALRWHQTPVPRRRQVGPR
>gi|56695833|ref|YP_166184.1| response regulator [Ruegeria pomeroyi DSS-3]
MDDSDPFAAPHRLPTVTRPLLGLTILVVEDSRFACEAMRLLCLRSGARIRRADCLKSARRHLQIYRPSVI
VVDMGLPDGSGADLIEELAHTAPRVGVILGTSGDDCAEERALEAGADGFLAKPVTSLATFQAEILSRLPA
DRQPTGPRILHDEHIRPDPIAYHDDMAHVADVLSEKTDPQTLDYVAQFLLGVARSAEDHVLASAAQALAR
TRASGAPVTSDTARIAGLVQERLNHRKAI
>gi|56695834|ref|YP_166185.1| methylmalonyl-CoA epimerase [Ruegeria pomeroyi DSS-3]
MIMIGRLNHVAIAVPDLEAASAQYRSALGAKVGAPQDEPDHGVTVVFIELPNTKIELLYPLGENSPIQGF
LDKNPSGGIHHVCYEVEDIIAARDHLKSTGARVLGTGEPKIGAHGKPVLFLHPKDFNGCLVELEQV
>gi|56695835|ref|YP_166186.1| hypothetical protein SPO0933 [Ruegeria pomeroyi DSS-3]
MSITSALVLFSVIWFMTFLIVLPIRVRTQGDLGDIVPGTHASAPEHHHLKAKAWITTGVSVVLWAIIGGI
ILSGWISVDDIDLLNLRPPQE
>gi|56695836|ref|YP_166187.1| hypothetical protein SPO0934 [Ruegeria pomeroyi DSS-3]
MIIINAFLAALGQIGDPRFRKVLGLGVGLTLALLVAVYALFLWLIQTLVGPEVTLPVLGEVTWVGGLLSV
SSLIFMLVLSVFLMVPVASAITSMFLDEVAQAVEDRHYPHLPAVAKVPFGEALKDTVNFLGVLIAANLAA
FVLYAMFAPFALFIFWGLNGFLLGREYFTLAAMRRVGRAEARRLRSKHLMTIWAAGALMAIPLSVPLVNL
LIPILGAATFTHIFHAVNGIR
>gi|56695837|ref|YP_166188.1| nitroreductase family protein [Ruegeria pomeroyi DSS-3]
MPPRNDAALEFLQTRRSRPAKTLSAPAPSREELLPILTAAARSPDHGKLEPWRFVVLEQGAMARLADLAE
ARGRALGKPDEDIAKGRAQFDQGILAVAVIEVQKDSPKIPAIEQTYSAGAVCLAMLNAALAAGWGANWLS
GWPSHDRIFCAEGLGLESHERIAGLIHIATETSAPPDRPRPDLEAITTWVTA
>gi|56695838|ref|YP_166189.1| hypothetical protein SPO0936 [Ruegeria pomeroyi DSS-3]
MMTPHAFLMAAFLALSACATSAPQPVAQYPGSLPPPKAQRDSDARASATAYYLGPRGEEWY
>gi|56695839|ref|YP_166190.1| hypothetical protein SPO0937 [Ruegeria pomeroyi DSS-3]
MAKPKVKSLPDLSHLARPGQEIALRVTPKAARDSVTLAGEGLRITVTAPPEDGKANEAVRKLLARAMGVA
PSRLTLRRGQTARDKTFVYLGG
>gi|56695840|ref|YP_166191.1| hypothetical protein SPO0938 [Ruegeria pomeroyi DSS-3]
MVGRHRHCGLMFTIEHEFDSTVITLVDEGEAPLQEDVVINSFAECVTVEQFDPRTETMQKITLSPEQLRD
LAAALDLPEGVYQLREVPG
>gi|56695841|ref|YP_166192.1| M48 family peptidase [Ruegeria pomeroyi DSS-3]
MRRFLTLTVALGFLSACEVSDPGPVAPLPKVPDSPPMSASAAQSAFASVSARVRPVAVRECQQRTQGANC
DFKIQIDPDPKAPVNAYQTVGKNGQPLIIFTRSMIATARNADELAFVMGHEAAHHIRGHLARQNASAIAG
AVILGGLVGLAGGGASTIDAATQIGASVGARTYSKEYELEADELGTVITHKAGYNPLVGAHFFSRIPDPG
DRFLGSHPPNAARIQTVQRTAGSLGLTQ
>gi|56695842|ref|YP_166193.1| hypothetical protein SPO0940 [Ruegeria pomeroyi DSS-3]
MTGLTRLGVVLTDRGSKYAVSGAPARSREEVDTVLAALKSDRAYAKATHNTWAALLPSGALKADDGESGA
AMVILRMMERAELADHVIVVTRWYGGKKLGGDRFRRVGDATRAYLDHLGLCA
>gi|56695843|ref|YP_166194.1| hypothetical protein SPO0941 [Ruegeria pomeroyi DSS-3]
MADRDTLRKHADLFDRMATTLGHDLEESALKGQVRIDEISDAVLACTGCSNPAHCSDWLATRDTALQAPQ
YCRNRALLERLHP
>gi|56695844|ref|YP_166195.1| hypothetical protein SPO0942 [Ruegeria pomeroyi DSS-3]
MAQIPLGDIERHFWLTRSVARTIGVSFTEALAEKRLTEEGYAELITRCRAAGCTERCQLWLACQQGRAEA
APEFCTNAEALDRLR
>gi|56695845|ref|YP_166196.1| hypothetical protein SPO0943 [Ruegeria pomeroyi DSS-3]
MSDSPEIVQKAPFAVEVTEGKSYFWCACGKSQKQPFCDGSHKGTAFAPVKYTAEADKKVFFCGCKHSGKQ
PLCDGSHSKL
>gi|56695846|ref|YP_166197.1| RNA modification protein [Ruegeria pomeroyi DSS-3]
MRAMSTNPPNLRPDLAPAARLGTAATRPGQPTIGMVSLGCPKALVDSERILTRLRAEGYGISPDYAGADA
VIVNTCGFLDSAKAESLDAIGEALKENGKVIVTGCLGAEPDYIREHHPRILAVTGPHQYEQVLDAVHGAV
PPDPDPFVDLLPASGVQLTPRHYSYLKISEGCNHKCKFCIIPDMRGKLASRPAHAVLREAEKLVDNGVKE
LLIISQDTSAYGLDRKYDTNLWKNREVRSHITDLARELGQLDAWVRLHYVYPYPHVRELIPLMADAGCNL
LPYLDIPFQHAHPDTLKRMARPAAAARTLDEIAAWREICPEITLRSTFIVGYPGETEAEFQTLLDWMDEA
QLDRVGCFQYENVAGARSNDLPDHVPAEVKQERWDRFMAKAQAISEAKLAARVGQVIEVIVDEVDDEAAT
CRTKSDAPEIDGNLFIDEGFEGLQPGDIVTVEVDEAGEYDLWGRLR
>gi|56695847|ref|YP_166198.1| AsmA family protein [Ruegeria pomeroyi DSS-3]
MRWIVRIGITLVLAAVVMIGALLLLPGDRLARLAIEQIRKQTGREVTVAGEVKLSFWPVLGVETGPVTVA
NADWASAAPMLQAQGLAIGVAAPALLGGEVRITRILAQDPVLRLETAKGRVNWEFSPTGASGGAATPSGG
GSGGQLVTLDGLDLRNARLIYVEEGKTSFDFGGVDLSASWPATDAPLKMEARLEPGAGPISVDLDLADLS
AFSNGQVSAMQMKMTAPKTSITFDGRASIDGALAGAAVLDTSDSAAMLAAFGQAGISLPRGLGQRADLRA
QITYTADGRLALRELAADLDGNRLNGAADVTVADPPQVTARLTAGALDLTGLAAAGGTGSGRSDAASGWS
EDAIDASALALANGMLHLSAGSIALPGLELGQSVLSLSLDNSRAVVDMAPVSLFSGQLTGQVVANNRNGL
SVGGDLRAEGIEMREALATLGGIERLSGAASGQLKFLGVGASEAQIMRSLSGEGRLAMGRGVIAGFDLDN
LMGRGAKGGGTTVFNSLTASYRMDKGNLFNEDLLMLLDNFKANGTGRVGLGARDIDYLFTPVALRANAGQ
GLSVPVRIVGPWADPSIRPDLSQVIEAATGLDKEAVDTKAKDELRRKLGEELDTEITPDQNVEELIKDRL
EKEATKGLLKLLGAD
>gi|56695848|ref|YP_166199.1| phosphomannomutase/phosphoglucomutase [Ruegeria pomeroyi DSS-3]
MIRPTGFREYDARWKYPEEINLPGMTALGLGLGTQMHRRGIAPVIAVGNDYRDYSLAIKNALILGLMQAG
IQVKDIGPALSPMAYFSQFHLDVPAVAMVTASHNPNGWTGVKMGFDRPLTHGPDEMAELRDIVLNGEGVA
RPGGSYEFVDGVKEAYIDDLVGDFRMSRPLKVVCATGNGTASAFAPEIFARMGVEIVPSHNELDYTFPNY
NPNPEAMEMLHDMADTVKASGADFALGFDGDGDRCGVVDDEGEEIFADKVGVIMARDLSKLYPGSTFVAD
VKSTGLFAADPELQKHGAKADYWKTGHSHMKRRVKEIGALAGFEKSGHYFLAEPIGRGYDCGMRVAVEIC
KLMDRNPEMSMSDLRKALPRTWSTPTMSPYAADTEKYAILERLVEKLVAKHAAGDSFAGRAIKEVVTVNG
ARVILDNGSWGLVRASSNTPNLVVVCESSESEAEMRAIFAEIDEVIRTEPGVGDYDQTI
>gi|56695849|ref|YP_166200.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Ruegeria pomeroyi DSS-3]
MKHVQIADLTVGNDLPLTIIAGPCQLESADHAQMIAGTLKEACDAAGAQYVFKASYDKANRTSLGGKRGM
GIDAGLKVLDDIRRTMGVPVLTDVHSEAQCAIAAEAVDVLQIPAFLCRQTDMLLAAGNTGAVINVKKGQF
LAPWEMGNIVDKIASTGNENILLTERGVSFGYNTLVADMRALPIMAQTGYPVVMDATHSVQQPGGRGGSS
GGQREFAPVMARAAVAVGTAAVFMETHQDPDNAPCDGPNMIYLDEMPGLIDTLMRFDALAKANPIQI
>gi|56695850|ref|YP_166201.1| capsule polysaccharide exporter [Ruegeria pomeroyi DSS-3]
MLPSTELSPTQRREMEIGRIQQDIMRRRRRKMMQLLTRLAFFVFLPTLIAGYYFYVVATPMYASKSEFVI
LQADGSLGGVGGFFAGTQFATSQDSISVQSFLESKEAMLLLDRDQNFKAHFQQAEIDPIQRLAPDATNEE
AYKVYSRIVTIGYDPTEGVIRMEVAAPDPQVATDFSNSLLSYAESRVNNLSGQKREDQMREARKSFEDAQ
KERRKAQEALVELQQQGALLDPESVIASLRGRIDQVEVQLQEKELQLAALLDNPRPSKAKVDGARADIAR
LNDVLDDLNARMLDTSSGENSLARLSVRIQMAQADLASRDMMLQGALQQMETTRMEANRQVRYLTISVNP
VPSDEPSYPRSFENTILAFLLFAGIYLMISLTASILREQVSS
>gi|56695851|ref|YP_166202.1| capsular polysaccharide export ATP-binding protein [Ruegeria pomeroyi DSS-3]
MWPDRHAKHLTLGRSRQQMLEFENVSKSFWTGTQRKVILDRVSFRVELGKSMGILAPNGTGKSTLINMMA
GLEKPDEGVIRRGCNISFPLGFMGGVVGRLSAMENSRYIARLYGMDPDYIEAYCRWLCGLGEYFDQPLGT
YSSGMRARFSFALMLALDFDMYLIDEGMPASTDVEFNKKAGAILEERLRTTTIVIVSHQPATLEQFARQA
AVLMDGQLHVFDTLEEAKQLYDYQTQG
>gi|56695852|ref|YP_166203.1| uracil-DNA glycosylase, putative [Ruegeria pomeroyi DSS-3]
MTDPADRPLIERIRACRLCADRFAATHTAHEPRPVVWFRPGARLLIAGQAPGARVHASGRPFTDPSGDRL
RDWLGIGEETFYDRSRVAVVPMAFCFPGYNSQGADLPPPPVCGKTWHNQVMGELGEMPLSVLVGGHALKY
HLGARSPVTETVAAWRDHAPRVFALPHPSWRNTGWLRKNPWFEAELLPVLRARVKEVLNEPDRSANPD
>gi|56695853|ref|YP_166204.1| hypothetical protein SPO0951 [Ruegeria pomeroyi DSS-3]
MSQTGAQTPIDRAHAEMETSDTARLRFFERLGDAELFLLLTEEARGENLSPELFDLADGRFVLAFDREER
LAAFAGRPAPYAALSGRVLAAMLAGQGIGLGLNLDVAPSAMLIPAEALAWLAETLGHGPDQVEARITEVT
APGGLPEALLSALDAKLVTAAGLAQGAYLAGVVYQDGGRGHLLGFVEAREGAEPALAKAASEALTFSGIE
AGAMDVGFFTAADPMAATLSRVGLRFDLPEPPEPPRGPAAPGMDPDAPPRLK
>gi|56695854|ref|YP_166205.1| hypothetical protein SPO0952 [Ruegeria pomeroyi DSS-3]
MRDHDRAVIGPQRLGQQGAVGLVLQAQLPDLERHLVRPRRRDVDAIARRGLLADRQAVRRGRGMRERGRE
LRADPEQRLVDAAAADAHGQAQCLGETVGLGIGAGIARGHRDRAVIGVAGVQLSGADLLPEIAGADRHIG
GAYTDGGDPQPLLAAVRNHDGVLALHHLGGIQHKGLVMPVLVGDELVGYHLLPVDRNADVALAAGGVGVR
HPGAGDGQSDIGRLGQLQREIGAAARLQVPEPGRGREPAVERHAEQRGTRGVGGVEGDGLRRHQLRTGIL
EQRRRGRALGKDAIAARAGGRGRHGPAKDRIREIRARIEQHAGKVLRHRHVHMVSPETLDQRRIVAPCHR
DDRIGPAAQRRAARDFRLFRNEKTGPQQGAVRSCDLAHSGPSPGWVEGAKGPDSVWHFPKMPRIFGRPLA
QLGFDSSLSWVRVSKSLASWRSRSWYFGSPETRLTMRPRLTPGRASSSRAQRITWV
>gi|56695855|ref|YP_166206.1| putative glutathione S-transferase YghU [Ruegeria pomeroyi DSS-3]
MTEHTPYTPPRVWTWDKENGGQFANINRPIAGATHDKELPVGKHPFQLYSLGTPNGVKVTVMFEELLAAG
HAGAEYDAWLINIGEGDQFGSGFVDVNPNSKIPALLDRSGPEPVRVFESASILFHLAEKFGAFLPASGPA
RTEVMNWLFWQMGSAPYLGGGFGHFYAYAPEKFEYPINRFAMEVKRQLDVLDRQLAQHPFIAGEEYSIAD
MAIWPWYGQLVLGRAYDAAEFLDAESYTHVMRWARELDARPGVSRGRMVNRVSGEPKYQLRERHDASDFD
TRTQDKLESNPS
>gi|56695856|ref|YP_166207.1| hypothetical protein SPO0954 [Ruegeria pomeroyi DSS-3]
MKRLVLALAAAVMTALAAPVLAGPQYLDGTGFAVSGYDVVAYRGLAQAPVGQAQPEAVKGRADITAEWNG
STWAFASADNRDKFLANPAYYAPQYDGHCAYGVSKGGKVPGNPNLWRIVDDKLYLNITKNVVGFWEEDIP
GNINKAQGNWPGIETKAASTSVIPDFTSAAPVKN
>gi|56695857|ref|YP_166208.1| amidohydrolase domain-containing protein [Ruegeria pomeroyi DSS-3]
MFPTDRRSVLRVLLWGSAAFLPSHSARALTNSLSDLGGTMVQNADAVIYTAREVVTLDPARPTAQAVAVL
GDRIHAAGTLSEVTAALDGHPYRVDDRYSGHVIVPGFIAQHDHPILAALTMASVILSIEDWVLPGGTVPA
VRDKADFIARLTEAVSAAPTADEPILTWGYHPSFYGRLTRSDLDAISTQQPILAWARSCHEMVLNSAALA
RGGVTADTVAGFSDTAQEQSNFDEGRFWEQGFFAVLPNIGSMVASPERLRAGLELSRDYMRAKGITIGNE
PGGILSKQVQDGVNAVFGAADMPFRWSFMADGKSLIAAQPDDARVIADTEALAGWYGGMTSLAPKQIKLF
ADGAIYSQLMQVRDPFLDGHKGEWMMDLDQFQRAFRVYWDAGYQLHVHVNGDAGLDRVLDTLETNLRRTP
RDDHRTTIVHFAVSGADQVLRIRDLGAIVSANPYYVAALADNYGEVGLGPDRADNMVRLGDVEAAGISWS
LHSDMPMAPCDPLFLMWCAVNRVTSSGRVAGPAQRVSAETALRGVTINAAYSLKLEHEIGSIEPGKRANL
TILGDNPLTVDPEKIRDIAVIGTVMEGRDFPAQSDRRKASLDMPRNPEASQEFAVAALDHAMRVAHGHEG
N
>gi|56695858|ref|YP_166209.1| hypothetical protein SPO0956 [Ruegeria pomeroyi DSS-3]
MSWTDERVELLKKMWGEGQSASQIAKELGGVTRNAVIGKVHRLGLSNRSSGAAPASTKAETKEKPAAATP
RAEAKPKPAPRPEPLRAAPDPAPAPQPAEIKPIPARKQIIPAGQPLPPQPSANEISPEALAKVNEVEKKA
KKLSLMELTERTCKWPVGDPATEDFWFCGLPVQQGKPYCEAHVGVAFQPMSSRRDRRR
>gi|56695859|ref|YP_166210.1| ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MELGMRRFGRVNWLGLYTLAAREVMRFLVVWTQTLLAPLVTAGLFMMIFSLAVGSGRGAVMGVPFLTFLA
PGILMMTVIQNAFANTSSSVVISKVQGNIVDTLMPPLSALELLLGYLAGAVVRGLLVAVAIAAALVLVLG
IVPAHPLLALGFVVLGAGFMGALGLVAGIYANKFDQMAAITNFIVTPLAFLSGTFYSVEALPPLLERLTH
ANPVFYLIDGLRFAVIGVSDSPPALGLTVCLGATGAVCLLAWVLLKRGYRLKA
>gi|56695860|ref|YP_166211.1| hypothetical protein SPO0958 [Ruegeria pomeroyi DSS-3]
MHERRIPEWVRHSPAPSVRDFGLLAGLEAVVRGILISVFPLIMYRALGDAERVSMAYFLIGFLSLGAGLM
VPGLIRYLPRRWAYSAGALLFVAGAGLAVQGTPLTTIAALACNTVAAVVCFICFNAYVLDYIERVELGRC
ETSRMFYSALGWTVGPMAGVLLMEIWPPAPFVISGVAALAMLALFWALRLGNGKMITRARRPARNPLAFL
PRFFAQPRLVAGYLFAMIRSCGWWVYVVYLPIFAIESGLGDQLGGIMLSITNGMLFAAPLILRWVQARSL
KSAVRTGFAGAGLCFATAGLLSGWPPLAAGLLMLGSFWLIVLDICAGLPFLMAVKPSERTEMSAIYSSYR
DVSGILTPGVAWLVLLAAPVAGIFVAGGAGLFGAFTIAARMHPRLGRPRIRLEPGSLADA
>gi|56695861|ref|YP_166212.1| hypothetical protein SPO0959 [Ruegeria pomeroyi DSS-3]
MSRASVTIGARRNGAIKAAAHARIRPVANSSCLAISRQMQHRYTMFEPKPQNPALAAALIFAATAFIAGT
TLLAKALGTGALGPALPALQISHGRFLFALAVILSIVAATRPRLSRPHWGLHLGRTSFGWAGVTLMFAAV
AYIPMADATAIAFLNPVFGMLLAIPLLGERVGPWRWGAAVIALVGALILLRPTPGSFQPAALLALAAAAV
MGMELIFIKKLAGRERPIQILLVNNAMGLAIASLAVWPVWQAPLPAQWAALAGIGLLMACAQICFVNGMA
RADASFVAPFSYGTLVFAALYDLAVFQVWPDAISLGGAAIILTGALTLAWREGRVRRP
>gi|56695862|ref|YP_166213.1| MerR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MRIGELARRSGLSRDTLRFYERQGLIQSEPGAEATNSYRDYPEEALITLDQIADAQAAGMSIADLAMLMG
QLQAADPDGFDGEAFLDARIVEVEARITRAERFLDSLRQARAALAATPRLR
>gi|56695863|ref|YP_166214.1| hypothetical protein SPO0961 [Ruegeria pomeroyi DSS-3]
MGQTCQSCGMPLSKDPAGGGSEADGARSTKWCSLCYENGAFRHPDATYEEFQAHCVEALVGQGMPRILAW
AFTRGMKRLDRWRAA
>gi|56695864|ref|YP_166215.1| acetylornithine transaminase protein [Ruegeria pomeroyi DSS-3]
MIPSVLPTYTRAPLHFVKGEGAWLTEADGRRFLDLGAGIAVNALGHAHPALVKALTDQAQNLWHVSNLYH
IPQQQALADKLVEHTFADTVFFTNSGTEACELAVKMARKYFYDKGQPERVEIITFDGSFHGRSSAGIAAA
GSEKMVKGFGPLLPGFVHLTFGDLDGVTNAITDKTAAILIEPVQGEGGIRPVPDADLKALRQICDDHGLL
LILDEVQCGVGRTGRLFAHEWAGITPDIMMVAKGIGGGFPLGAVLATEEAASGMTVGTHGSTYGGNPLGC
AVGCAVMDHVADPDFLAEVNRKAALLRQRLEGLIATHPNVFEEVRGSGLMLGLKCKASNLDVVKAGFDNL
VITVPAADNVVRLLPPLTLTEEDIAEAFTRLDAAATQVDAA
>gi|56695865|ref|YP_166216.1| ornithine carbamoyltransferase [Ruegeria pomeroyi DSS-3]
MNHFLDIHKTDAADLRAMIDQAGAMKQARLGRPKAAPDDEQPLKDRMVALIFEKPSTRTRVSFDVGVRQM
GGQTMVLSGNDMQLGHGETIADTARVLSRYVDMIMIRTFDESVLAEMAEYADVPVINGLTDRSHPCQIMA
DVLTYEEHRGPIAGKKVVWTGDGNNVCSSFLHAAGQFGFDLTFSGPAQFDPEEEYMGFARQKGSKIVIER
DAVKAVEGADLVVADTWVSMHDAQSAKERRHNLLRPYQVNAELMRHAKPDALFMHCLPAHREEEATSEVM
DGPHSVIFDEAENRLHAQKAIMRWCLGA
>gi|56695866|ref|YP_166217.1| N-acetyl-gamma-glutamyl-phosphate reductase [Ruegeria pomeroyi DSS-3]
MTYKVFIDGEAGTTGLQIRARLEGRDDIRLITLGDADRKDTRARLAAFDAADVGILCLPDAAAVEIVAQL
AGTGTRLIDASTAHRVDPGWVFGFAELDNDLRARIAGGQFVSNPGCYSTGAIALLHPLVKRGLIAADQAL
AINAISGYSGGGKAMIAEFESGKTDGPFVYATEQRHKHLPEIVAHAGLTRQPVFVPSVGPYEQGMIVQVP
LPFVEPGQGAAIEAALADHYATSRFVSVVSPDHYGARIDPRRLNGTNQLELSVHGNLDTGGAVLLALLDN
LGKGASGAAVQNLNIMLGLDEGLGL
>gi|56695867|ref|YP_166218.1| acetyltransferase [Ruegeria pomeroyi DSS-3]
MSAVDLLLTRLEGEYAITRRPSAAPLPGWQEGPGLISVTRAPDETSILCLSERVPEGETTARGWQALRVE
TLAALDQPGVVLAAVEPVSRSGLGVFVTSTHDRDYLLVRAGQAARAEAAWIAAGHNVCEGGVTLRRAGPQ
DAEALATLHFQVWQETYARIAPPEVRLALNKVRRTAYWRDRLASGDDTVIALRDGVAVGLAALSPSGVEE
FDGCTELDHLYIAASARRSGLGARLLGLARAQAALAGAPRLILAVVRDNAPARAFYQAQGGAVLAERQDK
GPLWRSDNLIFGWATA
>gi|56695868|ref|YP_166219.1| 2-dehydropantoate 2-reductase [Ruegeria pomeroyi DSS-3]
MRIVIAGAGSIGCFCGGLLALGGHDVTLLGRAPLLARIGAHGLRLSDYGGLDLHLGADRLTLATDPACLA
QAELVIVTVKTPATAEMASAIATHAPASAPVLSWQNGLENTRQLRARLPGRDIRAGMVPFNVVPLGEATW
HRASSGDIVIAAGPGGLGAALTVPGLPVAESLRIEAVQWGKLVINLNNALNALSGLTLVQQLADRSWRRL
MAAQMAEALAVLRAAEIPVAATTPLPAWTTPHILRLPNTLFTRIAARMLTVDPSARSSMAYDLEAGRMTE
IASLQGEIIRLGRAHDVATPICSRVAALIDAATHDGAGPPRLTVAQIAPPG
>gi|56695869|ref|YP_166220.1| phosphate transporter family protein [Ruegeria pomeroyi DSS-3]
MSDRKSKPQWGRLDADLNRISRMETATAYASRPLVGTGIALAFIVLAALAAMVALGGTPGGIVVVAAAAF
GAYMAINIGANDVANNMGPAVGANALSMGAAIAIAAVAESAGALLAGGDVVSTISKGIIDPQSVADTQVF
IWAMMAALISSALWVNLATWVGAPVSTTHSVVGGVMGAGIAAAGMSAVDWSTMSAIIASWVISPLLGGVI
AALFLALIKHRIQYAPDKIAAARRWVPILVAVMAGTFAIYLSVKGIKKIVKIDLQTALMIGLATALLVWA
VTIPWIRRKSEGMENRTKSIKALFGLPLVLSAALLSFAHGANDVANAVGPLAAIVHVSQAGSFAAKVAIP
FWVMVIGAFGISFGLFLFGPKLIRMVGSQITKLNPMRAYCVALSAAITVIVASWLGLPVSSTHIAVGGVF
GVGFYREWHSERRLRNGRNSRPPAQRLPLEERRRRKLVRRSHFMTIVAAWVITVPAAALMSGVIFSILNS
FV
>gi|56695870|ref|YP_166221.1| NUDIX family hydrolase [Ruegeria pomeroyi DSS-3]
MKSRVLNAWTELVRPMFLRPKRTQVAALCLRPATGGPEVLLITSLDTGRWIVPKGWPIEGLSGPETALQE
AWEEAGVRRARVEDEPVGVFGYGKRRKNGTVEPVETYVYRMLVDEISDSYPEAGRRKLRWVAPSEAANMV
QEPQLQDLLRQL
>gi|56695871|ref|YP_166222.1| aquaporin Z [Ruegeria pomeroyi DSS-3]
MTNKLIAEVFGTFWLVLGGCGSAVLAAGVADVGIGWAGVSLAFGLTVLTMAYAVGHISGGHFNPAVSLGL
MVAGRFDGKLLLPYWAAQVVGAILAALVLYIIVSGGAGFTGVGGFASNGYGEASPQGYSMMSGLVIEVVL
TAFFLIIILGATSKGAPAGFAPIAIGLGLTLIHLVSIPVTNTSVNPARSTGVALFADGPALAQLWLFWVA
PLIGGALGAVLWKVIAGKDAD
>gi|56695872|ref|YP_166223.1| GMC family oxidoreductase [Ruegeria pomeroyi DSS-3]
MTEQLAGDYDYIIVGGGTAGCVLANRLSADPKTRVLLLEAGGKGHYHWVHIPVGYLYCIGNPRVDWMMKT
AAEPGLNGRSLVYPRGKVLGGCTSINGMIYMRGQAADYDGWRQMGNTGWGWDDVLPYFRRSEDHHKGESD
LHGAGGEWKVTTQRLSWEILRAFQEGAREFGYEPTEDFNSGTNEGSGFFEVNQRNGVRWNTTKAFLRPAM
NRPNLRVLTRAETQRLILDGKRVTGVAFRHGGQDRTATARAEVLLAAGAINSPKLMELSGIGQPDRLSAL
GIAPVHDLPGVGENLQDHLQIRTAFKVSNTPTLNETANSLTGRIGIALKYALTRSGPLSMAPSQFGMFTK
SDPALETPDLEYHVQPLSTDRLGDPLHAFPAITVSVCNLRPESVGDCHITSAKTGPQPHIRLNYLSAPRD
QQVAVAAVKQARRIMTARALAPYAPQEFLPGPQIASDADLLREAGNIATTIFHPVGTCKMGNDPMAVVAP
DLRVHGLAGLRVVDASIMPKIVSGNTASPVIMIAEKAAEMIRAL
>gi|56695873|ref|YP_166224.1| ATP-dependent helicase HrpB [Ruegeria pomeroyi DSS-3]
MTRLPIDDALPDLISALRAQGRAVLQAPPGAGKTTRVPLALLSAGLTNGRIVMLEPRRLAARAAAERMAE
TLGEPVGQTVGYRIRGEAKRTNATRIEVVTEGILTRMLQAEPDLPGIGAVIFDEFHERSLNADLGLALCL
EVTEALRDDLILLAMSATLDAGPVAALMDAPMVTSQGRAYPVETRWLDHPLGPRARRVEALADLVAKAEA
ETRDLGGSLLVFLPGEGEIRRAQTLLSARLPDSCTLRPLFGAMPFAAQRAAIRPATEGRNVVLATSIAET
SLTIPDVRVVVDMGQARRARFDPGSGMTRLVTERVTRAEATQRAGRAGRVAEGICYRLWTRGEEGALAAF
PPAEIEAADLTGLALELALWGAEPGALGFVTQPPETALAEARALLGFLGAIDAQGRITDHGRVLAALPLH
PRLGHMLALAGREAAPLAALMAERDPLRGAPADLDLRLAALRDPSRFRRERPYEVNMGVLDRIRAEARRL
EKQAKTPAGRMSPAAMAALAYPDRIGQRRKGEAPRFVLSGGKGAALDPGEALANTPYLVAIDTDGDPREA
RIRMAARITEGELRELFADQITRNDLCEWSRRERRVIARHQERLGAITLSDRIWKEVPDEAVARAMLDGV
RDLGLRLSAPAARLARRVELVRASGADLPDFSEPGLMGTIEDWLQPMLQGVRSAEDWKRFDLLPALKARL
DWGQSQELETRAPGAFITPLGRKVPIDYEREVPEISVRLQEMFGVTQHPMVAGVPLKITLLSPAQRPIQI
TRDLPGFWDGSYADVRKDMRAQYPKHPWPEDPREADPTLRAKPRKG
>gi|56695874|ref|YP_166225.1| arginine/ornithine transport system ATPase [Ruegeria pomeroyi DSS-3]
MDITQLGDRILSGDRRALARAITLVESRRDDHRAQAASLLDHLAGAGRQALRIGLSGTPGVGKSTFIESF
GMMLIGQGLRVAVLAVDPSSARSGGSILGDKTRMERLSRERAAFIRPSPSQSHLGGVARRTREAVSLCEA
AGFDVVLIETVGVGQSETVVAELSDLFLLLLAPAGGDELQGVKRGIMEMADLILVNKADGELKSTATRTC
ADYAGALRLLRKRVQDPPGFPKALTVSAVEEQGLDAAWTEMRALSDWRRENGHWTANRAEQARYWFGQEV
RHALLAQLDTPQARAEMDRLSTAAAQGQLTPASAAEQMLAFLREG
>gi|56695875|ref|YP_166226.1| 50S ribosomal protein L28 [Ruegeria pomeroyi DSS-3]
MSRRCELTGKGPMTGNNVSHANNKTRRRFLPNLNDVTLQSETLGRGVKLRISAAALRSVDHRGGLDAFLA
KAKDEDLSDAALKVKKEIAKAQAAA
>gi|56695876|ref|YP_166227.1| hypothetical protein SPO0975 [Ruegeria pomeroyi DSS-3]
MEIGPLTDRRPAVAGGLLPLRSGYREQISGRRMMTPLRISLALALSLLVGLTGQGLANSRGMSAAVDQME
ICTGTGPVILYVDADGQPTAPPHYCPDFALMLLGALLPDAAVAPTPPQLALPAPDRTQPSLITRTLSAVP
ARAPPVLL
>gi|56695877|ref|YP_166228.1| hypothetical protein SPO0976 [Ruegeria pomeroyi DSS-3]
MSLKSRLLAAAATLTLAGAAWAGETIVIDDAYARSSGANAKAGAAFMMIQNTGAEDDRLIDARSEVAARV
ELHTHKINEQGVAKMMHVPEGFVIPAGGMHPLARGGDHVMFMGIKVPFAQGATVPVTLVFEKAGEIEVEI
PVDLERQDGGHGHMKKKSN
>gi|56695878|ref|YP_166229.1| ornithine cyclodeaminase/mu-crystallin family protein [Ruegeria pomeroyi DSS-3]
MGVRPAGPKGMSDFLILSDPDLDTLGITTDEIQTALEAAIRAQIRATVHVAPKSALLPGDGRYVMTTLAT
GNSPALTVVKSVMVSPDNPARGLPGTEGVLLVQDSETGQLRALMQAGWITRMRTAGLSALVARRLGDPAA
RVVAFIGAGAQARAHLAALCDLFPLQRAVILGRGAENIARLSAAARARGLQAEIADNPHQAIADADLVVS
SVTLDHQMTPFLDARWLKPGAFASLTDTGLPWQPDGMAALDPLYIDDLAQEAANPRPMIDPARVGGDLAA
LLGEDLHSTNVNRHDPSRRAGFLFRGPAIADFALAALALHRAQSLGAGRDTAWPDATRPGQSPA
>gi|56695879|ref|YP_166230.1| NAD-dependent deacetylase [Ruegeria pomeroyi DSS-3]
MRKIVILTGAGISAESGLGTFRDADGIWTKYPLEDVATPEGFARDPELVHTFYNARRVQAAAARPNAAHT
ALARLQRDWPGEVVIVTQNVDALHEAGGASDVIHMHGTLAGALCAICGHRWLAPETMDTTTPCPACARPA
ARPGVVWFGEMPYFMDAIYDHLASADLFAAIGTSGQVYPAAGFVQEATACGARTVELNLDPSAVVSNFDE
TRFGPASRIVPQWVCDLLDQRG
>gi|56695880|ref|YP_166231.1| low molecular weight phosphotyrosine protein phosphatase [Ruegeria pomeroyi DSS-3]
MTHRILFVCLGNICRSPAAEGVFRALMPEVGTDSAGTGGWHVGEPPYGPMRAAAAARGIDLSDLRARQFV
AGDFGRFDLILAMDAQNLADIEAQRPAGNGIPVRLFTDYAPESGATHVPDPYYTRDFDGALDLIEVAARG
LRQRLAEGALLPL
>gi|56695881|ref|YP_166232.1| LysR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MKGVTLRGLEVFEALSRTGSVAQASTLTGLSQPAVSQQLRNLEQALGTDLVDHGRRPMVLTPAGRAFLPR
AETVLSQLRLAQSELTVMDLTHLSTLSMGLIDDFDNDLTPRLATLLADSLTKCRFKLITAPSHEISEAMK
ARRLHIAVAATSGEVHDGIIEYPLVRDPFILVAPRGVVSKGGDMLASLQGLPLLRYAREQLIGRQIEAHL
ARQKLDFEERFEIGSHLALMAMVARRLGWAVTTPLGFMRAERFHDEVEAFALPFAAFSRRISLFAGADWA
DRVPRDVAETMRRLVQSQIIDPAVARLPWLGGELRVIES
>gi|56695882|ref|YP_166233.1| histidinol dehydrogenase [Ruegeria pomeroyi DSS-3]
MTITVLKSAPGLPPAPQGDAADVVQVMLARLRAEGEAAARDYAARLDGWSGEIVVSPDQVARASEQVPED
LKTQIRYAHDNIRRFAEAQRASALDFQTELRPGLIAGQKQIPLAAAGAYVPGGRYAHIASALMSIATARA
AGVGQITAVSPPQVGRGVHPAILYAMSLAGADRILALGGVQGVAALAFGLFGAPPADILVGPGNQFVAEA
KRQLFGPVGIDMFAGPTDSLVIADSTADPLTVAWDLVGQAEHGYNSPVWLVTDSAALAEAVLAHIPGCIA
DLPEPNRSSAQAAWDALGEVILCTDREEMAATADRYAPEHLHVQAADLDWWRGRLSAYGSLFLGELTTVA
FGDKASGPNHVLPTSGAARYTGGLSVHKFLKTVTWQQVAPQALPDLARATATISRAEGMEGHARTADIRL
EKLRPTLRQVGTG
>gi|56695883|ref|YP_166234.1| hypothetical protein SPO0982 [Ruegeria pomeroyi DSS-3]
MRTRAPPGKLTRDRVRGDMGDVNNEEELEEFLRALPHRARVGFAARAALRVAPYTFRYRDHVDENFDGSV
FLLACLRANLVSGVAGTWPTHDTREIVSAARSAASAARSALSAARSALSAAHPADSAALSARSARSALSA
ALSADSADSAALSARSALSAALSADSAARSAALSADSAARSALSAALSADSAALSADSAALSAAPDQSQQ
IFATPLWPAQVPEKVSEAVETFEEAAPGTPWAFWARWYRGMFDGKPLDWELQRQVALIDDAIWKAGPKAV
AQEIARIERLFELEHEIAALKATLPPRMALSSTSLIGDNGGPPLNDGVQQAVRGDFVLIWDQIEALEAEI
TKPEPSLGKLKKIAKALLDISVRIASYCGGKIDLALTEASKEAGKAVVKLGAPIAVASLAAQNEGIQQVA
KAIWAFVKTLPPG
>gi|56695884|ref|YP_166235.1| GTP-binding protein LepA [Ruegeria pomeroyi DSS-3]
MTDLAHIRNFSIVAHIDHGKSTLADRLIQETGTVQDRDMKEQLLDAMDIERERGITIKANTVRIDYTADD
GQAYVLNLIDTPGHVDFAYEVSRSMRAVEGSLLVVDSTQGVEAQTLANVYQAIDADHEIVPILNKIDLPA
SECDRVAEQIEDVIGIDASGAIRVSAKTGVGIHETLEAIVKHLPAPKGTRDAPLKAMLVDSWYDSYLGVI
VLVRIMDGVLKKGMRVKFMSNGTLHHVDRIGVFRPAMQMIDSLGPGEIGFLTASIKQVRDTRVGDTITND
RNGTEVALPGFKPAQPVVFCGLFPVDSAEFEDLRDAIEKLALNDASFSYEMETSAALGFGFRCGFLGLLH
LEVIRDRLEREYDIELITTAPSVVYHVFMKDGEMRELHNPADMPDLSKVDHIEEPRIKATILVPDEYLGD
VLKLCQDRRGIQQDLSYAGSRAMVVYDLPLNEVVFDFYDRLKSVTKGYASFDYQLTGYREDSLVKMSILV
NDEPVDALSTMVHRDRAEARGRAMCEKLKDLIPRHMFKIPIQAAIGGKVIARETLSALRKDVTAKCYGGD
ATRKRKLLDKQKAGKKKMRQFGKVDIPQEAFISALKMDS
>gi|56695885|ref|YP_166236.1| zinc ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MMLDDFMIRAALAGAGVALASGPLGCFVVWRRMAYFGEATAHAAVLGVALALALSAPILPAVVLAAVLMA
SAVTLMRGRGYAMDTALGVMAHTALAAGLVAVSLLADVRLDLMAFLFGDILAVSRGDLAVIWGGGALVLG
LTLWRWSDLLIATLNPDLAHAAGVDPRRAETWLTLALAVVVAVAIKVVGVLLIAALLVIPAAAARPLSGT
PEGMALGAAGIGGLSALAGLYGAYLFDTPAGPSIVCVAALSFIVTTLARGLVRGR
>gi|56695886|ref|YP_166237.1| zinc ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MNTPVIAAEGLSIRVDGRTVLADISVAVAAGEIVTIVGPNGSGKSTFLRALIGALPAASGRVIRAPGLRI
GYVPQKLAIDATLPITVSRFLSLPRRVPQDVAAEALARAGVPDLANRQMTDLSGGQFQRVLLARAVLERP
HLLLLDEATQGLDQPGSAAFYEQIEEVRQDLGCAVVMVSHDLHVVMAASDRVLCMNGHICCEGTPEVVAD
APEYRALFGTGTRGALALYRHQHSHRHDDDCGHDHGAEHMHPHGDR
>gi|56695887|ref|YP_166238.1| zinc uptake regulation protein [Ruegeria pomeroyi DSS-3]
MTAKGFERHDHSQCIATALHQAERHCAAHKLQFTPVRRRVLEILLDRHRAMGAYEILDILAADGLGSQPP
VAYRALDFLVQNGFAHRIERLNAYTACAHPEEDHVPAFLICRNCKAVAEAGTELEQGRLGKAAAEAGFTI
ERIVVEAEGLCPGCAGQAA
>gi|56695888|ref|YP_166239.1| zinc ABC transporter, periplasmic zinc-binding protein [Ruegeria pomeroyi DSS-3]
MPMTRLSLSALLLTCATPVLAEAPRVAVDIAPLHSLVAQVMAGVGEPDLIVRPGASPHSYALRPSEARAL
QQADLVIWVGDDLTPWLEKPLMALSDAGRQIALLDHPSTARLAYRDLAHDGHDDAHTQTGHDDHDHAQEA
HETHDDDHDHSGTDPHAWLDPGNASAWLSLLAEELAALDPGHADRYRANAAEAQARLAELTIQIATELQP
MQGKPFIAFHDAYQYFERPFGLTLAGTVSLGDASSPSPARLAHLREEVVEEGVSCAFSEPQYNTALLETA
VEGTGAAIFVLDPLGAGLEPGPALYPQMLRDMAASFAACAAQ
>gi|56695889|ref|YP_166240.1| YeeE/YedE family protein [Ruegeria pomeroyi DSS-3]
MLVWLSDSQAVALVGLVGGIALGLAARLGRFCTLGAIEDLLYGGSDVRMRMWVLAIGAAMAGSFGLMGLG
WLDPGQSYYLSIRWMPLASILGGLMFGYGMALAGNCGYGSIARLGGGDLRAFVIVLVMGVFTYVTLAGPL
APLRNLLFPQIEVAGDLPPGLAHHAHALTGLPVHVIGIGIGLILCLGALSSRDMRQEPKSIFWSLVVAAA
IVGGWAGSYWVYQHGFDGLQVVSHSFSAPVGESILYAMTGSVRPLSFAVGSVAGVWAGAFIGSLIKGHFR
WEACEDPRELRRQILGAAIMGTGAVIAMGCTVGQGLTAFSLLAISAPVTFLAIFAGAALGLRQLIEGFSA
AE
>gi|56695890|ref|YP_166241.1| transcriptional regulator SoxR [Ruegeria pomeroyi DSS-3]
MTLETQPGTAPGTRTRDMALPQFSTDMADDELDKMVDNATTASNFLKAISHEGRLMILCHLVSGEKSVTE
LEELLAARQAAVSQQLSRLRLEGLVIPRREGKAIYYRLADERPRRILEVVYDLFCNND
>gi|56695891|ref|YP_166242.1| regulatory protein SoxS [Ruegeria pomeroyi DSS-3]
MGMTRNLLAAGLAAVLALPALAAELVMVEQHGCEWCARWNEEIAPIYPKTAEGAFAPLRRVDLRAIPADL
ETARRVVFTPTFLIVEDGRELARLEGYPGEDFFWPLLEQLLVDHAGFVPKKPGSS
>gi|56695892|ref|YP_166243.1| sulfur oxidation V protein [Ruegeria pomeroyi DSS-3]
MFEISYLGALFAGLLSFFTPCVLPMVPFYLSYMGGLSMAELRGDGRIAPGAQRRLIVSSVAFAAGVTSVF
MMLGMGATALGRLFGTYLDTLSWAAAAILVVFGLHFLGVIRVPLLYREARMDSTMPASTLLGAYLMGLAF
GFGWTPCVGPALAAILMIASGMGEIWRGGLLLLVYGIGMTAPFVVAAFFARPFLGWVQRHRAAFAWVEKG
MGAMLILFAILIVTGGVNWIADAMIRWVPGFSALG
>gi|56695893|ref|YP_166244.1| thioredoxin SoxW [Ruegeria pomeroyi DSS-3]
MRRFLAILGLLALTSGAQAELGDDGLHKTAWMRDTFKDLREDLDEANAEGKRLVLFFEQRGCVYCAKMHK
EVFPRPEVSSYIEENYFVVQLNLHGDIEVTDFDGEALSEKDMARKWGILFTPTILFLPEEVAEDQSAQQA
AVAMMPGAFGAGTTLDMFTWVAEKRYALDNGEDFQRYHARRIQERSNGSTD
>gi|56695894|ref|YP_166245.1| monoheme cytochrome c SoxX [Ruegeria pomeroyi DSS-3]
MGGHMKTTILTLAAALISGAAWAGETAPGDVVYADGAVEASLTGTPGDAANGAMVVGSKKHGNCVACHQV
GALADVPFQGEIGPALDGAGSRWSEAELRGLVANAKLTFEGSMMPSFYRIDGYIRPGDAYTGKAAKGALT
PLLSAQEIEDVVAFLATLKDE
>gi|56695895|ref|YP_166246.1| sulfur oxidation protein SoxY [Ruegeria pomeroyi DSS-3]
MDFSRRDTLGLALGAAALTVLPFRVNAAAEDRIAEFTGGAEMGEGGLTLTAPEIAENGNTVPIEVSAPGA
AAIMVLAMGNPTPGVAQFNFGPLAAAQAASTRIRLAGTQDVVAIAKMADGSFVKASSTVKVTIGGCGG
>gi|56695896|ref|YP_166247.1| sulfur oxidation Z protein [Ruegeria pomeroyi DSS-3]
MASGVKPRVKVPKSVAAGEAITIKTLISHAMESGQRKDKEGNVIPRSIINRFTCEFNGQSVIDITMEPAI
STNPYFQFDATVPEAGEFVFTWYDDDGSVYNDNKSITIA
>gi|56695897|ref|YP_166248.1| diheme cytochrome c SoxA [Ruegeria pomeroyi DSS-3]
MKVRAMTAIAALLAAPLAAVAGPDSDELVVNGEINMVTQTEAPAHLDGALSELYSGWRFRSDETQALQMD
DFDNPAMVFVDQAQEAWDTADGTEGKSCASCHGDAADSMAGVRAVYPKWNEAAGEVRTLEAQVNDCRENR
MGAKAWKYDGGDMASMTALISVQSRGLPVNVAIDGPAQATWEMGKEIYYTRYGQLELSCANCHEDNYGNM
IRADHLSQGHINGFPTYRLKNAKLNTSHARFKGCVRDTRAETFNPGSPEFVALELYVASRGNGLSVEGPS
VRN
>gi|56695898|ref|YP_166249.1| sulfur oxidation B protein [Ruegeria pomeroyi DSS-3]
MISRRDFLQVSMAASALVGASGFGNWSRLAAQQALTQDQLLEFDTFGNLTLIHITDIHAQLMPIYFREPE
VNLGIGAAKGQMPHITGADFRRFYGIEDGSPSAYALTYDDFSSLARTYGRVGGMDRVANVVNAIRADRPD
ALLLDGGDTWHGSYTCHHTEGQDVVNVMNALKPDAMTFHWEFTLGTDRVTELVESLPFASLGQNIFDAEW
DEPAELFKPYKFFERGGVKVAVIGQAFPYMPIANPGWMFPEFSFGIREENMQAMVDEVRAEGAEVVVVLS
HNGFDVDKKMAGRVTGIDVILSGHTHDALPEPVLVEQTYVIASGSNGKFVSRVDLDIRDGRMMGLKHKLI
PIFSDVIAPDPQVTALINAQREPHIDQLREVIGRTADDALLYRRGNFNGTWDDLICDALISERDADIAMS
PGVRWGPSILPGQEITREDIWNVTSMSYGAAYRTEMTGEFLHVVLEDVGDNLFNPDPYYQQGGDMVRVGG
LGYRIDVTKPQGSRISDMTLLKTGEQIDPAKNYVVAGWASVNEGTEGPQIWDVVENHIRKLGTVNVTPNT
SVEVVGA
>gi|56695899|ref|YP_166250.1| sulfur oxidation molybdopterin C protein [Ruegeria pomeroyi DSS-3]
MSESSGKHSPSRRRFLTSVAAAGAGAVAAGAARAAGPDPLITEVQDWARATGDGVDATPYGLPIEYEGDV
IRRNVEWLTADTISSINFTPIHALDGTITPQGCAFERHHSGAIALKKEDYRLMINGLVDTPLVFSYADLE
RFPRENHVYFCECAANSGMEWAGAQLNGAQFTHGMIHNMEYSGVSLRTLLEEAGLSAAGDLKDKWVYVEG
ADASSNGRSIPMEKALDDVLVAFKANGEALRKEHGYPVRLVVPGWEGNMWVKWLRRIEVMDGPVESREET
SKYTDTLEDGTSRKWTWVMDAKSVVTSPSPQAPITHGAGPLVITGLAWSGRGAITGVDVSIDGGKSWQPA
RLAAPGQDKALTRFYLDTNWDGSEMLLQSRARDSSGYVQPTKAQLREVRGLNSIYHNNAIQTWWVKANGV
AENVEVS
>gi|56695900|ref|YP_166251.1| diheme cytochrome c SoxD [Ruegeria pomeroyi DSS-3]
MSKFPKLTLTASLAALMLSAPAWAGEFGLGRPALPEEIAAWDLDVSPDGTGLPAGSGSVEDGEMVFADNC
AICHGDFAEGVDNWPKLAGGMGTLDRDDPLKTVGSYWPHLSTAWDYVNRSMPFGNAQSLSPDEVYAIVAY
ILYSNDLVDDDFVLSNENLAAFELPNAEGFIIDDRETAEAHFWTAEPCMENCKDTVEITMRARVLDVTPD
AGGAEEASAEAEEAPVTEAAAEPAPVAEAALDPALVAEGEKTFKKCKACHQVGEGAKNKTGPTLNGIVGH
AAGAVDGFKYSKPMQAAGEGGLVWTEAELAAFLAKPKAYMKGTKMSFAGLKKDEDIAAVIAYLKSFE
>gi|56695901|ref|YP_166252.1| diheme cytochrome c SoxE [Ruegeria pomeroyi DSS-3]
MRWLGGAILAGAALTGVARADETARDIGDAARGEELFQVCASCHQVGEGAEHGTGPHLNGIFDRKVAQFE
DFDYSPGILRARRDGMVWDLEHLDAYLTNPKTLVSGTNMDFAGLPDPQDRGDILAYLRRFSASPQNIPEA
APTALKQDVELAPEVLAMVGDPEYGEYLSTECTTCHQVDGEYDGIPVITGWLAEDFVLAMHAYKLKIRPH
PVMQMMAGRLSDEEIAALAAYFEALE
>gi|56695902|ref|YP_166253.1| sulfur oxidation F protein [Ruegeria pomeroyi DSS-3]
MTLNRRTFLGTGVAAAATLQAPMVLGAGKPRVVVVGGGAGGATAARYIAKGADGAIDVTLVEPTRSYYTC
FFSNLYIGGFRELSSIAHSYGKLASEYGINVVHDWAVGIDRDARTVSLAGGGVLPYDRLILSPGIDFVDG
AVEGWDLSAQNKMPHAYKAGSQSELLKAQIEAMPEGGTFAMVAPPNPYRCPPGPYERVSMVAHVLKQRNP
TAKIIVADPKPKFSKMALFQEGWNTHYSGMVDWIGPDFGGANVSVDPDAMTVTIDGEETKVDACNVIPAM
KAGRICEIAGINEGNWAPVIGHTMQSRMDENIHVLGDATNQGDMPKSGFSANSQAKVAAMAVRAALTGTK
MFPAKFSNTCWSLIGTDDGVKVGATYEATDEKIAKVDGFISATGESAELRQATYEESIGWYAGITSDMFG
>gi|56695903|ref|YP_166254.1| AraC family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MTQTPFVSKAASASVSLHYDGPPQDFRFLLLPKATMLAVAAAIEPLRIANQLTKTQLYTWHTMTENGAPV
TCSNGLRITPDQALAPLPPEAMGFVCAGVEPEKSYSPAVLAWLRREYRHGSALGGICTGAFALARAGLLE
ERRFTLHWENQPGFAEAFPNLTPTPNIYELDGRITTCGGGNTAIDMMLALIEKQHGPKLAIVVADMCIHM
RSGRQSPQRSARSVAIGSRNPALIKAIELMEAELEEPLTNDDLCDRLGISRRQLERLFKRYLDQGPMAFY
LNLRIERAFIFLNETNMTVAEIAAATGFANTSHLSRQFRARYGASPHSFRKAWS
>gi|56695904|ref|YP_166255.1| ATP-dependent Clp protease proteolytic subunit [Ruegeria pomeroyi DSS-3]
MFDPVDTYMNTLVPMVVEQTSRGERAYDIFSRLLKERIIFINGPIHDGMSHLIVAQLLHLEAENPNKEIS
IYINSPGGVVTSGLSIYDTMQYIKPKCSTLVIGQAASMGSVLLAGGEKGMRFSLPNSRIMVHQPSGGYQG
QASDIMIHAAETQKLKDRLYDIYVKHTGQTKKAVEKALDRDNFMSPEEAKEWGHIDEIVESRSKGDDAE
>gi|56695905|ref|YP_166256.1| ATP-dependent protease ATP-binding subunit ClpX [Ruegeria pomeroyi DSS-3]
MTMATNSGGDSKNTLYCSFCGKSQHEVRKLIAGPTVFICDECVELCMDIIREETKSSSLKSSDGVPTPRD
ICDVLDDYVIGQSTAKRVLSVAVHNHYKRLNHAQKAGSDIELAKSNILLIGPTGCGKTLLAQTLARILDV
PFTMADATTLTEAGYVGEDVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQ
QALLKLMEGTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDKIIAQRGKGSAMGFGADVRASDE
RGVGELFTELEPEDLLKFGLIPEFVGRLPVLATLEDLDEDALVTILTKPKNALVKQYQRLFELEDTELDF
TDDALKAIAKRAIERKTGARGLRSIMEDILLDTMFDLPSMDNVTKVVVNEEAVTSDAQPLLIYADAEKGS
ASAG
>gi|56695906|ref|YP_166257.1| endoribonuclease L-PSP family protein [Ruegeria pomeroyi DSS-3]
MRIGRRGISAPFSVERGEGALPPSLAVTPPEYFEQSEKAMCRHGNREGAGKMRIRRISSGGPFEAKIGYC
RAVVAGGFVHVAGTVGQGEDVVAQCRSALEVIGAALKEAGAGFADVVRVTYYLPDAAEFEPCWPILAETF
GANPPAATMIECGLIDPKYRIEIEVTALLPQ
>gi|56695907|ref|YP_166258.1| NADH dehydrogenase [Ruegeria pomeroyi DSS-3]
MGILNTLLRAVTWWNGATLNTRIYTARKGTRVGEDAQGNIFYRNGDDSQRWVIFNGEAEASRIDPEWHGW
LHRTWDEPPSERPLPHKAWEKPHQENLTGTPLAYVPAGSLRRTKPVERRDYEAWSPE
>gi|56695908|ref|YP_166259.1| hypothetical protein SPO1007 [Ruegeria pomeroyi DSS-3]
MSSHNMTEVLVGGAVLAAALTFGIYASQATGLSRGTGGYELAASFRSLEGVTVGTDVRLAGVKIGTVTGV
DLNPESYRADTRFTVSEGIQIPDDSAAVISSEGLLGGNFLEIMPGGSAFYFEPGDVIDDTQGAVSLISLL
VKFVAGDGSGE
>gi|56695909|ref|YP_166260.1| hypothetical protein SPO1008 [Ruegeria pomeroyi DSS-3]
MIRLVAVLLALLPAPLVAGDAVTSGTGAMLRGLDKVSGQTEDFRVATGGTAEIYGLDVALGDCRYPVENP
TGDAFAYLTIWERGQRQAIFDGWMIASSPALSALDHSRYDVWVIRCMTP
>gi|56695910|ref|YP_166261.1| leucyl/phenylalanyl-tRNA--protein transferase [Ruegeria pomeroyi DSS-3]
MSLPPEILLHGYSIGIFPMAEHRNDPDVFWVDPIRRGVFPLNGFHLSRSLARRMRRGGYQVSIDRDFAGV
LDGCADRAETWINPEIRASYLALHHLGHAHSLEVWQAGQLIGGVYGVVLGAAFFGESMFSRRTDASKIAL
AHLVDRLRQTGFALFDTQFLTAHLASLGAVEIPRAEYRRQLERALNGAADFAAVIEQSPQGVIQRITQTS
>gi|56695911|ref|YP_166262.1| acetyl-CoA carboxylase biotin carboxylase subunit [Ruegeria pomeroyi DSS-3]
MFDKILIANRGEIALRVIRAAREMGIATVAVHSTADSDAMHVRMADESVCIGPPPGNQSYLSVPAIISAC
EITGAQAIHPGYGFLSENAGFVQIVEDHGITFIGPSAEHIRIMGDKITAKDTAKELGIPVVPGSDGGVAD
VAEARRVGEHIGYPVIIKATAGGGGRGMKVARNAKEMEHAFSTARSEAKAAFGNDEVYIEKYLTTPRHIE
IQVFGDGKGNAVHLGERDCSLQRRHQKVFEEAPGPCITPEERARIGKICADAVARINYIGAGTVEFLYEN
GEFYFIEMNTRLQVEHPVTEGIFGVDLVREQIRVAAGLPMSFTQDDLQINGHAIEVRINAEKLPNFSPCP
GKITAYHAPGGLGVRMDSALYTGYSIPPYYDSLIAKLIVQGRDRPEALARLQRALSELIVDGIDTTVPLF
HALLQEPDVQSGTYNIHWLERWLAENLAD
>gi|56695912|ref|YP_166263.1| acetyl-CoA carboxylase, biotin carboxyl carrier protein [Ruegeria pomeroyi DSS-3]
MTDSRHEADVAFIKALAELLRENDLTEVQVKREYGEEDSLNVRVSRVSPVAAAPVQVAVPAAPVAAAPVA
PAAPTAAPASAEDPAAHPGAVPSPMVGTVYLQPEPGAPSFVSVGASVAEGDTLLIVEAMKTMNHIHAPRA
GTVKRILVGDGDAVEFGTPLVIIE
>gi|56695914|ref|YP_166264.1| LuxR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MSDPGFEYAPIGLVELENRVIRRCNLHFASMFGGQESEYRDMPLLRLYPSHEDFERIGKRGLQVMRETGY
YTDERIMRRRDGDLFWCRARGKSLTPDDPFRHGIWSFADISEERRVVELTPREREVALLTCRGLSAKEVG
VELGLSYRTIEAHRARLLQKFGARKLPELVAKLSGMPL
>gi|56695913|ref|YP_166265.1| acetyl-CoA acetyltransferase [Ruegeria pomeroyi DSS-3]
MVSIAGWGHTKFGKLTDMSVEDMITAAGRDALADAGLGAEAVDGIWVGHFNAGLVGDGFPASLAMSIDPA
LRFKPATRLENACASGSAAVFAARQAILSGEARVALVIGVEKMTHLPTAEVAAALGHAAYQKEEAGLSFP
GVFAQFAQAYFERYGDHSRALARIAAKNHGNSVNNPLAQLQKPLDEAFCAEVSDRNPIIAAPLKKTDCSL
VSDGAAALVLVADDMLGDVTKAARLRGVAQVNDIMPMSQRDLLAFEGPRRAIHRAYDRAGVTVSDIDVAE
VHDCFTIAELLIYEAMGLAAHGHAADLLEGGVVHEGGRLPVNLSGGLKAKGHPVGATGVSMHALIARQVL
GQADAMQHPGAELGLVFNMGGSGVANYASILEPVKA
>gi|56695915|ref|YP_166266.1| AMP-binding enzyme [Ruegeria pomeroyi DSS-3]
MNIGLWLARQAQAGGERPALFLGRDLVADYAAFHDRAARVAGWLGSQGVAPGDRVALFMGNSPDYLILQY
GIWYAGAAAVPINAKLHGREAAFILADSETTITFAAPDLAAALHAAQAPGRIVETGTAGLAAILAADPVA
APAQCDPGDLAWLFYTSGTTGRPKGVMITHRMLMAVSLAYPVDVDPVTPEDTVLYAAPMSHGAGLYNMVH
VLRGARHVCPASGGFEPGEIFGLARHFTRVQMFAAPTMVKRMTDQARASGETGEGLRTVVYAGGPMYLAD
IVEAVEHFGPIFVQIYGQGECPMGITALSRHDVTDRSHPRWQERLASVGRAQSPVELRIGDGDGAPLPPG
QTGEVMVRGDVVMPGYWRNPQASARALRDGWLMTGDMGFLDAEGYLTLQDRSKDLIISGGSNIYPREVEE
VLLTHPLVREASVVGRPHPDWGEEVVAFVVGEATAAELDALCTRNIARFKRPKHYRWLPELPKNNYGKVL
KTELRRILEGEG
>gi|56695916|ref|YP_166267.1| 3-hydroxybutyrate dehydrogenase, putative [Ruegeria pomeroyi DSS-3]
MTDLSGKTALVTGSVQGIGLAIAKVLAGGGARIAVHGLADAGEAEAACAAMRAAGASEARFFAGDLRDPG
QIAMLMREVAHWGGADILVNNAGIQRTAPLSQMAGENWETILSINLSAAFYTMQAAMPAMAERGYGRVIN
IASVHGLVGSVEKAPYVAAKHGLIGLSKVAALEYAALGDRGRGGVTVNCICPGWTETAILEPQIAARMAA
LGVDRVAAMADLMAEKQPSRRASDPAEIGALALWLCAPTAHNVTGAAIPVDGGWTAQ
>gi|56695917|ref|YP_166268.1| hypothetical protein SPO1016 [Ruegeria pomeroyi DSS-3]
MRATVFRHGKRPGKDLFLAGNFQFPALVRQARPCLNERMKICAITMVYRDHWALGQWYRHFARQLGAEHL
YVVAHGADPEIARICPGASILTIPRADLSRFDTRRGDMLNAFQNGLNQIYDWVIRTDADELICLDPARFD
SFADFFARQRRSAVFALGLNLGERAEDATLQGDEPVLNHRQSAVFTGNYSKAWAVRNRIGLKSHGVQLRP
ARVEGFPFVMPRGAYLVHLKYANSAALARSADHRREVAEQPGLGNPGQAWLNPGTDSRRFFKQFEALPEL
PWEEAEPRAYADISTEPVREPGPGVVRARRDTPRLRTRLPDWFSAL
>gi|56695918|ref|YP_166269.1| branched-chain amino acid ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MNVKPDFSKNANQATTAPAFLSVWDMHAYYGESYIVQGVNFNVHEGEILALLGRNGAGKTSTLRSIARTG
SPLVTHGEIWLDHQPLHNMASYEAAQAGLGLVPEDRRIIPGLTVEENLQLAQIAPPVGWSLERLYDLFPR
LGERRKQEGVTLSGGEQQMLAIARALARDIKVLLLDEPYEGLAPVIVDEIEKTLIHIKEQGMTTIIVEQN
AVRALELADRAVILDTGTIVFDGSAAEVLGNAELRAEYLAI
>gi|56695919|ref|YP_166270.1| branched-chain amino acid ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MGILEVKNVGKRFGGLQALSDVNLSVAENTVHAIIGPNGAGKSTLLNCLVGKLIPDSGSVMFDGQSVLGR
APYEINQMGISRVFQTPEIFGDLTVLENMMIPCFARRDGAFELNALPSVGSQKDVVEQAMHMLEEMRMAD
KRHMHAASMSRGDKRRLEIGMCLSQQPRLLLLDEPTAGMARADTNNTIDLLKQIKEERDITIAIIEHDMH
VVFSLAERITVLAQGTPLVEDTPENIKGHPKVREAYLGESA
>gi|56695920|ref|YP_166271.1| branched-chain amino acid ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MLGLDKKDTSLLIIVAILTLLAPFILNPFPTGSAMAQFNAGYPDLMQRFVIFGIFAIGFNILFGLTGYLS
FGHAAFLGVGSYSAVWMFKLLSYNVIPAIALSVVVAALFALLIGYVSLRRSGIYFSILTLAFAQMSFALA
YSVLSNPKFNLTNGETGLQVYADDPQIFHRDGLPDMPHLFGLSMRSTYKLDLGAWSFDFNAGYYLCAVIM
MVMFYLAIRIFRSPFGMMLRAVKSNQQRMNYTGLNPRPYTLAAFVISGMYAGLAGGLMAAMDPLAGAERM
QWTASGEVVLMTILGGAGTLIGPVLGAGFIKYFENIFSKINDTILHQWFSFLPDGIEDFMVFIVHPFIGK
GWHLTLGILFMLVVIFLPGGLVEGGQRLGNWLRNRGKRTSEAKTKHEPAE
>gi|56695921|ref|YP_166272.1| branched-chain amino acid ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MGTMDAILLQILNGLDKGSAYALIALGLTLIFGTLGVVNFAHGALFMIGAFCAVMLQRILNLSFQTIDET
QKDFLGNPLKVDTPYVHSWFGPETGAAIIDWSVPLAVIFAIPIMLFIGYAMERGLIKHFYKRPHADQILV
TFGLAIVLQEIIKYFFGANPIQTPEPSALKGSLDIGLMLGFDPNAIIYPIWRLVYFAFAAVIIGGVFAFL
QFTTFGMVVRAGMADRETVGLLGINIDKRFTIMFGIAAGVAGLAGVMYGPLNPPNYHMGMDFLVLSFVVV
VVGGMGSLPGAVAAGFLLGVLESFASTTWATTTIPGINQIIIYLVAIIILLTRPRGLLGRKGVMED
>gi|56695922|ref|YP_166273.1| branched-chain amino acid ABC transporter, periplasmic substrate-binding protein [Ruegeria pomeroyi DSS-3]
MSKNQVTRRGVLKTGAVAGAGVALPTIFTASSAAAYTNEPTGGTVTLGFNVPQTGPYADEGNDELLAQQL
AVEHLNGMGDGGCLNTFTSKALKGNGILGKKVQFVTGDTQTKSDAARASAKSMIEKDGAIMINGGSSSGV
AVAVQGLCQDAGVIFMAGLTHANDTTGKDRKANGFRHFFNAYMSGAALAPVLAKEMGSDRRAYHLTADYN
WGWTQEESIVASTEALGWETVNTVKTPLASTDFSSYIAPVLNSGADVLVLNHYGGNMVNSLTNAIQFGLL
DKVANGKDFKIVVPLYSELMAAGAGDNIKGVLGSMNYNWQLDNEGSRAFVKSFGEKYGKPPSNSAQTCYA
QVLLYADACERAGTFNPCGVVEALEGFEFDGLGNGKTLYRADDHQCFKDVLVVRGAQNPTNAYDTLEIVE
VTPVAQVMYPPNHPMFGGDEATLGQCNPGA
>gi|56695923|ref|YP_166274.1| transcriptional regulator, putative [Ruegeria pomeroyi DSS-3]
MARDTLTGSRIRERRLMIGLRQADLAREVDISASYLNLIEHNRRRIGGKLLVDIAAALSVEPSMLTEGAE
AALLATLREAAADASPTGAEADRIDEFAGRFPGWAELLARLFRRVGSLERTVETLSDRLTHDPHLAASLH
EVLSTAAAIRSTAAILAEPGELEAEWRDRFHRNLHQDAERLAESSKSLVGWLDDSQAIEDRTGVPVEQVE
AFVAGHGNHFPELEAGGDIESVPLDDLASGAAREIARVILGDYAADARAMPLPEMEAALDALGLDPVALA
RRFDVGLPAMFRRLASLPEGVLPYEVGLVICDASGSILFRKPITGFALPRHGESCPLWPLYTALGRPLTP
IRRRVSQLGRNAVEFDCLAVAWPEEMLDFDSDPVIRSVMLILPVPATERGRQPAQPVGASCRVCPRGDCP
ARREPSILSEGF
>gi|56695924|ref|YP_166275.1| response regulator [Ruegeria pomeroyi DSS-3]
MSRRVLLIEDEPNIAEAIRFLLSRDGWQVETHADGADAVDIITTALPDLVILDVMLPGKSGMDILRELRE
QAATQDLPVLMLTARGQSRDRDMAEKAGVSRFMTKPFSNTEVLTAVRDLHAQASRP
>gi|56695925|ref|YP_166276.1| hypothetical protein SPO1024 [Ruegeria pomeroyi DSS-3]
MKGPAGEEAGRGPLQPPPVFLERQSYRRRRLMDAARLLPLMGAALFAVPLLWPTDEAGTVRMSAAITYVF
GVWAVLIAVSALFGRATRQGGDRQIAQEPER
>gi|56695926|ref|YP_166277.1| sensor histidine kinase [Ruegeria pomeroyi DSS-3]
MTSLNVLVAVCMAYVILLFGVAFAADRLSSTGRTTWLRSPLVYTLSLSIYCTAWTFYGAVGYAARSGLEF
VTIYLGPTLVMIGWWWGLRKLVRVGRSQRVTSIADLISSRYGKSNTLAVCVTLLAVIGVTPYIALQLQSI
TLSFDIFAEADPVSRPGEGSSAFWVACGLAVFAILFGTRNLDANERHHGVVTAVAIEAVVKLVALLAVGV
FVVWGIAGGLGDTLARIDASEIGVWQVDHGRWATITFLAAAAFVCLPRMFQVMVVENDDERHLRTAAWAF
PLYLMLMSLFVVPIAVVGLELMPEGANPDLFVLTIPLAEGQETLAMLSFLGGFSSATSMVIVAAMALSTM
VSNHIVMPIWLNAQGSGASVSGDVRSVVLYARRVSIAVILALGYFYYRLSGGGAALASIGLIAFAGIAQI
LPALVGGLFWRGATRTGALVGLTVGFVLWLYTLLLPGMGAGVIAPQVMEHGLFGLSWLRPQALFGIAGMD
PMVHSVMWSLSLNTAAFCIASLLSFPSPLERLQGAQFVNVFDHSAGPRGWTGSVAQSEDLMIMSQRIMGA
REAQEFFQSEAMAQGSRAYLPEPTPAFLERLERELSGSVGAATAHAMIGQIVGGSSVSVEDLLAVADESA
QLLEYSSRLEAKSAELSRTARKLREANEKLTQISLQKDAFLSQISHELRTPMTSIRAFSEILRDTDGLAP
VDKTRYAAIIHDEALRLTRLLDDLLDLSVLENGQVTLNMGQGRLVDVLDRAMATALTGTDRPLRVRRHRG
AERIVLRTDLDRLSQVFINLITNAQKYCDAADPELSVTVHDVGGRIVVDLIDNGSGIPRDARKMVFEKFA
RVGAEKAGGAGLGLAICREIMQRLGGDISYLSGQEGGAFRVSLPVGMEIAAQ
>gi|56695927|ref|YP_166278.1| hypothetical protein SPO1026 [Ruegeria pomeroyi DSS-3]
MMATDAENKTVLERKLALARDERQGDTRSILRALRLALARAADEAVGLAMSVIGATQARRELDELGRAVA
EDRLYLMLSGPEGALGAACMDRACVTAILQQQTMGQVVAGGFVERAFTGTDAAMVAPLIDALLPRARDMV
DQPLDRVCLTGYEFCARAESRRALLLLLEYDRYRVFDLTAEIAGGKAQGQITLILPDRPEAALEGAEGAA
APQGLHLDAAFGVVRADLDAVISRIRLPLAAFAGMQPGDLLPLVGLKLDRTEIVTIEGRQVALARLGQCR
GMRAVRLNEKLPDPERIEQGPDGFLAHKPGEGQRPETPPDPDVIDHEARPPARPRHRAEDYEDVDTEAEG
DLDALSEYDLPALSTDQVATEIAELAGLPREEETAESN
>gi|56695928|ref|YP_166279.1| hypothetical protein SPO1027 [Ruegeria pomeroyi DSS-3]
MDIRPITPRYAVSPQISVEDITAIAAAGFTRIICNRPDAEVPPSHQAAAIGEAARAAGLEFEVLELTHQT
MTPENVALQGTLAESASGPVLAYCASGTRCSVVWALGQCGVLGADDVLNKTAAAGYQLEALRPRLEEIAQ
ARG
>gi|56695929|ref|YP_166280.1| YeeE/YedE family protein [Ruegeria pomeroyi DSS-3]
MRLLISLIAGALFGGGLFVSGMTDTRKVQGWLDVFGDWDPTLAFVMGGAILPMLLAWRLTEGRKPLAGGS
FPALPRPEMDHRLITGSVLFGMGWGLAGLCPGPAIASLSYGGVGGLIFLVAMLAGMAVAPRVGTQLDRLA
ATA
>gi|56695930|ref|YP_166281.1| YeeE/YedE family protein [Ruegeria pomeroyi DSS-3]
METDWIWGLVGGLLIGTGGAVYLLGNGRIMGASGILGGLIDGTGRSNWVERAVFLFGVVVAPLLLWPLYS
VEIDTHVTSDIWVIVAAGLLVGVGTRIANGCTSGHGVCGISRFSLRGIVATVFYILAGGLTLAIFRHVLG
VI
>gi|56695931|ref|YP_166282.1| metallo-beta-lactamase family protein [Ruegeria pomeroyi DSS-3]
MHHIHDSPYDLGNQQEPVMTPFVKAFFDEATFTVSYVVREPDGRACAIVDSVLDFDHASGRTNTASADAI
VNYVTAEGLNVEWILESHVHADHLSAAPYLQERLGGKIGIGANITVVQDTFGKVFNEGTEFQRDGSQFDA
LFREGDSFHIGQMRGDVLHTPGHTPACLTYVIGDAAFVGDTLFMPDFGTARCDFPGGSSATLYQSIQKIL
ALPDDTRIFVGHDYKAPGRDEYAWETTVGEQKALNVHIGQGRSIEEFVQMRDARDATLGMPRLILPSLQV
NMRAGQMPPADEQGNVYLKLPVNKL
>gi|56695932|ref|YP_166283.1| hypothetical protein SPO1031 [Ruegeria pomeroyi DSS-3]
MWALQGCARIRQPLRKQADRAFGLGMGPIVREISYACYLPVAKSVLTMGRGHMTAQDLYRAAERLERRVE
GASLNTRLELQPEFSKIMDRMRQQGLKVPARLRQLDAALCEDAVEAQFDNMPV
>gi|56695933|ref|YP_166284.1| hypothetical protein SPO1032 [Ruegeria pomeroyi DSS-3]
MLFDIIIWAGAALSLLGLAGLVWCILRVNRARKAGLSDDDLRAAVQAVLPWNLGALFLSVIGLMMVMVGI
SLG
>gi|56695934|ref|YP_166285.1| hypothetical protein SPO1033 [Ruegeria pomeroyi DSS-3]
MDQPQSDANYGIAAGELRQFIERIERLEQEKKDIADQQKEVMAEAKARGYDTKVMRKIVALRKRDKDDIA
EEEAVLEMYKAALGMA
>gi|56695935|ref|YP_166286.1| hypothetical protein SPO1034 [Ruegeria pomeroyi DSS-3]
MQVVFHTGAHGTDDDRLIRCLLSNKEPFSQRGIAVPGPAQYRALFKKVLTALDEAEPEPQAREVLIETIL
DGEVADRVIFSDANFFGSHWSALGKGMFYPRAAPRMANLQSIFAYDQVEMFMAIRNPASFVPDILGALPE
KGAAEAMDGIDLNKLHWTGLVESIRAAAPNVQLTLWCNEDTPLIWAQIIRDMAGLEHGNKIVGGFSLLSE
IMSKEGMVRFRAYLAEHPELSEMQKRRVIAAFLDKYALEDAVEEELDLPGWTHELVDQLTERYDEDVFSL
QRIPGVQFIAP
>gi|56695936|ref|YP_166287.1| phage integrase family site specific recombinase [Ruegeria pomeroyi DSS-3]
MPQIKFIDTKVGAIPTPDKTVWYTDPEQKGLRLCVTKTGVKTWYVNKWDPTANKVRSVKLAQWASKVTHC
KWAKDQRGLVAHGIVSGDVLNKAETQAKAAVEQANALPTFREALEQFIEHRTTSRQSGKARMMETTAKDY
RSTFNKHLAHWADVHVDRLPILEINQYLNAVQITRPNAAHVAATVAGATVRFINKLCALALPIPSLLEGT
KMRSRVETGKLDMHVPWANRWDEIEAIQNEHIRLCWKITWYTGFRGRGLRALTWDQVDLDAGVVTFDRLK
RQEVERTIVLADDVFWLFKRLHEIRHDDCDWVFPSRVVRRDTRGHLDVLDKLPLTKPGDLRHFWMTVARE
VAPRHVHRWLAQQTMTDNDLRMLGHYGEPTYEEQKAAANSIAAAISKRIQAAPSSVVELRRNTA
>gi|56695937|ref|YP_166288.1| hypothetical protein SPO1037 [Ruegeria pomeroyi DSS-3]
MPNCAIPSRRCGRMARGESVMAGNRIRRQNTTDEFERLEPGVAQDLLAFNITKQRIVDLCNKEFDEDPLE
GAKNYSSFHRALDGHEVYSGIVHALTNLRDDQATNPAKYLPKEGPGEDLAEWMAQFAKATWWYNLLDLEM
TQSTLNAWFSGRGKRERPDVREQVEAWWAKLSEAVELVMRRNRAEARSRHHDSEVKRDEWDKPRREAMSW
DTWCKDQLEDGLSMEEVREHFIGEALIYKTSLFDVDIIDLANPQNPLEAESPTDLERNLCEYMWSELVER
DFACAVSRHPTEFDPTPFFEEDRWGDRRNEECPKDINSELYKLNYRTKVTRFWDAEQRCVSTEREIVAVS
KDGIDWQEPTERQKQGWSSGFDYWLAAMDAGESTDSQYKQALDAASLRVRQIDRKLSLEMDDAERRSLKV
QLEEAQDWENHCHNDY
>gi|56695938|ref|YP_166289.1| hypothetical protein SPO1038 [Ruegeria pomeroyi DSS-3]
MTRMPFDLPQTMTPTERARQLYADGHSIQTVFMALAFVTTKSEREQIIRALVQ
>gi|56695939|ref|YP_166290.1| hypothetical protein SPO1039 [Ruegeria pomeroyi DSS-3]
MTKIKHRTYQEQRQAYDKIRDVIAGEDRLKNAGARYLPEPEGMTTAQYTRYVQGASFYAVAERTLRGMVG
AVTRNAPVLELPERIAGMRDAATFEGHSLDVLLESALREVLSLGRFAMLLDYPTDGAAPGSAPFISTFDA
ESILDWKEELVGGRQKLTYLRLHETNHDLEDTGVEQHLVLTLDPAYTVKRYHVKSQRNGPDIQSVEEVQV
GEDITPTIDGSPMFDIPAVIVSPYNLKADVEKPPFLDLVNVNLAHWRVSADYYWSLYLTSQPTPWVAGSI
NEKNKPRQIGSGAFWVLPQGAQAGMLEFTGAGIAAQKTALDDLTAQMATLGARMVYDGKGRNETTDTARL
RHRSELSLLHSSVNMVEAGLTKLLRLAAEWTRPGTADDVVFKLHRDFVTAQMDPAILTALLKAYTAGAIS
HDTFLMNLKKGELMDVNRALDDERDLIDEDDNVLPMPGVA
>gi|56695940|ref|YP_166291.1| hypothetical protein SPO1040 [Ruegeria pomeroyi DSS-3]
MMLTDPDFGQHNSRTPPEELLIFAVLSRAILDLFGPVALASNKAEGKKSRYEALRFLTDHSGAWAKRRTE
LCDAIGFNGDDVRARVIRVLEGDTRALDVYEGRGSLNQVEKARELWECEKQARADAQTRRKVKPKRQGVR
YMEARPKVMALLDRPRTVKELSDETGFSDGVVRTVLNKAIEKGTVEKQGAAYRVPDTPVAATAA
>gi|56695941|ref|YP_166292.1| hypothetical protein SPO1041 [Ruegeria pomeroyi DSS-3]
MGMTRPNHEEPEMADENDKQAEALIAALAPKIAEAILPQITESVETQIKGVVTKNDELLDKLAKQKADDN
HSKLLAAAESQYQARLDGNGLYQGRKPGDSIKIKKSDARSVSKYREAKALAEKEGVPLEIVAND
>gi|56695942|ref|YP_166293.1| hypothetical protein SPO1042 [Ruegeria pomeroyi DSS-3]
MTKKVTLVPGKGPVATVHKKRGPPKGTPVKAKQPYKMELLPDAKREHYTREIVLGRMSMFQAGKELGISD
TSVARYITQLPEDEKLAILATAMHDAKVKTAMQHAAIVNEFGEDTDKDLKWVLRELKSLLESAKGDEDRM
MQLGALKELRQSLMSLADLHGKLNKKMDIHLNLNESPQFIQLRSIILKVLNNHPAAKHEFLNEMDAMGVI
QEPVLVDDRRPA
>gi|56695943|ref|YP_166294.1| hypothetical protein SPO1043 [Ruegeria pomeroyi DSS-3]
MMDPHLLSFLQGLTVSLDPVERFRLAIGEPDPWQKTLLSTDPRLNEADRMVLALCGRQSGKSTSAGGLGY
DDFSQARR
>gi|56695944|ref|YP_166295.1| hypothetical protein SPO1044 [Ruegeria pomeroyi DSS-3]
MLPRRRCSDGLLPYEARDRAHLLAVHAEPANRIFLRDVDRRQTGAPHHGALHRHPPTRGASRLRQSHHVR
HHVPARTPVRVCRFWNAPPVLGHARKFEQPERQRIGAVMTQPKYEFLKDGRVVLPSNADPAAYGTVVHGW
LKHHVGMDLGRNDPSAIVVVRDTCYPQFTGRGFEQELGPRKCTVVFQETIQLYSYTDLADFLAKRLNQIP
HWSLAIDASGLGAPFSSTLDNAGIEHHAVVMTAGANMSRSGKDVKIAKTMLLENMAVGLETGALTVAHDL
EGKQDLLNEIASFELASTSSGNLVLQGGGKGHHADRAIATALAYLSATHLDTTLSGSYRLSGWA
>gi|56698729|ref|YP_166296.1| hypothetical protein SPO1045 [Ruegeria pomeroyi DSS-3]
MLHEGASHAGKNSYDLCMQSVAHHLQVEAVKLVPASTVDADSYARSAFNRYYYATFLCVRSALVSIDRKY
ESSLNHKGVPDLLRGVIQKRIKAIQKKADKLGDQLLVKDCRQANSRNLKFANTLEKAYAIRVVADYTPET
AVDFRSSRFSLSGVAVTEAHDWLGEATLWASLLLDVIRQENA
>gi|56698728|ref|YP_166297.1| hypothetical protein SPO1046 [Ruegeria pomeroyi DSS-3]
MRSLEKVTKYLVDSGLKLSGPIARRDGENSDLYAFVEVTRDEKGHQKPSNLRLSRLTKELLDDGIVVKFI
LNDVSNADFETGLRATLLHAFPEFIRNCFLSFDNDGAVVWIVPKISAVREHLGSIANRITIYLGNADITL
SEVKLTVDENLPSRTAILSELRISAPTTSEHLAERLSEKGFSTPPIDYINRHLDALRRANHVIRRKDAHY
CLTASALKVLGTVKRRSSPDIARFLDLARRGT
>gi|56698727|ref|YP_166298.1| RNA-dependent DNA polymerase, putative [Ruegeria pomeroyi DSS-3]
MRLPHQLTGSRFFSFSDEGEFLKSVSAVVDEEEFVRIGSLVQAGLMPITSKEVLATMLGVNPGIIWSLEN
KPERYYRRFKIPKGKGEREIVAPKVGLKVIQKWFSVQLQDCARIDDHVFGFVPGRSHIDAASVHTNANWV
YSIDLTNFFPSTPINWVASSLINIGYDADSADRISKLCCYRGALAQGSPASPVLSNISMRGIDAALGALA
AEMDVRVTRYADDITFSAAGEFPQVLPERLESLFSQTPWKISQEKTYFSEAPVRLKVHGLVVNGNTVKLT
KGYRNKLRAYRHVLQTNRCRQEDLARLSGHVRYASQVSSRDD
>gi|56695945|ref|YP_166299.1| hypothetical protein SPO1048 [Ruegeria pomeroyi DSS-3]
MSEERFHIAEWYGNPFHRLGDWDRVRLAQHKVGGATMSKAEIDRLVVLEDKAVTEALTSRESDRLSVLRD
KLTRQQAEEIPCPFRPDTPNATCTKPGGVCSIRVYRGEKNRVEPITGERGRLRALCPWRFHQDGKAFSEV
GKRLLNDPDPIKAGEVGFLESSGNLDSDPGEDVGRIDMILVKSNGVEGAPMDWVAVEVQAVYFSGKKMSI
EFDHLIKTQGKISMAREKRRPDYRSSGVKRLMPQLQTKVPTLRRWGKKMAVVVDAPFFYSMGEMARERDV
SNADIIWFLADFKEDLNGGGFKLEIVEEFYTTLESATLGLTGGTPVSQGDFEARIRAKTDG
>gi|56695946|ref|YP_166300.1| C-5 cytosine-specific family DNA methylase [Ruegeria pomeroyi DSS-3]
MAHTAIDLFCGAGGLSAGLEMAGFTVLAGNDIFDAAGKTFEATHPRAKFIPGPIEDLTIEHLLEVTGLKP
GELTVLAGGPPCQAYSVYNHQRGMHDERATLFKEYLRIVDGLRPEWIVMENVTGIYSIGGGEAVAAIKSE
LAALGYEVEEAVLRAEEYGVPQERRRVVFIGNRVGVPISHPEPTHGPGRSMPFVTIKDAIGDLPALENGE
AKPDAAYLDGKPTSYQRQMRGNATVITNHAAPRLGQVNMDRLPHIPPGGSWRDIPFDLLPAGMKRAKRSD
HTKRYGRMTWDGLSCTVLTKCDIHWGAYIHPEQDRAISVREAARLQAFPDWFEFHGSRTDQYVQVGNAVP
PVLGKAIGDHLMGLIKARSSKAA
>gi|56695947|ref|YP_166301.1| phage integrase family site specific recombinase [Ruegeria pomeroyi DSS-3]
MSSAVVGLENDDDDYDRREVVAESLRGVPDKALTVVALMDPERPAPVHTLQDARNIYLKERLGDDEDGRK
RVDRVFKRVEEALGDLTKLPLSGLKREHARKVRDHMLQSEKKGGGTLSPATVERELNLVTAVVSLALREF
DLAGEVANPFEKLPVGSAGNEALKNESDKRDPLPADVIKAMRERLSSGAVRLPEIGLIWRLLEGTGCRMS
EVTGLLVDDVDVTSDLPHIRIQWNEDRRLKTQVSIRSVPLVGDALDAAKEALELSREGRALFPRYSGKRG
GDGASQILMKHLRTITTNPRHTNHSLRHKMKERLVTADVSELVQNFLLGHTLRGEGNTAYGGERAKLVVT
TKALKKALGLPE
>gi|56695948|ref|YP_166302.1| hypothetical protein SPO1051 [Ruegeria pomeroyi DSS-3]
MSNGWITASGEQEVCTSNIATPEKIAEITARQSRPDTTVSREVHMPFNGGPARVTEQHNGEYQAYQDRSF
KGSIIETAAAEGGHMIVNRAVRGSDQVTLPGGMTSIAADLGFLVRNPNGSYSDAPRKTDLKDPTAGALPG
KPDASSVKGEASGSDSDDTFSLSEEGEAAMKTIVESCFQGDAIRGMDEILNHGEVSPNTIGKLASAANME
PHEMAEIVNKAHQGFYDAVAQRIEASGIDGDAFEAFLKSDLQRLGKFTHAARQLVLGNIDEGFEIIDEAK
ERFLWQADRFMQDDVKAALDEAGYGWESDGKGRLIVVTNDFGKIPFEVAVHQGIIRFI
>gi|56695949|ref|YP_166303.1| hypothetical protein SPO1052 [Ruegeria pomeroyi DSS-3]
MSIIETLPTRSQKKRSRFTSELRRQLVHAFGGPRFAPLDEKYKTAGSKRQDRNVPVWWRSIRIRNEVQIT
CDLIAEDYEAKTGVRLPPAEIIAAAMSITLPELVERLAEDAEDEVAAAEQQQRLHDGLVKSGWRS
>gi|56695950|ref|YP_166304.1| hypothetical protein SPO1053 [Ruegeria pomeroyi DSS-3]
MLLAEFRSQDMSPQKPMLHMVCGKIASGKSTLSAELACAPNTILVSEDAWLDALYGEQIQDGADYLRYSA
RLRTIMALHVTALLDAGLTVVLDFAANTLAQRRWMADIVRASGAAHQLHYLDVADDTCLNRLRARNAEGS
HAFAATEEQFRRFTAHFVPPTEDEGFTLVRHDGQAR
>gi|56695951|ref|YP_166305.1| hypothetical protein SPO1054 [Ruegeria pomeroyi DSS-3]
MSPLVFVLTQFAILAYAVLGGVFLAFSDFIMRALALTSATGGIEAMQVINREVFRWVFMTLFLGMAAISA
FIMVHSALYLAGGPGTLILVGALVYLFGCFAITVIFNVPMNQALADMDLSAEATRDFWTGTYLPRWTMWN
TIRMLACILAATMMLFGLVWFTQSQTRLA
>gi|56695952|ref|YP_166306.1| hypothetical protein SPO1055 [Ruegeria pomeroyi DSS-3]
MQMALTVLEKTALWASGLTAVGIGACILTAPHAFFASYAIILGDDPSLLSELRAPAAGLAAFGVLILAGL
WRAALTPLSKAAAMTIFLAFPAGRIIGVIVDGLPSAPIIGALLFELAIAALCVLAFGRGATPIRAKHPIG
RPKH
>gi|56695953|ref|YP_166307.1| hypothetical protein SPO1056 [Ruegeria pomeroyi DSS-3]
MQTRPILVVGATGKTGSRVAAKLEAKGAAVRRGSRHAEIPFDWESPATWAPALSGVSRAYVTYFPDLAFP
GAVEKLEAFTKVAAASGLDQIVLLSGRGEHHARLGEKVVETSGIPFTIVRAAWFAQNFSEGYLRDPVVAG
VLPMPGGDIAEPIIDIDDIADVVVAALSEDGHAGQLYEVTGPRLMTFAEMAKVLSTATGRPIRHLPISFE
DFHANVAAAGGEFVADVFTAIARETLDGRNAYVSDGVERALGRKPRDFAAFAAAAASQGLWTAAA
>gi|56695954|ref|YP_166308.1| AraC family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MAYVTSLFARKMVAAAGAGIDQRATLEGAGLNPDAPWDPKVMIPATTYYEMLEDMAEQTDVTELPIHVGA
SMRCDEYGALGLAWKAAPTLGASCARIARYARIWTGVVTYELREHPQGTLFILHREGERRLGLRLSNEAT
LASAVALARQVCPVPFSPLAVFVQHKAPESKAFHEAWFECPVTFGADLDAILISREAMERANILGDEGIS
RYLMSDLDGELARVQMPPAVVGQAKDAIAQSLNAGTPRMADIARGLGLSARSFHRRLSEHGMSFQALTEE
TRRELAEGLLRDEQYSLAEVAYLTGFSEQSSFTRAFKRWLGTTPASYRKALS
>gi|56695955|ref|YP_166309.1| acyltransferase [Ruegeria pomeroyi DSS-3]
MSSASLKSFIHHARYFPLWSALTLSQWRSFDERSRSLGATFAAVMRWFPPARNRFDREARRVFPEMTRGA
RAKLGQSMGRHMGRTLFELYHDAEFQTQHQKFRISGPGLEALKTAHAAGKGAIIVSGHFGQWEAIRAALK
MHDMESGAIIRTHKNPHYARRIRAGIEAGGTPILSTGRAGTMALVRHLRSGGIISILLDEKYPEGVRLPF
LGVDALTSLSAAQLALKYDVPMIPAYGIRIEDGDAVQVIFEAPIARTDSVTMTRAFNDSLSARILANPDQ
WYWLLRRWEGA
>gi|56695956|ref|YP_166310.1| serine/threonine protein kinase [Ruegeria pomeroyi DSS-3]
MALNTLVDTSIEADQQDDLQPGTTLLHGQYTITCFLNNGGFGITYLAKDSLDRTVVIKECFADAFCRRTK
TLVSARSRAHQGELKSIIRHFIREAQSLSKLKHPNIVGVHQVFEDNDTAYMAIDFVDGRDLQDILDDPNA
TLTPEQIVNMTRKLLSAIGYVHKENLLHRDISPDNILLTKDGEPVLIDFGAAREETSADGRKHSALRVVK
DGYSPQEFYIAGSDQGPWSDLYALAASLYHVIRGEAPVNGQARLVAIAEQRPDPYAPLAGDVKGYPEGFL
EAIDKAMNTKPSTRLQSAEDWLAMLDGNQTAPVAPEAVNNNTAPATEQKQRSRLPAVSLLAVVAGLGVAG
FVFYGNNKAEKGAELAAPVAAQPVKSAQTEPVAGGSSEAPTAAKPTSEIAVAIAPPPEPAAKDAPVAEVT
SQAAAPEIAAVPAETAVVAEPAQTAAPAADTAAPAATESAAADAPGVDAEQAAADSDKIIAAAAAPTETA
PAVEAPEVKAAPAPGHEVTYALWDVSIPFEYEEKIVRKAQVVSITGIGTETDLAKTGAWIAPGVEIITVN
NRPLSTDSRFATQLLNAMQIDPDGYTRVSIRYKDAENKRFEMGLLAVPVLRRTGMTGGLQFEAGMQDGAW
VTVVSQVAAEGAAQFQVSDILLRETTTGSRLTTADGLSEIMQSLKERDAATASFDILRDGQPASVELKLA
GHD
>gi|56695957|ref|YP_166311.1| hypothetical protein SPO1060 [Ruegeria pomeroyi DSS-3]
MRKTTILMGASLLAIAAAAQTAQAQQACEIYQVAPGDNLLKLTQKVYGHIDFNVIYSANAAVIGHNPNII
KTGSKLLLPCADGSLPGTTAAEEKAPAVTTQAVVVNDTAEAADAAAVAQALAAAEASVEAQTALETQAAL
EAQALRDAEAAAQAEAAAQAEAAAQAEAAAQAEAAAQAEAAAQAKVTAEAEIAPEAPVAVTPLVPADPEP
MVLITGNDFPPFTGENLPGRGLFTQLIETAALRADPDTEVSVTFVNDWESHLETLLPAMAFEGSFPWLKP
DCEEYQLLSGGDRFRCDTYRFSDPFFEVVDGFFATSGSPFVATFDYDDLKGSRICRPEGYSMAHLDTAGL
TSETVNFYRPVQVAECFTALAAGAVDVVALDTLVASDTLATMGLAGQILENPNLGEVKTLHAIVHKDHPR
AEETLGLLNSGLKEMSASGEWYAIISKALQREIRPLTN
>gi|56695958|ref|YP_166312.1| LysM domain-containing protein [Ruegeria pomeroyi DSS-3]
MTMLKPLVHKCATTLAAALCLATSAEAQEACSSYTVQHGDSLGSIAQSAYGSFDYQMIFNANRNALGSNP
NAVEPGTVLQIPCADGSIAGMERAQAVIKREEAKQEERDIPEVYNPPIKFLGGNDWKPFMDETLKGGGMM
VRLSSTALKRGDNDRDHIMSYIDDWGAHLTTLLTNGAFDVAIGWTPPPDCTKRDLLDEAALYRCDELVFS
LPIYETVTSYWSRTDSKYADVKTWSDYAGAVICRPEGWSTFDLTLEGLVDPVVTWKFMPNASDCIKAAVD
GDVDMVSLDLESALGAIEEVPGSADVLQPNSNLSKVEPLNWVMHKNNPRAAQYIELLNAGLTEMRESGEW
YAIISDSIAEYNQFGS
>gi|56695959|ref|YP_166313.1| LysM domain-containing protein [Ruegeria pomeroyi DSS-3]
MMKFSKTKTLILAGVAIAALPGIAAAQVACAPYTVKDGDSLGSIAQAAYGSFDYQMIFNANRNTISNPNS
LEAGTVLQIPCEDGRLTANSDVTEIIAQQEEKQSKRAKSSIYEPPIKMVSGNGWEPFTGESLKGGGMLVR
LATTALNRGGNDRDYNLSFVDDWKSHFDTLLPLGAFDVSIAWYKPNDCSDLENTDSDTKYRCTQLNFSLP
IYESVSAHWTTVDNPYANIRDYADYAGAKICRPEGWSLAELSGQGLVEPVITVLHPTTAVECIRMLMTGE
ADMALLDLEGGDAAVSEVPEAEGKVQLNSNLSELQAIHFVTHKTNPRGRVYLTLLNKGLNEMRESGEWYA
IIADSLAEFNKIGS
>gi|56695960|ref|YP_166314.1| hypothetical protein SPO1063 [Ruegeria pomeroyi DSS-3]
MGFFGKLIGRQDQLAEPDRMGRLRDSDEAAQQDLLKAVAQQTRTVELDLGPFATERTPPASAAVPAQAAP
EAAAGIWDLDSAAGSPAAAPSGGAGLQIPQPGGEMPDLTAHVSAAPARKRRAKTRLLGFDTSDGQVVDLF
NAPDTAAAQARDARFPVGWIVVADGPGYGESFTLKAGMSAIGRGEDQAVALDFGDTAISRSNHAAIVFDP
ETAQFFLGHGGKSNIVRLNGQPVISNESLKSGDMIRLGETTLRFVALCGSEFSWSANGGQEAEHVEIA
>gi|56695961|ref|YP_166315.1| serine/threonine protein phosphatase, putative [Ruegeria pomeroyi DSS-3]
MWKSPEPRFDVAAAICQGARDYQEDAIITDFPSGTDIGMAVLADGMGGHAAGDVASKMVVTEAFSKLKFE
SVNFAEYETQIPYHLTHAAAEANSCVHEYVQDNPSVRGMGATLVSLVVIEDRLYWLSIGDSPVYLLRGGK
LKQLNEDHSMAPQIDMMVKAGLLDAEAAQNHPDRNCLTSVILGENVVRTDCPKTPFKLEVGDLVVVSSDG
LQFLEDARIEKILQKYRRRKSAEIVERLLAALDELADPDQDNISFAVIKLNHNKPATRKMRRKPVDLVSD
NSASATRVVAMNSATYPQPAEGEPDQGGEVVKLAAKGR
>gi|56695962|ref|YP_166316.1| hypothetical protein SPO1065 [Ruegeria pomeroyi DSS-3]
MTQSETAQTGEAVRRALADGHIPAHLQAAAGALLQKLDQPVGVTLFGLPGSGKSSVVNLLLGREVIPAGI
SFPTLKISGGPDAASSGVLADGSPFRLSGFDPVALASKAAVYIEARLPLPALNQISVTEIVAPDAAALER
AVPWAADRTGISLWCTQEFGAAEQAAWSRASEQMKDSAFLLVTKADDLAAQGRLQPVLAALQDGAAEQFN
QLLPLATLEAQAARHPDGAVDRDRLRRSGGQALISVIMHEVKLQRQAALDQADSLLRKYRPATPKADPAP
AVSVLPEAEAVHEQAAMPAVAAAPAPNDVQARPAMPATIPPEQPEAVTAADTPVPPPTAVPGAAADPALG
PEIRQAYDQALDYLSGQAQSLSQTLQTKTARDHAPLIRQTLQSVQWLSEHLDECGNGSDGALAQMRGAVS
EAEDLLHLIQVEEDETSLFDATSILLQLKRDMQAQLAA
>gi|56695963|ref|YP_166317.1| hypothetical protein SPO1066 [Ruegeria pomeroyi DSS-3]
MTHDDAIADNLAALAARQTVFRDGKRVISNGFFPPPLPAILQEIATTVLPRQVTFQAGDSHLSLVVSERR
LMALTSASSDLAEVQPLIGTGLSHDQPDVLEAVASALVRLSQMEQPVLVDTGFSGPSEGQSGLGVPLGML
KDLIALDQAEQERPMAFFIDASADLYVACLLHTDGTWMEAAEDETVLASLQQVADVQWERFQASFAKHAA
PLAAPRLISLGAVLEDGLCVSVVWADGEYALFAHSQADLVGLHEMWRRVFTL
>gi|56695964|ref|YP_166318.1| hypothetical protein SPO1067 [Ruegeria pomeroyi DSS-3]
MTCGPAGTGLSSRASEMTVLEALDRLHTQFPACGTLAYADLAAGMVLVANSQCALDRHALDALCAEAGCL
LGEASSPPLGSNAPDIALAQQAGRLLLALRAPEQPSDALLCLADPELDLGGFRSAARDCLTAISAEA
>gi|56695965|ref|YP_166319.1| hypothetical protein SPO1068 [Ruegeria pomeroyi DSS-3]
MTTPEGGARKPRIGIMGEFSAGKSTLSNLLLGQRILPEQVTATRLPPVWIVQGDKPAQRAALDGSLHPMS
LVDLEEISLEETLYVKIGIDAPVLDECDLIDFPGISDPNMPSEVWERMLAEVDSVLWCTHATQAWRQSEA
AAWGMVPEAVRQRSLLLITRFDKLTTPLDKLRVQTRVARETEGLFAGVCPISLTEALAAAPDSPEWEASG
AETFADALEAVVRAAACGGLPEAMPAQTQLTAPAAPEPAEPSTSAPQPAPGRVMPRRVRPKGETRTPRPS
ARPQAADQDLSALRREMQET
>gi|56695966|ref|YP_166320.1| hypothetical protein SPO1069 [Ruegeria pomeroyi DSS-3]
MDETQESQRAGIRALPFLHLGHGSLSRLAGDFEELKDLLLDIHALEGKGRRSQVARQLKELEDFKPSVTM
LGQIKSGKTSLVNAMVARPGLLPADVNPWTSVVTSLHLNAPRREEDPVASFQFFNGDEWDHLVANGGRIG
ELSMRAGADEELQKIQAQVAEMREKTRKRLGRRFELLLGQKHDYRHLDDELMQRYVCLGDDFEMAGSSDQ
QGRFADITKSADLFLSLPSLPVPLCLRDTPGVNDTFLMREQITIKSLRNSRLCVVVLSASQALSSVDMGL
IRMISNVRSEGIVIFVNRIDELPDPINQIPDIRDSILATLQKMNGPENPRIVFGSALWANAALAPQTHPL
NESSAASLRSYAGAVLQEAVQNPEIDAALMWQLSGVPDLFQTIGERIADGVGARLLSEVRQRAANQVSSM
QAACTVASMRIEGNQISVIEPAALNQMLRRLESVSMAQMDTALDQVFATFSARVDQAHNKFLERAVASLL
QHLESYGENETWQYAPDGLRILLRSSYQVMRKNLLAACTQVYCDAASAIHDTYEQTVSIQVSGFRIAPAA
APEVPPPVAIGATIALDLQTSWWKGWWQRRRGYRAYASSFYDLIKAETAPIIHELKEQQTAEIRQDARER
LMDFFSEQRALLMEVAEKTRLSVGDLNNLFGIAAQQEQAELLGLLLKELTSSDAGQTDAPAKSTREGAAA
>gi|56695967|ref|YP_166321.1| putative FAD-binding dehydrogenase [Ruegeria pomeroyi DSS-3]
MGANTADAIIVGSGLAGLVAAAELGDRGKRVILLDQEPESFLGGQAFWSLGGLFMVDTPEQRRMGIRDCA
DLALRDWLGSAQFDRAEDAWPRKWAEAYVEFAAGEMRPWLHGMGLRWFPVVGWAERGGSYANGHGNSVPR
FHITWGTGPGVLAHFLRRVQDHVAAGRIEMRFRHQVSHIIMQNGAATGVSGEVLAEDSAQRGQRTNRDEI
GEFEVYAPSILVTSGGIGGNFDLVRKAWPRDRLGAPPPNMVAGVPFHVDGRMIAISERAGGHVINGDRMW
HYTEGVRNWDPIWPEHGIRILPGPSSMWFDARGNRLAPPCLPGFDTLTTLREILKTGHDYSWFVLTQKVI
KKEFALSGSEQNPDFTSGKWSEVIRQRILSGKSATAPVEAFKEHGEDFVVAHSLSELVRGMNQLGEVAID
EDHLRAQIEARDAQMDNPFTKDAQVMAIHAARNYRGDRLIRTAKPHKFLDPANGPLIAVRLHVLTRKTLG
GLHTNLDGQMLGSDGQVVPGLFAAGEVAGFGGGGYHGYNALEGTFLGGCLFSGRNAGRSRAIA
>gi|56695968|ref|YP_166322.1| glutamine amidotransferase [Ruegeria pomeroyi DSS-3]
MKRFLILQLRPETDAADAEFASILDKCGIGPERAHRIRLDCEDLPEGLDVTDYAGVIVGGGPGCVSDDPA
TKPATEARIEAAILGLMPQITGADHPFMGCCYGLGVLAAHLGGAVSKARYGEPVGPSTCTLTESGATDPL
TAGLPPVFEAYVGHKEAVQALPPGCTHLVASDPCPFQMIRWGENVYATQFHPEADAQDFEQRIQIYKDHG
YFPPEDAARLIELCHSAEVTAPGEILRRFAERYG
>gi|56695969|ref|YP_166323.1| hypothetical protein SPO1072 [Ruegeria pomeroyi DSS-3]
MAGHSKWANIQHRKGRQDAARSKLFSKFSKEITVAAKMGDPDPDKNPRLRLAIKEAKSQSMPKDNIERAI
KKAIGGDGDAYEEIRYEGYGPNGVAVIVEAMTDNRNRTASNVRSTFTKHGGNLGETGSVGFMFERKGEVV
YPASVGDADTVMMAAIEAGAEDVESSEEGHVIWCADTDLNEVSTALEAELGESDSTKLVWKPSTTTELDL
EAMQKLMKLVDALEDDDDVQRVTTNFEASDEVMAAL
>gi|56695970|ref|YP_166324.1| hypothetical protein SPO1073 [Ruegeria pomeroyi DSS-3]
MTLRKTIAAIAAAAGLFVAGIAHAEWAPKGNLTLQIGFGAGGSTDTIGRVVAKVMKEQTGWNVIAENKPG
GGGVAMFAGIANRPADGSVVGLGVNMPILVNLVNKPGDLGFDLDSFDYLGTAARAQLGLFARADAPFDDV
AGLIEYAKANGAAPLAFDAKPQELAMRQVMAKSGAEFQFLSTKGGAENLKLVLGGQAIAGFEAGEHLPFL
ESGEIKMIASMNNTRHNYAPDIPTLPEQGYDIYVDPVFFFAAGKGTPEDARMAITEALAAALDSEEVKTV
VMNSLKSPIENMGPEGTEKMLRDGLVNVGALFGK
>gi|56695971|ref|YP_166325.1| hypothetical protein SPO1074 [Ruegeria pomeroyi DSS-3]
MMQAKTSDRLLGLCLILLAVAFFVSIIPWQAQAADYGWLKPRTLPRILAVVLGLCGLALLIRPPGDVRPG
RFYWARAMLFAGVLVLGLAAMSWLGFVLVAPPMALVLMWLAHERRPLWLVLGAAGMPAAIWFTVAVLLDR
PLP
>gi|56695972|ref|YP_166326.1| hypothetical protein SPO1075 [Ruegeria pomeroyi DSS-3]
MPELSVILAGFGDALAPINLLFILFGVALGQFVGAVPGIGPVMATAIAIPFTFGMDPLTGIAFLVGVNKG
GLVGGAIPAVLLNTPGTPDAAATALDGYPLAKQGKPLKATKMALFSSITGDTFSDIVLITVSAPMAILAL
RMGPVEVLGLMLLAFAVIAGLMGQSLVKGVVAIALGLMAAMVGTDPEHGSPRLIFGNYELYDGLPLASVA
IGMLAISELLKRLSETRGTVRPAITLPRNQPRADRSVSWAEYWGCRFTMLRGAVIGTILGALPGIGSTAA
AFMSYASARQASKEPESFGKGSLHGIAASESANSSVMGANMIPMLTLGIPGSVSAALIISAFMIHGIQPG
PFLFSQQGQLVYGLFGAMIIANLINLWVGQLGLRFWVRVVSAPEPFIFASALLMCFVGVALASGGLFGIG
VMLVFALLAYVMSAFGISVVVFIIAFFLGPRLEISLSQTLALLNGQPQKLLDYPFALVLMALALVTAVAL
ARRRDTESETR
>gi|56695973|ref|YP_166327.1| TrkA domain-containing protein [Ruegeria pomeroyi DSS-3]
MTLDQILLFSLFAAVFALLLWGRFRYDLVAFSALLTGVVLGLVPVKDAFSGFGHPATIVVALVLVVSAGL
VRSGAVFLITRTLVDASRGLGAHIALMGGIGAVLSAFMNNVAALALLMPVDIQTARKAGRAAALTLMPLS
FATILGGMVTLIGTPPNIIIASIRAEALGEPYRMFDFAPVGGAAALAGLIFVALIGWRLIPTRGGGAAEA
AEALAEYIAELTVPEGSPHITKRLAELDAEAEKADVAILGLIRDGQRRYGRAANTILAAGDTLVIEATPE
ALDEFRAALSLDFSDKERQQALTAAGEGLDVIEVVVTDGARIAGRTAQGLGLSWRQNTVLMGISRQGTRI
TQHIRRTEVQPGDILLLLCPRDRGPDVTEWLGCLPLATRGLSVTANDKTWLAIGLFGAAVLAASVGLLYL
PVALGLVVVAYVLTGILPIAELYDHIEWPVVVLLGSMIPLGAALEASGGTQLIAGGLVTLTEGWPAWAIL
TVLMVVTMTLSDVLNNTATTIVAAPVGIQMANALGVSPDPFLMAVAVAASAAFLTPIGHKNNTLILGPGG
YHFGDYWRMGLPLELLIVAVTIPAILLFWPM
>gi|56695974|ref|YP_166328.1| nitroreductase family protein [Ruegeria pomeroyi DSS-3]
MFARDALSYAALPLPDRVEMSDDQMLAAAEAFHDTMRRRHTVRDYSDRPVPRAVIEACIRTAGTAPSGAN
HQPWQFVAVADPALKARIREEAEEEERRFYAGGAGDEWIKALEPIGTNAVKEHLTVAPWLIVVFAQRWGQ
FDDGTRYKNYYVPESVNIATGFLLAALHHAGLCALTHTPNPMRFLNDALGRPASEKPTMIIAVGHPTEEA
TVPEVAKIKKPLDQIASFAE
>gi|56695975|ref|YP_166329.1| chromosome replication initiation inhibitor protein [Ruegeria pomeroyi DSS-3]
MQFDPQQLAALAAILRLGSFEAAAGALSVTPSAVSQRIRALEEKVGLALIQRGPPATGTAAGLRLARHAE
DVGLLEAQVSRDLALDQGAGPVRVRIAVNADSLATWFLEAMTGVEDVLFDLVIDDQDHSADWLRRGEVAA
AITAHGKPVPGCDAHPLGALRYIATASPGFMQDWFAEGVTATALARAPCLTFSPKDRLQKAWIAAHVAEA
LTPPTHFLPSTHAFVDAALAGVGWGMNPESLIRQHVAQGNLHPLLPQAPLDVPLTWQVSRVLTPALAPLT
RAVRRAASRGLIAG
>gi|56695976|ref|YP_166330.1| L-lysine exporter, putative [Ruegeria pomeroyi DSS-3]
MSSAIVAGFALGFGLILAIGAQNAFVLRQGLRRQHVFAVCLTCALSDAVLIAAGVAGFGGLARAVPWFEP
LMRYGGAAFLIWYGARSLFAALTKTEALTTGEDARPGGGAALRPVLLTVLAFTWLNPHVYLDTVVLIGSI
SAQYPDRLGFGLGAVLSSFTFFFSLGYGARLMAPVFARPRAWQVLDTVIALTMWTIAAKLLLM
>gi|56695977|ref|YP_166331.1| hypothetical protein SPO1080 [Ruegeria pomeroyi DSS-3]
MFNPDMPLPQTADSRPLAGILWMLAAGLCFVVMTAMVKSMGQGMHPIQSAFLRYLLGIVFVLPALRSLLA
ARLTRRHWTMFGLRGAIHAVGVMLWFFAMTRIPLAEVTAMNYLTPIYVSLGAALFLGETLAARRITAIFV
ALIGAAIILRPGFREISPGHLAMLGTTLTLGGSYLLAKAAVADLSPAVVVAHLSIWVTVAMIPFAVAVWQ
TPSWQQLAVLFAIASFATAGHYFMTLALQAAPVAVTQPVTFLQLIWATLLGALVFGEGVDIWVVAGGTLI
LASVSFITWREAVLKRRPITPPSIAPKL
>gi|56695978|ref|YP_166332.1| hypothetical protein SPO1081 [Ruegeria pomeroyi DSS-3]
MPASRIGSGAKTGGRMTRAIAILCLLLAPGTAQAELEICNDTPVVQSVALAYRGGEDWNSQGWYVFEPDQ
CQTVLEGDLSNRYYYVTALAEGWVFDHQDIAFCVKQGVFDIVGAENCRDRGLITNLFREVDTGPRATGFR
LDLSPITRIGED
>gi|56695979|ref|YP_166333.1| transcriptional regulator BetI [Ruegeria pomeroyi DSS-3]
MGMPKIGMEPIRRDAIVKATIAELGVQKSLDVTVSQIAKRAGMSSALAHHYFGGKDQIFLAAMRHILSEF
GDEARAEMKGSTPADRPQAIVRACFAHSCFTPDVIAAWMTFYVLSQTNDDALRLWRIYQSRLYSNLVHAL
RPVVRNPGEVANDLRALIDGLYIQAALGAPGEPDLACAHALRVLDTLIEAGR
>gi|56695980|ref|YP_166334.1| choline sulfatase [Ruegeria pomeroyi DSS-3]
MTRPNILILMVDQLNGTLFPDGPADWLHAPNLKRLAARSTRFANAYTASPLCAPGRASFMSGQLPSRTGV
YDNAAEFRSDIPTYAHHLRRAGYYTCLSGKMHFVGPDQLHGFEERLTTDIYPADFGWTPDYRKPGERIDW
WYHNMGSVTGAGVAEITNQMEYDDEVAYHAKAKLYDLARGKDDRPWCVTVSFTHPHDPYVARRKYWDLYE
DCEHLLPQVGDLGYDNHDPHAKRIFDANDWRNFDITEEDIRKSRRAYFANISYLDDKLGEILEVLETTRQ
EAIILFVSDHGDMLGERGLWFKMNFYEGSARVPLMVAAPGMEPGRIDTPVSTIDVTPTLGELAGVDMAEI
APWTDGTSLVSLANGTERTAPVLMEYAAEASYAPLVSMRYGKWKYNRCALDPDQLFDLDADPHEMTNLAD
HPDHQGTVQSLRAKSQARWDLDRFDAEVRASQARRWVVYEALRQGGYYPWDYQPLQKASERYMRNHMNLD
NLEESQRFPRGE
>gi|56695981|ref|YP_166335.1| hypothetical protein SPO1084 [Ruegeria pomeroyi DSS-3]
MTTSEHIAALTALVETYVMAMTRGDRPALERIFFGKASEVGHYEGELLWNSRDAFIAMCEDAADAETDPF
WAISSVSVQGDIAMLHVENDWAGMRFDDFLTVLLHEGSWRIVSKVYRIR
>gi|56695982|ref|YP_166336.1| hypothetical protein SPO1085 [Ruegeria pomeroyi DSS-3]
MGRDKLTERFRTLHVPGNPLVMPNPWDIGSAKVMARLGAQALATTSSGYGFTLGLADGGQISRDIALQHA
ADICAAVDLPVNGDFENGFGDSPDTVAETVRLAAEAGLAGVSIEDTMMPSKEFYPFDLALARIEAAVAAA
RAAGIVLTARADGCMTGNYDQAEALRRCIAFARAGADVIYAPLVDADTTRALVATGTPVNLLAAGEMRDL
TTEQMGALGVARISIGGGLARVTQQILLDGTRAMLERGDFTLLKGAANVAEVEALLNG
>gi|56695983|ref|YP_166337.1| TetR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MRRKRIRDIRNDELVAAAIRSLHQRGFGSVTMAEIAGEAGASAASINYYFGSKDRLMEETMRRLLSILHA
ALLSRLAKAKTPRDRLLAIVEANFDDTLFTPAQCSVWVQFWANAPYTNSLSRLHRINRARVASNLRHELR
ALLPDPARSWVQTSIQAYMDGIWIEAAQADSVPDAAQARADACALTEMLLERG
>gi|56695984|ref|YP_166338.1| hypothetical protein SPO1087 [Ruegeria pomeroyi DSS-3]
MILNSILSIGLLLTFGLVAFCVIKWRDVECIGPTPVHLFTFIAILFTSGLDVGLIMFPLAEFGGYAEDPA
YAFANPLAIEFGFWGFLIWAFYFLTAFYFCVIEPRVGFFEIPLVKLVNNIVIIGTCAFTASLFLIYLPGY
IPEIGDGETVVPAFYVIVFLTILAAAYSSTDLKYVRVLSVGSTFLFLALILGMWAAAGMGLGGVGQNLGL
LGAYFGNLHEFVLPLTDYHAFYLFWWFAWSIMIGQFTSRFVGGLKTWQLLIALLVFPSIPLAIWFSVLYF
YHENGISTAGLTNVAMIVVGITFVINSLDSLIRLYTDNLSITVERLGRPVYIAGNVGVLFALTLLFQSQW
LQIQWVGSIVIGLYLACVLFIALRHRSTVMAIRTSPEDRALDFHKVESVH
>gi|56695985|ref|YP_166339.1| choline dehydrogenase [Ruegeria pomeroyi DSS-3]
MEADFVIVGAGSAGCAMAYRLSGAGASVLVIEHGGTDAGPFIQMPAALSYPMNMSRYDWGYLSEPEPHLN
NRRLVCPRGKVIGGSSSINGMVYVRGHAMDFDTWSEMGADGWAYADVLPYFKRMETWHDGGHGGDASWRG
TDGPLHVTRGPRTNPLFKAFVDAGKQAGYEVTGDYNGEKQEGFGPMEQTVWKGRRWSAANAYLKPALKRE
NCDILRGLAARVVMDAGRATGVEIIRGGKAEVIRARREVIIAASSINSPKLLMLSGIGPAAHLAEHGIAV
VADRPGVGANLQDHLELYIQQAAIQPVTLYKYWNLLGKAAIGAQWLFTKTGLGASNQFESAAFIRSQPGV
PYPDIQYHFLPIAVRYDGQAAAEGHGFQAHVGPMRSPSRGAVTLRSDRPEDAPVIRFNYMSHEKDWADFR
TCIRLTREIFGQDAFKPYAGKEIQPGAAVQSDEELNAFIAEHAESAYHPCGSCRMGRASDRNAVVDGQGR
VIGVEGLRVADSSIFPQITNGNLNAPSIMVGEKMSDHILGRDPLPRANDIPWINPRWEASQR
>gi|56695986|ref|YP_166340.1| hypothetical protein SPO1089 [Ruegeria pomeroyi DSS-3]
MSHTPHELAEEFPEKVDLMSQLKQSDAHFSKLADEYHEINRAVHRAETNVEPMEELAEVELRKKRAALKD
EIWGILSKV
>gi|56695987|ref|YP_166341.1| DNA-binding protein, putative [Ruegeria pomeroyi DSS-3]
MATQKLYAGAKLREIRNRLSLTQKDFAAKLGVSLPYLNQMENNNRPVSTSVVLALAQEFGLDVTELSTGD
SERLVSDMREALADPIFADAMPPLADLRLTASNAPALARAFIELHRTYRQTHERLASLDEALGREDARIQ
ASPWEEVRDFFHYCDNYIDAVDHAAERFAARAQTDGVRGAALAALADRGITVELADIEALRQYDPATRLL
RLSTRSAPQTQVFQLLLQVALLSQNSLLEATLDFARFHSEEARAIAKIGLANYFAGAALMPYGIFLEAAQ
QTRHDLERLSTRFGASIEQVAHRLSTLQRPGAKGIPFFFVRVDQAGTITKRHSATRLQFARFGGACPLWN
VHRAFETPGHFLRQLAETPDGVRYISLARDVSKTGGSFGAPVRRYAIGLGCEVRHADQLVYADNLDVSNA
SAYEPIGISCRICERKTCHQRSVPPLERRLTIDSDHRGTLPYEVN
>gi|56695988|ref|YP_166342.1| YCII-related domain-containing protein [Ruegeria pomeroyi DSS-3]
MLFCVTFQDNPGKEHLRQRHMAEHLAFLATQGAAIRGAGPLFEGAQGRGGMWLIEAGTRADVQALVEQDP
FWPTGLRKEVTILEWRQVFCDGQPL
>gi|56695989|ref|YP_166343.1| LysR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MNWDDMRYLLAVAQAGSLKGAARSLGVDKTTVSRRLRAMEAALGRPLVEPRGPGLGLTDFGQVLHRHAEV
MRDEMRAVDARIMADHAAPLGTVRLTSVPLIINHVLLPALSDLRAAAPGLRVELIAESRDLSLLRGEADI
ALRLARPTEGGQGVLARKLGDLDYAAYGARGAAGPMPWIGYEPRMGYLSHAAAIARAAEAEGGFAVAVND
AESLFQMVCAGHGRTLLPRAIADADARLVEVPFPHVALPRREVWLMVRRDLRELDRVRLAMEWVERAFAA
RMSQAQSTRPPDHRENGDNP
>gi|56695990|ref|YP_166344.1| Bcr/CflA subfamily drug resistance transporter [Ruegeria pomeroyi DSS-3]
MQSPPAPSHRSPPALATLILLSGLSALGMNIFLPSLPNMTEYFQTDYRLMQLSVALYLAVNAAMQVVIGP
LADKAGRRPVILWGLVLFLFVTLGCIYAPTVEVFLFFRMCQAVIAVAIVLSRAAVRDMYQQDEAASMLGW
VTMGMAVVPMIGPALGGVLDQYFGWQANFWILFVLGVAALILTYVDFGETALKSGKTLIQQFREYPALLT
SPRFWGYSLASGLSSGAFFAYLGGAPFVSTEVFGMEPARMGLFFGAPALGYFAGNFVSGAFSVRVGVDRM
VLWGCLMNALGVTLSLVTLLAGFGSEYSFFGFMTLVGLGNGMAIPNATAGALSVRPHLAGSASGLNGAIM
LGGGAALSAWAGALLSPETGAMPLLLLMLATALLGVVAIFSVIWRARRLGL
>gi|56695991|ref|YP_166345.1| propionyl-CoA carboxylase, beta subunit [Ruegeria pomeroyi DSS-3]
MKDILSELETRREAARLGGGQKRIDAQHARGKLTARERIELLLDEDSFEEFDMFVSHRCTDFGMEKQRPA
GDGVVTGWGTINGRMVYVFSQDFTVFGGSLSETHAQKICKIMDMAVQNGAPVIGINDSGGARIQEGVASL
AGYAEVFQRNIMASGVVPQISVIMGPCAGGAVYSPAMTDFIFMVKDTSYMFVTGPDVVKTVTNEVVTAEE
LGGASTHTRKSSVADGAFENDVEALAEVRRLVDFLPLNNREKPPVRPFFDEPGRIEASLDTLVPENANTP
YDMKELINKIADEGDFYEIQEDFAKNIITGFIRLEGQTVGVVANQPMILAGCLDIDSSRKAARFVRFCDC
FEIPILTLVDVPGFLPGTSQEYGGVIKHGAKLLFAYGEATVPKVTVITRKAYGGAYDVMASKHLRGDFNY
AWPTAEIAVMGAKGATEIIHRADLGDADKIAAHTKDYEGRFANPFVAAERGFIDEVIQPRSTRKRVSRAF
ASLRGKSLKNPWKKHDNIPL
>gi|56695992|ref|YP_166346.1| hypothetical protein SPO1095 [Ruegeria pomeroyi DSS-3]
MACRTWHITRADGKLQLSRRLPASFDVAAETVLPAADPLRLAHQIRQDMWRKLQSLCGFSPVVEITAEGQ
GLRVRAGAHVIRAVPGMESPGAWHSHDLDFQMVYVTKGWVVFEYEGQGEHLLRAGSCVLQPPGIKHRECR
HSDDMELIEIISPAAFETRDETAP
>gi|56695993|ref|YP_166347.1| putative lipoprotein [Ruegeria pomeroyi DSS-3]
MSKCIKFVAMVAFVGAVAACDNSPKEEFVIVEPISTEPVFTGKYK
>gi|56695994|ref|YP_166348.1| hypothetical protein SPO1097 [Ruegeria pomeroyi DSS-3]
MLKHRGFPSRMPGSDFQFTIRRANPKGVTPLTRRERYRDRKAVDRRADALFMQALWEQFGDQPFERGNLD
AGRLSWLFGREVVAAEDPFDPASYEALLVIDVAVARASFPDAFDGDDWE
>gi|56695995|ref|YP_166349.1| hypothetical protein SPO1098 [Ruegeria pomeroyi DSS-3]
MVRRLDAISALALMAALGAASTATAGDAGSQAELDALRARVEALEAGRAAGANGDLNIGRTAIDIYGYAK
ADFFYDFDFVQGDTAFVNNIGEPANATDGTFGATVRQSRLGIRTSTETDIGTLGGQLEFDLFASGGRSEL
RLRHANIRIGDHWLIGQTWTNFMPIGHYPTSVEFNGPVGVTFARVPQVRYTHAFGKAVFSASIEENSARS
DDPVVTAALEYNDDLFSARIAGLVGTVISGGTEVDQTGVTVSGALRPWHGGLFQATFVTGEALGPLLIGG
GASAVGGVANDVDGFTVEFRQDVGEKWNFGIAYGNEEYDLGTSTGTLDFTELESIHVNAFYKPTDNLTLG
AEYIFGERTTSTGASFEGDRVQLAVQLNF
>gi|56695996|ref|YP_166350.1| hypothetical protein SPO1099 [Ruegeria pomeroyi DSS-3]
MMSLTSNRPSFYPRPARVDRRISPKLRGPPLRLSRRVRAA
>gi|56695997|ref|YP_166351.1| putative lipoprotein [Ruegeria pomeroyi DSS-3]
MQKSKLFAGLALVASLAACGDNPTEQALYGGSAGLLGSLVLDGNPVVGAAAGAAGNMLYCKVQGTCN
>gi|56695998|ref|YP_166352.1| propionyl-CoA carboxylase, alpha subunit [Ruegeria pomeroyi DSS-3]
MFNKILIANRGEIACRVIKTARKMGISTVAIYSDADKQALHVQMADEAVHIGPPPANQSYIVIDKVMAAI
RATGAQAVHPGYGFLSENSKFAEALEAEGVIFVGPPKGAIEAMGDKITSKKIAQEANVSTVPGYMGLIED
ADEAVKISNQIGYPVMIKASAGGGGKGMRIAWNDQEAREGFQSSKNEAANSFGDDRIFIEKFVTQPRHIE
IQVLCDSHGNGIYLGERECSIQRRNQKVVEEAPSPFLDEATRRAMGEQAVALAKAVGYASAGTVEFIVDG
QKNFYFLEMNTRLQVEHPVTELITGVDLVEQMIRVAAGEPLSITQGDVKLTGWAIENRLYAEDPYRGFLP
SIGRLTRYRPPAETAAGPLLVNGKWQGDAPSGEAAVRNDTGVYEGGEISMYYDPMIAKLCTWAPTRAAAI
EAMRIALDSFEVEGIGHNLPFLSAVMDHPKFISGDMTTAFIAEEYPEGFEGVNLPETDLRRVAAAAAAMH
RVAEIRRTRVSGRMDNHERRVGTEWVVTLQGADFPVTIAADHDGSTVSFDDGSSMRVTSDWTPGDQLANL
MVDGAPLVLKVGKISGGFRIRTRGADLKVHVRTPRQAELARLMPEKLPPDTSKMLLCPMPGLIVKVDVEV
GQEVQEGQALCTIEAMKMENILRAEKKGVVAKINASAGNSLAVDDVIMEFE
>gi|56695999|ref|YP_166353.1| putative lipoprotein [Ruegeria pomeroyi DSS-3]
MFGARTYPRASRPLAVLALIGLAACALDREAEVRAQLGGWMPLGDTLYFESKLECTAGVFATPADILQTK
VRTVSTLRDGLAALSREAIVAFDLEGETPDQVSQAVMSADLPKGLGILASGLSARACMDEATKSAYLSAL
HSPAALLIFAPDNNALVILDRDRRQVFFARGDV
>gi|56696000|ref|YP_166354.1| hypothetical protein SPO1103 [Ruegeria pomeroyi DSS-3]
MGAGMYLHSHAQPLTKPLTLNFLHPAPSQVVAIGAATVILKRTGDHMKPLFAFVFLAFLPLAGWAADATQ
PEQDALIRPAGDSDLSEFLWIKRPIVIFADTEADPRFQQQIEMLRAGAAMLEERDVVVLTDTDPAARAPA
RQKLRPRGFALVLIDKDGGVKLRKPTPWSVRELTRSIDKMPTREQEIRDRRGLD
>gi|56696001|ref|YP_166355.1| hypothetical protein SPO1104 [Ruegeria pomeroyi DSS-3]
MGMTVKVHSRSHRVLRARKKGCAMDVILHIGAHRCATTTFQHYLRQNADRLAADGTGFWGPRRTRNGLFR
GLLPTPGPATGRDLRRRAVGRVRLNLARTALGGTRRLVVSDENMLGSMRQNLRQAELYPDAGERIARYGE
AFDGKISDVVLNIRSPELWWSSALGYGLTRGFGLPGEVALDWIAQSRRSWRDVIADIGCALPGARLWVLP
FEIFAGRPEAQLEAVTGRPAPHEHSRDWLNATPRLPELREILPPRLAEALPGGEGRWTPFAPDQAAALRE
AYADDLMWLAAGADGLAWLMDDPNKKPAGQTLPRPELTRGRRNEQDRRLAGAG
>gi|56696002|ref|YP_166356.1| methylmalonyl-CoA mutase [Ruegeria pomeroyi DSS-3]
MSKTDDWRALAEKELRGRPVEDLTWQTLEGIDVKPLYTDADTAELPHMGGMPGFGPFTRGVKATMYAGRP
WTIRQYAGFSTAEESNAFYRRNLAAGQQGVSVAFDLATHRGYDSDHPRVVGDVGKAGVAIDSVEDMKILF
DGIPLDKVSVSMTMNGAVIPILASFIVAGEEQGHDRSVLSGTIQNDILKEFMVRNTYIYPPEPSMRIISD
IIGYTSDNMPKFNSISISGYHMQEAGANLVQELAYTLADGREYVRAAIEAGMDVDKFAGRLSFFFAIGMN
FFMEIAKLRAARTLWHRIMTEFGAKSERSKMLRTHCQTSGVSLQEQDPYNNVIRTAYEAMSAVLGGTQSL
HTNALDEAIALPTDFSARIARNTQLVLQEETGVTKVVDPLAGSYYVESLTNDLIEKAWALIQEVEEMGGM
TKAVASGMPKLRIEESAARRQAMIDRGEEVIVGVNKYRKDKEDPIDILDVDNMAVRDAQIARLERIRASR
DEAACAAALDELTRRAKEGGNLLEAAVEAARARASVGEISMAMEKEFGRHRAEVKTLAGVYGAAYEGDEG
FAAIQKSIEAFAEEEGRRPRLLVVKMGQDGHDRGAKVIATAFADIGFDVDVGPLFQTPAEAAQDAIDNDV
HVVGISSQAAGHKTLAPQLVEELRKAGAGDIIVICGGVIPQQDYQFLYDHGVKAIFGPGTNIPEAAQDIL
KLVRDARAG
>gi|56696003|ref|YP_166357.1| hypothetical protein SPO1106 [Ruegeria pomeroyi DSS-3]
MACRFFAVSLCFGRRTVMELDHFAVAGETLEAARAHVEAALGVAMQPGGQHARFGTHNTLLGLADGLYLE
AIAIDPGAPGPERPRWFDLDRFSGPARLSNWICRVPDLQAALSAAPAGAGDIVDLERGALSWRMAVPASG
VLPYDDRFPALIQWQGDLHPAAMLAPSGCALRWLVVTHPEARALAELCGPLERVVFETGPSGLRAEIDTP
HGMRVLA
>gi|56696004|ref|YP_166358.1| phosphinothricin N-acetyltransferase, putative [Ruegeria pomeroyi DSS-3]
MKIRPARALDAADIAGIANHYIRDTLVTFTTELRRPEAVAGDIAARAPAYLVAEAAGAILGFATYGPFRA
GPGYACTREHSILLDPGARGQGAGRALMTELERVARAEGVHVLVAGISGANPGAVAFHRALGFAEVGRLP
QVGRKEGRWLDLVLMQKILDADPN
>gi|56696005|ref|YP_166359.1| DnaJ-like protein DjlA, putative [Ruegeria pomeroyi DSS-3]
MSLWTRITDALSALAQGESLSAVFERLRTPPEKSVAFAIAVIALGAKMAKADGRVTRDEVTAFREVFQIA
RADEAGAARVFDMARTDVAGYQDYARKIKGMFAEDSTVLCDLMEGLFHIAMADGFYHPGENEFLEEVAQI
FGQTDRQFHALRARFVPDAPKDPYTVLGVSPDMPMPEIRKVWRNLVRETHPDAMMARGVPEEAIRLAEKK
MIDINRAWDELNGARV
>gi|56696006|ref|YP_166360.1| endonuclease/exonuclease/phosphatase family protein [Ruegeria pomeroyi DSS-3]
MRLATWNIEWFANLFDRNDRLLVDDRWSGRHDVTRAQQVEAIAKVLTALDADAVLIVEAPNTGRTQNTVR
ALGAFAEAFDLRTHAAVMGFANETHQELALLYDPARLEARHDPLGEETGKRGSATPPRFDGTYRIDLDID
ATEDLVRFSKPPLELEVTTATGTRFRMIGAHLKSKAPHGAGSRDEAIRISILNRRKQLAQAIWLRERVED
HLTRGDEVVLLGDLNDGPGLDEFEHLFGRSSVEILLEAGLYDPHADKARQVRPGPLPATARFQLPGEGRY
LSALLDYVMISKGLMARRPAWRIWHPFDDAECWQMVELREALLTASDHFPVTLDIDI
>gi|56696007|ref|YP_166361.1| LysR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MARINLEQLSTFLAVVRLGGVRRAATSLNLTQPAVTARIKNLEDNLDCELFDRTQSGMKLTKRGELLLGH
AEKYEHLTQLVERDLVDPAGVEGRLRLGASETIAQCWLPDLVTRLHQLFPKLEIELVVDISANLRAGLMD
RELDLAILLGPLSEFSVNNVELPDFELAWYAAADTSSEAIAASYLSRPVLTYPRNTRPYRELKEKLFEQA
GPNFSLFPSSSLSACFRLVEADLGVAVLPRALGREYVLAGRIREFDPGWVPAPLRFTICYMGEPKSQLIE
TAAHMAREVAVDYHGDKNNL
>gi|56696008|ref|YP_166362.1| hypothetical protein SPO1111 [Ruegeria pomeroyi DSS-3]
MSVGYDRLKTSSLAELRAAIRSGAYRSHTAGLGQGYLQANLAILPEAYALDFMRYCQRNPKPCPLIGVSD
TGNPMMFTLGRDIDIRTDVPAYNVYRDGRLDSVSADITEDWRDDLVVFALGCSFTFEHAVMRAGVALWHV
DNDRTVPMFRSNIETVPAGPFSGKMVVSMRAVPEDRVAEVAEISRAYPLAHGAPVYWGDPAGLGIADIMS
PDWGDPAPLGPGEVPMFWACGVTPQVAIEAARLPLCITHKPGHMLITDVAEDAEVPVVETAQDKR
>gi|56696009|ref|YP_166363.1| TRAP transporter, periplasmic protein [Ruegeria pomeroyi DSS-3]
MKRVMFSLAASTALAAPVAAEDLSVVGSWSSLPLHKQYEAPFWSETLPAASGGKINVSLTTHNQMNLGVG
DVFRLLGDGVYDVAMTVADYAVADAPELEGLDVPLLALTADEARAMVDAARPMVEDIYNARFNSHVLAIA
PYPPQVVFCNAEIAGLDDLNGLKVRASGRMTAKFLEALGAEGVNVSFGEVPGALQKGTVDCAVTGAGSGY
SAGWWEVSTHLLPIPLGGWDSVVTAINLDKWNSLDAETQALISTQVTTAFEAPAWASAQDALVNDIACLT
GNGTCPAGDARGMTLVEVSEADFARARDVLVSQVLPDWAERAGGDWAERWNASVGATVGVAIGTN
>gi|56696010|ref|YP_166364.1| TRAP transporter, transmembrane protein, putative [Ruegeria pomeroyi DSS-3]
MTGLRKWNRWIAILTGAILLVCAGIVLLDIVLRRMGSSLGGTDEISGYVMAIATSWGMGFTLLELGHVRI
DILRGRAGQIGRAVFDLFAMSVLAGTVTLIAVKCLPVLSRSLANSSRANTPLETPLAWVQLPWLAGWIWF
ALVAWATLVAALKLVLKGRFQHAEAAIGAFGEEETRT
>gi|56696011|ref|YP_166365.1| TRAP dicarboxylate transporter, DctM subunit [Ruegeria pomeroyi DSS-3]
MIGYVTVGLLGLLAMSIPVGIVLFLLGFGVDAFFSPFPLIRGLGNLVWSTSNNATLIAIPFFVLLGEILV
RSGIATRTYAALDRWVSWLPGGLVHANIATATMFSATSGSSVATAATVATVAMPQAEKLGYDPKLFSGAI
AAGGTLGIMIPPSINLIVYGFLTQTSIPRLFLAGLLPGLALALGFMLITVIICLIRPALGGTRRVFSGGE
MLRALLQLVPIVLLFTIIIGTIYKGWATPTEAAAVGVAGAILIAGFFGGISVQMFIDSILGTVKITSMIM
LVVIGASFLNFTLASAGLGRELESFLGGLGLSPLGTILVVVVIYIVLGFFIETLSLMVVTIPIIVPLVVA
QGYDPIWFGILMIVLIEMALITPPVGLNLYVVQGARQSGKMSEVMLGTIPYVIAMLVMVAALIAFPAIAL
FLPSALGG
>gi|56696012|ref|YP_166366.1| hypothetical protein SPO1115 [Ruegeria pomeroyi DSS-3]
MKFTAAGTQIDVDIADLVIAGWTGRNADAVQHHIDELARLGVQPPSQVPLFYRVSSTLLVQAPEIEVLGT
ATSGEIEPLLINHEGTVWLGLGSDHTDREAEALSVAGSKQACPKPVSDMLWRFDEVAARLDTLILRCHVE
EGGAWVLYQEGPLAQIRPLPELVAQSGLGAGGAMLCGTLPAIGTVRPATAYRMELVDAAANRSQRLEYRV
RTLPIIK
>gi|56696013|ref|YP_166367.1| hypothetical protein SPO1116 [Ruegeria pomeroyi DSS-3]
MSRSAHELAVFGGTILHAILASLATNKARIIALPSAALFGLVLFLFWGSIDAAVQDRWNVTPGKFALYFA
NCKILSRDAADCAQTRSRIAGDFVDSKDKEQDTRFDELERQLASVIKQQEQSNDQIAQLSLRTIELAQQL
ALASEAGDNARVAELTESIAEVGAELELANLNAADIQTSIAALSSSLSGALRSDARVLSFEVSPEVGTLA
PNLVAPDSSVASREKPFVEAFIDGPKSRGSSSHLMSPEVESYIQPNGTWTLPPSSPRSVVVTSTSAIGSG
VQTEFVDADVEEIISNVFEKVGLEPRADEFSKAIPELAPLPNPEGAFAMMQGQLAPPVFEVPKAPSIVSP
SPSDLAGLDVQQTISYAFERVDQDALATRLEPWVPDTFPDPSFDTARFIDRVDSPKPTQPWDKNWDFKAN
PRLTAETQLVLKSLGYDPGVIDGRWGPNTQAAWDKAQSELGLSTTKYPTEFVIHDLRGRIPAIDAGQVDG
FIAANHSRVSRHSRPDLLGADAGYGTARDTYATQSRVGGTNSSQIASHENGIQMPNNWSSISTTTMNCTN
CTDMTGTIGSYEQSDIIGTRSIEHSYEPYSYENNMVLGNSGFGQSDLIVRHQDFMNSFQSPTIDIPSFSV
PSVSIPSFSMD
>gi|56696014|ref|YP_166368.1| Ppx/GppA family phosphatase [Ruegeria pomeroyi DSS-3]
MNLQTETSVPDWGPFGRPLFDDPGARALSRIGVVDVGSNSVRMVVFDGAARSPAYFYNEKVMCALGAGLS
ETGRLNPEGRVRALAALRRFQHLADDLDLPPLRVVATAAVREAEDGAEFCAEVKRQTGLTIQVIDGEEEA
RLSAQGVLLGWPGAYGLICDIGGASMELAEIGSGQVGRRLTSPLGPLKLRDVPGGRRGRKAHIKQVMSEL
RAQLGPQRDRLFLVGGSWRAIARIDMLRRNYPLKVLHEYRMTVRDVHETARYIERTDLDKLRGKAGVSAS
RMALVPFAIDVLARLIREFKPKDIAISSYGIREGLLYEQMPQRLRDRDPLIEACYFAESKDARLPGFGKQ
LFEFVMPLFKSAPRARVRLIKAACLLHDVSWRAHPDYRAEVCFDNVTRANLGGLKHSERVFIGLALQHRY
RNKREGNRFEPIYDLLDEKSQTQAEILGKAMRFGAMLWLKRDARMGRLTWFPKKRRLELHLPQEAAPLFS
EVAEARFQSLVGALDATSEIFIEE
>gi|56696015|ref|YP_166369.1| hypothetical protein SPO1118 [Ruegeria pomeroyi DSS-3]
MARQLSFDLPAMTALGREDFFVSPANALAVAMISARIWPGGKLVLTGPAGAGKTHLAHVWASETGARIIE
ATALVEADIPELAAGPVAVEDVPLLAGDDARQALLFHLHNLTLANGHPLLLTGRAAPGFWDLSLPDLQSR
VDAAQHVALDPPDDALLGAVLAKLFVDRQLSPGPEVISYLVKHMDRSFEAAARTVAALDRIALDEKRDIT
RALAVRLLSTQAGAA
>gi|56696016|ref|YP_166370.1| membrane protein [Ruegeria pomeroyi DSS-3]
MALPVKDQLRYWGLAAAVFVAVLYLLGDVLLPFVIGGAIAYFVDPVADRLERWGLSRAAATAVITIASVL
LFVLMVLMVVPALITQMIDLINVLPQLFQDLRTFVSTHFPSVLDRESNAHQMIASVIETLKSRSGDLLQT
LAGSVGSAINVVLLLVIVPVVSVYLLLDWDRMIARIDQLLPLDHAPVIRRLAGEIDAVLASFVRGMGTVC
LILGTYYAVALMIVGLQFGLVVGLIAGLVTFIPYLGALIGGALAIGLALFQFWGDWLSIGLVAAIFALGQ
VVEGNLLTPKLVGSSVGLHPVWLLLALSVFGALFGFVGMLIAVPVAAALGVLARFGTGQYLGSRLYRGLT
VQDDD
>gi|56696017|ref|YP_166371.1| hypothetical protein SPO1120 [Ruegeria pomeroyi DSS-3]
MLDLLNRMAEATETETVWTLLVDALAPFGFERVNYGLTRGLSGASIGDPHDVYIRSTHSPDRVRAHHETG
HYLRTAEYRWVLENVGAVSWGWVARERAAGRLSDSECAAMDALQARRRRAGISISFAEGGRRYKGAMGLA
AHTHESQEALDARWPEISARVLAICNMAHLKFSQLPLPVRSACLNQRQRELLEWVADGKTMQDIQVLTGL
SVSAIEKHLRKARDALGVETSAQAVAKAAFLNLIFVASDAS
>gi|56696018|ref|YP_166372.1| prolyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
MRLSRYFLPVLKENPAEAQIVSHRLMLRAGMIKQAQAGIYSWLPLGFKVLRKLENIVHEEQIRAGHIPML
MPTLQSADLWRESGRYDDYGQEMLRITDRHGRDMLFGPTNEELITDIFRGHVSSYKDLPLTLYHIQWKFR
DEIRPRFGVMRGREFLMKDGYNFDLTKEDALHAYNRHLVSYIRTYERMGLQAIPMRADSGPIGGDDTHEF
LVLAETGESEVFYDSKVTDIRLGEREIDYDSVDQCRAVMEEFTSLYARTDETHDEAVFNQIPEERRRSAR
GIEVGQIFYFGTKYSEPMGATVQGPDGKPVPVHMGSHGIGVSRLIGAIIEASHDDKGIIWPEGVTPFHCG
IVNLKQGDGEADAACDQLYAALSAIGLEPLYDDRNERAGGKFATMDLIGLPWRITVGPRGLKNGVVELTS
RKTGESVELSPEEAVKKVADIYAPHHPHLSREEPMAGRSFHTWL
>gi|56696019|ref|YP_166373.1| hypothetical protein SPO1122 [Ruegeria pomeroyi DSS-3]
MIMTMTRPMSPSTKTAPQPASFDCETAALLRAVMLPLFHGAQTWAELIEAMQRRGYGLAFRDGAFCVIER
AGGQRLCGLRFLGLAMEDLVTRMGRPCVLARPGTWADGDLLSHPPTRSAVH
>gi|56696020|ref|YP_166374.1| lipoprotein releasing system transmembrane protein LolE [Ruegeria pomeroyi DSS-3]
MTPPRGQRTLRAKPEQEPQMARQPAPFAPFEWKIAWRYLRARRAEGGVSVMTWISLIGITLAVFALIATL
AVRSGFRSDFVGTILGANAHVTVYNPGEYRENGQIDRTIPNYAEMAARVAEVAGVTRAAPLVKGQVMAAA
QNRNAGVEVFGIATGDLAALPGITNSDRSYGDLSRFDQGIALGSGVARELGVTVGDRIKLISPNGARTPM
GTSPRVNAYEVVYVFSAGRYDIDRTRVYMPFGEAQAYFNREGVADEIEVMVSEPERLDRVLIPILSAAGD
GAQVWTWQDASGGFLRALEVEDNVMFIILSILVLIATMNIVSGLIMLVKNKGRDIGILRTIGLSEGSILR
VFFICGAFTGILGTLMGVALGCLFAIYIDPIFSFVNFVMGGGVWDPAIRGIYALPAELRLGDVLKAAGLS
LGLSCIVTYFPARRAARLNPVEALRYE
>gi|56696021|ref|YP_166375.1| lipoprotein releasing system ATP-binding protein [Ruegeria pomeroyi DSS-3]
MSEPTLRLSGIEKTYLSGTPGEVRVLRGVDLSVEPGEMVALVAPSGAGKSTLLHISGLLDVPDAGRVEIA
GQDMTGRGDRARTGVRRRDVGFVYQFHHLLPEFTALENVVLPQLANGIGEGEARARARALLSRVGVEGRA
GHRPAALSGGEQQRVAFCRALANAPRLLLADEPTGNLDPATSDQVFDALVELVRGTGLSALIATHNLELA
ARMDRVVRLSDGRLSAES
>gi|56696022|ref|YP_166376.1| hypothetical protein SPO1125 [Ruegeria pomeroyi DSS-3]
MIWIMAGVDGVGQAGCEDHNREIVMYRLVPALLLLAACAPAAPDGAQLYARHCAACHGATGAGDGPEAAR
LPVPPADLRNLAASNGGQFPTGAVMATIHGYPGKSHLGAMPEFSALLGGETVAVTTTDGRVIAAPRALVE
LAVHVETLQTP
>gi|56696023|ref|YP_166377.1| cytochrome c family protein [Ruegeria pomeroyi DSS-3]
MKPIIPALLALGLATPAPAQDAAEGEQLYRHHCATCHGIEATGHGPMAGVLVISPADLTTLSEGGELPIA
RIVQRIDGRDPLVSHGSPMPIYGPYFEGRDVAIKAETGQPILTSQPIVDLLAYIATLQKN
>gi|56696024|ref|YP_166378.1| cytochrome c family protein [Ruegeria pomeroyi DSS-3]
MRAMSATVLILGLIAACTRTDIMPGPAEGEQVFAANCVACHDYRGQGADLSGGGEAPDLTRIAARRDGAF
PRAEILTKIDGYGRGKVSAEIMPAFGALLEGELVPVEIDGVMTPTPRPLAALLSYLESIQVAEAG
>gi|56696025|ref|YP_166379.1| hypothetical protein SPO1128 [Ruegeria pomeroyi DSS-3]
MASVRDRDGWRGRCPLTPARGGTVQGRSSSFPNRKRPARMILRLFCLLLLVAACGRPLTEAERAFATRLH
GDALDISRVRLVEGAPVGAVTFHRKPRPRVTCRERILPPQKEEIVTVKPAAVTLFHKVYFARDWYLDDYM
PDYPDRVNLIAAMLLAHELTHVWQWQNRRVTGYHPLRAAAEHGASDDPYLFDLREAPDFLSYGYEQQGAI
VEEYVCCRALAPEAPRTRRLHDMLAAVMPVTALPQSRRESDVLLPWRDAELTGICD
>gi|56696026|ref|YP_166380.1| hypothetical protein SPO1129 [Ruegeria pomeroyi DSS-3]
MHHFDEILGLAAARHGGEAALEAKLTRPKSPAELTAMPEDRWLSVITKCVFQAGFNWKVIEAKWDGFEAA
FDGFDIGRCALMDDEKFDALLQDARIVRNGTKIATVRDNAAFLLELRDEGGAGQVLGGWPSSDYVGLLDL
LKRRGSRLGGTTAQYAMRFAGRDSFILSRDVIARLIAEGVVDKAPASKKAMAQVQAAFNTWMEQSGRSLS
EISRVLAMSL
>gi|56696027|ref|YP_166381.1| thioesterase family protein [Ruegeria pomeroyi DSS-3]
MLTPDTAQTLLSEHFAEWVQALAPEVLAIDREHALVRMPLGPHLARTGGIVSGQALAALADTSMVLAAIA
QEDALRLFATTDLHTQFLRPGVGRAILCRAQVVRAGKALVFTRADMHEEDSGKLVATATATFYAP
>gi|56696028|ref|YP_166382.1| glycine betaine/proline ABC transporter, periplasmic substrate-binding protein [Ruegeria pomeroyi DSS-3]
MTVLRNRRIVHPIGSTGRTEMKRVGLGLALVALAGGVNAAEMGASDEPIKLAINEWTGQHVTTHVAGEML
RAAGYKVEYVTAGMMNQFQALADGDIHATLEIWSSNVSDEYAKKVAEGTVTEIGDLGLNAREGIAYPAHV
ADLCPGLPAWEALKDCAQVFASAETLPMGRLVDYPADWGTPGADRMTGLDLPIKAVPAGSEGALIAELRA
STERKSPLLITFWQPHWAMSAYDVKFIDLPPGEEACFNDASWGPNPNAVNDCDFSPSRIFKASWSGFAEK
WPAAHEILSNYQLSVEAQQPMMGAIDVDGGKVEEVVAAWMTENEGSWRPVVDAATK
>gi|56696029|ref|YP_166383.1| glycine betaine/proline ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MTEATTPAITCQNLWQVFGPGANDALAEALARSGGDAEAAAAELRDKGLIPAVQDASFEVREGELFVIMG
LSGSGKSTLIRCISQLLPGTGGEIRIEGDNVVGASKKRLTELRRRKLGMVFQHFGLFPHMTVAENVAYPL
KVQGVGRKERRARAQEVISLVGLEGREDSFPRQLSGGQRQRVGIARSLAVNPDIWFLDEPFSALDPLIRR
QLQDEFLRIQATLKKSIVFITHDIAEALKLADRIAIMRDGKIVQIGTPTEIVLNPVDDYVREFSKDVAKG
RHAKVASVMRAGVEEQGPDDPGLTAGMTLDTALARCMQLYQPVPVRDASGAIVGTVQPSDLAAALQVDDT
>gi|56696030|ref|YP_166384.1| glycine betaine/proline ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MSAADISVPRVARLTVGTWAALITALVGALCLALEPVAPWLGAWPKAWVLPATDWVGTVMTAFLAWFKPV
ARLFSAVMVYPMDAANWVLNATPWPLVIGIVTALGWYLGGAAMAALGLGGLGFVLASGYWHEGMNTLALV
AVSVPLALLVGGAIGILANEVPRIRGAVQAVLDIMQTVPTFAYLTPLLALFGFGPVVGLIASAIYAAPPM
ARNVMLGLERVEAEVKEAAIMSGGTRMQQLFQVEIPSASRQIMVGFNQCLMAALSMVIIAAVIGGFNDIG
WEVLLTMRKAQFGAALLAGMVIVAFAVIIDRMSAVLATERKRHDIRVVWALLGLALAFTLVFWTRLPAAS
DLTLLDPVAVSLDQGLTRFTQANGAALDALKNNTLYYVLLPLRIGLDQAVLPFTWGFSWTPQMSSALFAL
GAVLALGMAWAGRASAGLMILIGFGMIETGITNLPWPFVLTGAAALGYVAGGRRLALMVVILLGTILVSG
LWDRALLSLYLCGASVFACAVLGGAIGVASAVWTPVWRVVRPICDMLQTIPLFVFLIPVLMVFQIGEFSA
FLAICAYAIVPMIRYTRHGLVDTPDEMMEAAISSGATDWQILRDVRAPYAAPTILLGLNQTILYAFSMLV
IAALIGTTGLGQSIYLALGQADVGLGISAGAAMAILALIADRLVQGFAEERRKALGL
>gi|56696031|ref|YP_166385.1| NnrU family protein [Ruegeria pomeroyi DSS-3]
MMGGWAEFVAALAVFLLSHVIPVRPPVRPWLVARLGARGFGIAYSLFSIAVLGWLILAAARAPYVEVIPP
LPALRWVPILIMLPVCLLAVAGLRAVNPLSFGGLGRGVFDPTRPGILALSRHPLLLALALWSGAHLLANG
SLAHVILFGLFAGFAVMGMALIDRRKRRELGADWARLAAGTARLSPRGLPALLAPRVLWPAALLYLALLL
AHAPVIGVSPLP
>gi|56696032|ref|YP_166386.1| hypothetical protein SPO1135 [Ruegeria pomeroyi DSS-3]
MTDRERRTQPMHLAYVTTTARGATDRLLSEVATRLDAKGVRLAGVVQTNTECADNARCDMDLRVMPGPEV
IRISQTLGTGSRGCRLDPGELERAVGLVSAALAEDPELLIVNKFGKHEADGRGFRPLIAEALARDIPVLL
GVNGLNEERFLAFTEGAAVKLSPEPDALVDWVEKVRASRIQAA
>gi|56696033|ref|YP_166387.1| hypothetical protein SPO1136 [Ruegeria pomeroyi DSS-3]
MLKNDQLDQWDRENFFHPSTHLAQHARGDSANRVIKTASGVFIEDRDGNKLLDAFAGLYCVNVGYGRQEI
ADAIADQARELAYYHSYVGHGTEASITLAKMILDRAPANMSKVYFGLGGSDANETNVKLIWYYNNILGRP
EKKKIISRWRGYHGSGLVTGSLTGLELFHKKFDLPVNQVIHTEAPYYFRRADPDQSEAQFVAHCAAELEA
LIEREGADTIAAFIGEPVLGTGGIVPPPAGYWEAIQAVLRKHDILLIADEVVTGFGRLGTMFGSDHYGIE
ADIITIAKGLTSAYAPLSGSIISDKVWKVLEQGTDENGPIGHGWTYSAHPIGAAAGVANLKLIDRLNLVQ
NAGETGAYLNATMTEALAGHPNVGEVRGAGMLCAVEFVKDKDSRLFFDAADKIGPQISAKLLEQDKVIAR
AMPQGDILGFAPPFCLSRAEADQVVDATLRAVRTVLG
>gi|56696034|ref|YP_166388.1| succinate-semialdehyde dehydrogenase [Ruegeria pomeroyi DSS-3]
MTETALSARADIADKALVRSFSYINGKWCAAANGETFAVTDPADGTELGHAASLSAEESSAAVDAAQAAF
PAWAGRLPQERAALLRRWYELLLEHKEDLARIMVLEQGKPLSEARGEIDYGAAFVEFYAEEAKRPNIEGV
TSHLPDAEVELWREPVGVAALITPWNFPSAMLTRKAAAALAAGCTVVAHPSRETPFSALALAELAERAGV
PPGVFNVVTGTAATVVEPWTRDTRVRALSFTGSTEIGKLLYRQSADTVKRLVMELGGHAPVIVFKDCDLD
KAVSETIKAKFATSGQDCLGANRILVERPVYADFCARFTLAAQALTLGPGMADCDLGPLMNEQAVQKQED
HVADALARGARLACGGRRHPRGPLFYEPTVLVDVPPDALIMSQETFGPVAAIAPFDTEEEAVARANDSEY
GLVAYVHSNDPRRIYRLSRALQYGMVAVNRTKVTGAPIPFGGTKQSGLGREGARLGMEAFTEVKYICRDW
A
>gi|56696035|ref|YP_166389.1| AsnC family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MQLDQRDLDILRVLSTEGRITKAALADRIGLSPTPCWDRLKKLEQAGLIEGYGARINLKKLAPHVTVFVA
AEIADHTAASFRAFEAAMQRYEEVTACWALGGGFDYLLQIVTRDIDAYQRLIDEMLDDRIGLSRYFTYVV
TKPVKGTGAPPLKILLGLE
>gi|56696036|ref|YP_166390.1| succinylglutamate desuccinylase/aspartoacylase family protein [Ruegeria pomeroyi DSS-3]
MQKNPISPTIPLDRDGVFHGFLKLPHSRDDSAWGSVMIPLTVIKNGAGPTALLTGANHGDEYEGPVALHE
LAATTSAEDVTGRLIIVPAFNYPAFRAGSRTSPIDRGNLNRSFPGRPDGTVTEKIADYFQRTLLPMADLA
VDFHSGGKTLDFVPFAAAHILEDKATQAACFAAMKAFNAPYSVELLEIDSAGMYDTAVEEMGKVLVTTEL
GGGGSSSARSNAIAKKGLRNVLIHAGILKGEMQLDETVNLTMPDDDCFVFSEGDGLFEMMIDLGAPVAKG
DLLARVWPLDRTGQPPVEYRARRAGLVISRHFPGLIKSGDCVAVVGVTGA
>gi|56696037|ref|YP_166391.1| peptidase, putative [Ruegeria pomeroyi DSS-3]
MADPKLFFTRAEFQARLDKTRAEMARRGLDLLIVTDPSNMNWLTGYDGWSFYVHQCVVLTLEGEPLWYGR
GQDANGALRTCFMDPVNIIGYPDHYVQSTERHPMDYLSARLKDRGLDGGVIGVEMDNYWFTAAAFMSLQK
HLPNARFTDATALVNWQRAVKSEAELTYMRQAGKIVERMHQRIFERVEPGMRKCDLVADIYDAGLRYDAG
LGFGGDYPAIVPLLPSGSDAAAPHLTWDDLPMKSGEGTFFEIAGVMHRYHCPLSRTVFLGKPTQTFLDAE
KAVLEGMEAGLEMARAGNTCEDIAKAFFKVLKSYGIEKDSRTGYPIGVSYPPDWGERTMSLRPGDTTVLQ
ENMTFHFMTGLWMEDWGFEITESIRIGADGPECLSNVPRKMFVKD
>gi|56696038|ref|YP_166392.1| ectoine utilization protein EutC [Ruegeria pomeroyi DSS-3]
MKTWMWKPTSKEAQMPDIRILTEAELRDLVPLDLDAVDCVEQGFTTLAGGKVVMPPIMTLGVPDHNGEVC
VKTAYVPGIDSFAMKMSPGFFDNPKIGLPSTTGLMVVFSSRTGILEALLLDNGYLTDVRTAAAGAVAARH
LARAEASHVCIIGAGVQARMQLQAMTLVRDIESAAIWARDVAKAEAAAASLRQDLGIDVTVGTDIAQAVS
PADIVITTTPASSPVIRAEWLQPGQLVIAMGSDQEHKGELEPACLTKADLYVPDSQAQCALKGELRSAIE
AGLIAAGQSFAELGQVTSGQTPGRRSDRELIIADLTGTGVQDTAIATLAGNRADATGAGATFTS
>gi|56696039|ref|YP_166393.1| threonine dehydratase [Ruegeria pomeroyi DSS-3]
MTTKITLQDSIRARARIAGRIRETPLVESPSLSSLSGRQVLLKLESRQITGSFKLRGATNAVLSLTDTQR
AAGVVGVSTGNHGRGLAYAAAEAEVRCIICMSELVPQNKVDGIRSHGAEVRILGRSQDDAQQEVDRLVRD
GMTMLPPFDHPDIIAGQGTVALEMLDQAPDLETVLVPLSGGGLISGVGMVLKAANPDIRVIGVSMERGAA
MYECLQAGRPVQVAELPTLADSLGGGIGLDNAYTFEMTKAFVDEVVLVSEAEIAAAIRHAYFEEREVIEG
SGSVGIAALLAGKIGNPGRCVSLVSGQNIAMDLHKRIIDGEDVDVEADIKGGADA
>gi|56696040|ref|YP_166394.1| Asp/Glu/Hydantoin racemase family protein [Ruegeria pomeroyi DSS-3]
MALDTHSAPSRVPARLDDRPVRKRIALVALATDHTSERDFARICDPDQVGVYTNRIAFENPTNKETLLKT
GPRLTEAAARILPGEEVDVVAYCCTAASIVLGNDTVTRHLNAAKPGTPCVTPSSAAFDAFAALGVRRVSL
LTPYSPDVTDEMAQYFAVHGPEVVNAACFGLTDDREMARISEDCIIEAALAAFDKDAEALFLSCTALRAA
TCAQRIEDRLGKPVVTSNQAMIWRCLRLAGIPDMVPGYGRLFHL
>gi|56696041|ref|YP_166395.1| universal stress protein family protein [Ruegeria pomeroyi DSS-3]
MFASILVPFDGSHGAEAALAKAAALACLCGAELTLLTVYRHHSPLEASMHVVRPDEPADLDDIMRTHARE
VAEHGKARAAAYGVPAPRAFVKGGPVARTIAGFAKEHGHDLTVIGSRGLGSFERALLGSVSHKVTSLSET
PVLVV
>gi|56696042|ref|YP_166396.1| TRAP dicarboxylate transporter, DctM subunit [Ruegeria pomeroyi DSS-3]
MAATIFLTMIVLLLLGFPMMIPLIAGAFIGFLMLFGDLARTETMVQQMLAGIRPASLIAVPMFIFAADIM
TRGQSAGRLINVVMAYVGHIRGGLAISTAAACTMFGAVSGSTQATVVAIGSPLRPRMLKAGYKDSFVLAL
IVNASDIAFLIPPSIGMIIYGVVSSTSIAELFIAGIGPGLLILVLFSAYAYIYAVRNDVPTEPRASWAER
ARTMRQALWPMGFPVIIIGGIYGGVFSPTEAAAACVLYALVLEVLVFRSMSLADVYDTAKSTGLITAIVF
ILVGAGAAFSWVISFAQVPQQILGAIGIAEMGPIGVLFVISIAFFIGCMFVDPIVVILVLVPVFAPVVKS
VGLDPVLVGTIITLQVAIGSATPPFGCDIFTAIAVFKRPYAEVVRGTPPFILMLLGVSVALIFFPQIALF
LRDLAFSK
>gi|56696043|ref|YP_166397.1| TRAP dicarboxylate transporter, DctQ subunit [Ruegeria pomeroyi DSS-3]
MQQTHESALPGFLGMLDSAISRIESFLLAMGVLLMAANTVANVVGRFVLGNSIFFSEELNRILIILITFA
GISYAARNARHIRMSAVYDLLPARLRKGMMVVISVVTAAFMFLLCYYAAKYIGSQASRGRVLPALQIPVW
VILIWVPAGFFMTGAQYLLTAVRNLTSSGIYLSTHVQEGYEDAEEIEI
>gi|56696044|ref|YP_166398.1| TRAP dicarboxylate transporter, DctP subunit [Ruegeria pomeroyi DSS-3]
MAQSITFTFGAVAAAGIALAAGTAAQADTWRYAFEEAMTDVQGVYAQKFKEEIEANSDHEIQLFPYGTLG
ESADIMEQTQDGILQFVDQSPGFTGSLIPEAQVFFVPYLLPTDQDHLARFFKESKAINDMFKPLYADQGL
ELLNMFPEGEVAMTTKTPVTTCSDLDEVKFRVMTNPLLVESYKAFGATPTPLPWGEVYGGLQTNVIQGQE
NPTFFLYSTKIYEVTDYITYAGHNNFTTAVMANKDFYDGLSAEDQQLVQNAALAAYDHTVVYQQQAADTE
LAKIMEAKPEMQVTVLTDEQRSCFKEAAAEVEAKFIEMTGDSGAAILKQMKADLAATAN
>gi|56696045|ref|YP_166399.1| GntR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MTNWLPDPSALASPLHSSLALAIAKAISEGKLPKGTQLPTHRKLAEELGLSVHTVSKAYESLRRQRLIDG
QVGRGSYVLDLNTPDDQPFQLSSERGRNFDLSISRPAFSQRHAELFQQVLADLPQGLDPSYYLACRPNVG
HDAHRAAGETWLRICGLDVPSERIIMTNGVSHGMSAALSALARPGDTVVSSRITHHLLVSGCSYLGLNLV
GIDFDQDGMLPDALDRHCSENNAKVLFLLPSLANTTVEMIPEERRQALVQVARKHNLYIIENDAFGPVAE
DRPVPVAALAPERTIYLTTFTKCTVSGLRAGYMAAPEHLLPALTGRIVVFGWMATPLMCEIATRWVLDGT
ALELALWQRRALAERYEIASQALQGHQWRGHPSALHLWLPLESGWTTSSFVAYARQLKVAVAPDAPFLTP
KTPPPNAVRISLGSVQDLSRFKQAMELVGGMLSRPPEGVAPLAF
>gi|56696046|ref|YP_166400.1| RNA methyltransferase [Ruegeria pomeroyi DSS-3]
MKKPKWVVEKEQAKKASAAETVWLFGLHAVRDALMNPKREKLRLIVTLNAREKLAEAIDAAGIEPELADA
RRFSAPIDPGSVHQGAALEVKPLNWGSLAEVAIGAENPRVILLDRVTDPHNVGAILRSAEVLGASAVIGT
RHHSAPETGALAKTASGALERQPYLRMRNLADAITELQGMGYLVLGLDGEASETIEAALAGQTDRPVALV
LGAEGPGLRQKTKETVDKLVKIDAAGGFGSLNVSNAAAIALYASKAH
>gi|56696047|ref|YP_166401.1| hypothetical protein SPO1151 [Ruegeria pomeroyi DSS-3]
MPRLVTCCYCGARATLAADRSGMLACEACGAPIQQVDSAAQAPRPTAVPEPAAAAVAAAAERPAPRQAEK
PEKKPKKRKKRKGLFSRALEEVWDKVEDIFD
>gi|56696048|ref|YP_166402.1| twin-arginine translocation pathway signal sequence domain-containing protein [Ruegeria pomeroyi DSS-3]
MTMLNRRTLLSGLAGALTASALPLWAETPVFYADDGAAIRGYDTVAYFTQGAPVQGAPAIAVMWKGAVWH
FASHENRAAFEANPRAFAPQFGGYCAYAVARGYTTDTDPTAWRIVDGELFLIHSPEVARLWAEDIAGNIA
GARRNWPSVLDR
>gi|56696049|ref|YP_166403.1| CoA-binding domain-containing protein [Ruegeria pomeroyi DSS-3]
MAMFDYSDDHLKRILKRTKVIAVVGVSMNPVRPSYYVARYLALKGYRVIPVNPGHAGQRLFGETVRAGLS
EISEPVDMVDIFRRSEAVPPIVEEALEAFPGLKTIWMQIGIEHAEAAARAEARGVDVIQNRCPKIEYQRL
FGELRMGGFATGIISSKL
>gi|56696050|ref|YP_166404.1| putative lipoprotein [Ruegeria pomeroyi DSS-3]
MTTFRALLAILAVLLITACTDTQSVSQKDVNALAQQLRALGPDVDPAEAQRAAEISYSYGRQLARDYNVT
SSPIVHNAKVLNGFRERGLCVHYAQDMQKRLNQENFRTLVVHRAIAEPDSIWRIDHSTAILSRRGDDMFD
GVVLDPWRYGGELFWSLTREDTRYNWRPQREVLEKKAAEKLARQPS
>gi|56696051|ref|YP_166405.1| phosphoribosyl-ATP pyrophosphatase [Ruegeria pomeroyi DSS-3]
MSILHDLAATIEARKGADPDSSWTAKLLAKGPEKCAEKFGEEAIEAIIEAVKGDRAKLVSEGADVLYHFL
VMLAARDVALDDVLAELAHRQGQSGIAEKAARPKG
>gi|56696052|ref|YP_166406.1| imidazole glycerol phosphate synthase subunit HisF [Ruegeria pomeroyi DSS-3]
MLKTRIIPCLDVADGRVVKGVNFVGLRDAGDPVDAARAYDAAGADEICFLDIHATHENRGTMFDVVSRTA
EQCFVPLTVGGGVRTHADVRALLLAGADKVSFNSAAVANPDVIAEAADRFGSQCIVCAIDAKTVEPGRWE
IFTHGGRKPTGIDAVEFARLVTAKGAGEILLTSMDRDGTKSGFNLPLTRAIADAVDVPVIASGGVGTLDH
LVEGVTEGHASAVLAASIFHFGEYTIREAKEHMAAAGIPMRLT
>gi|56696053|ref|YP_166407.1| hypothetical protein SPO1157 [Ruegeria pomeroyi DSS-3]
MIRTYPIVEKTPLPATAQLWQAVQPGDFIDGYAVASQISPRAAAEIGLSLPGWANALLRLRNWIVRPLGL
KTDVSDSGDKAIFPVTYEGADELILGADDSHLNFRISLVQQAGRLHMATWVHRNNLLGRVYLAVVMPFHI
LIVRGAMRRIARHGGAIASAPGAQ
>gi|56696054|ref|YP_166408.1| 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [Ruegeria pomeroyi DSS-3]
MILYPAIDLKDGQAVRLVHGEMDQATVFNDNPAAQALEFVAAGCEWLHLVDLNGAFAGEPVNAAPVEAIL
EQCKVPAQLGGGIRDMATIERWLDKGLARVILGTVAVENPDLVREAARAFPGKVAVGIDARNGRVATKGW
AEETDVMVTDLAKSFEDAGVAAIIYTDILRDGAMKGPNIKATADLARAVSIPVIASGGVSSLEDLIALRD
CGASLNGAISGRALYDGALDLKQALAALKG
>gi|56696055|ref|YP_166409.1| hypothetical protein SPO1159 [Ruegeria pomeroyi DSS-3]
MKRLILAAGATLALAGMAMADPAAGTWQTEPGDTGGYLHVAIAPCGAQVCGTIKAAYDKNGAKQNDYEHA
GKRMLWDMQPGGDGSYSGGQIWAPDSGKTYGSKMSLAGNTLTVKGCVAGGLICRGQAWKRVN
>gi|56696056|ref|YP_166410.1| hypothetical protein SPO1160 [Ruegeria pomeroyi DSS-3]
MLMPRQTTPPLSLPLVGGGRFDLSAETSTRWTLICFYRGLHCPICATYLKELEKRVADFAERGVACVAVS
SDSEERAQAMAEKVGGGTLRFAYDLPLAEARDWGLYISTSRGKTSIGIEEPALFSEPGLFLVTPERTLYY
GAVQTMPFVRPHFSELVAALDFAIPNNYPARGEYTGAV
>gi|56696057|ref|YP_166411.1| AraC family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MSCSALSQGLVFGKSEFPDRGSDTRMDRLTALMERFQLRVEAAAPEDANLLALAGADGTPGELLFYPAGT
GRAGDPLFAARVSWSGESNPFLAALPEVVRFDLSADPEARAVVELIRVEVAARRCGAQSVVNRLGEVLMV
RLLRDQIAQGATRPGLLAGLADPRLSRAIVAIHDHPGRVWSNGDLAAEAGLSLSRFAELFAAQVGETPMG
YLRRWRLILAAQDLGRGDRVDRVARRYAYGSPEAFARAFRRAHGVAPMSLRAG
>gi|56696058|ref|YP_166412.1| imidazole glycerol phosphate synthase subunit HisH [Ruegeria pomeroyi DSS-3]
MLTAIIDYESGNLHSAEKAFQRMARETGAGEVVVTSDADLVARADRLVLPGDGAFPACAAELRGHKGLYD
AMVEAVEQKGRPFLGICVGMQLMATTGHEYEETPGLGWVAGDVVRITPENAALKVPHMGWNDLVIEAAHP
IFDGIAGGDHVYFVHSYHFRVTNPTERLAHVDYGGPVTAVVGRDTMVGLQFHPEKSQAIGLRMIGNFLTW
TP
>gi|56696059|ref|YP_166413.1| imidazoleglycerol-phosphate dehydratase [Ruegeria pomeroyi DSS-3]
MRRASISRQTAETEISVDINLDGTGAYDNQTGVGFFDHMLDQLARHSLIDMTISAKGDYHIDDHHTVEDT
GIALGQALSAALGDKRGIRRYGECHLPMDDAQVRCALDLSGRPFLVWNVDLPTAKIGTFDTELVREFFQA
FSTHGGITLHVDQLHGLNSHHIAEAAFKAVARALRQAVESDPRKGDAIPSTKGTL
>gi|56696060|ref|YP_166414.1| hypothetical protein SPO1164 [Ruegeria pomeroyi DSS-3]
MAARVSLWPNQHQRGGMTTCVFIQIRCKPGSTYKVAEDIALREIHSELYSTSGEYDLLMKLYIPAGADVG
KYINDHLLVIPNIERSLTTMTFKAF
>gi|56696061|ref|YP_166415.1| hypothetical protein SPO1165 [Ruegeria pomeroyi DSS-3]
MARGSDHPAPGYPGRAALAAALLCAGLLPVPALGEADCTQDAMIVFDASGSMAEMGYNGLDRPRILDARE
ALHDALPRIAALRRLGLVTYGAAMDGDADGDLCKRVSMPFTPSPNAAGQILNLIDAIEPDGNTALTDAVN
LAARVFDQPPRPGVIVLVTDGDETCGGAPCALAADLARDTPGLTVHVIGFRVRSQFFGWEGGDGNPTVPE
TISPAECLAQATGGEYVSTETVEELIRALNQTLGCPLYGALAPLRTP
>gi|56696062|ref|YP_166416.1| aminotransferase [Ruegeria pomeroyi DSS-3]
MAPVIYPTTNLTATEQLVLDRGKGIYVYDTDGNEYIEGLAGLWCTSLGYDNAEVIGAITDQLNRLPFTHT
FGGKTHEPIMKLAEKLKAMVPVEDAYFFFGNSGSDANDTHYKMLRYYFNAIGKPEKRKIITRERGYHGVT
VAAGSLTSLPANLAHFDAPVEALHILRSDAPHYYTGRQGNETEAQFVDRILDNLEQQILAEGADTIAAMI
VEPITGASGVIVPPEGYYEKLQTLLRKHDILVWADEVICGFGRTGADFGCTTMGIKPDLMTFAKQLSSAY
FPISASVIPGWMYEKMIAPSAAVGVFGHGYTYSGHPVACAAALKTLEIYERDDLFGHAAEVGAHMQEQLR
AIFTDHPLVGEVRGKGLIAALELVSNKTTGATIEKGAGGATVQRLAQENGLLIRAVAGNSAALCPPLIIT
KEEVDEMLRRLKTAVDGAYAELKDKGLLAA
>gi|56696063|ref|YP_166417.1| hypothetical protein SPO1168 [Ruegeria pomeroyi DSS-3]
MLEPDNRGKVQIMKLAAIALALGATLAGPVLSQSLEPWGSSDYWDVLIDPTLGNGCLIQSTFTDGSVVRI
GFDRVEGAGYVTAFNEAWGDIVEGEWYPVLFALDGAEYEAEARGMYLEGVPGADILFDNPDFLYDIAAKY
TMTLYNESGEVMSIDLTGSMAALEAAIECQEEMG
>gi|56696064|ref|YP_166418.1| pyruvate carboxylase [Ruegeria pomeroyi DSS-3]
MTDFKKILIANRGEIAIRVMRAANEMGKKTVAVYAEEDKLGLHRFKADEAYRIGEGMGPVAAYLSIPEII
RVAKECGADAIHPGYGLLSENPDFVDACVQNGITFIGPRAETMRSLGDKASARKVAIAAGVPVIPATEVL
GDDMDAIRKEAAEIGYPLMLKASWGGGGRGMRPIHSEKELAEKVMEGRREAEAAFGNGEGYLEKMIIRAR
HVEVQILGDKHGEIYHLWERDCSVQRRNQKVVERAPAPYLSQAQREELCDLGRRICAHVNYECAGTVEFL
MDMDSGNFYFIEVNPRVQVEHTVTEEVTGIDIVQAQILIAEGKPLAEATGKASQGEIALNGHALQTRITT
EDPLNNFIPDYGRITAYRSATGMGIRLDGGTAYAGGVITRYYDSLLTKVTAWAPTPEKAIARMDRALREF
RIRGVSTNIAFVENLLKHPTFLSNEYTTKFIDTTPDLFQFKKRRDRGTKVLTYIADITVNGHPETRDRPM
PAAEARMPKPPAKRGEPRMGTRNLLEQKGPQAVADWMKAQRQLLITDTTMRDGHQSLLATRMRSIDMIRV
APAYAANLPQLFSVECWGGATFDVAYRFLQECPWQRLRDLREAMPNLMTQMLLRGANGVGYTNYPDNVVR
EFVRQAAKGIDVFRVFDSLNWVENMRVAMDAVVEQNKICEGTICYTGDILNPERAKYDLKYYVAMGKQLR
DAGAHVLGLKDMAGLLKPAAARVLIRALKEEVGLPIHFHTHDTAGIASATILAASEAGVDAVDCAMDSFS
GNTSQATLGTVVEALRHTDRDTGLDVKAIREISDYFEAVRAQYAAFESGLQAPASEVYLHEMPGGQFTNL
KAQARSMGLEDRWHEVAQMYADVNQMFGDIVKVTPSSKVVGDMALMMVSQGLTRAQVEDPKSDVAFPDSV
VDMMRGNLGQPPGGFPTVILSKVLKGEAPNTERPGAHLPPVDLEEVRSKVSAELEGKEVDDEDLNGYLMY
PKVFMDYMGRHRQYGPVRTLPTRTFFYGMEPGEEITAEIDPGKTLEIRCQAIGETDENGEVKVFFELNGQ
PRVIRVPNRLVKSTTMQRPKAEPGNANHLGAPMPGVVATVAVQAGQQVKAGDLLLTIEAMKMETGIHAER
GATVKSVHVQPGGQIDAKDLLVELE
>gi|56696065|ref|YP_166419.1| FMN-dependent alpha-hydroxy acid dehydrogenase family protein [Ruegeria pomeroyi DSS-3]
MDLKWRARRRLPRFVWEYLDSGTGVEATKARNRASLDRVGFLPSVLHGPLEHDLTTTLLGTTYALPFGVA
PVGMSGLIWPDAEGHLARAAAAANIPYCLSTVASQSPEDLAPHIGPQAWFQLYPPKNPDIRRDLVERARQ
AGFKTLVLTVDVPVASRRERQVRSGLTQPPTLTPRLLAQVAMRPAWAMGMARRGMPHMRTLDKYSQGLTN
LPPTAHIGYLLRTSPTEDYVAWLRDAWQGPFVVKGVLRPEDGERMERLGVDALWVSNHAGRQFDGAPGAA
EMLPHIRAATRLPLIFDSGVESGLDILRALALGADFVMLGRAFHFGLAALGPRGAAHAIDILQKDIESNL
GQLGAARLTDLPPTRPLSIAQ
>gi|56696066|ref|YP_166420.1| diguanylate cyclase, putative [Ruegeria pomeroyi DSS-3]
MTQKAFASWRLRWLGLVLFLCAMVAVAAWSVFRLPVPVVDRMIEADIRKQAQLWSRGITMHLDHLSETFA
TGALDEHDIEFLMLMPNTSDAYRLTLLAADGRVIWSTREDEIGTLTQDAPFFDVVARGGTHFTLSERPIT
EVDGLLPVDEPVQTGSLRCIAEVYTPVMLNGQFLGALKFYADVSERRQTFAKRLQLVLAALSSFALLTMC
ITMLVIYRTNRARFAALQSRSETERTLMDEQLRLAREVRLLGELNEWLQSCRSLEELFAMVSRFMEHILP
DAEGSLYVYSNSRDVLDGSAGWNGGAFKDHIHPEACWGLRRGRSYEYGASEVDFVCDHAEPHDGRPYFCF
PVLAHGETVGLMHLRAQPGAEAEFSASKRLAQMCAEQISMAIANVRMRDQLHDQSVRDPLTGLFNRRHLT
ETLRKQLLHCQTRGGRLSLIAVDVDHFKKFNDTHGHDAGDMVLRAVGAALEQACDRDEVACRIGGEEFML
VLLDCAPEDALTRAELLRQSVEEVSVRYGEKTLPRVTISAGVAHYPRHGTMPQDLMRAADDALYEAKGLG
RNQVRVAQSPGTDPREAQAAKPAKAKDPKTPEGKFAAE
>gi|56696067|ref|YP_166421.1| DNA helicase II, putative [Ruegeria pomeroyi DSS-3]
MAARPAPYLDDLNPAQREAVERLDGPVLMLAGAGTGKTKALTARIVHLLMTGRARPNEILAVTFTNKAAR
EMKNRVGRLLGQPAEGMPWLGTFHSICVKLLRRHAELVDLKSNFTILDTDDQLRLLKQLVQAANIDDKRW
PARLLANIIDGWKNKALTPDKLPAAEAGAYNHRGPELYAQYQTRLRELNAVDFGDLLLHMVTIFQTHPDV
LEQYQRWFRYVLVDEYQDTNIAQYLWLRLLAGGHRNICCVGDDDQSIYGWRGAEVGNILRFEKDFPGAHV
VRLEQNYRSTPHILAAASNVIRGNEGRLGKELWTDAQEGEKVRLIGHWDGEEEARWIGEEIEAMQGGTRG
VRPISLDEMAILVRAAHQMRAFEDRFLTIGLPYKVIGGPRFYERMEIRDAMAYFRLVTSPEDDLAFERIV
NTPKRGLGDKAQQAIRAVARENGVSLVEGARIAVENGLIKGKGGKALGELTDGLARWAALTRGPRIEIDD
DSVIEDGAAPIQFGAPEMSHIELAQVILDESGYTAMWQNDKTPEAPGRLENLKELVNQLDNFENLQGFLE
HVSLVMDNEQDSGGAKVSIMTLHAAKGLEFPAVFLPGWEDGLFPSQRSMDESGLKGLEEERRLAYVGITR
AEEVCTISFAANRRVFGQWQNALPSRFIDELPEDHVEVLTPPGLYGGGLSSPGIESRAAAADGYNSPGWK
RLQARQGQHGLSQPRESRNTVIDLAAVASFTLSARVFHQKFGYGSVVGVEGDKVEVAFDKAGLKKVVARF
LCAPDDVPF
>gi|56696068|ref|YP_166422.1| hypothetical protein SPO1175 [Ruegeria pomeroyi DSS-3]
MELLWILMVLLSAVTHPLRDLTLKGVAHPVSCYTGVCLSWVVFAGAHMVLGGQGAALPAQVWPLVAVSGL
GLTVYYYGTLSALRRGNLSAYYPIVRSSPLAIAALSWLASGQSYSWAALSGMALIILSGLMIQRGNGRLL
DDPRAFAMALMAMLGSAAYSISDATAMQATTSAPFLFWTYALVTLAMTALRAWEDRGSSAPLLGVVRGWV
QNPWRILFAGLSSYLSYLLILRVFQLGAEAAAVSAVRQVSIPVSVILAALVLKEPRGLRRLGWAVLIAIG
IAMIALQ
>gi|56696069|ref|YP_166423.1| Ser/Thr protein phosphatase family protein [Ruegeria pomeroyi DSS-3]
MKFIHLTDIHLMPPGQSVSGSDPIEKLSKVFEDIATWHSDAEFCVVSGDLADLGDRESYEWLRQRLAHFP
VPVFLMLGNHDVRETFISVFPDHPRDANGFIQHAHTAGGARFLFLDTLTGGPDIHDGELCNDRLAWFAAE
LERAGDMPVYVFLHHPPFDIAIPYVDEIKLRQPDAFHAALQAGRNIRHIFYGHVHRTTYVNWRGYPFTSL
PSTNHQVPLIPEREGQEHSAEPLAYGVATIEGDQFTLHVDHYLGKPGA
>gi|56696070|ref|YP_166424.1| hypothetical protein SPO1177 [Ruegeria pomeroyi DSS-3]
MAVTSEHSTLKGHHGLGVLALIEAARSRFAQHRVYRQTVNELSALSGRELADLGLHRSMIKRVALQAAKE
YTAR
>gi|56696071|ref|YP_166425.1| cell division protein MraZ [Ruegeria pomeroyi DSS-3]
MARRFRGESNHKVDSKGRVSIPASFRRVLEAGDPNWQSGGNPELVIVYGDHRRKFLECYTMEAIDEVDAK
IDALPRGSMERKMLQRMFHGQSFPTSVDETGRLVLPAKLRTKIALEDEAFFIAAGDTFQIWNPATYDQEE
LAAAEEWLDELPEDFDPMQYLDGAGGS
>gi|56696072|ref|YP_166426.1| S-adenosyl-methyltransferase MraW [Ruegeria pomeroyi DSS-3]
MSRTAAPPSDDPHIPVLLRPLLAAVAPVSGIWLDGTFGAGGYTRGLLAAGADRVIAVDRDPLAFELAAGW
AKDYGDRLVMQQGVFSRMDEYASDLDGVVLDLGVSSMQLDLAERGFSFMKDGPLDMRMSQEGPSAADLVN
TATEADLADILFHYGEERASRRIARAIVKARAEAPIETTLQLAALVESCLPRPKPGQSHPATRSFQALRI
AVNAEYDELFEGLMAAERALKPGGKLAVVTFHSIEDRMVKRFLQARAGRSGRANRYAPETVEDAPQFELL
SRKAIGPDDQELAENPRARSAKLRVALRTDAPAGAVDAKSIGMPQLKGGTR
>gi|56696073|ref|YP_166427.1| hypothetical protein SPO1180 [Ruegeria pomeroyi DSS-3]
MRSVIYVLTALAVLGLALWAYQENYRTQEVLKDTQRLQRQIGEAQVRLSVLRAEWAYLNRPDRLRELADL
NFERLGLLPMRADQFGRVSEIMYAEDPALPIINGIDVSNFSDAGTLPPEQQP
>gi|56696074|ref|YP_166428.1| penicillin-binding protein [Ruegeria pomeroyi DSS-3]
MIRTPLRPLARVLHARAKGENPDLIERENIRLRHEEMQDRSRARAEGRLLVLGVFFFCAFSVVGARMGML
ASSEAQEPLASATGATIAAQRADIVDREGRLLATNFETHSLYAQPPLMVDPVAAAEGLVRIFPDLDKDRL
VRDFSGKRKFIWIKKRISPEQKQAVHDIGDPGLLFGPREMRLYPNGRLAAHVLGGAGFGREGVDAAEVIG
VAGVEKQFDGYLRDPANGAKPLQLSLDLTVQAAMEQVLDGGMKIMSAKGASAVLMDVHTGEVVAASSLPS
FDPNDRPRPPTSGFDPSDSPLFNRYVQGVYELGSVFKIFAAAQAVDLGLVNSDTIIDTSGPMRIGKFPIG
EFNNKNYGKISIADVIVHSSNRGTGRLALQIGAERQQAFLNSLGMFDPTPFEIVEASGGQPLKPKTWGEL
STVTISYGHGLSTSPMHLAAGYAAIANGGQYVSPTVLKQKGPQYGPRVMSENAARQARAMLRKVVTSGTA
SFGEVPGYQVGGKTGTADKPKPRGGYYDDKVIATFASLFPASDPKYVLVVTLDEPSILAYGEKRRTAGWT
AVPVAAELIGRVAPLLGLRPQLEPGQGAGYTLTSN
>gi|56696075|ref|YP_166429.1| UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase [Ruegeria pomeroyi DSS-3]
MGDTRRRLSQLALTARGGRDPDISGLAVDSRLVREGFLFAALPGSRVHGGDFIQYALRMGASAILTDAEG
ARIAAAELAASQAALVVVEDPRQTLALTAALWFGAQPATMVAVTGTNGKTSVSTFVRQIWTELGHDAVNL
GTTGVEGAWTAPLAHTTPEPITLHRCLAEAVANGVTHAAMEASSHGLEQRRLDGVVLKAAGFTNFTQDHL
DYHETFEAYFAAKAGLFRRVLPPDGVAVINMDDPKGAEMRAIAAARGQNVLTVGRGPCDLSLTNQRFDAT
GQDLLFSWRGKAYQARLDLIGGFQAENILLACGLVIASGGAPERVFETLPHLGTVRGRMQLAATRANGAA
VFVDYSHTPDAVATALRALRPHVMGRLVAIVGAGGDRDPYKRPLMGKAAVENADIVIITDDNPRSEDPAL
IRAAVMQGAPGATEVGDRAEAILRGVDTLEPGDALLICGKGHETGQVVGDQVLPFDDVEQASIAVAALEG
RLA
>gi|56696076|ref|YP_166430.1| UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [Ruegeria pomeroyi DSS-3]
MTLWTAAEAAEATGGRALGDWQVSGISIDTRTIAPGDLFVALTAARDGHDFVAQALDKGAGAALVSRIPE
GVGEDGRLLLVDDVQTGLEALGRAGRARAQARVVAVTGSVGKTSTKEMLAAMLGAQGRTHASVASYNNHW
GVPLTLARMPRDTEFAVIEIGMNHPGEIAPLARQARPHVAMVTTVAAVHLEAFDDVAGIAREKAAIMEGL
EPGGVAVLNADIAEADILRAAARGARQLSFGRAAQDYRLTGVEVADGMTHARADTPAGPVSFTLQSAGTH
FAMNALGALACCDALGADAGQSLQGLERWTPYKGRGARETISLAGGPVTLFDDSYNANPTSVGAALEVLA
GTPGTRRVAFLGDMKELGPEELPLHAGLAALPAMERVDQVHCIGPLMRALFDALPEAKRGRWTETGAEML
AELPALVAPGDAVLVKGSLSMGLARLVDGLREMGHGAGSKQSET
>gi|56696077|ref|YP_166431.1| phospho-N-acetylmuramoyl-pentapeptide-transferase [Ruegeria pomeroyi DSS-3]
MLYWLTALSDGGDVWNLFRYITFRAGGAFMTALIFGFLFGRPLINVLRRKQGKGQPIRDDGPEGHFSKAG
TPTMGGLLIVGALLTSTLLWARWDNPFVWMVLFVTLAYALIGFADDYAKVSKQNTKGVSGKMRLALGVII
AVIAALWASYNHPAELQNQLALPVFKDTLINLGLLYVPFAICVIVGSANAVNLTDGLDGLAIMPAMIAAS
TLGVIAYAVGRVDFTEYLDVHYVPGTGEILIFTAALFGAGLGFLWYNAPPAAVFMGDTGSLALGGALGAI
AVATKHELVLAIVGGLFVVEALSVIIQVLYFKRTGKRVFLMAPIHHHYEKKGWAEPTIVIRFWIISLILA
MIGLATLKVR
>gi|56696078|ref|YP_166432.1| hypothetical protein SPO1185 [Ruegeria pomeroyi DSS-3]
MTSNFKKSLGEIVSIEAWYTGFSEEDQQSDLFLHVRFQEAVFGGDPSQSVRFKLRLKKADIVVIAEAPIN
VPRSRVRRDRLNMEAKLTEVRKTELEGSVEGSVEANVKPTGVSGGAQFKATGKAAGAVEKNSTREIRHSG
TLVEHSVDSEGNNRWSFNPAEGPNLFGQAFNATEPVMLMRIDGKPPKIPPTVKVRVHCLREDIDVLELEA
KNISKSLLNRGIGEEKKLKLAEEIIKDYLSREGLEFEDVSEKFAKLVVADVIAHDE
>gi|56696079|ref|YP_166433.1| TPR domain-containing protein [Ruegeria pomeroyi DSS-3]
MPMSSPMMSDTDREDLDAILRTVLVSDKGYVETLSRATGLNGKALTDKAAFTLSRLSAVGGYDYENEALE
VAGRYLAEARFTEAEAIYRQVLVSFPEKHGFNHPGYATRLNNLAEVLRATARYDEAESLYRQALEIDREA
LGLEHPDYGIDLLNLAGLLHDRGRYEAAEPLYREAMTIIGKVVGEEHYRYATAQNNLAGLLQDMLRFEEA
EALCRQALEITSKTLGESHSVYATRLNNLAELLGTTERYGEAEPLYRQALEITQKTLGEEHPDFAIRLNN
LAVLLKATGRYEEAEPLYRQALEITHRTLGEAHPDYATRLNNFAGLLDSTERYDEAEPLYRQALEICEKA
LGVEHPSTQTVRANLELFLSEKPD
>gi|56696080|ref|YP_166434.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Ruegeria pomeroyi DSS-3]
MIPVKGFAGANVAVLGLGRSGLATARALRAGGAEALCWDDNPAAREAAEGEGFTIRDLRKQGVRDDTACL
IVSPGIPHLYPAPNPVVAAALEAGVPVDNDIGLFFRSFAGPEWDGFDTLPRVVAVTGSNGKSTTSALIHH
ILSEAGRPVQLAGNIGRGVLDIEPGEEGSVVVLELSSYQTDLARALTPDVAVFTNLSPDHLDRHGGMGGY
FAAKRRLFAEGGPDRAVIGVDESEGLYLAGQMSEGPGDDRVIRVSVSRKLTGPGWQVFARKGYLSEYRKG
RQAGSIDLRDIRGLPGAHNHQNACAAYAACRALGLSPKAIEAGMRSYPGLPHRSQIVAEAGGVTYVNDSK
ATNVDAALKALGAFKRIRWICGGLQKEGGIAALNGGLAEVLKAYVIGREAAGFALQLEVESEVCTTMDEA
VARAMAEAEPGDTVLLAPAAASFDQYDNFERRGEDFMAEVQKRLDG
>gi|56696081|ref|YP_166435.1| hypothetical protein SPO1188 [Ruegeria pomeroyi DSS-3]
MPNRARYGTPGQMQLNTIILGAGAAGMMCAAHAGPGTLVLDHARAPGEKIRISGGGRCNFTNMYAEPENF
LSQNPHFCKSALARYTQWDFIDLMNRHHIAWHEKTLGQLFCNGSAKQVISMLLSEMERAGATLWLSTTLK
DLSHADGRFSLTVEREGRTEHLSARNLVLATGGKSIPKMGATGLAYDIARQFGLGVTETRAGLVPFTFPE
SRFAPLAGLSLPARLSNARATFDEALLFTHRGLSGPAVLQLSSYWREGEEIAIDLAPDQDLFAALRDQRQ
AAGRRDLTTELARHLPARLVEFLAPQLGLKGRLADQSDSALRALAETLRDWRLTPSGTEGYRTAEVTLGG
IDTDMLDSRTLRSKSQPGLYAIGEAVDVTGWLGGYNFQWAWSSGHAAGTAIAKTQR
>gi|56696082|ref|YP_166436.1| hypothetical protein SPO1189 [Ruegeria pomeroyi DSS-3]
MRYSTGVILVATAAMLWSLMGLAIREIEVAGTWAILFWRSAAMVPALLAFFVWRKRKPILPALRATGRAG
LMAGFGLVVAFAGAIFAIQSTTVANAVFLFAASPFLAAALSWVVLRETVRRATWAAIAIALIGLVVMVRE
GLALGALAGNLAALASAMGFALFTLSLRWGRLGDMMPAVAIGGMLSMMVALGMLGLTGEPLLVPARDIAI
AMAMGAGLLAVGMALYTMGSQVVPAAELTLITMIESMLAPVWVWLLLGEEASAGTLWGGAIILGAVALNA
LSGMRRKPVMPPMA
>gi|56696083|ref|YP_166437.1| transcriptional regulator family protein [Ruegeria pomeroyi DSS-3]
MALKITRNKAAPLPGRCPLSECMKLLGGAWTPNVIWYLSGGARRFNELRVDIPGISAKMLTTRLRELEHK
GVVQREVRPTSPPSVEYSLTDLGQDLVPAILAIVDVGHRLKNRDQCSATS
>gi|56696084|ref|YP_166438.1| glutathione S-transferase [Ruegeria pomeroyi DSS-3]
MKLYYKPGACSLASHIALIEAGESFELEQVDTAAGTTASGGDFRAINPKGYVPALVLDGGETVTEGAAIL
QLIAERNPDAGLVPQGGGLGRTRVQEQLNFVASELHKAFGPFFSGKPLEGEARDAAVERVNGRMQLVEAM
LADGRDYLNGAQFSVADAYLFVVTNWANFLGLSLDGVPNLKALVARVAERPSTRAAMQAEGLLG
>gi|56696085|ref|YP_166439.1| hypothetical protein SPO1192 [Ruegeria pomeroyi DSS-3]
MSMTTEEASFAAVQAVIGTYFDGLHHADSARLRQVFHPQAIYACATGGDWLYRDMETYFAVVDQRVSPAS
KGEARRDRIQSIDFAGPDTARAVVNCAIGDSYFTDFLTFVRQDGRWQILAKVFHSEPL
>gi|56696086|ref|YP_166440.1| 4-oxalocrotonate tautomerase family protein [Ruegeria pomeroyi DSS-3]
MPYVNIKITREGATPAQKAELIAGVTDLLKQVLNKNPETTFVVIDEVEMEHWGIAGLPVAEYRQRKAG
>gi|56696087|ref|YP_166441.1| cell division protein FtsW [Ruegeria pomeroyi DSS-3]
MHQIRRKPGTKTPNRGANEAASGSGVMTEMVYGAVPERGGEPILPKWWRTLDKWSMSCVLILFGIGLLLG
LAASPPLAARNGFDPFHYVQRQAFFGGLAIVAMLLTSMMSPVLVRRLAVLGFLGAFVALALLPIFGTDFG
KGAVRWYSLGFASVQPSEFLKPGFMVVAAWLFAASQEINGPPGRLWSFALCVAIVLMLVMQPDFGQACLV
LFGWGVMYFVAGAPMLLLMAMAGVVVLGGMVAYSSSEHFARRIDGFLNPDVDPTTQLGYATNAIREGGLF
GVGVGEGQVKWSLPDAHTDFIIAVAAEEYGLVLVLIIIALYASIVVRSLLRLMRERDMFLRLAGTGLACT
FGVQAMINMGVAVRLLPAKGMTLPFVSYGGSSLIAGGIAVGMLLCFTRTRPQGELGDLLRGRG
>gi|56696088|ref|YP_166442.1| undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase [Ruegeria pomeroyi DSS-3]
MTRKYLMIAAGGTGGHMFPAQALAEAMLRKGWRVRLSTDARGARYTGGFPHTTEISQVSSATFARGGILA
KAMVAPRIAAGIAATAWEMRRDRPDVVVGFGGYPSIPALGAATLLRLPRMIHEQNGVLGRVNQLFARRVA
CVACGVWPTDLPEGAQGVHVGNPVRAAVLERAGAAYIPPGPYPMSILVMGGSQGARILSDVVPGAIAALP
EELRQYIRVAHQARDEDGARVTEFYAAHGIDAEVQPFFHDVPRRMSEAQLVISRAGASSVADISVIGRPS
ILIPFAAATGDHQTANARALTGANAAILIPERALDSAALAEQIAAVLTHPDAALQMANAALSTGAPDATE
RLVGLVEQLAEKETP
>gi|56696089|ref|YP_166443.1| UDP-N-acetylmuramate--L-alanine ligase [Ruegeria pomeroyi DSS-3]
MTPATKLPQDVGPIHFVGIGGIGMSGIAEVLLNLGYRVQGSDLKGSKITERLAGLGAEIFEGQRAENLDG
AAVVVISSAIKPGNPELDGARAQGLPVVRRADMLAELMRLKSNIAIAGTHGKTTTTTMMAELMVAGGFDP
TVINGGIIHAYSSNARMGQGEWMVVEADESDGSFNRLPATVAIVTNIDPEHMEHWGSIEALRQGFYDFVS
NIPFYGIAVCCTDHAEVQALVGRITDRRVRTYGFNAQADVRATNLTYKGGVAHFDILLQHEDMVIEGCTL
PMPGDHNVSNALSAVAVARHLGMKADEIRAALAAFGGVNRRFTKVGEVNGVTIIDDYGHHPVEIAAVLKA
ARQASEGRVIAVHQPHRYSRLSNLFDDFCACFNEADVVAIAEVYAAGEAPIPGADRDALVAGLIRHGHRH
ARAILSEEDLERLVREQTRPGDMVVCLGAGTISAWANGLPDRLKG
>gi|56696090|ref|YP_166444.1| amino acid permease [Ruegeria pomeroyi DSS-3]
MLHRRGIMAAPLKRRIGLGLLTAYGVGVMVGAGIYVLVGAVAGDAGVWAPVAFLLAGLIAAPTALSYAEF
STRLPEAAGEAAYVGTGLNSQSLALLVGLAVVVAGTVSAGAVLRGGVGYLSAVTEINPVWAMIGLGGALT
LVAVAGVLESLALAAVFTVVELAGLALVVWAGLGADPSPDWVAPAPPVWTGIGLGGVLAFFAFIGFEDIV
NMAEEVEAPERTLPRAILISLVVTSVLYALVAWAAVRAVPLDVLGQSESPLALVWQYGRGSGAGFLSAIA
VFAALNGILAQIVMATRVLYGLGGRTKALALFHTAHPRFGTPVLATFLVGAAVIFCALYVPVETLAETTS
SILLAVFALVNGALIVQKRRAPEARFRVPMAVPVLGLVLSLAALSVAVRGIL
>gi|56696091|ref|YP_166445.1| hypothetical protein SPO1198 [Ruegeria pomeroyi DSS-3]
MSLSLILAALWAVIANVLAMLPSRDHHWRRAYVLIALGIPLVGFVTYENGPWIGLVVLAAGMSVLRWPVI
YLGRWLRRPRA
>gi|56696092|ref|YP_166446.1| hypothetical protein SPO1199 [Ruegeria pomeroyi DSS-3]
MRDLGIGGGGVSDELLIYVIPTLLGLGAALLGRWMARKGGWRRVLSLAMIASGALAGLMLYADSLDDPWA
AIGVAALAALGVGPVILGLVLGGFVGWVGWRRGG
>gi|56696093|ref|YP_166447.1| UDP-N-acetylenolpyruvoylglucosamine reductase [Ruegeria pomeroyi DSS-3]
MIDTSAIRGKLTPNRDLSELTWLRVGGPADWLFQPADIDDLQTFLRMLPADIAVFPMGVGSNLIVRDGGL
RAVVIRLGRGFNAIDVAGDTVTAGAAALDAHVARKAADAGVDLTFLRTIPGSIGGAVRMNAGCYGSYTAD
VFRSAQVVLRSGELATLGAAELNFRYRQSDLPEGAVLVSASLQGVPGDPEALHARMQAQLDKRDQTQPTK
ERSAGSTFRNPAGFSSTGRADDTHELKAWKVIDEAGMRGARLGGAQMSEMHSNFLINTGGATAADLEGLG
EEVRKKVYDTSGITLEWEIMRVGDPLDG
>gi|56696094|ref|YP_166448.1| D-alanine--D-alanine ligase [Ruegeria pomeroyi DSS-3]
MGMSSRTNPKVAVLMGGPSAEREVSLVSGRECAAALRGEGFEVVELDAGSDLCDRLRASAPDVVFNALHG
RWGEDGCVQGLLEWLRIPYTSSGVLASALAMDKERSKEAYRAAGLPVAASQLADRAAIEAAHVMQPPYVV
KPYNEGSSVGVYIVTEAANGPPVLAPDLPATLMVEEYVPGRELSTTVLGDRALNVTDIITDGWYDYHAKY
SPGGSRHVIPADLPPEIFELCLDYALRAHKALGCRGLSRTDFRWDESRGAAGLFLLETNTQPGMTPTSLA
PEQALAAGMSFGQLCAWMVEDASCDR
>gi|56696095|ref|YP_166449.1| cell division protein ftsQ [Ruegeria pomeroyi DSS-3]
MRSLSRILLPVRFRPQLPAGQDAAFDSGAGQVPPLAEAMRLDGLARLKPAPKRSDPAPSRLSYRVQRWML
TPGIRLGLRIGVPFCLIFALGSGFLASEKRRDALNAFVADIRASIQDRPEFMVNLMAIDGAGTHLAADIR
EVAPIDFPISSFDLDVEQIRQVIAGLDPVKSATVRIRPGGVLQVDVIERQPAVVWRTRAGVEMLDETGAH
VDDLPERGARPDLPLIAGEGADAHVAEALRLIQAARPMGDRLRGLVRVGERRWDLVLDRGQTIQLPAKRP
VPALERVLAVNEVQELLDRDVAVVDMRLGTRPTIRMTEAASAEWLRVRNTGGNGQ
>gi|56696096|ref|YP_166450.1| cell division protein FtsA [Ruegeria pomeroyi DSS-3]
MMTDLYQSQRAMRQMRQQAIQRGVVAILDVGSSKISCLILRFDGSGRLSEDSAIGSMAGQTGFRVIGAAT
TRSRGVQFGEITAMQETERAIRTALQAAQKMADIRVDHVIACFSGANPRSYGLDAKVELETQVVTESEIG
RVLNACEVPEYGAGREVLHAQPVNFALDNRSGLIDPRGQLGQSLAVDMHMLTVDATAIRNLAHCIKRCDL
ELAGVANSAYVSGVSALVEDEQELGAACIDMGGGTTSISIFLKKHMIFADCVRMGGDHVTGDISMGLGVP
TANAERIKTFSGGVHATGADDREMIDVGGDTGDWEHDRRTVSRAELIGIMRPRVEEILEEVRARLDAAGF
EHLPSQQIVLTGGGSQIMGLDGLASRILGQRVRLGRPLRVHGLPQSATGPGFSSAVGLSLFAAHPQDEWW
DFEVPVDRYPARSLRRAVKWFRDNW
>gi|56696097|ref|YP_166451.1| cell division protein FtsZ [Ruegeria pomeroyi DSS-3]
MTLNLSMPGQDELKPRITVFGVGGAGGNAVNNMIEKQLEGVDFVVANTDAQALQQSHAPSRIQLGVKVTE
GLGAGARATVGAAAAEESIEQIVDHLAGAHMCFITAGMGGGTGTGAAPIIAQAARELGVLTVGVVTKPFQ
FEGAKRMRQAEDGVDALQKVVDTLIIIPNQNLFRLANEKTTFTEAFSMADDVLYQGVKGVTDLMVRPGLI
NLDFADVRAVMDEMGKAMMGTGEAAGEDRAVQAAEKAIANPLLDEISLNGAKGVLINITGGHDLTLFELD
EAANIIREKVDPDANIIVGSTLDTSMEGAMRVSVVATGIDAVDVQHDMPVPRRPMNAPLKQRVAAEEKPA
PLTLEQPAAPQPVAEAAEEPSLFEGMDVEQVAAHDLGEDILDTGDEPELLDDDGLPPPAYQPQVPAFEPR
AYVEEEEAPVETFVAPRAPAPGTPSPEAMRRLQAAAQKAPSAPQQGHRALQQPVGDKPRFGFNRLIDRMT
GHAPDTPADRGPAVARKQPVMRPSDATAPAHAEADPDQERIEIPAFLRRQAN
>gi|56696098|ref|YP_166452.1| UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [Ruegeria pomeroyi DSS-3]
MQHTLKTSVTFQGIGLHGGKPVRMTLRPAAAGHGIWFKRTDIEIGDAMIPAIYDLVDRTPLCTRLVNAAG
VSVSTVEHIMAALAGCGVHNALIELDGPEVPIMDGSSVEFVRGIMARGVRQQAAPVLAYEVLKAVTVEKD
GARATLMPSDGLEIEFTIDFEDAAIGRQTRRMNMRNGSFARELSDSRTFCRRSDVEAMRANGLALGGTLE
NAVVVDGDEILTPGGLRHTDEAVRHKMLDALGDLYMAGGPILGCYVGDKAGHALTNALLRTLFETPGAVR
PVLCTPEQAARLPGQGLIWSEIPQVA
>gi|56696099|ref|YP_166453.1| competence lipoprotein ComL, putative [Ruegeria pomeroyi DSS-3]
MIGSRAGARLVGALLLATFLAACGGGGFRTAADRSQNLDGYTPEQIFERGEYELSAKRTEDAAYYFSEVE
RLYPYSNWAKRALIMQAFAYHSGKDYPESRAAAQRYIDFYPADEDAAYAQYLLALSYYDQIDEVGRDQGL
TFQALQALRTVIEVYPDSEYATSAILKFDLAFDHLAAKEMEIGRYYLRRQHFSAAINRFRVVVEDFQTTT
HTAEALHRLVEAYLSLGLEAEAQTAGAILGHNYQSSEWYEASYKLLTARGLKMRDVGNNWLSQIYRQSIK
GQWL
>gi|56696100|ref|YP_166454.1| DNA repair protein RecN [Ruegeria pomeroyi DSS-3]
MLRALEIRDMLIIDRLELNFRPGLNVLTGETGAGKSILLDSLGFVLGWRGRAELVRQGAEQGEVMAEFDL
APGHPAHAVLADAGLPGGDTLLMRRVNTADGRKTAWVNDRRCSGEVLRALSETLIELHGQHDDRGLLNPR
GHRAMLDTYAGLSAELEAVRAAWTAQARARKTVAATEAALEAVRAEEEFLRHAVGELDALDPQPGEEGEL
DARRRLMQGAERIRDDVARAFALIGNEGAEGAMSDAIRWLDGVVDKAEGRLEAAVSALGRALIELGEAQS
GVEDCLDALQFNPAELEQIEERLFAIRALARKHGVAPDELGGFAETLRGKLAALDAGDADLAAQRAALAK
AEAAYEAAAAALSQARRASAGELDAAVMHELAPLKMERAVFQTRITEGEPGPEGRDAVAFEVATNPGAPA
GPLNRIASGGELSRFLLALKVCLRGDDGGKTMIFDEIDRGVGGATADAVGRRLEALAGAGQVLVVTHSPQ
VAARGVHHWRVQKRVEAGMTLSTVVALSDPEREDEIARMLSGDTVTEAARAAARALLDA
>gi|56696101|ref|YP_166455.1| voltage-gated chloride channel family protein [Ruegeria pomeroyi DSS-3]
MPSLRLRAVLVRTKDLRECVMTQSTRTVLVQQFLQAKAEIGDAWQVLRHRGPSQVQFWFIALAIGVAAGV
AAVAFRKGINALQSVLYGNEDVRLLHSHAEHLPWFWLLLIPTLGGLVVGLILHKTTPDGRVRSVADVIEG
AALTDGRVEMRAGIGSMLASLITLSSGGSTGREGPVVHLAGVISTWVCRRINADGITGRDLLGCAVAAAV
SASFNAPIAGALFALEVVLRHFAVHAFAPIVIASVAGTVINRLDRGDVTEFALNTPGALQFYVELPAFLL
LGLVCGLVSLLLMRSIFLAEDLGTHVQNSLRMPRWLRPAVSGALLGLLAIWFPHIIGVGYETTILALSGE
LALGTAILFAVIKTVALALTMGGRMGGGVFSPSLMIGALTGLAFGLIATRVLPDVSGTHALYAFAGMGAV
AAAVLGAPISTTLIVFELTGDWQIGLAVMVSVSMSTALASRLVDRSFFLTQLERRDVHLAAGPQAYLLAM
LRAGAVMRPLGDPRCLDRAGCEALIAEGVCVPASATLEAAMPWFDRDEHPCIPVVVREEDGRETPVGALY
HIDALKAYNRALAATAAEEHS
>gi|56696102|ref|YP_166456.1| MlrC domain-containing protein [Ruegeria pomeroyi DSS-3]
MKVLIAGLATETNSFSPIPTGRLAFEDSFVSRTATREPANLFSAPQHEWRAMAEARGWEVVESLSAFAQP
AGPTIRSTYEGFRDEILADIEAAKPDILLLSMHGAMIAEGYDDCEGDMLVRARAILGPSAVIGLEIDPHN
HLTEDMLGAADLIVSYKEYPHTDGHLRARELFTLAADTAAGKIRPVMRDYDCRMITMFHTTRAPMRGFVD
EMQARENTGGILSLSLTHGFPWGDCERVGARMLAIADGDAELAETVAREFGEKLWSLRDQLRGDWPSIPG
AIDHAVAANKTPVVLADFADNAGGGAPADSTFVLREILGRGLRDAAIGIFWDPVVVRMCQDAGVGAQMQV
RLGGKIGAMSGDPLDLKVTVRGLREKMTQKMGEGQMPMGNGVWLETEGVHIVVSDRRTQAFHPMCFTDLG
IDLSDMRMVVVKSSQHFYAGFAPIASEVVYISGPGAITPDYANIPYTKRDSNYWPKVEDPFA
>gi|56696103|ref|YP_166457.1| oligopeptide ABC transporter, periplasmic oligopeptide-binding protein [Ruegeria pomeroyi DSS-3]
MLNSSRRGALRSAVGAMVIGLGLTFSGSATQAETVLKAVPHSDLKILDPIWTTAYITRNHGYMVYDTLFS
LDAQGNIQPQMVDTVTTSEDGLMVTMTLRDGLVWHDGAPVTAADCVASINRWGSKDAMGQKMMSFVESLE
ATDDKTITFKLSTPTGLVTLALAKPSSNVPFMMPERVASTPSSEQIADYTGSGPFVFRQDLWEPGTKIVY
EKFDGYVPRSEPASGLSGGKIAKVDVVEWLPIRDHQQAVNALKAGEIDFIEAPPHDLLPLLKDDPNITLD
DFNPAGNQFTFRFNVLHPPFDNPKMRQALLYAFNQEDFVQAVVGNEEYYELCLALFGCGLPFESTAAMDG
LLESNFAKARELIAESGYNGEPILLMHSTDLAVLTNLAPVAKDLMEAVGLNVDMQSMDWQTLVARRSKRD
APADGGWNAFITSWTTGDLFNPVAAAFLNSSCDTALFGWPCDTRIEELRDAFARATSVEEQKKIVDEVQA
AWFDYPTHIHLGQWTSRAAMTNNVSGLLQTGAAVFWNLEKN
>gi|56696104|ref|YP_166458.1| oligopeptide ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MVSYLLRRVLATIPVMLLVAVFIFLLLRLTPGDPATIIAGDYANDEQVAQIRENLGLDKPVVTQFFVWLG
NIAQGDFGESFFYKKDVSELIAARLEPTLSLSLLTIVLTVSIAVPLGTLAAYRQGSWVDRGIMGFSVLGF
SLPVFVIGYALIYLFSIQLGWLPVQGYQRIGEGMGGWLYRLILPSCALSVVFVAFIARMTRTSVLEVLGE
DYVRTARAKGQTETRVLVRHALRNAAVPIVTVIGLSFAVLIGGVVVTESVFTIPGLGLLTVEAVLARDFP
TIQAVILLFSFIYVLINLIIDVSYTLLDPRIRY
>gi|56696105|ref|YP_166459.1| oligopeptide ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MSTTAISPAGQTVRRMFRNSSVIVGGVLVLVITLMALLAPALGTRDPSAISPKDRNQPPGFEATVRDRET
GQKVTVEYKLGTDTLGRDVYSRIIYGARISLVVGLAVAAIAIVIGMAIGVLAGYIRWLDGIIMRVMDGLM
AIPAILLAIAVVSLFSAGLLSVIIAIVVPEVPRVVRLVRSIVLSIREEPYVEAAITAGTRTPTLLVRHVL
PNTIAPLIVQGTFIVASAIIVEAILSFLGIGIPPEIPTWGNIMAEGRTVFQLYPHNILYPGVILAITVLG
VNMLGDGLRDTLDPRFAKRV
>gi|56696106|ref|YP_166460.1| oligopeptide ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MRNGYRVEPMVDHKYALEVDGLTVSLPTNADRPNAVENISFTVAPGEIVCVVGESGSGKSVTASAVMGLL
PDALRPIAGRTLLEGEDTLAADKNRLRDLRGTRMAMIFQEPMTALNPVTRVGEQIAEVLEIHTTMSAAER
RQRAIEVMESVHLPDPERMVDSFPHQLSGGQRQRIMIAMALVLDPILLIADEPTTALDVTTQAQILKLIK
EMQERRGTGVLFITHDFGVVAEIADRIVVMQNGRIVEYGDRDEVLQRPKAPYTQMLMRSVPSMTPPDRSA
KTDKTAVEVTALNKVYGRTGWLSKDRIVHAVQDVDLQVRKGETLGIVGESGSGKSTVARCIARLIDPTSG
SIGLHGAEIAHLTQGQLHPYRRKVQIVFQDPYRSLNPRRTIGQSLIEAPMNYGMTRDQALTVARDLMELV
GLSGDALDRYPHQFSGGQRQRICIARALAVEPDILIADEAVSALDVSVQAQVLKLLDDIRVKYNLAMLFI
THDLRVAAQICDRLIVMQKGVVVEHGPTRQVYQDPQHAYTRLLLEAAPGQGMRFGSQIQPTVAQGS
>gi|56696107|ref|YP_166461.1| hippurate hydrolase [Ruegeria pomeroyi DSS-3]
MKILPAIEQSRSELETIFKDLHAHPEIGFTETRTAAIVAEKLRAYGVDEVHEGIARTGVVALIRGKGDGN
RRIGLRADMDALPIHEETGLAYASTRPGIMHACGHDGHTTMLLGAAKHLAETRDFSGTAVLIFQPAEEGL
GGARGMLADGLFDRFPCDEVYGMHNWPNGTPGKFRIVKGAAMAGASFFDIHIKGKGSHGAMPQDSRDPLI
VASALVGQIQTIVSRNIPPLDACVVSVTQIHSGSAYNVVPDTATLAGTIRYFKDEVCALAEQRMQELCDG
LAAAYGVEIRLELRNIFNVLENDADLSDAYMEAACDIVGAENVIERKEPVTGSEDFADMLRAVPGAYCTL
SHAGNVPVHNPGYVLDPEILPVGASILARIVERRLSPAA
>gi|56696108|ref|YP_166462.1| carboxypeptidase [Ruegeria pomeroyi DSS-3]
MPYLDLPFDADAMLAGLKPWIECESPTFDAAAVNRMMSLAAYDLSQMGVVERIPGRMGFGDSLRVRLPHP
RAGEPGILIAGHMDTVHPIGTLAKLPFRREGDLCYGPGIQDMKGGNYCALEALRQIAAAGLHTPLPVTVL
FTPDEEVGTPSTRELIESEARRNRYVLVPEPALPNGGVVIGRYAIARFNLRTTGRPSHAGARLAEGRSAI
AAMARRILDIEAMTGADCTFSVGVIHAGQWVNCVSSSCEAEALSMAKRQEDLDDGIARMLALAGEADDVL
FEVTRGVTRPVWQPNQPGTMQMYDLAREIAGEMGVELPCDSAGGGSDGNFTGALGIATLDSLGVRGKGLH
TLTEHIEVASLPERARLMAGLLLRLE
>gi|56696109|ref|YP_166463.1| hypothetical protein SPO1216 [Ruegeria pomeroyi DSS-3]
MLGREGHMWIIAILCIGTLLVWYSNKRRGQRFVRAVHFLDLLDSGANTDEANGKVARLFTKHSTSETDVA
AIEYAMDKANRMTDGKQLLWIDEARQRGFAIDSGDTRFDMAHLSQAQAQTNRPQDFAADFSEGQSTTAPG
GSFPHAPSGLADAYHAGLEKIEANKDALRSALQAIIFTGARWGVRGAMAGFVFGLIVPRLGVLSYYEIWA
VPIVVAFFAAMAGVALGSVYGLLRWVFTG
>gi|56696110|ref|YP_166464.1| DNA-binding protein, putative [Ruegeria pomeroyi DSS-3]
MTKTLRTPEHVYLCQRLRQARLDAGLTQADLAERLDKPQSFVAKVETRERRLDVIEFAKWMAACEGLDVV
SEIVATIAEGRAQA
>gi|56696111|ref|YP_166465.1| phage integrase family site specific recombinase [Ruegeria pomeroyi DSS-3]
MKLSAYLSPSRHGIFYFRWPLPHSGREKRSTVKVSLRTRCPHRAADLARCLAAHGRIVRDSNALAGLRQT
EIREKVQAYFKAQLDQYLDWLDQRGLSKNALTDAREEMLDHESLLELETTSPMWLPISRFKRVMDVSDEQ
WDASQPRITYQLRKGRRDMLRRVLEAAEGLERYSYDDAPAIAPAALEALPAAPSVTLEQAIADYMDEHAH
RWDEKYTDQIQAFLNILIEYCGADRQLATITKQDAQEIKKVVRALPQNRHVKPELKSLSLCEVIQVAGHP
KISITTVNNHISNFIRFFKWAKNNDYTPHALFEGMKMAKAKASETNRKPFSPAQTQLMYRELTENTSGLV
RKDSHRWGALLGMFTGARLNEICQLLVSDIQQDQGIHFLNIDDEGDERKRVKTRASKRKVPIHPELIHLG
FLDFVESRAQHDRLFFDFEYNRNGGYGRSLSRWFNENTFLPKLGIKSRELVFHSFRHTMVTRLSQAGEAE
PLVKCIVGHERSGVTQEVYFREGYTLVQLKAAIDKFKIA
>gi|56698711|ref|YP_166466.1| phage integrase family site specific recombinase [Ruegeria pomeroyi DSS-3]
MRVRLTDLAVKKLPLSENGQVTYWDELTPNFGIRCSTRSKSYIVLLGEKRRRKTLGRYPDLSLADARKQA
KQLLSANAMGEGQVTPHAPVVAFEEAKARFLKDCEGRNKPRTVADYRRLLNRHFNFKGDVREVYRQQVMR
VVSGLSATPSEQSHAYVAIRTMMNWCVRHGLVDHSVVPPMKQKTSERDRVLSEDELRKVYLRAQETPFAF
GPIVQLLILTGQRRTEIGQMRRSWISHGEVAFPKGFAKNKREHRFPLSPLSQQVVADLPNTGDLLFPAAT
DFEKAFTTWAWHKKRFDEGLEAVEPYTLHDLRRTFATIHAKIGTPIHVTEKLLNHVSGTISGVAAVYNRH
SYADEMRHAASQFDTYLTELALTPT
>gi|56696112|ref|YP_166467.1| hypothetical protein SPO1220 [Ruegeria pomeroyi DSS-3]
MHIPDIDFRLAVALYAALLSTFVFIRSVYRRAKFVYDFDSHSSAKRLTLTAYSQSSQEVFVHKIIVVGDL
VKEVDIFEFLKPFEVKVWSFDENVVNVNNVMDVKVVAAGRTRKAGRAE
>gi|56696113|ref|YP_166468.1| hypothetical protein SPO1221 [Ruegeria pomeroyi DSS-3]
MHRMNPLSDKRRYRLSDRLSGTLPAKFEGLLDRRFYPYFDYLLDSQHSPEEQSDFYEVYVNNPEIEEKLR
RRVSSPTTHITALTGARGIGKSTTLRYFFGVSTQPKLKSLKEIFPGQTGRGVKTVIVPFYLDTYGVPEGG
KLSDAKIRSILTSQIQAAAELIYRTYNVEVSDEELFDFINTHKSQLVTFPELGLKPTPRARIERFRSADV
YAYTTELLKFGLHNSDIERVILIVDDIESCSFESQKNIVKGIMRLRDCLKNFGDLPRTYVPDYIFTCRPA
TFNLLKSHPEVDGYSIGHSINFNKPASIAEVVSRRFDYAKKVLGEGRAPNAMGTLGNVKNLETWREAYRA
FEAIINSVASVNEAFIANLCNHDLRRALIDLQGALRNSRWYERETHSQGAFKITEDKYNFSTAGIIRAFV
LRENEYYSEEVDTVLPNLFFNHERDEIDLMVLHILKFCFEQTRSKRITAIPLSRISDALKIPYRVEVVKN
HFDEVLDYMISTEIVRQEMVKMPGDRTRMRYIIPMNKGFALWRACRSTSVFLEFFRDNTFMFHNSVGTFQ
KGRTIGTSRLDSEHKFIFTAEFISEVAGSESKIYRFINKYRDMQKYREVFGTRFISRPLLWGFRDSLRRH
YGLARYNSDLPTDVKIALSRAERDVSRVKR
>gi|56696114|ref|YP_166469.1| resolvase family site-specific recombinase [Ruegeria pomeroyi DSS-3]
MKPCFGYIRVSTERQGDGASLEAQKDAITGFASQNNLEIVRWFEERETASKTGRPIFGEMMNALVSGAAE
GLILHKVDRTARNFSDWSRLHEVAKLGIDVYFAADSLDFGTRGGQLLADIQMALAADYSRNLSQEVKKGI
YGRIKNGVYPFRAPLGYLDTGGGNVKAIDPIKAPLVSQVFELYCSGDYSITSLTEEMQRRGLKGVGERPV
VRRNIESILRNPFYCGKMLVRGKLYDGAHEPLISTAQYRRVAAIKAQRFVKKSTKHELLFRGLFTCGACG
QVLTGERQKAHVYYRCHTPRCGRGAIREDRLEETLREKLARLEISPEDQVTLESDIRAWLNKDGVKDIEK
SLRLRISDATARLDRLTDLLVDGAIDKPAYELRKQNVEFEKQQLREELDALERSRAEEKDLKALLALAAD
LSSLYDAAPPPKKRELIRNCLVAPCVMDGQLVSHPADWLVSLRKSPKTDEKSHSAPQAILEGVRVMHAVV
DVMP
>gi|56696115|ref|YP_166470.1| hypothetical protein SPO1223 [Ruegeria pomeroyi DSS-3]
MRLGPWRHRRRMGSGHRSFPKHQWRQAMTLMLHAGASPLDYDGLRQLETPEATSTHVPIPHHRLVDVVRL
TLGFYGHTVEEEHHGVTPDGMRYFGVLSLRSTYGDYTDTVGLRNSHDKTFPIGISFGSRVFVCDNLAFIA
DHVVRRKHTAQAKRDLPGLVGDLIEPLADQREAQHRVISRYRAANLSQSLVDHAVLELYRAEVITVTRIA
AVMERWENPPHDWGVKTAWRLFNCVTHALEGRIAEQPALTSRLHDVIDATCLNGNATVSAELAAQ
>gi|56696116|ref|YP_166471.1| hypothetical protein SPO1224 [Ruegeria pomeroyi DSS-3]
MHFHPDHVTTLGQAHYRYGDFPFGIRLADRLMHLYIIGQTGTGKSTLLANLARQDAKNGIGFCLVDPHGD
LAAGLVEMLDTPGIYWNVADPVSPYGYNPLTRVGTDHRPLVASGFIESLKKQWKDAWGARMEHLLRYAVL
ALLEQPSADIRDIVRLFVEKDFRRSVVARVTDPQVFAFWTKEYPNMNYQTAVDGVAPIANKLGAFLANPT
LRRAICEPEEPLRFRRIMDDGQCLIVNLAKGRLGSDNANVMGGLIVSSVLNAAFTRHTVPEHERRPFFLY
IDEFHSFTTSVFAGMLAEARKYGLGLVLAHQHIVQTDREVFEAVIGNAGSLVVFRVGAQDAPTFHRQLGT
VEIPDLVNLPNYRAFIQLMVRGERVGTFSATMDPPLQ
>gi|56696117|ref|YP_166472.1| hypothetical protein SPO1225 [Ruegeria pomeroyi DSS-3]
MARVIPTCAPEKEVIMGILQDDDVGDIGAVPVCKSCGSERVALDAWACWNPDSGLWELENVFDDAHCHAC
EGETTMVWKRLDGAAPRQAIRELNDRFRREGLGNGSVMVTSGVQAIGAEFVLKAVQTVRTFDQFSEDNDP
WGEHDFGAVEVDGERVFWKVDCYDPTLTQGSENPANEAVTHRVLTIMLAGEY
>gi|56696118|ref|YP_166473.1| putative lipoprotein [Ruegeria pomeroyi DSS-3]
MFRSIALFSFFMALVTTQGCSEDISNSETHNSASPMSNSQSGKFSLSNNGKVGCTIEFNGEIELGETDRM
MAFFKSLADDNPFDASFFNGAGFSNPSRYSEMKTEYGFEFFWEDGELTLLNQSGLSICLNSSGGSFSEAV
QMYDAIKGLGLGTVVPERARCLSACAVVFLGGRMKHWTTMGGNLVTQKRRSLHATAELGVHAPSIEFELD
ELDEALPPEVLSELITSSYSAAVNENAQLISRLSDNELPILRRILATSPETMYLFNTVERTLEVEMEILG
IRVPKSVVANHVKSSCENAALAFIGIASNYEQLGHPRNVGPWHWQCEKPSLDTYSVKSARVLETARTNSG
LIAGIMDMPSIECWEPGHRNYCIAVYSEILNEESPPALEGYGVSVGFWFQENGRPTSLADFVESSQAESE
DTAAPFFVWDGGSELLYSPSTQLRKVSE
>gi|56696119|ref|YP_166474.1| hypothetical protein SPO1227 [Ruegeria pomeroyi DSS-3]
MTTEFALDLSLARRKAGFVQSDIAHLMASHQSRVSELEHGGKLPTLTEIVTLSLIYGRSFESLFSMIMAD
ARQDLQKRVGTLPKDVRNFVGTFNRSASIERLRDRLAAEETEHGGP
>gi|56696120|ref|YP_166475.1| hypothetical protein SPO1228 [Ruegeria pomeroyi DSS-3]
MAGLRMLSVAAASGRVGYVYLVGGSLMDWRTSSKAAESPSAAAEQTQKWINRLKPEVVVTEKPEAAAKKG
EKTKEIIGAIARTAEHNYVLDVSVKREHDFANKYEEAEALAERYPEIEAWLPKRRRFFDNEPRNTVLFEA
LSLADAVMRGGPTALGRAMG
>gi|56696121|ref|YP_166476.1| hypothetical protein SPO1229 [Ruegeria pomeroyi DSS-3]
MRAAISHHTVRKGLLLKTTYYEVHLSVAFTHEEKQIIRQRGLLKTKLLDRRPANAKNDARDDKFELRVGH
LMDERTDRFLCATPSQAKIYEENLLDVLGQMKVWLDDNAETGTRTVVEF
>gi|56696122|ref|YP_166477.1| hypothetical protein SPO1230 [Ruegeria pomeroyi DSS-3]
MVRGPVEEFGGLFLVFAIVGTLLMITVFVTPIAIAGIVAYVGYRLYTESPARLERIARQETETLYNHALA
GTVQLSDAEIDAALGQHWPVDLPASLRIQLLDVGRAIFEQEGLMPDVPPPPALCNTVEGARYRDMLARAG
QARSDRVMVMTALEIVSAALAPIANAVPPIEGDVLVEVTQFTHPLGQAVQNVIAPFFRDNDYMHFKALRQ
RLDANLTATHRTNPVFPVDYKGDDIVDTYLRGTYLKELFSLKTPFTIPEDRRFEHTHIVAGSGHGKTQTL
QYFIAKDLEAVSRGDKSVVVIDSQGDLLSTILMAKTLPPDRIVLIDPEDIQFPVSLNLFSVGQDRLENYD
PLERERLTNSIIELYDFVLGSLLSAGMTAKQSVVFRYVTRLMFHIPDATIHTLRELLEPDGTDTYRKHIE
KLEGTPRRFFETEFDSKEFANTKTQVLRRLYGVLENQTFERMFSHPVSKFDMFTEMNAGKLILVNTSKSL
LKEQGTEIFGRFFIALIAQAAQERATLPDYDRLPVMVYVDEAQDYFDQNIGIILSQARKYKVGMVMAHQY
LGQLTQGLQEAFEANTSIKLAGGVSARDARALAGQMSCDPDTIQRQPKGTFATYVRGLTERAVPISFPFF
VLEKMKKRSSEELGAIRDASRAAYAEPVSGTKSRDQDAPGDDGDGYGPGAEPMSNAQEDDVGDETEYNPS
YGTLGGTDPQNRKPEQSSQNEDDGDQGDIGWDELRKAMGPSFGKPNDKSGLKTAPLDPDDPANPVDKL
>gi|56696123|ref|YP_166478.1| hypothetical protein SPO1231 [Ruegeria pomeroyi DSS-3]
MVQPATDRLGRATFRHIAPKEDVRPNTREVRWLKHIERHGPQGSHYLYELTRDTHRCKDTTLRQMQKLRA
GGYLSLPHQQRATERAEFNPYIYDLTQKAEDHLFDLGIDEPTVRPTGHWWHSYMTSCVTSAIDIAALRAG
VRFIPAHEILAIKDVDLAIPIGRAHLIPDQLFALDYGGRYRAFALEVDRGTEPKTSPAKRKSWKRSIEQY
RQIIEKQRYKRHYGLNTNLLVLWVFNSRTKEARFLELMHQKPCAADRAFLTQSIYDDTGPSTERNLPTHL
FDRPWKRADGSAVSIRGV
>gi|56696124|ref|YP_166479.1| H-NS family DNA-binding protein [Ruegeria pomeroyi DSS-3]
MSNLNSMSLAELKSLEKKVARAIAKFEELEKKQALVALKAQAKKLGFSLSELTGAVAKPAKQQKPRKKVP
PKYANPADKSQTWTGRGRRPVWVVEALEAGRTLDDLEIKSGTPAA
>gi|56696125|ref|YP_166480.1| hypothetical protein SPO1233 [Ruegeria pomeroyi DSS-3]
MIGFQLFSLPNWLRAKPRQIPEPETHGSDASSQRTASDFATNIDRPVIDLYRPHILSGNCLIVTGYQDFL
SSLAILMNEVPELRTAEAASETRIRIAFGIDTGNAKRLGKPSPVSEEMKLFWLERSGLQVDDDEDLLAVL
AQHAISEGNIQLRVFDPGLAQEKLGISGERRLHSKIVSSPKGAVAGSANFSKSGLYRNIEYADGLDTGSH
DLQLERTQAAEQVWDVSVDWNTEALEILDKLIKPVTAEDAMARMISEQKGFEPWLTGQRQSITGHTLFGY
QQELTYEACSIAYDHGIAFVEAPTGSGKTEIGCHLAEALSETFSRVIPKSPVHGVSRKNTAVIAPPKVIP
SWERHSTNSLTAIANSKLSKQKLRGAGDHARSGLRLDQFGVLIIDESHTVTPGFEQASQMAAAIELAPPS
WNVCLSATLLGNRDVDWLAHMQEKRASIFMTPDYIQDMGELFQREMQKPMDIFDHGAPLAVLTEPDTALS
REARSELAALISPFLTRRQRHCIGESQDRTKHGYPVLANHGRPTSLKVTKRHEQLLEDIVELCRELAPGG
RVTAVEKSRFGHVRTQQSTQDQLHIRNLLNILRVNSAQASWEMSHGVIGKWLREFEGGSRARKSKSHANQ
SDMFSLLGIDQPGPTNTCDALGKKLEAKPFKELDERRYQACLDIQATKDRVVFLAERTDTLEIFAEALSR
KGQHTNFVVGNQTKGEDRAVKAIFGDGPDGFKRIVTGKSVEQFFRPGGRKAPKGPASVFMTYKMAEGINL
QSADTLVLLGVTSNLKELIQGLGRIDRIDSQFEIVNYHLVDVPVGQFASDEKIAQRIENYKTLSGEELID
AVQEEGSEDAEVILESVVEYLRAPRRLRSNNLHDVLSRTRLAITPARYELITKARIEGTWGAELALLSAR
ESFTALHLKGTDKPTSFLPPRLIILEHDKDGIQLVRGQVRCARTLNAAYERTKSLCQENAHMSMDQLTDA
LEVVSSQLGELTEWDLRPARVESLMKACAEFMNRLDRTGLDDQQRFGHLSLPAIEMICESWSRLLDPYWE
QAKQEVRDSFAYEDLPKGYIALQEVLTKLEQDSLRSPKVHDLMSDVIKEAELLSRDHEYEIGRRVSVVFF
SKGSGEH
>gi|56698730|ref|YP_166481.1| hypothetical protein SPO1234 [Ruegeria pomeroyi DSS-3]
MLVYHDMSDDQFEQVAVALGQRLFGPGLIGFAKGKDGGRDAKFRGTAQAYPSTASPWNGGTIIQAKHTTG
INASFSDKAFFNPETETGILADELARIKALIASGELDNYLVISNRKLTGITQGKLETYLHKETGLKKDQL
GFLGTSQLDDLFKLYPDALKSLDFRPLERPLIVRSDELAETIEAFGDALGDLEVPETKDLPEPRTPLDKK
NRLNNMSDEYAKKLRSLYLPVTRQIDVFLGDPKNDQFLEKYHDATEEFSLKIIEFQGAEDTFDSVFNYLL
DMLIDRSSVLRGNKRLTRAMLFYMYWTCDIGKNADA
>gi|56696126|ref|YP_166482.1| hypothetical protein SPO1235 [Ruegeria pomeroyi DSS-3]
MKLERLYSNLDHYFTPIEFNSGFNAIVAEIRLPENRSKSSHNLGKSTLARVIDFCLLGKVDKNHFFKKRE
DLFSEFVFFLEVQLFDDNYLTIRRAVDTPTKISFRRSDLDEPDLTSLEDEDWTHANLPLSKAQGLLDGYL
NFSDISPWKYREALGYFLRRQSDYDDVFKLQRHLGPDIYWKPVLARVLGLDAELFQKRYTMRNDIDQKEA
DLQTFERQSGASDEQLENADALLQLREADVERMQAELDQFDFAGADTDVTERLVEDIDRAIAELNERRYT
LTYNLSEIRNALKDDKIRFDPNKAKSLFEEAGILFPDQIVADFEQLIAFNRAITEERQQYLLEELQEISA
ESASIGRELARLNLQRRSALAFLRSEDVFAKYKEMSARISEINAEIRILRKQQEFRTSLQDKREELRALK
SDYSIQQGTAERHVRSVSLDSQSLLAETRKHFSSIIERVLGRKALLIVRVNSEGNLEFRADFVDANELST
SEGEGTSYRKLMCVAFDLAVLRAHLKGNFPRFVCHDGVFESLDPRPKQNLLDVIREYSDLGIQTVITLIS
SDAPPPEDGKTSAFEPGEVIVELHDDGADGRLFKFESW
>gi|56696127|ref|YP_166483.1| hypothetical protein SPO1236 [Ruegeria pomeroyi DSS-3]
MGLYRSTKESGHVGDYYGRARSLPRVVTANDVFSLRQKLKGHVLIIRSAVACETCSQVTTVRIGMGQGIR
QEHTIQCSKCSEPISFGMNVDYENLGTEVFAIENCSIVPSPAPGTGPVVNVDANFAIPENMADQDFTFHR
LNQMQEMVEAAKAFGPLPTAKFDPNAPRRPYSDFSSEWKQLKKAASLMANGHSKLALRRMKEASEEHYSN
QPLDSVSDWFIRFTMKLLGRKYQSRFKAVLKEFSEIRENHDVGPLFEHYEANMVEDRFVRYREIFTDFFS
RYEQFSQVIFRAALDLKLSDDLVASSVQFDAVKSFYGDAFEVFAGNVDLLAMMNNVKSGRDYDQFKELTL
DKYLKLDNSSKFNPFADNAVFAELCEERDNQLRNASHHKGFRIDGEGRKITYRAGKGGTGETQEISYAEY
LFRSVNLFLQICVLVCIELAVCSGSGIKLPFD
>gi|56696128|ref|YP_166484.1| hypothetical protein SPO1237 [Ruegeria pomeroyi DSS-3]
MEAMIWSLIPLKIENTRIQMPVGQGFFHAGWVGFPEAEEKFFYVYDCGAMNKFATARNREIKKLHAYVGE
GARLDLLVISHMHADHVNGVEALVTDGKLQVDTIMLPMIEMKERLLSFATTAHDDPASAESDFYREFIVD
PVAAVSRFDPRNILLVGRGDGGAPGSGSPGDSPLDGGSDLSGEGRGYTWKLVGQGIADFLSPDAGRPQIA
KIPDTSALRVFEFRNWQDAWLIAPYVDEEITAKNDLFISNLASELRIKVAELEGRLSSTSFVLDLVTNQA
DKLQSAYISCHGDLNRTSLCLYSGPVGSVAVDHRCQVQHGPWVSNLGHPRIAWIATGDAKLSKDAKCDAL
LEHFKDHLAKVSTLTLPHHGAAADFNQKLLTATKPSFCPVTADAVKNWQHPAASVTRSVASEGAMLLVVN
ADEATLVREDVWTGTP
>gi|56696129|ref|YP_166485.1| protein-L-isoaspartate O-methyltransferase [Ruegeria pomeroyi DSS-3]
MTDFATRRRMMVDTQVRPSDVTKFPIIQAMLTVPREAFVPDPQRDVAYADAMIDLGEGRAMLEPRTLAKM
LDAAAIGGDEMVLDVGSGLGYSAAVAARMAELVVAVEEAAELADEAQTLLMDNGADNAVLHQGPLAQGAA
EHGPYDVILIQGGVEQVPETLVEQLKEGGRIVAVFMEGALGTVRIGRKTAAGLSWRQAFNATAPVLPGFE
RERAFSL
>gi|56696130|ref|YP_166486.1| TolC family type I secretion outer membrane protein [Ruegeria pomeroyi DSS-3]
MLRTLTGRLSRMAVLAAGVAVIAIAPRPAVADNLADALIGAYNTSGLLEQNRALLRAADEDVAIALSALR
PIVNWTARIQTTYNRSGNAIASTTATPDTFFAGLELTQLLYDGGAARLGRQAAQETVLATRQALVQIEQQ
VLFRAVTAYLNVLLQEETVGIRQNNVRLLGEELRASQDRFEVGEVTRTDVALSESRLANARANLADANGA
LTTAHAEYINAVGRHPGRTTGQPAMPGLPRSEDDAAALALRNHPSLIGAQHQVRALDLVVGQQRANLGPN
VRFQAELGFTDDFGGTTFNDSASASVIYSQPLYAGGRLNASVRRAMAQRDASRANLLNVQRNVTQDVSNA
YVRFQTANASLTASAERVRAAQVAFDGIREEATLGARTTLDVLTAEQDLLDAQLARISARTERSLAAYQL
LASQGLLTAERLGLAVQIYDPTLYYNMVKDAPAAISKRSRDLDRVLEALGKK
>gi|56696131|ref|YP_166487.1| hypothetical protein SPO1241 [Ruegeria pomeroyi DSS-3]
MSDPAKNVEIEDVLSSIRRLVSEEGRATARPEAPAAAPKPGKLVLTPALRVAETIEPAEAAPLSLAEPVE
GTEESAPWTDPDATLFSAAAAAGALPVEAEAEPDDEVSSEAEPIVLAPEDLVEEIAEDVDEAEDEPPSEE
DADHDTAEPEEAEAEPEPELEPQPETEEPDWLSEIELEVEAETEKPTEDSLTARIEVLETMISQVDEDWE
PDGLSADAYSGTPGDAMAWQDHDSERLDAAPEPDEDPMDDDHAILSPDEAFLDEESLRELVADIVREELQ
GALGERITRNVRKLVRREIHRALTAQELD
>gi|56696132|ref|YP_166488.1| cobyric acid synthase [Ruegeria pomeroyi DSS-3]
MVRAIMIQGTGSNVGKSMLVAGLARAFTRRGLRVAPFKPQNMSNNAAATENGGEIGRAQALQARAARRAT
HTDMNPILLKPETDTGAQIVVQGKRAGTMRAGDYRKNKAHLLEKALESFDRLCGDADLVLIEGAGSPAET
NLRAGDIANMGFACAAGVPVVLVGDIHRGGVIAQIVGTQAVLEPGDLAQIRGFAVNRFKGDITLFDEGRD
DIARRTGWPCLGVVPWFNDAWRLPAEDMMDIRSAPGGACKVVVPQLERMANFDDLDPLAAEPGVSVEIIP
AGRPLPGDADLVLLPGSKSTVGDLAYFRAQGWDIDLYAHVRRGGHVLGLCGGYQMLGHSIDDPEGIEGRP
GRTEGLGLLDVHTVMTGDKQVTLRHATALPGREPVTGYEIHIGRTDGPDCARAWLEIDGRPEGAATPDGR
IRGSYLHGLFASDAFRARYLGELGHEALVGYEDGVEQVLEALADHVEAHLDLDLLLSLAEPPRRR
>gi|56696133|ref|YP_166489.1| hypothetical protein SPO1243 [Ruegeria pomeroyi DSS-3]
MTYFLHTTVDAPICAPISGGTAPGKTTTPSAASAASHAKFAVHPCKLKVPESCPIRHKERHAENCKSKNN
KEDEMKDFVDGTAFNNEQGNRARKLFAAVVLAALDDAIADDKKYGNGPEQIARWARSRDGREVLSCAGID
PNERVVRGLMEFVGRGVRTSVALSREESERRNAAQAEAA
>gi|56696134|ref|YP_166490.1| elongation factor P [Ruegeria pomeroyi DSS-3]
MPKINGNEIRPGNVLEHNGGLWAAVKVDHVKPGKGGAFAQVELRNLRNGSKLNERFRSADKVERVRLEQK
DQQFLYESDGMLVFMDAETYEQIELPADLLGERRPFLQDGMTILVEFYESEALNATLPQKVTCKIVETEP
VVKGQTAANSFKPAVLDNGVKVMVPPFVGQDEMIVVNTETMEYSERA
>gi|56696135|ref|YP_166491.1| ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MVQNHEGQDMVQLYAAIWRVSGRRQVMLIVLSLAIAALAAVPLEFQRDIVNLLTEQAVDLQHLFLLGAGM
GAAILASLALKFLTSFLSGTLGEHVIRLIRMRLVTRAAEGGHTLHQGTLTTAVSAEAEELGKFAGGAFAD
PVVQIGTLVSVIGYISSTQPGLGLIALSMILPQIAIVLLSQRQVNRHVAERVKLLRAAGNRLSEEDIAAA
VSELEQTFDQIYATRRSMFLWKLSTKFVISAINGAGTVAVLMLGGWLVLQGRTDVGTVVAAVTGLSRIQA
PTAFLIAFYRQVSANRIKFELLRDLFADRG
>gi|56696136|ref|YP_166492.1| aminomethyl transferase family protein [Ruegeria pomeroyi DSS-3]
MPSRRILRLSGADTDSFLQGLVSNDIRKLDQGLVYAALLTPQGKYLADFFLCRDDEGVLLDIAESLADAT
LKRLSMYKLRAAVEIGDSGLNLQRGTGPAPAGALPDPRHPTLGWRAYTPAPESDDGSDWDAIRVAHCIPE
TGIELTPDSYLLESGFEALNGLDFRKGCYVGQEVTARMKHKTELRKGLARVAIEGAAEPGTEITADGKPV
GVLHTRAGDHAIAYLRFDRAGGEMSAGEARLRRL
>gi|56696137|ref|YP_166493.1| glycosyl transferase, group 2 family protein [Ruegeria pomeroyi DSS-3]
MPAPLSIVIPTLQAESSLPRLLEALIEGLPNGLIREVIVSDGGSQDATRAIAEAAGAQVLNGPPSRGGQL
RHGCDAARGDWLLVLHADTLPDPGWAGVVADHIAAREDAACFRLAFRARGPGAAWVAGWANLRTRLFGLP
YGDQGLLIRRRDYQTAGGYPDQLLMEDVHLVRALSRAPVLLPHRALTGAERYLRSGWLRRGARNLWTLMR
YFAGTDPEALARAYRR
>gi|56696138|ref|YP_166494.1| paraquat-inducible protein, putative [Ruegeria pomeroyi DSS-3]
MSDAPQLRQPDIETRVARGWRGLSLVWLVPVVAVAGALALVWQSYSNRDIPIRIEFADATGIEVDKTEIR
FREVSVGRVSGMRFSEDLSRVIVEAEIHRELERYLDSDARFWRVTARVGPGGISGLNTLLSGAYIAADWD
AVEGEAARDFVAEAEAPAVPPGTKGLAVVLIAPDSGSVSVGAPILHKGVQMGKIAAVRYDALSGSVLLTG
FIEAPNDKLINSATRFWNVSGAGLELGEGGIQLKVDSLASLLQGGVAFDTAMSGGEALGKRPIFDLYATE
DSARDSLLGDSLQATVEVMSSFDGSVRGLKLGSEVVFRGVKVGQVRHLSAEIDESVEGKPDIRMQVIYTI
EPGRLGLHDVSTPDDTLSLLATMVARGGVRAQLMPASFFSGGLVVQLQENPDAPAATLDREATPFPIMPS
LPTPADTLAVASQNVLDRVAALPVEELMQRAIETLENVNTILADGDTRRIPADLRDMLGNVNAVAGSESL
RNLPEDLRQALASVNAVLAHFEEEEGAQKLVAALEELRTAATGISAASADLPALVRDIDALVAKADALPL
EQVVTSADQVLQTADTLLRSDDVERVPAALNAALAQAEQTLVSIREAAGSVNSTLSTFEEKKVAQTLVDA
LGDMRTAAANVETASAELPQLVADIDRLIATANALPLADVTASADRVLQSADAFLRNEDMDKVPGALAGA
LEEAQRALEELRQGGAVENLNRTLQTASTAADSVALAVQTLPDLAARLDALADSAEATIGAYGPGSPVNR
EVQAAIGDLRATVRSLNALVQAIRRKPNSLLVGR
>gi|56696139|ref|YP_166495.1| putative lipoprotein [Ruegeria pomeroyi DSS-3]
MRRLFALSLLALAACAGPEERYLLPEITGVETYRTSARTIQVTRMDLPAYVSDSEITLLGEDGVLRPTKT
GFWADEPERALTEMLAAGLDQALNASVAADPWPFEGLADIQVAVKVHRLSGVPGQALAFSGQYFLTSPAH
GHLERARRFSYAVPMSGETIPAFAAAQTEALRLLVNDIAKSIARG
>gi|56696140|ref|YP_166496.1| hypothetical protein SPO1251 [Ruegeria pomeroyi DSS-3]
MHTLGPMSLVIANQLPLILFCFLAGSLGTGWLLLRKPAGHRAWRLADLVWVVLGGVGALVAVLAGLYKAD
HSRLDRQIDIAYAATAAFDRDAARFRLRFCDPPFDPDIAVLCEKIEFLSASTASNSELPLFIAVTGEVAP
LAGLHLLFAGPGMRDMSDQVEAFAVDEFLVFATLDAPTEAALEAMRRKVPLIAGDFQILARAYEDLIAQV
GKLKTEWEFLQENAHILLIQVLALGLVSFAAPFRLGKSIIELR
>gi|56696141|ref|YP_166497.1| hypothetical protein SPO1252 [Ruegeria pomeroyi DSS-3]
MSKEKSRGNREAKKPKKVKPKILATAGMNKPTVLNTRDKAK
>gi|56696142|ref|YP_166498.1| DNA topoisomerase IV subunit B [Ruegeria pomeroyi DSS-3]
MPEDLLSGAQTATYDASSIEVLEGLEPVRKRPGMYIGGTDERALHHMVAEVLDNSMDEAVAGFANRIEVE
LHADYALTVRDNGRGIPVDPHPKFPGKSALEVILCTLHAGGKFSGKAYQTSGGLHGVGASVVNALSDSMV
VQVARDKLLYEQRFSRGLPLGPIQQIGAAPNRRGTTVTFHADEEIFGHHRFKPARLFKSIRSKAYLFSGV
EIRWKSAIDDGETPTEATFHFPGGLADYLKETLGKASTYAEQPFAGTVDFTEKFNTPGKVEWAINWTPSR
DGFIQSYCNTVPTPEGGTHEAGFWSAILKGIRAYGELISNKKAAQITRDDLLTGGCALVSCFIREPEFVG
QTKDRLATVEAQRLVEGAVRDHFDNWLAADTKSAGAILDFLVLRAEERIRRRQEKETQRKTATKKLRLPG
KLVDCSATSREGTELFIVEGDSAGGSAKMARDRKTQALLPLRGKILNVLGAASSKLGSNQEISDLTQALG
VGLGTRFNVDDLRYDKIIIMTDADVDGAHIAALLMTFFFTQMRPMIDTGHLYLACPPLYRLTQGAKRVYC
LDEAERDEWLAKGLGGKGKIDVSRFKGLGEMDAKDLKDTTMNPETRKLIRVTIDEDEPGETGDLVERLMG
KKPELRFQYIQENARFVEELDV
>gi|56696143|ref|YP_166499.1| hypothetical protein SPO1254 [Ruegeria pomeroyi DSS-3]
MIQPGTNERVHLMGNWQVKLDANKAIEQIDQLASRAWRAFQTPSTAVVVELLNETRYDLRHVCNYRWQGN
FMEPTDDLLAGWGRVWGMQSKGLDGCFGAVIYQLWDQGTETDAFLVIGNLIYWDGAMPHYTAEITTKNYE
NEGKPKTLDLLNDGRSSAWSKDYRDTGGVSLDLKVDIWRQEITSIEENFRIQLTNPS
>gi|56696144|ref|YP_166500.1| alkylhydroperoxidase [Ruegeria pomeroyi DSS-3]
MSLGAIRVHVRPVQMGQRGQSGMSWIRTVPFEEATGKLRKLYDRVTGPGGNVDNIMMVHSLRPHSMEGHM
ALYKNVLHHTGNAIPKWFLEVLGVWVSALNGCAYCVEHHFAGLTRLLGDRARSDAIRAAIEAGAPEQAPL
EARERAAMAYVRKLTETPADMVEADVTALRAAGWEDGEILEINQVCAYFAYANRTVLGLGCSTAGDVLGL
SPGNSEDPDDWGHR
>gi|56696145|ref|YP_166501.1| polyphosphate kinase 2 [Ruegeria pomeroyi DSS-3]
METAKPIAPQKDSKANGVDATDPVVKVASPQDPAGDAKVEDATAPVAEVEPRTPRNRRLPTPENVRHAFE
SGKYPYSRKMSRRPYEAEKAMLQAELLKVQLWAQETGERFVLLFEGRDAAGKGGTIKRFMEHLNPRQARV
VALNKPTWEEKGQWYYQRYVQELPTVGEMVFYDRSWYNRAGVERVMGFCTPNEYLEFMRQTPDLERMLVR
SGIRLYKYWFSVTQEEQQRRFKSRETDPLKQWKLSPIDKASLDKWDDYTEAKEAMFFYTDTADAPWTIIK
SNDKKRARLNCMRHFLSTIDYPGKDKHVVGEPDPLIVGRAHHVIQKSEHILGTALHPDQRARQD
>gi|56696146|ref|YP_166502.1| glutathione S-transferase family protein [Ruegeria pomeroyi DSS-3]
MITVHHLAQSRSLRILWLLEELGLPYEVIRYERDPKTRLAPPELRAIHPLGKSPVIETDGIRLAESGAIV
DYLCTRHAPQMMPPQDSAAWAEHLELMHFAEGSVMTPILLNLYVGLLGEAGAPLHPRIQSELTSHFRFME
DSLRPSGHFVLDGLSAADILLSFPAGVVARLGRAGEFPGLAEFAATMAARPAFQRALAAGGGD
>gi|56696147|ref|YP_166503.1| alpha/beta fold family hydrolase [Ruegeria pomeroyi DSS-3]
MSMQTETIDLNGNPFFLRRWGDPALPPLLMLHGFPEYGGAWADLAPHLAHRFHCIAPDQRGYGQSWAPEG
VAHYATSHLVADMAALVGTLGTPLTVLGHDWGAAVAYGLAMFRPELVDRLIIANGVHPVPFQRAMAAGGA
QSAASQYMNALRAPEATEHFAANDYKALTDFFTRHMGGHDWLSPARLAEYKAEWARPGRLDAMLNWYRAS
PLVIAAPGQPRTDLPDLPLDRLRVRCPHLLLWGPDDRALLPEATEGLEDFAPDLTRITIPGTDHWLCHQA
PDRVAAAILDWMPQPETAR
>gi|56696148|ref|YP_166504.1| hypothetical protein SPO1259 [Ruegeria pomeroyi DSS-3]
MPDPFDRLIPEARAFLAELAANNSRDWFTAQKARYDTELKRPAELLLDQVAARLGPGTATKLFRAQRDVR
FSKDKTPYNTHLHLLWTTPEGAQWFFGVSPDYVTAGGGRMGFDAATLARYRASLPQQGEGLRAALAALAD
QGLRLSEPELKRPAPPVAPGDALADLARRKSLTAWIDLPPDGEDLPGRILTAFERLRPMQSALSQLLEKG
A
>gi|56696149|ref|YP_166505.1| MATE efflux family protein [Ruegeria pomeroyi DSS-3]
MTYRGHARAIAVLGLPLIGGHLAQFAIGLTDTVMLGWYGVEALAAVTLGSSYFFVLFLMGAGFGWAVMPM
VAAAAAERDETSIRRATRMGLWASLIFAMLAMPLLIWSQPILLALGQEPEIATMAAEYLRVAGWGMIPAL
TVMVVKSYLAALERTQVVFWVTVGAVFANAAANYALIFGNWGAPELGITGAAIASICTQMVSLVAVLAYA
LWVLPQHTLFRRFWRPDSEMFRRVVRLGVPIALTNLAEVSLFSASAVMMGWLGAVPLAAHGIAIQLAAAT
FMVHLGLSNAATIRAGNAYGRRDREHMARGGKVVIAMSLMMSLVTIALFLTCAEPLISLFMEPDDPNRPE
ILAIGVGLLAMAALFQLVDGAQVMALGLLRGVQDTTVPMIMAAVSYWLVGIPASYVLGFVLRWEGIGVWA
GLSVGLACAGSLLMTRFWRRSIRLID
>gi|56696150|ref|YP_166506.1| MarR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MWTGKTGNMLGALALTLTDRIRAEVNVSLDAGGETAAALVLLGANPALTVAEIAEALGLTHSGAVRLVDR
LCVSGLAERQSGPDARAVHVRLTSAGARQRRRALLRRQAVLDHALQALSPSEEAAFAQMLDKLLRRMLDF
PDQGHRFCRLCDEDLCVPHGCPVEERLVELLERQARETGL
>gi|56696151|ref|YP_166507.1| hypothetical protein SPO1262 [Ruegeria pomeroyi DSS-3]
MTTSGERRVAGLAMIGSAACWGSATVMSRDLLVSMTSIQLLLVQLMASVCVLLALAAPRFPWTYRSREMT
KGALCGVLEPGLAYVVGLAGLAQTTAGRASIISASEPVLIVLVAWVLFNQRPGLRLMAAIAIAVGGLVLV
SWSPVVEDRGGAFRGDMMVVLATLFAAGYVVISSRIVGSFPAASLASGQQMVGLAFAMLVYAGAMAHGDD
MGGFGAIPGGTLAYAALSGVVQYALAFWLYLIGLRYLSAGAAGLWLTLIPVFGLAGAWLWLGERPGLLTV
LGAIVIVSAVVLGNRGGTE
>gi|56696152|ref|YP_166508.1| hypothetical protein SPO1263 [Ruegeria pomeroyi DSS-3]
MGAELPDYYFRIRDNGAFVFRVDTENRQRRIEMDHIAVVNIKNGDIKPQGGRTLSPEDLREIKRWMAERT
DLLARRDIDDIHRAVDYLNLTTHWVQSKASDAQLEEVTDALLLAMHDLRSVLVRKKADRLMKG
>gi|56696153|ref|YP_166509.1| aspartate aminotransferase [Ruegeria pomeroyi DSS-3]
MSFLSATLSRVKPSPTVAMTAKAAELKAGGRDIIGLSAGEPDFDTPQNIKDAATAAIAAGKTKYTAPDGI
IELKQAVCAKMQRDHGLSYTPAQVSVGSGGKQTLYNALMATLNPGDEVIIPAPYWVSYPDMVLLGGGTPV
VVETALESAFKLTPAQLEAAITPRTKWFIFNSPSNPTGAGYSRDELKGLTDVLMRHPHVWVMSDDMYEHL
AYDGFAFCTPAQVEPGLYERTLTCNGTSKAYAMTGWRIGYAAGPVGLIAAMRKIQSQSTSNPCTISQWAA
VEALNGTQEFLAPNNALFKRRRDLVLSMLNAIEGIDCPTPEGAFYVYPSIAGLIGKTTPKGTRIDSDETF
CTALLEEADVAVVFGAAFGLSPNFRVSYAASDAALTEACTRIQRFCASLT
>gi|56696154|ref|YP_166510.1| DNA-binding protein, putative [Ruegeria pomeroyi DSS-3]
MSDETDWYGPEAATFGDRLAAAREASGMTQAQLARRLGVKKATINGWEDDLSEPRANRLSMLAGLLNVSI
VWLITGEGQGGEALNETDETARDMAALLTELRSLRADLQASGQRAARLEKQLRQIMEHSA
>gi|56696155|ref|YP_166511.1| TPR repeat-containing protein [Ruegeria pomeroyi DSS-3]
MSESRETRIKRMRMRSMRRGIKEMDLILSAYADRSIEAMDAGALDLYDALLHENDQDLYQWVTGQVSAPD
RYRDLIADISQTFQK
>gi|56696156|ref|YP_166512.1| MarR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MANYLEALSLVERLHRLLLDVIKDEFERVGVLEINAVQALLLFNIGDNEVTAGELKSRGYYQGSNVSYNL
KKLVDMGYMHHQRCEIDRRSVRVRLTQRGREIRDVVAELFMRHAEGLQSRGVLGPDGIEEITSALKRVER
YWTDQIRYIY
>gi|56696157|ref|YP_166513.1| putative lipoprotein [Ruegeria pomeroyi DSS-3]
MIRLLTLLALLLPVPGWAGCRQALALGLDVSGSVDGREYRLQLDGLAAALLAPEVQARLLAMPGHPIRLA
VYEWSEPGFQRLILPWHQIDTAADLETVAATLRTTRRAAAPPGTAIGPAMHHGAALLAQQPDCWKRTLDL
SGDGKHNMGPHPRVVKAALEGSGLTVNALVIGADSTTFTDLRQTQIGELSAYYGAWVILGPDAFVEVALG
YEDYQAAMERKLRRELEGLVLSALPTRAATQLHAPVLPWPVLPQ
>gi|56696158|ref|YP_166514.1| hypothetical protein SPO1269 [Ruegeria pomeroyi DSS-3]
MMYRAAAVACALEVTAPPVQAAECRLALALALDVSRSVNAREDRLQRQGLAAALRAPEVVRAAFSTPQPV
ALAAYEWSGPNDQHLLLDWVLLRTPTDLETAAARLGASRRATTEAPTAMGHALTYGAALLGRGPDCLFRT
IDLSGDGENNEGFGPRAAYSTPEFDGITVNGLAINGAEYETEIQLIPYFRSEVLHGPGAFLEVAQGFADF
ERAMRRKLERELSGLVIGELR
>gi|56696159|ref|YP_166515.1| lactoylglutathione lyase, putative [Ruegeria pomeroyi DSS-3]
MPLKYLHVMVRVKDLEKSMAFYELLGLREIRRYDSEEGRFTLVYLAAPGQDETPLELTYNWDGDDGLPSD
SRHFGHLAYGVDDIYATCAMLQENGITINRPPRDGRMAFIRSPDNISIELLQNGAALDPAEPWVSMDSTG
HW
>gi|56696160|ref|YP_166516.1| hypothetical protein SPO1271 [Ruegeria pomeroyi DSS-3]
MVRPWGKIRRPIAALALLTGLLSSMAGAEAPVKLSPDELRATAVQALRIGAPEQAYSYAQALLQRDPADR
QALLVHSRAARTLGRFDEARSSAQQAWRLSETDEQKFASSMVMAQALASDERRTLAQWWLRRAVEHAPSE
ELSRIAVRDFRYVRARNPWLTRLSFAITPDSNINNGSSQRSSFLNYKLSEVLYGQPVEYQLGGSARALSG
IEYALGVTTRYRFRELPTRAHDLILSVDLRAYSLSSEAKAIAPTASASDFSFASYTLGYGQRGINLDRRG
EYRFFVDVGQSWYGGNEYARFARFSLGQSYKLARGRQINARIATERQWGVTRSDQDTVRADLSYTLPLSG
GTVLWTNLTGAVATSDVAADEFDEIALRAQITFAKPVFGATAQLGLWARSRDYDVSPHDRNGRQEDKYEA
DFTLIFNKIDYYGFNPTMRISASRTESNIALYDARRFGVNFGIQSAF
>gi|56696161|ref|YP_166517.1| hypothetical protein SPO1272 [Ruegeria pomeroyi DSS-3]
MRLTFARPHQTIGQNYLTKEQRQAVMKPHLVAVAACVVLTACGGSDAVFGTGDGSGDGSGGGTGGDTGSP
IQGDRTLPPGTTSPTARTGIFRSEPTSTETAYNGNGYARDVSYNAADDTFSVDNLGFDGDNTYSRGTAVG
SLGPYSVYEADAQFLDSFDGEPVNQFRHRAIYGVSTSGNTQFAIVRTGAYVGYGFGGFIYQRNNEVNLPT
TGQALFTGSVAGLRDYNGIGALEYTTGDIRIAIDFDDFNDTTGTRGDAVRGEIRNRRIFDLQGNDVTETT
LNRINTQNNATLREIPTATFTVGPGVMDDNGEILGQMTSYFVNNEGQALLFEEGNYYAIISGDQAQEIVG
VVVLETSRDPAAPTVRETGGFIVYN
>gi|56696162|ref|YP_166518.1| FAD-dependent thymidylate synthase [Ruegeria pomeroyi DSS-3]
MAVLMRLLAIYSIVATHLAKGTLMPLSSEQLAEIDAQRAHTAPTRRVVSPGMESHLYRAHPVLDHGFVRV
IDYMGDDAAICQAARVSYGTGTKSVQNDEGLIRYLMRHWHSTPFEMCELKLHVKLPVFVARQWIRHRTAN
VNEYSARYSILDREFYIPAPEHVAAQSAVNNQGRGEALQGEEAARVLEILKADSARCYDNYEAMIGQEGQ
QGLARELARMNLPANIYTQWYWKVDLHNLFHFLRLRADAHAQYEIRVYAETMCRLVADWVPFAYKAFEDY
RLGAVNLSAQMVDSLRRMLAGEAVTQETSGLSAREWREFQDVIGR
>gi|56696163|ref|YP_166519.1| hypothetical protein SPO1274 [Ruegeria pomeroyi DSS-3]
MRRSFLGLCLAVPLAACVQHAGTSGGDTARLIFFGGANTERMNIVLPDFPTERCALHRPRPVSADGDREA
ALLRTALLSIVTNVLTNAVVEGARKWAQRYQARYAGSANFSNFRIGRTTDDIRCVGIIRMGPESADKTRR
DLYSAIVLELKEIGDGAMFIRPVYSYTPVLKTATSVQANEIGWAGTAITVSVAAVNAEGELVSHSQSLGL
KPAKANVSSHLENVRHTAVPKIYSDGPEAGYDTAIMPYFQGRPVTLSIAVTEVGAGANDAKALAGAVEAN
KGAISTLISGSLQRASD
>gi|56696164|ref|YP_166520.1| cold shock family protein [Ruegeria pomeroyi DSS-3]
MPTGTVKWFNATKGYGFIAPDDGGKDVFVHISAVERSGLTGLADNQKVSFEMLDGRDGRKMAGDIKPL
>gi|56696165|ref|YP_166521.1| ArsC family protein [Ruegeria pomeroyi DSS-3]
MLIYGLKNCDTCRKALKSLPDARLVDVRADGVDPAVLSRAWAQFGADLLNTRSTTWRGLDAAERAGAPLE
LIAQYPALMKRPLIEAGGEFYLGWTPATRQALGLG
>gi|56696166|ref|YP_166522.1| hypothetical protein SPO1277 [Ruegeria pomeroyi DSS-3]
MRNAALVLGIIAGLIGMLVGFFSFGYVEAIEHFGEIDGLAEQLENADLVQMTSIIAPMLAIAGGAMARAR
ALWGGVLLLVSAAGMYHAFGFNVFTMFPIAFAAVGGVLGVAAGKPDEPKAHF
>gi|56696167|ref|YP_166523.1| hypothetical protein SPO1278 [Ruegeria pomeroyi DSS-3]
MNPLVSIHNRVFGLVETAGDWLLPLFARFTFAAVLLVYYWNSGLTKLGDGIFGLFSPSIGAYSQIFPKQL
EAVGYDVSQLGMFHWAVVMAGTYAEFILPLLIVIGLFTRLAALGMIGFVVVQSLTDVYGHGATDLATLGA
WFDNQASGVIMDQRLFWVFTLSLLVIKGAGALSLDALLRGRTQAAMA
>gi|56696168|ref|YP_166524.1| hypothetical protein SPO1279 [Ruegeria pomeroyi DSS-3]
MSVSQTQFHTALLDPASAVPQGLCDAGERPAGRRFDVYRNNVAVSLTEAMHQAFPVITKLLGTQNMDGLA
GIFLRRHPPASPLMMFYGAAFPEFLAGMQQLSHLGYLPDVARLELALRHAYHAADSTAIDPQALAIDPEA
LMAARLEFAPAMRLLRSPWPIHAIWRFNTEDDAPKPEPGGQDVLITRPEYDPIPQLLPPGGADWITALQG
GATIGAAYEAAAEQTPEFDLGATLALLLQGGAIISLTEQGQDNEPTRLDP
>gi|56696169|ref|YP_166525.1| hypothetical protein SPO1280 [Ruegeria pomeroyi DSS-3]
MSQRIGQMLDSSRTDTHLPAMPGVGYKPQHFAEILEAPGPVGWLEIHAENYMGDGGRPLAQLRHLSERFP
ISVHGVGLSIGGEGALDADHLARLKHLVGWLNPASFSEHLAWSTHDSHFLNDLLPLPYTDATLARICDHI
DQVQEVVGRRMLLENPSSYLAFAESSWSEPDFLREIAKRTGCGLLLDVNNVFVSATNLDFSPQGYIDAYP
LAHVGEIHLGGHDEDTDDHGRPLLIDSHGREVVDPVWALLDHVLERSGPKPILIEWDTDVPDWPVLRAEA
ARAQQALERIPA
>gi|56696170|ref|YP_166526.1| hypothetical protein SPO1281 [Ruegeria pomeroyi DSS-3]
MTDMSNTAKTLAIAGAVAAALAGTATTASAQAKEKCYGVSLAGKNDCAAGPGTTCAGTSTVDYQGNAWTL
VDAGTCESMELPAQADGSVRKGSLEALERDLPA
>gi|56696171|ref|YP_166527.1| threonyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
MAQISLTFPDGNARSYDAGVTPAQVAADISTSLAKKAISATVDGKHWDLQWPIATDAQIAIHTMADEAQA
NELVRHDLAHIMARAVQEIWPATKVTIGPVIENGWYYDFDRAEPFTPEDLGLIEKKMKEIINKREPVTTE
VWERTRAIEFYKANNEPYKVELIEAIPGTEPIRMYWHGHWQDLCRGPHLQHTGQVPGDAFKLMSIAGAYW
RGDSNRPMLQRIYGVAFTGKEKLKAHLHMLEEAAKRDHRKLGREMDLFHMQEEAPGQIFWHPNGWTIYTT
LQDYMRRQQRRGGYVEVNTPQVVDRKLWEASGHWEKYQENMFIVEVDEEHAREKAVNALKPMNCPCHVQI
FNQGLKSYRDLPLRMAEFGSCNRYEPSGALHGIMRVRGFTQDDGHIFCAEDQIESETAEFIDFLSMIYKD
LGFEKFSVKFSDRPDTRAGSDAVWDKAEAALLSATRAAGIEPELNPGEGAFYGPKLEFVLTDAIGRDWQC
GTHQVDFVLPERLDATYIGADGAKHRPVMLHRATLGSFERFIGILIEEHAGKLPFWLAPRQVVVASITSE
ADDYVREVVAELCAAGVRAEADTRNEKINYKVREHSVGKVPVILAVGHREVEERTVSVRRLGEKQTSVQS
LADVTIELGRAATPPDLL
>gi|56696172|ref|YP_166528.1| hypothetical protein SPO1283 [Ruegeria pomeroyi DSS-3]
MMESFPTELGILTCLMILAASLWIPYVVGIATDPSQEEAFARPAQISNLRPWVQRAHRAHLNLLEQSMPF
AVLVLILALMNGFSTLTYWTAIAFFWVRVLHAAGMISGYARMPLRPILFSAGWVCTLLMAYAIFAAR
>gi|56696173|ref|YP_166529.1| ArsR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MDTLFKALNDPARRAILDQLRQKDGQSLSELESKFDMTRFGVMKHLKLLEEAHLVLTRREGRFKYHYLNP
LPLQDMINRWVAPFLQPQAQGLAALKEKLETENRMGKPDFMMQTFIRCTQDALWAALTETEQMAAYHFLC
NEVQGKVSPGETVEFITPAGGAMLRQVTRRLDPKSRIEMSFEPLFMGPGAATSEMVYLIEPQGEICKLTI
EHYKLAAGQDGIGEGWARLAASLKSYLETGTALKGAA
>gi|56696174|ref|YP_166530.1| hypothetical protein SPO1285 [Ruegeria pomeroyi DSS-3]
MSDTLTTDRGRSIAYHLSPGDGPCIVFLGGLKSDMEGTKAVHLEAWARGRGHGFLRFDYSGHGESSGIFD
EGAIGDWHQDTLAVIDSLTEGPLIVVGSSMGGWQALLLARARADRIAGMVTIAAAPDFTEDGWWAGFDAG
QKAQLAAEGRVELPSDYMEPYIVTRRMIEDGRDHLVLRAPLHLPFPVRFLQGTADTAVSVDTAVRLMQHA
TGPDMRLLLVKDADHRFSDETCLKIIEDAVIDVRGPA
>gi|56696175|ref|YP_166531.1| hypothetical protein SPO1286 [Ruegeria pomeroyi DSS-3]
MRRLGRLLGRALALLVLVAGLAWWLGPYEQVDLKARFDPRKFGEGVQVYFESIESRFADITPGVEKRVIW
APGGYERRTPYALVYLHGFSATSEEIRPVPDHIAQALGANLVFTRLQGHGRGDDAMAQGSASGWMRDTAE
ALAAGRAVGERVIVIATSTGATLAAAAALDPEMSADVAAMILVSPNFGVNDPLAFVPTLPGARYWLPRLM
GDARDVTGPDADKNTYWTTRYSWSALVPMSVLVQAVVSLDFAQARVPALFWFSDQDRVVRADLTRALAGR
WGGPVRVEAVTMGPGDDPSSHVIAGDIMSPGQTDIAVAGMLAWLREQGIY
>gi|56696176|ref|YP_166532.1| glyoxalase family protein [Ruegeria pomeroyi DSS-3]
MDQRVSLITIGAEDIEAAASFYEALGWRRVETPDGVIAFDLIGQVLGLYPLAALAEDIGLPVGELGQGAM
TLSHNCPDRETVDALLKRAQTAGAEILKPASEVFWGGYHGYFRAPDGSIWEIAHNPFSALGPNGEFRWNG
YG
>gi|56696177|ref|YP_166533.1| hypothetical protein SPO1288 [Ruegeria pomeroyi DSS-3]
MRRPGSMWSLETLGRVRLSRHFFMRDFLYSEIGSFHEKQNIPDDPDLAIETGRAFCETLMDPLEETFGRI
AVRSGYRSPALNRFGNENRLNCARNDHPLECHIWDRGRGEARIAGASVVIPWFADRYAQGRDWRDLAWWL
HDHLEYSEVWFFPKLCAFNLVWRPKPLRRIDSYIAPRGRLVVTGEEPPLPLAERRAAYADFPAFRGIAYP
>gi|56696178|ref|YP_166534.1| alpha/beta fold family hydrolase [Ruegeria pomeroyi DSS-3]
MGEPLVFLPGMCCDARLFAPQLAALSRSHAVTVCPVGQADQISLIVEDLLPILPARFALAGLSMGGIVAM
EMIRRAPDRISRLCLMSTDAQTDTPQIAAAREPLIISARVGKLEQALGQVLRPESLAPGPGRLQVLEVMR
QMGLEAGPDQFVRQMRALQRRSDQQGTLRRIKVPTLILCGAHDRLTPVKRHAFMADLVAHARLSVIEEAG
HLPTLESPEVVTEALQAWLAEPQR
>gi|56696179|ref|YP_166535.1| hypothetical protein SPO1290 [Ruegeria pomeroyi DSS-3]
MGRARATELEFACDCGALAGHLSADAVRAGTRVGCHCPDCRAAELYFGQPDPAPGPVDIFQTSPDGFVID
RGAEHLALMRLSPKGLFRWYAKCCNTPLATTLDSPKKPFVGVNVRRLADPDALGRTRAYGFVPQPDGSRK
HRNIAPAVYGLLTRMLAGRLSGRWRKTPFFDTSTGEPVVKPQVLDKERRAALYR
>gi|56696180|ref|YP_166536.1| polyhydroxyalkanoate depolymerase, intracellular [Ruegeria pomeroyi DSS-3]
MRYMMTYDWMETVRNTNQWMGATANSMASYPLFSMVPNPVFNWMSAWGEVTERTFQRMVVKPDWGIRTFT
CEDGKDHLVEINTVVERDFGDLIHINVTGRETQPRKVLLVAPMSGHYATLLRSTVKSLLVNCEVYVTDWH
NARDIPVSAGKFDVEDYTLYLVDFMRELGPDTHVIAVCQPAPLTLAATAYLAELDPKAQPSTLTLIGGPV
DPDATPTEVTDFGRRVTMGQLEQSMIQRVGFKYKGVGRMVYPGLLQLASFMSMNADRHSKAFTDQIQRVM
RDEASDHDAHNRFYDEYLAVMDMTAEFYLSTVERVFKKREIARNAFIVDGHKVDISKITDVAVMTVEGAN
DDISAPGQCIAALDLCTGLADSKKANHLEPGAGHYGIFAGRSWRDNIRPLVIDFMNTNSRKGKSLRPANK
NSAA
>gi|56696181|ref|YP_166537.1| poly(3-hydroxyalkanoate) polymerase [Ruegeria pomeroyi DSS-3]
MTTSEDMPTHLTGEQFEQLKENMTKVEELSKRLVEIMAGKKPHTPALDAPNQELFAKAATAYWAEAWQNP
AKLLEQQLEFWGKSVLNFAEAQQALISGGAEGDEDAPKDRRFSNPMWDNNPYFRFIKQQYQTNAAALAQA
VASVDDLPDKDRKRLKYFSQQIIDMMAPTNFLATNPDALERAVETEGRSLLKGLENLITDLEANNGELVV
KLADEKAFHVGGNIATTPGDVVYRNRMMELIQYKPATDTVHEIPIVLFPPWINKFYILDLKAQNSFIKWV
TEQGFTIFVVSWINPDASYADVGMEDYIQDGFLTAIDEVKKICKVKQVNAVGYCIAGTTLSLTLSLMKQT
GDKSVKSATFFTALTDFSDQGEFTPFLQDDFIDGIEEEVTREGVLRSWIMARTFSYLRSNDLIYKPAIQS
YMLGETPPAFDLLYWNGDGANLPAKMAVQYLRGLCQRNEFAGEGFDLMGHTLHVRDVDVPVMAITCETDH
IAAWKDCYRGVQKMGSRSKTFVVSESGHIAGIVNPPSKKKYGHYTNPDLKDDAATWLAEADFNEGSWWPM
WAAWLKPRAGKQIPARDPGDSQHPSLCPAPGTYVVAKAST
>gi|56696182|ref|YP_166538.1| phasin, PhaP [Ruegeria pomeroyi DSS-3]
MAKTQDFTAIMKDMMGAFPVDTKAMEDAFKSTAALNEKLSGVALEAAEKSAEISSKWTKETLAKLSDMSK
AKAEPADYAKAMTDFASASAEVAAENMAAFAEVAKKVQMDTVELLMAAGKDITEDATAAVKKATNDVTAA
AKKAAAAK
>gi|56696183|ref|YP_166539.1| polyhydroxyalkanoate synthesis repressor PhaR [Ruegeria pomeroyi DSS-3]
MAEQEKPLLIKRYASRRLYNTETSDYVTLEDIAGFIRAGREVQIVDLKTGDDLTRQYLLQIIAEHESRGE
NVLPVNVLNDLVRSYMVPGGGMMPQFLQSSFDMLRESQSKLMENMNAMNPMAQMPGFEALKAQQEAFIRA
MTGGLGSTWSGPGKEGEGDKGEQGEDLDDIKKQLAELQRKLSKLS
>gi|56696184|ref|YP_166540.1| aminotransferase [Ruegeria pomeroyi DSS-3]
MSIQDLLGSVTQLFYNSQRLNSGIPNMTLPPNVHDAEPIPATAREAIDALMQSGDLFRYTAPQDAPVALL
EAEFANLLGSKYALAVSSCSAALFLSLKALGLPRDARVLIPGFTFAAVPSSVVHADCVPVLCEVGANYRI
DMADFEAKLSDVQAVIISHMRGHTSDMDAIMALCDARGIPVVEDAAHSLGTTWHGRNIGTIGRVGCFSFQ
SYKMINAGEGGILVTDDADLVARAVIMSGAYEHNWKKHKGPEGQNSPELAEAFARWQNKLPLYNLRMSNL
SAAVIRPQIPELARRVRDGLVNHDYVADRLNTSPFIDVPAPLAPEQRAPDSIQFNLVGLDEAEIRAFAAA
ADRRGVKVQVFGLSEDNARAFWNWQFLGEVPELPQTRAMLMRACDVRLPVRLSRAELDVVADILLAAMTE
VTGPARAYGT
>gi|56696185|ref|YP_166541.1| oxidoreductase, aldo/keto reductase family protein [Ruegeria pomeroyi DSS-3]
MKFLDTDILPLGMGCWPIGGAMFAGDQPLGYTNVDDDESIRTIHAALDAGITLFDTAPAYGAGHAERILS
RALKGRPEAIIATKFGTGIIEESKQLTENEDDPASVLPAIDRSLARLGRDRIDVLILHLNSLSVPKAEAL
FEEVEKACAAGKVRSYGWSTDFSESAVAFADRPAFVAVEHAMNVLLDAPRMRRALHDKDLVALIRSPLAM
GLLGGNYGAGDAMRKDDIRATSNPRTDYFANGQVNPTFLAKLDAIRALLTTDGRTLAQGALGWIWAQEGA
NIPIPGARTAKQIEGLAGALAFGALPDDVVVQVEALVEREPDDTPDRAR
>gi|56698712|ref|YP_166542.1| LysR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MNETNFDWDDLRLFLAVAREGGLAAAAASTGKSAPTLGRRMLNLERRLGSDLFQRMARGYALTEDGQHLL
AKAARLESLVLPITAIDPEQAIPVVKVSAGSWVTHLLCANVSEIIGSDRIRLRFIASDDVADIGRREALI
GIRNHRPEGSGLAGRRITRVRFAVYARNRKVNTWARVIATTPSAKWVREEARTADAIEVTSPRNALDLAL
AGTARVVLPTFIGSQFDTLKQVSPLIGDLEHEQWLVTHHEDRFVPQVRKVIDRIYLILKQAKTSS
>gi|56696186|ref|YP_166543.1| glutamine synthetase family protein [Ruegeria pomeroyi DSS-3]
MADWTDNLPEAAQAYLENRRLDEVECIISDLPGIARGKAVPASKFARQDYFHLPDSIFYQTITGDWGDAA
GEEGFIERDMILRPDYSTATAAPWTGDWTLQVIHDAYDRDGDPIPFSPRNVLRRVVSLYHAQGWKPVVAP
EMEFFLVARNLDPAKEIEPMMGRSGRPAAARQAYSMTAVDEFGPVIDDIYDFAEAQGFEIDGITQEGGAG
QLEINLRHGSPVRLADEVFYFKRLIREAALRHNCFATFMAKPIENEPGSAMHIHHSIVDMETGENIFSGP
QGGETDAFYHFIAGLQNHLPSGLAVMAPYVNSYRRYVKDHAAPINLEWGRDNRTTGIRVPLSGPAARRIE
NRLAGMDCNPYLGIAVSLACGYLGLMEELRPRKQFKGDAYVGEGDIPQVMGDALDLFDEAKALHEVLGPE
FARVYSIVKRAEYNEFLQVISPWEREHLLMNV
>gi|56696187|ref|YP_166544.1| glutamine amidotransferase, class I [Ruegeria pomeroyi DSS-3]
MKIGILLTGHAPDTLVDATGDYDAFFVRLLGPQNFEFETYSVVDGQFPSGADAADGWLITGSRHGVYEDH
PWIPPLEALIRQIRDQGQPLIGVCFGHQIIAQALGGKVEKFQGGWAIGPTEYDMGSERVTVNAWHQDQVV
ALPEGAEVLASNDFCRNAMVAYGDTIWTIQAHPEYDNDFIGGLIRTRGRGVVPDTVLDDATARLDSPLDS
PAIGKRMADFYKKARA
>gi|56696188|ref|YP_166545.1| glutamine synthetase family protein [Ruegeria pomeroyi DSS-3]
MQAKNWLRKNPQVRTIRVAAADLNGQPRGKRVPGRFADKAIEGGTRFPLSVMNLDIWGEDIEDSPLVLAS
GDRDGVLQPTERGFMPMPWLDTPTGLLPIWMFHEDGRPYEGDPRHALNTVVKRYKARGLKPVVAVELEFF
LIDDSGRHLQVPQSPRSGKRRKAGEILSLRALDQFDHFFTELYDACEVMDIPADTAISEAGVGQFEINLM
HQDDALRAADDAWLFKMLVKGLARKHGFAASFMAKPYEDYAGSGMHMHFSVLDEDGNNVFDDGTERGSDT
MLHAVRGCLDAMSGSTLIFAPHDNSYARLVPNAHAPTGVAWAYENRTAAIRIPSGSPVARRIEHRVAGGD
VNPYLMIAAVLGAALNGIEDGQMPPQPISGNAYKANLAQIPDRWDTAIDAFESDPAVARIFAPELIRNFV
MTKRQEFRYFQELTEKEKTEVYLDTV
>gi|56696189|ref|YP_166546.1| fructosyl-amino acid oxidase, putative [Ruegeria pomeroyi DSS-3]
MHVVVIGAGIVGASIADQLAARGARVTVIDRAGPGAGASGMSFGWINAAASEDDTYFRFRLAAVARFRAL
CDRLDLSDAVTWNGCIWWEDAGEAFETHLEAMARWGYDVTLIGADDFARLEPNVANPPERAIWCPSEGAA
EPDKVARALLRRAATNGARLILGREVTGLMRRGERVTGIDTDLCPMAADLVVVAAGIRSGALTGLPMQNK
PGLILRTAPIAPVISRIIMSSDIHFRQASDGRLYLGEIFSGGIATETLDFASGLIDELMTRLRNRLPGVE
GLQLEQAALGTRPVPADGLPAIGPVPGSEGLYLATMHSGVTLGPLVGELVAREVLEQDSDPLLAPYRPSR
LF
>gi|56696190|ref|YP_166547.1| His/Glu/Gln/Arg/opine family ABC transporter permease [Ruegeria pomeroyi DSS-3]
MKSCIDTIQDYGLRSIGIGERLLPRSDFTLCEQFTLIGSGMIWNIYFGLLALVSGYFLAVTLALGKSAAN
PWARKPAEWFIFLFRGSPLFIQFFFAYFFFLSLKKSYPMFDLLTSAWAGALIVLFMNTAAYSAEIFYGAL
RAIPKGDVEAADAYGMSGWPRFRRIIWPTMMRLAWPAYTNEAIFLFHATTLVFFSAFPAWQQRGDALYYA
SYFADKTFNPFVPYPILAFYFILLTLAVVGIFGVINTRLNRHLPAERRPKMRFRLNLAR
>gi|56696191|ref|YP_166548.1| ABC transporter permease [Ruegeria pomeroyi DSS-3]
MFSYCTDPDTLDTVRWFSCFLTNGVHLSFYMSFIKVLVLLLVTAPVALAVGFAGAMATRATLPPLRWLGE
GYIAIMRGVPDIAFFLFFVIALDQAFEWTRHQVLCPDWTDPIRQGNDFLVCPDAKMPLGRAAEWVHQTYS
FFLAVITFAIVFGAFAANVLRGGMRAVPHAQLETAAAYGMSRRQTFWRILVPQMWIYALPGLSNLWLILI
KATPLLFLLGIEDIVYWAREIGGTKTSQFTDYPHGDWRMWYFLFLLVFYLSFTRISEILLERLTVRLSHG
QATTGGEALRKEATA
>gi|56696192|ref|YP_166549.1| His/Glu/Gln/Arg/opine family ABC transporter periplasmic substrate-binding protein [Ruegeria pomeroyi DSS-3]
MPRRNPSVCRAFFPSPRPHNRNTNDNGSLSMKKLILTTAALALSAGMAMADTVRMGTEGAYPPYNFINDA
GEVDGFERELGDELCKRAGLTCEWVKNDWDSIIPNLVSGNYDTIIAGMSITDERDEVIDFTQNYIPPTAS
SYVATSDGADLSGIVAAQTATIQAGYIAESGATLVEFATPEETIAAVRNGEADAVFADRDYLVPIVAESG
GELMFVGDDVPLGGGVGMGLRESDGELRGKFDAAITSMKEDGTLNTMIKKWFGEDAAVYE
>gi|56696193|ref|YP_166550.1| His/Glu/Gln/Arg/opine family ABC transporter ATP-binding protein [Ruegeria pomeroyi DSS-3]
MTEAAPVIQIKNLHKSFGQLEVLKGVDITAHRGDVVSLIGSSGSGKSTLLRCCNLLEDSQQGEILFNGEP
VRWTGTGSHRRPADAKQVLRIRTNLSMVFQQFNLWAHMTILQNVMEAPIQVLGRDRAEVEDSARRYLDKV
GIGDKCDNYPAQLSGGQQQRAAIARGLCMEPQALLFDEPTSALDPELEQEVIKVIRDLAAEGRTMILVTH
DMKMAADISSHVIFLHQGLVEEEGTAEDIFAAPKSERLQGFLSVTKAA
>gi|56696194|ref|YP_166551.1| hypothetical protein SPO1308 [Ruegeria pomeroyi DSS-3]
MSAMLGMYDMPPLRAANDRFWALIRSELGYGPETLDRTRDVWTIWRDPDLVLAQTCGMPYRARLHGHLQL
VGTPDYGLPDCPPGHYRSVFVARVDDTRALPELVGGTFAYNEALSQSGWAAPMTHLQADGLAPAALLESG
AHAASAAAVAEGRADLAALDALTWTLLCEHTDLGGRLREVAHTAPTPVLPYITAPGRDRAVIAAAVRTAI
ANLDPDDRAALHLEGLVDIPASAYLSVPNPPAPSAICPAD
>gi|56696195|ref|YP_166552.1| hypothetical protein SPO1309 [Ruegeria pomeroyi DSS-3]
MFRDFLTRLTQPQPAPLDDGDARLALTALLVRIARSDNDYAQAERDRIDRIAAARYGLGPFEAAQLRARA
EELEAEAPDTVRFTRAIKEAVAYEDRRAVVEALWSVVLADGERAQEEDALLRLVANLLGVNDRDSALARQ
RAAQR
>gi|56696196|ref|YP_166553.1| hypothetical protein SPO1310 [Ruegeria pomeroyi DSS-3]
MLKKFLQAFRPPTPAPLPDPDAELALGALLVRVAQADRDYQVEEISLIDRILARLYGHNAIEAAKVRATC
EKLHAAAPETDTFGKLIRETTGLEERLAALDALWEVVLADGEQREGELKILEEARIAMGLSRKDSDSARE
RILARAG
>gi|56696197|ref|YP_166554.1| renal dipeptidase family protein [Ruegeria pomeroyi DSS-3]
MIVFDGHNDVLTELVRAGGRAAAGGFLSGLPGQLDLPRARAGGFGGGFFALWARSEGATDFSTLGPEYDL
PLPEPVPEAQAWEMIRAQADTLVALEEAGAVRICTSTAQIARARDEGLLGAILHLEGAEGIGPDFYELEE
LYALGLRSLGPVWSRPNAFGHGVPFRYPSGPDIGPGLTERGRALIARCEELRILIDLSHLNLAGFREVAA
LSKRPLVATHSNAHARVPHARNLTDEQLRIMAESGGLAGVNFESTFLRPDGRPDDDIPAAWLLAQFDHLL
DRLGEEGVAIGSDYDGCTPPAWLNSVDKLPALIAAMERHGYPAARIERICWGNWMRVLAETWGESA
>gi|56696198|ref|YP_166555.1| CTP synthetase [Ruegeria pomeroyi DSS-3]
MARFIFITGGVVSSLGKGLASAALGALLQARGFSVRLRKLDPYLNVDPGTMSPFEHGEVFVTDDGAETDL
DLGHYERFTGVAARKTDSVSSGRIYSNVLEKERRGDYLGKTIQVIPHVTNEIKDFISIGEDEVDFMLCEI
GGTVGDIEGLPFFEAIRQFSQDKPRGQCIFMHLTLLPYIKASGELKTKPTQHSVKELRSIGLAPDILVCR
SEGPIPQKEREKLALFCNVRPDSVIAAQDLSTIYDAPLAYHREGLDQAVLDAFQISPAPKPDLTKWEDVS
DRVHNPEGEVKIAIVGKYVQLEDAYKSIAEALTHGGMANRVKVRIEWVDAEIFEKEDPAPHLEGFHAILV
PGGFGERGTEGKIKAAQYAREHQVPYLGICLGMQMAVIEAARNVAGIAGAGSEEFDHEAGKKRFEPVVYH
LKEWVQGNYKVSRKVDDDKGGTMRLGAYDAVLKEGSRVAEVYGGTAIEERHRHRYEVDIKYREQLEKAGL
CFSGMSPDGRLPEIVEWTDHPWFIGVQYHPELKSKPFDPHPLFADFVRAAKESSRLV
>gi|56696199|ref|YP_166556.1| preprotein translocase subunit SecG [Ruegeria pomeroyi DSS-3]
MENVVLIIHLLLALGLIAIVLMQRSEGGGLGMGGGGGGAMTGRAAATALSKVTWVLAVAFILTSITLTVI
AAQKAAGTSVIERLGVPAPATSEPATPSVPAGSDLLPPSAGDNAPLVPKAD
>gi|56696200|ref|YP_166557.1| nitrile hydratase subunit alpha [Ruegeria pomeroyi DSS-3]
MPHDHHDHPHSLLPSDPALRVKALETILTRKGLIDPAALDEIIDTYQNRIGPQNGARVVARAWADPAFKA
ALLADAMPLLTELGYYGRQGEHMVVVENTPETHNMVVCTLCSCYPWPLLGIPPGWYKSDAYRSRAVREPR
KVLAEFGVSLPEGTSVRVWDSTAEIRYLVLPMRPEGSEGLDEAALAALVTRDSMIGTGLARVPA
>gi|56696201|ref|YP_166558.1| nitrile hydratase beta subunit [Ruegeria pomeroyi DSS-3]
MTRVHDMGGRFGDGVITPEPDGIPQLADWQARALALTLAAGSLGQWNIDISRHARERLSPADYGRFSYFE
KWIAALADLLVEAGVLTEDDLRGRGDTGTHPLAERALKAEAVAAVLARGGPADRPSNVAARFEVGQMVRT
LRPAANRLVDGGHTRLPAYAAGARGRIVLKHGSHVLPDSSAHRLGEAPEPLYAVAFPASELWADPEAPGD
EVVLDLWQSYLEPA
>gi|56696202|ref|YP_166559.1| hypothetical protein SPO1316 [Ruegeria pomeroyi DSS-3]
MSECPDIAAPEPVFAEPWHAQVFALTVHLNEAGRFTWAEWVDRFSATLKRHGLSRDLDGGADYFDAWLET
LETLLSEEGTAGPEERARMRAAWEQAYLSTPHGQPVRLAD
>gi|56696203|ref|YP_166560.1| hypothetical protein SPO1317 [Ruegeria pomeroyi DSS-3]
MALSHKARRRWSLVVLLVALPLYIVVAVTLTDWLRARFDGLPMLVELVIFIGLGILWILPLKPVFRGVGQ
ADPDDKG
>gi|56696204|ref|YP_166561.1| adenylosuccinate synthetase [Ruegeria pomeroyi DSS-3]
MANVVVVGAQWGDEGKGKIVDWLSERADVIARFQGGHNAGHTLVIDGEVYKLHALPSGVVRGGKLSVIGN
GVVLDPWHLVKEIATIRDQGVEITPETLMIAENTPLILPFHGELDRARENQNSVAKIGTTGRGIGPAYED
KVGRRVIRVADLADAATLELRVDRALVHHNALRSGLGLDPIDRDALLVSLREIAPQILPFAAPVWKVLNE
KRKAGKRILFEGAQGALLDIDFGTYPFVTSSNVIAGQAATGVGIGPGAIDYVLGIVKAYTTRVGEGPFPT
ELDDADGERLGTRGHEFGTTTGRKRRCGWFDAALLRQTCATSGINGIALTKLDVLDGFETLKICVGYDLD
GTRLDYLPTAADQQARCTPIYEEMPGWSESTEGARSWADLPANAIKYVRRVEELIDCPVAMVSTSPERED
TILVTDPFAD
>gi|56696205|ref|YP_166562.1| hypothetical protein SPO1319 [Ruegeria pomeroyi DSS-3]
MGIFLRWMFAFGLLALTYNPTEINYVRWAYWNYQTHLSVAVFMGLLLTIGYIIYLRATLRSIGPFGMALV
LSVIASLLWVLFDFGLLHLDNTTVNVWLGIFALSVVLGIGLSWSHVRRHLAGQSDVDDVDE
>gi|56696206|ref|YP_166563.1| putative lipoprotein [Ruegeria pomeroyi DSS-3]
MVQNNKVLTVSYGTFSCTLEGFEDSFDTMKAIAEYFRDLAADDRYFGAEPPQPDAEMLARIAEREIARQV
EARRDDKGIVLRAAAAAPAALAAVEDAQPVAAEPAPAAPAAVEAPLEAPIAEPVAEAPITEPVAEAPAPE
PSDLTPEPAPEETPVIAEVEAEDAVEAEAEAEAETEAEAEVALEADAEEIAAAAEDEEEADALLASIASQ
FENLPEDEAVDEEDEVLAEIDLLPLAEPVEPAPEVAAEPDSIAAKLQRIRAVVSRNEQAHQAEAAYSEDE
HADDVAEEDAAPLDQIDSALAARFAGGMAEAEEALTEEIAVEALAEEALAEEVMEEAAKPEVEAEDEPQP
RVAVRVAKIKRTEIEAVEVEAVDEEDAAPMAGSLSPEDEDDLLRELAAVEAEYLAERAVGETAEDDEDED
DDIDLLSMDDDEDTSDVDGSLFAEADEDAEDDDQSGRAIAESALAGGDDDISRLLAAADEKLDDPDLSST
RETYSQMRAAVAATRAERSAGGTLGSHSSEDAYRTDLSEVVRPRRPVASGNTPRARGEDHPAPLKLVAEQ
RVDIKRGANSGPIRPRRVANLVAEAPAAAASADGSFADFVAETGASGLHELLEAAASYLSFVEGRDQFSR
PQLMNKVRQLDDQEFNREDGLRSFGQLLREGKLKKTANGQFTASGQIGFRPDSRAAG
>gi|56696207|ref|YP_166564.1| thiamine pyrophosphokinase [Ruegeria pomeroyi DSS-3]
MKTAIVEASEPVTLVGGGELGIGDLELALERARTLVAADSGALAALAQGRMPDAVIGDMDSLPALHRVRI
PEERLHRVPEQDSTDFDKALRHIAAPLVLGVGFLGARVDHQLATFNAMVRHADRPCALIGATEVIFHLPP
RLELDLVPDDVVSLFPLASVTARSEGLFWPLEGLHMAPDGQIGTSNRATGPVVIEAAGPGLLAMVPRGAL
DGVIRWFLSPRCGRWPARAG
>gi|56696208|ref|YP_166565.1| hypothetical protein SPO1322 [Ruegeria pomeroyi DSS-3]
MTADRPLLGIFLMLGFCVLAPMGDALAKLLGGTMPTMQLLLVRFAIQAVILIPLVQATGRPWQLRGRLLR
LTALRTLLHIVGIWAMFTALRYLPLADAIAIAFVMPFIMLLLGKYVLGEEVGPRRLGACIVGFAGTLLVI
QPSFAEVGLPALLPLLVAVVFALFMLVTRQLAKDTDPIALQAVSGVMACVALTPVLLIGHAAGVEALTLV
TASGTTLWLLLAIGVLGTAAHLLMTWSLRYAPSATLAPMQYLEIPVATAIGWLIFHDLPNGLAALGILIT
MAAGLYVILREQATARSAATETSG
>gi|56696209|ref|YP_166566.1| L-serine ammonia-lyase [Ruegeria pomeroyi DSS-3]
MFLSVFDMFKVGIGPSSSHTMGPMVAAARFLDMMRASPFEFHGVKGSLHGSLAFTGVGHATDRATILGLA
GFVPDSYDNDKAEAALAAIHATHTVTPEGLPVLAFDPKRDLVFDYDHTLPGHANGMILMATDAQGDVILR
QVFYSVGGGFVLTEEELAQGKDTNDGPPVPYPFKSAAEMLEMAAASGKSIAQMKRANEIARGCEISFAKG
TARLWEVMNNCIERGLATDGILPGGLNVRRRAKGIHDALVAERGMNLNAPHTINDWMSVYAMAVNEENAA
GGQVVTAPTNGAAGTLPAVLRYYLDHVPGAAPSHVEDFLLTAAAIGGLVKYNASISGAEAGCQAEVGSAA
AMAAAGLCAVMGGTPEQVENAAEIALEHHLGMTCDPVKGLVQVPCIERNGLAAIKAVSAASLALRGDGKH
FVPLDAVIETMRQTGADMHEKYKETSLGGLAVNVPNC
>gi|56696210|ref|YP_166567.1| glutathione S-transferase family protein [Ruegeria pomeroyi DSS-3]
MTAPYRLHYAPDNASLVIRLALEDMGLPYETVLVDRASRAQDGAAYRALNPAGLIPVLETPQGPVFETAA
ILLWLADTHGRLAPAPADPARGAILKWLFFASNTLHADMRMLFYPDKYIAEAQAETLRAGLRPRLRTHLA
LLDAVAVEAPDWLSPEAPSVLSWYLACLMRWLALYPLDADRSWFAAADTPHLHRILAALETRPATRAAQV
AEGLGGTPFTAPHHANPPEGSAT
>gi|56696211|ref|YP_166568.1| putative lipoprotein [Ruegeria pomeroyi DSS-3]
MKRKLHALSGSVALLTIACFWTSTALVELFGTHAQIAQVKIAILYGMALLIPAMATAGATGAALGKGWRL
PVVAAKSGRMKLIAANGLLILLPSAVFLAIRANAGQFDTLFYAVQALELLAGATNITLLTLNLRAGLALH
RRRIARAA
>gi|56696212|ref|YP_166569.1| MarR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MDQFQQNSAGYLANHMARLFAAGLARRIQPLGLAPAQFMVLLELWHDDGRTQADLTAALDVEQATMANTL
KRMERDGLIRREPSEEDRRARLIHLTDRARALEARAKAAAEMQNAQALAGLEEAERTAFTGLMRRVIANM
QRG
>gi|56696213|ref|YP_166570.1| ribose-5-phosphate isomerase A [Ruegeria pomeroyi DSS-3]
MTGELSPIDKAKFVAAKRAADLVEDGMRVGLGTGSTAAWLVRCLGDMVRKEGLKMRGVPTSTRTAQLARE
VGIEVITLDEARWLDITIDGADEFDGDLNLIKGGGGALLQEKIVATASDQMVVIADLGKEVSRLGAFPLP
VEVIPFGWQTTQALLEETLISMDVLGRTATLRMNGDTPFVTDEGNHILDLHLQRIGNARQLALVLNQIPG
VVENGLFIDICDTVVVGHGDGRVEIRDINQGTVEHDRLDFVESDNLFTDLAD
>gi|56696214|ref|YP_166571.1| glutathione-disulfide reductase [Ruegeria pomeroyi DSS-3]
MSFDYDLFVIGGGSGGVRAARVAAGETGAKVALAEEDRYGGTCVIRGCVPKKLMVFASEYSGMVEDAQAY
GWNIQPGAFDWDVFRSKLYTELDRLEGVYRNILKNNGVETFDMRARLVDAHTVELSDGTRKSAKHILIAT
GGRPVKPEIKGAELAITSNEIFHLDKLPERMLIVGGGYIACEFVGIMNGMGVEVTQYYRGAQILRGFDDE
ARGLVSEEMCQNGIKLHLGTNVLEMEREGDRIRVKATNGDEELFDQVMFATGRVPNADHLGLEGLGVELG
RKGQIVVDDYSQTAVPSIYAIGDVTDRVNLTPVAIREGMAFVDTVFRGKPTPVDHALIPTAIFTQPEMGT
VGLSEEEAAAQEPVEIYATSFKPMQTAFAGRSQRVLMKLIVSKATRKVLGCHIVAPGAGEMIQLVGIAVK
MGATKEDFDRTVAVHPVMAEELVTLRQPVRSA
>gi|56696215|ref|YP_166572.1| HflK protein [Ruegeria pomeroyi DSS-3]
MAGNSGGPWGGGGSSGGGGNRGNNGGQRPPEGDGPQIPEIDELVKKGQEQLRVLMGGRGGSGNRGGGNGR
GTGGGGGPAFTRGTVGLGLVVALGLWGMASFYTVKPEEQSVELFLGEFSGIGTEGLNFAPWPLVTAEVIP
VKVEQTETIGSGGRGSDAGLMLTGDENIVDIDFQVVWNITDPANFLFNLRDPRQTIQAVSESAMREIIAQ
SELAPILNRDRAVIAERLKDLIQLTLDSYNSGINIVRVNFDGADPPEPVKDAFREVQSAGQERDRLEKQA
DAYANTVLAGARGEAAQVLEEAEGYRARVVNEAQGEASRFLAVLEEYSKAPDVTRKRLYLERMEQVLGDI
DKVILDGEGSGSQGVVPYLPLNELRKSSDKENN
>gi|56696216|ref|YP_166573.1| HflC protein [Ruegeria pomeroyi DSS-3]
MRKSTFLLPIVVVLVALGLSSLFIVDEREKALVLQFGRVIDVKEEPGLAFKIPLIQEVVRYDDRILSREV
GPLEVTPLDDRRLVVDAFARYRIVDVRQFRQAVGAGGIATAETRLDSILRAKTREILGSVSSNDILSSDR
AALMLRIRNGAIFEARDLGLEVIDVRLKRTDLPEANLNATFARMRAEREREAADEVARGNEAAQRIRAQA
DRTVVELVSEARREAEIVRGEADAQRNGIFAEAFGKDPEFFEFYRSLSAYEKALQGGNSSMVMSPDSEFF
NYLKSPSGRSE
>gi|56696217|ref|YP_166574.1| hypothetical protein SPO1331 [Ruegeria pomeroyi DSS-3]
MIPGHECRQMRQNRNSGIEMRLIYACLTALTLAAPALAEPAIVLGDTAYDTYGKRVSVSSVVRLATITGD
RASMSATRAYLPAGKILLVGRGPLCRKQSLDLWCFAVTQDGLPVYVRADSKGYFKADGYDGFIAVAQRPG
AVQTTDGRVLEYSSSERYQLVDHSEDTVTLAVGPENRKPGFDAATTVEIPREDSDFVFVDTDELRSDTSY
APIRPLTRGDALARLGADIIGLDLDAQSFREARDFFERLLVEEKNCSDEITLEQSAGIELAAGVGGLLSA
IDAKLQITATYAKSTSYPKGMQMRALRYVQDLPGEGARFFEIWERLSHEDDSCKGVVSARLTGADDAERG
GESGEITTQSARDMGLGVSESRKFPSYSCDREYFTALDHLTSADGRLSQAAAELLVTYAMRYQGDGGIKS
CRNRGATG
>gi|56696218|ref|YP_166575.1| hypothetical protein SPO1332 [Ruegeria pomeroyi DSS-3]
MSGLLLLGLGLVLIVEGAVYALAPGIVERLLDILRSLPLAARRQTGLLSMVIGLILVWAAYQIGF
>gi|56696219|ref|YP_166576.1| periplasmic serine protease [Ruegeria pomeroyi DSS-3]
MTTNARLMALAGLSVLFLLLQTLIAQARPESLAPLADKVSPAVVNITTSTLVEGSTGPQGIVPEGSPFED
FFREFQDRNGGGDRPRRSSALGSGFVISEDGYIVTNNHVIAKADEILIEFFPGDGQPARELPAKVVGTDE
NTDIALLKVEADGPLKYVKFGNSDTARVGDWVMAMGNPLGQGFSVSAGIVSARNRALSGSYDDYIQTDAA
INRGNSGGPLFNMDGEVIGVNTAILSPNGGSIGIGFSMASNVVTKVVGQLREYGETRRGWLGVRIQDVTE
DMAEAMGLEKTGGALISDVPEGPAKEAGLKAGDVIVSFDGAEVRDTRDLVRRVGESEVGKSVRVLVFRDG
GTQTILVTLGRREDAERAGSGSEEEGEGGQTTPEASKKEFLGLTVSVLTAEMRAELGLAEDATGLAIVAV
DEASEAFEKGLRTGDVITEAGQQKVATLADLETRIDEAREAGRKSLLLLVRRGGEPRFVALSLGQ
>gi|56696220|ref|YP_166577.1| hypothetical protein SPO1334 [Ruegeria pomeroyi DSS-3]
MTPTRIDSKAAGFPGRLSFVRKVMMTDLLETLLDCETRVWQALVDGDAAADEAALDPGFLGVYSDGFSGR
AEHAGQLADGPTMTRFALSQARVLDLAPGCALLSYAARFRRVGRETDEEMYVSSIWRQQPDGTWCNLFSQ
DTPSLA
>gi|56696221|ref|YP_166578.1| Crp/FNR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MICLPETGFLAEASPRLKQMLAAQAAEIGLARGDTLFKQGDPGDALYAVLSGALEISILSLDGRKLSLDL
VGPGAVFGEIALFDPGPRTATVSAAEPARVLRVLSADVMAELRRHPELAIDMVRLAGQRMRWMGGQLNEQ
VFLPVPTRLARKLLHLAPHHDAGGATVRLSQAELAEYVGATREAVSKTLAHWKRMGVIEVARGTLAIRDP
QALRALADPDQI
>gi|56696222|ref|YP_166579.1| intracellular septation protein A [Ruegeria pomeroyi DSS-3]
MAADKDINPILKQVLELGPTVAFFLIYLRLKEKTFQIAGTDYSGFIVATLVFIPILLAAMGVLWALTGKL
SRMQIFTAFMVIFFGGLTAWFNDERFFKMKTTLVYGVFAILLGIGLMRGRSYLAYVLGDVLPMRDEGWMI
LTRRLCGAFTGLAVANELVWRNMSTDLWVKIETFGFPILLMGFIMLQFGLLQAHMIDPDQEQG
>gi|56696223|ref|YP_166580.1| hypothetical protein SPO1337 [Ruegeria pomeroyi DSS-3]
MSDWLISLEGTPAGHDLALALAIMAAFLHAVFGALQKGRHDPWLSRGAIDGAYALMAAPFALFVVPWPEP
HMWLIFATAWLIHVFYKLFQAMAYTRGAYTVVYPVVRGTGPLFTVIGAYLLFGETFTALQWLGVGVLLAG
IFGLAVYNMIFLDTARETLMPALGLAVITGLFVALYTTYDAYGIRATADPFTFLAWFFFIDGPVFPVIAG
LRWRAMIHRPAPGPLILRGFAGGITAFLSFGAIMLATRLDKVGEAAVLRETSTVFAALIGWLVLKETVGP
RRIALMGLIAAGAVIVEMGG
>gi|56696224|ref|YP_166581.1| signal recognition particle-docking protein FtsY [Ruegeria pomeroyi DSS-3]
MAFFSKLKDRLFKSSSKIEQGLDAIVEDGGVEEAVTATQPDPVIPQPDPEPQPVPELPDTPEMPEPQPVD
PTPAPMPPEAPQPIDPAPPAEAGTGRGLLGRLFARPGGATVVRRTLDDDMLEQLEELLIAADMGVDTALR
VTANMAEGRIGRKLSTQEIKALLAQEITRIMEPVARPMPLYPKRPQVVLVVGVNGSGKTTTIGKLASQFK
AAGKKVVIAAGDTFRAAAVEQLQVWGDRAGVPVLTAPEGSDPASLAFDAMTRAQEDGADLLLIDTAGRLQ
NRADLMEELAKIVRVIRKKDDTAPHNTLLVLDATTGQNAISQVETFQKLADVSGLVMTKLDGTAKGGILV
SLADRFGLPIHAIGVGEQIDDLAPFDPEDFAAALTGFERG
>gi|56696225|ref|YP_166582.1| hypothetical protein SPO1340 [Ruegeria pomeroyi DSS-3]
MSQTLFWIAAACALAYLAMTARPASLMRSAVKTASVALLALMVLVSGGPVLLVLALALCALGDWLLSRET
EATFMAGVGAFAAGHLAYVALFLTHPASDTGQLAAQWPLVAGLAALGLVMASLLAPRAGDLKGPVLAYVP
IILGMGLAALTLPQAGVLAWVLPAAAAFIASDMILATEKFLLPPGHPALRLTPYLVWPLYWGAQMGFALA
LT
>gi|56696226|ref|YP_166583.1| alkane-1 monooxygenase, putative [Ruegeria pomeroyi DSS-3]
MTWAAPGEQGDFRAGDAMLSRSTDTEGARMYRYILASLSPYAVLGAACLLGGGWAWGALIWMTVYVAVMD
KLPVRPLAAADWAGAQVLPLVLAGAHFALLALAIPALVQGALTGAQAVALGAAVALCFGQVSNSNAHELI
HRADRWQHWLGAAIYVSLLFGHHTSAHMRVHHLWVATPRDPNSARLGQGFWAFLPRAWVGSFRAGLTAER
ALRKGRGATPYRAYLAGAGAMLAAAWLLAGGRGILALVLLAGYAQIQLLLADYIQHYGLERKALANGRYE
PARAHHSWNAPHWYSSAMMLNAPRHSDHHQNPGRDFAALRLDPEMPQWPYAMPIMAVLATVPPLWRRVMD
PRVHAVCGARE
>gi|56696227|ref|YP_166584.1| hypothetical protein SPO1342 [Ruegeria pomeroyi DSS-3]
MMRLALILTLMAPAAVAQPVMSAEEFDRYTLGKTLFYGFDGTAYGVERYLSGRRVIWSFLDGECKEGIWY
EAAGQICFVYEDRPDPQCWVFRDTGGGLVAQFEGDPTQTELYEAEEIGEEMLCYGPDVGV
>gi|56696228|ref|YP_166585.1| glutathione S-transferase family protein [Ruegeria pomeroyi DSS-3]
MLTIWGRRTSSNVQALMWCVGELNLAHIRHDAGHRYGGLDTPEFGRLNPNRTIPVLKDGTNPPIWETGAI
LRYLATRYGKDSFWPSDPVRRARVDQWAEWAKLNVAQAFTAPVFWRVVRTAPQDRDPAAIARALAELEAK
LALAEAQLSRHAHIAGDAFTLADIQLGHILYRYYDIGITRAPLPHLHLYYQRLSARPAFRQHVMVPYDEL
RVT
>gi|56696229|ref|YP_166586.1| exodeoxyribonuclease VII large subunit [Ruegeria pomeroyi DSS-3]
MPEFTVTEISGEVKRTLEGSFGRIRVRGEVGRVFQARSGHLYYDIKDDRNVLACTTWKGQVASLSVVPEE
GLEVVVTGRLTAFGAQSKYNLNVDEVAVAGQGALMALLEKRKKQLEAEGLFAPERKRPLPYLPQIIGVIT
SPQGAVIRDILHRLRDRFPRKVLIWPVAVQGANCAPEVARAIEGFNMFSPGGALPRPDLLIVARGGGSIE
DLWGFNEEIVARAAAASQIPLISAVGHETDTTLIDFVSDRRAPTPTAAAEMAVPVRLELLAWTGEQGARL
SRAASDAVQRRAQRLRDLSRALPRPDSLLDTPRQRLDRAAERLPAALTQGVQRRRLRLAELSAPLRPASL
RALVSARRDHLAHLGSRLSPRALEREIAAQGERLTRLSDRLNSAQTTRIERLRQRLESADRLRETLGYKA
TLARGYAVVRDDQGALLTTRAQAAKAAALQIEFADGTLDTGGAPAKPASKPKQKPPEQGSLF
>gi|56696230|ref|YP_166587.1| phosphoribosylamine--glycine ligase [Ruegeria pomeroyi DSS-3]
MNILILGSGGREHALAWAVMQNPKCDKLIVAPGNAGIAQIAECAELDIMDGGLVATFAEENAIDFVIVGP
EAPLAAGVADRLREAGFLVFGPSAAAARLEASKSFTKEICDAAGAPTAGYARFTQAGPAKDYIRAQGAPI
VIKADGLAAGKGVIVAMDEATALEAIDDMLGGAFGDAGAEVVIEEFMEGEEASLFVLVDGEEVLSIGTAQ
DHKRVGEGDTGPNTGGMGAYSPAPVLSAEVEARAMEEIVKPTMAEMARRGVPFQGVLYVGLMIKDGAPRL
VEYNVRFGDPECQVLMLRLGAQAMDLMHATAEGRLREARVNWAEDHAITVVMAANGYPGSYQKGSEIKGL
DTLPEDSRNMVFHAGTAAREGAIVATGGRVLNVTARGDSLAEARDRAYAMVEAIDWPGGFYRRDIGWRAL
>gi|56696231|ref|YP_166588.1| LuxR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MPGPVDKDLLDNAYATRELRGLAFDWVPVGIVVTEARVIREVNHRFCSMFGYEREELLDRLFVFLYPSDE
EFQNILHRGDKDLGEGNLYWDERVMRRRDGELFWCRVRGQTFTPEEPLARAVWTFADLSEIRRYQPLSRR
EREVYSLLGEGKTSKEIARELDLSYRTVEVHRARLLKKFGVSNTAALFQSLGDIGGEHVVPSAG
>gi|56696232|ref|YP_166589.1| hypothetical protein SPO1347 [Ruegeria pomeroyi DSS-3]
MTGAMPAPAGTGFPDGIARNSDKAPRRPLRPLHTLLRGAALTWCLWLAPVGAWACEARYAEHGLPGRGAE
TSFSNRTAAGRHEAWAPRDADLRFHAAYAVETDEYGHGVLGGLKDAKALTIHVSRPGDPRITCPAEATLP
PGAVFEDIAPHLADLDGDGLPEVIAVRSTVNDGARLEIYDRRARLLAATPPIGTRNRWLAVLGAADLDGD
GFMEIAYVDRPHLAKTLRIWRYRDGSLTQIASLRGLTNHRIGEEFITGGLRDCGSGPEIILASADWRQVV
ALRHDDEWQSRALGAFSAGAVAAALSCKTR
>gi|56696233|ref|YP_166590.1| iron-sulfur cluster-binding protein [Ruegeria pomeroyi DSS-3]
MAKITYIEHNGTQHTVEVANGLTVMEGARDNNIPGIEADCGGACACSTCHVYIHPDWVEKLPAKDDMEED
MLDFAYEPDPARSRLTCQLKVTDALDGLVVQMPEKQI
>gi|56696234|ref|YP_166591.1| putative lipoprotein [Ruegeria pomeroyi DSS-3]
MMSRSALFCALALVGLSGCDTGLPDVDALREPEVSRFTAEAPPGAAPGTCWGKQVTPAIIETVTHQVMLQ
PAEIQSDGSVLQPAVYKTETRQEIVRERKETWFETLCAQELTPDFVASVQRALAARGFYRGAPSGEMDAR
TRAAVRRYQEPQGLDSGILSRAAARDLGLVAVDRG
>gi|56696235|ref|YP_166592.1| hypothetical protein SPO1350 [Ruegeria pomeroyi DSS-3]
MQSVSQSCHEEISRVAGAEFCKNSDPENVPFSGPVFM
>gi|56696236|ref|YP_166593.1| O-succinylhomoserine sulfhydrylase [Ruegeria pomeroyi DSS-3]
MSTDWSKRTQAVHGGTRRSQWGEVSEAIFLTQGFVYETAEQAEARFIDCGPDEFIYARYGNPTVAMFEQR
IAALEGGEDAFATASGMAAVNGALVSMLKAGDHVVSAKALFGSCLYILENILTRYGVEVTFVDGTDLEQW
RAAVRPETKAVFFESMSNPTLEVIDITAVAEIAHSVGAKVVVDNVFSTPVFSRAIQQGADVVVYSATKHI
DGQGRALGGVIIGSREFIRGTVEPYLKHTGGALSPFSAWIMLKGLETMALRVNAQAETAQKLAEALEGHP
ELVRTLYPGLKSHAQNALIQSQLGGKGGTVLSLDLRGGKPAAFRFLNALTIPVISNNLGDAKSIATHPAT
TTHQRLSEAQRAELGITPGLIRFSVGLEDAGDLLADLRAALDSSAG
>gi|56696237|ref|YP_166594.1| putative GTP cyclohydrolase [Ruegeria pomeroyi DSS-3]
MNLHPRDIDETPDRDAAAAALAVLRRWASGATSTEISELDPSVARLLPDAALSNYPDLSRQYPEDFTVDA
TYRAGLPDLQNGPSSLIRGAKQQIQHVGISNFRLPIRFHRKEGDDLTLETSVTGTVSLEAGKKGINMSRI
MRSFYKHAERTFSFEVIEAALDDYMTDLDSFDARIQMRFSYPERIESLRSGLSGYQYYDIALELVEQGGE
RLKIMHLDYVYSSTCPCSLELSEHARSSRGQLATPHSQRSVARLSVVVDGDASCLWFEDLIALCRRAVPT
ETQVMVKREDEQAFAELNAANPIFVEDAARLFCAELLADHRIGDFRVVASHQESLHSHDAVSVLTEGATF
ATASLDPRLFATLFHVG
>gi|56696238|ref|YP_166595.1| Trk system potassium uptake protein TrkH [Ruegeria pomeroyi DSS-3]
MLDMRPVGYVIGLLVAILGATMVFPLAADLIEGRGEWPVFLQSGVITVLTGAILALSCANGVREGLTIQQ
TFLLTTLVWVALPLFGALPFMFGATELRFVDAFFEAMSGLTTTGSTVISGLDGLPRGLLLWRGVLQWLGG
IGIIVVAMVFLPELRVGGMQIFRSEGFDTMGKILPRAQEIAGQITVIYVALTFACALVYGALGMSFFDAL
VHSLTTISTGGFSNYDASFGTFSGLPEYAASVFMILAALPFVRYVQMVNGHSAPLFQDSQVHVFLIVIAL
LVGVTTVVLTTVFPHHVEQAFREALFNITSIISGTGYASVDYMGWGGFLVTMFFVIGLIGGCAGSTACSV
KIFRYQLLFASIKVQLQRIRTPHGVFLPRFQGRPIGPDVLGSVMSFFVFFIVTLGVLAWGLALTGLDFIT
ALSGAATAIANVGPGLGEQIGPAGNFAGLNDAAKWMLSVGMLIGRLEVMSVYVLFTVQFWRA
>gi|56696239|ref|YP_166596.1| peptidoglycan binding domain-containing protein [Ruegeria pomeroyi DSS-3]
MQPPPQRQRHICPVPALAAALISPHRPAPRACPMAIAAISCITCGDDTYLKVRDPTMIRPLIAVLSLFYL
ISSAALAQQSADEVVWVQIEAQPNLRTAQERAQTYAADLSDVAGFSLGGGWYGIVLGPYLREDAEQVLRV
YRAERRIPGDSFIALSGALGQQFWPVGSDLLNRGAAVAPVEQTAPEPVAEATPQVQPEPADETPAQARRS
EQALSREERQALQIALQAAGFYNAAIDGAFGAGTRRSMADWQGFNGFEATGVLTTRQRKVLMDQYNAPLI
STGMARHRDTAAGIEMDLPLGVVRFSRYEAPFAHFDASGELGAQVLLISQPGDKATLYGLYDIMQTLEIV
PLDGPRERGSDSFTLEGRGNGIVSYTEAALSGGEIKGFTLIWPTGDEDRRARVLAAMRASFARTDGVLDP
AAGGDAVQSVDLVSGLEIRKPRLSRSGFYVDGKGTVLTVAEAVQGCTRVTLDGSYGAQVVDRDAGLGVAV
LRPEQALAPMVVAGLGQEMPRLGADITVAGYSYEGILGAPTLTFGTLDDVKGLRGETELARLGLMAQTGD
AGGPVIDDQGTVVGMLLPAPATGQQLPRGVSFAAKAQALRDVLSAAGMGAQQAETAGRITPDELNRRASG
MTVLVSCWD
>gi|56696240|ref|YP_166597.1| glycyl-tRNA synthetase subunit alpha [Ruegeria pomeroyi DSS-3]
MTHPTPTAPRSFQEIILRLQTYWASKGCAILQPYDMEVGAGTFHPATTLRALGSSPWAAAYVQPSRRPTD
GRYGENPNRLQHYYQYQVLIKPSPPDLQELYLGSLEAIGVDMALHDIRFVEDDWESPTLGAWGLGWEVWC
DGMEVSQFTYFQQVGGHDCAPVSGELTYGLERLAMYVLGIDHVMDMPFNDPQSPIPLSYGDVFKQTEEEY
ARWNFDVANTEVLLRHFEEAEAECAAILAQTHDDPKTGKRIVMAHPAYDQCIKASHIFNLLDARGVISVT
ERQAYIGRVRALAKQCADAFVQTTAGGYAAA
>gi|56696241|ref|YP_166598.1| FkbM family methyltransferase [Ruegeria pomeroyi DSS-3]
MDQATRDSYEEKLRKARRRLKRHVRTAQSEGFMTGAAAMLRPGDVVIDCGANVGDVTAVLSATGATVHCF
EPDPYAFSLLEERFGEATNVHLHNQAAGVAAGSIGLMRAESFGEDPRKNTVMSTTLPGGRGISAQAEDVI
EVEMIDFPAFLSGLIAEHGDIAMLKMDIEGAELDILEAMEERDLFDSVRVTLVETHERKFPDLRPRFRAL
KERIGEKYATSKVNLDWI
>gi|56696242|ref|YP_166599.1| sodium/glutamate symporter [Ruegeria pomeroyi DSS-3]
MTETLHISAFMTVTLGLAVYLVGVRINDRLPFLERFSIPEPVTGGLLASLVVLGLNSVFGIELAFDLTGR
DFLLVLFFTGIGLNARLGDLIAGGKPLAILLVLTLLTILAQNVIGVLGAVVFGFPPQAGVLFGSAALIGG
HGTAIAWAPEVAQATGLASATELGVAVATLGLVIAALIGGPIATYLVESRKLTPNRPDEELTVGLPNEMD
EEPPQIDHKSLMRVLLTLNVAILLGYGLQESIEELGLKLPLFVPCLLSAIVVGNLRTALFPRALRVSRTP
TLALISEFALGAFLAMSLMSLQLWTIAETGLALAVIIAAQTLFALGFILLVLFRAMGGGYRAAVLAAGFG
GFALGATPTAIANMTAVTKRYGPSPLAFIVLPLVSAFFVDIANAVVIQMIVNF
>gi|56696243|ref|YP_166600.1| glycyl-tRNA synthetase subunit beta [Ruegeria pomeroyi DSS-3]
MPDLLIELFSEEIPARMQARAGEDLKKRITDGLVEAGLTYAYAAALSTPRRLVLAVEGLLDASPTQREER
KGPKVGAPEQAVEGFLRGAGISRDQLEERETPKGAIYFATIEKPGRPAAAIVAEVLEDTIRNFPWPKSMR
WGAGSLRWVRPLQSILCILTTEAGAEVVPLDIDGIKAGDSTAGHRFMAPARFSVTSFEDYQVKLKRAFVV
LDPAERAEHIWNDAQNMAFAAGLELVEDKGLLAEVAGLVEWPVVLMGQIGSEFLDLPAEVLQTSMREHQK
FFSVRNPKTGRIERFVTVANRETADNGATILAGNQKVLSARLADAKFFWDNDLRAAHAGMDAWVQALENV
TFHNKLGSQGDRIRRIAALARELAPVVGAEADQAEQAATLAKADLSSEMVFEFPELQGLMGRYYIAASGQ
DAAIAAVAQDHYSPLGPSDEVPTAPLSVIVALADKLDTLTGFWAIDEKPTGSKDPFALRRAALGVIRLVL
ANDLRLPLDRSIDAQLLRHKYHASNGEAALRDLIEEIADHGVFGAAFETIKEKLGDAGALEALAGDVPDL
SADLLAFIHDRLKVFLRDEGIRHDVIDACIAMAGNDDLNLLVKRARALNTVIATEDGENLVQGFKRANNI
LTQAEEKDGVEYSFGADIKFAEADSEKALFAALEQAESKINVALKAEDFAAAMTAMAALRAPVDAFFDQV
QVNSDNQVVRRNRLNLLSQIRKVCSSVADLTRIDG
>gi|56696244|ref|YP_166601.1| pyruvate phosphate dikinase [Ruegeria pomeroyi DSS-3]
MLPVRTWCLRRLQTPLFCTQTRGAAVQNNPNTTLITSTAPVATSTHGGRAKCLQRLVRLDLPVPRTVALS
FGAVHDIAQGQLPDIAAIVSQFDPTALLCVRPSSEDPDWGGPGAVLNIGMNDARFVELSDRMGAEAAAAL
YLRFVQTFAIHVARLDPDVFDEIEADGREGLRQSLRAYEDETDESFPQDPGEQLAAVLRSMARAWEGTSA
RLLRQAKGAPADAGLGLVVQEMIPGLGQGECGSGVLQLVEPATGLPQITGRYLSQSQGRDALGAGAEALY
LEKDPRGISLEDVAPEAFAALKQHAALMREKLREEMQVEFVIESGRVHILDGVRVPRSARAALRIAVRLA
EDGIIPQQEAVMRIDPHSVNELLHRQVHPQARRDVLTTGIAASPGAATGKIVFTAAEAQASAARGEPCVL
VRRETSPEDVRGMHAAVAVLTERGGMTSHAAVIGRGLGLPCIVGASDMEFQTKARQIKAPDGRVFRTGDI
LTIDGSTGQVLAGQPEMIDAALDDSFQTLMAWADAERDIGIRANADTPADAQAARNFDAQGIGLCRTEHM
FFEPGRLTVMREMIFAATPSGRKAVLERLLPMQRQDFVQLFRIMEGKPVCIRLFDPPLHEFLPTTRSGQR
ELAEALDLPVSDVTRRVEAMSEYNPMLGLRGVRLGVTVPEIYDMQARAIFEATLEASRKGEPVVPEVMIP
LVSAKREVELVKARIDAVASAVASERGQEFDYRLGVMVETPRACLRADEIAACVSFLSFGTNDLTQMTYG
LSRDDAGRFMSAYVRQGVFSEDPFHVLDRDGVGELLKLGVERGRRGQPGVTVSVCGEHGGNPESIAFCRA
AGFDYVSCSPFRVPVARLAAAQLAISDKLGISSD
>gi|56696245|ref|YP_166602.1| hypothetical protein SPO1360 [Ruegeria pomeroyi DSS-3]
MKRFVLTVLLSAAVTLPEFAFADRGSEAVGAAEQAEAPRKGKSFRNYLRALLPKPEEEAPVTAVDFSRSW
IDQQPRAEGGEQWQCLAEALYFEARGETIKGQFAVAEVILNRVQSERFPNTPCGVIRQGTGRKYQCQFTY
TCDGRKEVIAEKQAYERVAKVARLAMDGAAESLTDGATYYHTTAVRPSWARRFTQTTKIGVHLFYRQGQR
TASN
>gi|56696246|ref|YP_166603.1| multicopper oxidase domain-containing protein [Ruegeria pomeroyi DSS-3]
MTFTRRHVLKTATACALMPRLAEAAPITLTAMEARQQIAPEGYPDTAIWGYEGGAPGPEIRVAQGGRLSR
RLINRLPQPTAVHWHGIRIDNAMDGVPGLTQQAVPTGGSFDYDFTLPDAGTYWYHSHNRSMEQVARGLHG
PLIVDEASAPDIDGEHVLVLDDWRLDPDTAAIGANFDNGHDLSHAGRIGNLLTVNGRFDPAFRARPAERL
RLRLINAANARVFEVGLDGMQGWIVALDGMPLEEPLVVSGAFPLAPAQRADLIVDITAETGASASLLSIE
RDGGYGLCRFDVSGQGAGAARAAPAPLPPNPLPVIEGLADSPLHQMRLQGGAMRWLDSALLGETEMSGRE
LAQLGKFWALDGRADRSATPFLEAARGSLHRIAFVNETGFDHGMHLHGHHFRLIAPNGALGPWRDTVLVA
PGETRQIALVADNPGDWLLHCHMLGHAAAGMTSWFRVT
>gi|56696247|ref|YP_166604.1| dihydroneopterin aldolase, putative [Ruegeria pomeroyi DSS-3]
MSSEIRLAFAHPSERSEATASRGPLDRISLRDHVVEVEIGAFQAERGTTQRICFNVVVEVMPLTGPIDDD
VDRILSYDRVTEAIARALAEERLNLLETLAARVAELILHEPQAVRVFVRIEKLDRGPGALGVEIVRGRDK
LHVDQNEDLRPHPRLVYLSNAAIDSAHLKGWIDQLEHRERPLIICVGASSLAVPQTGHAMTQRRIDLLAI
EQNAWRLAARDLRCKVVSTRTELDWAMKNGQICVWAPSKIVLDAVDGPSAKPSEAVALAAWFAATFEAGE
MLVIGAALPEGTEVPLRAVPVEQAEL
>gi|56696248|ref|YP_166605.1| dihydropteroate synthase [Ruegeria pomeroyi DSS-3]
MGQAHLMGILNVTPDSFSDGGRHFGIEAARRVALEMVAQGVSLLDVGGESTRPGALEVPAEDEIHRTAPV
IEAIRAETGTAISIDTRKASVAEAALAAGASLVNDVSGFTFDAALAPLCAETRTPVCIMHAQGDPATMQQ
DPHYDDVLLDVYDFLAAQVDRLVARGMARGQIVIDPGIGFGKTQDHNLTLLRNLSLFHGIGCPILLGVSR
KRFIGTIGKEPRAQARGPGSISVGLAGLAQGVQILRVHDVAETAQALRLWAAVR
>gi|56696249|ref|YP_166606.1| phosphoglucosamine mutase [Ruegeria pomeroyi DSS-3]
MRKLFGTDGVRGTANTHPMTAEMALRIGAAVGRYFRREAGGVHRVVIGKDTRLSGYMFENALTAGLASTG
MNVLLLGPVPTPAVGLMTRSMRADLGVMISASHNSAEDNGIKFFGPDGFKLSDQAEMEIEEMVATGVRLA
QAHNIGRVRRVDDARFRYGERVKSSLTRGLRLDGLKVVVDCANGAAHRTAPEILWELGADVVPIGTSPDG
LNINRGCGSTCPRTASEAVVAHGADVGICLDGDADRVIVIDQLGNVADGDQIMALLAARWAAEGRLQGGA
LVATVMSNLGLERFLGDRGIGLERTAVGDRYVVERMREGGFNLGGEQSGHIVMSDFATTGDGLMAGLHFL
GEMMRSGQPSSELVRQFVPVPQLLKNVRFAKGQTPLDAASVQSAIAEAEGVLNGSGRLLIRKSGTEPLIR
VMAECEDEALLTRAVDSVVEAVADAVQA
>gi|56696250|ref|YP_166607.1| hypothetical protein SPO1365 [Ruegeria pomeroyi DSS-3]
MTQSPDITAKSWAMVATLGFVWGGTFLINELALEGITPFWLAAGRVCFGALLSTLVWRAMGGRLFSAPLS
GSERLSLVIIALLSSAVPFSLIAWGQQYVTAGFTGVSMASIALMVLPLAHFFVPGERMTWRRALGFAIGF
AGVALLMGAQAFESSGAALELPGRLACLAATACYAVASILMRRLPAVDPMGLSTVLLLIGVVAVLPMAWI
AEGPPPSTDLRTLGLIVFLGMVPTAAANLLRVTLIRSAGPVFMSLTNYQVPIWSVLLGAALLGEPLPPVL
LWSLLLILGGVGLSQYGALRRLFTRQ
>gi|56696251|ref|YP_166608.1| ketol-acid reductoisomerase [Ruegeria pomeroyi DSS-3]
MRVYYDRDCDINLIKDKKVAILGYGSQGHAHALNLRDSGAKNLVVALREGSASAKKAEGEGLTVMGIAEA
AAWCDVIMFTMPDELQAETYKKYVHDNIRPGAAIAFAHGLNVHFGLIEPKEGVDVIMMAPKGPGHTVRGE
YTKGGGVPCLVAVHTDATGKALEIGLSYCSAIGGGRSGIIETNFREECETDLFGEQAVLCGGLVELIRCG
FETLVEAGYAPEMAYFECLHEVKLIVDLIYEGGIANMDYSISNTAEYGQYVTGPRILPYEQTKASMKAVL
TDIQQGKFVRDFMLENAVGQPTIKASRRANDEHQIEQVGQKLRDMMPWISAGKMVDKSKN
>gi|56696252|ref|YP_166609.1| AsnC family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MLDDIDRRILRHYQADPSLSAGELAERCRITSGVCWRRIEKMQAAGIIQGQEAVIDWAALGFAVEVSLRV
TLDKTQPRAFDDFIEAARKVPEVIEIQTFLGRVDVRLSVIARDMAHYQQLYRDRILTLPHIADIEALMHI
ARLKRDEVLPV
>gi|56696253|ref|YP_166610.1| AsnC family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MTELDEIDRKLLRALAQDATQSAGALGRRFGLSQPATWRRIRRLEEAGVIKGRRLRLNAEALGFGVTVFL
GVKLARKGRVSLEDFERAVSAIPEVQTVEHVLGLYDYRLRVVARDLSDFERILRRRIMTLPGAGEVEANV
LLSEERLPGPIG
>gi|56696254|ref|YP_166611.1| GntR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MKQQKRTSFHAVRDEVKRRIESRIWPQGTLLPTESDLAEEFGCARATVNRALRELAEQGFVERKRKSGTR
VKTAPVRQARFEISLARRVVEEQNGDYRYALVERAEIAAPAWLSSQLGLPPGTRVLHLLCMHYADNRPFQ
LEERWVSLAAVPAMEQADLSRIGPTEWLMTAIPFTDAEIAFGAIGADSRLAEFLSTSVGMPVMQMERTTW
LKGQPVTFARLTHHPGFRVRTAY
>gi|56696255|ref|YP_166612.1| aminotransferase family protein [Ruegeria pomeroyi DSS-3]
MAALLETVDPEGLEEFSVVFTDRSLNHMSSVFQQVMRDISGMLGAVYNTDAVAVIPGGGTYAMEAVARQF
ARGARVLVVRNGWFSYRWSQIIETGGLTAETTVMKARRSGNESTAPFAPAPIEDVVTAIREQKPDVVFAP
HVETAAGVILPDDYITAMAAAAHEVGALMVLDCIASGCVWVDMKATGVDVLISAPQKGWSASPCAGLVML
SERAEARLAETQSDSFAIDLKKWRDIMKAYEGGGHAYHATMPTDALRAFRDTMAETRDYGFERLREAQWA
LGNGVRALLRDKGIVSVAADGFGAPGVVVSYTSDPDIQNGKKFAALGMQIAAGVPLQCDEPADFRTFRLG
LFGLDKLYDVEGTIARLKRVLDQVL
>gi|56696256|ref|YP_166613.1| 2-octaprenyl-6-methoxyphenyl hydroxylase [Ruegeria pomeroyi DSS-3]
MHESCDILISGGGIAGLTAAAAFGSAGFSVICVDPAPPVTKRDVDGSDLRTTAFLQPAQVLLDNCGLWAR
LADHAAPLQIMRIVDAGGEVPEPRVVRDFNAADLSDRPFGWNLPNWLLRREMVARLAELPNVDFRPGTAT
SSLFTRTAEARVGLSDGSRVTCKLVLAADGRSSPMREAAGIGVKTTRYGQKALAFAVTHPIAHQNVSTEI
HRSGGPFTLVPLPDWQGQPSSAVVWMERGPKALELLDMAPEAFEAAMTERSCGLFGPLKLASRRTIWPII
SQSAERLSGERIALMAEAAHVVPPIGAQGLNMSLGDLRSLLELAQARPEDLGDAQMLAAYHKARHAEIEL
RVKGIDLLNRASMVEARPLRDARAMGLNALYSLAPVRRTLMQMGLGVR
>gi|56696257|ref|YP_166614.1| hypothetical protein SPO1372 [Ruegeria pomeroyi DSS-3]
MSAIDLPRNLPLGQRLLFSVPLLGRIAKEVAYGDSDNIYYAIVAGLSLWGIAILLFGIPGLYIPALALVP
VIWTLLILITRG
>gi|56696258|ref|YP_166615.1| hypothetical protein SPO1373 [Ruegeria pomeroyi DSS-3]
MTLKYARGPVSYLYRDVEKNGKTSRRKVKQVLWGDWIDVRDPIDATWAHVRYGKKPYLMKRAELQDERVL
ELIFLDIGQGDACILTEPGHHHPPRVMVIDAGIGRNTNGFLNWRFRDFDNSGQIHAAIVTHPDADHYRGF
QPIFENRRLRIDHVYHSGLVERVGDDLLGPEQGGYLSDIVASDAQLRPLLADPARRGRKLYPKLMQTALE
TDRIGPVTALTTTHAVQENGRAWLPGFAPADGGLITIEVLGPVVEPDAAGQPRLRAFGDRPTSRSMDEGK
TKNGHSVLLRLDFNGFRVLFGGDLNTSAECFLMQHYGGVPVSAPLAASAAELAAIARPEAIAAAGERFGV
DLMKICHHGSSDVTEEFLQAAHAAAYVVSSGDEEGHVHPRPDLLGLLGKMGAGARPLLLSTELLRSTRER
ERDDLRPTLDRLNGRIEAELARGAAADATALKEMRAAKRKLLDEVFRRNVGVYGAINLRTDGRDAVIAFR
KEKAPAHRRWFYYEMRRDPDSGGFLPVLGDGH
>gi|56696259|ref|YP_166616.1| pyrimidine 5'-nucleotidase [Ruegeria pomeroyi DSS-3]
MVREAFSHVTTWVFDLDNTLYPPAMRLFDQIEVRMTAYVMEALGVTRAEADRLRAHYWRQYGTTLAGLMR
EHGLDPDPYLVAVHEVDMSHMTPDTALASHIRALPGRRIVYTNGSAPYAERVLAARGLTGLFDAIYGVEH
AGYRPKPERAAFEEVFTRDGVIPERAAMFEDDPRNLTAPHEMGMRTVHVAPDPHPADHIHHHTDDLTAFL
SRLT
>gi|56696260|ref|YP_166617.1| GntR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MTQGRPAQKDAYHLILEAIDSGIYKPGDRLVESELAERFGVSRTPIREALQRLETQSLLERDGRSMIVAS
LDHNQMAELYQVRRELEGLAARLAARHATAEEIAVLRDMVVADDKLVGNPQALSRANRRFHEQIHLASHN
RYLVQQLDLVHRTMALMATTSLAAEGRGEIAQNEHKGIVEAIAARNEDAAEKALKDHISIAFMTRLKLDA
DSRERR
>gi|56696261|ref|YP_166618.1| glycosyl transferase, group 2 family protein [Ruegeria pomeroyi DSS-3]
MSGLHIMSDLHLRLSSASLAHPAPEPHLPLGRYLVRSGVISQAQLVQALQMQLRLDAPIGEILIAEGWAE
PNDILRALALQNGVQWADLASDPPRAELCGLMPLDFWLRHGAIPWMRLGPMVIIATARPDRFDQLRAEMA
QTGILLMPALSSRDQIDTALARHYAPTLAQLAETRVAPLYSCRTWNWRSRIAGSVVLLSLLILLLLAPIK
GLTLLFLAAVFTLSLFAGLKAVALLAHLMNQSHLTAPHAPGLAAEIQGLRLPKISVLVPLYKEREIATAL
VTRLSRLTYPKALLDVILVLEEKDEVTRQTLSQCTLPAWMRVIEVPGHQGLTTKPRAMNYALDFCRGEIV
GVWDAEDAPVADQLEHVAAHFAQAPQEVVCLQGILDYYNPRSSWRARCFTIEYASWFRIVLPGIARLGLV
VPLGGTTLFFRRRVLEELGGWDAHNVTEDADLGVRLCRAGYRTELIDTVTYEEANFRPWPWVKQRSRWLK
GFMVTYLVHMRAPLRLWSDLGTRRFLGVQAFFLGTLGQFLLAPVLWSFWLILFGLPHPMEGVLSAPVLFL
CTAIFGATELLGLAIGLVAVSGAQRRFLIPWALTMPLYFPLGVLAAYKALYELMVNPYFWDKTQHGQACE
EKPAPPPGSSLEGARQQGFH
>gi|56696262|ref|YP_166619.1| carbamoyl phosphate synthase small subunit [Ruegeria pomeroyi DSS-3]
MAQNPLSKPTACLVLADGTVFYGTGFGATGQTVAELCFNTAMTGYQEIMTDPSYAGQIVTFTFPHIGNVG
VTPEDDETTDPVAAGMVVKWDPTAASNWRAAEELKGWLARRGRIAIGGVDTRRLTRAIRQQGAPHVALAH
DPEGKFDLAALIAAARGFAGLEGMDLAKDVTCAQSYRWDEMRWAWPEGYARQEAPKHKVVAIDYGAKRNI
LRCLASSGCDVTVLPATATAAEVLAHAPDGVFLSNGPGDPAATGEYAVPMIREILDTTSLPVFGICLGHQ
MLALALGGRTVKMNHGHHGANHPVKDLETGKVEITSMNHGFAVDAQSLPEGVVETHRSLFDGSNCGIRMS
ERPVFSVQYHPEASPGPQDSFYLFERFAAAMDAQKAEV
>gi|56696263|ref|YP_166620.1| GatB/YqeY domain-containing protein [Ruegeria pomeroyi DSS-3]
MDMRARVNTALKQAMKDKAADRLSTLRLINAAIKDRDIAVRGSGDEEAACCGDAEVLAILGKMTKQRQES
ARAYEEGGRLDLAERERQEISVIEEFLPKQLDEDEVESAVRAAITATGAGSIRDMGKVMGELKARYTGQM
DFGKVGPMVKDQLCAAGNC
>gi|56696264|ref|YP_166621.1| prephenate dehydrogenase, putative [Ruegeria pomeroyi DSS-3]
MTTRPGIAAPSEPVMSCHLTFRSVGLFGFGAFGRLIATHLTPHLPCLVHDPALPDGANLPAGLSIASQAE
AAGCDLVILAMPVAGIAEACRAIAPHLRPGAVVADVGSVKMTPAAIMQATLPGHVALIGTHPLFGPQSAR
HGIAGHKIALCPLRGRAHLPVAAFLRARLGLRVILTTPEAHDREAATVQGLTHLIAQAMNRMGPLPDRMT
TASFDLLKQAVEMVRHDPPGVLAAIESANPFAPRVREEFLGLIEGLDRAYAGRD
>gi|56696265|ref|YP_166622.1| hypothetical protein SPO1380 [Ruegeria pomeroyi DSS-3]
MYWPKPGSKRDLKKRWQKPDRIFFGFGACHILCGAYLKWPPLEGFYAEQILPASGFPGSHIYATDGVVSF
DYHGYALRENLLRHYEAGWQARYPGWTGRIELVDFDLLDTTALNMRKFWGPDQYPGDALKRAYNSIARID
HVTARNKALQTRPRNAVIDRPAAAS
>gi|56696266|ref|YP_166623.1| hypothetical protein SPO1381 [Ruegeria pomeroyi DSS-3]
MPYDWKRTETRQELRLWPHNSLPPRGAAGFVLLVFALGLLPLIAVLGSPLLWGLLPFLLLAVAGLWLAIE
ANYRQRRILEVLTLDPERAHLVRHNPRGAVQEWDCNRYWARATLHAHGGPVPHYVTLQGCGREVEIGAFL
SEDERIALYDDLREMLSK
>gi|56696267|ref|YP_166624.1| hypothetical protein SPO1382 [Ruegeria pomeroyi DSS-3]
MRQIMKATWSVFSMVREPVHILGRFVEHNLSAGASYVHLFFDDPDDPAYDTFANQPGVIAQRCDSAYWRG
LNRRRPPYVERRQLVNGRVAYERCLTDWQAHFDADELVVTRDSALGSQLATVPDSHQTAHLGTLEPMVPP
EDHDGPVPFRRSVRHLKFRARLHVYGDDLQVFRNGLFGHYQGKSILRAGLQGWGHGIHFPRPASAEIENA
IHEMDNAWIAHMHCENRDLWVNRTLNKMRDGSYNLRTGNYDILPYVAPEAAALDNPTEEDLLQLLTGFYD
RVSVLSEDLRQRMEDLDLLQYHEVRLLD
>gi|56696268|ref|YP_166625.1| cytochrome c oxidase, aa3-type, subunit I [Ruegeria pomeroyi DSS-3]
MADAAIHGHGHEDNRGFFTRWFMSTNHKDIGILYLIFSALAGLISVLMTVYMRLELMEPGVQYMCLEGFM
ADPCTPNGHLWNVMITYHGVLMMFFVVIPALFGGFGNFFMPLQIGAPDMAFPRMNNLSFWLYVAGTSLGV
ASMLTPGGNDQLGSGVGWVLYPPLSTTEGGMSMDLAIFAVHLSGASSILGAINMITTFLNMRAPGMTLFK
VPLFAWSIFVTAWLILLSLPVLAGAITMLLMDRNFGFTFFDPAGGGDPILYQHILWFFGHPEVYIVILPG
FGIISHVIATFSRKPVFGYLPMVWAIIAIGVLGFVVWAHHMYTVGMSLNQQAYFMLATMVIAVPTGVKVF
SWIATMWGGSIEFKTPMLFAFGFLFLFTVGGVTGVVLSQAAVDRAYHDTYYVVAHFHYVMSLGAVFAIFA
GMYFYFAKMTGRQYSEFWGKIHFWMFFIGANLTFFPQHFLGRQGMPRRYIDYPEAFAYWNKISSYGAFIS
FASFLLFFGIVFYALTRGARETRNNYWNEYADTLEWTLPTPPPEHTFETLPKQEDWDKGHAH
>gi|56696269|ref|YP_166626.1| MarR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MSKNDKSGEVSASDIFAFFNEIGIINQLSSTLLARTLPQGVHPSHFGIVNHLYRLGDGKTPISIASAMQV
SKNTMTHSLRVLVDHGLVTVVPNPGDARGKLVFLTPEGRRFREESIQRVAARFGHLFKPEHVEAMLRIRE
DLSSIRRHLDENR
>gi|56696270|ref|YP_166627.1| twin-arginine translocation pathway signal sequence domain-containing protein [Ruegeria pomeroyi DSS-3]
MKRRGFLKLAGGGVILAAGGAALFAATRSPGKALAPWATAGGTAYADPRMNALSYAILAPNPHNRQPWLV
SLEGEKTAVLRFDTERQLPHTDPFDRQLTIGLGCFLELMVMAAQANGYAVTLDLFPDGSSETGLDDRIVA
RARFREDPTLAPDPLWPYVPARRSNKEPFDTARAVSATDLDALLASTKHGTRLGGSVAPDEIGFWRELSA
QALRIEIETPRTYKESVELFRIGKAEINENPDGIDFSGPMFESLRLAGLFDRNVALDTGSVAYSQGIEAV
MDNCRSAMGHIWMTTAANTRMDQIAAGRDWLRANLAVTRAGLGVQPLSQALQEYPEMAELYHRVHNRLAP
DGGTVQMLARIGYGPDIPVSPRWPIEAKMVTD
>gi|56696271|ref|YP_166628.1| HIT family protein [Ruegeria pomeroyi DSS-3]
MTMAYDPDNIFAKILRGEIPSTRVYEDDDTLAFMDIMPRADGHLLVIPKTPCRNLLDASPAQLAAVMATV
QKLSHAVMAAFGAEGVTIQQFNEAAGGQEVFHLHFHVLPRHEGERLRPPGQMGDMAVIAEQAEKIRAALG
>gi|56696272|ref|YP_166629.1| cation efflux system protein [Ruegeria pomeroyi DSS-3]
MPHDHGAAPAHSHAHGHHHHHHHHHIDPAAGDARITWAIAVNMVLTLAQVVGGLLSGSLALIADALHNFS
DAVALIIAFGARRIARRPADARMSYGYGRAEVIAALINYTTLIVLALYLVYEGIMRFLDPQPIDGWLVVW
IAALALVIDLVTAALTWSMAKTSMNIRAAFLHNLADALGSVAVIVAGSAVIWFGWTWVDPLVTLMIAAYI
LWHVWVEIGAAIGVLMLGTPPGYEPETVAREIEAVEGVQSLHLLHLWSLQENAAALSAHLVIEPGAWGQA
DAIKARVKTLLEDKHGIAHVTLETECAAHACHDAQRIGSA
>gi|56696273|ref|YP_166630.1| LuxR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MIAACEERTSLVVEAEENTIRDEATYLTPPSREQVIAAIYETVLRPDLYEHVMAMWEAHIDALTRDADPE
TGSATDIDLDRELQKHFQRAHVILEQLGRKSPQSELELRVEGAPGLVMLAGPDRRVRAASARARTVLGGA
RDLSLVSGHLAGSGAQMLDRMVEAARSGDLRVPAVVLTTDIRPRHLIARVITCPDGAGQVMIEGLDYQWT
PAAERVLVASFGLSPAEVEIVRNLMEGRSLREIAQSSGRSEHTVRNQAKSVLAKTGAPGQVDLIRLVAFL
IDRGNQLRLGGHPGAVDLNDDVLDMGTGLRMQLYQCGDPRGRPVLYLHGMLDGMAPLEYLKHDFARRGLR
VLAPVRPGYGLSEPVAGVEPGLRAMASHAVELIDRFALDRVAILGHMAGAVTGYVLRAGGDPRLAGMVAV
AASGPLLRRAQLSGMARRQRMMAMTARWTPALLPFFVRAGIALIDSEEVGRFMDALYPPGSHERQVVDRL
ELAALMHAGYRFAAQSGTAGFEADALTMVSPWQRLSDGGTCPVVHLHGALDPVVPAAETARFAASISGAS
FRRFEDVGQFLIYERPDAVLDAIEAMLPPR
>gi|56696274|ref|YP_166631.1| lipoyltransferase [Ruegeria pomeroyi DSS-3]
MEWKITDGLTDYDAAVAFMEARAAAIAAGEAEECIWLLEHPPLYTAGTSARPADLTDPDRFPVYESKRGG
QYTYHGPGQRVVYVMLDVGKRGHDVRRFVEQLEEWVIAALAEFNIRGEIRPGRVGVWVRREDKPLTLGGQ
PAEDKIAAIGIRLRKWVSFHGISINVEPDLSHFSGIVPCGITEYGVTSLVDLGLPVTMGDVDVALRQSFE
RVFGAD
>gi|56696275|ref|YP_166632.1| thioredoxin domain-containing protein [Ruegeria pomeroyi DSS-3]
MTAHPPRPELQIDIVSDVVCPWCIVGFRQLDQALAATGVLARLRWHPFELNPQMGPEGQNLREHIMEKYG
STPEQSAEARARLTAIGAELGFTFNFTDDSRIVNTFAAHQLLDWAEGQGRQHPLKQALFAAYFTDGRDVS
DLSVLLDAVEAAGLDREAAQTALTSGAHQAPVREKQKFWAQHGISGVPSMVFGGKYLLTGAQGADTYAQV
IQRCLAEAA
>gi|56696276|ref|YP_166633.1| alkylhydroperoxidase-like protein [Ruegeria pomeroyi DSS-3]
MKGHATMRFNFTKETPQVYDAMLALNTAISQANPDSRLVHLTKIRASQINGCAYCVNMHVKEAQQDGLPD
MLLHLIAVWRETSAFTARDRAALAWAETLTRLEDSEVSQADFDAARAEFSEQEVAALTASIAMINLWNRM
AISAHLPV
>gi|56696277|ref|YP_166634.1| Rrf2 family protein [Ruegeria pomeroyi DSS-3]
MRRLGDGVEAALHCAAVLAELPEGKVLSGRDLAALHGVSESYLLKHMRALTAAGVTEAVPGPRGGFRLAR
APRQVSLLDVVEAVDGPGPAFVCREIRRKGDVTSNDPCAYRKDCFIKRRMLSAEQAWRTALRGQTLADLM
ADARAEIGFENLQAVGGFIEEKQR
>gi|56696278|ref|YP_166635.1| beta-lactamase, putative [Ruegeria pomeroyi DSS-3]
MMSYLDNNAFEATPQRVLDQFAAANTAAPAALMEVWRAGLSVAKAHGETELGSGQPASADDRFEVGSQSK
MMTAVLVLQLVQEGKVALDDKLSDHLDLSGLPDIANLETATIRHLLANRSGIPDFDTVMGDSGLPVFIEN
IIANPDVPQGPDEMLDIAAGHPAAFAPGQGYEYSNTNFLLLEKLIEKVTGNSMGHELTTRIFDPLGMDDT
LPGALERPADILHSYATLPDGTPLEVTNVPINLGGAGGVVSTTADMIRFLDALLVSKTLLSPEMLAQMTD
YRDGDNQPSGNGNGLGLGATELNGQHFVGFFGGTLGTNSGTILHVESGTIVSVAVTHSGVEPSTLVLTAF
ELIFSDGHWASFDPTDDSFTIEGSAAEVDLYQDTSATGAVETVLTKGDVSLSFAGDMAGFDEAQLSFSDG
SVLRVADAGGEWIDILHDTRLGDGGETVQAGPQDADNRLIGLGGNDGLFGAYGDDRISGGGGNDRLGGRD
GDDALEGGDGHDVLDGGRGDDQLSGGAGSDQLNGGRGDDTLEGGAGHDLLDGGRGDDQLSGGAGSDQLSG
GRGDDTLEGGAGHDLLDGGRGDDQLSGGAGSDQLSGGRGDDTLEGGAGHDLLKGGRGDDRLEGGAGHDML
IGGSGDDVFVFAATAGHDHVLDFQAGADRLDLSGAGVSFAELTITAPTDGFAHVAFGQTEITLTGQFSEL
TEADFLF
>gi|56696279|ref|YP_166636.1| AraC family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MSPPDLAPDIATFEVALAMALLVLSLFCAHALCQPRKALVVRWPLVVFFALNAIGLLRYVMRGLDPGMEW
PRTLLLLELANIPISLAQPALLWFYVCLLTGAGPLHLPRRALWHLLPALLAVGLVTVAAFQPQSTFDNLI
LPFAEMSWLERGLVLGFYLATVLFHLMGPVYSLLVIRQLMRYRIALKDLFASTERREMSWLRWLALMALA
FWCVNIVDVLLEVLEIGLPPINPWLDLTVLAAAHFLLVWVLGLWGLRQKPGLLPPERPTPTAPTPLPTPK
PMPPAPRKYGKSALSDSRMDRLADKIRLLMEVDHLYRDPNLTLWDLATRLGASTNHVSQALNEGVGQCFF
DYVNEWRARDAATRLRGSEDTVLDVAFAVGFNSKSAFYKSFRRVFETTPTQYRQRHRRA
>gi|56696280|ref|YP_166637.1| transporter, putative [Ruegeria pomeroyi DSS-3]
MFDVLRHRAYRHLFAAQVVALTGTGLATVALGLLAYDLAGPRAGIVLGIALTIKMLAYVFLSPLAAALTE
AMDRRRVLVTLDLVRAAAAACLPMVTEIWQIYLLIFVLQAASAGFTPAFQATIPALLPEEEDYTKALSLS
RLTYDLESLVSPALAALLLGLVSFNALFLGTALGFVGSALLVISVALPKPGASRTGGLATRSLRGLRLYL
SIPRLRGLLALNLGVAMPGAMVLVNTVVLVKSELGGSDRMVALALGAYGGGSMLAAFALPRLLARLGDRP
IMLAGGAAMALTGLALALWVALAGLSAPPLLLAWFVSGIGFASALTPSGRLLRRSAGPEDLPALFAAQFS
LSHACWLLAYPLAGWLATIVPPQGVLTVLALLGAIGCLIAARLWSGAKPGDGVGDTGSASSRTPGETTCK
TPISS
>gi|56696281|ref|YP_166638.1| hydrophobe/amphiphile efflux-1 family protein [Ruegeria pomeroyi DSS-3]
MFSALFISRPKLAFVISLVLTILGGIGYLVLPVAQFPDITPPVVSVSANYTGANAETVENAVAAPIEAQV
NGVDDMLYMTSTSADNGSYSLSVTFEVGTDPDIASVNVQNRVAQALSSLPSEVTNSGVVTQKSSTNMLMV
VTLTSPNDTYDSVFLSNYASINLKDALARVQGVGKADVLTDLQYAMRMWMDPDKMAALSITPGDLIAAVR
EQNLEVSAGQIGAPPAPEGQTFQYTIKSKGRLSTVEEFENIVIRTGAAGAVVRVRDIARVELGAQFYSAS
GYYQGKPATVLGIYQAPGANALAVSERVTAELERLSRAFPEDVDYEIPFNTTDFVEQSLNDVVTTLMLTF
VLVVSVVFVFLGNWRATLVPAVAIPVSLIGTFAFLLAFGMSLNTISLFALVLAIGIVVDDAIVVVENVER
IIAEEGLSPPEATRKAMGQITGPVIATTLVLLAVFVPVTFMPGITGRLYSQFAVTISVAVAISSINALTL
SPALCGLVLRARSGPPKGVLALFERGIGGVRDGYVALVRKLLILPVISLAIVAAIGAGAGGIFSNTSKGF
LPLEDNGYLFVDVQLPDAATLGRTETVTQRLNDKLQQLDGVANTVLVNGFSMLNGLSPNGAMIIVNLTNW
DQRQDPELSADALLKRILNIAWGESAASIVAFNPPPIQGLGMSAGIEMEVQQTGGGSAQDLAAAVGSLVY
AANQRPEIGQSYTTFRANVPQLFVDLDREKAKTLQVSVAEVFQTMQAHLGSYYINDFNLFGRVYRVMIQA
EGSYRDKVEDIGNLYVRSQQGQMVPLGTLIDVENVLGPVLLKRHNLFRSATVTAVPAPGLSTGDAIQVMT
EESANALPPGYAFEWTGSAQQQLSSGGLVAVILGLAVLFAYLFLVGQYESWSMPVSILLSVIVALFGAVA
AVAVVGSDINLYTQIGMIMLVGMASKNGILIVEFAMEQRAKGLSIREAAAEAAHQRFRAVMMTALSFLLG
VVPLLTANGAGAASQKAIGVAVFGGMLAATVIGVVLVPVLYAVMQGARERIKGSSDAPAPAE
>gi|56696282|ref|YP_166639.1| RND family efflux transporter MFP subunit [Ruegeria pomeroyi DSS-3]
MLEKITRYLHCRREIVPTRPRTAPVPTAYRIRRKRFSMQTGPLSFSKRLHWIPAMALAFGLNTVQLDAQQ
AAPKVSVAAAYSKEITEEAVFIGRGEAIDKVDIVARVSGFLDEQLVEDGSTVAEGDLLFRIEPDLYQAVL
EARRADLDKAEANLELAGVELARKEELLRREATPASEVDIARANELVAEAAVKSAKAAIRQAELDLSYTE
IDAPFAGRLGRVATSVGDVVGPANPPLVTLVRETPIHVTFALNEKRLVDVLQQLGETAETLAESQRSPEV
HVTLPNGTPLGETGRLVFVDNRIDPLTGSVVMRAEFANTGRLIVDGAFVHVRISALKPTLRVLVPQAALQ
RDQRGDFVLVVNDKQMVEQRYVTLGDTVGTAAIVLEGLREGESVIVEGLQRVRPGVAVDAVVAAEQPGE
>gi|56696283|ref|YP_166640.1| AraC family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MGQNAAGRHFVFVLDEGFTMQAFSSAVEVVRLLERVRPGTGYRYNALSLSGGPVAASNGFRLIPDLAAEA
VPPRAVIVVVAGVRAGHSAEPALAARLRGWARRGHPVWGISSGVVRLAQAGLLEGRRVAAHWEDVAYLRD
SHPRVQVTASLFVSDGEVMTCAGGGAASDMMLTVLRRDLGGEIADEIAARLVIDAVRGGGTRQRRALDMR
FETRNRVAFAALRLMRANLVPPLPIAAIARAQGVSERQLERVFAREFGKTPSALYLDVRFQDARAEVRDS
RRSLTEIALDHGYSPAGFARGYKRLFGLLPSEDRRQAMSDEIT
>gi|56696284|ref|YP_166641.1| hypothetical protein SPO1400 [Ruegeria pomeroyi DSS-3]
MTAPLIMVAPNGARRGKADHARLPITLDEMLAEASACRAAGADALHLHVRNADGTHSLDAGRYREALDEL
ARAVPDMAVQITTEAAGVYSPAEQYACLDALRPPWASVSLREIARDPDLAPRLYALAADQGIRLQHIAYD
RADLELLARSRAAGIIRAEQDEVICVLGAYAPPRAGRPEDLDALAPALVGLRLGLCAFGAQEQDCLLDGA
RAGAEILRVGFENNLLSPDGTPWPDNAAAVASLGHHLERKAA
>gi|56696285|ref|YP_166642.1| hypothetical protein SPO1401 [Ruegeria pomeroyi DSS-3]
MSHVFPRHCHAQLPIAVGGEGCYLIDSTGKRYFDASGGAAVSCLGHSNDRVKQAIKDQVDRLAFAHTGFF
TSDPAEELADLLIANAPEGIERVYFVSGGSEAVEAAIKLARQYYLEVGQPERRHLIARRQSYHGNTLGAL
AAGGNAWRRAQFDPLLIGVSHIAPCYEYAERAAGESLVDYGRRAADELEAEILRLGPDTVMGFIAEPVVG
ATLGAVAAVEGYFSRIREICDTYGVLLILDEVMCGMGRTGHLFACTGEGVRPDIVTIAKGLGAGYQPVGA
MLCSGAIYDAVASGSGFFQHGHTYIGHPVATAAGLAVVQEMLEHDLPARVQALGGAMEAALRSRLDQHPH
VGDIRGRGLFWGVELVADRAGKTPFDPGLGLAGKLKRAAFARGLICYPMPGTRDGRNGDHVLLAPPFIME
EADATLIAERLTAAMGDVLP
>gi|56696286|ref|YP_166643.1| hypothetical protein SPO1402 [Ruegeria pomeroyi DSS-3]
MAFVANCARLAQSCGEYVMIRTVSGLVALGLLAACNNPIRPLPANLADQKPACASGDYSVCSEIGHAVRD
QEGGVNTYPIAQTPTTYVISQPIID
>gi|56696287|ref|YP_166644.1| methionyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
MARILITSAIPYINGIKHLGNLVGSQLPADLYARYQRGRGNEVMFLCATDEHGTPAELAAAKAGKPVAEY
CAEMHGVQADIARRFGLSFDHFGRSSSAQNHKLTQHFAGKLAENDLIREVSERQVYSNADGRFLPDRYIE
GTCPNCGYDKARGDQCENCTKQLDPTDLIEPRSAISGSTDLEVRETKHLYLRQSALKDQLDAWIDSKADW
PVLTTSIAKKWLHDGDGLQDRGITRDLDWGIPVKKGEQDWPGMEGKVFYVWFDAPIEYIACAGEWAEAHG
KSDAEWERWWRTDKGADDVRYVQFMGKDNVPFHTLSFPATLIGSGEPWKMVDHLKSFNYLNYDGGQFSTS
QGRGVFMDQALEILPADYWRWWLLSHAPENSDSEFTWENFQASVNKDLADVLGNFVSRITKFCRSKFGEE
VPEGGAYGPQEEALIAELTTRLRAYEGHMEAMEVRKSAQELRAIWAAGNEYLQSAAPWTLFKTDPVQAAA
QVRLGLNLIRLYAVLSAPFIPAASARMLEAMQTSDDNWPVDIATALNALAPGHAFTVPEVLFAKISDEDR
EGWQQRFAGVRS
>gi|56696288|ref|YP_166645.1| hypothetical protein SPO1404 [Ruegeria pomeroyi DSS-3]
MRTVISFAALFLSVILLQLSTGGVGPLDAISGLVLNFSKAQIGMLGSAHFFGFFIGCWWAPRLMGSVGHS
RAFAACTALGAMGLIGHTLTENPYAWAVMRIASGICVAGCYTVIEAWLNAKLTNEIRGRAMGTYRIADSG
ASLCAQLIIAVLPPASYVSYNLLAVLCCAALLPLTLSKASQPETPDAPRLRPGLAWFCSPLAVAGVIVSA
VSSASFRMVGPLYGQEVGLAVNQIAFFLAAFVLGGVAAQYPIGWLADKYDRRWVLIWISVAAMASCGVIA
AAGGTGTLGVMLAAGLFGFTSFPIFSISAAHANDFATSEQRVELSAALMFWYALGAIAAPYLASNLIEGF
GPPALFALIALAHLLLIGFGLTRMRARPTPEARTNYVFAPRTSFTIGRLQKRSREGRE
>gi|56696289|ref|YP_166646.1| tyrosinase domain-containing protein [Ruegeria pomeroyi DSS-3]
MAGTRKDIAKLNGPWSDEMLWYARAVRALQGRAPADRTSWWYLAAIHGIDIPGWVQQGIVPSAGTLPPQG
EQDLIFNQCQHAGWFFLPWHRGYLAAFEAILDAWISAQPGGPQDWALPYWNYLSDSNPNGRAIPPEFLDP
TLPDGSANPLSQVRRNGMHVLGPQPWFPGDISLSAQTRSLPFTAAPGTEGYGGAISGFAQQGSLTGAVEG
DPHNRVHVMVGGVQPVPGWMSDPDFAALDPIFWVHHCNIDRFWAAWMSDPANQQEDSGAWSNGPFPRQFL
MPNPAGGGNVFLPGETLPGGALAPAYDDLHDGTGIPQVVAGGPVTEGVMITSKQAGGSALLGSNSAPLTV
AAGPAATEIAIPATAATEFAAPPGLGPEPRLYLNLEGVRGAAAAGVLQVHLRLPGADGGLRLVDTVALFG
LGKASSTEGVHAGNGLSLAIDITELAREVQSAAPGALERLSVELSQPGAPETEITVERVSLYRQDMG
>gi|56696290|ref|YP_166647.1| hypothetical protein SPO1406 [Ruegeria pomeroyi DSS-3]
MIPARPRAARGLHVARRLRAAGAHLRLGPMPWLLALAATALGVSRLLPAGDGLAALCGRLSLVQLADPAA
RALVLPAPGLLVGGWVLMVLAMMPPLVSAPLAHLWQTTPRSGRAVAVALYGLAYLGVWILAGLALVPLAL
LLASGSAALPLLLGAALIWSASPPAQAARNRCHRMRWLPAGRARAARAALGHGLAHGGACLAACWPWMLV
PLTVQTGHGVAMVLVAAYLLAERGMQAAPALWRVPPGIVAFNGLLPPGMRRITGLRRFGPGLMSDGFAEI
PPQPRTRP
>gi|56696291|ref|YP_166648.1| hypothetical protein SPO1407 [Ruegeria pomeroyi DSS-3]
MTAPSEPEIPQETPQLKLLRRMVMALTAVMIGGVLVTFALIVIRLSDRTPTLPDQVELPDGARAVAVTIG
SNWFAVVTEDERILIFDKTTGKLRQTVTTD
>gi|56696292|ref|YP_166649.1| ribosomal large subunit pseudouridine synthase D [Ruegeria pomeroyi DSS-3]
MQSTRLEFVIAAAPPPRLDKALSRDVPETAALSRTRLARLITEGAVSVDGQVVTDPKARVVEGAQVAIAL
TEAEESHIAPEAIPLVVVYEDDDLIVIDKPAGMVVHPAPGTPSGTLVNALLAHCGDNLSGVGGVKRPGIV
HRIDKDTSGLLVVAKSDAAHHGLAAQFAAHSAERHYTALCYGVPDGSDPRLRGVKGASFEPGNILRLTTQ
LTRHPTDRQRQAVVFHGGRHAVTRARVVESFGQPAAVSLIDCWLETGRTHQIRVHMAHAGHGLLGDPVYG
GRRKLSPRALSPEAVDAIGAFPRQALHAAVLGFEHPLSGEKLSFSAPLPDDLERLLEVLRRT
>gi|56696293|ref|YP_166650.1| RNA polymerase factor sigma-32 [Ruegeria pomeroyi DSS-3]
MANYTTLPAPTPEGGLNRYMQEIRKFPLLEPEEEYMLAKRWVEEQDAESAHKMVTSHLRLAAKIAMGYRG
YGLPQAEVISEANVGLMQAVKRFDPEKGFRLATYAMWWIRAAIQEYILRSWSLVKLGTTSAQKKLFFNLR
KAKAKIGALEEGDLRPENVARIAHDLGVSEDDVISMNRRMSGGDASLNATVGSEGEGTMQWQDWLEDEDA
DQAADYEARDELEARRELLASALDVLNEREKDVLTQRRLLDQTVTLEDLSAQYNVSRERIRQIEVRAFEK
LQKRMRELAREKGMLIPA
>gi|56696294|ref|YP_166651.1| renal dipeptidase family protein [Ruegeria pomeroyi DSS-3]
MRRVVKWAVRLLALAVVAGAVVFFGFLPAYVEDTSNNVIDHAPYPVSERAAALHKELIVGDWHADPLLWS
RDLSQRGKRGQVDVPRLIEGNVALQVFTAVTKSPAGQNYDSNSAEAFDNITLLAVGQLWPLRTWTSLRER
AIWQAEKLHRVEAQADGRLKIIKTAADLEDVLAAKARGEAIVGGILGIEGAHPLEGELANLDPIFDAGHR
VYGLQHFFDNELGGSLHGEADTGLTEFGRAVVAELARRPVIIDLAHSSQQVARDVLAMTDMPLVVSHGGL
HGHCPVKRNFPDDLMREIAATGGVIAMGYWAEVACDDITPTGIARMIVKAIETVGADHVSLGSDFDGSVE
TAFDTSELAALTSALLDAGVAEDQIRKVMGENMVRVLRARLR
>gi|56696295|ref|YP_166652.1| hypothetical protein SPO1411 [Ruegeria pomeroyi DSS-3]
MAGGWARDGAVSEQIEASISDELARLKARKAPVGESLTHCAECEEDIPEPRRQAIPGVKLCLDCQQERDS
AFKTRGGINRRGSKDSQLK
>gi|56696296|ref|YP_166653.1| DNA modification methyltransferase domain-containing protein [Ruegeria pomeroyi DSS-3]
MSFGHPQGKTRAVIERIETIDHQTYFEPFVGMGGVFSHRTWRPRLEVVNDLNGEHVFLLC
>gi|56696297|ref|YP_166654.1| oligoendopeptidase F [Ruegeria pomeroyi DSS-3]
MFHLPFPLRDANAGSGSKELGNLPEWDLSDLYSGEDAPELAHDLDWLETECAAFAADYEGKLAELDAAAL
LTCVQRNEKISAIAGRIMSFAGLRYYQLTIDAGRAKFMSDCQEKITNFTTPLVFFTLELNRIEDDALTAR
FAENADLARYAPVFRRIRAMKPYQLSDELEKFLHDLGVVGDAWERLFDETIAGLTFDIDGEELNIEGTLN
LLTEQDRSKREAAAHELARVFGENIKTFARVHNTAAKEKEVIDRWRKMPSAQTGRHLSNDVEPEVVEALR
EAVVAAYPKLSHRYYELKRKWLGLDRMQVWDRNAPLPMEDTRTIPWAQAERMVMEAYEAFDPRMGEIAAP
FFSKGWIDAAVKPGKAPGAFAHPTVTEVHPYVMLNYLGKPRDVMTLAHELGHGVHQVLAAGQGEMLSSTP
LTLAETASVFGEMLTFRKMLEKAETQEQRKVLLAGKVEDMINTVVRQIAFYDFECKLHAARRQGELTPEN
IGDLWMSVQGESLGPAFDFMEGYESFWAYIPHFVHSPFYVYAYAFGDGLVNALYSVYAEGAEGFEEKYFD
MLKAGGSKHHKELLAPFGLDASDPKFWDKGLSMISDMIDELEAMEG
>gi|56696298|ref|YP_166655.1| alpha/beta fold family hydrolase [Ruegeria pomeroyi DSS-3]
MTLTPAPLFEDVAGGPAGGAAHWMQTSDGLRIRAGHWRPEGEVRGTVLMFPGRTEYVEKYGNAAQAFVTR
GFAMLAVDWRGQGLADRLLEDRRLGHVLEFTDYQRDVAAVVELATTLDLPRPWFVVGHSMGGAIGLRAVM
EGLPVAACAFTGPMWGIFFTPVMKPLSWITANLAPAIGMGHKHPATTTLEPYVQAQEFEGNSLTRDPAMY
EMMRSQLAAHPELALGAPTNIWLREALAECRALSDRPSPDLPCLTFLGSHEQIVDRKAVRARMARWPRGE
LVEIPDGEHEVLMEAPEVRDPAYDRMAALFSAPDQLQRSA
>gi|56696299|ref|YP_166656.1| sterol carrier family protein [Ruegeria pomeroyi DSS-3]
MSDTLEQAAAELNEKLAGAGFDASAKFAIADMGAIVLDGSGARISDEETDVTLSADAETFQQILSGEMNP
TGAFMSGKLTIDGDMGVAMKLASVLA
>gi|56696300|ref|YP_166657.1| TPR domain-containing protein [Ruegeria pomeroyi DSS-3]
MIALTAKLKDIVAALWLISAISGGVSAQEVEPSDETVLLEELAGADPMRARQIDRELQALWAQSGSASAD
FLLKRGRDALEVQDIRAAIEHLTALTDHAPDFAEGWHARASAYFAADLYGPAVADLERALALNPNLYDAI
FGLGLIFEALERPQTAYAVYTRALAIHPHHEEVTSALNRLKPRIEGQAL
>gi|56696301|ref|YP_166658.1| helicase, putative [Ruegeria pomeroyi DSS-3]
MSGSSRIVAVLGPTNTGKTHYAIERMLGHRTGVIGLPLRLLAREVYDKIVALRGPSVVALVTGEERIVPP
RTQYWVCTVEAMPEGLGADCVAVDEIQLCADPERGHVFTDRLLRARGLHETLLLGSDTMRGPIAALVPEA
QFVRRERMSQLVYTGSKKITRMPPRSAIVGFSVENVYAIAELIRRQKGGAAVVMGALSPRTRNAQVDLYQ
NGEVDYLVATDAIGMGLNLDIDHVAFSALSKFDGRRMRPLAPNELAQIAGRAGRGMASGTFGVTGEARPL
DEGMAQAIMEHRFTPLKKLNWRNSALRFNSVDALISALEEAPSGEHLLKAREADDLRTLKSLAGEAEVLA
RASDGASVRLLWDVCRIPDFRGISHAEHAGLLQVIFGHLHERGAIPDDFMARQIRRIDRTQGDIDTLSKR
LAYIRTWTYVAQRNGWVRDESHWRGETRAVEDRVSDALHERLTQRFVDRRTSVLLRRLKQKEALLAEVND
KGEVTVEGEFVGRLEGFRFMPDKSAQGAEAKALKSASLQALAPQFHLRADRFYNAPDTEIDFTEQGGLMW
GEYAVGKLTVGADPLKPQVEVFVDEAAGPDVEQKVQRRLQHFIDRKVAALFEPLLALSRDEALSGLARGF
AFRMVENFGILPRADVAQEVKDLDQEARGALRKHGIRFGQFTIFMPLLLKPAPTRLRLVLWSLTKGLSEF
PEAPPPGLVTVPSVKDAEPGVDTMCGYRISGERAIRIDMLERLADMLRAKDSRSGFEATADMLSITGMTL
EQFADLMQGLGYKAERGERAKVKPAPVEAAAEGEPAPEEGAATEAAPAAEVAEAEPAPAETAEAAAEAPA
ETAETTEAAADATEADPEIEVFFTFTWARPARQQQGRGPRREGGRGQPGQGEGRAKDRPRGGKPQEGGRR
RDGKPQGGKGGKPGQQGAKTYSSRPPKKEKAIDPDNPFAAALMGLKEGN
>gi|56696302|ref|YP_166659.1| S4 domain-containing protein [Ruegeria pomeroyi DSS-3]
MTEAPTRLRIDKWLWHARFFKTRGLAAEVAGSGRIRVNGNRVSKPAHAVGPGDVLTFGQGRQVRVIRVEA
LGTRRGPATEAQTLYTDLDAGRNDALPDET
>gi|56696303|ref|YP_166660.1| iron-sulfur cluster-binding protein [Ruegeria pomeroyi DSS-3]
MTYVVTENCIACKYTDCVEVCPVDCFYEGENALVIHPDECIDCGVCEPECPADAIRPDTEPGMEQWVEFN
RKYSEMWPVIVTKKDPLPEAEERDGESGKMEKYFSEAPGEGG
>gi|56696304|ref|YP_166661.1| CarD family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MTKSKKLEFRPNDYVVYPAHGVGQILSIEEQEVAGFKLELFVISFEKDKMTLRVPTNKATESGLRSLSSP
DVISQAMKTLKGKAKVKRAMWSRRAQEYEQKINSGDLISIAEVVRDLHRTDDQREQSYSERQLYEAALER
LTREVAAVSGADEMAAAKQVDEVLTSRAA
>gi|56696305|ref|YP_166662.1| cation channel family protein [Ruegeria pomeroyi DSS-3]
MHTVKAAVRKLYVGRDPGSVRFRYGLIVFDLSTILFFIATAHLPHGPVLTALSVVIGFVILCDFSARLWI
AKRRREFLTRIYTIADIIVILSLLLDPFLTQSLAFLRILRGLRLIHSYHLLHDLRRDSQFFRTHEDAIVA
AVNLLVFIFLTTMAVLVFFIPPGSRETPYIDALYFTMATLTTTGFGDITLGTPAGKLFSVFVMVVGVALF
VRLAQAIFSPQKVRYRCPDCGLFRHDPDAVHCKHCGGLLNIETGGAG
>gi|56696306|ref|YP_166663.1| cobalamin 5'-phosphate synthase [Ruegeria pomeroyi DSS-3]
MRKNDIADISPRDPMLALVLLTRLPLPALPEAAFARQAAAVWAFPLAGLAVGALAWATGALALAAGLAPV
AVAGLMLVVLVMTTGGMHEDGLADTADGLWGGFTPERRLEIMKDSHIGTYGVLALILSQGLRLAALSALV
AGGALGAAVAAAVWSRALMPVLMAALPNARGTGLSQSVGRPTPQAVTLGLGLAAVLALLLAGWAVLIPAL
LAVLSVLGLAALARAKIGGQTGDILGAAQQLAEITCLLALSAAL
>gi|56696307|ref|YP_166664.1| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [Ruegeria pomeroyi DSS-3]
MLPALTDLAQFRDLLGAAPGPDAAARAGAEERNGQLTKPPGALGRLEDLAIWYAGWRGDARPRIEAPQVI
VFAGNHGVTAQGVSAFPAEVTVQMVMNFEHGGAAINQLARAAGARMDVHALELDRPTQDFTQAPAMTGDE
LLAALQCGWAAVDPAADLLVVGEMGIGNTTPAAAIAHALFGGAAGDWTGRGTGVDDAGLANKTRVVAEGV
ALHTSRDGLEVLRCLGGREIAAMAGAIAAARQLRIPVILDGFICTAAAAALAAVAANALDHTVAGHQSAE
GAHAVLLAKLGKAPLLSLGLRLGEGSGGALAINILKSAVACHSGMATFAEAGVSDG
>gi|56696308|ref|YP_166665.1| glutathione-regulated potassium-efflux system protein [Ruegeria pomeroyi DSS-3]
MESFLYQATIYLAAAVIAVPLAARLGLGSVLGYLAAGLIIGPVLGLVGAETADLQHVAEFGVVMMLFLIG
LELEPRALWDMRDKLLGLGGLQVGVSTLAIMVVAMVAGQPWSVALAVGLTLSLSSTAIVLQTLSEKGLMQ
TNGGRATFSVLLTQDIAVIPILAFLPLLASAPVAHFAGDGSINRVHKAGAGHEASLSLVEGLPGWAVTLV
TIAAVAFVVLAGIYLTRPLFRFIHASRLREMYTALALMIVVGISFLMTLVGLSPALGAFLAGVVLANSEF
RHEMESDLEPFKGLLLGLFFITVGAGIDVGFFLADPLDLIGLALLVILFKGVILYIVGRAFQLKGRDRWL
FTLGLAQAGEFGFVLLAFSTQQNVIPAHLSQKLLMIIALTMMITPLLFILYELLSRRMRDHVADMVPDTI
DEQGPVIIAGIGRFGQIVNRLVTASGFKTIVLDHDMETIQLMRRFGVKGFLGDPTRPELLKAAGLAKAQV
LVAALDDDNQVTKLVAYARRQRPDLHIIARARDRNHVYELYRAGANDIVREMFDSSVRAGRYVLENVGLS
EYEAAQAAQTFYHHDRQAVRDLAEVWDPNIPTADNKAYVERSQALQKDLETALMELSEELASRRSA
>gi|56696309|ref|YP_166666.1| AsnC family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MLDSMDLRLLDALQKDAHLTAQQLGEMLHLSSSQAGRRRQRLESEGYITGYAAKLDPLKLGLHVQGFIQV
HLGTHGPDQSAKFARMVNSRPEITSAWTMTGEADYLLHVYCADLPALNRLLHEVILPHPAVARVQSQIVM
DQLKRDAPLPT
>gi|56696310|ref|YP_166667.1| 4-hydroxyphenylpyruvate dioxygenase [Ruegeria pomeroyi DSS-3]
MGPFPHNAPKSEITPENPAGTDGFEFVEFAHPEPQVLRDLFARMGFDMVARHKDKPGIELWQQGDVTYIL
NAEKGSFAEKFIELHGPCAPSMGWRVVDAQAAFDHAVKMGAEPYEGDDKTMDVPAIKGIGGSLLYFVDQY
YDTSPYNTEFEWLKQSKPRGDGFFYLDHLTHNVYKGNMDKWFKFYGDLFNFREIRFFDIQGKFTGLFSRA
LTSPCGRIRIPINEDRGETGQIVAYLKKYNGEGIQHIAVGTDDIYDSVDAIAAKGLKFMPGPNEAYYDMS
YDRVSGHDEPKDRMMEHGILIDGEGVVDGGETRILLQIFSKTVIGPIFFEFIQRKGDDGFGEGNFKALFE
SIEREQIESGEIEAAE
>gi|56696311|ref|YP_166668.1| hypothetical protein SPO1427 [Ruegeria pomeroyi DSS-3]
MKPAFALSLSFEGITLLHRAAGGWRQVGAVALDAPDLAAALRKLRQDALRLEPDIRCKLILPNEQIRYLT
VETGPFKGEARHALIEKEVGTATPYALEELAYDTSPDGELTHVAAVARETLNEAEAFATEHGFNPVSFVA
APGDNPFLGEPFFGPSSTTAESTGAEAVEPDGIAVVVIGPAVFPDTEPPAAPAAPPVSFSSRRTKATGEM
SEDDPAPAPPPVAPAVTEEPDVPAPVAEAPEAPEPEAAVQAAVASEFASRRTLAPDAPRPILDEMPVTAF
AAAERPQQVPRTEADRLTIFGARSGGIGGKPRYLGVMLTVGLLLFLAAVAAFASLFSPGGLTGLFRDPDP
LAEPPAAAVEAPAPTPETAPEQVAPPTPASIDEDPEDLVAPQDVPELPGLSGTDSAVLEALRTDPQQVED
LDYEPEPSGTQATELALSEAPEPPEVPGLIGLNDLFVASIDRTDLFQDAVALPPVAGFDTDAAPDGSAPS
STPGQSFDLDTRGLVEASPEGTLNPDGVLVYAGRPVKVPPAPPVRFEAPPEVDVAQERLASVRPKLRPGD
LVEQSERSQFGGRSLSELAGLRPKARPVSLQEQLAEQQEADPEEAGTVSPLAVASARKPRLRPEKLAAAA
AAAAASSQGNLGSTAGLNRSADADDSGSFTAATVKPKAPSPTSVARQATLDNAINLRDLNLIGVYGTPAN
RRALVRLPSGRYKKVKVGDSIDGGRITAIGDSELRYQKGSRNLTLKIPSG
>gi|56696312|ref|YP_166669.1| hypothetical protein SPO1428 [Ruegeria pomeroyi DSS-3]
MNRRFGFRRLRCLGDRRRHVRFFRYRWRDRRRRGRGVVLGHLPGRLGPAAGEADRWCGGGGGRLGVGEHR
RADHHHGDSVRFDRLGAGAFGGGAAWPEKGFSQERVVAGRGHEADRVEPVFGGKGLGLVQGFARNRGHMG
QLAIGRGVIGQFLQRIGGGGADLLFDQGVASLALERSGLDGQIADLFVGQDQLAADIGFQPQRVLAQLAQ
RRRQIGRIQRHRPHLPPATGGTMQERDPLEGKRQRKGGFHVTRLTVPEWLGAPAGAHHDGTLKQRIAEGK
KNTGFPLAARHAATPSLRVRIAGEHK
>gi|56696313|ref|YP_166670.1| outer membrane protein, 28Kda [Ruegeria pomeroyi DSS-3]
MRILIFLVAALLFAAVGLARADEQPGHITVTGSGTIETVPDMAVITLGVTHESQEARAALLATSEAVQQI
FDRLGEMGVDVRDMQTNDLSLSPLWSNRASSSEPPKITGFQASNRVTVRVRDLAALGGILDAVVSDGANT
FNGLEFGVKEPKPLRDLARAKAVADAQDRARQLAEAAGVKLGRVVSISELPHDPQPRPMMRMAAMAESMD
VPVAGGEIGLSGSVTMVFEIRQ
>gi|56696314|ref|YP_166671.1| antibiotic efflux protein [Ruegeria pomeroyi DSS-3]
MAAPLVIRNRNFRLLFTAGALTNLGDGVLVLAVPWLAALMTRDAVAIAAVAAAARLPWLLFALPAGVIID
RSDRRKLIARADLMRAGIVLAILLLALGDPAPGAIWALAGLAFLLGSAEVLRDNAAQTILPALVDPDDLE
AANGQLWSTEQLTGQFIGPPLAGVLISAGIAVPFGLDVAVLVLAAGLVWLISLPPQVPSRARFAQALAEG
IAFMRGDALLLRLAVVLGLANFIAMATITVQVLFAQEVLGLGAAHYGMVLSAGAVGAICGSLLAPRAMRL
IGTQACLFLSIAVWGAGYASIGLSNSGWVMGLALTAIMAAAMLWNVITVSWRQRRIPPAMLGRVNSIYRF
FGWGSMPLGALAGGALVVLAEQQMSREMALRAPFLLAGLCCLALLIYALARLRLE
>gi|56696315|ref|YP_166672.1| O-acetylhomoserine aminocarboxypropyltransferase [Ruegeria pomeroyi DSS-3]
MSDTPNYGFDTLQIHAGARPDPATGARQTPIYQTTAYVFRDADHAAALFNLQEVGYIYSRLTNPTVAVLQ
ERIATLEGGVGAVCCSSGHAAQIMALFPLMGPGCNVVASTRLYGGTVTQFSQTIKRFGWSAKFVDFDDLD
ALREAIDDNTRAVFGESIANPGGYVTDIRAVADVADAAGVPLIIDNTSATPYLCRPFEQGASLVVHSTTK
YLTGNGTVTGGCVVDSGRFDWSASDKFPSLSAPEPAYHGLKFHETFGPLAYTFHGIAIGLRDLGMTMNPQ
AAHYTLMGIETLSLRMQRHVENAKQVAAWLEADPRVDYVTYAGLPSSPYAERAERCYPKGAGGLFTFAVK
GGYEACVKLVNALEIFSHVANLGDARSLIIHSASTTHRQLTPEQQEAAGAGPNVVRVSIGIEDADDLIAD
LDQALTKATA
>gi|56696316|ref|YP_166673.1| rhodanese domain-containing protein [Ruegeria pomeroyi DSS-3]
MAQKITKGIKTLLAEANAQVATLPVAEAKALYDDPDHVFVDLRDIREVQRSGMIPGAFSCPRGMLEFWID
PDSPYHKPVFDQDKTYVFYCASAWRSALAAQAAQEMGLTPVMHLEGGFSAWVKQDGPVAEKT
>gi|56696317|ref|YP_166674.1| aldo/keto reductase family oxidoreductase [Ruegeria pomeroyi DSS-3]
MKTRPLGRTGIEVSALCLGTMTFGSQTSEADSHAQIDRALAAGITFVDTAEMYPVNPVSKETVGRSEEII
GSWNRANPARRGDYVLATKHSGAGMAHFRDGAPISGQTIAGAVEGSLKRLGTDHIDLYQFHWPNRGSYMF
RQNWRYDPSGQDTGAVLENMADCLEALQREVDRGTIRAFGLSNESAWGTAQWLRLAESGQGPRVASMQNE
YSLLCRLYDTDMAELSVNEDVGLMAFSPLAAGFLTGKYQRGAVPEGSRMSLVPEMGGRKSERVFDAVAAY
LDIAQRHGIDPVHMALAWCQTRPFMMSAIFGATTLAQLDHVLAGADLTLSDEVLDEIARAHKAHPMPY
>gi|56696318|ref|YP_166675.1| AraC family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MIKSAKNILQPEHRALKCALLVLDDCNTLSFAAAVDPMRAANRLADRHAFDWDYVTATDAPARLTCGLMV
PGLPLARLEGCDLLIVVAGFQLARHATPSLLAGLRRIAAGGATLAGIDGGPWLLAEAGLLDGHAATTHWE
DLDNFASRFPAIDVRHDRFAVSGNRLTSGGAMPAIEMMLHIIAARHGAGFAARVAGLFLYEGAPQPGTPQ
RRTGAPHRHNKLTARANALMEAALDEPLSLAEIAETLGTSPRTLQQQFRLRLGTTPQDHYLQLRLAEARR
LVTDTDMPLMEVAQATGFTSQSSFARAFRTQNGQSARDLRQARTQPAAS
>gi|56696319|ref|YP_166676.1| hypothetical protein SPO1435 [Ruegeria pomeroyi DSS-3]
MNREVFITCAVTGSGGTQDRSPHVPRSPKQIAESAIAAAKAGAAVVHCHVRDPETGAPSRRLDLYREVTE
RIRDAEVDVVLNLTAGMGGDMIFGDVENPLPLRAQGTDMVGASERVAHVAECLPEICTLDCGTMNFAEAD
YVMTNTPGMLTAMGRMMTELGVKPEIEAFDTGHLWYAKQLVKDGVLEGPALVQLCMGVPWGAPDDLNTFM
AMVNNVPDDWTFSAFALGRNQMAYAAASVLAGGNVRVGLEDNLWLDKGVLAENWQLVERAAGIVSNMGAR
VIGPQEVREKLGLVKRAPVAK
>gi|56696320|ref|YP_166677.1| bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase [Ruegeria pomeroyi DSS-3]
MTTAAIIGGGVIGGGWAARFLLNGWDVRVFDPDPEAERKIGEVLANARRSLPGLSDMPLPPEGKLSFHAD
LGEAVTGAAWIQESVPERLDLKLKVYRSIQEACDPGAILGSSTSGFKPSELQEGALRPGQIVVTHPFNPV
YLLPLIELVTTPENSPEMIERAKEIMRGLGQFPLHVRKEIDAHIADRFLEAVWREALWLVKDGIATTEEI
DEAIRMGFGIRWAQMGLFETYRVAGGEAGMKHFMAQFGPCLSWPWTKLMDVPEFTDELVDLIAGQSDAQS
GHHTIRELERIRDNNLVGMMRALKAQNWGAGAVLNKHDAALKPKALPDLDTADLTQPILTLSRAVPLDWT
DYNGHMTESKYLEAFANSTDRFMEIIGCDADYIAAGGSYFTAETHIRHLDEAHAGARIRVETQMLLGQGK
KLHLFHRMYEGDKLLATGESFLLHVSLETRKPCAPSPEIEAAMARIAEAQAGLSYPEGAGSAIRKPA
>gi|56696321|ref|YP_166678.1| 3-ketoacyl-(acyl-carrier-protein) reductase [Ruegeria pomeroyi DSS-3]
MSARVLITAGAGGIGCAMAEAFDVAGARVWIADVDRAALAACPGHWRQSVVDVADEASVAAWFGEIEEAW
GGLDTLCSNAGIAGPTALVEDMPLEGWRACVSVNLDGAFLCARYAAPMLKRQGAGSIVITSSTAGQYGFP
YRAPYAAAKWGVIGLAKTLAMELGPHGIRCNVICPGSVEGPRMEGVLAREAAAKGMSRDQVYAGYASGTS
MGRFVEAADIANMAVFLGSDAARLVSGQVIAVDGHTVNPDPKV
>gi|56696322|ref|YP_166679.1| hypothetical protein SPO1438 [Ruegeria pomeroyi DSS-3]
MRACGLPQGRLCAILVVRRSSNPQTEEPRMDTIRTAEYARALYAAHGDKAEAEAAQKEQHSKALGNRDEA
QSWQAVRRAIRQMRGANQS
>gi|56696323|ref|YP_166680.1| DNA binding protein, putative [Ruegeria pomeroyi DSS-3]
MDKRDRAAQFRQRLARAMELRQATQSALARAVGVDRSTISQLLTDSGARLPNGHVVGACASALGVSADWL
LGLSDRPESAAELLALSMTMTEAPRALVDERIYDWHREAAGYKIRYVPAALPDMLKTRAVLEWEYAPHLG
RTADQAIGASEDRLAWMRSAQSDYEIAMPLFELESFAHGAGYYRGLDPAVRREQIDHLLALCEQLYPRLR
IYLYDAKRLYSAPMTIFGPLLCVFYAGSHYMAFRDRDRIEIFTRQFDTLVREADLTARHLPTHLQQLREA
VPG
>gi|56696324|ref|YP_166681.1| hypothetical protein SPO1440 [Ruegeria pomeroyi DSS-3]
MDTRQRSVVKAVVWNLLGLVTMTLVGLAATGSAALGGTLALVNTALGFTLYLVYERVWAGIRWGRHV
>gi|56696325|ref|YP_166682.1| fatty acid desaturase family protein [Ruegeria pomeroyi DSS-3]
MSEPRLPERAEWGTFALILACYGAWLAVIFGLAGLSLWLAIAAMGLVAALHSSLTHEALHGHPFRYRWLN
EALMALPLTLCIPYNRFRDLHLAHHLDANLTDPYDDPESNYLDPAIWSRLPGWQRRLYALNNTLAGRMVL
GPLIGTACFLRDEARGALRGDRAILLAWALHLPGMAGVLWVVSLSPMPIWAFALSAYIGLGLLKIRTFLE
HRAHEKSRARTVVIEDRGLLAFLFLNNNYHVVHHMNPGAPWYALPALYRAGKERYLGCNEGYSYRSYGEV
FRRYFWRAKDPVPHPLWPKP
>gi|56696326|ref|YP_166683.1| hypothetical protein SPO1442 [Ruegeria pomeroyi DSS-3]
MSLWIPVTLAAALFQTVRFMLQKSLATVKLSASGATFARFLYSAPLALAGLLIATTAGGYDLPALGARFW
IFVAIGGTAQILATICVVALFKQRNFAVGITFKKTEVIQTAIVGFVILGEGVSFGALGAILLGLVAVLLL
SKTPGGSGAWWRHLTNRASQLGLGSGVLFAFSAVSYRAASLELGDLTPWFRALVTLAAVVSFQLVSMALW
LWWRDRAQLAAVWATRNTGAFVGLTSLGGSFCWFLAFTLQNAAYVKALGQVELIFSLMASTLFFREKITT
REIAGIGLLGLSILALVLAI
>gi|56696327|ref|YP_166684.1| ATP-dependent RNA helicase RhlE [Ruegeria pomeroyi DSS-3]
MTKFSELNLNPKVLKAIEEAGYETPTPIQAGAIPPALEGRDVLGIAQTGTGKTASFTLPMITLLARGRAR
ARMPRSLVLCPTRELAAQVAENFDTYTKHLKLTKALLIGGVSFKEQDALIDRGVDVLIATPGRLLDHFER
GKLLLTGVQIMVVDEADRMLDMGFIPDIERIFSLTPFTRQTLFFSATMAPEIERITNTFLSAPARIEVAR
QATASETIEQGVVLFKGSRRDREASEKRAVLRALIDAEGEKCTNAIIFCNRKTDVDIVAKSLQKYGYDAA
PIHGDLDQSQRTRTLDGFREGKLRLLVASDVAARGLDVPSVSHVFNFDVPGHPEDYVHRIGRTGRAGRDG
KAITLCIPRDEKALDAIEKLIQKDIPRLENPARTEEKPEAKPRREEKPARADKPARSDADKREPVKREAD
KRDPVKREADKRDRKGGERRDRKDDRGARVVGMGDHLPSFIALSFEERRAS
>gi|56696328|ref|YP_166685.1| hypothetical protein SPO1444 [Ruegeria pomeroyi DSS-3]
MPRPAPRVTNSPMNTSPTWGVVATVKAPEHEILRFAAWHLELGAHRLFLYLDDPDPAVFARLKAHPRIRV
FACDDSYWQRRKLSRPVKHQARQTMNARHAYNRADVDWLAHIDVDEFIWSETPIAAVLSGLPDDTLCARM
RPIEALAGGDALYKAFIPGGPARDGIVRRLYPTFGAFVKGGFMSHVAGKVFARTGMEKVDFRIHNIFRNK
EMNPHQVELDMVDLCHRHGADWDHWIAAYRYRIAQGSYRPDLAPNVPREAGGLSMHELLSGIEEEQGEDG
LRAFFDELNACAPEGRARLRAEGMLKHRPLDLDGAMQKQFPK
>gi|56696329|ref|YP_166686.1| short chain dehydrogenase/reductase family oxidoreductase [Ruegeria pomeroyi DSS-3]
MTHTAVITGGNKGIGADLAQALLARDYTVISISRHTPEVTHPRLHSVEADLLDPQAVAGAAAQVAASHQV
THLIHNAGLIWPNLIEEAEPSDITGLAQLHLGSALTLLKAFLPAMKARQFGRVMFNGSRAALGAPTRTAY
GATKAGMIGMARTWALELAPHGITVNVVAPGPILTDNFWGIVEKDSPQQEALAKRIPMGRLGRVDDVTRA
FLFFCDPENSFVTGQTLYVCGGASVGSLQI
>gi|56696330|ref|YP_166687.1| cyclase, putative [Ruegeria pomeroyi DSS-3]
MSTLTDFATRIASGEIRVVDLTHTLDPDFPVIILPPEFGQCARFRMEEISAYDHRGPAWKWHNITMSEHT
GTHFDAPAHWISGRDLPRAAVDEIDPADFIGPVCVIDCSDGAAEDEDFELTVPLIEGWEAVHGRIPAGAW
VLMRTDWSKRRGAAYLNMREDGPHSPGPTPEAIRFLIDQRDIRGFGVETVGTDAGQGSHYTPPYPAHYYL
HGAGRYGLQCLSDLDQLPPTGAVLIAAPLKIKNGTGSPLRVLALVEET
>gi|56696331|ref|YP_166688.1| short chain dehydrogenase/reductase family oxidoreductase [Ruegeria pomeroyi DSS-3]
MFQRRRPDQRSARMTHPLSPPPRKDPQKRSVSPTRPPEVRSRAALHLTAAAAEGRFALQRCADCGKVQYP
PRDACSACLSTDLPWQDMAPGGTLIAETTVQTSPRLYFRERMPWRAGTVQLDDGPTVLAHIHGDVARHAR
VRITARLDQSGQGVLVALPETDTPNMEDDPLMRALSADPKHRRVLITDARSAQASALARALQKAGAAIIF
AGEPESWRPYPQRAELEALGVQILPMDVTDTASVQKLAGEIGGKTDILINTARFLRPGGVLDRGDTGFAR
DELEVNYLGLMRLAQAFGPGMCARAADGVNAAAAWVNLLSVGALSNARPFGAYSASQAGAYSLSQSLRAE
FRPSGLRVMNVFFGPTEEDDWYQPLPPPRVTAYALARSVVDGLQRGLEDVWCGDIAQDLRDRFRRDPKVL
EREMTLGGEGA
>gi|56696332|ref|YP_166689.1| hypothetical protein SPO1448 [Ruegeria pomeroyi DSS-3]
MMARPASYEGVALVAPFSTPYQRYSIDTAHHWIATALRGSLRAAGLKPADLDGFQVASFTLFPDTAVGLT
QHLGLCPRWLDHIPMGGASAGVALRRAARAVQAGDAEIIACVAGDTNHIDSFRQLLSSFSRFAMDASYPY
GYGGPNASFALLTDRYMTEYGATREDFGRICVAQRANALKNPNAVMKKPLTMEQYLDARPIADPIALFDC
VMPCAGAEAFLVMSEDRAQSLNLPYARLAAAIERHNAHADDPIQLRGGWTMDVDVLWDQAGMGPQEMDLV
QTYDDYPVISMMQIEDLGFCAKGDGPAFLRDKGLTVAGDFPHNTSGGQLSGGQAGAAGGFIGMVEAIRQV
TGQADGTQVPGAERALVSGFGMINFDRGLCSSAAVLTSGARA
>gi|56696333|ref|YP_166690.1| AMP-binding protein [Ruegeria pomeroyi DSS-3]
MRRRLRQYPAAAVSAETVYAAIAATAERWPDRPVLDVLPGTAAAYGIAAGAVSYATFLARVDARAEALEQ
AGYGAGMRVAALLENRPVFFELFAALNRIGASIVPINPDLRAAELEYLIGHAQPALIVALPARADELRAA
AMAAGVKAPVIGDEDAPPPPRANAAVTEPREGEAREAALLYTSGTTGNPKGCVLPNAYFLLAGRWYADLG
GVASLTEKGERMITPLPIFHMNAMAYSFMAMVTVGGCLIALDRFHPSSWWADVAEARATCLHYLGVMPSI
LMSLPETPEDRAHQVRFGFGAGIDPKLQAGFEARFGFPLIEAWAMTETGAGAVIAAHTHDRLIGQSCLGR
AEGWVAARVVTDTGQDAAPDEPGELLVRNAGPDPRYGFFSHYDKNPEATAEAWEGGWFHTGDIVRRDGDG
RFFFVDRKKNVIRRSGENIAAVEVESVLMRHPSIRAAGVAAVPDPMRGDEVFACLRVDAPSPDLAQQIAE
WALTQMAYYKVPGYIAFVDRLPMTPTQKIQRKALKEMAEALLSDPATVTLTHLKKRQVA
>gi|56696334|ref|YP_166691.1| aromatic 1,2-dioxygenase, beta subunit [Ruegeria pomeroyi DSS-3]
MTTREDVIDFIYGETRLLDEGRYTEWLDLWLPDAVYWMPLDYKQADPVNATSFLYEDNFMLRLRVERLNG
ERTFSQKPKSRCHHVIQRPFVDVFDPAAGRFQTVTNMHYVETRLDEQQLLALTVTHDLVLVDGAFRIAGK
KVELLNCDAAFGNIQLLP
>gi|56696337|ref|YP_166692.1| aromatic 1,2-dioxygenase, alpha subunit [Ruegeria pomeroyi DSS-3]
MNADDIRAMIQPAQVHRDVYISDAVYRLEMRHLFTNAWIFVGHDSQTPNKGDYITTQVGDQPVIMVRHTD
GEVKVLYNRCPHKGTKIAIDRAGNTGKFFRCPYHAWSFKTDGCLLAIPLKKGYEGTGLSESQNGKGMQAV
GAVYNYRGFVFARLAEDGIGFDEFFGGSLSSIDNMVDRAPEGRVEISGPPLRYMHKCNWKMLVENQTDTC
HPMVAHESSAGTAVKIYEQMGNPEPRPPAMQIIAPFMSPYEFFEDMGIRTWPNGHGHTGVNMSIHSNYDA
IPGYFEAMIESHGEERAKAILDESRHNTVYFPNVMVKAPLTQLRNFIPLGADRTLAESYVYRLVGAPEQL
TAMSAMYNRMINAPTSIVGHDDLEMYERAQEGLHAEGMQWVDIRRLHTGPENFETEAVENGTTERQMRNQ
FHAWAKFMTMSMEDAPGVAAQ
>gi|56696335|ref|YP_166693.1| oxidoreductase [Ruegeria pomeroyi DSS-3]
MLLLRIAQKQAVTKRISAFTLVAAEGGPLPDHGAGAHIEVQTAAGPRAYSLIDWPERQPGAWQIAVQRED
DGDGGSRAMHALNPGDTIEATEPKNDFELRPGDMPVALLAGGIGVTPLISMATELAASGRPFVFHHAGRS
AGDMAYVEQLATIFGDRYSPHFDDTAPLDLGALMAGLSGHALYICGPKGMIEAARAAAEAAGLTDIHVEL
FTNAAHAAGDSAFEVEIASSGQVITVAPDQTIIEALEAAGLDPLYDCQRGDCGICQTEVIAGTPDHRDVV
LSQAERDSGKVMQICVSRARSTRLVLDL
>gi|56696336|ref|YP_166694.1| MarR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MNDTPDDTFVSGYLLYLLAASSEEASAQFHDHIRAQGLRVPEWRVLACLVDNDAMMITRLAKLSLMEQSR
MTRIVDQMDARGLVTRVADAKDKRRVRVRLTDDGRALAESLVASARAHETRLLSALADTDAARIKGVLRT
LLDVLDRPRESR
>gi|56696338|ref|YP_166695.1| TRAP dicarboxylate transporter, DctP subunit [Ruegeria pomeroyi DSS-3]
MNRCPDALAHRFTREEDMKHFARLVAAAIVAASTGAAAWAADTTLRISTWLPPTHGINTEIFAGLIGMME
EATDGQVSGELVFGLAPPPAQMDLIQDGAADMAIIFHGYQPGRFIGTKLIELPGYEGNAEAASVAYWRVH
TQHLGKLGEHRGVKLVALNTHGPGQIHTSKDVASLADLNGLKTRIGGGVAGDVGAALGLVGINVPAPKVY
ETLESGAADAVAMNVGERVGFKLNEVAKNLYDMPGGLYRGSFAIIMSQETFDSLPADVQAALDEKVFGEP
ASRMAGAAWDKSDMIAYEATRGTEGARIVEASAEDQAAFAAIAAEVTTKVLAELDAAGVDAQAAYDMVKA
EMAAN
>gi|56696339|ref|YP_166696.1| TRAP dicarboxylate transporter, DctQ subunit, putative [Ruegeria pomeroyi DSS-3]
MMKRVLSLSVWLPGLLASAALFVLMVMTFADVLLRSIFNAPIEVAADLTRLLMAVMVFSVMPVLSGKNAH
VSVDLLDGPFRRLRLSRWRDAAVCLFCGIILFWPASRVYDLAERSRSYGDVMEYLRLPLHYVGWFIALLT
LVTAVVLVVRGVLLLVAPRLAGGAS
>gi|56696340|ref|YP_166697.1| TRAP transporter, DctM subunit [Ruegeria pomeroyi DSS-3]
MTASLIGFGAVLALILLRVPIAFAMGFVGMVGFMTETSFRASISMVARLIIDTSQDYGLSVVPLFILMGL
FVNKGGISRELYAASNAFLGHLRGGLAMATIVACGGFAAISGSSLATAATMAKVAMPEMRRFGYSDALST
ASIAAGGTLGILIPPSVILVIYGLLTETSIGKLFVAGIVPGMLGILLYLCAVRWTVWRNPAAGPAGERVP
LRGRLAALREVWAVILLFFLVIGGLYGLFDIPPLNINFSPTEAAGMGAMGAFLIALARRRLSLKDTLEVL
LETSITAASLFAVLIGAWIFSNFVNIAGLPAALSEIITAYELRPWQVMAVILAIYIALGCVFESLSMLLL
TVPIFFPLVTGLGYDPIWFGIVVVVVTEISLITPPVGLNVFVLKGVVGDVSTGTIFRGVTPFWMVDIIRL
ALLLAVPALALYLPGQM
>gi|56696341|ref|YP_166698.1| thioesterase family protein [Ruegeria pomeroyi DSS-3]
MDKIFITERELRFGDCDISGTAYFPSYLDILNGVNEEFWASLGFAWHDIIWNERWGTPTVHLSCDFSKPS
FFGETLRFELGVVKVGRSSVTVRHRISCGDEVRWSSTQVLAASDLDKHTSIPWPDAMRAALEARLTSADE
LGF
>gi|56696342|ref|YP_166699.1| MarR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MAESTDQTEQLRELAEIGLEGYAPYLMNRIMGRYNANLRKEMTALGLSTAKMRALAILSAKDGLPIGTLG
IFAVVEQSTLSRALDGLQADGLVRREVDSDDQRSSRVYLTPAGRAVYDRLWPHMRASHDRMFQGITPQER
QAFLATLNKMLANIRVHEI
>gi|56696343|ref|YP_166700.1| indolepyruvate oxidoreductase, IorA subunit, putative [Ruegeria pomeroyi DSS-3]
MAERSFKREVQDLRLGAGETFTGEGILAITKALLESGVGYVGGYQGAPISHLMDVLADAQDLLGELGVRY
EANASEAAAAAMLAASVHYPIRGAVTFKGAVGVNVASDALANLASSGVTGGALVIVGEDYGEGSSIMQER
SHAFAMKSQFWLLDPRPNLPSIVQAVKQGFELSEASNTPVMLMVRIRSCHVTGQFECADNLRPPLSVRDA
LSEPRRDFARVVLPPMSYQHERDKVENRWPAAERFITEQGLNEVFGPETAPVGLVVQGGMYNGVIRALQR
LGLADIEGRSAIPLYVLNVTYPLVKDEFLAFARGKDALLVVEEGQPEFIEQGLAAMLHRARSPVTLQGKG
LFPMAGEYTGQIMLEGIAGFLKDAAPQLLPGQVIAPNAPPPEMPDLSQTVPIRPPGFCTGCPERPIFAAM
KLVEQELGKHQITGDIGCHLFAALPPFEIGGSTMGYGLGPASNAAFDGGGARRAVSFIGDGGFWHNGLSS
SIGNMVFNRSDSVAIVVDNYYSAATGGQDVLSSRAKNPSKATGNPISRALEGVGVKWVRQIDRTYDVGHM
RDTIREALTTDYDGPKLIVASSECMLNRQRREKPLRAQAIREGRRVEAPRFGVDEDICTGDHACIRLSGC
PSLSLKVLDDPLRDDPVASIDQTCVGCGNCGEVADAAVLCPSFYRADLVHNPGRWERLLAGWRSRIITWL
QDRRARRQLDFGEAS
>gi|56696344|ref|YP_166701.1| putative indolepyruvate oxidoreductase subunit B [Ruegeria pomeroyi DSS-3]
MTRMDGVMTPQGADSARAITKLVVMAVGGQGGGVLTGWIEAVARAAGRAVQATSVAGVAQRTGATIYYIE
IAPEGVAAPVFSLAPAAGDVDILIAAEMMEAGRAIQRGFVTPDRTVLIASEHRALAVSEKMVPGNGIAQA
DEVMAAAEIAAARFLSADMERLAVAKGSVISASLFGALAGSGALPFPRDAFETAIRNSGKGVEASLAAFT
AGFEAVSAGPAQPEAAVTAKTPAEPAVQGPSAQLAAWAALTARVEALPADAREMALAGLRKVVAFQDCTY
GGEYLDRLTALARQDEPAQGFELTREAAKHIANAMAYDDVIRVAGRKTRAARRARIDAEMGRSPQQGMQV
TEFLHPRAEEISSLLPAGLGARVAASPRWMARLDRWFGHGRRIRSDRVSGFLQLYLLAGLRGYRRRTLRH
AQEQAHLEAWLHKVGETRERDYDLAMELLRCRRLIKGYSDTHARGLSKFDRVMAGADLVAGRVDAADWVR
RLREAALQDEEGRALDGALKTVRSFSS
>gi|56696345|ref|YP_166702.1| hypothetical protein SPO1461 [Ruegeria pomeroyi DSS-3]
MHARGSGRKPMKLWYQSYVDYENGAEYWDMLGPHLDAVSEVGTQVDIRGITPFDSYAHPLVEFRCAREMI
CNAIRAEREGYDAFIVGHFQDAGLYEARSVVDIPVIGLGEATMLWCCQMGQRLGIVTINPRFIPWFHHQI
GKYGLRERVSGVHAMTFEPGQILGAYGDTDKAAEVKRLFEEQGRPLVAAGTDVLIPGGGIPMLLFSQFHD
HQIDGAPVVNGIPIAVKMAEMAVNLKRLTGQGVSRVGDYTKAPEHIIEEFMTHPKGL
>gi|56696346|ref|YP_166703.1| OmpA family protein [Ruegeria pomeroyi DSS-3]
MFVPFVRGQPVMTVRLLRLAACFVVMPYAGTAQDAQPRSDLMTFAQGVLPVSVETGPEQMRTGSPQAIAA
IDGNAGGFGMTPKPGSAQAQVTIIYALPSLTRFDRLAVPNIGETPSPSQTFFRDIVISGAVEGPDGPYIP
IAGGTLATHADPGLVTELAMEDAVPEVLWLKVLLSGGINVERDKTYFEFSELIGEGTQQPMPMSEGFTGT
WKGRGVSIELLQEGAHVTGCYDKTGTLSGTVDGRVLRALGSDPAGIPSQFILIASADGAMRGLRSTNGAP
FKPYDGEPAAGAVVCARPEPAPPGCGAVLHGIGFNYDSAAIRPESAVLLNALADGLRGTDAARIEIVGHS
SSEGAAEYNRALSQRRAASVVAALVDMGLAADRLAALGKGEDEPIASNADEAGRSLNRRVEVHCR
>gi|56696347|ref|YP_166704.1| TRAP dicarboxylate transporter, DctM subunit [Ruegeria pomeroyi DSS-3]
MEWYEALVFLLGMILFFMALGVPVALAFLAANMIGAAYFMGGRGDIASQMARGIGQLANNAIPTVTSFNL
MPVPMFLLMGEIFFFTGLANRMFGAVDRLMGKLPARLSFVTVAGGTAFATLSGSSMGSTALLGSLMVPEM
QKRGYKKHMAIGPILGTGGLAMLIPPSALAVLLATLAELDIGDLLIAGIMPGLMLAIFYAVMILGMALYD
PSAAPAYEVESSDWVEKLRLLFVDILPMVSIVIGVILVIMFGIATPSESAAFGCLGVIVLAALYRSLTWE
GIVKSVAGALKVTTMALLIIFGSATFSALLAFSGASSGLIRWATGFDLEPITMLLIMFGILLVLGMFMDQ
LSMMLLTVPIFFPLAQTLGFDLIWFGVIVLLALEISFTTPPFGLLLFVMKGVSAPGTSMRDIYVSALPFI
GCSMLLVALLIIFPGIALWLPGLGQ
>gi|56696348|ref|YP_166705.1| TRAP dicarboxylate transporter, DctQ subunit, putative [Ruegeria pomeroyi DSS-3]
MMRLIDRICDLLAILAGIYLVGIMFGIVISALARTLNLSGSWSSHIFTFTEFGLLYIVMAASPWLVRHRG
HVFIELLSAALPRRMQRSYSRAISALCVVICLTLVWYTWGATARAWRFGDAEMRSLDMPKYLLLGAMPIG
FGLMAAQFLRFVFGPVTMHTGEAGVHE
>gi|56696349|ref|YP_166706.1| TRAP dicarboxylate transporter, DctP subunit, putative [Ruegeria pomeroyi DSS-3]
MKIFSGLSRKATYLMAAAALAVMAAPMSAKAEDRVSAVHAFPEFLVYTKTFLAMVADINERGKGIVQIDV
RGGPEAIGMFEQPAAVRDGVVDMVHTPGSFYGANVPEIDAMVASRVTPMEARANGGAALMDKAHQERFNV
RHLGWVDGGIKFHIYMNSEPKFRDDGILDLTGVKLRDNPIYHAFFEQLNATTASMPATEVYSALEKGVVD
AAAWTEIGIPQLKWNEFLKYRVDPTFYNTDIGVIFNLDAWNALSPESQKLIQDVVIEWEGKSYADRQAEV
AADAKTLADGGMSFVSHSAEAGETYRKMADDSAWARMYERIDGGGAGAETYMALRKAYALAE
>gi|56696350|ref|YP_166707.1| opine dehydrogenase, putative [Ruegeria pomeroyi DSS-3]
MEIAVLGGGNGSTAAAVDLTAQGHNIRFWRRNASAQAELKARGNVITLKDFEGARPIRITMVTDDIGEAI
RGAELIVCPTPATAQSDIAAAMAPHLADGQVVFLPPGSFGSWIMADIVRKAGNHADVSWAETGTLPYLTR
LHGADTVAITTRATRLPTGVYPLRNAEHAHSVLARAYPAVEPAGDALSGALMNAGPIIHPPLITMNAGPI
EHFDHWDIHNEGTQPAIRRVTTRLDAERMAVREALGYGAPHFPLADHYETSDWMYGNLAHDKLVDSGDWR
EHLVLTEHRYMREDVAVGLALLVSVADWAGVPAPTATGLLALGSAICDDDFRQSGRTLENLGLADMDRAA
LQTMLRDGA
>gi|56696351|ref|YP_166708.1| 3-hydroxybutyryl-CoA dehydrogenase [Ruegeria pomeroyi DSS-3]
MAARETIAAVGAGRMGRGMAVAFAYSGHPVRLIDAKPRPMDEFDRLKAEIRAELGSTFVLMADVGLMQAS
EADAMLARVEVVGHDDLAAALAGVPFVFEGVPETLEAKREVFERLSRHADADAVIASTTSTILSNDLQGF
VTPPDRFLNAHWLNPAYLVPLVEVSPGDATDPAVTARLLDLLERIGKVPVTCAVSPGYIVPRIQALAMNE
AARLVEEGVASSADIDKATKYGFGFRFAVLGLLEFIDWGGGDILYHASRYMTRATGQNRFAAPDIIETNM
AEGRRGLRDGRGFLDYDGLDVAAYQRERIGAFAAMLRHLDKMPVKGD
>gi|56696352|ref|YP_166709.1| aminotransferase family protein [Ruegeria pomeroyi DSS-3]
MRPTPYLAPIPVRGRISRPQPKGLPVINMGYNELPYPPLPAIRAAMEETAERAQSYGSPHCDALRDALGA
AHGLDPEQIVCGNGSEELLDVIARCFARPGDEILISEFGYIQFALTANRVGATLVKARERDNTSDVDALL
AAVSEHTRLLFLANPNNPTGTMLEIDELSRLARDLPAQVVLVLDLAYGEFAAPDYCAAVHSLAANHENIV
VTRTFSKAYGLAGARVGWCHAPAWMVPVLYAARGMGTVNALAQAGAVAGLADPAAIQERVDEIVSERARL
TGALGQLGLVVTPSRTNFLMARFREGDAARTEALVEHLFEDAGIVVNRTREAGLEAFFRFSLSLPAHNDL
LLDSIRRFIGQG
>gi|56696353|ref|YP_166710.1| 3-ketosteroid dehydrogenase, putative [Ruegeria pomeroyi DSS-3]
MTPDSDPHIAPPPARFDIASQTLIIGAGACGLVAALAAREAGQEVLVVEADALPRGSTALSAGLIPAPGT
TMQRAAGIKDNAALFAQDIQTKAKGQNDPDLVETLAAGAGPLIDWLAERHGLPFSVVTDFDYPGHSRRRM
HGLPGRSGEELIDALRQACEAQGIDIVCSRRAHILHMEEGRVRGVTVFGSDGSGESIACDRLILACNGFG
GNRQLVTDHMPEIREALWFGHDGNRGEAVLWGAALGADLRHLGAYQGHGNVAHPHGILITWAVITSGGVQ
VNRDGLRFWNEAQGYSEAARAVMAQPGGAAFAIFDARIAGIARQFEDFRRAEAAGAIRQADTPEALAHLL
GLPPDALAQTLRDLPRDGTDGFGRLFQPPPLAPPYCGVQVTGALFHTQGGLRTDARARVLRRDGTPVPGL
YAGGGAACGVSGNGDSGYLSGNGLLSAVVLGWIAGSCRVAAS
>gi|56696354|ref|YP_166711.1| isocitrate lyase family protein [Ruegeria pomeroyi DSS-3]
MTLKARLAGEDIVLAPGIYDGLTALIAEQAGFEALYLSGAAVAYTRLGRPDIGLTSVTEMAETMTLIADR
TRLPVIIDADTGFGNALNAQRTMRLYERAGAAALQVEDQTYPKRCGHLKDKALIPAAEMAGKIAAMADAR
RSDRTLIIARTDAIAVEGFDAALERAETYLAAGADVLFVEAPQTETELSGIADRFAARVPLLANMVEGGA
TPIRSAEALQALGFRLVIFPGGIVRALAHTARDYYTSLRAHGTTAPFRDRMYDFAGLNEVIGTTEMLERG
KRYDPGQ
>gi|56696355|ref|YP_166712.1| isochorismatase family protein [Ruegeria pomeroyi DSS-3]
MSDPKTWTLAQTALLTIDLQNDFLHPEGAYGRAGQGAAAIAALPARIAPLVAALRAKGGLYISAQFTLVP
GPRGEPLISPHLKALRPFLTRGDFAPGSFGHQLVDALQPADFTVEKVAYSAFYQTRLEYILRAMGIRQLI
VGGIVTNGGVASTLRDAHLRDIDTVMLSDGCAAFRDEVHDATLLSLGTVTNQMTCAEALGWLEGAP
>gi|56696356|ref|YP_166713.1| hydantoin utilization protein A [Ruegeria pomeroyi DSS-3]
MSGKMIGVDVGGTFTDIFVLDENDGTARVGKVPTSRPDQSTGFLQGITDAVADIGSVGVVVHGTTAGTNA
LLERKGARTGVICTQGLRDVLEMRRRDRPRTWGLRGDFEPVVDRRDRLEVPERTLADGTIRTPVDLDAVR
RAARQLQDQGCVAVAILFANAYANPANEAAAVAALREIWPNEHVSASSEILPEIREYERFSTTALNAYLQ
PEVSGYLGRLGAALDSGGFGGEFMIVQSNGGVMDVDTACRFPIRTALSGPAAGVIAAGFIARSAGYDNVI
TGDMGGTSFDVSLIAEGRSMLAPQTSIDFGMVVRTPMIEITTIGAGGGSIAWVDKGGLLNIGPESAGSDP
GPVAYGLGNDRPTVTDANVVLGRIDPENPIGGKLARLDVEAAARAIDIHVGQPLGLDTLAAAEAILRVAN
SRMAGALRLVSIERGFDPKKFAFMPFGGGGALHAGAMLAEVGIARAIVPRYPGVTSALGCVIADMRQDFV
QTLNAMLDGLDTDMLGTVMQDHHDRGMAMLKAAGTRFEAREATFALDMAYIGQTHTVSVPIPVQVSAGKV
HSPTQAQIAAAFDSVYRDTFGRLLPGGVRRILNLRSAVTGKRPKFDLATLAPTVTDPARPKSSRKVHFGT
DWHETAIYDRLSLPVGTLITGPAILEQPDTTVLIEPGLVGRVDPLGNVIIETGPEAGA
>gi|56696357|ref|YP_166714.1| hydantoin utilization protein B, putative [Ruegeria pomeroyi DSS-3]
MTDIDPITLSVLAGRMEQIADEMDATLFRAAFNPIIAEAHDASHGLYHAETGDTLVQGKSGLPIFVGVMS
FAVKAVIEKVAADGDLADGDIFIFNDAHIGGTHLSDMRLVRPYFREGKLFCWLASVGHWHDVGGAVPGNY
NPAATEVFQEAFVLPPVRLARAGVVNQDIIDILLRNTRLPQSAQGDLNGQLGALDLGVRRMDELLDEYGA
GTVDAALDALGIRAERLMRSELAAIPDGRWEAEDFLDNDGIDDTPLPIRVALEIKGDRMHLDFTGSAPKC
AGPVNIALPTTIATVYVAIKHIFPLLPANAGVMRPIEVTVPEGSILSAEFPAPTGGYTETILRMIDVVFC
AFAQAVPDRVVANAYGTINALSIAGRRSNGKPWVMFSFYGGGHGGSPEGDGLNHGNAPISTATIPPLEIL
EAAYPVMFRQWALRRDSAGAGRHRGGLGAVYEIEVLEENGAEGFLFGERGRFAPKGVAGGEEGALNVFSY
QQGADWPHPPLVSKMRGIRLKQGEAVRLETPGGGGYGPPAERDPAAVALDVARDYLSAAEADRLYGPTWR
EGMR
>gi|56696358|ref|YP_166715.1| tautomerase, putative [Ruegeria pomeroyi DSS-3]
MPVVELHLIKGYGEEDKRRLGHALTDAVRFVLPAPLDGITVMIHEMAPDAYYRGRDTKTPAPALPDPAEV
VRAYLAAMEARDLDAARAMQGDGFTMYFPGTGPMADLSELIDWARPRYSFVTKTYDGFDAMPGAGDTSVV
YCRGTLSGEWLDGTAFSGIRFIDRFELIGGRITRQDVWNDMGEMRGRT
>gi|56696359|ref|YP_166716.1| GntR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MPAGAKSRRVYLSLLEQISAGRLEPSRKLPGEEQLAEDYGVSRVTVRRALDALTENGFLSRRAGSGTRVR
PRPAAPQPVTMDFSTLLPQLVEIGRSTEVRLLSSRMDQAPEHVARALSLGPGEAVQIAQRTRSIGGTAYS
HLTTYVPSRIAAGISDEDLSREPLHVLLERNGVQIADARQSVSATLAGPEVALALGLPEGAALLSLDRVM
RDAGGRGVEFLKGLYRPDMFRLDMSLARVENGEGRHWEPAITPLKDTPR
>gi|56696360|ref|YP_166717.1| isopropylmalate isomerase large subunit [Ruegeria pomeroyi DSS-3]
MLRREDGSALLWVDRHLVHEGSHHAFARLAERGLPVAEPGLTFAVVDHYAPTRRAGPIADPAIARMIETL
RGNAVRHGVRLFDLDDPDQGIVHVVGPEQGLTLPGLLITCGDSHTSTHGAFGALAFGIGATEVAHVLATQ
TIWQRKPRAMRITVDGTLPAGVSAKDIALNWIARLGADGAQGHAVEYAGSAIRSLSMEGRMTLCNLTIEG
GGRMGMVAPDEVSFAYLRDRPHAPRGGDWHKALDNWQALASDADARFDRDVALSTEEIAPIVTWGTSPEQ
ALPIDASVPIPDTLQPAKAQAARAALDYMGLVPGRPLAGTPVDQVFIGSCTNGRIEDLRAAAAVLAGRKA
RVPGLVSPGSARVKAQAEQEGLDRVFTEAGLDWVASGCSMCVGMNGDLVAAGKRCASSTNRNFRGRQGKG
ARTHLMSPAMVAAAAVTGTLCDVRPMLQGRAL
>gi|56696361|ref|YP_166718.1| 3-isopropylmalate dehydratase, small subunit [Ruegeria pomeroyi DSS-3]
MAGWREQRGRAVLLAMANIDTDQLIPARFMSTPRAEGYGRFLLHDVRRMSEGALDPEFPLNAHPDACILV
TGRNFGSGSSREAAVYALVDAGIRVVVAPSFGDIFAGNAVNNGLLPARVSEADADLLAKTLSSGAGNGVA
DLASGLLRIEGVSVPFQLDEVWRTKLLNGWDDIDLTRLHGAEIAAYRTRLRAEPGRFPGGDAT
>gi|56696362|ref|YP_166719.1| RNA polymerase sigma factor RpoE [Ruegeria pomeroyi DSS-3]
MLTQTLDSPSGAKRLRVMSRHEREPVSQSKTDFSQQTRWMLAVRDNRDRLAFAALFDHFAPRLKGFVIRS
GTPAHQAEEIVQDVMLTIWRKAAMFDPHRAQVSAWIYQIARNRQIDIARKENRPMPEELKEEPGTEPDAS
QILGLEQEAGQLKQALANLKPEQREIIEKAYLGELTHQEISAQTGLPLGTIKSRIRLGLERLRYELKDLK
Q
>gi|56696363|ref|YP_166720.1| transcriptional activator, putative [Ruegeria pomeroyi DSS-3]
MSAINHHVPDAMLAAYAAGTLPYAFAVAVASHVSLCAQCRVALEAHQAVGGAVLETADAVAVSSSLKDSI
LARLDDPFTPEPVYERSGIYPGPVIEAMQRRAPKWKKLGMGVRQDILSADAHGSVRLLYIPPGQAVPDHS
HNGLEMTLVLQGSFSDATGHFGVGDIEIADETLEHTPVADQGDACICLAATDARLRFNALMPRLLQPLFR
I
>gi|56696364|ref|YP_166721.1| short chain dehydrogenase/reductase family oxidoreductase [Ruegeria pomeroyi DSS-3]
MTQFSGKTFWLIGASEGLGRALAKRLDGEGARVILSARNGDRLEQLRDELQNALVVPLDVTDTAAVQKAA
ASVGPLDGVIYNAGAYEPMRATDWDSDAALRMSDVNFTGALRVLGEVVPGFVRQGRGDITLVGSLAGYRG
LPAAIGYGASKAALVSLAETMRFDLKGTGITVRLVNPGFIKTRLTAKNSFRMPMLMTPETAAEHVLKAMR
KRRFRTDFPAPFSWAIRCMDYLPDILVYRGR
>gi|56696365|ref|YP_166722.1| hypothetical protein SPO1481 [Ruegeria pomeroyi DSS-3]
MRRLRKALAAGSFLFRGTFVQSDPIPARARRPIMMLEHIQARTHHARRGALRNSFTYGVDYVLTDLGPAG
PLLISRNRFNLWSLWDHRHGGARDNGHGVHWFRSLLQERGLATENAQLLLLTQPSFLWFHFNPVSFWIAL
VDGTPRAFVAEVNSTFGQRHCYFCARDGFAPIRKSDTLIAEKLMHVSPFQRIAGHYAFNFGMTDTQIDIR
ISFENGDHGVLATLSGERRPATSASLAWAAIRRPLGAARVLALIHWQAAILYLKRAPFLKKQHPPEHLVS
DGYDLRGTKE
>gi|56696366|ref|YP_166723.1| hypothetical protein SPO1482 [Ruegeria pomeroyi DSS-3]
MYDQTQGPRKRIAIVGGGISGLSAAYYLAPFHDVTLFEAAPRLGGHARTVLAGKNGDQPVDTGFIVFNYV
TYPYLTRLFRDLDVPVIKSEMSFGASINDGQLEYGLNTLTAILAQKGNLLRPQYFKMIADILRFGKRAEA
AARDDDKTIGELVDELGLGSWFRNNYLMPMCGAIWSTPVAEVDRFPAKSLVQFFRNHALLAGSGEHQWWT
VKGGSIEYVRRLEAALVARGCTLRTNMPVEQVQRDDFGVHIQTGDAQRATFDELILACHSDQTLKILGAN
ATKAEASALGSIRYQANKAVLHCDTGQMPRRRACWSSWSYRSQDGDIGVTYWMNKLQGIPESDPLFVTLN
PSKPIHSEAVYDEVQFHHPVFDKAALKAQQDIRQMQGQNHTWFAGAWNRHGFHEDGIASAMRIVRALTNT
QQLKGMDHAFHEQSPEVEFPVDMRASA
>gi|56696367|ref|YP_166724.1| cyclopropane-fatty-acyl-phospholipid synthase, putative [Ruegeria pomeroyi DSS-3]
MRFTNKALKSNFLSTCERLHEGQLTLRTPEGERYRFGTRGPEAEMVIRDWAAVSAMAAHGQVGLGETYVQ
GMWDTPSIEGLMTLAMNNRDHLGAYDQASPFHKAKFRLVDTVMRANSRRGSRRNIRSHYDVGNEFYGLWL
DDGMTYSSGLFETGDTDLARAQTRKNNRALSRLSQGERVLEIGCGWGGFAEQASQEGWDVTGVTISRNQH
SYAECRLDGRADIQLRDYRDITGTYDNIVSIEMIEAVGARYWPSYFATLKRNLAEGGRVLLQAITVKDSF
FETYKTTSDYIRQYVFPGGMLLSDSVIAKQAGDAGFALCDSFAFGQDYARTCRIWAERLSAQKRRIAEMG
HSESFLRNWQYYLEICAASFAVGHTNVVQVELAHA
>gi|56696368|ref|YP_166725.1| hypothetical protein SPO1484 [Ruegeria pomeroyi DSS-3]
MRSSIALLWVLLTSVGAQANTVGGVLPDAELRGAATFRFVGLPLYEARLYTRSGAPLDWNEDFGLELRYL
RTLTQRDLVEGTLREFARLGSSLPVREQLETCFSDVRKGDRYTAVSKGPNRIAFWLNGRKTCTLAHPQIK
SRFMGIFLGESTRSKSFTHKLKGE
>gi|56696369|ref|YP_166726.1| sodium:galactoside symporter family protein [Ruegeria pomeroyi DSS-3]
MMLYPRVSLYALMLAAAGIPLYIHLPRFASLNLGIGLGTVGAILLLIRLVDLVQDPLIGWAIDRWPRAQT
TFAITAALGLATGFPLLFSLSAGPQVEARVIAILVLLFSSYSLGMILLYARSATLAATPAPRDVMTMAAY
REGGMLAGVVVASIVPTLFVAMGAGAQGYPAFGLFLGALALVCAAISLPIWQRHPVPGHPLSLAGLARSG
AMRLLVLALVNSLPVAITSTLFLFFVEDRLQLPGKAGPLLILFFLSAGLSLPLWTGLSHRAGPKATLLIA
MPLAILGFVGAAFLAPGNLVGFALVCIASGAALGADMVILPAMFSVALNRAGLEPSLAFGIWSFAGKLGL
ALAAFLVLPLLERNGFTPGALNSAQALTSLNISYAVIPCILKLGAIALVLALPSEGRST
>gi|56696370|ref|YP_166727.1| hypothetical protein SPO1486 [Ruegeria pomeroyi DSS-3]
MKLLTILSLLVLLVIFAKAMFLSFRAQSPEDYAGTGPAFVLKTHLSGPILSEGLIYGPTGKMTNSFVARM
VGEWEGDTGTLSEEFTYSNGKRQSRKWFLKQGEGNSFTATADDIIGEARGTVSGSTIKMEYKIVLPEDAG
GHSLSVTDWLYLTENGVIMNKSEMRKFGIKVAELIATMRPDPDAQP
>gi|56696371|ref|YP_166728.1| hypothetical protein SPO1487 [Ruegeria pomeroyi DSS-3]
MTRKRPLLAIAVALATAAFALSPFLTQEFAGFRPEQFPVVIDFWPVQPAGWAFGIWGVIYLWLLAGALWG
WFRAPHDPDWQQMRIPLLVSLCLGIFWIAAANAAPILATVMIFAMAAGAIVAMLRAGDDARVWQVRPVAL
YAGWLTVASGVGTGVVLSGYGVMTAQSAALTMLALVMLVALWVQFRRPAEWAYPVAIIWGLCGVCAANLP
SGNWPVIVLSAIGVAALAAGFVLRGRAGKSRRAS
>gi|56696372|ref|YP_166729.1| LuxR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MRDLSGEFDHSEVRRRVGQKLLDLLKADYFASYVWDSDAQQFVSCVQINMTDDNLRRYESYFQFHDPITP
TLQRRKKATPVSEVMRHDRLVKTEFFNDFLKQDGLCYGMNYFAYDRGDNIGDLRIWRGAHREDFTPRDAQ
FVDAVGPSLVNALIRARSAKEQVPSLRFAQIADDLGFTSREAEVSDLLVTGLTDEEICTKLGFSKPTLRS
HIASIFRKSGLNRRSQLAQFLAEKNHHL
>gi|56696373|ref|YP_166730.1| indole acetimide hydrolase [Ruegeria pomeroyi DSS-3]
MTLDLARLSATETVAAIREGSLSPVAYAEALADRAARHAGLNALQSFDAGDLIQAVRQAHAAHRLGALSG
LPVVAKDNINTTTHPTSAGTGALLGHKPATDAGVVRRITAAGGVIGAKAGMHELAFGITSNNAVTGAVRN
PHDPALIPGGSSGGTAAAIAAGIFPLGLGTDTGGSCRIPAALCGTVGFRPSTGRYPRDGVVPISHTLDTV
GSFARCVADISLLDEVMTGHPTLRRDDLAGVRLGLPTVRFFENLDPAVERATADALTRLEAAGATIVEVS
LQDIWAHAEAFSIPVGLYEVVRDLPHYLQEHAPEVSFEALVAGIGSPDVKGFIASQLGEDAIPEQAYREA
MEVHRPAMLRIYRSVFGENALDAIVFPTTPLTARPIGDDETVELNGARVPTFPTYIRNTDLAPNIGAPGI
SLPCQLSSGLPVGIEFDALPGADGSLLALASAAEKAMAQ
>gi|56696374|ref|YP_166731.1| regulatory protein, putative [Ruegeria pomeroyi DSS-3]
MMFKMKAKLLAGAAVALVLGTASAVADIKVGVLLPESGPAGLFGPSTRNSALLAAEAINAGGGINGEQIE
LVFADVGVPPAEAAQAALRLWKGQGAQAFVGMHDSAVREALIGRFNGQVPYVYTPVYEGNSCAPGLYVTG
ETPSQQLAPVIPYLAGKEGVSKWYLIGHDYNWPRDTNALAKGYIAEAGGEVVGEEYVPFTVSEFDSSLQR
IRESGADAVLITLVGGGSVGFNVSFAGFGLDDQAIRLGTLIEENTLAGIGAENADRLYSSSGYFASIKTE
AAASFAADYAAAFGGDGAALNGLGQSAYEGLMLLAALANKAGSLDVAAMDAAAEGTSWTSPRGANVLTGR
HMAQTIYLADGSGGAFEVVAAFDSVASSEACTN
>gi|56696375|ref|YP_166732.1| branched-chain amino acid ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MSSVLFLNLAWQISTLALVALGLAIVFGKLRIMNMAHGEFVMIGAYAPVITSSLGLSGWWQLPVCLLSVG
LVAFVLERAIIRHLYGRMFDSLLATWGIAILLRETVELIFGRGYQSVSPPIGGTLRLFGADYPAYRIAVI
VGIVLGFAALYWWSTRSRVAVRIKAMVGNPELAEAVGIDTARLSAGAFVFGCCTAGLAGLVLAPTIRIEP
MMGLDYLIRSFFALVVGGLGSLEGLGIGAGIIAGTQSVLGAVANQTYGYLAVLTLSILFLWVKPDGIRSS
SR
>gi|56696376|ref|YP_166733.1| branched-chain amino acid ABC transporter, permease/ATP-binding protein [Ruegeria pomeroyi DSS-3]
MASVLLPVSLLLAALLLIPELFGDFTAYQIGLYLIYGIAAQGIGFLWGKTGVLPLGQALFFGFAAYVTAI
TLRAETGLITELALAVAVLVAIAVFACALAALIFRGRNDSGPYFSLITLALVMIAEQIAGTATTLTGGFN
GLSGFDSLGKLDPFAGFYYVIVGVTVAVSLLLFVLNRLPVNLIARAVADNEPRLQLLGFPTHIIKGAAFA
FSAVIAALAGGGCLPSHQGIVTPTSMGFGLSAELVILTAVGGRYHVLGPLIGAVLVGWASAELRDSFPYW
ELLMAVAFILVVLKAPGGIAELLEAGYRRVRATKPGAPSKVIAAPPTKAVDAAGPLRFDDVHLQIGVVRI
LNGVSFQTPATGIVSIIGPNGAGKTSTLNTITGNLRITGGRITFGRRKIDSRPPYKALHSGIGRKLQVPS
VFFSMSVSENLAIAMMANRSRLLDLLRPSTYRWRSRSLSDLLDHPSVPLKEELVEPVDHLPQGHRQFLEY
AMTIAAEPQVLLLDEPCAGLSPDETALMTDLVRHYQAETGGLVIVIEHDMSIVEAISDKVLVMHLGQVLA
FDTFEQVRRNPEVQAVYAGGTK
>gi|56696377|ref|YP_166734.1| branched-chain amino acid ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MSALLEIDALTGGYRDTNVLFGLSARIDAGSVLGVFGRNGVGKTTLARLVQGSLLAVSGDIRISGHSVAA
RPAHVRRAMGIGYMPQTSMVFDDLTVRENLNLGTNRDTPERYFERFPRLAERLDQPAGTMSGGERKILAF
VRTMIEDTSILVLDEPSEGVQPENIELMADCLEERAAAGAAVLLCEQNLGFLARISTGYLGLDAGKVVLE
KPADEVSVAQLRSVLSL
>gi|56696378|ref|YP_166735.1| 2-hydroxychromene-2-carboxylate isomerase, putative [Ruegeria pomeroyi DSS-3]
MGRARYQPDRAITCHATFLSWALSRPGIGNQMSFDSLVKSRIIAHIVGERRQMQRRAAFERRRARRGAGH
VVDYFHDMADPYCHLTAQVLHRFQERYDIALRPHLISGPPDWAAPDRAGLDAYARADAARLAQRAGLSFP
ATPVPPTAERLARARAQLAASLTQPDFAQTAVALSNAVWQGAAFPTAPETDPAEAMAQGDARLAQQGHYL
GATFCYGGEWYWGLDRLHYLETRLRALGAARPGAPTDLIFSPPDPDPQPAHHRGEVIEAFISFRSPYSYL
AFDRARDLARARGAEFRFRPVLPMVMRGLPVPRAKRLYIIHDAAREARRLGLPFGRICDPLGLAVERGYA
LIGYAREAGRLDDYASSFLRGVWAEGIDARTDRGLARIVERAGLDWDRARPRLQSDAWRAEVEDNRNALS
ALGLWGVPSFRVEDRAFWGQDRLWLFDTDRAKGS
>gi|56696379|ref|YP_166736.1| ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MTENTYTIRNLKKIYGHGETAVHALRGVDLDIPAGEFVVLLGASGSGKSTLLNIIGGLDRASEGTALFRD
RELTTMSDSELTRYRRDHVGFVFQFYNLMPSLTARENVELVTEIARDPMDADTALALVGLAERAGHFPAQ
LSGGEQQRVAIARAVAKQPDVLFCDEPTGALDSTTGRAVLQVLKEVNERLGATVLVVTHAASQAAMADRV
IRFGDGQVIEVKVNETKLTPEQIEW
>gi|56696380|ref|YP_166737.1| ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MSALSLKLGRDLWRIKGQAVAIALVVAVGVLLQVMQTGLVRSLDETRRAYYERYRLAEVFAPVTRAPVLA
AAELRKIAGVAAVETRVVGAALVDLPGAVVPVRAQVTSLPGLGAPRLNDVLLTDGRGLSRERPDEILLLQ
SFARAHDLSPGDRISATMNGARHEFTISGLAVSPEFIYTTAPGELVPDDSRFAVLWMTRTALEAAFDMDG
AFNEALLSLSRGTQPDAVMAELDRLLDRYGGTGAYALDDLPSNKFVVEEIAGLKRTSATVPPVFMAVAAF
LLYIVISRLVDAERKEIGLMKAFGYTSWEVGAHYLKMVLVIAVGGAALGGVLGILAGRWMVDLYMLYYKF
PFLVFRLDPSSFATGFGVSVLAASGGGLLVLRRVFALTPAVAMRPAAPADYSRARPLAGWLGRVVDQPTR
MVLRRLVRQPVRMGGAIAGVGAATALGAAMASLLASYDTMVELSFGILDRSDVTVTFIHPIAEQGRHDLA
AIPGVIEVEPIRVVSAVLRNGRHSYRGAVNGMIEAPRLYRAVDADMTDIPIRRDGIILSTGLARELDIAA
GDRLVLDVREGRRPLVEVPVSGISESLIGSPAYMEIGALNRLLKEPQRISGAFLRVDPAQGDSVYRILKD
RPMVAGVALKSETRAALREVLDRGAGAMRYVMALVAGVITFGVIYNAARVAQAERERDLAGLRVLGFTRG
EVAFVLLGELAVVVVLAMPLGALGGYWLNLAVSAGFSTDLYQIPASFGLVGFGQAMIVVLIAALLSGWLV
KRDIDRTDLILALKNRE
>gi|56696381|ref|YP_166738.1| RND family efflux transporter MFP subunit [Ruegeria pomeroyi DSS-3]
MTTLARQQRRSRSFLTLVTALGVAGFLAYAFWPRPMLVDMAEVVQGRMVLTIDEEGRTRVKEPYVVSSPV
AGELQRVTVEPGEVVERGKTVVAQMRPANPSALDVRTREQAHAAVTAAEAALRLAHADLNAAEAKRDFAE
SELDRAGKLVERGVTSQVTLQRAEQEARVARANLDTVSAAIAMREAELANARAQLIGFDDAALGAVLSER
NPEGYSIPLRAPIDGTILKVIQKSETTLPAGAPILEIGDIEGDLEVMAELLSSDAVQVQTGDRVIITNWG
GARDLVGIVSRIDPYGYTKHSALGVEEQRVQVIIQFETPSDKRENLGHGYRVEVQIVVWEREDALIVPSA
ALFRHGDAWAVFAVEEGRAALREVEAGRNNGREAEILSGLEPGARVVLFPSAELVEGMKLAQRQLD
>gi|56696382|ref|YP_166739.1| fumarate hydratase, class I, putative [Ruegeria pomeroyi DSS-3]
MGVIRESDMIESIAEALQYISYYHPADFIGTMTSAWEREENPGAKAAMAQILVNSRMCAMGRRPICQDTG
AANIHVKVGVQAKTDFSRSLQEICDEGTRQGYQRDTNPLRASVVVDPFGARKNSGDNTPCMLTVEMVAGD
TIEVEVAAKGGGSENKSKFTTLNPSGNVADWVVQTVETLGAGWCPPGVLGIGVGGNADKAMALAKQALSE
PLDMSDLLRRGPSDKTEELRLEIYDRVNALGIGAQGLGGVTTVLDVKIKSFPTHAASLPVGLIPNCAATR
HVHFTLDGSGAAEFTPPSMDLYPDILLDAAGAQATRLDLDDLNDTVLASLEPGQTLLLSGTLYTGRDAAH
KRMVDMLDKGEPLPVDLKGKAIYYVGPVDAVGDEVIGPAGPTTSTRMDKFTDRILGDTGLKVMVGKAERG
PVAIEAIAKHKAAYLIAVGGAAYLVSKAIKAARPVAFQDLGMEAIYELRVEDMPVSVAVDTQGNSIHQTG
PAKWRRATAAGS
>gi|56696383|ref|YP_166740.1| alpha/beta fold family hydrolase [Ruegeria pomeroyi DSS-3]
MQQRTVTAGVLEVSYLESGPADGWPCILSHGFPYDVQTYAEAAPLLAAAGARVILPWLRGYDPTRFLSPD
TPRSGEQAALAADLRALMDALGIGRAVLGGYDWGGRASCIVAALWPDRVEALVSGNSYNIQNIPRSGEPE
TPEVEASFWYQYYFHSERGRRGLERDRRALARTLWRMWSPTWAFDAAEFERTAAAFDNPDFVEVVIHSYR
HRFGLVPGDPAYAHIETQLVAQPKISVPTVAIDGDRDGVDTGTAGHAAQFTGPFDHRVFKGAGHNLPQER
PRDWAQAVLDARAMARP
>gi|56696384|ref|YP_166741.1| pyrroloquinoline quinone biosynthesis protein PqqE [Ruegeria pomeroyi DSS-3]
MPNSGGEAPEMTVPAPIAMLAELTHRCPLACPYCSNPLALHGKARELDTQTWARAFDEAAALGVLQLHLS
GGEPASRPDLVELTRAAHEAGLYTNLITSGIGLTPARLDALEAVGLDHIQLSLQGTTPDLADRIGGYKGG
FARKMAVAAEIKARGIPLTLNAVMHRHNLDDLERTIELAIELGARRLEVACVQFHGWATRNRAALLPSRA
QTEAAKRIVAEAEARLRGTLAFDFVPPDYYADYPKACMGGWGSAGLNIAPDGTVLPCHAAETIPHLSFDR
FPDKTLREIWYEGAAFNAYRGTDHLPETCRSCDRVNIDFGGCRCQALALAGDPAATDPVCSRSPDHHKVT
ALLEAALAGGDGAEFTYRRMPRKG
>gi|56696385|ref|YP_166742.1| coenzyme PQQ synthesis protein D [Ruegeria pomeroyi DSS-3]
MTLALAPTDRPYLPRGVRLVTDRVRGGIVLLAPEKAVALDAVGEAILSRVDGQTSLAALVDQLVEAYDAP
REQIEQDVQAFLQGLRARMFLMVAP
>gi|56696386|ref|YP_166743.1| pyrroloquinoline quinone biosynthesis protein PqqC [Ruegeria pomeroyi DSS-3]
MSREDLEARLRAIGAERYHDKHPFHHKLHGGDCTPDQVRAWVINRWAYQAAIPMKDAAFLSRCADPDIRR
AWRSRIEDHDGGVDSGGGLRRWLKLAEAVGLDPDYVASGRGILPATRFAVEAYFHYVREQPLLQAVASSL
TELFAPKIHENRIEGLLRHYDFADESSLSYFRKRLSEAPRDVAYGLGWVLDHADTPEKEDMACAALIFKT
DVLWAQLDALWGAYVDGHVPPGAWRPGEGMA
>gi|56696387|ref|YP_166744.1| pyrroloquinoline quinone biosynthesis protein PqqB [Ruegeria pomeroyi DSS-3]
MKIVVLGAAAGGGLPQWNCGCVNCSDARAGRLRPSGQSSLAVSADGSRWSILNASPDIRQQMQDRSVLHP
QGLRGSPVASVLVTNGDIDHIAGLLSLREQTPFDLFATAGIHEVLEGNRIFDALARDKVARRPVALESPF
ALHDGLEAMLFAVPGKVPLFMEGESVDTGLIGEQTVGVRLSDGRNTAYYIPGCAYVPDDLLHRLSDAGHL
LFDGTLWDDDEMIRSGTGIKTGRRMGHIPISGPDGSLVRLAGLAADKTYIHINNTNPVWRAGSAERAELA
RRGWQVAHDGLEIVL
>gi|56696388|ref|YP_166745.1| coenzyme PQQ biosynthesis protein A [Ruegeria pomeroyi DSS-3]
MAWTAPKLREVNCGMEINMYAPAEDEGGRGTDPIL
>gi|56696389|ref|YP_166746.1| sensor histidine kinase/response regulator [Ruegeria pomeroyi DSS-3]
MPGSLINPTDTPDRQIEKLVKINAALMRRVEQATDASGAAYAQFERAALLEEEVRNRTRDLERALDLLND
SNARLAEANRATEEARSNLANAIETVQEGFALFDPDERLVMCNSRFGLHMPDIRDRFRPGITFRQYVDLV
SGSRYLSLPENKTPRDWAAQRIRRHKDDHVIFNVRMVGSRWVQVSEHRTPDGGTVILQTDVSDIMRLERQ
ERDRMLDDQARLIRATLEHLDQGVCIFDNQGRLAGWNQRVGEMLSIPARRFSMGVRFFSLFEGFARNSSY
SSGITEDTIRAWINATDSRPPIGFEIRQGENKTLSVHAQEMPDRGFVISFSDVSAERAAVRAIRQANELL
EARVAERTLELADALSEAERANASKSRFVAAASHDLLQPLSAAKLYMASIEPGQDPSQTHQIADKARRSL
DSVETILEALLDISTLDSGKAEVHRAPVPLGVILAQLAEELAPTARAKGLDLRVIPSSAMVLSDATYLRR
IAQNLIVNAIRYTRKGKIVVGVRRRGKSVRLEVWDTGPGIAAEQRDIIFREFQRLDAAASAAEGMGLGLA
IVDRACALLGHPLDLVSTVGRGSGFLVELLLAPTPDFTSFRRTSGPALTPSGLDGLIVLLVENDAELRNA
LTIAMEAWDVCVLPVASIAEALALIDDEGIQPDAVIADLQLDRGEMGTVLLNMIRTRVGPVPSCIITASR
SPAVIDICVQQGWAVFHKPIAAETLRGFLSGATPRTS
>gi|56696390|ref|YP_166747.1| GfdT protein [Ruegeria pomeroyi DSS-3]
MDLSQGPVRAAQAAPQVLCTASVHHDHPHAIETLVEALGPVELELILLMASPQTDIPALLARAAAVLPGT
RIVGCTTAGEISAAGYTEGEIVAIGMPRAYFKAQTMLIDDLTDYDAQAIIDRMIQTRNDLAAARPEWGHE
FNFLLIDGLSTLEDRLVSDLAMGLGPVPLFGGSAGDGERFGTTFVFHEGRAHGNAAVLMQVRTRCPIQVF
KTDHLIPTEKRMVVTGADPDRRLVHEINAEPAAREYARVLGKDPEQLTTFTFAAHPVVVRIGGQHHVRSI
QRVAENGDLVFFSAIDEGLVLTLAEARDMREHLREELGRLAADGPPAVILGCDCLLRRMEAQQKQVLGAL
SDILRENRVVGFSTYGEQFNSMHVNQTLTGVAIYPPDDM
>gi|56696391|ref|YP_166748.1| LuxR family DNA-binding response regulator [Ruegeria pomeroyi DSS-3]
MQTQAGTSPAQPFRSALIVDDHPLFCDALSMTLQAVSGIRTVQTLARLEDALDWLGNHPAPDLVILDLNL
PDVEGLDGLVRIRTAARAPVIVVSSMADNRVISGVIQAGAAGFVPKHSQREVFRTAIETVSTGAVFTPEG
FVDVAREGGDGPEVEDALARLSALTNQQARILQLVCEGKLNKQIAYDLSIAETTVKAHVTAIMRKLGVQS
RTQAVLIAKKTSFSSFLPETQKQA
>gi|56696392|ref|YP_166749.1| quinoprotein ethanol dehydrogenase [Ruegeria pomeroyi DSS-3]
MGWFGLERMQGRKPMNKIIMAAVAGLVATAGWHSAALAAGVTEEDLANDTANTSSVLTNGMGRHLQRYSP
LDILNKDNVKNLMPAWAFSLGGEKQRGQETQPLIHDGVMYITGSYSRMYAIDVNTGEELWQYDARLPEGI
LPCCDVINRGGAIYGDKIYFGTLDARIVALDLKTGDVVWNKKIADYKAGYSYTAAPLIVKGLVITGNSGG
EFGIVGEVQARDAETGEMVWTRPVIEGHMGTFKGEESTMTGTLNATWPGDMWKTGGGATWLGGSYDAETD
TLVFGAGNPAPWNSWLRDAGQNNDGKGDNLYAASRIGINPDNGEIKWHFQTTPREGWDYDGVNEVVAYTD
RDGNKRWATADRNGYFYVLNREDGKFVRGVPFVKDITWASGLDENGRPIFNEDNRPGDPAAAADGAKGEV
IFASPSFLGGKNWMPMAFSQKTGNFYVPSNEWGMDIWNEPITYKKGAAYLGAGFTIKPNYEDHIGSLKAI
DPDTGELKWEFKNDAPLWGGVMTTAGGLVFTGTPEGKFIAFDDETGEILWSFQTGSGIVGQPVTWEMDGE
QYVSVISGWGGAVPLWGGEVAKKVNYLNQGGLLWTFKLPKQLAAAN
>gi|56696393|ref|YP_166750.1| cytochrome c family protein [Ruegeria pomeroyi DSS-3]
MRPVSYALALMMAASPALADTKFEQIKIEAGAALYDGECRRCHASDTDHESYGPPLENVLGRGAGTYPDY
DYSIALEASGIVWTPAALRAWMEDNTGFMPGTKMRHVGIEDRTVQDFILAYLASLSTRDPKQISD
>gi|56696394|ref|YP_166751.1| efflux ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MNAALIALRAIVLREALRFVRQRGRFVAALVRPLIWLLVFAAGFRAALGLSITPPYQTYITYEVYIVPGL
CGMIALFNGMQSSLSLVYDREMGSMRLLLTSPLPRWWLLFCRLLASTAISILQTYCFLAVAAAFGIQLPV
WGYVAVLPALVVAGIMLGALGLALSSLIRQLENFAGVMNFVIFPMFFLSTALYPLWKMAESSTLLRDICA
LNPFTHAVELIRFALYGQFNGPALGWTVLAGTVFLGLAFWGYDPARGLLRRKG
>gi|56696395|ref|YP_166752.1| efflux ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MTGLSVRNLDYSYGSRRALDTVSFDVAPGRFAALLGPNGAGKSTLFSLLTRLFTTRSGQISVAGHDLSQN
PRAALARIGVVFQQPTLDLDLSVMRNLTYFAALHGLSGRTAHTRIAAALERLDLSERAHERARDLNGGHR
RRTEIARALIHDPSVLLLDEPTVGLDAASRKAITDHVHALSRERGLTVLWATHLTDEIEDDDQLLILHRG
RLLQDGTAGALRGALPLREHFLSQTSDKTGEPA
>gi|56696396|ref|YP_166753.1| hypothetical protein SPO1512 [Ruegeria pomeroyi DSS-3]
MMLKPCLAALLVAALPLSALADGDDGRLGLAGLLSGKNKEDLPPIILSAGMPLADAPWVLQSGTYYEFEI
QGDGSQELALVGPEFFRAIWIDEIVVEGLEIRPLGLDSVEFDEAGEMEIGFVAIKPGRYYLKVPGSTGET
QRLEITIK
>gi|56696397|ref|YP_166754.1| hypothetical protein SPO1513 [Ruegeria pomeroyi DSS-3]
MRTALALLALTLAAPLGAEEIWVTNEKDDTISVIDVATLEVVRTIATGERPRGITFSHDFSRVYICASDS
DTVQVMDPETGEILHDLPSGEDPEQFVLHPNDRHLYIANEDDAITTVVDTETRRVIAQIDVGIEPEGMAV
SPDGRIAITTSETTNMAHWIDTETRQLFANTLVDARPRHAEFVHGGAELWVSSEIGGTVTVFDVATQAEK
AKIAFEVKGVHPDRVQPVGFELTADEKTAFVALGPSNHVAVVDTATYEVVDYILVGRRVWHMAFNSDKSL
LFTTNGVSGDVTVIDVARREAIKSIKVGRFPWGAALRP
>gi|56696398|ref|YP_166755.1| hypothetical protein SPO1514 [Ruegeria pomeroyi DSS-3]
MRVHSLLRPIIAALAMAMAALPALGEVQLRVAYLRQEVERPPVLSNLDPEPAGLGLDGAQLGLEDNRTSG
RFLGQTYTLDTYEVPIGGDLEAAARAALAEARMLVIDAPAEAVLRIADLAEAEGALLFNAGAEESALRDA
ACRANLLHTAPSLAMRADALMQVLQRKRFSRLAMITGHGAPDLAFAEALRRSAAKFGLKMVADKPWPFDA
DMRRNASQEVPLFTQDFAEHDMLLIADEIGDFGRYIAYNTWTPRPVAGSEGLVPVAWSRVVEQWGAAQLQ
SRFWDLAGRDMRPRDYAAWAALRVLGEAVTRTNSTDPATLRAYILSDAFELAGFKGRPMSFRPWNGQLRQ
PIPVVTERAVVMQAPVEGFLHQRSELDTLGLDAPESRCTAFQE
>gi|56696399|ref|YP_166756.1| cytochrome c550, putative [Ruegeria pomeroyi DSS-3]
MINAAKAGALSLCLSAGMALAHGDVAPQPVNTDALPEVGEDWLIENPYRAETAGEEVWAAAIRIGDSGYN
QNCARCHGLGVVSGGLAPDLRYLEAAEYGDEWYVERFRHGYTQNGITKMPGFGDLLGQKAAWAIRTYIET
RPDDGALDAHTPRLKEIRDQLAAGEGDAAALAAELSEIAAEVETASGAPVADSAASRAASLISGAAPNFV
AAAEALTIGLSAAH
>gi|56696400|ref|YP_166757.1| amino acid ABC transporter, periplasmic substrate-binding protein, putative [Ruegeria pomeroyi DSS-3]
MSMARAGTLGAALAVLLLGAGLPAWAQTRCGDHVPQARPQNAGRDIVGADLDAIQERGWIAFAAYEDFAP
WSWEENGSVRGVDIELGRLIAEELGVEARFTLVAAGENLEADLRNWVWKGPIVGGRVANVMLHVPYDSNF
ACRVEQVVFTGQYHVERMGIAFGRAEYPEDKPVPAYFRFDTVGVENDSIADFYLTAFPGGQLRANIRRYP
HMGAAMAGLATGEVKTVMGPLAQLEHGLTPELDVHSPPLPGFATGSWTVGVAVHFAYRPLAYAVDDAIVA
GIGDGRIGEIFGAYGLTFSPPELR
>gi|56696401|ref|YP_166758.1| carbon monoxide dehydrogenase operon G protein [Ruegeria pomeroyi DSS-3]
MELSDSKVIAADRATVWAALLSPEVLKECVPGCQEMSGSPDEGFEATVVQKVGPVKATFKGGVTLSEMVA
PESLTLSGEGKGGAAGFAKGAARVRLEEGADGTTILSYEVEAKVGGKLAQLGSRIIDGFARKMADQFFTR
FQEVLEGPGEAESPEAEASGDAKKKGWFKRVISG
>gi|56696402|ref|YP_166759.1| carbon-monoxide dehydrogenase, small subunit [Ruegeria pomeroyi DSS-3]
MPEINMVVNGRSVRGEVEPRDLLVDFLREGLSLTGTHVGCDTGQCGACVVHVDGVAVKSCNMLAVEAAGS
EVSTIEGQAAPDGTLNALQQAFQDHHGLQCGFCTPGMVMSAAALLKDNPTPSEAEVRAHLEGNLCRCTGY
HNIVRAIMAASGQDVSGIAAE
>gi|56696403|ref|YP_166760.1| carbon monoxide dehydrogenase, large subunit [Ruegeria pomeroyi DSS-3]
MPKDSGIGASSKRREDVRFLTGAGNYTDDINLHGQAYVHFLRSDMAHGRIVSLDTAAAAAMPGVVRIFTG
ADFEGVGGLPCGWQVTDKHGEPMQEPGHPVLAQGKVRHVGDPIAAVVAETPDQARDAAEAIGVEIEELPA
VIDMKAALAEGAAKVHDDLSSNLCYDWGFVEENKGAVDAAFAEAAHVTTLELVNNRLVANPMEPRVAIGD
YARATGDSTLYTTSQNPHVIRLLMGAFVLGIPEHKLRVVAPDVGGGFGSKIFHYAEEAFCTFAAKALARP
VKWTSSRSEAFMSDAHGRDHVTRIELALDAQNNFTALRTETLANMGAYLSTFAPSVPTWLHGTLMAGNYK
TPLIYVNVKAVFTNTVPVDAYRGAGRPEATYQLERVIDKAARELGVDPIALRRQNFVTEFPYQTPVAVVY
DTGDYNATMDKLEEIADLSGFAARRAESEARGKLRGLGINCYIEACGIAPSNLVGQLGARAGLYDAATVR
VNATGSISVMVGAHSHGQGHETAFPQVVAEMLGIDESMIEIVHGDSSKIPFGMGTYGSRSLAVCGSAMVR
ATEKIINKAKKIAAHLMEASEADIELKDGQFSVAGTDKSVAWGDVTLAAYVPHNYPLEDIEPGLEETAFY
DPSNFTYPAGAYACEVEVDPDTGKVTVERFSAADDFGNIVNPMIVSGQVHGGLGQGIGQALLENCAYDPE
TGQLLSASYMDYAMPRADDVPFYAVDHSCATPCTHNPLGVKGCGEAGAIGSPPAVVNAVIDALQSGGKTV
THIDMPMSPSRVWSAMQG
>gi|56696404|ref|YP_166761.1| carbon monoxide dehydrogenase, medium subunit, putative [Ruegeria pomeroyi DSS-3]
MYNFEFERPGSVAEAVAALKTEEAQALGGGQTLIPTLKQRLAAPAKLVSLGGIAEMKGVCRNDDGSLSIG
GGTTHAEVARAAAAHYPALAALAGGIGDPAVRNRGTIGGSLANNDPSACYPAAALGSGATIVTDRREIAA
DDYFQGLFTTALEEGEIITSVRFPVPEKANYQKFVQPASRFALVGVFAAQTADGTRVAVTGASEDGVFRW
SAAEAALASGASIDGMAPEADGMIADLHGTKPYRAHLTGVLTRRALQAMA
>gi|56696405|ref|YP_166762.1| regulatory protein, putative [Ruegeria pomeroyi DSS-3]
MRALFLSFCLMLTTLAAGADPLTPDQIASYVKPPLLLGEEVDETGVYALIDVYGKPAGYVFETEPLAPLP
GFSGAPVNLLVMLDATGSFIEVRLIEQNEPIFVSGLGVAPFEKFLEQYRGLNIASPMVVGTPYGNSGGGA
SALTYLDGVTKATASIRIAHETVLAASLAVARERMQGVATAPPRAPDLDHDEPLDWAALVAQGIASHHLV
SNARVQAGFDGTLWAGDDPEALADPEAAHVDLWILDLGPPAIARAVLSAQALEELQQFQALSPHDEPLLL
IESARHGLVGEDFVRNTAPDLISAQQGGLPVALRDADLFVELAPGLPEGRAMILRADRRLGFDPTSEWEL
TLQIQRAHGSFQPVIGSRSFGFTHATPERFFLSETGPSALPPWQEALRGRAGDLGLLVVFLGGLIPALLL
GQSRLAGLRTFVPLRLGVLAVTLGFVGWWAQGQLSVVTPLAVLRGALDGGSLAFLLYDPVSLLLWGAAVL
GFLLWGRGLFCGWLCPYGAMQEFAHHLGRWLHLPRLPLPDAWDRQLKWLKYAVLATLVAIVLLAPAELET
AAEVEPFKTAITTFFLREWYFALYAAAWIALSMVTFKGFCRYVCPLGALMAIGGLLRLRRWIPRRPECGS
PCQLCRVRCNYRAIRPDGEIAYDECFQCLDCVTIHDSPTQCVPLILARRRSEARAQNLW
>gi|56696406|ref|YP_166763.1| hypothetical protein SPO1522 [Ruegeria pomeroyi DSS-3]
MRIAAALLAIALTGLSGAVWAETSAAIVARKPDLFHPETGLRIDRQRAPVPEDIPPPARKISALWARKLI
ARGALALDVYGAAQSRYDELDGTWLVPEPRQSLPGAVWLPEVGRGVLDAALQVYLERELERLTGGSKARA
IVVFCVADCWMSWNAAQRIAGMGYLQVYWFPLGTDGWRELGWPLEPVEPVPVPVD
>gi|56696407|ref|YP_166764.1| metallo-beta-lactamase family protein [Ruegeria pomeroyi DSS-3]
MPSRRALLAGAAAGLGLTALPAAPVFAQAKLRYDLAPIPVLPGVWMIEGVTDYFDKVNGGAIVNCAVLQG
QSGLILIDSGPSRRYGEALAATLRALDLRGVSAVVNTHHHPDHFFGNQVFADRPILALGDTLAAARRDGD
AFADNMYRLLGDWMRGTEPVPPNTALDGGEVTIDGRRFATLPLSGHTEADLALVDVETGLLITGDLAFLD
RAPTTPHADLAGWQQALTTLEGLGAPAVLPGHGPFDRTGASLRQTRAYLSWLEATLHDAARTGLDMVEVM
DLPLPQEFAAMGAQPQEFHRSVAHLFPGVERAVLPRAN
>gi|56696408|ref|YP_166765.1| hypothetical protein SPO1524 [Ruegeria pomeroyi DSS-3]
MFRYGLSLCATLLAGAALAADTPQVPLDDPFASGMWEDHQIAILGDPADIRFDDRVRVFAPAAAEDAFHV
PLLIDATAIPDVEEIVVTADYGPIPKILSYFPGEAQAKLALRFKIDQATAVRASVRTKSGSWHVGGTLID
AAGGGCTAPAEAYASDDWEEKLGEIHGRLWAATGRARLIVDHPMDTGLADGIPVFIIRDLSFTNDAGQEL
ARLALSEPVNEDPAFTLYFDPARMPPLLHVSGRDNNGNQIAGTLTGEEVN
>gi|56696409|ref|YP_166766.1| AcrB/AcrD/AcrF family transporter [Ruegeria pomeroyi DSS-3]
MSEGSQNTPLGIAGGLTRGFIGSALTPLMILAALAMGLVALISLPREEEPQISVPLVDIHIQAPGLKAED
AVKLVTEPMETIVKAIGDVDHVYSQTGDDYAMVTARFLVGTPADTAILRVHDKVRANMDRIPVGIGEPLI
VGRGIDDVAIVSLTLSPRDGAGDVSANDLTRIARELQVQLAKIGDVGLTYLVGEAPEAIRIAPDPERLAL
YGVTLQQLAAKVEGANRALATGLVRDGGEQIALVAGETLHAPAEIANLLLTTRDNRPVYVRDVADVRFVP
DTSERIVANVTRDDSGGFRRSPAVTLALAKRAGANAVVVAEEILHRVHLLEHDLIPDSVEVTVTRDYGET
ANEKANELLFHLGLATVSIVVLVLFSIGWRESIVVAVVIPVTILLTLFAAWVMGYTLNRVSLFALIFSIG
ILVDDAIVVIENIARHWAMPDSASRTQKAIRAVAEVGNPTIVATLTVVAALLPMLFVSGLMGPYMSPIPA
NASAAMIFSFFVAVIITPWLMVKIAGRAPAHAHDAAAQHGGALGRLYRAVARPLLRTKSGSGLFLLVAAV
LSFGSLGALYTRDVTVKLLPFDNKSELSVVIDLPEGASVEDTDAVAQQVARRVLELPEVISAQTHAGDAA
PFNFNGLVRHYYLRARPELGDVQINLLPKDARTRTSHDIALDIRERLSTLDLPEGTVLKTVEPPPGPPVI
ATLLAEVYGPDADSRRAAATRIREAFESVPFVVDVDDSFGTQARRLRATVSTDQLEFFGVQERDVFSTLA
ILNAGQTVGYSHRGEGRRPIPIEVARDSADRVVDERFLSTPVPANVLPGARGVVELGDVVELREERASYP
VFRHNGRAAEMVMAELAGDFEAPLYGMLAVAEALDAMDWPEGGKPQIRLNGQPEDESVITLLWDGEWEVT
WITFRDMGAAFGVALLGIYILVVAQFGSFRLPLVVLTPVPLTFLGIIIGHWLFNAPFSAPSMIGFIALAG
IIVRNSILLVDFIRHANPERDKIETLIEAGAIRFKPILLTAVAAMIGAAVILTDPIFQGLALSLLFGLLS
STLLTVLVIPAIYRVFKT
>gi|56696410|ref|YP_166767.1| RND family efflux transporter MFP subunit [Ruegeria pomeroyi DSS-3]
MKMILPALLLCLAALSAVPALAETTARRVTVTEWKTVFAKVEPRDSLPARSRLGGTLQEITVAEGSAVTR
GQQIGTTVDEKLELELRAIDAQLSALGSELSNAEAELARGQNLLERGVTTEQNVDALRTRVQVIEGRIGT
TSAQRDVLLQRTDEGRILAPISGTVIDVPVTEGSVVLPGEMIAVIGGGGFFLRLAVPERHADFLAEGDSI
AIAGIEGAETGTLAKLYPQIENGRVIADVEVAGLSSKFIGRRVLVRLPVGRAEVVAVPPAAVASRMGLDF
VRVARPDGSASERVVVIGTPVEAEGEPLVEILSGLKGGEVLVAGHE
>gi|56696411|ref|YP_166768.1| hypothetical protein SPO1527 [Ruegeria pomeroyi DSS-3]
MSFRIEEKIVLTASDMARLQADLQARGMVPLYPARLIRSVYFDTSGLQMFSDSEEGVLPRKKVRLRRYPE
QADAGAVLETKISSVEGRFKTALPVAPETERRLLRQGHFDRDYGTLQAMVAVSYRRAYYSLDGLRITFDR
DIAYARPDGQTARREAWTVCELKAPAEAPLDALHHILPVPRRRFSKFCNGVSAVIARA
>gi|56696412|ref|YP_166769.1| hypothetical protein SPO1528 [Ruegeria pomeroyi DSS-3]
MWRRLRPLALLPALLLAPAAEAGCDFATGQYRAELADIASIRRIEVNVDKARKWARNGLRIITSEGEQIA
PKYKRSFAGTVSVFYDFGRCDFAARLRQNGDFKDHVELDRGRLLQSLNIRLDEGNIAHAVRFKLFLQKTR
NAENEVLATLLLSRLGFLAPRTRVVDVVQNGTPVRMLWQETVAKEFLEHNRRREGPLLEGDEALLALWSD
RGGYLLEDLGLARVVNGKWVERGAASVAMTVEAFTRLQTAYATYGNSNALDPSQALTGLPLPDTTSAEAA
RIWWDYAALMFAMRASHGLRPHNRKFYWNAFLQGIEPIYYDGEVDLKRSKPRYLRARDRTLYAPHFTADR
MARLAAAVAALDGEAFGARYRALCAGGCAPEAGGHFLTGVAANLPALVLPAEGAPPALADPWPGFTARLF
DHLPEIRSRDIAAPDPASGIATAQLCTRGGCTAQRLDRETLVEALSGAVIDGVEPVMTLGAQAPGGMVYR
TTPLTGWDLTLRHSPGLKVTSDPQGGRLVLTQTAPDDWALLMGDRLEGVEIAFRGLPPPPALNGGDAAPE
QRFNPYGLTGCLTLYGMRLSQVRITATGGGCEDSVNIVSARGDIALLDVQDAVSDAVDMDFADLHVAEAR
ITGAGNDCLDLSGGQYRFDRVLASACGDKAVSVGEASEVAIGDLEASASAIGISSKDGSGVTVGQARIGA
TLHCYEVFRKKQEFPGAYLRLDPAPCSGPAGRVDAESVLDLQGDSG
>gi|56696413|ref|YP_166770.1| hypothetical protein SPO1529 [Ruegeria pomeroyi DSS-3]
MWCACCMARVRRCRISGLPHNLGGGDMGVLTSELDKLLAVALLLCASLLVRQAVIFSGQTWIRTFSHTLT
LLLLPLVTYSLTSVISGNIALSLGMVGALSIVRFRNPVKSPLELVTYFLMISCGIAAAVSVSWLVLLVGS
AVGTLVVAELFNRWSRRVRGVALYTTSFTEGNALHTLEVFSETEMPDLLAHAALVGFDKTPEGIVYRFAS
PSRQDLLTLSGAVNGQTGITRIAFAAA
>gi|56696414|ref|YP_166771.1| integral membrane protein MviN [Ruegeria pomeroyi DSS-3]
MSAARLLANIVLMTALKLVGLLLSVLLIVLQTAAFGTTPAADAYFTVRRFVLSAIAMTFEATNQLAVPEF
VREVQGGGHSGMRRALMRFGIPIIGLLCLIALALWVFAEPVVRLLAPGFDDDRLAKAAELLGVVALCLPL
TGIAALAGAFNFARRRFGLTTLARLLPRVALLPVLLVAGAAVTPLSLSWALVIGVALMALMIAVQGWRDL
RRMGGGGLTTPRRPSTPRRAAAVTINAAAQMAMGWADAALASLTGLGGVTIMFVAQRLLSAAPGAVNSAV
NSAYYTEYSHAAGAEAGARPSIAAAVRISLFLTLPLVAFVMIAATPLITFLLERGAFTAEDTAATADLVR
FLAPLLLVNAVLAAFLPAVLADDGLPLVRVFLWFSAAALLIRFAAGLPLGALFGLKGVASSILLASTGSA
LVLARALHRRHGTLGSWQDLRQIALMIGAAVAAALVSALLWQPFGLGDLVLLCAHALTVAALFLAGCALC
RLPEIEALFALLRRRRHRG
>gi|56696415|ref|YP_166772.1| hypothetical protein SPO1531 [Ruegeria pomeroyi DSS-3]
MLSALACNMKYSSHPAAVAAGRGGNRRGGRMYAYERITDPAGFAAIEDEWRALAEACGGGGVFASHAFLL
SWAETFGQGRRLAVSLLRHKGALVGALPMFHTGQARAVAAMGEGRAGMAQWLLHPDLPDADAALAALLRP
DWLSFWRLEPLETPDAEALERAARRAGLAVRRKATMRACSVTTEGDFDSYLGGLKSKTRQVFRRSERKLA
EMEVRDLRSDRDGRAALDAYLAASRASWKGLTGTGYGAAPEGVAFVEKLFERLGPEACYLAARQVGEVAI
SGRFVLVHDNMHYGMANDFNEEYADLAVGRNSIMQSVRDAFEGGAAGFDFTRCNGLVREVSTDERPLERV
LIHRRGDPTLAAFFAARGLRRLRRKASGWQKGRRGVVS
>gi|56696416|ref|YP_166773.1| hypothetical protein SPO1532 [Ruegeria pomeroyi DSS-3]
MYPLFRSLVLLLIAATAAQAAPLVEHHATAPDLMARPDLRLQQQNGTLAPAPDPVGARQVIRARAGAKQA
GKVGKAALILPFDPLGPGSRIRVTAELFLPPGTPANSIHLFDLECKFCGQPGNPGLRLYLRHGRLRVDRK
KIGGGHAWADDSAPALTSGRWHLVTWDLRLGTDAAPGHSQVYLDGKSVLDNRGRTLPDVPAERAAIDRLQ
IGITANSNPETVTLYLGAVTLERWP
>gi|56696417|ref|YP_166774.1| glycosyl transferase, group 1 family protein [Ruegeria pomeroyi DSS-3]
MDNSPVTPPRLAIVLPHLRSGGIEISTLALIRQLQDRRFRIRLILGSRTGELLDQIPETVEIVDLGGRRA
MASLWALRAALAGMDAVYSGTNARNIAALLAARLLPAHQRPVVIISEHSSPAAYLAMARHPGPRRWLMRR
LYPLADLLAVPTEGLGADWLAALALDRPAVATLPNPVLSPEAMALAQTVAEGNGPPRDPALVLAVGRLHP
AKGHADLIQAFARALRTRPELRLTLLGEGAARPELEALIAALGLQHAVTLPGYSPDVARHMAGAGLLVLP
SHREGFGNVVVEALAQGTPVLATDCDGPRRLLAQAGAAGRIVPIGDIDALARGIVEMAGQPEPLRAAQTA
APTLSARYAHAAAAQTFADCIAPLAARRRG
>gi|56696418|ref|YP_166775.1| sugar transferase [Ruegeria pomeroyi DSS-3]
MKIDIYKVDTDLAGVDGGRRLFDAIAPLPAQVYREAPSVQGLRDGAFVAQPPLVRPHKGPAAPRGLMSPA
TVRSGYVPRYPLFDAALNRVLAALAVMAVAPVLLFLSCLVLLSSGRPVFYSGVRLGKDRKPFKILKFRTL
VPDAAAQTSRSTLPKRTLLETNIGSYLRKSRLDELPQLINILRGDMVFFGPRPVRPELLDLYMREASGFA
LRFNVKPGLVGMSQALLPHSAGKRLRGRFNSLCCRAPMNYWATLGFVLHVGVTVLRRAGRGVLDMVLHLG
SPAMRFNFLRSGFHRPRHTVAQFEMEGETVTAGVVGISDQIVQFVSPLPPRRRRYALTIDRKLASGRHLR
ISVEVEVKSVFPLGVGKSGFLCHASYAAGSPYQRYRIERYLLDETVLST
>gi|56696419|ref|YP_166776.1| polysaccharide deacetylase domain-containing protein [Ruegeria pomeroyi DSS-3]
MMSDARSLTAHTTARRATRRRLLVRLLAVALVSGLAGGAVAALTGAAGWAFGLLAAVSGYLVAARLWRLE
PGVPVLTYHSVSDNAAWLPWRAEISIRPASLDRQLRLFRRMGLQVVDSETLVRARLAGRPVPGNWLALHF
DDGYLDNWVAAAPILRRHGACATLFVSTDFIAPPQPLRPMLGQDGPLRWDGYLSWDELRALEAEGTFRIE
AHGTDHGRIATGPETVDHLTPENAGRLSWMQWARMPGDKHDWYLRRSRPVPLGSAVPISAPALAARGWSP
ATGQESDAAYDARVRAVLATSRTLITREMGRAPVLFCWPQNQTSDRARVLAQQAGFLATTAGQARNTATD
PAATLSRLHIGEDYAGLRCGWIDDLAVRAQIRCFQGFVGWVAVLGAVGALRRIVRVLVRLRSHGRRTGSG
ALQEGMS
>gi|56696420|ref|YP_166777.1| glycosyltransferase, group 1 [Ruegeria pomeroyi DSS-3]
MKLAVIVTEFPKTTETFILRDLMVFLEAGVDLRLYHLAPWRNDQILHDFGAEAGRCARHVPLVSPRSLAA
LAAHPLTAARLAGSIALHQGREAKFAAKSLALLPAAMRLGQELRDWGADHIHAEFAGHPATAAWIAHRVS
GVPYSISCRAHDIFRSQRLLEQKFADAALVRAVSTYASRFLAEHVPGIRQQDVAVIHSSVDVSAITPSAP
PPPEDGFRILYVGSLQQRKGVDVLLKALAGFDRPGWQLDIVGDGPDRAKLEALSAQLGLNDRVHFLGQRP
FGEIDGFYRAASVCVAPSIIGPNGRTEGIPNVMIEALAYARPAISTNVSGIPELIRPGETGWLTEPGDVA
GLTAALTEVHDAPEAASKLAWKGRALVEREFDLRVNARRQLELFAAARKGQAPQGARTVTP
>gi|56696421|ref|YP_166778.1| twin-arginine translocation pathway signal sequence domain-containing protein [Ruegeria pomeroyi DSS-3]
MIAPRPIFVLGLQRSGTTLIGNLLAAHPDVAAATDPHHRGIHESVFFSHFARAWDWRDPAARARAVAAFL
DSDYGRLLDLTAEDCHRLERIGDPEVFFRQAMSAHARQQGALAWVEKSPHHVHEAARIAAAYPDARFVAI
HRDSAGLVRSRLWAYGRVPRAGLARLPAVLRGALSNAYHRRVLRRFAHHFPDRVVTLEYRAFVAGGAASV
AAMIAALGLPSAPGLAPEYAPNSSFAGPDAAASLTRIDHAAIALAGVLCALVPLWLLDRLRAGASSRRRL
EFPRWVWSGLVPPPASHSGPSLAVPLGADTMTHMQENPSPCRD
>gi|56696422|ref|YP_166779.1| chain length determinant protein [Ruegeria pomeroyi DSS-3]
MIHDLPSPARTRPADPTGPRDGANEAPRQNEAGAAIRHVAELMRQSRRMILLLMLGCAALSCAYAVYKLN
FSPVYRASAKVTAQPTDAELRYSQVYVRSSSLDSANVITRSHIEYLKSREIAERARLEVFGAAGAAPEEQ
QIPALLAFAKTAKQQVEAGLRWLNSGSAGAAAGEKDLVTEIQDAIELRMVESSFVMEISVAWEDPKIAAE
LANVLARVYRTRSREQVAATTGELTSFLETQKLATERRLSDLIDERNALRTASGVVEIETERRELLARLF
AESAQRDADRRSLLAIQAQLRAFLPDRPLNRHDGLTQTTKEELNLSRLREVELDAAVVESDKIVARLEQR
IAALAKLETRFEGLNSEIERTRGQLNDIDARLLEVRISEAESIETLRIVDLATPPALPEEPKVVNRTVMG
AMSGFLLAMMLVLSRDYMATRLRTQTDLSGVSGLRVLSPAALGAAELTGAPAAEEKGATASELSRPYLDW
DALDTDDMVAVLDISDPRRAEAVGRRVMQCYPYSDQVHTGLLRRAVRPGNMPPSAAVLITLGRDELSAGE
LRDYLDQLRALSRALPVAVAFVDIRGRVG
>gi|56696423|ref|YP_166780.1| O-antigen polymerase, putative [Ruegeria pomeroyi DSS-3]
MIPAPRQLALGFGGALLAAAAALSGPALAVGALAGALAGFAVLGNTVLGAYLLVALAQLDGIALLVDRHL
PISLFKLVSALVLLSLVLTVRRHPLMQGRLRLSPTAMFTLLFAIWLCVSYLASDWRAYSYDHTKGFLQTL
LLVPILGLTVTAPRHLRRMVLVIAASGAISAVFVILETVFGLRLLPYADEGDVAAWLGAVRSAGASAYNP
TTASHLMAVSLMLALVMALHDRRGRRLWVLISLLCLVALPMMGARSGAIAVAMGIGLIGFRMRHHRLFPA
VALAAVGALVFAVLNAPDTLVERFGVLGDFLGEGDTADRSLLRRLSYNQIGLSLWAENPVTGLGPGAYPV
NYASDAFRWYPGREAEARQLHNAYLEVAVETGIVGIALFLGALLSAAWAALKAGLHPVSEVQVLAQALGV
AMAVFMFASLFMPNEDIKYTWILAALCARAAQLARGWRPDAGQGS
>gi|56696424|ref|YP_166781.1| glycosyl transferase, group 2 [Ruegeria pomeroyi DSS-3]
MTLLFWTCLGLILFSLVGYGLLWIGLARLVRDRPTHPPVTQSATVLIAARNEARDIGAKIRSLRAQRRGA
HRVRVLVVSDGSEDATLAEAEAAAAGDRDIQVIGLSQHGGKAAALNHGLAMIPEGEIVIFSDANSLLDED
ALIRLLAPFADPGVGGSIGQLGIKGRDGLMARAERLYWRYDNALKRAEDRIAGTVSAQGTLYAVRRGLVG
VVPADMADDLAISLGVVARGYRLAYAPGAVAREAVTSNLRGEFGRRVRSTERGWRGLMHYGGLMNPARTG
LYAVQLFCHKVLRRLVAVLLPLLLLSNIALLDQGMFYVVTFLAQIVLCAVALAAVSTVWGKRLPGASVAV
LFVMGHAAIFWALLRYAMGVRSTKWAPVRG
>gi|56696425|ref|YP_166782.1| LysR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MTRPKTWHSLPEYFALRALMQTGTTTGAAHQLGLSQSAVSRSIASLENRLGSPLFEREAGRLRPTQEAVR
LNLRLDPLFEALDRIDGQTEPVRETLRLIAPPSYAHRFLVAQISSFMEMNPAFFVSFEVNTSDEVTRGIL
DDRFDLGISGIEQSRAGVKTMPYRVSGAVCAMPTDHPLARRGQIGPADLHGQDMIALTRRHVRRGQLERL
LHQARATPRIVAEVSTSFAAADLAREGVGVTVINPFPIYHYRAGDLAFVPFASDLEYRSYFLVSETRPMT
RPARAFMRHLRLNTPPDPFSRKA
>gi|56696426|ref|YP_166783.1| renal dipeptidase family protein [Ruegeria pomeroyi DSS-3]
MPATHPAIIDGHNDVLLKLYRAGGLAQAGSFLTGRDGALDLPKAQAGGFGGGFFAVYVPSPMDREARDAE
MTNVSYDLPLPEPIDWEDALPVVLSQAAILFELERQGALSVCRSVGEMRAALAAGRIAAIFHIEGAEGID
PDLHMLDVLHAAGLRSLGPVWSRNTIFGHGVPFRFPSGPDIGPGLSDHGIRLVRRCNQLGILVDLSHMNA
AGFWDVARHSDKPLVATHSNAHALCPISRNLTDDQLRAIAESDGMVGLNFAVAFLRADGRKLSDVPVETM
LRHLDHMMGILGEDGVGLGSDYDGAIVPEALTTVADLPVLRQAMADHGYGAVLIDKLCRDNWLRVLERTW
GG
>gi|56696427|ref|YP_166784.1| peptide/opine/nickel uptake ABC transporter periplasmic substrate-binding protein [Ruegeria pomeroyi DSS-3]
MNALNRLLSSAVLGAAVLMTAPAPMAMAETPPNMLVIAHRIDDITTLDPAESFEFAGSDLSRNVYMRLVN
FDPMDLKAGYQPEIAESWTVSEDKRSITFTIREGLKFHSGNPVRAEDVEFSLQRAVILNKTPAFILTQFG
FTAENAAETIKAEGNTVTITTDKPYATSFVLNCLTAVIGGIVDKEVVMANEQDGDMGNTWLKTNTAGSGA
YKLVSWKPNESITIQSNPDYYRGAPAMERVIVRHVQESASQRLLLERGDIDIARNLNPEDIAGARNAEGV
KIDEELKGRLMYVSLSQKHPELSKPQVRQAFKYLVDYEGMKNSFLSGQYTIHQNFLPQTYLGASDAAPFT
YDVEKAKALLAEAGIPEGMEIEVGVREAQERIEIAQSLQNALGQVGIKMNITIGTAKQILSRYRARELDV
YLGAWGPDYPDPHTNAGTFAYNPDNSDAAQATGLLAWRNSWDTGGLTAKTDAAVVENDRDMRAKMYEEIQ
AEFRETSPFVIMFQQIEQSAQRDNVMNFSTGQAITSASYWQVTK
>gi|56696428|ref|YP_166785.1| peptide/opine/nickel uptake ABC transporter permease [Ruegeria pomeroyi DSS-3]
MALSENNRERRVRASLSPWLKGVLVALGSVSITMLGLLLITFIIGRVMPIDPVLAIVGERASQSTYDAVY
EQLGLDKPLLVQFLYYLWDVLHGDFGMSLLNARPVSEDIARVFPATLELATLGTLIGVLLGVPLGVIAAV
RRGSWIDQIARVVALVGYSMPIFWLGLMGLLIFYGVLGWVGGPGRLDIFYQDIVPTRTGMILIDSAIASE
WGVFRNAFSHIILPATLLGYYSLAYISRMTRSFMLEQMSAEYITTARVKGMSERQVIWGHAFRNIRVQLI
TVIALSYANLLEGSVLTEIIFSWPGIGSYITTALLSADMNAVLGGTVVVGLIFICLNLFSDLLYRVFDPR
SK
>gi|56696429|ref|YP_166786.1| peptide/opine/nickel uptake ABC transporter permease [Ruegeria pomeroyi DSS-3]
MSETLTLRQWLLTDEPTSRRHARLASLYKGWLTLRGNTMAMFGLGILVALVLMALFAPLIAPHDPYVQNL
GNRLQPLGSPGHPFGTDSLGRDILSRLIYGSRITLYIVTLVALIAPVAGLLVGTVAGYVGGWADVVLMRI
TDIFLAFPRLVLALAFVAALGAGIENAVLAISLTAWPPYARMARAETLTIRASDYISAVRLQGASPVRII
TRHIWPLCISSLIVRVTLDMAGIILAAAGLGFLGLGAQPPSPEWGAMISEGRRFILDHWWVATMPGLAIF
TVSLAFNLLGDGLRDVLDPKEGSQ
>gi|56696430|ref|YP_166787.1| peptide/opine/nickel uptake ABC transporter ATP-binding protein [Ruegeria pomeroyi DSS-3]
MNLLEVENLWVKFPTRQGVVEAVRGISFSLGRERLGIVGESGSGKSMTGRAILRLIRPPGMIEADRIALE
GQNLLDLSEKDMRAVRGERISMVMQDPKFSLNPVMRVGDQIMEAYLLHNKVGKAEARKRSLEMLEAVSIR
DPERVMRAYPHEVSGGMGQRIMIAMMLIPNPQILIADEPTSALDVSVQRQVLNIMDDLVKQRGMGLIFIS
HDLNLVSEFCDRVLIMYAGRIVEVCDADKLHQATHPYTRGLLNSLPRLDQPRAKLEVLSRDPAWSDAPSV
GGRA
>gi|56696431|ref|YP_166788.1| peptide/opine/nickel uptake ABC transporter ATP-binding protein [Ruegeria pomeroyi DSS-3]
MNMIEIEGLNVWFGHGIDRVDAVRGASFSVARGESFGLVGESGSGKSTILRAITGLAPDWSGRVTIDGQA
LAGGKRDRAFFRKVQMVFQDPYASLHPRHSVDQVLSETLHLHGIPDIDTRVRSLLDDVGLGGRFRFRYPH
QLSGGQRQRVAIARALAGEPEILLLDEPTSALDVSVQAEILNLLTDLREEHNLTYLMVSHDLSVIGHMCD
RLAVMKDGEIVEVMDVAALRDMRAEHAYTRDLLAASVAPGVRTA
>gi|56696432|ref|YP_166789.1| glycine betaine/proline ABC transporter, periplasmic substrate-binding protein [Ruegeria pomeroyi DSS-3]
MRLFREIAANDPGPTGRMKNMKTFTTALATGVLALCPLAALADSSDPIVIPIHNWSSQIVMSNVVGQIFE
EMGVAVEFVTTDSQAVYESVRLGDVTLELEVWEGAFGASFRAALEKGGIVDVGDHDAVTREDWWYPMWTK
DACPGLPDWKALNDCAAVFATAETGDKGRYLDGPVDWLKHGKERVEALGMNFEVINAGSAAALWAEIGAA
EADKRPVVVFNWTPNFAEAVWPGEFVEFPEWVDGCDKDPAVGPNPDALYDCGNPATGYLKKAAWEGMEAK
WPDAYAVLTRISFTNPQIAEMAKLVDVDEMEPDEAAEAWLEANEDVWRPWLDG
>gi|56696433|ref|YP_166790.1| glycine betaine/proline ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MRFMGSPVISARNVWKIFGKDPVGYLKTLQPGRSFDDIRADGYIAGVRDVSLDVARGEMLVIMGLSGSGK
STLVRCFSRLHEITGGSIEVDGQIIGDLSEKDLIELRRNKMGMVFQSFGLLPHRTVLDNVAFPLEMRGQD
RHTRRKRALEVIELVGLAGREDYFPRELSGGQQQRVGIARSLAIEPDIWFLDEPFSALDPLIRREMQDEF
LRLQAMLGKTIVFITHDFDEALRLADRIAIMKDGAVEQCDTPDQIVMNPTTGYVAKFTEEIDKARVVHAG
VLARAGVVGEGQPVEAGATVQQLARLLVNDSRDLIPVADKGQVIGALDRQGALDILLKAS
>gi|56696434|ref|YP_166791.1| glycine betaine/proline ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MSVTTTETTGTAPALPRKTLGLAMIGLAVMMTLLHYAGLLPAWLHRLPEAIIPPFATWLDAIFNFVKDDL
GLLALTRLLTDGLEVVLDATANLLFGKRRWPNIGPIPWSAIAAMTAVVGYYLGGWRMALLAGGTFVWTAM
IGQWDIAMQTMSVLVVAAPLAFAIGLVLGISAWKSPSFDAVLRPVLAVLQTLPFFTYLLPAVIFFKVGPT
AGAVATTVYAIPPMILMTTLGLQKVSPEVVEAGKMSGCTRWQMLRHVYIPAARTEILVGVNQVIMLCLAM
VVLTAFIGMPGLGAKLLAMMGSFKIGRSFEIGVTIVLLAVTLDRMSKAWVVKLPEHFERGTPFWIRHKFL
LMAIGAFVGFTLIAQVVPILSEVGRKQSWSQGKEIDTLIKGFLAIDAVQAITNSIRYVLNIWVLNPLRDF
MLSIPTVAFVLFISAAALLVAGRREAVLAAAFFGLVALTGWWDRSVITLYSVLAAVSIALLLGVPIGVVA
ARKEKTANAVLLACDTAQTFPSFIYLIPAIMLFGITATSVVMSILIFSMVPLVRYTIEGLRNVPDEMTEA
ADMAGATRMQKLWNVQLPLALPTMAVGFNQAIMFAFFMVIIAAFIGTQDLGQELQRTLAGTDLGKNFVLG
ICVTLMALTFDMVIMKWADDKKARLGLN
>gi|56696435|ref|YP_166792.1| flavin-containing monooxygenase [Ruegeria pomeroyi DSS-3]
MTTSKRVAIIGAGPSGLAQLRAFQSAAAKGEEIPEIVCFEKQDNWGGLWNYTWRTGLDENGEPVHCSMYR
YLWSNGPKEGLEFADYSFEEHFGKQIASYPPRAVLFDYIEGRVLKANVRDWIRFSTAVRWIDYNDETGLF
KVTVHDHTNDRVYSEEFDHVICASGHFSTPNVPHYEGFETFNGRLVHAHDFRDAREFAGKDILVVGSSYS
AEDIGSQCWKYGAKSITSCYRSAPMGFKWPDNWEEKPALVKVDKNTVFFSDGTSREVDAIILCTGYKHFF
NFLPDDLRLKTANRLATADLYKGVVYVHNPKMFYLGMQDQWFTFNMFDAQAWWVRDAIMGKIDLSNVTKE
QMLADVTERETREEASDDVKYAIRYQADYVKELVAETDYPSFDIDGACEAFFQWKKHKGEDIMAFRNNSY
TSVITGTLAPVHHTPWKDALDDSMEAYLRN
>gi|56696436|ref|YP_166793.1| ABC transporter, periplasmic substrate-binding protein, putative [Ruegeria pomeroyi DSS-3]
MTLPGGVVEIGMLSSSFAHRMAVTSLFPQDRVGMSDPIKIGFLAPLTGPVSSWGLPGLHGCRLWEDWLNR
AGGILVGGRRYPVSIVPFDCGYDPERAMEGARHLVHTEQVKLLMMLGGDTFTPLRGFLTANKVLTSTLLP
SDLSPDTRYLIAPSEVHPIYNVTGVDWLARNRPELRRVAMCSQKDALGLPSIATYRAAFEAAGVPVVKEV
EYDPEMTDVATIVQPMLDAQPDVLCWCTSYTPMVHAMTEYAHAKGFSGQILSCTLDNYQRLVARTSAEFM
EGALFQFPDFDDPKLARKAFFFNRPSTFFKEYNARYPGNWSAVSWEYVAILDIWHAAVEKVASVHPVSVL
ATMKQMDPVTHAFGPARWWGESIFGIDHALVGDWPVVRIQEGKARIVEFGSIPAWLDKHEDMLRRHMQAA
GQMWQQRLETGEAQTGLTTRDLVD
>gi|56696437|ref|YP_166794.1| GntR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MNQTLKAEMPIGQSIGETVRIVADTLFARISSGEYPPDSRLPSERALAAELGVSRNTVREALDVLESRDM
IRRRQGSGSFVTYQLDSKDTPAPGSVGERTSPLDHLIVRSIIEPEMIRLAVMNMTPKELDELAQTVARIE
SVRADQAEFTRCEEDFYRRIARSTRNPLLESCYELTIEVCRQSFRTALMRKHLTPDRIQNYQTRFNSLFN
AIATRDVEAAVEITKLHLVEEQKLFLHEG
>gi|56696438|ref|YP_166795.1| ammonium transporter family protein [Ruegeria pomeroyi DSS-3]
MIIRRPEQGRARCCHPKSDRNHLNLRKIGSFWLFGRQANKRNKIRRGKNISLGLKRCLKSANFGPSSPHR
LSDRQSGLNWPTRRWHWSPDWSPETPATPGKARPEPTENQEGNKMSLDISAIHAEQVTLNSLVQNLLYAS
GTVGAILVVVGLLLIDAGTARRKNLFNSTIEKTLGFFLGFATYYVIGFGIWASQYYIMVDATMTDSIKDW
WLGGGMTNSLAHHVDPALFPGLNTFQIFVFFLAVFAGIINILLHFSVSERMKASAYYITCVVAAVVSSVL
SWATWGSVGPLTNAGFHDFFGVGFVYLFPAGMALVFTPKLGARPGMMEPHARVSAYLAPSIGLCAPGLLL
IFGGLPMVIMSCLFFFDPEALAVSVTMADTSVGIALNNYALVWAGGAVTGLILAYRSGNYAYTLLGPLAG
YVAGASGFDVYLPWQAFLIGLAAPFIAYAVYEFTLKRGIDEHKLFPLFLGCGTFGMIVLGVFKAGTPRGG
YLGFEEGAYAFQHGQISLGMQLVGIAVCIGAGVVTALILSVILEKTVGLRVDEHDQIDGLDKKIWDLEPD
VHTHADSVPRA
>gi|56696439|ref|YP_166796.1| formate dehydrogenase, beta subunit [Ruegeria pomeroyi DSS-3]
MSLDDAGVWKSGRGRGRRLPKGRVYSDEALAAVRGVLGDRPRRRDLLIEFLHLIQDACGHLSADHLAALA
FEMKLGQAEVYETATFYAHFDVVKEGETPPPALTIRVCDSLSCELAGAEQLRAALEEGLDPGQVRVLRAP
CMGRCDTAPVLELGHNHIDHATPEKVRAAIAAGDTHAHLPAYETFDAYAAAGGYAVLKGLRAGGDWEAVQ
DSVLAAGLRGLGGAGFPSGRKWGFVRANPGPRYLAVNGDEGEPGTFKDRYYLERVPHLFLEGMLIAAWAV
EAETCYIYMRDEYPAVLEILRREIAALEAAGIVAKGYIDLRRGAGAYICGEESAMIESIEGKRGLPRHRP
PFVAQVGLFGRPTLVHNIETLHWVARVCREGPEVLNSVEKNGRKGLRSYSVSGRVARPGVHLLPAGSTIR
DVIAAAGGMAAGHVFKAYQPGGPSSGLLPASMDDIPLDFDTLQPHGSFIGSAAVVVLSQQDSARDAALNM
LRFFEDESCGQCTPCRAGCEKAVKLMQAEHWDQPLLEELCQVMADASICGLGQAAPNPIRLTMKHFAEEI
>gi|56696440|ref|YP_166797.1| formate dehydrogenase, alpha subunit [Ruegeria pomeroyi DSS-3]
MADGAHVEMVSFTLNGEEVTVPEGLTIWEAAHGRGLVIPHLCHKPDPGYRPDGNCRACMVEVAGERTLVA
SCIRPVAAGMVVTTDSARAEGARKMVVELLLADQPEVAHDASSHFHAMAGLNGVSESRFPARDAAHVPLL
DASHVAMRVNLDACINCNLCVRACREVQVNDVIGMAGRGAGAQVVFDQNDPMGASTCVACGECVQACPTG
ALMPATVLDAEQAGDSKDYDREVTSVCPFCGVGCQLSFKVKDNKIKYVTGVDGPANESRLCVKGRFGFDY
IDHPHRLTKPLIRRADAPKGLNVDPGNPLSHFREASWEEALDFAARGLADLRAQKGSYVAGFGSAKCSNE
EAYLFQKLIRQGFGHNNVDHCTRLCHASSVSALLENVGSGAVTATFNEIENADVAIVIGCNPIENHPVAA
TYFKQFTKRGGKLIVCDPRGVGMGRFATHRLQFKPGADVSMLNAMMHVIVEEGLYDQAYIDQFTENWEEM
KAHLADYSPEKMEPICGIAAGELRDAARTFAAGKAGMIFWGMGVSQHIHGTDNSRCLISLALMTGNVGKP
GAGLHPLRGQNNVQGASDAGLIPMFLPDYQSVTDDGVRSAFTSVWNSGDFSNQKGLTVVEIMHAIHDGDI
RGMYILGENPAMSDPDVDHARAALAMLEHLVVQDIFLTETANYADVILPASAWAEKTGTVTNTNRQVQMG
RPAVAPPGQAKEDWWIEVELARRLGLDWNYSHPSEVFAEMKRNMKSLDNITWARLEGEAVTYPSLSPEDP
GQAIVFGDGFPRANKRARFTPAKIVEPDERPDADYPFVLITGRQLEHWHTGSMTRRASVLDAVEPEANCS
MHPATLRAMGIEPGDMIRLTTRRGSVQVMVRADRAIAQDNVFLPFAYVEAAANILTNAALDPYGKIPEFK
YAAVKVERTDTAASAV
>gi|56696441|ref|YP_166798.1| formate--tetrahydrofolate ligase [Ruegeria pomeroyi DSS-3]
MAYKSDIEIAREARKLPILEIGAKLGIAADELLPYGHDKAKVSQGFIDSVQDRADGRLILVTAINPTPAG
EGKTTTTVGLGDGLNRIGKNAMICIREASLGPNFGMKGGAAGGGYAQIVPMEEMNLHFTGDFHAITSAHS
LLSAMIDNHIYWGNEADIDTRRVVWRRVVDMNDRALRQITCSLGGVSNGFPREAGFDITVASEVMAILCL
ARDLKDLEKRLGDIIVAYRRDKSPVYCRDIKAEGAMTVLLKDAMQPNLVQTLENNPAFVHGGPFANIAHG
CNSVIATKTALKVADYVVTEAGFGADLGAEKFMNIKCRKAGIAPSAVVLVATVRAMKMNGGVAKGDLGAE
NVAAVNKGCANLGRHIENVKSFGVPVVVAINHFVTDTDAEVQAVRDYCANHGVEAVLSRHWELGSEGSEA
LARKVVELAESGKANFAPIYPDDMSLFEKIETIAKRIYRADEVLADAKIRNQLKEWEEAGYRNLPVCMAK
TQYSFTTDPNRRGAPTGHSVPVREVRLSAGAGFIVVVCGEIMTMPGLPRKPAAETIRLNDAGQIEGLF
>gi|56696442|ref|YP_166799.1| chorismate mutase family protein [Ruegeria pomeroyi DSS-3]
MSTSIPPQDCTDMTSLRAQIDRLDRELISLLAARAGYIDRAVELKQGNGWPARIPERVEEVVMNARAAAE
GQGLDPGLIEDLWRQLVDWSIAREARVIREV
>gi|56696443|ref|YP_166800.1| folD bifunctional protein [Ruegeria pomeroyi DSS-3]
MAATVIDGKAFAARIRGQVAEHVAELKAGHGITPGLAVVLVGEDPASQVYVRSKGKQTVEVGMNSYEHKL
DADTSEADLLALIDRLNGDPDVHGILVQLPLPGHLDEDLVINAIDPAKDVDGFHISNVGLLGTGQKSMVP
CTPLGCLMMLRDHHGSLSGMDAVVIGRSNIVGKPMAQLLLGDSCTVTIAHSRTKDLADVVRRADIVVAAV
GRPEMVPGDWIKPGATVIDVGINRIERDGKTRLVGDVHYDSCAQVAGAITPVPGGVGPMTIACLLANTLT
ACTRANKLTEPDGLTP
>gi|56696444|ref|YP_166801.1| folD bifunctional protein [Ruegeria pomeroyi DSS-3]
MSTVADTRLLPGKPVRARILSEVSAYVNQVGRIGKLVSISIGNVPEVAVYVRNQARAASAVGVPFDQQLW
DRSISQEVCQSLIREMNDDPDVLGIILQRPVPDHINVRALQAAIHPLKDVEGMNPASIGNIVYNDVAMAP
CTAAAAIELIRETGLSMAGLEVVMVGHSEIVGKPVAMMLMAEGATVTVCHHMTRSDAMHSRRADVVVVAV
GKAHLIGPDMIKPGAVVIDIGINHVPGPDGPVVVGDVQTDAVKDVAGWITPVPGGVGLVTVAILLRNAIR
AHQQQRAAGWIH
>gi|56696445|ref|YP_166802.1| hypothetical protein SPO1561 [Ruegeria pomeroyi DSS-3]
MSALGLGLIAALCWGLHDITIRYLSRTVPLMGALAVVLATGLGFQATVLAATEGARLPQGPALWLSIGSG
LAFLVASLGLYFAFERGPVRLVAPIIGAYPILSLLFAFLAGAPIGADQVLAVLVIVGAVGVVAGLSDDSG
DPAPPKGPTIALSMIAAIGFAATFKLGQMAATLDGELNATLLARVTALVLLLALIVIRRQTLRVGAAALL
PLVVMGLLDGVALLAVISAGVLDHPQLAAVASSMFGLITIVLAWAFLRESMSRPQWVGCLAAFLAIGYLA
W
>gi|56696446|ref|YP_166803.1| glycine cleavage system T protein, putative [Ruegeria pomeroyi DSS-3]
MTKQTGFHDRFARFTENFIEYNGFWLANCMSTAGPIEEYHACREKCVVLDLSALRKFEITGPDSEALCQY
IFTRNMKTLPVGGVVYTAMCYPHGGMIDDGTVFRLGKDNFRWIGGSDYGGEWIREKAAELGLKVLVRSST
DMQHNIAVQGPESRELLKKVIWTAPHQPKFEELGWFRFAPARIGDDQGVPVVVSRTGYTGELGYEIFCHP
KHAGAVFDAVWEAGQAHGIRPMGLEALDMVRIEAGLIFAGYDFSDQTDPFEAGIGFTVPLKSKPDDFIGR
EALIRRKEHPARVLVGLDIDSNVDVGHGDCVHIGRAQIGEVTSSMRSPILGKNIALARVDVAHHEVGTRV
EIGKLDGHQKRLPATIVPFAHYDPQKTRPRS
>gi|56696447|ref|YP_166804.1| hypothetical protein SPO1563 [Ruegeria pomeroyi DSS-3]
MTSALTSIGGEDALRDLVETFYDRMETDPEAWPLHRLHFRGHGLNHTRQAQFEFLSGFLGGRAYYRERFG
HMNLREIHAHVPIREADAELWLKTFDAALAECGLRGEVVDKFRATLRRAALMLVNDVPDWREESDGKARA
AAGCPADGAA
>gi|56696448|ref|YP_166805.1| MOFRL domain-containing protein [Ruegeria pomeroyi DSS-3]
MPATDTTSLRTAAVRAFRAAVRRADPGLALTDCLRRTGLPRPNGDGKTIVLALGKAAPAMIRALHGQITG
PRVMLCVTHRENQEPVAGAEVFRAGHPVPDEIGHHAARRVREILAETTARDVVLALISGGGSALLPAPPD
GVTLDHKQALNRLLLQSGLDINAVNAVRQHVSVLKGGGLLRHAAPAPVTAYILSDVIGDDLRAIASGPTV
APIASRAEIRDLLERKGIADALPDSIRRHLRQPESAHPLPKAGNHLIGGNRESLAAAAAALTVFGEVQVI
DEPLVGDVGEAAETVAAALARAAQEEGPQVLIWGGETTVRVRGSGIGGRNQELALRLAALMEDTPLSRPW
LFLSAGTDGRDGPTEAAGACVDAGTLPRIRAAGAAPETFLARNDSNSALTLSGDLLVTGATGTNVADVQI
LLLG
>gi|56696449|ref|YP_166806.1| citrate lyase, putative [Ruegeria pomeroyi DSS-3]
MSFHPIEQAPARLNRSELAVPGSQPQMFEKAAQSDVDVIFLDLEDAVAPDEKEQARKNIIKALNDLDWGT
KTMSVRINGLDTHYMYRDVVDVVEQAGERLDLIMIPKVGTAADVYAVDMMVTQIEDAKGYKKRIGFEHII
ETALGMQNVTEIAGASKRNESLHFGVADYAASTRARTTIIGGVNPDYSVLTDPLEDGSRAVHWGDMWHYA
LARMVVAARANGLRPIDGPFGDFQDPEGYRAAAKRAAVLGCEGKWAIHPSQIALANEVMSPSEAEVTKAR
RILEAMAEAEAAGKGAVSLDGRLIDYASIRQAEVLVEKARQIAGN
>gi|56696450|ref|YP_166807.1| LuxR family DNA-binding response regulator [Ruegeria pomeroyi DSS-3]
MPRIEIMLGDGNPLVLSAMSEVFERDPRFSLVATTATAEGFLGMAMRVPIQVGVIDWNLPALGAEKLTEV
LRAQERAPRVVIYGHDQDPGLPRRAMAVGAAAFVSRSAPIDKLVQTCLDVAEGKMVFPFLDVRELRADPI
STLSRKERLLLEALAEGLTNKQLAARLGISTNTVKFHLSNVFDKLSVKNRAQAIAFYYSAQAKG
>gi|56696451|ref|YP_166808.1| aminotransferase, putative [Ruegeria pomeroyi DSS-3]
MSADTLFPKLDIPATIAAGPGPGNTDARVLAAFSGAGLADHMHGDVLRGMVECKLMLRRIWGTDNIHTFG
VAGTGWSGLDVMFSAVMPGDKVVVFTNGTFSGIDGLTVRMKAATAEELAANPLDPRPASVVIVDIPHGQS
VTGEIVETALAEHKPKWAAMAHWETGSGRINDIAGFSAACERHDVMGLVDAVSSLGVEDFRIDDFPGVHG
WASCPQKGICCLPLTYAPVSFTDRYIQTLRATGTRSFVHHPILEARHWGVIEGKDVDKGTYHRTHSAYAV
AAFHEALRITLQQGVANRAKDYAYHEAALRRAVEALGCEVTSNMTSLVVLNLPGDLRGREMELVQNCRAR
NFGIWPTLSAPVQVRIGILNLLSRAAVTDIVTRFAEAIRELGGAGDEATALAALDAHYDNAIAAE
>gi|56696452|ref|YP_166809.1| malate--CoA ligase subunit beta [Ruegeria pomeroyi DSS-3]
MDIHEYQAKEILANFGVDIPPGALAYSPEQAAYRAREIGGDRWVVKAQVHAGGRGKAGGVKVCSSDAEIQ
ETCENLFGRKLVTHQTGPEGKGIYRVYVEGAVPIEREIYLGFVLDRSSQRVMIVASAEGGMEIEEISAEK
PDSIVRATVEPAVGLQDFQCRQIAFKLGIDPALTARMVRTLQGCYQAFSEYDATMVEINPLVITGDNRIL
ALDAKMTFDDNALFRHPHISELRDKSQEDPRESRAADRGLSYVGLDGNIGCIVNGAGLAMATMDTIKLAG
GEPANFLDIGGGATPERVAKAFRLVMSDSNVQAVLVNIFAGINRCDWVAEGVVQALKEVQVEVPVIVRLA
GTNVEEGQKILAKSGLPIIRARTLMEAAERAVGAWQNDLSENTIVRAVQ
>gi|56696453|ref|YP_166810.1| succinyl-CoA synthetase subunit alpha [Ruegeria pomeroyi DSS-3]
MSIFIDRETPVIVQGITGKMARFHTADMIAYGTNVVGGVVPGKGGQTVEGVPVFDTVEEAVERTGAEASL
VFVPPPFAADSIMEAADAGIRYCVCITDGIPAQDMIRVKRYMYRYPRERRMVLTGPNCAGTISPGKALLG
IMPGHIYLPGPVGIIGRSGTLGYEAAAQLKEHGIGVSTSVGIGGDPINGSSFKDILHRFEQDDETHVICM
IGEIGGPQEAEAAAYIRDHVSKPVIAYVAGLTAPKGRTMGHAGAIISAFGESASEKVEILTAAGVTVAPN
PAVIGDTIARVMREAA
>gi|56696454|ref|YP_166811.1| 2-hydroxyacid dehydrogenase [Ruegeria pomeroyi DSS-3]
MNMPVIMNSKPRVLVTRRWPAAVEAQLAERFDTQFNRTDTPLTSAEFRSALARFDAILPTVTDKLGAEAL
DVTAPQTRLLANYGVGYSHIDSDAVRAHGITVSNTPDVLSECTADIAMTLMLMVARRAGEGERELRAGQW
TGWRPTHLVGSKVSGKVLGIVGFGRIGQAMAQRAHHGFGMKILVQNRSAVPQDVLDRYGATQVETLDAML
PQCDFVSLHCPGGAANRHLINSRRLDLMKPDAFLINTARGEVVDEHALAQALMFDCIGGAALDVFDGEPR
IAPVLLDCDNLVMLPHLGSATRETREAMGMRVLDNLVDYFEGRDPRDKVL
>gi|56696455|ref|YP_166812.1| phosphoenolpyruvate carboxylase [Ruegeria pomeroyi DSS-3]
MPAAAETAPSADATVYAAEVHARLRLAWLRVLRRRAPVVARAIEGGAEFWDAAAYAEHLQAATIWFHLQQ
IMDENLAIREARQAERSGAARDVPGSFARALADADPDARREMRRLLAEAKLSVGPTITAHPTEAKRVSVM
EIHRRIYRHLVQFESRRWSPQEETRLEQRLEMEIDLLWLTGELRMERPSLAAEIDWGLQFYRTSLIAAVP
RLYERYRSAVEAEFGPGFPGTACLKFHSWIGGDRDGNPNVTAQVTRLALERSRDMMRGVYVTALDEIVQR
LSLSDRLVPVPPAERAALERIVTRRADDPAACAQRNPNELFRQAAAAIAQSVEGSRYAHVADFIADLETL
DRGLQAIDAGLLADLLVRPLIWQVNVFGFRAHTLDIRQNSEVVTRALHDLWQVTGEAPEPLSPAWSARLR
AELGKPDLPYVNRARLGPEAAELMALLELMREIRTGADPQAIGPFILSMTRSADDLLAVYLLARYAGFGA
ERLPLKVVPLFETIEDLRAAPAILRDVLEVPVAARSLRDGSGQIEIMLGYSDSNKDGGFLCSTWSLDRAQ
RAITRALARSGLKPVFFHGRGGSVSRGGAPTERAIAAQPRGTLNGTLRLTEQGEVVTAKYANTGTAAAQL
ELLASSVLRHSAQPAFEAVDPEAEDVMETLSSLSQTRYQTLLQHPAFLDYFNQASPVNELALLRIGSRPA
RRFGAQSLADLRAIPWVFAWSQNRHMISSWYGFGSAVEDFCTVRGERGRAQLRRLFERVPLFRLIVDEVE
KSLVLARLDIAEGYAALVSDRAGAEAIFARIGAEHGCSRQAIEMLTGQGNGVRFPNFLGRVARNDATLRA
AHAAQIGLLGALRADPGQDRRIRLMQTMNCISAGLGWTG
>gi|56696456|ref|YP_166813.1| serine hydroxymethyltransferase [Ruegeria pomeroyi DSS-3]
MNASHQDTGFFTEALSERDPELFGAITSELGRQRDEIELIASENIVSAAVMQAQGSVMTNKYAEGYPGRR
YYGGCQYVDIAENLAIERAKQLFGCGFANVQPNSGSQANQGVFQALIKPGDTILGMSLDAGGHLTHGAAP
NQSGKWFNAVQYGVRQQDNLLDYDQVEALAKEHRPKLIIAGGSAIPRQIDFARMREIADMVGAYLHVDMA
HFAGLVAAGEHPSPFPHAHVATTTTHKTLRGPRGGMILTNDEDIAKKVNSAIFPGIQGGPLMHVIAAKAV
AFGEALRPEFKTYIQQVIANAQALSDQLIKGGLDTVTHGTDTHVVLVDLRPKGVKGNATEKALGRAHITC
NKNGVPFDPEKPTVTSGIRLGSPAGTTRGFAETEFRQIADWIIEVVDGLAANGEDANEAVEDKVKAQVAA
LCAKFPIYPNL
>gi|56696457|ref|YP_166814.1| glutamine synthetase III [Ruegeria pomeroyi DSS-3]
MTIDLAKFAKDKGVKYFMISFTDLFGGQRAKLVPAQAIADMQEDGAGFAGFATWLDMTPAHPDMLAVPDP
SSVIQLPWKPEVAWVAGNCVMEGADVAQAPRNVLRRLIAEAAAEGMHVKTGIEAEFFLLTPEGDQISDPF
DTAAKPCYDQQAVMRRYDVVREICDYMLELGWGPYQNDHEDANGQFEMNWEFDDALSTADKHSFFKFMTK
SVAEKHGFRATFMPKPIEGLTGNGCHAHISVWDAPGAASKVNVFAGAGDGPTGEVGLSERGKHFLGGIMK
HASALAAITNPTVNSYKRINAPRTMSGATWAPNTVTWTGNNRTHMVRVPGPGRFELRLPDGAVNPYLLQA
VIIAAGLSGIHSKADPGKRWDIDMYAEGHKVRGAPKLPLNMLDAIREFDRDKELKKSMGDEFSASYIKMK
MQEWNSFVTHFSRWEKENTLDI
>gi|56696458|ref|YP_166815.1| glutamate synthase family protein [Ruegeria pomeroyi DSS-3]
MTVKDNKENAPPRTVPIQSATFSNPINAEIRRAAATGIYDIRGGGAKRRVPHFDDLLFLGASISRYPLEG
YRERCDTRVTLGTRFAKKPIELDIPITIAGMSFGALSGPAKEALGRGASEAGTSTTTGDGGMTPEERGHS
TKLVYQYLPSRYGMNPDDLRKADAIEVVVGQGAKPGGGGMLLGQKISDRVAEMRNLPKGIDQRSACRHPD
WTGPDDLEIKILELREITAWEKPIYVKVGGTRPYYDTALAVKAGADVVVLDGMQGGTAATQDVFIEHVGL
PTLACIRPAVQALQDLGVHREVQLIVSGGIRTGADVAKAMALGADAVAIGTAALIALGDNDPKWEAEYQK
LGTTTGAYDDWHEGLDPAGITTQDPVLQARLDPVDAGRRLRNYLNVMTLEAQTIARACGHNNLHNLEPED
LCALTMEAAAMARVPLAGTEWWPGKTGAGF
>gi|56696459|ref|YP_166816.1| FwdC/FmdC family protein [Ruegeria pomeroyi DSS-3]
MQTYDLAADGLRGLNATLQAQSDETNQTEWTIVNPRGSHAIAVGLDAPIEVKVMGSTGYYCAGMNKQATV
HVHGSAGPGVAENMMSGTVVIDGDASQYAGATGHGGTLVIKGNASSRCGISMKGIDIVVHGNVGHMSAFM
AQSGNLVVCGDAGDALGDSIYEARLFVRGSVKSLGADCIEKEMRPEHIELLRDLLARGGCDAKPEEFKRY
GSARQLYNFKVDNAY
>gi|56696460|ref|YP_166817.1| glutamine amidotransferase, class II [Ruegeria pomeroyi DSS-3]
MCGIVGLFLKDKSLESQLGVLLTDMLITMTDRGPDSAGIAIYGEPSPTVSKVTVQSENPDRDFADLAEKV
QPMVGGPVSLSRRDTHAVLSVPHGTAEALRRQLREVAPDVRVMSFGDSLEIYKEVGLPRDVAARFDIASM
TGTHGIGHTRMATESAVTTLGAHPFNTGSDQCLVHNGSLSNHNSLRRKLRREGIHIETLNDTEVAAAYLT
WKMQTGATLGEALEKSLEDLDGFFNFVVGTRDGFGVVRDPIACKPAVMAETDQYVAFGSEYRALVNLPGI
EQARVWEPEPATVYFWTHGDTATPTGKAA
>gi|56696461|ref|YP_166818.1| hypothetical protein SPO1577 [Ruegeria pomeroyi DSS-3]
MSTIGYESWAVDLAEVGAIYPFQGWEVAMTVIGVLFWIGWHRIQFVRENAHLENAKKRALDHERIQKSVE
RY
>gi|56696462|ref|YP_166819.1| ammonium transporter family protein [Ruegeria pomeroyi DSS-3]
MDGNLNALTTVFTEFYYWVTVVFMFLIHVGFCMYEVGASRRRNHMHTLMKNVMVIPLVTVTFFFFGWWIY
WAFPMFPFFGGLNTEAGAANLPWAETMGPNAADRITGVFWAAFLLFSWTAASIVSGAVIERIRSSALWVH
AVLIGSVWWIIDAAWGWHYGGWMVQYLGYHDAYASGVIHAIAGGYALGVIMVLGPRIGKFAPDGTPRDIP
PHNPWMLTIGIFLIYTGFWGFYAACNVPAISPEAIGGQITGTTWTATNIYLAPTSLSGITFNFLMSLSGG
LMAAYVVSKGDAFWTFSGGLAGVITASAGNDLYHPIQAMIIAAIGVVIVYRLHYWVERRFKLDDAVGAVA
VHGYAGFIGLIIAGFVLWGAPSSPYEGYATINPVGQFIGALIMFFGLGFLPAFVVAKMQAAAGVLRIPEE
VELEGLDYAEHHAYEDAKEAIIEADKAYLASKVSPAE
>gi|56696463|ref|YP_166820.1| aminomethyl transferase family protein [Ruegeria pomeroyi DSS-3]
MAIIYRTSALAQRHAEIGGELEDWNGMGTAWFYDHTDERAKADYEAVRTKAGLMDVSGLKKIHLSGPHAA
AVIDRATTRNVDKLMPGRAVYACMLDDRGLFIDDCVIYRLSVNNWMLVHGTGTGHESLAMAAYGKNVSMI
FDDDLHDMSLQGPVAVDFLAKHVPGIRDLAYFGIIQTKLFGKPVMISRTGYTGERGYEIFCEGRHAIALW
DAILEDGKDMGIVPVQFSTLDLLRTESYLLFYPGDNSETYPFADDTCGDSLWELGLEFTVSPGKIGFRGA
ENHYARKGKERFKIYGVKLEGTTPADMGAPLLKDGEVVGVVTFGMNSDLNGHNVGIARMPVDCAVPGTKL
TVRNEDGTEIACVAEEMPFYDKDKSIRAAKG
>gi|56696464|ref|YP_166821.1| hypothetical protein SPO1580 [Ruegeria pomeroyi DSS-3]
MRSDQQGDSDGMSKFQFPPSIASRPVYGTLEPRPGKAHLMIADAEGAEALLDLAARDAALFATAHIIFIP
KGTGETYVERLRALGPAQFYVGPSYAASVQRIRRVLSDAHMGLQVYLAGTEGLMGQAQNEAMQAGIPHGA
IQTEHRGSVARRMQCVHCKGITEDVTTDPFVCSHCGLNLFVRDHYSRRLAAFQGVCIDAEDPGNVPEPVE
LYK
>gi|56696465|ref|YP_166822.1| oxidoreductase [Ruegeria pomeroyi DSS-3]
MSAAPQKAKAGAEKIEVTVSAVVPLNPLVTRFEFTRRDGQPFPPFSAGAHTVVEMRDGERTRLNPYSLMS
DPGDNSIYAISVRRDDQGRGGSLFLHNKVKVGDPMTITFPVNLFPLDLRGRKHVFLAGGIGITPFLAMIA
HLERMGGAWELHYSCRSRELGTYVDELTYKHPNKVHVYFDDQDQAIGLEDLLDGQPLGTHVYVCGPKGMI
DWVHATAAAHGWPDENVHSEEFLAPQPGKPFEVRLCKSDITIQVGEHESLLEAMERCGVDAPFLCRGGAC
GQCETDVVDSDGDFVHRDHWLDDDEHASGKKIMPCVSRFVGKTLVLDR
>gi|56696466|ref|YP_166823.1| hypothetical protein SPO1582 [Ruegeria pomeroyi DSS-3]
MTIQFNTETFRDDYSFRNSDWAIKRFPFPFHEDSYMYSVNMEQHRGGPAGSVYEKRFDVDEHYVSEMADR
AIVLADDPLRCQSLPHMTLAGWDTLELIMVCKSEDYPDLFELHRDGDRWRWINKPMGIDHTFTFLDETTL
PCGPLEYITRQAQGDYAVLDQRGDMLYMDAGMVTTQADWSLDFDIGMDFFEWHAPVPLAHEMGIFKRALK
FLLNVQQGAPARRLNWTMTVNPLLDTSPENYHKWGVQKTTLTPENIGAKQHLRVELQTFYRLPRSNALLF
PIRCYLIAFQDLVSVPKWGRRLHRVVRDLPEELATYKGFIANRPMMLDYLSRYDDGLPTSPGIWPDLDSE
PPLQT
>gi|56696467|ref|YP_166824.1| DNA-binding protein, putative [Ruegeria pomeroyi DSS-3]
MDAAKDLRMTQLLQDPHSVREEREKVLEVAIGREVRAFRKQQGITVAELSKLTDLSIGMLSKIENGNTSP
SLTTLQTLANALSVPLTAFFKGYEEKREAIHTKAGQGLEIERAGTRAGHQYSLLGHIGSNSSGVIVEPYL
ITLSTESDTFKTFQHDGIEMIYMLEGKVDYLHGSEIYPLEPGDTLFFDADAPHGPERLVELPTRYLSVIC
YPQQKKG
>gi|56696468|ref|YP_166825.1| AraC family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MTTRIGFLLFPGFPMACLTSIIEPLRAANEISMSDSFAWRLVSELPRKVVSSAGITFEPDASLETVSALD
YLVLLSAPVARFENPRTASLLRRIERHGTVLGAISGGVFPLVRSGVVRDERLSVHWCYEAAFAAEFPEIQ
RSNEVIEISPRLLTASGAAAAFDLALSLIEAALGANVANEVACWFQHPIMRKAGVKQALPIHQAADAEGE
MSPLVARAIEIFAENLTTPASIAAIAERLHITPRHLERCFKQATGQNPTGYFRHLRMQAARQIVMYTNDS
IAEVATAVGYANAKPLVRHYRDTFGLTPQQDRKRINLYRVEGNLPVPSV
>gi|56696469|ref|YP_166826.1| sarcosine oxidase gamma subunit family protein [Ruegeria pomeroyi DSS-3]
MHDLNPITPLGAADPVVEGHGPVTLREVTETALASVAARLGREAETTTLLTEVLGAAPPAPARLCPGTPG
AFWMGPDQWMIEAPLSTHEDLAAQLAARANGAASVTEQTDAWCRFDLTGERLADVFERLCPANTRAFAGG
EAVRSAIDHLGCFLLCRAPDHITVLGPRSAAGSLHHALVVAMRAAF
>gi|56696470|ref|YP_166827.1| sarcosine oxidase alpha subunit family protein [Ruegeria pomeroyi DSS-3]
MTGPNRLNGGLIDRSKPLNFTFDGRRYQGFAGDTLASALLANDVRLMGRSFKYHRPRGPMSAGSEEPNAI
VELREGARKEPNTRATTAELFDGLSANSQNRWPSLKWDVMAVNDRLSNFFAAGFYYKTFMWPAAFWEKVY
EPIIRKAAGLGTLSHAPDPDSYDKGFLHCDLLVIGAGPAGLAAALTAAQSGAQVILADEDFLPGGRLNAE
TFALGDQSGAAWAAETAAALQAMPNVRLMTRSTVIGAFDHGIYGVVERVSDHLPQPLPGKPRQILWRVYS
RRAILAAGATERPIVFENNDRPGIMLASALRSYANRWAATPARAVAVFTNNDDGHRTAQDLSAQGVSAVV
IDTRADAPETTGYETIPGATVTNTQGRLGLTTVEVTLATGTTRTLSVGGLGVSGGWNPNVHLTCHQRGRP
VWDQAIAAFVPGGTLPVGLTPAGAAQGVFSTHGALASGQAAAQQALSDLGITAKSAALPQAEDAPVNVTP
FWHVKGAKRAWVDQQNDVTAKDVKLAHQENFVSVEHLKRYTTLGMATDQGKTSNMAGLAIMAEVAGKSIP
EVGTTMFRPPYTPTAMGAFAGRSRDKDFRPTRKTPSHVWAEEQGAVFVEVGMWLRAQWFPRPGETHWRQS
VDREVTQTRKSVGICDVTTLGKIDVQGADAAEFLNKVYCNAFAKLAVGRTRYGLMLREDGIAMDDGTAAR
LAEDHFVVTTTTANAVPVYRHMEFVRQCLFPDMDVQLISTTEAWAQFAVAGPNARKLLQKIVDPAHDLSN
EGFPFMACAEITVCGGLRARLFRISFSGELAYEIAVPTRYGDALIRRMMQAGAEFDVVAYGTEALGVMRI
EKGHAAGNELNGTTTALNLGMGRMVSKKKDAIGSTLSEREGLNEADALKLVGFRPVNPQDKVPAGSHLMT
RGDPVDAAHDQGYVTSACYSPSLGCHIGIGFLKSGDSRKGEIVRLVSPLTGLDHEVEVVSAHFVDPEGER
LRA
>gi|56696471|ref|YP_166828.1| sarcosine oxidase delta subunit family protein [Ruegeria pomeroyi DSS-3]
MLIDHPILGPRDSSEFVYKGDAALIRRPDWQAPDALEQFIDYGYLRDNPAGVHRELWFHEQGDRSWLVVT
RDTTTHEIRSVELARDVARKEGRSR
>gi|56696472|ref|YP_166829.1| sarcosine oxidase beta subunit family protein [Ruegeria pomeroyi DSS-3]
MSYSGLRVIKEALTGHRGWGPAWRDAAPKAQYDYVIIGGGGHGLATAYYLAKEFRQARIAVLEKGWIGGG
NVGRNTTIIRSNYLLDGNEPFYEFSLKLWEGLEQELNYNAMVSQRGILNLIHSDAQRDAFIRRGNAMMLN
GADADLLSTEQIKARYPFLNVDNARFPIKGGLAQHRGGTVRHDAVAWGYARAADRHGVDIIQNCEVTGFR
IEHGTCTGVETSRGVIGAGKVAACVAGSSSRLMEKAGMRLPIESHVLQAFVSEGLKPLLPGVITFGAGHF
YCSQSDKGGLVFGGDIDGYNSYAQRGNLPVIEDVCEGGMAIFPMLGRARLLRSWGGIMDMSMDGSPIIDR
THIGGLYFNGGWCYGGFKATPASGFAYAHLLATDSPHKTATAYRFDRFARGRMIDEKGMGNQPNLH
>gi|56696473|ref|YP_166830.1| carboxymuconolactone decarboxylase family protein [Ruegeria pomeroyi DSS-3]
MSTFDEDLFLKGLEQRKATLGAEYVERNLAAADEFTRPFQEAMTAWCWGFGWGDDVIEPKTRSMMNLAMI
GALGKMHEWEIHCRGARTNGVSRDEIRAIIHVIGIYCGVPQALECFRVARRVLDSED
>gi|56696474|ref|YP_166831.1| Rieske (2Fe-2S) domain-containing protein [Ruegeria pomeroyi DSS-3]
MPEPVRSLAARYYTDPAIFAAEQAGLFARTWQFACHASQLENPGDYLAFDLGDESLFCIKGRDGVIRTFY
NVCQHRAHQLVSGAGSTRVVVCPYHAWTYELTGHLRAAPNAKSVPGFDAAQICLSEIRTEVFLGFVFVNL
DPEAQPMDHWFPNVRAELEAFVPNWSDLKPLEWVEIPEDCNWKVSVENYSECYHCSLNHPTFSTGVIRPE
TYDIQPQGYCLRHTTECNDLGQMSYDIDSGFPNNDRYSSWFLWPMFSFQVYPGNLLNTYHWRAVDAGRVV
VWRGWYSVGGAENETVRRMAVQDRATTVEEDIRLVESVQRGLRSRGYVPGPLVVDPGCGVNSEHSILHLQ
KWMREAVAAEPMS
>gi|56696475|ref|YP_166832.1| SIS domain-containing protein [Ruegeria pomeroyi DSS-3]
MNDTNVSSRVLRQLTEEWDTLTPEAQKAARYVLENPQDVGVSTVREIAEAANVKPNTFVRMARQVGFDGY
EDFRAPFREAIRQGGVSFPERARWLQEIRKSGDLGGLYADMAEAAMRNVEETFAGIGAERLKTAAEAIWA
SRQVFTLGVGVNNANARNFTYLASTGMTDFHAIPRPGSTAVDDLAWADQRDVLIAMTCRPYRAEVVEAVR
LARDQELTVIALSDSPASPIIRAAQHGFVVAVDTPQFFPSSVSTIALLETLLSFVIAVASDEIVTRVETF
HQRRHQLGLYTEEPE
>gi|56696476|ref|YP_166833.1| aminomethyl transferase family protein [Ruegeria pomeroyi DSS-3]
MSRNDLPAHARVVIVGGGVMGVGLAYHLAHEGWGGDTVLLEKAELTSGSTWHAAGQITHSTSSFGLGKCV
DYNIGLYSGKLEAETGQAVTWHGCGSFRLAYTEDEMDWLRHTLSVGRSLGFNIELVGPKRIAELHPFYNL
DGVLGALHTPDDGHVDPTNVTMAMAAGARAKGVRIFRHTCATNITQGANGEWVVETGKGTITCEHVVNAG
GTYARQMGEWSGLQLPMTSMTHHYFVTEPVPEFQSLDRELPVIRDDRKVSGYIRMEQKRGLIGIYEKANP
NAVWIDECPWDYENWLFDADYDRVMPWLEESLNRMPIFADLGIQREVHGAISHPPDGNPLIGPAPGVRNY
WCCCGTQIGIGWGPGLSRELARWIVHGAADISMRDFDPRRFGAYATKDWQVIKAREDYCLRHEIPFPHFN
RLAGRPVKPSPLYDRLKEKGAVYEEVYGHERPRWFARGIEQRDHYGFGRTPVHDMVATECAAVRSAAGIM
DISAFTKVEVSGPDAGALLDRLTANRLPQKPGGIALTHMLNRRGRIELETTVVKLDEDRFYLVCAAFFEQ
RLLDHLAAHRGTADITVRNLSTDWAALALNGPHARDILAACTEADLSNARFKWLTAQQITVAGHSLWALR
MSYAGELGWELHIPRDHALAVYDALWAAGQRYGLTDYGSFAMNALRMEKAFKGAGELTNEVTLAEADVLR
FARTDKDYLGRDKTLNAGNLPWVCAYLEIAPDGRFDGNGGEAVLLDGKVVGSTASVAYGHTVGKILAFAY
VKPQVNVPGTEVEVIIAGNPRKGRILGAPAYDPDSTKPRADAATEPAQ
>gi|56696477|ref|YP_166834.1| alcohol dehydrogenase, zinc-containing [Ruegeria pomeroyi DSS-3]
MRAMVTMGHGELDRIVLHEAWPVPRPAPGEVLIRVGACGLNNTDVNTRTGWYSKAVQEATTGSAYDRVDA
QDPTWGGAPITFPRIQGADVCGRIVAVGEGGDASRIGERIITDNWLRDPSDPQNKDTAGYFGSERDGGFA
EYCTIPAVNALAIDSPLSDAELATFSCSYSTAEGMLTRAQVTGADTVLVPGASGGVGGAVVQLARRRGAR
VIALASEAKHAEVAALGADRVLPRAPEDLRAALGAEKITVVADVVGGPYWPMLIDILERGGRYTCSGAIA
GPMVTLDLRTFYLRDLTFTGSTVIDPQAMPNLIRYIEAGEIRPALAATYPLDQLRDAQAAFIAKRHTGNI
VVTP
>gi|56696478|ref|YP_166835.1| mandelate racemase/muconate lactonizing enzyme, putative [Ruegeria pomeroyi DSS-3]
MKITRITVYQVDLPLEHPYWLSGGRLKFELLDATLVKLETDAGITGWGEGTPWGHTYVPAHGPGIRAGIE
TMAPFVLGLDPRRLLDVERAMDIALPGHLYAKSPIDMACWDIAGQAAGLPIADLMGGGSRTPRPIASSVG
AKSVEETRAVIDRYRQRGYVAHSVKIGGDVERDIARIRDVEDIRKPGEIVLYDVNRGWTRQQALRVMRAT
EDLHVMFEQPGETLDDIAAIRPLHSAPVSVDECLVTLQDAARVARDGLAEVFGIKLNRVGGLTRAARMRD
IALAHGIDMFVMATGGSVLADAEALHLAATIPDHACHAVWACQDMLTVDIAGGRGPRNIDGHLHLPETPG
LGVHPDEDALGDPVAVYS
>gi|56696479|ref|YP_166836.1| mandelate racemase/muconate lactonizing enzyme [Ruegeria pomeroyi DSS-3]
MKIARLNLWHVPLTSHTAYYMADGKTCDTVETVVIAVQTDTGITGWGEVCPIPHYLPAYARGVAPALTEL
APVILGADPVGVGALMERVDAVLHGHPYAKSALDIALWDITGQVAGLPLHALLGGWRAADMPLYHSITCI
APDDMARIAREAQAQGITQFQVKLGASGDWQTDVERLAKVREAVGPGPLVYGDWNCGATSLEAIRVGRAV
AQLDIMLEQPCATLEDCARVQRATGLPMKIDELAHDTASLLTAHRLGIMDAVALKLSKFGGLSTTRRARD
LCLHLGARMCIEDTWGSDITTAALLHLGAASEPGRVLNVCDLSGYVAPRLAPDAPVRANGRIAPPEGAGL
GITVDRGALGVPDLILD
>gi|56696480|ref|YP_166837.1| hypothetical protein SPO1596 [Ruegeria pomeroyi DSS-3]
MTQTDPAFQNLLAEFQALHAREPALAGFVALPDSLTPQPVTPVRIPPAALMESDPDLTTTAYAAIRDAFI
AAGAVAQWRLTYQGSRLGADFMDRFACYCLIGEGGPFASDSLAAYVVYMPAGLYYPFHQHPAEEIYFILA
GEAEFLMEGHPPRRLGPGDHVFHPSGHPHATRTYDRPFMALVLWRGDLETAPVLTYPEGEI
>gi|56696481|ref|YP_166838.1| glutamate-1-semialdehyde 2,1-aminomutase [Ruegeria pomeroyi DSS-3]
MIRLNSQADWVERARAVLPAAGFGNFDPAVVIARGQGARVWDQDGREYVDYLIGSGPMLLGHGDPEVMEA
VLEQLPLGTTFFANNTKGIELAEAIVQAVPCCEQVRFVTSGGEADMYAIRLARAFTGKPRIVKFEGGYHG
MSAEAQMSLAPARAVNFPTPVPDSAGIPPGVADQVLVAPFNDLEAVASLLAEHDDIAAIIAEPLQRIIAP
APGFLQGLRALCDRHGVLLIFDEIVTGFRLSYGGAQEHYGVTPDIVTLGKVIGGGFPLAALGASARIMAH
FDKGAVGGEGWLMQLGTLSGNPVAAAAGLKTLEILRRPGQYARLRDLGERLMAMHERALGAQGIAHRLSG
DATLFDVYFTDAACTDYRTARHAAPELAQVWNAVLRAEGVLKSPGKLYPSLALGEEELERTEAALNRAAA
AVTG
>gi|56696482|ref|YP_166839.1| hypothetical protein SPO1598 [Ruegeria pomeroyi DSS-3]
MTETNLQDWVGRQESAEDWLRPQPARFLQATLDRDPDLAEGDALPPLWHWLYFLEARRASELGRDAHPKK
GGFLPPVPLPRRMWAGGRFRFARPLILGRAASKRSTIASVTEKEGRSGKLCFVTVRHQLLQDGAPALTEE
HDIVYRADPTPDAPAPTPERAPDGAEFSRRITPTEVMLFRYSALTFNGHRIHYDVDYARTVEGYDGLVFH
GPLTATLLADLACAQAGRPLRAFSFRGLAPIAGPAPFDIEGRAEGDALTLWARRADGALAMRASAEF
>gi|56696483|ref|YP_166840.1| MmgE/PrpD family protein [Ruegeria pomeroyi DSS-3]
MNTASHLARFAVTARPDPAVEAVAAPAILDCIACILAGADSPAATRSRAALAPLGSGPVPALGTALTLPA
PTAALVNAVAGHAWDMDDWEEPGNTHPTVVLFPALLAAAHLRPVSGAELLAAYAVGIEVIMRLGEAITLE
HYKRGFHATATLGAIGAAAAVARLLALSEDQAEHALALSVSQALGYTAQFGSTAKPLQAGFAARTGVEAA
LLARAGATAQPHVLDDQRGFAGLLAPHDPARLAAIPERLGAPWGLLQYGLAFKPWPSCGYTHRLMTAAAE
IRIRLGGETAGITAIRACLPDFHHAILPFHQPGNQAEALFSAPASIARMLASGGLTLADGAAEFWTEPEI
RRLIALTELRAEPVRDRSLNFDPDQPDRLSVTLADGLELSASCAYPLGAPQNPMPPDQLAAKWHEITGRP
ISQYHAMLRWPQAPDIAAFLRQLAG
>gi|56696484|ref|YP_166841.1| fumarylacetoacetate hydrolase family protein [Ruegeria pomeroyi DSS-3]
MRLASFLVEGAPSYGVITDAGAHPALPAQRATCPTLRDYLRTRPVAGLPGQCGAALPLDSLVWLPPIPAP
GKILCAGMNYRKPYPVAGVAPPDPGHVVLFSRHPQTLVGHGAMLEMPQGAAAESFDFEGEIVAVIGQPGR
HIAPEAALGHVLGYSAMNEGSVRGWMKHSVHAGKNFHASGSWGPWITTADEAGDIAGMTLETRVNGTPMQ
SDSGAGMIFGLAELIAYISHIQPLEAGDIIATGSPDGTGGSRTPPAFLRSGDRVAVTVGGVGTLKNTVGA
S
>gi|56696485|ref|YP_166842.1| 2-dehydropantoate 2-reductase [Ruegeria pomeroyi DSS-3]
MKIAIVGCGAMGSIYAARLAEAGHQVLAVDMWAEHVAAINAGGLRVDGPSGTLLSRQVEAMEDLTWAGPC
DLYILATKAAGVEPAARAIAATLPAHALVLTIQNGLGAGERIARHLPADRVLLGVAEGFGAAMVGPGHAR
HTAMKLIRLGVMTGGDDPRLEQVAGIWRSGGFEVETFADIDRLIWEKLLCNVTLSAPCTAFGCTVADLRA
DPERWAVALGCMAEAFAVGRAHGVAFSFDNPVAYVTAFAERVGAAKPSMLQDHEAGRRSELEAINGAIPP
LGAALGIATPYNETLCAVIRAREAAFGGERT
>gi|56696486|ref|YP_166843.1| trimethylamine methyltransferase family protein [Ruegeria pomeroyi DSS-3]
MSRRKRKTTPETSPIERPATAAHGGSWHPVPAEAVTQLAEAAITILTTIGMAEAPPVVCDAILAAGGRLD
RGRLLYPRALIEATLAEMPRRVLLAGQDPTHDMRVGGTRAFAGTGGAAPNVMDAESGDYRPSRLADLFDA
ARLADALDHVHFFARSLVAGDVADPLRFDLTTAAAALAGTAKHVMVQATEPGHVAPLAALCHRIAGGEAA
FRARPFLSLNINHAVPPLRFHAESAEVMAEAVRAGIPVHCNVFGQLGASSPVTLAGSVAQTLAETLAGLA
FVHALDPGAPRIAGPRPMITDLRSGGLAGGAGEQAMATGLAVQVLRHWDLPCSVIAGATDSKLPDFQSGY
EKALTINTALQAGANLITQAAGSQAGLMAVHFGAMVADNDMLGAILRANIAPEITPETLALEAIAEVVRG
EGHFLGRPETYARMRSDFLYPEIADRALLGDWALGARADMGARASTRAATLLDRHWPNHLPRDLRAELAD
QFGLPIEQEPLA
>gi|56696487|ref|YP_166844.1| malate/L-lactate dehydrogenase family protein [Ruegeria pomeroyi DSS-3]
MQDPNSKLTLASGRTRLPAAKVQTRLSAIFQALRFDPDIAEEVAAHLVDASLSGVESHGVMRVLEYAAQV
ESGYLTPSGRPQVLRDDTGGPTRIEAGGGIGIPALRLAYDTCCDEARARGLSALSIRHVGHTGRHGAFAE
AAAEAGCLTICLGGGNRQTWRQVAPHGGARAMLPTNPWCIGIPGGDRGPVVLDFATSKIAGGWIYAARSA
GALLPEGCVIDAAGHPTRNPEDYFAGGAILPAGGHKGFGLALLGELVGEALLGPSTTECNWLLIALSAER
FREAPAMAAAAEEVLDELRRCPPAPGSSGVEIPGERERAHRAASGGIVSVPRDTWTQIERLADRLGVSAT
>gi|56696488|ref|YP_166845.1| LysR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MMARPSLPLHQIQAFDAAARHLSFTRAARELNVLGPAVGRQVAQLEADLGVSLFLRTKPRLTLTDEGAQL
ARAVAAGFEALHQGLAELRDRSGQAALVVNAAIGFTSYYLLPRMGAFQSRHPEIALQIVTRDQNPDYDPA
TCDLLVTFGTAGLEGMVSRRVIPERLVAVCTPAVLGGRGPLGRAELAAERLLHLSAESHFDDWQRYFEGS
GVTPPSPPRHDRFHSFMVHNRAVQNGMGIGLSWRPFMDDQLESGALVLAATHECRTTRGYYCNVTPRGAG
KPGAETFMTWLCEADRAPSPAADRSPRHP
>gi|56696489|ref|YP_166846.1| hypothetical protein SPO1605 [Ruegeria pomeroyi DSS-3]
MPADIIIHNGSLITFDEARPQAQALAIQGGMIAAVGSDAEILALAGPETRLIDAGGGTVLPGFIDSHVHL
FGGSVELDCLSLYGVKGLDAMRAAIQPYAQANPDDALVFCVMADYDILGTGHTLTRHDLDSILADRPLAM
FAPDHHTVWANTAALEATGLLQGGEVDAGSLIVLGEDGLANGELLEPGAYGPILGLTRHGGREMLGLTTG
KDPEPPATPDQRARDKDVIARGLAHCAAQGITGLHLMDGNRYQLELLTELEAEGRLLCRCEVPFHMKGTD
PVERMTAEAPAMRAAYRGDKVRCNHLKMFIDGVIESGTALMLRPYPGELGANDNTGDEVFTQEHFTACCV
EADRLGFQIAVHAIGDAGVRRTIDAFEAARRANGTRDSRHRIEHIEVIHPDDIPRLAELDIVASLQPGHA
PRGHVFPPGAVGQYLHPDQIVGAYAWQTIRETGARVVFSTDWPVIPVDVMPSLRAAIAPLDLGPDWPDQS
QSLMDTLASYTRDNAWVEFNEDSKGRLKVGMAADIAVLSHDLTALAPDDITQAAAMVTIMDGAVTYQRPG
>gi|56696490|ref|YP_166847.1| spermidine/putrescine ABC transporter, periplasmic substrate-binding protein [Ruegeria pomeroyi DSS-3]
MKKTLTALTLVLAGPAFAEGELNIFNWGNYTSPEMIAKFEAETGIKVTITDYDSNDTALAKIKAGGHGFD
IVVPSGTYIPIFVGEGLLMESKPNQMENFKHMDPQWVDVEFDPGRNYTVPWQWGTVGITVNTSVYGGDIN
TAALIFDPPEELKGKINVVPEMNDVMGLAIRYAGGEQCTADKEVLKKARDILQAAKPHWLSMDYGNIEKY
AKGDLAAGVNWNGASFRARNQNPDIAFGYPQEGFPVWMDNAAILSDAKNVEEAKIFLNFIMDPENAAMLS
AFARYANGIKGSEAFMPEDMKTAPEVVVPDALKGAAFVSKTCPPEATKLYTAIWTELQK
>gi|56696491|ref|YP_166848.1| spermidine/putrescine ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MAERVFDIRRQTGFTTIAIACFAMLYMPIILLVIYSFNAGTSIAIWEGASWRWYVSAWNNEQVQEATLRS
LIIAVWASGISTTVAVLAALATTRTRRFRGQTAVFALINQPLMVPEIVTAVALLIFFAMIKVATGYTGLA
YLIIAHSAFCIPFAYLPIRARLQGMDLSLEQAAADLYATPFQVFRRVTLPQLWPGILAGAMLAFVISLDD
VVITEFVKSAGQDTLPTYMLGQLRRVVTPEINAISTVLLSISVTMVIAFTLLSKIRK
>gi|56696492|ref|YP_166849.1| spermidine/putrescine ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MESIPDTIARRTARNRWLLLIPALAILLFAASGPLLITLVYSVLTPGDYGGVEWQFSLDAWFNVFMQRDI
FDDTLGWSDAHLSIFWRSVKLSALTTLACLAFGFPTAYFIATRPKKQRDLWMLLIIIPFWTNLLIRTFAI
LELIRNEGTVNTVLIALGLIDEPIQMLFTEFSILLGMVYVYLPLMVLPIYASMERFDFRLVEAGYDLYAT
RFRVLRKVILPLVKPGVIAGSILVFVPSLGAYVTPRVMGGGNQLMIGNLIELQFGQGRNWPLGAALSITL
LAIVMVALLAYVRVAGNEETPHG
>gi|56696493|ref|YP_166850.1| spermidine/putrescine ABC transporter, ATP-binding component [Ruegeria pomeroyi DSS-3]
MVPPTGERSLTKAISARALRKVYPGTPPVEALGGVDIDIADNEFFTLLGPSGCGKTTILRLIAGFEHPTS
GSLDMFGQSLLDLPPYKRQINTVFQSYALFPHMSVAENIGFGLEMLGKPKSEIKSTVAEMMDLVQMSHLA
DRQTSQISGGQQQRVALARALAPKPRVLLLDEPLSALDFKLRKNMQLELKRLQTETGITFIFVTHDQEEA
LTMSDRIAVMSDGAIRQIGSPRDIYDHPADRFVADFIGDTNFLPADVIATEGERVSLRLGSGKTITAPAR
HAGGGRVTLAVRPEHARLEAEDSGLLPGVLSDAVYFGTDTHFHIALDDGTAFVLRQQNSPDTETRFAKGE
RVSVSFPGEVAQVLRD
>gi|56696494|ref|YP_166851.1| LuxR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MNLTDRDILRLRRAMSSAGTPEFFASFRRLLRARMPFATFILIRFDPGKAPVMLDAWFVSKRLPSAALTE
YLENTYPFDPFFQFRDLPAGGGLYRLPEIAPDRFFSSEYYLEYYRKTGLCDEVGLLAPLPTGGRAHLSLS
RFEETGPYRRREIQCLKHHAPLLLELLAQHVTAVSPQVAVAPPAAAPSIADLIQVYAGDTLHVHLTRREA
EIAALVLQGHSNGSAALSLNIARETCKVHRRNLYRKLEISSQRDLFGLLKHLL
>gi|56696495|ref|YP_166852.1| hypothetical protein SPO1611 [Ruegeria pomeroyi DSS-3]
MWRIAMNSLPQRPADSWSPLYFLASLGAGGLAVTFFMFLMFWVPHPGRPVPVFEDILGAFRNGGLPLKAA
ILVAVIGIAVFAVVNIRLLVWNLAQLSAFRRTEAHARLMTSNGETQLLAMPLALAMAVNAGFILGLVFVP
GLWGVVEYLFPLALVAFALIGVIAFRRIGAFLSRVLSEGGVFDVTANNSFAQLLPAFALAMVAVGMSAPA
AMSTLPLTVGVSMILSVALGTFAGLYTLVAAIVAFGSMLRHGTARESAPTLMIVVPILTVLGIMMMRQEH
GLHTTFAAHGGIADTLLLTTMILAVQSVFLMLGLLVLRRQNYAATYLRGEENSPGAYALVCPGVAFSVMV
QFWINKGLVGAGLIAKFGIAYWALSALAVASQVAMIALMILLHRRHFARRMPRDAVPAQ
>gi|56696496|ref|YP_166853.1| twin-arginine translocation pathway signal sequence domain-containing protein [Ruegeria pomeroyi DSS-3]
MDRRQFLKAALAGGTAATMVSPPQAARAAPLRSSARIVIIGAGAAGTALANRLVRRLEGAEITLIDPRRA
HLYQPGLTLVATGLRPPEYVVSETADWLPGGVTWLPERVAAVDPLARTVSTEAGSTLSYDWLVVAPGLIL
DHDAIEGFSLDMVGQNGIGALYAGPEYAARTWTAASRFTQEGGTGLFTRPATEMKCAGAPLKHTFLIDDI
ARRAGNAGQMNMIFTAPQSTLFGVPIVAEKVRMLFGDRGVDTLMNRTLRAIDAGARRAIFATETGTEEVA
YDYIHVIPPQRAPDFVVQSGLAWADRWGDQGWVECDMQTLRHLRYPEIFALGDVAGVPKGKTAASVKWQV
PVVEDHLISAIQGRAGTATYSCPLITRIGRAMLVEFDYHNNLVPSFPGIIAPLEELWISWLMKEVALKAT
YNAMLRGRA
>gi|56696497|ref|YP_166854.1| hypothetical protein SPO1613 [Ruegeria pomeroyi DSS-3]
MKDLTFSTLIAVFEEIFGRGLFWALTAVAVLVTLAYIYVLVRDRAVSWKKFLTAQLSMPVGAVLAVWFVM
VMTRSQLSDLGGPVDLIVLLAIAALGAVGMAILVYTLESLLGSRRTRGRGPGAT
>gi|56696498|ref|YP_166855.1| hypothetical protein SPO1614 [Ruegeria pomeroyi DSS-3]
MKHLLLSTVLVAASAVAALAEGPAKLVTVVTSPDPQTQLMSMVLTMQAAQQGAEAHILLCGPAGDLALRE
APASATAGQPPKDMSPQGLMQMIRAKTGATVEVCAIYLPGRGADGSVLLEGVGVASPAEMAARLMASDTR
VLSF
>gi|56696499|ref|YP_166856.1| cyclic nucleotide-binding protein [Ruegeria pomeroyi DSS-3]
MDASWIDQFKGLGGLPEPLRAELEAGSQIVSVPAGTQIFAPGQSADHLWLLLEGTVKVQQKSETGREVFL
YRVHAGESCVLTTACMLAFEDHSAEGTCETDVSAVAIPRRSFDDLIARSPVFREFVFTAYSRRITDLFTL
IDDIVFQRMDVRLAARLLELADSDNIVRATHAVLGTELGTAREVVSRTLSEFQRRGWVEQARGELRLIGR
DGLEHLVKSAGGHG
>gi|56696500|ref|YP_166857.1| transcriptional regulator, putative [Ruegeria pomeroyi DSS-3]
MKLTKPLTLRFLNGDTVSLDRRAALMMMTCPIAVFIIVFSASIVRTLSIFMLDVPVSWLAAIALGLGMGA
LLWVFFLCLSLVLIRLGRMTRDGIDLPVPLIGLLGVLCNDIPMLWIYARVFDLDIWTPMAAAMIVLLAFA
VHLGFELLFAVVVLPLLARARNQRPAPAGIPRPAPDPKLMLDGETIAAKDITLIQADEHYVFVHHGGRKS
HVRQSFGSLVKALDKTAGMQVHKSYWVAFDHVQQVQPKRDGGLKLILKDKTAIPGARSRARAFREALRSR
AQMGAARTEPAKEGQF
>gi|56696501|ref|YP_166858.1| type I secretion target repeat-containing protein [Ruegeria pomeroyi DSS-3]
MRNSIWLFLGAIAPERAMQTVPARLSGETYEPEGFVRVTRDVAAPETVVPMKLTYSGNGGDPVTAETSGA
VPVSVEATFARGASREIAGGTLVSLSNGDLFYAPPAGDPIASAPAQTGTGGFRQIETLRLTGAGDPGAVT
LASLGFVPETPLVAADKGPDIIEEIDPRGLLSDGTISGTGLADRINIRYLGDRDGDVVDNLDAMGLNGEL
PESDDDLIDALGGNDTVESGRGHDTVMGGDGDDSIDGGAGADRLLGGEGADTLDGGIGADPLTPVYQQVT
SVNQILDGVNSRPDFGVTTTTNVTNVQFLSSGNVINGFHIGVDVSISGANSLAREIHSHLASSQVAGARI
VLNNLETTERVTVSIDGQVIDLNTAIASGTVEFDGAGVYVLDSLGRIVGTTDDDSVTMNVELTLALKQPL
TRLDIDFESLVPSSGTTGAVYALSFDTNPVVAPRVSTANDTLFGGVGNDLLIGNDGDDSLIGGDESDTLD
GGSGADTLFGDNEGITSARADGNDLLFGNDGDDSLIGGGGSDTLDGGSGADTLDGGDGNDSVLGQADDDL
VIGGRGNDTLDGGSGADTLDGGVDNDSVLGGIGNDILFGQAGDDTLIGGDGNDSILGGIGNDSLRGGNGD
DTLSGSDGNDTLIGDSGRDSLVGGAGDDSLQGGADADTLVGGTGNDSFFDGGGDDLVLGSEGDDLFFLGG
GHNTIGDFGFDSGLKNDGNQSNNDFVNLAINYNRTSYDAAVLNGDIDPSVIRNPLEWLRADHADDGVLND
LAAGWTANSTLTLSNGGAPVDPGQLTFDTTNVTCFCRGTLIATAGGEIPVEKLRPGDRVITRDRGYQRIR
WIGGTSREAPTAVAPIRIRTGVLKNTRDLLVSPNHRILMMGPMVEFYLGHSEVLVAAKFLVDGRAIVQEP
PGRVDYYHMLFDQHELVLSEQAWSESFHPGRVGWSALCDETRAEILDLFPELDREYGDLENSTARYVVDR
HEALVLQQSLGAYGILQREMMAC
>gi|56696502|ref|YP_166859.1| hypothetical protein SPO1618 [Ruegeria pomeroyi DSS-3]
MLNRDQAQPRRQIPDTAEQHRLPAGYGRAYAVTGEDDPPTSSPRVAGAVLLFLGGVLGACAAGVAILTGE
GVGRAVLLYFGVSLVPLAVMLVLSLVAGRKRRPPGPGVAVDCDATGAARAAFVRNRRRRILIGFVLLGTL
AAFTLTESAVIRQGIVLLCAGLLLRRSLVGRMRKPSGVPTAPDRDPDTATPEAGKTAW
>gi|56696503|ref|YP_166860.1| hypothetical protein SPO1619 [Ruegeria pomeroyi DSS-3]
MVMEIHRERAAILGTKRNEDDARVFARVRLRFSLAGQQSAETSAIVVSVAVTAERNQPWRRTRRQILASA
WHWLERYFDGASLEAGDRNLFSDVFEEQPWQKGSSLSPTQERGLQRDLRRIAREHAV
>gi|56696504|ref|YP_166861.1| glyoxalase family protein [Ruegeria pomeroyi DSS-3]
MDRQTASCSDPVAPGDSGRSGRNSGRVGLPTRDALRQSKVADPACHRPRSADPVRPITLDNLVRTTMTTI
DHLSLGVPDVAAAQNFYTDLLSNLGISCLASGEGFAAYGRERVAFLLLSPFDGGAASAGNGAHVAFAAPS
RDAVSAGHAAGLAAGATDEGAPGPREAYPIPGVFAAYLRDPWGNKLEIVHGGFSA
>gi|56696505|ref|YP_166862.1| TfoX domain-containing protein [Ruegeria pomeroyi DSS-3]
MTDPVSSIRNLGPAMDEACARAGIHSAEELRALGADAAYARLLATGTRPHFIGYYVLVMGLQGRPWNDCK
GKEKADLRARFDAIKAATKPAAASRLVAELDALGVRVRSEDLIAQS
>gi|56696506|ref|YP_166863.1| cytochrome P450 family protein [Ruegeria pomeroyi DSS-3]
MILQPPGPGERRGAARQFTGRNVMSETVMQTQIGKLDLTAPPPGFLENPFPFYDALLAHAPVLAQPDGSV
LLSRHADLDRIYRDTTLYSSDKKAAFGPKFGVGSPLFEHHTTSLVFNDPPLHTRVRKIMTSALTPRAIAR
MEPGLFETVDHLLEAMAGRDRVDLIADFASTIPIQIIGNLLDVPMDERGPLRDWSLIILGALEPKLSAEQ
LAQGQQAVTEFKTYLEDLVARRRARPGDPETDVLTRLIRGEGADQQLSEIELLQNCIFILNAGHETTSNL
IGNGLALLHDYPEERARLLADPSLLPSAVEEILRFRSPNQLGNRETTAEIELDGRRLPRGTNLHLCIGAA
NRDPAVFDDPTRFDIARKPNRHLAFAGGPHVCVGLTLARLEGRIALGRLLERFPDYCLLEGRVPGGRIRF
HGYAELPARL
>gi|56696507|ref|YP_166864.1| sensor histidine kinase [Ruegeria pomeroyi DSS-3]
MAKPLVLMRNARTRLVLLSMVLSTAMTVAVLALVYVTANRTIAGETRSVVTAELAGLADEYQRLGVIGLL
TAIERRSQDASERDALYLLTDRGGAVLAGNLVRWPPGVTAGSGWIELDLIRTESGESVPVSAASIRLPGG
EGLLVGRDASARRQFDRVLLRSVGLALLAALALSLLTGWLLTRLVFSRLKDISRTAGEIVSGDLGRRIPL
RGTGDEFDRMAATLNEMLDRIEELVGHLRTTSNSIAHDLRSPLSRLRQRVETLTDPDRDPDERGADGARA
LAEVDHLLRVFSQLTEISRAEAGLGREEFEPVDLAALARNLGEFYEPLAAETGVTLTVEAEAAPLPGHPA
LLAQALSNLLDNALRYAPADSRVSLTVSETDTDIVLAVRDNGPGVPEEDLSRLAEPFVTLDPSRTGGNSG
LGLALVAAIARMHGGCFEAENRAPGLEARLTLPRGA
>gi|56696508|ref|YP_166865.1| DNA-binding response regulator [Ruegeria pomeroyi DSS-3]
MSRRVLIVEDDAETREFLAKGFAEEGFAVECAGDGREGLYHATDGGFDAMVLDRMLPGLDGLALIKSVRA
AGLNTPVIMLTAMSAVDERVKGLRAGADDYLVKPFSFQELLARVEALLRRPQDTQEATVLACRDLEMDLM
RRKVTRAGREITLTPREFQILEFFLRRKNRVITRTMLLEGVWDYHFDPNTNIVDVHISKLRRQIDEGAEV
PLITTVRGAGYMISDG
>gi|56696509|ref|YP_166866.1| periplasmic serine protease [Ruegeria pomeroyi DSS-3]
MSIRMSRKLTPSLPAWAAAPALGALLLSSAALPVSADEALADLVEQVAPSVVTVLASQNAAPRPTGAQPS
PFEGTPFEEFFHQFGGPRGMPMPDSGPRQGLGSGFILDSEGYIVTNNHVVDGADRVTVRLSDDREFTAQV
VGTDPLTDLALLRIEAGEALPAVSLGDSDAIRVGEDVVAVGNPFGLSSTVTTGIVSAKGRNISDGPYAEF
IQTDAAINKGNSGGPLFNMAGQVVGVNSVIYSPSGGSVGLGFAVTSNIVDHVISDLREDGQVDRGWLGVS
IQNLGADIAAALGLDQTTGALVSEVVADGPSDGTLRPGDVIVAFEGKPVRTSADLPRLVGATEAGTRASI
RVMRDGKAQDIAVTIGTHQASAEVIPASADSPADAPGLGLTVAPLSAEARKGAGLDSDTGGVLITDIAPD
GPAARAGLRPGDVILRLGGSDTISPAALAKALESEKTDPALMLINRGGNQIFLAVKIT
>gi|56696510|ref|YP_166867.1| type I secretion target repeat-containing protein [Ruegeria pomeroyi DSS-3]
MATNFDNPYSANLIGLWDFRPGAENNDTGLGDGIAQDGTPVNGADFGAGWMYTGQPDQRMDVDDGDDDQF
DLDEGSLITSFRVFGHPGDGPYTVVSRGAEDSGNVDDGAGTTPGADSGYFEVRVTNDSKIEVLHRSNGVE
EILSTGANFYNIGDIVTVTYAWSDNGLDMRVVNETQGTETTVSSDQTGMTLDVTTGDEQSFAIGAREATE
GDFDQNFFGGVDYVAVLDKPVIGQPNGIVDGTPGNDTIDLGYTGDPEGDVIDGGDAVDPTHGPDDDVVDG
GAGDDSIDAGEGDDTVYAGSGSDTVNGEAGDDLLIGDGNAPGGGAGGSTREVFEWFRAPDPDDASDVDDG
DDLSGGFTQNTGGVDVSFSVLNADPGVTTVFTTEEQFVGNIDSNGPDASDDSAMESELNGQTNTAGYQLA
FSEPVTNVSFRINDIDGDGQARVQAFDADGNPITVNIAGGLNVTESDTDGVAGNETATGDGGYAGANNSN
YSILVTIPGPVARLTIEHSQDGANPSEISVSDVYFDVPNADTGVDGDDSLTGGEGDDTLIGQGGDDTLTG
GDGNDSVDGGDGDDVIDTTGSLSGNLPDRGFPSYNGLPAVPADPVVDDDRDTVDGGDGNDVIMTGDDTDL
ITGGAGNDSIDGGLDDDTIEGGDGADMIVGGEGADSILAGSGDDVVYGGLDPRFPDNLNIRDDGTDGPAD
PETTNGLDFIDGGEGNDTLYGQDDDDTILGGSGDDLIDGGIDEDSIEGGDGNDTLLGRHGEDEIHGGSGD
DVILGGTEADRLFGGDDRDTIGAGIGDTIVGGEGGNDFDVAIATGLAVVDYDPTDPTGESGTITYYNPDL
TVAGTAEFSEIENVLVVGNPGGSPTPPPGSGPTPPPSYDGIVDGTPGNDTIDLGYTGDPEGDLVDGDDAV
APLVDEQDVVLAGDGDDLVRSGLDTDVVFAGDGNDTVYGEEGGDAIDGGDGNDSLDGGAGRDIVFGGEGD
DTLSGSNENPDDGGDILGGGFGDDRFVNVGQGEVIIGGEDADGMDEDVLDLTNAAVPGGRVTVEYDAGDP
EAGIVRYFDAGGAETGTTTFSEIETVILPCFTPGTKIATPKGERLVEDLEVGDRVITRDNGIQEIRWVGS
RTLSGAELARAGHLNPVLIRQGALGGGLPERDMIVSPNHRILVANDKTALYFEEREVLVAAKHLIGLEGV
DIVEISEVTYIHFMFDQHEVVLSDGAWTESFQPGDLSLAGLADAQRDELLELFPELKTREGVEAYAAARR
SLKKHEARLLM
>gi|56696511|ref|YP_166868.1| hypothetical protein SPO1627 [Ruegeria pomeroyi DSS-3]
MDIIPILLLAAGQSRRMGGADKLMQEIDGMPLLRRTALRAIPVAPVIAALPPAPHPRHGALVGLTLDIVE
VPDAAEGMNASLRRAVAALPPEAPAAMILLADLPDLTESDLNTVRRAVDFSQKNLIWRGATEDGQPGHPV
VFHRCLFPQLLALRGDQGAQPLVRDHADRVALVPLPGQHARTDLDTPEAWADWRARQQ
>gi|56696512|ref|YP_166869.1| aminomethyl transferase family protein [Ruegeria pomeroyi DSS-3]
MKTTTRVAVIGGGVVGCSVLYHLTKLGWSDVMLIERSELTSGSTWHAAGGFHTLNGDTNMAALQGYTIRL
YKELEEITGMSCGLHHVGGITLADNRDRFDMLLAERAKHRFMGLETEIVGPEEIARIAPITNLDGIIGAL
YDPLDGHLDPSGTTHAYAKAARMGGATIETHCMVRETNQRPDGTWDVVTDKGTIHAEHVVNAGGLWAREV
GAMAGVYLPLHPMEHQYIVTDDIAEIYERDSEHPHVMDPAGESYLRQEGRGLCIGFYEQPCKPWAVDGTP
WEFGHELLPDDFDKIEESIEFAYKRFPVLASAGVKSVIHGPFTFAPDGNPLVGPVPGLRNYWSACGVMAG
FSQGGGVGLMLAQWMIEGETERDVTAMDVARFGRWISPGYTRPKVIENYQKRFSVSYPNEELPAARPNRT
TPMYDIFSDMGAVWGQQFGLEVANYFAQGDEPTYETPSFRRSDAFAATGREVRGVRAGVGINELHNFGKY
LVSGPGARAWLDRIMAGRIPATGRLSLTPMLSAKGKLIGDFTVSCLGETEFQLTASYGSQDYHMRWFEQH
QEDGITIENISDKRNGFQIAGPNARAVLAACTRDDVDNLRFMDVRRMVVGMTDCIVQRVSYTGDLGYEIY
CDSMAQRQLWWTLWQAGQDHGMIPFGMRAMMSLRLDKFFGSWLREFSPDYTAAETGLDRFISFKKNADFI
GRAAAEAERAAGPARRLCAFEVDAEDADVNAYEPIWLDGAVVCFCTSGGYSHHAGKSVALGFLPVERIAD
GLEVEIEILGQMRRARVISQPLFDADGARMRG
>gi|56696513|ref|YP_166870.1| hypothetical protein SPO1629 [Ruegeria pomeroyi DSS-3]
MRDKFLNIARRMLRLLYVRIILIAALSLMSVPLAALLGDLIPPGLADRIGAAAVDPILATLATSMLAVTT
FSLTVMTGAHRAAWSQWGPRTHVILKDDTATHSILAVFVGAYLFAMSGMVLRRTPIFGEQESVALFAMTM
VVIALIVVSIIRWIAHLEDLGSFGETLAQVERRTAVSLRALARTPCYGAHALTEEIALPENGQVIGARGP
GYVQQIFVESLQQLASQAEGRIYVTVSVGDYVQEGQELARFDTREVSEEDASAARRAFAIEGARTFVQDP
LFGLSVMGDMACRALSPGINDPATAITVIDRLSSLLLLAEPERGARDAPDCDRIWLRPLPAEALFAETFD
RIARDGASVIEVQLAVQRALAAVSARAEGALLQAARRSAARSLARGLEGLSGAEDRERLQRASLGS
>gi|56696514|ref|YP_166871.1| hypothetical protein SPO1630 [Ruegeria pomeroyi DSS-3]
MSRAVRIWGWFDAVILDLGRQMRWSFLPPLMVYFAAGAQGLTAVVGTFFVKEYLDVSAAFIAGLAFWAGL
PWALKMPLGHLVDLIWRWKAWLIYLGAALIAASFAIMYGLATRADWMPAIMSVTAWYVLAVILAPCGYVV
QDAVADAMSVEAVPRHDAQGAELPPEVQRAQHTTMQTLGRFALIGGASAVAALNIILFDGIEALSPAEKA
AAYGRIYALALLIPCISISGVLLAAWQKRQAIARLIAQGMDRVRALATFDPEGEKVRLNHWYFTGGAIFV
AMTLTVGLLDLPFSQEIVFAGSMAIVLTLMRQLVRNLDRAQARALIGTAIIVFVFRAVPLNGAGATWFDI
DVLGFDQQFLSLLYLITTVLTLVGMVVLRPLIASKTIADIVILLTLASGVLSLPGIGLYYGVHHWTAAMT
GGVVDARFIAVINTAVESPLGQVAMIPMLAWIARNAPANLKATFFAVMASFTNLALSASSLGTKYLNQLF
QITREVRGADGTVTVPADYAQLGYLLMTVAAITVLAPLLTVWLVQQSRFKSRD
>gi|56696515|ref|YP_166872.1| CBS domain-containing protein [Ruegeria pomeroyi DSS-3]
MDPSAPALDSAFWITTGAILLLLILSGFFSGSETALTAASRGKLRSQADKGSKGAQKALAITDDNERLIG
SVLLGNNLVNILAASLATALFTRAFGESGVALATLVMTLLVLIFAEVLPKTYAITNSEKAAAAVAPIIGV
VVMVFSPVVALVRLLVRGVLRLFGVRIDPDSHIMAVREEIAGALYLGHSEGVVEKEDRDRILGALDLAER
TVEEIMLHRSNIVMLDADAEPETILEHCLQSPHTRLPVYRGEPENIIGVVHAKDLFRAMYAQVGGSEGHT
ARLKDFDISRVANAPYFVPETTTLDDQMRAFLRMRSHFALVVDEYGSLRGLITLEDILEEIVGEITDEFD
PAAEMPVTRSDDGQFLVDGAMTIRDVNRAMDWSLPDDEANTVAGLVIHEAQMIPTVGQVFAFHGFRFEVT
GREGNRITGLKIRPL
>gi|56696516|ref|YP_166873.1| tyrosine recombinase XerD [Ruegeria pomeroyi DSS-3]
MPAAPTHPHQWISTFLDAQAAELGAANNTLLAYGRDLKDFTDWLERRGATLNGAERDTVEAYLVDCDAQG
LARATRARRLSAIKQLYRFAFDEGWRADNPAIQIKGPGRLKSLPKTLEVIEVDRLLEAARQTGRTSADRL
RNTCLMELLYATGMRVSELVSLPATAARGDPRMLLVRGKGGKERMVPLSPPARAALAAWLTVRDAAEEDG
ARRGIARSPHLFPSRGKSGHLTRHRFYLLIKELAVAGGVSPDTVTPHTLRHAFATHLLANGADLRTIQTL
LGHADVSTTEIYTHVLDARLTELVLDHHPLARGDKPETE
>gi|56696517|ref|YP_166874.1| hypothetical protein SPO1633 [Ruegeria pomeroyi DSS-3]
MGQGLGHRIGAAALQGGLEPLHRFDPVPDAARGGRAALGIKTQQLIGRQSADAGQPFGRLELGLPARQIT
QVGIGKGTRQAGGVQRLADCLEQAEGQRIGARGCGRRWQILEDLGAEEPVEQRQRRLGQQLQRMGGFQRQ
RRRGPVAPPRGAKDQRAVIGGQMRAGGQRGAAAVLVPGQQGRIEPAPEPLLRGGRAGQLDQRLRRVHRAQ
LHQPIHPRQQHGLGGLTAGIGGAGFGQEQRIEQGLHRRVVAHRYPHQPFGQQDRVAALPQVQRQAGHLGR
DQPQRYRQRLERGDLDLRGQSAFGHRRFQQHGAGQGFGRRVGQPVDHRQRRLLGEARNRQAHEKCRQPDA
FRDRPVPSPHPEPPAGAVRSAEPRNRPRRTGPDTRIQSARSRRDR
>gi|56696518|ref|YP_166875.1| shikimate kinase [Ruegeria pomeroyi DSS-3]
MSKIEHNSAKTIDGGAAALHKTVVMVGMMGAGKTAVGRALAQRLGVPFLDSDAEIESAANMSIPEIFERD
GEAFFRDRESRVIARLLEGAPCVLSTGGGAFLAEANRRMISEHGVSVWLKADLTVLWNRVRHKDTRPLLR
TADPRATLRALYEARVPLYSEADLCVISDGETSIEQMVDRVIAALATRKDVLELS
>gi|56696519|ref|YP_166876.1| 3-dehydroquinate synthase [Ruegeria pomeroyi DSS-3]
MMKTVHVALGARSYDVEIGPGLIAEAGARIAPLLARKRVAVLTDETVAALHLEALREGLAAGGVTMEALA
LPPGESTKGWPQFERAADWLLDQKVERRDVVVAFGGGVIGDLAGFAAAVLRRGVRFVQIPTSLLAQVDSS
VGGKTGINASHGKNLIGAFHQPSLVLADTAVLGTLTARDFLAGYGEVVKYGLLGDAAFFDWLEGQGPALA
AGDMAARVEAVTRSVQMKADIVARDETEQGDRALLNLGHTFCHALEAATGYSDRLLHGEGVAIGCALAFE
LSARLGLCSQEDPSRVRAHLKAMGMKTDLTDIPGDLPTADVLVDLMAQDKKVVDGQLRFILARGIGQAFV
TSDVPREAVLTVLEDALASC
>gi|56696520|ref|YP_166877.1| SREBP protease [Ruegeria pomeroyi DSS-3]
MTWSFTLGRLFGSELKVHVTFFLLIGWIGVSAYQMGGWPSAVENTAFVLALFACVVAHEYGHALTARRYG
IRTPDITLLPIGGLARLDRMPEKPGQEIVVALAGPAVNVAIWAALTLVGVDTRFETLAAIDSAEPDFLGR
LAMVNLFLAVFNLIPAFPMDGGRVLRAALSLTMDRVRATRIAAAAGQLVALLFGFAGLSGGNPVLVLIAV
FVFIAANAEAQDVAMRAVTRRLLARDAMITRFEALGPTDTLATAAQAVLHTTQHEFPVLDGEGHLLGFVT
RARLFAALAADHPRSDPAETVMDREIPQVPLASGLETVLDALYQGAPAVAVTSADGRMLGYVTRENVGEL
MVIQGR
>gi|56696521|ref|YP_166878.1| single-strand binding protein [Ruegeria pomeroyi DSS-3]
MAGSVNKVILVGNLGRDPEVRTFQNGGKVCNLRIATSENWKDRNTGERRERTEWHSVAIFSEGLVRVAEQ
YLRKGSKVYLEGQLQTRKWQDQSGQDRYSTEVVLQGFGATLVMLDGRGEGGGGGGFGGGQGGGDSYGGGY
DSGPAGDPYGGGPSGGGSSSGGGRGRGPASGGIDDDEIPF
>gi|56696522|ref|YP_166879.1| transglycosylase SLT domain-containing protein [Ruegeria pomeroyi DSS-3]
MRRLFSGFIAAAVAVTAMPAGADMFSTKNRRDLFQKQARLLDTRGASQYESSTRLQPPTAQTTPTRRYAG
KYKGEYLQMARDAARRHNIPEDLFLRLVQQESGWNPHAKSHKGALGLAQLMPGTARALGVDPGDPYENLD
GGARYLSRQYRKFKSWRLALAAYNAGPEAVEKYGDVPPYEETKNYVKVIWGS
>gi|56696523|ref|YP_166880.1| FadB domain-containing protein [Ruegeria pomeroyi DSS-3]
MLVDGLSALVTGGASGLGLAVAEALTNAGAKVAFLDLNEEKVSQVADQIGGVGIACDVSDPGAVSDAWAI
ACGHNGQILIDVNCAGIPGGMRFVGRDGPVDMATFARVIAADFIEAVGVKTKDAARMMALVPLTESGERG
IIRLDPGLRLQLR
>gi|56696524|ref|YP_166881.1| LysR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MSTRRLPHLTWLRAFEASARHLSFTNAAQELNLTQAAISKQVKLLEHYLREPLFERKPRSLVLTKVGAAY
LPKVRDGFERLAAGTEEVFGLRRSEVLTVRAPVGYSVNWIAPRLQGFFDRHPETEVRLVSSVWGDQFDNE
RFDLDIQYGTGRWPGYKADRLTWEVIKPVCAPSLLEGEHAIRKPADLAHHRLLHVLGYEEGWAEWFRYAK
VSGINSGQGLQFDTSLLAFEFASRGGGVALARSSMLGIEIERGRLVEPFNIEAPLQEAFYLISPETGRDH
PDAQKFRDWLIETAESDPENRRNRETYRS
>gi|56696525|ref|YP_166882.1| beta-lactamase [Ruegeria pomeroyi DSS-3]
MPIDSKQGFDPQRLRRISNWMEAHVREGRLSGLAVQIARRGEIAFSERRGYADTATRQPVAPDTIWRIYS
MTKPVTSLALLMLYEEGAFQLDQPVADFLPAFCDPRVWKGPGHALDATEPARRQITIHDLLTHQAGIIYG
DRQGNALEQALSAAGLDFDRDLVTMGQAVDALAGFPLAFHPGERWFYGLSTDVLGHLVEVISGQPLGAFL
KTRILDPLGMKDTGFSVPADKASRVATLYDHSSGGFIPSANQDRCLAPVTLESGGGGLVSTMADYQRFAT
MLLGRGAFDGGRLLGRKTFDLMVSNHMGGDLASRGQAHFSETTFEGIGFGLGVSVMLDPARAMIVGSPGE
FAWGGMASTAFWVDPVEDMTVILMTQLIPSSAYTLRRQLRVLSYQALV
>gi|56696526|ref|YP_166883.1| hypothetical protein SPO1642 [Ruegeria pomeroyi DSS-3]
MGWPLAVSAALMERKPGRLWRALAALAGGHLLSMLAILLPFTVLLWLVDYQRQIQIGAALLVIALGIYLT
INRRHPRFLARVRPTQLALWSFLAALAHGAGLMLVPIYLGICKTIETDAGHAAASVLMTSNTTVALGVAL
LHSLAMMTAGGALAFGVYRWLGLKFLSKSWFNLDLVWAASLILVGVIALVMA
>gi|56696527|ref|YP_166884.1| selenium-binding protein, putative [Ruegeria pomeroyi DSS-3]
MTLRPDPTFYPSAKLAMEGPVEKLAFTLMLSPDASKPDGLAVVDVDPTSEKFGQIVHQLIMPNKGDEFHH
FGWNACSSALSPLTGHAFLERRYLIIPGIRSSRIYIVDVKEPLKAKIHKIIEPEEVFAKTGYSRPHTIHC
GPEGIYVSTLGGGGEDGTDGPPGIFILDCETFEILGRYEMDRGEQTKHYDFWWNLPRDYMVSSEWGLPPQ
FENGIVPEDLLSNKYGHKIHFWKLRDRKNVQTIDLGANHQMALEIRPAHDPSKDYGFCGVVVDTTNLQGA
IFTWWQKDDGTFEAKKTITIDPVPADADDLPDLLKGFGACPPLVTDIDLSLDDKYLYVACWGLGEMHQYD
VSDPMNPVLTGKVEIGGIVKKTPHPNGKTFGYGPQMVEISRDGKRVYWTNSLYSTWDEQFYPGDRGAAMV
MANVGENGGLTLDKDFWVDFPAGYRSHQIRLEGGDCSTDSFCYPSV
>gi|56696528|ref|YP_166885.1| oligopeptide/dipeptide ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MSDILTIKNLRVEGRPPGGAYVPIVKNVSLNVAKGEVLALIGESGSGKSTISLASMGFARPGCRISGGEI
WLNGRDIMKLSPHNRHALRGDEVSYVAQSAAASFNPALRIGRQVIEAPLWHGAGDAATLTATAVDLYRKL
DLPNPETVGDKFPHQVSGGQLQRLMAAMAMSCGPDLLILDEPTTALDVTTQIEVLKAFKDIIRDQGTAAI
YVTHDLAVVAQVADRILVLKNGEMVEEGPTAQILHDPQHEYTRTLMDAVRPAPHLVDHVDASAAQAPVIS
VRSITTGYGALTILSDVSVDVPAASVVGVIGESGCGKSTLARVVAGLTPLREGEIKLDGKIAAPSVKDRP
RDTLRDCQIVFQMADTALNPRQRIGDILGRPLEFYQGLKGRARADKVGDLLELVDLPRSFASRFPGELSG
GQKQRINLARALAADPKVILCDEVTSALDTVVAAGVIQLLKSLKDKLGVAYMFISHDLSTVASFADEVVV
LYAGRVVEKGPSKAVFSPPFHPYTKLLLSSVPEMRQGWLEGVADTGEAKAASAGSVVIGARGCPFANRCT
HVIAGTCDRITPPPRDLPGGLTIACHLEEAKLP
>gi|56696530|ref|YP_166886.1| oligopeptide/dipeptide ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MSDATEIAKPRASVFAGLRLTWTAVLAGSVLLFWLILALFGPWIAPHGEAEIISGTTFAPIGEGGLLGTD
KLGRDVFSRLIYGVRTTLLLALITTVISFTFGVTLGFAAAILKGWFDIVVSRIVEAFMAFPSTLLALVVI
GAFGTSITVLVLTVGLVLSTSVFRVSRALGYDIGVMDFVEAARARGEGTWWILTREILPNSMAPLIAEFG
LRFTFSILFLSGLSFLGLGVQEPAADWGLMVQENVGGLFLGSSAALIPAACIASLTVAMNLLVDWFQQRQ
QGETVLEKIDQ
>gi|56696529|ref|YP_166887.1| oligopeptide/dipeptide ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MYRIILTRLAQGLLTLLLASIIIFGATEILPGDVAEAILGQSRTDEALAALREEMGLNRPAIVRYFDWLG
GMVQGDLGTSLATKRPVADMIESRMWNTLRLALLAAAISVPLSLALGLWSAMRAGGKVDKTLAMTTLALI
AVPEFFIGLILMKVFAVELKWFSASANTRPYFDFWQNFRALALPVATLSFAVLAHMMRMTRSSVINIFTS
PYMEMAALKGLPKRRLVVLHALPNALSPILTVIALNLSYMVSGVIIVETVFGVPGLTRLLVDGVTLRDIP
LIQACAMIFGAVYILLNLLADVLSIMANPRLRYPK
>gi|56696531|ref|YP_166888.1| oligopeptide/dipeptide ABC transporter, periplasmic substrate-binding protein [Ruegeria pomeroyi DSS-3]
MFVPRPSAPQSLCNSGAARHRSSGRKDMSDIDSLVRQYKAGALSRRGFFKRAGAFGLLVPAASGILAMAG
PAFAEQPKRGGWLRIAQGNTDDTAEPVRMTDTADAVYGNAIYQRLTRLLPSLEVEGDAAEEWSVNDAATE
WTFKLRSGLTFHNGQSVTSADVVESLSRHIAEGSESPAKSLLSAVTALEAPDPMTVKITLSSGNADLPVI
MSDYHLSIHPEGFTDFAHAIGSGPFKVMEFIPGERIVLERFENYYEEGKPYLDGVDFIPVPDANATLSAL
LADDVDIIYDVPAFAADQLNTNSSVTLFNVPSGSFTNMVMMVDRAPTNDPNFRKGVKHALDRELVLSQVF
KGIGTISADTPIGPTYKYWCSDVKPAEYDPDKAKFYFDKAGLSGFDLYTSETAGASANDIALTFQQSAKG
AAEVNVIKTPSDGYWSHTWMQKPMTMSGWNARPTVDAFLSIAHMKGGSWNETMWGTDETDAMIVAARAEL
NEDKRRQMYCDLQHMMNEDGGFVNAVFQNQLSAANTRVKGYAPHPVGSLGGFFSVGRDIWLA
>gi|56696532|ref|YP_166889.1| aminomethyl transferase family protein [Ruegeria pomeroyi DSS-3]
MFSISPSTRLRPSPFYEATLADGVCAMTTYNQMLMPTSYGHPEEEYWRIINGVSMWDVAVERQVQLMGPD
AGRLAQILAPRDLSKCKIGQGKYVPLCNHNGVLINDPILLKLDEDRYWLSIADSNIWFWAEAIARERGLK
VEVSEPDVSPLAVQGPKAETVVASIFGDWVRDLKYFWFRETEIDGIPVAVARSGWSKQGGFEIYLMDGTK
GTALWNIVKEAGQPQGIGPGNPNWCERVESGLVSYGGDSDGQTNPFEVRMGKYVDLDLPDDTIGIEALRR
IAAEGPKRHQLGVVLDNSEPVKAEFTWNDIDMDGMRIGDMTTCVWSYRMNKNIGFALVATSARPGDRVVV
RRAAGAVEGTLCDLPFL
>gi|56696533|ref|YP_166890.1| invasion protein IbeA [Ruegeria pomeroyi DSS-3]
MTVITEPARQTPVIHNTDVLVVGSGPGGLAAALAAARAGVDVCLVERFGCFGGNITVVGVEGFAWYRHEA
TVEAGGIGREFEDRAREMGAAVPESQSLSYEIDSEGFKLVADRLVEEAGVHGMLHRQFVAPVMEGDRVAG
IIVESKAGREAILARVVIDATGDADVAHRAGAPTLKTPAEHMQAASVMFHLAGVDKAAFMAEVRRDPQTY
KDWSTGEWTVETDGKEDDMFSPFLKKPFAKAIEEGVIPPHLNTIAGTWGAMHDTGELTYMNLVHLAGVDG
TDPDSLTQGEIEGRRQAMLAIEALRRFMPGCGGVRLRNFGMTIGIRDTRKIRAAYDMTETDVRQQGRFDD
SIGIYPEFIDGYGVLIIPTTGRYMQIPYRAVLPGKVKGLLVAGRAIGGDRIAHAATRNMACCAVAGQGAG
VAAALAVKTGCDVAQVDMAGVQAELLRQGVRIA
>gi|56696534|ref|YP_166891.1| hypothetical protein SPO1650 [Ruegeria pomeroyi DSS-3]
MTEPIREFETDLLVLGNGPPGSWRHSRRRGRGFAFG
>gi|56696535|ref|YP_166892.1| hypothetical protein SPO1651 [Ruegeria pomeroyi DSS-3]
MLVMFDRLDQAGVILHLDAISGPPARAGIRIGVVSAQGRLGQLRFLPRVVIDCSGKGDLSARIGVPYTLG
DERGNMMAVSRTFHMVGADPQAVFTRGDPCFRHTRHYQGRLPSDLYKL
>gi|56696536|ref|YP_166893.1| transposase, truncation [Ruegeria pomeroyi DSS-3]
MAVARATQERRRRCHQVARFLVEDVPGFRAAQRWGLVPAVGGRETRRLQMLYRILLGTCYLPGDLRQQID
AFDDHHNHRRCHESPQNLAPANVYFGHGQTILKKRERVKRMALETRRLLHRKSPARSKQPDGSAPLRASA
AICPKTPDDGQSGTQIRHRRHFLASTERAPHPVQEKDKARSGCACVDGPK
>gi|56696537|ref|YP_166894.1| hypothetical protein SPO1655 [Ruegeria pomeroyi DSS-3]
MQITLTCQTWLPSSTASSAKRWKPANANRHGSSYVSCTDSAQPNSKQGDYSSCPCLFRRLQSVMQNRGIK
RRCAAPFDARTLHSRMTLRRKRRREAGEFQSPNRSKGNAVTFGGICKRLGLCVTPTFDHINAALRRDQIH
VEPAVQARSRKRVLKGVDASWWRRGVKKTTVLASLISKGWRKHRLGQRVPNPSGHLFSDHLAYRTGLPDR
QQGHDPNGDGAEPHCPNS
>gi|56696538|ref|YP_166895.1| oligopeptide/dipeptide ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MIKAGGPAPSPSGLEPVAPQIATPRDIWSKRKKAFFALRQGDKNMSKMAEYDGPILEIDKLSISFFTRLR
EIPAVMDFSVTVQPGEAVGLVGESGCGKSTVALGVMQDLGKNGRIVGGTIKFKGRDLAQMSAEELRDIRG
NEIAMIYQEPMASLNPAMKIGRQLMEVPMIHEGVSADEARKRALEVVSDVRLPDPERMLNSYPHQLSGGQ
QQRIVIAMALMSKPALLILDEPTTALDVTVEAAVVELVKDLGKKYGTSMLFISHNLGLVLETCDRLCVMY
SGEAVERGSIKDVFDEMQHPYTQALFRSIPLPGADKNSRPLVAIPGNFPLPHERPPGCNFGPRCDYFEAG
RCDAQDILMEAVPGNDRHHTRCLKFREIDWNAPIMLAAQKEKGEIGEVVLKMDNLKKYYEVSANALFGGG
EKKVVKANETLSFEARESETLAIVGESGCGKSTFAKVLMGLETATDGHILLDNRSIEQIPIEERDTKTVS
DVQMVFQNPFDTLNPSMTVGRQIIRALEIFGIGKTDGERQQRMLELLDLVKLPRAFAERMPRQLSGGQKQ
RVGIARAFAGGARIVVADEPVSALDVSVQAAVTDLLMEIQREQKTTLLFISHDLSIVRYLSDRVMVMYLG
HVVELGTTDQVFSPPYHPYTEALLSAVPIADTSVIKEHIVLEGDIPSAMNPPPGCPFQTRCRWKSEVPGG
LCDKDVPPVRQLGDGHQVKCHLSDEVLARMGPVIKIAAE
>gi|56696539|ref|YP_166896.1| oligopeptide/dipeptide ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MEPLGTFEIIIRVLYQLSSVWIALLLLFALSIAFKRRLGLYGKLFDSPIGMIGFALVMFWVFVGIFGAMD
MIITHDPLSQVSGMKNKVPGTPLAGAAEGDYAWYLLGGDNLARDVFSRVIKGAWIVVQIAPLATLFAFMV
GITLGLPAGYYGGRLDTFLSFLANLILAFPVILLFYLLVTPEIVATGLPTMMAIVLFMFPIVFLCVLLNS
RYRTQPAFRTPLLIGVLGFALWLYLALISENGYLVRSIPGLPSVLDPFDIPGGILVVFVSVVFVNSPTVF
RIVRGLAMDIKTRDYVAAAQTRGEGPWYIMLWEILPNARGPLIVDFCLRIGYTTILLGTLGFFGLGLPPE
SPDWGSTINEGRKLLSIYLHPALPPALALLSLVLGLNLLADGLREESLKD
>gi|56696540|ref|YP_166897.1| oligopeptide/dipeptide ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MGLFILRRFGVMLLTALCLTFIVFFLTNLYPNLEKLAKTQGNQRMSDEQVQTWLDNRGYSDPLLTKYGRW
LGVMPGFTNTLNDGQFVGTCVRPGLTPEETPRFCGIVQGDWGYSTRFKADVDEIIWKRLGNTLYLMMWVM
ILMVPSALIVGVLAGMREGSRTDRSLSTFSILSTATPEYVSGVIFIAVFTSSTVGLKWFKGTATQAMEQP
TFENFFLPVLTIALYGMGYIARMTRASMTEVMTAQYIRTARLKGVSFPNIVLKHALRNALIAPFTVIMLQ
FPWLLNGVVIVESLFNYKGFGWVLVEAAGNNDIQLLLAVSVVSVFVVLITQLISDIGYVYLNPRIRIS
>gi|56696541|ref|YP_166898.1| oligopeptide/dipeptide ABC transporter, periplasmic substrate-binding protein [Ruegeria pomeroyi DSS-3]
MTKAIIDAGRNLLRNGCMGTPEFHRTGPGLQRRTGRSTVRGPTANRKSHRETFMTTYETRQQPVHWAAEM
HAQEFRDGKLSRREFLTRATGLGVSAAAAYGLIGLTAPTPAAASEAKQGGTLRVQMNVRELKDPRTYDWS
ELGNETRGTMEYLVEYNSDGTFRGILLESWEINDDATVYTLNVRKGVKWNNGDDFTAEDVARNIARWCDK
SSETNSMAGRFASLIDADSGQAIDGAIEVVDSHTVRLNLPNSDISLIAGMSDYPAAIVHSSFSESDLTNN
VGTGPYVIELLEVGVKCVLVRNENHTWWGEAVFGRPALDRIEYIDYGTDPSAWLSALESDEVDMLHESVG
EFIDVMDGLGYAKSEVVTMSTVVVRPNQLAEVDGKKPYADKRVRQAISLAVDNAICLELGYGGRGAPAEN
HHVGPSHPEYAELPARKHDPAAAKALMEEAGMMDFEHEIHSIDDDWRRNTTDAVAAQLRDAGFKVKRTVL
PGSTFWNDWTKYPFSSTNWNHRPLGVQIWALAYRSGEAWNEFGWANPEFDAILSEALALADADKRREVVA
RGQALIQEEGVTIQPYWRALYRHMKEGLVGTDMHIAFEHHHYKWGWAA
>gi|56696542|ref|YP_166899.1| AraC family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MAHDPAEIAEIRLSTLAQLMPLGRWQVQLAHDRGHHLLLWITRGQGTGLLDGGRIGFGTHNALFVPARHL
MALDPGRGCLGQALLIPASSAIPLPTRPLLLRIRAAADQGELTGLLDALSREQSGTRALSATAMESWAQL
AAVWLRRQSDHDDLPRPGERARDLSRRYGARLVQAFDSGATVAEHAAAIDVSPAHLTRLCKTATGLGASE
LLHNRLEHAARGLICTSPAGLGDIARHLGFASSAVFGRFIRRRTGLTPGALRRSVQPK
>gi|56696543|ref|YP_166900.1| tRNA delta(2)-isopentenylpyrophosphate transferase [Ruegeria pomeroyi DSS-3]
MAVGAALPPIPEGAPVLIAGPTASGKSALALEIAERFGGVIVNADASQVYDCWRAISARPSPEEEARAPH
LLYGHLPYDAPYSAGHWLREVTPLLDGTARPIIVGGTGLYFTALTEGMADIPATPPDVRAEADTLPLDRL
LAGIDPATAAGLDRNNRARVQRAWEVERATGRALHLWQADTPPPPLPLARTVPLVLEVDKLWLWDRIARR
FDQMLDQGALDEVAAMAARYDPALPAFKAIGVPELMAHLRGEITLDAARERASIATRQYAKRQRSWFRAR
MGDWHRLPVGG
>gi|56696544|ref|YP_166901.1| uridylate kinase [Ruegeria pomeroyi DSS-3]
MTSSTSPETPSDPSQTRYKRVMLKISGEALMGDQGFGLHPPTVKRIAHEIKTVHDMGVEICMVIGGGNIF
RGLSGAAQGMERTTADYMGMLATVMNALGMQAALEGLGVFTRVISAIRMDEVAEPYIRRRAVRHLEKKRV
CIFAAGTGNPYFTTDTAATLRANEMACEAIFMGKNGVDGVYDKDPALHDDAVRYDEISYDEVLAKRLKVM
DASAIALARDNNLPLIVFSLDTAGGFRGILAGEGTYTKVQG
>gi|56696545|ref|YP_166902.1| hypothetical protein SPO1663 [Ruegeria pomeroyi DSS-3]
MCCHCDGGACVLQDDVFLSVRRIVGEVMDIDPADLTGDTRFSDLPLEYEEDFHDIYERCCQALNVPLPAI
LNTMPVYRQRIGEQMMNGWRLLAPFFARADRLLAEHDVRMECETLDSLAETMRQGRYVSSGQFWPRANPP
RSKRYVLGWLAGLMGATVAVPYALTFLPCRLICIYWGFSTFTQMQNMLPVAFAIFLFVLVVTIAPGVYGL
YLNPKAPFRQRRQVAARHRPD
>gi|56696546|ref|YP_166903.1| ribosome recycling factor [Ruegeria pomeroyi DSS-3]
MSDDFELDTDDLKRRMDGAMANLKTEFASLRTGRASGSMLEPIQVEAYGQMTPINQIGTVNVPEPRMVTI
NVWDKSMVGKVEKAIRESGLGINPQLNGTIIMLPIPELNEERRRELTKVAGQYAEHARVAIRNVRRDGMD
QIKKAKADGISEDDQKFWEAEVQELTDKMIKVVDAALETKQAEIMQV
>gi|56696547|ref|YP_166904.1| undecaprenyl diphosphate synthase [Ruegeria pomeroyi DSS-3]
MAKDPVSAPGSGPRHVAIIMDGNGRWAQARGRPRLFGHHAGARRVREVVEACPQLGIKYLTIFAFSTENW
KRTQVEVAGLMSLFRRYIAKETRALHARGVRVRFIGDRVRLDAKLIALMDTLEEQTRENDGVQLTIALNY
GGRDEVARATRRLARDVAEGRLKPEDVDEETLPRYLDTRVLPDPDLVIRTSGEARISNFLLWQSAYSEYE
FIDTLWPDFTAEELARLCQSYGSRDRRFGAVTV
>gi|56696548|ref|YP_166905.1| phosphatidate cytidylyltransferase [Ruegeria pomeroyi DSS-3]
MSGGRWSDLTARLGSAVVLAAVAGVELWLGGLWFESFIAIVTGLMVWELMRMIAPERRGAAVQMALLTGF
AVLLAYHLPPLYRLPVLMAPALVGAGQVDRHKGIYAIFALWIAFAGLGFIWIREVMGLDWMLWLVLVVVA
TDVAGYFVGKLIGGPKFWPRVSPKKTWSGTAGGWIAAALVGAGFALQAGLGASLLILSVLASMASQAGDI
AESALKRKMGVKDSSNLIPGHGGFLDRFDGMMGAAVFVLLAGLLRAFGGL
>gi|56696549|ref|YP_166906.1| 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Ruegeria pomeroyi DSS-3]
MGATALRKVSIFGATGSIGQNTIDLIARDPDAYDVVALSGGANIAQLAADARRLRADVAVTAFPERLHDL
RAALAGSGVEAAAGPAALVEAGARPADWVMSAIVGAAGLAPGLAALKQGATLALANKETLVCAGALVLET
ARRHGARLLPVDSEHSAVFQALVGEDMEAVERIVITASGGAFRDWPLERLASATAEQAAQHPNWDMGQRI
TIDSASMFNKALEVIETREFFGIDPDRIEVIVHPESMVHALVGFRDGALMAHLGAPDMRHAIGYALHWPE
RRDLPVARLDLAALGQLNFRAPDDARYPALRLARWVMARGGLSGAVFNAAKERALDHFIAGRIGFLDMAG
LVEAVLDRFEADPGLIDAPMTLDTVTQTDHLARQRVDAAMAKRAG
>gi|56696550|ref|YP_166907.1| membrane-associated zinc metalloprotease, putative [Ruegeria pomeroyi DSS-3]
MDVIGLIPQFGNLLYTIAAFVVALSVIVAVHEYGHYIVGRWSGIHAEVFSIGFGPVLWSRVDRRGTRWQI
ALLPFGGYVKFLGDANAASGKDGDSMAEIYRRNPDDLRRTMHGAPLWARAATVAAGPLFNFVMSILVFAA
IFMTRGAPIEPLTVAEIHHLPGIETGLRPGDTILSVGGVPLPGSEFASDAEEGAAWRSFESALPLAPQLD
YSVMRDGSEVTVSGPQLYPALVGAVVPRSAAQDAGLQPGDVIRAIDGEEIAAFRQLKDMVEGSDGKPLVL
DVWREGEMLQLLLVPRRTDSPKPEGGYETNWRIGVASGQAFEPATETPGPLAALATGVSRTGDIVSSSLS
GLWHMIAGQISTCNISGPVGIAQASGAVASQGAQSFIAFIAVLSTAVGLLNLFPIPALDGGHLVFYAYEA
VAGKPPSDNVLRVLMALGITLILSLMLFSLSNDLFC
>gi|56696551|ref|YP_166908.1| hypothetical protein SPO1669 [Ruegeria pomeroyi DSS-3]
MHVLQHSYRGLGLVMQLNWDRILFVGAIAAALFLGAFLGSL
>gi|56696552|ref|YP_166909.1| OMP85 family outer membrane protein [Ruegeria pomeroyi DSS-3]
MHNGRGAGTYCGVGVSSRHMLLNSVSAIFLATAMTFAALPQDAQAQDYRFNTVQVDGNQRIETSTIISRM
GIERGKTISAGALNDAYQRLLDSGVFETVELIPRGNTLVVKVVEHPTINRINFEGNRRVKDETLEGAIGS
QSRRVFTPEQAERDAATIAEIYSTQGRVAATVVPRIIRRSDNRVDLVFEISEGDTIEIERVSFVGNRVFS
DRRLRRILETKQAGFLRTFIRSDTFIADRIEFDKQVLRDFYLSRGHVDFRVNSANVEFTRERDAFFLVMD
VTEGQQFSFGKITTVSEIPGVEAPAYQDVLKIKPGVVYSPSLVENSIARMERLGLKNGVDFLRVEPRITR
NDRDLTLDIEFALVKGPRIFVERIDIEGNTTTLDQVIRRQFRTVEGDPFNPREIRESAERIRALGFFGDA
NVETREGSTPAQVIVDVDVEEKPTGSLSFGGSYSVSDGFGVAIGLTEDNWLGRGQRLGLTLSTAQDAEQY
VLSFTEPQLLGRDLRFDIDLGVANTNSSFASYDTERAFFAPGITFRLGELSTLQLRYRWEASEMVQRTAT
TVSGAVIASEIAQGKKSSSALGLTYTYDSRIGGLNPNAGVLFEVGVDAAGLGGDNEYFKTSAKAIAQTRV
WHEEITLRASLDVGAFTWQGSGFSRAIDRFVIGPNTFRGFEPAGVGPRDQSNGVDDAIGGNYYAVARFEA
EFPLGLPEELGLRGGLFYDVGNVWDVSDVNTAGGTIVGADGSFRHVIGFSLLWTTAFGPLRFNFSKALKK
ETFDKEQSFDLTIQARF
>gi|56696553|ref|YP_166910.1| hypothetical protein SPO1671 [Ruegeria pomeroyi DSS-3]
MRPWCSGRTVRGLMGALLLFLALPSLAAAQQLGLPRHEVLTISGEILFVKSAYGRRIIDEIEAEGALLAA
ENERIVAELSREEQELTQRRTELEPQAFRVLAEAFDRKVQAHRENQAAKRQTLEARGEEARATFVDLARP
ILAALMRDTGASVILERSTVFLSLDTTDITAIAISRIDAAIGDGSALRRD
>gi|56696554|ref|YP_166911.1| (3R)-hydroxymyristoyl-ACP dehydratase [Ruegeria pomeroyi DSS-3]
MTTETKSADIQLIQRILPHRYPFLLVDKVVEIDGYSSAVGIKNVTMNEPHFQGHFPGTPIMPGVTIVEAM
AQTAGVMLGVGMDIIDSELLIYFMNIDNCKFRRKVVPGDVMKMHVETLRGKMGGKIFKFRGTATVEGEVA
AQAEFSAYVDLTGEKST
>gi|56696555|ref|YP_166912.1| UDP-N-acetylglucosamine acyltransferase [Ruegeria pomeroyi DSS-3]
MSQIHPSAIIEEGAQIGADCVIGPFCIVGPKVVLGDRVELKSHVVVTGDTTVGEDTVIFSFAVIGEIPQD
KKFGGEETRVVIGARNRIREHVTVNAGTAGGGGTTRIGNDCLLMAGCHVAHDCQLGDRVIMVNHAGAAGH
CVVEDDVIIGGISGLHQWVRVGRGAIIGALTMVPNDVIPYGLVQAPRGELDGLNLIGLKRRGVARSDITQ
LRAAFQMLAQGEGTFQDRARRMGEEFDSDYVREIAEFILGDTDRSFLTPGK
>gi|56696556|ref|YP_166913.1| hypothetical protein SPO1674 [Ruegeria pomeroyi DSS-3]
MLALIAGTGALPEELVARLSEPPLVCAMEGFAPERLAVDIPFPIEHLGSLVADLKARGVSEICLAGAVGR
PAVDPARIDAATLPLVPVIQQALTSGDDGALRAVMGIFENAGLTVRAAHEIAPDLLMPAGCPTKAQPEPA
ELADARRGAEIVAAMSAADIGQACVVHRGQALAVESVFGTNWMLGSLGQRPDAGGGVLFKAPKPDQDRRA
DLPTIGPDTVTAAVVAGLSGLVIAAGGVIVLERDRVIAECDRLGLFLFVAGPDA
>gi|56696557|ref|YP_166914.1| lipid-A-disaccharide synthase [Ruegeria pomeroyi DSS-3]
MRPAGPVPVCCRAGRLMRVFILAGEPSGDRLGGALMAGLRQLCPDVQFDGVGGPAMESEGLSSRFPMAEL
SIMGLVEVLPKYFHLKRRIAETAQAVLAMRPDVMITIDSPDFSLRVARLVKDASDIRTVHYVAPSVWAWR
PGRADKMAKVIDHVLALLPFEPPYMERAGMECDFVGHPVVTEPEATGADIAALRTELGLGAAPVLLALPG
SRRGEVERLAPVFGAALRRFLPEHPDMRVVVPVVPHVADQVAQQVAEWPGAPVLVDPRGLAPAQAAMRKR
AAFAAADLALAASGTVSLELAAAGTPMVIAYKVNWLTQKIAERMVTIDTVTLVNLVSETRVVPECLGPAC
TPENIAARLAAVHADPAAQDAAMRLTMERLGRGGTPPGLRAAQAVLDRLPG
>gi|56696558|ref|YP_166915.1| acetyltransferase [Ruegeria pomeroyi DSS-3]
MDIESLQTARLTLCPMRAEHAPALHAVFGDPEAMRFFGETHTDLAQTERWVAGTLAAPPERCREYVLLED
GEAIGKAGLWDVPELGFFLRRDRWGQGLMREALRALIPHLFATLPLDHIRADVDPRNAASLALLHQLGFV
ETHRASRTIQIAGEWADSVYLELERSNVGG
>gi|56696559|ref|YP_166916.1| tRNA-specific 2-thiouridylase MnmA [Ruegeria pomeroyi DSS-3]
MPLNSLGFAKPPSETRVVVAMSGGVDSSVVAAYLADQGYDVVGVTLQLYDHGAALAKKGACCAGIDIHDA
RRVAEERGFPHYVLDYENIFKDAVIDEFADSYLAGATPVPCIRCNERVKFKDLLETARDLEADCMATGHY
IQRKMGPNGPELHCAEDANRDQSYFLFSTTPEQLDYLRFPLGHLPSKDATREMAAQYGLAVADKPDSQDI
CFVPNGNYASVIEKLRPGAAEPGEIVHADGRVLGSHEGVIHYTIGQRRGLGIGGLSEPLYVVRLDVDRKQ
VVVGPKELLATRTIPVREINWLGDAPFTSRPEWHLSVKVRSTRPPREAIVRPISETEAEVELLTPEEGVS
PGQACVFYESDGSRIFGGGWIWRGY
>gi|56696560|ref|YP_166917.1| hypothetical protein SPO1678 [Ruegeria pomeroyi DSS-3]
MMFLRKVEGPRSVTLPDGSIMTRADLPPANTRRWVASRKIAVVRGVIYGLITLAEAKQIYGLSDEEFNSW
VSALAEHGKDALKVTALKKYRQL
>gi|56696561|ref|YP_166918.1| DNA-binding response regulator CtrA [Ruegeria pomeroyi DSS-3]
MRILLVEDDPTTSKSIELMLTHANLNVYATDLGEEGIDLAKLYDYDLILLDINLPDMNGHEVLRQLRMSR
IETPILILSGVDDTESKIKGFGFGADDYLTKPFHREELVARIHAIIRRSKGHSQSVIRTGKISVNLDAKT
VEVEGQPVHLTGKEYQMLELLSLRKGTTLTKEMFLNHLYGGMDEPELKIIDVFICKLRKKLSNATGGENY
IETVWGRGYVLRDPQADGLPDPRIAVNA
>gi|56696562|ref|YP_166919.1| DNA ligase, NAD-dependent [Ruegeria pomeroyi DSS-3]
MTEAEAAQELARLAGLLAQANLAYHTLDAPEISDADYDALKQRNAEIEARFPHLKRPDSPSEQVGARPGE
GFSKVSHAVRMMSLGNAFDDADVADFDRSIRKYLGLDVETALAYTAEPKIDGLSLSLRYEQGVLVQAATR
GDGEVGENVTANARTIADIPARIEGAPEVLEVRGEVYMSHADFAALNTRQEAEGGKLFANPRNAAAGSLR
QLDAAITRARPLRFFAYSWGELSEPLAETQMQAIERLAGLGFQTNPLTRRCADLDAMIAHYRDIEAQRAT
LGYDIDGVVYKLDDLGLQARLGFRSTTPRWAIAHKFPAELAWTRLEAIDIQVGRTGALSPVARLTPVTVG
GVVVSNATLHNEDYIAGRDSRGQEIRDGKDIRVGDWVQVYRAGDVIPKIADVDLNKRPEGANPFEFPEQC
PECGSPAIREEGDAVRRCTGGVICPAQAVEKLKHFVSRAAFDIEGLGAKQVEQFHADGWIREPADIFELR
SRYGEGLQQLKNREGWGEKSATNLFQAIDDKRRIPLARLIFALGIRHVGEVGAKDLSLHYRDWDAMAAAL
DTARLAALAHRAADTAEEQERQQAQAEGRRARISDTRAAVIAAQEVPPEAAAAWADLIGVDGIGATLGLS
LSDAFANGDERAAFDRLSAHLTVIPPDAPARDSPVAGKTVVFTGSLEKMTRAEAKARAEALGAKVAGSVS
KKTDLLVAGPGAGSKLKTAESLGIETLDEDGWLKLIEGL
>gi|56696563|ref|YP_166920.1| ATP-dependent DNA helicase RecG [Ruegeria pomeroyi DSS-3]
MSGRPEQLFPLFAGLETLEGVGPKTAQLFAHLDVETPRDLLFSLPYSVVDRRRRDTIRGADLPATLTVEV
TVGAHRPARGRGGAYRIFVEDAQADFQLVFFHARGDYLKKVLPEGSRRVVSGKVELFDGMANMVHPDHIL
PVAEAGEIPEFEPVYPLTQGVSQRTAFKAARSALARLPDLADWIDPALRAREGWPDWADAMRAAHAPQGL
DDVAATAPARMRLAYDELFAHQLTLALARRRERKARGISSVATGALQSRVLASLPYRPTNAQARAIEEIA
ADMAAPARMNRLLQGDVGAGKTLVAFMALLVAVEAGGQGVMMAPTEILARQHLEGLRPLAEEAGVVLELL
TGRDKGAERRAKLAALKKGDISILVGTHAVFQADVEFADLRLAIVDEQHRFGVRQRMELAEKGMNADVLV
MTATPIPRSLALAQYGDMDVSVLDEKPPGRKPIRTAVISTERMDEVIDHLRRAIAEGRQCYWVCPLVDES
EVSDLTAAEDRFKRLRAVLGEGVVGLVHGQMPPAEKDAAMAAFQTGETQVLVATTVIEVGVNVPNATIMV
IERAEIFGLAQLHQLRGRVGRGEAASTCLLMYQPPLTEGGRRRLEVLRETEDGFRIAETDLDMRGAGDLI
GTAQSGLPKFRIADLERHTALMATAQTDARALLAQDPELSSERGRAARILLWLMKQDQAIRLISVG
>gi|56696564|ref|YP_166921.1| hypothetical protein SPO1682 [Ruegeria pomeroyi DSS-3]
MLTQIKTVLSRSQHTLLQDAAGAASLVVMLVAALLLPGTF
>gi|56696565|ref|YP_166922.1| hypothetical protein SPO1683 [Ruegeria pomeroyi DSS-3]
MSGETDLIKLYSGRILALAADIPHLGRLDSPDATVKKRSPLCGSTVTVDVTLRDGRIDQFGQDVKACALG
QAAAAVVGAAVIGTTRAQIEAARDQLKAMLKQDGPVPDAPFDGLEVLIPARDYKNRHASILLTLEATAEA
LEQAERANCA
>gi|56696566|ref|YP_166923.1| phosphoribosyl-AMP cyclohydrolase [Ruegeria pomeroyi DSS-3]
MPFDPSTLKYDAAGLIPAIAQDAATGEVLMMAWMNAQAVARTLESGRVTYWSRSRQSFWVKGESSGHVQE
LVDFRVDCDRDCLLVTVRQTGPACHTNRRSCFYTAVREGEEVELMAPLL
>gi|56696567|ref|YP_166924.1| tRNA synthetase, class I family protein [Ruegeria pomeroyi DSS-3]
MTFTTRFAPSPTGPLHLGHAYSAILAHDMARAAEGRFLLRMEDTDLQRSKPEWDAQIIDDLTWLGLSWDA
PVLRQSEKLDDYAFALRHFAELDLLYPCSCSRSQIQAALAAPQEGVTHEVYPGLCKHRPMTSRQDGDALR
LHLDRALALFDGTYPQFTESGPCHAGTHRIDPEQAMAQIGDVVLSRKGEDIVAYFLASALDDVAQGITHV
IRGEDLFDFTAIQVILLALLDLPIPIYHHHPLIRDETGKRLAKRDDARAIAKYRAEGASPADIRAMVGL
>gi|56696568|ref|YP_166925.1| tRNA (uracil-5-)-methyltransferase Gid [Ruegeria pomeroyi DSS-3]
MTDRLHIVGGGMAGSEAAWQAAQQGIDVVIHEMRPTVGTFAHQTGNLAEMVCSNSFRSDDDEQNAVGLLH
WEMRAAGGLIMSAADAHRLPAGGALAVDRDPFAETVTARLHAHPRVSVTAEEVTELPRDGHWIFATGPLT
SPALGAAIQAETGAEALAFFDAIAPIVYADTIDMSRAWMQSRYDKGETEEERTAYLNCPMDRDQYEAFID
ALLAADKTEFHEGETATYFDGCLPIEVMAERGRETLRHGPMKPVGLTNPHQPDVKAYAVVQLRRDNALGT
LYNIVGFQTKMKYGAQTAVFKTIPGLENASFARLGGIHRNTFLNSPTLLDAQMRMKSRPNIRFAGQITGV
EGYVESAAMGLLAGRLAAAEIQGRALPEVPQDSAMGALIHHITGGAEAKTFQPMNVNFGLFRPVDGLKGG
RRGRKDRYKAYTDRAKEAWTSWLAEAENG
>gi|56696569|ref|YP_166926.1| enoyl-CoA hydratase [Ruegeria pomeroyi DSS-3]
MAILERRDTGAVAHLTMNAPERLNALSDEMLAALQAEFDALRDDAGIRAVILSGAGKAFCAGHDLKQMTA
GRQAEDGGKAYFKDLFDRCARMMMTIQSLPQPVIAQAHGIATAAGCQLVATCDMAVAAEGTRFGVNGVNI
GLFCSTPMVALSRNIPRKQAFEMLTTGQFIEASRAAELGLVNRVVPAADLESETRALAETVAGKLGAAVR
IGKEAFYRQQLLPLDQAYAYTGDVMVENMLYRDTAEGIAAFIEKRDPDWRQ
>gi|56696570|ref|YP_166927.1| thioesterase family protein [Ruegeria pomeroyi DSS-3]
MALALNREELSQYLAEVFPQVREDFAIDALSEDTITMRLLTAERHLRPGGTVSGPSMFALADVCVYAMVL
ARLGRQALAVTTNCSMDFMRKPEGGAQIVAECRLLKLGRSLAVGDILMFSEGSDKPVARASMTYSIPPQG
SAAAQFG
>gi|56696571|ref|YP_166928.1| hypothetical protein SPO1689 [Ruegeria pomeroyi DSS-3]
MTRMMHSPALMLLNASPRLPLIAALAVRFAATVTKWEQNRRTRLNLGKLDDHLLRDVGLTRQAARDEAAR
RFWQG
>gi|56696572|ref|YP_166929.1| GntR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MGTIWPDSLPQSKGAKYTLVADVIRKAIDTKELEVGVKLPPVRELAYKLGITPGTVARAYTILTDEGLLN
AEVGRGTFVAPPKRPVLDDVWSRQLYLLDERDDDNVSLFSPRLADMGQVALIRECLQKVAQGDPAMFLNY
PTRDAYAGVRQAVVDWMSDLSLGPLTADDIVLTHGGQSGLCVVFQTVFKGPKPVVLVEDLSYAGFRRAAE
LMRADVIGVRMDKWGIDPMSLDLTARQSPAQAICVSPEVQNPTGSRSPLERRKEVVEVARKHDLQIIEDD
CYRMGEPQAPSYRALAPERGWHVSSVSKTLTPALRVGFAIAPEGQSAGLRRSAEYGYFGLAQPLAELTRL
MLSDPRARDLARAVQRRMAEYVRVTVNTLGGFDLVWDSAVPFVWLRLPSGWRSAAFTRAAERAGVQVRSA
DEFALRDGRAPNAVRIAMNAHVSLERFETAMVRLRALLDNPPEQISV
>gi|56696573|ref|YP_166930.1| 50S ribosomal protein L13 [Ruegeria pomeroyi DSS-3]
MKTFSATPADIDKKWILIDAEGVVLGRLASIVAMRLRGKHKASFTPHMDMGDNVIVINADKVQITGKKRE
EHFYWHTGHPGGIKSRTKQQILEGAHPERVVYQAVKRMLPGNRLSRQQMTNLRIYAGTEHPHEAQAPEVL
DVKSMNKKNTRS
>gi|56696574|ref|YP_166931.1| 30S ribosomal protein S9 [Ruegeria pomeroyi DSS-3]
MADQINTLEELSAVAGLESLAADEPREPVRDELGRSYATGKRKDAVARVWIKPGSGKVVVNGKDQDAYFA
RPVLQLILRQPFQVAGVEGQFDVMATVKGGGLTGQAGAVKHGISKALQLYDPSLRGALKAAGFLTRDSRV
VERKKYGKRKARRSFQFSKR
>gi|56696575|ref|YP_166932.1| hypothetical protein SPO1693 [Ruegeria pomeroyi DSS-3]
MRISYGVENLRSLTRTPEIELRPITILIGRNSAGKSTYLRSFALMRQSLEVKSSAPILWYGDYVDFGDFD
AAVSNGDKDSDITFNFRVEDLDTRDVEDEIYYYNEYAYRSSRRKISYQAVSLSISLGEQLRRTVRRRIAL
EIPEDRISAVASFEKDGRECSDFQINGQRLSDLIPNVAVYFRASDIFDRPVLVRQVRKDGKSLRRVVGAA
SEIGSAISQRLRQQVDKRISEENLAIEARRILNHPRLDPTSLQQLRLRAGNRSFRKLYDRWLKDEASTTL
AEIDHLCALNHALITVGRVSSVLKGFFRNTTYLGPARARSERYYRSQELEVSEISPDGQNLPMFLASLST
TEQGRFSDWVEEAFGFGVLVERKEGHVSIKLRQRTISVNVADTGYGVSQILPVLAQIWWATQIPRNYTRQ
MRHGLRPITMEQPELHLHPAHQAKLADVFQSAIERSNASGPEAVLLIETHSEALINRLGELIEYGKIAAN
DVQVVIFSARGEGEELNTEISTSTFDDNGALRDWPYGFFNY
>gi|56698731|ref|YP_166933.1| carbohydrate kinase [Ruegeria pomeroyi DSS-3]
MNALIEELKRLLKECATKKIVVIGECVRDVFVNTQRLSGPSDYQYTITKQLQRREFPGGAYPVARDLSNF
VSKVHFVTCSTHEFPTNLERMDVIPISRERISKTRFFSGHNSNIFHYHCVFSEEITLSLTPLQELASVFS
EADLVIVLDYGHGLLNSDVRKSISQNARFVALNCQANEDKYPFHQIWKYESTDLLLLNKVEAEINLLKTG
VPVQELALRLHSKFKSTYTIVTDAEHGAVIQHDYRAYSSPAMSSCVVDAVGCSDIMLGFAALAAQNGKSA
EEILYFASVAAGAKTMINVHERPLSREDLYEIALGVQNET
>gi|56696576|ref|YP_166934.1| hydantoin utilization protein, putative [Ruegeria pomeroyi DSS-3]
MHNTNGLRLAVDIGGTFTDTVLVDGQRHILATTKTPTTPENPTLGALAGAQHVLAETGTGWSQIRGFIHG
TTLATNALIERRGAVVATVTSAGFRDILEIAYERRYSQYDINLVKPDLIVPRARAFTIGGRMDARGHALQ
PLDEKAVARLAAEIGGSGAAAVAICLMHAYANPAHELRLRDLLLEAMPGLVISLSHEVSPEAREFDRLST
TIANAYIQPQMAGYLSDFQARFSNEGLTCPILMMTAGGGMTAMETAARLPVRLVESGPAGGAILAARIAA
ETGERAVLSFDMGGTTAKLCLIDQYRPQTARKFEIARAARFIKGSGMPVRIPVIEMIEIGAGGGSIAHVD
RLGRIQVGPESAGSEPGPAAFAKGGTEPTVTDADVVQGLIEPGRFAEGRLGIDEEAAEAALVSGVGQALE
VDAAEAAHGVSEIVDENMAAAGRMHAVESGKDLGARLMIAFGGNGPLHATRVARRAHVNRILIPRDPGVG
SAVGFLFAPVSFEIIRSRYSTLEALDLDGHNAFFDAMIEEAQAVVRAGAPQGRLTGRRQAFMRYHGQGHE
IEIPLPDRALEEADIPALRRVFEEEYSRQFSRAVPGMTIEVLNWALEISSEPPALARHQEPRQKRLAQPT
GQRRILCDVTGTWREADIHDRDTLRPGDHLNGPALIIEPQTTTFVSADFSASVDGGGNIWLIRNREGDR
>gi|56696577|ref|YP_166935.1| hydantoinase/oxoprolinase family protein [Ruegeria pomeroyi DSS-3]
MSTTDTRLQVMWNRLLAVVEEQGQALIRAAFSPIVRECGDISAGIFDLQGRMLAQAVTGTPGHINTMAEA
VKTLRGRFELQDMKPGDIYMTNDPWIASGHLNDFLLMMPVFYRDRIVGFTSCTSHLVDLGGLGMGPEGSD
IYDEGLLIPPCKLVDGGALNTLLMEIVKANSREPIANEGDIYALIACCEAGAERLTGMMAEFGIDHLDEL
ADYIIDTSYRGTIEAIAELPKGTWCNVLKVDGYEQEIDLHAALTIAEDRVALDFTGTSGLSNKGINVPLN
YATAYSVFALRCIIGPDIPNNAGSLAPFHVTGPKNCILNAQPPAPVAMRHTLGQMTPDLVYGCLSHALPD
RVPAEGASCMYDLPLRHTPEAVSRGDEQFALELVFSGGTGARPGLDGLSATAFPSGVWGSQVETTEAVAP
VLITRRELRPDSGGPGRTRGGLGQVIEMRSSDNADFMLFLSVERVLNPANGRFGGQAAAPGRIRIGRDGP
DLPGKGEVRVKAGETLIFETPGGGGFGPPRERDPDDIRRDLDEGLISRQAAHDIYGLEP
>gi|56696578|ref|YP_166936.1| aminotransferase, classes I and II [Ruegeria pomeroyi DSS-3]
MIRPARHIAAMSPYALAQLKAPAGKRLISLSQNESLRPPSRRAIEAAARAGDAGHLYPDPDWSALRAALS
GLHGIPVEGILCGNGSMELIACLAQAFADERNAILAPAHGYPFFRSAAQMARARFDLAAERDRHVCVDAM
LAAVQPDTRIVFVANPGNPTGTRIPRHELVRLREGLPDDTLLVIDEAYGEFADHLGEAMFDLVGRCDTVV
LRTFSKAYGLAGMRVGWGLFPPEIARELRKVMNPNNIAVAGQLAATAALADQDYMVETCRQTAALRDGLR
ARLSKAGYDVPESFSNFVLIRMESPDDARRADEALRAEGVFLRPQGGVGLADSLRVTIGPAEKIDIAAGL
LERWAEGKKT
>gi|56696579|ref|YP_166937.1| Asp/Glu/Hydantoin racemase family protein [Ruegeria pomeroyi DSS-3]
MPALVFSCRLPTPISNLIWPFWPPMACRCISPVWGAMIRTRSRMPTRCTGWARPIWMSRCACCRACAPDV
ILYGCTSAMLTHGPVFDRGLAERIKADSGAETVTAAGALVHALQTLGVTRIGFASPYVPAINDMAVAFLA
ASGFDTVARSEVGDELDNYGQGALDPQAVLELGLAADHPEAEAIVLSCTDMRSVESIARLEQAVGKPVIT
SNQAMVFQAMQLAGIGEALPGYGQLLERERL
>gi|56696580|ref|YP_166938.1| MmgE/PrpD family protein [Ruegeria pomeroyi DSS-3]
MSFDRIASFSLATNDMPQSALDMGATLLIDTVEVAAGAASMEAGRIARDHAFAFHVAGAPEHAAHMMFDG
RRASIPGAAFATATQIDNLDAHDGYNPPKGHNGCAVVHALFAFAQARPGLSARQALSALVMSYEVAARAA
QALHATVSDYHTSGAWNALGVAALDSRLMGAGPDQLRQALGIAEYHGPGSQMMREIANPTMLHDGSGMGA
LVGSMAALLAMDGFAGAPAITVEADAAEEFWSDLGDVWTIERNHIKPYPICRWALAALDALSGLIREHGF
AADDVTMIEVNTFAEAAALFPDMPATTSQAQYSLPFALAALLVHGRIGPGDISGAALSDPKVAEVLSRVA
VREDALYSKRFHAGRWSDVSVMLKDGTRLASGDVQARGGPEAPMKRSEVEVKFRVMAAELPEPRGTALWQ
MRERLLQPEAKFSELAALVHASAEETHV
>gi|56696581|ref|YP_166939.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein [Ruegeria pomeroyi DSS-3]
MSDTPRIILHNSDTAPLTHWLRAAFPQADFRECNSYEALPALIEGYRPEVVYSVRFAGTPGFPRDALFGP
GGPRWIANGGAGTDHYGQWDPGQTTVTNTAGVAAEMMAEYILGGFLHFSLDVPGLQKDKAARVWNARTVR
PLAGKTLLIIGLGHTGRAVAARSKAFGMKVLGTRARPKPMENVDEVHAADDLHDLLPHADFIAVSTPLIP
ATRGLIGAQEIAAMKSGVIFADVSRGGVVDQTALYDALSVGHVAAAALDVFETEPLPEISPLWALENVII
SPHCSSVFAEWEEASFELFLQNLGRWMRGEGLVNIVDPARGY
>gi|56696582|ref|YP_166940.1| dihydrodipicolinate synthase family protein [Ruegeria pomeroyi DSS-3]
MKARLTGVVTPLLTPYEDDLSIAAGLFLDHAAYCLEGGAHYLSPFGTTGEAISNTMSERIAMLERLVASD
TALPEQLMPGTGLCNLEDTVTLTRHASDLGCAAAMVLPPFFYPPNDDGLYRYFAQLIETLGDKAPRIILY
NIPQNTGVPISPALSARLNQAYPDHVVAYKDSSGDWDNTAAVIEAAPGLSVFPASETLLARAMALGAGGC
ISASCNSNITAIRAMYDAVREGDHSGADMLQPGLETHRKAAQEEGLISGLKSLVAHRSNDQRWLNLRPPQ
MNADPAAGARLATTLPH
>gi|56696583|ref|YP_166941.1| hypothetical protein SPO1702 [Ruegeria pomeroyi DSS-3]
MKQDQPGPATTPRTRAKARHILDNYFIGPARDDEVLEIWGNTPEMSYAPGDRVALHVSTTADEWEFEIGR
DGLEYVPLLTKSGLPGEHHPTPLDCSVKGCGWPEAYALTIPDDWAPGGYLVTFRARKGDDRIEEHHVILI
RTAPDAARPPYVLVCATGTWLAYNCWGGSNHYEGITGPDGNAFSPVVSTQRPWTRGFCKLPEGAPRALRQ
QPTRPGEMVRYPYMEWAYAYGYSKKYASAGWASYERHFARWAEGEGYDFDVIALHDLHHDPDLLKRYACA
VFVGHDEYWSAQMRDAVDAYVEGGGNVARFAGNFLWQTRVEDEGHTQVCYKYVADRDPLMGTEQEHLVSG
AFEVAPVNRPGALTFGVNALRGVYAGLGNCVGGGAGGYTIYRSDHWAFDGAGLGYGDVLGARSRIFGYEV
DGLDYRFEDGLPFPTCSDEAVPEIEILAMGLATNIEADHGIWGETLYIGSADARFKAQVLFGEVTPETLD
ACKRGNGMIISWPRGKGEIFTAATCEWVAGLIRQDVQVEQITRNVLNRFAKSKGRSR
>gi|56696584|ref|YP_166942.1| CaiB/BaiF family protein [Ruegeria pomeroyi DSS-3]
MQNRPLSHIRVLDFGHYLAGPLVGMMLADLGAEVVRIDPPAGPRWKDPAFDMLSRGKRALTLDLKTADGR
DTALDLVRRADVVIENFRPGVMERLGLGPDALRQANADIVSLSLPGFASTDPEFAGWAAWEAVIAARTGQ
FTDMGLNRRLMGINPSFTPLGLASAYGAAFGTMSVLFALGARSRMGGDHIEVPLASALLEGLIYNCEQIE
DYPDRYKSPRELELERRAGEGLPNNLSFAELSEFLDPFYRTYTCADGRGFYIVSCSIVNHPQRVLEVLGL
GELLKELPDFDVYVDQADWPGEWALRSYPVGADDRKRLSDAMKAAFLTRPAHEWEELFGVAKAPATAQRS
TAEWLVDPHALASGLVVALDDPRHGQMRQMGNVAWLTDDPGAMKKVAGPEQDDFRDALSGVLAEPPRRPT
GGDSKGVWLDGLKVLDLTNVIAGPTIGSTLARFGAQVTLVQPVRPSVDPWNAVVFGLHAQRGKESVLLDL
RSEQGQEALWRLVAEADVITMNGTDQQRDALGLTEARLNEVNPRLILVQLDAWGGPRRGPKSDHLGYDDL
AQAATGVMTRFGGGPETPEEHAHFGTIDALTGHCACVALGAALERLRVTGKGGVARASLAAAGEMIQAQF
MYDFDGRPAFDEPSGREVRGWGSFYRCYAAADGWMFFAAPTERDAALQRVPDLSDLVGKDDADLEDLLAE
RFAQKRVADWMRAFAGGSVGITPLGSLHGTRDAGLQRESEGEIDISKATFRAVRHDRHPMGRWVDLVAPN
AVRPEKTRITIPGPAPKYGQHTREVLAGVGYADDEIGRMIESGAAAQSWSDKYLPE
>gi|56696585|ref|YP_166943.1| AraC family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MRSIRVSVLLCDAFSNMVLACLLEPLRVVRDQTGADVRWNILTEGDRAVSSSSGLSVSPEMLISDTLEPD
LVIIIGGDAFRNTKGVTSARSLGRLMQGATVIAADTGAWILAQGGFLNARKATLHWQLLEEFAEEFPKVE
VLPDRHVQDGRFWTCGSAAAALDLMLLFIRERFGASVAFDAGAMFLHDNARRHGASYPDQALSQAVSPKL
KRVVVLMSEALEKTQPVPSLAEQANISERSLRRLFWTELQTTPGRYYLLLRLARARELLRYSDISLDQIA
LRCGFANATTLTRSLRKNFSSAPLRGR
>gi|56696586|ref|YP_166944.1| phage head morphogenesis domain-containing protein [Ruegeria pomeroyi DSS-3]
MLLNALAPPDTVPTVSTSDLRDVSDANTEALNAWNARLESIFSEYQNHPQRLRPLRTAMEERLLRAFAGL
INQLRQEDLGIEQYIWRSQDDAKVRDSHAAYDDRVFRWNNPPEGGHPGEAHNCRCYAEPVLPGVQSIVVL
ADFAPAAGGVPALDPTDAIRGLRALTGIGAALLASDALQDWTDAMRDRRVDAAGARLGVDVTTVEGRLAA
TAYALVQEGISSGAYPVLPKNSEFARIGAEAAALYELMNPGTILETGVGGDPAKQRALQEFIAAAGAAFA
RGGLRLQEGEMAQGWVEVFPELTEDERRLGELPGFTPARIEQWLETYPIEDLGLPNHTGSPIPEDPTDSI
ISTPIPEETGPNIVEARPGNTTTPGGNSILPHGAKGDGREYIGLKGHDVEQIDDIIANPRPELSGVVEGR
GKFKGQDMTLLTGQDGHWVLLDPDGNVFAVSNRNLPLRHQENDPEDIVRPLERP
>gi|56696587|ref|YP_166945.1| branched-chain amino acid ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MLKLQDLTLHYGHSQILHGISMEAALGEITCVMGTNGVGKTSLIKAISGTHPRSGGEMILDGEPLGVLPA
HQLAHKGVAYVPQGREIFPLLTVRENLETGFGCLPASDRLIPDEIFELFPVLKQMQNRRGGDLSGGQQQQ
LAIARALITRPRLLLLDEPTEGIQPNIIQQIGQVIRHLRSQGTMAIILVEQYFEFAYDLADRFVVLRRGE
VLVAGRKGELSKADVLKGVSV
>gi|56698737|ref|YP_166946.1| branched-chain amino acid ABC transporter, ATP-binding protein, putative [Ruegeria pomeroyi DSS-3]
MSTLLEVSGVSVTFDGFRAINNLSFRIGPAEMRAVIGPNGAGKTTFMDIVTGKTRPDEGRVIWGERSVSL
LKMSEARIAQAGIGRKFQKPTVFEDQTVEENLLMALKKPRSWVSVLSYRPSREDIEKVYGLAQEIGLQDA
LKRKSGELSHGQKQWLEIGMLLAQEPRLLLVDEPAAGMTPQEREHTTDLLVEAAKTCAVVVVEHDMEFVR
RLNCKVTVLHEGSVLAEGSLDHVTSNQDVIDVYLGR
>gi|56696588|ref|YP_166947.1| branched-chain amino acid ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MQHSFIAKNPSVLIFLAALALFTLIVSVLSEGLGTGIISTSFIKTLGKTLCLCLIAVAMDLIWGFAGILS
LGHFAFFGLGGYMIGMWLMYERTRLIVVESLSQSEIPPTEAEVIDAIGNQIFGVVGSSEFPLIWAFADSL
FLQLLLVLLVPGLLALIFGWLAFRSRVTGVYLSILTQAMTLALALYLFQNDSGLRGNNGLSGLQNLPGVD
ASQDVVSLWFLWSSALALGLGYVLAAWLVSGKFGSVIRGIRDNEARVRFLGYSVETYKLVIFTLTACIAA
IAGALYYPQAGIVNPAEIAPIASIYLAVWVAIGGRGRLYGAVIGTAFVSLLSTWFTGGQAPDVPLGFYTI
KWVDWWLVLLGLSFVAVTLLAPKGMGGLIDLWTDRKPPGRHGADLGPDDGALREQEANK
>gi|56696589|ref|YP_166948.1| branched-chain amino acid ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MKRFLFAGLALVLSCLAATAQDAPIQPLLQEHQAAIAKSSRKTIAPAIDAIAASGLPQAQIVLETWGAKS
MWMRKSDGLFFIGEMVGGDTYRLTDFDTGEVAGEFPRTELEQLKPNSGIRALIATALVQFQLNDPDRAKR
EDALTSIQRDPEAAHLEPLRASIESEPDGILKAQKRRMERLLTISFENDIQTRIDAIDEMSGDLGVDLRA
TLNPLVATTREVAAGQVPEDRNVAARLRPGSEVLPRDEAYGLLVAKGYAPAQVTPDDIRSALAGNITGGM
VAGIPVAQLDSDTARSRAYAALAKAGRVPPILSDAEIDAALAAHVFYDSYADPSKQVTAAALAALKSIEL
KVGVNQALDLTLDALSLASIYFLAAIGLAITFGVMGVINMAHGEFIMMGAYTGYVVQQLIPDHTISILVA
IPLAFAVTFAAGVAMERLVIRWLYARPLETLLATFGISIALQQLAKNIFGTQARPLTSPEWLDGALVLND
VVSISYIRIAIFFLALMFLAVFLYIMKRTRLGLETRAVTQNPRMAASMGINPGRVNMLTFGLGSGIAGIA
GVAIGLFAKVTSELGSDYIVQSFMTVVVGGVGNIWGTLAGATMIGFLQKGIEWMNPSNTLAAQTYMIVFI
IIFIQFRPRGIIALKGRAAGD
>gi|56696590|ref|YP_166949.1| branched-chain amino acid ABC transporter, periplasmic substrate-binding protein [Ruegeria pomeroyi DSS-3]
MKPAPMRKRFSAPREETSMNFLKTTLASSVVFAALCNAAMAAEDKIKVGVLHSLSGTMAISETTLKDTML
MLIEQQNAKGGLLGKQLEAVVVDPASDWPLFAEKARELLTVHEVDVIFGNWTSVSRKSVLPVIEELNGLL
FYPVQYEGEESSKNVFYTGAAPNQQAIPATDYFLEELGVEKFALLGTDYVYPRTTNNILESYLKQKGIAE
ADIFVNYTPFGHSDWSKIVADVVALGADGKKVGVISTINGDANIGFYKELAAAGISADDIPVVAFSVGEE
ELAGLDTSNLVGHLAAWNYFQSAESDVNAEFVKSWKATMGEERVTNDPMEAHYIGFNMWVNAATEAGSTD
VDAVRAKMYGQEFPNLTGGTAVMLPNHHLTKPVLIGEIQADGQFDIISQTAEVPGDAWTDFLPESAVLMS
DWKELGCGMYNTETKTCVQTLSNY
>gi|56696591|ref|YP_166950.1| urease accessory protein UreD [Ruegeria pomeroyi DSS-3]
MELTTKLVGTCSALDRLYQSGSAKCLFPRNSRAGLEAVLLNTAGGVTGGDRLSFSAQVRAGTRLSVTTQA
CERAYRAQPGETGQVRNHLSVATGARMNWLPQETILYDGSSLDRRLSVEIEPGASLLMVEPLVFGRIEMG
ESLNDARFCDRIEITRRGRPIFLDATRLQGGIAAHLAKPFIANGAGAMALLVYLAENAEAVLPRLRQMLP
ECAGASLIGEDLLVMRVLAADSFLLRQSLLPALRLLNNNEIPRCWTI
>gi|56696592|ref|YP_166951.1| urease, gamma subunit [Ruegeria pomeroyi DSS-3]
MNLTPREKDKLLIAMAAEVARKRRARGVKLNHPEAIALISDAVVEGARDGRSVADLMQAGAEVIRAEDCM
EGIAQMILEVQVEATFPDGTKLVTVHNPIR
>gi|56698732|ref|YP_166952.1| urease, beta subunit [Ruegeria pomeroyi DSS-3]
MIPGELFPAEGELILNQGRAVTRLMVANTGDRPVQVGSHYHFAETNPALEFDRGAARGMRLDIAAGTAVR
FEPGQRREVVLIPIGGARRIYGFNQQVMGEL
>gi|56696593|ref|YP_166953.1| urease subunit alpha [Ruegeria pomeroyi DSS-3]
MPATISRADYAAMFGPTTGDRLRLADTDLIIEVERDLTTYGEEVKFGGGKVIRDGMGQAQTTRAEGAVDT
VITNALIVDHSGIYKADVGLKNGRIAKIGKAGNPDTQPGVDIIVGPGTEAIAGEGRILTAGGFDSHIHFI
CPQQIEDALHSGLTTMLGGGTGPAHGTLATTCTPGPWHIGRMLQAADAFPMNLAFAGKGNASLPAALEEQ
VLGGACALKLHEDWGTTPAAIDCCLSVADAMDVQVMIHTDTLNESGFVENTVAAMKGRTIHAFHTEGAGG
GHAPDIIKICGEEHVLPSSTNPTRPFTVNTLEEHLDMLMVCHHLDKSIPEDVAFAESRIRRETIAAEDIL
HDMGAFSIIASDSQAMGRVGEVLIRTWQTADKMRKQRGRLAEETGDNDNFRVRRYIAKYTINPAIAHGIG
HEIGSIEEGKRADLVLWNPAFFGVKPEMVLLGGTIVMAQMGDPNASIPTPQPVYSRPMFGAYGRSVENCA
VTFVSAAAHEDGIGARLGLAKETLAVTNTRNIGKSHLILNNATPQIEVNPETYEVRADGELLTCQPAEVL
PMAQRYFLF
>gi|56696594|ref|YP_166954.1| urease accessory protein ureE [Ruegeria pomeroyi DSS-3]
MDLPACRDIRRTGHWSEADDRVTLSYDDRFLRRKRLITVQDKAFLVDLAHTTSLEHGDAFQLEDGRLIEC
IAADEDLLEVTGPDLTRLAWHIGNRHTPCQIEENRLLIQRDHVIQDMLSQIGATLREVVEPFTPEGGAYG
HGRTHGHAH
>gi|56696595|ref|YP_166955.1| urease accessory protein UreF [Ruegeria pomeroyi DSS-3]
MATPTEKQILTLAQWFSPAYPVGAFAYSHGLEWSVEAGDVVDARTAQAWITDVLQHGAGWNDCLFIGSAY
RAASLQELKNINDTALAFSASSERMMETRLQGEAFCGITASVWPVDLAGLCYPVAVGRAANLVGLPLTLS
GQFYLHAFMANLVTAATRLVPLGQTEGQQIIRDLTPLCQAIADTALCANLSHLTSTAFLGDIAAMKHETQ
YSRMFRT
>gi|56696596|ref|YP_166956.1| urease accessory protein UreG [Ruegeria pomeroyi DSS-3]
MSKMNGPLRVGIGGPVGAGKTTLTAALSEALRDSHSIGVITNDIYTREDAEALMRLQILPQDRIIGVETG
GCPHTAIREDASINLAAVAEMERRHPGIEIILIESGGDNLSATFSPELADVTLYVIDVAAGEEIPRKGGP
AITKSDILIINKTDLAPHVGASLEVMERDAGRMRCGRPFVFSSLRNRDGVAEIVKLLAEIAGLEIRSDLQ
VANLA
>gi|56696597|ref|YP_166957.1| hypothetical protein SPO1718 [Ruegeria pomeroyi DSS-3]
MLPSEGLLTRLKNTFGIDVYDYRDDLAANKPLHEWSIEAQASYFSDVWYQREFEAENGYSDPNFPSLSTL
TEIAPVRLFPQESECFGAEVSIDMWPLDPTLEPGPDGIYDQDEVCAKVWKNPIELIRVGDIVVSFDENDN
LVPGPVTRTFQNGAKILLNFHGTHVTPGHVYYRPDSKKSYKYETLIDVLRDDGVIKPQDGTLIRAATNAP
VDSPRDGFVRAVTGKRKADGTVVQNDAGRIRLGTRFLVGTGKERRSFAVADLIEHGGGVVGEDELIRVGD
GAPMPFHWEFGDTLPQPEDFVLACSGTTLEDIYKAAEWESQGPRLPAPMVLDRGPVQPLKGTALSAMPRN
EPFEVVHSPTASAKPQRTPNRKQRRAIDAKQNKTANLRKRG
>gi|56698718|ref|YP_166958.1| resolvase family site-specific recombinase [Ruegeria pomeroyi DSS-3]
MGKPRPAPACAKGKLRGKQPDRQSRELRRMYDTGDYSVRDLAEVFSVSRPTIYRTLQRVPGVG
>gi|56696598|ref|YP_166959.1| TRAP dicarboxylate transporter, DctM subunit [Ruegeria pomeroyi DSS-3]
MDVAILFSIFVGGLVLGIPVAITLGLSSLAYLIAAGMPPVVMPQKMYAGMDVFVLLSIPGFILAGNLMNQ
GGITGRIIRFANALVGWIKGGLGLTNIAASMLFGGITGTAVADAASLGGVLIPGMKKAGYPADFSAAVTA
ASSTVGPIIPPSVPMIIVGALSGISVGKMFLAGAIPGILMGIAMMVTAYIISVRRGFPHQPWQGFGEVAR
SFAGAIWAIAMTFLIIYGLLSGLATPTETAVVASVYAFIVGAFIYRELPLGKVPGIVANSAVSAAGILAL
VGFANVFGWILVSERIPQAIADGVLSITDNKFLVILLINLLLLFVGMFMETIAALIILFVPLLSLAQAVG
IDPLHFATFAVLNLMIGLTTPPVGVCLFVCANIARLPLAPVVRAIMPFLLTNILVLLAVSYFPPLATWLP
SLLIP
>gi|56696599|ref|YP_166960.1| TRAP dicarboxylate transporter, DctQ subunit [Ruegeria pomeroyi DSS-3]
MAGRLIQIVVVLARFGAGLAFAVIMAAVLVQVVGRIYGSSPVWTEELTRYALLYMVAFGAGLAFRTGDLV
NVDVISESLPGRLPWALRLFSAIATGGLALYLLPHAWKYVAIGKMQTAPAMGIRMDFVHLTVWLMLAGLA
LFAVLRVIGMLAGADDGTPHIAEEEE
>gi|56696600|ref|YP_166961.1| TRAP dicarboxylate transporter, DctP subunit, putative [Ruegeria pomeroyi DSS-3]
MGTCPCRSMHPSKEETSMKFTFKVSALAAAVAVAVAAPVAAQEMTLKLGHLANEENSWHKASVKFGQELS
ALTDGRIAVEVFPNESLGKEIDLINGMQLGTVDMTITGESLQNWAPKAALLAVPYAFKTIEDMDAFAAGP
IGDEIKAQIIEKVQIRPIAYFARGARDLTSNRAITSPADLNGLKMRVPNVPLFVDVWKALGANPGPMAFS
EVFTSLQNGTIESQENPLALIRSASFYEVQSHVNLTDHVRSWIYLTIAESTWNKLSADDQNAVMEAAARA
QAYERGLFEASLAADRAFLESKGMTFVEVDAAAFQAAAKDAVLANVNEEIKPIVEGLFAE
>gi|56696601|ref|YP_166962.1| GntR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MRIERNSAWELDPAVPITPQITRILRERIIQNDLKPGDRISESELARAYDVSRQPIREAFIKLADQGLVE
VRPQRGTIITKIGYAAVLDARFLREAIEADIAKILAADPDRHVIAELRDQLARQASLDRRDPGAFIRLDE
LFHRTLAEAAGKGGAWKQIEGLKSQMDRVRYLALGEFGIETLVRQHRAIVDQIELGDVAGSNKAVRHHLR
EVLKDLPQIVEANRSSFQLPDGDMPLPVNAPIQGGN
>gi|56696602|ref|YP_166963.1| mannonate dehydratase [Ruegeria pomeroyi DSS-3]
MERTWRWFGPSDRVTLADVAQAGATGIVTALHHVPTGAVWSPDDIELRQNQVATLPDGKPSNLEWSVVES
LPVSEDIKKQRGDWRQHIANYRESLRNLAAAGIEVICYNFMPVLDWTRTDLAWRLPNGATCMRFDLIDFV
AFDLHILKRERAGEDYEEELRAQAARRFSEMSAEAAETLAGNVVFGLPGAAERFTLEDVREHLAEYAGMR
EEALRGHLVDFLSEVVPLAQELGLRMCCHPDDPPFPLLGLPRIMSTEAHYKAVMDAVDVPANGITLCSGS
LGARPDNDLPGMMDRLGDRVHFLHLRNVKRETANVRGSFYEAEHLGGDTDMVALVEAALREEARRKAAGR
RDQSIPFRPDHGQDILDDLGRRAQPGYPSIGRLKGLAELRGIIAALEPRIAAR
>gi|56696603|ref|YP_166964.1| D-mannonate oxidoreductase [Ruegeria pomeroyi DSS-3]
MITPLAGLDGLPKTVRCPAYRREDHGPGIVHIGLGAFHKAHQAVYTDDALAAEGGNWRIIGVSLRSTAPA
TELGRQDGLYTVIERSVEGTSARVIGAIAAAYSLGRDRQAVLDALCDPSTRIVSLTVTEKAYGIDRKTGG
IDRNHPAIAADISDPDNPQGVAGLLVWALSRRRDAGTPPFTVLCCDNLPESGSMLRALLVDYARLAAPHL
VDHITNAVAFPSTMVDRITPARTPATLALACDLIQHSDAAAIECEAFRQWVIEDDFPTGRPAWEAGGALL
VRDVRPFEDMKLRMLNGTHSMIAYAGFLAGHKYVRDVMADTSLAVLVERHLKAAATTLDPLSGVDFSAYA
AELRARFSNPHLEHETYQIAMDGSEKMPQRIFAPALDALEKGQPLDAFAFATACWLRYLMGRTDGGHAYA
LRDPRETEITAALTGAATAEDILSSISRLPGILPQRLEESATWRRLVINMTTELLSGDIPAVLDRFASDA
GRLG
>gi|56696604|ref|YP_166965.1| hypothetical protein SPO1725 [Ruegeria pomeroyi DSS-3]
MSHSISNTTLVRRDRLRQLQQREKAWFDLEFLKAIAPEDRSRCIDLLDRSKSQLRQDLFALCQTGFKEDG
FFVEFGATDGIELNNSYLLETGFGWSGILAEPARGWHAALKANRAATIETRCVWHTSGETLGFTEAPRGE
NSGISTFVKSSRRIRGQNYKVETISLVELLETHQAPAHIDYISIDTEGSEFDILNAFDFDRWTFGVMTVE
HNHAPQREDIHALLTGKGYRRVLQDISRFDDWYLREG
>gi|56696605|ref|YP_166966.1| TetR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MRKQGYHHGNLKQALIDAALELIRAKGPTGFTLSEAAKTAGVTPAAVYRHFDGREELIAEAARQGFEIFA
DLMQYAYDKGQPSALAAFEATGRAYLAFARKHPGHYIAMFESGISVNRSPELAAASNRAKAVLEQAAADL
SDHIPPGKRPPAAMVSAHIWAMSHGVVELYARNAGATAPFAPEDLLESGVGIYLRGLGLIPPD
>gi|56696606|ref|YP_166967.1| polyphosphate kinase 2, putative [Ruegeria pomeroyi DSS-3]
MNRNGSTKDPRRMTGAATGEISRYFNDKAPKDIRRAIEKADKDDILSTTYPYDAEMTAKDYRAQMEALQI
ELVKLQAWIKQSGARVALLFEGRDAAGKGGTIKRFRENLNPRGARVVALSKPTEAERSQWYFQRYIQHLP
SAGELVFYDRSWYNRGVVEHVFGWCDEEQRERFFRQVMPFEHDLVDDGIHLFKFWLNVGRAEQLRRFHDR
ERDPLKQWKLSPVDIAGLDKWEAYTTAISQTLTRSHSDRAPWTVIRSDDKKRARLAAIRTVLSGIDYDNK
DRAAVGQPDAAICGGPDIWDA
>gi|56696607|ref|YP_166968.1| esterase, putative [Ruegeria pomeroyi DSS-3]
MRVVLILALLAAGFWALTLWRAARHEARAQASHPPLGQFVTVEGLRIHAEVMGSGPDLVMIHGSNGNTRD
LSFVLAPILADHFRVILLDRPGLGFSDPAPAGAADIAGQARLLMLAAEQLGAKRPIVLGHSYGGSVALAW
AVHHPDRLAALVPVAAPSNPWNTPLDLLYRVTSTRLGAAVAVPLITAYVPDSYVTRALEDVFAPQPAPAG
YADHFGPGLSLRRASLRANAAHRASLLGEIEALHPRYGEIAVPTEIVHGTEDDTVNFDLHSTTLSGQISG
AVLTPLPGVGHMPQHVAAQVVADAVLRAATRAGLR
>gi|56696608|ref|YP_166969.1| homoserine O-succinyltransferase [Ruegeria pomeroyi DSS-3]
MPIKIPAHLPAYDILTREGVMVMSEDQAARQDIRPLRIGLLNLMPKKIQTETQFARLIGATPLQIELSLI
RMTEHQTKTTASEHMEEFYRPFQEVRDEKFDGLIITGAPIEHLEFSDVTYWDELGEVFAWTQSNVHSTFG
VCWGGMAMINHFHGIRKHMLDHKAFGCFRHRNLDPASPYLRGFSDDFVIPVSRWTEVKQAEVDAVPELVT
LLGSDEVGPCLISDPGHRALYIFNHFEYDSDTLKQEYDRDVEGGTAINVPINYYPDDDPSRKPLNRWRSH
AHLLYGNWISEIYETTPYDMARIGLESTDLRG
>gi|56696609|ref|YP_166970.1| single-stranded-DNA-specific exonuclease RecJ [Ruegeria pomeroyi DSS-3]
MRQQTDLPQAVCQVLARRGVPAIEARGFLDPKLKELLPDPRKLKDMEIAAARFLAAVAGRQRIAVFADYD
VDGGSSAALLICWLREMGQTATLYVPDRIDEGYGPNEVAMADLARGHDLIVCVDCGTLSHGPIAAAKGAD
VIVLDHHLGAETLPECVAVVNPNRQDESGDLGYFCAAGVVFLMLVEAGRQLRARGQRGPDLMAMLDLVAL
ATVADVAPLIEANRALVRQGLKVMAQRQRPGLVALADIARMDAMPNTYHLGFLLGPRVNAGGRIGQADLG
ARLLSTDSMSEAQALAERLDLLNTERREIEAAVRAAALDQAETRGLEAPLVWAAGEGWHPGVVGIVASRL
KESANRPAIVIGFDGDEGKGSGRSVAGVDLGASIQRLAAEGLLVKGGGHKMAAGLTVLRDRLEPAMERLS
ELLAKQGAGQGGPADLRLDGVLMPGAATVELLEQIELAGPYGASAPAPRFALPDLQIRFAKRVGASHLKL
SLADGMGGGLDAILFGAFDGEIGPILENHGGARFHFAGRLEINSWGGRQSVQLRVDDVARA
>gi|56696610|ref|YP_166971.1| fructose 1,6-bisphosphatase II [Ruegeria pomeroyi DSS-3]
MPEFHDRMLSLGLARVAEQAALASASLIGRGDEKAADQAAVNAMREQLNLLDIAGVVVIGEGERDEAPML
YIGEEVGTGNGPGVDIALDPLEGTTLTAKDMPNALTVIAMGPRGSMLHAPDVYMDKLAIGPGYAEGVVSL
DMSPRERVEALAAAKGCKPSDITVCILERPRHEAMIAEVRETGASIRLITDGDVAGVMHCAEAETTGIDM
YMGSGGAPEGVLAAAALKCMGGQIFGRLLFRNDDERGRAAKAGITDLDRVYTRDEMVTQDVIFAATGVTG
GSLLPRIKREPGWVETTTLLMRSKTGSVRRMSYRTPV
>gi|56696611|ref|YP_166972.1| homoserine dehydrogenase [Ruegeria pomeroyi DSS-3]
MKPALRLGIAGLGTVGVGVVRIIRRQADLLEARTGRRIEITAISARDAGKDRGVNLSSYAWESDPVALAR
RDDVDVFVELMGGENGPAKASIEAALETGKDVVTANKALLAIHGQALAEQAEAAGRVIRFEAAVAGGIPV
IKALTEGLAGNEITRVMGVMNGTCNYILTRMESQRKGYNALFQECAELGYLEADPTLDVGGIDAAHKLAL
LAAIAFGTKPHFDGIDIEGIERINLEDIAYAADMGYRIKLLGVAQRSGRGLEQRMRPCLVPADSPLGQLE
GGTNMVVIEGDAVEQIVLRGPGAGEGPTASAVLGDICDIARGFRLPVFGQPATALAEADSAQSNSPAPYY
LRLLLPDRPGALAKVAAALGDAGVSINRMRQTGHDSAEAPVVIVTHKTQRADLDAALEAMTAAGVLAAEP
VALRIEAV
>gi|56696612|ref|YP_166973.1| hypothetical protein SPO1735 [Ruegeria pomeroyi DSS-3]
MHPRPQFTTKGPGVNSSGTRMSRTALFPLLLLMAAACTQVPELNERIGPDLRTAAFPKLVPLDEALGPPV
DPEGEARAVQEALEARRAALAGRARRLQQASHDDSTQTSTE
>gi|56696613|ref|YP_166974.1| TetR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MARTQGSHSDITGPRIQDAALRLFARHGFAAVSMRQIAGEVGVQAGALYNYTPDKQSLLFGLMHRHMDEL
LSARRDQARGDALTRLRDFVGFHIRFHLNRPDEVFIAYMELRNLTPENFATIEGLRRRYEDDLEAILRAG
VAEGVFAVPDTKIATLAVIAMLNGVNTWYRAEGRLSLDEVESVYWDMVRKAVAA
>gi|56696614|ref|YP_166975.1| pirin domain-containing protein [Ruegeria pomeroyi DSS-3]
MSIRPILETRRATPALEGAGVKLHRAFGFQDPTELDPFLLFDDFRNEHPQDYLRGFPWHPHRGIETITYV
LAGTVEHGDSLGNSGTLGAGDVQWMTAGSGILHQEMPKGNPQGQMHGFQLWGNLPASQKMTAPRYQDVAG
SEIPEVIDDDGTRVRVIVGSFWGKTGPVDGIAADPQYLDIFVPAGVKKTFRIDTYRRAFAYVFEGAGAFA
DASAPTGVLLEKEVAGEEVNIRDLSGDRTLIRFGTGDEVTVQAGPQGVRFLLISGAPIAEPVAWHGPIVM
NTQEELMQAMRDLRNGTFIRPAH
>gi|56696615|ref|YP_166976.1| dehalogenase, putative [Ruegeria pomeroyi DSS-3]
MTAMSYPANRPDRTRPTDTAAGIETTEAFERFAQRNDVFTRAMWDPQVRSKQTDAFFASYRMEAAPRRGD
GFTQRDFALRNAAWLISDVVTNRFAAEGRREGFQAPISYDTPVAPQQVGVDDPAAMSAEIKRIARFFGAD
LCGVTELDERWHYTARVDTRDMSEAPLGLPDGLTSVIVLGHEMERDLVATYPSALAGAATGREYSHEAAV
VMQLATYIRNLGYEAVASMNDTGLVIPYAVKAGLGEYARNQMVITPEFGPRLRFSKVFTNLPLAHDVPRP
RGVRAFCDICTACADACPVKALPYGPPSDVAPNVSAIRGVRKWTSDAEKCFGFWAKLASDCAICMRVCPF
NRDYARRRNRLWLRLALSPLRHLALRLARGHGKRRKPAEWWAGT
>gi|56696616|ref|YP_166977.1| hypothetical protein SPO1739 [Ruegeria pomeroyi DSS-3]
MAVTLTRGLWVGQGACSTPAQSAMQAQRIKGRHHMQDEVLATIEASAPRRWLALAVLTILGGLLIYVAVV
TPPELIWQVFLIVLGALTLWLAQRMFQATAGRVEMTATELRGSDGTVIARIADIEGLDRGVFAFKPSNGF
LLRTSVPGERTWQPGLWWRMGRRIGIGGVTPGSQTKFMAEMLSAMMAERDGTLPR
>gi|56696617|ref|YP_166978.1| hypothetical protein SPO1740 [Ruegeria pomeroyi DSS-3]
MCRSRCNAMFKSRILNSLRLFRRNEDGSIAVEALLTVPMLFWTIMIGYTYFDGYREAASNVKAAYTIGDL
ISRETRTVDDAYIDSMVDLFERMVQDTASLQVRISLLRYDKKRDRHRVRWSANRGYDTALSNANVATVSS
RLPPMSDQDTLILVETKNIYRSPFRVGLEDTEMETFIFTRPRFTNEIAGSV
>gi|56696618|ref|YP_166979.1| hypothetical protein SPO1741 [Ruegeria pomeroyi DSS-3]
MKRRLSNFLRRFRRGEDGNATVEFVIVFPAVIGVMLAGVELTFMTLNHAMLERAVDVVVRDLRLNTGSNP
SHNELKSKICEKAVFIRGCSSNLKLEMIRQDPFAGITLPADPDCTDLSAEVRPVRNFENGQANELMVLRA
CAKIDPIFPTSTLGATLANDEGQYSLTAMSVFVQEPL
>gi|56696619|ref|YP_166980.1| hypothetical protein SPO1742 [Ruegeria pomeroyi DSS-3]
MMFNTLISIGAASRRVRNRLKDRANAFAREEDGLMTVMALFLFLALVGAAGIGVDLMRYEQKRAALQYTM
DRAVLAAADLDQQVSPETVVRSYLEKAGLLEYLSSVTVQEGLGYRKVSATATAELPTHFMKLSGYDSLTI
PAASTAEESIGNVEISLVLDVSGSMNSNSRLYNLKNAAKEFVDHMLSATEPGTVSISIVPYATQVNAGAD
ILSYYNVSTEHNYSHCVNFIDDEFSQPGLSRVTPLERTMHFDPFSYTKDPISTPVCPVRASTEILPFSND
QTVLNNYIDGLTGRGNTSIDIGTKWGVVMLDPGTQSVISGLISDNKVPASFQGRPSAYDSGDVLKVLIVM
SDGENTNQYMLNPSLRDGDSPVWYNAAEDVISGSPDNNTTNAFSIYHDNGNNSYYWPDQNRWADHPYGNG
QSEACGYNSSGYYSCAMRDEPGEAVRLTYAELFAKVSLAYNAYYNFEFNSNAWAEWYTAAMTHKEASAKD
QRTDHVCDAAKDEGIIVYTVGFEAPYSGRRVLKRCASSDSHYYDADGLEISDAFTSIASSIRKLRLTQ
>gi|56696620|ref|YP_166981.1| glutamate dehydrogenase [Ruegeria pomeroyi DSS-3]
MAPKNEPSFRQSVDMMFNRAVALMDLPPGLEEKIRVCNATYTVRFGVRLRGQIQTFVGYRSVHSEHMEPV
KGGIRYAMSVNQDEVEALAALMTYKCALVEAPFGGSKGGLCIDPRQYEEHELEQITRRFAYELAKRDLIN
PSQNVPAPDMGTGEREMAWIADQYARMNTTDINARACVTGKPLNAGGIHGRVEATGRGVQYALQEFFRDR
VGVGKSGLDGKLDGKRVIVQGLGNVGYHAAKFLSEEDGCVITGIIERDGALVSDEGLDVEAVHNWIVKHG
GVTGFPDGTFVAEGAKVLEEPCDILIPAAMEGVINLANADRIKAPLIIEAANGPVTAGADEILRKKGCVI
IPDMYANAGGVTVSYFEWVKNLSHIRFGRMQRRQEEARHQLVIDELERLDRYLGDAWSMTPQFKEKYLRG
ADELELVRSGLDDTMRIAYQAMRDVWHERGDVEDLRTAAYLVSIDRVAKSYRAKGL
>gi|56696621|ref|YP_166982.1| sarcosine oxidase beta subunit family protein [Ruegeria pomeroyi DSS-3]
MRFSGLRVLKEGLTGNKGWRPHWRDPAPKPEYDLVIIGGGGHGLSTAYYLARDHGLTNVAVLERGYIGGG
NIGRNTTIVRANYFLQGNSEFYSHSLKLWEGLEEDLNYNVMHSQRGILNLFHSDGQRDAAARRGNMMLSQ
GDDAILLGREELRAKVPFLNFDDQRFPLYGALYHPRGGTARHDAVAWGYARGADSRGVDLIQNCEVTGID
VENGRVRGVQTVRGPIRAKKVAMVAAGRSSQVAAMAGMRLPIESHILQAFVTEGLKPVIDQVITFGMGHF
YISQSDKGGLVFGGDLDFYASYAARGNLPTVEHVMEAGMALMPMIGKARVLRSWGGIMDMSPDGSPIIDR
THIDGLYVNCGWNYGGFKAVPASGNVFAHLLATDQYHPAATRFRLDRFRTGRGILDEEGTGSQHNLH
>gi|56696622|ref|YP_166983.1| sarcosine oxidase delta subunit family protein [Ruegeria pomeroyi DSS-3]
MRITCPHCGDRDSREFSYKGHALALERPAPEAGGEAWDNYVHLRENPAGETRDLWHHHFGCGAWLVVTRN
TLTHEVLGCELASEARR
>gi|56696623|ref|YP_166984.1| sarcosine oxidase alpha subunit family protein [Ruegeria pomeroyi DSS-3]
MRVQGKGLIDRDRPVSFTFDGVGYSGYQGDTLASALLANEVRLVGRSFKYHRPRGILTAGSEEPNALVTI
GRGGRQDPNVRATVQEIYEGMEAQSQNRWPSLSFDLMAINDLAAPFLGAGFYYKTFMWPRSFWEKLYEPV
IRRAAGLGALSGQDNADRYERAFAFCDLLVIGAGPAGLMAALVAGRAGADVILAEEDARMGGRLLAETYE
IDGKPGAVWAEEVLAELRGMENVRLMTRTTVAGAYDQGTYAALERVSHHRADRGAGAPLECFWRIVARRA
VLAAGALERPIAFANNDRPGIMTAGAVRAYLNRWGVSPGRAVTVFGNNDDAHRTVRDLLAAGVHVAALID
SRHDAPRLDGVRMIRGGQVCGSGGRQGLERITVRHPSGEERIATDCLAMSGGWNPSLHLTCHMNGRPEWR
RDIAAFVPVAGMVPGLRAAGACNGAFSTTACLREGAEAAAEALGALGIKAAQGVLPVAEETPYALEPLWA
VPGRGRAWLDFQNDVTVKDVKQAAVENFRSVEHMKRYTTQGMATDQGKSSNVAALAVLADATGRGIPETG
TTTFRPPYSPIAIAALGAGGEGKGFQPERFTTSHAATLSRGAPMIEAGLWYRPSYFPQPGETDWQQSCDR
EVGYVRNAVGVADVSTLGKIDIQGTDAARLLDFVYTNMFSTLKVGRVRYGLMLREDGHVMDDGTTARLGE
DHYLMTTTTAAAGQVMAHLEFVAQGLHPEWDVSICSVTEQWAQFAVAGPRAREVLNGLLDTPIDAAGWPF
MSCGAVSVLGVGGRLFRISFSGEEGYEIAVPARYGASLFDLLVTRVEALGGGAYGMEALNVLRIEKGFIT
HAEIHGRVTAYDIGMGGMVSARKDCIGKTMAQRPGLEEPGRERLVGLKPITAEGTLLAGAHLYRQEDTAR
REHDQGYVTSVCHSPVLGRMIGLGFLADGPDRIGEIVKMVDGLRGVTTYCEVVTPVFFDPEGGRMRG
>gi|56696624|ref|YP_166985.1| sarcosine oxidase gamma subunit family protein [Ruegeria pomeroyi DSS-3]
MTPREGGCVDKLIAKTPCAGQVPLSVGAMTVSEVDLGAMTSLSPRKGQGAALAQALRAAHGLDWPGAGRV
TTAGDARAIWFGHDSVLLTGAAPDAALAGPGVLVDQSDAWTVVRLEGTGAEAVLARLVPVDLRAPGFGPG
ATARCRIGHMAGSVTRLEDGGFLLMVFRSMAQTLLHDLKSAMEAVAARG
>gi|56696625|ref|YP_166986.1| hypothetical protein SPO1748 [Ruegeria pomeroyi DSS-3]
MYRYALVALLAASPLAAAETKQQSCQYQADVVAAIQQARLDRVKERDVPAAVAATSPTWPENYNAAIPLI
APWVYQQKMRDVRDQDLSAAWLELCLKQ
>gi|56696626|ref|YP_166987.1| DNA primase [Ruegeria pomeroyi DSS-3]
MSLPPGFLDELRSRLSLTQVVGRKVMWDMRKSNQGKGDMWAPCPFHHEKSASFHVDDRKGFYYCFGCQAK
GDALTFVQQTENVGFMEAVEILAREAGMTMPARDPRAQEKQDHRSQLAEVMEQAVRFFRLNLSAGGGGAA
RDYLARRGLSAQALERWEIGFAPDGWQGLWDHLRGKGVGEELITGAGLAKPSTKGGKPYDTFRNRIMFPI
RDARGRCIAFGGRAMDPKDNAKYLNSPETLLFDKGRSLFNHGPARTAAGQGQPLIVAEGYMDVIALAEAG
FGAAVAPLGTAVTEHQLQMIWRIADEPIVALDGDTAGLRAALRVVDLALPLLEAGKSVRFAIMPEGKDPD
DLIRAEGPAAMQSVLDQARPMVQLLWQRETEGRVFDSPERKAALDKALREKIKLIRDPSIRAHYGQEIKD
LRWQLFRPQRGTKQPWQPRGGRGAAPAAATAGTRASLLASSGEAAQIRLREAVILAAAIATPAVIVRFEH
ALERLDCHDPDLAMLRDLALRIGIDDPEGLRERIDQTLGPEALENLYALRHVQVIPCMRRPGDVDLAEMT
LAEELAKIQALRGYDAEIEEAREDIAEDADESLTWRVAQAAEEKQRAARSQNEDKALFDVADNGARIKRD
EREAFDAIMAGIDFRRKRR
>gi|56696627|ref|YP_166988.1| RNA polymerase sigma factor RpoD [Ruegeria pomeroyi DSS-3]
MAAKDTAEDQKPEDQEDEVSLDMSQAQVKKMIAEAREKGYITYDQLNQVLPPDQVSSEQIEDVMSMLSEM
GINIIEDEEAEEEEQKGSTDLITTESNREVALAGAQAEKLDRTDDPVRMYLREMGSVELLSREGEIAIAK
RIEAGRNTMIAGLCESPLTFQAITIWHDELLSEDILLRDVIDLEATFGNQLDDEDDEPVVATSAVQAVKP
QREETPEYDADGNPIVTEDDEDEDDQANMSLAAMEAALKDKVLITLERISSDYAQLSEMQDSRISATLNE
DGSFSAHDEATYQSLRSEIVLLVNELHLHNNRIEALIDQLYGINKRVMSIDSSMVKLADQARINRREFID
AYRGRELDPNWLAEMAEKPGRGWQMFIERSSDKVEELRADMAQVGQYVGLDISEFRRIVQQVQKGEKEAR
QAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSI
ADQARTIRIPVHMIETINKLVRTGRQMLHEIGREPTPEELAEKLQMPLEKVRKVMKIAKEPISLETPIGD
EEDSQLGDFIEDKNAVLPLDSAIQENLKETTTRVLASLTPREERVLRMRFGIGMNTDHTLEEVGQQFSVT
RERIRQIEAKALRKLKHPSRSRKLRSFLDQ
>gi|56696628|ref|YP_166989.1| hypothetical protein SPO1751 [Ruegeria pomeroyi DSS-3]
MTGLTKILALAVFLGAGAQAQALTTRMGHRVLPVNDAVFEVVPRGKQRVGDFWCAASEYARRELGAGWND
RIYLVRGRGPSVTTGRKTAVQFSMTPEAVGVTPLENELTTIRTGLKVGDNMTVNQGNSYCEFGPVRP
>gi|56696629|ref|YP_166990.1| hypothetical protein SPO1752 [Ruegeria pomeroyi DSS-3]
MLTEFSISTRGVGLYEFTGEVTRWLAGQGDGLLTLMVRHTSCSLLIQENADPEVQSDLTAYFDRLVPPAD
HPSMRYLRHTYEGPDDMPAHIKAALMPVSLGIPVRAGAPMLGTWQGLYLVEHRRAPHDRRIAAHFA
>gi|56696630|ref|YP_166991.1| transcriptional regulator NrdR [Ruegeria pomeroyi DSS-3]
MRCPFCGNIDTQVKDSRPAEDHVSIRRRRFCPACGGRFTTYERVQLRDLVVIKTSGKREDFDRDKLERSI
RISMQKRPIDPERIDQMISGIVRRLESMGETDIPSKKIGEIVMEALARIDTVAYVRFASVYKNFQAADDF
EDFVHELRPPSPPTEE
>gi|56696631|ref|YP_166992.1| riboflavin biosynthesis protein RibD [Ruegeria pomeroyi DSS-3]
MSMSDARYMALALSLGRRGQGVCWPNPAVGCVIVNEGRIVGRGWTQPGGRPHAEVVALAQAGGAARGATA
YVTLEPCAHHGKTPPCAEALIAAGVARVVAAIEDCDPRVAGNGFEMLRRAGIEVSVGIGEDAAARDLAGF
FLKTELGRPWVTLKLASSFDGRIATASGESQWITGPEARRAVHAMRARHDAVLVGAGTARSDDPSLTVRD
MGVAQQPVRVVVSRYLDLPLMSQLARTARQVPVWLCHGPGVDGDRVRAWEGTGARLIPCAVEAGQISATD
LLRQLGGQGLTRVFCEGGASLAASLLAADMVDELVGFTAGLAIGAEGLPAVGVLGLEQLSEAARFDLIET
RAIGADILHRWQRQ
>gi|56696632|ref|YP_166993.1| capsular polysaccharide export protein KpsC [Ruegeria pomeroyi DSS-3]
MSPSGMNRAAGSDRSRLFVYNGGFLTQRRLRRILTLAGYDIRLGLPSEGDQVGIWGNSPTAHRGLAVAAR
HAAPLLRVEDAFLRSLFPGRAGEPPLGLLLDRAGVHFDPTTPSDLEQLLTSAPLDDTTLLNRARDAMARI
RENHLSKYCATDPDLPLPEPGYVLVIDQTRGDASVTASGGNDALFREMLVFAQEEHPGARVLIKTHPETA
AGFRPGYYGERDISVRVSLYDAPLSPWALLDGAVGVYTLSSQLGFEAILAGHKPRVFGQPFYAGWGLTLD
EHPVPRRERRLTRAQLFAAAMILYPTWYDPFGDKLCELETVLDTLEAQTRAWRQDRAGWTAGGMRLWKRR
PLKRMFGRFGRISFTDTPAAGDPRPHMVWAARAAASDTATRVEDGFLRSRGLGAELVPPLSLVTDDSGIY
YDPTRPSALESLIARRAELRADQRQRAEALIRMLTTARISKYNLGGALPDLPPGHRILVPGQVEDDASIL
TGTGEIRSNLDLLRSVRAAHPQAVIVYKPHPDVEAGLRVGGIDPGTLADVIATQADPMQLLDQVNEVWTL
TSLLGFEALLRGLPVTTLGAPFYAGWGLTRDLGPIPARRQARPDLAGLVHAALIDYPRYWDPRTGQPCPV
EVAAQRLASGAIPHPGPANRLLSKLQGLLATHAHLWR
>gi|56696633|ref|YP_166994.1| polysaccharide biosynthesis/export protein [Ruegeria pomeroyi DSS-3]
MKLIPVRWAKPVLVLAAMSVAASCSLPKVGPNKREIFAGSVQQEGDAFIVAVNDRVTRATAVVPALGFSD
AFKNASPLTSDTIRPGDVLGLTVWENVDDGLLANEASNATILEEVQVDSAGFIFVPYAGRLRASGNTPDQ
LREVITARLEEQTPDPQVQVRRVAGDGSTVSLTGAVGGQGIYPIERPTRTLSTMLAQAGGVTIQPDIAEV
TVIRGNQQGKVWYQDLFNHPELDIALRGGDRILVEEDTRSFTALGATNTQARVPFETQDLSALEAIAQVG
GLISAASDPTGVFVFRNEPAEIAGLVLGRDDLQGAQRMVYVLNLTEPNGLFTARDFVIRDEDTLYVTEAP
YAQWTKTISLISGGLTPLANLQTIAGS
>gi|56696634|ref|YP_166995.1| capsular polysaccharide export protein KpsS [Ruegeria pomeroyi DSS-3]
MPEQAQTRRVFLFLQGPHGPFFHALGRMLRAAGAEVWRVGFNAGDRAFWFHPPSFIPYKGAHEDWPQAFA
DLLERKGVTDIVLYGDTRPIHASAVAAAKARGLGVHVFEEGYLRPYWVTYEREGSNGNSRLMDMTLEEMR
AALALSDLETPLPPSHWGDMRQHIFYGALYHWFVMFTNQGYRRFKPHRDLPVTKEFQLYLQRLLLMPALA
VERMLATARIRNGGFPYHLALLQLEHDSSFQQHSPFSTMTDFLEEIFDGFARGAPQHHHLVVKAHPLENG
RVPLRREVRRLARQHGLEGRVHYVRGGKLAQLLNDARSAVTVNSTAGQQVLWRGIPLKVFGRAVYDKPEF
VSTQTASEFFAAANRPDARAYKEYRRYLLETSQLPGGFYSRKGRRQLLRQVVDMMLSPDDPYDALKSGKA
APRQQLRLVN
>gi|56696635|ref|YP_166996.1| hypothetical protein SPO1758 [Ruegeria pomeroyi DSS-3]
MVAPFLTSYARFSGLASILTGQSGETMTRVGQAGKRGLAARVAGRYLGAGMAQQR
>gi|56696636|ref|YP_166997.1| riboflavin synthase subunit alpha [Ruegeria pomeroyi DSS-3]
MFTGIVTDIGTVVELEQRGDLRARIRTGYDTSGIDIGASIASDGVCLTVIALGPDWYDVEISAETVSKTN
LGGWSVGKRVNLERALKVGDELGGHIVSGHVDGVAEVVAMADEGDSTRVTLRAPADLARFIAPKGSVALN
GTSLTVNAVEGAEFGINFIPHTKEATTWGGVAVGDRVNLEIDMLARYVARLAEAL
>gi|56696637|ref|YP_166998.1| hypothetical protein SPO1760 [Ruegeria pomeroyi DSS-3]
MAGIGHNGGPSMEHGRLWRTHAWRQAQKALMPEAIPMLVLRMRMRRAAELGMTYRTYAKVRQYSGQDILG
LLFSSNALRIFGSGGEIPEAEAQIVTQVAAAARLSLVHPPATPQAVLAANRALAAADRAPHLSDSWAQMR
DRVQGLIHSQRLPSSGVLVIGDAPLEADWAAAGRAAGYLPSAEYFAHQAG
>gi|56696638|ref|YP_166999.1| 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II, putative [Ruegeria pomeroyi DSS-3]
MSFETPGPVEARLRDAISPIEEIIDEARKGRMYILVDHEDRENEGDLCIAAEFADAAAINFMATHGRGLI
CLPMTADRIDRLGLPMMAVNNSSRHETAFTVSIEAREGVSTGISAADRALTVATAINEQNTMASLATPGH
IFPLRAKRGGVLVRAGHTEAAVDISRLAGLNPSGVICEIMKEDGTMARLPDLVDFAERHGMKIGTISDLI
SYRARNDNLVDETARSTVTSEYGGDWEMRIFTDQTHGIEHVVLVKGDISTPEPVLTRTHALHEASDVLGL
GPKPTQELPRAMEKIAAEGRGVVCLFRQPRNALYASDEDGVRTIKQTGLGAQILSKMGLHELILLTDSPQ
TRYLGLDAYGLTIVGTRPILKDA
>gi|56696639|ref|YP_167000.1| riboflavin synthase, beta subunit [Ruegeria pomeroyi DSS-3]
MAGHETHYTLPRPEFDKPVKLLIVVAPYYKDIADNLVAGAKAEIEGVGGSWDLVEVPGALEVPTAIAMAD
RQSNFDGYVALGCVIRGETTHYDTVCNDSSRAIQLMGLQGLCIGNGILTVETRPQAEVRADPGAMNKGGG
AAAAALHLIALGRKWGASRKDVGFRPKADDILLAEDKNGSRTA
>gi|56696640|ref|YP_167001.1| transcription antitermination factor NusB [Ruegeria pomeroyi DSS-3]
MSQSDTPKPVNRKRQMKSAARLYAVQALFQMEHSGQTVESVVSEFLEHRFGAVYEGDELAEGDAALFRAL
VGDAVNNQALIDQMTDRALVAKWPIARIDPTLRALFRAAGAEFSQNDTPPKVVITEFVDIARAFFPEGRE
TSFVNAVLDHMAREARPDAF
>gi|56696641|ref|YP_167002.1| LuxR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MRNVTQFALDLLESLSHIFDDAARWEHAVARLNEFGFKALNMGQFTPKSGILHWARSSMAPNWLKLYAEG
GYSDADLVLAQARQGPESLYIDSGRRLQESNSDTALALYSGLVEHGYRHVFSLIVPCPGNQAMLVALFTD
HPEADSWMTEQSAGMRILATVIGTNLGPGTEHGQSSGQDLTPILGTTAPLSRREREALHLLADGLRNEQI
AAAMKISEVTVRMHLKSARDKLRAPTREAALVRAMQMGLLSDPAYRNR
>gi|56696642|ref|YP_167003.1| hypothetical protein SPO1765 [Ruegeria pomeroyi DSS-3]
MPRLIRLYVTQVLVGFAISAVFIAGLLWLDIAGLRGLIVRSDSALLAVFMLWFMNGIVFAGVQFAWKIMS
LAEDDTPPRGGSKVSDLRPVPVRQEAPAHRG
>gi|56696643|ref|YP_167004.1| hypothetical protein SPO1766 [Ruegeria pomeroyi DSS-3]
MPMTLDLQPGQRLARGVARHLRAHGFVSVEEFVPARGLRVDVMGLGPKGEIWVIECKSSRADFQADAKWQ
GYLEWCDRYFWAVDMEFPAELLPAESGLLIADAYDAEIVRMAPEQKLAPARRKVLIQKFATHAARRLQAL
RDPEGHGIFE
>gi|56696644|ref|YP_167005.1| acetyltransferase [Ruegeria pomeroyi DSS-3]
MDTPVLRLFRPDDAPWLVEQHGVHYARAEGFDDSFGPLVARILDDFIADHDPDRERGWIAEADGQRLGSI
FCVRLDETTAKLRLFLLVPEARGRGLGRRLLDTCMGFARDKGYTQMQLWTHESHRAACALYAATGWQLTD
SKPVHSFGVDLVEQSWKITL
>gi|56696645|ref|YP_167006.1| hypothetical protein SPO1769 [Ruegeria pomeroyi DSS-3]
MTPGPCPYTTPKEGRRITNSGGGQHMAQTQVAADTGRKPFNIVVVGQNNRLQYEAVLFAASLRHSSPGFN
GRLFVAHPQPGPKWDEDPSIQSDEVRAALDTLGAELLPFENKVFGQTYPHGNKIEALLALPEGEPFVFFD
TDTLITGDLMSVPFDFSRPTASLKREGTWPQPTLYGPGYTEIWRALYSRFGLDFESSLDFEQPDEYWKRY
LYFNAGFFYYECPHKFGHRFLTYARSIRDTPLPELICQSLNPWLDQVALPLVIHSFGGGRDCLPEGLLDG
AVSCHYRLFPLLYARESDRVIEVLEEVASPNKIKKVLKNYEPLKKMVYQGKGEKIREMFDRENLPHKEQA
IRNRIKSKGLWLR
>gi|56696646|ref|YP_167007.1| hypothetical protein SPO1770 [Ruegeria pomeroyi DSS-3]
MKGPIQMLDILLFLIAGAAQSGQVEGKTPAPSDSAAVTAPAEAPAAPAFLAPEPKAEAPATPAFLSPAPQ
LVAEPQVPSGKFTTATEVKPILNATRGNWVALRDYNGQDLLYVTHLWSWRCGLAQMSVSINGAAPEIWPL
PPCHAETAAPNAIIDSDGLPFRSYPSGSVAQIAVELIYDDLSADSASFARAQVLMP
>gi|56696647|ref|YP_167008.1| TRAP dicarboxylate transporter, DctM subunit [Ruegeria pomeroyi DSS-3]
MTPILFLVLLFASVPIALVLALTALWYIYDSGNLVLYDSFAQQMFAGVENYGLLAIPLFILTGELMNEGG
MTQRLVHAARVFVGGFRGGLAYINLLANMFMAAIIGSAASQIAVMSRAMVPAMKDEGYDPGFAAATTAAG
GLLAPVIPPSMLFVIYGVLAQLPIGDLFIAGIIPGLIMAGSFFVVVALIGLSQQFPKGEWMTMPQALRAL
RDALPAFLIPLAIVGGILFGIATPTESAAVASLIAFGVGWLVYREIHIRDLGAMFARTATNSSLVIFMIA
AANVFGWVVIYEELPQKLAAFLSTVTSDPFTFLLIVNLCLLFVGMLIDGIAALILITPILLPIAMNSYGI
SPYQFGVVISLNLVLGLLTPPVGVGLYIASAMSGVRPFTIFTALWPFLLAVAVVLVMLSYFPILSTALI
>gi|56696648|ref|YP_167009.1| TRAP dicarboxylate transporter, DctQ subunit [Ruegeria pomeroyi DSS-3]
MPARFTTAEGRHMLYRASHLWASVELVCAAALAASVTGLILLNVVTRAAGNAIYWVDEAAIYAMVWMTFL
AASAAIHFRSAIAVTLVNEMLGSHSARLLERVVDLVLFLFACLMVWICLRWFMPLELMRAGWDVKAFQGQ
TFNFIYAEPTNTLGLPKVWVWLVMPLFTLGALLHSAANLINPGRHPEAEAAQ
>gi|56696649|ref|YP_167010.1| TRAP dicarboxylate transporter, DctP subunit, putative [Ruegeria pomeroyi DSS-3]
MTISFKGLARGVACAALVLAALPAAAKEFRLGLITPPPHTWTKAAEAFGAELSEKSGGAHSVSVFPARQL
GNEAQMLQQLQTGALDMAFMTVAEVSNRVPNMGAFYAPYLAGDINHAAAILRSDTARGMLAVLPQEAGVV
GVGFGSAGMRQILSRGAVNSAADLSGLKLRITPFDPILDFYNALGAAPTPMPLPAVYDALANGQVDAIDM
DVELINVLKYHEHADTILISNHMMFPMVGLISARVYAGMSDADKAMISELMAKHVDSTLDVYMVKEPEWT
DALTKVGKTFKRVDQSFFGDAIAQWETIWADKAPSLPELRKTAADLQ
>gi|56696650|ref|YP_167011.1| 3-hydroxyanthranilate 3,4-dioxygenase [Ruegeria pomeroyi DSS-3]
MARLSAFNFQKWIDEHKHLLKPPVGNQQVWEDADLMVTVVGGPNKRTDYHDDPVEEFFYQLKGDMVLKLY
EGGEFYDVPIREGDIFLLPPHVRHSPQRPQEGSIGLVIEPKRPEGAHDAIEWFCFGCGSLVHRAELLLES
IVRDLPPVYQAFYADEQARTCPNCGEIHPGKEPPEGWVKL
>gi|56696651|ref|YP_167012.1| hypothetical protein SPO1775 [Ruegeria pomeroyi DSS-3]
MLDHLCVNMLSSCPRCASSSGNRASRRYPMRINADFTRRAAVHFDQTDWVPSPAPGVERKMLDRIGAEVA
RATTIVRFAPGSAFSAHTHDGGEEYLVLDGVFQDELGDFPVGSYVRNPPTSSHTPATEPGATILVKLHQF
DPADRTEVRRSINGKSDETLFSDSHEEVRLESWAAGAQVTRDLPGGIEVFVLEGGFQEGGETFSRWDWLR
LPPGARLDLTAGAEGARVWVKSGHLAAMV
>gi|56696652|ref|YP_167013.1| putative oxidoreductase [Ruegeria pomeroyi DSS-3]
MMAQGQMAPGIVAGRLSSEELAANFDDLHPAYAPHEAAVAADRCYFCYDAPCQTACPTEIDIPLFIRQIQ
TGHPEAAARTILEQNILGGMCARVCPTETLCEEACVREAAEGKPVEIGRLQRYATDTLMARGVHPFTRAA
PSGKRVAVVGAGPAGLACAHRLALLGHDVVIHEARPKAGGLNEFGIAAYKATGGFAGTEVDWLLQIGGIT
VEQGSALGQGLTLDALRAGYDAVFLSIGLAGVNALRAAGEDKDGVRDAVDFIAELRQAGDLSALPVGRNV
VVIGGGMTAIDAAVQSKLLGAENVTVAYRRSRAEMGASGFEQDLAASKGVRLMFNVMPVAVHGNGAAVEI
ELEYTTSAGGSVTGTGETVRLAADQVFKAIGQTLEGVPEGLELEGRKIKVDGSGRTSVPGVWAGGDCASG
GEDLTVTAVAEGRDAAMDIHARLSA
>gi|56696653|ref|YP_167014.1| dihydropyrimidine dehydrogenase [Ruegeria pomeroyi DSS-3]
MADLKTNFLGIESPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGSEGPPVVNVNGPRYGAIYGADR
RLLGLNNIELITDRPLETNLEEIARVKADYPDRAVIVSIMVPCEEAEWKAILPRVAETGADGIELNFGCP
HGMSERGMGAAVGQVPEYIEMVTRWCKTYYDKPVIVKLTPNITDIRYPARAARNGGADAVSLINTISSIT
SVNLDNFSPEPSIDGKGSHGGYCGPAVKPIAMNMVAEISRDPATQGLPISGIGGVTTWRDAAEFMSLGCG
TVQVCTAAMTYGFRVVEEMKTGLSQWMDEKGYTSVNDFIGRAVPNVTDWQYLNLNYVAKAKIDQDQCIKC
GRCYAACEDTSHQAISMSEDRVFEVMDDECVACNLCVDVCPIDGCISMVPMQPGETDPRTGKVVQADYAN
WTTHPNNPMARAAE
>gi|56696654|ref|YP_167015.1| hypothetical protein SPO1778 [Ruegeria pomeroyi DSS-3]
MQTLPHPDQARRWLEQIFATRAVQRGAVVRRSIAWVDREVGKERFLTEMRRRNFHVIETADQFVVVCHNG
PIRLLF
>gi|56696655|ref|YP_167016.1| major facilitator transporter [Ruegeria pomeroyi DSS-3]
MVRQLLPVSALLLGSALLLFAGGMNSLILPIRGAQEGFSASALGLLGTGWALGYVAGCFYTPRLVGKVGH
VRAFSVMSGIAAVAVLLSLLLLTPWTWIPLRAMSGFCFAGAAMIVESWLSERAEPSTRGRIFGLYTMVNL
GASTAGQLVLTMGDTTGFMFFVLPAIFYCLALMPTAMSSKTVPKPLVSVRLDLMALWRNSPVAVIGVLCV
GVSNSAFGTLSAVYADGIGLALTTVALFASLPVLAGAVSQIPIGWLSDRLDRRAVLIGVAVLALAVDTIF
IVLSPETRMLNLVLASLFGAAIYAMYPIIIAHANDHAAADQAIQVSGGLLMLYGLGSILGPLLAGFGMET
LGGTGLFMTSAGAHVLLILFSGLRILLRAPVAEADKSSFVPAPAGRATTPETAALASAESDEVDEDEEET
PSPDAG
>gi|56696656|ref|YP_167017.1| TetR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MPQDRAPTRIQKKNRAAILDAALNVFSAHGFRGATVDQIAAEAGLSKPNLLYYFPSKEAMHEALLAELLD
TWLDPLRALDEQGEPLTELLAYVHRKLEMSRDYPRESRLFANEIVQGAPRIYQALSEDLKVLVDDKVALL
EGWMAAGRIARVHPYHLLFSIWSLTQHYADFDVQVRAVLGDEDPFDGADVFLDTLYRRLLSPRPD
>gi|56696657|ref|YP_167018.1| allantoate amidohydrolase [Ruegeria pomeroyi DSS-3]
MAAPAQNLRINVDRLWDSLMEMAQIGPGVAGGNNRQTLTDEDGEGRALFQKWCEAAGCSMGLDQMGNMFA
MRPGTDPDALPVYVGSHLDTQPTGGKYDGVLGVLAGLEVIRTLNDLGIRTKHPIVATNWTNEEGTRFAPA
MLSSGVFAGMHTQDWAYARTDAEGKSFGDELSRIGWRGEEEVGARKMHAFFELHIEQGPILEAEGKDIGV
VTHGQGLSWTQVTITGKDAHTGSTPMPMRRNAGLGMARVLEKVDEIALSHAPHAVGAAGHIDVYPNSRNV
IPGKVVFTVDFRSPDLSVIEDMEARLRVEGQKIADAMGLEVAFEKVGGFDPVAFDEGCVSAIRNAAERLG
YSHMNIISGAGHDACWINRVAPTAMVMCPCVDGLSHNEAEEISKDWAAAGTDVLFHAVVETAEIVE
>gi|56696658|ref|YP_167019.1| hypothetical protein SPO1782 [Ruegeria pomeroyi DSS-3]
MLPDTATLRKRIRAAIEADLSDAPVDAVGRATLRDFAAMRQEPEAVEVQFSGGVMGQGWAVTRPNGPYLV
VYLPQAGCFSLCVEGPFGPLDIGVHGNAIGCFGSV
>gi|56696659|ref|YP_167020.1| phenylhydantoinase [Ruegeria pomeroyi DSS-3]
MSTVIRNGTVVTADLTYKADVRIENGVITEIGPGLSGDKELDATGCYVMPGGIDPHVHLEMPFMGTYSSD
DFESGTRAGLAGGTTMVVDFCLPNQGESLLDAIKRWDNKSTRANCDYSFHMAVTWWGEQVFNDMKTVIET
RGINTFKHFLAYKGALMVNDDELFASFNRLAELGGIAMVHAENGDVVAEMTAKLLAAGNTGPEAHAYSRP
SQVEGEATNRAIMIADMAGVPLYVVHTSCEEAHEAIRRARMQGKRVWGEPLIQHLTLDESEYFHPDWDHA
ARRVMSPPFRNKQHQDSLWAGLQSGSLSVVATDHCAFTTEQKRYGVGDFSKIPNGTGGLEDRMPMLWTHG
VATGRLTPNEFVAVTSTNIAKILNCYPKKGAVLVGADADLVVWDPEKSKTISAGSQQSAIDYNVFEGKEV
KGLPRFTLTRGQVAVHDGEIRTQEGHGKFVAREANTPVNRALSSWKELTAPRPVERSGIPATGV
>gi|56696660|ref|YP_167021.1| hypothetical protein SPO1784 [Ruegeria pomeroyi DSS-3]
MPDQMPDTCQKLRLGETYAGKQGFDYFQGIARETTGARSICMHMLRIPPGGRAKAHLHAEHETAIYVIEG
SAVMYWGHALEHKMETNAGDLIYIPAGVPHLPINTGKSEAVAILARTDPHEQESVVLLPELDALVPE
>gi|56696661|ref|YP_167022.1| ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MNGTGQQPELSSVVSAKGLDLTFQTNDGPVHALKDVNLEINKGDFVSFIGPSGCGKTTFLRCIAALETPT
GGSLTVNGMTPDEARRKRAYGYVFQAAGLYPWRTIAKNIKLPLEIMGFSRQEQEERVRKVLELVDLAGFG
GKFPWQLSGGMQQRASIARALAFDADILLMDEPFGALDEIVRDHLNEQLLALWARTGKTIGFVTHSIPEA
VYLSTKIVVMSPRPGRITDVIESPLPKDRPLDIRDSAEFIEVAHRVREGLRAGHADD
>gi|56696662|ref|YP_167023.1| ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MEPEFGSNSGPISLQEIGVARAGRDSMKSLLAVLTVLAVIVGLWYAACVPMNIHGVLVAAERGGAVVEPA
DGAARRGMSGVSLALKNRFAVPETWAQERPRLPAPHQVAIELWDTTVMKKITSKRSLVYHGWVTLSATLL
GFGIGTVLGVLLAVGIVHSRVMDMSVMPWAIVSQTIPIIALAPMIIVVLYSVGVQGIIPKAVISAYLSFF
PVVVGMVKGLRSPDAMQLDLLRTYNASQGETFWKLRLPASMPYLFASLKIGIAASLVGAIVGELPTGAVS
GLGARLLAGSYYGQTVQIWSALFGAAILAACLVGLLGVIERLVLKRMGMA
>gi|56696663|ref|YP_167024.1| ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MGTEEGLGGARMMLVLVALLVWGAAWWLNTRLAEGPQAGTRPVRLAVPLIFGATILVVWELVVRGLEVPL
VILPAPSLIAARFAGSLPILWADFVQTFVKGALSGYLIGCGAAFVMAVAVDRSEFLRLGLLPVGNFVAAL
PIVGTAPILVMWFGFDWQSKAAVVVVMVFFPMLVNTVAGLRETTAMQRDLMETYAASYWQSFFKLRLPAA
MPFIFNGLKISTTLALIGAIVAEFFGSPTLGMGFRISTSVGQLALDMVWAEIVVAALAGTLFYGLVALIE
HHVTFWHPSQRR
>gi|56696664|ref|YP_167025.1| ABC transporter, periplasmic substrate-binding protein [Ruegeria pomeroyi DSS-3]
MSPFGTLPKGVRLIPYPTRSRTEPGQRNRQPTRSEIMKKLMNGAALALALAAGPALAADEVKLQLQWVTQ
AQFAGYYVALDKGFYDEEGLDVTILPGGPDIAPPQVLAGGGADAMLNWMPSALAAREKGLPVVNIAQPFK
SSGLMLTCWKDTGITGPQDFKGKTIGVWFFGNEYPFLSWMSQEGISTDGGADGVTVLKQGFNVDPLLQRQ
ADCISTMTYNEYGQVLDAGVSEDELVTFKYEDMGVATLEDGIYVLEDNLKDEAFKDKMTRFVRASMKGWK
YAEANPDEAAGIVLDNDATGAQTEAHQVRMMGEIAKLTAGSNGALDPADFDRTVGTLLAGGSDPVITKTP
EGAWTHEITDAALK
>gi|56696665|ref|YP_167026.1| sulfate/tungstate ABC transporter permease [Ruegeria pomeroyi DSS-3]
MQSFAQEMQAAFTLILAGDSELLGIVALSLRVSLLAVLFAALIGMPLGAALAVGRFPGRRALVVLVNALM
GLPPVVVGLLVYLMLSRSGPLGVLQLLYTPTAMIIAQVVLVTPIIAALTRQVVEMLDAEYAEQMRSLGLS
RLATVPVLLWDGRVALLTAVLAGFGRAIAEVGAVIIVGGNINHVTRVMTTAIALETSKGNLALALALGAV
LIGIAIAVNALVSLLGARSRAEVMAHA
>gi|56696666|ref|YP_167027.1| sulfate/tungstate ABC transporter ATP-binding protein [Ruegeria pomeroyi DSS-3]
MRDLVEESGLMIEAQGLRIARGGQRLLDVAHLRLGGPGPTVILGPNGAGKSLLLRCLHGLIGADVGAVRQ
NGRPLDGDERARQAMVFQRPVMLRRSVAGNLDFVLRRRGLARRQRQDRIADLLAEGGLQSRGGQSARSLS
VGEAQRLAILRALATEPEVLFLDEPTSALDPGATQAIEALVLRASTRGVRIVMVTHDIGQARRLAADVVV
MMGGQVVEQGPAAQVLDDPANGAVRRFLAGELIF
>gi|56696667|ref|YP_167028.1| sulfate/tungstate ABC transporter periplasmic substrate-binding protein [Ruegeria pomeroyi DSS-3]
MIGSVFRMGALVLGLMAGSLAQAGDFIVVQSTTSTQNSGLLDHILPAFEAETGIEVRVVAVGTGQAIRNA
ANGDGDVLLVHAKAAEEKFVAEGWGVERFDVMYNDFVLVGPASDPAGVRGGSDIVAALSAIAGAEAPFAS
RGDDSGTHKAELRHWASAGIDVSAASGGWYRETGSGMGATLNLAAGMGAYALSDRATWIAFGNKGDLVVA
VEGDARLFNQYGVILVNPAKHPGVKAEAGQRFIDWLTGDEGQAAIAGYTLDGQQLFFPNAK
>gi|56696668|ref|YP_167029.1| excisionase family DNA-binding protein [Ruegeria pomeroyi DSS-3]
MAEFLTTRELADLLRIGERKAYDLAASGEVPHVRAMGKLLFPRAEVLAWLNASRAGPRVAEPPLPPILAG
SHDPLLDWALRESGAGLATYYDGSFDGLTRLKERKAQAAALHIREADGFNTASLRDALGEAPVVLIEIAR
RQRGLLLAPGVSGITGLADLRGRRVAMRQSSAASQHLFLAELENLGITPADLAPDPACARTEEDLAMLLQ
SGKAEAGFGLGALASPHGLGFLPTHEERFDLAIWRRAAFDPPMTRLMSFLRGPAFATRATEMGGYDLSGL
GTVHHNGASG
>gi|56696669|ref|YP_167030.1| WD domain/cytochrome c family protein [Ruegeria pomeroyi DSS-3]
MGARAPFAVAGRGEIGRGQQGQAQPGGMMRALALALLLWPACAAAEFFTLKGHGGPVMGIAVGPEGQIAT
ASFDNSVGLWTGRAPHWFEGHEAAVNTVAFQGGVLYSAGDDFTLRRWPEGTILGRHKGKITGLALSETLA
ATASWDGTIGLWPLDSRAPRSLDAASGVNAVAFSPDGTLLYSAGMDGVLRLWDVASGSELRQITRHGFGI
NEIVLNDADGWLAYGAVDGVTRILDLATGAERDFTLDRRPVLALALSPDRSQLAVGDGEGYIMVIDTASW
RIARDFRATLRGPVWALAFSPDGANIHAGGIDDTMYSWPVASLSEHGKMASGERSFLKDPDQMDNGERQF
ARKCSICHALTPEGGRRAGPTLYRVFGRRAGTLPGYLYSDTLAGSDIVWTEESINSLFDLGPDHYIPGSK
MPMQRITGAQDRADLIAYLRRATLAKESP
>gi|56696670|ref|YP_167031.1| formate dehydrogenase, gamma subunit [Ruegeria pomeroyi DSS-3]
MPVLRLLICLLCLALPAVAQEGAPDRSATGGATTLEDILARQRGEKVDDAYRATDTGSQTAPLEAQLGVR
GGASDSEIFRALRYGAADVTVSARGPAADVIIQDDGMWWLSLREGALRDYGTYALAGMIVVLALFYLLRG
RIRIDGARTGRSVTRFAAFERFGHWLFAGSFLVLAVSGLITLYGRDVLIPLLGKEAFATLALACKWVHNN
IAWAFMIGLAIVTVNWIAHNIPNRHDLKWLAVGGGLFSKGLHPPAKKFNAGQKIIFWLCILLGLSISLSG
LSLLFPFEMPMFAKTFALANATGLPQAMGLSLPEVMTPHQEMQYAQLWHLIVAFAFITIIIAHIYLGSLG
MEGAFDAMGSGEVEEQWAREHHSLWLDEVKSAEASKARPSPAE
>gi|56696671|ref|YP_167032.1| formate dehydrogenase, iron-sulfur subunit, putative [Ruegeria pomeroyi DSS-3]
MARAKFLCDAERCIECNACVTACKNEHEVPWGINRRRVVTINDGKPGERSISVACMHCSDAPCMAVCPVD
CFYQTEDGVVLHSKDLCIGCGYCFYACPFGAPQYPQAGNFGSRGKMDKCTFCAGGPEETHSTAEFAKYGR
NRIAEGKLPICAEMCSTKALLAGDGDVVSAIYRERVVARGFGTGAWGWGTAYDQKGG
>gi|56696672|ref|YP_167033.1| formate dehydrogenase, alpha subunit, putative [Ruegeria pomeroyi DSS-3]
MLRKKTNGVARRPQRNSILSQVGDSHVDRRAFLRGSGLAIGGLAAISATGGTVTQASAQTAAGSAVETVK
SVCTHCSVGCTVVAEVKNGVWIGQEPGWDSPFNLGAHCAKGASVREHAHGERRLKYPMKKEGGEWKQISW
EQAIDEIGDGMMKIRAESGPDSVYWLGSAKHNNEQAYLFRKFAAYWGTNNVDHQARICHSTTVAGVANTW
GYGAMTNSYNDIHNSKAIFIIGGNPAEAHPVSLLHVLKAKEQNNAPLIVCDPRFTRTAAHADEYVRFRPG
TDVALIWGILWHIFENGWEDKEFIRTRVWGMDQIKAEVANWTPEETERVTGVPGSQLKRVARTMANNRPG
TVIWCMGGTQHTNGNNNTRAYCVLQLALGNMGTSGGGTNIFRGHDNVQGATDLGVLSHTLPGYYGLTAGA
WAHWARVWGEDLDWLKGQFASIKDKDGKDKPLMNESGIPVSRWIDGVLEDPANMDQDNNVRAMVLWGHAP
NSQTRGPEMKTAMEKLDMLVVIDPYPTVSAVMHDRTDGVYLLPACTQFETRGSVTASNRSLQWRDKVVDP
LFESLPDEVIIAKFANKFGWADRLFRNIEMDDAETPNVESITREFNAGLWTIGYTGQSPERLKSHMANQH
TFDRTTLQAVGGPNDGEYYGLPWPCWGTAEMGHPGTPNLYDMSKPVAEGGLCFRARFGVERDGDNLLAEG
VSNPGAEIQDGYPEFTMQMLMDLGWDGDLTGEERAAIDAVAGPKTNWKTDLSGGIQRVAIKHGCAPFGNA
KARAVVWTFPDPIPLHREPLYTNRRDLVADYPTYEDRHAYRLPTLYASIQKNDFSKDYPIILTSGRLVEY
EGGGEETRSNPWLAELQQDMFVEINPRDANNLGIRDGQQVWVEGPEGGKVKVMAMLTERVGAGVAFMPFH
FGGHFQGADLREKYPKGADPYVLGEASNTAQTYGYDSVTQMQETKATLCKISAA
>gi|56696673|ref|YP_167034.1| twin-arginine translocation pathway signal sequence domain-containing protein [Ruegeria pomeroyi DSS-3]
MSKKTREDGASRRDFLKLAGTAAPAAVAAAALGSEAEAAALPTDETRLQDTAHTRAYLDSARF
>gi|56696674|ref|YP_167035.1| chaperone TorD [Ruegeria pomeroyi DSS-3]
MTRTETAPAPISDEDRLRADFYNFLGLLLSAPPDQLLLDQIAGLSGDETDLGQAIGALARVARVTKPAAA
EREFNALFIGLGRGELLPYASYYLTGFLNEKPLAQLRQDMAARAITRAPNVFEPEDNIASLMEMMAGMIV
GRFSTPAPLADQRLFWSRHIGPWAGHFYSDLEGAEASVLYASVGAAGRVFMEIEREAFRMTAA
>gi|56696675|ref|YP_167036.1| hypothetical protein SPO1799 [Ruegeria pomeroyi DSS-3]
MSARGDFWSRRRAGVAAEERAETAALELRARAEAQAELEQQDDAEILARLDLPDPDLLQPGDDVSRFMSE
LVPDRLRRRALRRLWRLNPVLANVDGLVDYGEDFTDATRVIEGLQTAYQVGRGMLRHVEALAAQAEAEAA
PEPDTDTPDLPTEEPLAMAATEAAPAAEAGNEAVPLRDPEAPAPPDATHPEGDTTAPPAPRRMRFTFEG
>gi|56696676|ref|YP_167037.1| iron-sulfur cluster-binding protein [Ruegeria pomeroyi DSS-3]
MTETLILCDCGGSQTLDREQIASGCGASCSRVFRALCTDEIARAAELMQAGDVVIACGQEQAVFTDLATE
LGVETPGFVDLRDRAGWSEQGAEAGPKMAALAAEALMPVAPPPAVDVISEGSCLIVGPADVACDLAEQLA
GPLAVTVLLDAGDPPLSRAYDVVAGRLTRVEGALGGFRLRIDGFRQLIPGGRGAFAFGPPRDGAISACDI
VIDLTAGTPLVPAPDKREGYLRADPRDPLAVARLALEAVQLTGTFEKPLYVRLDESLCAHSRAGQRGCSN
CLDICPTGAITSAGDHVAIDPMVCAGCGACAALCPSTAITYEAPTVATLLARMQRLARAYRAAGGAAPRL
LVHDAHGGEMIRLAARFGRGLPADVIPLELGTVSGLGHAEMLAALAHGFASLSVLMGPRTERDALIRELA
LAEAIGGQGRLELLDFADPDALSDHLYEAPVPEALATPVLPLGNRRQITRLAAQALNPGGPVLDLPQGAP
YGAVAVNTDACTLCLSCVSLCPSGALIDNPDLPQLNFQEDACLQCGICRTICPEQAITLVPRLDLSDAAL
GQRVLNEEEPFACVECGALFGVRSTVERIMEKLAGTHPMFAQSAQARMIQMCDDCRVGAHFAQENNPLSS
NPKPRTVTTEDYFTKRKDH
>gi|56696677|ref|YP_167038.1| hypothetical protein SPO1801 [Ruegeria pomeroyi DSS-3]
MRHALLCLSLLAFATPCNAQEAIGLASPEVLTRSGLLQHILPRFSLKTGIRVVADPVGPMRLVSEGDGTR
VFRQGDTVYLLQIEAEPRQERFRDWLRSEIGQRTIESFTPSEGPAFVALRDEAAAVETVDFEGDAALGAS
LAQGKCGRCHVTGAENRMKGIGSTPSFAVLRSLPDWDARFQQFYVLRPHPAFTQIPGVTAPFDAERPPPI
HPVTVTIDELEAILAFVAATGAADLGAPLIVK
>gi|56696678|ref|YP_167039.1| hypothetical protein SPO1802 [Ruegeria pomeroyi DSS-3]
MGYRRDRAMSGDYNMSMRKFLKQVGVTGQQAIEEGLRKAGSPEGGAFRARMVLTIEGLDVSHEVTGLIKD
GDA
>gi|56696679|ref|YP_167040.1| Mrp/NBP35 family protein [Ruegeria pomeroyi DSS-3]
MSLREAVLANLKKITDPVSGQDIVSAGIVRALNVEGDTVRFVIEIDPKLAERMEPVRAAAEKAAQMVEGV
AKVSAMMTAHSDKAPPELKPRAKAAPQGPQPVAGVDRIVAVASGKGGVGKSTVSANLACALAAEGRRVGL
LDADVYGPSQPRMLGVSGRPASPDGKTILPLRNHGVTMMSMGLMTNEGQAVVWRGPMLMGALQQMMNQVQ
WGGLDVLIVDLPPGTGDVQLTLSQKFAVDGAIIVSTPQDVALIDARKGIDMFRQLKTPILGMIENMSTHI
CSNCGHEEHVFGHGGVAAEAEKLGVPLLGEIPLHLDIRVAADGGAPIVVSKPDSPQAEAFRRIARDLIAK
GQA
>gi|56696680|ref|YP_167041.1| hypothetical protein SPO1804 [Ruegeria pomeroyi DSS-3]
MSTPTFPPLMQGVAAQGGDAPFERAQAQAALGCDGGTVVHSVQADRLRAALVLAPEVALADAMAMLPLCA
VGFQNALGALAPPEVAVHLDWAGDIHVNGGRCGRLCVAASTRDPQVQPDWLVIGLDLALLPTSDMPGAHP
DETALYEEGCADVTAVTLLESWTRHVMTWINRWEDEGNAPLHAEWMGLARGVGEEVTRANCTGTFLGVDE
KFGMLIRTGADTRLIPLTALLEDPS
>gi|56696681|ref|YP_167042.1| hypothetical protein SPO1805 [Ruegeria pomeroyi DSS-3]
MNLARAIHFDESDLRVFHSPARTGEWCISGGFEFSNWSGADLEGKARQAFANGWLGLETFGRVTFVAVTR
IEEGEVAALAENLARHFVSHYGAPSIEAALEVARGEIAQMADLCEGHDPNTLLTVARDLSEAGVREAYRT
IQPQEAELDLLAVHVTPDE
>gi|56696682|ref|YP_167043.1| flavin reductase domain-containing protein [Ruegeria pomeroyi DSS-3]
MTETTFTPGPDSARAFRDALGCYGTGVTVITAQSTHGPAGITANSFASVSLEPALVLWSLANDSARFGTF
ANTRHYAIHVMAEGQHAIAQRFALDGLDFDGVDWAPGLNGVPTLVGALARFDCEIQARHPAGDHLILVGQ
VLRATHRPGKGLMFKRGQYGGFTDLL
>gi|56696683|ref|YP_167044.1| DNA polymerase III epsilon subunit family exonuclease [Ruegeria pomeroyi DSS-3]
MLTGLSLRLRIFLFFCLLAAGGLAVVLGALWLAYSRAGTPELLDAFVLAALSAGFGLLALVAGVWLLFDE
NIAKPIERLSASMRARAHAGVAGDLDLHAARYLGDLAPAAAGLAGQLSSSAMDTAAAVASETAHLAAETA
RLTALLTEIPVAMLLANPAHQIVLYDGQAAGVLAQIAHPRLNASLFDYFQRAGLERAYARLVKTGLEQSC
TLTGTDGAQSYQARMKPLGDAPGYMLILDEASSRIAPEAARPLVYDFDLLNQPAEAALEARALDSLVFAV
FDTETTGLLPHKDEIVQIGAVRVVKGRIVPGERIDQLVDPGRPIPPASTRVHGVSDAMVAGAPDIVAAAR
QFHQFARDAVIVAHNAPFDIAFLRRHGPRCGLDWDHPILDTVLLSAVLFGASETHTLDALCDRLGVTIPA
PLRHTALGDAQATAEVLCRMLPMLRARGLDTFGAVISETRKHGRLIEDLN
>gi|56696684|ref|YP_167045.1| hypothetical protein SPO1808 [Ruegeria pomeroyi DSS-3]
MAPWKAGGEEAMFLELIGTLVAGLAMAGVVMALNRLLGGRLPRWLAPVAAGCGMIGVTIASEYGWYSRTR
AALPEGMVVIETVESRALYRPWTYLVPYVDRFAALDSTSLKTHPGQPGQRLFDLYFFGRWAAVNRLPVLV
DCDSLRRASLADGAEFAADGSVAGADWRRPPAGDPVIQAACEV
>gi|56696685|ref|YP_167046.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain-containing protein [Ruegeria pomeroyi DSS-3]
MPLTPDQITRFLKSVHPYDALPLEELERIATRLDAWEVERDFAVYDLGEKLPGLFIVYEGQIEIRDENGA
VVSHLGLRNSFGERGLMRDGHAVTSARADAHSVLLVLPPDLFSDLMAAHPVVAKFFNRARAPRPQVQSLA
TSRVETLMARDPATCAPDTTVQAAAQEMRARSISSLCVCEDGALVGILTQRDLSGKVVAEARSPDTPVDQ
VMTPAPLTLAPSAIGSDVLHAMMERHIGHIPIVEAGRLVGMVTQTDLTRFQAVSSAELVSRLARATSAAE
MAEVTAEIPRLLVQLVAGGNRHEVVTRLITDIADTATRRLLALAEEKLGPPPVPYLWLACGSQGRQEQTG
VSDQDNCLMLDDAVTKAQMPYFGELAQFVCDGLNTCGYVYCPGEMMATNPRWCQPVRVWRDYFRGWIAKP
NPEAQMLASVMFDLRPIGGHQALFTDLQAETLRAARANSIFVAHMISNSLKHTPPLGLLRGFATIRSGEH
RNTLDLKHNGVVPVVDLGRIYALQGELTEVGTRARLEAAEAAGVLSASGGRDLKDAYDLIAETRLEHQAA
LVRRGEAPDNYLAPTSLSDFERSHLRDAFVVVKTMQSAVGHGKGMLS
>gi|56696686|ref|YP_167047.1| sodium/solute symporter family protein [Ruegeria pomeroyi DSS-3]
MDQFTINLLFVGASFALYIGIAIWARAGSTSEFYAAGRGVHPVMNGMATAADWMSAASFISMAGLIAFVG
YDNSTFLMGWTGGYVLLALLLAPYLRKFGKFTVSEFIGDRFYSSTARLVAVICLIVASVTYVIGQMTGVG
VAFGRFLEVSNTTGLLIGACVVFAYAVFGGMKGVTYTQVAQYVVLIMAYTIPAVFISLQLTGNPIPGLGL
FGEHTASGEPLLAKLDAILKELGFSEYTTHNGDTFNMVLFTLSLMIGTAGLPHVIMRFFTVPKVSDARWS
AGWALVFIALLYLTAPAVGAMARLNITDMFWPNGTDGEAVTIEQIETDPRYDWMANWQKTGLLGWEDKNG
DGKIQYYNDKSDAMAAKAAEKGWAGNELTNFNRDILVLANPEIANLPGWVIGLVAAGGLAAALSTAAGLL
LAISSAVSHDLIKGSINPNISEKGELLSARIAMAVAIGVATYLGLNPPGFAAQTVALAFGLAAASIFPAL
MMGIFSKKINNSGAVAGMLAGLVVTLLYIFLHKGWFFIPGTNSFTDADPLLGTVKSTSFGAIGAAVNFGV
AYLVAGMTKETPQEIKDLVESVRIPRGAGAAQDH
>gi|56696687|ref|YP_167048.1| hypothetical protein SPO1811 [Ruegeria pomeroyi DSS-3]
MADHSTTSAQASDAQAGYWKANVRIILISLVIWALVSFGFGIVLRPMLSGIAVGGTDLGFWFAQQGSILV
FLALIFFYAWRMNKLDAEFGVDEE
>gi|56696688|ref|YP_167049.1| adenylate kinase [Ruegeria pomeroyi DSS-3]
MTTPAVLILLGPPGAGKGTQARMLEEKFGLVQLSTGDLLRAAVAAGTPAGKQAKAVMEAGDLVSDEIVIA
ILRDRLAEPDCAKGVILDGFPRTTVQAEALDTLLSESGQRINAAISLEVEDGEMVTRISGRYTCGGCGEG
YHDTFKQPAEAGKCDKCGGTEMKRRADDNAETVASRLEAYHAQTAPLIAYYDGHGVLQRIDAMGEIDEIA
QGLATIVKGAMA
>gi|56696689|ref|YP_167050.1| acetyl-coenzyme A synthetase [Ruegeria pomeroyi DSS-3]
MSPAAQTETKLYAPSADTVARAHVNADTYDRMYAASMADPEGFWAEQGKRVDWIKPFTQVKDVNYNFGEV
SINWYADGTLNVAANCIDRHLATRGDQTAIIWEPDSPTEAAKHITYKELHGSVCRMANILESLGVRKGDR
VVIYLPMIPEAAYAMLACARIGAIHSIVFAGFSPDALAARVNGCDAKVVITADEAPRGGRKTPLKSNADA
ALLHCKDTVKCLVVKRTGGQTTWIADRDFDYNEMALEASDYCAPAEMGAEDPLFILYTSGSTGQPKGVVH
TTGGYLVYAAMTHEITFDYHDGDIYWCTADVGWVTGHSYIVYGPLANGATTLMFEGVPTYPDAGRFWEVC
AKHKVNQFYTAPTAIRALMGQGTSFVEKHDLSDLRLLGTVGEPINPEAWNWYNEVVGKGKCPIVDTWWQT
ETGGHLMTPLPGAHATKPGAAMKPFFGVVPVVLDPQSGVEISGNGVEGVLCIKDSWPGQMRTVWGDHERF
QKTYFADYKGYYFTGDGCRRDAEGDYWITGRVDDVINVSGHRMGTAEVESALVAHAAVAEAAVVGYPHEI
KGQGIYCYVTLMNDREPSDELMKELRSWVRTEIGPIASPDVIQWAPGLPKTRSGKIMRRILRKIAENDFG
SLGDTSTLADPSVVDDLIANRAGK
>gi|56696690|ref|YP_167051.1| TRAP dicarboxylate transporter, DctP subunit, putative [Ruegeria pomeroyi DSS-3]
MMNKMLSGAVAAALTVSFVGEAGATEWNVSVWGKRRAFTEHVEKLAELVSEKTGGAFTINVSYGGLSKPK
ENLDGISIGAFEMAQFCAGYHADKNRAITVLELPFLGVNTLAEEVAVSNAVYAHPAAQQEMAQWNARLLM
TSPMPQYNLVGTGAPRDELAEFEGMRVRATGGLGAAFSAVGGVPTSVPATEAYNAMESGVVDTVAFAQHA
HLSFGTINKADWWTANLNPGTVNCPVVVNIDAYEALSDDERAALDSSVDEAIAHYLTNYGALLKKWDDVL
AEKGVEKVMISDAVLEEFRAKVAGPISAKWVEDMTAQGLPGQELLDLVHATLKAARGS
>gi|56696691|ref|YP_167052.1| TRAP dicarboxylate transporter, DctQ subunit [Ruegeria pomeroyi DSS-3]
MAGHASVLQDGSALSRLDRALLRLERGLALISGLAVFSLMLLAVVSVGGRNAMNAPLPGYVDWIEQAMPL
IAFMGIAFVQREGGHIRMDLVIGQLKGRALWLFELVSVLLILGLMMLLVWGSWAHFLRAFDMGAPLWSRD
SSIDIGIPLWPSKLLAPVAFSVLCLRLGLQVWGYGRAFVLGLEAPVAVPLIQDVAAQAAAEAEQLAGHDN
G
>gi|56696692|ref|YP_167053.1| TRAP dicarboxylate transporter, DctM subunit, putative [Ruegeria pomeroyi DSS-3]
MTMDSIDIGLWVTGGLLVLVLTGMRVAFAAALAGLVGLVWIFWAKFGYDPDRFGKALTVAVKTAGQVPHS
KVSSQALSLIPTFILIGYLAYYAGLTRALFEAAKRWMAWVPGGLAVSTVFATAGFAAVSGASVATSAVFA
RIAIPEMLAIGYNKRFAAGVVAAAGTLASLIPPSAILVIYAIIVEQDVGKLLLAGFVPGAFSAVIYVALI
VGIAVVFKSVGPPVTGFTWRQRFASLPGALPIVFVVVIIISFVYNPFGGDAWGTPTEGGALGAFVVFCMA
VFRGMKWAEFKSALLETAKLTVMIFTIIWGVLIYVRFLGFADLPGAFSDWITSLQMSPMLILVCILLAYA
VLGMFMDAIGMLLLTLPVVYPAVMALNGGEAVSAADSAFGMSGPMCAIWFGILVVKMAEFCLITPPIGLN
CFVVAGVRPDLSVQDVFRGVMPFFVADAVTIALLVAFPQIVLWLPTLAG
>gi|56696693|ref|YP_167054.1| hypothetical protein SPO1817 [Ruegeria pomeroyi DSS-3]
MQIETVIYVLLGGLAGGFVNGLAGMGTSLFALGFFLVVLDPVSAVALTALLAVLAGVQGLWISRAVLSSD
PRRWLRFTLPGILGVPLGLMLLDWVDPAVLRRIIAAVLVLYGGYFGLRRSLPRLEGQYRWVDRALGFVGG
ILGGFASLSGVLPTIWLSMRAWPRAETRAVLQSYNFSILLFTVAGLALRGAYEAQVWVAFAVVLPAGVLA
AQAGIFAFRRITDAQFQRLLVLLCLCLGLGMLARELLAG
>gi|56696694|ref|YP_167055.1| hypothetical protein SPO1818 [Ruegeria pomeroyi DSS-3]
MSGAGPSGTRKRGAMTTFDLMLFACAVLLLAGTIKGFIGLGLPTVSLALLTLGTDPRMAITLILMPMLLS
NLWQMGRGGSLAALIRRYGRFALVLGLSVGLTAWFSRDAGDRLLTGALGAILLLYALLDSLRRVPPLPDR
HAGLIEVIWATLTGVIGGLTAGWGGPMAMYLSARRAPRDEFVQASGLLIAAGSLPLMLSYLAAGHADPRG
LGLSALLLVPTFVGFALGERLRHRADPALFRRALIVLFVVLGANLIWRALSG
>gi|56696695|ref|YP_167056.1| phosphodiesterase [Ruegeria pomeroyi DSS-3]
MKLVHISDIHLTRPGERMGGLDPHKRLAQALAHVAAHHGDAARVVITGDLAHWGERAAYASLRAALGEVG
PPVRLLIGNHDNREAFVSVFPDHPRDDQGYINHAETLDGLRLIYLDTVGVRSHAGHFGPERLAWLEAELA
GCARARIFLHHNPMELGLPAEDRIALIPEDRAPLRALLTRFAGRIEYLHFGHVHAPVHGSWCGIPFAAVP
STGNQSLPDLKEPDLLQGAPMAPAYNVVLIRGRETIIHQIPFTWDGPVFTAGTAWEDWAKPVAAK
>gi|56696696|ref|YP_167057.1| sugar ABC transporter, periplasmic sugar-binding protein [Ruegeria pomeroyi DSS-3]
MKPTATALALALSASAVFAQDKVTIEFAYPYSHLFDVTYQAMMPAFEAAHPDIEVKFRATYESYEDGTNT
ILREAVSGNLPDVTMQGLNRQQILVEKGIARSLAPFIAKEADFETEGYHQAMLSLSTFDDAVFGLPFSVS
LPVGYYNMDILKAGGIESLPTTWDEVIAACETMKANGVQNPVFWGWNITGNWFMQALMWSQDKAIVENGH
VTLDSPEALAALEQMQAIFTKCDMQNLDWKAALASFSAGEIGMMFWSTSALGAVERSQGDFDLVTGPFPG
MDETPRGLPAGGNAAMLTSTSEDPRVQEAAWAWLKFITSGEGAAEVAKTTGYMPPNKAANEIILADFYQQ
NPNKQTAVDQLPLLRDWLAYPGDNGLAITQVIYDGIERIVTGEAADMKALQEELVEEVADLLPNG
>gi|56696697|ref|YP_167058.1| sugar ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MRPAVFNYTMAFTQAPLLRYLLNGVIVTVSIFVIQVAVALPAAYALAKLRFWGREAVFGLVLFCLLIPVH
AIALPLYILLAKLGLTNTYAALVVPWTISVFGIFLMRQFFMTVPDDLIDAARMDGMSEFAIVWRVMLPTA
IPALLAFAIFSVVAHWNDYFWPRIVVTGNRDLFTPPLGLREFKGDGDGSFFGPMMATATVIVAPLIVAFL
LAQRRFIEGITLSGMK
>gi|56696698|ref|YP_167059.1| sugar ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MRRPDDTGARARTAWGLTAPALILMVLILLVPVTVAAILSFTDYALGNDSFAWVGWDNYQRLFTRSSYEK
MFLATFTYVITVVPLSVGLGLGAALLIQSLGRIGDLYKTIYFLPVMATLLAMAIAWEFMLHPTIGMVNRT
LALACGGWAEALPFFARGCAEGFPLWLGERETALWVVCFIGIWQGFGFNMVLYLAGLTGVHRELYHAAEM
DGAKSAWERFRLVTWPALGPTTVFVVTISCIRAFQVFDTIEAFWPQGGGPGKSAYVMMFAIFEKGVQQNL
IGIGSAITVLFLVFVMFLTLIQRWLVERKVHYG
>gi|56696699|ref|YP_167060.1| sugar ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MAGLQIDRIEKSFGDTRVLRGISLDIADGEFVSLVGPSGCGKSTLLRIIAGLEHQSAGHIRIGGRDVSGI
RAAERNLSMVFQSYALYPHLSVGDNIAVPLRMRRLNAMQRLPLLGRYWPGARAANVDINQAVSRAARTLE
IDALLARKPGQLSGGQRQRVALGRALVREPAAFLLDEPLSNLDAKLRVQTRSEIAQLHRRLGATFVYVTH
DQVEAMTMSSRIAVMMRGEILQCAAPETIYDDPDDIRVAEFIGSPRINVLPAEHRSGALSVLEHPLPLRV
PPTTDQFLRIGLRPEALRLCDPATAPLSGRVAHVENLGAELFAQIAIDAEAERVVVKAAPADRPRLALGT
RLGLDFDPGAAMVFDAAGKRLRRVTAARPRAGVVA
>gi|56696700|ref|YP_167061.1| LysR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MRPNHHQFVAFAYVVREGSFSAAAARLGVTQSTVTQHVANLEQGVGAQLLLRGRDGVEVTPTGRELYDLA
DRLVAVDRALAERLEGFASMRAGRLKVIANAPQPALRIIAAFTARFPEIRIEFGLHDWTTATGMIRSRMA
DVGLITEAPEHDDWERLCLESTRYVLYCRADSPLAGAGPLRLADLGGQTMILPEPGSLTERLVSARLRAE
GLRFARQVTMTTFPVMCEAVLQGVGVAIFLQNSSLIRDGLAQVELVDFAGPQQTWLVATRDRARLRLIAE
FTACALAAGA
>gi|56696701|ref|YP_167062.1| glutamine synthetase family protein [Ruegeria pomeroyi DSS-3]
MTPLIFAATCDLAGKVRGKGFPAEQRDKRLVRGVGWTPTNALITCFDTIGNSRYGALGDLLLIPDEDAEV
ELSFGEVTEHFMLGDIVELDGSPWDLCTRALLRGALDRLEALSGTRLLAAFEHEFQICGGPGPVGEAYGR
GGFEAQRALCETLMARLAQVGLSPDSIMKEYGPNQYEVVIGPEIGLRAADAAVILREITRSSARHLGQEA
TFTPIRDPASVGNGVHIHMSFLRADDSPATYDADGTCGMSALTASFAAGVLKYLDSILALTAPSVVSYLR
LTPHRWSAAYNNLGFRDREAALRICPVTTRDPASVARQYNIEYRAADAAACPHLALAAIVHAGCQGIEEG
LSAPEPTEEDLSLLPPEALAARGLVRLPQTLEEALERLGANATVAGWFPEPLVPVYLAHKQAEIAHVAEL
DTSGRCAAYEASY
>gi|56696702|ref|YP_167063.1| RpiR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MTIRHAIEAHADSLTQSERKLAAALLSDYPYAGLISIQELAERAEVSAPSITRFVAKIGLSGYQEMQRRL
ISELKEGDRSPVELHDGGTRIEGGYLDEFVARAAAQLQSARDAITEGQFSRICALLGDPKRAVYALGGRI
SDTIAQHLSFHLRQARQGVFHLPRDPETWPEYLLRMRPGDVFFMVDFRRYQTNLARLAEQAARDRKAHVV
LMTDKWLSPATRHASEVLAVPIETGTIWDSYSAALAVTEALATRVGEDNWDQTRARIEAWDAARGHARES
>gi|56696703|ref|YP_167064.1| N-formylglutamate amidohydrolase [Ruegeria pomeroyi DSS-3]
MRINFHSMAIFLTLKKYFLYSGGMQAAAAPLLLTDADPAPVDLVQGDSTVPLLLVCEHAGRAVPHALGDL
GLAPGVLDSHRGWDIGAEAVARAVAAELGAPLILQRYSRLVIDANRPPYSVEAMPEVSDGAAVPGNRGLS
ATARTSRIAEIFDPMDRQIARLLDNPPRRAAFSIHSYTPNLSGQVRPWHAGFLSRRSHATAETLRDHIAD
RRPDLVLAINEPYRIEDATDWFIPVHAEARGLPHCLIEIRNDQIDSAPGAALWAGLLAGAIAHVMESLT
>gi|56696704|ref|YP_167065.1| isochorismatase family protein [Ruegeria pomeroyi DSS-3]
MTLTRDLPLIPAQSALLFIDVQNFSAHRKGAEFDGLDPAEFDAKYGWYFDQLDSRVIPNMQAVQAACRAA
GVEVMYTTIESLTLDGRDRSLDYKITGFNVPKGSWDGKVIDQIAPEGDEIVLPKGSSSVFVSTHIDYVLR
NLGVRQLVISGLITDQCVESAIRDACDLGYLVTQVSDACLTYSQARHDNSLSAIKGYCRQVTTQELVAEL
ARA
>gi|56696705|ref|YP_167066.1| branched-chain amino acid ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MLELKGLSKSFGGVQAVRDVSMRLAAGQVHGLIGPNGAGKSTLVNLISGLLSHSAGTLTLDGRSLDGMSA
ARRAECGIARTFQNLRVFPALTVEQNIDVARYTAARAGRGADALVAEAMVQFDLDSRRNSRADALAYGQL
RRLEIVRALALAPRVLMLDEPAAGMNEQETQALGRALNWVRGQTDCALLVIDHDLKFIMSLCERITVLNM
GAVIAEGTPREVSENRQVIDAYLGEGNDHAA
>gi|56696706|ref|YP_167067.1| branched-chain amino acid ABC transporter, periplasmic branched-chain amino acid binding protein [Ruegeria pomeroyi DSS-3]
MRKTSIAALACVALASPALAADTIKIGLGVPMTGDYAPYSEWQGARCMADMINAKGGVNGMKIEVLIQDS
GADTQTAISLAQKFLDEGAVMLGTIPFSDTMIPVAQVAQGYGVSIFQPQSTQVEMHAGIVDNFFTGVSPD
PFTATAAANHALSLGVKNVVLMTSDEGGSWSARTPLWFGDVVEAGGGKVLSKLNFSFGTSDWSPQIAEMK
ALGEQIDAVYISSIMPDIAVLIRQMRSAGIEAYVVGSDGFDDPSLDAIGTDDPAILDKVFFATLAPSHAD
SAVVRFIAECKEMGIDVPGLFPATGADTVKAVAWAVEQSGSTDPATLAETLRNADSIPVMSVDAISFKET
RTYAQRTIPVIGFEGGKRVLISNEIPANTPTDWN
>gi|56696707|ref|YP_167068.1| branched-chain amino acid ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MLNVTDLRVYHGPIEAVHGITFQVKPGQCVSLLGPNGAGKTSTLSAITGIARATGTIAFDGTDMGGLPVE
ARMRRGLAISPEGRRVFANLTVSENLRLGAAMRPEGQAERIARWFDTFPILGERRDQQAGTLSGGEQQML
AIARALMSEPRILLLDEPSLGLAPRIVAQIFAMIETLRQQGMTILLVEQNATQALRLSDYAYLLNNGRIV
AEGTAGTLGQSDALMAELTGIG
>gi|56696708|ref|YP_167069.1| branched-chain amino acid ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MDYVAQQAMNALSFGAEYALLALGLAIVFSIMGLVNFAHGEIIAVGGYTMVAMAALALSNPLIVIGAAVL
AAVAGSMLLERVAFRPVRYADPTTGLLTAFGVSIVLQNLFLLLVSPRPIAVTSLYFLDWPVDLGAIRVSS
LQLFEALTTAVVIVALMLFLRRTVLGLAMRAASLDFEMVRLSGIRANRVFAMAFAISGLLAGIACVFIMA
RRGSVDPHLGFDPVLKAFVACVVGGFGSLPGAVLGGFLLGAVEVAMLVMLPQSLGGMTDAFVFGIIAMVL
IWRPDGILSPPVEKGDKI
>gi|56696709|ref|YP_167070.1| branched-chain amino acid ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MTLSRAQRRGIVGAALLALILIAIGLAATWFGSRYQLRLVYGAYVNLLVVLALQVFMGNARVTNLSHSAF
MGIGAYAAAICVTPEKIKAISLPDAPWGLNAFALDPVSSALIALVLTGLVAWLVGVFIVRLTGIGATIVS
LAVLVIVHGLFLYRTDIFKGNQAFFGIPQLFNLTWVVGLAVLVVFITRGFRESRWGVALRASADDEVGAA
AMGVDIHRLRLMAWVLSGVLLAVAGIAYAYYLGTISARPFYFNHVFLTLAMLILGGMRTVTGAVLGTFLI
SFGLEWVRWLETGPVVLGIDLPEALGLSGIVLGGVIVLTMALRPGGLMGDREIEDLILK
>gi|56696710|ref|YP_167071.1| acetamidase/formamidase family protein [Ruegeria pomeroyi DSS-3]
MGCNHTIHKHSHHFGWDNSIEPVLRVTSGQTIEIETIDSSGGQLGPGSTLADLGALSFDKVNPVTGPIHI
DGAEPGDAVAITFLDFKPSGWGWTANIPGFGLLSDQFPDPALHIWSYDKVAMRPALYGPGGQVPLKPFVG
TIGLALAEAGNHSVVPPRRVGGNLDIRDNAVGTTLYLPVEVAGGLLSLGDTHAAQGDGEICGTAIESPMD
VAIKIDLLKGADLAFPRFETEGPVSRHFDVAGYRATTGIGPDLMQAARDAVSGMIDWISATTGMSALDAY
MLCSVCGDLRISEIVDMPNWTVSFYFPKTALG
>gi|56696711|ref|YP_167072.1| sugar ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MTALTLSNVCKSFGPVDVLKNIDLTVDDSEFVVFVGPSGCGKSTLLRVIAGLEEATSGSIDIGGQVVNAV
PPAKRGIAMVFQSYALYPHLTVYGNMALGLKQAGHPKDEIERRIAEAARMLSLEAYLARRPSELSGGQRQ
RVAIGRAIVRKPKLFLFDEPLSNLDAALRMNTRIEIANLHRQLTASMIYVTHDQTEAMTLADKIVVLRDG
RVEQVGSPLELYNNPANRFVAEFIGSPAMNFVAADRVGGPVGATLGIRPEHARIGDTGPLSGQVIHIEKL
GGDTNVMLDLGQDSRFTVRVFGQYEIDPGAEVKIDYDPARTLLFSAEGKRLAG
>gi|56696712|ref|YP_167073.1| Gfo/Idh/MocA family oxidoreductase [Ruegeria pomeroyi DSS-3]
MTRVLIAGLGNMGLSHALAHHHHPQARIVGLVNRSGMTDHPDLQAYPVFADFHAALAETRPDLAVIATYS
DSHADFACAAMEAGAHVFVEKPLATTVADARRVVDCATRTGRKLVVGYILRHHPSWQRLIAEARALGGPY
VFRLNLNQQSDGPTWETHKALMQTTSPIVDCGVHYVDVMCQITDAAPVRVNGIGLRLSDEIAPDMYNYGQ
FQVVFADGSVGWYEAGWGPMMSETAFFVKDIISPNGAVSITDGNKGASDDVDGHTRVGGLLVHRPGNDTL
IELVGEPGHQELCDTEQAYMLRAIAEDIDLTRHMSDAVQSLRICLAADHSIRTGAPVDLRED
>gi|56696713|ref|YP_167074.1| sugar ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MNKARRNPANTLAMHGALIVYTCIALFPVFVILINSFKTRKAIFREPLALPDADSFSMIGYQTVMKQGDF
FLYFQNSMIVTVASLFFVLLFGAMAAFALSEYRFRGNTLMGLYLALGIMIPIRIGTVAILELMVASGLVN
TLWALILVYTAQGLPLAVFILSEFMRQVSDDLKNAGRIDGLSEYTIFFRLVLPLVRPAMATVAVFNMIPI
WNDLWFPLILAPAEETKTLTLGSQVFIGQFVTDWNAVLSALSMAILPVMVLYVIFSRQLIRGITSGAVK
>gi|56696714|ref|YP_167075.1| sugar ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MGAGRIKWHVVVFLAPAVLVYTAIMIFPLFNTLRLALYSEADQVRVFVGLDNFRRLFGDPNWSGAFWNAL
GNNFWFFFVHMLVQNPIGIALAAILSHPRLRFAAFYRSAIFIPTILSFVIVGFAWKLILSPIWGIAPDLL
DAVGLKALFAPWLGKEEYALTTLALISVWQFVGIPMMLIYAALLSIPEEILEAAEVEGLTGMAAFWKIKL
PLILPSIGIISILTFVGNFNAFDLIYAAQGALAGPNFATDILGTFMYRTFFGFQLQLGDPHMGSAIATAM
FAIILLGVCVYLFAIQTRIRRYQF
>gi|56696715|ref|YP_167076.1| sugar ABC transporter, periplasmic sugar-binding protein [Ruegeria pomeroyi DSS-3]
MKTKALSAILLATTTLGGAAWAETTLTIESWRNDDLTLWQDQIIPAFEASNPGIKVKFTPSAPAEYNAVL
NAKLDAGSAGDLITCRPFDTSLGLYQNGHLADLSDLDGMANFSDVAKSAWQTDDGAATFCVPMASVIHGF
IYNKDAFAELGLSVPETEAEFFDVLEKIKEDGSYIPMAMGTNDQWEAATMGYNNIGPNYWKGEEGRLALL
SGAQKLTDEAWVAPYRALARWGSYLGDGYEAQTYPDSQNLFTLGRAAIYPAGSWEITGFNAQADFEMGAF
KPPVQNAGDKCYISDHTDIAIGLNAASPNAEAARTFLNWVGSEEFANIYANALPGFFSLSSFDVPMQDPL
AQEFVSWRGECGSTIRSTYQILSRGTPNLENETWNASVQVIKGAESPEDAGKRLQDGLASWYDPQK
>gi|56696716|ref|YP_167077.1| N-acetylmuramic acid-6-phosphate etherase [Ruegeria pomeroyi DSS-3]
MLPQTERVRDEARGLDARPGPEILALLLHGQQAALDALNACLPQIEAAAEIVAHGLRSGGSLHYAAAGSS
GLMALADGVELPGTFGIAPERIHIHMAGGVPTNTAMPGHTEDDAQEGEQAALKVNAGDVVIALSASGTTP
YPTSFTRTAHARGARIVAIANNAEVPLFGLADCAIHLPTPPEVIAGSTRLGAATAQKAALNMISTLMAIR
LGHVHDGMMVNLIADNEKLRQRAQAIVTRIVPGASARRALDMAHGRVKEAALIAAGAGSLARATELLNQT
GGHLRPALADLQKDTDQGRENT
>gi|56696717|ref|YP_167078.1| BadF/BadG/BcrA/BcrD ATPase family protein [Ruegeria pomeroyi DSS-3]
MRESRVPYLIAVDGGGTSCRFALQAGTTRHELRLGSANVFSNRAGALRTLTEGLTRLVAQAGLPPDALAD
IPVFAGLAGVIDEVAAKEVAAALPLRRVEVADDRLPAVVGALGARTGCLIGVGTGSFLGRQDAQGIRLIG
GHGWSLGDEASGCWLGMALLRRCLWAQDGLEPETPLVATVGGRIGVGSSAIVRFSAQASPSDYAALAPLV
FQAADAGDPLGRALMQAGADYLARGLRALGWQPGEAICALGGVAGRYASFLPAEMTDALAKPEGSALEGG
LVLARRLAERNARGVV
>gi|56696718|ref|YP_167079.1| GntR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MSSDAIETIETYLRPGAWVEDAAGPLYVRLRKRIEQGIDSGLLAKSAPLPAEREIASLTGLSRVTVRRAM
QELVDRGIIVQRQGSGSFVADAAPRVEQSLSHLTSFTEDMERRGLNVTSEWLTRGVFIPSPEEVMALALS
SGEQVARVARLRRAEGRPMAIERASLPTDILPDPELVSSSLYAVLERDGNRPVRALQRISAVNLGAEDAA
LLGVEPGTAGLRIIRTSYLPNRRVIEYTRSLYRADAYDFVAELRLGNS
>gi|56696719|ref|YP_167080.1| SIS domain-containing protein [Ruegeria pomeroyi DSS-3]
MTQHITRMRREIDEIPEAVQRLLDHGAQDVARVAAVLRLRDPSFVATVARGSSDHVCTYLSYAAELLLGL
PVASLGPSVASVYDARLRLDRALCLAVSQSGKSPDIVAMTRNAGRDGALCVALTNDAASPLAGVSAHTID
IHAGPELSVAATKTFVTSAVAGLMLLADWAEDDGLRAALGNLPETLAAASRIDWPEMRVAIGARPSLFTL
GRGTSLAVSNEAALKFKETCQLHAESYSSAEVLHGPVSIVEEGFPVLGFAAGDAAEAPLAEIADQIAAKG
ATVFATTGRVTRARVLEHVRSGHALTDPLSLIVSFYSMVEAFASERGIDPDAPRHLNKVTETV
>gi|56696720|ref|YP_167081.1| N-acetylglucosamine-6-phosphate deacetylase [Ruegeria pomeroyi DSS-3]
MTLALSGARILTPEGAVEGHALLIEAGRIQGIAPLGEIPAKARHLRLQGGWLAPGFVDLQVNGGGGVMLN
NAPRLDSLRKMSEAHARIGATTILPTLITDAPEVVAAAISAVEAAISSGVPGIAGLHLEGPHLAPSRKGA
HDPALIRPMDDEDLATLLEAARRLPLLKVTLATESATPEQIRALSGAGVLVSLGHTDASFADCRAAAEAG
AACVTHLFNAQSQMGNREPGVVGAALALGTLSAGIIADGIHVHPVSLRNAIRAKTGPGRVFLVSDSMATA
GSDIAAFTLNGREIRRSGDRLTLADGTLAGAHLELAQALCNVVEMAGLDVGEAVSMATRYPADLIGRSDL
GRIAIGARADLVHLDEDLCLRRVWRDGLDLE
>gi|56696721|ref|YP_167082.1| oxidoreductase, molybdopterin-binding [Ruegeria pomeroyi DSS-3]
MSAPSAQPHIQHRSCNICEAMCGLIITHDGQDVLSIRPDPDDPLSRGHICPKAVALQDFRTDPDRVTRPL
LKRGTDFEEISWEAAFDHAAERIRAVQAAHDRDAVGVYLGNPNAHKFANLLNLPALVKAIGTSNRYSSAT
ADQIPHHVASIHMLGHPMLMPIPDIDRTDFLLIIGGNPVVSNGSMMTAPGYGRRIDAIKARGGRVVVIDP
RRTETAERAGEHHFIRPESDAWLLMAMLYVILSDGPARLRHLEPLIDGLDRLNAAVAPFTPERAAQATGI
GAHSIRQLARDFAAAPRAACYARMGASTQSFGTLCQWATNALNIVTGNFDREGGAMFTTPAVDYVGMTSR
RGKARSYPERRSRVSNQPLYNGEFPVSVLAEEIETPGPGQIRALVTVAGNPVLTAPNGRRIERALQGLDF
MMSLDIHVNDTTRHADLILPGTVALEETVYDMVFHTFAVRNTVGYAPPIFAPPQDNPPEWEVIARLTAKL
TGANQIGPTPDQVLAVLLAQGFHGESVSLAGLQQTGRPLDLGALVPNLAERLETPDGRLDLAPQAFLDDL
PRLLASGDRHDPARPFTLIGRRQARSHNSWTQNSPRLVKGRNRCTLEVNPADAARLGLGEGDPARVTSAA
GTVTLPVEITDAMAPGVLSMPQGWGQKQGRLTAATRTETVSINDLTDDSRTDPLSGNAAFNGLPVSLHPA
>gi|56696722|ref|YP_167083.1| branched-chain amino acid ABC transporter, periplasmic substrate-binding protein [Ruegeria pomeroyi DSS-3]
MKNMIKGLLAATALTAAAGLASAETQGVTDDEVVIGAVNDLSGIFAAVGVPATKGANVYFDKVNAAGGVH
GRKIRYVVEDHGYQMPRAMQGFNKLLNRDKVFAMMQNLGTPMNLAGFKLIDPLGIPNIAPLSAARQMIQD
PMQNKFTSFSSYFDQSVVGVKYLVAEYGAKNVCSMYLPTDFGKEILEGTKAGAEEAGAAFVAETTHKPDE
TDFVGSLSKLKESGCEIVTIALGVRQAITIVGTAKKMGLTDMQFMGTSASFLTVVAQVPGGVTEGFYAAA
SWQDLWARADEPAPKAFIEEYKAATGEDPQGFAMLGYAAAQQMVMALEAAGRDLTHESFIAAMESLDYQD
DLVGNHINYGPDDHQGADSVYVLKVENGGWAKVHEE
>gi|56696723|ref|YP_167084.1| AMP-binding enzyme [Ruegeria pomeroyi DSS-3]
MDTRTLPAQTVINGVTFNATPGQRPVLVDGTTTISALFQKRCAELGTRTAHREKDLGIWKAYSWADYWQH
AKWIGLALRKLGLKRGEVVSILSEDRKEWAWFDMGIQAVGGIASGVYTTDSANQLKYLINDSDSRFLIAE
NEEQLDKYLQIEGEVPGLLNVIILEDEGLHDLNHPRCMMIDRLYEIGREAEKEEPGAFEAEIAQIRPEDV
ALLIYTSGTTGMPKGAMLTHENIMAGIEAGAHRLPTEETDEQLCFLPLCHILERDVSIYFPLASKCTVNF
AESPETVFANLQEVSPATFTAVPRVWEKIYSQVLILAQEATPSGRAAFGMALRAGMKRAQYLVENKPVPA
GVAANFWLWDRLVLRNLRRMLGMDKMRRGGTGAAPISPELLKWYWAIGVPLVEGYGMTETAGIATINTPE
ENRIGTIGRVVPGIDVRIAEGGEIQVRGLNIFKGYWRNNEKTAESFTDDGWLRTGDIGRMDDDGYVTITG
RLKDIIITAGGKNITPAEIESRLKFSHYISDAVIVGDKRKFLTCLIMIDQENVEKFAQDRKVPFSNFASL
CAAKEVRELIAAEVAQVNKEFARVEQIKDFRLIDVLLTAEDDELTATMKLKRSFVEKKHAHLIEDMYK
>gi|56696724|ref|YP_167085.1| branched-chain amino acid ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MTEPILKIRNIESFYGPIMAIRGVSLEVRPGQIVSILGANGAGKTTLMKTISGVMDPEKGTITFDGEEIQ
GSEPHKVVQKGIVHVPEGREVFPLLTVDENLSLGAYTATDKAQIERDRDLVFTYFPILKERRNQEAGTLS
GGQQQMLAIGRGLMANPRIMLLDEPSLGLSPLLVQEIFAILKRLNEEQNMTMMLVEQNASAALALADHGY
VMEVGRIVMDGSAQSLMASEDIQNFYLGVQEEGARENRRWKRKKTWR
>gi|56696725|ref|YP_167086.1| branched-chain amino acid ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MSLLELENVTLKFGGLTAVDNLSFSVEEGEVFAIVGPNGAGKSTVFNLISRFYDPYAGQIRFDGHNLLEV
KPSGVAAYGVARTFQNIELFEHATVLQNLLVGRHRHRRTNLFSEIFFTPSARRQEMENREKVEEIIDFLD
LQAYRDKYIAGLPYGVRKVVEVARALATDPKLLLLDEPASGLSVEETNDMRWWIDDIRRQMGITVLMVEH
DMGLVSGVSDRVLAMADGAKLALGTPAQVQSDPAVIEAYLGKAA
>gi|56696726|ref|YP_167087.1| branched-chain amino acid ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MRIVFKTDYMQDIRPWKDGYQLGLYMILLAIVVAAPWLLDAFYLGELTNVLIWAIAGMGLMVLTGHTGQA
SLGHAAFLAFGCYANVILLEAGVPFIIAFPLAGVITGLIGATVAIPALRLHGIYLAIFTLALSILVDDII
VLSEPWTGGVSGKYVAGIDLFGLTIDRWGTPMLFYWLVLAVTVIVALGYINLLRSPLGRSFIAVRDSEVS
AQAMGVDIARAKTISFGLSCMVTGWAGAFMGLFAGAFNNETFSVVISIELLMMIVIGGLGSIHGAFFGAI
VIGFLPQFLSIAKEYVGAVFGGSTVAIPGLEFGIFGMILIAFILLEPMGIYGRWLKIRTFFELFPFYRKD
MFKRQKSYLKTERLR
>gi|56696727|ref|YP_167088.1| branched-chain amino acid ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MDNVQLLISGLANGCVYGLIALGFVLIYKATESVNFAQGDFMMLGAFVTIGLTNTEYMGLPFWLALPISI
GIMAGLGYLLDRLVIRRMFGESQTAVVILTIALGFVIRFAAGLIWGHEPQTLQNPLAGKELSFGGLVLGL
EDVAVIIVTLALTGSLYLFFSRTKLGLAMQGASQNQLAAYYMGIPVKRVQGFIWALAGAVAAVAGILFAA
KGSVDPSTGLLGIKAFAAAVIGGFGSLPGALAGGLIVGVIEPFASRYIAAGYSQIAPYALLVAVLVFRPH
GLFSQVRVKKV
>gi|56696728|ref|YP_167089.1| zinc-binding dehydrogenase family oxidoreductase [Ruegeria pomeroyi DSS-3]
MTDIPSTMFAVLQTGDGYSGKATGPAIADAADWLEPGEIAVPQPGPGEALIRLRMASVNPSDLHFIKGEY
GQPRVKGAPAGFEGCGDVVAAGAGAEGLVGQRVAFVAASSGAWAEYVLTKAQMCIPLRPDISDEDGSAQI
VNPLTAMAMVDIARSEGEAFVVSAATSQLGKLMVSLGRDLGLKPIALVRRAEAVEPLKALGAAEVLVTSD
PEMGQKFATISRALKPRVFLDAVSDQTSERIFTAMPNGARWVSYGKLDAELPVLTQMGQLIFMGKRIEGF
WLTQWMMTTPPADQGRVVAEVQARFADGRWKTDVSGHLPLRDVVSGLAEALKKTDGKVMITP
>gi|56696729|ref|YP_167090.1| TetR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MSDTITNSPSRSERYEELLDAAAECFQSRGFDATSIDTVARHLGATKGRVYHYFPSKMDLFNAVRDRGMD
LVFQATDPGYHADLPVLDRIEVMARGHVRAMLLHHSFMLVLKDGLLMRRYTTTTEFQKESLAQHIARRDA
YEARFRELLAMGLAEGSLRAGPDPAITVQTFMSALNGPVAWFRPRACDTPQKYEAIVEEIVRFAMQGLRA
HPS
>gi|56696730|ref|YP_167091.1| hypothetical protein SPO1854 [Ruegeria pomeroyi DSS-3]
MQTGTGPRYQPRQVSDLGIRSVGPVRFKIWGLCAAGRDVAEEDLACAQHFLSDAVLPAVAAQGDSDDLGF
VIVHPGSAGLSIAAQWWVQGSVLCQRLFRREYGAAQPVDTTARPVVACVWELSIINAEQEAWRHTMMVPQ
PDPEAYLAARGGLTAV
>gi|56696731|ref|YP_167092.1| hypothetical protein SPO1855 [Ruegeria pomeroyi DSS-3]
MNRILILIALGAIAAGAYVFFTQGEQQTEAPQSSAVTPAEPITEAPAQTTTEADQGAAQTALEQAQSAAE
QASEAAAEAVDQATSAVTETLNQVGEAASQAAQGATDTAAQVVDQATQAASETATQAAEVASNAVDATTE
AANDAATAVGDQVAAAQTGAAELYKNWQDNGLLTQSGFDYDKMVAGVEASALNETLKTGVLKVLSGIKAA
PETISVQAQALRALMAN
>gi|56696732|ref|YP_167093.1| ribonuclease BN, putative [Ruegeria pomeroyi DSS-3]
MTRSANPSLFLPLRAAWLALMRFQAKSGFVMSSHVAMSMMMALFPFILFTVALAGSLSQDLVTDDLIQLI
FGTWPEQVATPIVAELKAVLAGANSRVMTVGGVLAVYFASNGVDAVREAMSRAYHDAETRPFWKTRLLCI
AIVVGGGAIVLAVAAFEVVMPIYTRLVTDALPGAAPDWLSVERLSWIFVVAMPAGAVLACHALLPAGRHP
LRRILPGVVLTLVLWAGCGWGFSLYIANFASYSTTYAGLAGAMAALIFLYLNAAILILGAEFNGALMDLS
GGPD
>gi|56696733|ref|YP_167094.1| hypothetical protein SPO1857 [Ruegeria pomeroyi DSS-3]
MTVLSNGGRHARLFALVYQQARAEAVDARLHVQPLNAGDALSLLSRARASFRPQRLDAGDARLARAGKQM
FSGPFSETENGARLAAKAGGHHKLFGTVRP
>gi|56696734|ref|YP_167095.1| ribosomal RNA large subunit methyltransferase J [Ruegeria pomeroyi DSS-3]
MAKNTSGRGQRDLKVKVKTARGRKLSSTRWLQRQLNDPYVKRAQAEGYRGRAAFKILELDEKYRFLVPGA
RVVDLGCAPGGWCQVAVKRVNALGERSDKRVGRVLGIDLQEVEPIAGAEIHQLDFLDDGADDRIKEWLGG
KADVVMSDMAASSSGHKQTDHMRIIALCEAAAYLAFDVLEEGGTFVAKVLAGGAEGDLQKLLKQKFTKVA
NVKPPASRSDSSEKFVVATGFRG
>gi|56696735|ref|YP_167096.1| Ppx/GppA family phosphatase [Ruegeria pomeroyi DSS-3]
MAPKRPKGAGAFPKAVESPAPNRPDPDALYAALDLGTNSCRMLIAQPKGSGFHVVDSFSKSVQLGAGLER
TGRLSRSSMARTIQALRICQQKIKRNKVHRMRLVATEACRRAKNAREFIRDVRRETGLTLEIIQPEEEAR
LAVISCAPLVSTRSEQLLVVDIGGGSTELVWIDLTSVPRRDRPSAIMRLHAGFHPPESPFPAAKVVDWIS
VPLGVATLRDQFNDVEDDSARFALMSWFFEEQLADFAPYSSPLGRDRFQIVGTSGTVTTVAASHLGLKRY
DRTKVDGLRMTSEQIDKVIRGYLDLGPQGRRRDPRIGEDRHALIMSGSAILQALLRCWPTDRLSVADRGL
REGLLYAQMSADGVLEDGPF
>gi|56696736|ref|YP_167097.1| twin-arginine translocation pathway signal sequence domain-containing protein [Ruegeria pomeroyi DSS-3]
MKNDRTLTFDEFDEAVNPRPEDCDFDQVVEEALSRRGFLGGVLAMGGFAALGGAVLPRGAEAASNRFAFE
AVAASTADEIVVPKGFKADVLVRWADPLWSDGVAFDQVTRGTAASQARAFGDNTDGMEVFHHEGRTLLVV
NNEYTNREIIWGNRAEGKAETDDDVEKGLLAHGVTVVELAHDGAHWQVVTDSPYNRRITPRTEMALTGPA
AGHDLMKTAADPTGTVTFGTWNNCGSGTTPWGTYLACEENFNGYFSAADEAHEVSAELNRYGVSAKDWGY
GWARVDDRFDVAKNPNEPNRAGYVVEIDPRDPNSTPKKRTALGRFKHENAECVVNRDGRLVIYMGDDERG
EFLYRYVSNGVYAAGVDTDELMENGTLYAAKFDASGKGIWLALTPEATGMSQAEICIHTRIAASKLGATT
MDRPEWVTANPNADEVYCALTNNKNRGVKPNRGGDDTPAEGPNPREKNNYGQIVRWRPEGGDHSAEGFDW
DLFVLAGNPTVHSDANAGSENVNAGNMFNSPDGLAFDSNGLLWIQTDGKYSNEGDFAGQGNNQMLAGDPV
TGEIRRFLVGPREAEITGLCWSGDRRTMFVGVQHPGEEGDSHWPDGGDSVPRSAIIAVTREDGGVIG
>gi|56696737|ref|YP_167098.1| hypothetical protein SPO1861 [Ruegeria pomeroyi DSS-3]
MPEVTIVYWRDIPAQVIVGKGRRGAKRQLEERFEQAIDRAAMKVGAQDTDAYLAEWRKAEPYEVAGDPAD
IVEAEAQRLEREYDRDRIKALIANDGWA
>gi|56696738|ref|YP_167099.1| metfprotein,-like protein [Ruegeria pomeroyi DSS-3]
MALLNFKKRETVENGPVNPTVEAFLKDYSIEVMPRTAEKVEDFRALLPEGTRVYIAHIEGTPIEDMVATA
KRLAAEGYPVMPHFPARIIKDAKTLENWIAMYQGEAGVDQALLLAGGVAAPHGDFHCSMQLMETGLFDKA
GFKRLHVAGHPEGNKDIDPKGGDANVMDALRWKQKFSETTDAQMALATQFCFEAKPIIAWADGLKAAGID
LPIHIGIAGPAKLQTLIKFAIACGVGPSLKVLQKRAMDVSKLLLPYEPNDVVTELAAHKAANPDFNITNV
HFFPLGGIKTNATWAINNGGASTRPVNPT
>gi|56696739|ref|YP_167100.1| methyltetrahydrofolate:corrinoid/iron-sulfur protein methyltransferase [Ruegeria pomeroyi DSS-3]
MTRTIVESKTKTAIIGFDQPFCVIGERINPTGRKKLAAELEAGDFSTVEKDAIAQVAAGATVLDINAGVV
YNSNPNPNETEPPLMRKIVELVQGLVDVPLCIDSSVPGALEAGLAAAEGRPLLNSVTGEEERLEQILPLV
KKYNVPVVAISNDDTGISEDPDVRFAVAKKIVERAADFGIPAHDIVVDPLVMPIGAMATAGQQVFALVRR
LREELGVNTTCGASNISFGLPNRHGINNAFLPMAMGAGMTSAIMNPVALPVTQKAIAEKRAAVTAAGIIL
PEGMDDETFVQMFGLGSTLSRAGKEMEAIRAANLLTNNDAHGAEWIRFNKPPAAEGEESRGRGGRAGSRR
RRA
>gi|56696740|ref|YP_167101.1| hypothetical protein SPO1864 [Ruegeria pomeroyi DSS-3]
MAHTNKVIRSINLDGETICVDLFQRPDGTYGFDEFRRDPEDGRGWYSIGHHGAASFETFEHALAEAKANV
SWLQDALCE
>gi|56696741|ref|YP_167102.1| transketolase [Ruegeria pomeroyi DSS-3]
MDLTALRTANPDHWTKATAIRALTLDAIAAANSGHSGMPMGMADVATVLFEKHLKFDAANPTWPDRDRFI
LSAGHGSMLLYSLLYLTGNPEITLDEVKNFRQMGAKTAGHPENFLAKGIETTTGPLGQGISNAVGFAIAE
EIQRAQYGKKVVDHYTYVIAGDGCLMEGVSQEAIGLAGRLELSKLVVLWDNNNITIDGTVDIADRTDQVR
RFAASGWHVIEIDGHDPAAIDAALTQAKGSKKPTMIACKTHIALGHAAQDTSKGHGALTDQGQLLAAKEG
YGWAHGPFEVPSDVKSAWEAIGSRGAAERAAWEARFAELSERKQAEFTRAYAFEAPKKLAGAIRALKKQV
SEDQPKWATRKSSEEVLKVVNPIMTETVGGSADLTGSNNTKTADLGIFLPENRKGRYIHWGIREHGMAAA
MNGMALHGGIRPYGGTFMCFTDYARPAMRLAALMKIPSVFVMTHDSIGLGEDGPTHQPVEHLAISRATPN
TYVFRPADTVETAEAWELALTFQNSPSVLSLTRQNLPTLRTEHKVKNLTAQGGYVLAEATGKRQVILIAT
GSEVEIAMQARATLEAEGIGTRVVSMPCMELFAEQDEAYRKRVLPAGPVRVGIEAAMRAGGWDRWLLGER
GREAKAGFVGMTGFGASAPAEELYEKFGITAAATVAKVKDLLG
>gi|56696742|ref|YP_167103.1| hypothetical protein SPO1866 [Ruegeria pomeroyi DSS-3]
MSQIEELHSRISAAMERIGAGVEALAMPQEAAPPSEPTGADSDLAAALEDERLANAQLQERLKSIKAKHA
AEIEALKAESAEAPVTAAEDGELEQLKADLAEATAKLMAAEAARAELAEAKATLEAEDQSTLLRAEIDAL
KAELDAVEDVDALKAEIEELRAQASDSAIEDELRTEIAALKAELGQSERVSELSAELEMLRAERVSHGAA
MSQLDGDLQRLRKANDQLRKALADLRAANEAGVGEPHLINAAMLAELEALRAQRATDAAEVQAVLSKLGP
LLTSANLTEGEDE
>gi|56696743|ref|YP_167104.1| hypothetical protein SPO1867 [Ruegeria pomeroyi DSS-3]
MPEVTIHIGGRAFEVSCQEGEESFLQSAAKMLDDEAQVLSDQIGRMPEARMLLMAGLMLADKTAAVEDKI
GVVEARLAEREAELEALKAAPAPEPERVEVAVIPPSVTDTLAELAARAEALADRVEEKAAG
>gi|56696744|ref|YP_167105.1| glutaredoxin-related protein [Ruegeria pomeroyi DSS-3]
MTDAKTRIDETVKANDVVLYMKGTKEMPQCGFSSRVAGVLNYMGVAYADVNVLADDEIRQGIKDYSDWPT
IPQLYVKGEFVGGCDIITEMTLSGELDTLFEENGVAYDKDAADKIRAANA
>gi|56696745|ref|YP_167106.1| BolA family protein [Ruegeria pomeroyi DSS-3]
MAMEAHEIEALIRASFPKAKITITDLAGDGNHWAAEVVDESFRGQSRIQQQRAVNAAVKPEIDSGKLHAL
ALTTKAPA
>gi|56696746|ref|YP_167107.1| phosphoribosylformylglycinamidine synthase II [Ruegeria pomeroyi DSS-3]
MQEPAITPDLIAAHGLKPEEYDMILEIIGREPTFTELGIFSAMWNEHCSYKSSKKWLRTLPTSGPQVICG
PGENAGVVDIGDGQAVVFKMESHNHPSYIEPYQGAATGVGGILRDVFTMGARPIASMNALSFGEPSHPKT
RQLVNGVVEGIGGYGNCFGVPCVGGEVRFHPAYNGNCLVNAFAAGLADSDKIFYSAASGVGMPVVYLGAK
TGRDGVGGATMASAEFDDTIEEKRPTVQVGDPFTEKRLMEATLELMQTGAVISIQDMGAAGLTCSAVEMG
DKGGLGVRLDLENVPQREENMTAYEMMLSESQERMLMVLKPELEAEARAVFEKWDLDFAIVGETIAEDRF
LIMHHGEVKADLVLSKLSSTAPEYDRPWVPTPAAEPLAEVPQIDPIDGLRALLASPNYGGKQWVYEQYDT
MVMADSARTPGLGAGIVRVHGTDKALAFTSDVTPRYVRANPEEGGKQAVAEAYRNLTAVGARPLATTDNL
NFGNPEKPEIMGQFVGAIKGIGAACAALDMPIVSGNVSLYNETDGTAILPTPTIGAVGLLASTDEIIGKE
VREGHVALVVGETTGHLGQSALLAEVFNREDGDAPHVDLEAERRNGDFIRANRALIKACTDLGDGGLALA
AFELAEGAGVGLHLDDAPTEILFGEDQARYLVACNFDQAEALMSAAGQTGVTVTSVGRFTGDTVRIGGSE
ALLADLAATFRASFAAAVA
>gi|56696747|ref|YP_167108.1| mechanosensitive ion channel family protein [Ruegeria pomeroyi DSS-3]
MRQFMKPLLKVLALLAALISISAPLSAQVPLPSSGGGAAAAPTVPDDLTPDQVDGLVARLSDDQVRALLL
ERLDAVAQAAQVQPEPRKGPIARVGDAAKAMIASWLDAVRKVPLLVSKQAEALSNFSAKLGGSGIATLFG
YTLLALAIGFAAEKLAVYVTRSWIKADPGSAADNLRGAVSFLFRRFCREVLGLVVFYYVLVFVGRRLLEP
EQIAYAAPFVLYLIWLPRLGAAISRFILAPNRADLRLVNASDHWARFLHRNQIGLFLLIGFTLFIVTFNN
LNGVAMGEMRLGFWLNTSIHVYIALIAWTARSGLTEMMRGDDPDRTRFDDKIATYYPYFAIAVSAVVWLI
VEYFVAIQEIPVLRNIGAGAHYTTMFWLLMAPAIDTLIRGLVRHLQPPIIGTGAIAEQAYRATKRSYIRI
GRVLAGIFVILMIANAWQIDLRQVAGAGTDLGGAVIQFLMIAAVGYILNEMVSLWINRQLAREQTAANQS
PDEEAGEGGGAGGSRLATVLPLLRMTAQAAIAVIFALLALGALGLDITPLLAGAGILGLAIGFGAQKLVA
DIVGGVFFLIDDAFRVGEYVDVGGTTGTVEKISIRSMQLRHHRGPVHTIPYGEIAKLTNFSRDWVIMKLK
FTVPFDTDPNKVKKIFKKIGAEMMADPTHAEGFLQPFKSQGVFDFDDVGMIIRGKFMAKPGKQFTLRKEI
FNKVKAEFKANGIDFARREVRVAIPGLDEAEHMTPEQKSAVAAAAASQTANEQAPGS
>gi|56696748|ref|YP_167109.1| LysR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MIGRVKKVADMDWDKLRIFHAVADAGSLTHAGDRLNLSQSAVSRQIRALEESLNATLFHRHARGLILTEQ
GELLFDATKSMAKRLDAAAARIRDSEEEVFGELRVTTTFGFGTLWLAPRLAALYQKYPDLKVDLMLEERV
LDLPMREADVAIRMKEPSQADLIRKRLMTVEMKLYATRAYLDSAGTPQDISDISAHRLICQNISAAQVGA
SAVLVQHLLAYNPSSLLTVNNYFGVLQGVLHNLGIGVLPDYVTQDFPDLIHVLPDIKSALVPVYLAYPEE
LRHSQRVAAFRDFVQEEIIAHRKQLRELGIL
>gi|56696749|ref|YP_167110.1| indolepyruvate ferredoxin oxidoreductase [Ruegeria pomeroyi DSS-3]
MSQPKLTLNDKFDLEKSPVLLNGTQALVRLMLMQKARDAAAGLNTAGLVTGYRGSPLGAVDLQMSRAKKQ
LNASDVTFQFGLNEDLAATALWGSQQAGLRGDGKYDGVFGLWYGKGPGVDRSGDVMRHANMAGTATHGGV
LMAMGDDHTGESSTVLHQSEWALVDAYMPVVSPAGVQEILDYGIYGYALSRFSGLWVGLKTMKDTIEVTS
VVDGRPDRMQVVIPEFDMPEGGLNIRLGDTPHLQEGRIIDYKRFAAEAFSRANRMDKRVWGKPGAKIGIV
AAGKNWLDLVHAMSLLNIDENEAERLGITTYKVGQTFPLDMQSFHDWAEDLDLVVIVEEKRKLIEVQVKE
AIFDDRQGRRVYGWYKGGAGALHRDELFPTRGALDPILIAEKLGGILIEEGRETDGIRAGLNALADARRN
DNAQEIASRLPYFCSGCPHNSSTKVPDGSRAYAGIGCHYMVQWMDRNTQGFTHMGGEGANWIGEAPFSKT
KHVFQNLGDGTYNHSGVQAIRAALAAGTNITYKILFNDAVAMTGGQENEGDLSAPRIVAELKAMGVKELA
VVYDDKEDVDRSQFPSGIPFHERAELMQVQKRFREIAGVSAIVYIQTCAAEKRRRRKRGTFPDPDKRAFI
NTDICEGCGDCGVQSNCVSIVPKETELGRKRAIDQSSCNKDFSCVKGFCPSFVTVQGAKIRKEATAEIDL
PDLPMPDLPAITGTHNVVITGVGGTGVVTIGAVLAQAAQIDGKGAGMMEMAGLAQKGGAVHIHCRIANRP
EDISAIRVATGEAHALIGGDLVVSAGAKTLGLTRTGTTGAVVNSHEIITGDFTRNTEFTIPADRLSLALE
ARLKERLDLFDASELARAVMGDSIYSNMMVFGAAWQRGLLPVSHEAIMQAIELNGAAVERNKRAFDIGRW
AVLHPDEATRLIRPGVVELSKSPEDKIAYRAEHLTAYQGARLAKRYRKLVDGIEDGDLRMAVAEGYHKLL
SYKDEYEVARLLLDSRDKAAAEFDGDLKLTLHLAPPILGGKDADGRPKKREFSERWLGLFKLLARMKGLR
GTPLDLFGYTAERKMERALIRQYEKDLREVLPRLDTRTREAIVALARLPLDIRGFGPVKMANEAKAAKRR
EELLAVIRQGGPALAKAAE
>gi|56696750|ref|YP_167111.1| acyltransferase domain-containing protein [Ruegeria pomeroyi DSS-3]
MTAQRHIARDISYAHSAATKGGRVVIRLMENTTGRLNLIRRAQGYEQEVARGRDFWAVMVERYGLTLDVV
GGALSNIPQDGPLILIANHPYGILDGLMMGHILAQTRGDFRIMAHRVFRKAEDINRIILPISFDETREAV
QLNLDTRRQALSYLGQGGAIGIFPGGTVSTALHPFSHPMDPGWRGFTARMVAKSNAVVVPVFFDGHTSRL
FQIASHLHSTLRMGLLLKEFRKRMDTPVRVVVGQPIGRDILDPLARDTRKMMDFLRKATYELSPTPLKSY
DYGYEFEERHRA
>gi|56696751|ref|YP_167112.1| glutamate racemase [Ruegeria pomeroyi DSS-3]
MAVGIFDSGLGGLTVLEAAQKRLPEVEFLYYADSAHAPYGVRTPDDIFQLTRAAVHDLWNRGCDLVILAC
NTASAAALRRMQEEGVPPGKRVLGVFVPLIEALTERQWGDNSPPREVEVKNVALFATPATVASRAFQREL
AFRAIGVDVEAQACGGVVDAIEEGDLILAEALVRSHVDALKRKMPYPQAAILGCTHYPLMEPIFQDALGP
DVRVFSQGNLVADSLADYLERHPNMRGSGAAGYLTTGKPATVSNRATQFLRRQITFAAA
>gi|56696752|ref|YP_167113.1| N-acetyl-gamma-glutamyl-phosphate reductase [Ruegeria pomeroyi DSS-3]
MTHKIAILGASGYTGAELVRLIAEHPNMEIVALSGERKAGQSMAEVFPHLRHLDLPVLCKIDEIDFAGVD
LCFCALPHKTSQEVIRALPATLKIVDLSADFRLRDPEAYRTWYGNEHVALEQQAEAVYGLTEFYRDQIRT
ARLVAGTGCNAATGQYVLRPLIAAGVIDLDEIILDLKCAVSGAGRSLKENLLHAELSEGANAYAVGGTHR
HLGEFDQEFSALAGRPVQVQFTPHLIPANRGILATTYVRGDAQTVFQTLAAAYADEPFVHVLPFGETPST
HHVRGSNHCHIGVTGDRIAGRAIVIAALDNLTKGSSGQALQNANLMLGETETTGLTMAPLFP
>gi|56696753|ref|YP_167114.1| cytochrome c-type biogenesis protein CcmE [Ruegeria pomeroyi DSS-3]
MKSLKKQRRIQVIILATVALVLATGLIGYAMRDGINFFRAPSDIIAEPPQPSETFRIGGLVEDGTLVRGQ
GETVRFSVTDGGASVPVVFTGVLPDLFAENQGMIGTGRYVNGVFEASEILAKHDETYMPKEVMDALKEQG
VYQAPES
>gi|56696754|ref|YP_167115.1| hypothetical protein SPO1878 [Ruegeria pomeroyi DSS-3]
MQTVRQIAQEIVAREGGFVNDPDDPGGATNFGVTIHTMRRLGMDITGDGAVDVADVRALSREQAVEIFLT
HYYARPRIGEMPEAVQASLFDMYVNAGGNAVKILQRLLRDMGYEVSVDGAIGPQTLRAAQDAATPRPEAL
RDAYGVARRNYYFRLADRRPASRKYARTRAGGKGGWIKRAEEFMAPEYRLSDAEFQRRVSGWD
>gi|56696756|ref|YP_167116.1| hypothetical protein SPO1879 [Ruegeria pomeroyi DSS-3]
MTEFRNHDPRYRPRPTHRQSLSPGSAAHSVAPSGPFQAAPVLQRGVFLGGRRCQRQARIGSGIGNAGAVM
AQGAQGADVLDRLWHAGHGGGQIALEILSLGLVAGAEIEGHDDAQQPPQRFGHQRQALHPFPKPDRIGHR
RDKEAQRPQRQCRARQPVQPVHEPVEPATPALREFRRELVQRAHLYLGRARRPGLGILAEHLDRFAHRVA
ATAKQHSQQIADQSHPETLR
>gi|56696755|ref|YP_167117.1| cytochrome c-type biogenesis protein CcmF [Ruegeria pomeroyi DSS-3]
MITELGHFALILAFMVAIVQMVVPLIGAHKRWPGWMALAEPAAGAQFLLTAFAFAALVWAFVTSDFSLRL
VVLNSHSAKPMLYKISGTWGNHEGSMLLWVLIVTLFGAMAAWFGGGLPPTLKARVLAVQSAIAVAFFAFI
LFTSNPFLRLAVPPFDGQDLNPLLQDPGLAFHPPFLYLGYVGLSMAFSFAVAALIEGRVDAAWGRWVRPW
TLAAWIFLTIGIALGSWWAYYELGWGGFWFWDPVENASFMPWLLAAALLHSAIVVEKREALKSWTILLAI
LAFGFSLIGTFIVRSGLLTSVHAFANDPERGVFILIILGLFTGGALTLFAARAQAMEAKGVFSMVSRESA
LVLNNILLAVSAFVVFFGTLWPILAEMFFDRKLSVGAPFFNAAFTPFMVALGVVLPLGAMLPWKRGKLGR
VAHSLRYAFVLALALAILVWVMQTGRSALGPVGLFLGAWITFGAIVDLWSRTGRSGSVARLFRLPRADWG
KAVAHSGLGVTMFAIAGLMAWEVEDIRVARLGEPFEVGGFTLTLDGVERVQGPNYISTMGSVRLEQAGRA
IDTLHPEKRDYPVARMPTTEAAIDYRILRDVYVVIGDQQDDGGWTIRTYIKPFANWIWGGCILMALGGAL
SLSDRRFRVAAGARKAPAGGVPAE
>gi|56696757|ref|YP_167118.1| cytochrome c biogenesis family protein [Ruegeria pomeroyi DSS-3]
MKRLILILSLIASPLWAVQPDEVLDDPALESRARSLSEGLRCLVCRNESIDESNAELARDLRLLLRERLV
AGDSDEQAVAYIVDRYGEYVLLKPTATGANWLLWLAGPLMLLAAAGMGWGFVRGRATAAPATETALNPEE
QERLRRILEE
>gi|56696758|ref|YP_167119.1| enoyl-CoA hydratase/isomerase family protein [Ruegeria pomeroyi DSS-3]
MQYDTISLDIADGLAVLTLNRPDKMNALTSRMRAEITHAMKAAAREARAIVLTGAGRAFCTGQDLGDAGS
SGKIDLERTLRDEYNPMLEAIYDCPVPTIAAVNGPAAGAGANLALCADVVIATESAYFLQAFARIGLMPD
AGGTWFLPRQMGLAKAMGAALFADKIDARQAEAWGMIWEAVPDAEFDAQWRKRAAYLANGPTAAFANIKK
AIRGSYGTALPDQLAAEAHLQGECGRSRDFQEGVVAFMEKRAAKFEGR
>gi|56696759|ref|YP_167120.1| hypothetical protein SPO1883 [Ruegeria pomeroyi DSS-3]
MSVPSHSPDAAVLEHLTGRSRGLYSWITSDQVALLLDRDGLLRVQAPGDLDVEGELIARVRRQEGVFHLI
TAPGARVWVNRQPVEAADLTHGDVIEFGEQGPLSRLRIYDERRRPHPTLVEMLSDALSYLRTSRRPLLAR
LPRAAGLFLGRFLGNGALMFRGLVLLGLVALAALAIWQIRADRALRAQYESGRFQVEALASALAEARREA
IRPGDLDALQDEIGIRLQLNAERLDTLEERSSAATRVISTAAGSVAFIQGGYGLRHRDSGQMLRHVLGAG
GNRLMLPNGQPMLSLEGDGPVAEVQYTGTGFVLAETGLIATNRHVAVPWEKSAAMGFGGDTMEPVFTRFI
AYFPGRADPIDLVVRGLSDSADLALVAPAAPVELPPGLPLAEAAPPPGLEVLVMGYPTGLMSMLARSGTG
FVEELRGAGITGFWEVAARLAGEGLIWPLASRGIVGQVTPALVTYDAETTHGGSGGPVLTLRGQVVAVNT
AILPDFGGSNLGVPVARLRALLNAPTD
>gi|56696760|ref|YP_167121.1| methionine synthase I [Ruegeria pomeroyi DSS-3]
MTNVFAEMLASHDVLLADGATGTNLFAMGLQSGDAPELWNTDEPDKIRALYQGSVQAGSDLFLTNTFGGT
AARLKLHEAQGRVRELNRVGAELGREVADRAGRKVIVAGSVGPTGEIMEPVGSLSHAAAVEMFHEQAEGL
KEGGVDVLWLETISAPEEFRAAAEAFALAGMPWCGTMSFDTAGRTMMGVTSADMAQLVETLPNPPLAFGA
NCGTGASDILRTVLGFVAQGTERAIISKGNAGIPKYVDGHIHYDGTPELMGVYATMARDAGAKIIGGCCG
TMPAHLTAMRAALDSTPRGERPTLEEIVDKIGPFTSASDGTGDDAGPERRARGGRRRRA
>gi|56696761|ref|YP_167122.1| hypothetical protein SPO1885 [Ruegeria pomeroyi DSS-3]
MGKGCAASLWPTAIGPRMPRPLSLLPRPAGLMLRLVGSLVLTLWLVWLLADRLALLAPGEVIAALSGLPV
WRLAAALLATAVSFWALGRYDGVAHRHFRTGLAARQARLCGMAAIGFSQFVGCGVLSGSFARWRMIGDLT
PALALRLTTFVAITFLLALAFWASALCLIAPPLPGLRQTGVAGLALLLPITLVLFLLPRLRLGRFTLRLP
SLRALGAILGWAALDLAAAAAVLWVLLPALSWTDLPLLMSAYVLALAAGLLSGAPGGLGAFELTLLALLP
AIPGAELMAAVLAYRLIYVALPALAAVPLLLSPPDLRLGRQHRLPRRIHHHPPARPRAETAVVTQSRGYV
LSGGFADMAVVETDQSLIMLFDPVCGGRHPDLYLLARRAAQRNLFALVYKCSARVAVSARRAGWRVRHVS
DEATLVPADFTIAGSHRRQLRRKLRQAERAGLTVRRASTLPLTQMAAVDRLWQEANGRAWGLTMGRFAPD
YLARQAVFLAWRGARLEGFVSFHRSRDEWCLDLMRTHPDAPEGTMHALVATALAATAAARVPRLSLAAVP
AGRLGHRFDGLRQFKDSFAPRWQPLYMAAPGWTAIALAAADLARHVQAPPPLAAPDAQPAHDLDEEIEFA
SLTGT
>gi|56696762|ref|YP_167123.1| hypothetical protein SPO1886 [Ruegeria pomeroyi DSS-3]
MTTFDDREHAFEAKFAHDEEMQFKAQARCNKMLGLWAAGLMGKTGDEADAYAKTVVIADFEEAGHEDVVR
KVEADLDGLADADTIRAKMAELLPEAKAQIMGEAG
>gi|56696763|ref|YP_167124.1| phosphoribosylaminoimidazole-succinocarboxamide synthase [Ruegeria pomeroyi DSS-3]
MARRTKIYEGKAKILYEGPEPGTIVQYFKDDATAFNAQKKDVIEGKGVLNNRLSEYFMTGLAQIGVPTHF
IRRLNMREQLVRACEIVPLEVIVRNFAAGTMSKRLGIEEGTQLPRPIVEYCLKNDELGDPLVTEEHIAAF
GWASQQDMDDILSLALRVNDYLSGLMYGVGIKLVDFKIEIGRVYENDYPRLIIADEISPDSCRLWDIATG
QKLDKDVFRRDLGSLTDAYSEVARRLGVIPKTQIAKPTLIN
>gi|56696764|ref|YP_167125.1| phosphoribosylformylglycinamidine synthase, PurS protein [Ruegeria pomeroyi DSS-3]
MKARVHVMLKNGVLDPQGEAVRHALGAMGFDKVTGVRQGKVIDLDLVEGATEADVAEMCEKLLANTVIER
YEIELV
>gi|56696765|ref|YP_167126.1| alcohol dehydrogenase, zinc-containing [Ruegeria pomeroyi DSS-3]
MRAAQLTAWRQPLTLATLPDPTPGPGEVVLRVLACGVCRSDWHAWTGADPDVELPLVPGHEFCGEVVALG
TGVSRWRLGDRVIAPFILACGRCGDCAAGHQTICANQQVPGFTRNGAFAELIAVPFADTNLTALPDSLPP
HVAAGLGCRVTTAWQALVGRAELRPGEWLAVFGGGGVGLSALLLGRALGARVVVVDVVEDKLTHAKSLGA
DAVVNAADTDAAEAVRELTGGGAHVAVEALGIAATMTGAMRSLRKLGRLVMIGMPAGEHTAMTLPMDVLY
SGQLTLQGTRGMPAWRYPSLLSLIDGGHVDLSPLVTRTIALSQASDELAAFDRPAPPGVAVITDFAT
>gi|56696766|ref|YP_167127.1| phosphoribosylformylglycinamidine synthase I [Ruegeria pomeroyi DSS-3]
MRAAVVVFPGSNCDRDLAVAFEQAGFDVSMVWHKDADLPQGIDIVGIPGGFSYGDYLRCGAIAAQSPICK
AVVAHTARGGYALGVCNGFQVLTETGILPGALLRNAGLKYICKTVGLKVETSNSVFTEGYNAGDVIGIPI
AHHDGNYYADDETLAALKAEDRIAFTYTDNPNGARDDIAGILSANRRVLGMMPHPERAADAGHGGTDGVA
LFRALAGALTPA
>gi|56696767|ref|YP_167128.1| C4-dicarboxylate transport sensor protein DctB, putative [Ruegeria pomeroyi DSS-3]
MSTPRTDPKGQSWIRSGQLSWRVRAALVLVLVSATATVWITNRLLTDRFTESTRNRAELRLALYSGNLLS
ELRRNAIVPQLLARDPTLIAALQSSDFSQSTQRLISFVEEIGAASLMLLDRDGRTVAATDRNRLGEQHRS
AAYFVDPVRSNATVFSTIQREAGGYSFTYSRRLEDSSGVLGVIVVEVDLQKFERAWSGISDAVFVTNSAG
TIILATEPRWRGLNQAEALRRQTPENAIERAIRATADWTALPADAYLRGEAVMRMDSRIPFRGWQMTSFT
TYASIRERVNGVLALEIMGFAILLALSFYALSRRTAFRAALFQRESAELRALNARLQREIAERERVQKTL
EVAEQTLAQSSKLAALGEMSAAVSHELNQPLAAMKTYLAGARLLLRRNRPEEALSSFGRIDDLIERMGAI
TRQLKSYARKGQEALSPINMGDALGASLAMMEPQLRQRQVQITQILPDRPVLVMGDRMRIEQVMVNLLRN
ALDATKSVRDPEVEIILAAGETATLTVRDNGHGIRNFENIFEPFYTTKQPGDGVGLGLAISSGIVNDLGG
RLTARNGQHGGAVFEMQLPILEDGLEAAE
>gi|56696768|ref|YP_167129.1| C4-dicarboxylate transport transcriptional regulatory protein DctD [Ruegeria pomeroyi DSS-3]
MAQAMKIAIVDDEQDMRQSISQWLALSGYDTETFASAEEALKVLGSEYPGIVISDIKMPGMDGMQFLKKL
MGADSSLPVIMITGHGDVPMAVEAMRVGAFDFLEKPFNPDRMSDLAKRASNARRLTLDNRALRRELSDGG
QIMKKLIGTSPVMERLREDILDLGQADGHVLIDGETGTGKTLVAHALHAVGSRAGKKFVLVSCSALEEEA
LAKRLFGPMIPEDAQLPAIEEARGGTLVLEDVESLSDALQAKLLSVMNQQGTPAETRIVAISNLQEAGKT
SEDVLRPDLFYRLAALRLTMPPLRQRGEDILTLFTRLSEQFAEEYGCDAPQVSAQEAAQLLQAPWPGNVR
QLINIAERAVLQARRGSGTIASLLMSDHEDMQPVMTTEGKPLKEYVEAFERMLIDNTMRRHKGSIAAVMD
ELCLPRRTLNEKMAKYGLQRSDYL
>gi|56696769|ref|YP_167130.1| ribonuclease [Ruegeria pomeroyi DSS-3]
MAKKMLIDATHAEETRVVVVDGNKVEEFDFESENKRQLAGNIYLAKVTRVEPSLQAAFVDYGGNRHGFLA
FSEIHPDYYQIPVADRQALMEEERAYAEAQKARDEDEEGGKSRSKPKRSRSRSRSKAESLRSSDPVETMD
VSETEISGMETIDLDEGDDRDDIDLIEGSSPMERVAETPVEEPEDGADETVDQTADQAADEAADAAEDTD
TTETDGETAQDNTEDRADEADDEDEDDGEDAPRPRRGKADAASKDDSIESIAEEDDAEDLRPARKPRARK
YKIQEVVKVRQVMLVQVVKEERGNKGAALTTYLSLAGRYCVLMPNTARGGGISRKITNAVDRKKLKEIAA
EMDVPQGAGLIVRTAGAKRTKAEIKRDYEYLQRMWEQIRELTLKSIAPAKIYEEGDLIKRSIRDLYNRDI
DEVLVEGEGGYRIAKDFMKMIMPSHAKNVQRYEDQLPLFARFQVESYLNSMFNPTVQLKSGGYIVIGVTE
ALVAIDVNSGRATKEGSIEETALKTNLEAAEEVARQLRLRDLAGLIVIDFIDMDERKNNAAVEKRMKDKL
KTDRARIQVGRISGFGLMEMSRQRLRPGMIEATTQPCPSCHGTGLIRSDDNMALSILRQIEEEGTRRRSR
EVLVRCPVGIANYLMNQKREHIAQIEARYGLSVRIEGDAHLVSPDFSLEKFKTATRSVPQVQAPVVSVDS
RLMDQIDADEAFEEEDEAEEVRTEPRGETAGEGDGDGKPKRKRRRRRRRKNGGNGGEDSTADGDSGEIGD
EAAEDAADAAPEAAEDAAVTEAEAEPAAAEGGEAEVEAVAEAEAEAEAPAKTPRKRTRTRKKPVKAEAAA
EAPADAMASADVPAVEGDAGETPAEADAEAEAAPVKKTPKPRKPRSRSKKAEAPAEAAEASVAAEAPAAE
SVEAEPATAVEATAPEAVAETVVDEAAQPAEDAIAAPAEPEAAPEPEVAQAEPAAPEMAVAEAEAEPDGP
PKPKRRGWWSLGQ
>gi|56696770|ref|YP_167131.1| SirA family protein [Ruegeria pomeroyi DSS-3]
MTDDFETLDALGLLCPLPVLKARKRLKSMAPGAVLRLLADDPAAVVDVPHFCAEAGHALIGQDEAPDHQI
YLIRKAD
>gi|56696771|ref|YP_167132.1| cytochrome c-type biogenesis protein CcdA [Ruegeria pomeroyi DSS-3]
MFELEIIDAGLLPAMFVALLGGIVSFLSPCVLPIVPPYLAYMSGVTLGEIQDQAAARRKATLAALFFVLG
LSTVFLLLGFTASAFGAFVLSNQELFAKVSGVVVIVFGLHFLSVFRIPLLDREARMQTGDAGGSVFGAYV
LGLAFAFGWTPCIGPQLGAILSLAASEASVARGTLLLGVYAAGLGVPFLLAAMFLSRSMALMNRIKPHMG
LIEKVMGGLLLFVGIMLVTGLFTQFSWWLLEAFPALAELG
>gi|56696772|ref|YP_167133.1| hypothetical protein SPO1897 [Ruegeria pomeroyi DSS-3]
MSSVPSAGQVRRRRVFYIPGYDPIHPRRYRELYRKESAEQARISGYSVTLKPKTTKGPYGWHVRSEQDGA
EVAADVEVLVWSDIVRGSMSNTIPATYAQLARTAWTYIASGVLWRLMRLRKGPVIAALYPVGMLLAQLFA
ALFLVWLGWRLGGLTGWPLAALAGMGVGAGAGVYLLRWFRSKDGTFFAYYLMHDYAYSARWRGANPPELE
ARIGDFAERIAGALASDADEVLVVGHSSGAHVGVSVLADLIRAGRVPADGPALGFLTLGQVVPMVSFLPE
AQRLRADLHYLCTRDELAWVDVSAPGDGCAFALCDPVSVSGVAPATGKRWPLVLSAAFTKTLSPARWAEL
RWRFFRLHFQYLCAFDQVGDYDYFRITAGPQTLAARYRDRAPSKSRIERAVSKYTDMGAS
>gi|56696773|ref|YP_167134.1| cytochrome P450 family protein [Ruegeria pomeroyi DSS-3]
MIPPKPPARPDKVSLWRYLRLFRQDLLSAQPARLYRAWMAEFRTPFFRSYLVNQPDLVDTVLKGRPDDFP
KSNRISEGLRPLLGNSVFLTNGETWKRQRRIIDPAFEGGRLRDTFPAMWAASEAAVNRLAAQAGQETEIE
EVTSHAAADVIFRTLFSIPIEHEVAAQVFTRFRAYQRAQPLLNLAAFVPVPQWVPRFHSRETRRNAAVIR
GLIRQLTDTRMGEIRAGTAPDDLATKIMTTTDPQTGDRFDTDEMVDQVAIFFLAGHETSASALAWTLYLM
ALYPDWQEKLAEEARTLDSGTDFSVMSKLRLSRDVFREALRLYPPVPMMVRETTCPERFRDRDVPKGAQI
VLSPWHLHRHERLWERPDDFDPARWQTENGKTCQRNAYMPFSAGSRVCTGAGFAMVEGPLILSMLLLRFR
FERIAGREPVPVAHLTVRAADGIWLRVVER
>gi|56696774|ref|YP_167135.1| fructose-1,6-bisphosphate aldolase [Ruegeria pomeroyi DSS-3]
MSKAQMREQMANGAGFIAALDQSGGSTPKALALYGVDAAQYGSEEEMFAEIQRMRARIILADDFTSKKVI
GAILFERTLGESIEGRGVADYLWNVKGVVPFLKIDKGLEDEANGVQMMKPIPGLAATLAKAEGVFGTKER
SVIHEANAEGIAAVVAQQFDVAREVIAAGMVPIVEPEVNIHSTTKAQAEEMLKDEILKNLDTLGEGQDVM
LKLTIPSTANLYDVLADHPRVVRVVALSGGYSTDQACDLLSRNGKMIASFSRALTEGLSKQQSDAEFNTA
LGGNIDKIYRASL
>gi|56696775|ref|YP_167136.1| DNA-3-methyladenine glycosylase I [Ruegeria pomeroyi DSS-3]
MSSTIPGPDGQPRCRWCNSAPEFFDYHDREWGYPVGDDRRLFEKLCLESFQSGLSWRTILAKRENFRAAF
DGFDWTRIAAYDAADVARLLDDAGIIRHRGKIEAVINNARRMGDLLAEHGSLAAYVWSYEPKPEDLPEPQ
TASIIPASTAMSKDLKKRGWKFVGPTTVFAFMQAMGLVNDHARGCVMRDKAADLRAGFTPPK
>gi|56696776|ref|YP_167137.1| hypothetical protein SPO1901 [Ruegeria pomeroyi DSS-3]
MFLILLKFSTNKARAPEVMADHVAWLKQGFDDGVFDLAGSLQPQLGGGILARAATRAEVEARVAADPFVI
EDVVTAEILELTPSRASADFTFLLPEVAA
>gi|56696777|ref|YP_167138.1| TetR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MVQAQTRDQIVAAADELFYRQGFAQTSFVDISAAVGISRGNFYYHFKTKDEILAEVIRLRLARTAQMLAD
WQGTGDSPRARIASFIDLMIMNRAKITRYGCPVGSLCTELSKLDHAAQGQANGLFTLFRDWLQRQFAEAG
CTTEAPALAMHLLARSQGAATLAQSFHDEGFLRSEVADMHRWLDNTLPMTT
>gi|56696778|ref|YP_167139.1| hypothetical protein SPO1903 [Ruegeria pomeroyi DSS-3]
MSGRPVKRSLTLRGHRTSVSLEDAFWRAFREIAKEKDMPINVLAGDIDAARDPETGLASAIRVYVLGWYQ
SRR
>gi|56696779|ref|YP_167140.1| hypothetical protein SPO1904 [Ruegeria pomeroyi DSS-3]
MGKPVNLNQFRKQKERAEKKARADENAVKFGRSKADKQLERARADKARRDHDGHEVEE
>gi|56696780|ref|YP_167141.1| fumarate hydratase [Ruegeria pomeroyi DSS-3]
MPADRYWGAQTQRSIQNFPIGWERQPVAIIRALGVVKKACALRNRETGALAQDLADAIVAAADEVIAGRL
DDHFPLVVWQTGSGTQSNMNANEVIANRAIELLGGQLGSKDPVHPNDHVNMGQSSNDTFPTAMHVAAAMM
ARDVLLPGLYALLAGLEQKAEEFRDIIKIGRTHTQDATPLTLGQEFSGYAHQIRMGLTRIEAALPGIHEL
AQGGTAVGTGLNTRAGWAEAVAANMAEITGLPLVSAPNKFEALAAHDAMVFLSGAIATVAGSCYKIANDI
RFLGSGPRSGLGELILPENEPGSSIMPGKVNPTQAEALTQVAAHVMGNDAAIKFAGSQGHFELNVYNPMM
AYNLLQSMQLLGDAADSFTQRMLLGIRANTARIDQLMRESLMLVTALAPTIGYDNATTVAKTAHKNGTTL
REEAVRLGFVDAETFDRVVRPEQMIGPRD
>gi|56696781|ref|YP_167142.1| hypothetical protein SPO1906 [Ruegeria pomeroyi DSS-3]
MPAIPLSALTRPVLALLVSLLLVPAAFAGEAARFVGTYMGSAEVQRADGSTEMRDMDVTIEETKDGFTVS
WSTTIQKPDGRIKESDYSVDFLPSTRDGVFAAAMRRNVFGHTVQLDPMKGEPYVWGRISGDTLTVFSLFV
ADDGGYEMQQFDRTLAEGGLVLNFSRVKNGLPAKSVETFLQKQ
>gi|56696782|ref|YP_167143.1| hypothetical protein SPO1907 [Ruegeria pomeroyi DSS-3]
MSRDIDYGNLMHTAMRGLIKTVLADVAQHGLPGAHHFFITFDTRYEGVQLADWLADRYPGEMTIVMQHWY
ENLDVGEDGFAITLNFGDSPEPLYIPYDAIRTFVDPSVEFGLRFESPDFDEDDEDDIEVEEEPDAPKPDA
EVVSLDSFRKP
>gi|56696783|ref|YP_167144.1| chromate transporter [Ruegeria pomeroyi DSS-3]
MGCSIAGAGIGRFRTLRALRRQKGAGMTVKNSASGPLSDSATTAPPALAEMARVFGRIGLLSFGGPAAQI
ALMHRELVETRPWLDEQTYLRALSLCMLLPGPEAMQLATYAGWRLRGVTGGLLAGALFVLPGALVIAALV
AVYVQVGSVPLVQAGFLGIKAAVIVIVIEALRKLAARTLKTPAAWILAGLAFVAIFALSLPFPLIVLAAA
LWGFARTAPGARAQTALPRPPYRSAALWLTLWLGPLLLLERFGAPLLADIGWFMAKLAVVTFGGAYAVLA
YMTQTVVDQYHWITTAQMIDALGLAETTPGPLILVTQFVAMLSAYLDGGASLAALAGLVALWATFVPCFL
WIFTAAPYLDHIAGRPRPAAALAAITAAVVGVILNLSLWFALHVLFSDVSVLRAGPVSLPAPQLSSFDPL
ALALAALAAVWLILLRRGMGETVLLLALAGAGSHFL
>gi|56696784|ref|YP_167145.1| hypothetical protein SPO1909 [Ruegeria pomeroyi DSS-3]
MAATMEALMNKSELLKEWYARVWEQGDVEAIDQFFAQDTMAEGLIPEMQVGADDFRDFVSAFRYHLGDIR
VDIPKTIENGDWLSAILHVHTSRADNGAPIEVTGQVMARYKDGKIVEAYNQFDLISLFEQLGQMPADTLP
ICMTGQRLEWR
>gi|56696785|ref|YP_167146.1| hypothetical protein SPO1911 [Ruegeria pomeroyi DSS-3]
MSGQIWTMFAATSPFSPEIWLRDVFDSKAVTHGQVIRRKTRDIERYVGMQRFLDEVRQRGFQAVQNREQV
IVFCNSAPIRRLV
>gi|56696786|ref|YP_167147.1| GntR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MQIDPNSATDLPVQIAQAIKDAIVSGALIVDERLPSEAELADQFKVSRPTVREALKRLAAQSLIRTQRGA
FGGAFVNRLSFEDAQAQQITTSTLLLSMNAVSFDTACEARFALERACAPLAAERRGDAHLAAMQAEIGRQ
GAPDLSDEAFCASDVAFHRALVDAACNPVLSYHLAGAVEAMQPLMNMITFTARSRGTIVALHARIAEAIE
ARDPALADTALVELMRYTMTLKDDVMAARAARS
>gi|56696787|ref|YP_167148.1| putative dimethyl sulfoniopropionate demethylase [Ruegeria pomeroyi DSS-3]
MASIFPSRRVRRTPFSAGVEAAGVKGYTVYNHMLLPTVFDSLQADCAHLKEHVQVWDVACERQVSIQGPD
ALRLMKLISPRDMDRMADDQCYYVPTVDHRGGMLNDPVAVKLAADHYWLSLADGDLLQFGLGIAIARGFD
VEIVEPDVSPLAVQGPRADDLMARVFGEAVRDIRFFRYKRLAFQGVELVVARSGWSKQGGFEIYVEGSEL
GMPLWNALFAAGADLNVRAGCPNNIERVESGLLSYGNDMTRENTPYECGLGKFCNSPEDYIGKAALAEQA
KNGPARQIRALVIGGEIPPCQDAWPLLADGRQVGQVGSAIHSPEFGVNVAIGMVDRSHWAPGTGMEVETP
DGMRPVTVREGFWR
>gi|56696788|ref|YP_167149.1| zinc-binding dehydrogenase family oxidoreductase [Ruegeria pomeroyi DSS-3]
MFNALVVDKDEESGKTQAAVKQLSLTDLPVGEVTVAVEYSTVNYKDGLCIGPGGGLVRKYPHVPGIDFAG
TVENSSDERYKPGDKVVLTGWRVGEAHWGGYSQKANVRADWLVPLPEGLDTRQAMAVGTAGFTAMLAVMA
LEDHGLTPGHGPVLVTGAAGGVGSVATAILAHLGYEVAAVTGRPETADYLTSLGATQIVARDEINETVKR
PLESEIWAGCVDAVGGAMLARVLGQMKYGASVAAVGLAGGAGLPATVIPFLLRGVNLLGIDSVMQPYANR
LRAWERIARDLPMDKLEAMIRPATLSDLPGLGADILKGQVQGRVVVDVNA
>gi|56696789|ref|YP_167150.1| glyoxalase family protein [Ruegeria pomeroyi DSS-3]
MSYQPEHFLVWGELPVSDMTRSVDFYAKVTGADLTIDSSGPNPMAILKPADARTGVALHLYPGTPAGDGR
GPTLHLAAEGALEQIMTRVGEAGGEVISPAITIPAGRFFYAKDPDGNSVGFFETSPA
>gi|56696790|ref|YP_167151.1| aminotransferase, class V [Ruegeria pomeroyi DSS-3]
MALDIDFVRKQFPAFAEPSLHGQAFFENAGGSYTCQPVIDRLTRFYTQRKVQPYAPYEASRLGGAEMDEA
RARMAAILGVETDELSFGPSTTQNTYVLAQAFRQWMQPGEAIIVTNQDHEANSGPWRRLAEAGIEVREWQ
IDPETGHLNPEDLEDLLDETVRLVCFPHCSNVVGEINPVTEITAIAHAAGAFVCVDGVSYVPHGFPNVGE
LGPDIYLFSAYKTYGPHQGLMVIRRTLGELLPNQGHYFNADSLYKRFTPAGPDHAQVAACAGMADYVDQL
AAHHGITATDAAGRGAAVHDLMRAHEVTLLQPLLDAVRDRNSVRLIGPDRAEQRAPTVALAMNRPGEPVA
AELAQHGIMAGGGDFYAVRALAAMGVDPVQGVLRLSFTHYTSKDEIAQLIEALDRVL
>gi|56696791|ref|YP_167152.1| deoxyribodipyrimidine photolyase [Ruegeria pomeroyi DSS-3]
MSETRAIIYWLRRDLRLADHPGLAAAAASGRPVVPVFIHDESVAALGAAPAFRLGLGLERFGATLGDMGS
RLILRRGSAPAVLQALIAETGAGAVWWTREYTPQAITRDSALKTALQQAGIEARSFGGALLFEPWTVETG
AGGFYKVYTPFWRAVSQREVSAPDPAPARVRPPEAWPGSEALSDWGLGAPMRRGAAVVATHQAPGEAAAL
ERLDRFIATGIGQYDACRDLPAGDGTSTLSDALSLGEIGPRTLWHRAGEAAHKGAQGAETFLKQLVWRDF
AYHLMYHTPHLLSENWRPGWEVFPWATDPADPGFVAWTRGRTGVPLVDAAMREMYVTGRMHNRARMIAAS
YLTKHLMVHWKLGMDWFADCLTDWDPAANAMGWQWVAGCGPDAAPYFRIFNPETQAKKFDPKGRYRNHWI
AEGQAEPPRAALSYFDAVPRSWNLRPDASYPPPIMALDQGRRRALSAYASAFSQGSDGKLA
>gi|56696792|ref|YP_167153.1| cyclopropane-fatty-acyl-phospholipid synthase [Ruegeria pomeroyi DSS-3]
MILTSTEGQEGLPRYFPQVMKMLARMQAGRLDIALPDGRVFRSEGPEPGPVARVDIHDTDVFARLIREGE
LGFSDAYLEQDWSTPDLRAFMDLVHQGEETVYDGFTGQFLARAYERLRFWLQRNHRKQAKKNISYHYDLG
NDFYALWLDETMTYSSALFETGQESLEKAQEAKYASLLDEMGAQPGDHILEIGCGWGGFAEYAARQRGMR
VTGLTISQEQFKFARERIEKAGLSDQVHFKLQDYRDETGSYDGIASIEMFEAVGEKYWPVYFDTVRARLK
PGKRATLQIITVADRRWEIYRNGVDFIQKYIFPGGMLPAPGILREQVARAGLEFVQSREFGKSYDLTLRR
WYETFNDKWDQVAELGFDDRFRRMWNFYLTSCGAAFDTGTCDVTQMTVARPNHS
>gi|56696793|ref|YP_167154.1| tellurite resistance protein [Ruegeria pomeroyi DSS-3]
MPTAARLVAAFCLALLAFIVSEQVKPQLPEGTDFGYFNWVNTGLGILCGWVIMGPRAGRGAVSGINNGLT
GVGALVFWGLFVHGTYEMFRLAMRNRYDGPFDALLAIFEEAVEFGSALLVSHILVTLVIGAVISGLATDF
AWRRWR
>gi|56696794|ref|YP_167155.1| tellurite resistance protein [Ruegeria pomeroyi DSS-3]
MRFHQRIEIFVTDLFFYGTLRHAPLLEVVLGTTDPRPEITAASLPDHAVFSIQGQPFPMIQTAPGARAEG
LLVRGLTPLQLDRLNFYEGGFAYDLQAVEVTLPTGGSAKAQVFFPQEGLWSPEAPWHLADWVAEWAPLSL
HAAAEVMDFHGRLTPEQVGRSFPAIRLRAAARLAAAARPADPARDLSRDVVVERYSRAYVNYFGLDEIDI
RFRRNDGTMSDCLNRGALVTGQVTIVLPYDPVRDQVLLVEQFRVPVYMIGDPAPWMLEAVAGMIDPGETP
EQAAERELLEEAHLTAYRLEPAGKAYSSCGSSTQFSHLFLALADIRTETDSGGLASEGEDIRTVILSFDA
LMELIDTQQIKDLGLVAVANWLARHRDRLRG
>gi|56696795|ref|YP_167156.1| cysteine synthase A [Ruegeria pomeroyi DSS-3]
MRIARDLAEAVGHTPLIRLRRVSEETGCEIYGKAEFMNPGQSVKDRAALYIIRDAIARGELQPGGTIVEG
TAGNTGIGLALVGASMGFKTVIVIPETQSEEKKDMLRLAGAELVQVPAAPYRNPNNFVRYSERLARELAK
TEPNGAIWANQFDNTANRQAHVETTGPEIWEQTGGKVDGFVAAVGSGGTLAGVAEALQPKGVKIGLADPM
GAALFSYYTTGELAMEGGSIAEGIGQVRITRNLEGFKPDFAYQVPDAEALPYIFDLLRQEGLVMGGSTAI
NIAGAVRMAREMGPGHTIVTVLCDYGTRYQSKLFNPDFLREKDLPVPEWMSRAPSSIPGVFEDV
>gi|56696796|ref|YP_167157.1| mechanosensitive ion channel family protein [Ruegeria pomeroyi DSS-3]
MCSRTSDMALGRMLRVVLSAVLLLAATALSAQLSDESRAYYERWVRTAERAEDVIKANRASQAAFEQLRF
EIRGYRDTFNRVRGENSDRIKTLEAQISALGPKPGDGEAEAEDISRLRTHLNDQLARLTVPRIISEEAYS
RANGLINEIDRIVRARDTKELLRRGPSPLNPEYWTDAWKDIEQAMRALANEVAFNIRSDVVRERLRINGP
GILLLSVVGLVFLARGRKWSERAGDFLRSLGGVGTGVWSFVVSLLRILIPWIGVMFLVSALEMMDITGLR
GAILLEQVPYWAAAILYFNWIGRQVYLFNASTGFRHLSEAQVRVARICVDLLAVMLVLHDMVVLFERIEN
IPEATRAVAGFPVIVMTALLLLRLQRVRVQGQARNAALDGSETTRSGAGFSRMVGFLRRALYLLGIASPL
LAAVGYNNAAEALVYPAVKTLALIAVMVILQRFLTNVYGWLTRKGDDARDSLFSVILGFALALVALPLLA
LYWGAREAELTEIWARIMMGFDIGGVTISPSNFMTFALVFAVGYTITRLLQGGLRNSLLPKTRIDPGGQN
AIVAGTGYLGIFLAALLAITMAGFDLSSLAIVAGALSVGIGFGLQTIVSNFVSGIILLIERPISKGDWID
VNGQMGYVRDISVRSTRIETFDRTDVIIPNSDLISGSVTNYTRGNTVGRVIVPVGVAYGTDTRKVEAILR
EIAEAHPMVLANPAPNVVFQRFGADSLDFEIRAILRDVNWVLSVKSDMNHEINRRFAEEGIEIPFAQRDV
WLRNPEALSGKTPPPAAPAAASKAATLTEGDMDGGAADDY
>gi|56696797|ref|YP_167158.1| hypothetical protein SPO1923 [Ruegeria pomeroyi DSS-3]
MTTEPLFLQDAYLRQAPARVIGHTDEGGVILDRSLFYATGGGQPGDSGLLRWDGGEMTVATTIKAGEGAI
AVLPAEGATPPPIGTEVIQELDWERRHAHMRVHTALHLLSVVIPLEVSGGAIAADKGRLDFNMPEAPEDK
AALEQALQALIERDLAVSEDWITDAELDANPALVKTMSVSPPRGSGRVRLVRIGQGADQVDLQPCGGTHV
ARTGEIGPVRLGKIEKKGRQNRRVYLHLDG
>gi|56696798|ref|YP_167159.1| hypothetical protein SPO1925 [Ruegeria pomeroyi DSS-3]
MTAYTRPKRISLKNHPVYSENWVQDIIADDPSILGLGDLVLRDRERIQSRAGRLDLLLQDPETYKRYEVE
LQLGATDETHIIRSIEYWDIERKRYPQYEHCAVLVAENITSRFLNVVSLFNGAIPIIAIQMQVFEVGDHV
TLVFTKVLDELQRGLVDEDEDAISAPTDRAYWEKDKGTPKTVALMDRMFELVKEGDPESELKYNKFYVGL
IKEGRANNYVAFRPKKAFVLFEPKLPRSDEVDALLEDVGIETLEYATRWGNYRIRVTDADFKVHKGLFQD
LIEKARSYREG
>gi|56696799|ref|YP_167160.1| hypothetical protein SPO1926 [Ruegeria pomeroyi DSS-3]
MTPQDFITKWRNTELKERSASQSHFIDLCRLLDIEDPTTADPKGEWFTFEKGASKTSGGEGWADVWRKDC
FAWEYKGKRANLDKAFDQLLQYAIALENPPLLIVSDMDVIRIHTNWTNTVQQVHTLTLDDLKDAANRDKL
RNAFLNPDVFKPSKTRQLVTEQAAQNFANLAQRLRERGHDAQQVAHFVNRLVFCMFAEDVELLPNKMFER
MIKAARPDPASFAIHAKALFAAMKDGGLVGFEKVDWFNGGLFDNDDVLPLEWEDLDDLIRAAHLDWSDID
PSILGTLFERGLDPAKRSQLGAHYTDRDKIMQIVNPVIVEPLLAEWAEVKAQIEDLIDKAPKATKDKLLS
TSQKAARTRALDKAEALHQAFLDRLKAFRVLDPACGSGNFLYIALLELKNIEHRVNLEAEALGLPRGFPQ
IGPEVVLGIELSAYAAELARVSVWIGEIQWMRRNGFEAAKNPILRSLKTIENRDAVLNPDGTRADWPKAD
VVVGNPPFLGVYKMGEELGEDYTIALRDAWPEMPGAADLVTYWFAKAWSQMQCGDLSRAGLVATNSIRGG
ANRTVLKPIAEHGGIFDAWSDEAWTVEGAAVRVSMICFGSKLPSHPKLNGKVVDKILSDLTANAAGFDLT
KSSRISENKGVCIRGIETGGPFEFSQADFEALATKPLNPNGLPNTRVIRRILNGNNILKRQPERYAIDFS
DFRTKEEAALFEAVYSWLEQAYESYERKSKRRIVRRQDWWLHRRSGAALKNAVSRLSRFIVTPRVGKHRI
FVWLDSNALADSATFIVARDDETTFGILHSSFHELWSLRMGTFLGVGNDPRYTPSTTFETFPFPEGLTPN
IPADEYADAPRAIKIAAAAKRLNEFRENWLNPADLVDRVPEVVSGYPDRILPKNDAAAKELKKRTLTNLY
NARPAWLDHAHKALDEAVAEAYGWGDDWRAGVLTEDEILARLFKLNQERAAKEKA
>gi|56698719|ref|YP_167161.1| DNA-binding protein, putative [Ruegeria pomeroyi DSS-3]
MAENHLRRHAVEAVTGLSRSSIYAMMDAGDFPRPVRIGKRAVAWPQSAIEAWLANRPTSKGAE
>gi|56696800|ref|YP_167162.1| phage integrase family site specific recombinase [Ruegeria pomeroyi DSS-3]
MADGNQKIQRKAQSKRAEKALSAAFVRTVTKPGKYTDGHGLFLKVDDTGAKRWVQRIVIRGKRTEIGMGS
ASLVSLAEASETALQNRKLARAGGDPLQAKRTAQALLTFEEAARKVHKIHEPTWRNKKHAAQFISTLETY
TFPRIGKLKVSEVATADVLAVLQPIWLEKPETARRVRQRIGTVMKWAIANGWRTDNPAEAISQALPKQID
TQQHRKALPYDKVPEFLETLKASDAGDFTKLALELVVLTASRSSEVRKAEWSEFDLEQGIWTRPAERMKS
KKEHRVPLSPRALEILIEARELCTGEGLVFPGTKIGKPLSDMTLLKLTKALGYDVDVHGFRTSFKTWAQE
RTNTPRDVSEAALAHVLKDKAEAAYARSDFFEKRRKLMERWASYISSNLGSMARIA
>gi|56696801|ref|YP_167163.1| Tat pathway signal sequence domain-containing protein [Ruegeria pomeroyi DSS-3]
MQAGRRTGRNSHMTQSNSTGLTRRALLRAFTATAVAAAPTYSMAAGFLRGGGDIRRIRMYSGRTGERIDM
VYWIDGDYIKDAVKEINYFMRDWRVDQVKSMDLRTVDIMAAAHNLMDVNEPYMLLSGYRSPQTNAMLRSR
SRGVARNSLHMQGQAADLRLASRSVSQMANAAIACRAGGVGKYYRSNFVHMDCGEVRSWGG
>gi|56696802|ref|YP_167164.1| peptidoglycan binding protein, putative [Ruegeria pomeroyi DSS-3]
MPHLKRPAIRLTLTALLLAGVAVLASPGTADAQVTAYKQAVAEASYGEDGVAAFYRKNGYQPVWTGEGAE
FTARRIALIEALSMADVHGLPAGRYDINGLKAQMAAARTTRDMGLVEVALSREFARFARDLQTGLLTPSQ
IDDGMVRVVERRGAEAYLSELQAAEPGRYMRMLAPNTSQYRALLKLKLDLEQALATGGWGPTVAGGKLAP
GDGGPRVVALRNRLIAMGFMDRSAVASYDGTLQKAVQAFQLAHGLEADGVAGDGTLDEINKSVADRLKSV
IVALERERWLPRDRGERHILVNQTDFTAKIVDHGRVTFETRSVIGKNVSDRRSPEFSDEMEHMVINPSWY
VPRSIITKEYLPKLRANPNAVRHLEITDSRGRQVNRGAVDFSQFSSRSFPFAMRQPPGKSNALGLVKFMF
PNKYNIYLHDTPQKDLFAREVRAYSHGCIRLAQPFEFAYALLALQEADPKSFFHNVLNTGRETKVDLERH
VPVHIIYRTAVVDDRGQAGYRRDVYGRDAKIWEALSRAGVVLTAVQG
>gi|56696803|ref|YP_167165.1| UDP-3-O-3-hydroxymyristoyl glucosamine N-acyltransferase [Ruegeria pomeroyi DSS-3]
MSYSISQIAKALGAEAAGNLDLTVTGAAEPGDAGHDQLALAMSPKYAEALAKGGARAAILWPGAAWQAMG
LEAAIFAARPRLAMAGLTAMLDPGQGVASGIHPSAVIDPSAEIGADVSIGPLTVVGARARIGAGSVIGPH
CVIGMDAVLGEGAWLREMVSIGARATIGARFIAQPGARIGGDGFSFVTPEVSGAENARKTMGDQGEAKAQ
AWTRIHSLGAVEIGDDVEVGANCTVDNGTIRNTCIGDGSKLDNLVHVGHNTRIGRDCLLCGQTGVSGSVE
IGNNVVLGGQTGVVDNIYIGDGVIAGGGSKILSNVPAGRVIMGYPAVKMDLHTEIYKAQRRLPRLLRDIS
ALKKAVSKPGPSE
>gi|56696804|ref|YP_167166.1| acyl carrier protein, putative [Ruegeria pomeroyi DSS-3]
MSISDRVIAIIAEQAVLEPSDVSPESTLEDLGIDSLGLVESIFAIEEEFDISIPFNANEPSQSDFDISNV
AAIIAGIEKLVSEKV
>gi|56696805|ref|YP_167167.1| beta-ketoacyl synthase family protein [Ruegeria pomeroyi DSS-3]
MKRVVITGAGTINALGHSVPETLTAMREGKCGIGELEFRDVDRLAIRIGGQVRGFEAEGRFNRQQMSLYD
RFTQFTLTAAKEAIDQAGLAFHGELAAKSGVVLGTAGGGVSTWDENYRSVYEEGKNRVHPFVVPKLMNNA
AASHVSMEHNLKGPSFTVSTACASSNHAMAQAFSMVRSGMAPVMITGGSESMLCFGGVKAWEGLRVMSKD
ACRPFSANRNGMVQGEGAGIFVFEEYEHAKARGAEILCEVAGFAMSSDAADIVMPSKQGAARAMAGALAD
ARINPGEVGYINAHGTGTAANDKTECAAVADVFGRHADSLMISSTKSMHGHLIGGTGAVELLACIMALRD
WVIAPTIGYEEPDPECALDVVPNEAREAKVDVALSNAFAFGGLNAVLALRKV
>gi|56696806|ref|YP_167168.1| invasion associated family protein [Ruegeria pomeroyi DSS-3]
MIDEGRAAHLFDEAFMTKTLISLSAAALLALTGAAMAQDTTTQTETAPAPAQEEPKTADQLLDLGTPADG
APQLGQRYSKEKIGDWDMACIKTEAETDPCSMLQILTDAKGNPMAEFSMFRLEDGGVAVAGATVIVPLET
LLPAQLTISIDGAPGKRYNYSFCNPIGCVAQIGLTQTDIDAMKKGAKATVSLVPAPAPDQTVSLDLSLKG
FTASYDKVDVVSNN
>gi|56696807|ref|YP_167169.1| hypothetical protein SPO1934 [Ruegeria pomeroyi DSS-3]
MDGKIFLGGGGPDYGVAQGLDLKYANRHGLIAGATGTGKTVTLQILAQGFAEAGVPVFLADVKGDLSGMA
KPGSPDHKLHAAFTSRAEKIGLSDYAYRACPVTFWDLFGEQGHPVRTTVAEMGPLLLSQLLELTEAQEGI
LNIAFRLSDEEGLPLLDLKDLQALLVWIGENGKSLSLRYGNISTASVGAIQRRLLVIENQGGARLFGEPA
LDLADMMRVDDQGRGMVNILAADTLMASPRLYSTFLLWLLSELFEELPEVGDPEKPKLVFFFDEAHLLFD
DAPKALVDKVEQVARLIRSKGVGVYFITQNPADVPEDVLGQLGNRIQHALRAFTARDRKNLRLAAETYRE
NPAFDTEEAIREVGVGEAVTSMLMKKGVPGVVERTLIRPPSSQLGPITPAERKAILNTSDMAGKYDTPLD
RKSAFEILAKRAEEAAKEAEQAEERAEEASPWEREYNSARRYSGSRVGRSSARQTSSRRRSEDTLTSAMG
EAVIKELKGTTGRRIVRGILGSLFKGR
>gi|56696808|ref|YP_167170.1| branched-chain amino acid ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MTETVKNTALFLGIAVLVAITGFMQSWNSAILIVNMGLISAIMAIGVNLQWGFAGLFNVGIMGFVALGGL
AVVLVSEPLSPEAWSAGGFGIVLALLLGAATVVAAVLVARHMPKGRSRNLAMLAVLVLGFIIYRAVFDPN
VMAVEAINPAAAGNIGGLGLPVLLAWPAGGLLAAGAAWLIGKTALGLRSDYLAIATLGIAEIIIAVMKNE
DWLARGVKNVIGLPRPVPYEIDLQNDAGFVESAASLGIDPVTASTLYVKLGYSVLFMVVLLILLWMAQMA
LKSPWGRMMRAIRDNEVAAEAMGKDVTRRHLQIFVLGSAVCGIAGAMMTTLDGQLTPGTYQPLRFTFLVW
VMVIVGGSGNNFGAVLGAMLIWFLWVQVEPLGLFLMQVITSGMAEGSALKSHLIDSAAHMRLLTMGIILL
LVLRFSPRGLIPEK
>gi|56696809|ref|YP_167171.1| branched-chain amino acid ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MEILNALVALSNFVLIPAIAYGSQLALGALGVTLIYGILRFSNFAHGDTMAFGAMITVLVTWWMQSHGIS
LGPLPTALLALPFGILGCMALVLVTDRAVYRFYREQKAKPVILVIVSMGVMFIMNGLVRFVIGPNDQNFA
DGTRFLISARDFKKMTGLDEGLAIKTTQALTVVVAVICVALLFWFLNRTRTGKSMRAYSDNEDLALLSGI
NPERVVMYTWLIVAALATTAGVLYGLDKSFKPFVYFQLLLPIFASAIVGGLGSPLGAIAGGFVIAFSEVT
VTYAWKKVLGYLAPEGMSPDGLVQLLSTDYKFAVSFVILLIVLLFKPTGLFKGKAV
>gi|56696810|ref|YP_167172.1| branched-chain amino acid ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MSDNPYQDGRGNKDASITNTKGMGTMTPAHRKSGPTTKVDGGPFLIGDTMTGGYGKGPDILHDCTIAVNP
GEIAVIVGPNGAGKSTAMKAVFGMLDVRSGSVRLDGEDITRLTPQDRVVKGMGFVPQTNNIFTSMTVEEN
LEMGAFIRRDDIRETMEQVYDLFPILREKRYQAAGELSGGQRQQVAVGRALMTKPKVLMLDEPTAGVSPI
VMDELFDRIIEVSRTGLPILMVEQNAKQALAIADKGYVLVQGRNAFTGTGKELLEDPEVRKSFLGG
>gi|56696811|ref|YP_167173.1| branched-chain amino acid ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MCPGCFNDKRPHLFSGDEATTNKAAKHKAAPGEHMIVVEDVHKHFGGFHAVDGATLEITKGSVTGLIGPN
GAGKTTLFNVIAGVLPPTSGKVTMDGEDITGLPPHELFHKGLLRTFQIAHEFSSMTCRENLMMVPGGQSG
EALWNTWFGRKRIADEERALRAKADEVLEFLTIEHLADHKAGQVSGGQKKLLELGRTMMVDAKIVFLDEV
GAGVNRTLLMTIADTILRLNKERGYTFVVIEHDMDFIGKICDPVICMAEGRVLAQGTLDEIKANEHVIEA
YLGTGLKNKAQLEAGA
>gi|56696812|ref|YP_167174.1| branched-chain amino acid ABC transporter, periplasmic substrate-binding protein [Ruegeria pomeroyi DSS-3]
MKKLLTATAASALMASAAFAGGHAKEVKIGVILGFTGPIESLTPSMADGAELAMKEVTDSGLLLDGATVT
SVRADSTCVDAAAATAAAERLVTSDKVDGIMGADCSGVTGAILSNVAVPNGVVMISPSATSPALSTADDN
GLFFRTAPSDARQGVVMTEVLMEEGIKEVALTYTNNDYGKGLADSFQAAFEAAGGTVTISAAHEDGKADY
SAEVGALAAAGGDRLVVAGYVDQGGSGIVRSAIDSGAFDTFHFPDGMIGAKLEENFGDEIEGSSGQHPGT
DSPGVAKFSEMVGGAFDSTSPFTPEAYDAAALIMLAMQAANSKDSGDYKDHVMHVANAPGEKIYPGELAK
ALQIIKDGGEVDYVGATAVELIGPGESAGNYRQITIEGGKITTAKFR
>gi|56696813|ref|YP_167175.1| hypothetical protein SPO1940 [Ruegeria pomeroyi DSS-3]
MTFARISCVILTVAALLTSDRAGAELSSRAGPLKVEMMAEGLDSPWAVAPLPGAGFLVTERGGDLLYVNG
AQRVRVSGTPRVRVAGQGGLLDVTLARDFASSRRLYLTYAQPQPGVGAGTAVAVARLSEDKRRLTGLSRI
YEVPPGGQGGRHFGSRVVEAADGTLFVTLGDRGADASAQDPGNPQGSVIRIHPDGRIPSDNPFVGQSGIR
PEVWSLGHRNPQGAGLDAQGRLWTSEHGARGGDEVNLIRPGANYGWPVISYGRHYSGARIGEGTHKEGME
QPKFHWDPSIAPSGLLVYSGTLWPAWKGDIFVGSLKFDHIVRLTGSPLREAERIEGPETERLRDIVEAPD
GAIWFISEGRGAVYRISPAS
>gi|56696814|ref|YP_167176.1| AraC family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MESGQKKPQRFVFVLLDQFTMLCFACAVEALRIANRMAGQQLYEWSVVGEGGASATCSNGTVFKLDGDLE
ELRREDVVLVCGGIDVQKATTKKVVGWLRREARRGPVIGGLCTAGYTLAKAGLLDGKRATIHWENQDSFV
EEFEEVTLTKSVFVIDGARITTAGGTASIDLMLKLIANTHGEELANAVADQLIYSSIRTDQDTQRLSTPT
RIGVRHPKLSQVIQMMERNIEEPISPALLAKDVGMSTRQLERLFRRYLSRSPKRYYMELRLQKARNLLMQ
TDMSVINVALACGFASPSHFSKCYRAHYNTTPYRERGAQSTRLSV
>gi|56696815|ref|YP_167177.1| 3-deoxy-7-phosphoheptulonate synthase [Ruegeria pomeroyi DSS-3]
MNTIAEMRAMSEWQKSNWRAKPRVQMPDYTDQAELARVEAQLSQFPPLVFAGEARRLKRHLGAAGRGEAF
LLQGGDCAESFDQFSADGIRDTFKVMLQMAMVLTFGAKVPVIKVGRMAGQFAKPRSAPTEVLDGVELPSY
RGDIINELAFTPEARMPNPQKMLQAYTQAAATLNLLRAFSTGGFADMNRVHSWTLGFTDEQDVQKYSEIA
DRIQDTIDFMGAAGITADTTHQFSTVEFYTSHEGLLLEYEEALTRLDSTSGNWLAGSGHMIWIGDRTRQP
DGAHVEYCRGVLNPIGLKCGPTTTAEDLKVLMAKLNPENEEGRLTLIARFGAGKAGDHLPRLIKAVREEG
AKVTWVCDPMHGNTIKSASGYKTRPFESVLREVRDFFAVHQAEGTVPGGVHFEMTGQDVTECTGGVRAVT
DEDLSDRYHTACDPRLNASQSLELAFLVAEELTRLRADQRRRAAG
>gi|56696816|ref|YP_167178.1| hypothetical protein SPO1943 [Ruegeria pomeroyi DSS-3]
MVMKTFFGGRSRADRGDGAGNVIAMDRFRSGRTVSPLRQAEAYWSALRVGDGVPRRSDIDPRGLENILEY
TFILERIAPGVARFRLAGSHLSEMAGMEVRGMPLTAFFTAAARSEIGATLEHVFDTPAICEMSLRAERRF
TAPRVEARMILLPLQSDFGDVSRALGIMISDGPLGTGGRRFEISESVLRDLPEVAQPDAASAAPQAAGFA
APQADFVKGKPQLRLVSSEE
>gi|56696817|ref|YP_167179.1| hypothetical protein SPO1944 [Ruegeria pomeroyi DSS-3]
MIRSMTGFASARGEMAPFSWSWELRSVNAKGLDLRLRVPDWLEGLETAIRADLGKALGRGSVTLSLRLSR
GEEGAALALNPAALSAVLDALSEVEDQAMTRGMTLAPSRAADLLALRGVLEAGGGSDDPAPLVKRLKAEL
GPLIAAFLQMRETEGAALAEILQGNLIRVADLTAQAAALAEARKPLVAETLRANLARVLDNTDGADPDRV
AQELAMLAVKADVTEELDRLQAHIKAARDLLAKGGAVGRKLDFLMQEFNREANTLCSKSQNADLTGVGLE
LKAVIDQMREQVQNVE
>gi|56696818|ref|YP_167180.1| guanylate kinase [Ruegeria pomeroyi DSS-3]
MTDRRGLLIILSSPSGAGKSTLARRLMSWDPGLKFSVSATTRAPRPGEEHGREYYFLSEDQFKGQVRRGE
MLEHAHVFGNFYGSPAGPVRDTIEAGQDVLFDVDWQGEIQIRNSDLGKHALSIFILPPSIKELRRRLESR
GQDSAEVISRRMLKSWDEISHWGYYDYVLINDDLDATEERLKTIVSAERMRRIQQPALQEHVRKLQSEFE
DLS
>gi|56696819|ref|YP_167181.1| transferase family protein [Ruegeria pomeroyi DSS-3]
MTIYALGEHRPEIHPDTWVAPDANLIGKVVLEEGASVWFGCTIRADHEEIRIGQGSNVQENCVMHIDAGY
PLTIGANCTIGHKVMLHGCTIGENSLIGMGATVLNGARIGRNCLIGAGALITENKEIPDNSLVMGVPGKV
VRQLDEAAVARIAWSAKHYQDNMRRFRDSMIAVG
>gi|56696820|ref|YP_167182.1| phosphate regulon sensor histidine kinase, putative [Ruegeria pomeroyi DSS-3]
MPEDLNHEFLAAMPLAALLVDQAERIIAANTEAQTLLGQQIVGRHYATILRQPQVIEAIERALRDKGSSR
SRHLANDGAQDTTFEVTCRYVNGIGAVAGGAVLVSFIDVTPMEQAGQMRRDFVANVSHELRTPLTAIMGF
IETLRGPARNDPAAQDRFLGIMEQEAGRMNRLVGDLLSLNRVESEERVRPRGAVDLSGQIASTLNSLRPL
AAEAGVELYFTGPETPVIVPGDEDQIRQVLTNLIENAIKYGGSGGEVRVTLSEAERDPAVRGPAARIQVS
DKGAGIDAVHLPRLTERFYRADNHRSRQKGGTGLGLAIVKHIVTRHRGRMRVESTLGSGTTFTVILPK
>gi|56696821|ref|YP_167183.1| phosphate ABC transporter, periplasmic phosphate-binding protein [Ruegeria pomeroyi DSS-3]
MSFVKLSASALAIAAVSATAAAARDQVQVAGSSTVLPYASIVAEAFGENFDFPTPVVESGGSSAGLKRFC
EGVGENTIDVANASRKIKDKEVAVCAENGVTDIIEVRIGYDGIVFASDIAGNTFEFTPSDWFLALSDKIM
VDGQLVDNPNSTWADVNAAFPAQPIQAFIPGTKHGTREVFEDKVILAGCEATGAFEALKAANGDDKKAAE
KACIALRTDGVSVDIDGDYTETLARIESNKDGIGVFGLAFYENNTDKLQVATMSGIVPSTESIATGEYPV
SRPLYFYVKKAHIGVIPGLKEYAEFFIADEIAGPDGPLAEYGLVSDPELAKTQEAVADEKVIGGNS
>gi|56696822|ref|YP_167184.1| phosphate ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MMPTLWLVLFLLLLSTFGFFAGRARALSSAGGDARKLHSLPVYYGLNVALTGLVPALGVLAVWLLAQPML
IDNRVSGLIPEDSIPAELTRDLVMSDVRRVAEGLDVAVAQGALSEAEVGALKAGSSGIRARLGEVGVALG
SDVRPEVLAAARTYRALSHTGTLVMGAVVAGLALAGLAWSYMRTHHDYRARNVVERGVLALLILAASLAI
LTTIGIVLSMLFETANFFGLHDWRDFFFGSTWAPNFRGDSELSILPLLWGTLFISLIALLVSVPVGLFAA
VYLSEYAGKATRSFAKPLLEILAGIPTIVYGLFALLTVGPMLADIFGNGGALGVNWMAGATSVLTAGVVM
GIMLIPFVSSLSDDIINAVPQSMRDGSLGLGATRSETVRSVVLPAALPGIVGAILLAASRAIGETMIVVM
GAGAIAKFSLNPLESMTTITTRIVSQLTGDTDFASPETLVAFALGLTLFVLTLGLNVLALYIVRKYREQY
E
>gi|56696823|ref|YP_167185.1| phosphate ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MTDLTPDAAPGRRHAASLLTPDARTRRRNRAEARFRAYGMGAILIGLMMLAVLVFTIVSRGTGAYTQTFV
TLDVELLESKLDKKGTRDIEAIKKVSTFGYAPLINAAFETAMDKAGIETALKPKDQAAILSKRAAAQLRD
YVIADPERIGQTVSFRFLANSRVDGYLKGRVTRESIANDKSISTEQLDFVDQLIAAGMIRKTFNLDFILG
SDASDQRPEAAGMGVSMVGSLFMMLVVLVLALPIGVAASIYLEEFAPKNWLTDVIEVNISNLAAVPSIVF
GILGLAVFINYMHLPMSAPLVGGLVLTLMTLPTIIISTRASLKSVPPSIRDAALGVGASKMQAVFHHVLP
LAAPGILTGTIIGLAQALGETAPLLLIGMVGFIASNPPDGIAAGLLSPNSAMPAQIYEWAKRADPAFYER
AWGGIIILLVFLVTMNTLAVILRRRFERRW
>gi|56696824|ref|YP_167186.1| phosphate ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MNAAGRRRQTMNDMSRVERAVESKQTKMECRDCHVYYGDTHAIKNVNVDIADKTVTAFIGPSGCGKSTFL
RCLNRMNDTIAGARVQGSFQLDGEDIYDKRVDPVQLRAKVGMVFQKPNPFPKSIYDNVAYGPRIHGLARN
RAEMDEIVEKALRRGAIWDEVKDRLDAPGTGLSGGQQQRLCIARAIATEPEVLLMDEPCSALDPIATAQV
EELIDELRQNYSVVIVTHSMQQAARVSQKTAFFHLGQLVEYGETGQIFTNPEDPRTESYITGRIG
>gi|56696825|ref|YP_167187.1| phosphate transport system regulatory protein PhoU [Ruegeria pomeroyi DSS-3]
MAQQHITSVYDRELEAIQAHIMKMGGLVEAAIMAAARSLETRDAELANEVRAGDKAIDALEELINQETAR
LIALRAPTASDLRLVLTVLKIAGNLERIGDYAKNIAKRTTVLVDQPQVGDSAAALRRMAREVELMLKDAL
DAYIQRDAELGADVIERDHEVDQMYNALFRQFLTFMAEDPRNITPCMHLHFIAKNVERMGDHVTSIAEQV
VYLVTGNRPDEMRPKGDVTSTTA
>gi|56696826|ref|YP_167188.1| phosphate regulon transcriptional regulatory protein PhoB [Ruegeria pomeroyi DSS-3]
MSADQPSVLVVEDEMAQREVLAYNLEAEGFRVIRAENGEEAMLLVDEDTPDIIVLDWMMPNLSGIEVCRR
LKTRPETRSIPVIMLSARSEEVDKVRGLETGADDYVVKPYSVVELMARVRSQLRRVRPSTVGLRLEYEDI
VLDAETHKVSRSEKPLKLGPTEFRLLSTFMEKPGRVWSREQLLDRVWGRDIYVDTRTVDVHIGRLRKALT
QHGGDDPVRTVRGAGYALG
>gi|56696827|ref|YP_167189.1| LysR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MLTSRKFFPSLSSLRALEALDRLGSASAVAEELALTQSAVSRQLQTLEGQMGVELIRRDRKRLSLTPAAQ
DYVTEIREALNRIAQASLRLQVAPAGGTVNLAILPTFGMRWLMPRLPEFSRLHPDITINMTTRLRPFNFA
SEPFDAALHFGEPDWPGTDRLLLRAERVLPVCAPGLLPHGAPKSPADLLRLPLLHIQTRPRAWQDWFAQM
GVTCPETLPGTLYDQFATIGQAALHGLGVALLPNYVVEQDLATGRLVAAYPDAVETLGAYYLVWPRARGN
DPSLRAFRHWLAAQAEPEEGLPR
>gi|56696828|ref|YP_167190.1| glutaryl-CoA dehydrogenase [Ruegeria pomeroyi DSS-3]
MKTRKSLAVFLRFGKDMVPSDRISGVFPMDIAAKPALRDKDKPDLGGFDWEDPFRLADQLSEDERMIADA
ARAYAQEKLQPRVTQAFQTEHTDPDIFREMGEMGLLGTTIPEQYGGIGAGYVTYGLVAREVERVDSGYRS
MMSVQSSLVMYPIYAYGSEEQRMKYLPKLASGEWIGCFGLTEPDAGSDPASMKTRAVKTEGGYRLTGTKM
WISNAPIADVFVVWAKSDAHDGKIRGFVLEKGMKGLSAPKIENKMSLRASITGEIVMDGVEVGEEALLPH
VSGLKGPFGCLNRARYGISWGVMGAAEACWHGARQYGLDRKQFNRPLAQTQLFQLKLANMQTEIALGLQA
SLRVGRLMDEAKAAPEMISIIKRNNCGKALEIARHARDMHGGNGISLEFQVIRHMVNLETVNTYEGTHDV
HALILGRAQTGLQAFF
>gi|56696829|ref|YP_167191.1| sulfate permease [Ruegeria pomeroyi DSS-3]
MNQQLRGLARTYLPILDWGRSYGRGELSGDLIAAVIVTVMLIPQSLAYALLAGLPAEVGLYASILPLVAY
ALFGTSRALAVGPVAVISLMTASALAPLNLSSVSEYVAAAGVLALLSGAMLLLMGALRLGVVANFLSHPV
IAGFITASGLLIAASQLKHILGVPLHGHTLPEILLDLARHLGQINLATLVTGIVALAFLFWVRKGLAQVF
HARLGLTKPLAATLARVGPIFAVIGTTLAAWVLNLPSLGVAVVGEVPTGLPPLGLSGVDWGLVPALIGPA
ALLSIIGYVESVSVAQTLATKRKQRIDPNQELIALGAANISSSLSGGYPVTGGFARSVVNFDAGAETPAA
GVFTAVGLLVAALFLTPLLYFLPKATLAATIIVAVLSLVDLSILSRAWRYSRADFAAVFATIALTLLAGV
EVGVASGVLISLLLFVWKTSRPHVAEVGQVPGSQHFRNILRHKVETDPGVVTLRIDESLYFANARRMEDL
ILNRVLRDRDSLRHVILMCSAVNEVDFSALESLEAINRRLDDLGVKLHLSEVKGPVMDRLARSHFLEDLT
GRVFLSQYDAFAALRMNRADRM
>gi|56696830|ref|YP_167192.1| short chain dehydrogenase/reductase family oxidoreductase [Ruegeria pomeroyi DSS-3]
MELKDRIVVVTGAASGIGRGLAERFAAEGAKCVVCADLNLQGAEDVAQAVGGVALRCDVSREADIAALIE
HVETQIGPIDLFCSNAGILTIGGIETPDADWQRIWDINVMSQVWAARHVVPRMIARGGGYLLNTASAAGL
LNQVGAAPYGVTKHASVGLAEWLAMTYGDDGIGVSVLCPQAVRSEMTRGHEESVAALDGLLEPSDVAEAC
VQAIRDRRFLVLPHPQVLDYIRMKTADYDRWLGGMRKLNRQFGGKL
>gi|56696831|ref|YP_167193.1| acyl-CoA thioesterase II [Ruegeria pomeroyi DSS-3]
MTDAERQLLDLLDIERLEVDLFRGTGSGGETPTRIYGGQVIAQALAAAYRTVEDRLCHSLHAYFIRPGDP
SIPVIYQVDRARDGGSFTTRRVVAIQHGRQILNLSASFHAGDDGWDHQHPMPEISGPETHPTRQALQERF
IDRIPQRYRAEFTRARPIEIREVAPRDMFEPIPTDDRHYLWFRMGAAAGAGPAMQHLLLAYASDMGLLGS
GLRPHGLSWYTRQVNGASLDHAMWFHAPIRFENWHLYAMDSPWTGAGRSFNRGKIYAEDGTLVASVAQEG
LMRRLKSEG
>gi|56696832|ref|YP_167194.1| acetoacetyl-CoA synthetase [Ruegeria pomeroyi DSS-3]
MRMTDPRPILWTPSNERAENSRMAAFQRWLAKERGLEFDDYNALWAWSVADLDGFWSAIRDFAGLPFEGG
DGRVLAERRMPGAVWFPGVTTNFARHMLRHAESRPEAPALILRSEGFGRKEVSWAQLSQKVANVAAQLRA
MGVGQGDRVVAILPNTDTAVVAFLAAASIGAIWSLCAPDMGHVAILDRFRQIAPKVLIAQDGYVHAGRTI
DRRPVLEEIRAQLPSLAQTVLVPVMGEVPPSMIPWEEMTQGAAQPEYADLPFDHPLWIVYSSGTTGNPKP
IVHGHGGILLEGAKQALHQDLGGDDRFLWLTSSGWIMWNAQFVAMGQGATVVLFDGAANHPDMQAVWRVV
AEERVSSFGVGAAYVTQCLKSGIRPREALDLSALKALGTTGSPLTAEGYDWVYDAVDPDIWLAPISGGTD
LCGAFVGGNVMLPVRAGEMQCRYLGNAVRSYDPEGNEITAEVGELVCTEPLPSMPLGFWGDRDGSRLHES
YFDTYPGIWRHGDWIEITPEGGAVIYGRSDATINRKGLRLGSSEIYRAVEALPEVLDSLVVDLEFLGRDS
FMPLFVVPAPGQVLDDALRARINTAIRETLSPRFIPNEIVQIAEVPRTLSGKKLEVPVKKLLLGGDPAQV
VNRDSMANPESFDFFVTYAAGRR
>gi|56696833|ref|YP_167195.1| beta-lactamase [Ruegeria pomeroyi DSS-3]
MPDPGYRTLDTGRLGRIAGWMQSYVDRRRYAGSSVLVSQGGHEVFFHTAGQRSIENQLPFTRDTLVRIYS
MTKPVTSLAVMMLAERGLFHLDAPVSTFLPSFSDMQALVPGASAIDQTEPAPSPTLHQLLTHTAGLSYPF
NPGVLARAMEEQDLLFKPGQGALADMADKVAALPLAFQPGSRWEYSVSIDILGRVVEVVSGRTLAQFFQD
EIFAPLGMTETGFSVPQGAGDRFASLYTPLAGDAMALNDAHSGGDTLRLFDEAGNSPFETASMYSGGGGL
VSSIDDYRRFAEMLRRGGAVDGHRLIGPATLDFMMRNHLPGDIASMGPQSFAEQPMDGMGFGLGGAVVLD
PARARTPGSIGDFSWGGMASTFFWLDRVNDLTVVFFTQLSPSSAYPSRSELKALIHGALCG
>gi|56696834|ref|YP_167196.1| IclR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MAEGKDRNFVTALARGLDVLRSFRPGEVLLTNTDLSERTGLPKPTVSRLTYTLCQLGYLVQDRQSGAYRL
GVGVLQLGMGVLAGLDICDRAAEVLRGLRTGANPYITAALGEVHRAEVIYVAVSRSRENVSLSMHVGSRL
PLFRSAIGRAILVGMEAEEREAAIAAGMRDLGVPEAELRSQIARAVEEYAVRGYCTGYGDWRADVNGIAV
PVLSLGGARLHGLNLGGPSFHVTQEELERVFAPLLIEAGRSLGMVP
>gi|56696835|ref|YP_167197.1| phosphotransferase family protein [Ruegeria pomeroyi DSS-3]
MSDTTQSLDLSAVDAYLRDHLPGYAGPLEARKFDVGQSNPTFLLATPARNYVLRRKPPGVLLKSAHAVDR
EFRVQRALADTDVPVPRMYLLCEDDAVIGSAFYVMEHLDGRNFAEPTMEGETNATRTAVIDEMNRVLAAL
HSVDIDAVGLSDYGPPGNYFERQISRWTKQYRASETGTIADMDALIEALGQDMPEDDGQRTLVHGDYRID
NMMFEKGGTRCLGVLDWELSTIGHPYADLAAVIMQWQMPPGREGRGLAGVDRAALGLPTDDEFIAAYCAR
RGIGGIDRFGFYLAFTFFRMAAIIQGVYKRALDGNASNPERARMLGQYVGVFAQNGLRALRG
>gi|56696836|ref|YP_167198.1| phosphoglycerate mutase family protein [Ruegeria pomeroyi DSS-3]
MAELIVIRHAQASFGSDNYDRLSELGHRQSELVGAALRETGWVPDRLVTGTLARQKETLRGMGFTDVPEE
HAGWNEYDFHDLLRVKFGGTIPDLVQHDRKTHFRTLRDVLREWQGGGVAGARESWAQFTARIEAARQAAT
REGAERVLVISSGGAIGQLTAAALSAPPEQMIALNLQVKNTAMSRFIFTPRAFFLHEFNATPHFAQPAHA
DMLSYS
>gi|56696837|ref|YP_167199.1| hypothetical protein SPO1964 [Ruegeria pomeroyi DSS-3]
MTWTRDESHLPPALRGLRIPLIGSPLFIISVPDLVIAQCKAGIVGSFPALNAREGEGEPPLLEAWLKRIT
EELDRHNQDNPDTPAAPFAVNQIVHRSNGRLERDLEICARWNVPIWITSLGARVEVNEAAHSCGGVVLHD
VINNTFAKKAIDKGADGLIAVAAGAGGHAGQQSPLALIREIRSWFDGPLALSGAIACGESLLAARALGAD
FGYMGSPFIATNEANAQPEYKQMIVDSTAEDIVYSSLFTGVHGNYLKKSVERAGMDPDNLPSADASSMNF
SQGSSKPKAWKEIWGSGQGVGDVHQIEPVGDLVDRIDREYRAAGARLAAEFIG
>gi|56696838|ref|YP_167200.1| short chain dehydrogenase/reductase family oxidoreductase [Ruegeria pomeroyi DSS-3]
MDIRFDGRVAIVTGSGAGLGRAHALGLAARGARVVINDLGAATDGTGASSDAAQAVVEEIRAMGGEAIAH
GADVADEAQVADMVAQTMAQWGRVDIVVNNAGILRDKTFAKMSMADFRKVIDVHLIGSANVAHACWPIMR
EQGYGRVVFTSSASGLYGNFGQANYGAAKAAMMGLMNVLHIEGARDNIRVNCLAPTAATRMTEDLIPEQA
LALLAPETITPGLLYLVSEDAPSRVILCAGAGCYAQTLIFETEGILLEGDANTPEEIAARFAQVQDEEGK
RELTDAFSQTRKFARKAADARGIDLPWGA
>gi|56696839|ref|YP_167201.1| short chain dehydrogenase/reductase family oxidoreductase [Ruegeria pomeroyi DSS-3]
MTPETLFSLHGKTALVTGGATGIGRMAAEALVCAGARVLIASRKGEACEAVAAELNAMGAPGTAEGFAGD
VGSKEGIDTLVAEVKSRTETLDILMNNSGVTWGAPLGQFPHEAWEKVMSVNVAGVFDLTQKLLPMLMKSG
TIDDPARVVNVGSVMGEVPMGDGAYSYAASKAAVIHLTKIMAKELSPYAVTVNALAPGPFVSRMTAFATA
DEEKRAKVGSDVPLRRVGRDEDIAGCMLFLCGRGGSYVTGAVIPVSGGINVMSGRNIFEKAL
>gi|56696840|ref|YP_167202.1| acyl-CoA dehydrogenase, putative [Ruegeria pomeroyi DSS-3]
MAKLVRSEEEVMLADAARGFLDQAAPVAHLRRLRDGEQTQDRALWSEMAAMGWAGVLVPEEAGGSDMGHA
AACALAGEMGKTLVASPFLSTAVIAATALRQVSDARAGQALARIASGELTYALAIDEGAKFAPEATQMQA
QAEGNGFRLNGEKRFVVDGANADRLLVLSRTDAGLTLFDLPAERDGITREAQAMIDSRDAARITFSDVIA
TGEDVLGQVDDAMSVLAPALRAGQAALAAEMAGLAAGAFGMTVEYLKERKQFGVPIGAFQALQHRAAHLW
CECEVTASAILNAGRMLDEDPDNAALAVSLAKARATDTAQRAVQEGVQMHGGIGMTDAFDMGFYMKRARV
GAEWLGDYGYHANIVAQARGF
>gi|56696841|ref|YP_167203.1| acyl-CoA dehydrogenase family protein [Ruegeria pomeroyi DSS-3]
MAEEDKAIAAFRDELRAWLEANCPADMRDGRNDEASICWGGKNWNFTSEAQRTWLQRCVSKGYTVPTWPI
EYGGAGLSRDQEKVFHQEMRRLNARYPLQSFGIWMLGPALLHFGTHEQKLHYLPPIARGEIRWCQGYSEP
GAGSDLANVQSRAEDRGDHWLVNGQKIWTSYADQADWIFALLRTDREAPKHKGISFILLDMTSPGVTTRP
IKLISGASPFCETFFDNVQVPREQVVGEVNRGWDVAKYLLTHEREMISAAGGSMGSGRALGAVLADSGST
DTVLRADAMRAEVDGLAVALTLERYKDQAEAGQGAGDASAMLKYMGTELNKRNLELVMAAGGSDALIWED
GRAPNWLRTKANSIEGGTSEVMLSIISKRVLGLPG
>gi|56696842|ref|YP_167204.1| zinc-binding dehydrogenase family oxidoreductase [Ruegeria pomeroyi DSS-3]
MKAMLSTAVGGPETLELTEMADPAPGKGELLVRVHAAGVNFPDTLMIRDLYQMKPPRPFAPGGEIAGEVL
AVGEGVSGYTPGDRVLALTGFGGFATHLTVKANVAVKIPDAMPYDEAACFIFTYGTSHHALKDRAALQPG
ETLLILGAAGGVGAAAIELGKAAGARVIAAVSSQEKAEFCRQIGADETLVYPRELDRDGQKALSGEIKKL
AGGDGVDVVYDAVGGAYAEPCLRAMAWQGRYLVVGFPAGIPSIPLNLTLLKGCQIVGVFWGASVFRDPKG
HAANVGDLFRLYAEGRIKPQICARFPLDQAGAALEMMQDRKVLGKVVITP
>gi|56696843|ref|YP_167205.1| phosphoglycerate mutase family protein [Ruegeria pomeroyi DSS-3]
MTREYRQTVYAPPAGAVDLLLIRHGESQPARPGEPFPHVDGQGDPALHPEGEAQAHAVGTRLKGEPLAAI
YVTTLRRTHQTAAPLAAHLGLAPLVEPDLREVFLGDWDRGEYRIRAANDDPAFLRARERQEWGEIPGAET
TAQLHARVRAGLLRIAARHPDQRIAAFVHGGVIGAAMAMASGAEPFAFHGAANGSISRLVIQGERMVVRG
FNDVAHLS
>gi|56696844|ref|YP_167206.1| enoyl-CoA hydratase [Ruegeria pomeroyi DSS-3]
MTQNEIDTGSELLMCGLADGVATLTLNNPERRNALSGDLPQALGRMLALLDDDPRARVLVLTGAGGAFCA
GGDITSMGAALGDGAQPDADAMTRRLRQAQDDIALRLARLSKPSIAALPGAAAGAGMSLALACDLRVSGH
SGYLLPAFGGIGLSGDFGGSWLLARLIGPARAKEVYFTNRRICADEALALGLVNRVVADADVLGEAQALA
AQIAGFAPMALRYMKENIDRAGDVDLRQALDIEADRMIRTLLSDDHREGARAFAEKRRPRFSGA
>gi|56696845|ref|YP_167207.1| nodulation protein N [Ruegeria pomeroyi DSS-3]
MERTATMTPLEQALRQEQASIGQEIPASNWITVDQAMIDRFAEVTMDDQWIHVDPARAAAETPFGGSIAH
GFLTLSLSSRFVYDVLAPLPGQVMGINYGFDKLRFLAPVPAGARLRGHFRLIEARQRSATELLRKYALTV
EIEGSGTPALAAEWLTLSLFEQALPKAN
>gi|56696846|ref|YP_167208.1| 3-dehydroquinate dehydratase [Ruegeria pomeroyi DSS-3]
MMTSILVLHGPNLNLLGTRQPEVYGTTTLEMVNSACIAHGQSRGLSVACLQSNHEGALVDAIHAAKGVHR
GIVLNAGAYTHTSIALRDAISSVELPVVEVHLSNIHAREAFRHVSHIAPVALGQICGFGAQGYLLALDAL
AAHLSPEGAR
>gi|56696847|ref|YP_167209.1| ATP-dependent transcription regulator LuxR [Ruegeria pomeroyi DSS-3]
MRNYLEKLSYVRTLEELWDGHTRQMAEYGFDRLLYGYTNYRTATSLGDPEDFVILTNHDQSYIDGFMQEG
LYFHAPMLHWALEHEGAGSWRMISDMLDSETLTPQERRVYAFNAEHGVTAGYTVSFTSVSARTKGAISLC
ARKGMSQDEVDALWRTHGQDILLMNNVAHLKIMTLPYVAPNRSLTRRQREALQWVGDGKTTQDIAILMGL
TAATVEKHLRLAREALSVETTAQAVLKAALHNQMFIMEA
>gi|56696848|ref|YP_167210.1| elongation factor Ts [Ruegeria pomeroyi DSS-3]
MAITAALVKELRDSTGAGMMDAKKALTETDGDMEAAVDWLRTKGLAKAAKKSGRTAAEGLVAVVVEGGKG
VAVEVNSETDFVAKNSDFQEMVGKIAAAALAADDVDALLAADLGGKSVADTLTAKIATIGENMSVRRLAK
LEGETVVTYVHNAATTGMGKIGVLVAMKGGDEALGKQVAMHIAAVNPAALSEAEMDPVVVEKEKQVQMDI
ARESGKPEAVIEKMIEGRMKKFVAESTLLSQQFVVNPDLTVGAAAAEAGAEITGFVRLEVGEGIVVEKED
FAAEVAKAAQG
>gi|56696849|ref|YP_167211.1| 30S ribosomal protein S2 [Ruegeria pomeroyi DSS-3]
MALPEFSMRQLLEAGVHFGHQTQRWNPRMSPFIYGARNGIHILDLTQTVPMLDQALKAVRDTVAKGGRVL
FVGTKRQASGPIAEAAEKSAQYYMNHRWLGGTLTNWKTVSQSIQRLRMIDEKMEGGAEGLTKKERLGMER
DQAKLQASLGGIREMGGVPDLLFVIDVKKEALAIAEANKLGIPVVAVVDTNCSPDGVDYIIPGNDDAARA
ISLYCDLAARAALDGMTAQLGAAGVDLGELEEAPAEEALAEEAAAEA
>gi|56696850|ref|YP_167212.1| hypothetical protein SPO1977 [Ruegeria pomeroyi DSS-3]
MPNDTVDGGVPAPEPGGPVPAGPPAVQAAPSAPAPAADKPKPAGWRATLSNLSSLIKDFGIVAAIVATPI
AIVVVLIWEGVLRPRLTSEIMTELSRPDDGYRAWHRDNVIGALSGYDQITARKWLEAEGGPVIERLARPP
EAEEIKALFADPEFRKFFQRQVLLSVSDFRDDYVEYLYREYGETNMLKAWLSPVTDQVDAVYTLNLFYQK
TPVQGDDGRQAVNEAGVPLYDTTFKISDQFYATDDQLFHINVRPETKGGFYDIFRQEAAVLTITIGNFTQ
NINVNGYQDDVTCIVRTALNNAPSGFVTVRANIKRSGPLDPNNPVTLDGQVPDGGFDMKIIVTAKKGRKT
C
>gi|56696851|ref|YP_167213.1| hypothetical protein SPO1978 [Ruegeria pomeroyi DSS-3]
MLMHRLLALLLSLLALPALAQEARWQPLAGFDKVWTKQGATFDGPETGRFEYDALRFGREVPLYEYEFFD
MEDLFNRAYRNRAAKGVLVDAATGGARILSPTMAEAWLAVRDDPAVVAVVPMGFARVAGDTRVVGYRRIN
GRDMQSMFFARNLDAILCLNDMARRNAESYDGQVPFLFGLNFKGRATYSYVEGLDMVNLADGASPQRFLE
TFTACSDLLQLGRRVIEPRDYSRLGGRQGRIALDRAASGEIKPTERIVLLYDRFGHMNFVRTRQPTGIYE
LGRLLSSDGFYDSEPCAYPEKAEYRGRSLSCELWAVTIAAFDGAAIAVRQGDKAMFWGDPGRYAPGVLVI
RRKTPPARPQVTTAPSPARAAPALPLAPAPKLQQRLLPVD
>gi|56696852|ref|YP_167214.1| acyltransferase, putative [Ruegeria pomeroyi DSS-3]
MAPLWDSEDDPDPIEIGTIGWLLVLARGVPLALLVFGGLIVLLLVRLVERPLCGLHRPVTPHITQFVCRN
AFRILGIGFESSGELMREHGAVVANHTSWLDIFALNARKRVYFVSKAEVANWPGIGWLARATGTVFIERN
PKQAREQTRIFMERLGVGHKLLFFPEGTSTDGLRVLPFKTTLFAAFFAPELRSTMYVQPVSVVFHAPKGQ
PDRFYGWWGDMEFGPHLLKTLAARRQGRVELIYHAPARVSDFDNRKALAAHCEEAVRHAHSLARLTP
>gi|56696853|ref|YP_167215.1| hypothetical protein SPO1980 [Ruegeria pomeroyi DSS-3]
MPDHGPAFTVKIAETEAELHAAQRLRYDVFVRELGGSGALVDHQAGLERDRFDPFFDHMLCINNRSGQVV
GVYRLLRDEQAQSAGQFYSEDEYDLGVLKRSGRRLLELGRSCVHPDYRGGMAMYHLWNGLADYVEQHGIE
VLFGVASFHGTDVEALAQPLSMLYHNHLAPEDLRVRTQPAHYVDMNRITPEALDRRRAMLEVPSLIKAYL
RLGGFVGDGAYIDHAFNTTDVCLILDTARMNERQRRIYGGG
>gi|56696854|ref|YP_167216.1| hypothetical protein SPO1981 [Ruegeria pomeroyi DSS-3]
MICVTERLTAGQARAFVLQTLRKPRYLRATTIDPPETHA
>gi|56696856|ref|YP_167217.1| hypothetical protein SPO1982 [Ruegeria pomeroyi DSS-3]
MGHAIPPLSDLTSSRQGPDMTDLNAILAPGMFVRHPDYPDWGTGQVQSSIAGKITVNFPDQGKVVIDGTR
IALLVVFDP
>gi|56696855|ref|YP_167218.1| hypothetical protein SPO1983 [Ruegeria pomeroyi DSS-3]
MAQSGVNLASLIGSRICHDLISPIGAITNGLELLDMTGSVEGPEMELIADSVGNAGARIRFFRIAYGASS
DQMLGRAELVGLLDDLNRSARAKADWAPTEPVTRAEVRMAFLALQCCETALPFGGSVRMDQQGDRWIVTA
EAEKLSVDPALWEGLSNPAALKQVTPAQVQFALLPAVAEDAGRRVTVETSDRQLVIRF
>gi|56696857|ref|YP_167219.1| gamma-glutamyl phosphate reductase [Ruegeria pomeroyi DSS-3]
MKDIADISATMTELGKRARAAAAQLAFASAEAKRAALIGAADAVWARRGEIIAANARDLEFGRDKGLSPA
MMDRLMLDEARIQGIVDGLRTVADQDDPVGEVLAEWDMPSGIHIQRVRTPLGVIGVIYESRPNVTADAGA
LCLKSGNAVILRGGSESFHSSGAIHACLVAGLRAAGLPEDAIQLVPTRDRAAVSELLTMTDYVDVIVPRG
GKGLVGLVQREARVPVFAHLEGIVHIYIDKAADPEKALRVVMNAKTRRTGICGAAECLLIHKDIADNLGA
DLVRALIEAGVEVRAEGLPGSLAATEADWGKEYLDMIIAAKVVDDVDAAIAHIRQYGSNHTDCVITEDDA
VAARFFERLDSAILMHNASTQFADGGEFGMGAEIGIATGKMHARGPVGAAQLTSFKYLVRGNGTTRA
>gi|56696858|ref|YP_167220.1| gamma-glutamyl kinase [Ruegeria pomeroyi DSS-3]
MATLTTARRLVVKIGSALLVDRNTGDLRADWLHSLAADVAWLKGLGLDVILVSSGSIALGRGVLGLPRTA
LPLEQSQAAAAVGQIRLARAYEEALAPHRITTAQVLVTLEDSEDRRRYLNSRATLETLLGLGAVPIVNEN
DTVATDEIRYGDNDRLAAQIAVTVGADQLILLSDVDGFYTGNPSDDPGATRFDVIDRITPEIVAMAGDAG
SGLSKGGMKTKLMAAQMATAGGCAMAITEGSPLNPLKTLENGANCTWFTATLDPQAARKRWIAAMKPRGD
ITVDAGAARALEGGKSLLPAGVASVTGDFGRGDPVAILGPDGRRLGQGLCRYTGDEARAIRGRQSSDIEA
TLGYPGRAALIHRDDMAL
>gi|56696859|ref|YP_167221.1| GTPase ObgE [Ruegeria pomeroyi DSS-3]
MKFLDLAKVYIRSGSGGNGCVSFRREKFIEYGGPDGGDGGKGGSVWAEAVDGLNTLIDFRYQQHFFAQNG
VPGKGQQRSGKDGEDIVLRVPVGTEILDEDEETVLADLTEVGQRVLLAKGGNGGFGNLHFKSATNQAPRR
ANPGQAGVDRTIWLRLKLIADVGLLGLPNAGKSTFLAATSNARPKIADYPFTTLHPNLGVVGVDNVEFVI
ADIPGLIAGAHEGRGIGDRFLGHVERCAVLLHLVDGTSGDLVEDYHTIIGELEAYGGDLAGKPRVTVLNK
IDTLDDEERAFLVEELETASGGPVMMMSGASREGVTEVLRALRARIDANRLREKPVEESQPWQP
>gi|56696861|ref|YP_167222.1| acetyltransferase [Ruegeria pomeroyi DSS-3]
MKFDTIINQPVIETERFDLRPLRKSDMGLIEHYARDERVARMTTSIPHPLPPGMAEGFVARAMSEERTED
VWAMDATRDGGPELMGLISLERMDRNQSEVGYWVAPVFWNTGIASMAVEALVNANPLGNATMFASVFQDN
PASARVLTHCGFQYLGDAESYSVARDAAVPTWTYSRKL
>gi|56696860|ref|YP_167223.1| amino acid transporter LysE [Ruegeria pomeroyi DSS-3]
MGDRQGLPVPFLVFHRSLTGRPQMAVATTSFLLFAAAQVGTPGPANMALLATGARYGFRAALPFVAGVAL
GKQLVIWPVGFGLMELADRVPLLFQALKYLCVAYICWLAWKIANLRLAPGGGGDGAAPGFGAGLLVHPLN
PKAWAMIVTGFAGFVAPGTAAFQATLTVALGLLACQAVFHPLWTFAGDRIAAVVAGRPGEKYLMWMLAGL
TVASVIFGVFGGGAQK
>gi|56696862|ref|YP_167224.1| 50S ribosomal protein L27 [Ruegeria pomeroyi DSS-3]
MAHKKAGGSSRNGRDSIGRRLGVKKYGGEAVGAGNILVRQRGTKFWPGEGVGMGKDHTIFATVDGAVKFH
KGLKKRTFISVLPVAEAAE
>gi|56696863|ref|YP_167225.1| 50S ribosomal protein L21/unknown domain fusion protein [Ruegeria pomeroyi DSS-3]
MFAVLKTGGKQYKVQAGDVLRVEKLAADAGEKVQFNDVLMLGGDAPVVGAPLVDGAAVQAEVIDQIKGEK
LIHFVKRRRKHSSQRTKGHRQKLTLVRITEILTSGADKTGVKAATGQAAAGAAAPAAAAPAAAGSDDLTK
ITGVGPAAAKKLVEAGIGSFAALAALSDEQIAAIDAVKVKPEWVEQAKELAQG
>gi|56696864|ref|YP_167226.1| hypothetical protein SPO1991 [Ruegeria pomeroyi DSS-3]
MMRRGGVVLCLWLAAPVAAEQPFDDLARAMRLDEVVAILRDEGLGYGATLDAEFLGGSGGAFFTAQVDRI
YAPDRMQAALSGALADHLDTEQAAAATAFFRTETGQAILTLENSARRAFADDGIEEMALERAERAGEDDT
RLRQVAAYVAANDLVGQNVKGAISADFQFYRGLSDGQDLDRDDGAVLASLLEARDETEAETRRWVMGFLY
FAYAPLEDAQMQANIDFSQSAAGQALNAALFDGFDRLYGEISYDLGRAVGFALKASDI
>gi|56696865|ref|YP_167227.1| hypothetical protein SPO1992 [Ruegeria pomeroyi DSS-3]
MTRLFRGALPLVLGSLFLVLALALPLRAADRARIEAFLVTTGFDVALDSIAQASASAPGMLGLEAESFGS
QWTTLTREVFDTGVMRGRALDILEQTLSDTALDHAVGFYASDLGQRLVVAENAAHMADDDLKEEAGEAIV
SELVRHGSTRIESLKRMNRAIDSSGTALRALQEIQLRFLLAASAAGVIELQMETEDLRELLRSNETEMRN
ALQLSALASAAYTYQAFSDHEVDTYTEALEQPLMQEVYELLNAVQYSIMADRFEVLAVRMADLQPVQDL
>gi|56696866|ref|YP_167228.1| HlyD family type I secretion membrane fusion protein [Ruegeria pomeroyi DSS-3]
MADPKSKRRTWTTGRPFAVTVFSLIFLLGCLAVWSTRANISGAVIGSGTIEVSTTMTAVQHPIGGVVSEI
NVRNGDRVRAGDILVQLDSRQFHSDLNVVEGELFEVLANIARLQAIMDNRRQMELTPVLAEAVQTKPEVK
LLVERQQQQLTAHFEAITSGMHLLDEQITQVRAEIAGVEAQLAAKLDEIDLLSLEIENAEQLAERKLITM
SELYKLKKDDVTIRGEIGQNEAKIAELRGKISELNLKRLVVIPDAQEKAEEELRKLRPLRVRFMEMRLSL
LDDLSKLEIRAPVNGKIHESQVQGRRSVITAAKPLMMIVPDDDPYQIGVRIAAADIDQVFIGQEASIKFR
AFNARDLPIILGSVSRISPDVTLDPLTKKYHYEVKVALNAGEEAKLNGRELLPGMPVEAYIATESRTAIN
YVVRPIKRFFDRALRDT
>gi|56696867|ref|YP_167229.1| ABC transporter, ATP-binding/permease protein [Ruegeria pomeroyi DSS-3]
MNSAKALRGSARRAVRKGGLILSAAFLLSFAVNLLRLGGPFFMILVYDRVLTSRSMETLIALFSLLIVLL
LVLGTLDYARKRLLARFGAQFQEQMEETLLRNSGRNHVFQHNKSKPAVGLDEVDGLRGFFHSGSLIAVFD
FIWTPMFLTVVFFLHPLLGWACLGGVAVIGLLALAKAMFIGGRRERAKDSAGAVNNLRNILIASRETVRG
QDMGVGFRPRWQQAREDARDEAIALKDWTGWFDSMSKVTVMVVRYSVLATGAYLTLNGALTVGVMVAATF
MVTRILGPVDRFFTQIPQMFLARDHWRHLNSILASRAEELEDDYAEQPGALHQLVLDNVSVRSPITNNLI
LRSVSLVADAGEIIEINGLSSQGKTVLLETILGMWSTSSGSVLVEGRHSSRLTDTDARNLFGYAPDNPGF
VAGTIEENISGLDPEATPDKVSLAARRARMHAAISSLPEGYKTRLDPRGNCLSSFERYQLGLARAFYGDP
KLLLIDGLDSDMLVRIPKKLKATFDAFKKSGTTIILTSRDPSGLSNVDRRFQLQDGKLTLMPKAANSKRR
VTEENGAESAAERPDAERSKRPNVSVLRNVNAQDPGKTGTR
>gi|56696868|ref|YP_167230.1| hypothetical protein SPO1996 [Ruegeria pomeroyi DSS-3]
MGLVNGGCPGKKAPVTAMWVSSRRNAAIPPGQNLFRNTSFPRRCNAVRILQPSGHSIILFTQERPSMSQK
DLGFVRRSYFPTMIFQIDVPEPEDLNKKLLASIYAERERDKKGISRSNIPALGGWHSHNDLYKSKEYAEL
VGLIGQATSKMSEDLGYADSHTIRIGTMWSIINPPGCVNRAHVHPGCLWSGVYYIQAPENCGNIEFIEPR
TVHLMNQAKFQPNKKRSRENWTKVRYTPVAGRMIIFPAWLYHAVDPNETKETGDAGNRVIISFNLNQVKK
S
>gi|56696869|ref|YP_167231.1| hypothetical protein SPO1997 [Ruegeria pomeroyi DSS-3]
MLRGAAARSLVMPPRLRHPFCMTHPLRPAAPDHPARRRVHAALHNRFRNAAAALFCLCALPAVAQQRPPP
FDNTAGTVFDIIRADDPTTFVCLDELGRAERQIWDKRVDGEPVVLAYLFQSQYADGTSIEIAINPEFGSD
EMAREQAELYAPALGRLPTALRAGIKRFSVHEGRRGYHAGTGGIVVYAQTTENRLSYDHLEESLFHEAVH
ASWDRDHRLAPEWIAAQQSDGMFLTRYGQKSPEREDLAETALFAFAILHHPDRFPPVDTQVTRHAVPARI
AYVAELLPVDRPLIWQIGPPQGCAAQK
>gi|56696870|ref|YP_167232.1| hypothetical protein SPO1998 [Ruegeria pomeroyi DSS-3]
MSSKPASTIAGWLQLNELTAGQCETLLKLAPRSLPGTGQDRQVPSPDGPALWALAADCLSETLPELASDI
LRTASQTRVDFAPDPRNYPRPFTLHMPVDGQVYVSCPLAGTPWDALTVAHEFGHALQLNCCSGVQLPPVL
RETAAFVAEAVVAGALALRDTPLADPVCRAYARRTLTDLGPIAKRLRAALACPDTPYDDCWNYPPARQIA
QALTQGDRPLRTGIAASVFRGDAQLGALVSLLCSDAE
>gi|56696871|ref|YP_167233.1| hypothetical protein SPO1999 [Ruegeria pomeroyi DSS-3]
MAGLDRLVAFVAFVAFVVFIAFVVFVAFVTFVAFVVFVSLISFVGIGLAVALVAFVAFVSFVSFVAFVAF
VAFVAVVVVVDLVFFVTFVVLVVFVAFVVFVAFVAFVILVGFVAFVVFVAFVGFVVFVAFAAFVFFVELV
VFVVFVILVVFVAFVVFVVFVVFVAFVGFVTFVVFVVFVVFVAFVVFVVLVVFVALVVFVAFVTLVVYAA
FIEFVAFVVFIALVAFVTFVELVVLIAFIAFVVFVVLVVLVRFVAFIIFVVLVVFVVFVSFVTFVVFVAF
VIFVGFVVLVAFVGFVTFVAFVTFVVLVGFVAFVGFVTFVVFVAFVATIVDIGFVTFIALVTVIAGAGFG
LVAFVAFVVLVAFVAFVVFVVLVAFVGLVAFVVLVAFVEFVVFVAFVAFVTLVEFVVFVELVVLVAFVTL
VTLVVFVVQIGFVAFVAFVAFVAFITFVGFVIFVAFVVFVAVDLALVALVTFVALVAFVAFVALVEFVVF
VALVALVALVTFVAFVEFVVFVVFVGFVAFVAFVVFVVFVVLVGFVAFVAFVVLVVFVGFVAFVVLVILV
PLVILVAFVAFVVLVVFLAFYFFVAFIAFVAFVILIVGLGAFVALIALVVLVAFVVLVALVALIVIGIAG
VAFVAFVVLVAFVAFVVFVAFVAAVFVAFVAFVAFVAFVAFVVFVAFVAFVSFVALITFVAGLVAFVAFV
VLVAFVVFVAFVAFVGLVTFVVFVVFVLLVAFVAFVVVVLVTLVAFVAFVVLVTFVALVTLVAFVALVTL
VGFVAFVTFVVLVAFVTLVALVALVAFVPLVAFVAFVAAVLVAFVAFVAFVAFVAFVTFVVLVAFLAFVA
FVAFVGLVAFVVLVALVVFVALVGFVAFVTLVAFVAFVVLVAFVALVAFVTFVAFVAAVGFVLFVAFVAF
VIFVAFVAFVAFVVLVAFVVLVALVAFVGLVAFIALVAIVIVGRKADGGVRTGQGQRLVDQFGQVDGQVC
DVQGSGCDNGGHDGVSGENGSKIEATAMSRMAANEWVLEIHGTEKQFGKSASKAHCCNTIRPAQSRGGSF
GPK
>gi|56696872|ref|YP_167234.1| endoribonuclease L-PSP family protein [Ruegeria pomeroyi DSS-3]
MTDITRHHTGTRMSQIVIHGDTVYLAGQVGTAGASVAQQTQDCLNQIDALLSEAGSDRTRILQTTIWLAD
MADFAEMNAVWDSWVPAGHAPARACGEARLATPDYRVEFIVTAARAD
>gi|56696873|ref|YP_167235.1| oxidoreductase, FAD-binding [Ruegeria pomeroyi DSS-3]
MKTSDVLVIGGGIAGISAAAELAAHMSVCVLEAETVPGYHATGRSAAIFIRNYGNATLRALNAASAPFLA
APDGIGTDSLLSPRGEMLIATEDELDALDAYSAGATGLEALTPDQAVELVPILCRELIAGAIIEWDAQDI
DVDRMLAGYGRLLRARGGQTVTGARVEGMRRKAGVWTVRAGDTDYQAPLVVNAAGAWADGVAGLAGLAPL
GLQPMRRSAALLPAPAGHDIRTWPLFASAAEQWYAKPEAGKLMVSPADEDPVEPHDAWAEDMVLAEGLHR
YEQAVTHQVTRVERTWAGLRTFAPDRSPVVGFDPRAEGLFWLAGQGGYGIQTAPGLSRLAAALVAGERVV
LDTDTVAALCPARFFT
>gi|56696874|ref|YP_167236.1| acetylpolyamine aminohydrolase [Ruegeria pomeroyi DSS-3]
MKAVFDTRQWRHDPQHFMANGAVLPNPEQPRRIEVLRAGAEAAGCVFAAPGDAGLGPIAALHSPEYLTFL
QTIHARWRRIPGAGAEVIPNIHPGARTDGYPKSAVGQAGYHQADTACPIAEGTWEAAYWSAQSAITGADL
IIQGERSAYVLSRPPGHHAFGDLAGGFCFLNNSAIAAERLRAAGLRPAILDIDVHHGNGTQGIFYERDDV
LTVSIHADPARFYPFFWGHAQERGAGRGLGYNLNLPLARGTGDDDYLDTLSVALRQVASFGSRVLVVALG
LDASIDDPFQGLAITQDGFARIGAALAGTRVPVLFVQEGGYLCDSLGDTLTRVLTGFQEAL
>gi|56696875|ref|YP_167237.1| acetyltransferase [Ruegeria pomeroyi DSS-3]
MDLVLRIAQQADAAALNRALQRLSDDLGDRHRARPVDLEQAGWGAMPAFRAVLAEQAGEIQGVALYSPLF
STTQGGAGLYVSDLWSAPQLRGQRIGTRLLAAALADGRQLWGARFLKLCVYDTSARARRFYDHLGFVSAG
GQSNLILDEAGCAALRGEE
>gi|56696876|ref|YP_167238.1| hypothetical protein SPO2004 [Ruegeria pomeroyi DSS-3]
MSRILITCAITGSIHTPSMSPYLPVTADEITQQAVDAADAGAAILHLHARDPETGRPSAEIGHFMGFLPR
IKQSCEAVLNLSTGGSAVMTLDQRLAAPKQAAPEMCSLNMGTMNFALYPAADRISDWKHDWEEPFLRGSD
DLVFKNTPRDMALILGEMGTKRGARFEFEVYDVGHLYMLRHFVDRGLVQGPLFIQFVFGVLGGIGPDPEN
LMHMKTVADKLFGQDYLFSVLAAGRHQIPLVTMAAAMGGHVRVGLEDSLMISRGVLARSNAEQVRKIRRI
VEDLGREVASPGEARAMLGLKGADRTAF
>gi|56696877|ref|YP_167239.1| aminotransferase, class III [Ruegeria pomeroyi DSS-3]
MSHLFYQGRGRKPVLDQARGVYMWDKDGKRYLDGSSGAMVCNIGHSNPNVLAAMQRQMEKSTFGYRLHFE
TEASEKLASKLAALAPGGLDKVFFVSGGSEAVESALKLARQYMNATGQGSRWKVISRQPSYHGSTLGALA
VTGYTPLSAPFEPMLRQMPKIPAPRAYLDGRDPRDPASGHHYANMLASAIEAEGPETVAAFIVEPVGGAS
TGALVPPAGYMERIREICDRYGILMIADEVMTGAGRTGRFLGSDHWNARPDIIVMSKGLGAGYVPLGAMI
ADARLVEPVLDAGGFAHGYTYAGNPLACAAGLAVVEEIEGQALCANADRMGERLLARLRGLMQKHEVIGD
VRGMGLLTAFELMSDRDSKAPLPKGLNAYQRLVDIAYDKGLIVYSRRTRDGIEGDHILVCPPLIVTDDHL
DEIIEGLDAALSQFADEIAGTAG
>gi|56696878|ref|YP_167240.1| spermidine/putrescine ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MSSVTLSNIVKRFGEFTAVHPTNLDIPEGAFVTLLGPSGCGKTTNLRMIAGLLDPTEGEILIGGRRVNDV
PIHRRNLGIVFQNYALFPHKTVAENVAFGLKYRDGPRAAIAGKVQAALDLVQLPDVGNRYPKELSGGQQQ
RIALARAIVIEPDVLLLDEPLSALDANLREDMRVELKRIQHQIGVTTVFVTHDQSEALAMSDKIVVMSAG
RVEQVGTPSEVYNTPASEFVANFLGASNILTADCIRVDGQGAMLEVPLFGRVPVASTKAAGVSQGAAKLV
LRAEKLTLYDTSADTSALVTAPATVETVDYQGQTVRYFVRVAQTQLQAINMIDERPFAEGSTVTVGFRPQ
DCAALQGV
>gi|56696879|ref|YP_167241.1| spermidine/putrescine ABC transporter, periplasmic substrate-binding protein [Ruegeria pomeroyi DSS-3]
MTKKMDNTTRYERLRERYMNGDIDRRGFLGLLGAAGLAYGVQSPFARYAHAAADQVRFDGWGGVVSEAFR
KFAFDPYTAKTGIQVVDGTFGGGDEYLSRVKASQPGEYNIAHLSGVFDYARYHGLGLTSELNEANIPNLG
LVIPKLVDVFRGVTGGKLSCVPYDYGTTGLAYNRKHISDDQMQEMGAKILIDDSLKGKIGGWSDWRTRMW
YAALQTGQDPNGVTDEEAAWDAVRAHRDLALKYWTSGAELMSLLAEEEIYVTEGWSGRIYALQEQGHDIG
YMDPPNGFGWQECLFVIKGSPMEACEELLNFMLAPETSIAVAEGQNYPTALDPTKVDLGDKIPTLPAFDP
TGTLSGLTFADPDYWNGHEAEWSKTFGRVQKGY
>gi|56696880|ref|YP_167242.1| spermidine/putrescine ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MGWHLIRAWSIGVYIFMFLPVAVVVLLSFNASQFGSFPMTGFSLRWFLELWNNEAILRAFRTSLVLGLMT
ALISTTLGVLASLALVRYKVPGANLISTLLIAPILVPEVVLAVALLLFLNFLGVNKSFGLLLFGHVIFTL
PFVILVVQARLVSIKRDIEEAAMSLGATPIQTFFQITLPLMMPAVLAGGLFAFTISFDDITGTLFWKPGG
VETVPTQIFAMLRNSISPEINALGTVMIVMTVGLPLLGAAIARQLARKRGT
>gi|56696881|ref|YP_167243.1| spermidine/putrescine ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MIGGFAQCRQVFTRGNPMSIETREARQPWILLSPALTAIMLLLFVPLSFIVVYSFWLRTATGADQVGFYL
DNWAEALSDRFYRDILFSTLRIAAITTAVCALMGYPAAYFIARSKGNKAILLLLLMLPFWISYIIRTMSW
INILGVSGAFNSVLISLGVISEPIQMLYNETTVILGLVHFLLPFMVLNIYVSLDGIDTNLEAAANSLGAT
KWQSFLQVTLPLSLPGLAAGGLLCFVLGAGTYITPLVLGGPRDAMFANLVFEAIITQLNWPLGSALSLML
LAVLGALVMIYNRYLGMAQLMKGLG
>gi|56696882|ref|YP_167244.1| LysR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MSDPSHRYHPDRIARELDWNLLRTFVVLAESHSVTDAANRLGLRQPSVSAALKKLEDRIGRKLLDRSPGH
FALTDAGRLLYREAVEINGSVLRLSTLMRELTDEVQGNVRITVASHVVSPLLDNALARFHAKHPKATLSI
EVFSSADAIAEVTAKRASFAVCLVKDHNPKLEYRRLFREFFGLFCGPPHPLFGKPDLSLRDLAGHSSVSF
ETDRLQDVLKPVTVMRAQAELGQKITGISSHLEEVRRMIVAGLGIGPLPLHVAARDVRDGLLWQVPPYEG
LPAIDVHVVWNQAAVKNRAEDLLLQEILNAIDTTPMEERTYR
>gi|56696883|ref|YP_167245.1| hypothetical protein SPO2013 [Ruegeria pomeroyi DSS-3]
MQAMARPPSLLLLILLQVIVSAASLVVEIVAGRMLAPYVGMSLYTWTSVIAVVLAGFSLGHWVGGLLAER
PAERALRLTGWTLVAAALTTAAAALLLRSLSGPVLELVEHPVWGIAVLTLAVFFLPSCFAGVPAPVLAAL
SVQGGQGAGRALGAMFAAGAIGAIAGTLLAGFVFISWLGSSLTLMTVTAVYALSALLCFRLAGGRWLAPL
LALGLILTLAVAALAAPDPCTRESRYYCIRVIELGPQEAPERLMVIDHLGHGISARDAPLTMYTDHAAML
DALARIRAPRPDFSAFFIGGGSYSIPRAFALRGTGPRVVAEIDPEVTRIAAEQFWFDPASAEILHEDARR
ALLTRPERRYDVILGDAFTDVAVPAHLVTHEFFDLVRDRLTPEGSYLMNVIDYRDRLQALAALVHTLRAV
FPMVEVWTSTTPPPPGERAVFVLVAGNSPTSHSRFVTRAPNPTEYGALDPDWVARLAATGTLLSDDFAPI
DRLIGRPD
>gi|56696884|ref|YP_167246.1| cysteine desulfurase SufS [Ruegeria pomeroyi DSS-3]
MYDVDRIRAEFPILSRQVNGKPLTYLDNGASAQKPQAVIDAVTRGYAEEYANVHRGLHFLSNLATEKYEA
VRGIVARFLNAGSEDEIVLNSGTTEGINMVAYGWAMPQMQAGDEIVLSTMEHHANIVPWHFLRERQGVVL
KWVDPEPDGSLDPQAVLDAIGPRTKLVAITHCSNVLGTVVDVKSICAGARAKGVPVLVDGSQGAVHMPVD
VQDLGCDFYAITGHKLYGPSGSGAIYARAERLAEMRPFMGGGDMIKEVTKDTVIYNDPPMKFEAGTPGIV
QTIGMGVALDYMMALGMENIAAHEAGLRDYAASRFAGLNWLNVQGHAPGKAAIFSFTLQGAAHAHDISTI
LDKKGVAVRAGHHCAGPLMDHLGVTATCRASFGLYNTRAEVDTLIEALELAHELFA
>gi|56696885|ref|YP_167247.1| hypothetical protein SPO2015 [Ruegeria pomeroyi DSS-3]
MTSAELRSLAALTVTDPASAARLILTRNPGREALWLALALSVALTSLLHGLSNMAFGSVAMPGIPQSVVG
YGALMGGGLILTIAAIHRIGRLLGGQGSFWDLMAVMVWIQLVLVVVQAATLLLALTVPLLSALLALAANL
VALYVTLHFIDQAHRLNSLMRAAGVLILSVLAIALGVLVLLSLVGGPIPGATPYV
>gi|56696886|ref|YP_167248.1| hypothetical protein SPO2016 [Ruegeria pomeroyi DSS-3]
MPVTSDIAASYRGPARVMRHLLDMGQREDRALAFVMAFCVIAFVAQLPALARRAHLEQADLNMLMGGALL
GSVFLLPLLFYAIALLSHWVARMLGGQGSAYGARLALFWSLLASTPLVLLNGLVAGFIGPGPALSAVGLI
WVAVFAWFWLTNLREAQRPAP
>gi|56696887|ref|YP_167249.1| FeS assembly protein SufD [Ruegeria pomeroyi DSS-3]
MGVPAQKQTATEALLATLTLPTAGCTQSAREAALARLREMGVPGRRDEYWKYTRPDSLISPEAPRAATFH
TDEPMMFDAIDRLKIVFVDGVFDAEASDALELDGVRIERIEDICCKDIHWAKDLYGVLEARGQTPVPRPL
AALNTAFAADGIAIHVTGKPSKPISLIYKHASESSDALLHHVIRVESGAEVTILENGPAASRFNKCMEID
IADGGTLHHVRAQGRDHERRAVTHMFTRLGAASVYKSFTLTVNGVLTRNEQVVELTGDEGVAHVAGACVG
DGDFLHDDTVFVTHDAVNCESRQVFKKVLRNGATGVFQGKILVQPGAQKTDGYQISQSLLLDDDSQFLAK
PELEIYADDVACSHGSTSGAIDDTALFYLRSRGVPEKAATDLLTLAFLAEAVEEIEDEALVADIVSRLEG
WLARRA
>gi|56696888|ref|YP_167250.1| FeS assembly ATPase SufC [Ruegeria pomeroyi DSS-3]
MLEIKNLHVKLEEEDKQILKGVDLTVEAGKVHAIMGPNGSGKSTLSYVLSGRDGYEVTEGGATLSGADLL
EMEPEERAAAGLFLAFQYPVEIPGVGNMTFLRTAVNAQRKARGEEELSAADFLKEVRAKAKALKIDADML
KRPVNVGFSGGEKKRNEILQMAMLEPKMCILDETDSGLDVDAMKLVAEGVNALRDAGRGFLVITHYQRLL
DHIKPDVVHIMADGRIVKSGGPELALEVENNGYADILAEVN
>gi|56696889|ref|YP_167251.1| exoV domain-containing protein [Ruegeria pomeroyi DSS-3]
MRALPTDPIRLYWWKGVPNFGDALSALVVAHVSGRAVRHAGPKGCEMLAIGSLIQVMRRNYGEPAPDGRR
PVIWGAGLLHPVGSTGFLDNVDVALLRGPLSADLLGLRMRGFGDPGLLVSDLLGDLPARNDRIALVPHHS
MLEDPALAALLASEPALKLIDVAGDALATCREIASCRHVISASLHGLIVADACGVPSTWLMPGGQQHLKY
YDYAASVGRPLDMPLTLAEVPAHLRGLKDDDRLDWAEGIARARSDLLTAFPAHMRAQTPASAAVAEPK
>gi|56696890|ref|YP_167252.1| FkbM family methyltransferase [Ruegeria pomeroyi DSS-3]
MSADGSEQTNQPSRAAQMLANRHGFLAAAIAPARPLRIADVGANPINVPDYDGLLRLGGCEVWGFEPDQA
SYDALMADPRPGTHYLQQAVGPTGPGRFHPHPQSGLGSLYPIRKRSVTFLGKPGWHREGIEPIEMELVAL
DDLDEGALPRPDLLKIDIQGGELDVIRTGRDKLSEAVCVIPEVRFYRIYEDEPLFGPLDVELHDQGFRFH
TFQFTKSMQIMNSQRARLAGKAFRNQMMDGDAIYIRDPETVEDWRDEQLRQLAVASACVFASFDLTVFCL
DELVRRGLAAPEVPGQFVDTLPTWMLKGS
>gi|56696891|ref|YP_167253.1| hypothetical protein SPO2021 [Ruegeria pomeroyi DSS-3]
MIVTTTPNVEGRRITAYKGIVVGEAIMGANVVRDVFASITDIVGGRSGAYESKLQDARETALSELEGRAV
ALGANAVVGVDLDYEVVGQSMLMVSASGTAVVLD
>gi|56696892|ref|YP_167254.1| hypothetical protein SPO2022 [Ruegeria pomeroyi DSS-3]
MDDQSGDQMRPELTMPPAEAEALRMAYEEAEVILEYGSGGSTVVAAELPGKHVTSVESDRAWARMMKAWL
AANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRSYPDYPLAVWRTEGFRHPDVVLVDGRFRVGCALATA
FSITRPVTLLFDDYSQRRWQHQVEEFLGAPLMIGRLAAFQVEPQPIPPGSLMQLIRTMTSP
>gi|56696893|ref|YP_167255.1| cysteine desulfurase activator complex subunit SufB [Ruegeria pomeroyi DSS-3]
MAALDQTQVKEGVDQETVDAVREAGTYKYGWETEIEMEYAPKGVNPDIVRLISDKNEEPEWMTEWRLAAF
ERWTGMSEPKWAMVSYPEIDFQDQYYYARPKSMSEKPKSLDDVDPKLLATYEKLGIPLKEQMILAGVEGA
ENAPAEGRKVAVDAVFDSVSVGTTFQAELKKAGVIFCSISEAIREHPELVKKYLGSVVPVSDNFYATLNS
AVFSDGSFVYVPPGVRCPMELSTYFRINAENTGQFERTLIIADKGSYVSYLEGCTAPKRDVAQLHAAVVE
IIIEEDAEVKYSTVQNWYPGDENGKGGIYNFVTKRADCRGDRSKVMWTQVETGSAVTWKYPSCILRGDDS
QGEFYSIAIANNMQQADTGTKMIHLGKNTKSRIVSKGISAGRAQNTYRGLVSMHPKAKNSRNYTQCDSLL
IGDKCGAHTVPYIEVKNNSSRCEHEATTSKVDEDQLFYCRSRGMDEEEAVALVVNGFCKDVLQALPMEFA
MEAQQLVAISLEGSVG
>gi|56696894|ref|YP_167256.1| iron-sulfur cluster assembly transcription factor IscR, putative [Ruegeria pomeroyi DSS-3]
MKLSTKGRYAMVALTDIALQPADKLVTLGDISERQDISLPYLEQLFVKLRRADLVASVRGPGGGYRLARP
ASDIRVVEILAAVDETVNAMHKGAGASGASSGSRAQSLTNRLWEGLSAHVYVFLHQTRLSDVVKNDLAPC
PAVPNLFSIVDD
>gi|56696895|ref|YP_167257.1| hypothetical protein SPO2026 [Ruegeria pomeroyi DSS-3]
MPEVIFPGPEGRLEGRYHPQKEKDAPIAIVLHPHPQFGGTMNNKVVYNLHYAFYNLGFTVLRFNFRGVGR
SQGEYDQGIGELSDAASALDYLQSMNNNSKHCWVAGFSFGAWIGMQLLMRRPEITGFISVAPPANMYDFS
FLAPCPSSGLIINGTSDRVAPPADTRSLVNKLHEQKGITITHTEVEGADHFFQNQHMDTMITSVTDYVKR
RLTETSR
>gi|56696896|ref|YP_167258.1| hypothetical protein SPO2027 [Ruegeria pomeroyi DSS-3]
MSGTIETLAAKLAEDTLDAMDQTGNERLYMEIGSQLAASSQSLEEAFLTEVRVRLAERGARQVLARRLAE
LKGKAKDSE
>gi|56696897|ref|YP_167259.1| HD domain-containing protein [Ruegeria pomeroyi DSS-3]
MSARLDAQIAFLKQADRLKSVERANVLLDLSRPENSAEHSWHLALWALVLSPFAAPDVDVDRAIRMLLLH
DLVEIETGDHPIHEVTDWQAVERAERAAARKLFGLLPPDQAADFHTLWTEFDADETADARYAKMLDRCQP
MFQVLCADTPRPDHVEVVRENLSSGRAAYLAEAFPEAHAHARALLERHPPVTGGFGDRLEFLAEADRLKT
VLRASRLMDDSRFENSAEHSWHIMLYAWVLGEYAAAPVDIDRVLRMLLLHDLVEIDAGDNPIHGNVDHAA
QEALEAAAAERLFGLLPPDQGAGLRAIWQEFETAQSADALFGKAVDRVQTPIANLENGGGSWVTYDVSLQ
QLVARVGTPVSRGAPGLWDWLFPQLSDCFTRLGLRL
>gi|56696898|ref|YP_167260.1| glutamine amidotransferase class-II [Ruegeria pomeroyi DSS-3]
MCRWAAYHGTPIFLEDVISRPGHSLIAQSAHAEECKTATNGDGFGVAWYDARPEPGLYRDVYPAWSDPNL
RAVAHHVRSGLFLSHVRASTGSCISRNNCHPFAARRWCFMHNGQVGGFEAFRKQADMAIADEFYTYRKGS
TDSEVLFLLALSEGLEHDPHGALARAIARLEGLSRAHGTTPHMRLSAAFSDGQTLYAARYSSDHIAPSVY
YRYSHARQGWAVVSEPLETDEGDWTELRPGRMLTIGAEGAAERDFAPADLGRAA
>gi|56696899|ref|YP_167261.1| SMR family multidrug efflux pump [Ruegeria pomeroyi DSS-3]
MPLHYIYLILAVAAETVGTTALQASQQFTRLVPSLIVVGGYGIAFFLLSLTLRHMPVGIVYAIWSGLGIV
FIAFIGLVVFGQRLDLPAILGIAMILAGILVIHLFSGASPH
>gi|56696900|ref|YP_167262.1| GTP-binding protein TypA [Ruegeria pomeroyi DSS-3]
MDLRNIAIIAHVDHGKTTLVDELLKQSGAFRENQAVAERAMDSNDLERERGITILAKATSVEWRGTRVNI
VDTPGHADFGGEVERILSMVDGVVLLVDAAEGPMPQTKFVTSKALALGLRPIVVLNKVDKPDAEPDRALD
ECFDLFANLGANDEQLDFPHLYASGRSGWADTDLDGPRKDLTALFELVVRHVPAPAQIARKDEPFRMLAT
TLGSDPFIGRILTGRVESGTLKAGETLKALSRDGTQIESFRASKILAFRGLGQQPIDVAEAGDIVTIAGM
SKATVADSLVNPQVSEALPAQPIDPPTISVTFGINDSPLAGRDGKKVQSRVIRDRLMKEAESNVAIRVTD
TPGGEAFEVAGRGELQMGVLIENMRREGFELSISRPQVLFREEDGQRLEPVEEVTIDVDDEYTGAVIEKV
TGPRRGELVEMKPAGAGKTRIIAHVPSRGLIGYHGEFLTDTRGTGVLNRVFHGWTPHKGAIPGRRAGVLI
SMENGQSVAYALWNLEERGRMFIGPQTDVYEGMIIGEHSRDNDLEVNPLKGKKLTNVRASGTDDAVRLTP
HIQFSLEEAIAYIDDDELVEVTPNTIRLRKRYLDPHERKRMARAAS
>gi|56696901|ref|YP_167263.1| hypothetical protein SPO2032 [Ruegeria pomeroyi DSS-3]
MGALWIAHVTVTDAEAYGKYAELAGPAIAKHGGTFIARGGRFVQLEGKERPRNVVARFPSVEAAVECYNS
PEYQAALDHARGASERELMVVETSE
>gi|56696902|ref|YP_167264.1| alanyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
MPSLNDIRSTFLNYFAKQGHTIVPSSPLVPRNDPTLMFTNSGMVQFKNCFTGVDKRDYVRATTAQKCVRA
GGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKSEAIPFAWELITRDFDIPKDRLYTTVYHTDDEAFEIW
KKVGVPESRIIRIATSDNFWQMGPTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRFIEIWNIVFMQNEK
FEDGSMVDLDMQSIDTGMGLERIGALLQGSHDNYDTDLFKALIEASADATSVDPYGDQNVHHRVIADHLR
STSFLIADGVMPSNDGRGYVLRRIMRRAMRHAHLLGAKDPVMHRLVRTLVGQMGAAYPELGRAQALIEET
LLLEETRFKQTLDRGLKLLDDELTALPEEAPLPGEAAFKLYDTYGFPLDLTQDALREKGRKVDTDGFDAA
MAEQKAKARAAWAGSGESTDNAIWFDVLDVAGATDFLGYDTEKAEGQALALVVDGALSDRIAEGGSGWVV
TNQTPFYGESGGQVGDTGVIRRLENRDHVALVEDSRKFADGKVYAHKVTMERGALAKGDAVELEVDHARR
SAIRANHSATHLLHEALREALGDHVAQRGSLNAADRLRFDFSHAKALTEAELAQVGAEVNRFIRQNSRVE
TRIMTPDDARAIGAQALFGEKYGDEVRVVSMGRAETGKGADGKTWSIELCGGTHVAQTGDIGMFVLLGDS
ASSAGVRRIEALTGQAAFDHLSQEGARLSQVTAMLKAQPAEVAERVRALMDERKALQNEVAQLRRDLAMA
GGAGQGGGAETHEVGGVPFLAQVLSGVSGKDLPALIDEHKSRMGSGAVLLIADAGGKAAVAAGVTEDLTA
RVSAVDLVKAAVAALGGKGGGGRPDMAQGGGQDAGKADAAIKAAEQVLGG
>gi|56696903|ref|YP_167265.1| recombinase A [Ruegeria pomeroyi DSS-3]
MSSKQSADKQKALDSALAQIERQFGKGSIMRLGGENAIQEIEASSTGSLGLDIALGIGGLPMGRIVEIYG
PESSGKTTLTLHCIAEQQKRGGVCAFVDAEHALDPQYARKLGVDLDELLISQPDTGEQALEITDTLVRSG
AVNMVVVDSVAALTPKSELEGDMGDSSVGVHARLMSQAMRKLTGSISRSKCMVIFINQIRMKIGVMFGSP
ETTTGGNALKFYSSVRLDIRRIGAIKDRDEVVGNATRVKVVKNKVAPPFKQVEFDIMYGEGISKTGELLD
LGVKAGVVDKSGSWFSYGDERIGQGRENAKTFLRENQSIALAIEDKIRAAHGLEFDMSDDGEDILEA
>gi|56696904|ref|YP_167266.1| hypothetical protein SPO2035 [Ruegeria pomeroyi DSS-3]
MLVFFKERLVLLSVPKTGTTAYQTALRARADIVVSDPPELKHAPIYRYDRFFRPIFEKMFGVEMEIMAVV
REPVDWLGSWYRYRRRPFMQGKPNATHGLSFDDFVTAYMQGKRPGFANVGSQARFLTPRPNGCTVSHLFK
YENQPGIRAFLQDRLQTEIAPPRENVSPDLPLDLSPEIAERLRRKCAEEFDLHASAT
>gi|56696905|ref|YP_167267.1| sensory box sensor histidine kianse/response regulator [Ruegeria pomeroyi DSS-3]
MTEFTASIPSVPTTRRSTRARVVAMLLLALAAFAAAALWDLPGFVQKALIAAGGSSVLVTGWLLFQGRSA
IGVETQMRRLLAGFIEKDATPSFVTDEEGAIQARNAAASIRFSGTSDETLAATLRSIFGNPSAVLYRLQC
RARIEGNAREDVVTRRGHIRLSVHVLGEVGFLWRVEDITDRTAASSRADSLPLPMLTIGRSGAVLFMNEA
ARGFIGSRIKSLDRLFLQLPYRAGEINHVSTGEGSAPAIVVEISNSPGRQELFLIPVKGEMGPGKAPDFA
TLPVAMMRLTATGKVLEVNRLAQDLLGGPIEPDTTLDQLMLGLGRPIPDWLRQTAEEAGAPRSEFLRLSG
RDSEMFVQVTLSPINEAGQSGLIAVLNDATELKTLEAQFVQSQKMQAVGQLAGGVAHDFNNLLTAISGHC
DLLLLRHDQGDPDYGDLVQINQNANRAAALVSQLLAFSRKQTLRPEVLDLRDTLADLIHLLNRLVGEKVT
LTLSHDPVLKSVRADKRQLEQVLMNLVVNARDAMPQGGEIRIETEVMTLDEPLERDRATLPIGEYVTVKV
RDEGTGIEPDKLQKIFEPFYTTKRTGEGTGLGLSTVYGIVKQTGGFIFVDSVLGKGSEFTLYLPAYQAAA
GEERPVPARAAKPVATHGAGVVLLVEDEAPVRAFASRALRLRGYTVIEADSAEEALRLLEDPELSVDVFV
TDVVMPGLDGPTWVRKALQERPDVRVVFVSGYSEGAFGETDSALPNSVFLPKPFSLTQLTETVHQQLH
>gi|56696906|ref|YP_167268.1| NOL1/NOP2/sun family protein [Ruegeria pomeroyi DSS-3]
MTPAARLQSAIEVLDEILAGKPAEQALTGWARRSRFAGSKDRAALRDHVFDALRARRSFAARGGAETGRG
LILGLCRAQGLAVADLFTGIGHAPAPLTPEEQAGGRDPAPGAEAADIPDWLWPRFEASLGARAEAAGQVM
QSRAPVHLRVNTARTDRASAIAALAGEGIVAQPHPACDTALEVTEGARGIARSAAYLDGLVELQDAASQA
IVAALPLAPGMRVLDYCAGGGGKTLALAAVPGIEVFAHDAAPQRMRDLPARAARAGAQVRLLDTAEAARM
APFDLVLADAPCSGSGSWRRAPAGKWELSEEKFAALLAVQREILHCAAALTAPGGVLAYATCSMLSEEND
GAVQAFLDTGGWKLDDCHRWDVLSGTDGFFLALLTRTHSEF
>gi|56696907|ref|YP_167269.1| metallo-beta-lactamase family protein [Ruegeria pomeroyi DSS-3]
MAQVDSFQSGPWRVDCLVDGGMTFGTDVFANVAPARQAELLGAAGLSAAVTEFNAYLMRHDDGRIWLVDT
GCGSICGPEGGQLPARLAQVGLAPGDISRVILTHLHADHCGGLLGQAAALFDDAEILLHPDEVAHWRGTE
APGAQVLNTCADRLSLVRGDDDLGADVRVWALPGHTPGHFGLRIGQDLVLAGDILHSEALQLPDPRHATQ
FDVDPALALASRRAALDEIAGRNLVWSGSHLIGAKFARLRRAGDGFAKLDI
>gi|56696908|ref|YP_167270.1| inosine-5'-monophosphate dehydrogenase [Ruegeria pomeroyi DSS-3]
MQIREALTFDDVLLVPAASSVLPSTADTRTRVTREIKLNIPLLSSAMDTVTEARMAIAMAQAGGMGVIHK
NLSVDEQAREVRRVKRFESGIVYNPVTLRPDQTIADAKALVERYNFTGFPVTDTRGHIVGIVTNRDMRFA
TSDDMPVSAVMTTNDLAMLAEPADLDEAKSLMRARRIEKLLVHDGQGRLTGLLTLKDTEQAVLNPTACKD
HLGRLRVAAASSVGDSGFARSEALIDAGVDIVVVDTAHGHSAGVIDAVRRIKQQSNMVQVIAGNVATAEA
TKALIDAGADAIKVGIGPGSICTTRMVAGVGVPQLTAIMDCAQAAGDVPVIADGGIKFSGDFAKAIAAGA
SCAMVGSMIAGTDESPGEVILYQGRSFKSYRGMGSLGAMARGSADRYFQKDAASDKLVPEGIEGQVPYKG
SASAVIHQLVGGLRAAMGYTGCATVGEMRQNCQFVKITGAGLKESHVHDVQITRESPNYRVG
>gi|56696909|ref|YP_167271.1| CaiB/BaiF family protein [Ruegeria pomeroyi DSS-3]
MPGPLSGTLVLDLTHVLAGPFASMTLADLGARVIKVERPGQGDDTRAFPPFKGGKSAYFATINHGKESIA
LDLKAPEDRAIFERLLARADILLENYRPGVMERLGYGWEALHARFPKLIYGAVSGFGHTGPEAQRPAYDM
VVQARGGVMSITGERDREPVRVGASIGDIVAGMYLVQGVMAALLQVERGGTGQKVDVAMLDSQLALLEHA
IAITSVTGEPPRPSGARHPSITPFETFHAEDGLFVIAAGNDGLFARLCDALELPLAEDPRFATNPARCQN
ARLLKRLIEAVTLDRPKAHWIETLTRAGVPTGPIQNVAEVLQDPQIRARNMVVDVLGPDGAPAYTAAGNP
IKMSDLPDPTTRAPAPDLDADRAAILDWLDEGAAD
>gi|56696910|ref|YP_167272.1| iron-sulfur cluster-binding protein [Ruegeria pomeroyi DSS-3]
MSSDPLVLFTPSGKRGHFPVGTPILTAARQLGVDLDSVCGGRGICSKCQITPSYGEFPKHGVTVRDGALS
EWNAVEQRYKDKRGLIDGRRLGCQATVQGDVVIDVPPESQVHRQVVRKRAEARKITMNPSTRLFYVEVEE
PDMHKPTGDMERLIAALAEQWELTGVQTDLHILHQLQPALRKGGWKVTVAVHLGDASHPPKIMHIWPGYY
DGTVYGLAVDLGSTTIAAHLCDLHSGEVVASSGIMNPQIRFGEDLMSRVSYSMMNKGGDLEMTRAVREGM
NALFTQIATEAGIDKALIVDAVFVCNPVMHHLFLGIDPFELGQAPFALATSDSLSLRAWELELNIHPAAR
VYILPCIAGHVGADAAAVALSEAPDKSEDLVLVVDVGTNAEILLGNKNKVLACSSPTGPAFEGAQISSGQ
RAAPGAIERVEIDPVTKEPRFRVIGSEIWSDQEGFGEAIATTGITGICGSGIIEVVAEMRMAGILDASGL
IGSAEQTGSPRCIQDGRTNAYLLWDGSADGGPTITVTNPDVRAIQMAKAALYSGARLLMDKLNVDKVDRV
VLAGAFGAHISAKHAMVLGMIPDCPLDKVTSAGNAAGTGARIALLNTDARTEIEATVRAIEKVETAVERR
FQEHFVNASAIPNSVEPFPELAKVLTLPDVSFNTGGGDDGSGRRRRRRA
>gi|56696911|ref|YP_167273.1| UbiE/COQ5 family methlytransferase [Ruegeria pomeroyi DSS-3]
MTETNHDQAEYWGKSASGMKWLTFEEQIAASFAPVVDLLLERAALKPGQRVLDIGCGLGDVTLAAAQAVG
PGGHVLGVDISAPFLERAGLRASGMGNVGFALADAQSEPFAPAERDAVLSRFGMMFFSDTVAAFANIARA
LKPGGRMTFAAWGPLAGNPWFYLPHRAATDRLGQMPKVDRNAPGPLAFHDIDRVTGLMAEAGLADIEAQA
VDLNLTPPGGLEGAAALCTRLGPAARVLAHFNGSEADEAAIRDAVSAALEPYVEGGEVLMPATINLFQAR
RAGTA
>gi|56696912|ref|YP_167274.1| putative lipoprotein [Ruegeria pomeroyi DSS-3]
MKSIKFSAILAISGLVAGCAQQPNQVAASYVSPSTYDGRSCANLLQERNEIVGRVNQLTSEQKEAATTDA
VLTGVALVVFWPAAIGLAATKDNATALSAAKGNYDAITAKMTQKGCALPPEPVAPSPVATEEKKKRSWE
>gi|56696913|ref|YP_167275.1| medium-chain-fatty-acid--CoA ligase [Ruegeria pomeroyi DSS-3]
MLGQMMYQPLLISSLIDHAARYHGEAQIWSVSTEGGVEETNWAGIADNARRLGSVLTDAGLAPQSRVATL
AWNNRRHLEIYYGVSGAGFVLHTINPRLFPEQLVYILNHAEDRILFFDATFLPLVEGIRPHLTTVERLVL
MGPRDEAAAARIEGLEFYDEFVATGDAGFDWPDLDERTASSLCYTSGTTGNPKGVLYSHRSTVLHSFGSN
TRDCIGFSARDVVMPVVPMFHVNAWGTPYACAMSGSCMVLPGPDLHGEALVGLIDRYRVTIALGVPTIWQ
GLLATARAKGSTLESLTRTVIGGAACPPSMIAEFRDRYGVDTVHAWGMSEMSPLGTTNQPLAKHGALPIE
AQHKLRENQGRPPYGVELKIVDDDGNTLPNDGQTQGDLMVRGHWVLDSYFQLQDQPILSDGWFATGDVAT
LDRDGYMTIRDRSKDIIKSGGEWISSVELENIAVAHPKLATAAVIGVPHPKWDERPLLVAVKAEGETPDE
AELLAFFDGKIAKWQVPDRVVFVEALPLNATGKVLKRTLREQFRDVLTG
>gi|56696914|ref|YP_167276.1| glucose-6-phosphate isomerase [Ruegeria pomeroyi DSS-3]
MFQDLHALHTRTSGRRILDLFAADLRRAERFSADLGEMRLDYSKTQIDDAIRAGLIALCDRAQLADKREA
MFAGAPINETEGRAVLHTALRNLDGGPVHVDGAEVMADVRLTLARMRRFAEALRSGALPGAGGAITDVVN
IGIGGSDLGPAMAVLALAPYHDGPRCHFVSNVDGAHIADTLRGLDPARTLVIVASKTFTTIETMTNARTA
RDWMQRGGGDPERQFAAVSTATDRTAAFGIPGDRVFGFADWVGGRYSLWGPIGLSLMIAIGPDDFDAFLR
GAQEMDRHFQSAPWEKNLPVMLALTGIWHHQICGHPSRAVLPYDQRLARLPAYLQQLEMESNGKSVAMDG
TALDQAAGPIVWGEPGTNGQHAFYQLIHQGKQVVPCEFMVAARGHEPDLAHHHRLLIANCLAQSEALMRG
RPLDEARAIAAARGVAGDELERQARHRVFAGNRPSTTLIYPRLTPAMLGRIIALYEHRVFVEGVILGINS
FDQWGVELGKELATSLGPVVDGTESAAAKDGSTAALVDYVLAHRDTDLT
>gi|56696915|ref|YP_167277.1| 6-phosphogluconolactonase [Ruegeria pomeroyi DSS-3]
MNIQDYPDRDMLAIDLANHLAGELEATLFTHDSATLAVAGGTTPGPVFDVLCAADLDWHRVMVLPTDERC
VPQDHSRANARLIAERLLVNRAASARYLPLYLPGAEPEDCLAEVEALLTPALPLSVLVLGMGEDMHTASL
FAGMPGLAAALDADAPALAVARPETQPENRITLTAPVLNGALSKHLIIYGAAKRKALERAMSMHPEEAPI
AAVLDGITVHWAE
>gi|56696916|ref|YP_167278.1| glucose-6-phosphate 1-dehydrogenase [Ruegeria pomeroyi DSS-3]
MVSRIIPVEPFDLVVFGGTGDLARSKILPALFRRSVAGQVPEGGRIIGVARQDMGVEAYHALIAQSLREL
LPDLAQVPGALDRFLKQLDYVALDATQPEGWEQLASMLGQGVRAFYFSVGPGLFGALAERLRQHGLVSDD
TRIVVEKPFGHDLASARALNATLAAQFHERQIYRIDHYLGKETVQNLMAVRFGNMLFEPLWNSQYVDHIQ
ITVAEAVGVGGRADYYDRAGAMRDMMQNHLMQLLCLIAMEPPAKFDPDAVRDEKLKVIRALDAVKPHHIV
RGQYAVPVGGVGQGYRDEVGDPRSITESYIALRAHISNWRWAGTPFYLRTGKRLVARSSVINVMFKDAPH
SIFGEEAGRHANVLSIRLQPNEGITLKVTIKEPGPGGMRLVDVPLDMSFAKALGPENQSPPDAYERLIMD
VIRGNQTLFMRGDEVEAAWAWTDPIIAGWQARGDVPKPYDCGSTGPGDAELLMRRDGRRWQGINP
>gi|56696917|ref|YP_167279.1| radical SAM domain-containing protein [Ruegeria pomeroyi DSS-3]
MTSRGITSLSNHLIPLSFPARLRIDQADKQAQAGLMKDHAQHTANIGKFQDSFVTADGQARASVPLSRPE
TLWFNTGTLCNIECANCYILSSPKNDALVYLSADEVSAYLDQIAARGWPVHEIGFTGGEPFMNPQIIAMS
RTALERGFEVLILTNAMRPMMRKTMRLGVAALVRDFGDRLTLRVSVDHHSAACHDAERGAGSFARTLAGM
VWLRDCGARMTVAGRTVWGESEAEARAGYAALYAEYGFAIDAFDPGQTVLFPEMDERVEVPEITTACWDI
LGKSPETVMCASSRMVVKRKGAAHPVVLACTLLPYAPEFELGQTLAEAERPVQLNHPHCAKFCVLGGASC
SA
>gi|56696918|ref|YP_167280.1| Usg, putative [Ruegeria pomeroyi DSS-3]
MERSETELMLKGYGLTTAELFYHMPDHIHVLNSFVWQEYDLAPDHPRLFGFIEFWQREIDGPLHSVRFTH
RKMISPGEWRNVVGEFRLH
>gi|56696919|ref|YP_167281.1| DNA gyrase subunit A [Ruegeria pomeroyi DSS-3]
MGPTVSIESEMRTSYLDYAMSVIVSRAIPDLRDGLKPVHRRILYAMHETGNGHDKPYRKSARPVGDVMGK
YHPHGDSAIYDALVRMAQDFSMSLPLLDGQGNFGSMDGDNPAAMRYTEVRMDKPAAFLLSDIDKETVDFQ
DNYDGKDREPTVLPARFPNMLVNGAGGIAVGMATNIPPHNLGEVVDATLALIDDPDLTSEQLIDYVPGPD
FPTGGVMLGRSGARKAYLEGRGSVIIRAKTRVEELRKDRYAIIVDEIPYQVNKATMIEKIAEAVREKRIE
GVAHVQDESDRNGVRVVVELKRDATPEVVLNQLYRFSPMQTSFGCNMLALNGGRPEQLTLRRFLTCFIDF
REEVVARRTAHDLRKARERSHVLCGLAVAVSNVDEVVATIRSSADAADAREKLMTRRWPAADIAAYLRLI
DDPLSKMNEDGTYNLTEVQARAILDLRLQRLTQLGVKEVTDELEVLAGKIKEYLEILGSRERIMGIIADE
LREVREQFAVPRRTEIVDWSGDMEDEDLIEREDMVVTVTSGGYIKRTPLADFRAQKRGGKGLSGMQTKEE
DVVTTLFVANTHTQLLFFTTDGMVYKLKTWRLPQSGRTGKGKAIVNILPIPTGVSIAAIMPVDVPDEEWD
ALQIVFATSAGDVRRNALSDFTNVKRNGKIAMKLPEDVELVNARICSEEDDVMLITNSGRAIRFPTTDVR
VFKGRDSTGVRGIRLQNGDRVVSMSVIRHFEAEPWERAEFIKRFRTILGAEMEDDAAETDEDAVEGEGVL
TDERYQEMQDAQDLILTITVTGLGKLSSSHDYPVRGRGGQGVKAISAGPRGGTLAASFPVLMDDQIMLAT
SGGQSIRVPVEGISFRSRSAGGVRVFNTSKGEEVVSVARIAEQGDEEGEEE
>gi|56696920|ref|YP_167282.1| hypothetical protein SPO2052 [Ruegeria pomeroyi DSS-3]
MNLYHCAIDLKHEAKALAFAAALDHWMQYLKARGVVRDWRLLRRKLNLAADSCRDFLLEIEFDDMTQLDR
AFRVLGEHDEEVERLYGAVSALIAHSDFGLYRPFPDPERAERMALL
>gi|56696921|ref|YP_167283.1| thermostable carboxypeptidase [Ruegeria pomeroyi DSS-3]
MSAFEQLMAHARETAALDQIAGRLGWDQETMMPRGAAPQRAEESAAIAGVLHARRTDPQVGDWLAAAEAP
DEAGAAQLREIRRSFERTARVPADLARALARTTARAQGVWAEARADEDVAAFLPDLKEVVALRREEGQAL
AQGGDLYDALLEEYEPATSAAQIAETFDTMRPRLVALRSAVLDRPVPQRLEGQFDESAQMKLSRHLARSF
GYDMAHGRVDKAVHPFSSGSGLDVRITTRTNPDDPFNCFYSTIHEVGHAAYEQNIDRAYLLTPLGRGVSM
GVHESQSRIYENQLGRSRAFTGWLFGQMRAAFGDFGIADEDAFYATVNTVHRGYIRTEADEVQYNLHIML
RFDLERALMAGDLAVDDLEAAWNDRFAADFGYQVDKPSNGCLQDVHWSVGLFGYFPTYALGNVYAGCLYQ
ALRQAVPGLEADLAQGDTAAATGWLADQVQRHGGLYAPREVIARASGIEPGPEPLLDYLEAKFGALYDL
>gi|56696922|ref|YP_167284.1| cytochrome c oxidase assembly protein [Ruegeria pomeroyi DSS-3]
MIDRGRGGARGAIRAWLAVLFALVVAMIVVGGLTRLTDSGLSITEWRPVTGAIPPLSEADWQAEFDKYKQ
IDQWRLQNQWMELADFKSIYWWEWGHRQLGRVIGLVWALGFFGFLLARKIPAGWTGRLILPGVLGGVQGA
VGAWMVASGITQGEGMTSVASYRLATHLGLAFVILGLLAWSILQLGRSERDLMQARRTKEARLFGLATGW
LHLAFLQILIGALVAGLDAGRNYVDWPLMAGQVIPPDPLELSPLWRNFFENPGLVQFIHRIVGYLLLAYG
VMVWLRGRRSAHAQTRFAFNAGFAALSLQVVLGIVTVLYAAPWQIAILHQLLAVGVFVLILRARFLCAYP
IATSIRG
>gi|56696923|ref|YP_167285.1| RNA methyltransferase [Ruegeria pomeroyi DSS-3]
MPSDKAQPAIVLVRPQMGENIGAAARAMWNFGLDRMRIVAPRDGWPNSRAVAMSSGAGRLLDEAQLYDDL
PGALGDCTYVFATTARPREMTKPVYSPERAMQLAAEKLAAGEKVAVLFGPERAGLENDDIARANAIITVP
VNPDYASLNLGQCVLLVAYEWMRQTGDVVHLSDAPGPKGEWATGLEIEKLAEHYEQRLDEAGFFFPPEKA
EGMQQNLRNLWSRMRLTRADVQMLHGIMRQMVRWKERG
>gi|56696924|ref|YP_167286.1| thiamine-phosphate pyrophosphorylase, putative [Ruegeria pomeroyi DSS-3]
METPEQPQLYLITPPSIDLDLFPDQLARVLDGAEIACIRLALASRDEDLLSRAADACREVAHARDVALVI
ADHVLLAQRLGLDGVHLSDAARSVRAARKELGADAIVGSFCGTSRHDGMSAGEAGADYVAFGPIGAHGLD
DGSVAERDLFEWWSAVIEVPVVAEGALTADLVRSFAPITDFFGVGDEIWSAEDPLAALKGLISAMT
>gi|56696925|ref|YP_167287.1| hypothetical protein SPO2057 [Ruegeria pomeroyi DSS-3]
MRQRSGTRMRNMGLAFLAVLFRLALVALLSSPLTGVAGAHEVTPTVADLRVENETVILDLRLNVEAFLAG
IDLDGLGDTDESDGSDSYDRLRALGAAELEPKVRDFAVAWKEQLNLSAGGVALELSYEGVRIPVVGNPDL
PRASHLLLTAYLPPGAASLTLGCPRGAGALVLRQQGVDDPYTGYLQGGESSPPIPLAGGAALGPLETFQA
YIPVGFTHILPKGLDHILFVLGLFFLSPRLRPLFWQISAFTLAHTLTLALGATGTVRVDPAIVEPLIAAS
ITFVALENILVRRLHAWRPVLVFGFGLLHGLGFAGVLEEFGLPAGQFLPALLGFNIGVELGQLAVIAAAF
LSVGLWFRNRRWYRGRIAIPASMLIAMIGAYWVVERTLLT
>gi|56696926|ref|YP_167288.1| hypothetical protein SPO2058 [Ruegeria pomeroyi DSS-3]
MFSAAPGLSHEFWIEPNEYQVETGAELVADLRVGERFEGASQVFFPDRAPRSEIRVGDEIRPYTGRMGDI
PAIRLVADTPGLWVLVHETSPSTVKYKEWQKFADFAAHKDIPDIEAWHIARGLPRQDFFETYTRHVKALV
GVGAAAGGDGETGMETEFIALTNPYTDDLSGGMRVRLLYQGKPRPDAQVEIFDRAPDGTVSVHLARTDTV
GIASVPVAPGHDYLLDAVVLRPAPEAERAVWQSLWAGLSFAVPIR
>gi|56696927|ref|YP_167289.1| glutathione S-transferase family protein [Ruegeria pomeroyi DSS-3]
MIRFRQHDPGAKTLSGKFIIHHIPVCPFSQRIEILLALRSLSDAVEFRVVDITRPRDPELLAKTRGTTAL
PVLETPDGRIIKESLVILRYLDEVLPGAPLRRIDPAEHAIESMLIAKEGAFVTAGYLYVMNQDRSQREAH
LDRLLGLYRGLDDFLVEHNPKGTWLFDGFGLAEAVYTPLFKRFWFLDYYEDFALPDDPAYDRVRVWRAAC
IAHPATDQVSEEEIVKLYYDYALGAGNGALVDGRTVSSFAFEPDWRSRPWPPRDKYDGTASDAALGLLSV
>gi|56696928|ref|YP_167290.1| PfkB family kinase [Ruegeria pomeroyi DSS-3]
MTQTSDILCIGSVLWDVIGRSASHMRQGSDVPGRITRLPGGVAMNIAMTLARFGMRPTLLTAIGRDAEGD
ELIRACTQMGMCTDHIYRSEDLPTDRYMAVEGANGLIAAIADAHSLEAAGAKILRPMLDGPLGSAAAPHA
GPVALDGNLTLSLLEEIAHSPAFALADLRVAPASPGKAERLLPFVRQGRATLYVNLEEAGLLCQTEFTDS
ASAAQALLKRGAQRVLVTDGGRSASEGDADRLITQTPPAVLVTRVTGAGDTFMAAHIAAEAQGADRDQAL
SRALHAAATYVSGETPL
>gi|56696929|ref|YP_167291.1| indigoidine synthase A family protein [Ruegeria pomeroyi DSS-3]
MIDLHLSAEVHAARVAGTPIVALESTIITHGMPYPQNVETARAVEQDIRDAGAVPATIAVIEGRLHVGLD
PDQLDALGQAQGVAKLSRADMAACIATGGTGATTVAATMIAARFAGIEVFATGGIGGVHKGAEQSFDISA
DLHELAETPVTVVAAGAKAILDLPKTLEVLETLGVPVIAYGQDSFPAFWSATSDLPAPLRMDDSASIARA
HAARRALGLPGGQLVANPIPADAQIAAEDLAPVIAQAQAQADAQGIAGKAVTPFLLQAIFEATGGRSLTA
NIALVRNNARLAAKIARDLIALGG
>gi|56696930|ref|YP_167292.1| hypothetical protein SPO2062 [Ruegeria pomeroyi DSS-3]
MNTPFDEEPPHVKPRRFAGLRASFLTGIVVIAPVGLTIWLFWSVVGWVDSFVLPLVPHQFRPEQYIGINL
RGVGVIFLLVFTIVVGWIAKGIIGRSLIQYAEGVVDRMPVVRSVYSGIKQISETVFAQTERSFEQACLIQ
YPRRGIWAIGFVSTTAKGEVADKAETGGRLMSVFVPTTPNPTSGFLLYFPEEDVIILDMTVEDAAKLVIS
AGLVYPNDKQKGDE
>gi|56696931|ref|YP_167293.1| acetyltransferase [Ruegeria pomeroyi DSS-3]
MSTIRRACPADAAPLAALSIEIWLATYVKHGVRADYADYVLTTFTPTAMEALIAAPASTVLVADCAEGIG
GYLHLRHDSPAPAGNAQVEIDKLYVQPRHQAAGLGRALLQAGLAGLPPGTPAWLMVSSENDRALRFYRGR
GFAHVGDTHFRLNENAYLNHVFQIKAGA
>gi|56696932|ref|YP_167294.1| patatin family phospholipase [Ruegeria pomeroyi DSS-3]
MVVRRINLALQGGGAHGAFTWGVLDRLLDEPDVEVAAITGTSAGALNGAAFKAGMVAGGRAGARAALDRV
WRRMGAVTDDRISGWLGAGDPAHLARMLEYSAPFALAETWSRLVSPYAYGPFYGNPLRPVVEALDFANVC
AHQGPKLFICATRVRTGKIRVFAEEEITTDAILASACLPTMFQAIEIDDPETGRREAYWDGGYTGNPALF
PLFNRDLPDDVVIVNINPLERDALPVTPQQIQNRINEISFNSSLLRELRAIRFVQRLLEDGTLERGRMSR
VLVHMIADDALMNSLSVATKVVPLPQILDRLKQAGRAAADSFLDAHKTDLGQRSTVDMEAMFG
>gi|56696933|ref|YP_167295.1| D-beta-hydroxybutyrate dehydrogenase [Ruegeria pomeroyi DSS-3]
MSLNGKTAIVTGSNSGIGLGIARELARAGADVVLNSFTDRDEDHALAAALAAEFGVSARYIKADMSQGAE
CRALIAQAGRCDILINNAGIQHVAPIDTFPQEKWDAIIAINMNSAFHTMAAALPMMRAAGWGRIVNIASA
HGLTASPFKAAYVAAKHGVVGMTKTVALETAQDPITCNAICPGYVLTPLVEAQIPDTMEKYGMSREDVIK
KVMLERQPSKEFATVEQLGGTAVFLCSDAAAQITGTTISVDGGWTAL
>gi|56696934|ref|YP_167296.1| ABC transporter, periplasmic substrate-binding protein [Ruegeria pomeroyi DSS-3]
MRPDYFRPFRPLTAGIALLLGASFADAESRHAIAMYGAPALPPDFVSLPYANPDAPKGGRVVFGNTGGFD
SLNPFAQKGTFPWQMPFWSYESLMGRSWDEPFTLYGLLAESVEVPPDRAWVEFTLREEARFSDGSPVTVE
DVIWSYQTLGTEGHLRYRGFWSRIASIEATGPRSLRITFADEDRELAMLAGLRPILQKAQWEGRSLSEGN
IHDIPIGTGPYVVSAYEPGRYVTFARNPDYWGADLGFRRGTMNFDEMRIDFFGDGTVLMEAFKAGELSAI
REFNAQKWDSAYDFPAAQRGDVIKTEIAHGKPSGMTGFVINTRRAPFDDWRLREALLLAFNFEFINDTVT
GGVMPRITSYFSGTDLAYRPGTASGREAELLAPFAADLPPGTLEGYALPQGDGTARNRTNLRRAAQFLEQ
AGFRIEQGQLLGPDGAPLALRFLLRQGDSDMQTVLEIYTRALERLGIAAQIEKVDNAQYTARVAELDFDL
TPFRRDLSLSPGNEQRLYWGSHSAGQPGTRNLMGAASPAIDAMIDRMLAATTEDELTAATRALDRVLTAG
RYVIPIWRFDVGRIAHIRQLRFPPNPPIYGDGPQYMPDVWWYQD
>gi|56696935|ref|YP_167297.1| hypothetical protein SPO2067 [Ruegeria pomeroyi DSS-3]
MLTWTDLTQDWASAFARAKRRFPNLDDGDMPFLKLDRDRFEAYLAARHNLTLDEAREELRDYLYVEALNR
ELES
>gi|56696936|ref|YP_167298.1| DNA-binding protein, putative [Ruegeria pomeroyi DSS-3]
MTKRDPSTLIRIARENGAEAEAEPLDLGARVRELRKARDWTLEQAASQAGLARSTLSKIENGQMSPTYDA
LKKLAVGLQISVPQLFTPPQKGQVNGRMTVTKSGSGSGHATATYEHELLADSLTKKQMLPYRARVRARAM
EEFDGWVRHDGEEFLYVLTGVIRLYTEFYEPIEMRRGDSAYYDASMGHNVVSVSDEDATILWVTSLV
>gi|56696937|ref|YP_167299.1| benzoate-coenzyme A ligase, putative [Ruegeria pomeroyi DSS-3]
MLSIFDQGPPPPCPAPFNLAAHVMRHARRQPDKVALSVLRPDGAEEWSYARLEQAILGTATGLLQAGLVP
GDIVLMRLGNTVEFPIAYLGAIAAGIVPVPTSSQLTEPETARMIADLSPAAILRAPDVACAPHPRQIGIE
ALNAMHALPPADYALGDPERLAYAVYTSGTSGKPRAVAHAHRAIWARQMMVEGWYGLTPEDRLCHAGAFN
WTYTLGTGLMDPWAIGATALIPEPGTDIAALPGLLAAHDATLFAAAPGVFRKMLQGAGKLDLPALRHALC
AGEKLPRALHESWTRATGTELYEAFGMSECSTFISSSPAHPARGEALGQPQVGRRIAILGLDGPVPQGQP
GTIAVHRGDPGLMLGYLNAPDEAAARMQGDWFLTGDQGAMAIDGQITYLGRDDDMMNAGGYRVSPVEVEA
ALIRFPGIEQVGAAAVEVKPDTYIIAAFYTGPAELDAAALSTYVEANLARYKQPRAFVHLPALPTGGNGK
LLRRALPAYFKAPQP
>gi|56696938|ref|YP_167300.1| DSBA-like thioredoxin family protein [Ruegeria pomeroyi DSS-3]
MTQTVKLDILSDPICPWCYIGKTQLDKALAAIPDHPFVIEWHPFQLNPDMAPEGMDRREYLERKFGGKEG
AVRAYAPVVEHAEKAGLAIDFEAMQRTPNTLDAHRLIHWAGVEGKQTEAVDALFAAYFTEGRDIGDAEVL
ADIADSIGMDAAVVLKLLKSDADRDDIAKRDSHSREMGVSSVPTFIVANQHAVPGAQPPELWEQVIREIM
SQIETTSA
>gi|56696939|ref|YP_167301.1| Bcr/CflA subfamily drug resistance transporter [Ruegeria pomeroyi DSS-3]
MADRMSKAEFIALIAMMFATIAFSIDSMLPALPEIGQELSPEAVNRAQLILTSFVLGMGVGTFFTGPLSD
AFGRKPVIYGGAALYILASAVALFSSSLELVLAARVAQGLGAAGPRVVAMAVVRDLYAGRQMARIVSIAM
LIFTLVPAVAPLLGAGVIALVGWRGIFVSFILFAGIVVLWLGLRLPESLPVENRRPFRGPLLADAVCQMF
AHPTVRLSILVQTFCMGTLFTMLTMVQPVYDVIHGRAESFPFWFALVALISGSASLLNAALVVRLGMRRM
VTWSLGAQIVITTGMIASGWVELSPDVQFGLFVAWQTSVFFMAGTTLGNLNAIAMEPMGHIAGMAASVIG
AVSTVLAAAIAAPIGLLFDGSMAPLTTGILIMCTLGFALMLHMGRIEERVIA
>gi|56696940|ref|YP_167302.1| TPR domain-containing protein [Ruegeria pomeroyi DSS-3]
MTMTDYGYDLGQYSCPVTTAAPEAQLWFDRGLIWTYGYNHAEAAACFRRALEHDPDCAMAHWGLAYASGP
NYNMPWERWDSATRAEALATSYDASQAALARVAGGTPVEQALIRALPARYPQRELDADMHRWDHDFADAM
RAAFAAHPGHLDLRAIYAESLLNLTPWQMWDLATGQPAAGAATREAQEVLETALSEAPGAMHHPGLLHLY
VHLMEMSPTPEKALKAADVLRTLVPDAGHLVHMPTHIDVLCGQYHDVVHWNRRATLADRKYLDREGAFNI
YTGYRIHNCHFAIYGALFLGQMQPALEANRDLWDSVPEEMLRMESPPMADYFESYMAMGPHILIRFGRWD
EAIALEPPADPDLYRTLTATVHYARAVAFAATGRVAEAEAEEQVFLAAAARVPESRLLHNNRVVDLLEIA
KEMLRGEIEYRKGSYDLAYAHLRRSIELDDTLPYDEPWGWMQPTRHALGALLFEQGHVDEAETVYRADLG
LGGQLSRAAVHPDNVWSLKGLHDCLKARAETVEIIQIRQRLDLALARADRAVGASCFCAQAAMRAAG
>gi|56696941|ref|YP_167303.1| hypothetical protein SPO2073 [Ruegeria pomeroyi DSS-3]
MLLCPSSDAGGRVNMRAILLPLLLCLAQPVLAERQSFPPRDEAADNPAVLAARDALRAAVAARDLGRLSA
AACADLSLSDDGPGGPEELRQMLTVSDTNSETTVETRWQMLAKALAAPGYFDAEGEFWMPHHWRIQLPAR
IDPAQAHFVTGANVNLRKTPERTGEILTQVSFEVVLTAGFDPGAEYRAIILSDGTRGYLHRDYLTPMSGP
RAALAQSPEGIWQLCTFTSGR
>gi|56696942|ref|YP_167304.1| transcription-repair coupling factor [Ruegeria pomeroyi DSS-3]
MGGAPEGFDARLILNEVARAGAPVLHVARDDKRLEAMRAALAFFAPDLPVFVFPSWDCLPYDRVSPNADV
SAARMATLAALVHQMPDRFVLLTTLNAATQRVPARDLLREAAFSAQVGRRVDEQALRQFLVRMGFSQSPT
VMEPGDYAIRGGIIDIYPPGDSGPVRLDFFGDVLDGARRFDPATQRTTEKLDLIELAPVSEVILDEAAIT
RFRQNYRIEFGAAGSDDPLYEAVSAGRKHQGVEHWLPFFHERLETLFDYLPAATVTLDDQVTPTRLARWD
SIQDQYETRRLAMTDRSRTDSVYKPLPPGLLYLDDGDWSAQLADRRVMQFNPLPQASGPGVIDAGGRIGR
NFSPERALENVSLFGALVDHLKVRMADGPVLIASYSEGARERLTGLIEDEGLAEAIPVTNGTRIGKRGLH
LAVWALEHGFEAPGLTVISEQDVLGDRLIRQPKKRRKAENFLTETQSLTPGDLVVHVDHGIGRYRGLEVI
TAAGAAHECIALDYAEEARLYLPVENIELLSKYGHEEGLLDRLGGGAWQAKKAKLKERIREMADRLIRVA
AERALRKAPVMDPPPHAWEDFSARFPYQETDDQLRAIGDVMDDLHSGMPMDRLICGDVGFGKTEVAMRAA
FVAAMSGLQVAVIAPTTLLARQHAASFRDRFRGFPLEVRQLSRFISAKEAQQTREGLARGTVDIVIGTHA
LLAKGIRFQNLGLLIIDEEQHFGVGHKERLKQLRSDVHVLTLTATPIPRTLQLSLTGVRDLSIIGTPPID
RLAIRTYVSEFDAVTVREALLREHYRGGQSFYVVPRITDLPDIEAFLKEQLPELTYVVAHGQMAAGELDD
RMNAFYDGKYDVLLATTIVESGLDIPTANTMVVHRADMFGLAQLYQIRGRVGRSKARAYAYLTTKPRARL
TPAAEKRLRVLASLDTLGAGFSLASQDLDIRGAGNLLGEEQSGQMPDVGYELYQSMLEEAIAKIRSGQME
GLSEADDQWAPQINLGVPVLIPEEYVPDLDVRLGLYRRLSSLTTKVELEGFAAELIDRFGKLPKEVNTLL
LVVRIKAMCKRAGIAKLDGGPKGATIQFHNDKFASPAGLVEFIQAQKGLAKIKDNKIVVRRDWRSEADKI
KGAFAVARDLADKVAAEKKSKA
>gi|56696943|ref|YP_167305.1| hypothetical protein SPO2075 [Ruegeria pomeroyi DSS-3]
MDWYSSIFELIDMRSFSNLWFWIALAVVWSSASHWVLGVPYDMVTRARRVGGQAAQDLNDIVRINVNRML
YIVDTAGLLLFSFSCFMLSVLAMLGFYYGMEFAQAVFMLAFPMSLVALLNLATARRVRAQELMGEDLARA
IGRCRIYTQIIGMVSIFFTSLWGMYQNLSIGVLG
>gi|56696944|ref|YP_167306.1| delta-aminolevulinic acid dehydratase [Ruegeria pomeroyi DSS-3]
MTPTVAAFPAARFRRARKSPALRALVRENSLGVDDLIWPVFVRDGEGIEEPVPSMPGVMRRSVDRIAQAA
VEAQALGIPAICLFPYTDAALKTEDCAEAWSPDNLSNRAIRAIKAAAPDIAVMTDVALDPYNINGHDGYV
VDGEIVNDETVEALVKMTLAQAEAGADIIGPSDMMDGRIGAMRQALEAAGHRNVLILSYAAKYASAFYGP
FRDAVGASGALTGDKKTYQMDPGNSDEALRLIQRDLSEGADMVMIKPGLAYLDICHRVKQSFGAPTYAYQ
VSGEYAMIKAAAQNGWIDGDKVMLESLLAFKRAGCDGILTYFAPDVARILQG
>gi|56696945|ref|YP_167307.1| twin-arginine translocation pathway signal sequence domain-containing protein [Ruegeria pomeroyi DSS-3]
MSSIHTPRLSRRGFALGMAGLTLTAACGNGVGNSNASQIDARVNATLTEMYAQFPNTVEISHKAAGMLVM
PLLTEAGFVFGGGYGRGALRVDGVTVDYYSAVKGSAGLQIGAQQYAHVLFFMTQGALSEFRRSSGWSAGA
DLEYVVSDQGDSLAADTNTLRSPILAAVFGRAGLRVGATLEGTKYTRIIP
>gi|56696946|ref|YP_167308.1| penicillin amidase family protein [Ruegeria pomeroyi DSS-3]
MGLLFRWLLRLAAGLIALAVAAVALVYYLASQSLPDYDQTQEVAGLTAPVEIVRDTHNVPHIFGASDPDV
FFGLGYAHAQDRLWQMTMLRRTVQGRLSEVFGPRTVAIDRLLRRLDLARLAQQSVSAQDAYTTAALKAYA
AGVNARLAEINDEALGRGAPEMFLFNAPVAPWQPADSLAIIKLMGLQLSGHLEEEVLRARTSLMLGDPAR
LVDILPDAPGTGTAALPEYAQLFPGLPRYAAGRDTPHDPLMPLPRRGLAGASNAWAAAPSRSASGGTLLA
NDPHLGFAAPSTWYLARLELANGGVIGGTIPGMPAVLLGRSERLGWGLTSSYMDDQDLFVERLNPDNPEE
YLTPDGYKTFESRPSIIEIKGAAPITLTLRWTENGPVLPGSVYDLETITPPGHVMSLGWTMLDARDTSMS
AALALINAGTVQEAIRASEAYVGPSQNLTLADRETVALKMVGAVPRRDPRHQSQGRLPAQGWRAENRWQG
RMPYASNPEFVSPVGGILGNTNNKLLERPFPNHVSFVWGDTQRVTRWQKLMQSREVHTRDGFIEAQLDPV
SPAARTLLPLIGADLWFTGEAAPEGTPERQRQIALSLLAEWNGEMSEHLPEPLIYAAWVRALQKRLITDE
LGPLADEYKQVEPLFIERVFRDIDGASVWCDIRQSAPRETCTEIARLALDDALVWIGDRYGSALESLRWG
DAHQATHDHPVLGEVPVLRYFVNIRQSTSGGDHTLQRGRTSGEDPDPFRNVHGAGYRGVYDFADPDSSVF
VISTGQSGHFLSRYYDDQAQLWRRGEYIPMSLDADLARAAAVGVTRLLPAPE
>gi|56696947|ref|YP_167309.1| Na(+)/H(+) antiporter,-like protein [Ruegeria pomeroyi DSS-3]
MQSYAADLIALGLLFLTGLAADQLGARSRLPRVTLLLICGLLAGSAGFDLIPESLAALYPIISVIALSMV
AFLLGGELSLRTLSGHGRAIVVISVMVVLVTQLTVSAGLAMIGMPLAAALMVGALATATDPAATLDVIRQ
GRASGDFPRRLKGIVAIDDAWGVLLFGLVAVLAGAVEGNGSAHGLLGGALVEIAGSVALGLAVGLPGASL
TGRLSGGEPLRIEALGLVFLTAGLSLWLDLSYLIAGMTAGAVIVNLAHHHKRAFREIEHIEWPFMIVFFI
LAGASLDLSALWAVGPLLMGYVALRVLGRVLGGWAGAALAATARGERPWYGPALLPQAGVAIGMALIAGD
LFPQYADMITALAIGATVVFELAGPLAAAYALRRVRDSRDQSAA
>gi|56696948|ref|YP_167310.1| GTP-binding protein HflX [Ruegeria pomeroyi DSS-3]
MMEHDRARTRAWVLHPELKSDLDRRDPVPALEEAVALAAALPDLDVVGSGIVRLPKPHPGHLFGSGKVEE
LATLFHDNEVELVLIDGPLSPVQQRNLEKAWKVKILDRTGLILEIFSDRARTREGVLQVEMAALSYQRTR
LVRAWTHLERQRGGLGFVGGPGETQIEADRRAIDEQLVRLKRQLDKVVKTRELHRKARAKVPYPIVALVG
YTNAGKSTLFNRLTGAEVMAKDMLFATLDPTMRRVVLPDGPEVILSDTVGFISDLPTELVAAFRATLEEV
LAADLIVHVRDIHHAATEEQARDVETILASLGVDEGRPKFEVWNKVDLLDPDKRAALRERTARDPSLFAV
SAVTGEGLESLLTAIAEALAETRSEAVLTLGFADGKRRAWLFAQDVVQAEEQSDDGFRLTVLWTPRQAAR
YAAL
>gi|56696949|ref|YP_167311.1| RNA-binding protein Hfq [Ruegeria pomeroyi DSS-3]
MASDRQNLQDAFLNHVRKTKVPVTIFLINGVKLQGVITWFDNFCVLLRRDGQSQLVYKHAISTIMPAQPI
SLYEGEDAN
>gi|56696950|ref|YP_167312.1| Trk system potassium uptake protein TrkH [Ruegeria pomeroyi DSS-3]
MVRRRQTSETGLLRQLPLALLIWGLFSLMMWVPAVYALTLNDHPTSRSFFYAGILGLVVVTTISLARAGR
PSRHGLLGQLAVLLSTFAVLPLFLAVPFHDALKTTSFLNAYFEMVSAITTTGAEMFPDPGRLSAPLHLWR
AQVGWLGGLVMWIAASAILAPLSLGGFEVTAQGQPGRVLVGQGESVDPRGRLLRVAATLAPVYAGLTLVV
AILLLAAGDSGLVAICHAMSVMATSGISPVGGLSGGASGLTGEAILFLFMFFALSRLTFSSDTAMRGHAR
LDQDPEFRIGLLILLGVPALLFLRHWSGAIDIASGENLTLALRALWGSLFTVMSFLSTTGFESTDWAEAR
QWSGLGTPGMILLGLSVIGGGVATTAGGVKLLRVYALYLNGTRELQRLVHPSSVSSATGRNRRIQRGGAF
IAWVFFMLFAISLAAIALALAAAGSDFETAMVLSIATLSTTGPLIEIGAQEPIRLIEMPAAAKLILSGAM
IIGRLETLAFIALITPALWRN
>gi|56696951|ref|YP_167313.1| potassium transporter peripheral membrane component [Ruegeria pomeroyi DSS-3]
MKVIICGAGQVGWQIARHLSGELNDVTVVDNNPDLVRRATETLDVQGIAGFASYPDVLEKAGARDADMII
AATYSDEVNMVTCQVAHSVFGIQRKIARLRSKSYLNAIYSDLYRREHLPIDVVISPEREVAAAAMRRLSA
PSAFDTETFMDGQAQLVGLSVDEASPVINTPLRQLTDLFSTLRAIVVGIRREGTLFAPEPGDQIFAGDEC
YVFCHVDDVSRTMEVFGKTHKKQDRVVIVGGGNVGLEVARALEEHKTRIHAKVIERDRGNAERAAEALER
TIVLHGDGMDAGLLAEAGIARADAMLAVTDDDRTNMLAAVRAKAEGCRLAIALINDPTLVALMPPLGIDA
YINPRATTVSSILRHIRHGRVRQVYSIGDAEAEVIEAEVLSTSPMAGQRLRDIDFPEGVLVGAVRKGDKV
LRPTGELRIEEGDVIAIFAMADDVPEVERLMQVSIDFF
>gi|56696952|ref|YP_167314.1| hypothetical protein SPO2084 [Ruegeria pomeroyi DSS-3]
MSGPGFGGTLGAMRVLIPTLAATVILTGCGPLSIYYREGVSVTRQQSDTLDCEVKALRDAPVANKVQQSP
PIFYPGRTVCNAAGQCYTTPGSWAPGSVYTVDVNSGLRARVEQQCMAAKGYAPVELPRCREAVAAQVQPV
RGAKLPALGPTSCVVTYQDGSFQVVTPRPAG
>gi|56696953|ref|YP_167315.1| nitrogen assimilation regulatory protein NtrX [Ruegeria pomeroyi DSS-3]
MSDILIVDDERDIRELVSDILEDEGYTTRLAGTSDECMAEINAEPPGLLILDIWLKDSRMDGIDILKAVK
RDNPDVPVVIISGHGNIEIAVAAIKQGAYDFIEKPFNIDQLMVVIRRAMETSRLRRENAQLKRREVTCAD
MIGQSAAFRAMIGQLDKVTKSNGRVMLRGPAGAGKEIAARYIHAHSNRANAPFVTVNCAGVEPERMEEML
FGRESQERGVEPGLLEQAHGGVVFFDEVADMPLGTQSKILRVLVDQQFQRVGGADKVRVDLRVISSTNRD
LEVEIQAERFRQELYHRLNVVPIAVPSLEDRREDIPVLAAHFIDQCHQGQGLPLRALSEEAVALMQTMSW
PGNVRQLKNLIERVLILGEGTGDIEARELPSDEDKAAEEGRVVLSGALATLPLREAREAFEREYLLTQIN
RFGGNISRTASFVGMERSALHRKLKSLGVVTSSKSGARVAHMDEEIETVE
>gi|56696954|ref|YP_167316.1| nitrogen regulation protein ntrY [Ruegeria pomeroyi DSS-3]
MATRSQNGPFLSLSEWRKTRKARNIGTLGLVVLGPALTVATYLVTGPFDLGAGSTTLRLILLADLVYILA
LAALVLSQVGRLVAARREKSAGSRLHLRLIGVFTLLALIPTITVAIFAGLTLNIGLEGWFSDRVRNVVGS
SLAAAEAYEQEHREGLTQDARALARYLDQARTLNFFISDAELRGVLAQGQGQIQRGLREAYVVDGIGEIR
ARGDRSYQFDYEQPEPEQFRAAQTNGHVIIQDWDNNEFRALVMLQAYPDRYLYVSRVVDGEILNLLDDTK
ETVHLYQQLENERGRVLFEFGLLYLGFAVILILAAVWLGLWFAERLSRPVGRLTTAAQRVGGGDLGVQVP
EEPGDDEIAMLGRYFNQMTRQLKGQRDTLLENTHQIERRRRLFDSVLSSVTSGVVGLDSQGKVTFVNRSA
ERLLDWSGDEQSLDLAVAVPEFVSLFESLVAAGQETVQAEIKVTRKGQLENLLVRMSTRRGEDDTLEGYV
IAFDDVTDLVSAQRMAAWGDVARRIAHEIKNPLTPIQLSAERIKRKFSRKLDEEDCDSLESMTDVIVRQT
NDLRRIVDEFSKFARMPEPDRHEEDLTRLVRDAVLLQQTGQPDVRVRADLPEAPLMGNVDATMLSQALTN
LIKNAGEAIETLVKKGAPEGLAPEIRVTLTGDAEGSQITIADNGIGLPEDRARLFEPYVTTRDEGTGLGL
PIVKKIIEEHGGTLHLEDAPVFDGQDHFGAMAVIRLPGYDPASRTAMQRQAARNKAKAGPT
>gi|56696955|ref|YP_167317.1| nitrogen regulation protein NtrC [Ruegeria pomeroyi DSS-3]
MDGTVLVADDDRTIRTVLTQALTRAGCKVHATSSLTTLMRWVAEGKGDVVISDVVMPDGNGLEMLPKIAQ
DRPGLPVIVISAQNTIMTAIQAAEAEAYDYLPKPFDLPDLMKRTARALEQKRRTVSSEPREEGAERPDEL
PLVGRTPAMQALYRLVAKVMNTDLPVMISGESGTGKSLIARTIHDFSDRRTLPFISVTASDLMDLEGPAR
VLARVKGGTLLIDEIADIGDELQGRIVRMMDAPGDYVPRFMATSQGDPARAMEAGKLRRDLYYRLCGAPI
HVPALRERVDDIPLLTEYFLAKAERDGAPKRWLGAGAAELFRIYSWPGNVRQLENAVRRLSLISRAEEIS
RTEVEQVLGNQPELEPALGGRGDSEKLSASVARHLQRYFDLHGNVLPPPGLYQRILREVEAPLIEIALEA
SGGNQAKCADLLGINRNTLRKKITDLDIEVTRRRKLM
>gi|56696956|ref|YP_167318.1| nitrogen regulation protein NtrB [Ruegeria pomeroyi DSS-3]
MSAESALWASLPVPAFLIDADDRIVDVNSAAEGFLNLSRKAVLGHPIWDQLAIDAPIEPAFERARGQGTP
LFVNDIDVGSGNRAPLQCAIQIAPLVGSPGVMMMLVSPRELAGRMTQSHSVKSAAQSAIGMAEMLAHEIK
NPLAGITGAAQLLSMNLAPEDLELTDLIVAESRRIVKLLEQVEQFGNLSVPDFKPVNIHDVLDRARRSAL
LGFGAHMKIIEDYDPSLPLAYGDPDQLLQVVLNLLKNASEAAPGGGTIRLRTYFEHSFRLRRNDGSGQSL
PLQVEVIDDGPGLPEEIRADIFDPFVSGRENGTGLGLALVSKIISDHDGWIAVDSVPGRTVFRLSLPRVP
KDRGEKESN
>gi|56696957|ref|YP_167319.1| tRNA-dihydrouridine synthase, putative [Ruegeria pomeroyi DSS-3]
MTLHLGDKTLAPPVILAPMAGITDRPFRDLVMEFGAGMVVSEMVASQEMVQAKPGVRERAELSADVENTA
VQLAGRDTHWIAEAARQVADRGARVIDINMGCPAKKVTNGYSGSALLKTPDHALRLIEAVVAAVDVPVTL
KTRLGWDDTLMNAPDVARRAAEAGVRMVTIHGRTRCQFYKGRADWAAIAAVREAVDVPLIANGDITCAHT
ARQALDRSGADGVMVGRGAQGRPWLLAQIAHALYGTPAPEVPQGAELADMVARHYQAMLDFYGRELGLRV
ARKHLGWYMDEAATPAPLRKLVLTARDPETVLHLLPEALCGNAEEAA
>gi|56696958|ref|YP_167320.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/ 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [Ruegeria pomeroyi DSS-3]
MKQRPSHNESPRIKGQELRICLIFNRFTTGHCQRRRHPIKIGHHPPAPRPRTAMTTAAIIVAAGRGTRAG
GGVPKQWRPLAGRRVADWTLDRFALRQITHVVLVLHPEDHDAWDEFATTPLILAPGGSDRAGSVRNGLAA
LDGLGITKVLIHDVARPCVSAATIGAVLDALDAHPGAAPGLAVTDALWTGAEGLVTGTRERDGLFAAQTP
QGFRYDAIVAAHAAHPGGAADDVEVARAAELTVAIVPGDPDNLKITRAEDFARAERILRQDMDVRLGNGY
DVHRFGPGDHVILCGIKVPHDRGLQGHSDADVGMHAVTDALYGALVEGDIGRHFPPSDPQWKGAASEIFL
RHAVDLVRARGFAVSNIDCTLVCEYPKIGPHALEMQAEMARIMGLEASRVSVKATTSERLGFTGRSEGIA
ALATACLVKP
>gi|56696959|ref|YP_167321.1| phosphatidylglycerophosphatase, putative [Ruegeria pomeroyi DSS-3]
MSIASLIGTVGGVGYLRPAPGTWGSLAALPLAWVLHQLGGFPLLALATLGAFVAGLWATRVMTAGQTDHD
PSEIVIDEVAGQFLALWALSLPAWSHGIEISALWPGWIAAFVLFRLFDITKPGPVGWADRRGDPMGVMLD
DIIAGLFAAIGTALLAALSHGVLGL
>gi|56696960|ref|YP_167322.1| competence/damage inducible protein CinA [Ruegeria pomeroyi DSS-3]
MNVADLLERAKARGTKIATAESCTGGMVIAALTDIPGSSAVVERGFVTYTNSAKQEMLGVRKASLDAYGA
VSEQVAREMAEGALDHSRATLAVAITGIAGPGGSEFKPEGRVCFALAGDGIATSSETVDFGAPGRAQVRA
AARDHALALLDRGLSLIAP
>gi|56696961|ref|YP_167323.1| ammonium transporter [Ruegeria pomeroyi DSS-3]
MKKSGKNRHVSGRPPLFPATEIRSTAPDTRNRSKGERPMNGADTAWIIVATALVLFMTLPGLALFYGGLV
RARNVLSVFMHCFAIACLMSILWLVAGYSIAFGGGTSGFWGGLDKVMLIGVTADSLSGTLPEILFFAFQM
TFAIITPALIVGAYVERVGFGFVLTFSGLWMLLCYAPVVHWIWGGGMMSDGGIFGETGVRDFAGGIVVHE
TAGLAALIIAVMLGPRRNRTTPPHNPGFVMIGAAMLWVGWFGFNGGSQLAADGGAAMALTVTHISAATAS
LSWALWERIKYGKASLVGLVTGTIAGLASITPASGFVGPAAALLIGAVAGILCQEAVNLVRNWLRIDDTL
DVFAVHGVGGIFGTLMIAVLGAGSWVAQLGGLVFVGLFTTGVTIVLVKVVALVTPLRVDAETETNGLDLS
VHGERAYDMSS
>gi|56696962|ref|YP_167324.1| ACT domain-containing protein [Ruegeria pomeroyi DSS-3]
MDLNYRRLGTQDVAAWRALMLEGTRDFPLGFLQSAAEVQALSGERCREILGYGALRGVFRQDALLGLCGY
RPQMFARMAHRVELGPFYVTRKAQGTGVADRMMAGAIAEARSEGRSLVELYVDAENHRAIAFYQRHGFRL
LARLPDCVRIDGGARVDLFYRLDLSPRDGA
>gi|56696963|ref|YP_167325.1| MmgE/PrpD family protein [Ruegeria pomeroyi DSS-3]
MPELTRTLAEFATGSITTTPAARLVTSLSALDWIAVGRAGVEEPVSRILREMVLEEGGTARAHLFGGGAA
PLRGAALVNGTVSHALDYDDTHFAHIGHPSVAVFPAVLAMAESRDAAIVELLEAALVGMELSVRVGLWLG
RGHYQAGFHQTATAGAFGAAAAAGRLAGLTPQRMAQALGLTATRAAGLKAQFGTMGKPYNAGLAAAAGIE
AVELVRRGFDANPLAMEGEYGFGATHHGADEMSALEGLGESWLFDQVSHKFHACCHGLHAALEAARSLDI
AAPEVAQLSVRTHPRWLSVCNQQAPSTGLGAKFSYGTVLAMRALGHDTARLDSYSDALCADPRLIELRDR
VEVIGDDSLSETQAHLSLLRRDGQRQEVSHDLMAPLTLAEREERVRAKAAKLIGGSLADEIWALLRTGGG
AADLALRLSAS
>gi|56696964|ref|YP_167326.1| aromatic-rich family protein [Ruegeria pomeroyi DSS-3]
MPTHSETRRLPYSAQQMYDLVADVAKYPQFLPWCAAARIRSITPQGAAQVMEADLVISFKVFRERFGSRV
TLFPGEMRIDTEYLDGPFKYLKSDWAFADAPEGGCDVSFHVDFEFRNAILQGVIGLVFNEAMHRIVRAFE
ERARALYG
>gi|56696965|ref|YP_167327.1| hypoxanthine phosphoribosyltransferase [Ruegeria pomeroyi DSS-3]
MTDRAYVIDEMISAKAIAARIEALCREIQTEFADTDKLVVVGLLRGSFVFIADLVRELNLPIEVDFLEAS
SYGDAMESSREVRILKDLRSPIEGRDVLVVEDIVDTGHTLNHVTHLLLSRMPKRLKSIALLDKPSRREVD
FRADWIGFEIPDEFVVGYGIDFAQRNRNLPFIGKVRFTEA
>gi|56696966|ref|YP_167328.1| LysR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MNWDDLQFVLSVVEAGSVAGASRQMGVNHATVLRRIAAFEESVGTQVFDRTPRGYVLRPDRLRLIAAARE
VGQAVQSVHQLAQGLDAPLAGHVRVTSTDTLCQCLLPEILADLRQSAGELRLSLISTNSHLNLSRLEAEL
TLRPAPVLPEGLVGESPISMAFAAYAAPGCENAGWLGFDGAMRRSRPWAWLEPQLERGAAIGSADSFLVL
REMVAQGLGRALLPCFIARDDPRLVRLEVGLPPETATPIWVACHEELADVPRLIRVRGLLCQALRARAAR
FGP
>gi|56696967|ref|YP_167329.1| cytochrome c-554 [Ruegeria pomeroyi DSS-3]
MFAKTKTAIAAATLCAVGGLALAGSHAQGEFAREIKARQAQMTLYAFNLGILGAMAKGEAEYDAEAAALA
ANNLAAAKSIWMPTAWPAGSDNASVEGTRALPAIWAADSDIGAKSQAMGEAVAALQAAAGTDLEALRGAI
GPVGASCGGCHKPFRAEE
>gi|56696968|ref|YP_167330.1| diheme cytochrome c-type [Ruegeria pomeroyi DSS-3]
MKLLRIGAVLALAGLVVFWLITRPERLAQGALDGVEGDAARGALVFAAAGCASCHAAPGAEGEAKLVLAG
GEGFASPFGTFYAPNISPSPDHGIGGWSQLDLANAMMHGTSPEGQHYYPAFPFVSYANTELGDIADLYAY
LITLPVSDTPSRPHDVGFPFNIRRGLGMWKLLNTGKGWVMTDPADAQVTRGRYLVEALGHCGECHTPRDA
LGGLQRDKWLSGGPIPGSKGRFPDLTPKALTWSAEDIAYYLETGFTPDYDSAGGAMADVIQNTAQLPPED
RAAIAAYLKALPVN
>gi|56696969|ref|YP_167331.1| amidohydrolase family protein [Ruegeria pomeroyi DSS-3]
MTPGDLARLTALRHALHRAPEISGAEARTAATVAGLLREMGADRVLTGLGGHGVVAVFDSGVAGPSVAIR
CELDALPIPEETDLAYASETPGHGHLCGHDGHMVIVLAVGEALAARRPARGRAILIFQPAEETGKGAMAL
RADPRFAEVAPDTVLSLHNLPGLPLGMVELCARATNCASRGMAIRLFGKTSHAAAPQDGLSPAGVMAALM
PRLAALGPGGALDDGFALTTLTHARLGEPTFGVAPGEGALWVTLRTVTDARMATLMGEAEALVRAHAEPA
GLRVEISYDDVFEACTNHPAAVDLLAGACRAGDVPLVLTEQPQKFSEDFGQFGKGAEAAMLWLGAGVGHP
QLHNPDYDFPDALIPVGAGIFERALRSVLGTGPVNSQAAP
>gi|56696970|ref|YP_167332.1| lipoyl synthase [Ruegeria pomeroyi DSS-3]
MRDLKIPEQRHPEKAHRPDQAQPKKPDWIRVKAPGGKGYADTRRIMRDNNLVTVCEEAGCPNVGECWSQG
HATMMIMGEICTRGCTFCNIATGRPDALDAFEPGRVAHAVEKLGLNHVVITSVDRDDLADGGAEHFAQTI
RAIRHRSPSTTIEILTPDFLKCAPEVLEVVVASKPDVFNHNLETVPGLYPEVRPGARYFHSLRLLQRVKE
LDPSIFTKSGIMVGLGETEQQVRQVMDDMRAADIDFLTIGQYLQPTPKHHRVDRFVHPDEFASYEKAAYG
KGFLMVSATPLTRSSYHAGDDFARLRDARQKKLGLA
>gi|56696971|ref|YP_167333.1| anti-oxidant AhpCTSA family protein [Ruegeria pomeroyi DSS-3]
MKTGASLPNVIFHTRVRDEAVGGPNPYRWQDMTTAAYFAGKRVVLFSLPGAFTPTCSTYQLPGFENGFAD
FQNQGIDAIYCMSVNDSFVMNKWAEAQGLKNVTVIPDGSGEFTRKMGMLVDKDNLGFGFRSWRYAAIVND
GKIEAWFEEPGLMDNCPEDPYGVTSPETVLNWLVAANSEVAA
>gi|56696972|ref|YP_167334.1| hypothetical protein SPO2104 [Ruegeria pomeroyi DSS-3]
MPKIDKLPWRDHAGGAHPITGQADGPYSVRPLGDVIGLSQYGIHLERLRPGSRSSHRHWHEGEDEFVYVI
SGELILIEDEETVLTAGDAAGWPGGMPVAHCLENRSDCDAVFLVVGTRLDRDIVHYPDHDLILHRDNNRR
QYTRTDGSPIEGES
>gi|56696973|ref|YP_167335.1| LysR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MRYVSLMSFTLRQLHYFKALVEQRNFGRAAEVCHVSQPALSVQIRALEEVLGGPLVERRARDVVLTPLGR
SVLPLVDQALASADRLDRFARDQAGAASLSLGLIPTMAPYLLPGVLAELRAQNLSLRVHVREARTEQLLQ
ALHKGELDAAVLALPVSQAGLTSVELFRDRFLLAGSWSRLERLSQGVEALRPTDLQPTQLMLLEDGHCLT
DQALEVCGHDRAAAGINMGASSLATLSRLVAEGFGLTLMPELAARSELAAVPGLRLHRFRTPEPARTVGL
VRRSSTYRARWFDDLERIIRQVGEGIVTETRETQPSTPERG
>gi|56696974|ref|YP_167336.1| hypothetical protein SPO2106 [Ruegeria pomeroyi DSS-3]
MGNWAENTVPGWVPESAQRYLAHTEAGFSIRDLARGAGCHASTVLRQIRRVEMRRDDPLVDAALEALAAA
HFPPLKLSKTPVSRRGSQPEDTAPMTVPAPQTEETPDSATFDQEATRILRRLCESGAVLAVAEDMDKAVV
VRDDGKGGNTRTAVVSCAMAQALALKDWIACDKPGRISRYYLTTAGRGALGRLLAEAENRARAAQDGFAE
AQSPFAAQHRVMGDKTVDGEAGERPRRVRYNMAESPLIALARRKDRDGQPFLDDTLVRAGERLREDFELA
QMGPNIAQNWDRFLTGGARGGFQADSGIGHGPEAARNRVARALSDLGPGLSDVALRCCCYLEGLELAEKR
MGWSARSGKIVLRIALQRLKRHYEEQSGRDRLIG
>gi|56696975|ref|YP_167337.1| hypothetical protein SPO2107 [Ruegeria pomeroyi DSS-3]
MANTFPGKGTVMQDLMTMVSQLRRPRLLIRAARFGQAEYNRDRHLQRILGYGKLPRPAAALMRLMELERV
LDEQRRADDAGYSLPRHVDLLIAMMGEAQLVQTSHAPQSLQPT
>gi|56696976|ref|YP_167338.1| trimethylamine methyltransferase family protein [Ruegeria pomeroyi DSS-3]
MEEAMTRRRARGGGGAARRAERSAVVIETAKYIERNIPNFEVLNEEALEIIEANAETVLAEIGVNFVNNP
AALERWRAAGAEVEDERVRIPRGLARKLCSTAPGQFTQHARNPAKSVVVGGRNLVLAPVYGPPFVRDAQG
GRRYATMADFEKFVKLAYMSKWLHHSGGTVCEPTDIPVNKRHLDMLMAHMTLSDKPFMGSVTAPERAQDS
VEMCEILFGKEFVRDNTVMTSLININSPMTFDDIMMGALEVYAASNQACIISPFIVGGAMAPVSVAGTLT
QVLAEVLAGVAYSQLVRPGAPVIFGAFVSSIDMNSGAPTFGTPEASLVTYGAGQLARRLGLPFRSAGSFC
GSKLPDAQAAYETANSLNMGLLSGVNFMLHACGWLEGGLVADFEKFVMDADQLGVLHGLAKGVPVDAEHQ
AMGAIREVGPGGHYLGCAHTQANFKSAFWKSELLDYKPFETWEEEGARDTYALASSRVDKLMDAYQQPTL
DPDIAAALAAYVAEKKASMPDAFM
>gi|56696977|ref|YP_167339.1| GMP synthase [Ruegeria pomeroyi DSS-3]
MSQTSHDRLLIIDFGSQVTQLIARRLRELNVYCEIHPYQNVTMDFVREMAPRAVIFSGGPDSVTREGSPR
APQEIFDYGVPILGICYGQQTMMTQLGGRVESGHGTAEFGRAYVTPKGTLDILDGWFTDGREQVWMSHGD
HVAEIAPGFEVYGTSPGAPFAITADTSRHFYAVQFHPEVHHTPNGAKLYENFVRLAGFKGDWTMGAYREE
MIRTIREQVGDKKVICGLSGGVDSSVAAILIHEAIGDQLTCVFVDHGLLRKNEATEVVGMFRDNYNIQLI
HADESDLFLGELDGQSDPETKRKIIGKLFIDVFQKHADTIEGAEFLAQGTLYPDVIESVSFSGGPSVTIK
SHHNVGGLPEKMGLKLVEPLRELFKDEVRALGRELGLPQSFIGRHPFPGPGLAIRCPGEITREKLEILRE
ADAIYIDQIRKHGLYDEIWQAFVAILPVRTVGVMGDGRTYDYACALRAVTSVDGMTADYYPFTHEFLGET
ATRIINEVKGINRCTYDITSKPPGTIEWE
>gi|56696978|ref|YP_167340.1| hypothetical protein SPO2110 [Ruegeria pomeroyi DSS-3]
MSPIARAALWMTGAIASFSAMAVAGRELSAVHDTFEIMMYRSFVGVLVVSLILSVTGTWHQVSTRALGLH
ALRNAVHFTGQNLWFFAVTVIPLAQVFALEFTQPLWVILLSPLLLGERMTRVRVAAAVIGFVGILIVARP
GASSLNIGILTAALSAIFFAMTTISTKKLTRLASIGCIMFWLTVMQAVLGLVASGHDGQIALPTLGTAPY
LVLVGLAGLLAHYCITNALAIAPATVVVPIDFARLPTIAVVGMLLYGEALDIWVLVGAAVIFAGNYLNIL
AETRNTAR
>gi|56696979|ref|YP_167341.1| OmpP1/FadL/TodX family outer membrane transporter [Ruegeria pomeroyi DSS-3]
MEISRRTQMKNALSGALALCALTTAAQAGGLDRSGQGINILFEEGDAIQFRLGWTDPRVSGSLGGMPSGN
VANSFVLPHFAYKKALSDRLDFALIYDQPFGADITYDAAYPLSQNPVPGGRRDVLRAKADTDALTAVFRY
RFDRGLSVIGGLRAQRAEATVTVPAAAGYSVTTDSPVDFGYVVGVAWERPDIAARVALTYNSAIDHTLQQ
SESLNPPPPAPPGFVATLPSTSTISTPQSVNLDFQTGIAADTLLFGSVRWVDWTALVYNPPNYPPLTNLV
DYDSDTVTYSLGIGRKFSEAFSGAVTLGYERRTGDSLSDLGPTDGFWSIGLGGTYSLDKAKISGGVRYTD
LGDATTNNGARFTGNSAWSVGLQITYALN
>gi|56696980|ref|YP_167342.1| transmembrane drug/metabolite transporter family protein [Ruegeria pomeroyi DSS-3]
MSDQKTLSPRAWAELLLLGLIWGASFLAIRVALDEVPVVTAVLHRTFWAALLLWLVVWASRIALPRDPRV
WGAFLVMGLLNNVIPFGLMAWGQLYIETGLTSILNASTAIFGVLVAAAVFADERLTPRRLLGVSIGFAGV
VITIGFEHLTRFDPRSTAQLAVLAGTLSYAFAGAWARARLGGLAPQLAAAGMLTGSSLILLPAALLIDGP
VTLSLQPVTWAAIGYYALVATAGAYLLYYRVLAMAGAGNLMLVTLVIPPVAIGLGAWIRDEALPANAFGG
LALLALGLMLLNRRPRRRD
>gi|56696981|ref|YP_167343.1| hypothetical protein SPO2113 [Ruegeria pomeroyi DSS-3]
MTRPAAPISKGANSKDEGGMIYGSARDWRAASRKKVLFFGMSGLGKTHVSNRLRDNGDWFHYSIDYRIGT
RYMGEFITDNAKAEAMKVPFLRDLLMSDSIYIGSNISFENLTPVSTYLGKPGAPGKGGLPIAEYRRRQDQ
FRHAEIYALLDTEYFIDRAQRLYGYPHFICDTGGSICEWVDPEDPRDQVLSELSKHTLMIWIEGSEAHTA
ELIRRFDKAPKPMSYQPEFLSRVWEAYLAENDCTPDEVDPDAFIRWTYAQALAHRQPRYRAMARNWGITV
TAEQIGAIRDAADFDALIESSLENRPD
>gi|56696982|ref|YP_167344.1| DedA family protein [Ruegeria pomeroyi DSS-3]
MLTSLYHRTMALADHRHALWALALVAFLESSVFPIPPDLLMIPMILARPSRAWLIALVALVASVLGGLLG
YAIGAFFYDSIGAPILEAMGKGDAMEAFNTRFNDFGFWAVLTAGVTPFPYKVITIMSGWTGMPLATFVAT
SILARALRFFLVAALLWKFGAPVRDFIERRLGLVMTVFMALLIGGFFLVRYL
>gi|56696983|ref|YP_167345.1| DsbB family disulfide bond formation protein [Ruegeria pomeroyi DSS-3]
MTRNRLIMLAAGGSAAMLLAAWGFQYLGGMAPCKLCIWQRYPHGAAALIGALALASGWRILTWGGALAAL
STGGIGLYHAGVEQGWWEGPTTCTSGPIGNLSAEQLMAQILEAPLVRCDDIPWELFGISMAGWNGVISIG
LALIWLLAATRRA
>gi|56696984|ref|YP_167346.1| AsnC family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MDKTDERLIAALRHDARASLSDLALQLDLSRTTVRARIERLVQRGDILGFTITLKEDVLNDPVRGLMMIE
IEGRGAARITRQLQGLKEVRAIHSTNGRWDLIVELGTETLEGLDHALARIRLFEGVQASETSLLLSTKKA
T
>gi|56696985|ref|YP_167347.1| arginase [Ruegeria pomeroyi DSS-3]
MTLLYDQNHHWISTRFDQTLAKTATRPHLMSRKTCILIGAPVDSGKRRTGCLMGPDSYRTAGLAEALADL
GHRVEDLGNLSPAEHAPEPSDTHLHQPNRTIGWTNRLIRAAEQAMPRGLPIFLGGDHALALGSVAGVANH
AARVGRPQFVLWLDAHSDYHTPETSASGNLHGTPLGYVTGRGGFAGFPVIKNPVKQRNICILGLRSVDHA
EREALQRTKIRFHDMRQIDEHGIARPLQAFLDTWAKENGMLHVSLDVDFLDPSIAPAVGTTVPGGATMRE
GHLVMEMICDSGLMTSLDLVELNPFLDERGRTAQLIVDLAASALGRRVFDRPTRSFS
>gi|56696986|ref|YP_167348.1| amidinotransferase family protein [Ruegeria pomeroyi DSS-3]
MTTIQAPMAVVMIRPHAFRPNPETRADNAFQTDSAAADTAARARDEFDRAVTGLRAAGVRVHVFDDTGVL
DTPDSVFPNNWFSTHTGGHVAVYPMYAENRRRERRPDVIELLKREYRVSDVIDYSGLEQDGLALEGTGAM
VLDHIGRIAYVARSHRADPVLLERFCAHFNYEPICFDAVDARGRPVYHTNVLMGIGTEYALICLSMIPDP
ERRRTVAERLAETGRSVIDLSPEQIGAFAGNAIELTGHRRILALSARAHAALTPDQIAVIERSAQLLPLA
IPTIETAGGSVRCMIAGIHLTRRPERTAA
>gi|56696987|ref|YP_167349.1| ornithine cyclodeaminase [Ruegeria pomeroyi DSS-3]
MTATTIPSDKALVPFVSVDHMMQLVHSIGVEEMMRGIADYIEADFRRWESFDKTPRVASHSPVGVIELMP
TSDGELYGFKYVNGHPKNTKEGLQTVTAFGLLASVETGYPVLLSEMTMLTALRTAATSAMVAKYLAPKGA
HTMAMIGNGAQSEFQTLAMKAICGLKSVRLYDIDPAATAKAAHNLASQGIEVVSCASPEEAIEGAQILTT
CTADKQYATILTDNMVGSGVHINAIGGDCPGKTELAEAILHRSDIFVEYPPQTRIEGEIQQLAPEHPVTE
MWQVITGKVPGRSSDRQITLFDSVGFAIEDFSALRYVRDRLQETGLYHALDLLADPDDPRDLFGMLQRAA
PAKG
>gi|56696988|ref|YP_167350.1| alkylphosphonate utilization operon protein PhnA [Ruegeria pomeroyi DSS-3]
MNDTLPPCPDCASSFTYQVDALLNCPECGHEWQATEEAEVGIRDSVGNLLADGDTVTVIKDLKVKGSSAV
VKVGTKVRNIRLVGGDHDIDCKIPGIGPMGLKSQFVKKAAD
>gi|56696989|ref|YP_167351.1| HNH endonuclease family protein [Ruegeria pomeroyi DSS-3]
MDGDFRTDFVREPGALKHHPALVLNADYRPLSYYPLSLWPWQEAIKAAWLDRVDIIAEYDEVVRSPSVVL
RIPSVVVLKDYVKPQKRVAFTRFNLFLRDEFRCQYCGGKGDLTFDHVVPRAAGGVTSWENVVAACAPCNL
RKGSKSLRQANMSLRRPPRRPQAEELQNVGRKFPPNHLHESWMDFLYWDAELDA
>gi|56696990|ref|YP_167352.1| RNA pseudouridylate synthase [Ruegeria pomeroyi DSS-3]
MAWFIRFNKPYDVLSQFTDRGSADSPRATLSDHIDLPGVYPAGRLDRDSEGLMLLTDVGRLQARIADPRH
KLAKTYWVQVEGVPDAAALRALAEGVELKDGLTRPARARAMPEPPGLWPRNPPIRERKSVPDSWIELTIR
EGRNRQVRRMTAAVGHPTLRLIRARIGDWTLDGLVPGEWQSLPMPTTPSPSTSQKQRPRR
>gi|56696991|ref|YP_167353.1| acetyltransferase [Ruegeria pomeroyi DSS-3]
MSDIAVRPIRAEDVPQACAILNRIIEIGGTTAFEQPVSEDEFDAWYVNGADLICCHVALDAAGAVAGFQW
LGRNDSLPEGCGDIASFTRREPVLRGAGRALFACTVAVARDRGLAEINATIRADNALGLAYYGKMGFRDH
VVTPAVPLRDGRPVDRISKRFDLRG
>gi|56696992|ref|YP_167354.1| phospholipase/carboxylesterase family protein [Ruegeria pomeroyi DSS-3]
MTRVLRAERKAPVSGDTRSAVVFVHGYGANGADLLGLADVLGEHLPDTLFVAPDAPETIPGMPFGFQWFP
IPWLDGSSEEEARRGMEAAVADFNAFLDALMVDEDLLPEQVVLFGFSQGTMMSLHVAPRREDPVAGVVAF
SGRLLEPDLLADEVVSRMPVLLVHGDADDVVPPQSLPQAAEALQGAGFKEVYAHVMKGTGHGIAPDGLSV
ALAFMRDKLSL
>gi|56696993|ref|YP_167355.1| DNA-3-methyladenine glycosylase II, putative [Ruegeria pomeroyi DSS-3]
MTVGRIIETPDCVAEGAAWLAESCPRMAHAMTLTGPLPLRRRPDGFAELLSAIVSQQVSVASANAIWARM
RAAGLIGPRKILWASDDDLRAAGLSRQKIRYARELAKARIDFNGLRAAPDADVVAELTRVPGIGVWTAEI
YAMFSLGRADVFAPGDLALQEAARVLYELPERPSERALRQMALAWSPWRSVAARVLWAYYRVAKDREGIR
>gi|56696994|ref|YP_167356.1| transporter, putative [Ruegeria pomeroyi DSS-3]
MTLADSHTNDSRAKRNVVVLVAAQAILGAQMPMIFTIGGLAGQSLASNVCLATLPISLIVLGSMLAATPI
SAIMQKWGRRAGFLLGALAGALGGAVGAYGLYLSSFPVFLAGSLLTGVYMSAHGFYRFAAADTASDAFRP
KAISYVMAGGLAAAIIGPQAVKATSDAYVIPFLGTYYAVIAVNLLGALLFFFLDIPRPTPPAADSPRGRT
RMELLKTPRIAVAVICAMVSYALMNLVMTSTPLAVVGCGYDQGDAADVVTSHVLAMYVPSFFTGHLIARF
GVEKVVAAGLVVLAAAGVVALQGVDLNNFFIALILLGLGWNFGFIGATTMLAGAHEPHERGRMQGLNDLL
VFGGVTMASLASGGLMNCSGGNAVEGWTAVNLAMVPFLTLAGGALIWLTLRPRDA
>gi|56696995|ref|YP_167357.1| hypothetical protein SPO2129 [Ruegeria pomeroyi DSS-3]
MSDAFDADLTACAELVQRADPDRFAAAMAAPVAARRVLFPLYALAVEVARAPWASAEPMIAEMRLQWWRD
ALEELALGKPPRRHSVVTPLAGILSPQMAARLDGFVAVRRWDIYRDPFEDDAHLTRYLEQSSASLLCVCA
TALGQADEDVLRDYGYATGLANWFRAIPELEARGRIPLLDGTPAGIRRLAEAGLDHLSRARAKRSLISPA
ARPALLAGWQSAALLRQVQKHPARVAAGELGLSPFARHLRLSLQAATGRW
>gi|56696996|ref|YP_167358.1| putative alpha-isopropylmalate/homocitrate synthase family transferase [Ruegeria pomeroyi DSS-3]
MTRERLYLYDTTLRDGQQTQGVQFSTPEKLRIASALDSLGIDYIEGGWPGANPTDSAFFDAAPATRARLT
AFGMTKRSGRSAENDDVLAAVMNAGTGTVCLVGKAHDYHVTQALGIELAENTENIRASMAHIVAQGREAL
FDAEHFFDGYRDNPAYALEVCRAALEAGARWIVLCDTNGGAMPADVARVVGEVIAAGIPGDRLGIHCHND
TDQAVACSLAAVIAGARQIQGTLNGLGERCGNANLTSLIPTLLLKEPYASRFETGVSAGALADLTRISRM
LDDILNRVPVKQAPYVGSSAFAHKAGLHASAILKDPSTYEHIDPSLVGNERIIPMSNQAGQSNLRKRLTD
AGLSVPPGDPALGHILERIKAREDEGYSYDTAQASFELLARRELGQMPAFFEVKRYKVTVERRKNKYDRM
VSLSEAVVVVKVDGEKLLSVSESLDDTGSDRGPVNALYKALAKDLGRYSAILSDMRLVDFKVRITQGGTE
AVTRVIIDSEDGKGRRWSTVGVSANIVDASFEALLDAINWKLLRDCAGQGAAAE
>gi|56696997|ref|YP_167359.1| cysteinyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
MTTIKLHNTRTRTKEEFVPIDPDNVRMYVCGPTVYDRAHLGNGRPVVVFDVLYRLLRHVYGADHVTYVRN
FTDVDDKINARAAERGRPIGDITAETTQWFLDDMGALGALEPDHMPRATQYIPQMVAMIEELVAKGHAYE
AEGHVLFAVDSWKEHYGKLSGRSVDDMIAGARVEVAPYKKNPMDFVLWKPSTPDLPGWDSPWGRGRPGWH
IECSAMSYELLGESFDIHGGGNDLMFPHHENEIAQSCCAHPEGHFANFWLHNEMLQVEGKKMSKSLGNFF
TVRDLLDQGIPGEVIRFVFLSTHYRKPMDWTEKKAKEAEATLRKWWRLTAPLDEMEIKPSPQFIDALTDD
LNTPGAIAELHRLAKEKDYAALEAGLEMLGLQETVNFGVASFGFSTSVEVLEAANDLARRWMAYRDAKNF
EEADRLKKSALLAGVDLSVSKEGGIQVPSATINGSPTVDELEALK
>gi|56696998|ref|YP_167360.1| aspartate aminotransferase [Ruegeria pomeroyi DSS-3]
MRLSRRITGLTGGGSDGWDLFLQARRMIAEGIAVTELTIGEHDTRTHSSILDAMDRSARGGHTGYAMVPG
TALLRDTVAARVQERTGQRTTRDNVLITPGGQAALFAAHSAACDPGDTALFVDPYYATYPGTIRGVGALP
RAVIARAEDGFQPRPDVIEAEADGAVSLLINSPNNPTGVVYGRETLEGIAKVCQDRDLWLISDEVYDTQI
WEGAHLSPRALPGMAERTLVVGSMSKSHAMTGSRCGWIVGPEAAISHLITLATHTTYGVPGFVQDAAVFA
LGQGRDLEEEIAAPFRRRRDLAWHILAGQNAVRLSPAQGAMYLMLDIRATGLSGEAFATALLETHHIAVM
PGESFGKAAAGHVRVAMTVADDAFVKALKTLCHFAAQQASGLPEG
>gi|56696999|ref|YP_167361.1| outer membrane protein, putative [Ruegeria pomeroyi DSS-3]
MARSRTMKLLVPALVAVSMAAAPAMAGDWSGAYLGLGVGYGDADGPGARDGEAASFGGHIGYNFDLGNRF
VMGGELEYDRVNNDLGAGGGTLDEIGRLKVKAGYDFGPVLGYGVLGAARATSTFGNENGLVYGLGLAMPV
TDYLSVSGEVLRHQFKDFGGAGNDFDVNTFNLRASLRF
>gi|56697000|ref|YP_167362.1| trimethylamine methyltransferase family protein [Ruegeria pomeroyi DSS-3]
MNDQPRSTARAGGRSARHAARSAALPDHLRPIRPGMSGGALNLLSQQDMERIHSAALDALERIGLADAPQ
SGVDYLVGAGCILGEDKRIRFPRALVEDTLARANRSVTLYSRDGKTDLELAGARVHYGTAGAAVHMVDVM
GREYRDSTVQDLHDAARICERLDNIHFVQRPMVCRDIIDNFEMDMNTIYACCAGTYKHVGVSFTDPSYVA
PAIEMLHMIAGSEANWRERPFVSNSNCFVVPPMKFATESCLVMEECIKHGMPVLLLSAGMAGATAPSTVA
GAIVQAVAECLAGLVYVNAVKPGAPAIFGTWPFGLDLRTGAMTGGSGEQALLTAGCAQMHRFYDLPGGAA
AGIADSKLPDMQAGWEQMCSNVMAGLSGLNMVYEAAGMHASLLGFCHESLILSDDLIGQALRCVRGIEVN
DETLAVDQIAQVCLGGSGHYLGTDQTLGRMQADYVYPALGDRTSPKEWVEKEKPDLIAKAIARKEAILAE
RSAARFDAATDAAIRAKFNIHLPA
>gi|56697001|ref|YP_167363.1| hypothetical protein SPO2135 [Ruegeria pomeroyi DSS-3]
MTPKLLALLGALGMALPATAWAQSSADTDGDGVLTLTEVQAANPEVDPETFVRMDANGDAVLDSEEVAAA
QQAGLLPASDG
>gi|56697002|ref|YP_167364.1| ribonucleotide-diphosphate reductase subunit alpha [Ruegeria pomeroyi DSS-3]
MKIERKFTTAGQDAYADLEFRSATSEIRNPDGTIVFRLDDIEVPTSWSQVASDVIAQKYFRKAGVPSRLK
KVREKGVPEFLWRSVPDSDAEMGGEISSKQVFDRLAGAWCYWGWKGGYFTTEEDARAYFDEMRFMLATQR
AAPNSPQWFNTGLHWAYGIDGPAQGHHYVDYKTGKLTKSDSAYEHPQPHACFIQSVSDDLVNEGGIMDLW
VREARLFKYGSGTGTNFSHLRAEGESLSGGGKSSGLMGFLKIGDRAAGAIKSGGTTRRAAKMVIVDADHP
DIEQFIQWKVLEEQKVASIVAGSKMHEKMLNGIFAAIRAWDGAEVDAYDPAVNEGLKAAIREAKKVAIPE
TYVKRVLDYAKQGHTSIEFPTYDTDWDSEAYNSVSGQNSNNSIRVTNAFLKAVEKDADWELINRVNGKVA
KTVKARDLWEKVGHAAWACADPGIQFHDTVNDWHTCPADGPIRGSNPCSEYMFLDDTACNLASMNLLTFL
KDGEFQAEDYIHATRLWTLTLEISVTMAQFPSKEIAQLSYDFRTLGLGYANIGGLLMNMGYGYDSDEGRA
LCGALTAIMTGVAYATSAEIAGELGPFAGYERNAANMLRVIRNHRTAAYGKANGYEQLSVKPVPLDHSNC
PDPRLVELAMASWDEALSLGEKNGYRNAQSTVIAPTGTIGLVMDCDTTGIEPDFALVKFKKLAGGGYFKI
INRSVPAALENLGYSSAQIEEIVSYAVGHGTIGNAPGINHTSLTGHGFGPNELRKVDAALESAFDIRFVF
NQWTLGEDFCTGVLGIPAAKLNDPTFDLLRHLGFTKKDIDAANDHVCGTMTLEGAPHLSEEHYAIFDCAN
PCGKKGKRFLSVDSHITMMAAAQSFISGAISKTINMPNNATIEDCQKAYELSWSLGVKANALYRDGSKLS
QPLAAALIEDDDEAAEVLETGTPAAKAAVLAEKVIEKVVVKEVIRSHREKLPHRRKGYTQKAIVGGHKVY
LRTGEYQDGSLGEIFIDMHKEGAGFRAMMNNFAIAVSVGLQYGVPLEEFVDAFTFTKFEPAGMVQGNDSI
KNATSILDYVFRELAVSYLDRTDLAHVKPEGATFDDIGKGEEEGLSNVTSVSDSAASKSLEVLKQISSTG
YLRKRLPQDLVVLNGGASIGAVALDTAGDPVAALQTLVPETGSATVAATGMDARTKARMQGYEGEACGEC
GNYTLVRNGTCMKCNTCGATSGCS
>gi|56697003|ref|YP_167365.1| putative lipoprotein [Ruegeria pomeroyi DSS-3]
MKPLFGLLAALLTVASCTQDIAVNSASALYQTRPKALIEGFAAACSEPGETLRRPDPGTWQCWVDLPADM
TAAAILQHDGTLKALPQLVVQLQIAQQADGQFRATLQDYLNVPQTSGAALRIQGNAPGAQEARNGLLRDM
GGHIIGE
>gi|56697004|ref|YP_167366.1| hypothetical protein SPO2139 [Ruegeria pomeroyi DSS-3]
MIRAALCLLVWLTGATALWAETCREDELRLRGSGSELRFTIELAQSPEERAQGLMFRESLPRGAGMLFVF
EHPQRVAFWMKNTLIPLDLIFVDQSGTVTRVHPNAIPHDETPIPGGDAVFAVLEINGGLAARYGIAPGTQ
MQHKVFSDGPAAWPC
>gi|56697005|ref|YP_167367.1| cold shock DNA-binding domain-containing protein [Ruegeria pomeroyi DSS-3]
MAEELSSAYKVRGRVKWFDPTKGYGFVVAEEGGPDILLHVNVLRNFGQSSVADGAAIEIMTHRTDRGVQA
VEVVSIVPPERPETVLLSDFAEMDPEAIRAAPLEPARVKWFDKGKGFGFANVFGSSEDVFLHIEVLRQSG
LSDLQPGEALAMRVIDGKRGRMAAEVLAWEAALNL
>gi|56697006|ref|YP_167368.1| pyridoxamine 5''-phosphate oxidase, putative [Ruegeria pomeroyi DSS-3]
MQLFKGMDMSDRTGIFAGDDPFAIARDWLAEAERSEPNDANAIALATVDASGLPNVRMVLLKEIEPAAFV
FYTNYESAKAIELEQAGKAAFVMHWKSLRRQLRVRGTITREEGPQADDYYASRSLKSRLGAWASRQSRPL
SSRAALMAEVAKITAAKGPNPPRPPFWGGFRLTPVEIEFWADGAFRLHDRFVWRRNSAGESWVIQRLNP
>gi|56697007|ref|YP_167369.1| enoyl-(acyl carrier protein) reductase [Ruegeria pomeroyi DSS-3]
MSNQLMAGKRGLIMGLANDKSIAWGIARALADAGAELAFSYQGDALKKRVDPLAAQLGSEIVLPCDVGDE
ASIDTLFDALEQKWGKLDFVVHAIGFSDKNELRGRYVDTSRANFKLTMDISVFSFTAVMKRAEKLMSEGG
SAITLTYYGAEQVMPHYNVMGVAKAALEASVKYLAEDLGKDGIRVNSVSAGPIKTLAASGIGDFRYIMKW
NEYNSPLRRNVTIDDVGKSALYLLSDLSSGVTGENLHVDSGYHIVGMKAVDAPDIDKG
>gi|56697008|ref|YP_167370.1| xanthine-guanine phosphoribosyltransferase [Ruegeria pomeroyi DSS-3]
MSTKDPHRLPHEKGFHISWDQIHRDSRALAWRLDGQGPDEGAWRAVVAITRGGMAPAMIVSRELDIRTVD
TISVKSYHHQAQGQAQVLKAPDAGLMGDGTGILVIDDLVDSGKTLELVREMYPNAHFATVYAKPKGRPMV
DTFITEVSQDTWIFFPWDMALQYVEPYRGTD
>gi|56697009|ref|YP_167371.1| hypothetical protein SPO2144 [Ruegeria pomeroyi DSS-3]
MAPTRTATTFAPPVMEARRWLEGVTFSPDRPLINVSQAAPVEPPPQALRQAMADFALTEDSAHLYGPVLG
NADLRAELAAQISHHYGGAVRPEQVAITSGCNQAFAATISAITGEGDEVILPTPWYFNHKMWLDMEGVTA
VPLATGPDLLPDVEAARALITPRTRAIALVTPNNPGGVEYPAELVGAFYDLAAEHGLRLLLDETYRDFDS
RSGAPHDLFTRPDWDKTLVHLYSFSKAYRLTGHRVGALASDTGLLAEIEKFLDTVAICPGQIGQHAALWG
MRNLGQWVAGERDEILDRRAAIAEGMPALVAEGWTLLGLGAYFAYLEHPFDLPSDELARRLVRDAGVLVL
PGTMFMPEGDLAGARQLRVAFANLDRAGIGQLFDRLKGLRF
>gi|56697010|ref|YP_167372.1| hypothetical protein SPO2145 [Ruegeria pomeroyi DSS-3]
MSAGVKSLSKTFVWILMGLLIAGLAGFGAVNLSGTVRTVAQVGEQTVSVDAYARELQREIRGIEAQTGQP
LQMSQVRDLGIDQAVLARLVAIAALDNEVAGLGISIGDENLSREIVQIPAFQGVDGKFDPEGYRYALDNA
GLSEAEFEADLRRESARTLVQGAIMEGLVMPDTYADTLAQFVGARRSFTMATVDTGALDSPVAAPDAAQI
EAFYADNQDQFMLPRSKRLTYALLTPEMLLDRVELDEGAVRRLYEERESSYQQPERRLVERLVFADQASA
ESAMAQVEVGGATFELLVEGRGLSLTDVDMGDLTAQDLGAAAEAVFAAEVGDVVGPLPSDLGPALFRVNG
TLDARITTFESVEAELRDELAGERARRLIEAQAESLNDMLAGGATLEELAQDTDMELGQIDWTEDSSDGV
AAYAGFRAVATEVAEGDFPEIGFLEDGAVFALRLDEELEPRPEPLDSARERVIAAWTAAETRRALQDKAA
SVATGLATDGDFTATGLPHRVENGLTRTAFIDGTPFDFMEQVFAMQPGDLKVIAGDDAAFIVRLEEELPP
ADTDELTQMKRALSAQMTQALAQNLFDIYVRDAQTRAQPTLDQRALNAVQASFQ
>gi|56697011|ref|YP_167373.1| anthranilate synthase component I [Ruegeria pomeroyi DSS-3]
MALTPDFETFARAYEAGENQVVHTRLAADLDTPVSLMLKLTGAQKDAFMLESVTGGEVRGRYSIIGMKPD
LIWRCHGEQSALNRKARFDPDGFRPQEGNPLDNLRALLAESRIALPEDLPQASAGLFGYLGYDMVRLVEH
LPDVNPDPLGLPDAVMMRPSVVAVLDGVKGEVTVVSPAWVSDGQSARAAYAQAAERVMDAVRDLERAMPA
ETRDLGEAHEVAPPVSNFTREGYKAAVEKAKDYIRAGDIFQVVPAQRWTQEFPLPPFALYRSLRRTNPSP
FMFYFNFGGFQVVGASPEILVRVFGQEVTIRPIAGTRPRGATPEEDRANEADLLADKKELAEHLMLLDLG
RNDAGRVSKIGTVRPTEKFIIERYSHVMHIVSNVVGELDPDKDALDAFFAGMPAGTVSGAPKVRAMEIID
ELEPEKRGIYGGGVGYFSAGGDMDMCIALRTAIVKDRKLYIQAGGGVVYDSDPEAEFMETVHKSNAIRRA
AADAARFIGSRNS
>gi|56697012|ref|YP_167374.1| hypothetical protein SPO2147 [Ruegeria pomeroyi DSS-3]
MRPLDPHALPPVPWKNGGGVTREIAGVPGRWRVSLAEVSAEGPFSLFPRQMRILTVVHGSGMELHTEEQV
LKARSGAPLSFSGDLPVIGKLPNGPVHNLNLIFDPRQVSGALAAHAGTRTVPADPDEVSLYLLQGTARCE
NVSLSAGQMLLKRKMPLDLGLEAVALCVSISRRS
>gi|56697013|ref|YP_167375.1| hypothetical protein SPO2148 [Ruegeria pomeroyi DSS-3]
MGGFIGGLLAGAVLVLAAAAWLSLTTPLPQRPEVAATPAAAEPSAEPAEQGGIASPGRDADLVELAPRQP
EAAPGAETLGALDEADRQPAGKPQVGGATETIARPEGSDSAAVQVPGTGSGVTQLQLASPAAPQDRAEPE
VNTEAPAQPSAPETGVTAEVTAPSLPDSTPAVPETATDAQPAQESASVAEAPATDTAPVPDTATAAPEAP
QEEEKPRIAALPQIGGAEEGAAPRVGTPVVPLTERDSAVAEAPAEGGPRPIEAYAATFDNPEDKPLMSIV
LIDDAEGLGSEALRDFPYPLTFALDPADPQAAEKMARHRAAGVEVMLIADLPAAASAQDAEVSMAVWLKA
LPETVGILEGTGTGIQGNRALSDQVTAIVGGSGRGLLTQDNGLNTVQKLAARDGVPSAVVFRDFDGAGQS
PTVMRRFLDQAAFRAGQEGAVVMLGRLRPDTISALLLWGLQDRASRVALAPVSAVLTRDPG
>gi|56697014|ref|YP_167376.1| anthranilate synthase component II [Ruegeria pomeroyi DSS-3]
MLLLIDNYDSFTYNLVHYLGELGAEIEVRRNDALNVQEAMAMNPAGILLSPGPCDPDQAGICLALTEAAA
ETRTPLLGVCLGHQTIGQAFGGKVVRCHEIVHGKMGQMHHSAKGLFAGLPSPFEATRYHSLVVERDSLPD
CLEVTAWLEDGTIMGLQHKELPIHGVQFHPESIASEHGHALLRNFLDVMKVPA
>gi|56697015|ref|YP_167377.1| anthranilate phosphoribosyltransferase [Ruegeria pomeroyi DSS-3]
MSDALKPLIGAAADRPLTRAEAEQAFTILFDGEATPSQIGGLLMALRTRGETVDEYAAAAAVMRAKCNAV
RAPEGAMDIVGTGGDGKNTLNISTATAFVVAGAGVVVAKHGNRNLSSKSGTADLQGQMGINVMVGPQVVE
KALNEAGIGFMMAPMHHPATAHVMPTRAELGTRTIFNILGPLTNPAGVKRQLTGAFTRALIRPMAETLGL
LGSERAWLVHGSDGTDELTITGVSWVAALEDGTVKEVELHPEDAGLPVHPFEAIIGGTPEENATAFRALL
DGAPSAYRDAVLLNAAAALVVADRAADLREGVALAAQSIDSGQARAKVEALSRITQDAR
>gi|56697016|ref|YP_167378.1| indole-3-glycerol-phosphate synthase [Ruegeria pomeroyi DSS-3]
MTDTILDKIKAYKLEEVAADKAAKPLEAVEAEAREADPVRGFADALIAATRQGYGLIAEIKKASPSKGLI
RPDFDPPALARAYAEGGATCLSVLTDTPSFQGAKSYLTAARAACDLPALRKDFMYDPYQVVEARALGADC
ILIIMASVDDAQAEELEQTAFDWGMDVLIEVHDAEELERAERLKSPLIGINNRNLKTFETTLDTTRKLSK
LVPPDRIIVCESGLNTPADLSDMARHGARCFLIGESLMRQDDVTGATRTLLADPLMPGAM
>gi|56697017|ref|YP_167379.1| molybdenum cofactor biosynthesis protein C [Ruegeria pomeroyi DSS-3]
MSLTHFDAKGDAHMVDVTDKAVTDRVAVAEGYISMTSQTFDIVSEGRAKKGDVLGVARLAGIMGAKKTPD
LIPLCHPLPLTKVAVELTLDPELPGVRIAATVRTTGQTGVEMEALTAVSTAALTVYDMVKAVDKAMQIGG
IRVTLKDGGKSGRYEAT
>gi|56697018|ref|YP_167380.1| molybdenum cofactor biosynthesis protein A [Ruegeria pomeroyi DSS-3]
MITVEEARSLLLDLVEPLGAEEAPLAESAGRVLARDVAATRDQPPFAAASMDGYAVKSAEVERHAMFKVI
GEAAAGHRFDGQVGPGQAVRIFTGAPVPDGADFVVIQEDVSRSGDLITITDAPGDKTNIRPAGVDFRIGQ
TLSAPRVLRPEEVALLASMNIPRVPVRRQPVVALISTGDELVMPGETPGPDQIIASNTFGLKALFEANGA
RVRVLPIARDTRAALVTAFELARGADLVITIGGASVGDHDLVAQVAGELGMEQSFYKVRMRPGKPLMAGR
IGGMPMVGLPGNPVSAMVCGYIFILPMLRRMLDLDPEIALREAVLSAPLGPNGPREHYMRAQVENGQIAT
FGDQDSSLLSILAQANALLMRPPEDSARAIGERVRYLPI
>gi|56697019|ref|YP_167381.1| LexA repressor [Ruegeria pomeroyi DSS-3]
MLTKKQLDLLEFIHKRLQADGVPPSFDEMKLALDLRSKSGIHRLITALEERGFIRRLAHRARAIEIVKLP
ESLGGEPTVGFQPRVIDGDRPDRPRPANAEPVTIHAVELPVMGRIAAGVPIEAISQVSHQVAVPGSMVGK
GEHYALEVKGDSMIEAGINDGDVVVIRETSTADNGDIVVALVDDSEATLKRFFRRGASIALEAANPAYET
RVLPSDRVRVQGRLVGLIRTY
>gi|56697020|ref|YP_167382.1| competence protein [Ruegeria pomeroyi DSS-3]
MRVLPRIEAALLAQRGHLFPWVPVFLALGIGFYFLLRVEPGLTHYALAAGFALLVGALAWARPGAFSPLG
WALALIAAGFVLAGARAHQVAAPVIEGRYYGPVEGRVVALDRSASDKLRVTLDQVRLDRWMPTGPPRHVR
ISLHGDERVPEPGSRIMTTAYLSPPQGPVEPGGFDFRRHAWFQGLGAIGYTRVPVLLARPPDRSERDMSV
FTLRMAASAHIRARLPGDVGGFAAAVTTGDRSGVSQGALDALRASNLAHLLAISGLHMGLLAGFVFTALR
VALSLIPPLALRLPVRKLAALGALAVAAGYLALSGGNVATQRAFVMVAVMLCAVLVDRRALSMRAVAMAA
LIVLVLRPEALLGPGFQMSFAATVALVAVFGWLREAEIGLGPRWLNPVAGVVISSAVAGLATAPIGAAHF
NTLAHYGLVANLMSVPLMGLVVIPAAVLALVLAPLGLDWIGLEVMGLGLRWILGVADWVAGMDGARGYVM
RPDWVVLPILTLGALWLVLWRGRARLAGVPVMAAAFWLWSGAERPGVLIADTGGLVGVMTETGRALSKPR
GAGFIAGVWLENDGDGADQMAAAARWPGEDMLRKIRVGEVEIVHVTGKRAAQGLSDCDRAQLIVSAVPLA
VNGPCEVYDPKRLALTGALSIGPKGVESAAHLSGRRLWNGAARPVQ
>gi|56697021|ref|YP_167383.1| glutamyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
MPDQVVTRFAPSPTGFLHIGGARTALFNWLYARGRGGKFLLRIEDTDRARSTPEATAAILQGMAWLGLDH
DGEVISQFERAPRHAEVALELLAQGKAYKCFSTQDEIQAFREAAQAEKRSTLFRSPWRDADPATHPDAPY
VIRIKAPQSGETVIRDQVQGDVTIRNDQLDDMVLLRSDGTPVYMLAVVVDDHDMGVTHVIRGDDHLNNAA
RQMMIYQAMGWEVPVWAHIPLIHGPDGKKLSKRHGALGAQEYQAMGYPAAGMRNYLARLGWSHGDDEFFT
DAQAREWFDLDGIGKSPARFDLKKLENLSGQHIAVSDDAALRHEIEAYLAAAGLPALTQTQSGDLERAMY
CLKDRARTFPELIEKAAFVLASRPISPDEKAAAALASVSDGILAELTPQLQNASWTRESLEEALNAFAEA
HGTKFGKLAAPLRAALAGRAVTPSVFDMMLVLGRDESLARLRDAAHPA
>gi|56697022|ref|YP_167384.1| citrate synthase I [Ruegeria pomeroyi DSS-3]
MTEEKKTATLSLNGQSYDLPVYSPSAGPDVIDIRKLYGQAGVFTYDPGFTSTASCDSTITYIDGELGELL
HRGYPIDQLAAKSHYLEVCYLLLYGELPTAAALEKFETTITRHTMIHEQMHYFFRGFRRDAHPMATMVGV
VGAMSAFYHDSTDIADPHQREIASHRLIAKMPTIAAMAYKYSIGQPFMYPRNDLDYAANFLQMCFAVPAE
HYHVDPILARAMDRIFTLHADHEQNASTSTVRLASSSGANPFACIAAGIACLWGPAHGGANQACLEMLKE
IGSPDRIPEFIARAKDKNDPFRLMGFGHRVYKNFDPRATVMKQSADEVLDLLGVENNPILATAKELERAA
LADDYFAEKKLFPNVDFYSGIILEAMGFPTSMFTPIFAVSRTVGWVSQWKEQLADPQHKIGRPRQLYLGS
TARDYVDIEDR
>gi|56697023|ref|YP_167385.1| hypothetical protein SPO2158 [Ruegeria pomeroyi DSS-3]
MTGTIGEKTEITVTLGCEPRLLVTIVEKPDGGLFIDIKSEDPSAEVGDLDGFFFNFNDDATLDGLNIWPA
ENEGTQWSPVTDVQMNPDAVDSLSNGAQLAESYDAGIQFGTTADSTEGYVSAANFTMWSENGPLSISDID
LDSLAAVVDSDTGNGIVKTVSDSTGETEDPDGEHDEDECAFVIEGPVNTEVVLTQLENGDIRVDLEVLEG
DDPDATGQIGDITGLFFNVGDDSLLDGMTVSGEDVTGSQFAAGSVNDLGNGANMEGAQEGETGETANGFD
AGIAIGKNGIGHGDDIRATSFTLSHPDGLSLEDFSGEYFGLRLTSVGDEDSDDREGSLKLIGQCEDEPQP
PICDDQYYLNDVMALMTQPMHDELAYEMMASDPVEEVDLVETY
>gi|56697024|ref|YP_167386.1| radical SAM domain-containing protein [Ruegeria pomeroyi DSS-3]
MLHITAAKARAGGQIGGVFCLAQCSLNVLVSGMQTQPLPPLISARPVGRGARSNDAGRFEPLERVAEHDG
WEREEELPPLRTQVSLETARSLISYNRSPDLPFDRSINPYRGCEHGCSYCFARPSHAYLGLSPGLDFETR
LVARPNAAEVLRAELSARRYKVAPIAIGTNTDPYQPLEKTHAITRACLQVLAEFNHPVAIVTRGALIERD
LDILAPMAARGLVRVGISLTTLDAALARRMEPRAPSPKRRLAMIRALNGAGVPVRVMTSPLIPGLTDHEL
ESLLAAGAEAGADTASWIMLRLPREVSPLWQEWLAEHAPARAAKVMARLREMHGGRDYDPRWGHRMRGEG
EYAQMIAKRFRAACKRIGLAQEAPALRCDLFRVPPQPGDQLSLF
>gi|56697025|ref|YP_167387.1| corrinoid methyltransferase protein, putative [Ruegeria pomeroyi DSS-3]
MSEEEDIILSELDDEELVQQMFDDLYDGLKEEIEEGVNILIERGWVPYDVLTKALVGGMTIVGADFRDGI
LFVPEVLLAANAMKGGMAILKPLLAETGAPRVGKMVIGTVKGDIHDIGKNLVSMMMEGAGFEVVDLGINN
PVENYLEALEKEEPDILGMSALLTTTMPYMKVVIDTLIEQGKRDDYIVLVGGAPLNEEFGKAIGADAYCR
DAAVAVETAKDWVGRKHNRMAG
>gi|56697026|ref|YP_167388.1| hypothetical protein SPO2161 [Ruegeria pomeroyi DSS-3]
MPTTFTALFLGNLADIDTFEGNNSAESAGALVGLTFGSIADPLVDSAVTWSAVGDPGSFFDMDNNPAEQF
SIDGGPAQTFDGTAVYDATITYTDGSTATITAVLAQDVNGNTYLVPEFSANADQAALEAGIIQSLTLDAV
TGGGANYSGLTANRQDWQLVTCFTPGTIIDTEDGPRLIEELQPGDLIRTLDHGDQPLRWIGRTTVRATGA
FAPVLIRAGALDNRRDLIVSPQHRMLIEGWRAELITGHSQALVAAKHLVNARDILIAPGGEVTYIHLLFD
RHEIIWAEGCPTESFHPGQMGWSGLEQAARDEILSLFPELATTGMQSFGPLARPAIRQHEALLSVT
>gi|56697027|ref|YP_167389.1| hypothetical protein SPO2162 [Ruegeria pomeroyi DSS-3]
MNMLPDDAQLTRSGLSLSSGDARILLIACGALAREILALRDRNGWTHMDLTCLPAILHVYPERITAAVEE
AVARHRDSYQRIFVVYADCGTGGLLEAACERLGVEMVKGPHCYSFFEGNARFAEVSEDEITAFYLTDFLV
RQFDAFVWKPMGFDRHPDLIPMMFGNYTKLVYQAQTDDPALTEKARTCAERLGLAFERRFTGYGDLETTM
AGWADKATRG
>gi|56697029|ref|YP_167390.1| hypothetical protein SPO2163 [Ruegeria pomeroyi DSS-3]
MPTLYYSPHTRSSRVIAQLMLIGKLDQVEVVTVDVVRHDGSGRHDPSNPHPEGKVPYLVTDDGTGIRESA
AIMMYLDELFGQPLSPAIGAPGRGAYLSWMAYSGGVLEPVLVAAFAGLDHPAIIETFRGMGELSAVLEQG
AQKGPFLLGAELSVADILLASPFQWAPHLLPDSPAIKAWVDRVDSRLDGAAIAAYEASAMAQLTAQETA
>gi|56697028|ref|YP_167391.1| hypothetical protein SPO2164 [Ruegeria pomeroyi DSS-3]
MPKTDRLFRLLHLIRGLRPPVTAARLASAMEVSERTIYRDIDSLRAAGARIEGEAGVGYTMVEDPALPPQ
TFTRIEIEALTLGLADVTQRGDADLARAASDALVKILATLPERQQRQAMHAVNMAQRLITPATPTIDMTL
LREAMWAEEALDIGYRDLKQERTRRRIYPLALSYHDRSVMLLAWCCKRQDFRSFHVTRIEGYEKTQQSFR
PRRVTLLRDYVEKLRARDQACLDGLA
>gi|56697030|ref|YP_167392.1| Fe-S metabolism associated family protein [Ruegeria pomeroyi DSS-3]
MASPAFEEIVEDFEFLDDWEDRYRHVIEQGKLMDPLDEALKVPATRVHGCASQVWLHPVIEGGVFRFDGD
SDAMIVRGLIAVLRALYNGVPVAEVARIDARAELARLGLNDHLSAQRSNGLRAMIERIRMVAAEAA
>gi|56697031|ref|YP_167393.1| putative lipoprotein [Ruegeria pomeroyi DSS-3]
MLKPLIALVTAGSVLTACGGWRDSRVNPSNWFGPSTPAPIEATAGEETNPLIPRNSGKGLFARPDPEDRS
ILITQVTELKVEPTTTGAIISVVGVANRQGGFDTELRPIVTPENTEAGILAYGFRVVYPEDATPQGPVQT
RTIREAVSVSRQDLAGIKVIRVEAKDGALETRRR
>gi|56697032|ref|YP_167394.1| ribonuclease D [Ruegeria pomeroyi DSS-3]
MKTLTTTPELAAFCKAAASHAYVTVDTEFLRERTYYSKLCLIQLAYPGEDADSAVLVDPLAEGLELEPLY
TLFRDTSVVKVFHAARQDLEIFWVDAGVFPEPLFDTQVAAMVCGFGEQVGYETLVRKICRQGLDKTSRFT
DWSRRPLSDAQKTYALADVTHLRQIYEHLAADLAKTGRSHWVAEELRTLTDPATYDIRPEEAWRRIKTRT
NSGKFLAVVRELAQFRESYAQDNNVPRNRVFKDDALIELASTKPRTHADLGGSRLLLREARKGAIADGIL
AAVGRGIDCPPEKMPKATNGRENLQVNPALADLLRVLLKAKTETVGVAAKLIANSAELDLIAAGERDVPS
LTGWRLEVFGADALRLCQGEIGLAAKGQNVEVVTL
>gi|56697033|ref|YP_167395.1| phosphoribosylglycinamide formyltransferase [Ruegeria pomeroyi DSS-3]
MSAKRVAILISGSGSNMVTLVDSMTGDHPARPCLVLSNDANAGGLAKAAARGVPTAVVDHRPYGKNRAAF
EAELVKPILEAGADIVCLAGFMRVLTAGFTDRFQGRMLNIHPSLLPKYKGLHTHARALAAGDTEHGCTVH
EVTSELDDGPILGQARVAVEPGDTPETLAARVLTWEHKLYPAVLRRFAGGDRRPVWLP
>gi|56697034|ref|YP_167396.1| phosphoribosylaminoimidazole synthetase [Ruegeria pomeroyi DSS-3]
MTSGKNGITYAEAGVDIDAGNALVDRIKPAAKRTNRPGVASGLGGFGALFDLKAAGYQDPVLVAATDGVG
TKLRIAIDTGLVDGVGIDLVAMCVNDLVCQGAEPLFFLDYFATGKLETDTAARIIEGIAEGCVQSGCALI
GGETAEMPGMYPAGDFDLAGFAVGAMERGTALPEGVVEGDVLLGLASNGVHSNGYSLVRKLVEISGNTWE
SDCPFGDGKLGQALLTPTRLYVRQVLAAIRAGGVHALAHITGGGLTENLPRVLPEGMGATIDLDTWDLPP
VFGWMAETGGIAEAEMLKTFNCGIGMIVVCAADRAEALAELLSAEGETVARIGTVTTTPGIAYTGKLL
>gi|56697035|ref|YP_167397.1| metallo-beta-lactamase family protein [Ruegeria pomeroyi DSS-3]
MEFLMTINRRAFLSTLAAAPVLSLGGGAVARAEVTEAGEITHGFALGDARVTVLLDGHLPVGTQLINGYD
EARAQQVLAQGLHRMQDNALTIPVNGYLVERGGRRVLIDTGTAQLMGPGLGALHAGLAAAGVAPETIDTI
LLTHMHPDHAGGLLAADGTAAFANAELVVAQREWDFWHDDAILASVPEGSRGFFDIARRAVAPYADRLRL
LAGEGEAAPGFAALDLPGHTPGHTGFMLDAGGEGLLFWGDLIHSTALQFAEPGWTIAFDADTAQTVTTRR
RMLDRAVADNLLVTGAHLDFPALGRVLRQGAAYAWQPAPWQFGL
>gi|56697036|ref|YP_167398.1| LysR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MDRLTLLETFAIALDEGSLNRAARRRGITQSAVSQQIKQLETSIGQQLLHRTARGIHATRAGDLVYVHAQ
TLLSGYNRMTAELDQLENSVSGTFRISVSSFLGRSVIGPMLIEMNAAHPDLNIVMRLEDRLVDVVREGYD
LAIRTGRLGDTDGFGRKISALDTVLVATPAYLDRVGRPAQPEDMKRLDFIQHHEDQTKGFFPLRRDGREY
PAPVRVGFTADDPDLIMRAVASGSGYTRVPRFMVADEIASGALEVVLPAYRPPNKDVFAVYPSRHTPDRR
RDLTIENVVARFEALRDPQAGPDAITA
>gi|56697037|ref|YP_167399.1| sensor histidine kinase [Ruegeria pomeroyi DSS-3]
MTFRWLKHYMPRSLYARAAIIIVVPVIAVQIVVSVVFLQRHLEDVTTQMTLTAVREVELIMGELTEPATQ
GEVQAQLRPVLGALQVSLRFVNDGTVPMADLRPWYDYTGRQVQRILRGRLADVLAVELPDSRMVRLYLGS
ALGPVELIFDRRRMSPAAPHQLIVTMVAFGLLMTAIAFLYMRNQLRPVKRLADAAQAFGRGHMVSYTPSG
AIEVRAAGSAFLDMRARIERQIEQRTLMLSGVSHDLRTPLTRLKLGLAMIDEEDAAPMLQDVAEMQQMLD
AFLDFSRGVSESAPEKVDPVALLKQVVEDARRADRDVALVACEAEEGDIVTLRPMAVRRAVENLIANAVR
YGSRAEVSLAVTPKFLRIRVEDDGPGIPADKRAEAVKPFQRLDAARNQNQGGGVGLGLAIVADIARAHGG
ALRLGDSERMGGLCADIVIGR
>gi|56697038|ref|YP_167400.1| metallo-beta-lactamase family protein [Ruegeria pomeroyi DSS-3]
MSQAPDDFDPPIGTPIELEAGIRRIVAPNPSPMTYRGTNTYLLGTRELAVIDPGPMSEAHLEAILAALGP
GESISHIVVTHTHLDHSPLARPLAERTGAPVLAFGGPEAGRSAVMRALSAQGLAGGGEGIDTGFVPDRTV
SDGERIEGDGWQLEVIHTPGHLGNHIALAWQDVCFTADHVMGWASSLVSPPDGDLTDFMTACRDLRARDW
RLFHPGHGAQVSAPGARLDWLITHRMGREAAILGALADGPATAEALARRIYTETPAALLPAATRNVFAHL
VDLTGRSRVAPEQTLSATARFHRLS
>gi|56697039|ref|YP_167401.1| hypothetical protein SPO2176 [Ruegeria pomeroyi DSS-3]
MARWPVQHGPDMQQPKPEPISAPPRQQLSQLRDIAILLALAVLALYAGAGFLIPLALAFLVYVLVTAISD
RVHAATGAPEWLTTLAGIIVVLAGLFLMIAVIGGQATQFARAMASYENAFDQAVTRVAALLGEQITAFLR
DNLIGIDLSALTRSAMGSATSLLNTFLLVSLYVAFLLVERRVLGIKLLLAARDPQLGRDMSQVMEAISHN
LQSYLGVKTFVSLLTAGISYVVFTLLGLEFAETWAVLTFALNFIPSIGSIVAVIFPALVSLVQFDTITPF
LVIVFFCGTVQFLIGNFLDPALLGRSLNMSTFMVILALTFWTAVWGLIGAFLSVPLTVCLLIVFRHVPAL
RPVAVLMSKDGHPEAQDSDA
>gi|56697040|ref|YP_167402.1| acetoin utilization protein AcuC [Ruegeria pomeroyi DSS-3]
MFIGSEIYRRSTYGAVHPLAIPRVSTVIDLCRAMGWFAPGQYRTSPRARPAALRAFHTPDYIAALQQAEA
EQAVSEETRARHGLGTLPNPVFAEMYRRPATAAGGSLLAAELVARGHRVFNPGGGTHHGFADRAGGFCYL
NDPVLAILALQRLGCARVAYVDIDAHHCDGVASAFQGSQTVRMISIHEARRWPFTGALEDDAGGAALNLP
VARDLNDSAYALILDRLILPAVAGFRPDAVVLQCGADAVAEDPLSRLALSNCAHRDTVRALAALCPRLLV
LGGGGYNPWSVARAWTGVWATLSGAEIPDRLPPEAEAVLRALSWQRQRHAPRPETWFTTLADAPRPGPIP
SGLRTDLARLEQRLRAEV
>gi|56697041|ref|YP_167403.1| cardiolipin synthetase [Ruegeria pomeroyi DSS-3]
MWAALLSLIVFCLYGAAIVCAVQAARTARTPQGAVGWVVFLLTLPWASVPLYMFLGHHRFHGYRIARRES
ERVVAGLRAHADATAPDPDRVMVNTRPFEKIAHMAVSRGNGARLLVDGEATFAALFAALDAARHYVLIQF
YIVRDDDLGLELRDRLIAAAQRGVKVRFLTDAIGSYGLSDNYIEDLRAAGIDIANPRKQRGPNTRFQVNY
RNHRKTVVVDGQTGFIGGHNVGVEYLGQDPVMGRWRDTHVQITGPSVLQLQLVFAEDWHWARGEDLLDLL
SWETRLDPQDADALIVATGPGDRTESGAMMFFAAITAAERRCWIASPYFVPDLDILAALKHAALRGVDVR
LLVPDEADHTIPWLAAFAYFDEVREAGVRVMRYTDGFLHQKVFVVDDTIAAVGTTNLDNRSFRLNFEAMA
LFFDATVAGQVTAMLEHDFASSTELTRSLAAQPVFIRYGAPLARLFAPIL
>gi|56697042|ref|YP_167404.1| hypothetical protein SPO2179 [Ruegeria pomeroyi DSS-3]
MTLLQQIMWGSLYLGLCFVVEVLLLVWCTLVIVHLSIRLRHLSRAMRTAAVISVSLAFIVLAHTLQVWLW
AGVWIWSDVLTDWNEALYFSLVTYTTLGYGDIVLGPGLRIFAAFAAVAGLLAFGLSTAYLVALMSRVFEG
RLPR
>gi|56697044|ref|YP_167405.1| hypothetical protein SPO2180 [Ruegeria pomeroyi DSS-3]
MFRLSILLIALSAAPALAQDRAALCHERAQKQAGIRDTEWSQGRTTLRIGGSVGVGVSRSSGPATQGAPA
YAGSAASERFEEKRRKKIYTRTYNDCMAQTR
>gi|56697043|ref|YP_167406.1| ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MGIRRGNCNRCPAANGGNRGLGLDSGGGRAILCPVTAPITALRPRAMLLTVDTVSKTYPGGRPVLRGASI
TLDRGQSLALTGESGSGKSTLLNLTGALDGFDSGEITLDGVALSQLDDAGRAALRRDRVALVFQQFNLIP
ALSVAQNLAFQARLAGRLDRGWIDEITARLGLTELTGRYPEQLSGGQQQRVAIGRAMAGRPKLLLADEPT
GNLDETAAGTVLDLMLELVRDSGTALLLVTHSQAIAARLDRRAHLTGGRVAA
>gi|56697045|ref|YP_167407.1| permease, putative [Ruegeria pomeroyi DSS-3]
MIGAALLALGSHWRRHPVQLVTLLLGVALATGLWSAVQAINAEARASYARAADQIGAGGLDRLRRVDGAA
MGLEQYLVLRRAGWQVAAVLEGEMRLGLRAIAVTGIDLLAYPDLPAIAESAAAAEIAPVEALTAPGRLFA
APALALALQGEPGLPPVVETSALPPDTVLTDIGTAETLLDRPGQISHLLVLPGQPLRRAPLAEIAPELIR
QPASGAQDIGRLTVSFHLNLTAFGLLSFVVGLFIVHGAVGLAFEQRRGLIRTLRALGLPLRLLTRLLLAE
LCLLALLGGAAGLVLGYVVAAALLPDVAATLRGLYGAPVSGVLELRPVWLLSGLGMAVAGTLLASAQALW
RLARLPILAAPGQRAWGSGRLRAPTQLLLALALLLTGLAGFAVSGGLIGGFVLLGAVLMAAALALPPVLS
ALLALGGARARGPVAEWLWSDMRAQLPGLSLALMALLLALAANIGVGTMVASFRLTFDGWLDQRLTSTLY
VTARDDAQGAALADWLEPRSDAVLPIRSVEVQQAGTPLFIYGIVDHPSYRAHWPLIARSPQDWDRVMRGE
AALINEQMARRDGLWPGDRVELAPGWTLPVAAVYSDYGNPTGQAIVALKQLLQRYPGTPDTRFGVHLASE
RADALADEIATTFDLPAGAVIHQEALKARSRAIFEKTFLVTGALNILTLGVAGFAILTSLLTLWTQRLPQ
LAPVWALGLTRARLARLELARAVALAAMTALLALPLGLVLAWLLLAVINVAAFGWRLPMYLFPLDWLRLI
GLALATGALAAALPALRLYRLPPAQLLRVFANER
>gi|56697046|ref|YP_167408.1| hypothetical protein SPO2183 [Ruegeria pomeroyi DSS-3]
MPMNVRLLVLLLLWPWTALAQGFAGLGTEADGFAVPERGHSPAFPTDHGPHPEFRIEWWYLTATLTGADG
RDYGLQWTLFRSALKPGEAPGWNSPQLWMGHAAVTTPDSHLFAERLSRGGIGQAGAVAAPFRAWIDEWEM
AGDMGGDMVLRAGGSDFAYHLTMRAKGPLVLHGEGGYSVKSAAGQASYYYSQPFLQVTGNLTLPEGEMSV
TGQAWIDREWSSQPLAEDQSGWDWFSLVLDDGSRVMAFRLRGSSDFTSGTWIGADGQATALPDGSIQAEP
LASAPSGAGPEVPVRWRLAIPARGLDVTVEALNPQAWMGTSFAYWEGPVRVSGSHAGRGYLEMTGYGAE
>gi|56697047|ref|YP_167409.1| hypothetical protein SPO2184 [Ruegeria pomeroyi DSS-3]
MTDIRADLGEAPILANEDEIIADIIQANLKMMEVEENGFKWRAQHPKGHGAIPARFIVGPDVPQAFRVGL
FAQPGAYDALIRFSNGTERRDDPKGGDAHGMAIKLFGVPGARVEGAADAKGTLDFVLVDNETFFEGDLNE
YSAFNDLVSEVLNFKRNGDEALAAIVNGIYLKFLKKYFSHDIYAVAQKFGDQLPTSPLRAIYWSTTPFLH
GDIAVKHRAVPDPVPAPGELREGVEGADGLTDQLLDGLNGKAAAFDFYIQPQEDVAAHPIEDPNVNWTEN
GAGWVKLARIEIPALDPGDAAARAARIAAGDRMAFNPWNTLPEHRPLGAVNRVRNKVYKELARARNAEGV
>gi|56697048|ref|YP_167410.1| universal stress protein family protein [Ruegeria pomeroyi DSS-3]
MSSSVLCAVDISNPDSDAPILKQAARLADLDGARLDVVTVLPDFGETWVSGFFEAGHHDKAVKAAHDKLV
ALCAQVLGAERNADIRHVVATGTAYKEILKTAQGAGSDLIVVGAHKPDLADYLLGPNAARVVRHAPVSVY
VVRAG
>gi|56697049|ref|YP_167411.1| TRAP transporter, 4TM/12TM fusion protein [Ruegeria pomeroyi DSS-3]
MTSEIQGNRPLSEEELQDLVASSDAGARDPAGSIGLFLAIVAVIWSVFQLILASPLSNMLLPGSIVNNSR
QVHLAFALFLAFAAYPALKSSPRDRIPAQDWVMAVLGAGIALYGYFFYDKLVNSGGLADDTDKWVALVGL
ILLFEAARRALGPAMAIIATIFLAYVFWGASEWVPEVIRWKGASLKKAMSHMWITSEGVFGIALGVSTKF
VFLFVLFGALLDKAGAGNYFIKMAFGALGHLRGGPAKAAVVGSAATGLISGSSIANVVTTGTFTIPLMKR
VGFTSEQAGSVEVASSVNGQIMPPVMGAAAFLMVEYVGISYVEVITHAFLPAAISYIALIYIVHLEAVKR
NMPTLGNREVHLIRTVAGMLSFFLIFAGLCYATQFPAQAIAAWAPSSAGLIMGLIVTAIYIVLVRLAAQV
PDLEPDDPNAEVVELPDIAQIYKAGLHYLLPIVVLVYFLMIEQKSPGLSAFWATALLFVILLTQKPLKSL
FRGESEMATSFMSGVADLWQGLIDGARNMIGIALATGTAGVIVGTVTLTGVGQVMADLVEFLSGGNLVLM
LVMVGLLSLVLGMGLPTTANYIVVSSLMAGVVVQLGAQSGLIVPLIAVHLFVFYFGIMADVTPPVGLASF
AAAAVSGGDAIKTGFTAFFYSLRTVALPFVFIFNTDMLLIDVGWVGGILVAISATIAVLVFTAGTMGFFL
TRSRIYESVALILVAFVLFRPDYVMNRIAPPFELFEPARLEQAVGDAAPGDVLRVIVSGPDFDSGEMKDL
SLELTVGDESDGAARVEAMGFLTLEEDGLIKLEEPLFGTPIAESLQDFDFYADEAVRIVTVKAPANQPPK
ELVFIPALLLLGLVAFLQRGRAARQGVPA
>gi|56697050|ref|YP_167412.1| TRAP transporter solute receptor TAXI family protein [Ruegeria pomeroyi DSS-3]
MSAQKSNGSFNMNRNSKLGLGALVTAAFLAPAAMAEEFITIGTGGVTGVYYPTGGAVCRLVNKGRKEHGV
RCSVESTGGSVYNINTIREGELEFGVAQSDWQYHAYNGTSKFEEAGKFENLRAVFSIHPEPFTVVARADA
GITSFDDLKGKRVNIGNPGSGQRGTMDVVLEAKGWTTGDFALASELKAAEQSAALCDNQIDAMIYTVGHP
SGSIQEATTACDSVLVNVDGEAIDKLVADNSFYRKATIPGGMYRGNDGDTTTFGVGATLVTSADVSEDAV
YALVKAVFDNFEDFKKLHPAFANLTEAEMIKDGLSAPLHSGAEKYYRERGWIN
>gi|56697051|ref|YP_167413.1| acetyltransferase [Ruegeria pomeroyi DSS-3]
MRIRRARQEDIDALMAIRAGVRENRLSDPARVGRADYQEFLTLSTLWLCEIGGEVAGFAASDPRDGSIWA
LFVAPGHEGAGCGRALLARACADLRLAGWSEAWLTTEAGTRAERFYRRNGWLPQGVTADGDRVFRRALT
>gi|56697052|ref|YP_167414.1| AsnC family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MPQTLDDADLTILRSLQEDCRLGLEELAHRCALSVPSVQRRLKRLRADGLIEKEIAVLDPAGFEWKMTFV
VMVELDRETLQQLDLFRKRAKAEPQVQQCYYVTGEADFILICTARDMQDFEALTHRLFFENSNVRRFRTS
VSMERTKVSLSLPI
>gi|56697053|ref|YP_167415.1| histidine utilization repressor [Ruegeria pomeroyi DSS-3]
MGEDTRVSYQDIKARVLAAIRDNTWPPGAMLPGEVALAQEYGCARATVNRAMRELAEEGILERKRKAGTR
VKLAPARQARFSIPVVREEIEALGASYRYALVSRSEEATPKWLAAQLGLGAGDRVLHLVCMHYADERPFQ
LEQRWINLATVPQAAKKDFSQTGPNEWLVSEVPFTDIRLSFSACRGNRETAEFLGGNETDAHFTVERVTW
LGERPVTYARLLFHAGYRMTTTL
>gi|56697054|ref|YP_167416.1| imidazolonepropionase [Ruegeria pomeroyi DSS-3]
MTPVGTEAVPSFFMTGHKKLLLIHFREKSLPGPDMTLALFHNLTLASMTDGPTPYGLMPKGALVAEAGQV
LWSGPQAELPAAFAAVPAHDLGRRLVTPALIDCHTHVVHGGNRANEFEMRLNGASYEEVARAGGGIVSTV
SATRTATEAELLASALPRVDAMIAEGVAVIEVKSGYGLDIETELRMLRAARAIGQHRDVTIRTSFLGAHA
VPADFAGRADAYIDTVAIPALRTAHAEGLVDAVDGFCEGIAFQPEQIARVFDVARDLGLPMKLHAEQLSN
LGGTKLAASYGALSADHIEYLDEDGVAAMARAGMTAVILPGAFYTLRETQKPPVALLRKHRVPMAVSTDA
NPGSSPMTSLLLAMNMACTLFRLTPEEALAGTTRNAARALGMADRGTLAPGQRADLAVWDVAHPAELAYR
IGFNPLYKRIIGGTL
>gi|56697055|ref|YP_167417.1| histidine ammonia-lyase [Ruegeria pomeroyi DSS-3]
MTALTLTPGSATLEHLARIYFDESPVRLDPACRPAVEAAAARIRAAAAGDVPVYGVNTGFGKLASLKVAP
QDTATLQRNLILSHCCGVGAPIPRRMARLMMVLKLLSLGRGASGVRWELITLLQEMLARDVTPVIPVQGS
VGASGDLAPLAHMTAVIIGAGEAEYQGQRLPGAEALARAGLTPIALGPKEGLAFINGTQFSTAFALAGLF
GAWRAATSSLVTAALSTDAIMGSTAPLQPEIHALRGHRGQIDAAARMRALLDGSEIRESHREGDTRVQDP
YCIRCQPQVTGAAMDVLRQAAQTLEIEANAATDNPLVLAEADMIVSGGNFHAEPVGFAADLIALALSEIG
AIAQRRVALMVDPTLSFDLPPFLTPKPGLNSGLMIAEVTTAALMSENKHLANPCVTDSTPTSANQEDHVS
MAAHGAVRLGRMVENLHYILGVELLCAAQGIEFRAPLQTSTALQAAVARLRAEVPRLEEDRYMAPEIETA
ARLVGAGALLDVVGIDMGGLRP
>gi|56698738|ref|YP_167418.1| N-formylglutamate amidohydrolase [Ruegeria pomeroyi DSS-3]
MTPVAVIRGDSPVVLGMPHGGTFVPDAIHARLNPRGQGLSDTDWHIDRLYADLLPGASVVKSTVHRYVID
ANRDPAGASLYPGQNTTTLCPTTDFDGHDIWLPGQAPSDDEIAERRATYHAPYHAALAEALERARDRHGV
AVLYDCHSIRSDIPFLFAGTLPIFNIGTNNGTTCAPEIAAATLETCRAADPDQTVLNGRFKGGWTTRHYG
RPEIGQHAIQMETAQRAYMDEAAPWTYRPERADRLRPVLAELLTQLKTLALSGRLSSPRGA
>gi|56697056|ref|YP_167419.1| urocanate hydratase [Ruegeria pomeroyi DSS-3]
MLDRKNTRDIYPPTGPERTAKSWQTEAAMRMLMNNLHPDVAENPHELVVYGGIGRAARTWSDFDTIVATL
KDLEADETLVVQSGKPVAVVRTHADAPRVLIANSNLVPHWANWDHFNALDKKGLMMYGQMTAGSWIYIGT
QGIVQGTYETFAEAGRQHYGGDLTGKWILTGGLGGMGGAQPLAAVFAGACCLAVECNPDSIDFRLRTRYL
DEKAETLDEALAMIDRWTKAGEAKSVGLLGNAAEIFPEIYARMQAGGLRPDIVTDQTSAHDPINGYLPLG
WTMAEWKDKRESDPKAVEKAARASMKQHVAAMVDFWNAGVPTLDYGNNIRQVAQDEGLENAFAFPGFVPA
YIRPLFCKGIGPFRWCALSGDPEDIHKTDAKMKELFPDNTHLHNWLDMAQERIAFQGLPARICWIGLGDR
HKAGLAFNEMVASGELKAPVVIGRDHLDSGSVASPNRETEAMRDGSDAVSDWPLLNALVNTASGATWVSL
HHGGGVGMGFSQHAGMVVVADGTPEAARRLERVLWNDPASGVWRHADAGYETAVDCARAHGLRLPGILGN
>gi|56697057|ref|YP_167420.1| N-formimino-L-glutamate deiminase [Ruegeria pomeroyi DSS-3]
MTVFANRLLGPKGWLLNARVTIDGLFIASVEPDSAPLPGDVRVDTLLPAPGNLHSHSFQRAMAGMTEYRS
RGRESFWTWRELMYRFLDRLTPEHVAAIAAQTFVEMQKAGYAAVGEFHYLHHRPGGGHYDDRAEMSARIV
QAAAETGIGLTLLPVLYTHGGADGRALAGGQLRFGNDLDAYCTLVEGARAHTRTLAADARVGIAPHSLRA
VSATDLAEVAARHPDGPVHIHIAEQTREVEEIEAAYGARPVDWLLNNAAVGPRWCLIHATHMSDAETRAM
ASTGAVAGLCPITEANLGDGIFNGVPYLEAGGAFGVGSDSNVLISLTEELRLLEYSQRLRDRERNVLAGA
EGSTGAALYLGALRGGARALDRRAGEIAPGALADLVAIDSNAPALCALEPEQLLDGLIFAAGERVVSDLW
SAGRHQVRAGRHVAEESIARRYGAALRDLLARV
>gi|56697058|ref|YP_167421.1| amidohydrolase family protein [Ruegeria pomeroyi DSS-3]
MDFAARLTHLRHDLHRHPELGLAETRTKAVVAALLRDLGIEVHEGAGVVGVLRAGTGNRAIGLRADMDAL
PITETATHDHVSTTPGVMHACGHDGHMTMLLGAAEELARAADFDGTVVFLFQPAEEHGLGARAMIDEGVL
ERFPIDEVYAIHNLPGAPLGHVSTRPGLICNSETLFQINITGQGGHASMPQAGVDAITVGAEMVTALQTV
VARKLAPASGAVISVTEFLTDGQRNVLPGHATLKGDFRARAPQDRAEIQRFMEQIARGVAAAHGVRVAVT
FDTQFVETMNAPEPVQAVCRAARAAGLEAEGNREPMSFSEDFAHFTAAVPGCFLLMGNGTEGAHAQPLHA
SDYDFNDALLPIGAAFWAALVRDRLPQRKD
>gi|56697059|ref|YP_167422.1| diaminopropionate ammonia-lyase [Ruegeria pomeroyi DSS-3]
MKDLLPAAQLGHVACAPTRGDAAHRVLSQQDFDAAEAEITQWEGYAPTPLVSLPALAEAIGVGAILYKHE
GPRFGLGSFKALGGAYAALGVLQREIARRTGAQVELADIRAGKHRDAVAGITLVSATDGNHGRSLAWGCQ
RFGAPCRIYIHAEVSEGRAQAMRDLGAEVIRIDGDYDASVRMAKDEAEAHGWFVVSDTSWPGYSDPPRDV
MAGYGVMVREVCREMDRAPTHVFLQGGVGGLAAGVTAALVQHWGEASPRVVVVEPDRAACLYESARAGAA
TAVEIAEETIMAGLSCGEPSPLAWAILAEEARDYLTIPDTLVAPTVRLLAHPLGGDPVVEAGESAVAGLA
ALIAACSDAALSDSLGLDRSARVLLIGSEGITDPEIYARIMAGEDMV
>gi|56697060|ref|YP_167423.1| hypothetical protein SPO2197 [Ruegeria pomeroyi DSS-3]
MSGLLALLDDVAGIAKVAAASVDDVAAQAAKAGVKAAGAVIDDAAVTPKYVHGFAPARELPIIWKIARGS
IRNKLLILLPAALLLSNFAPWLIAPLLMLGGAYLCFEGAEKVYHVLVPHDTSHVFKEDKPGDPLHLEEEK
AAGAIKTDFILSAEIMTIILAAIPESGFWMEAATLAVAGIGITVAVYGSVALIVKADDVGLFLAQNGRLG
VTRALGRGLVRGMPGFMHLLTVVGTAAMLWVGGSIVIHGMEVLGFGWLGHHIHDLAYAAGHAVSESWAGA
VEWITKAALDGVFGLALGFVLIPLATRLIAPLWRMLTGKGGAAKGH
>gi|56697061|ref|YP_167424.1| glyceraldehyde-3-phosphate dehydrogenase, type I [Ruegeria pomeroyi DSS-3]
MTIKVGINGFGRIGRCTLSHIAASGRDDIEVIKVNATGPLETAAHLIKYDSVHGRFPGEVSLGEGTMNLG
RGDMQMFSTYDLNELDWSGCDVVLECTGKFNDGAKAKVHLERGAKKVLLSAPGKNVDKTIVFGVNDDQLT
AADTMISNGSCTTNCLAPLAKVLDEAFGIEHGIMTTIHAYTGDQPTLDRRHKDLYRARAAAMSMIPTSTG
AAKALGEVLPNLKGRLDGSAIRVPTPNVSAVDLTFRAGRDVTTAEVNAAVEAAAKGPMKGVLGYEPAPLV
STDFNHTPESSIFAPDQTRVVENRMVRVLAWYDNEWGFSVRMADVAVAMGRLG
>gi|56697062|ref|YP_167425.1| hypothetical protein SPO2199 [Ruegeria pomeroyi DSS-3]
MRQGARSGYLGGRFCRSRDIMTNQISIWLGVILLGTVMLDFAMFGTEHMLFLGKKLFELLEWLAFWR
>gi|56697063|ref|YP_167426.1| phosphopantetheine adenylyltransferase [Ruegeria pomeroyi DSS-3]
MRVALYPGTFDPITLGHVDIIRRAAALVDKLVIGVAINRDKGPLFTLEERVAMIEAECAALSAETGTEIV
AHPFENLLIDCARDVGAQIIVRGLRAVADFEYEFQMVGMNRALDDSVETVFLMADARRQAIASKLVKEIA
RLGGDVSKFVPPRVNDALKERLGRA
>gi|56697064|ref|YP_167427.1| CBS domain-containing protein [Ruegeria pomeroyi DSS-3]
MLVQAILKSKASDGVVTVSAAATVAQAAAILAEKRIGTVVVSDDGETAQGILSERDIVRELAASGSGCLS
EPVSTYMTKDLITCGRDAKVQDVLSQMTEGRFRHMPVIEEGKLVGLVTLGDVVKAQLAELAMEKDALEGM
IMGH
>gi|56697065|ref|YP_167428.1| LysR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MEPHWDDMKVFLAVAREESLSGAGRQLKLDPATVGRRIARLESAYDTPLFAKSPQGYTLTAAGERLLSHG
EQAEAAMRSASEALAGTTEGLTGQIRIGAPDGSANYLLPQVCAQISDENPELDIQILALPRIINLSRREA
DMAVTVSAPTAGHLLVQKITDYKLHMVASRRYLRGHPPIETLADLRGHRMIGYIPDMIFDRELDYLNDIG
IERVALASNSVSVQLRQAGHGSGICVAHDFTLPFHGNLRRILTDQVSLTRSFYLVRHQGDQRSERLNRFA
EALTRGIRDEVARLEADAMS
>gi|56697066|ref|YP_167429.1| methylmalonate-semialdehyde dehydrogenase [Ruegeria pomeroyi DSS-3]
MQELTHYINGEHVKGTSGRFADVFNPATGDVQAKCPLASTEEMARAVEIAAAAQPAWAAVNPQRRARVMM
KFVDLLNRDMDKLAEALSREHGKTLPDAAGDVQRGLEVVEYCIGAPHLLKGEFTDSAGPGIDMYSMRQPL
GVTAGITPFNFPAMIPMWMFAPAIACGNAFILKPSERDPSVPLMLAELMEEAGLPKGILQVVNGDKEAVD
AILYNPVIQSVGFVGSTPIAEYIYGTGCAQGKRVQCFGGAKNHMIIMPDADMDQAADALVGAGYGAAGER
CMAISVAVPVGDDTADRLIEKLVPRIEKLKVGPYTAGKDVDYGPVVTAAAKENILRLVNSGVEQGAKLVV
DGRDFSLQGYEDGFFVGPHLFDHVTPDMDIYKKEIFGPVLSTVRAKTYEEALGLAMDHEYGNGTAIFTRD
GDAARDFANRINIGMVGVNVPIPVPLAYHTFGGWKKSAFGDLNQHGPDAFKFYTRTKTVTARWPSGIKEG
GEFSIPVME
>gi|56697067|ref|YP_167430.1| hypothetical protein SPO2204 [Ruegeria pomeroyi DSS-3]
MCSSLAAYNHRSSPMKRFVLAFCAALMLTGLALVAPEPSQAGEDKPGLFITLTTDDTWAAGKAIMFAHQR
ALKSGYDTAIWLNVRAVYLADKKRPSHIHGLMAGQGATIQDMLSAFIADGGTVLMCGACSKAAGLTQADY
IDGVTMGSWPVVESWLFRDNMRTLAW
>gi|56697068|ref|YP_167431.1| ErfK/YbiS/YcfS/YnhG family protein [Ruegeria pomeroyi DSS-3]
MRQYAVRQIRQENRSPYMSTTRMTRRATLLGAAATLAAPALARAQSTDAFPQAETAIRDQVPVRRNISSF
LQQNWQDHFETLGVGCLLADISSRAVHYWGADGSYKLYPSSVPMTEELTRRGYTEVVRKTVNPSWTPTAS
MRERDPTLPVRMEGGEVGNPLGTRAMYLTWPAYLVHGTHDTRKIGRQSSSGCIGLYNQHVEELYELVQVG
TQVRLL
>gi|56697069|ref|YP_167432.1| hypothetical protein SPO2206 [Ruegeria pomeroyi DSS-3]
MQKIAKTAMLSMAFALSASYVTAGPDQVSILLGSHHVGATRTFEEVNPGLFLTWTEVAIGQRLDLTVGAF
RNSYGDGSVAVSGVYPLYRTQDWGFDLFAGVAWYPGNGDQFNHAVDDMVPLGGVQMRYRNLFIQALPGGG
NAVDATLTYGLTFPLN
>gi|56697070|ref|YP_167433.1| hypothetical protein SPO2207 [Ruegeria pomeroyi DSS-3]
MKGTGMRHATVLTLVISAGISLSAAALADQSPSDKARQHSTAARFDPLIWAEAALGNRVDLTMGALPSGS
RNGPLALSAALPVAETGDLRVSLVGALAWDAEMAQSSRYSIGAVAPVAALEARYRSAYLRAVPSESLGAD
TRLNFGLTIPLK
>gi|56697071|ref|YP_167434.1| hypothetical protein SPO2208 [Ruegeria pomeroyi DSS-3]
MKKRRFPRVNAVLSRWGVALSDARETQAEQARLADFEARGGLEAPAYALSPGMRTFDLAPLVEEYAQHGE
ALAALHDPARNQTGYRSGNGYYDTPDAEALYLMIRRYQPRRVIEVGCGNSTRITRQAALDGGLETEITAI
DPWPRADIAGVVDRFEQARLEEVDPAVFAALEADDVLFIDSSHQVRMSNDVAHLFCRIIPALAPGVVIHV
HDVFLPYEYPKRFFYDCPSWAEQYVLHALIQSGGYDILWPGYYLQRARPDAVEALPFLGQGRAQSFWIRK
L
>gi|56697072|ref|YP_167435.1| carboxylate-amine ligase [Ruegeria pomeroyi DSS-3]
MPVHWSKTGSGGVMQKEFTLGIEEEYLLVDRDSLQLAEAPEALMSTCQADFEGQVSPEFLQCQIEVGTRP
HATIAAAREDLKRLRAGVSQRAAEHNLTPIAVSCHPFASWKDQHHTRKERYDALQHALGGVARRMLICGM
HVHIGVEDKALRADLMPQLSYFLPHMLALSASSPFWNGEDTGLSSYRLTIFDNLPRTGLPPSFSSWAEYE
RTTGILVELGVIEDTTKIWWDLRPSHRFPTLETRIMDVQPRLEHALSLAAMNQALMRMLCRMKARNLRWR
HYDRFLVGENRWRAQRYGVGEGLIDFGDRSLKPMTVLMDELMGMLSEDAEALGTLPEIARLRQIAEHGNS
ATRQRRVHAEALARGEDAGRAVVRHLIEEFHADL
>gi|56697073|ref|YP_167436.1| BNR/Asp-box repeat-containing protein [Ruegeria pomeroyi DSS-3]
MSVLHADTEPRFHPLQGSIVKSYDPVTIDVHPGPLLYDPSEERLWRVFSEARSHQPSFGMSVTAEFSDDS
GCSWQGRRTIFPGDQNLKILATSGIYLNGRLMVIVNTENASNQRSLKLIYSDDHGASWLQQTPDISTNSS
HFLFGITHRYDANAGGHDDNGAVFYTYHGGSAFAFTTADKGATWSTHTVFDMATTQFINDQGQVATDFVA
SELTIARVPQSDDYVLYIRGSGYPNYLAATSTDMTSVGTTALTMPRDSGILNEGYAPNKSVGSPPHLVSF
GDEITLYTFGRENWVKYDIPREQAMLSYTQNAQDLFANKGIFANKVPRVAARLPTRAVGMMFHVDTTDSI
VAHLRAGESIYEINNDVYSPCVGQLYFLSRTQIPSNVLTTRENLLDNPTFDLWARGDSFTDVTANGTPVA
ERWQLWCSGDTLTATREDVDHLLSNNQSFKPKYAMRVKSTGQTGNDYSGIRQVFYGKNNLRRFSERELTL
TIYGIGELPSNLRFSIHFYNRDNPTIITHAAATLPVPVTAAGQFTSTSATLYTPSEDAVALGDNPGIAIV
VDQLGTDLWDFAFAGLKLEAGFGSSVLSYPNLEIESSKALYYFERFGFDSGIGLGTQRADNDGFRANVKY
HPKTIVPSIVTELPKDGFGNPIWTNKFEIRHLTGTTACTGIKAATTIAQKDQAWIDFWTKEAEFDYYAGE
CWSIASDAGFFIDVEA
>gi|56697074|ref|YP_167437.1| acyl-CoA dehydrogenase [Ruegeria pomeroyi DSS-3]
MDFALTEEQTAIFDMAHAFGQDNIAPYARQWEAEGTIPKDLWPQVGELGFGGLYVSEEAGGAGLSRLDAT
LVFEALSMACPSVAAFLSIHNMCAKMLDNFASDELKTRVMPDVLSLNTVLSYCLTEPGSGSDAAALKTRA
EKSNEGYVLNGTKAFISGGGYSDAYVCMVRTGEDGPKGISTVYVEDGTPGLSFGALEDKMGWKSQPTAQV
QFDDCKVPAGNLVGVEGDGFKYAMMGLDGGRLNIASCSLGAAQTALNMTLQYMGERKAFGKSIDQFQALQ
FRLADMEIELQAARTFLRQAAWKLDNKTPDATKFCAMAKKFVTETGSKVVDQCLQLHGGYGYLADYGIEK
LVRDLRVHQILEGTNEIMRVIVARHMLANR
>gi|56697075|ref|YP_167438.1| enoyl-CoA hydratase/isomerase family protein [Ruegeria pomeroyi DSS-3]
MADIDIRVTGRAGRITLTRPQALNAMSYDMCMAIDAALRNWREDDDVALVIIDAEGDKAFCAGGDIAELY
DTGTKGNYDYGRTFWRDEYRMNAMIFEYPKPVVSFMQGFTMGGGVGIGCHGSHRVVGESSKIAMPECGIG
LVPDVGGTLMLALAPGRLGEYLGTTAGRMGPDDAIFAGFADIYIPQGDWAGLIEMLEASGDPALLAPHAQ
TPPPGELRAMQAEIDRHFGGETLGDILTSLKGDGGEFSSKILASLRRNSPLSMACTVEMLHRLRGATLSI
RKALELEYRFTYRAMDKGDFLEGIRAQIIDKDRNPRWQYADLTVPAVAVSAMLQPLGAEALTFEEEEA
>gi|56697076|ref|YP_167439.1| 3-hydroxyisobutyrate dehydrogenase [Ruegeria pomeroyi DSS-3]
MKIGFIGLGNMGAPMASNLAKAGHEVTGFDMAPVEVAGVTRAASAAEAARGADVVVTMLPNGQILRAVAA
EVIPAMTAGAALVDCSTVDVDSARAVAADAEAAGLLAVDAPVSGGIGGAAAGTLTFMAGGSDAAFEKAKP
LFDIMGQKAVHCGAAGAGQAAKICNNMILGVTMIATCEAFALADKLGLDRQKMFDVVSTSSGYSWTMNAY
CPAPGVGPQSPADNGYKPGFAAELMLKDLRLSQQAAGSADADTPMGQLAEALYAQFVENEGGKGMDFSAM
LPRFEKRTRG
>gi|56697077|ref|YP_167440.1| choline sulfatase [Ruegeria pomeroyi DSS-3]
MRIPDVKGRPMAVRTRPNILLIMADQMTPFMLEACGGTGARTRHLTRLAGRAVQFTNAYTPSPICVPARS
CFMTGLYTSTTGCYDNGDPYHSFLPTFAHYLTNAGYETVLSGKMHFIGADQLHGFQRRLNPDIYPSGFLW
SYPLPPDGDASFQAFDFTPQYLAENIGPGWSKELQYDEETQFRALEYLRHAPDTPWMLTVSFTNPHPPYV
VPRPYWEMYKDADIPLPDYPADMDARYSEFDHALRRWHGLHQRGHEVRDPRNLIAMRRGFAALAHYVDDK
IGALLEVLDETGQRDETVIIVTSDHGEMLGEKGLIQKRSLYEWSARIPLIIDLPGAAPGRVDTPVSLLDL
PATLIELSGQTPVAPLEGRSLLGAVRGQELDTVPIVSEYHGEGIMRPSFMVRLGDWKYHYCHGSAPQLYN
LARDPGEWHNRAGEPDLAETEARLDRVITGGSFDLERIAREVWERLPLKQVVNAAMQRNGTAWDYRPDPD
SGRAYIRS
>gi|56697078|ref|YP_167441.1| glyoxalase family protein [Ruegeria pomeroyi DSS-3]
MRKLQTQGVHHITLTGADRQSTIDFWEGVLGMPFVFDQPNLDNPDEGHVYFDPGDGRLITVFTNETRKGT
PDRTPTDPGCVHHIAFNVSQATFWQAVERLDERGIDHSGPRDRGFMDSIYFKDPLGLLIELASYRFEPPV
GCTHADVLLRAHRIRVARGDYNIDRIHLADAIEDLVTAHQDSLSEDRGPKNPW
>gi|56697079|ref|YP_167442.1| DNA-binding protein, putative [Ruegeria pomeroyi DSS-3]
MVDRFGDVLREWRQLRRMSQMDLGLSAGVSPRHISFLESGRALPSRGMVLRLCDELEVPGGARNRWLTSA
GLAPAYHSRNGDAPEMAPLTQAVDWMLSRHAPYPAMAVDRHWRLKTMNRPARAMFAATGLGAGDGLIDAL
LDNPALAAALENRDEVERLSLTRLRTELAHFGRDPVLEQAVARLAERVARQPGAADAPMPAVIPARYRLG
EAVLSFFTTITQFGATGDIAMSELRIEMFFPADDATRQMVEALWGNATPGN
>gi|56697080|ref|YP_167443.1| hypothetical protein SPO2217 [Ruegeria pomeroyi DSS-3]
MHSGRMRPRLPRQKQRQQEQRQKPAVHHHVERGPGQNRSGAVDHEPGQHPAQDDPRAGLGVAGIDVAHHL
PDHHAQPDQQTAADRGHQPNGGAVQSVRPVQRQDRKVQEEFQGRALIQRDGGEHGQPEQRADNSGKR
>gi|56697081|ref|YP_167444.1| excinuclease ABC subunit A [Ruegeria pomeroyi DSS-3]
MAEQKFIEVRGAREHNLKGIDVDIPRDQLVVITGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLDM
MEKPDVDHISGLSPAISIEQKTTSKNPRSTVGTVTEIYDYMRLLFARAGTPYSPATGQPIEAQQVQDMVD
RIMAMEEGTRGYLLAPIVRDRKGEYRKEFLELRKQGFQRVKVDGQFYELDEPPTLDKKFRHDIDVVVDRI
VVREGLETRLADSLRTALDLASGIAILETAPRDGSSAPGGASSPGEEGSQETEEPLRITFSENFACPVSG
FTIPEIEPRLFSFNAPYGACPKCDGLGVELFFDERLVVPDQSLKVYDGALAPWRKGKSPYFLQTIEAIAR
HYQFDKNTPWKDLPEKVQQVFLRGSGDEEIPFRYDEGGRVYQVTRSFEGVIPNMERRYRETDSNWIREEF
EQYQNNRPCGACGGFRLKPEALAVKIAGLHVGQVVQMSIREALAWAEAAPASLSKQKTEIAQAIFKEIRE
RLGFLNNVGLEYLTLSRSSGTLSGGESQRIRLASQIGSGLTGVLYVLDEPSIGLHQRDNDRLLTTLKNLR
DQGNTVIVVEHDEEAIREADYVFDIGPGAGVHGGQVVSHGTPAQIAADAASVTGQYLSGSREISVPAERR
HGNGKKLTVVKATGNNLREVTADFPLGKFVCVTGVSGGGKSTLTIETLFKTASMRLNGARQTPAPCETIK
GLEFLDKVIDIDQRPIGRTPRSNPATYTGAFTPIRDWFAGLPEAKTRGYKPGRFSFNVKGGRCEACQGDG
VIKIEMHFLPDVYVTCETCKGARYNRETLEVKFKGKSIADVLDMTVEDAQEFFKAVPSIREKMDALSRVG
LGYIKVGQQATTLSGGEAQRVKLSKELSRRSTGRTLYILDEPTTGLHFEDVRKLLEVLHELVEQGNTVVV
IEHNLDVVKTADWIIDIGPEGGDGGGMIVAEGTPEDVAASERSHTGRYLKPMLNPERVAAE
>gi|56697082|ref|YP_167445.1| rhodanese-like domain-containing protein [Ruegeria pomeroyi DSS-3]
MFFFRKPSLPGLSITEAVDAAARGDLLVIDVREAGELAATGKAAGALHVPLMQLSARADRNHPEFEPLLE
GASRIAVYCASGGRSARARKLLLGLGYPEVHNLGGLGHWARAGGRIERA
>gi|56697083|ref|YP_167446.1| hypothetical protein SPO2220 [Ruegeria pomeroyi DSS-3]
MRVVLQMAPPIASGRGGQGLITCPGHKERRVASLNRIAMARSSRRMIKDLGPEGLEVAEISGKWGQQFPF
RSYRRFIYPEYDICAGPYCDAAGEIEQFDLILANQVWEHLDRPYEATLNVLEMLRTGGHFWLAVPFFVPF
HAAPMDNSRWSARGLRNFLIECGFAEEEIRAEQWGNRHAALRNLERPWPPVYDPETDPLDNDPDFPICAW
AIARKT
>gi|56697084|ref|YP_167447.1| von Willebrand factor type A domain-containing protein [Ruegeria pomeroyi DSS-3]
MKRIGLAALALCLPATLAAQDQPSAILVLDGSGSMWGQIEGKAKIEIAREVVTGLLADLPQDQPLGLTVY
GHRRKGDCTDIETLVAPAPGNRAAIASAVAGLKPKGKTPMLEAVRQAAEALRYTEEKATVILVSDGVETC
DADPCATAAALEAAGVDFTAHVVGFDIDDPQALAQMQCLADQTGGTFRSAANADELGAALAAAATVKPDP
APGPARLLFAATEAFGSTFREVEVVWEVFTEDGAQAMDATQVMSGETQLPPGTFLVRALRLSDETVEERR
VTLQPGGREVVEIAFDEPLPAATLSAPASGTAGGMVEVSWTGPDGEGDYLAAGPVGANDASYLTFEYTAK
GNPLPLRLPVEPGAYEIRYVLADGIQTLARLPITVSERSFALDAPGSAPVGSLVQVEWSGGGFDEDFLTV
AKLDASSDGNDYLTYAYVRDGNPVGLRMPLAPGQYQLRYVVGQDSSVAISQPITVSDLSVTLEAPDRVAA
GSMVAVSHTGPAYDGDYVTFVTPDAGVLDYLGYAYTSDGATVQVQAPDMPGSYELRYVSTISGERIFARR
AVVVE
>gi|56697085|ref|YP_167448.1| dihydrolipoamide dehydrogenase [Ruegeria pomeroyi DSS-3]
MAAQSYDVIVIGAGPGGYVAAIRAAQLGLKACVVEREHLGGICLNWGCIPTKALLRSSEVFHLMERAKEF
GLKADNIGYDLDAVVKRSRGVAKQLSGGIGHLMKKNKIDVVMGEATIPAKGKVSVKTDKGTQELTAKNII
LATGARARELPGLEADGDLVWTYKHALQPVRMPKKLLVIGSGAIGIEFASFYNTLGADTTVVEVMDRVLP
VEDAEISAFAKKSFVKQGMKIMEKSMVKQLDRAKGKVTAHIETGGKVEKLEFDTVISAVGIVGNVENLGL
EALGVKIDRTHVVTDAYCRTGVEGLYAIGDIAGAPWLAHKASHEGVMVAELIAGKHAHPVKPESIAGCTY
CHPQVASVGYTEAKAKELGYDIKVGRFPFIGNGKAIALGEVEGMIKTIFDAKTGELLGAHMVGAEVTEMI
QGYVVGRQLETTEEDLMHTVFPHPTLSEMMHESVLDAYGRVIHM
>gi|56697086|ref|YP_167449.1| hypothetical protein SPO2223 [Ruegeria pomeroyi DSS-3]
MWRTDVMKTLKDLFLALLNATLILVALCLFLGWRMMATVDTVSDRVTASIAELTPLRDEIAGVRAELSGL
RADLAAAPGTAASARLQNRLDGLEARLDGMQARMASLATLPDQLLDRAFETAADRMARGVAELRGCQPAP
GGT
>gi|56697087|ref|YP_167450.1| hypothetical protein SPO2224 [Ruegeria pomeroyi DSS-3]
MVGPEDVLKFWLDEVGPAGWYAQDEALDARIRDKFQSTWEAAAEGRFSLWLTYPSGALAYIILTDQFPRN
MFRGSGKAFATDRAALMAAKCAVDKGWDLKIDEPARQFFYLPMMHSENLCDQERCVRLMCQRMPESGASN
LLHARAHREVIRKFGRFPYRNQALDRASTQSEAEYVSDGGYGATVQQLQRKAG
>gi|56697088|ref|YP_167451.1| hypothetical protein SPO2225 [Ruegeria pomeroyi DSS-3]
MLQVLSSAWALLLGIGLLMVGNGLQGTLLGVRGEIEGFSTFEMSLVMSAYFVGFLGGSRMAPEMIRRVGH
VRVFAALASFISAVMILYPAFANIYVWMLGRVIIGFCFSGVYVTAESWLNNAADNSNRGKALSLYMIVQM
TGIIVAQGLIQVGDPGGYEAFIIASIVVSISFGPILLSISPTPAFDSTKPMSLKALMQTSPLGCVGMFLL
GGVFSAQFGMSAVYAANVGLTLSQLSIFVATFYVGALVVQYPLGWLSDRMDRRVLILFVALVGGGGAMLG
AMLGGQFEFLLLAALIIGGLSNPLYSLLIAYTNDYLDYDDMPAASGGLVFINGLGAIAGPVTTGWLMSDG
VFGPPGFFFFIASLMFATAAYAAYRATQRPSTPVEETSSMAYMYPTASPVAIEMAQEVAFEADQEAEEQK
>gi|56697089|ref|YP_167452.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ruegeria pomeroyi DSS-3]
MKLSDFDFDLPDDLIATRPAQPRSSARLLVARGDAISDAVVRDLPDWLRPGDRLVLNDTRVIPARLSGTR
QRQSAQGPVTARIEITLLEPRADGSWSALAKPLRKLREGETIIFSNDLSADVEAIEDGQALLRFNLTGPD
FDAALAQAGAMPLPPYIAAKRAADEQDKTDYQTVWARHSGAVAAPTASLHFDDTLLAALAAHGVTFTHVT
LHVGAGTFLPVKVEDVTTHKMHAEWGRVSAEAAAEIAATKAAGGRVIPVGTTALRLIESAARGGQIAPWE
GDTDIFIYPGFDFRVADGLMTNFHLPKSTLLMLVSALMGQESIRKIYAHAVENRYRFFSYGDASLLLPG
>gi|56697090|ref|YP_167453.1| hypothetical protein SPO2227 [Ruegeria pomeroyi DSS-3]
MEDIDKTSDGADPGKPRRSRRRVTLLWAMRGTVLLVFLAGFAGLMVVGQTLQAPPWLQSRVESRLARALE
GGAIRFGGVYFVINKGWRPRLRLRDVELSDAGGRVIARLADAEASLAMRPLLRGQVQPKRIVLNGASAAL
RRDAEGQVSLSLGGQGGGTVGQASTLAQLLESLDAVFLHPQLSALSSVELTSLSLEYEDLRQGRGWTLDG
GQVLITRGGGDLRIATEFSLLSGRDFASRFEANYTSTLGQPAASFGISIEDLAAADIAAQAPALAWLQVL
DAPISGALRGGIDAAGTLTPISATLQIGQGALQPNPKTRPIPFASARTYFTYDPAQQRLSFAEVAVDSAW
GAAQAEGVAYLDGVEAGRLDRLVGQFRLHGLRVNPAAVYPEPLTIDRAEVDFRMTLNPFQLRIGRMDVID
DGRTLRLDGDLSAAPEGWQLALDAQLDAITPAQVLSYWPEGVAPKPREWVAENLVEAQLSDLDLALRLRP
GAKPDLYADFDFAEAQIRYARTLPPLVRARGQASLLDGRFAVTADAGVVVAAQGGEMDATGTSFIIPDIG
IRQAAPGIARIMASGPVTAALSLLNEPPLSILDKANLPVDLAEGTARLTGTLALPLKDKVRIADMEFHLA
GVVEGVASEVLVPGTRVSAPRLEVSGDQTRIALQGAGLFGSVPASMRWQQPLGQGQRSNLSGRIALTPDL
IREQRLGLPDGMLTGAGEADFTLGIGGGEPLRLAAQSNLSGVRLSLPELGWSKPPASTGRLALEATLGAG
GRVETIEVEAAGLRTRGSIEFNPDRSFARARFSSFELGDWLAVPVELVGRGAGAVPDIVVQGGVLDLRRA
SFGSGASGGSGGGGAAPAVSLALDRLQVSDSMTLSGMRGSFSTGGGLNGRFTGSLNGQAPISGQLIGRGA
RSAVFLQAEDAGAVFRAAGILDQAHGGSFQLVMEPVGAPGNYDAQLRVRNTRVRDAPAMAALLNAVSLVG
LIDEMSGQGILFGEIDSKMRLTPTTLTVLEGSAVGPSIGVSINGTVDTENRVLDLRGVVSPIYLLNAIGS
VLTRKGEGLIGFNYTLTGPMQRPQVFVNPLSGLAPGFLRDIIRAPAPSLPAVPEENSAPAPAAPAATPEP
APRPAPAPQPARPHSGGGDR
>gi|56697091|ref|YP_167454.1| AhpC/TSA family protein [Ruegeria pomeroyi DSS-3]
MPDVTDIAPEFTLPRDGGGEISLSDLRGRAVVLFFYPRDDTPGCTKESIGFSVNLQAFADAGAQVLGISR
DTVAKHDKFVAKHGLTTPLLSDAESDVCERYGVWVEKNMYGKKSMGIERTTFLIDGEGRIAQVWRKVKVD
GHVDAVLDAVRAL
>gi|56697092|ref|YP_167455.1| hypothetical protein SPO2229 [Ruegeria pomeroyi DSS-3]
MSLSLTEMAVEVLTTADGRAKTALSRRHAAAWFAARKGEATPIAVGTANPPPHPARPERPELLSPRDVPR
RRPGSEAGRIALLHAVAHIELNAVDLHWDIIARFGHVPMPIGFYDDWVKCADEESKHFNMICDVLESIGS
HYGALPAHAGMWRAAEDTAEDLMGRLAVVPMVLEARGLDVTPGMIDIFRKATLPAAVAALEVIYAEEVGH
VAYGSKWFHFLCGRENADPKEVFHALVRRYFHGALKPPFNEEKRAEAGLPPDFYWPLAEETEQRNRGV
>gi|56697093|ref|YP_167456.1| M24/M37 family peptidase [Ruegeria pomeroyi DSS-3]
MVSADFRRNRAVMGRVFALLVNKLARSALRRYSHVPRPRHHSIPGFCEGTTRDGRVRTRLAIKIHAFLEQ
KFPERRVFLKSDTDTRFIRLRPETQLIAFGGATLLVAWTIVATAILLMDSIGAGNFREQAKRDQATYQER
LNALSQERDARAEEAVAAQRRFNAALTQISAMQTELLASETRRRELETGVDVIQTTLRATMKQRENARAE
LAKMLDEKGDSAAVQEVAAEVPAQMDFMAAALERTAQQRDQIRADAQSALDARAELELEIKLMEERNDQI
FRQLEEAMTISLEPLDKMFRSAGMPTDRIIEEVRRGYSGQGGPLTPLSFSTRGEEPSADEIRANLLLQQM
DQLNLYRLAAEQAPFASPVRAAVRYTSGYGYRRDPKTGGKRMHNGSDFAGKHGTDIHATADGVVTHAGWQ
SGFGKLIKIRHAFGIETYYAHNSQLRVKVGQRVSRGDHIADMGSTGRSTGTHLHYEVHVNGRPVNPMTYI
KASRNVF
>gi|56697094|ref|YP_167457.1| hypothetical protein SPO2231 [Ruegeria pomeroyi DSS-3]
MFSKSKINEPAPKAPEAAKPAAPAAPAAPAPSDYKAAAPKPKPPASILSSDLHITGNIKTSGDIQVEGSV
EGDIRAHLLTIGETATIKGEVTADDVVINGRIVGRVRGLKVRLTSTARVEGDIIHKTIAIESGAHFEGSV
QRQDDPLNPGRAAKPGANPAAAAPAPKPEGA
>gi|56697095|ref|YP_167458.1| hypothetical protein SPO2232 [Ruegeria pomeroyi DSS-3]
MNLGGPGMRIFSLLLAIWLALPALAGPEIWRHEWPDTDFDKTSVAHWGEILSGGPPKDGIPALSDPAFVS
AATAEDLEGREPVITVALPGEVARAYPLRYLMWHEIVNDQIGTVPVAVTFCPLCNSGLTFDRRSPAGELE
FGVTGKLRNSDMVMYDRQTQSWWQQAQGLAIVGRLTGTELQTLPSWMESWDQFRARAPQGLVMAEPAFRR
AYGRNPYVNYDSARRPFLYDGEAPPHGIPALARVVRVGARAWPLTRLAAAGALEEAGLRFEWREGQASAL
DTARIGDGREVGSIRVRDGQGRDIAHDVMFAFAFHAFWPQGEWMLGAE
>gi|56697096|ref|YP_167459.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Ruegeria pomeroyi DSS-3]
MYKLAALLALFAVPAGATGLKIEVAGEANGTVTIDLLEDVAPKHVEQITALAASGAYDGVVFHRVIDGFM
AQTGDVQYGRMGGDMRLAGRGGSDRPDLPAEFSDITYERGVVGMARAQDPNSANSQFFIMFAPGPFLDGQ
YTVVGKVTGGMDVVDAIKRGTGPNGSVIGQPDQMKSVTVTD
>gi|56697097|ref|YP_167460.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Ruegeria pomeroyi DSS-3]
MAEIKDPENTIIIELKDGNVVIELLPDVAPKHSERMKELARSGEYDNVCFHRVIDGFMAQTGDVANGDME
DGFNIRMAGTGGSSLPNVPAEFSKLPHDRGTLGAARSANPDSANSQFFINFKDNHFLNGQYTVYGRVISG
MEHVDAITRGEPPANPDRMISVKVAADV
>gi|56697098|ref|YP_167461.1| phosphoglycerate kinase [Ruegeria pomeroyi DSS-3]
MGWKTLDDMDLTGKRVLVRVDINVPIVDGVVTDSTRIRRLMPTIRDILAAGGRPILLAHFGRPGGERRKN
LSLGQLVPTLERAFETKVLFADDCVGPAAEEAAEALQPGQVLLLENTRFHASETKNDPDLAAGMARLGDI
YCNDAFSAAHRAHSSTEAIARLLPSCAGRLMQAELEALEKALGKPERPVTAVVGGAKVSTKLELLGNLIE
KVDYLVIGGGMANTFLVAKGLPVGKSLAERIMKDTAAEILAKAEAAGCTIVLPSDVVVAEKFESHAPHQI
LPNDRCPDEGMILDAGPDSLAAIKAIFEKSRTLIWNGPLGAFELEPFDAATNAAALKAAALTRAGKLISV
AGGGDTVAALNASGAAGDFTYISTAGGAFLEWMEGKTLPGVAALIQAG
>gi|56697099|ref|YP_167462.1| hypothetical protein SPO2236 [Ruegeria pomeroyi DSS-3]
MMFRMVFMTTGLRWLHSTDLGDMRKAILSEDDDGPDGGGIRPAGLRARRSAAHAG
>gi|56697100|ref|YP_167463.1| hypothetical protein SPO2237 [Ruegeria pomeroyi DSS-3]
MTAKSRVRAFSLKLRMAVLKDRRAELKERILQELKRPAPCAQTLRMLKRRKLTLKDELARHEGLLRTLDA
MGHRAGLQSGNQLGRV
>gi|56697101|ref|YP_167464.1| LysR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MPPDITLRQLSYFSTLVAAGQYRRAARSLGISQPSLSLQIAALEKAVGARLLERRRSGLILTPEGRDVSE
MVARILREVEALTLYASPMRDNMTGTLRLGSTPTIGPYLLPRVLRQLHRQYPRLKLAIRDGAPRDLVEDL
AAGRYDLILTHLPVSRDDIRVAPLFREPLELAVDPAHRLAGATQVRQADLAGETMLSLSSGYALHGQVQA
LCESAGARLSTEFEGTSLDALRQMVSLGMGITLLPALYVASEVRTRGADVVTRPLRPAIHRIVGLAWRTA
SGTPPAIERFTELTRQVIRDEMSGILQPSA
>gi|56697102|ref|YP_167465.1| hypothetical protein SPO2239 [Ruegeria pomeroyi DSS-3]
MSRTTRPSIGAIVFFAVSFALAIYFTFAAVQGDFGLFRRVEIAAEREVLSRDLAKVEEQIVRMENLTRRL
SDDYLDLDLLDEQARSVLGLLRADEIVIR
>gi|56697103|ref|YP_167466.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Ruegeria pomeroyi DSS-3]
MTATRKTSRKSNTSAEELKHYYREMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLEAAAEEGDK
RITSYRDHGHMLACGMDPGGVMAELTGREGGLSKGKGGSMHMFSKEKHFYGGHGIVGAQVPLGAGLAFAD
KYQDNGRVTFTYFGDGAANQGQVYETFNMAALWKLPVIFVIENNQYAMGTAQKRSTSSPDIYTRGEAFGI
PGETVDGMNVLSVKEAGEKAVAHCRAGKGPYILEVKTYRYRGHSMSDPAKYRTREEVQKVREQSDPIEMV
REMLLSGKHATEDDLKAIDKEIKEIVNQAAEFSKESPEPSVDELWTDIYA
>gi|56697104|ref|YP_167467.1| pyruvate dehydrogenase subunit beta [Ruegeria pomeroyi DSS-3]
MATEILMPALSPTMEEGTLAKWLVKEGDTVSSGDILAEIETDKATMEFEAVDEGIVGKILIAEGTEGVKV
NTPIAVLLEDGESADDIASASSGAAAPSSAPVAAPAEKAPQGAAEAPAAPPVDLSPDWPADAPMKSQTVR
EALRDAMAEEMRADEAVYLMGEEVAEYQGAYKISQGMLDEFGSKRVIDTPITEHGFAGIAVGSAFGGLKP
IVEFMTFNFAMQAIDQIINSAAKTLYMSGGQMGCPIVFRGPNGAAARVGAQHSQDYAAWYMQIPGLKVAM
PYSAADYKGLMKTAIRDPNPVIFLENEILYGRSFDVPQIDDLAIPFGKARIWREGTDVTIVSFGIGMQYA
LEAAERLATDGISAEVIDLRTLRPMDLPTVINSVMKTNRLVTVEEGWPQGSVGSYIASEVMQQAFDYLDA
PIITCTGKDVPMPYAANLEKLALVTTDEVVAAVKQVTYR
>gi|56697105|ref|YP_167468.1| branched-chain alpha-keto acid dehydrogenase subunit E2 [Ruegeria pomeroyi DSS-3]
MPTEILMPALSPTMEEGTLAKWLVKEGDSVSSGDLLAEIETDKATMEFEAVDEGIVGKILVPEGTEGVKV
NTPIAVLLDEGESAGDIASASSGATAPSSAPAAASAEKAPQGAAEAPAAAPAAPKAADGARVFASPLARR
IAADKGLDLSQIAGSGPHGRIVKADVIGATAPAAAPASAAPAPAAAAAPAAAPSGPGADMVARMYEGREY
EEVKLDGMRKTIAARLSEAKQTIPHFYLRRDIKLDALMKFRAQLNKQLEGRGVKLSVNDFIIKAVANALQ
QVPDCNAVWAGDRVLKLKPSDVAVAVAIEGGLFTPVLKDADMKSLSALSTEMKDLATRARDRKLAPHEYQ
GGSFAISNLGMFGIDNFDAIVNPPHAGILAVGSGVKKPVVGADGELTVATVMSVTMSVDHRVIDGALGAQ
LLQAIVDNLENPMVMLA
>gi|56697106|ref|YP_167469.1| hypothetical protein SPO2243 [Ruegeria pomeroyi DSS-3]
MEHRSGKSSRRVEKERTGNFYGHKTFEVDWRLHLKLFVQKIFAISLAVFAMSPAMARQLCLKPLPADRSV
EVSEFGLPSVSKLLSVPDFDQPFLDFGMGSKTILTVADGKLRDFTEAPMSSWNRLFPTIISQNDDTTWAY
TNVRPALFLLDPETSTFVRHPISDTPGLRGFSHPDWRREHEDRTIDRRNQGDGPIYAYVGDKLFKIVAGE
LEEATVPPTWTASDSVPIDFPGVGVFAHVKGQIWFRRSDAQEWHMIASIKDLLSLHSQSPFSIFQVRYEQ
ETGSIWVMLEDRVLVGRLEQDSIAPELDYQFAGGVILHPPSGKILVWAGEALTDQGNDSPRPISGSPGLW
EMSAVAPTRVPGFQAQPRLSNTVPLLSTLFHDPTQTTIVSHAGGFAAFDGESLRDLAELTPEGDRKPFLR
KVAGRYFMRSWDWLAEITDDLDLRPIPLPQPVEQRVELLFSPKLKTFILHSAGWETVFTSTDLVSFHEVQ
GDGTTIIGVIGEMPGEAAVLANSKHQVFLIQYCE
>gi|56697107|ref|YP_167470.1| hypothetical protein SPO2244 [Ruegeria pomeroyi DSS-3]
MCHHQQGNHDCDVSFNVLSNKHFESEFDRLITQNGLLEGPVCGHCGARYLDQPGNFIFNGSHGKIPAGKN
GRKAKPAGFRVIHKPCKGKAGARFTVSLDHQQQEKMHDNVRLLRALVNGARITALRKLLVDPDTGKKCGV
ERVYNRIFWLEKNLLAFERAKLKEWRDKTEAQGGHPHMRIAHDDVVIGVNWESRSDRRLTPLQCSVSADI
DTGYVFRIDANFDTTVDPVQVVQENYLDDQLMPTNVRQAYAQKSGNNFTVPSMHFQRPTGRFEEAALFAS
AESHWRVFSLRLDKEYAAQGLAQLPQDDLDEIANANEHRKIFNTLRNGYFGFQETDRDSRGSFNGSVVKP
TYTKAAHLACLRDLLPAKRLTIVGEQEASMVRVVPHVFRDWIQEDRFEWHVMHFDKNASEPENSRRATAF
KTAFDIYKARAHASGQTQTSDHALLSQFCAGAMAPAFNRDPSGHMTPFPIINFRSVQFPQLWVRSGVEIH
GETREVVGFPVLRKKYRQKLKGSAFHVMPTDPDLCDALARRYIKATIHPVSSFMNSLRERVSPTKRARGR
SARNGPSYINGATFNPAVLVAFLNIYRINYNRFEERPYSSASARNSNQVAVSSGTQSIRRPGSKVKVKAP
KQRKLAPIQSTPAIRLGADARRMTSTTRATPDPRRILYRPWLNHGTPLWKKFETR
>gi|56697108|ref|YP_167471.1| hypothetical protein SPO2245 [Ruegeria pomeroyi DSS-3]
MSQSSECARPHRRGFDFCASAVFLCTQRAQSVGGCAMRGCPLLLWRPETCQNPAPFCRGFAAQGFTAVSV
VSRAVTKTTFFDENLIERVLWQFTMKEQRANAIPATCRYARYSANPTPTPRPVKINESDRTMNFEEKIAT
HYGHGNLTAAIRSGLQAQGITPEQASVEDLGPVDEFHIGGRAATVHFFDQIDLSETSKALDIGCGLGGAA
RYAAHSFGSQIEGIDLTPEYVETGGALCQWVGLSDKVNLSVASALSMPFESGDFDIAYMMHVGMNIEDKR
ALFKEVARVLKPGGTFAIYDIMRSNDEDLVYPVPWASSAETCCLAGPATYRAALEEGGFVVRQENDRRDF
AIDFFEKMKKANAGQKSPPPLGLHVLMQQTTAEKIPNMIANLQAGRIKPVEIYAVKQ
>gi|56697109|ref|YP_167472.1| cysteine synthase A [Ruegeria pomeroyi DSS-3]
MIFTTTGRGRLYGSILETVGNTPVIRLNTIAPGHVTMYVKFEAFNPAGSVKDRLALNIIEAAEREGRLQP
GQTVVEATSGNTGIGLAMVCAAKGYPLVITMHDGFSVERRRLMRMLGAKVVLTRKEDKAVGMVVKAKELA
EANGWFLAHQFETKDNADIHEATTAQEILGDFDGERLDHVVLGYGTGGTVAGLGRVLKAARPGLKITLSE
PANAALVQSGEAQQRNAEGEPAATHPAFNPHPIQGWTPDFIPLVLQEALDQGYFDALEPVSGPESIAWSK
RLAAEEGILTGISGGASLAAAMKVAETAPEGSVLLVMLPDTGERYLSTPLFEDIAAEMDEAEQALSASTP
GYQY
>gi|56697110|ref|YP_167473.1| serine O-acetyltransferase [Ruegeria pomeroyi DSS-3]
MMETRKKLAPVDPVWDRITAEAQDAVDREPLMGGLVHACILHHKNLDRALSYRISAKLCSNEMSMMVLRE
IVDDAYDSAPELIEAARADLMAVYERDPACHRLLQPILYFKGYQAMQAYRVAHWLWTRKRYDLAYFFQMR
VSEIFGVDIHPAARIGKGIMIDHAHSIVIGETAVVGDNVSMLHSVTLGGTGKEEEDRHPKIGDGVLIGAG
AKVLGNIKVGHCSRIAAGSVVLSEVPPCKTVAGIPAKIVGEAGCDQPSVSMDQRFPNGSD
>gi|56697111|ref|YP_167474.1| dnaK suppressor protein, putative [Ruegeria pomeroyi DSS-3]
MMGMVTELNEIALARFRAQIMAQLQELRETGAAGQAARAVVELDQQSVGRLSRMDALQNQAMAKAQQARR
EVEALRLTRALARIEAGEYGYCDSCGDDLPEGRLSLDPAATRCVSCARG
>gi|56697112|ref|YP_167475.1| hypothetical protein SPO2249 [Ruegeria pomeroyi DSS-3]
MRPVLHGDVSAAARALLNAPAGARRSLCRRLLSEAEMADAHVRATGRLHPLFGNGSLMSAARKRVLADEP
GFDDPGYCRCFEIVLSALIDRQVSRAHS
>gi|56697113|ref|YP_167476.1| hypothetical protein SPO2250 [Ruegeria pomeroyi DSS-3]
MATILLSAAGAAIGGSIGGTVAGLSSAVLGRAVGATVGRVLDQRLLGSGAEAVETGKVDRFRLTNSGEGH
AIAQVFGRMRVGGQVIWASDFVETSTTSGGGKGGRSQPKTTQYSYSLSLAVALCEGEIAGIRRIWADGDE
ISPEELNMRVYRGSADQLPDPVMEAVEGAGLVPAYRGTAYVVFEDLDLDRFGNRVPQFSFEVVRVDQPDA
DPGELGLAGLVKGVALIPGTGEYGLATTQVNYSNGPGSYWAANSNSPSGQTDLVTSLEAMGDELPGVGAA
SLVVSWFGGDLRCGECEIKPKVERKNIDGSNMPWRVSGLTRATVDEIARIEDRPIYGGTPADAAVVEAIR
HMNEAGQRVMFYPFILMDQLAGNTLTNPWTGEEGQPHLPWRGRITLSLAPTQPGTPDGSAAADAEVAAFF
GTASAADFVIGDGVVTYTGGEDWGLRRFILHYAALCKAAGGVSAFCIGSEMRGLTQIRGAAGFPAVQALR
ALTAEVRAILGPETKLGYAADWSEYFGYQPQDGSGDRFFHLDPLWADPEIDFVGIDNYMPLSDWRDGEEH
ADAQAGTRHIYEQAYLRANVEGGEGYDWYYHSPEAEAAQIRTPITDAAHGEPWVWRYKDIRNWWANTHHE
RIGGNRQALPTAWVPQSKPIWFTELGCAAVDKGTNQPNKFLDPKSSESSLPKYSNGARDDLMQLAYLNAV
LGYWDDPENNPVSIEYEAPMIDMANAYVWAWDVRPYPAFPNNRELWADGANYARGHWLNGRSGNRTLASV
VREICARAKVSAVDLGALWGIVRGYSVDQVSDARSALQPLMLCYGFDAVERDGKLVFRLRDGGRPIELDR
ALLAVHEEIDGALEHRRDSDLELSGRVRLRFVQADANHDVVAEEAVLPDDATHAVSSNEMPLALTRAEGR
QTVERWLAEARLGRDTIRFALPPSRLALGAGDVIRLPEAGDEIGGLYRIDRIEQAHMQLIEAVRIEPNVY
LTSDMADDSPVVQEFVPPVPVLPMLMDLPLMTGDEVPHAPHVAITAQPWPGTVAIYSSASDEAYRLDKIV
AARAVIGVTETPLARARPGLWDRGDAVQVKLVAGELESRPREAILSGENLAAIGDGSTGNWELFQFRDAE
LIAPDTYLLRNRLRGQLGSDALMPDVWPAGSQFVLIDPRVVQIDLASSERRIARHYRIGPARRGYDDPSY
VHRVEAFDGIGLRPYAPAHLRAVEIGSEVQLSWVRRTRIDGDDWDLPEVPLGEESESYLVRVIKDGSVLR
EEIVAAPSWTYEVAAQVADAVARPFDLSVAQVSARFGPGLFRSLTVEA
>gi|56697114|ref|YP_167477.1| hypothetical protein SPO2251 [Ruegeria pomeroyi DSS-3]
MTGRGGEVVAIARGWLGTPYRHQASTLGAGSDCLGLIRGVWRGLYGQEPEAVPAYSMDWSEPQGEERLWQ
AARRHLIESAQGPLALGEVLLFRMRGSSVAKHLGIVSEVGVSPRFIHAYSGHGVVESPLSAPWLRRVVSR
FEFPQEVS
>gi|56697115|ref|YP_167478.1| hypothetical protein SPO2252 [Ruegeria pomeroyi DSS-3]
MGGPSEAMQAHLASGVTTLCRCWAILRKDGVRFGFTDHDCMLEFDGFTFKADSGLTAAALEQSTGLSVDN
SEALGALSDAAVREEDIEAGRFDGAEVLSWLVNWAEPEQRWLQFRGSIGELRRGGGAFQAELRGLTDALN
QPLGRVFQKPCTAVLGDGGCRFDLDQPGYRAEIAVEQVEDGRVFRWTDLSGFEPGWFQRGRLDVTGGAAA
GLWALIKSDKVSAAGREIELWEPIRAALRPGDGLRLTAGCDKRMETCRLKFNNLLNFQGFPDLPREDWVM
ATPKRTGANSGGSLR
>gi|56697116|ref|YP_167479.1| hypothetical protein SPO2253 [Ruegeria pomeroyi DSS-3]
MNFHEVRFPANLSFGSIGGPERRTDIVTLVNGFEERNSPWAHARRRYDAGVGMRSLDDIETLIAFFEARQ
GQVYGFRWKDWSDFKSSLASAEPRYDDQVIAVGDGAETEFQLVKAYRSGTNSYARPIKKPVLGTVRIGLD
QDEMKEAVDYHVDLTTGLIRFEAPPPVGVEITAGFEFDVPVRFDTDRIQTSVASFRAGDVPNVPVVEVRV
>gi|56697117|ref|YP_167480.1| hypothetical protein SPO2255 [Ruegeria pomeroyi DSS-3]
MNGFDWPALMRAGMLGLRLTPEAFWRLTPAELRLMLGQGAGNAPMGRAGLDALLAAWPDQTQGEDHGGD
>gi|56697118|ref|YP_167481.1| hypothetical protein SPO2256 [Ruegeria pomeroyi DSS-3]
MTNPWTGEVALVIDGQQRVLKLTLGALAELEAELESGSLVELVQRFEGGAFSSRDVLALVVAGLRGGGAD
VTRAQLLRAEIAGGPLAAARAAAELLARAFMVPGET
>gi|56697119|ref|YP_167482.1| TP901-1 family major tail protein [Ruegeria pomeroyi DSS-3]
MGAQNGKDLLVKVDMNGTGLFETIAGLRATRVSFNAESVDVTSLESQGGWRELLSGAGVKSASISGSGVF
KDAGTDERARQLFFDGETPDFQVIIPDFGIVEGPFQVTGIDYAGSHNGEATYEVSLASAGALSFTAI
>gi|56697120|ref|YP_167483.1| hypothetical protein SPO2258 [Ruegeria pomeroyi DSS-3]
MSYGVAAALQTAVYQHLLADAGVAALVGTDIYDALPSGTLPQTYVLLGPEEVRDASDQSGEGAEHRFTVS
VISEAAGFAGAKTLAGAVSDALDDAALSLARGRLVGLWFDRASARRTGTGGAVRQIDLRFRARVEDN
>gi|56697121|ref|YP_167484.1| head-tail adaptor, putative [Ruegeria pomeroyi DSS-3]
MKAPHLNRRLLLETPARVADGAGGYAESWTALGTVWADVSARSGAERFEAGASRSRVSYRITVRAAPEGS
SMRPAPEQRFTDGARVFVIRAVAEHDPAGRFLTCFADEEVAA
>gi|56697122|ref|YP_167485.1| hypothetical protein SPO2260 [Ruegeria pomeroyi DSS-3]
MRSELMMLIEETAVADAALPVAQFKAHLRLGTGFAEDDVQDEVLRSFLRAAIAAIEARTGKILISRQFSW
TVYNWRDATGEVLPVVPVQMVTSVTLRDGGGQDTVLDPAAYRLERDSQRPRLRPAGALLPTVATGGAAIV
ALVAGMAADWGGLPADLGQAVLLLAAHYYEYRHETALGDGCMPFGVTSLIQRYRTVRFGSGVVQ
>gi|56697123|ref|YP_167486.1| HK97 family major capsid protein [Ruegeria pomeroyi DSS-3]
MSKTEIPALAGEGVPLVQEVKQAMTGFVNEFKGFRTEVETKLKQTEERMTMLDRKSLTAARPHLAAAVED
GAPHQKAFDAYLRSGDDDALRGLTLEGKAMSTAINSDGGYLVDPQTAERIKSVLHATASIRAIASVVHVE
ANSFDVLIDHTDIGAGWADETAAASETGTPSIDRISIPLHELSALPKASQRLLDDSAFDIEGWLADRIAN
KFARAEAQSFINGDGVNKPRGFLNHAAVDNDSWTWGNIGYVASGVAGGVDADDIVDLVYALGAQYRANGA
FVMNSKTAGTIRKLKDADGRFLWSDGLAAGEPARLMGYPVVIAEDMPDPATDSYSIAFGDFNAGYTVAER
PDLRVLRDPFSAKPHVLFYATKRVGGDVSDFAAIKLLKFGTV
>gi|56697124|ref|YP_167487.1| HK97 family phage prohead protease [Ruegeria pomeroyi DSS-3]
MDMDTGLEHKFARFGDGLTVSEDAVIEGYASLFGQTDQGGDNVQAGAYAASLKTLQAAGQRVKMLWQHDP
AQPIGVWDEVREDGRGLWVKGRLLESTQKGREAAALIRAGAIDGLSIGYRTRRASKNDKGQRLLTELELW
EVSLVTFPMLPSARVAAKGTSPEVEQTWRSIAELFDSARQELARR
>gi|56697125|ref|YP_167488.1| hypothetical protein SPO2263 [Ruegeria pomeroyi DSS-3]
MPMAEGPGYAPFDCAPGLRLEAHERVAALQHEHLCRRLDQLDEAIERMERRLWLTVYGVAGAILAQVFQS
FLVISP
>gi|56697126|ref|YP_167489.1| HK97 family portal protein [Ruegeria pomeroyi DSS-3]
MIFDFLRRGAGAEAPEAKASAAGPVVAWHNAGRVAWSPRDTASLTRTGFAGNPVGFRSVKLISEAAAALP
LVLQDRMQRYETHPMLSLIRRPNGAQGRAELMEALFGQLLLSGDAYVEAVRGADDLPIELHVLRSDRMRV
VPGADGWPVAYEYTVGGKSHRFDAASICHIKSFHPQDDHYGFSPMQAAAMAVDVHNAASRWSKSLLDNAA
RPSGALVWTGSDGQGVMAEDQFRRLSDEIEANFQGARNAGRPMVLEGGLDWKPMGFSPSDMEFQKTKEAA
AREIALAFGVPPMLLGIQGDATYSNYQEANRAFYRLTVLPLVTRVAANLSDWLSGLSGEEVLLKPDLDQV
PALAAERDAQWARVSRADFLTGAEKRMLLGLPALAEDADG
>gi|56697127|ref|YP_167490.1| terminase, large subunit, putative [Ruegeria pomeroyi DSS-3]
MAHQLPPEGDWRAWVILGGRGAGKTRAGAEWVRARVEGSRPLDAGRARRVALVGETYDQVRDVMVFGESG
ILACSPPDRRPNWKASERKLIWPNGAEAQAFSAQDPEGLRGPQFDAAWVDELAKWKKAGETWDMLQFALR
LGERPQVCVTTTPRNVKLLKDLLAAPSTVQTHAPTEANRANLAESFLEEVRARYAGTRLGRQELDGVLLA
DAEGALWTAEMLDRARTSSVPELDRVVVALDPSVSGGASGDACGMVVVGAQMQGPPQDWRAWVLADRTVQ
GAGPTTWAKAAIAAMDAFGAERLVAEVNQGGQLVEEVLRQVDPLVPFKAVHAARGKVARAEPVAALYEQE
RVRHVAGLTALEEQMGQMTARGYEGQGSPDRVDALVWALHELMIAPAAAYRRPRVRVL
>gi|56697128|ref|YP_167491.1| hypothetical protein SPO2267 [Ruegeria pomeroyi DSS-3]
MSGPGQSATQSSTARAWARKAGGIASTVWRAMVSKWLRSLRMSEIWRWRWREKSPNARQSQRNQSFVKNI
SALAVALLREGLDSPCGFVYKLCHARRDAQTAPGVTPVAVFSSLSCGDHSRMRSRAHMTLITPEERISRT
AELLQSLENSIRDLRNAAEDLQKRIRAGEDGDLAGYGKQMGQAASLIRECQKVEASFAEQVRREAGIAQG
GYALDLDRARSEIGCRLARLRKCCREGAVSE
>gi|56697129|ref|YP_167492.1| hypothetical protein SPO2268 [Ruegeria pomeroyi DSS-3]
MRSDLNHFETIARQTVDAMPPAFRAHARAVLLCVADWPGPDMLGPLGIDDPLELTGLYEGIPMTEKSVSD
FAAPPDTVWLFREPILAEWRDRGDIALDDLIAHVVVHEFAHHFGWSDEDIACIDEWWA
>gi|56697130|ref|YP_167493.1| hypothetical protein SPO2269 [Ruegeria pomeroyi DSS-3]
MEDLISKTVAVFVRSFTLPGFGETLPAGEYEIETELVSPPGHLDREAWKASVLVKLHARASHPGLARTLS
VSLADLDHARARDKLTGKAVSDLFLEDMLADPMVRLVMAADGVSEAHLRHLYSDARTPRLYTGVLDAGVD
SQRARDKMAIQVAENEGLPTRLQQAHGRVQAGEV
>gi|56697131|ref|YP_167494.1| hypothetical protein SPO2270 [Ruegeria pomeroyi DSS-3]
MWRALASNMLTVLAVGLFLLAGVILWGKSQYTAQGPLDEAICLQVKSGSNMTRVSRDLEASGAVSSGAMF
RISARYSEKATQLKAGSYLVKEGASMEEIIDQITRGGASSCGTEIVYRIGVNRLLLEVRELDPATEQFVE
LVEFDPSEGEAPAVYAEKRAERDTRYRLAMAEGVTSWQVVEGLKAWDVLAGEVDELPREGLLAPDSYDVT
VGMERAALLAQMQEKQELRINAAWEARVDGLPLQSREEMLILASIIEKETGVPEERRQVASVFVNRLDRG
MRLQTDPTVIYGITKGKGVLGRGLRQSELRGVTPWNTYVIEGLPPTPIANPGLASLEAAVNPDTTDYVFF
VADGSGGHAFAETLDEHNRNVAKWRAIEAQQQGN
>gi|56697132|ref|YP_167495.1| 3-oxoacyl-(acyl carrier protein) synthase II [Ruegeria pomeroyi DSS-3]
MRRVVVTGLGLITPLASGVEETWSRLLEGQSGAGPITRFDAVASGVTTTYACEVPRGDGSDGTFNPDDWM
APKEQRKIEDFILYSIAAAEMACKDANWLPEDEEDRLRTGVLIGSGIGGLGSIAETANLIKEKGPRRVSP
FFIPGALINLASGQVSIRHGFKGPNHSVVTACSTGAHAIGDASRIIRAGDADVMIAGGGEACICEIGIAG
FNACKALSTKYADNPKAASRPYDADRDGFVMGEGAGIVVLEDYEHAKARGAKIYAEVLGYGMSGDAYHIT
APSETGDGAERSMRAALRSAGLEPSDLDYINAHGTSTMADTIELGAVERLLGNHAANVTMSSTKSATGHL
LGAAGAIEAIFSILAIRDQVAPPTINLDNPAVETPVDLAPNAKRARKIDVALSNSFGFGGTNASVIFGKA
D
>gi|56697133|ref|YP_167496.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase, putative [Ruegeria pomeroyi DSS-3]
MIIYPTMELQNGRCVTLERGRLDAPMLWHVDPFETVSGWASAGAEWMHLTDLDAVAGTSGNAELVEQIIR
KAEIPVQLAGGMRSRERIEHWIDKGAGRIVIGTLAARDPELVKELAKRHPDQIVLSVDVWQGHVMTDGWR
SQSAYTPEAFIDAFADVPFAAIVVTDIDSDVEEVEAKLGLISGLAAHSRTPVIASGVVRGADDISRLAYV
PNIAGALVGRALFRKSLSLEDALSIAASAHERVAQFQ
>gi|56697134|ref|YP_167497.1| acetyltransferase [Ruegeria pomeroyi DSS-3]
MIRSIPILNTGRLRLVGMRPEDFDRYAEIWADEQVVRHIGGKPRSRGECWDAFLRNEGHWHMTGFGQWGV
VLQKTRRLVGQAGFFYSSRDMGPDFDAYPEAGWVLAPEAQGQGLGREAVAAAHDWFDRVIPGRLVAMIAP
DNTPSLGLAQSLGYRPMREAEFGGRPVTLLRRDGPPARR
>gi|56697135|ref|YP_167498.1| acyl carrier protein [Ruegeria pomeroyi DSS-3]
MSDVADRVKKIVVEHLGVEEDKVTENASFIDDLGADSLDTVELVMAFEEEFGIEIPDDAAETIQTFGDAV
KFISEAS
>gi|56697136|ref|YP_167499.1| 3-oxoacyl-(acyl-carrier-protein) reductase [Ruegeria pomeroyi DSS-3]
MFDLTGKNALITGASGGIGGAIARALHAAGASVVLSGTRVEPLQALADELGERAHVLTCNLSDMAAVEAL
PKQAADLLGSVDILVNNAGITRDNLFMRMSDDEWQSVIDVNLTATMKLCKGVLRGMMKARWGRIVNISSV
VGAIGNPGQGNYAASKAGVVGMSKALAYEVASRGITVNAVAPGFITTAMTDKLTDEQKSGLLTQVPAGRM
GSPEEIAAAVLYLASPEAAYVTGATLHVNGGMAML
>gi|56697137|ref|YP_167500.1| acyl-carrier-protein S-malonyltransferase [Ruegeria pomeroyi DSS-3]
MTTAFVFPGQGAQTIGMGKALAEAYPAAQAVFDEVDAALGEKLSALIWEGDIETLTLTQNAQPALMATSM
AAMRALEAEGVAITQAAFVAGHSLGEYSALAAAGALSVGDTARLLRTRGQAMQSAVPVGQGAMAAILGLD
LAAVREVAAEAAQGEVCQAANDNDPTQVVVSGAKAAVERAAEIAKAKGAKRAVMLPVSAPFHCALMQPAA
DAMAEALAAVEIKAPAVPLVANVRAEAVSDPDLIRQLLVEQVTGSVRWRESVEYMAAQGVTEIWEIGAGK
ALSGMVRKINREIACKPAGTPEDVQKILAGDA
>gi|56697138|ref|YP_167501.1| cytochrome, putative [Ruegeria pomeroyi DSS-3]
MTLTNTPHSYGGVAKGLHWLTALLIVTLLPLGWVADQAAGRATAGGAGAEEIARAAWLFSAHKTLGIALF
AVALLRIFWALTQKRPGLLNADHRAEALAAETVHWLLYGALVLVPLSGWIHHAATEGFAPIWWPLGQSLP
MVPKSAALAELTAVLHRAFLLVLLGALALHVAGALKHHLIDRDATLRRMLPGRIDLPMPPKQVHSAAPLL
LALLVWLGAFGAGAWVNTHSAPHAPAEVQRTALAPVASDWQVSEGTLAITVTQLGSAVSGSFADWTAAIR
YDPRETPGPTGEVTVTIAIPSLALGSVTAQAMGADFFDAAQFPTADFTATLHRTETGHEARGELSLRGAS
VPLTLPFDLELDGDTARMRGTVTLDRRDFGIGANMPDESSLKFPVTVDVSLTATR
>gi|56697139|ref|YP_167502.1| hypothetical protein SPO2278 [Ruegeria pomeroyi DSS-3]
MTTNGEIFSMKRLTRLVVANELSNNHHMRKIHRLFGRVFIEDVFTPRGPVNRKMYINRGQVEDDLARSAN
DTLHIIIFGNSGCGKSWLYKKVFKEKGIFFLTVNLSGASSQQSIAKELVSTVGRRNGTGRVKKAKSHGFS
WFITYSETEELSTELDGHDAFLNALKHCRKLAGRRPAFLVFENLELIFEQRDLLRELGNIIALLDDDQFA
KFDVRIAIVGTPSNIRNYFRSVPRLETIANRLIELEEIARLSDEDVARFVERGFRTLLKYREETNAVNYL
IRRAITVTRGNAQRLHEFCKEVALQGQQDRFLSLERIEKGEREWLRRRFHINQTTVASWIVDPARETALM
GQYLKDGYVSDLLLQNLYLCALGLVKEDEFTVQDVTELIQDELSAHPVTQKVLRKLEGQIAMRTGSMLAK
LADDINGASHPILDRFEPPSGNRIFRFRDMQYQMCLSSMFNVFDNGRRVEINHPSWVSSTDDAQQRTSVE
>gi|56697140|ref|YP_167503.1| hypothetical protein SPO2279 [Ruegeria pomeroyi DSS-3]
MKSTRLAAALILAGLASAATAAPEKYLLDSSHSQVVFSYNHLGYSTTTGMFSGFEGEIMFDKEDPAASSV
TVSMPVLSMFTGWQAREDHFFSGDFFGAKDGDMITFASTAIEVTGETTAKITGDLTMNGVTKPVVLDAVL
NQMGDHPMAGKPWAGFDATTTVVRSDFNLGKFAPFVGDEVELRISVEAMKAD
>gi|56697141|ref|YP_167504.1| hypothetical protein SPO2280 [Ruegeria pomeroyi DSS-3]
MKGWPHIHACAAGARGLVRSHLWPHAQVAHDQVPLNYPEPAAFPSQCLSNVNPAGHNPAENLAQGARPDM
HVAQQQTLRNRMPLPSFEETVPLMITFAPNWPLRTVIFRVIGTALVIGAASMWLLPGSNNGADAALMKLG
VSLFFFFCGLALLMIHHQDNQPDAYFDPIRREVRVLQKNNRGRPQTILRRSYDSLGAARFNEHYLEICDV
DGSILMRLPIPSAEIRQALRSQLSGFVTIPT
>gi|56697142|ref|YP_167505.1| 30S ribosomal protein S6 [Ruegeria pomeroyi DSS-3]
MPLYEHVMIARQDLSNTQAEGLIEHFGAVLSDNGGSLVDHEYWGVKTMAYKINKNRKGHYAFLRTDAPAS
AVQEMERLMRLHDDVMRVLTIKVDEHAEGPSVQMQKRDERDSRRERR
>gi|56697143|ref|YP_167506.1| 30S ribosomal protein S18 [Ruegeria pomeroyi DSS-3]
MAAKPFFRRRKVCPFSGDNAPKIDYKDTKLLQRYISERGKIVPSRITAVSAKKQRELARAIKRARFLALL
PYAVK
>gi|56697144|ref|YP_167507.1| 50S ribosomal protein L9 [Ruegeria pomeroyi DSS-3]
MQVILLERVAKLGQMGDVVDVKSGYARNFLLPQSKALVASDANIAQFEAQKAQLEARNLETKQEAEALAV
KLDGQQFVVIRSASDAGALYGSVTPRDAAEAATEAGFSVDKKQIALIAPIKDLGLHTVAVRLHPEVEVSI
NLNIARSPEEAELQASGKSIQELAAEEEAAAEFEIAELFDDLGGAASDDDDQAPASDETA
>gi|56697145|ref|YP_167508.1| transglycosylase SLT domain-containing protein [Ruegeria pomeroyi DSS-3]
MQFTRRALLLTGLALPVAACGREPEPAATFNPPLYPNETPELRAAINRWADHYELPRNLVHKLAIRESTH
RPWAVNRPYYGLLQILPATARTMGYRGGPEGLLDADTNLQYAGKYLRGAWLLADGSQDRAIQLYASGYYY
EAKRRGMLVETGLRPAS
>gi|56697146|ref|YP_167509.1| DNA-binding protein, putative [Ruegeria pomeroyi DSS-3]
MDTVDTVVGRRIRARRSALGLSQAELGRAVGVRFQQVQKYESGANRVSASRLWAIAEVLDVHISHFFEGI
QAPDSGVIDGSDAPVDRLMFLQDRDSVEMVEIYSSLPPAQKRAVLAFVRTMAVDTQMSGEKVPG
>gi|56697147|ref|YP_167510.1| autoinducer-binding transcriptional regulator LuxR [Ruegeria pomeroyi DSS-3]
MDIVDLGTLPKSEAVYSDFLLQVREKLEMDHAAYAGLNPAAGAIHGYVTYSDEWKLHYQEQGFHMIDPTL
HMSQRSIAPVDWSRLERSNDFRRVFRDAHDFGIGDQGLTIPVRGPYGDVGLLSVTRECSTEEWQKLVRHV
IGDLQSLAVHIHDTVMSSDMLGRILYHPSLSTREVEILQWVAAGKSQQDIGDILSISHRTVEVHLRSSRE
KLCALTTAQAVGRAVGLGLIYPG
>gi|56697148|ref|YP_167511.1| autoinducer synthesis protein [Ruegeria pomeroyi DSS-3]
MIIVIDALNKHLFGGVLDDMFRLRARVFGDRLGWDVTIEDGKEIDRFDHLDPAYVVGLDDDGNVVAAVRA
LQTTGPHMLADVFSDILCGEPPIRSATMWESTRFCVDTQRLKRGKDRNSVSYATCELMIGSLEYARRAGI
SDIVTVIDPVMDRVLKRSDNAPYDYVGQTVPMGKVPALAALLDTGEERVNRVREFAGIIHDVFLSDEDAL
ALFNGAHGEQADQPVANADYSPTTPLERYLVEQLQAAGTEEEVKAVQGLIEALAGSLEPSRKQQLLNTPK
LVAREA
>gi|56697149|ref|YP_167512.1| trigger factor [Ruegeria pomeroyi DSS-3]
MQVTETLNEGLKRGYNIVVSAAELDAKVNEKLVEAQPEIEMKGFRKGKVPMALLKKQFGQRLLGEAMQET
IDGAMNKHFEDSGDRPALQPEVKMTNEDWKEGDDVEVAMSYEALPAIPEVDMSDIALEKLVVKADDAAID
EALGNLAETAQDFKARRKGSKAKDGDQVVMDFVGKVDGEAFEGGSAEDYPLVLGSNSFIPGFEEQLVGVK
AEEEKDVTVTFPEEYGAEHLAGKEAVFTCTIKEVKEPVAAEIDDELAKKFGAEDLAALKSQIAERLEAEY
AGASRAVMKRGLLDALDAKVSFDLPPSLVDAEAKQIAHQLWHEENPEVHDHNHGEIEATEEHTKLAERRV
RLGLLLAELGQKAEVEVTDAEMTQAILGQARQYPGQERQFFEFVQKNPQMQQQLRAPIFEDKVVDHIVAQ
AKVTEKEISKDDLQKALEALDAE
>gi|56697150|ref|YP_167513.1| hypothetical protein SPO2289 [Ruegeria pomeroyi DSS-3]
MTFARVAPRSSDATRAPRPGALIWKSDPSPPHQRARNLRFIHLMGKKMITTLRTTSALALAAAALAAPAS
AQLLYENQSGGSVRLYGQFNPALISVDDGQQTETQIRDNDLSRSRIGLRLAQPFGDNTFRFRFEAGLGLP
NSTETNQLGDNFSGWTRDDLRHIDFSLEGDWGKVSLGQGSMAADGIAESDLSYVGVALYSYLADANAGFF
FRDTAGVLSGPAVGDALDTFDGSRRGRIRYDSPEIAGFTFSAAYGENILNTADQSDYYDAAVRYSGEFAG
GVQLDAGLAYQVRDNNGVDRSDVVGSASVLLKNGLSFTFAGGTRDNDAAGATDPDYLYFKVAYDVDLFSF
GKTGVGVHYYDGSDFNVAGSETKGWGVGIAQRVEAYNTDVYFTYQDYEYDDAANSYQDLSTIVLGARWRF
>gi|56697151|ref|YP_167514.1| hypothetical protein SPO2290 [Ruegeria pomeroyi DSS-3]
MCVFAPISRKSDACPPLDRGRQAQGAVRGSEFPAGAEQERIHILIGSTRIGQFMRAISQIDLGVDAVEIL
VDAQADGFRLAPGQPEVIAVIVVDRKRGHARRKKLRLVPGQHIGIIAAVLAAAGGQGKVQARLELDRDRA
KGVVTIDATAVAARKADTALDLGSVELACVFQRDVIVFVAVARGQHIGARSERDRETVEAGRVIAHPALT
PAIQVGHDRADGDPRQRTAGGAELEAARKIADTVIGGHAVVVQRDVRNPVAGHRPLPHIDRAPALAGIGK
VDLAQVGPVPIGTLGCVCLADPTGGAQAKGGLEIELERALIHGLHHPQADAAVGMGVIDKAVLALHPVID
RLPGGRELSVNLDIAARGIVPLQFRRCRNGRHGSHQRDSRRCFDLSGHVISPFKRVGVSQVSIGDWIACF
QTSCRQAGFYWHFGNTES
>gi|56697152|ref|YP_167515.1| hypothetical protein SPO2292 [Ruegeria pomeroyi DSS-3]
MNAKAAPLAAGGVSYASPDVVPLPEVGFLAGTILLTQDGEMPVEFLSPGDRIITRDRGFVPLHHITRAPQ
SVRAIRIAAGSLGDTRPDCDLILPAGQPVLIRDWRAKALFGTAQAMVRADALVDGEFICDLGPREMQLFQ
LHFDSAHVLYAGGLEVAGQCLPAAGRLAA
>gi|56697153|ref|YP_167516.1| YjeF family protein [Ruegeria pomeroyi DSS-3]
MCRSESVKGQGMSELLTAAQMRAIEQAAIASGEVTGLELMERAGRGVVEAIFEEWPELGEAGGPTPQTPW
STSGEMKKAVVLCGPGNNGGDGFVVARLLHERGWAVEVFLYGDPEKLPPDARVNYERWCQAGEVQAFAKF
EPENWNWQTGEVGAVDLIVDAVFGTGLVRPVGSEMWLHEKIGVLTTEVVNARRVAIDLPSGLCADSGKPL
IDTQDETGRGKLKFELSVSFHREKVGHRISDGPAFCGRTVVKSIGLDDLPSSRAVARELASEIVRLAQPR
LSDKAAESHKYTHGHALILSGGSGKTGAARLAARGALRIGAGLVTLGVSPGAQQEVACQITALMLTRIEG
ADGFAAVLEDTRLNALCLGPGMGVERARDLVPVALNAKRATVLDADALTAYAGDPAELFALLHEACVLTP
HGGEFARLFPDIAKRLRKEPKSGPAYSKVDATREAAKRAGCVVLFKGPDTVIAAPDGRCSVNSAHYLRSA
PWLATAGSGDVLAGFVTGLLARGFAPMQAAETAAWLHVECALEFGPGLIAEDLPEQLPAVFRKLGV
>gi|56698713|ref|YP_167517.1| nitrogen regulatory protein P-II [Ruegeria pomeroyi DSS-3]
MKKIEAIIKPFKLDEVKEALQDIGVQGLSVVEVKGFGRQKGHTELYRGAEYVVDFLPKVKLEVVLDDDQV
DAAIEAIVSAAKTDKIGDGKIFVSTVEQAIRIRTGETGSDAL
>gi|56697154|ref|YP_167518.1| glutamine synthetase, type I [Ruegeria pomeroyi DSS-3]
MSKDAVLQLIKDEGAEYVDIRFTDPRGKLQHVTIVSDLVDEDFLEEGFMFDGSSIAGWKSIEASDMKLMP
DTESAYVDPFYAEKTICIHCSVVEPDTGEAYDRDPRGTAVKAEAYLKASGIGDVAYMGPEAEFFLFDDVR
FSNTINKVSYEVDATDASWNSDAEFETGNMGHRPGLKGGYFPVNPIDEAQDLRAEMLSTMKRMGMKVDKH
HHEVASCQHELGLIFGTLTKQADEIQKYKYVIHNVAHAYGKSATFMPKPIYGDNGSGMHVNMSIWKDGKP
LFAGDKYADLSQEALYFIGGILKHAKTLNAFTNPGTNSYKRLIPGFEAPVLRAYSARNRSGCVRIPWTES
PKAKRVEARFPDPSANPYLCFAALLMAGLDGIKNKIDPGEAMDKNLYDLPAEELADIPTVCGSLREALEC
LASDHDFLLQGDVFTKDQIEGYIELKMEEVHKYEHTPHPVEFGMYYSC
>gi|56697155|ref|YP_167519.1| hypothetical protein SPO2296 [Ruegeria pomeroyi DSS-3]
MRLTVRSLPLRPALARPALSLALSLALALLTSPALALTCGNTGAGFEAWKAEFAKVARRQGVGKRGLDAL
AQARYATRTIAADRNQKSFKYSLEKFMQVRGADTIVAQGRKRKARNPEFYAALERQYGVPAGILIALHGM
ETAFGSFMGDSAVVSAITTLAYDCRRSDFFIPHALAALELVDRSAITGATKGAKHGELGHTQFLPGNALT
YGVDATGDGRVDFYDMTDALASTANFLRQKGWQPGRGYQPGEPNFAVIKQWNAASVYQQAIAIMARRIDS
>gi|56697156|ref|YP_167520.1| hypothetical protein SPO2297 [Ruegeria pomeroyi DSS-3]
MEDVTVAQTGKYHGGLVFLVNEDGAMDRFSRIVSATLEDYGHAVDRQTLLNEYEARILSSQFLVRLSLQT
AVEDGSRARRVDAAAGLNNRLHESKEKVRNRLVISLTPVSEQTDDRDVTELMLVVMLYRMVDLYTSELIE
WLDPNVRLTVDQFLGAFANVSPRRVRSRQQILYHQGNRFAPIDDTAPDLASRYDTIVGQYPHEGETGLVA
LTDQEVLALAFRSDPRPDELDGLSPEEQAQSDIRRLATWGMTGCLVFVSAPIAVSLAAVNLIRGEDFRLN
TQVLSLTAGLVFFQSSGALANVLSLLPI
>gi|56697157|ref|YP_167521.1| hypothetical protein SPO2298 [Ruegeria pomeroyi DSS-3]
MTEILQQTLPYDIHAPRPLPGIAPLDPADWLHRDEAFAGQMARREALMTDRPEAVLALDEGARAAALELL
DLVQGLAYPGTGAQVTRPDGVRVTVDRADPLRSLGRLVQEDFCILQKQGDEHVLTGAVLCFPASWTLAEK
FMRPLIAIHEPVGSYDAGIARRVQRLFDGVQTGRPLWRFNALWYAEAELHQPRSIHDRRSAPVPADAGYL
RSERQCILRLPETRAVVFSIHTYVLARGDVPLARA
>gi|56697158|ref|YP_167522.1| M24 family metallopeptidase [Ruegeria pomeroyi DSS-3]
MREHRWKRLTRAIVDRGYGGLLMFDPLNIRYATDSTNMQLWNTHNPFRAVLLCADGYMVIWDYKNSPFLS
TFNPLVREQRSGADLFYFDRGDKVDVAADVFSNEVRVLIEAHSGGNRRLAVDKIMLHGLRALEAQGFEIM
EGEEVTEKTRAIKGPDEILAMRCAHHACESAIAEMERFARANVGDGKTTEDDIWAVLHAENIRRGGEWIE
TRLLASGQRTNPWFQECGPRITQKNEVIAFDTDLIGSYGICIDISRSWWIGDQAPRPDMIYAMRHAHEHI
MTNMEMLKPGVMIPELTANCHRLDDKYQAQKYGCLMHGVGLCDEWPLVAYPDKAVAGAYDYALEPGMVLC
VEACVGEVGGDFSIKLEDQVLITEDGYENLTRYPFDPALMGQA
>gi|56697159|ref|YP_167523.1| hypothetical protein SPO2300 [Ruegeria pomeroyi DSS-3]
MTHSAITPAPALSRPGPLFALALALAVGFALGQVWPEPQDGISAVAPLQEDWHGNVKRSTWPD
>gi|56697160|ref|YP_167524.1| osmC-like family protein [Ruegeria pomeroyi DSS-3]
MPTERITFAGHDGSQLAARLDLPQGPVLATALFAHCFTCSKDIPAARRIAARLAAMGIAVLRFDFTGLGH
SEGEFANTTFTSNVGDLAAAARYLAGRDMAPALLIGHSLGGAAVLRARAQIASVRAVVTIGAPADPGHVA
HHFETALPRIQAEGAAEVCLGGRPFRIGRDFVEDIAASALQPAIADLRAALLVLHAPRDETVSIDNASQI
FMAAKHPKSFVTLDDADHLISRARDAEYAAEVIAAWAGRYVDLAPPAPPPGAPEGIVRVSEADPAGFLQD
VQAGPDHHALADEPLSYGGTDRGMSPYGFVSAGLGACTSMTIRMYARRKGWPLEGVSVDICHDKVHAQDA
DTGASGKIDAFTRVIRLIGPLDGAQRQRLLEIADKCPVHRTLEASSHIVTRLDEAG
>gi|56697161|ref|YP_167525.1| bioY family protein [Ruegeria pomeroyi DSS-3]
MSMTVLADAIGPREGTARLAKQAVLVVLGIAALAIAAKIKVPMWPVPITMGTFAVLTLGTAYGARLGLVT
MMGYLLVGALGFDVFATSSAEKFGLTYMMGGTGGYLVGYLMATVLLGALAARGWDRSFAKMALALVLANV
LIYVPGLLWLGQLYGWDKPILQWGLTPFLVGDALKLVLAAVLIPGLWKLVGNARG
>gi|56697162|ref|YP_167526.1| hypothetical protein SPO2303 [Ruegeria pomeroyi DSS-3]
MTLPQDIAEFVGDWLLDRVIDDRLAGQKLRAEGGATLRRSESGLTYDEQVTLFMPGQPPFHGTRRYLWRP
GPGGIAIHFEDGRFFHHLTLGQAEPGDHHDCPPDSYDARYDFGRWPLWRVRWSVNGPRKDYEMVTDFRRR
>gi|56697163|ref|YP_167527.1| hypothetical protein SPO2304 [Ruegeria pomeroyi DSS-3]
MAGPVGAGHRPSRIAGQGRSGNMRRFALILAAVPTWAVADGFMPLAGDEIRAALVGRVLVYEGGARQSFD
ASGGTVYVTDRPSLGQWSLRGDLYCSLWPPSDLWACYTVASDGDRVRFVGQGGDITDGTYAE
>gi|56697164|ref|YP_167528.1| adenylosuccinate lyase [Ruegeria pomeroyi DSS-3]
MIPRYSRPEMVAIWSPETKFKIWYEIEAHACDAMADLGVIPRENAEAVWKAKDVEFDVARIDEIEAVTKH
DVIAFLTHLAEHVGSEEARFVHQGMTSSDVLDTCLNVQLVRAADILLEGVDKVLAALKKRAYEHKDTVRV
GRSHGIHAEPTTMGLTFARFYAEMDRNKARLQGARDEVATGAISGAVGTFANIDPAVEEHVCAKLGLRPE
PISTQVIPRDRHAMFFATLGVIASSIENIAIEIRHMQRTEVLEGAEFFSMGQKGSSAMPHKKNPVLTENL
TGLARLVRMAVIPAMENVALWHERDISHSSVERGIGPDATVTLDFALNRLAGVVDKMLIFPENMLDNMNK
FPGLVMSQRVLLALTQAGVSREDAYTMVQRNALKVWEERVDFREQLLADADVVAALGTDGINEKFDMGYH
TKHVDTIFARVFGN
>gi|56697165|ref|YP_167529.1| hypothetical protein SPO2306 [Ruegeria pomeroyi DSS-3]
MRKGGSALHSSPISTGGEIMTLRTICCAAALALVPVASLAMGCSSRGHEQTQSCAPGMQWDAASQACVEV
INS
>gi|56697166|ref|YP_167530.1| hypothetical protein SPO2307 [Ruegeria pomeroyi DSS-3]
MRFPSLLALGLTLPLGAFAAGGDSTGGSTWTNPPKETQTTKECKGVKVWDDKKKRCVAPKNSGLDADTLY
DAVRELAYAGRPADAQGVLAAMPDQSDDRVLTYWGFTHRKLGDLDRAAFYYQAAIAANPDNILARSYMGQ
GFVEAGKTDLAIAQWREITARGGEGSWAEVSLREAIRSGLTYSY
>gi|56697167|ref|YP_167531.1| flagellar motor switch protein FliG [Ruegeria pomeroyi DSS-3]
MGGQPVADAPRRVPRQLSNLEKAAVVVRLLLNAGAEIPLEELPEELQARLTKQMGQMGLVDRITLDAVAE
EFAEALDGIGLSFPHGLAGALSAMDGKIAATTAARLRREAGVRQMGDPWQRLRALPPEELAEIAQAESTE
VAAVLLSKLDTAKAAALLGQLPGPVARRITYAISQTGRVTPEAVDRIGWSLAAQLDARPILAFADRPEKR
VGNILNQSAPATRDQMMSALDEEDATFASSVRKVLFTFTDIPARLSPRDVPAVVRVADQDQLILALAAAT
EGDEAAVAEFLLANMSTRMADNLRDEIRDKGKVKRSEGEAAMTALVGVIRGLADDGTLQLIDPDEDSED
>gi|56697168|ref|YP_167532.1| hypothetical protein SPO2309 [Ruegeria pomeroyi DSS-3]
MLSGPEFLQNSGNPPHGHGQAGSGALSASHVQHSTSPAPARLQMTATARQAIGFMVLAILCFSLMDASVK
ALAPRIGVIPALWARYAGQMLLVLLLVLPRLRRVMRTAYPRLQLLRSLMLMCATGFFFLGISRIPLTDAT
ALMSVNPVFITLGAALFLGERLGPRRLLGIALALTGALIVLRPGSDLFQPAALYPLGAATCYSTYALLTR
RVGPDEDVWTSLFYTGLVGTAVLSLIVPTHWQPPGPTAWGLIALVALFGTLGQLCLIRAFSQGEAAMLAP
YAYCGLGFAAIWSALFFGEYPDLWTILGALVIAGAGLYVWHREMHSR
>gi|56697169|ref|YP_167533.1| lipid A biosynthesis lauroyl acyltransferase, putative [Ruegeria pomeroyi DSS-3]
MPVEKSELSRGARASYYAQYLLLRGLIGGMRLLPYDRRIAAMGRLMSAIGPLVGFSKRIRANLELTCPDL
PEAEIARLCRAVPDNAGRAIMEHFSPDEFTRRQQGARVSGPGIAAFDAAIARGKPVMLITAHFGHYLATR
AALQARGGKPIGCLYRRMANPFFNEIYVDAFLRTGKPMFEQGRRGMMEMVRSLKQGGIIAIVSDLHAHGG
AELSFFGKPAVTSVLNAELALKYDAVLIPCYSVRQENGLDFEIVMHDPVAHTDPITMTQFLNDDLEKMVR
QHMGQWFWIHRRWKPWLDLGAQDEDVPG
>gi|56697170|ref|YP_167534.1| hypothetical protein SPO2311 [Ruegeria pomeroyi DSS-3]
MGSSTKTGGASIFVYHCTHGGARCGMQWYTYVSTGSRNLDWRCDRRGGKTGSSPCPAMDPTRMKALTLCL
ALAASALPIAARAEGPVVVELYTSQGCSSCPPADAIMHRLARRDDVIGLALHVDYWDYIGWADEYADPAH
TLRQQAYARAGGRSMIYTPQMIIQGVEDVVGAREEEVLALIEAHKARPAPVGIAARRVGDDITVTLTPGT
GAPGGPYAVQLVRYTPLRHASIRRGELAGREMDYANVVDSWQVVGQWDGRGERRLSLTATGDLPAVVLVQ
QAGPGPILAAARVD
>gi|56697171|ref|YP_167535.1| aconitate hydratase [Ruegeria pomeroyi DSS-3]
MPIKVGQDTAKTRRTLSVNGKSISYYSIPAATEAGLGDFSKLPAALKVVLENMLRFEDGGFSVSVDDIKA
FAEWGAKGGQNPREIAYRPARVLMQDFTGVPAVVDLAAMRDGIKALGGDAQKINPLNPVDLVIDHSVMID
EFGNPRAFQMNVDREYERNMERYQFLKWGQGAFNNFRVVPPGTGICHQVNLEYLAQTVWTDTDQDGVEVA
YPDTLVGTDSHTTMVNGMAVLGWGVGGIEAEAAMLGQPISMLIPEVIGFELTGQMVEGTTGTDLVLKVVE
MLRAKGVVGKFVEFYGTGLDRLPLADRATIANMAPEYGATCGFFPIDDKTLAYMRNTGRDEDRIALVEAY
AKENGFWRDADYAPVYTDTLSLDMGTIVPAISGPKRPQDYVALTDAKTAFTREMAETFKRPMGKEVAVKG
EDYTMESGKVVIASITSCTNTSNPYVMIGAGLVARKAAALGLNRKPWVKTSLAPGSQVVSAYLEAAGLQE
DLDKIGFNLVGYGCTTCIGNSGPIQKELSEAIAEGDLVATSVLSGNRNFEGRISPDVRANYLASPPLVVV
YALAGTLDIDLTSEPIGTDKDGNDVYMKDIWPTQAEIAELVDRTVTREAFQSKYADVFKGDEKWQAVETT
DAETYDWPATSTYIQNPPYFQGMGTEPGTISNISGAKVLAILGDMVTTDHISPAGSFATTTPAGKYLTER
QVAPREFNSYGSRRGNHEIMMRGTFANIRIKNEMLDGVEGGYTKGPDGQQTSIYEASMAYQEQGTPLVVF
GGEQYGAGSSRDWAAKGTALLGVKAVIAESFERIHRSNLVGMGVIPFEFTGGDNRKSLGLKGDETVAISG
LDTIQPLQEVPCTITYGDGSEKTITLKCRIDTAPEIEYIENGGVLHYVLRNLAKAS
>gi|56697172|ref|YP_167536.1| hypothetical protein SPO2313 [Ruegeria pomeroyi DSS-3]
MTESDRDQEASMREVVIVKSTPQRGKFNAFAELVGKLVSETRDFPGCLGAYLMLAPERNEQVVMHIWETP
DALEAYLTWRADRGDFLEINEYLEVEQDFKTYQLA
>gi|56697173|ref|YP_167537.1| DsbE subfamily periplasmic protein thiol:disulfide oxidoreductase [Ruegeria pomeroyi DSS-3]
MARISPLMVAPPLIFGAFVLLAAVGMFRDDPDALPSAREGQAAPPLVLTAFPGAPGFDDATLRDGKVKLV
NYWASWCAPCRAEHPSLEKLAGEGIPVYGINYKDKVENAQAFLDELGNPYAALGRDEQGRTALDWGLYGV
PETYVIAGDGTIMLRFAGPITARVIDSTIRPALEKAAAK
>gi|56697174|ref|YP_167538.1| heme exporter protein CcmC [Ruegeria pomeroyi DSS-3]
MTISTRLNALWEYANPRKFLALTERVLPALWVLTAITLVGGLVWGFFFTPDDYKQGSTVKIIYIHVPAAF
LATSVWFMMLVTSLVWLIRRHHVSALAARAAAPVGTVMTLIALITGAIWGQPMWGTWWEWDPRLTSFLVL
FLFYLGYMALWEAIEDGDTAADLTSVLCLVGSVFAVLSRYAVYFWNQGLHQGASVLRAGAVSGTDTEEKV
SNVYAYPLLLCLLGFGLLFVTLVFYRTGTEIRARRIKALIARERANG
>gi|56697175|ref|YP_167539.1| heme exporter protein CcmB [Ruegeria pomeroyi DSS-3]
MIALLKRDLVLAFRAGGGFGLGLAFFLIVTVLVPFSVGPQSALLSSIAPGVLWLGALLACLLSLDRLLAL
DWEDGTLDLLATAPLPLEAVVTMKALAHWLTTGLPLVLAAPVLGVLLNLPTAGFVWLVVSLLLGTPALSV
VGTFGAALTVGLKRGGLLLSLLVLPLYVPTLIFGAEVARRGAAGMEVATPLLMLAGITAAVIALLPFASA
AVLRVNLR
>gi|56697176|ref|YP_167540.1| cytochrome c biogenesis protein CcmA [Ruegeria pomeroyi DSS-3]
MTLTVTDLAIARGGIPVLEGLSFTLTPGRALILRGPNGAGKTTLLRTLAGLQPPLAGRIEGAEDKIAYAG
HSDGLKPTLSVTENLLFWAAVFGGRDITPALEGFALGDLADRHAGNLSAGQKRRLGLARLLVTGRPIWML
DEPTVSLDRDAVAMFADTVRAHLGQGGSALIATHIDLGLDAEVLDVGPYRARPAPLDDPDGDFL
>gi|56697177|ref|YP_167541.1| hypothetical protein SPO2318 [Ruegeria pomeroyi DSS-3]
MRLTEVTYSDARPVDGYGPGFFRVGGVVHHGALLTGPAGPGPWAGYQDASPLLALAGQVDVLFIGTGAEV
AHIPQPLRHSLEQAGFGVEAMTSPAACRTYNVLLGEGRRIALAALPV
>gi|56697178|ref|YP_167542.1| hypothetical protein SPO2319 [Ruegeria pomeroyi DSS-3]
MDPLFALSTPEIALLITAAFLAGCTRGFAGFGTALIYMPLAGVVLGPVAAITTLVLMDIVGPLPMLPRAA
RHVDRGDLARLLLGAMLALPLGLFTLFLLDPGVFRLLVSGVSLSMLAGLVLGWRYHGALRPGAVTATGAA
SGFLGGVAGLPGPPVIFVYMASAKPAAAIRANITFFLFGYDWMVLAMMGLAGRLDPAWIVTGLALIVPNM
LGTVLGTALFVPGYERAYRLAAYGLILFAALAGLPFWTLGE
>gi|56697179|ref|YP_167543.1| preprotein translocase subunit SecF [Ruegeria pomeroyi DSS-3]
MRLKLIADDTSFDFFSRWRIWLGISALLVLVGFASFLIQGLNFGIDFRGGTTVRTESTEAVDVGLYRGAL
DPLGLGDITITEVFDPTFGPDENVAMIRIQAQDEAEAVKSETIAKVQEALRSVAPDIKFVSVESVGPKVS
GELIQTAILAVTLAILAVLVYIWLRFEWQFALGAVAALVHDVVLTIGIFSELQIRFDLAIIAALLTIVGY
SLNDTVVVFDRVRENLRKYKQKDLKEVLNLSINETMSRTLMTSITTLLALVSLYVLGGDVIRGFVFAMIW
GIIVGTYSSIFVASTILLWLGVKRDWSKPTNTSGNQFADIDA
>gi|56697180|ref|YP_167544.1| preprotein translocase subunit SecD [Ruegeria pomeroyi DSS-3]
MLQIDTWKRVLIWLVCIGGLVLALPNAFYTRVEQSNDARAAIELRGETPELTATAAQWPDFMPSSLVNLG
LDLRGGAHLLAEVKVSDVYAARMDAMWPEIRNSLRDARDTVGTIRKQPSKPDEIRVKISQPEGMSRALEL
VRGLARPIQTLTGAGSNDIEVRGEGDEVIVTLSEAERLATDDRTVRQALEIVRRRIDEVGTREPTIQRQG
ADRILIQVPGIGSASELKEIIGTTAQLTFNPVISRGTDANARVGVGEKLAPSLDQEGVFYTIEAAPVVTG
EELVDAQPAFDQNGRPAVNFRFNTSGARKFGDYTRDNVGAPFAITLDGEVISAPVIQSHIPGGSGIITGN
FTVEESTNLAVLLRAGALPAGLEFLEERTIGPELGQDSIDAGKVATVVAFVAVLGFMWASYGLFGIFANI
ALIVNVGLLFGLLSVIGATLTLPGIAGIVLTVGMAVDANVLIFERIREELKTAKGPARAIELGYEKALSA
ILDANITTFITAVILFAMGSGPVRGFAITLGLGILTSVFTAIFVTRLLVVTWFERRRPKTIEV
>gi|56697181|ref|YP_167545.1| preprotein translocase, YajC subunit [Ruegeria pomeroyi DSS-3]
MQCHGSAHRFPEISRGCSPSLSTKECPMDGGAIAQFLPLILIFAIMYLLLIRPQQKKVKEHQAMVSALRR
GDQVITQGGLIGKVAKVKEDGEIEVEIAEGVKVRVVKSTIAQVLNKTEPAN
>gi|56697182|ref|YP_167546.1| mechanosensitive ion channel family protein [Ruegeria pomeroyi DSS-3]
MLRSLIVLLLTALMLAAPPALAQQTTPGDTATQPSLLAPVIVDGERLFVLRGASGLPAERRAAEVVERIE
TLADGSTATSVAITTKDSDFGIVILADGVEIVTVTPADASMERMQIETLVAVQSSAIRAAILNYRAARTD
SARRESAVQVLAWTAGFALFTILGIWLRRRLNRWCTRLVRRYFARLETATNAQVQADAIAALIRFGFSFV
LLALFFLGIYYYLSLVLLSFAETRYVAHLLLTYVTTPVLNIVFGFVSYLPNLITLVIIALITRYVIRGLK
VFFDAVEAGSFDLGDFERHWIGPTFNILRVLVVMIALVFSFPYIPGSDSAAFQGLTILVGAMLSLGSNSV
MNNIISGLFVIYRRSTSIGDRIRVGEHVGDVVQIKLMETHLKSIKNEMISIPNAQLLNSDVINYSKHIDG
NGLLVYTTVGIGYEEPADKVEAMLIEAAGRTKGLKARPAPFVLWAGLADYAVNYQINAYTTRGAIIPKIT
SDLHRNILDVFTENGVQIMTPSYVADPPEPKIAPAGWDGVLAHQRKES
>gi|56697183|ref|YP_167547.1| hypothetical protein SPO2324 [Ruegeria pomeroyi DSS-3]
MMMVRCYLAPSEIEGLGVFCHDDIARGDKVWRHDKMLDITFPESKLDSVEPHVKEFLERYSYPDINRPGY
LILESDEGRFMNHSMYPNLDFADGIWGVALTDIPAGTELTCDYADFLTGVIHMQPPRHKVTAPSVTFS
>gi|56697184|ref|YP_167548.1| seryl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
MHDIRAIRENPAAFDAALSRRGSAPVSSDILALDEARRGKILAAETAQADQNKASKEVGAAKARGDEAEF
ERLRALVAEKKAEIAAMQAEAKELDTQLSELLAGLPNLPAEDVPQGADEADNVELHRWGTPREMDFAPKE
HFDLASVQDGMDFETAAKLSGARFVLLSGAVARIHRALAQFMLDTHSEQNGLTEVNGPVLVLSEMMYGTG
QLPKFGEDSYQTREGWWLIPTSEVSLTNIVNGSTIAEDYLPRRYTAHSLCFRSEAGSAGKDTRGMLRQHQ
FEKVEMVSVTHPDHSDAEQKRMLRCAEGILEALGIPYRTIVLCTGDMGFGARRTYDIEAWLPGQNTYREI
SSVSTCGDFQARRMNARFKPADGGKPQFVHTLNGSGLAVGRCLIAVLENGQNADGSVTLPQALAPYLGGK
LTLNTDGTLN
>gi|56697185|ref|YP_167549.1| hypothetical protein SPO2326 [Ruegeria pomeroyi DSS-3]
MRAPRLLYIQCIVLDAGGKGSSDMTPVKDIEGVGPALAKMLAENGFDSAEAVAAVSVERLMELPRVGALR
AKAIHAAAQALVAAAKPAARGATPAPARKPAGRTPRTRRPVAGRAASGKKPASAVTKAATAPAAVPAPKA
APAKPAPSRDEASEAEIRAGEAAALAELAEADAKTKKKAKAAAKAAKAKQKKKDFEEKIRKAEEKVKKKS
GKKKDKKKDKKKAKKKAKK
>gi|56697186|ref|YP_167550.1| fatty acid desaturase [Ruegeria pomeroyi DSS-3]
MDLRTYTRQYAVQDNRLASLSYFGTFAVYFTALYLAITYVGHWYVLIPAGVVFAFAAVRLYVLQHDCGHH
SLFETRNQNEIAGHVLSPFTFAPFEVMKQNHNLHHAGVGNLEHRETGEIHTMTLREWQAAGWRQRLVYRL
YRNPFILIPLGAAFTYFIRYRWPKNATRFGARGVVLHNLSIVAFLTLLWALAGMTGFWVWLGFSFLGGML
GVFLVYLQHNFEDTYWDRRPDLDPQLAALQGSSALDFGWWFDTAVACITLHDIHHFNARIPSYRLRGCHY
NLPPEYAPRRIRFAEAVAALNLKLWDEEARCLVPFPKRAGRVAVVTG
>gi|56697187|ref|YP_167551.1| GTP-binding protein EngA [Ruegeria pomeroyi DSS-3]
MSLTLAIVGRPNVGKSTLFNRLVGKRLALVDDQPGVTRDLREGQARLGDLRFTVIDTAGLETATDDSLQG
RMRRLTERAVDMADICLFMIDARAGVTPNDEIFADILRRRSAHVILAANKAEGAAADAGVIEAYGLGLGE
PIRLSAEHGEGLNELYAVLMPLADEMEQQAEEQAPETDVDLDPEDEDGEEVAAPHAITREKPLQVAVVGR
PNAGKSTLINRILGEDRLLTGPEAGITRDAISLQIDWNDTPMRIFDTAGMRKKAKVQEKLEKLSVSDGLR
AVKFAEVVVVLLDAAIPFEQQDLRIADLAEREGRAVVIAVNKWDVEENKQDKLRELKESFERLLPQLRGA
PLVTVSAKTGRGLERLHDAILRAHEVWNRRIPTAALNRWLIGMLEQHPPPAPQGKRIKLRYMTQAKTRPP
GFVVMCSHPDKMPESYSRYLVNGLRADFDMPGTPIRLTLRGQGDKNPYKGRRKKNAGALAKHLKSRG
>gi|56697188|ref|YP_167552.1| PQQ repeat-containing protein [Ruegeria pomeroyi DSS-3]
MGSALLLLSACAEPEVILPGAREDIRPGATDAVVNQGRAIRLPAQQANSAWAQAPGTEAFRTAHPALRST
PQLVWSTPIGSGDEKRQRITADPVVAGGLIYTLDSAARVSGVTPGGGLAWQTDLVPPGEDEGQATGGGMA
YADGILYVSSGYGLLTALEAKTGTVRWQQKLNATGSGTPTIRDGLLYLVAGDDTGWAINIKDGRIAWQVQ
ATPSVGNVLGAPAPAMTPDLVIFAFGSGDLIGSFRQGGVRRWGASVSGQRKGRAAARIGDVTGSPVIQGK
TVYAGNHSGRTVAFRADNGERLWTATEGALGPVWPAGDSIFLVSDRSQILRLDASDGSVIWAQDLPGFIK
DKPKKRGASYAHYGPVVAGGRVIVASNDGYLRLYNPEDGAMISRVEVPGGATTGPVVAGNTLYVVGAKGQ
LHAFR
>gi|56697189|ref|YP_167553.1| hypothetical protein SPO2330 [Ruegeria pomeroyi DSS-3]
MRKKNAGSPPLGLPGGPGYERPEPEKVRTTGQGPGMSDTDSFIDEVTEEVRRDRMFLLLKRWGWIGGLAV
VAIVGGAAWNEYSKAQATAKAQGLGDAVIAALSANDAAARAEALGAITPDSTGGAAVLALLTAAADSGKG
DTAAAVARLETLAAQGDLPPVYRQIAAFKALLLQADTLPVSDRRQQFEALAQPGAPLRLLALEQLALIDI
AEGDTEAALARLQSIREDAEVSTDLQQRATQLMVALGADPAPLPSRQG
>gi|56697190|ref|YP_167554.1| RND family efflux transporter MFP subunit [Ruegeria pomeroyi DSS-3]
MSLRNGPGRVFPLGGIEERHIMRLVPFLTAILVTVTLYMLVFERDALMAFAKAESTTQAAPETPPAADPV
GAAIAETATIGVVVLRSQASEIDSAVVLRGQTRAMRQVEVRAETTSTVISEPKRKGSFVKAGDLLCELDP
GTRPASLAEARARKAQAESSMPEAEARLDEAKARLKEARINDNAAQKLAQTGYASETRRVATEATVRSAE
AGIKAAEAGLETSRASIEAAAAAVDAAQREIGRLTIMAPFQGLLESDTAELGSLLQPGALCATIIQLDPI
KVVGFIPETEVNRVQVGALAGAELATGLQVQGRVTFLSRSADETTRTFEVEITVANPELLIRDGQTATIA
ISSDGAKAHRLPQSALTLNNEGELGVRVVREGNKVGFVPVELVRDTPTGIWVTGLAEQADVIVVGQDFVT
EGVTVTPTWREVSE
>gi|56697191|ref|YP_167555.1| AcrB/AcrD/AcrF family transporter [Ruegeria pomeroyi DSS-3]
MTGIVDWAASRARMVLAFIAISLLIGGFAYVNLPKEGEPDIEIPMLFVSVSFPGISAEDSESLLVKPMET
ELADLDGLKKMSATAAENYAGVALEFEFGWDKTAITADVRDAMNTAQASFPDGAEQYTLTEVNFSEFPIV
IVNLTGAVPERTMARIAKDLQDDLESLDAVLEAGIAGSRDEMLEVIIDPLRLEAYNVTALELINVVQNNN
QLIAAGEIESEQGSFAVKIPSSFKTARDVYDLPIKVNGDRVVRLGELAQINYTFEDRKGTARFDGESTVA
LQVVKRKGFNLIDTVEQVKATVAKSRAAWPPELQAAVQMGTSNDQSRVVGSMVSQLEGSVLTAIALVMIV
VLASLGSRAALLVGFAIPTSFLLCFAFLAAMGVSISNIVMFGLILAVGMLVDGAIVVVEYADKRIKDGIG
PMHAYVEAAQRMFWPVVSSTATTLCAFLPMLFWPGVPGEFMGMLPVTLIFVLSASLVVALIYLPVMGGVS
GRISRVFNRMSDWLRARTPWWVRAALVPPALYGMFLGAMQLLNPAYLLPGGTLVGALLFLMSAFAASVTL
GAARIEMPQRRVAAPGGHTPFGHVIKFIAGNPVMPIVSILAVTFAVYQVVFVIFPERALGIEFFVESEPE
QATTYVRARGNLSLAEKDVLVRQAEEVIAAHPAVINVFSFAGEGGLDQNNGGAQAPADTVGQIQFEIIPW
EDRPTETHPLTGWLGSRMSAWLGFEEEVVAAEYDGDFVLEQLSNELAKLPGMVAEIEALGRGPASAKPVH
LRIKGDDWNTLLATTAQARAAFEETAGLIKIEDNLPLPGIDWQIDVDVAKAGRFGADVATVGAMVQLVTR
GVLLGEYRPADADDEIEIRVRLPEQDRVLSTLDTLKVRTPEGLVPLSNFITRKPVEKLAKINRVDQKRYF
DVKADVEPGLFKLTPDDDTQAVLAVLRTLPDGVAPTGEVVTRPADGAQFHIESLDGFDSAAAARNAVAAG
SVRFAPINANERIATLTQWLETDPFGPAVEWEWTGDQEDEKESQEFLLKAFVAALGLMFIILLAQFNSFY
NSVLVLLAVILSTTGVVIGMMVMGQPFSVIMTGTGIVALAGIVVNNNIVLIDTYQEYSRYMPRIEAIVRT
AEARIRPVLLTTITTMAGLTPMMFGLSLDFINGGYSIDSPTALWWKQLATAVVFGLGIATVLTLVVTPSL
LALRVWASTYLVMIWRGLARVTAGRSSRIARDMILRRSAKRLKATEIIWDPMQAEPPLIAAEQSLKAAE
>gi|56697192|ref|YP_167556.1| hypothetical protein SPO2333 [Ruegeria pomeroyi DSS-3]
MRHESQLSFPQRRAIVAKSCKDQGKKASSWGKRRGTTPMFNKTITAAGTALSALVLTATSAAAQTYDYYY
WWWGGWSYGGGGGTSSSVPEIDASTGALALAAVAAGLLLAREMRRRKSR
>gi|56697193|ref|YP_167557.1| CAAX amino terminal protease family protein [Ruegeria pomeroyi DSS-3]
MGCGRVTRIDPALRHQFYKLMVLFALEMLAIVLIFQVFSSVECRLTGIETACRALRSATIRILCVGIGLG
LFIWFRPNLRRRLVTAADTANGEARRWWAVHLIGLGLIFVPWLRADSASLNADFQAHLVTLLAGAVLAAI
GALFLLVPRREMSTLLRDGGGGLALVVLVAALIPDLADALAPLWWAFRGLILVTFYGVAVVLAVLGFHVV
LSPETATIGTEGFFVEMAGSCSGIEGFALTAGFFAIYSVLMRDTLRLGRFWLIVFPLALLVSWLFNVLRI
AVLIMIGARISPELAVNGFHSFAGWLFFTVLALGVIWVVQARPALHREAEVAEVAPESGARMPFREDPAA
ALIAPFIVFMLSGLLVQSLWQAPAQGYPLQAALMAAVLWLFRKPLLALDWRLDPVALLGGAVVGVGWILS
FRGGPAPEGVSQLTGAALTGWVLCRVLGTTLLVPVIEEGFFRGYLLQLLGGRSAWQTALAVGVTSLAFAL
LHGRVIEAGLAGLIFAGIALRRGRLGDAILAHAVANGLIALTALLTGDWSLI
>gi|56697194|ref|YP_167558.1| ABC transporter, ATP-binding/permease protein [Ruegeria pomeroyi DSS-3]
MMRRLAHTAPADQTASSERRSGLRTLRRVAPYLWPEGEGWVKRRVVAALAMLVLAKLIAVYTPILYKGAV
DALAGEGVPPLALGAVGLTVAYGVARMLTVGFQQLRDALFAPVGQRALRALALETFRHIHRLSMRYHITR
KTGGLSRIIERGVKGVEFLLRFMLFSIGPLILELVLVAAILMYLFDVWYLAVVVGTIALYIWFTFAVTEW
RVKLRREMNDQDTEANQRAIDSLLNFETVKYFGAEDREARRYDQSMQAYARAALKTSYSLAFLNFGQSFL
ITCGLIGVMVLAALGVQRGDLTVGDFVMVNAYMIQITVPLNFLGTVYREIRQALVDMGEMFDLLEQPAEV
SDKPDAAPLKVSGGEITLTDVRFGYEADREILKGVTLSVPAGQTVAIVGATGSGKSTIGRLLFRFYDVTG
GALCIDGQDIRDVTQTSLHDAIGVVPQDTVLFNDTIRYNIAYGRENATQADVEAVARAAQIHDFIASLPE
GYDTKVGERGLKLSGGEKQRVGIARTLLKNPPILLLDEATSALDTETEQEIKEALALAGEGRTVITIAHR
LSTIAEADKIVVLEKGEIVEQGTHDALLSRGGRYAQLWTRQQAGEDEAA
>gi|56697195|ref|YP_167559.1| lysM domain-containing protein [Ruegeria pomeroyi DSS-3]
MAGETGTAGLGGIGWAVVAGGVLVAGVAGLYFGGVIGGRQDPAVPVPVVANVPQVSEEKEENPAVAAVEP
TGEAKPDPAPEAAAAPASEPETTAEAATPEPEATAEAPSEAAPEAPAAAPAETAELPAALGAPVLDQIFV
EPDGTALLSGSAPAGARIAVLLDGAPLHEFEVPRDGKFAEFLTVPFSAAARALTLRAARDGQEALSGDYI
VAALPAPQPVEVAEATPEAQPEPVEVKPEAQPVETAEVAPAPAAAASDAEPAPATDTARAEASAADAAET
PANESAEAAAPAPAPAPEPVETAEAPAPAPQPTAPQETAEATAEPAVPVATEQAASEQPATDQTTTEQTA
EQQTAEAPQPAAAPEEPARVAVLRSDESGVELVQPAQQPETVEAQRVALDTIGYNDAGNVRLAGRANVGS
LVRAYFDNRAVADMTADALGKWRGEIGDIAPGVYTLRLDELDAQGVVLSRLETPFKREAPEVLRPAQPES
DPSAPQQPPVRAVTVQKGDTLWAISRERYGDGVLYVKVFEANRDAIRDPDLIYPGQVFTVPE
>gi|56697196|ref|YP_167560.1| decarboxylase family protein [Ruegeria pomeroyi DSS-3]
MTVKSVCIYCGSRAGAMPAYAEAARRMGALLAEAGWRLVYGAGDVGLMGEVARAAQAAGGQTFGVIPVHL
LRREVGKTDLSTFVVTETMHERKKVMIMNADAVVVLPGGPGSLDELFEALTWRQLGLHDKPILVMNVDGY
WDPLRALIERTVDQGFADASLADYLTWVDTPETAMAALRAALS
>gi|56697197|ref|YP_167561.1| RarD [Ruegeria pomeroyi DSS-3]
MDERGRGILAMIGTCLVWGLSPLYYKLLAHVPPPEVLSHRTFWSVLLFGVYLAMQGRLGELRRAYAGPRQ
TGLIALAAVMISLNWFVFILSIQLGHATEASIGYYIFPLIAVLIGRFWFAERLSGGQWLAVVLAALAVAL
LTWGLGVAPWVALILSSSFALYGAVKKFLPLGPVISVTAEIVIMMPLFLAVLAWFHLRGQGAFGGDLATS
LLLIGSGPLTAIPLILFSYAARRVPLSTVGVLQYINPTLQFMCAVVIFGEPFTRWHGMAFALIWGAVAVF
SLSLIRQDRAARRAAMAVSGVSTQVR
>gi|56697198|ref|YP_167562.1| enoyl-CoA hydratase/isomerase family protein [Ruegeria pomeroyi DSS-3]
MNEMSQDGLLGEVLSEGVLTLTLGRAPAHPLSRAMIAALHDALRRAMGDDHVHVLVIHGPGRIFCAGHDL
KEIGRHRADPDEGRAFVTDLFEACSALMLDLAHCPKPTIALVEGIATAAGLQLMAACDLAYASPAARFCL
PGVQNGGFCTTPAVAVSRVIGRRAVTEMALTGATYDADWALAAGLINRILPEAALATHVADLAGALAARN
QAPLRRGLETLNRHLELPLEQAYALATPVMVEHFMDPGRRHLDWID
>gi|56697199|ref|YP_167563.1| superoxide dismutase, Fe [Ruegeria pomeroyi DSS-3]
MAFELPDLPYAHDALASKGMSAETLEYHHDLHHKAYVDNGNKLIADTEWDGKSMEEIITGTYDKSAVAQN
GIFNNISQLWNHNQFWEMMGPGESKMPGELEKAIAESFGSVDEFKSQFSAAGAGQFGSGWCWLVKNADGS
LAVTKTENGVNPLCFGQTALLGCDVWEHSYYIDFRNKRPAYLTNFLDNLVNWENVASRM
>gi|56697200|ref|YP_167564.1| FkbM family methyltransferase [Ruegeria pomeroyi DSS-3]
MFTGLRKMAYRARGYYAGALNGEPFRLDPYHSKFWRRATAGGWEPETFAVLDQYLSPDRDYVDIGAWIGP
TVLYAARRARHVWCFEPDPVALRHLLWNLELNDIRNVSAFGVALSDGFGLARMASFGGEAGDSMTSLLAS
GNHGTEALTIGWDQFAQTVDLTDVSLVKMDVEGAEFGVVPTLSDWLRAHRPAFYLSTHAPFLEEAARPEA
MAGLARALEFYASATDEAGAPADLTAPEAQSRFCSFLFSG
>gi|56697201|ref|YP_167565.1| hypothetical protein SPO2342 [Ruegeria pomeroyi DSS-3]
MLKITTIALSLALPATSVLAKNDKVLSEEYICETKSYSNIGWIPPKICFAMDRSSGAAVVYDGYIKEIYG
DVIQADLKKRSDDLWEFRWELKDAHYSNSPGSTDVEYKATLNTRKASVNISAIHSGMDGDALRGQGKCER
GKKK
>gi|56697202|ref|YP_167566.1| hypothetical protein SPO2343 [Ruegeria pomeroyi DSS-3]
MSIKVDRKKLRTNMKMVATVIAAITGLAGMQASAAQAYDCKLDSNQDYGWIPPRVVFVVDEPNVQVMDGI
IAMVQEGPMAGKLERRDATSIQIEWSVKNIPVSNLRMKEHAVYTAVLNEKTGKVRLRAVLATQYSSYPKG
WGKCAIGKE
>gi|56697203|ref|YP_167567.1| sarcosine oxidase gamma subunit family protein [Ruegeria pomeroyi DSS-3]
MSKPVSALMGAAYDGIVRVEECGLQGMITLRGDLASKPVMAAATGATGQDMPGQRRAKVAGQSGLCWMSP
DELLVLVPHGEVGDKLAAMTKALGEAHSLAVDVSDARAMFRVSGAHSREVMAKLAPVDFAPGAFGPGDFR
RSRLAQVAGAFWMEEDGSFCIICFRSVADYVFKLLKVAAQPGSAVGAF
>gi|56697204|ref|YP_167568.1| sarcosine oxidase alpha subunit family protein [Ruegeria pomeroyi DSS-3]
MSTRLAKQGRLIDRSKQVTFTFNGTTMRGFQGDTLASALLANDQMMMGRSFKYHRPRGVVASGAEEPNAL
VGLGEGARFEPNQRATTTELFDGLKAASQNHWPNLDFDIGAVNTYLSRFLPAGFYYKMFIHPAPFWKHVY
EPIIRRSAGLGKAPDKELVDADTYEHFHVHTDILVIGGGVAGLQAAKVAASSGARVLLIEQTAHWGGRAP
VDGGTIDGLSPDEWVSRTLAELEAMDNVTLRARTMGAGVYDHGYALGYERVADHTPGVPGPRHRLWRIRA
KQIVSATGAIERPLSFAGNDVPGVMLAGAMRDYVVNWGVTPGQRVVVATNNDDAYRTAIILKQAGVDVLR
ILDARKEGGGALADEARALGIRVDPGKAIAKVKGGKRVKKISICNQDGVGGAREEVEADAVAMSGGWSPV
VHMWSHCGGKLIWDRANAHFRPDPDRPPLGADGKGYVVAAGSANGPLALDQVMADADAAGKAAAKAAGFS
PKRTKVPEGVATGENAMEAVWLMPANAEVQLRMKSWLDFQNDVKVSDVQLAAREGYESVEHTKRYTTLGM
ATDQGKLSNINGLAILADALNADIPQVGTTTFRPPYTPISMGAIGGEARGEVFQPVRKTPIYDWSNANGA
DWEPVGQWRRPFAYVRPGESVHDAVNREVKNTRENLGLLDASTLGKLIVKGPDAGKFLDMLYTNMMSTLK
PGKCRYGLMCSENGFLIDDGVVARIDEDTFLCHTTTGGAERIHGHMEEWLQTEWWDWKVYVANVTEQYAQ
IAVVGPKARKVLEKLNAKAGGGMDLSVEALPFMEWRDGRIGEFDARAYRISFSGELSYEIAVPASQGLAF
WEALVDAGKEFGVMPYGTETLHILRAEKGFIMIGDETDGTVIPQDLGLHWALSKKKDDYLGKRAQERSHM
ADRDRWKLVGLETVDGSVLPDGAYAVGEGVNANGQRNMIGRVTSTYYSANLGRGIAMGLIQHGPDRMGEI
VEFPGTDGKSYKAKIVDPVFYDKEGAKQNV
>gi|56697205|ref|YP_167569.1| sarcosine oxidase delta subunit family protein [Ruegeria pomeroyi DSS-3]
MLILTCPYCGVAADETELAAGGEAHLKRFGPGASDDELHGYLFSRENPKGVHLERWRHASGCGKWFHAAR
CTATLEVFGTYSAQVSGPPQEIRDAISAKRPGWSWREFS
>gi|56697206|ref|YP_167570.1| hypothetical protein SPO2347 [Ruegeria pomeroyi DSS-3]
MQSFRRKLCLPRSREGSVMAYSETLAETMRADLGVEPGLSEKKMFGGLCFLLHGHMVCGVTRDGAMYRPG
KAQEGAALALGAQPLSFTGRPMGGMVELDAGAFEDAALRSRLTEMSLAHAASLPPKEAAR
>gi|56697207|ref|YP_167571.1| sarcosine oxidase beta subunit family protein [Ruegeria pomeroyi DSS-3]
MLGGHGISATKSRTGSDSPMKHYSAFAVAREALRYHTGWERAWRSPEPKKRYDVVIVGAGGHGLATAYYL
GKNYGIQNVAVIEKGWLGGGNTGRNTTIIRSNYLQDPSAAIYEKARSLYETMSQDLNYNVMFSPRGVMML
AQTQHEIRGYKRTAHANALQGVKTEWITPERVKQLVPIINLHGPRYPVLGALWQERGGTARHDAVAWGYA
RACSAMGMDIIQQCEVTGVRREGGQVVGVDTTKGSIDCGKLGVVVAGHSGQLAEMAGFRLPVEALALQAL
VSEPIKPCMDVVVMANTVHGYMSQSDKGEMVIGGGTDGFNNFTQRGSFHHIEETVRALVETFPMISRLKM
LRQWGGIVDMTGDRSPIISKTPLGGCFINCGWGTGGFKAIPGSGWAMAQLMATGHSPLAEAFSLDRFKEG
RFIDESVAAGVAH
>gi|56697208|ref|YP_167572.1| cytochrome c-type biogenesis protein CycH [Ruegeria pomeroyi DSS-3]
MTFWILVTLMALTVAALLALSMLRARVAAEPAAAYDLRVYRDQLAGVDRDLARGVIDAGDAERIRTEISR
RILAADAQMRAEVEGGGQSLRKAGLGALLGAVVIVGGTMALYSRLGAPGYGDLPLQLRLDIAEANRTDRP
GQGEAEARIPAHPAPQLDPGYAELLGKLRDTVAQRPDDIQGQMLLAQHEANTGNFAAAYAAKGRVIALLQ
GDASPQDFTEQAEMMIRAAGGYVSPEAEAVLFEALRRDPEYGPARYYWGTMLAQIGRPDLAFNTWARTLQ
TAPAGTAWGEAIREQIGELAMRAGVNDYTPPAPPAGTALPGPRREDVEAASEMDAETRAEMIQGMVTRLS
TRLATEGGTPQEWGRLIGALVVLGDTDRARAILDEARQVYGESPEALVLIESAAQRAGLGE
>gi|56697209|ref|YP_167573.1| hypothetical protein SPO2350 [Ruegeria pomeroyi DSS-3]
MICETVEEFAAALPPFSALAGLDLGDKTIGVAVSDRMRGVATPLETIRRKKFGLDASALLAIVEQREIAG
IVLGLPRNMDGSEGPRCQSTRAFARNLSRLTEVAITFWDERLSTVAAEKALLEADTTRKRRSEVIDHVAA
AYILQGALDRLRNL
>gi|56697210|ref|YP_167574.1| hypothetical protein SPO2351 [Ruegeria pomeroyi DSS-3]
MSDMVWKRNEVDSPCIRICVVHPTERICTGCYRSIDEISRWSKMQPEERRAIMEELPDRAPQLRKRRGGR
AARQAQE
>gi|56697211|ref|YP_167575.1| type I secretion target repeat-containing protein [Ruegeria pomeroyi DSS-3]
MLTVLILLGTALTVGTIAWAIDENDDDDGGSGGEGEPTSDREFSGTDGHDLLQGNDLANWINGGTGDDTL
SGAGGDDSIFAGSGNDSADGGTGNDVLRGKDGDDTLTGGAGDDLLHGSTGLDVLSGGAGTDTLQGGFGGD
RLFGNSGDDSLDGGAGSDLIFGGDGNDSADGGTGDDVLRGQGGDDTLSGGDGADLLHGSTGLDHLYGDAG
SDTLLGGYGGDHLSGGAGDDSLDGGVGPDVINAGEGNDTALGGTGDDRLSGQDGDDSLSGGDGADLLRGG
LGRDVLLGGNQNDTLLGGYGPDSLYGEAGNDSLDGGTGGDLLDGGTGEDTIMGIVGRLGNAASGIQDELD
RDTIIGGAGDDELWLGSGDQATGGGGEDTFVVGPWMQQSAVARIDDFNTVTDQLRIEVPTGSSGEVTIEE
DPDTSGVALVLYDNVIVAQIDNAYPGLTVADIQVVENDDLVAAA
>gi|56698736|ref|YP_167576.1| hypothetical protein SPO2353 [Ruegeria pomeroyi DSS-3]
MVEAFLRRGWLRFPFDPVLAAWVDHVLPAARHAVRDPAHAQWLDCEGTWFIGVDALDNDETGRVGDGPPL
AGQAIDFITRHLGMLPLHRGQVSVTYPGYPRPRQGEGEVAFRYRLNRGAAHVDGLKPEGTDRRRHVDEPH
GWILGLPLSAAAPEAAPLILWEGSHRILGPALARAMAGHPPEDWHRVDVTEAYQAARRVVFETCPRIAVH
ARPGEAYLLHRHCLHGVAPWAEDLDAGPDGRMIAYFRPELPGGVSDWIALP
>gi|56697212|ref|YP_167577.1| membrane protein [Ruegeria pomeroyi DSS-3]
MPDTMLLLQMLALLIVIGAFAGVLAGLLGVGGGIVLVPAFFYAFQTLGYGGPQLMQMCLATSLATIIVTS
LRSVLSHNKKGAVDWQILRGWGPGIAVGAVLGVMVAASLRSVALQALFGVLGIVIGAYLGLGRAHWRLGE
AMPGGLRRMVLSPIVGFLSVLMGIGGGSFGVPLMSLYNTPIHRAVATAAGFGVIIAVPSVLGFLLLQIDP
AQRPPLTVGAVNLVAFGVVICMTLITTPWGVKLAHAMDPKPLKRIFAVFLTLVALNMLRKALGW
>gi|56697213|ref|YP_167578.1| IclR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MADDGEREGAIPTNLRLLLVLEAMAEAGVPVTPTEVNERLGLPKPTIHRLFTTLENEGFIQREIDGRGYS
PGRRMRKMSTGILSSLRIRTARIAILSKLAEEIGETSNIAIPDRDAMVYLDRVETKWPLRIQLPVGTRVP
FYCTASGKMYLSSLDRRHLRNYALSAQLDPHTKRTITDPEALIDEAIQARERGYSTDNEEFMEDMIAVAV
PILEGNGRMVSTLSFHAPVQRLAMPDAIGHVERLKTAARRLSELLSEGEPIAADSRAE
>gi|56697214|ref|YP_167579.1| TRAP dicarboxylate transporter, DctM subunit, putative [Ruegeria pomeroyi DSS-3]
MTDGNWTILISVGVTFLFMLGVPVFLVIGYWVIGMSLVLGLPLINTGSALADVFTDGFALLAMPLFILTG
DLINRSGIARRLSDFAYACLGWLRGGLAMASLGACGLFAAISGSNSATTATIGSMLHPEMVKGGYDERFS
AATAAAGGTVGIIIPPSIIFIVYGFLMNLPISELFVAGIIPGAMMVGGMMLVAFFICSRNKWGHLIRLEL
ARVLKTGLGAWLGFFAIGLVLWGIYTGKFSPTEAAGVTVGFCIIVGFVSLPIHALMGRPSEERDFRERGI
SEYLVVQGFSPLELPSITMRSAQITGILAPLIAVSVVMQQILSVLGAQEIIGDFVRGMGGYYAVLFTSMA
IVFFAGMVLESLPVTIILAPILAPIAASVGVDPIQFGVIFLVGASIGFITPPYGLNLYVASGVTGVPYFR
LLRYTVPYLFALLSVWIMVALLPALSTILIPSG
>gi|56697215|ref|YP_167580.1| TRAP dicarboxylate transporter, DctQ subunit [Ruegeria pomeroyi DSS-3]
MTLLGSALFLAIYHYFPWVERKFEATVMVSTYLLIGAIIFVEVFRRFVLNVQAPWSTTLPPFMFLIMTWA
GCAYNVKLRTHLAFAEFRSNMPRPLQFLCLSLDALLWIGFAWIVIVTSTQVAANSAANFQILLGTDNVLQ
WWFLVSVPLSFILIAARALENWLEDLRNYRDGSDLIAAVSIGAD
>gi|56697216|ref|YP_167581.1| TRAP dicarboxylate transporter, DctP subunit, putative [Ruegeria pomeroyi DSS-3]
MKVSDKLSGVSRRDFFRVAGRFGLSSTVLGLGGLTGAVTLPSLAAAAESTYDKRFKKEAKHTLKFGAAGF
NARNLLIERAGCLEFARDLEERTDGEIRVEFIGDNQICGQLSCVEKTQNGIVDIYAASTQNSAGGAPYLN
VLDYAYVFPGRASQYHFLYSPESNAILRDPLEKRHGLKFLFSHCELRGLQMGKSFADKPTVTKLEELFGT
KNRVTGTQLGRIAMQLLNLNPVPVAWEETLDGLKTGLIDGAETWASAVAYANMSPVVSQSVDLRFFCGTE
HTSMSAKVFDSLDGYLQDAVMESAYLAQVHVQAANEAALVKTVGFSDPVLPGTLFDEHDVRPAFLAEDQI
KMAEEMCSPEYNPEPWAQWRERLNNWSGGIDTYAELHRVAREVPADMKPENVEPRRWWKG
>gi|56697217|ref|YP_167582.1| GMC family oxidoreductase [Ruegeria pomeroyi DSS-3]
MQTKQADYIVVGGGSAGCVLANRLSKDPANRVVLLEAGPRDWNPWIHVPVGYFKTMHNPSVDWCYRTEKD
KGLNGRAIDWPRGKVLGGSSSLNGLLYVRGQPEDYDRWRQMGNEGWGWDDVLPLFKRSENQERGPDAFHG
TGGELSVSNMRLQRPICDAWVAAAQNAGYPFNPDYNGATQEGVGYFQLTTRNGRRCSSAVAFLNPARKRP
NLEIITKAQVSRVIVEDGRATGVRYFDGSGREQTITCSREVVLSSGAIGSPQILMLSGIGEGEQLKANGI
EVIHDLPAVGKNMQDHLQARLVFKCNEPTLNDEVRSLFNQARIAAKYALFRSGPMTMAASLAVGFMKTGP
HVDTPDIQFHVQPWSADSPGEGVHPFSAFTMSVCQLRPESRGEIRLNGNDPREYPRIHPNYLASDLDCRT
LVEGVRIARRIAREDPLKAKISEEFRPAKELGLDDYEGTLDWARNNSSSIYHPTGTCKMGRGSGTVVDAR
LRVHGIRGLRVADCSIMPEIVSGNTNAPAIMIGEKASDMILEDHV
>gi|56697218|ref|YP_167583.1| sensor histidine kinase/response regulator [Ruegeria pomeroyi DSS-3]
MMRRAQVSVGRIVFLALFCMSLGALAIGFVSVYGAQTFRQEFERLVDEDLPQATVATRLNAEILGLTSLV
GLLVSADTEIAAATTLIQLQDQLGAIERQSRDLSGFTLRPGEYSDIETALAQLTENLDSLVALNTLRLRS
EAGMIALSERATEAPASPDARLAFLLWRQELDAANWARELHGLGQKLDALLAPDQTHPLAVIGHEMLAMR
RTLLETETVLRGRLKNHIQLSYRLSDSTRFMSSRLISGANQRGDAILSLVRTNMYLILISFLVFATISAF
IYTFLDKQVVGRVQKLTQRIRAYEGSGRAPDPVGRNEITLIETAFSNLTATIAEREGRLVALNRLASDAR
LEAEEANRSKSELLAAASHDLRQPVHAMGLLIGGIDRSALDAASCETLDQLARLTQETMQLFNSILDLSK
LQAGTFTAAQEPIRLAELFGRIEAAFGKRAELAGATLDIAQPASDLCVLGDDQALYRILGNLIANAIQYA
GGGHIRLHCEIGEESCIITVEDDGPGFVLDGDKPDISGPRQSRAGYGLGLSICFALAQAMQSRMTIDRPE
TGGVRFSLPLPLVEADEGQPGALPDPSVGITALDGVRIILLEDDPEVRAATLQSLRRLKCDVTDCASRED
ARQLISQQAGPFLLITDLDLGRGHQVCSFVDEALETAAGLAGVIVTTASPAAVPEAWRRTGNVAVLEKPF
SVSRLVRLVRFLAKPKNTVSDT
>gi|56697219|ref|YP_167584.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Ruegeria pomeroyi DSS-3]
MMRFRGALTLGLWLAGALSAQAGEGDTGAAIRDRGYLLCGVGSDDLGFATLRFDGEWTGFDVDFCRAVAA
AMLGDATAVEFVPLDSLNRLEVLARGEVDVLFRTTTFTFDRDVNAALEFPAITYYDSQKVLVYADTGART
LSDLAGKTVCANSGTTSITNIRHRIDSLGGGIGIQEYASQAGRWRAFFGRECEAVTADGSDLAAMMASRP
GYRDDFVLLEDEIANEPLGPVVREDDRQWEQIVRWVINLTLVAETAGIGQVSDPEEIARLALPAGADLGV
VDTWGAEVIRQVGNYDDIFRRNLGDGSELRMERGRNALWTDGGLMYPLPMTPP
>gi|56697220|ref|YP_167585.1| phosphoserine phosphatase [Ruegeria pomeroyi DSS-3]
MTKFLAIPGEKGASATCFADFVNHAGASAGLAHGAMVASSSAHVFDMPPIVSAPVGERARLRAMAARQGM
DICFLRGNPVKRKLLVADMEATIILDEMLDLLAEDRGQGAEVAAITARAMAGELDFAQSLAERTRLLAGT
PLAQLEGLCQRIRLAPGARALVQTMRAAGARTVLVTGGYGIFAQEVAWLCGFDHVVANNPVIEAGVMTGA
LTLPICTAETKREVLLAECAALGIGPEMACCIGDGANDMLMLRACGLPVSYRGKPVVQDIVDLDIARGDL
TAALFAQGFAADEIEGR
>gi|56697221|ref|YP_167586.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Ruegeria pomeroyi DSS-3]
MRNKETLVILAAAAAAMATGAHAGKLDDVRAAGELACGVSEGVPGFSNPNSEGVWTGLDADICRAVAAAT
LGDANAVRFVPLASKQKVLAVSSGQVDMTSRTTTWTMKRDSAEGVDFTSVVYYDGQGFMVRADAGVTSAR
ELDAATVCLTTGTTTELNMADFARANGLTLEPVVFEGKREAVEAYASGRCDALTTDASQLAAFRAGFADP
SEHKILPEIISKEPLAPFVAHGDNQWKDIVTWVVYGLITAEELGVTQANVAEMTASSTNPNIQRLLGTSG
DTGGFLGLNSTWMVDTISAVGNYGEIYDRNLTATLGLERGVNALWTDGGILYAMPVR
>gi|56697222|ref|YP_167587.1| amino acid ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MVNPDMPSSKKTAAWSPGSLLSQGGVLVVVIAILYVLFSNTQENLAIRGIESGFAFLGHEAGLPIGDSLI
DYSPTRSYGYAFLVGILNTLFVSVLAIVFSTLLGIVIGVARVSRNWLLAKGAAIYVETLRNLPLLLTLFF
IYTVVLAALPHPRDAIALSEGVFLSKRGFYLPRPVAEDGIGLFLGASAVALVLAVMFWRWAKSYKVRTGR
SVPGLRGGLAIFLALSGLAFLASGQPLTSELPVYKGFNFKGGLSIKPEFASLLIGLVLYTAAYVAENVRS
GIQSVHAGQIEAANALGVSSGVVTRMVLLPQALRVTIPATTNDYASLVKNSSLAVAIGYPDMVSVGGTII
GQNGQAIEIIAMWMAVYLTINLIISLGMNMLNARVQLVER
>gi|56697223|ref|YP_167588.1| amino acid ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MCSLLKGNAMSQDTILFQPMAARPAPASQIGPIAWLRANLFGGWKDTAITLSLLAVLLAVVPNLIEWLLI
NATFLGDDETCRQNAGACWPFLQAKFQVLMVGVYPQDLSWRPAIAALALLVLAGFTYADRIRGIALIVAW
AVLPIFALIMIGGAFGMQEVDQSLWGGLMLSVLLALVGVIVSIPLGVLLALGRHYGSPAVKAICVAFIEL
VRGVPLITILFMASVMMPLFLPPDLVINNLLRIQIGMILFSSAYMAEVVRGGLQAIPKGQTEASLALGVS
PARTIIFVVVPQALRHVLPPLIGRCIALFKDTSLVIIVGLLDFLGMVRGAALDPEWLGFQAEAYVFAAFV
YWLICYSLSLYGRALERRGPAGSKR
>gi|56697224|ref|YP_167589.1| amino acid ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MTVKIESHIASGETVIEMQKVNKWYGEFHVLKDIDLTVSKGERIVICGPSGSGKSTLIRCINHLEEHQEG
TITVNGTVLNENMKNITHIRREVGMVFQQFNLFPHMTILDNLCFAPVWARNMPRDEAEETACRYLERVGI
GAQKDKYPGQLSGGQQQRVAIARSLCMNPSVMLFDEPTSALDPEMIKEVLDVMIELADTGMTMICVTHEM
AFARSVADRVIFMDGGEIVEENTPNAFFDNPQVDRTQKFLSQILSH
>gi|56697225|ref|YP_167590.1| Na/Pi-cotransporter family protein [Ruegeria pomeroyi DSS-3]
MQIVGSVALMLWGIRLVRTGFIRAFGGSLRHYLGLAISGRLTSFGVGLAITVFLQSSTATALIISSFASK
GLVQTPAALAVMLGADVGTSISAQILSFNLSWLAYAAILIGFFLHGRGGRFATRQIGRAIVGLGMVLLAL
SLIRMSSQPLREADGLAYVLSALEGEVLLTLFLMAVLTWLVHSSLAVVLLTASLASAGIVPTGTGLVMIL
GANIGGTIPPIIATLSTGPQSQHAALGNAGFKLLASLLVLPFLPWVGERLQSFGGDAQVLVNFHLTFNLL
VATLFLPWVQTAAALLARVFPDTGAGAVEPVTKYLDKELITSPALALTSATRELYRVNERIEDSLALLSG
GIAARDQVDVQGAQENRARVAAMLEEFKFYLTDITREEISESDSAKAMNLLLIATNLGHVSELVTNAVEL
TASTSHEQIRFSEAGTAELLEMLELIHQGIRLALSAALLGDAKVRKTLQKGRKELERMVDESRQAHFSRL
AEGTLSSISTTSLHNELLRDFSRIYYHIYTASKIGGRDSSVMIRG
>gi|56697226|ref|YP_167591.1| LuxR family DNA-binding response regulator [Ruegeria pomeroyi DSS-3]
MTVVLIVDDHHLIRAGAKNLLEGAFSGMRVEGAETVSDALAFLEADNTVDLILLDVNLPDAEAIDGLVRL
KRFDPSNAVALISGETDHELIRAALEAGADGFIPKSADPQVLIHAVSLILEGEIFLPRSYLQGGRMAEVA
TPLDSSERPEQNLTPRQRDVFELMCKGLANKEIARLLDLSESTVKSHVSAIFKQIGTTSRSKTIAIFRQE
GVALPSASED
>gi|56697227|ref|YP_167592.1| sodium:alanine symporter family protein [Ruegeria pomeroyi DSS-3]
MHDRAVNGQQTRDIMNTPIKAAALAAPMAMLSAAPVLAQSVDEKVNQIFANSTGWFVNFIFSPFPGTSFP
WIVMWLVIAATVFTLYFGFIQFRAFPHSISLVKGDYSDPNDAGEVSHFQALATALSGTVGLGNIAGVAVA
VGIGGPGATFWMILAGLLGMASKFTECTLGVKYRNEYADGTVSGGPMYYMTKGFKERGLPAGGFMAILFS
IFCVLGALGGGNMFQANQAHAQIANVVGDFPGWITGFIFAGIVFAVIVGGLKSIASVTEKVVPFMGVLYV
ATALVIILMNADMIGWAFGQIFAGAFTGLGIAGGMVGALIQGFKRAAFSNEAGVGSAAIAHSAVRTKEPI
TEGFVSLLEPFIDTVVICTMTALVIIITGQLVSDPNTGLYLLDEGASTIQTVDGNKGVALTSAAFSSAFP
FFKYILAIAVILFAFSTMISWSYYGLKAWTFLFGEGKTKELTFKIIFCLFVVIGASANLGPVIDFSDAMI
FAMAVVNIMALYLLMPIVKKELDSYLSRLKSGEIKKFG
>gi|56697228|ref|YP_167593.1| universal stress protein family protein [Ruegeria pomeroyi DSS-3]
MTTKFVVGYDGSAASRRALDFAMERAKAGGASIIVAHVLEWSPYSFLTPTEIEERHKRRAEEMARAETAI
LAPLKAELAGSGVEIETAIRYGQVADTLCDIATKSGAAQIFIARQGESGLAARVFGSVAGTLAQYAPVPC
TIVP
>gi|56697229|ref|YP_167594.1| AsnC family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MDGLDKKILSVLQQDGQISMAALSERIGLSLSACHRRVKLMEAEGIIRNYAAQIDRQTVGLEVQVFIEVK
LNSQRREDLEAFEKAILSMPEILECHMITGEFDFLIRVCVHSPADYEALYRSSLSAIPAVSQMKTLLSLS
TVKEFRGYHLR
>gi|56697230|ref|YP_167595.1| hypothetical protein SPO2373 [Ruegeria pomeroyi DSS-3]
MIAYVTVGANDIARAERFYSAFLPALGYVLERYHGDLSYILPRQAGQSFAPPDFYVKSPFDGGAAVPGNG
NMTAFEASGQAQVRALHAAALAAGGADEGQPGFRDAYGPHFYVGYLRDPDGNKIALFSSNPADPGRDG
>gi|56697231|ref|YP_167596.1| tRNA-dihydrouridine synthase A [Ruegeria pomeroyi DSS-3]
MERKSQNIVPWRMSCAPMMDWTDRHCRYLHRLLSRQTLLYTEMVTAPALVRGGALHLLEYSVEEHPVALQ
LGGSDPEELAQAARLGAEAGYDEINLNCGCPSDRVQSGTFGAVLMKHPGLVADCVTAMREAVDVEVTVKC
RIGVDDQDPETVLPEFLEQIAGAGCQRVIIHARKAWLQGLSPKENRDIPPLDYDLVHRMKARFPGMHISI
NGGIDTLAAARAHLDAGLDGVMIGRAAYHQPADILCKADPLIYGTGTASDPVTAVRAMLPYIEAHLATGG
RLHQITRHMLGLFAGRPGARGWRRMLSEGAVRPGAGPELVEAALDQVAGLWHTSETPLDPAPRL
>gi|56697232|ref|YP_167597.1| CoA-binding domain-containing protein [Ruegeria pomeroyi DSS-3]
MPEADIDHIYDYDPSYIADILKSVKTIAMVGASADKTKFSYGVLRQLSEIGYDILPVNPNPNVSEIRGLK
VYHSLEEIDQPVDMVDVFRPKEELYGFAEKAIAIGAKVLWGQIGVYDDKAAALAEDAGLKVVMNRCPKIE
LFRPFWKPRLDLEI
>gi|56697233|ref|YP_167598.1| ferredoxin [Ruegeria pomeroyi DSS-3]
MTTHTVTIANREGASFQVNARRPLLEQLRDQGVDLPYGCEYGGCITCAAKLTAGEVDQRRQVALNNRQIA
NGYVILCVARATSDITLEIGVESHDTLYRNPFLDPLQPHELKADIATPRPSIGDALEQTKES
>gi|56697234|ref|YP_167599.1| selenium-binding protein, putative [Ruegeria pomeroyi DSS-3]
MECCGPGYASPQAAIEAPREKLLYTIAIYTGTGIQKPDYLATVDVDPDSPTYSQVIHRLEMPGIGDELHH
MGWNACSSCHDDGSMSRKYLILPGVRSNKLHIVDTATDPRAPRLHKVIDGAEIKAKADLSGPHTVHCLGS
EIIISFLGDAKGEAPGGYLHLNKDFNIVGRWENSMGDIKFGYDFWYQPRHNVMVSSEWAAPNTFMPGFDL
EEVGHLKYGRELHFWDFEKREPVESFYLGEDGLLPLEVKFHHNPDSTHGFCGAALSTNVIHWWKDGAGKW
QWEKIIDVENEMHPDWPIPLPGVMSAILVSMDDKYLYLNNWLHGDMRQYDITDPHNPKLTGQVFMGGLLN
KAPVVNGVEMAGGPQMFQLSLDGRRLYVTTSLFSTWDNQFYPEIREKGGVMVMIDCDPENGGMKINPDFI
VDFGKEPNGPSRCHEMRYPGGDCTSDIWL
>gi|56697235|ref|YP_167600.1| acyl-CoA dehydrogenase [Ruegeria pomeroyi DSS-3]
MPDLTLPTSPWMDEELLMLSDACAQFYERECLPHYEEWEAQGSFPRDLWLKAGEMGLLGAEVPEDYGGLG
GSFAHDAVIAYQGNLAGIDGWGGGLHNSIVIPYLIHYGSEDQKKRLPPRMISGDLIGAIAMTEPGAGSDL
QNIKTTAVKDGNHYRISGSKTFITNGALANMIIVAAKTEPKVGGRGISLFLVETDGLEGFRRGRNLDKLG
MKSNDTSELFFDDMRVPASALLGAEEGQGFVQMMQQLPQERLLIGVYAVARIERVLRVTLNYVAERSAFG
KKLADFQNTQFVLAECATEATIAKTFLDACISEHLEGNLTTEKASMAKYWLTDLQAKIIDRCLQLFGGYG
VMSEYPMERMYRDNRIERIYAGTNEIMKLVIARGLLRD
>gi|56697236|ref|YP_167601.1| LysR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MKLTQLQYFCGVVEHGGFISAARELSVAQPALSRQISDLEKELECQLLERGPAGTKVTASGQRFYSRAKN
VLEQVNLARADAKSGTDMLTGQITMALPVGMASHLAAPIVKNVSDAYPGISVRIEDGLGYETGQTIDAGK
VDFGLLANVGNLQNVSIEPVFEEYLFLFSKRSGEPDTSDIDLIELQNLPLIMPNRKVNVRRALENSMMKI
GGQLTVAYEQQSLLTIRSMVKAGIGSTVLNWPSMADLWFSGDLDARRIVNPGLSRTVCLAVPTNRPLSSA
ATAAYDIVRQTLIAEVKEGNWRGGVMLKDIN
>gi|56697237|ref|YP_167602.1| tricarboxylate transporter family protein [Ruegeria pomeroyi DSS-3]
MRPIKKLLGAALVAGLSVTAGVQVAAADEYPTKPIEMIIGFNPGGFSDAMARKLSEPLTEELGQTIVHTY
MGGAGSSIAATAVKEKPADGYTLVVGTSLTFGFNPLQGEVAYTKEDFDYLLTMARFETSFVSLADKPWTD
LTSMLEHAKETGIPLKFGSLGPADRLQIDAITKATGVTIIPLPIKGGANMMQSILGGHVDFGLSGGPHVQ
YVKSGEMIVLAASGSEPLNATPDAPTMSSLGYPAVSYNSVIAAPKGLPEDVRAKLEQALLDAANSGEFQE
LVQGRFVGITPMNGAETAASIDAISAAMEAVMSDSGS
>gi|56697238|ref|YP_167603.1| hypothetical protein SPO2383 [Ruegeria pomeroyi DSS-3]
MPLTNRNIASIVIAVLSGFALWLLPDHVRGDNRLFGSNGTLLPALALAIILGLSALEVLQSLLAARRSRM
PHAEDVAIGRAALFGMLLVTLLAGVFAVLLRPVGYVPVALLLVSALMVGTGGRRPLVVLAVSAVAVAILV
VGLRFGLGVHLQLWPSANLWGG
>gi|56697239|ref|YP_167604.1| tricarboxylate transporter family protein [Ruegeria pomeroyi DSS-3]
MGRLTMDALLAGIQNAFALGPLLAIAAGVSIGIFMGAVPGLTAAMAIALLAPITFGMDPLTAVAFLIGIY
KGGTFGGSISAILLNVPGSPEATATAFDGYPLSKSGRAKQALQMALFASVCGAILADLMLYAVAGPFSKI
ALKFGPAELTFVVLFAFTFVAGLTGGSLARGLIACAFGVLCAMVGLDPMSASPRMTFGIVELLDGLPLIP
IAIGMLGLAEVMVAAERAFLRRKEVSSDTESSPISATSGPHLSLPEFARHWKTVLRSSLIGSAIGALPGI
GASLAAFIGYGTAQKYSKTPEKFGKGTLDGVAAPEAANSAVVGGSFVPLLTLGIPGNVTTALLIGTFLVH
GIEPGPHVFKTEPALIYGIFTILFVANFFNLAIGLMGSGLYAHIVKAPEYVSYSIIGLTCMTGVFASTNS
IVSLYIMIIFAVIGYLMKKFDYSFVAFLIGFVLAPEFEVSFRSFLLVAQGDPLGLLMTRPIALAFCLLTI
VAVLRIVWSEHQRRTRSATSLKNTPDPSSGQKNP
>gi|56697240|ref|YP_167605.1| benzaldehyde lyase, putative [Ruegeria pomeroyi DSS-3]
MNAHTRIRGGALLARALKEKGVEHAFTLAGGFCNPALEGFMECQMPIINCPHEQVAGHLADGHSRITRKP
SVCLVGPEGFANAVPAMLEAWGERTPVIFITGSSTLKRQGAGGFKEIDDVAIAAPLTKYSVQITDGSRIS
EFVDRAWQAATTGYPGPVHLSLPVDIMFSSFEEDAGRNERPFDRSDKPVPRAWPDPAQLDVVLGLIRNAE
RPVIIGGHGTWWSGGEEALARAGETLRIPIFNVPYHTKMLGEGCDAYMGLADFHQYHPSKPAIHEADVVV
MVGCRLDNQMNFGNPPFIQPETKLICVNGSHEELDYNIGADVPLLSDPGAFLTALEGLKKTWEPWLDLQI
QRRRDWVREWSDHIAAETATDEAEGRKMHPLQLALDVQEAMKDGDWLVFDGGNTHFWNEIATNIAAARGR
VLGGILHPGNYSLLGVGVSFALAAKNLNRDKTTVLVTGDGAFLSGGLSIETCFQENIPIVVVVDNNGGLD
CISQQQERLFSNRQHYATDFRDIPFHSMFEGLGGHGELVTRRADLAGALERAIASGKTACINVKCRGVIS
PIVAATSDKRDKASIE
>gi|56697241|ref|YP_167606.1| hypothetical protein SPO2386 [Ruegeria pomeroyi DSS-3]
MATVSSHILNAVDGTHAAGVAVRLINLGTGETLFDTMTDAGGRLKEVVSRIDRDAEYELTFDVGAYWVAR
GIAPRMREIVLRFGMPDDDGTYHSPIIASPNGYSVWTSE
>gi|56697242|ref|YP_167607.1| oxidoreductase, FAD-binding [Ruegeria pomeroyi DSS-3]
MLAPDIAEKLKTISGPKGWLGGPDTARYNEDPRGRVTGAAELILRPDSADKVSHILKTCNDTGTGIIPFG
GGTGGANGHLDPCGRHVVLSLERMSRIRSVSASDSAITVEAGVKLCDIHAAADGIGRVFGLSLASEGSCT
IGGNLASNAGGVRTLRYGNARDLCLGIEAVMADGSVLSSLAPLRKDNTGYDLRHLLIGSEGTLGIITAAT
LKLSPATQSRDTLFCAVPSPGAALDLLNTLRDQLGEVVTAFELMSALGLSLALKHFPTLRDPFRDRHDWY
VVADIAGPRALSDWLEAALAQAFEAGLIKDAVVAASGAQAADLWALRENAFEYNKLEGVLYSSDTSVPLG
QIGDFIDRTARDLAEWDSSLRANFYGHIGDGNIHVNVFAPENARQVFLEHRPDAAARIADIIDTATLDCD
GSISAEHGIGRAKVDALKRHGDPVKLAMMRHIKQALDPNGILNPGAVL
>gi|56697243|ref|YP_167608.1| LysE family translocator protein [Ruegeria pomeroyi DSS-3]
MTWEAWISLVLVAGVAIVTPGPGNLNTLRRAVELGYRSAIFSVMGNAAGLMVLGAATGIGLLAMLIASPG
AWALFQWVGIGFLLFLGAQMILTSSHVCTASTPASRRTRFHLFAEAAGVSALNPKAALFFVAIFPLYTDP
DRPMPLQVFLIVATCLSISVMSHALYILLAHQMRPHLSRPASYRAFRLCSGLVMLGLALWLLMQNVAGTE
VAG
>gi|56697244|ref|YP_167609.1| oxidoreductase, molybdopterin-binding [Ruegeria pomeroyi DSS-3]
MAQSTRKGSIMSKQTRELLTSTHWGTYRVEVKDGKVTALRGFEEDPDPSAIGPGIVDVLDGPTRITAPMV
RKGWLEGGPGAAGDRRGADDFVEITWDEANRIVANELDRVRKTHGNRAIYAGSYGWASAGRFHHAQSQLK
RFLNCIGGFTGSKNTYSFAAAEVVVPHILGDFRTYIDTTTSWASIASDCELFVAFGGVPLKNGQISQGGT
GAHVQRGGLLAAHEAGVRFVNISPLRSDILDRVGADWLAIRPSTDVALMLALAHVLLNEGLHDPDFLDRF
TVGFDRFAAYLRGGTDGQAKTPEWAAEICGIPAGTIAKLARDMAASRTMISTAWALTRQDHGEQPFWAAI
ALAAMLGQIGLPGTGIGFGYSAMNNTGLNRRQINYASFPQGRNPVPDFIPVARVTEMLENPGGRFEYDGK
TYEYPDIRLVWWAGGNPFHHHQDLNRMRRAWARPETIIANEWCWNALAQHADIVLPCTTPLERSDIALTP
KDPYQVVMDQAILPVGQARDDHGIFRGVAAEMGVEDMFTEGKSAGEWQRWLWDVSRQQAAEQGVELPGWD
RLQRDGWIRVPAPAAPTIMLEAFRTDPTANPLATPSGKIEIYSETIAGFGYDDCPGHPAWMEPAEWLGRA
DPGQLHMISNQPRNKLHSQLDHGSVSRADRPKGVEPVMMHPADAAARKLTGGQIVRLHNTRGACLAELRL
SDAIRPGVIQIATGAWLDPQGDLCRRGNPNMLTLDKGTSKLAQGPIAHSCLVMVEACAEA
>gi|56697245|ref|YP_167610.1| phage integrase family site specific recombinase [Ruegeria pomeroyi DSS-3]
MIVTHAAAVHGLDTSPEPVDLARVALKRLGLIGKGTERDRHPTTDELNRLFRCFDDNERLTLPMTRIVKF
AVATAMRLDEICRVEWADLDVDHRTLLIRDRKDPRNKTGNDQRIPLFAATGFDAWALVTEQAKELGLTNG
RIFPYSSKSVGTAFRRACVEVGVKDLHFHDLRHEGTSLLFEWRAPIWWSGLTVSASSASGPLERYFPAQA
GGIPVCYAA
>gi|56697246|ref|YP_167611.1| hypothetical protein SPO2392 [Ruegeria pomeroyi DSS-3]
MLADQYGRYGYRMVSGLLNNAGWHVIPLPGRRFA
>gi|56697247|ref|YP_167612.1| carbon monoxide dehydrogenase G protein, putative [Ruegeria pomeroyi DSS-3]
MELSDEIIINAPKDQVYAALNDPEVLKQCIPGCEELIKHSDTELEAKVVLKVGPVKARFGGNVVLDQSGA
PDAFSLTGQGNGGAAGHAKGGADVTLTADGDTTILRYKAKAEIGGKLAQLGSRLIQSTAKKLAAKFFKSF
ADVVNEDVAA
>gi|56697248|ref|YP_167613.1| carbon monoxide dehydrogenase F protein [Ruegeria pomeroyi DSS-3]
MSPAEILDTDLADAAQELRAQQVPFAFATIVRTAGATAAKPGAKALLSADGTIVHGWLGGGCTRGAVKRA
AVEALQSGVPQLISVAPEDLLAEKGIAPGDTVDGTHFARNGCPSRGTVDIFIEPCLPMPELVILGASPVA
QALNTLAPQFHWAVSAALASEPVDAQQKFIVIATQGQGDLDALKAALSVDAAYVAFVGSGRKFAALAEKL
HGAGIGPEKTNAVNAPAGLDLGAVTPEEIALSILAQLLRVRRAETVVANG
>gi|56697249|ref|YP_167614.1| carbon monoxide dehydrogenase E protein [Ruegeria pomeroyi DSS-3]
MTRVTRFAARDPGPAARVVGFVAHLRDNGLRLGVAEADLSLTALTQVNAAAPDECRRVLRAICTGCKEEA
ERFDALFDSYWMDAGRVKQRIVPKPQATLNESVHSSRDGSGEDAGSSGTSTTPDTEDGQADSDGTGKLIA
TEQRNLSRRDLRDLVRPDEIAEAEAIAHRLGAALRDKRSRRRIAARKGDRLHFRKTIRRSLSTGGEPLQL
LRKRRPDRARKIVALCDVSGSMSVYAQVFLAFLAGLMRADKDADAYLFHTRLVRITEALRDKDTMRAIGR
MSLMADGFGGGSKIGPSLQRFADTYAKRFVDGRSVVLILSDGCDTEPPEHLDAALTKLKKRGCKIIWLNP
LKGWRDYAPVAGGMAAALPHLDLFKAANTLDDLAALETELGPL
>gi|56697250|ref|YP_167615.1| carbon monoxide dehydrogenase D protein [Ruegeria pomeroyi DSS-3]
MCAPAPEILMTWQSLQTALAAQSYVASDDLSVALHLALTLERPLLLEGAAGVGKTEIARTLSLTQDTKLI
RLQCYEGLDASQAIYEWNYQRQLLTIRSAAEGGETGKSVEDRIFSRDFLLERPLLAAITQEKPPVLLIDE
IDRADEEFEAYLLEVLSDYQVSVPELGTITATCKPIVILTSNGTRDLSDALRRRCLYTYVEYPDRAAELA
ILRARCPQVEGHLANQIIGFVQKLREEELEKTPGVAEMLDFAAALMGLGIADLTHDPAVLQSTLTTLLKT
QSDQAHITSDVAARIAGKAA
>gi|56697251|ref|YP_167616.1| carbon monoxide dehydrogenase, large subunit [Ruegeria pomeroyi DSS-3]
MKDEVTSREERIENLKGMGCSRKRVEDARFTQGKGNYVDDIKLDGMLFGDFVRSPYAHAKIVNIDTSAAL
EVPGVLAVLTAKDLEPLGLHWMPTLAGDKQMVLADGKVLFQGQEVAFVVAVDRYAAADGIEAVEVEYEEL
EVLVDPFKAMQSDVVLRPDTVAEDGSPADGAHGPRKHHNHIFTWEAGDKGPTFETIDNAEVVAEETMYYH
RTHPCPLETCGCVASMDKVNGKLTLWGTFQAPHAIRTVVSLISGIEEHNIRVISPDIGGGFGNKVGAYPG
YVCSVVASIVTGKPVKWIEDRMDNLMTTAFARDYHMTGRISATKEGKITGLHCHVTADHGGFDACADPTK
FPAGFMNICTGSYDIPTAFLEVDGVYTNKAPGGVSYRCSFRVTEAVYFIERMIEVLAIELNMDAAELRRI
NFIKKEQFPYKAALGWEYDSGDYHTAWDKALKAVDYDGLRAEQAQRVEDFKAGKTRSLMGIGLSFFTEIV
GAGPVKNCDILGLGMFDSCEIRIHPTGSAIARLGTISQGQGHATTFAQILASEIGLPADSITIEEGDTDT
APYGLGTYGSRSTPVAGAATAMAGRKIRAKAQMIAAYLLEVHDDDVEFDVDRFVVKGAPEKFKTMKEIAF
AAYNQAIPGIEPGLEAVSYYDPPNMTYPFGAYVCVMDIDVDTGVPEIRRFYALDDCGTRINPMIIEGQIH
GGLTEALAVALGQEIAYDDMGNVKTGTLMDFFLPTAWEVPNYETDYTVTPSPHHPIGAKGVGESPHVGGV
PCFSNAIQDAFRPFGNRHTNMPHDHWRIWKTANELGLHD
>gi|56697252|ref|YP_167617.1| carbon monoxide dehydrogenase, small subunit [Ruegeria pomeroyi DSS-3]
MGKKQHYKITVNGKEEEFLAEPRELLIYTLRERLNITGPHIGCDTSHCGACTVTIDGKSVKSCTMFVAQA
DGKDITTIEGIGGPDNLHPLQTAFKEHHGLQCGYCTPGMITRAKKLLEENPNPTEEEIRFGMAGNICRCT
GYQNIVKSIRAAAAEMNAAKEAAE
>gi|56697253|ref|YP_167618.1| carbon monoxide dehydrogenase, medium subunit [Ruegeria pomeroyi DSS-3]
MIPAAFEYHRPKDMAGVLSILQEHGDDARVMAGGHSLIPMMKLRMAEVPHLIDLQDVGGMSDIEIGSDSI
RIGAMVTQHDIIDNDALAQAAPILREAALQIADPQVRYMGTVGGNVANGDPGNDMPGLMQCLNATFTVVG
SDGEREIPAREFYEAAYMTAREDDEVLTAVTIPMPQGGHAYEKQKRKIGDYATAAAAVQIVKDGATCVSA
SIAMTNLSDTPVYSEAAGSALVGTSVDDAAIKAAMAAMLDDIDPTEDNRGPVAFKKHVAGVILRRAIERA
WSRT
>gi|56697254|ref|YP_167619.1| carbon monoxide dehydrogenase operon C protein [Ruegeria pomeroyi DSS-3]
MEFLDVSHNNLLVAMSCLVALVAGFTGLSLTRDLGAKPDFEKKALIALAAISLGGGIWAMHFVAMLGLQM
PILFYYDAAITLISALVAILIVGAALIILHFTVRTRLTVSLAGAIVGVGILVMHYIGMAGLELCRAVYAP
LGVIVSSLVAVLLCILALGIAYGQRTNRNIFLGTLCFAVAVTSVHFLAMAGTKFVAVSDGTEFGPLMSNE
TLALGVIFFSFVMFGACLWVGVTYLPRPMENVAPPRKKDVPEAEARLLQVPCERDGGKVFVSAKDVVFVR
ADAHYTQVYTHHERLFCVWSVTEATKRLVPLGFLQTHRSYLVNPGHVVRFERTKDSGKCVFGGSETPPAP
VSRSKLKAIQDALASQVGAIRAT
>gi|56697255|ref|YP_167620.1| type I secretion target repeat-containing protein [Ruegeria pomeroyi DSS-3]
MMSGTVNYTYSLAGARFANPVSEEHFGSGFENRGAQTVDPSDDVAQLVERLDLQYLRFPGGSHMEKFFDL
ANPDERRPIALFGDNAGQPAINDFVSLSEFFAYADANNISPIVAIPTWRYFDQNTRSIDPAAEAVIKGFI
RDVLTGEYGNIDIHAFEIGNEWFDDDFNWTPAEFAHVQKSIAVWVAEVRADVQPINRPDIYIQSSQLGSQ
DSDRNGIKDNVEFLSVFTQAQLAQIDGIVDHFYQPVRSATIFDFPDSLVASTRIGRLREDGWNVTGTNAL
KIVTTEWNVRADEGKGEITGLERAPMFVRLFSDMISAGVDVASVFTTQALGDSDGTIAQKDEDTFTPTGL
LFRMMKNALVGTELVDADGNGNFTTNDVLFQNTAGHNVGYTFTYTSDDKVVVYFSSGVGSTTTINADFGQ
LLNSGYHLHGTVLKVTANGDPLAKDADGMLEARTRRDLEGATVDGLLDFDLGGYETIQLEFTKNGGVSLA
GDDQTATSDEIIGTGFNDHLEGFDSNDTLIGDGGNDTLEGGTDDDSITGGAGSDVIFTGGAASNGYGRDT
ASGGDGDDQLIGSNGDDWLYGDAGNDTLNGGEDYSTADVDYLYGGDGNDLLISGQGTTRADHQHRGDQLF
GEAGDDTLQGGQADDHLEGGVGDDSITGGAGNDVINTGTIGSQTVGDDTASGGDGDDEITGSNASDRLYG
DAGNDTLNGGDDWITADVDYLYGGDGNDLLISGQGTTRADHQHRGDQLFGEAGDDTLQGGQADDHLEGGV
GDDSITGGAGNDVINTGTIGSQTVGDDTASGGDGDDEITGSNASDRLYGDAGNDTLNGGDDWITADVDYL
YGGDGNDLLISGQGTTRADHQHRGDQLFGEAGDDTLQGGQADDHLEGGAGNDSITGGAGNDVINTGTFDS
RTAGHDTAAGGDGDDEITGSNASDWLYGDAGNDTLNGGDDWITADVDYLYGGDGNDLLISGQGETQADHQ
HRGDQLFGGAGNDTLTGGKANDYLEGGTGADSFVFLSDFGQDTIADFSTSQSGETIDLSGVSQITSFSDL
ATNHLTQSGSDAVINDGAGNTITLTGINMADLTADDFLF
>gi|56697256|ref|YP_167621.1| hypothetical protein SPO2403 [Ruegeria pomeroyi DSS-3]
MLADQYGRYGYRMVSGLLNNAGWHVIPLPGRRFA
>gi|56697257|ref|YP_167622.1| phage integrase family site specific recombinase [Ruegeria pomeroyi DSS-3]
MIVTHAAAVHGLDTSPEPVDLARVALKRLGLIGKGTERDRHPTTDELNRLFRCFDDNERLTLPMTRIVKF
AVATAMRLDEICRVEWADLDVDHRTLLIRDRKDPRNKTGNDQRIPLFAATGFDAWALVTEQAKELGLTNG
RIFPYSSKSVGTAFRRACVEVGVKDLHFHDLRHEGTSLLFEWRAPIWWSGLTVSASSASGPLERYFPAQA
GGIPVCYAA
>gi|56698735|ref|YP_167623.1| ISSpo6, transposase orf A [Ruegeria pomeroyi DSS-3]
MAKSLSLDIRERVVALVGEGLSCREAARRLRISAASAVRIVQRHKVRGSVAPTPRGRPRGGGKLDAVSRF
LRREIEARPDMTMPELADRLRDIHDVRADPAELSRYLRHRLGLTYKKIPHRDGKTGQAGARRAIRLAAQA
AAEDAC
>gi|56697258|ref|YP_167624.1| ISSpo6, transposase orfB [Ruegeria pomeroyi DSS-3]
MRAARYDWQHRRLPRMRVEPHRLVFIDETAVTTKMTRLRGRCPRGARLEADAPFGHWRTQTFIAGLRVDE
LTAPWMLDGPMNRAAFEAYIETQLAPTLAPGDVVIADNLAAHKSKRVQDLLHDQDNWMLFLPAYSPDLNP
IEMAYSKLKAHLRRIAARTFDALTEAVGSICDLFSWQECEAYFKAAGYVAE
>gi|56697259|ref|YP_167625.1| hypothetical protein SPO2408 [Ruegeria pomeroyi DSS-3]
MDGGRIIYALDRGLLRDLKFSTYSFENSSQGKFILNIIFGDSTYYVDSLSENLKRGQGAKIRNGWMPNRA
AIGYRHCRESQRMVPEPKNFNVVRDLFDLLLTGRYSVSEIYRIACEDWGYMARYSHEQLTYGTIAPGVAR
RLLDAGRVDEALGIVIGARAVEDGKSFRMLSYSLDEVYQECLERLGRTDELKTHVWSTFRETLSAPVCNS
T
>gi|56697260|ref|YP_167626.1| short chain dehydrogenase/reductase family oxidoreductase [Ruegeria pomeroyi DSS-3]
MTARDRKGRSMSKTIIITGAGSGVGRVTAQAFLEAGWRVGLVGRRAAALEETAAGHVNARVMACDVTSEA
QVDAAFAAASAEWGRLDALFNNAGVSLKGAPIDEISVDDWRNLMDINLNGSFICARAAFGLMRRQDPQGG
RIINNGSVSAYVPRWGSAAYTASKHAITGLTRTISLDGRPFNIACGQIDIGNALTEMARTMTTGMPQADG
SIAIEPVMDVSNVARSVVHMAELPSEANVQFMTVMATNMPFIGRG
>gi|56697261|ref|YP_167627.1| dihydroxy-acid dehydratase [Ruegeria pomeroyi DSS-3]
MSDTRANKRFRSQEWFDNPNNPGMTALYVERYQNSQFSREELQSERPIIGIAQTGSDIAPCNKIHVFLMD
RIKAGIREAGGIPMEFPVHPIQETGKRPTAALDRNLAYLSLVEVLHGYPLDGVVLTTGCDKTTPAMLMGA
ATVDIPAIALNGGPMLDGWWQGKRAGSGMIVWESRRLLAEGKIDYEEFMARVCSSAPSLGHCNTMGTAST
MNAMAEALGMSLTGNSAIPAPFRERMSMAYETGKRIVGMVYEDLKPSDILTREAFENAIVVNAAIGGSTN
APPHLQAVARHIGVELNVKDWETIGFDVPLMVNMQPAGEYLGESFFRAGGVPAVMGELLKAGRIHVQAMT
ATGHTMGANLAGIESQDRNVVTSYDAPMRKNAGFKVLSGNLFDSALMKTSVISQDFRERFLSEPGNEGVF
EARAVVFEGPEDYHERINDADLNIDERTILFIRGVGCVGYPGSAEVVNMQPPDAVIRQGVNHLPTVGDGR
QSGTSESPSILNASPESVVGGGLAHLRTGDMVRLDLNSSRMDALVPEDEWQARIDAWQPPEIVSQTPWQE
IYRRHVGQLADGGCLELATAYQKVRNALPRDNH
>gi|56697262|ref|YP_167628.1| hypothetical protein SPO2411 [Ruegeria pomeroyi DSS-3]
MGRSAIGLAIEFLFGIPNARTINGADPIRHLALLFCGSLAFAPPALADVDIQAADACLAAAFDAGGQGGD
CVESAHAECSALPEEAPAVAVLCFTDGQRVWDTATAATMKSLATRLPEDVAAITGIEVKYDILSGLLQCD
RLEELAIAVSDLPSGTIAREKARCAATVAGLAYTRLRWRAQGLK
>gi|56697263|ref|YP_167629.1| aldolase, putative [Ruegeria pomeroyi DSS-3]
MIEEPPLLTIRRAFPRPTAAQVAAFQDVPTGFVCDALGGQGAMNTVIRPIGGLEREVHAAGPALVADNGP
AEILATVAAVHFAQPGDVIVAATHGGRNVAAAGDNLCAMMRNKGCVAFVTDGELRDYKGLMEVGLPAWCA
GLNPNSPFSKGPGRVGFGATVAGRHVESGDMIVADRDGVVVVPFTRIDAVIARLEQITRLEAEAEEKVRS
GYCDFPAIEAMIADGSAIVID
>gi|56697264|ref|YP_167630.1| short chain dehydrogenase/reductase family oxidoreductase [Ruegeria pomeroyi DSS-3]
MNTVDLSGLVAVVTGGAQGIGRAVAERCLASGARVALWDRDRALAERTAAALGTAETVRACGCDITDPAS
IAAAMAATEAAFGQVDILVNSAGIAGPNALVEDYDDDAFAQVIAINLTGTYLVNKAVVAGMKARGFGRIV
NIASVAGKEGNPNAAAYSASKAGVIGFTKSLGKELAGFDIAVNCVTPAAARTAIFDQLSQEHIDYMLSKI
PRARFVEVGEIAAMIAWLVSRENSFTTAAVFDLSGGRATY
>gi|56697265|ref|YP_167631.1| mandelate racemase/muconate lactonizing enzyme family protein [Ruegeria pomeroyi DSS-3]
MRITAIRSHVLQTDMPEELGYSQQYYARRTAHIVEVQTDEGITGWGECFGPGTVALANKTIVEKVIQPMV
LGDDPLDRDVIWHKVYNLLRDHGQKGMPIQALSGVDIALWDIAGKVTGLPLHKLIGGAHRTRVQAYGYGM
MLKRESTAAHLARFADEAAAIRDMGFAATKMKVGLGAREDVKLCEAVRRGVGEGFDFMVDANHCYTTSDA
FFVGRALEELGAYWFEEPVAPEDLDGYRALRAGLKVNISGGEAEFTRWGWRRLLEAQGLDIAQPEVCALG
GITEYLRVLALCHAHFVPVVNHVWGSAVAVATNLHLLAAMPPMPGGLFPREPWLEFDTTLNIFRDSLLTE
PLDIQGQVARNGGWIAVPDGPGLGVEPDRAFLSAYAFAG
>gi|56697266|ref|YP_167632.1| phytanoyl-CoA dioxygenase family protein [Ruegeria pomeroyi DSS-3]
MLSREQKDFYAENGYLLIENAVTTEQLDRLRAITAGLIDASRQVSASNDVYDLDSGHGPDSPRLTRIKIP
HKQDPYFWEVLRTSAMTEVLTDLLGPDTSILTSKLNTKAPGGGAAVEWHQDWAFYPHTNDDLLAFGLMLE
DVTEDNGPLMVVPGTHRGPVLDHHVGGVFAGAIDPDDPLFDRDRIVTLTGKAGSMTVHHVRLLHGSAPNI
SDRPRFILFYELGRADAWPLLGAASYIHSLGQRRFWDDLVDRVVTGAPCIQPRVAPVPVRMPLPPAPDTS
SIFKTQESAGAKSAFATVPRKGQQ
>gi|56697267|ref|YP_167633.1| 3-hydroxyisobutyrate dehydrogenase family protein [Ruegeria pomeroyi DSS-3]
MDRPVIGFIGLGFMGHGMAKNILKGGYPLWVRGNVNRTPIDSLVALGAQEAASPADMAARCDIIHICLGN
SKQVEAVIRGPEGILAAARPGLIVIDTTTADPVSTLALAAEMAAQGVHMVDAPLGRTPKEAEDGTLDAMV
GCDEALMKTITPVIDCWAGTITRIGPVGAGHKMKLLMNFLGGAYAALYSEAVVLGARVGISPHTFREVIG
PSRLGSGFFATFMQYVCERDENAHKFSIANLSKDMRYVNAMATEAGVVNIMASAARHYYTHAEAQGAGQD
FVPMLSNHVGALNGLDMDEVTRK
>gi|56697268|ref|YP_167634.1| gluconate 5-dehydrogenase [Ruegeria pomeroyi DSS-3]
MDLFDLKGRRALVTGSSMGIGYALARGLAQAGASVVLNARDGARLAGAAEQLRGQGIEVETLVFDVTDAD
AVRKAVDGFEAEIGQIDILVNNAGMQHRTPLEEFPVEAFDRLMRTNVNSAFYVGQAVARHMIGRGAGKIV
NIASVQSALARPGIAPYTASKGAVSNLTKGMATDWARHGLNCNAIAPGYFDTPLNAALVADPEFSAWLEK
RTPAGRWGEVEELVGACIFLCSDAASFVNGHVLFVDGGITASL
>gi|56697269|ref|YP_167635.1| amino acid transporter LysE [Ruegeria pomeroyi DSS-3]
MLTFAAAVLFLIITPGPGVMTTAGFGAAYGFRASLSYVVGLFIGTNLVMLAVMTGLAAVLLSVPGLRLVL
LVLSVGYLLYLAALIALAGARVAFIEARSAPGVMRGVLLQAINPKAYAVNTSLITGFNYAPDAFLFEMFT
KALILNAIWIPIHLAWLWAGAALHRLNLPHSTQRAINILMALSMLGVVALALWSASRVKA
>gi|56697270|ref|YP_167636.1| hypothetical protein SPO2419 [Ruegeria pomeroyi DSS-3]
MLPHSNPTPEATLVGRIWRPGIGPCLVRLDGDRVVDITSTALPTLHALLETPDPLDTARAAPGTPVTTLA
ELAGSSSPDAGSDALRLLAPPDLQAVKASGVTFAASMVERVIEEQAAGDPDRAAAIRVRVGRVIGDSLSG
IVPGSPKAMQVKAVLQEEGLWSQYLEVGIGPDAEVFTKCQPMAAVGWGARVGLHPISSWNNPEPEIVLAI
NSRGDILGATLGNDVNLRDVEGRSALLLGKAKDNNASCAIGPFLRLFDADFTLDTVRAAELSMTVKGSDG
FILDGRSSMAQISRDPASIVAQTIGRHHQYPDGFFLFLGTMFAPIQDRDATGQGFTHHQGDVVTISEAAL
GSLRNSVFLSTDCPEWKFGTAALMKNLAKRGLL
>gi|56697271|ref|YP_167637.1| 2-dehydro-3-deoxygluconokinase [Ruegeria pomeroyi DSS-3]
MTSFLAIGECMIELHETGDGLYRRGFAGDTFNTAWYAKRLLPASWRVGYASCIGQDTVSDEMAGFMAQEG
IDTCALRRLPDRTVGLYMISLDNGERSFSYWRGQSAARQLASDPDWLDSVLSGADILYFSGITLAILCPD
HRRALCDALARARSRGATVAFDTNLRPSLWEDTATMRAGLSLGASVADVVLPSFDEENGLFGDAEPQATI
ARYHAAGAGIVAVKNGGGDLTLWDGKRLHNLPATPVARVVDSTAAGDSFGAAFMAGLATGASATDAAARA
MSLAAQVVQSRGALVPGIFEREPK
>gi|56697272|ref|YP_167638.1| hypothetical protein SPO2421 [Ruegeria pomeroyi DSS-3]
MNILIIGGGGVVGQKLGRLLATRGHLRGREITRLTLVDIVDPAPIPDAAVPVETATCNIADPASVAGCIG
ADVDVIYLLAAIVSAQAEEDFDQGYAINLMGTLNVLERARALKTSPVVVFTSSIAVYGGEVPDPILDHSF
LNPQTSYGTQKAIGEMLLTDYSRKGYVDGRGFRLPTISVRPGKANRAASSFMSSILREPLNGQEAVCPVD
EDFLHYYLSPRKCVENLVKGAELDAEALGQNRCMMMPGRIWSIRQLIDAMTAVAGPQPAGLIRWDSQPEI
KRIVSGWRYDLRPEKSLKLGLSADDSFEDNVRYYLEDDRPAG
>gi|56697274|ref|YP_167639.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein [Ruegeria pomeroyi DSS-3]
MTQTLAIGPYNDNDRQALQQEFGALMLGGIAEVAGLEPAMRAGISAVAYMGHTAFGGAEMDLLPGLGVIA
NFGVGYDAIDVAAATARGITVTNTPGVLNDDVADLAVTMLLMQCRRMEQGGAWVREGHWETANFPLNRKA
SGGVAGVVGLGRIGREIADRLAAFKMDIHYFARSEKDTPGWTYHADPVSLAKAVDFLVVALVGGPETEKF
ISREVIEALGPRGVVVNISRGSTIDETALLDALERGRIAGAALDVFLNEPTIDPRFLALSNVVLQPHQGS
GTVETRAAMGALQRGNIAAHLAGKPVLTPVNKP
>gi|56697273|ref|YP_167640.1| hypothetical protein SPO2423 [Ruegeria pomeroyi DSS-3]
MEKTTVLQGFRSMTSMIFADSQPPLRAEPAFGILAGAQALNRFPDQARVASLTGTSVGFRGEGHVRFSHA
TSTENSVDPIQRIRTIL
>gi|56697275|ref|YP_167641.1| L-idonate 5-dehydrogenase [Ruegeria pomeroyi DSS-3]
MHTRVCRIHAARDIRVETDPLPEPGPAQVIVAMAAAGICGSDLHYYHDGGFGPIRVREPMILGHEGAGVV
AALGPGVTGLAVGDRVAVNPSRPCGTCSYCVEGLTTHCLNMRFYGSAMRFPHEQGLFRDKLLTDAAQCHK
LSDHVTISEGACAEPLAVCLHARHMAGEVRGKRVLVTGSGPIGVLCAAVAAEAGAAEIVVTDLQDAPLEV
ARRMGATRTVNIAREVEAMAAYAVDKGHFDLVFECSAAAPAIHSAIAALRPQGTYVQVGVTGDVPLPVNL
IVGKELCLQGTQRFRAEEFAEAVRLISSRRIDLRAMISGSFPLEQAEEAFRMAADRSRAVKVHLTFADS
>gi|56697276|ref|YP_167642.1| shikimate 5-dehydrogenase [Ruegeria pomeroyi DSS-3]
MTRAELRLGLIGTGIALSRTPAMHMAEGRAQGIATRYDLIDPDRMETPPPLTSLLDRAETEGYAGLNITY
PYKQEVLSHLHHLSPAAAAIGAANTVVFRDGQRFGHNSDAWGFAEAMRKTMPDIRLDRVLLIGAGGAGSA
VAHALTSLGVGQLLITDRDMPRALALAAATGAGALAGSEITPNMADGVVNATPVGMAKLPGMPMDPALLA
PAQWVVDIIYFPLETAFLRAARARGCRVTNGRAMAVYQAVRAFELFTGQVAQAGRMQAVFDAFDR
>gi|56697277|ref|YP_167643.1| hypothetical protein SPO2426 [Ruegeria pomeroyi DSS-3]
MIEPREDRVAAGVVLMSLAAVLFTCIDTSAKWLAGAGVPVLQIVFARYLGHFLYGLAYYLPTEGTATFRS
QAPGRQILRSFFLLGSTVLNFQALKYLPITVTATIAFAGPIVITLLAIPILGERVGIRRIVAVCTGFLGV
LIVVQPWSAAFHPAMFYSLGGLGMASMYFVMTRLLTGIESTATQQIWASGLATLVLAPFALRVAIWPEAG
LDWLVLCTIGAFGLCGHVAATTAHRWADASILAPLIYSQIFWAALAGVIVFNTWPTVWTLGGGAIIIASG
LYIWHRESAGGRHRT
>gi|56697278|ref|YP_167644.1| short chain dehydrogenase/reductase family oxidoreductase [Ruegeria pomeroyi DSS-3]
MRLTGKTAFVTAAGQGIGRASAQALVREGARVIATDRNGDLLDGLDVSRAFALDALDKAALQQAVTEAAP
DILVNCTGVVHSGSPLEATDDDFDAAMNLNVRAHFHAIQAALPAMLDRRRGAIVGIASVASHLRGLPNRF
IYGTSKAALVGLTKAVAAEYVAQGIRCNCIAPGTVDSPSLHDRLHATGNYEQAMTQFVARQPMGRLGEAD
EIAALVVYLASDESAYMTGQCLAIDGGMTV
>gi|56697279|ref|YP_167645.1| 6-phosphogluconate dehydrogenase domain-containing protein [Ruegeria pomeroyi DSS-3]
MKENNMDKAHIGFIGLGLMGAAMVECLQKAGHAVTVLGNRDRTGVEAALARGATEAAHARAVAEASDIVM
LCMGTSAQVESRIYGDDGVLAGTREGQVVIDFGTSLPASTRRIGGDLAGKGATYLDAPLGRTPAHARDGL
LNIMCSGDKATFDRVKPVLHTLGENVFHLGALGNGHTIKLINNCYSMTTACAMAEAFAIADATGIERQAL
YNVMAAGPNHSGMMDFINAYANGGRIDLAFTVANAAKDVGYYRQMATEMGLFSRMSIAADATLREARDGG
DGGLMVPQMIDWMVRHLGEEKK
>gi|56697280|ref|YP_167646.1| Gfo/Idh/MocA family oxidoreductase [Ruegeria pomeroyi DSS-3]
MSAPLPLCVIGAGCVGMRHVEVARRSPQIRLTAVVEPVETRRRALAESGLVAVATLEEVPRETRAAIVAT
PTPDHLATGLAALSRGWAVLVEKPTAGTMDDARVLLGAADRAGLPLYVGHHRRCHPFSRAAREALGGIGD
LVGLQGLWSLRKHDSYYAEDWRRQAGAGPLMTNLSHEIDLLRFLVGDMVEVSALTSSARRGLVVPDTAAL
AFRFADGALGSFLISDAGASPWSFEAACAENPAIAVSGQDYIRITGTAGALEFPSLTRWGRSAPGEIEWS
KPLARAAGAGFARVDPLLEQINRFAAVLEGAQDDVLCTGTDGNAALEMTLAAALSGKLGRPVRAHEVPGD
YSGI
>gi|56697281|ref|YP_167647.1| UxaA family hydrolase [Ruegeria pomeroyi DSS-3]
MRTVRLSDADNVVTAIAQLAPGEDGAAELIPRGHKMAARAIARGEAVLKYAQVIGYAAGDIGPGAHVHTH
NLEFRNVEAEYEFSTNLRPVAPVATLDSFMGYVRPSGRVGTRNYIAVLTSVNCSATAARMIAGHFTPDRL
AAYPNVDGVVAFVHGTGCGMAGQGSEGFEALQRVMWGYARNPNIGGVLMAGLGCEMMQIDWLIEAYGLSP
GPLFQAMNIQDMGGLRKTVDKGIEKIETMLPLVNQARRTPCPASELMVALQCGGSDAWSGVTANPAVGHA
CDLLVAQGGTGVLAETPEIYGAEHLLTARAADRATGDKLVDLIRWWEDYTARNKGSMDNNPSPGNKKGGL
TTILEKSLGAVAKGGTTPLNGVYRYAEPVTARGFTFMDSPGYDPASVTGQIASGCTLVVFTTGRGSAFGS
KPSPTIKVATNSEMYTRMSGDMDVDAGRILSGGATVEQVGREIYEMWLRVASGEQSKSEAQGLGDFEFVP
WQIGAVM
>gi|56697282|ref|YP_167648.1| TRAP dicarboxylate transporter, DctM subunit [Ruegeria pomeroyi DSS-3]
MEFLELFAWMKVGDVATISIILLIGMFILLAIGMPLGFASAFLAVAVIVMKFGPEASFGRFGSGPLSVLA
QAVYRQMTNYVLISVPLFIFMAALLERSGIARDMYSSLNIWLSRTRGGIAIVTSIMAVIMAAMSGIIGGE
VVLLGLIALPQMLRLGYNQNLAIGTICASGSLGTMIPPSIVLIFYGLVTETSIKALFTASFLPGFMLASF
FIIYIIVRTNLNPSLAPLPEPDPDDPPGRVKALLFLAFLAKFATYGALFFVGLLLLISAFSGGTMSDDGV
TTMWEVLRVRIAKLLVVAAIGFVVSRLLGKERTSLGWDMGKGLVAPIVVVGVVLGSIYGGITGITEAAAM
GTIAVFVIGLIRREMTVDVVWDSLMRTLKSTGTIIWVTIGAASLAAAYTLAGGPTFVANLIVTSELPTMG
VILVMMVIFLIMGMFMDWVGIVLLIMPVFLPIVLKLPVAEIGFLGELEPRHVAIWFGVVFCMNMQVSFLS
PPFGPAAFYLKSVAPPHISLTAIFRGFLPFIMLQLCALAVLLIWPNIVTLFL
>gi|56697283|ref|YP_167649.1| TRAP dicarboxylate transporter, DctQ subunit [Ruegeria pomeroyi DSS-3]
MSVFCASLYLSDIRGAIEEEANGFFDILSLVTSRAAMIMIAFVVLVMFYEVVSRYVFSRPTLWANELSLW
IASFVFLFAGQYAMQQRSHIRIYVIYDIMPRWAQKTSDVVSVLLIVVFTFALVWGNYADAERRFLRMETF
GTAWDPPIPGIVKPAVLIIIVLVALQAISNLIADWHKAPEHHSPLDDIDETEIEHIRKTLEK
>gi|56697284|ref|YP_167650.1| TRAP dicarboxylate transporter, DctP subunit, putative [Ruegeria pomeroyi DSS-3]
MRWVFQIWYTKKKLIVETLLASVLADGIPSLSARLAREPETAAIERRQGRRITMSLKFIYVAAGAAALAA
TTALADPVTLRVQTHYATEHPTGKQLAIWADDVQTMSGGDITIEMFYSSSVVATTETFDAAINGILDCDA
TGGAYQTGKNPAFQFVGDIMGGYDTPWQQYSWLYFGDGYAAAQELYNAQNMQLIGWAIYGQESLSSSKPI
RGFEDLKGWKFRSPPGMETEIFEKLGASPIVMDFTEIFTALETGIIDGADASGLYNNVGLGLYDIVKHAT
YPGFHSMPSDHLACNLDVWNGLTDQQRRIVDTAWQKLGFQIALSNELNNNAAAAKLRAEGVTLHNWSAED
RAEFRKAAQAAWDDWGTRSPEAGALLASHKSYLTQLGLLN
>gi|56697285|ref|YP_167651.1| GntR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MTGKSVREVPMTEEILAESIALRLRRDILRGKLVPGTSIKERDNAAEMGVSRTPMREAIRILANEGLVQL
RPSRSPIVTQLSLNEVVSFIEVLSALEMLAVTLACERATKIDIAHVRGAERKLATQYDRIDQVERFELDM
DFHIALTRASHNQALSDTHMSYLRRLWYARFQSARNRHTKDRVLQQHAALVDAIERRDPTMAQTELSSHL
ENLRINVHAYFERAEREQLQLKNSA
>gi|56697286|ref|YP_167652.1| fumarylacetoacetate hydrolase family protein [Ruegeria pomeroyi DSS-3]
MKLLRFGPAGAEKTGMLDADGNVRDLSAHVPDLSGAAVSIEALDALRAIDPATLPLVADPGRIGACLSSV
PNFFCIGLNYAKHAAETGATPPSEPILFSKTTSCLSGPNDPVIIPRNSVKTDWEVELGVIIGRSALYVDE
ADALDYVAGYCTINDVSERAFQAEMGGQWIKGKSAPSFGPIGPWLVTADEVPDPQALDLRLSLNGKVVQD
SNTDDMIFSVAQIVSYMSRFMQLQPGDIIATGTPSGVGLGMKPPLFLKPGDTMELSVQGLGSQRQVAVAA
D
>gi|56697287|ref|YP_167653.1| FAD dependent oxidoreductase/aminomethyl transferase [Ruegeria pomeroyi DSS-3]
MTASLPDKARVVIIGGGIMGCSVAYHLAKSGWSDVVLLERKTLTSGTTWHAAGLVGQLQGSHATTAFASY
GVELLQEIERETGQNPGFRQSGSISIAVNEERLAELKRKADFARLFGVEAHYMQTAEIAERWPLMNAEGV
LGGIHMPSDGSANPVDLTQALARGARKYGATIRENVKVEKVLTANGRVTGVRSDHGTIMADFVVNCGGMW
ARDLGRQNGVGVPLHACEHYYLVTEPILDLPADLPVLRSYCDGTYWKEDAGKLLFGFAHFHAKAWATGGI
PDSFEFDSLPFVEDDVIEVLDLAMNRVPILQETGIRTFFNGPESYSHDGRFTLGEAPDLKGYFVLAGVNS
TGIQSGSGAGRAVADWIMTGHPPMDLSEMDPARIEEWQARDPYLRDRCPETLVLTYAMHWPGRQRQSARG
LRRTPFYHVMKAHGAAYGEVQGWERPGWFAPGGETPVYDHSFYRPGWFDHAQAEQRAVRGAAGLIDYSML
GKLMVEGRDAEAFLQRACTNDMALPVGRVAYTLMLNDHGGIESDVTVARHGPDSFMVMSAISHTRRDRDH
LRNLIRPDEDVRLRDATSAYAVLSLCGPKSRQILADVADIDLSDAAFPFNSLARFHIGHAPVFAQRLSYT
GDLGWEIFVTPDFAEHVFDVLMASGAPQGLRLVGGEALNALRIEAGFAHWGHDMAYTEAPHQVGLGFVCK
PDKAVPFIGRDACLARKAAGKGPFLCSIRLTEGTPLLHHNEPVLQGGAVVGFVTSGAFSAAAGSAIGLCM
VSPPEGGGRRDLETGAYSVLVEGREVPARLSLRALWPLAEDG
>gi|56697288|ref|YP_167654.1| Asp/Glu/Hydantoin racemase family protein [Ruegeria pomeroyi DSS-3]
MQNAASSPPSVIETLAFETDAGLGQRARIGLIVLQTDQTIEHEFAHLFGGEGVALYHARIPNAMEVSPET
LRQMQVDLPRTAALLPASFDFDAIGYACTSGATMIGEARVDEMIRAEHPGARTSNPITACKAALSALGLR
RIALLTPYPPEVTLEMQANLRAAGFQTAAVASFNQSDDFTVARISAQSILDAAVTIGARDEVEGVFVSCT
SLRALDVIAEAEARLGKPVIASNQVLAWHLMRLAGLDGAPEGAGRLFAAG
>gi|56697289|ref|YP_167655.1| phytanoyl-CoA dioxygenase family protein [Ruegeria pomeroyi DSS-3]
MGLLSQEQKDAFWRDGVLVVEDAVSPGELAALRAEFAGWVEESRARTEDYGETLDGRARFDLQPGHCADK
PALRRVQSPEEVSEVFADTMRKARTVDYCAELIGPGVRFHHGKVNSKLPGSATQVKWHQDFPFEPMTNDD
MITCLLFIDDVTLENGPLEVIPGSHKGPIHSHWHNGVFTGAVDDEIVEAQRDRIVKCTGKAGSVCLMHAS
LLHGSAPNLSDQPRTLYITTYYAEDAIELSPNHLPSRFTHELVRGEASGRVRCTAYQMELPAVPKGTSFF
AQQEGSDGAGAGAMM
>gi|56697290|ref|YP_167656.1| GntR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MNDATPDQLRTGPSRETPRFQQIVQDIKRRIADGSLSEHAALPSERRIAEETGISRMTARRALDALEAEG
LVYSADRRGRFVSPKRVSYDVSNLVSFVADAESRGTALGIEVIRAQEGKADPALAARLELEPGAAIHEYT
RLFRQDGHAIFVETEYVDARRCPDFLSHDLHQSTTRLLESQYDLVARTGDIVIRMRGAHPEETHLLGLAQ
SQSGIELTQVIRDASGRPFCFGRQFWRGEMAEFSARAIVGGSIHG
>gi|56697291|ref|YP_167657.1| M24 family metallopeptidase [Ruegeria pomeroyi DSS-3]
MRGFTPAEFQARTTRAQERMAAQGLDGLLLMSEPDLRYFSGFHTLFWQSPTRPWFLFVPASGKPIAVIPE
IGAELMRRGWLDDVRTWPAPRPEDDGISLLTELLSPLAARGARLGVMKGHETLLRMPLGDWERLLAALPG
LEIADATGLVQGLRMVKTPAEIEKLAHICAIGSATFEAVPQFVSEGMPLDAVFREFRRTAIGLGADDAPY
VVGAADQGGYADVISPPTQQPLRAGDVLMLDTGCTWDGYFCDFDRNWAIGQADDAARRAYDVLWRATQAG
IDAARPGATCRDLFQAMSAVIAELDDSGGDIGRLGHGLGMQLTEQPSHAAFDTTVLQENMVLTIEPSLSY
GDGLMMVHEENIVVTDGTARLLSTRAATELAILR
>gi|56697292|ref|YP_167658.1| glycine betaine/proline ABC transporter, periplasmic glycine betaine/proline-binding protein [Ruegeria pomeroyi DSS-3]
MNNPMNLARSVIAVAAMTSASAAWAECGEVSLTEMNWPSSQIITHTAKFLMEQGYGCTVELVPSATVTSV
ASLAENGEPDIVTELWLNSAGEAYLKLEAEGKVERLAEVFNPGGLEGWWIPTYLAEANPELTTVAGILAN
PDLVGGRFNNCPVGWGCRIVNDNLITALGMRDKMEIFDHGSGETLATSIAAAYEDKTPWFGYYWAPTAVL
GKYPMTQISIGDIDMDVHLANQSAENANPGVSDFPPAPVLTVATSALTERAPDVADLMRNVSFDIEVMNA
VLAWKDDNGASAEEAAVYFLSNNSDVWAGWVNDAAREKLAALIK
>gi|56697293|ref|YP_167659.1| glycine betaine/proline ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MATYDFLFNSLGLRDWCDAGKTGEATLSMADLLAKAGGKTETSLFNLPFPSLDELNRACAAFAKSRDVTK
GVEEGFLAAKGVLRFVLDPLTQPLSWMLEFALATFEATPWWIMMPLLALVVFFASRSMRLVGFVMACLMF
LAFVDHYDHAMQTLAIIFVCAFLCVLFGVPIGIAMSRNDRLQRMTIPILDMLQTLPSFVYLIPLIFLFSV
TEPKLYGIAIILYAIVPVIRLTDLGIRLVDRDVIEAADSFGMTDRQKLFGVQIPLALPNIMAGVNQTIMM
SLAMVVIASLVSAPGLGVLVLRGIRNLELGVGLVSGLGIVLLAVILDRVTKAALNRVNAAQQH
>gi|56697294|ref|YP_167660.1| glycine betaine/proline ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MSDNIKVSIRNLYKIFGADPKAALKHVLEGMSKADLLKQHRHVLGLRDINVDMREGEITVIMGLSGSGKS
TLIRHLNRLIEPTSGEVRVDDKDVLAYDEEQLRNLRREVMSMVFQKFALLPHKTVAENAGTTLKVRGVAK
RDYLVEADKWLDRVGLHGYGNHYPHQLSGGMQQRVGIARALTSNSPIMLMDEAFSALDPLIRTDMQDLLL
ELQTELHKTIVFITHDLDEALKLADHLVILKDGYVVQQGEPQHILLNPNDPYIEDFVSDINRARVLRVRS
IMTPLDGQPVPPDAHGEVDYDDTLESMIARSGGDTSHRYVVIRDSAPVGTLDMTHLVKALVPRVATEASA
RKA
>gi|56697295|ref|YP_167661.1| nucleoside diphosphate kinase [Ruegeria pomeroyi DSS-3]
MALERTFSIIKPDATRRNLTGKINAKFEEAGLRIVAQKRIHMTKEQAGVFYGVHAERPFYDELCEFMSSA
PVVVQVLEGENAIAKNREVMGATNPADAAPGTIRAEFAESVGENSVHGSDAPETAAVEIAYFFSGIELVG
>gi|56697296|ref|YP_167662.1| Bcr/CflA subfamily drug resistance transporter [Ruegeria pomeroyi DSS-3]
MGWSGARDRDSADLPSKPPDPLMRHASNPPHLITLVLLTALSVLTLNMFLPSLAHMGQDFEVDYGLINLA
IAGYLGVSAILQLIIGPLSDRFGRRPVLLIAMAIFLVASIGCVLAGSIWVFLGFRLLQAAVVAGPISSSA
SIRDQYPPNEAASKLGYVAMAMALAPMLGPMLGGALDMLFGWRAGFVLYSILGAVMLALLWVDFGETNTE
RSVTFKAQWQQYPHLFRSRRFWGYALCASFSIGGFYAFITGAPLVAAAWFDLSPALLGLGIGIITGGFMV
GNFVTGRIAARTRLTTMILLGRIIASTGPAIGLILFLTGAGSVWVFFGSAVLVGFGNGLTNANAVAGLMS
VRPRLAASAAGLSGALTVALGAVLTTVTGIVVSAENAPFAVLGLMSGSSFLGLLAVLYVRWVDLREPLPD
T
>gi|56697297|ref|YP_167663.1| ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MLRIENITYAVEGRPLFDGASAVIPDGHKVGLVGRNGTGKTTLFRLIRGELALETGTIALPRRARIGGVA
QEAPASDVSLIDTVLAADTERAALMAEAETATDPIRIAEVQTRLADIDAWSAPARAASILKGLGFDDDEQ
LKPCSDFSGGWRMRVALAAVLFSQPDLLLLDEPTNYLDLEGALWLESYLAKYPHTVIIISHDRGLLNRAV
GAILHLEDRKLTLYQGPYEQFARQRAENLAQAQAMAKKQEARRAHLQSYVDRFRYKADKAKQAQSRLKAL
ARMQPISSPQEAALRAFTFPKPEEMSPPIIHLEGGVTGYGQTEVLKRLNLRIDQDDRIALLGKNGQGKST
LSKLLSDRLPLMAGRMTRSPKLRIGYFAQHQVDELYVDETPLDHLRRLRPGETPAKWRARLAGFGLGAEQ
AETAVGRLSGGQKARLSLLIATLDAPHMLILDEPTNHLDIESREALVEALTDYTGAVILVSHDMHLLTLV
ADRLWLVSDGSVKPFEGDLEAYRDFLLARDKPESPKPAEAKPKRASRDTVLALRAELRKCEERVEKLSEM
HDKLAAKLADPALYADDKVSDLEVWNRKYAELKDAMERAETLWMEAQEKLDAVQAT
>gi|56697298|ref|YP_167664.1| acetyltransferase [Ruegeria pomeroyi DSS-3]
MDGGAGEARRGAGDMIVRQAGPADAAAMSAVLHPILTGWNSARSGDAETVLTRYIDDPDRLSCAVACEGE
RILGFQSLKLARAGNVYDLPAGWGIIGTYVAGDAGRRGIGRALFTETLAAARRAGLAHIDATIGADNAQG
LPYYSALGFQTWRELDGAVGKRFDLSATEQTEGT
>gi|56697299|ref|YP_167665.1| MarC membrane protein [Ruegeria pomeroyi DSS-3]
MIDTAFLITAFTTLFVVIDPPGQTPIFMALTQGMDSRTKRAIALRACLTAAGILAMFAAFGEAVLGFVGI
SMPAFRVAGGVLLFLTALDMLFERRTKRREDRAEAEEHADPSVFPLGIPLIAGPGSIATMILLAGQHPGA
EGLATVIAVMLAVLAVVLFLYLISGLLGRLLGKTGLNVVTRLLGMLLAALAVQFILDGLRAFGFAS
>gi|56697300|ref|YP_167666.1| hypothetical protein SPO2449 [Ruegeria pomeroyi DSS-3]
MDADNTAHLIYLSLLGAALVFWFISHNRASLGKTLQMALAWVFIFVGVIAVVGLWGDIRSTVAGTPRISV
SENRVEIPRSPDGHYYATLIIEDKPLRFLVDTGASQVVLSHADAERLGIDTSALNYFGRAYTANGEVRTA
PVKLGRVQLGGFTDQGVTAWVNEGEMSESLLGMDYLQRFRSIEIAGGTLVLAR
>gi|56697301|ref|YP_167667.1| Asp/Glu/Hydantoin racemase family protein [Ruegeria pomeroyi DSS-3]
MSHFPYDLTAPIGCAATLGLIVLQADETVEQDFQRLFAAPDQALYVTRIPSGADVTPETLRQMERDLPHS
ASLLPPSVAFSTVGYACTSGATMIGPDRVAELIRGACDTQASTDPLTAARAALRALGITRLGIVSPYVAS
VAEPVRQALGAAGVETPETLSFGEASEARVARIDPASIRAAALELGRRGGLDGLFLSCTNLRTLDVIDEI
ETELGLPVVSSNLALAWHMASQAGLTLPDAPGRLMRQLAG
>gi|56697302|ref|YP_167668.1| acyltransferase, putative [Ruegeria pomeroyi DSS-3]
MTQTPVSRDAATASAPVRLIKLVVLILLGPLYFLVIAFVPLLCARRRGFRGWYWRLVKRACSRLLWLLGI
RVEITEAERAALAQDRDSIIVINHRSHLDGFALMDAVPDAKWFTFAAKKELCRHPLLRTGFTGAGLVEID
RKNGSLAMETLSAAVREMPARRSVVLFPEGTRTGGETLGPFKAGAVLAARASGRTIRPIVIHDSDRLLPR
GRVLPQGGAIRVEVLAPFVCDPAAPVDADVARLRAAMLAAFDRD
>gi|56697303|ref|YP_167669.1| DNA polymerase III subunit chi [Ruegeria pomeroyi DSS-3]
MGAAYFYHLTRNPLEATLPVLLTKALGAGWRVAVRGSDPGRLVWLDEKLWLGPDDGFLPHGLAGGAHDAD
QPVLLTTGADAPNGARCVMSVDGAAVTPEEVAALERVCILFDGTDPAAVEAARGQWRALTAAGCAAQYWS
EESGRWEKKAEAGG
>gi|56697304|ref|YP_167670.1| leucyl aminopeptidase [Ruegeria pomeroyi DSS-3]
MTSPTPIRFEMPDLDAMAAATGRVAVIVPPEGKLDPGARRANRLTRGALARLVESDRFAKLKPGQVVSLA
WPAGMAAEALDVLVLPRRADALTARKGGAALAKLAGGKPLLLMAGGQVRAEQLALGIALRAYDFTAHKSK
PEEEAAEATDASVTIAHNKAEEIAAAYAPLAALAEGVHMTRDLVNEPANVLTTTEFANRLKEMEALGLEV
EVLEEDKLEELGMRTLLCVGQGSDSPSKVVVMHWKGGDKDAAPLALVGKGVVFDTGGISLKPAAGMEDMT
MDMGGAGVVAGTMRALALRKAKANVVGLVGLVENMPSGRATRPGDVVKSMKGDTVEIINTDAEGRLVLCD
VMWYAQERFKPTGMIDLATLTGAIIIGLGHENAGVFSNDDTLCNAFLKSAGDEGEGAWRMPLGKAYDDML
KSRIADMKNVGGRPAGSITAAQFLARFVQEGTPWIHLDIAGVASVTAETDMAPKGATGWGVLALNRLVDR
LAE
>gi|56697305|ref|YP_167671.1| YjgP/YjgQ family permease [Ruegeria pomeroyi DSS-3]
MILDRYFARRFIQSFLVIGLVFLGLVLLIDLIEQLRRFEGFEVSMGQLVGLTLLNAPAAISEILPLLMIL
STIVLFVGLARSSELVVTRAIGRSGIRALVGPVLVALVIGLLAVTTLNPIVAATAVRYQTLADTYRNGGP
SVLSLSDEGLWLRQGDAGGQSVIHATGFGGDGVTLFDVTILSYAPDGSAQRRTIAESAQLQDGKWLLQKA
KVWPLKVGQNPEANAVYHDRIEMPTSLTQERIRDSLGRRETVSIYDLPQTIEQLQQAGFSTKRHKVWLQV
ELARPLFLVSMVLVGAAFTMRHTRFGGTGLAVLSAVLLGFTLYFTRNFAQILGENGQIPVALAAWAPPVA
AIMLTFGLLLHAEDG
>gi|56697306|ref|YP_167672.1| organic solvent tolerance protein, putative [Ruegeria pomeroyi DSS-3]
MRALLSTLLSGVACLHLAGAAAAQTLPATPAEQTEAQPAVLVADSVFITPERQLIAEGNVEAFQGDIRLR
ARKITFDRQSGQLNIEGPIRIDQGGQITVLADAAELDKNLQNGLLTGARMVFDQQLQLAALQMTRVGGRY
TQLYKTSVTSCHVCENGKPPLWQIRAQKVIHDQLEQQLYFEGAQFRVLDVPVFYFPAMRLPDPNLKRATG
FLIPSIRTTSQLGTGVKVPYFFRLGDHRDLTLTPYVSSKTKTLNLRYRQAFARGRIEIEGAYTRDDLIRG
EDRGYVFATGQFDLRDDYKLKLGVQTVSDNGYLADYGLPEYDRLRSEVSIERFRRDSAFRIGLIHYETLR
DSEIEAEIPTEIFDINAEKRYFPTGLGGEVRLAFDGHAHQRQSSANVVGRDIARATLDAEWLRSWTFASG
LRADWRMGVAVDDYRVWDDTNYASGTLRSAPRAALTLRYPMVYRGATGTHYLEPIAQLGWSDVSGAPLPN
GESNFVEFDQGNLLALSRFPANDQREEGKRAVFGLNWARFSTSGWQAFATIGQVFRSTSDPRFSKSSGLG
GTASDLLLAGQITLPQGLGLTARGLLDGSLNFSKVEVRGSWTDDRTSVSGSYLWLGRDLAENRALAVSEF
WFDGSYKVNPYWTASANIRYDIEDSRATRAGIGFAYQNECVTVNISVNRRYTSSTSVEPSTDFGFTIALS
GFAVESANKEYRRSCSKT
>gi|56697307|ref|YP_167673.1| peptidyl-prolyl cis-trans isomerase domain-containing protein [Ruegeria pomeroyi DSS-3]
MQQNLTTLSRCLARMMGAAALTLTLAGGPVAAQSLFSPAIRVNQGVITHFELEQRIRLMEVLRIPGDPQK
DARRSLIEEALKMQAVEEAGIEVAPEDVQLGIDDFAARARLSTDEFLAALANEGVSAETVRDFVSKQMAW
RDYVSARFLARARPTPDEIDRALGLGGGGGLQVLLSEIIIPITPQTVDQVDEVAQQIAALTSYEAFSSAA
IQVSAAETRENGGRMPWIPLAQLPPALQPVILELEPGEISDPITLPNAVALFQMRGLREAAVGTPRYAAI
DYAAYRMAGGRSPETLKAATELRQRVDTCDDLYGVAKGQPAEVLERISAKPAEIPQDIALELAKLDPGET
SLALTRNNGQTLLFLMMCTRTRDLGGDASREDVANALTQQRLQTLAESLVEQLRADAIITEE
>gi|56697308|ref|YP_167674.1| 4-hydroxythreonine-4-phosphate dehydrogenase [Ruegeria pomeroyi DSS-3]
MRPIALSCGEPAGIGPELAAAAWSALRADCPFVWIGDPAHLPSGTPVTLLDDPARAVAASDSALPVLALP
FAAPTQPGRPDPRNAAGVIAAIERGVALVQSGACSALCTAPIHKKALIDGAGFAYPGHTEFLAALAGCDR
VVMMLASDQLRVVPATIHIALSEVPRALTPALLRETIEITAAGLRDRFAIAHPRIAVAGLNPHAGEGGAM
GHEEIDWIARLLQEITGDFTLTGPHPADTMFHAAARARYDAAVCMYHDQALIPIKTLDFDRGVNVTLGLP
FVRTSPDHGTAFDIAGQGIANPSSLIEALKLAQRMAASG
>gi|56697309|ref|YP_167675.1| dimethyladenosine transferase [Ruegeria pomeroyi DSS-3]
MSAIDTLPPLREVIASHQLSARKSLGQNFLLDLNLTAKIARQAGDLSECDVLEIGPGPGGLTRGLLAEGA
RRVLAIEKDARCLPALAEIAAAYSGRLEVINGDALEIDPLAHMTPPIRIAANLPYNVGTELLVRWLTPRD
WPPFWQSLTLMFQREVAERIVAKPGSKAYGRLALLAQWRAEARIVMSLPPEAFTPPPKVSSAVVHLTALP
EPRFPADAAILSRVVAAAFNQRRKMLRAALKGQAPDIEDRLLAAGIKPTERAEQVPLEAFCALARELAR
>gi|56697310|ref|YP_167676.1| hypothetical protein SPO2459 [Ruegeria pomeroyi DSS-3]
MSGNTNRKRRRTGSSAKTNKADVKHMRSSKSRSRSKNNRNRPSGGNVVNRVFDSSGPEGKVRGTPQQIIE
KYNQLARDAQLANDRVAAENFQQHAEHYLRLLSEAQREIDARREEQERQNRERQAERDRERAERQDRDSI
APAPVADPSSAPQPDVLDLGGSDAGEEASGLVETPESKGESRKRRAPRAEEDAPASDEAGEQPKKKTPRR
PRARKPAAGEGETPDPQPGGPAEAAE
>gi|56697311|ref|YP_167677.1| HemK family modification methylase [Ruegeria pomeroyi DSS-3]
MVAATARLRAAGVADPARDARLLLAHAARIEASRVTLIAPEDLAPEIAERYDQLISLRAVRVPVSHLVGE
RDFYGRRFKVSGEVLDPRPETETLIEAALNAPFEHVLDLGVGSGAILVTLLAERPSATGLGVDLSEAACL
QASANAVLHRVEARADIRRSDWFGAVEGRFDLIVSNPPYIALSEMEALAPEVRRHEPELALTDGGDGLGA
YRHIAAGAPDYLLPGGRLLVEIGPTQAQAVSRLFQAAGLSGLRVIPDLDGRDRVVAAHLPR
>gi|56697312|ref|YP_167678.1| peptide chain release factor 1 [Ruegeria pomeroyi DSS-3]
MIPEERLDQITQRFQYLEAAMADGASGSDIAALAKEYSDLRPVVEQIAAWRQLCADMDEARAMLSDPDMK
ALAEEELPLLKARLPEAEQALQLALLPKDAADARPAMLEIRPGTGGDEAALFAGDLLRMYQRYAEARGWK
LELIELQETELGGIKEVVARISGENVFARLKYESGVHRVQRVPETESGGRIHTSAATVAVLPEAQDVDIQ
IDPGDIRIDTMRSSGAGGQHVNTTDSAVRITHLPSGIVVTSSEKSQHRNREIAMQVLKTRLYDLERQRLD
RERSASRSAQVGTGDRSERIRTYNFPQGRMTDHRINLTLYKLDAVMQGDLDEVIDALAADGQARMLAEMG
Q
>gi|56697313|ref|YP_167679.1| hypothetical protein SPO2462 [Ruegeria pomeroyi DSS-3]
MVKGRVCARFVAMTRLFALLLLLAPPALADVVGPGGKTIDCYCTDTSGTRIELGETICLMVDGRMFMAQC
QMSLNVPMWREVQQGCLSSGLVPERRQPLLNTRAVYPKI
>gi|56697314|ref|YP_167680.1| hypothetical protein SPO2463 [Ruegeria pomeroyi DSS-3]
MRMLIWGMIALAVLGLVWIRLAPSDPARWHRAPQISADRDMRGGVLRRVETGADGLARFDAIARTAPRTR
VLAGSVAEGMVTYVTRTRVFGFPDYTTALQQGDLLLIHARNRFGRSDLGVNRARVEQWLTSLGH
>gi|56697315|ref|YP_167681.1| agmatinase [Ruegeria pomeroyi DSS-3]
MSDFNQPIGGNDLARFSGPNTFMRLPQAQALDGLDVAILGIPMDIGTSWRSGTRFGPKQIRAESAMIRPY
NMATGAAPFDSLQIADIGDLAINTFSLADSLRIIKESYDAILTHDVIPVAMGGDHSITLPILRAIAARHG
PVALVHVDAHADVNDQMFGERETHGTVFRRAYEEGLIQPDKTYQIGIRGSGYAATDFTEAQGWGFQQFPA
WELWHKSLVNLGTEIRRDIGDRPVYVTYDIDSLDPAYAPGTGTPEIGGLTTPQALELIQSLRGLKIVGCD
LVEVSPPYDTSGNTALTAANLLYELLCVLPGVQAR
>gi|56697316|ref|YP_167682.1| hypothetical protein SPO2465 [Ruegeria pomeroyi DSS-3]
MDINLLVKLTARAWSLPILAHLNRGVPGRQAPLLAATGAGRTAFAASLAHLAQLGLLERNPGHGHPLRPE
FRLTATGQEAAAMAARLIGTVSGTAQDALLRRSWTVPILALTGQPRRFSAIRSDLSPITDRALSVSLKQL
EDHDWLRRDLDLSQRVPFPIYSAANLGAELNRAIGLEGG
>gi|56697317|ref|YP_167683.1| glyoxalase family protein [Ruegeria pomeroyi DSS-3]
MPLATLDNTITLALSVRDRHASAKWYRETLGFELIHHIDEAGWSEMHTLTPGVTLGLGEQAEPAPGNSVP
VFGVADIATARAAMEAAGIRFDGPTETIEGMVSTATFYDPDGNALMLAQDLTQSA
>gi|56697318|ref|YP_167684.1| agmatinase [Ruegeria pomeroyi DSS-3]
MKVALEDAKKQVDEAFTNPELKGLSFENTFGGATSFLRRLYTKNLTGVDIAVTGVPFDQAVTNRPGTRLG
PRAIREASALQSPDAPYGWPFDALSELAIVDYGDVAYDYANIPAFPDTLSDHIRTILAADVASVTLGGDH
YISFPILKAYAEKYGPMSLLQFDAHTDTWADDDMSRVDHGTMFYKAVKSGIVDPARSVQIGIRTTNEDTL
GVNIIDAREVHESGPAAVAQKVRAILGDSPVYLTFDIDALDPAFAPGTGTPVWGGLSSAQAQIILRDIAG
INIKGGDVVEVSPPFDPSGATAIAGAHVATQIICLLGWNKLGGAAAG
>gi|56697319|ref|YP_167685.1| amidohydrolase family protein [Ruegeria pomeroyi DSS-3]
MPVINRIADFAADMTAWRQHLHTIPELEFDCHQTAAFVAERLREFGVDELHEGIAKTGIVAIINGQGDGP
TIGLRADMDALPIPEETGLAYASTHPGKMHACGHDGHTTMLLGAARYLAETRNFSGRVALIFQPAEEEGG
GADIMVREGILDRFDIAQVYALHNAPGHAEGSFYTAPGPLMAAVDTFEIHIQGRGGHGAMPHETIDPVMA
ACGIAQAIQTIVSRNHYALDDLVVSVTQIHTGTVNNVIPDTAYLNGTVRTFDPAVQKMVMRRMREIVAGQ
AASYGVTAELDYQVGYPATINDAAKTEFAAEVAREVSGAANVVGDGGREMGAEDFSYMLEKRPGSYLFIG
QGDSAGLHHPKYNFNDEIAPVGASFFARIVEKAQPVA
>gi|56697320|ref|YP_167686.1| nucleoside triphosphate pyrophosphohydrolase [Ruegeria pomeroyi DSS-3]
MPDDTLIHDQSAGIERLLEIMRRLRDPKTGCPWDIEQDFATIAPYTIEEAYEVADAIERGAWDELKGELG
DLLFQSVFHAQMAAEAGHFTFQDVVRTMSNKMVTRHPHVFGDETRDKSAEQQTRDWEAIKATERAEKAQQ
GALDGVALGLPALLRAFKLQKRAARVGFDWGDVGPVLDKITEESRELVEARDSLDADAIEDEFGDLLFVL
VNLGRHLGVEPEAALRRTNAKFTRRFAQIETRLAAQGKTPENSTLDEMDALWNEVKAEEKARP
>gi|56697321|ref|YP_167687.1| inosine-uridine preferring nucleoside hydrolase [Ruegeria pomeroyi DSS-3]
MPPRKIIIDTDPGQDDAVAILLALASPDELEVLGITAVAGNVPLPLTAKNARIVCELAGRADVAVYAGCD
APIARKLVTAEHVHGKTGLDGPDLPDPVMPLQEAHAVDFIIDTLRAHAPGTVTLCPLGPLTNIATAFTRA
PDIVSRVQEIVLMGGAYFEVGNITPAAEFNIYVDPEAADIVFKSGAPIVVMPLDVTHKALVTKARNDAFR
ALGTPAGIAVAQMTDFFERFDKEKYGSEGAPLHDPCVTAYLLNPDLFSGRHINVAVETTSELTLGMTVAD
WWRVTERAPNALFIGDLDAEGFFTLLTDRLARL
>gi|56697322|ref|YP_167688.1| acetyltransferase [Ruegeria pomeroyi DSS-3]
MSAALHLARPEDLDRLTAMVGAFHAEEGLQGSEEARRDALRPLLEGIPHGCVYLIGPARAPLGYIIVTFG
WSVEFGGLDGFIDEIWLRPAVRGRGIASEVLGQLPKALASAGMKALHLEVDRRNEAAQRLYARARFQPRP
DYMLMSKRL
>gi|56697323|ref|YP_167689.1| hypothetical protein SPO2472 [Ruegeria pomeroyi DSS-3]
MAGSAAQALDDQPHDQLNHQSGDTAPDQIAGQGAKISATRAHQAAQKLTATQSTQRAGDCVAHAAHIRLT
HQFAAPGASERATDELCDDLFHDVSLFDAVAFAA
>gi|56697324|ref|YP_167690.1| haloacid dehalogenase, type II, putative [Ruegeria pomeroyi DSS-3]
MMSLGIGRKDRGMKPLIQACLFDVFGTCVDWRGSVSRAVAAAVPGVEAEAFATAWRAQYDPAMARVREGA
RGYVALDELHLENLDTVARSFAVEIPDRVLLNAAWEQLDPWPDVVAGLTRLKREVIIAPCSNGSIALMTR
LARHAGLPWDCILGADIARGYKPQPEVYLASCAALRLPPEAVMMVAAHNDDLIAARAAGLRTAFVPRPTE
HGPGQVRDLIAQSDWDVIAGDFIDLAEKVAALGPGGGVSRAGA
>gi|56697325|ref|YP_167691.1| phosphopyruvate hydratase [Ruegeria pomeroyi DSS-3]
MSTIIDIHAREILDSRGNPTVEVDVVLEDGTMGRAAVPSGASTGAYEAVERRDGDKSRYMGKGVLEAVAA
VNGEIAEELVGFDATEQVAIDAAMIELDGTENKGRLGANAILGVSLAVAKAAADFTAQPLYRYVGGTSAR
VLPVPMMNIINGGEHADNPIDIQEFMIMPVAAEDIRDAVRMGAEVFHTLKKELSAAGLSTGIGDEGGFAP
NIASTREALDFVLKSIEKAGYKPGEDIYLALDCAATEYFKDGKYVLSGEGKTLSSDENVDYLAALVADYP
IISIEDGMAEDDWAGWKALTDRLGGKVQLVGDDLFVTNPARLAEGITRGCANSMLVKVNQIGSLTETLKA
VDMAHRARYTNVMSHRSGETEDATIADLAVATNCGQIKTGSLARSDRLAKYNQLIRIEEALGEVAEYAGR
SILRG
>gi|56697326|ref|YP_167692.1| hypothetical protein SPO2475 [Ruegeria pomeroyi DSS-3]
MAAPRPGPLRPARGFAPMNNVNGILLVVAAMAAFSIEDMFIKKLSVTVPIGQILLVLGVFCSAAFLTMAV
ATRKRVFSRAAWSPLLLIRAATEAVSALTFATALSLVDLSTVAAVFQAMPLVVTMGAALFLGEQVGWRRW
SAITVGFVGVLMIIRPGMAGFQPAQLLVVASVISVAARDLITRRIDAHVASAVVSFQAYLALILGGAGIL
LVSGTALVPVEPGHWGPYAGAILFGVLGYYGIVTAMRVGEASVVTPFRYTRLLFSLLAGVLVFGERPDWP
TLAGGALIIGSGLYTFLRERRLARELAAVPA
>gi|56697327|ref|YP_167693.1| putative lipoprotein [Ruegeria pomeroyi DSS-3]
MTRLLATAALCLATATAAAACPWAGGNFEFREHGIYGDFAVNAGCTELVWDRLSNAPETTALTRSKHGWA
GKLAKADVELLDNGENLRVTGTGGAMRQVRAKRAD
>gi|56697328|ref|YP_167694.1| FUR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MSQPIIARCEAKGLRMTGQRRVIARVLEESDDHPDVEELYARASKMDSAISIATVYRTVKLFEEAGILDR
LEFGDGRARYEDAERDHHDHLIDMNSGEVIEFCDPEIEALQERIAEKLGYRLKGHKLELYGVPIRKG
>gi|56697329|ref|YP_167695.1| hypothetical protein SPO2479 [Ruegeria pomeroyi DSS-3]
MTADMHAEDIIRRLELEPHPEGGWYRQTWIAENPGRASGTCIYFLLKSGERSHWHRVDATEIWLWHAGAP
LVLSMSETETGPASDHLLTPDLDAGAPQLIVPPGWWQAARSTGEYTLVSCTVSPGFRFEGFELALPGFDI
PRA
>gi|56697330|ref|YP_167696.1| hypothetical protein SPO2480 [Ruegeria pomeroyi DSS-3]
MVRPAYLGPMTIAIPFDNSYARLPGGFYTAQAPQPVRAPRLVAFNADLARLLGIAPGEVEEMAQVFAGNA
VPQGAEPLAQLYSGHQFGNYNPQLGDGRAILLGEVLGSDGIRRDIQLKGAGRTPYSRGGDGRAWLGPVLR
EYVVSEAMAALGIPTTRALAAVETGETVRRESALPGAVLTRVAQSHLRVGTFQVFAARGEIAHLKRLTDY
AIARHYPDAQGPMGLLAAVRDAQARLIARWMGVGFIHGVMNTDNSSIAGETIDYGPCAFMDTYHPDTVYS
SIDRYGRYAYSNQPDIAVWNLAQLATALIQQAEDKEAVVEEATEIVHAMPELLERAWLEVFAAKIGIARP
GEGDKALVSELLTRMAREQADFTNTFRALGAPRARDQFTDPTAYDSWAEDWRQRLTQEATPEAVIRAANP
AFIPRNHRIEQMITAAVEGDYTLFERLNTVLARPYADQPDHIDLTRPPSASEIVPATFCGT
>gi|56697331|ref|YP_167697.1| drug/metabolite exporter family protein [Ruegeria pomeroyi DSS-3]
MCRTRPSCGRMEEKRPVDAAGAVALIGIAALLAFNQVVIKVTGGGFGPLFQAGLRSALGLVFVLIWMRLL
RKPIVFPRAALMGALITGLLFTVEFMALFAALDLTSVSRVSILFYSMPVWLALGGHFLLPGERLSGMRVL
GLMLAMGGVVLALLERDAAHVSLLGDALAVFAAMCWAAIALGVRLTPLGRVPAEMQLMSQLVISAPLLLV
LAPLTGETLRTPGLLHWAGLLFQAVGVVGLGFLIWFRLLAVYRANGVASFSFLSPVLAVILGWLLLGEQV
GPLVWLALGLVAAGIVLINRR
>gi|56697332|ref|YP_167698.1| endonuclease/exonuclease/phosphatase family protein [Ruegeria pomeroyi DSS-3]
MHSQTLRLASYNIQKCVGLDLRRQPRRILQVLDAMGARIAVLQEADKRLPPRPAALPHFVLEEAGWQVVD
LGGAGSLGWHGNAVIWKGAGITQLASAHHDLPGFEPRGAVRVEFDTPIGPLRVLGLHLGLLPASRRDQIV
HLAHDLERLPPMPTVWAGDFNEWSRQPVLDHLAPMLRFLPARPSFPAPRPLGALDRIAHSPELSAVAHGV
FAERPAPIASDHLPVWADLTRPV
>gi|56697333|ref|YP_167699.1| anhydro-N-acetylmuramic acid kinase [Ruegeria pomeroyi DSS-3]
MTALGAMSGTSLDGVDAAVVETDGLAIFGFGPVGYRAYSPEERAVLRAGLGRWAGPEVEAAGDLVTRAHA
QALAGFEGVDLVGFHGQTLAHEPRGRGTLQVGDGAALAAALRRPVVWDFRSDDVQLGGEGAPLAPFFHFA
CAKWIGATEPLCFLNLGGVGNLTYVDPSFERPEVPGALLAFDTGPANAPVNDLMQARLGLPMDEGGAVAR
GGTVETGALELFLAEPYFSRMPPKSLDRNDFAEMIGLVSELSDSDAVATLTGMCAAAVAQGMEHCPRPPA
RVLVTGGGRHNPVLMEMLQVSLDCAVEPVECVGLDGDMLEAQAFAYLAVRVARGLSTSCPGTTGVGALVG
GGMVSLPDEA
>gi|56697334|ref|YP_167700.1| tyrosyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
MTYHPKSDFIAVMMERGFLADCTDYQGLDEALMKGCQPGYIGFDATAKSLHVGSLIQIMMLRWLQKTGHK
PITLMGGGTTKVGDPSFRADERPLLTPAQIDDNIAGIRKVFAAYIDYDSGAENAALMLNNEEWLDDLNYL
DFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYDFMELNRRYGCILQMGGSDQWGNIVN
GIDLTRRVIDHEVYGLTSPLLTTSDGKKMGKSQDGAVWLNPDMRSPYEFWQFWRNTTDADVGRFLKLYTE
LPVGECDRLGALAGSEINAAKVILANEVTALCHGAEAAATAEATAREVFEKGGIGDDLPTLTLGAADLPA
SIVQLIVKTGLAKSGKEAKRLIAEDGARLNDAPLTDAGMMIEAGDLAAPIKLSAGKKRHALVQLG
>gi|56697335|ref|YP_167701.1| hypothetical protein SPO2485 [Ruegeria pomeroyi DSS-3]
MKQVYRQILPGARITRAAAFLVACLLSLLLVGLPWLVLLL
>gi|56698733|ref|YP_167702.1| hypothetical protein SPO2486 [Ruegeria pomeroyi DSS-3]
MFDAALPDTVPLQQSAEFAAALSLCGRRALRLEDGTLLLCRPIAGVPLLLASRARLVPDTLPALLARARL
HRRAILLNPDAPSAELARLGAVPLVTPAHVAELDLTGDLRAGLHQKWRNRLRHGEGQELIVTRQTLPQTP
DHWLFRAEAAQQRARGYRTWPTEVTLAYGRANPGAAKLFTARQGKTPVAALVVLRHGSGASYHIGHSTPA
GRALSAHNLLLWRAMTWLAAKGVRHLDLGPVDTETTPGLARFKLGTGARARPLGGTWAWWPPLGKTLRPL
ARLDHARMFQSWTDTPAPDY
>gi|56697336|ref|YP_167703.1| 3-hydroxyacyl-CoA dehydrogenase, type II [Ruegeria pomeroyi DSS-3]
MQLDTTAAVITGGASGLGEATARYFAEKGAQVTILDRDSARGETVADEIGGHFAQTDVTSEDSVAAAIAH
AMEKMGKITAAVNCAGIAYGIKTVGKEGAHPLDAFQRTIDINLVGSFNVARLAAVEMARNEPEPDGARGV
IINTASIAAFDGQKGQVAYSASKGGVVGMTLPMARDLASTGIRVMTIAPGIFLTPMLMGLPDEVRAGLAA
DVPNPARLGDPREYGRLAGFIVEMGYLNGEVIRLDGALRMR
>gi|56697337|ref|YP_167704.1| ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MARIPLLQMTGISLTFGGEPVFSDLDLVVQPGDRVALVGRNGSGKSTLMKVMAGLVEADAGEIVIPPGKS
VGYMEQDPTMSGFATLGDYAASALEPGELYKVERAGEGLKFDPARAIETASGGERRRAALAKLMAEAPEL
MLLDEPTNHLDIEAIGWLERELSATRAAFVLISHDRAFLRALTRATLWIDRGMVRRQERGFEDFEAWRDK
IWEDEDTARHKLNRLIKSESRWAVEGISARRKRNQGRVRALQALRAERAAQIKRQGTAAMSLDAGPKSGR
KVIEAKGLTKAFDGKPILRGLDLTVLRGDRVAFVGPNGVGKTTVLKMLLGQVDPDTGTVRLGTNLEVAVF
DQTRAQLDPEMSLWDSLTSDPEMRVSGKADQVMVRGQPKHVVAYLKDFLFDERQARAAVKSLSGGEKARL
LLARLMAKPSNVLVLDEPTNDLDVETLDLLQEILDDYDGTVLLVSHDRDFLDRVATTTVAMEGDGRAVVY
AGGWSDYRAQRGEDAPKEDVKSKPSAPKIKQEMKVKSGLTFSEKHRLEALPAEIARLEAEIAKLQELMAD
PELYTREPVKFQKATEALVQRQEKLSALEEEWLALEEKAEAG
>gi|56697339|ref|YP_167705.1| hypothetical protein SPO2489 [Ruegeria pomeroyi DSS-3]
MLGVGPLGLTCSVEGRVMPDAILLSKGRYRARLARGPEDVAAAQALRTLAFRTTTPDRDHFDALCDHVLV
EDMRQGDMLVCCFRMLTMEGGAEIGRSYSAQFYELTGLQSFEGRMVEMGRFCIHPDHHDADILRVAWGAM
TTFVDRTGVQMLFGCSSFAGTETADYLDAFAMLKHRHLAPKRWLPRVKAPDVFRFAARLRRKPDAKKAML
RMPPLLRTYLLMGGWVSDHAVVDRQMNTLHVFTGLEIGAIPPARKRLLRAVAG
>gi|56697338|ref|YP_167706.1| SmpA/OmlA family lipoprotein [Ruegeria pomeroyi DSS-3]
MSKTAGLLKPVFRIVAIGLTAGVLTACTAIYRNHGYVPTAEELAAIQVGVDTRDSVVEAVGTPSSSGLLN
ESGYYYVASRMRHYGARAPQVVSRELVAISFDQRGVVRNIERYGLEDGRVIPLERRVTSSSVEDKTFIRQ
LLGNLGSFNPANVIN
>gi|56697340|ref|YP_167707.1| hypothetical protein SPO2491 [Ruegeria pomeroyi DSS-3]
MASRAFYPDYRNLCSGSTDESSSMSDETVLRVADLPQNSVTSFDLRPAPAQLAEIAQQLGLDGLRKLRFS
GTLRAEGKRDWRLEADLGATVIQPCVVTLDPVTTRIDTPLTRLFLADWADPDEEEAEMATEDDEAEPLRD
TIDLNAVMCEALALNLPAYPRKEGVELGQAGFTEPGKQAMTDEETRPFAGLAALRETLKKDS
>gi|56698714|ref|YP_167708.1| 50S ribosomal protein L32 [Ruegeria pomeroyi DSS-3]
MAVQQNKVSKSRRNMRRAHDALVAANPNECGNCGELKRPHHVCAACGHYDDREVVAQADEIELDEDAA
>gi|56697341|ref|YP_167709.1| putative glycerol-3-phosphate acyltransferase PlsX [Ruegeria pomeroyi DSS-3]
MTAQPDQTGSASGQIIISVDAMGGDAGPSVVVAGIAKSAKKNPQVGFILHGPEDTLKKLVAKRRVLDGRV
VFRDCPDVVTMEDKPSQVVRNGKNTSMWSTLESVRNGEAAGAVSCGNTGALMALSMLRLRRLPGVTRPAI
AILFPSGNPQGFNVLLDAGADIRADARDLLQYALMGASYARNGMNLLRPRVGLLNVGTEEHKGKAELKEA
QALIAEYAERANYEFVGFVEGSDIPGKRCDVIVTDGFTGNVAIKTGEGTARMIGSLLREAFKYSPLSRLA
SLLAVTSLRRLSKRIDPRRVNGGVFLGLNGTVIKSHGSADDTGISAAVKLAFTLAQSGFAERLAARVASA
AALTQDEAAPTGAQAEKQESR
>gi|56697342|ref|YP_167710.1| 3-oxoacyl-(acyl-carrier-protein) synthase III [Ruegeria pomeroyi DSS-3]
MAGRAVVKGVGHYLPERVVPNAAFEKTLDTTDEWIRSRSGIERRHFAAEGETTSDLATRAAEAALADAGI
SAEQIDAIVLATSTADLTFPSAATMVQARLGMTNGYAFDVQAVCAGFVYALSNANALIVSGQAKRVLVIG
AETFSRIMDWTDRSTCVLFGDGAGALVLEYEEGEGTPQDRGILSVDLNSDGRYKDLLYVDGGVSTQTTGH
LRMQGNQVFRHAVEKLAQTAETALDKAGLSSADVDWIVPHQANIRIIQGTAKKMGLPMDKVVVTVQDHGN
TSAASIPLALSVGKARGQIKTGDLVVTEAIGGGLAWGAVVLRW
>gi|56697343|ref|YP_167711.1| integration host factor subunit alpha [Ruegeria pomeroyi DSS-3]
MSDKTLTRMDLSEAVFREVGLSRNESAQLVESMLNHMSDALVRGEQVKISSFGTFSVRDKSARVGRNPKT
GEEVPIQPRRVLTFRPSHLMKERVAAGNRK
>gi|56697344|ref|YP_167712.1| MerR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MSKSPDAFRTISEVAEWLGVQAHVLRFWESKFNQVKPVKRAGGRRYYRPADMQLLGGIKKLLHDDGMTIK
GVQKLLREQGVAHVAEQSQDLEDSATPAPESGGNVVRFKAQPADIDEALQFDMDLGEPVPTEVLQKIVSD
SAPALADEDDDDSEGDVEILSAPRQETAETPEPAQADMAEEEEVQAPRPLAIEVADIPADDVIEAEPGPL
SALADIHVLPVAAQSGIRPLAAELQAWLDRQAG
>gi|56697345|ref|YP_167713.1| 2'-deoxycytidine 5'-triphosphate deaminase [Ruegeria pomeroyi DSS-3]
MTGVCPNQQIEAMIAGGEIRAEPPVLPEQIQPASLDLRLGTVAYRVRASFLAGAGHSVADRLAEFEMHRI
DISQGAVLEKGCVYLVPLMESLALPAQINAVANAKSSTGRLDLLTRTITDGGTEFDRIPAGYTGPLYAEI
CPRSFSVLVRPGMRLNQIRFRRGQAVLDDTALRALHAEMPLVDGPAVIQDGLGFSVDLRLPGSDLVGYRA
KPHTGVIDLDRIGAYDPAEYWEEVRSRDGRIILDPGAFYILVSREAVHIPPLYAAEMAPYLAMVGEFRVH
YAGFFDPGFGHAQAGGAGSRGVLEVRCHEAPFVLEHGQIVGRLVYEKMAEQPTQLYGAGIASNYQGQGLK
LSKHFKTPA
>gi|56697346|ref|YP_167714.1| hypothetical protein SPO2499 [Ruegeria pomeroyi DSS-3]
MMLCLCTGSNEEKLMNVNQLIDMVIRTVIRRAVNGGVNAGFDAVSNMGRKSRKAPPPEQHEPDPERERIR
EMRQARRAARNEQEL
>gi|56697347|ref|YP_167715.1| segregation and condensation protein B [Ruegeria pomeroyi DSS-3]
MNDAPEDRTESLFEAPPMAEQERMVEAVLFASPDPVGVGDLAARMPHGSDPAQALEMLRKRYEGRGVRVV
QVGEGWAIRTAPDLGFLMQKETVETRKLSRAAIETLAIIAYHQPVTRAEIEEIRGVSVSRGTIDQLLEME
WIRLGRRRMTPGRPVTFVVTPHFLDHFGLESARDLPGLKELRAAGLLENRPPPGSLPIGEARDEGDEDTG
QPELFEED
>gi|56697348|ref|YP_167716.1| segregation and condensation protein A [Ruegeria pomeroyi DSS-3]
MTSPPPRRNYLASWAGRCMTDNLFSEDQTTVAERLAAEALIVDVDGFEGPLDVLLTLSRTQKVDLRKISV
LELARQYLAFVERAKALRIELAADYLVMAAWLAFLKSRLLLPPDPDEDGPSGEELAAHLAFQLERLQAMR
DSAARLMGRDQLGRDFFRRGKGEDIARIRTVTYSASLLDLMQAYARIRTRDEFRPFVMDRDKVYTMEQAL
ERMRGLIGFAGSWTDMASYLPEGWGKDPVRRRSATAATFAASLQLVKEGHLEIRQSELFAPIHLRKKDID
T
>gi|56697349|ref|YP_167717.1| beta-N-acetylhexosaminidase, putative [Ruegeria pomeroyi DSS-3]
MSFGATILDAEGLRLSTDEKALFREADPFGFILFARNVDSADQVRALCAEMREAVGRDCVITVDQEGGRV
QRLRPPLARNWLPPLDHVARAGTGAERAMYLRARLIAHELRAVGIDSNCAPMLDLARDETHPFLRNRCYG
SDPETVARLGRAVAQGHLDGGVLPVVKHMPGHGRATLDSHHDLPHVALEAEALDGTDFAPFRALNDMPMG
MTAHLVYDRIDPRPATISPVMMALIRERIGFQGLIMTDDISMKALAGSIADKTARALAAGCDVALVCNQT
LAERAAAAGAAGRMSAQAQARAERALALRQPPGELDIPAAEAELSRVMGGQVYDG
>gi|56697350|ref|YP_167718.1| hypothetical protein SPO2503 [Ruegeria pomeroyi DSS-3]
MLFLVSLRRRRCGNSKHHRPNRRPEAGTRKPSRDQRVARQGSEADMASFDYAGHVNPNQVRYSYQMPGMG
LDVEDEIPDEDTGEDYGHAPGRPGLARAMSIAGAVGSLVLVVGVGIWGYKLVMRDVSGVPVVRAVEGPMR
IQPDNPGGTPADHQGLSVNTVAAAGSAAPPADRLVLAPRPVSLSEDDLPMEDLRAIPASLEVDAADPEAV
EAFRNGDIDRLVAELTEGAAPLAERETALLDEGTSRTASIELPEPLEAIDPADLLAENPQLALVDEPGVA
RSLRPQTRPQRSVPTATEARDAMNAAVTAAVGAATAVDLDPASLPVGTRLAQLGAYDSPEIARAEWDRLN
GRFGEYLDGKQRVIQEASSGGRTFYRLRAAGFGDLAEARHFCSVLVAERADCIPVTTR
>gi|56697351|ref|YP_167719.1| arginyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
MNLFTEMRGLVLEALEQMQAEGALPQGLDFANVAVEPPRDAAHGDMATNAAMVLAKPAGQKPRDIAETLA
ARLAADARVAKAEVAGPGFLNLTLAAPVWQRVVGTVLLDGTAYGRSDMGQGKKVNVEYVSANPTGPLHVG
HTRGAVFGDALASLLDYAGYQVTREYYINDGGAQVDVLARSVYLRYLEAHGQAVEFVDGTYPGEYLVEVG
QALKDKVGDAYVGQPEEVWLEAIRDFATDAMMELIRADLAQLGVKMDVFYSEKSLYGTGRIEAAIDSLRA
KGLIYRGTLEPPKGKLPEDWEPREQTLFKSTEHGDDVDRPIMKSDGAWTYFAPDIAYHYDKVSRGFDALI
DVFGADHGGYVKRMKAAVSALSDGRVPLDIKLCQLVKLWKNGEPFKMSKRAGNFVTLRDVVDQVGADVTR
FVMLTRKNDAPLDFDFDKVLEQSRENPVFYVQYAHARVSSVLRRAAEAGIDTSDTALRAADLGLLGHEAE
LAVMRKLAEWPRLVEIAARTNEPHRIAFYLYELAGDFHALWNRGNDVSELRFIQDGDEGTSQAKIALARS
VAVVISAGLAILGVTPAEEMR
>gi|56697352|ref|YP_167720.1| deoxyguanosinetriphosphate triphosphohydrolase, putative [Ruegeria pomeroyi DSS-3]
MKRAGFASDPGRARGRLVPEEESGFRSCFQRDRDRIIHASAFRRLKHKTQVFVEHEGDSYRTRLTHSIEV
AQVARTIAGALGLNPELTEAVALAHDLGHTPFGHTGEDALHALMAPYGGFDHNAQAIRIVTRLERHYAAF
DGLNLTWETLEAIAKHNGPVTGALPWALAECNATFDLELDTHASAEAQVAALSDDIAYNNHDLHDGLRAG
LFSDDEIAELPIVGDCYAEVDRTYPDTDAYRRRHEALRRVFGVMVADVIDTSRAALAGSGAESVADIRHL
GRPVIRFSDALWSDLRQIRAFLFTRMYRAPSVMVVREQVARVVEELFPIYLGDPRQMPRHWHGEIDAAPD
ETALARIVSDYVSGMTDRFALQDHARLTGRDPIRH
>gi|56697353|ref|YP_167721.1| Iron-sulfur cluster assembly family protein [Ruegeria pomeroyi DSS-3]
MRLPPKVTDRAFARLAEIGAADQGQALRVAVEGGGCSGFQYEIALDAPKSDDLVLEGQGQRVVVDAVSLP
FLENAVIDFSEELIGARFVIDNPNATASCGCGTSFSI
>gi|56697354|ref|YP_167722.1| hypothetical protein SPO2507 [Ruegeria pomeroyi DSS-3]
MRAALTGGGLVLAYTAVISSADAITKLIAQGYAAPQLYAISGLIVAAISLAAARRNRARALKTVCPRAMA
LRALATVVASLCFFHTFRLLPFADVFVFIGLMPIMAALMSGLMLDEHARPAAWAALVAGFVGVLCLMPGG
IGAIGAGHLWALGGVVTGTFSLILSRYIGRYESNALAQVFYPNLALGLSMAAALPFVWVPMPMLDLAWVG
AYAALLFLARWLLVIALRLLAAYVVTPLLNLQFVWMVALGALAFGEWPAPMTWLGAAIVMVSGLYLIWDQ
MTPTTREQEELSLRTDP
>gi|56697355|ref|YP_167723.1| hypothetical protein SPO2508 [Ruegeria pomeroyi DSS-3]
MKKSFSNTGSPATVRGSSTPTLGDRPMTAMLKINQIQGEIKDGASMMDGDVTGLFSSGSAPMASASALMG
EGAQMFSTSCEASGRDTTTGEGVQMFSTSCEASGRDTTTGEGVQMFSTSCEASGRDTTTGEGVQMFSTSC
QKTGAVAVKLGEGTQMFSSGS
>gi|56697356|ref|YP_167724.1| exodeoxyribonuclease III [Ruegeria pomeroyi DSS-3]
MKIATFNINGIKARAEALPAWLDSAQPDVALLQEIKSVDESFPREMFEERGYNVETHGQKGFNGVAILSK
LPLEDVSRGLPGDDSDEQARWIEATVVGKQALRLCGLYLPNGNPVELTESGDPVPGGKYDYKLRWMERLQ
ARATELMAAEEPALMAGDYNIIPQAEDAKRPEAWREDALFRPESRAAFRRILNLGFTEAFRARVQGPGHY
SFWDYQAGAWNRNDGIRIDHFLLTPQAADLMRDCGIDKEVRGRDKPSDHVPVWVELDI
>gi|56697357|ref|YP_167725.1| salicylate hydroxylase [Ruegeria pomeroyi DSS-3]
MFGTRIIVVGAGIGGLAAALALKARGADVTVLEQADAIAEVGAGIQVSPNGAAVLGALGLGPAFEAISVR
GRAVVLSDYRRPGEVLRLDLMRHAGDQRYAFVHRADLIDLLAGAVRRAGVNVRLLQKVDRVDPGSPPVLH
MCNGAHLTADLVVGADGLHSRARAALNGAAKPFFTGQIAWRATVPNTVGLPDEARVFMGPGRHLVCYPLR
GGSLVNLVAVQERADWTAESWSQSDDPANLRAAFADFTGLPAALLAQVRAPGLWGLFRHPVAETWHRGRV
TLVGDAAHPTLPFMAQGANMALEDAWVLADELGKAPGIELGLAAYQDRRQARARRVIAAANGNAWKYHLR
APLRGPAHLALSLGGRLAPARMVRQFDWLYRHDVTRGA
>gi|56697358|ref|YP_167726.1| dnaK suppressor protein, putative [Ruegeria pomeroyi DSS-3]
MSEHITETDVVGQTEGAQMKPESFLPEDYSPAEDEPFMNDRQLEYFRRKLINWKHELMAGSRDTIEGLQD
GTRNIPDVADRASEETDRALELRTRDRQRKLVAKIDAALRRIDEGEYGYCQVTGDPISLKRLDARPIATM
TLEAQERHERREKVHRDD
>gi|56697359|ref|YP_167727.1| AAA family ATPase [Ruegeria pomeroyi DSS-3]
MTARFQGTAEYVATDDLTIAVNAAVTLERPLLVKGEPGTGKTELARQVAGALGLRMIEWNVKSTTRAQQG
LYEYDAVSRLRDSQLGEERVHDVGNYIKKGKLWQAFDSDEKVVLLIDEIDKADIEFPNDLLQELDKMEFH
VYETGQTVRARQRPIVIITSNNEKELPDAFLRRCFFHYIRFPDEATMRRIVEVHHPGIKESLLTAALTQF
YEIRETQGLKKKPSTSEVIDWLKLLLAEDLSAEDLRRDGANALPKLHGALLKNEQDVHLFERLAFMARGK
R
>gi|56697360|ref|YP_167728.1| hypothetical protein SPO2513 [Ruegeria pomeroyi DSS-3]
MTGLVSLSSSNKMTVTSALSRTISRPLVRALALVSGLGLAACDTVPLEDTPTRAQTPGLSLEPMKSFGAT
RVQPPQRSNGNIAADFLALHFQLESGRDLPVFTRFETPITVRVTGSPPASLQPDLTRLLGRLRSEAGIDI
RQVSEAGASITIEAVSREEIGRALPHAACFVVPNVSSLAEFRRDRRKDKTNWANLRKRERLGIFVPYDSS
PQELRDCLHEELAQAIGPLNDLYSLPDSVFNDDNIHTILTGFDMLVLRATYAPELRSGMSRDQVTAVLPD
LLGRLNPRGVTVAARPVVTTPRAWIDQVQAALGPGVAFQTRLDAANRAAQMAQSWGWTDQRRAFGHYMLG
RMLQTADPDLAQRHFLTAMQVLQSTPGTRLHQAYVTTQTAAFAISRGDGAGALAQLRPMRDVAAQAENAA
LLATLMMLEAEALTLLGKTDAARDLRLDSVGWARYGFGSDWAVRAKMQEIASLNPRNALGG
>gi|56697361|ref|YP_167729.1| hypothetical protein SPO2514 [Ruegeria pomeroyi DSS-3]
MIVIAAALFGALLGGLTAKRRNGTTADIAQYAAGYAIAFALLGMIATLVIHRLMV
>gi|56697362|ref|YP_167730.1| hypothetical protein SPO2515 [Ruegeria pomeroyi DSS-3]
MFLPFFENLRKAGVPVSLREYLTFLEGMKKGLATYDVEAFYYLARVSMVKDERNIDKFDRAFAASFKGLE
DITFEQVMEAVDIPADWLEKMAEKHLSPEEKAEIEALGGFDKLMETLRERLKEQEGRHQGGNKWIGTAGT
SPFGAYGYNPEGVRIGQKESRHQRAVKVWDKREFKNLDDTVELGTRNIKVALKRLRRWAREGAAMELDLD
GTIRATAEHGYLDVKERPERHNAVKVVLFLDVGGSMDPHVKVVEELFSAARSEFKHLEYYYFHNCLYEGV
WRDNRRRWDAQIPTHEVLRTYGPDYKCIFVGDASMSPYEIAYPGGANEHWNQEAGQVWLARAREQWASNL
WINPVPEKYWDYTHSIGMIREIFDDRMVPMTLSGLEQGMRVLTR
>gi|56697363|ref|YP_167731.1| hypothetical protein SPO2516 [Ruegeria pomeroyi DSS-3]
MMTRLTLLIAFALPLMGCSEPEPEPVQILEAPAFDKLGNPVCPEGYSLSATETGEPVCVGVAF
>gi|56697364|ref|YP_167732.1| M48 family peptidase [Ruegeria pomeroyi DSS-3]
MLRVTPILLAVLYAFAMYHFSAWRTRRELDARSTELADPALKRLTDRLAAALGVARVPVHIYEIDPVNGL
AAPDGRIFITRGFYRKYQSGEVTGEELTSVIAHELGHVALGHSRRRMIDFSGQNAMRTALAMLLGRFIPF
FGVWIANMLTTLLAARLSRADEYEADAYAAALLTKAGIGVAPQKALFHKLDALTEQRAGVAPAWLLSHPK
TAERIAALDRLEARWQAH
>gi|56697365|ref|YP_167733.1| luciferase family protein [Ruegeria pomeroyi DSS-3]
MTPDPTRMLYSLLDLAPVPEGSDIPEALANSADLAAHAEALGYHRYWLAEHHNMPGIASAATAVLIGHIA
SRTSTMRIGAGGIMLPNHAPYMVAEAFGTLASLYGDRIDLGLGRAPGTDMATARALRRGLSQQDSFPQDV
IELIGFLGPEDPEARVRAFPGQNTHVPVWILGSSLYGAQLAAQLGLPYAFASHFAPQALEEALQVYRRSF
RPSVYLGQPHAMMAINVFAAETDAEGVRLRTTMQQAFARLRLGRPGKLPAPVDDIAAHLDRATLAGVNAA
LSVSAVGSPETVRADLTHVIDRYQPDEVILTGQIHDHTARKRSFEIAAGILRSL
>gi|56697366|ref|YP_167734.1| hypothetical protein SPO2519 [Ruegeria pomeroyi DSS-3]
MKAVLDTCVIYPTVMREMLLGAARLGHFTPLWSARILEEWARAAVKLGPAGEAQARAEIALTRAAWPRAE
VPPAPGVEARLWLPDPADIHVLATAIAGSADVIVTLNRADFPRNILAEEGLERIDPDAFLLQFFNDDPAG
FARMAEKVLDEANRLSGETWTLRSLMKKARLPRLGKALEHHRSE
>gi|56697367|ref|YP_167735.1| hypothetical protein SPO2520 [Ruegeria pomeroyi DSS-3]
MTAPSDVFDRPRIRLKPKANARAIRHGAPWVFDNEVVTDRRTRKIAPGTVAVLEDDNRAPLGLVAVNPGS
RILARMLDRDPEAELNAAWFEARLTRALALRERLFDAPFYRLVHAEADGFPGVIIDRFGEACVIQPNAAW
AEAHLELLSAALIKVTGVSTVLKNASGRTRALEGLDDQNAVLAGAAPTAPVPVLMNGATYMADLTGGQKT
GLFYDQRPNHAFAARLAGQGTRVLDVFSHVGGFALAMLAGGAGSALAVDGSAPALALAEQGALASGLAGR
FETRQGDAFDVLTALAEEGETFDVVICDPPAFAPSKQALDAGLRAYERVARLAAALVRPGGYLGLCSCSH
AADLSRFREASVRGIGRAGRSAQLIHTGFAGPDHPQLPQLAESGYLKAVFFRL
>gi|56697368|ref|YP_167736.1| putative lipoprotein [Ruegeria pomeroyi DSS-3]
MKTMRMILLAGLGLSVAACTAVDVPTRNAPYEQLPNTSVAAPAGYDLLQPEYRVQPAAAVGQVMIPQTDS
VARAATQDPGNPALAAGQAPVSINSVTVLVPRSLKVSERNSYLPRGDIVWREDPIGDRHAQVQKIVQDAM
VRGVSPLSGPVKADLEIVVKRFHALTEKARYTTGGVHAITFDIVLKDPATGAQLMPPREVRADLEAFGGQ
QAINAEARGQTQKVRITGHLAEVIRQELTNPEGYKNASLGIIQVMNRL
>gi|56697369|ref|YP_167737.1| hypothetical protein SPO2522 [Ruegeria pomeroyi DSS-3]
MPKTGDPHDPKGLIYEAYRIEGITAPECRTIFLDWALSLPVGSDQRASLADLHGRYGAEAPDHPMTAVMQ
DGLAAEQAPRRRGGWRSRPRN
>gi|56697370|ref|YP_167738.1| glutamate-ammonia ligase adenylyltransferase [Ruegeria pomeroyi DSS-3]
MSTRLAITRLPRAYDPDLGAEARALLPDLGGDLADLVAGTGGTSPYLMGLMRAEAAWLAPALNDADAAVA
AELAAARALPPDQLKPGLRRAKRRLALLTALADLAGAWPLEKVTALLTDFGALAADLAAKAEIAALIRRG
KLPGQTEADVETAAGMVILAMGKMGAHELNYSSDIDLIVLFDETRYDPDDFFEARQGMVRATRNFCATLS
DKTADGYVFRTDLRLRPDPAVTPVCLAMEAAEHYYESLGRTWERAAYIKARPCAGDLAAGARFLETLRPF
VWRRHLDFAAIQDAHDMRLRIRENKGTGGALTIAGHDMKLGRGGIREIEFFTQTRQLIAGGRDRDLRLRG
TVEGLAALAAKGWVPSEVAEALTRHYRAHREVEHRIQMVHDAQTHRIPQTEEGIARVACLMGIDATELRA
DLTRRLTEVHGLTEDFFAPDTGAAPAPAMPAEVVFDDNVLSRWPTYPALRSQRGRRIFERLKPELLARLA
RTAKPDEALLALDGFLAGLPAGVQLFSLFEANPQLIDLLVDIVGTSHTLATFLSRNASVFDAVIGGSFFD
DWPGGAALRADLAERLAAEDDYETRLDMARRWTKEWHFRIGVHHLRGLIDGARAGAQYAELAEAVISALF
PVVEAQFARKHGNPPGRGATVLGMGSLGAGRINAQSDLDLIVIYDPEDAEGSDGPRPLATRPYYARLTQA
LITALTAPMSQGRLYEVDMRLRPSGTQGPVATSWTSFTEYQLNEAWVWEHLALTRARPVAGSVALGEDIE
RFRQELLNRPADRDKVLREVGEMRARLAAAKQPAGVWDAKTGPGRMLDIELVAQTGALLSGSAARDVAQG
LQGAVAAGWLNVADAQSLTRAYDLCWSVQTAARLLSGEMIDAERIGEGGAAFLCRSTGFQDMASLQAALE
TTYAEAAALIGAAVGGTEDAEDG
>gi|56697371|ref|YP_167739.1| YbaK/prolyl-tRNA synthetase domain-containing protein [Ruegeria pomeroyi DSS-3]
MSKSLKRVRAALEAAEITTEIRETGNARTAEDAAAAVGCALNQIVKSIIFQARDGDALALFLTAGGNQVD
PDAATALFGKPLARADADTVRRKTGFAIGGVAPVGHLSPPRCFLDPALMGFPLVWAAAGTPRHVFAIAPD
RLHSLTGARIADFVKVG
>gi|56697372|ref|YP_167740.1| hypothetical protein SPO2525 [Ruegeria pomeroyi DSS-3]
MPTSGANRSSHDRLQRENRMQSGWWLLPGVLLGGGCWAVLLSQALTLI
>gi|56697373|ref|YP_167741.1| hypothetical protein SPO2526 [Ruegeria pomeroyi DSS-3]
MLCIPAGWEFGHDSHWFARIPERMRAVVSNGIVVFSRFAGAVGGDTSDHFVGQYLAPAQEERRLGRQCNP
>gi|56697374|ref|YP_167742.1| 6-aminohexanoate-cyclic-dimer hydrolase [Ruegeria pomeroyi DSS-3]
MKLSEYASYDATGLADLVARKEVSADELTDAARRGIAAVNPQLNFMVDTIAPPIAGDGSGAFAGVPFLIK
DIMMTAAGVPQGMGTRLLDNDVYVAPHDGELMRRFKAAGLNTLGRTTTPEFGFNATTESVATGPSRNPWD
PSRTTGGSSGGAAAAVAAGVVPMAHANDGGGSIRIPAACCGVVGLKPSRGRTPLGPDAQLAILGLGIEFA
VTRTTRDAAALLDLVAGPEAGSFIPLANPVTSYSDSIKTPMQGLRVAIAPTGFQGAAPTDAGMSAEVVRV
GKLLADLGHTVEEIDHVPLEHEQFHAANYRFWMATLAAASKTLTTAFGIPASTDVYETCTLKGIQDGQAM
SAVDIMEAVQIMGMTGHQMGAFFAGYDAVILPPFAAPPIPLGVLDQNHPGWSARRFYDELFSRFNATAPF
NVTGQPAITVPTGLVEGLPAGVQIATSLAREDILLNLSAQLEDATDWPARRPAVSVANL
>gi|56697375|ref|YP_167743.1| AMP-binding domain protein [Ruegeria pomeroyi DSS-3]
MAQQNVNAGLAAQDGLSHVQGASQPDLSNATIPQLLHTTVARGGANDALIFAGARLSYDAFAQAVDDLAC
GFLALGLQKGDRLGIWSPNRVEWVLTQFATARIGVILVNINPAYRLSELEYALNKVGCKALVLAPAFKAS
DYVEMIRTLAPELASCDKGGLRTARLPDLRHVIVMGENAGQCGEWAFGEIARMGGAEHRARLPDIDKTLN
PDDPINIQFTSGTTGQPKGATLTHRNIVNNARFVTDRINLSERDRLAIPVPLYHCFGMVMGVLGAVSKGA
AMVFPGEAFDPAQTLDTVEAERCTALYGVPTMFVAMLQELATTSRDLSSLRTGIMAGSPCPVDVMKQVND
RMHMGEVTICYGMTETSPVSFQSFVDDSTEKRCETVGRIHPHLEVKIVDDTGNTVPVGVQGELCTRGYSV
MQGYWDDPERTAEAIRDGWMHTGDLAVLDADGFCTITGRVKDMIIRGGENIYPREIEEFLFGHPDIKEVQ
VFGIPDARMGEEVCAWVVAKPGCEISAEDVRTYCRGQIAHFKVPRHVRIVTELPMTITGKPQKFIMRDRM
VEMLGHAGASD
>gi|56697376|ref|YP_167744.1| hypothetical protein SPO2529 [Ruegeria pomeroyi DSS-3]
MTTADFIIENGRVLTMNAAAPRAEAVALRGGAILAVGGRDEIAELAGPDTRRFDAQGNTVMPGMVEAHLH
LFLGAAGLRMLHLDTVRGAAALRERLHPYAAANPDAALLICKAADYNLFGDGIATTRQLLDDILSDRPFI
LIAGDHHTAWANTAALERAGILQGRDLPTGNEIVMGPDGTATGELREQAAIDPVLSLRSSGGRENLGLMG
LEPSVELTAAQRDDDLRVIKEGLKYCASFGFTSLHNMDGNLYQLALLRELEDRGELICRTEVPFHLTPEK
PLSSLDEASWMHETYRSDRLRSGRIKMFMDGVIDSGTAFLVGDYADRTGWCGEALHSAEAFTAAAVEADR
RGLQISVHAIGDAAVRRVLDGYEAARRANGARDSRHRIEHIELLHPDDAHRLRELGVVASMQPPHPPGAM
DFPLEPWRTKAGQGRWPQAFPVRALLSDGVPLAFSSDWPVSDINPMRGVRAAMTRPRWDDDCPDNRLSLT
EALHGYTAGGAYAGFDEHRLGRIAPGMQADIVVMDRDLEALASEEIDTARAALTLCGGEITWEA
>gi|56697377|ref|YP_167745.1| branched-chain amino acid ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MNQSHSLKRHLLVSVLIVAGFAALPLVMTQRYLLGEVILFFLWAMVAMNWNLLMGHAGVFSLAQMLFFAT
GAYSVAMGTSYLGVSIWAALPLAAVVSAILAFFIGLACLRLTGAYVALLTYAIVGMVHVLIITETECFTM
VRNSCQQMFGGAAGFSQFEDFGFRKLLRGNWILGNYYVALLAFAVTILGIVVIIHGRLGLAFRAIRDNVG
YASSRGIDRRKYQIAAFAISAFLTGLAGAIYAGHFRAAGPSLFDFSTLLFVLSMVVVGGVGSTWGPIIGA
GTMMLIIEFSKGMGDARDLILGVALIVFVVVMPKGLAGSVRQFRQMLGRKASKNEEGSTV
>gi|56697378|ref|YP_167746.1| branched-chain amino acid ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MDVLIQIFFTGVTLGAMYALASVGLSLIFGTLGMFNMAHGLFMTLGAYVAYSAANAFQLPLVLGFVAAMA
AGAVIGVLTHLLIVRFMLGSPDFGMNVMVATAGLGIVLQDIVLKIYGGYPYPQVVRVEGIAQLGGVSITL
QALTNVAVALALILGTAWLLMKTRFGRAIRATAMNREAAMLMGVKADTVFLQVMALAGMLAGVAGLMIST
QATLSPQMGGDPLLKAFVICVVAGLGNVWGAGVCAFGLALLEAAIGYYFGVRFGFPTMLMLVILLLIWRP
QGLFGRERVVRL
>gi|56697379|ref|YP_167747.1| branched-chain amino acid ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MTQLLSCENLVSGYLNRPVLHGVSIEVPQQGVLALIGPNGHGKTTLLRTLSGFLPLRSGKITFDGQDAGR
MAVNKRVEAGLIHVPQGDQLFTEMTVEDNLLMGAYLASDKVEIAQRLADVYQLFPKLKDRRNQLASGLSG
GERRMVGIGRGLMADARLIMLDEPSLGLAPLVIEQIYAALDQLRARGKAFLVVEENPSRLMHFADRLCLM
DAGHVVWQGSAAEARDSGDILKTYLGGH
>gi|56697380|ref|YP_167748.1| branched-chain amino acid ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MAEDAHGFLELRGVTKRYGALAAVDGVDFTVDRGEVIGIGGPNGAGKTTFFDLISGLTRTTEGTIRFRDQ
DITGLAPHRLCRLGMARTFQLNSGFDNMTVFENLLAARAFGRRSAGGWLLTARADKQATQVLLDEIGLAD
IASDPVAGIPILARKKLMIATALIGEPDILLLDEPVGGLTPPEIDELIDLMLGLKSRGMTLVFIEHVMRF
LTAVADRAVMMHQGRIIYDGTPGGLANDKTVAEVYLGSAGLGGMA
>gi|56697381|ref|YP_167749.1| branched-chain amino acid ABC transporter, periplasmic branched-chain amino acid-binding protein, putative [Ruegeria pomeroyi DSS-3]
MTKELQHTQTRRGFLKSAGMATGSAAMLAGLNSAAQAQSSDPVVIGCPAPLTGIVAADGIEFQRGIQMAA
DEINAVGGILGRPIELVFADTQSKGVDVVIQSAQRLIDRDNASALIAGYNLENGTALHDVAADAGVIAMH
ANTVAVHDEMVKSDPDRYWGTFQYDPPETLYGGGFLKFLKDIEDNGEFSRPNNKIAIITGPGIYSVNIAN
AIRDGAGEYGYDVSLFETVAIPVSDWGPTLAKLRADPPAVIVVTHFYPQDQALFMNQFMTDPTNSLVYLQ
YGASLAAFRDIAGDNSVGVTYATVLGTLQDEMGDAFAKAYKERYGDLSSTASGCQTYSALYAYSIAAALA
GGPGAPYDDVQNKAVADRLRSLIFRGPVGTMRFHADTQSAWSYPTETNDPSLGMPHIFSQIFDKAEDGVL
IAPAPYKKAGFKMPPWMKG
>gi|56697382|ref|YP_167750.1| histone deacetylase/AcuC/AphA family protein [Ruegeria pomeroyi DSS-3]
MFHENTTCSRRTALVASELYYWHDTQNWCGSMVPSLTVQPAEHFENPETKRRLQNLVQATGLWEHLSHLR
PKRAADEVIRMVHPQSHIDHLASVCERGGGDAGELTPAGPASLEIARLAVGGVIVAMDAVMTGAAENAYV
LCRPPGHHALPDLAMGFCLLANAALGIRHVQKTYGLTRIAVVDWDVHHGNGTEAVFLDDPGVLTISLHQD
NLFPLDSGGIGVKGAGNSNINVPLPPGSGSGAYREAFEQIVIPALDAFAPELIVLPCGYDASAVDPLGVC
MLSSEDFRWMTRQVMTLADKHCQGRIVVTHEGGYSPVYVPYCGLAVLEELSGASDTLPDPYADFIANYGG
QALSNDQAAAIKRAKDAHFSS
>gi|56697383|ref|YP_167751.1| LuxR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MCTARSIDDFASVVVPFCRDVFAVQSVLAIRFHPSGPPEPLFKWVLENHLEALFDRDYTRFGYLLDPFYK
LAVETENWVACPLREIAPDRFETSEYFSNYFGPMGLVDDMGFVARVDDDTSVNMSIGRHAGKRRFRASEI
ARFRSLSTVLVPSLLSVLGKPTKRNPGVPATLEHRFLTISQNGENEISDREAEVATLIVQGHSSRAIGYK
LGISSNTVKVHRRNLYKKLNISSQSELFGLLTQNA
>gi|56697384|ref|YP_167752.1| hypothetical protein SPO2537 [Ruegeria pomeroyi DSS-3]
MAGDEFTRMVLGKDATNAERVISNGVIAPGAFNPDHYHK
>gi|56697385|ref|YP_167753.1| acyl-CoA dehydrogenase famiy protein [Ruegeria pomeroyi DSS-3]
MDFAPSAKAKEFHERLAAFMDAHVYPAEAVYHEQHGAAPSRWHVPPIIEELKARARSAGLWNLFLPDAEF
GAGLSVLDYAPLAELTGRSHIAPEVFNCNAPDSGNMETLFLYGTEEQKSRWLRPLLDGEIRSAFLMTEPD
VASSDATNIECNIRREGDEYVINGRKWWSSGAGDPRCKIFIVMGKTDPEASVHSQQSMVLVPADTPGVTV
ERHLPVFGYDDAPHGHMEVSLKDVRVPVSNVLLGEGRGFEIAQGRLGPGRIHHCMRSIGAAERALELMTE
RLLTRNAFGKAIGMHSVWEERVANARLEIEMTRLICLKAAWMMGAVGNKAAKDEIAMIKIAAPNMAARVI
DDAIQAFGGAGVSEDTPLAWMYAAQRALRLADGPDEVHRRAVARSEFKRAAARLGVDIRTVAS
>gi|56697386|ref|YP_167754.1| AMP-binding enzyme [Ruegeria pomeroyi DSS-3]
MTPPRSLLHALKPFLEAGADKEALVFGAHRISFGDMAGHAAALAEVLRSKGVQKGDRVAALFPPRPEAIL
SLLACWLIGATWMGINPRYQRREQAQILADAGVKVLMSMTRIGKRDLEDDLASHETDLGFSVLRFAPAFA
PAALPEKLPYDEVLRRWREATETLEPDSPSVVIYTSGSTGKPKGALITHAGLAFRSHTLHIDRFNLPAPT
QLIDLPVNHIGALASGIGVAMASGGKMILSEQFDPGVTLRTAFAEKLAIISGVPAMLARLVEHPDFATSD
LSSVKAISWGAGPINEAVLRKLLNATDALFSQQYGMTESNGPIVFTPPTRDVEVLLNTTGKPDPRLELRI
ADESGQPLPDGEEGEVQIRHPHPFAGYLGNAEASAAAFTADGFLHTGDLAMVREDGYLVFCGRSKEMYKS
GGFNVYPREIEIALEAHPAIRAAAVLGVDDEQWGQVGHAFVELASPLTSDDITGWCKARLADFKVPKRVS
VIDAMPRTPVDKVDRMQLAELAARG
>gi|56697387|ref|YP_167755.1| carbamoyl-phosphate synthase, putative [Ruegeria pomeroyi DSS-3]
MKRLLIANRGEIACRIIRAARSLGIETVAVYSEADAGALHVEMADQAVSLGPPPAAQSYLRQDALIEAAR
AKGAGAVHPGYGFLSESASFARAVVNSGLTWIGPAPETIADMGDKGRARALAIKAGVPVLPGSDSFAEGA
LDGVEEAGATVGFPLLVKATAGGGGIGMQRVDDPAKLRKIAERTQSAAARSFGDGSVFLERFIARARHIE
IQVFGFGDGRAVHLHERDCSLQRRFQKVVEESPAPGLDRAIVARMGEVACALASAVNYSGAGTVEFVMDA
DTGEFFFLEMNTRIQVEHPVSEMVTGTDLVAAQLRLAAGDDIHDDLADRAPSGHAVECRLYAENPAKKFL
PSPGTLERFSLPDGMDGVRVDTGVREGDTITPFYDPMIAKIIAWGESRDEALERINAALRATHVEGLATN
RDFLIAITSNPTFRSGEVWTGFIDTHLDALLSAQSG
>gi|56697388|ref|YP_167756.1| propionyl-CoA carboxylase, putative [Ruegeria pomeroyi DSS-3]
MSWQKEVDEINRRREIAKELGGAEAVKRQHDAGRLTVRERIDMLVDEGSFRELGALTGKATYDKDHNLVD
VTPANAVIGRGTIDGRKVSIDGDDWTIRGGSSEATVSEKWIYAENYAEAMRMPLIRLVESAGGSVKILDQ
NAATKLPAYPTWNLARMMGTIPIVGLALGPCAGLGAIKAATAHYSVMVKGTSQVFAGGPPVVERGMGVKV
DKEDLGGSKIHTRESGVMGNEARSEAEAFEMARRFLSYLPSSVYEMPPVIESDDPKERREEELIEIIPRD
KRKVYKSRKILDMVFDRGSVFELTKGYGRSVVTCFARLGGRPVGVITTDPMQYGGGMTKASAAKMEAFID
LCDTFHLPIVHMVDQPGTIVGPEAERSGAVKGSVRVCMAIEQSQVPWCAIITRRCYGLAGSTFGRVQGIN
LHYAWPSGRWGSIPVDGGAEAAFKKELDALDPEARAARLAEIEGHFFHMESPFLTAEKFRIPDIIDPRDT
RALLNDWLDDSWKLIADQLGPKGRTFRM
>gi|56697389|ref|YP_167757.1| biotin/lipoate binding domain-containing protein [Ruegeria pomeroyi DSS-3]
MSDETIESEIAGTVWKIEVKVGDTVEEEDVLMILESMKMEIPAEATCDGTVAEILVSEGDGITEGQALVR
ITPTQ
>gi|56697390|ref|YP_167758.1| GntR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MYQQTTALHRAMLASLRPSLAGGSEALSISEQIAMQLADEIVNEKYSPNDRLQEIGISERYKVSRGPVRE
ALRILENAGLVTIAPRRGAIVTQLSAEEVADVFDIRAVLSGLGARRLAETRSQDDIKMLERQLSVLKKLA
KKSGSTAAADYVHAVVEFGLSISEASGNTRLNSMVTLLFHQTLRYSRLGLSSPERRAHSCENWAELVDHI
VHGRGEDAEKTARRLVDQSKIHAIRLLKDEANAATDQIR
>gi|56697391|ref|YP_167759.1| amidohydrolase family protein [Ruegeria pomeroyi DSS-3]
MQFIDAHHHLWDVELNGANYPWYTEDHGDRGWGDTAAIMRNYKPADLLADAQDADLTIVKSVHVQANFDF
SNPVAETRWLEQVAREEGSGNLPNAIVGYADLSASDVGDVLEAHAESARFRGVRQVLNRHDDPKLNRAPQ
DYLADPNWAAGLRRLSDMGLSFDAQIYHHQAAALADIAKGLSDLNIVIDHALMPAERDEANLEGWRKAVT
RLAELPNVSMKISGFGMVDNAWTTDSIRPFAMHCIEAFGPGRIMFGSNFPVDKLMSDYGRLWRAYGEIIS
DFSEEEREQMLTGTAARFYRI
>gi|56697392|ref|YP_167760.1| TRAP dicarboxylate transporter, DctP subunit, putative [Ruegeria pomeroyi DSS-3]
MKFGKMKATLLGGALAALTAGAAIAEAEIKLVFGVAGQPTWGFGKLLTEVIEPNLEKYSDGRIDLEVHQR
GALCSEAACMEQLGLGQIDMTTVSAGNMGAFGKTFDILNLPYLFKGQQEAETIMRGWLSDELAKQAAGEM
GIHVLATVSSGGFRNVVNTEREVRVPSDLKGLKIRVTKSPTEFNLVQGWGAVPIPYAWASLYEGLQSGVV
QGMYLQDVFVSAAKFYEVTKFVTRVESSYSGRPVMMSKQRYDALPDWAKEAVDKVAADIAREALNYDLAW
QKDAIAAMQDKVSVYVPTEAELAEWSKGAVEAWVAVKGTYDPALARRILEEQGLSELIGLLEEAGAL
>gi|56697393|ref|YP_167761.1| TRAP dicarboxylate transporter, DctQ subunit [Ruegeria pomeroyi DSS-3]
MPVLKRISDGADFIILRILPVICGAMLVLMVAFIAYTVIMRTVFLNPPFWGDTLAMFANVWMVFLGLIIA
VRERSNIAMEALYQLIPAHYGRWFRKLWAVAFAGFGLLLLTKGYEAASRILGSYWELGNLPKSYPLMILP
ITGVGILVASILSLFRPLDEAPHMDDQEFP
>gi|56697394|ref|YP_167762.1| TRAP dicarboxylate transporter, DctM subunit [Ruegeria pomeroyi DSS-3]
MSKREGRGQMEIVLLVVCFVVLVLLGAPVALAMILMPTTYILLTDAAPLLTVPHQMYEGIAHFPLVAVPF
FMLTGELMNGSSVTQRIMRLSRVIVGRMRGGLAQVNIVASMFFAGMNGSAVADTATIGTIMIPDMKRKGY
TPAYAAAITAIGSTIGGIIPPSIAMIVLASSVNLSVGALFAGGILPGILIGLLLMLTAWIIAKAKDHERG
DEPFTFRAFLSAAWGASLALCVPLILVVGIFGGWFSSVEAGAITALVALILGTVVYRDLDLASFLGALNR
TVRMSASVFVIIAAAGPFTWLLARLGALEMLQNWLLGFAETPFFFALMLLGLILLAGMIMDAAANIIVLG
PLLVAACETAGYEPVQAALVVVVGFLLGTVTPPVGVCYFTATAIAGCRLEQSAAALLPFLAVEILVLLLM
LFLAPLTLFLPALLGFL
>gi|56697395|ref|YP_167763.1| zinc-binding dehydrogenase family oxidoreductase [Ruegeria pomeroyi DSS-3]
MMKALMSKTPGGPDSLSLENIAEPVPGKGEVRIAVKAVGLNFPDLLIIRDLYQFKPPRPFAPGSELSGIV
ESTGEGVTQLKAGDRVLAFSGWGGLAEQVVVPESRISRIPDQMPFEDAAAFMMTYGTSYHALKDRAGLGL
GQTLLVLGASGGVGLAAVELGKILGARVLAAASSEDKLQTALDAGADDGLVYPLGEINKKELSTRFKELC
GKSGADVIYDPVGGDYSEPALRAIAWEGQFLVVGFPAGIAKLPMNLPLLKACSVTGVFWGAAVERNPAQH
AEATAELFDFYLKGKVKPKVEVMQGLENAAAALEKLSQRKVQGKLVVSLG
>gi|56697396|ref|YP_167764.1| phosphotransferase family protein [Ruegeria pomeroyi DSS-3]
MMVKPLHEFDRSELGSYLAAHVEGFDALDKIERFGGGQSNPTYKITSGARTFVLRAKPPGKLLASAHQVD
REYRVLRALSDTPVPVPQVYHLSGETSPLGTMFYVMEMLDGQIFWDPALPELARDRRGAVYTQLSRTLAA
LHDVAPTQMGLRDFGAPGDYFARQLARWTKQYRASTDAENPLIEQLIEWLAAHQPEDDGQVSIVHGDFRI
DNLVFSKDASRVIGILDWELSTLGHPIADLAYFCMCLRLPQSGLVKGLGSANRDDFGLPTEESIVAQYCV
QRGIEPPAFWTFALAFSLFRLIAIATGVLKRAQQGNASNPRGEAETRRIIETLTKLAGDVIAG
>gi|56697397|ref|YP_167765.1| GntR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MQVAEAIKDWVVEQGLQAGDRLPGEAELIERFGMAKGTIREAMRILEAQGLIKTRTGPGGGSFVHEVSQQ
RAKALLGNYFYFKDLTIGDIYQLRLTLEPELAASLAGKLSQSTLDLLEKTTAEYVEPAATLDEERDQHVA
SLRFHAILANQSQNPLLGFVIDFMVNLLTDLTVYRRLYSPPNIELWKQGRDHQQQLIAALRNGEADKARA
IMTDHMKTAWKLMRQQEVEMESRFISE
>gi|56697398|ref|YP_167766.1| peptide/opine/nickel uptake ABC transporter ATP-binding protein [Ruegeria pomeroyi DSS-3]
MPALKVTNLAKTFPLKKPIFGSAPPGVRAVRPMSFEVATGETLGVVGESGCGKSTLARMLVGLLEPSEGS
IEIEGRALDNADPAEFGKLIQYVFQDPQSSLNPRKTIRQVMEAPLRRLYGMPKPERDRRISEIFASVNLR
EEFLDRYPHEFSGGQAQRIGIARALAANPRIIILDEPVSALDVSVQAQVLNLLADLKAQFGLTYLFITHD
LAVVEAVSDRIVVLYFGAVVEIGRAENIFAKPRHPYTRLLADSAPVVGKPLTAPEQKGSELPDPLNPPPG
CAFAGRCPRATEICRADEPKLTEMGEDQLAACHHPLEG
>gi|56697399|ref|YP_167767.1| peptide/opine/nickel ABC transporter, permease/ATP-binding protein [Ruegeria pomeroyi DSS-3]
MNLFLKLLFRNRLAAMGAVVLGAILLLVLLTPFLPLQDPDVTATADRFKRPFSEGHLLGTDHLGRDLLSR
LLHGTRLSLAVGIAAALVAATIGSTIGIVAGYFGGRVDNIIMRIVDMLMAFPYILLALAIVAALGPGLMN
ALIAVAAVNVPFFARNIRGITVGLAGREFIDAARLAGMGHARIILTELLPNVLPVIVIAMSTTVGWMILE
TAGLSFLGLGSQPPQADLGSMLGEARSAMISHPHTSIVPGIMIFLIVMSINLLGDGVRDALDPRLRSGAL
SRPRATTLVERQGDIPAATDDLLAIQELETQFHVGDRIYRAVGGVSLAVKPGECLGVIGESGSGKSVTAL
SVMGLVASPPGVITGGAVRFQGEDLIGAPYETLRQRRGDRVAYIFQDPLSTLHPLYRIGQQLAEAIQSHH
KVSNAEARARAIQLLKDVRIPNAESRVDNYPHEMSGGMRQRVGIAMALANEPDVIIADEPTTALDVTVQA
QILSLLDDLRRDRGLAIIFITHDFGVVAQLCDRVAVMYAGRIVEQGPTQAVLEAPAHPYTKRLIACVPEL
GGGRRELAAIPGLPPVVDNLPEGCAFAPRCDKAQESCRAGDVALKGTAPRAVRCLYPEVAV
>gi|56697400|ref|YP_167768.1| peptide/opine/nickel uptake ABC transporter permease [Ruegeria pomeroyi DSS-3]
MGSYIIKRLISAIPVLLGITIIVFLIMSLIPGDPATAILGSYATPENVEKLNRDLGLDKPMVQRYVIWLG
NMLTGDFGRSFSLNRPVLDEILERFNATMILAGTAFVLCALLGILAGVVSAARQYGFADKAITFVVLIGI
SVPSFFLGMMMILLFAVNLRWLPVSGMYAIYGGGDLPDLLKHLIMPALALAAVATGVIARLARSAMLEVL
RQDYIRTARAKGVPERRVIMGHALRAAMVSIIPVLGIQAGFVLSGAVYIEIVFQWPGVGRMLVDAILKRD
LLLVQGGVVFVAACYVLFNIAVDVAQSLLDPRIKT
>gi|56697401|ref|YP_167769.1| peptide/opine/nickel uptake ABC transporter periplasmic substrate-binding protein [Ruegeria pomeroyi DSS-3]
MQFIMIIINAEHQQGEHEMTPLSWSRRGLMAAVGAALVAGGLSGSASAQTPPGVLIVGQIAEPKSLDPAA
VTAVNDFRILVNVYEGLTRYKSGTLEVEPALATGWDISEDGTEYTFTLREGVSFHDGTPFNAEAVKFNFD
RMLDENHPFHDTGPFPLSFFFGAVEKTEAVDDMTVKFTLNAPYAPFLSNLAYPTGLMVSPTAVEAHGKEF
GRNPSGTGPFKFAEWRSNEAVVVERNDTYWGEVAGTQAVVFRPITDANTRVAEMLAGGIDMMVEVPPTSL
GQFQGDGFSVAEQAGPHVWFLILNAKEGPFADKRVRQAANYAINKEAIVNDVLEGTATVAAGPTPPAFAW
AYNEALDPYPYDPEKAKALIAEAGAEGAELTFFVTEGGSGMLDPVPMGTAIQADLQAVGLNVKIETYEWN
TFLGEVNPGLEGKADMAEMAWMTNDPDTLPYLALRSEAWPDKGGFNSGYYANPKVDELLEAARTATDQDE
RARLYREMQTIVQEDAPWVFVANWKQNAVTSDRVENFGLEPSFLLHLQGVVKN
>gi|56697402|ref|YP_167770.1| hypothetical protein SPO2555 [Ruegeria pomeroyi DSS-3]
MTFSILAHDPETGAIGGAAATGSLCVGGWVLRGDLNAGMSASQGAAPSTFWGEEVLQHLRDGSHPEDAVN
HVTSQDSGRAYRQLAAMDLLGNAAAFTGSENQDIKGSVTFASGIASGNMLGDNSVLGAMTEAFVASDLTF
ERRLLAALIAAEGAGSDFRGLLSAAMLVLHPDRPPVTLRIDYHPDNPIGALEQLYQKATTGDYADWARQV
PVLSDKERILD
>gi|56697403|ref|YP_167771.1| allantoate amidohydrolase [Ruegeria pomeroyi DSS-3]
MTDWGARAQALLKDLAACSEAGPGVTRLPFTPEHRAACDLLWTHMEATGLTVTLDDAGTLVGRYEGPPDS
KTLLMGSHQDSVREGGAYDGIMGVVLPLLALAKLRAEAVHLPFSVEVLAFADEEGVRFPTALVGSRALAG
TFDPAVLSMQDARGVTLHDAMTSFGLNPDRIGALRRDPADVIGFVETHIEQGPVLEQAAQAIGVVTAICG
IERHQIVVTGETGHAGTLPMSGRRDALVAAAAIVTEVDRLGQTIPDLRATVGALSVEPNVVNAVPRRVTL
TAEFRSPDDATRRNTGAMLHRYAQELAAQKQLKIKAERTYSQVAQPSDGALSAQLLQAARQAEEHGPLLP
SGATHDASAMADLCPIAMLFVRCRDGVSHKPEEFASADDMGSAIAALAAFLRTLNPQTD
>gi|56697404|ref|YP_167772.1| gluconolactonase [Ruegeria pomeroyi DSS-3]
MTEPCYVMVDQRFDEFVDTARAPEQIVHGFAWTEGPVWLDGAPFFNDIANKRMMRWTKQACAEVALDNSE
FANGNTLDGAGQVVSGEHAGRRVIRRPDPTDPSAVEVIAERSEGKRLNSPNEVVVRSDGSVWFTNPPYGI
NSDIEGYPAESEIGGCFVFCPDPDGTLHAVATEFDKPNELAFSPDECRLFVADSGAIRGAIFPGIDDDLP
HHVRVFDVDGVTLSNGRVFAVVAPGAPDGFRVDHEGYVWTSALDGIHCLSPEGALIGKIWLPRQTSIICF
GGPPGQTMFITSSDKVYRVESTRRDAAHALRDRERNAE
>gi|56697405|ref|YP_167773.1| 2-hydroxy-3-oxopropionate reductase [Ruegeria pomeroyi DSS-3]
MSMNIAVFGLGSMGYGMAQSCLRAGIGVHGFDVVAEQVARFVKEGGSAAAFAEVARSLDAVVVVVLNAAQ
VEQVLFGEDGVVTQMREGAVVLACATVPPEFAKEMERRCAEKDVLYLDAPISGGSLKAAQGRLGIMASGS
AAAFAAAEPVLEATAETVFRLGDAAGAGSAMKAVNQLLAGVHIAAMAEALTFGMTQGVAPDTFLDVISKC
AGTSWMLENRAPHVIAGDYAPHSQVNIWPKDLGIVLDAAKAAGFEAPITETALARYRQAVDMGLGGEDDA
AVAKVYAAQAKLTLPGAQS
>gi|56697406|ref|YP_167774.1| ygbK domain-containing protein [Ruegeria pomeroyi DSS-3]
MKLGCIGDDFTGSSDLANTLAKQGMRVVQYSGIPSRDADAGVEAVVVSLKSRSIDPAEAVAQSLKALDWL
RAQGCSQFFFKYCSTFDSTPQGNIGPVADALAEALNADRVIICPAFPGTGRSVYQGHLFVNDRLLNESGM
EHHPLTPMTDADLRRWMASQSKFSIGHVSAQAVFAGPRAITEALDAEHAAGKRHIVVDAIRDADLMAIGA
AATDLKLVTGGSGVALGLPRNFGCTPGVPEWRGQHGPVLALSGSCSMATRAQVARHAARYPVRDLRAEDV
IENRVAPADVLDWALKADGVPLVYSSADPAQVKAVQDRFGRERAAAAIEHFFAELARRAVDAGVTRIITA
GGETSGAVVEALDLEELIIGPEIDPGVPALRAGPDLVVALKSGNFGAEDFFEKAAGVLGA
>gi|56697407|ref|YP_167775.1| putative aldolase [Ruegeria pomeroyi DSS-3]
MSETRLREDLCRLAASLFDRGLTHGATGNISARTEDGGLLVSPTGTSFGRLDPARLSRFDAGGRLIEGDP
PTKEMPLHSAFYDTRSTAGAVVHLHSCHSVALSLLPDIDEDSFLPPLTPYAIMQLGRVKLLPFFVPGDPA
MGDAVRGLAGKRSAVMLANHGPVVAGKSVEAACNAIEELEATARLALMMRGLPARALSSEQISRVVSKFD
VEWDE
>gi|56697408|ref|YP_167776.1| hydroxypyruvate isomerase, putative [Ruegeria pomeroyi DSS-3]
MTAFSANLGFLWVDRPLPDAIRAAKAAGFDAVECHWPYETRAEDVKAALDETGLPMLGLNTIRGNPGENG
LAALPGREDEAHAAIDQAIRYADAVGAGAVHVMAGFAAGPQARAMFERNLDYATSRTDRTILIEPLNRHD
APGYFLQTTGQAQEIIKSVSAPNLKLMFDCYHVGRTEGDILTRLTELLPLIGHIQFASVPDRGAPDHGEL
NYAEIFSHISKLGWTTPLGAEFKPRETDEITRWLTSFRSGG
>gi|56697409|ref|YP_167777.1| hypothetical protein SPO2564 [Ruegeria pomeroyi DSS-3]
MTDPLPCCDAARRNLFSLQLQDLDKAERPMSGRF
>gi|56697410|ref|YP_167778.1| ribosome-associated GTPase [Ruegeria pomeroyi DSS-3]
MTRDYSNFLPQRARDGGSQASLSPLQALGWQPFFAQQVSVDDMIATPPVRVVEVHRSGLHVLGDDIDTTL
PPRADVTVGDWLMLDPSHPRSSRALERTSLIKRRAPGTDRQEQLIAANIDTVFIVTSCNQDFKVARLERY
AALAFEARITPVIVVTKTDLVTDAQSYIDAARAVSEMIEVVALDARGSAPKADLAAWCKPGKTVAFLGSS
GVGKSTLANALLDSQFIETQTIREDDAKGRHTTTRRELHAMPNGCLILDTPGMRELQLTDAADGINDLFA
DIQELATQCRFNDCQHETEPGCAVLKAVDEGVLDARRLGRWRKLMAEDAFNSASLAERRSRDKAFGKMVR
GVKKIKDVRR
>gi|56697411|ref|YP_167779.1| glyoxalase family protein [Ruegeria pomeroyi DSS-3]
MSGGETMTQSKAGQIVWHDLFTSDRARSMAFYQHVASWTYQIERATDFAWGGGEKDFVLALSGDEAGAGF
AETPSGQQNGWIAYIEVPDVDAAVSRVVTLGGKIVREPFEVPGVGRNALVRDPLGAIVGISLSRHSFPVP
RRQFGPEMYVSNGNDFPQTFYADLFGWQVSPERVKDRVALLGPGGDLVATHHAATLPAGSNSVWVPCIKV
ASVSDAFRAAETKGARPASLEVNETVQVHDPILCDPDGAPFVLGVTQTTTF
>gi|56697412|ref|YP_167780.1| hypothetical protein SPO2567 [Ruegeria pomeroyi DSS-3]
MTMMTDPVAAPSNPGWLHRSEAWLDSKGKGAWIAAMVLGFIFFWPLGLALLAYMIWSKRMFSKSCTRRKA
WSHHGMRAMSTTGNSAFDAYKADTLARLEREQADFEAFLHRLREAKDKAEFDDFMDERVRKARDDERSSK
GRDDDSDDA
>gi|56697413|ref|YP_167781.1| RDD family protein [Ruegeria pomeroyi DSS-3]
MTHLPHPDHQPEFYQSIPAKRFFAWVFDTCVILMLSLVVVLLTAFVGAFVWPLLYLVVGFVYRVATIAGG
SATWGMRFVGIELRDAYGAHLNGGQALAHTAGYTVSMALPLLQVISILMMLTGSRAQGLTDAVLGTVALN
RRAYA
>gi|161598432|ref|YP_167782.2| arginyl-tRNA-protein transferase [Ruegeria pomeroyi DSS-3]
MRHTLPIAPQFYVTAPQPCPYLAGRMERKLFTALQGEGAERLNNALSQQGFRRSQNVLYRPSCADCAACL
SARIDVSAFRASRSQKRAMRRNAHLTRRATSPWATDEQYELFRRYLDSRHADGGMADMDVFEFAAMIEET
PIRSRVIEYAHRDTRALIGVSLTDVLDDGLSMVYSFYDPDLHRDSLGTHMILDHIAIAREAGLPYVYLGY
WVPGSPKMGYKSRFSGLEIYLGGRWQAMTDPEAHDAIRHPLSTDPIAEQVANIQLPDRWPTGD
>gi|56697415|ref|YP_167783.1| glyoxalase family protein [Ruegeria pomeroyi DSS-3]
MRLFALSLVVPDYDAAITFYCGALGFHLDQDEDQGNGKRWVRVSPPGGGASLILARAVNPRQTAAIGNQT
GGRVGFFLETDDFARDHTAMLAKGVQFEEAPRHEPYGIVAVWRDPFANRWDLIQFT
>gi|56697416|ref|YP_167784.1| TRAP transporter, DctM subunit, putative [Ruegeria pomeroyi DSS-3]
MLFGLDGVEVGLIIVFLCLFGGILSGFPVAFAIGGAGIISFGIIAALDSAGLLIHQAIDTSSQAYAELIG
AGVKPDAISVFRYPELPRIAEHVFKGGWETAMDRNVSFIVNRMNERVLAGQSIETLLAVLMFVLMGITLE
RSKIANDLLTTMARVFGPLPGGLAVSIVVVGAFLAASTGIVGATVVTMGLLALPTMLRNNYSPELATGVI
AASGTLGQIIPPSIVIVLLGTLAGDLYSTAQETRAIEAGCTDALTFLGEPAVVSVGTLFQAALLPGILLA
LLYALYAFGYALLNPDKAPAVAMGGGSGEPITRGEGFTWLLGAPVALIAGVLLLGSLGVVGSQDVTVSTF
SDSSKSASLRTNVGPECKASMIALHGQEAWDAALAEQESIDAAGGVQESHRLSAEEIAEARATKIADAAP
IGTGVAVIAVLLGLTLVVGRGIAPSRDPKPLLVGGLGLVLMLLADILFIGPLTSPGVTVLILLVPLALAL
YGCKAAAIRCTGNDLIRVVFPPLVLIIAVLGSILGGITNPTPAAALGAGGAIMLAAYRKLKDEGRTGNVI
IWSTFAIIICLLIGVNFDLRINQDGVSVETWIAFIFAYATYIYALGGLLFGCWVLFAGGVLTPIVRETAK
VTSMVFTILIGSQLLNLVVISFGGEHYIQQFLKSFDNEFTVFLIVMLVLFILGFVLDFLEIIYIVIPIVG
PVIYGGSFDPKWVTIMVAVNLQTSFLTPPFGFALFYLRGVAPKEVTTGHIYRGIVPFVIIQVVGIAILWS
FPSIVTIVPALIPN
>gi|56697417|ref|YP_167785.1| hypothetical protein SPO2572 [Ruegeria pomeroyi DSS-3]
MYFRPFMWGMVRLLEGFANTTGRFFAWAGLLMVLQQIIIVFMQRVFARPDLSFGFGIPVTLDVSWWSEEL
KLYNAMVVCLCATYTFVQGGHVRVDLIYSGLSHRGKRVVDMAGSLLFMMPMAVVTWLYGWYFLWRHLIVP
NPSASDQLDRLLMKSRALRWNVETIGFSPNGFNGYFLFKILLVTFAAMVFIHAVAFFYRSWLEFVEGEGS
AGKFLDKDSLGEGEEAYEGTH
>gi|56697418|ref|YP_167786.1| solute-binding family 7 protein [Ruegeria pomeroyi DSS-3]
MDRRSFLKTSAMGGAAAAATTALAAPAYAQGKRTLTMVTTWGRGLAGVHDSAQRVADNITAMSDGNLTVD
LKAAGELVGAFEVFDAVSSGQADMYHGADYYFVGQHPGYAFFTAVPFGMTAQELVNWYYHDGGHELHDEL
GQIFGLKSFLAGNTGAQAGGWFSKEINGPEDFNGLKFRMPGLGGKALGKLGASVQNIPGSEVYQALSSGA
IDGTEWIGPWADEKAGFQEITKTYYTAGFHEPGAGLSVATNREVFESLSPAHQKIIEVAAGECHQWNLAQ
FLSNNGSALQRLQAGGVKVLEFPDSVWDAFGKASQDVMAENMGDELFKKIHDSAMASMKSSSAWLNMSSG
VYTAQRDRVLG
>gi|56697419|ref|YP_167787.1| sensor histidine kinase [Ruegeria pomeroyi DSS-3]
MIRSVNTYYYVAARKKLANDLEIHCFSGTGRPQKRGSAGQDLIACFDFAGGFAYRFAMHRLRSLIRPNYA
QKISLLATLPLVLAVAAIAALVAYQARTLAEREIQALERQLLQAKKAELRNYVTQARNGFAHIYGPAAPD
DAEAKTRVAQMLAAMIYGQDGFFFVYDYEGKNLVSPRQTEFINRNWEGLTDSKGVPVVDEFIRLARQGAG
WHSFMWEKPSTGEEAQMVAYVVGLQDWRWAVGTGVFIDDVLASVAAARAETQARVRRTFLYIGAIALAAL
LIVFGSGMVINIRERRLADAKLKELTQRVFDAQEEERGRVARELHDGISQILVGVRYALDNARRRLARGD
HEGAEPPLDKGIDNLGSAISEVRRISRDLRPGVLDDLGLGPALKSLTDDFRERTGIATDFTTVVFRNRLD
QNSKIALYRIAQEALTNIERHSGATHVSIDLRGHKKGATMRISDNGRGIRSTPGRPGPGLGLRNMQERIE
QLDGNLRILSSRGAQSGTVIEVSLPLSHLLPPQEEPASKRKALP
>gi|56697420|ref|YP_167788.1| LuxR family DNA-binding response regulator [Ruegeria pomeroyi DSS-3]
MTDTPVRVLIVDDHPMVAEGIQAILESYDDIQVIGTVGDGREAVGRSLALLPDVILMDLNMPGLGGLGAT
EIIREQMPDTRILILSMHDSPEYISTALSHGAMGYVLKDVPTEEIKQAIDAVMRGERYLCTGAKGSLEPK
EGEEAREALTGREQTILLQLAQGKSNKEVAIALDISVRTVETHRKNIKRKLGISSTAGLTRYALEHGVLQ
GTGGGL
>gi|56697421|ref|YP_167789.1| TetR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MHPRKIEIVTAAVTCFLERGYHQTGIRDIARQAGVSLGNLYNHFAGKEAVLAFIAELEGRELAAFVDMLS
DPEEPYAALERFIWAYAAYAARPENALLGLELMAEALRNPTISQVFDGNRHQLVAALMGCLERGVSTGRF
RHLDDTRALALMILDTLEGQGLRQLDRKTPDPDAVRTLCAVLTTGLLARDQSPPPVPCNTPCSSA
>gi|56697422|ref|YP_167790.1| hypothetical protein SPO2577 [Ruegeria pomeroyi DSS-3]
MGRSRAVDPNRIRIMTAHSSRLAGLDLARYLAFVGMVIVNFKIAMGAEGGAGLLAQLTGALEGRAAATFV
VLAGIGLGLSHQQHAAQTTASTVRRALVLLALGLLNMTVFEADILHYYAFYFLFGALLLPLGSASLAALV
LGLNALFVGLCFTLDYDAGWDWQTYTYTGFWTPTGFLRNLMFNGWHPVVPWLGFLLFGILLSRMPLAERR
TQRGLIAGGFVALALAEALSARLAVALATLNPGLALLAGTEPVPPGPLYSMAGIGAACIVVGACLIGAEL
APGKALLRIVGPAGRQTLTLYLAHVLVGMGVLEAMDLLGGQSVAGATAAALLFCAAATVYALLWSRAFGR
GPVEALLRRIAG
>gi|56697423|ref|YP_167791.1| acetolactate synthase 3 catalytic subunit [Ruegeria pomeroyi DSS-3]
MTREMTGAKMVVQALKDQGVDTVFGYPGGAVLPIYDEIFLQNDIRHILVRHEQGAVHAAEGYARSTGKPG
VVLVTSGPGATNAVTGLTDALLDSIPLVVLTGQVPTFMIGSDAFQEADTVGITRPCTKHNWLVKETDKLA
KTIHEGFHVATSGRPGPVLIDIPKDVQFATGQYQGPKGLTSHYNPPVKGDMEEITELVAAIEKAKRPVFY
TGGGVINSGPAASQLLRELVDATGFPITSTLMGLGAYPASGKNWLGMLGMHGLYEANMAMHGCDLMINIG
ARFDDRITGRIDAFSPKSKKAHIDIDPSSINKVIRVDIPIVGDVGHVLEDILKVWKARGRKTNAEAVQKW
QAQITEWRKVSCLTYKPSEKTIKPQYALERLEALTKGRDRYVCTEVGQHQMWAAQYLGFEDPNRWMTSGG
LGTMGYGFPASIGVQMAHPDALVINVAGEASWLMNMQEMGTAVQYRLPVKQFILNNERLGMVRQWQELLH
GERYSQSWSEALPDFVKLAEAFGAKGILCKDPADLDDAIMEMLNYDGPVIFDCLVEKHENCFPMIPSGKA
HNEMLLGDAETQGVIQAGGAVLV
>gi|56697424|ref|YP_167792.1| acetolactate synthase 3 regulatory subunit [Ruegeria pomeroyi DSS-3]
MSALHIKKGSSSHSAYNLRPTFSDVAERHTIALLVENEPGVLARVIGLFSGRGYNIESLTVAEVDHTGHL
SRITIVTTGTPQVIEQIKAQLGRIVSVRDVHDLTVEGRSVERELAMLKVVGSGDKRVEALRLADIFRANV
VDSTLSSFVFEITGAPEKIDAFADLMRPLGLAEIARTGVAALLRGD
>gi|56697425|ref|YP_167793.1| hypothetical protein SPO2580 [Ruegeria pomeroyi DSS-3]
MGRDMFGVVLWSDSDDQKAVIWCEDHGDLAFYRRTDAQAPVSLDVGDWVQFDLVTERKQRLAFNPRLIDQ
GSYRGLPDLLREAETEGTGGAAPEGPVAKVIPFSGPAGRKRDRLPNGEACHA
>gi|56697426|ref|YP_167794.1| DNA-binding protein, putative [Ruegeria pomeroyi DSS-3]
MTKTTRTPAELRNMFGENLRRLSRRYPSISELSRQLGINRTQFNRYLSGESFPRPDVLDRICNFFDVDAR
ILLDPVDAIPASDQILSGPALAEFFGPDVTRLDEDDFPSGFYRFTRRSFVSERKFVLGLVYVFRENNATY
IRGYEALEAMRQQDLPDDPRTREFRGYVTREDDGVTLLISRRNAMTFSFNYLSRVASFENNFWVGYVSRS
VREPVSGHRITRMVYEHLGRDRSAIWKTARQAGFIDAEDLLPFHRRLLRPDEPFR
>gi|56697427|ref|YP_167795.1| hypothetical protein SPO2582 [Ruegeria pomeroyi DSS-3]
MIEKPFGVPPMHPANMAMLRQALAAGLRDYLRAPLFGVLFSGFYVMSGLLMAWITIWTGTTFWLVLAAIG
FPLLGPFAAVGLYEVSHRLEQGEPLDFAEIFGVVILQSRRQLPSICAIMVLVFMFWFFLGHMIFALFLGL
STMTNVSSSMEVFLSPNGLMMLAMGTVVGAGFAALLYMITVMSIPMLLDRELDFVTAMIASFGFVTANPA
VMLAWAVILAVMTFVAMLPGFLGLFLVLPWLGHASWHLYRQVTRDDAGT
>gi|56697428|ref|YP_167796.1| amidase [Ruegeria pomeroyi DSS-3]
MDVIRSSASDILGALRSRQLSSEAVMEATLARIAAVNPELNAIVALRPTDELLAEARAADAVAPEARGAL
HGLPIAVKDLVETAGIVSSHGSPLFRDHVPERDDLIAARIRAAGAILIGKTNVPEFGLGSHTFNPVYGAT
GNPYAPNLTCGGSSGGAAVALATGMTALADGSDMMGSLRNPAAWCNVYGFRPSWGRVPSEPLGDTFLHQL
ATLGPMGRSPADIAILLDVISGADPRQPHGFDSAPVAPLRPAATRGLRLGWLGDWGGAFPTEPGILPLCE
TALKIFSDLGCTVEKVPPPFDAEALWESWITLRSWSVGAGLAPLSEKRAQLKDSAQWELDRGLALSAMEV
DRASVTRSAWFMRATELFESYDALILPSAQVWPFDLDRPYPTEIAGQAMDTYHRWMQVVTPVSLIGLPSL
AMPAGFGDAGLPMGVQIFGPRGGDAALLALGEAYHAATTWPQRHPGM
>gi|56697429|ref|YP_167797.1| glyoxalase family protein [Ruegeria pomeroyi DSS-3]
MRLAHVCLIARDAPALAEFYCAALGCSPRRPATRLSGAWVGHGIGLPEAEILSIWLNLPGGDAPFLEIQH
FASTRDHAQPQPDTPGLRHLAFVTADIEATARAILAAGGSQQGKITDLGSAEHPGRALYMRDPEGNLIEL
EQG
>gi|56697430|ref|YP_167798.1| peptide chain release factor 2 [Ruegeria pomeroyi DSS-3]
MRAEIQNVVTDIQKSLRLLAQRMDQETAQHRLEEFNARVEDPNLWDNPENAQKLMRERQTLVDALDIYKG
IETDLADNIELIELGEMEDDQDVIKDAEAALKALRERAAEKELEALLDGEADGNDTFLEINAGAGGTESC
DWASMLARMYVRWAEKKGYKVELQSESAGDEAGIKSAAYKISGHNAYGWLKSESGVHRLVRISPYDAAAK
RHTSFSSVWVYPVVDDNIEIEVNPSDIRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVTSSEKSQHQN
RDIAMKALKSRLYQQELDRRNAEINAAHEAKGDAGWGNQIRSYVLQPYQMVKDLRTGHETSDTKGVLDGA
LDGFMAATLAMKVSGKSRADAQSED
>gi|56697431|ref|YP_167799.1| type I secretion target repeat-containing protein [Ruegeria pomeroyi DSS-3]
MPQGYLVTLGDGSLNPNDVIGGGLTTFSTDTALGAGSWTWSGTAGGTSYFNEVEPGSYYLSTDGNVYFVP
DYGPVDSISSASATTAPAYSSNDGIVSGTDAGEVIDAGYTDTDGDQIDNGGPTSDTVDAGGGNDTVSAGG
GADKVIGGEGDDSLMGGSGGDTLIGDADPSALAPDPVTIDITNYADTGSGFTVTAQNVVGGALTSASSAN
IGTYSGGFGASGTISDSDSAVSAQIGYDKASGLSENVTITFDNGASEASFDFAHLYTAGYAEVGHWAVYN
DGTLVAEGDFTEQGSGSGSGTISISGVGSFDTLVLTAKPQTDGTDGSDYTVTGVTFTPLPEEVIPGNDTL
DGGLGDDLLDGGGGDDSLIGGAGSDSLTGGAGNDTLIAAEGDSVLGGSGDDLIQITDLSETGSGTITIVG
GDDGQTDGDTLDFQGNLDWGSLNITSTDTVTGAMSGSALLADGTVVNFSGIENIICFAAGTRIETDRGGR
AIEDIAVGDLVLTRDNGLQPVRWTGRRSVPGKGRFAPIRIASGKLGALRDLLVSPQHRLLLSGYQASLLT
GQTEVLAAAVHLRDDRHIRRAPCPTVTYVHLMFDRHEIIYAEGVASESFFPGSLGLEALAEPARDELFAL
FPELRSGCGGFDETARLCLRQHEASVLARALLQ
>gi|56697432|ref|YP_167800.1| penicillin-binding protein 1A [Ruegeria pomeroyi DSS-3]
MIRFILSFFGAIFSLVTLGVFMVALTIGGVFWMYGRDLPSHESLAQYKPPTISRIYSGEGQLIDEFAKER
RLFTPADEIPDLIKQAFISAEDKNFYTHQGYDLRGIAAAGIEAVRSRGSNVRGASTITQQVMKNFLLSGD
RKAERKIKEIILAARLEQTLNKEQILELYMNEIFLGQNSYGVTAAAQTYFNKTLAELAPHEAATLAAMPK
APSDYHPVRERQRLLDRRNYVLREMRENGYIDMATYEAEREMPLRSVQNGDFEGFRTALPPRDYFTDEIR
RQLSEDFGEGEFFTGGFTVRASIDEEMQVEAAKALREALQKYDRGRGKWHGTGKSIEPAKLGDEEVWRAE
LAATEVARDVDLGGRWHPAVVLGVGEQDLSVGVEDGPAKGRVPRSDIKWMKGSFKDNFKLGDVVLVRKAD
EDWSLRQVPEVQGGFMAMDVNTGRVLAMQGGFSYQDSVFNRATQALRQPGSSFKPFVYAAALDSGYSPAT
IVVDAPIEVNTPQGLWRPKNASNKFYGPTPLRTGIERSRNLMTIRLAQEVSMPVVAGYAERFGVYDHMGP
FLANALGSEETTLYKMVAAYAMFANGGERVEPTLVDRIQDRFGKTIYRHDQRDCVDCLSDRLEPDQAPRI
VTNRERVMNAITAYQLTSMMRGVVERGTASGTVKLPVPTAGKTGTTNDAKDVWFIGFTSNIVAGCYIGYD
RPQPLGRGASGGGMCGPVFQSFMTEAVKKFGGGPFEIPPGGHFIKIDRFTGARLPDDASGEYVVAEYFRD
GEEPIFGLTYDGGFAMGSNLPLFEEVQQSGQQVRTSTGAVTTVGPKANFGTVSSGGLY
>gi|56697433|ref|YP_167801.1| N-acetylmuramoyl-L-alanine amidase [Ruegeria pomeroyi DSS-3]
MSRIFLCLALIWAALPALAQDFSGLARIRPDESRIETVPRGGLRLVLGLSQGVPYRLFTLDAPRRLVLDF
QEVDWTGLSAEALDQSDLVSALQFGTYLPGWSRMVLELASPLAVDQVAMVVDEATGGARLEVALRASDDE
SFAASAGAPQDPRWDLPAPEALPALPERGADAPLRVVLDPGHGGIDPGAEIEGVVEKHLMLRFARELSEV
LLRSGGFEVVLTRDGDHFVSLERRIALAHEAGADVFISLHADSLSEGLAHGATVHVLAQEASDIASAKLA
ERHDRDDLLSGVDLSATDDRVTDVLLDLARQETRPRTEALARALVDGMTQQGGPMNRRPLRGASFSVLKA
ADIPSVLIEIGFLSSPRDLKNLQDAKWRAAMAAGIRNGLENWRQADLERRGLVRQ
>gi|56697434|ref|YP_167802.1| aminotransferase, classes I and II [Ruegeria pomeroyi DSS-3]
MAAHWEIAVKNSSRSAVDPFIVMDVMEAARRAEEAGRRIIHMEVGQPGTGAPRGAVEALAKSLETDALGY
TVALGLPALRQRIARLYGEWYGVDLDPGRVVITPGSSGGFLLAFTALFDSGDRVGIGAPGYPSYRQILRA
LGLVPVDLPTAPENRLQPVPADFAGLDLAGLMVASPANPTGTMLDHAAMGALIEAAQAQGASFISDEIYH
GIEYEAKAVTALELTDECYVINSFSKYFSMTGWRVGWMVVPEDQVRVVERIAQNMFICAPHASQVAALAA
LDCDAELQANLDVYKANRKLMLERLPKAGFTRIAPPDGAFYVYADVSDLTDDSRAFAAEILEKAGVAVTP
GLDFDPERGAGTLRFSYARATADIEEGLDRLEAFMQARG
>gi|56697435|ref|YP_167803.1| M48 family peptidase [Ruegeria pomeroyi DSS-3]
MAFDRVSRLASIPALVLVTALWLVTAGTASAITLLRDPDIENGLEELAFPILRAAGLNPRRVKLLVVDDS
SLNAFVLDHNAIFIHSGLIQKVARADILQAVIAHEAAHIANGHIARRIGNFENAQTLSKLGLALSLIAAA
AGSGDAAAGIAAGTQSSALRGFLKHTRAEESAADNSAASYLRWSDISLRGLVDLHRTFAGQELLSVGRQD
PYMQSHPLTRDRIRNAEAFLQSYGDKAPGNPNAEYWFARVRGKLSAFSRSSKWTLGRAAEEQHRDIRLMR
EAIAWHRDRNLARARAAIDGAIALRPEDPYYVELKGQILMEHRQTQSAVATYKQAVDLAPNNALILAGYG
RALLSAGQDRAALDVLERARAREYRDLRMLRDLAVAYAKLGNDGMASMVTAERYALQGRPEDALIHAKRA
VGALPTGSPGWQRAQDVLLASERSVKRKR
>gi|56697436|ref|YP_167804.1| 27 kDa outer membrane protein, putative [Ruegeria pomeroyi DSS-3]
MMLRHIAPAVTALSLLSAPVQALDLSDMTPDQRAAFGEQVRAYLLENPEVIIEAVNLLEQRKAQEEAQQD
LELVQVNAEELFNDGYSWVGGNPDGDITLVEFMDYRCGYCRRAVPEVDELLKTDGNIRLIIKEFPILGEA
SLASSRFAVATLIVAGPDAYKQVHDALLDFTGEADEVALGRIGEGLGLDTDAILAEMESEEVTRRLAETR
ALAQRLNISGTPSFVMETEMLRGFLPADQMRQIVDALRAERS
>gi|56697437|ref|YP_167805.1| beta-lactamase, putative [Ruegeria pomeroyi DSS-3]
MKLLLSLVFAGFAFASAASAQTVVERADLMDVFEEASLSGTFVLFDVTLDQMQVVNRDRADERFIPASTF
KFANSLIALELGAVADENELLPYGGSPQPVSAWEHDMTIGEAFAVSNVPVFQHLARRIGLSRYPQWLTAL
SYGNAELGHDVEHFWLKGPLRISAVEQARFMADLARMRLPFSERTQRIVHEISMIETRNGAVLHGKKGWT
TAPDPDTGWFVGWVAQGARIYSFALNIDMNAPDDAPQRMALSLQLLDRLGIY
>gi|56697438|ref|YP_167806.1| hypothetical protein SPO2593 [Ruegeria pomeroyi DSS-3]
MDMTTLAPLAGLLPAAGFFALWYLTARRLRLSQFHIRQQTDRIKDLRRTLEGLDLELSMKEARIARLSRD
LSQSRNRPGAPMARAG
>gi|56697439|ref|YP_167807.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Ruegeria pomeroyi DSS-3]
MSHNPVRPWRNVYRRKSRQIMVGNVPVGGDAPISVQTMTNTLTTDVAATVAQVQAAAEAGADIVRVSVPD
EASARALREIVRESPVPIVADIHFHYRRGIEAAEAGAACLRINPGNIGSPDRVREVIRAARDHGCSIRIG
VNAGSLEKHLLEKYGEPCPEAMVESGLEHIRILQDNDFHEYKISVKASDVFLSAAAYQGIAEATDAPIHL
GITEAGGLVSGTIKSAIGLGNLLWMGIGDTIRVSLSADPVEEVKVGYEILKSLGLRHRGVNIISCPSCAR
QGFDVIKTVEALEKRLEHIKTPMSLSIIGCVVNGPGEALMTDVGFTGGGAGSGMVYLAGKASHKMSNERM
IDHIVEEVEKKAAALDAASAAEAAE
>gi|56697440|ref|YP_167808.1| hypothetical protein SPO2595 [Ruegeria pomeroyi DSS-3]
MAASGSVRRGLLGLGVLRLGHQQLAQGKVLFGFQVGDLKPLEDGIHGQLNVLGDGAARTHGAKMRAVHGK
VDGARFANPQGRRLFGQRDLIDAALLDRAQRAFEDHAAIGSGDPHPGRADSNDLERRFEVFDDLRQQRLD
RALGGAQLYFGQFGGLEVAHGARVQRCDRRIAGHQHRNIQRLRAIKPIQRLDRGGRHRGFQRATGAIQRI
EIGQHQRRLFDRRHLHLLHFFQNRPAAITDAADQRGQHQDRADGTRFDLRQKGVAARCKGCVGRDEGIVA
DRTTLRWDTGFLDARGLGRHAMRHLEPAFGAELGETVIRVHAQIAGIRTDIPGDETGCVKGGWVTIFDGG
DIVGLDPKLALHIKQRLAHGGAFAPHGIAQTQFEIVEAARLLLFYVCRLALRPAPDHPAAPS
>gi|56697441|ref|YP_167809.1| 5-aminolevulinate synthase [Ruegeria pomeroyi DSS-3]
MDYSVKLDAAIQKLHDEGRYRTFIDIERRKGHFPHAVWTRPDGSEKEITVWCGNDYLGMGQNPVVLDAMQ
EALVAAGAGSGGTRNISGTTVYHKRLEAELADLHGKEAALLFTSAYIANDATLSTLPKLFPGLIIYSDAL
NHASMIEGVRRNGGAKRIFRHNDVAHLRELLAADDPAAPKLIVFESVYSMDGDFGPIADICDLADEFGAL
TYIDEVHAVGMYGPRGGGVTERDNLAHRIDIINGTLAKAYGVMGGYIAASAKMCDAIRSYAPGFIFTTSL
PPAVAAGAAASVAYLKGAQELRDQHQTQARILKLRLKGLGLPLIDHGSHIVPVIVGDPVHTKKLSDMLLE
DFGIYVQPINFPTVPRGTERLRFTPSPVHGPKEVDKLVHAMDALWSHCALNRAELAG
>gi|56697442|ref|YP_167810.1| hypothetical protein SPO2597 [Ruegeria pomeroyi DSS-3]
MSLDDVLSRIDADLPAAIERLMELLRIPSISTDPAYAEACDQAADWLVADLAGIGIAAEKRPTPGRPMVV
GHVEADHDDAPHVLFYGHYDVQPVDPLNLWTSPPFEPQLEDTPNGRVIRGRGSSDDKGQLMTFVEACRAW
KAVHGTLPCRITFFFEGEEESGSPSLVPFLQANAEELKADIALVCDTSMVSRGVPSIAAQLRGMLKDEFT
ITGPRIDLHSGHYGGPGLNPLRELSRIVTSFYDQETGRVAVEGFYEGVHEVPAEQLRQWESCGFDESEYL
NSVGYSQAHGEQGYSTLEQQWARPTLEVNGLWGGYNGAGSKTVIPAQAHCKITCRLVGDQDPDKLRVAIR
KHVEAQLSPDAGVIWDNDLEGSKASVMNIARPEMEAARGALSDEWGREAVFTGMGGSIPVVGFFKSVLGL
DSMLVGYANDDDAIHSPNEKYDVESFHKGIRSWARILDALTR
>gi|56697443|ref|YP_167811.1| hypothetical protein SPO2598 [Ruegeria pomeroyi DSS-3]
MRRRLLPVGRAFLYRLGKRAGVFLVKVDSNTAVVTICRDDAYFLTRFVQYYGGLFGRNNLYIISHGDEPL
VRELAQGCNIFPVPAIETSQFTMLHWRTKNHLKNALRQWYKHVLVCDVDEFVVVDPATGMNLRTWLDDAP
GRTVYTAMGLEIVHLRDREKDDIGGGILGPRRHAQVALHYAKPCIVSRPAKIGRGGHYAEYEKLNMPDFL
YMFHMKYCDYGLYVETLNRRNAFIEKQKEVAGDGTVRTNPKWFADGRDDDAVFSAFERRPVVESFDLSHV
REIMYSTWEQRGDGLWHFHRPEYDELYMLPVRFGGADCA
>gi|56697444|ref|YP_167812.1| pirin domain-containing protein [Ruegeria pomeroyi DSS-3]
MSWNPLLDADIPLGDGVDSIETVIVPRARDLGGFEVRRALPAPRRQMVGPFIFFDQMGPVEFLTGQGIDV
RPHPHIGLATVTYLYKGRLHHRDSLGTDQWIEPGAVNWMVAGNGVTHSERTDGPARQAPLSMFGIQTWVA
LPEHLEETDASFEHTPASALPLLEAEGKQVRLVLGDAWGASAPVATTSEMFYADAQLAPGTALPLPDNHE
DRGVYVTQGSVEVAGQSFEAGRMMVFRPGDRLSLKAGAQGARLMLLGGATLGGPRHIWWNFVASSKERID
AAKEAWRAGDWRHGRFRLPPGDDGEFTPLPTR
>gi|56697445|ref|YP_167813.1| RpiR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MPGTSKLVKQRIQDETEQLTRSERQLASILLQDYPMGGLQSITKLAVAAGVSTPTVIRMARKLGFDGFPA
LQDALREEVAAQIKKPISKRDGWVVDEGAEHPLMRFAQVVWANMRHTLERTDTALFDRAAAILADTSRPL
YVVGGRITRSNADYLYNHMQIIRPNVTMLGNSANVWPQYLLDMDQSSVLVIFDIRRYEAHLEKLAQIASE
RGVTVILFTDQWGSPIGRVADLTFNGLVEAPSSWDSTIALQLIVEALIAEVQGARWEESKERIEELEAMF
SSTRLFRSPT
>gi|56697446|ref|YP_167814.1| N-formylglutamate amidohydrolase family protein [Ruegeria pomeroyi DSS-3]
MLHMSSDAESPLLSPVEGPPARVLNARGAGRGVLVCEHASRFIPAALSGLGLSPEAACSHAAWDIGAMDL
AVELAGALDVPLVFSRISRLVYDCNRPPERADAMPAQSEIYTIPGNADLTPAQRAQRADAVYHPFRQLLS
ATLDTRAAPPVLVTLHSFTPVYQGRTRSVELGILHDSDDRAAQLLLTAAQGSGLRAALNEPYSATDGVTH
TLREHAIARGLPNVMIEVRNDLIDTPAGVNRITGLLAPMLAGMIDTLAPSEAEA
>gi|56697447|ref|YP_167815.1| hypothetical protein SPO2604 [Ruegeria pomeroyi DSS-3]
MTALRAYIRIVDRMNRWIGRLVMYGIFVMMAILLWSSFSKVGSDLGFDINPSLWTLEMAQFAMVAYYILG
GPYSIQMGSNVRMDLLYGEWSDRRKAWTDAITVLFLIFYLGVLLYGGYDSLSYSFQYGERSPTAWRPVLW
PIKTIMCAGLFLMLLQALSELAKDILRIRGEHIPREVI
>gi|56697448|ref|YP_167816.1| TRAP dicarboxylate transporter, DctM subunit [Ruegeria pomeroyi DSS-3]
MSYELIAILMFSTMMVMLMTGQRVFGAIGFVAVLASLLLWGDRGGYDIGFSAAMKLMKWYPLLTLPMFIF
MGYVLSESKIADDLYKMFHVWMGGLNGGLAIGTIGLMVLISAMNGLSVAGMAIGATIALPELLKRGYDKK
MVTGVIQAGSSLGILVPPSVVLVLYAMIARQPVGQLWLAGVLPGLMMAAMFILYIAIRCRLNPALGPALS
PEERDVPMGEKLRLLRAGLLPLGIFAAMMVPFVNGWTSLVESSAIGALTAFLAAVFKGRMNRQVFETSVR
STLGISCMFMWIILAALAFGAVFDGLGAVKAIEDLFTERLGLNPWVILILMQLSFIIMGTFLDDTAMLVI
VAPLYVPLVGALGFDLIWYGVLYTITTQIAYMTPPFGYNLFLMRAMAPPEITLRDIYGSILPFVLVMTLA
LAIIMIFPQIALWLPETVYNK
>gi|56697449|ref|YP_167817.1| solute-binding family 7 protein [Ruegeria pomeroyi DSS-3]
MTTRRKFITTAAVGAAAAPLATPALAQSTIKWRMQTYAGPALAAHVIDPAIAMFNKIAGDRMQIELFYAD
QLVPTGELFRAMQRGTIDAVQSDDDSMASPTEVTVFGGYFPFASRYSLDVPVLFNQYGLNEIWDAEYSKV
GVKHISAGAWDPCHFATKDPINSLADLNGKRVFTFPTAGRFLAQFGVVPVTLPWEDIEVAVQTGELDGIA
WSGITEDYTVGWADVTNYFLTNNISGAWAGSFFANMDRWNELPEDLQTLFRVCCDQSHYYRQWWYWGGEA
SLRVNGTKMQLTSIPDAEWAQVEAAAVKFWDEIAAESETKAKVVEIFKKYNADMAKAGRPYRYG
>gi|56697450|ref|YP_167818.1| gamma-glutamylisopropylamide synthetase, putative [Ruegeria pomeroyi DSS-3]
MLTFETLKAQVAAGTVDTVLVCLVDMQGRLMGKRFHAQNFLDSAYEETHCCNYLLATDLEMATPDGYRAT
SWQAGYGDYVMKPDLSTLRPLPWLEGTVMVLCDVLDHHSHEPVPHSPRQVLKAQIARAEALGLTPMMATE
LEFFLFEGTFDEIRKTGYRNLTPISGYNEDYHILQTSKEEHVMRPLRNHLFAAGIPVENTKGEAEAGQEE
LNIRYADALACADHHTIAKHATKEIAHQHGHAASFLPKWHHDRVGSASHVHLSLWRGSEPAFYDKDAPHG
LSELGRQFCAGMIRYAPDYTFFLAPYVNSYKRFMKGTFAPTKTVWSVDNRTAGFRMCAEGTKGVRMECRI
GGSDLNPYLAQAALLAAGLQGIEEKLELAPPTSGDVYDNAEAGEIPRSLRDAVGTLDGSAMLRAAMGDWV
IDHYTRCAQWEQEEFDRVVTDWEIARGFEKA
>gi|56697451|ref|YP_167819.1| aldehyde dehydrogenase, putative [Ruegeria pomeroyi DSS-3]
MAYAPRNWSSVMTRTVQCISPIDGSVYLERPAATREAAMDAAERARAAQAAWAARPLAERVALVLAAVAE
VGKTTDRMAVELAHQMGRPVRYGGEFGGFNERATYMARIAESALAPLVVEDSDAFLRKIEREPFGVVLVV
APWNYPYMTAINTVAPALMAGNTVILKHAAQTLQVGERMAEAFHAAGIPEDVFQNIVLDHDTTAELISRR
KVNFVNFTGSVRGGQAMERAAAGTFIPVSTELGGKDPGYVRADADLDAAVDTLIDGAMFNSGQCCCGIER
IYVHTSLFNAFVDKAVALVNSYKLGNPLDPETTIGPMANVRFAQVARDQIEDAIAKGATAHIERFAQDDG
GAYLTPQILTNVTHDMEIMREETFGPVVGIMPVADDEEAIALMNDCQFGLTASIWTRDTARANEIGRRLE
TGTVFMNRCDYLDPALCWTGCKDTGRGAGLSVLGFHALTRPKSYHLKKA
>gi|56697452|ref|YP_167820.1| alcohol dehydrogenase, iron-containing [Ruegeria pomeroyi DSS-3]
MKLVGNWSYPTAIRFGAGRIAEIAEACKAAGISKPLLVTDKGLAAMEITTRTLDLMEAAGLGRAMFSEVD
PNPTERNVEAGLKVYREGGYDGVIAFGGGSGLDLGKTLAFMAGQTRPLWDFEDIGDWWTRADPAGIHPIV
AVPTTAGTGSEVGRAGVITNSDSHEKKIIFHPLMLPKVVICDPELTVGMPKFITAGTGLDAFAHCVEAYC
SPHYHPMSQGIALEGMRLVKEYLPRAYADGSDLEARAHMMSAAAMGATAFQKGLGAIHALSHPIGAHHHT
HHGTTNAVCMPAVLQFNRPAVEGVLAQAAAYLGIAGGFDGFAAYVDELNTSLGIPKTLTDLGVKDPNLDV
LVRDALNDPSTGGNPVTMTAENTRPLLESLF
>gi|56697453|ref|YP_167821.1| hypothetical protein SPO2610 [Ruegeria pomeroyi DSS-3]
MMYMIPPESAQSARAPLRIRHRSSSMKLRVAAAVLAVGLAPANLSAQSLVGANVDINHYQFTSKSKGARQ
ALQGSFELGLGSSVSTQLDVGYYKFDQIGGSGRSATLHGIYQFGYGGAVGGFWGTEDGGGIDRNFYGLEA
VYDFSAIRLEGYFSRGRVQGANATLLGGKISSDVGSGPLSLNASVDFMDNKSGANMTRMAIGADYGLGSG
VNLYGEIGTGNARVANFSNNDAFVGVGLRFDLGERPGTTFGRRALLDRLPGL
>gi|56697454|ref|YP_167822.1| DNA-binding protein HU, putative [Ruegeria pomeroyi DSS-3]
MRKRELIDLVVARSDVKKKFVKPAVEAMLAILGEAISQERDLNLQPLGKLKVNRSADKGNGQVIICKLRR
STQAEEEVEKLDADPLAEAAE
>gi|56697455|ref|YP_167823.1| ATP-dependent protease La [Ruegeria pomeroyi DSS-3]
MQEPLNASYPVLPLRDIVVFPHMIVPLFVGREKSVRALEEVMQEDKQILLSSQVDPGIDDPDSDGIYRTG
VLANVLQLLKLPDGTVKVLVEGQARVKITGFLENDVFFEARAEYLTEIPGDVTTTQALIRTVGDEFERYA
KVRKNIPEEALAAVGETTEPAKLADLVAGHLGIEVGQKQDLLETLSVSERLEKVYGLMQGEMSVLQVEKK
IKTRVKSQMEKTQREYYLNEQMKAIQRELGDGEEGAGEIAELEDKIAATKLSKEAREKAEAELKKLKNMS
PMSAEATVVRNYLDWLLSIPWGVKSRVKKDLGRAEGVLDADHYGLEKVKERIVEYLAVQQRSAKLKGPIL
CLVGPPGVGKTSLGKSVARATGREFIRISLGGVRDESEIRGHRRTYIGSMPGKIIQALKKAKTTNPLILL
DEIDKMGQDFRGDPASAMLEVLDPEQNNTFMDHYLEVEYDLSNVMFLTTSNSYNMPGPLLDRMEIIPLAG
YTEVEKREIAKRHLLPKQTKNHGLRAKEFELSDGALTDIIRYYTREAGVRNLEREVAKICRKALTKILKK
EAEKVSVTSENLEDFLGVRRFKFGLAEKDDQIGVVTGLAWTSVGGDLLSIEALRLPGKGRMKTTGKLGEV
MKESIDAAASYVRSIAPAIGVKPPRLDRWDIHVHVPEGATPKDGPSAGIAMVTSIVSVLTQTPVRKDIAM
TGEVTLRGNVLAIGGLKEKLLAALRGGVKTVLIPAENEKDLPEIPDNVKEGLTIIPVAHVSEVLKQALVR
QPEAIEWDEAAEEEAAAAKSALPGGDGASATAH
>gi|56697456|ref|YP_167824.1| hypothetical protein SPO2614 [Ruegeria pomeroyi DSS-3]
MAAQRGGQRRKVGFAGLETGSDTLLAALRIDLKTKEFAVKRLMSAVMCIWGGLAGAAELDGCALGAQDYP
EIVAPLLEGAWRVHNGPGLMMMKMGANEMKMPIPPMGHEMMAMLYRDGAVFANMAQFGEAEVRLADADNQ
IVPVPVDGAQRDLDFDRLGLAPDCGTDGMLRLEFEQERIDEDGTHLWLHVQLALLDEDRLGGVLTVQGRG
SDGAETHARRLVSFLRH
>gi|56697457|ref|YP_167825.1| Oye family NADH-dependent flavin oxidoreductase [Ruegeria pomeroyi DSS-3]
MSETLFTPLKAGNIALKNRVVMAPLTRNRADDTAGTVFDRHAEYYAQRASAGLLITEGAQISAEGKGYIQ
TPGIHTPEQVAAWRKVTDAVHARGGKIVIQLWHVGRISHSSLLPDGQAPVSPSAIAAEAKTFTHAGFETT
STPRALETDEIARVLADYAHAAQSAREAGFDGVEIHAANGYLVEQFLKDGANQRQDDYGGSVENRARFLF
QVLEAVLTVWEPGNVGIRLSPFTTVNGISESDPVATYTPVIKRLDSYGLAYLHMIEGQTGGARDGAFDDL
RQLWTGAYMGNNGYDRASALERTETGAVDLVAFGRPYIANPDLVERLAADAPLNMGDTATYYGGGDEGYT
DYPVLQTA
>gi|56697458|ref|YP_167826.1| queuine tRNA-ribosyltransferase [Ruegeria pomeroyi DSS-3]
MSERFSFDLHASDGKARTGVIHTPRGGVRTPAFMPVGTAATVKAMMPESVRATGADILLGNTYHLMLRPT
AERIDRLGGLHRFMNWDRPILTDSGGFQVMSLAGLRKLTEKGVTFKSHIDGSKHELTPERSMEIQRLLGS
DIVMCFDECPALPADRDRIAESMRLSMRWAERSREAFGDRPGHALFGIMQGGLEQDLREESAQALRSVGF
DGYAVGGLAVGEGQAAMFDCLDYAPGFLPEDKPRYLMGVGKPDDIVGAVKRGIDMMDCVLPSRSGRTGQV
FTRHGVLNIKNARHMDDPRPLDEACTCPACRNYSRAYLHHVFRSQEIISSMLLTWHNLHYFQEIMQGMRE
AIAGGTFEAWEAAFHAGRAQGDIEPL
>gi|56697459|ref|YP_167827.1| SPFH domain-containing protein/band 7 family protein [Ruegeria pomeroyi DSS-3]
MTEDQIIGLLSQNIIYLAAAIFIIVVILKGIRIVPQSEKFVVERFGRLHAVLGPGINFIVPFLDVVRHKI
SILERQLPTASQDAITKDNVLVQVDTSVFYRITEPEKTVYRIRDVDGAISTTVAGIVRAEIGKMDLDEVQ
SNRAQLISTIKSSVEDAVDDWGIEVTRAEILDVNLDQATRDAMLQQLNAERERRAQVTKAEGAKRAVELN
ADAELYAAEQTAKARRIEAEAEAYATEVVARAIAAHGLEAAQYQVALKQVEALNALGNGAGKQTIILPAN
ALEAFGDAFKLLKGGK
>gi|56697460|ref|YP_167828.1| hypothetical protein SPO2618 [Ruegeria pomeroyi DSS-3]
MSDALWSVWWLWIAGALALGVVEMLLPGFIFLGFAIGAALTGLMLLAVTPSLPVLLLVFAALSLAAWLLL
RRSFALPTGQVKTFKDDING
>gi|56697461|ref|YP_167829.1| hypothetical protein SPO2619 [Ruegeria pomeroyi DSS-3]
MTHATEPMEGAPLIAPSSVDHDLYEPVVEACRTVYDPEIPVNIFELGLIYTVEISDENEVRVIMTLTAPG
CPVAGEMPGWVAAAVESVPGVKSVEVEMTWDPPWGMEMMSDEARLELGFM
>gi|56697462|ref|YP_167830.1| iron-sulfur cluster assembly accessory protein [Ruegeria pomeroyi DSS-3]
MEIFMFGIPGKQAVTMTPRAATQIARLMDKGGHTGLRIGVKKGGCAGMEYTMDYVDQADPHDEVVEQDGA
RILIAPMAQMFLFGTEIDYEVSLLESGFKFKNPNVVDACGCGESIKFDESLASR
>gi|56697463|ref|YP_167831.1| triosephosphate isomerase [Ruegeria pomeroyi DSS-3]
MRRKLAAGNWKMNGTGAALDALEAIAGAHSAAAVDLLICPPATLLYRAAQVAEGSRVRIGGQDCHAVTAG
AHTGDISAMMLADAGASAVILGHSERRADHGETDAQVCDKARAALEAGLIAIICIGETLAQREAGQTLDV
VCAQLAGSVPDGIDGTRVVVAYEPVWAIGTGLVPTLEQIAEVHDTLRQQLIGRFGSETAEAIRLLYGGSV
KPGNAAEIFAVSNVDGALVGGASLTAADFSPIVSALEQAAG
>gi|56697464|ref|YP_167832.1| acetyltransferase [Ruegeria pomeroyi DSS-3]
MPLVRAGWSGDHARMTSQMLVVRQASHQDLPQLFDLYRHLNPEDVPPPAPDVARDILNQLCRYEGSAIFL
GEVTGTLVASCTLIVIPNLMRGGSPYGLIENVVTHGDFRKRGFGKALLDHASAAAWQAGCYKLMLLTGSS
QPEVLRFYQGAGFEQSKTGFQKRRVPPRPEG
>gi|56697465|ref|YP_167833.1| amino acid transporter LysE [Ruegeria pomeroyi DSS-3]
MSWALWTTFAMVSAVNIVTPGPANLNTLRRALQLGARRVVPTILGNALGLALGGTLCAAGITAFAMASPL
WWQAFRWIGIAYLVWLGVKLLVKREKILSAEADGPAVRAHALFAEAFLLAASNPKALLFYIALFPQVLDP
AQPLAPQAALLIASYCALSILSLGTYSALAQLLRRSVMTQARYDRFRQVSGVVLIGFALKLMLGA
>gi|56697466|ref|YP_167834.1| AsnC family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MTFTEEPALDPLDRAILAALVQDARSGWSELAAQTGVSAPTIRERVRRLIDSGVIRGFTAEISPQALGYR
LEAVVRFRPLPGKRHILEQRIQETDRIVQCDKVTGEDGFVARILLRDIGELDPLLETFARMATTHTSIVK
SSPVRMRPPAF
>gi|56697467|ref|YP_167835.1| hypothetical protein SPO2625 [Ruegeria pomeroyi DSS-3]
MTHKGIAMTGASEPGRLGQLYATHAARWHASITRLGYPDAYARLTRCDLQRRAAPARQVLDAGCGTGAFA
EAYLSQSRGAKPALTALDPSPEMLDQARSRLAPWQPDCRQGQLEDLTRLSARFDTVLCAHVVEHVADLGA
ALEQLRAALLPGGSLLLSVSKPHWCTALLRWRWGHRAYRPEQVCAALAHHGFGQIEPVRYVKGPPSRTSC
GYRAVRK
>gi|56697468|ref|YP_167836.1| TRAP transporter, DctM subunit [Ruegeria pomeroyi DSS-3]
MDVVLLFVMVVGFLLIGVPIAVALGFSSVLFLLIFSDSSLASVAQTLFQAFEGHFTLLAIPFFILASSFM
TTGGVAQRIIRFAIACVGHLRGGLAISGVFACMMFAALSGSSPATVVAIGSIVIAAMKQAGYTKEFAAGV
ICNAGTLGILIPPSIVMVVYAASVEVSVGRMFLAGVIPGILAGVMLMVAIYVMATIKGMPKGDWAGWGEI
GDSFRDALWGLMLIVVIMVGIYGIPGITKAIFTPTEAAAVASVYAFLVASFVYRDMGPLAAENNGGVRKS
LLTRPLALVGAFFHKDTRNTLFEAGKLTVTLMFVIANALILKHVLTDEQVPQHVANAMLSAGLGPITFLI
VVNVILLIGGQFMEPSGLLVIVAPLVFPIAIELGIDPIHLGIIMVVNMEIGMITPPVGLNLFVTSGVAGM
PMMSVVRAALPFLAVLFVFLILVTYVPWLSTVLPNALMGPEIIIK
>gi|56697469|ref|YP_167837.1| TRAP transporter, DctQ subunit [Ruegeria pomeroyi DSS-3]
MHPHKSESWVDRIEETIIAVLLGCMTVITFANVVARYVFNHNILWALELTVFMFGWLVLLGASYAVKKNA
HLGVDAVINMLSPKGRSVMAMISITVCILFTLLLLKGSWDYWSNFANLPQTTGRVFPTGFEDEFRPKGWY
ETNDIPHPAILGWMETVFNEGDEYEKLPRLVPYLVLPLSMGLLLWRFLQVARSIWTGGQDRMIASHEAED
ELEEVREQLGKDD
>gi|56697470|ref|YP_167838.1| TRAP transporter solute receptor DctP family protein [Ruegeria pomeroyi DSS-3]
MKFLTTAATALALTVTAGAAIAACDDGEIVVKFAHVTNTDKHPKGIAASLLAERVNAEMNGTMCMEVYPN
STLYNDDKVLEAMLQGDVQLAAPSLSKFEKFTKKFRLFDLPFMFKNVDAVDAFQTSDAGQALLDSMQKRG
LQGLAYWHNGMKQMSASKPLLVPSDANGLKFRVQSSDVLVAQMEAMGASPQKMAFSEVYGALQQGVVDGQ
ENTWSNIYGQKFFEVQDGTTETNHGIIDYLVVTSVDWLDSLDAGVRDQFLTILTEVTNARNAESTKVNNE
ARDAILAAGGVVRQLTAEQRQEWVDTMKPVWDKFVDDVGQESIDAAQAINASM
>gi|56697471|ref|YP_167839.1| C4-dicarboxylate transport transcriptional regulatory protein [Ruegeria pomeroyi DSS-3]
MIGKVLLVDDDAAVREALGQTLDLADYAVQTAGSFVAAKDHITATFDGVIVSDIRMPGRDGFHLLSYAQD
IDPDLPVILLTGEGDIPMAVRAMGDGAFDFLEKPCAAADLLAVIARAMAARAQVLETRALKRQLDRGDPA
ARMLFGTSARAEALRERVRGVAPTGAEVLVTGPAGSGISKVAEVIHLMSPRALGGFVKRAAAGLDAAELS
RLSSETAQGSLFLDEVSALSQAAQYALLEEMEQAGGARLLAGSTADLAALVGKGSFNADLFYRLEGMQVR
IPALAERPEDIPVIFRHYVMQAAEQAGIATPAVTPDHLAALMAQDWPGNARSLMSAAMRFVLGMPEEVSE
AAELGLAEQMARVERTLLIAALGRHNGRAVEAAQALKLPRKTFYDKLARYGIKPEAYRR
>gi|56697472|ref|YP_167840.1| C4-dicarboxylate transport sensor protein [Ruegeria pomeroyi DSS-3]
MRRWWVISGFLAAVALLAAGVWTYGYGQALSQLARRAEADLELASDRLGTQLQVYQELAVLMAEHPALKG
LEQPVRRPAAQALLLEVADKTAALDVLFAAPDGRVLASAHGAAGKDVARWPAFRRAMHGALGSEHGLLPG
AFRRAYAYAAPSFGADGRVMGALIVIADVADIEQTWRGNTPAVFFTDDRGEVFVSNRSELLFWTRPAGKA
GLAPAKGPAHEFAAYRVGGHEIWRLDWGPYLPARALHMTRPLPVIGMTGEVLVDVAPARRIAGLQAAAVA
AICLAFGAMLFLATERRRTLSEANQVLESRVAQRTRALTAANSALRREVAERQEAEAALKRAQAELVQAG
KLSALGQMSAGISHELNQPLMAIRQFADNGTAFLARGKTDKARENLGRISDMAARMARIIKNLRAFARNE
SEPVGRVDLVQVIEAAVELTEARLREHAVTLDWNPGTVGPVSARGGEVRLTQVFVNLITNAADAMMDQDR
RHIRIAIETGPRLLVRVQDCGPGLKEPEKVFEPFYSTKAVGSSEGMGLGLSISYGLVQSFGGNIRGSNTG
SGAEFTVELDPWQEEAAA
>gi|56697473|ref|YP_167841.1| AsnC family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MSVRIDETDRKILVELQRDASQSLDEIASRVGSSKTPVWNRIRKLKGAGVIGQQTVILDPEALGFEACFF
VLIRTSEHEAEWQQQFLKALQDRPEVQEAHRLAGDIDYILKVRVKNARAYDAFYQALISEVRVHNVTALL
SMEEIKSTTVLPL
>gi|56697474|ref|YP_167842.1| uroporphyrin-III C-methyltransferase [Ruegeria pomeroyi DSS-3]
MTASRIYPGSGHVDFVGAGPGDPDLLTVAALKAFAAADVVLHDRLISDAVLALAGETATLVDVGKAGFGP
SWKQGDIDALLVDHASRGARVVRLKSGDPTVFGRLDEEIDAVSAAGISWRIVPGITAASAAVAGIGQSLT
RRGRNSAVRFLTGHDMQGFADHDWTALARPGAVAAIYMGKKSARFVQGRLIMHGADRATPVTLVENASRP
DQRVLATTLDRLPADLAAAEMDGPALTFLGLAPRDAATALSTINKELA
>gi|56697475|ref|YP_167843.1| hypothetical protein SPO2633 [Ruegeria pomeroyi DSS-3]
MARAFTPKVVTANDLLDGDVIYQTADDRWSRVLSEAELITDEAHAQLRLLDASRQAARVVGAYLADARPG
PNGPEPVHFREDFRRTGPSNYAHGKQETSPQPRT
>gi|56697476|ref|YP_167844.1| sulfite reductase, putative [Ruegeria pomeroyi DSS-3]
MYRYSEFDTAFLAERNAQFRAQVERRIDGSLTEDEFKPLRLMNGLYLQLHAYMLRVAIPYGTLNAAQMRQ
LALLAEKWDKGYGHFTTRQNIQYNWPKLRDVPDMLDALAEVGLHAIQTSGNTIRNVTADHFAGAAADEVA
DPRPYAELLRQWSTDHPEFQFMPRKFKIAITGSANDRAVIKAHDIGLQLVVRDGVLGARVIVGGGLGRTP
MIGQELSPFVAFDDLLAYLEATVSVWNQIGRRDNKYKARIKITVFEHGIEAIRARVNERFVKVRGRFKGA
DMALLDEIKGHFAPPSWRTSSLAPFEAAYAKDPVFRSWVDTNIAAHKQADHAIVTISLKAHGATPGDATA
EQMRVMADLAERYGYDELRISHEQNVILPHVHKSDLPAIHAELAANGLGTANIGLISDIIACPGMDYCAL
ATARSIPVAQEIATRFEELKLEHEIGALKIKISGCINACGHHHVGHIGILGLDRAGVENYQITLGGDATE
TAAIGERTGPGFAYDQIVPAVERIVETYLDQRRDREESFIETYRRVGMAPFKAALYPEARADAA
>gi|56697477|ref|YP_167845.1| phosphoadenosine phosphosulfate reductase [Ruegeria pomeroyi DSS-3]
MPLDEIQTELGRDRSVLTQKVAALNARYKHHSATDVMHGALREAGDIALVSSFGAESVVLLHMAAVIDRQ
VPVLFIDTQMLFAETLVYQQEVSERLGLKNVQVIRAAEDDVARDDPYGALRLRDTDACCTLRKTIPLQRA
LSGYDGWITGRKRFQAGTRAALDFFEVEDGTGRIKVNPLAHWAPEDVRAYMEENRLPRHPLVAQGYPSIG
CAPCTSPVAPGEDPRAGRWRNQNKEECGIHFVDGKMVRNGDKT
>gi|56697478|ref|YP_167846.1| hypothetical protein SPO2636 [Ruegeria pomeroyi DSS-3]
MTVIVTDQGFQPEDWTDGFVALGDVANDVVALDVPADADPDTLATRLDRVRMVRVDFPSFADGRGFTIAR
TLRLHGYTGRLRAKGHVLADQYAMARRAGFDEVEIDAALADRQPEAQWLARADWQAHDYQARLRG
>gi|56697479|ref|YP_167847.1| ferredoxin--NADP reductase [Ruegeria pomeroyi DSS-3]
MTEMRPVTEAAAIKAPTLPDSQTVTQVKHWTDRLFSFRVTRPASLRFRSGEFVMIGLLGDNGKPLLRAYS
IASPAWDEELEFYSIKVQDGPLTSKLQHIQPGDEIILRPKPVGTLVHDALLPGKRIWFFATGTGFAPFAS
LLREPQTYEDYDEVIITHTCREVAELEYGRQLIEEIRQDELLAELMGEGFADKIRYYPTTTREESPRMGR
ITELLKDGTVFADLGIDGGIKAETDRAMVCGSLAFNHDIKAILEGFGLTEGANSDPREFVIEKAFVG
>gi|56697480|ref|YP_167848.1| translation initiation factor IF-3 [Ruegeria pomeroyi DSS-3]
MARRPHNAPPQRDTGPRVNDKIRASEIRLIGADGENVGVVHPAKAMAMAEEAGLDLVEISPNATPPVCKI
MDFGKYKYEQQKRESEARKKQKIIEVKEVKFRPNTDTHDYEVKMRNVYKFLENGDKVKVTLRFRGREMAH
QNLGRELLERVAEDVKEMGKIENMPKMEGRQMIMMIGPLPQK
>gi|56697481|ref|YP_167849.1| molybdopterin biosynthesis protein [Ruegeria pomeroyi DSS-3]
MRFGPVPVAGADGAILAHSVQAGPKKLRKGLRLEPGHLEQLAQAGIAEVIVARLDPGDCHEDDAARQLAA
ALAPDPGAAGLRVSAPFTGRVNLLAEGPGVVCLDVAAIERFNLVHPMITVATVPQHQQMGPGGMVATIKV
ISYAVPQADVTRAVEAARGAIRLASPVLRSAGLVVTEIPGGPPNDKGIAAIRGRVEALGLTLDDLRLVPH
RGGDLAAAISEISGDMVLILTGSATSDPEDVAPAALRAAGGAVERFGMPVDPGNLLFLGALGARPVIGLP
GCARSPALNGADWVLSRVACGVPVTGRDIAAMGVGGLLKEIPTRPQPRAGRAGASESGPKTDSQTA
>gi|56697482|ref|YP_167850.1| XdhC/CoxI family protein [Ruegeria pomeroyi DSS-3]
MEASMERFDNAPETALAWHRQGLGAALATVVETWGSAPRRVGAQLVIGGDGRIEGSVSGGCVEGAVIVEA
LEALEEGQARLLEFGVSDEDAFAVGLACGGTIRVLVEPVGQVLSEVMLAELVAARASRQALAYVVDTARG
TRALVRDAYPERMRMDRSGFDEDGRTFVAVHNPPLRLIVVGAVHIAQALVPMARIAGYDPVVIDPREAFA
SDARFPGETILHDWPDEAVAKLGLDARTALVLLTHDPKLDDPALEAALAADVFYIGALGSTRTHAKRVAR
MQEAGFTEAQIGRIHGPVGLDIGAAGPAEIAVAILAQMTAVLRGRA
>gi|56697483|ref|YP_167851.1| hypothetical protein SPO2641 [Ruegeria pomeroyi DSS-3]
MTSIILAIVIGAAFGAVLDRVGAANPNVINRMLNLTDLRLAKAILLAIGTGSALMFGGQMLGLVDVGHMS
VKTAYLGVFLGGLMLGAGWAAAGYCPGTGVVAAASGRKDALFFIAGGLLGAAAYMVTYPAWKASGLLDKI
AGGAVTLGSVPGAKYEGLTTLPGDILGLVLGLGFVALAFALPDRLMGEGVPRTAPAE
>gi|56697484|ref|YP_167852.1| YeeE/YedE family protein [Ruegeria pomeroyi DSS-3]
MQNVTLQEGRPMTLNWKIGGLLLGLVFFAAVLLVKPIGVSTQFVILDGILADAVMTDLVTKTEEGYTSTN
AYLAKSGGKYAKSVANPLNYSFVFVLAMMLGGFLSLMARGGLDRAERAIPALWRANFGDSAVKRYAVAFL
GGFIVLYGARLAGGCTSGHMMSGMMQTALSGYIFAAGAFAAAIPVSILMFRKEV
>gi|56697485|ref|YP_167853.1| hypothetical protein SPO2643 [Ruegeria pomeroyi DSS-3]
MSALRDSDRAFWTAYPYATGAGGALDPDTARQGDDPALALAGHVIAVNQPFLRQHRVWPRLQRCQTWLLP
GSDQVNARAIQAGARRAVYLHGGLLRGLWNALHMLLGSSRFLADRFGWQVADLRPPPPAPGGVLLFPEVR
GGNGTDPLSYLKEAYGRAVEFIYFHEIAHHGRDHIARLRAAGGQGFVDEGLAMAAGAGAKGELVQLLEFD
ADLSAVDMCLNATGFAGWTKGEAPRFADPDHMTSEFYLHLSGIVTLFMLLDRAAPDAPARYDRGHPPALH
RAIRLSVALSDTVQSATGLSRAQVDPFLDQAWSEVVALAGRLGYPPGLWTGRQDQIARIGLLDKIADRAN
ALSREIDAELSR
>gi|56697486|ref|YP_167854.1| VWA domain CoxE-like family protein [Ruegeria pomeroyi DSS-3]
MPEYAPLALPENPRLAHNITHFARALRKAGLPIGPGRVIDAVRAVEAAGFTEKRDFYWTLHACFVNRPEH
RAVFAQVFRLYWRDPRYLEHMMSMMLPAIRGVQEERSAQAAEKRAAEALLDGIQPELPEPEPEKEGEETL
IEVDASLTMSAEEKLKTLDFEQMSTEEVARAKRMLARLTLPVKPIPSRRRQAAQLGPRIDRARTLRAAMR
RGGELRDIAKAQPRLRWPNLIVLCDISGSMSQYSRMVLHFLHAVSNAKGQGWAKVHAFTFGTRLTNVTRH
LRQRDVDAALKAAGAEAQDWEGGTRIGACLHAFNRDWSRRVMGQGAVVLLITDGLDRDDPDALAAEMQRL
HLSCRRLIWLNPLLRWSEFAPKARGIRAMLPHVDSFRAGHSIASLEELAEVISQADDMGEKARLMAALAG
>gi|56697487|ref|YP_167855.1| S2 family protease [Ruegeria pomeroyi DSS-3]
MLYWHHSSRPKSVFHPAFKGKTMSDLISTHALLAPEAQHPQRSDLCIERVGDTAASAGFNPGLERAADLT
ETSVSGFAEAREASAAGMADDELDALMNPTGFQTEVVIGFDDRIRISPANRWPWAVHGHMEMTFPDGRRF
IGSGTMINRHHVLTAGHCVFSRDNGGWATEVIFQAARDDGALPFGTSSAVRLLSVAGWTNGENPEFDMGM
LILGDELGERTGWHGIVTGPEAMLSNHRVNVSGYPGDKGGRTLWTHKDVIKSVTDTKVFYDIDTAGGQSG
SGVWSVWDGHAGEKVCAIHTTGSQSGNGAVRINRDKFDRIIGWMARH
>gi|56697488|ref|YP_167856.1| hypothetical protein SPO2646 [Ruegeria pomeroyi DSS-3]
MTQAPSIDAVQQMLGEQGYVCGRALATVVFLSLRLGRPLFLEGEAGVGKTEIAKAIAAALGRRLIRLQCY
EGLDAASAVYDWNFAAQMVAIRTAEAAGGADRGALQTELFSDEFLIERPLLQAMRPDPAGAPVLLIDELD
RTDEPFEAFLLEALSDFQVTIPELGTVKAPEPPIVILTSNRTREVHDALKRRCLYHWVDYPDFDREIEIL
HARAPEAAETLSRQVVAFVQTLRTEDLFKKPGVAETIDWAKCLLALDVIDLSPEVIADTLGAILKYQDDI
QKLQGSEAKRILDQAKASLEPA
>gi|56697489|ref|YP_167857.1| hypothetical protein SPO2647 [Ruegeria pomeroyi DSS-3]
MRHKDCDDSLSLRGLLTLVRANVMTLETIGGRQNRSQTGDGSNNFQDGPGGQGGPMRITAVTCVKNEGPF
LLEWIAFNRLIGVTDFLFYSNDCSDGTDRLLDALAMAGPDLADLCGNVVHLPNPAEGRNYQMEALKDAAH
RTVVQAADWVWIADVDEFLNIHVGDNTIPALIAACGDPTAISVHFQFFANDGIDGFEDRPVIAQFTRSHN
PDIWCGETAIEVKSLTRRDFPLQYFGAHRPFFSKKQGKKKGLAWADGSGRQVPHKFLVAANPRRIRKFPA
KGARNFATLNHYALRSLDSYLVKNDRGDVNRENRAFDDSYWRERNDPAWQETSIARYLPALEDALERIKA
HREIGALHDEAVRLHREKCAALLNQPAYREMQAQLRAASTLPPDEEALLQEMGML
>gi|56697490|ref|YP_167858.1| hypothetical protein SPO2648 [Ruegeria pomeroyi DSS-3]
MMARLRVINLGLPKSGTTTLGVALRASGLKVADWKVRKFQSANPEVARHFLGDLMYRGYFETGDPLHLLD
EFDAMTEINVVGGELNRWPQTDWGLLEAIIERHPGAKFILSYRDPEAQANSMIRWTNLGRKRLRIFDVPG
LPGKFGRAPADIVRWIDGHNRFCRRVFAGDPRFLEYDILDPEAPARIGAFLGLPIRWWGTVNENPETGAE
TVTETVSEPDAAPSEDQTS
>gi|56697491|ref|YP_167859.1| hypothetical protein SPO2649 [Ruegeria pomeroyi DSS-3]
MRIVLHIGPETTGADRIQSILSDKREGLKSQGVLFARSPGNRNHMRLYMSVSDPEHVDPFRYNRGYAAPE
AQEQLREAMIEGLRAEIAASRPDTLILSAAQMASSFHRPSEVARLRDLLAPLSNDIQVVATVSDPARMLL
DHYAAQVSEGRATPLEQELNLIGAPGWWQAATAAMPAIDPIRGIFEETQGPAFWLDLVGLVALWEAGFGA
GAVRLFSHDPADLASPGATELVREMFGITRGIGRAEPALPAPLPSAATLSRQRRFNEILLRYMASGDKVV
SRQLWRSLLDELVVDGTPPTPDGLAAISTRFEAANSALMLDHPGMNEDQFTPPPAADWVEADPERGFRAS
QYLLAARWRIDKLSAEQLALRAEQLAVAPAETAPAPPAAPQVEAESDDSLSETARRLMPPLAVQNFEKLR
KSSYAPHNRIGAVDEEQLAASFSPAKPRKLAKGKTGNLIVGCMKNEAPYILEWVAYHRAIGVDNFLIYTN
DCSDGTSEILDRLQALGVLQHRNNDNWKGNSPQQHALNQALKEPVLKNSDWIIHIDVDEFINIRCGNGTL
DDFFAAAPDATNVAMTWRLFGHNGVTELKDEFVIDQFDACAPKYCPKPHTVWGFKTMFRNIGAYEKISCH
RPNKLDEAFETKVKWVNGSGQDMTGEALKSGWRNSKKSIGYDLLQLNHYALRSAESFLVKRQRGRALHVD
RSIGLNYWIRMDWNDHRDVTIKRNLPRMRAEYDLLMQDDTLRDLHAAGLDWHRAKAAELHGMPEFEDLYR
QALEVRLSGTERVAYALALDVES
>gi|56697492|ref|YP_167860.1| FkbM family methyltransferase [Ruegeria pomeroyi DSS-3]
MADGPQTNEGKFLTSRGMRFPLDTDILPKRVRLLLRTDGYEAKEARAAYRMMKEGDVVMELGAGIGFMST
LIASKTRAAEVHCFEANPRLIPYIEAVHAANGVTNAHIHHALLGDKPGRRTFYQRSSILDSSLAPLPEDD
ETVEKVQVPVRGAAKAMADIRPSVLVCDIEGAEVDLLPQLDLSGLRAVLIELHPQWVGKEGVAQVFEAMR
RAGLVFFPRWSQGKVAVFRSDW
>gi|56697493|ref|YP_167861.1| glycosyl transferase, group 2 family protein [Ruegeria pomeroyi DSS-3]
MRSLAVLTVRNEAAFLLEWLAHHQALGFTDFLIFSNDCQDGTDQMLDRLAEMGQLVHLRNDGPYDKGGIQ
FTALKAAARHKLVKQADWILPLDVDEFVNIHVGDGSLSALYEALPHATAITLTWRLFGNSDTPRYVDAPI
TEQFTRCAPEIMYWPWRASMFKTLYRNDGTYRKLGVHRPRSPVPERLETSHWYDGHGRPLEEMFRENRIF
SSYGRPNYGLVQLNHYPLGSMESFVLKADRGRAVHSEHMLDVDYWVERNFNTDSDDSILRYGERSAPLRQ
ALLADRKLARLHQRAVEWRQKRFTELMKQEPYRALFARLLMTPPSRLISAASARTLVGFANLGRMETADD
GPENDPKPA
>gi|56697494|ref|YP_167862.1| hypothetical protein SPO2652 [Ruegeria pomeroyi DSS-3]
MQDAKTSIDESIAGFRREVWKQKLLEQAEAEGMAQELGARHFATFIDRDATLLVTFETAEGIRSISETHQ
PFGFELVKSKGWSHLCIISDGDTWFRDPKVYGFFDRLIDDGFFEDFDQVVFYGAGPCGYAAAAFSVAAPG
ATVVAVQPQATLDARMTEWDDRFTEMRRVSFTDRYGYAPDMLDAADHAFVLYDPAESLDAMHATLFARDN
VTRLRMRYMGAELQARLLDMNLLYRILLMAGTGKLNAKSFFQIYRARRSYPRYLKGLVAVLDRQNRPYLN
MVLCRNVIARMPARRFRRRLEELEEDARVGKFAPPPGQA
>gi|56697495|ref|YP_167863.1| dihydroorotase [Ruegeria pomeroyi DSS-3]
MTQSLTIRRPDDWHLHLRDGAMLAAVLPETARHFARAIVMPNLVPPVVTGAQAAAYRDRILATLPKGMNF
EPLMTLYLTEQTDPDDLAAAHTSGLITSVKLYPAGATTNSASGVKDFDKVRPVLERMAEIGCPLCVHGEV
TDREIDIFDREAVFIDRVLDPIRRATPGLRVIMEHITTKDGADYVAANPEGLGATITVQHLMFDRNDMLV
GGMRPHYYCLPILKRRHHREALVAAATSGDARYFLGTDSAPHPTHAKEAECCAAGCFTAPIALSCLAHVF
EEAGALDKLEGFTSLNGPAFYGLPVNADTITLSKADPLDIPKTLPAGEHTVTVFDPGVPLHWRVTR
>gi|56697496|ref|YP_167864.1| orotate phosphoribosyltransferase [Ruegeria pomeroyi DSS-3]
MIPAAYPTREEIARLTARMLLEIGAVNFNTKEPYILASGLPSPSYIDCRKLISFPRIRSTLMDFLTVTVM
RNAGFEAFDNIAGGETAGIPFAALVAERMALPMTYVRKKPKGYGRNARIEGAMSEGQRVLLVEDLTTDGG
SKLSFVDAIRETGASCGHTAVIFYYDIFPETEKTLGDHGVALHYLCTWWDVLAEARAQKAFDEVTLSGVE
AFLKDPRAWQAANKR
>gi|56697497|ref|YP_167865.1| replicative DNA helicase [Ruegeria pomeroyi DSS-3]
MNEITTIGQASAEVQNADTMPHSVEAEQQLLGAILTNNDLYDRVAQIIGPEHFYDPVHARIWEVAAARIA
KNTLASPVTLKSFMAEDAGLAELGGAAYLVNLAGASISAFAVRDYAQMIYDLAIRRELIRLGRDISDKAA
RVDVASEPKEQIVEAEQKLYKLSEQGQTDSGFKSFLKAVTEAVNVTNQAYQRGGGMAGISTGLNDLDKQL
GGLHPSDLIILAGRPSMGKTSLATNIAFNVAKAYKRGQRHDGTEGAIDGGVVGFFSLEMSAEQLAGRVLA
EASEISSHKIRQGDMTEDEFRRFVNAAKDLEACPLFIDDTPALPISQLAARARRLKRTHGLDLLVIDYLQ
LCRGMADNRVNEIAEISMGMKAIAKELNIPVIALSQLSRQVENRDDKRPQLSDLRESGSIEQDADVVMFV
FREEYYKEREKPGDHELDRMEEWKTAMERLHGKAEVIVGKQRHGPIGTVELSFEAQFTRFGNLVKPWQQG
GQIEQY
>gi|56697498|ref|YP_167866.1| LysR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MDTRLLEDALILLEEGNLTAAAARRNVTQPAFSRRIRSLEQWIGTDLLVRGANRVELSPALAKCEPQIRA
LLSQLQQVQGQLKDPEGGADVLHVVTQHSLSVSAIPELIRVANSAGTRWHVRLHTRNQDEAMSMFLRHEV
DVLVGYDYRVLPLAPFDSSVTRYVWRRDAFVPVVGGALRHRLKDGNVLPPDTPRISYPKGSLFGQIVSHY
NKDAALSLDGPVVVESTFSVGIAQLVLSGIGAAWVPHSLIHDQIISGEVVILSPGYGRIPMDIALYARTD
NKRAILFRNALAAPGA
>gi|161598431|ref|YP_167867.2| D-cysteine desulfhydrase [Ruegeria pomeroyi DSS-3]
MERFARIRLGHLPSPLEPLDRLSEALGGPRIWVKRDDCTGLSSGGNKTRKLEFLMASACEAGADTIITQG
AIQSNHARQTAAAAARLGLHCHLLLEDRTGAADLAYTLNGNVLLDRLHGATISRRAGGSDMAAEMERLAA
TLRGKGKRPYVIPGGGSNRVGALGYVNCALELSEQALSMGLDIDALIHATGSCGTQAGLVAGLAGLSWNT
HLLGIGVRAPQERQEAMVFDLACETMDYLGMGIPIVRSGVRANCDHVGPGYGLPTEAMCEAVRMLARLEG
LLLDPVYTGKAMAGLIDLTRQGYFDGMANIVFLHTGGSAALFGYPEIFGLPGYQP
>gi|56697500|ref|YP_167868.1| glutamate/aspartate ABC transporter, periplasmic substrate-binding protein [Ruegeria pomeroyi DSS-3]
MNLLKPILAGAVALGLALPVAAQDRTGTLAKIDASGEIVIGHRESSVPFAYLDENQKPVGYSIDLCMKIV
EAVSAELGKELSIKYVPVNPKTRIALMANGTIDLECGSTTNNLTRQEQVEYLPTTFITGTKLMVRKGSGI
SSVADLDGKAVALAQGTTNERAVKAAIETMGLDVKVLPVRDHAEGMLSLETDRVDVYATDHILLFGLIAK
SKTPDAFEVVGDFLSFDPYALMVRRDDSAFELVGKKALAAVFRSGEIDAIYAKWFDPLGVGQTDLLKAAF
QLNALPE
>gi|56697501|ref|YP_167869.1| glutamate/aspartate ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MNYNWNWGVLFEEEYLGWLISGVGWTFSVALVAWVLALAVGILVGVGRTLPSRPVALLCTTYVEIFRNVP
LLVQLFLWYFVLPEIVPSDMGRWMKRDMPNPEYVTAVVGLGLYTASRVAEQVRAGINAVGGGLTSAAYAN
GLSTAQTYRYVLLPISFRLIVPPMTSEFLTIFKNSSLALTIGLLELTAQSQQIAEYTFQGFEAFTAATVI
YVVIALCATVIAQILERHTKIPGFVGKA
>gi|56697502|ref|YP_167870.1| glutamate/aspartate ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MGDFDLSVIIDNLPFLWQGLQLSLLLTFLAVVGGIVLGTLLALMRLSGILPLSLLSAGYVNLIRSVPLIL
VIFWFYFLVPLALGRPIGGFYSALIAFVMFEAAYYSEIIRAGIQSVRQGQVHAGQATGLNYWQIQRYVVL
PQAFRNMVPILVTQGIILFQDTSLVFVVSLRDFMTVSSIVARTEGRLAEMYVFAALVYFVICFAGSLFVR
RLQKAKTA
>gi|56697503|ref|YP_167871.1| glutamate/aspartate ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MIDIQNISKWYGTFQVLTDCTTSVTKGEVVVVCGPSGSGKSTLIKCVNGLEPVQQGKITVEDFEVTARGT
NLTKLRARIGMVFQHFELYPHMSVRENLCLGQQKVLGRSRDEANAKAEALIDRVGLLPHIDKFPGQLSGG
QQQRVAISRSLAMDPIAMLFDEPTSALDPEMINEVLDVMVELAREGMTMMVVTHEMGFARKVADRVIFMD
EGHIIEDRQTEAFFGNPESDRAKDFLSKILNH
>gi|56697504|ref|YP_167872.1| aspartate racemase, putative [Ruegeria pomeroyi DSS-3]
MRNGRLKLGIVGGLGARGGADILNKLVAATPVKSESDHREILFEQKPLSEPIPVSRPDYLPTHRKFYVFD
TLTRMEQNGCDAALLPCFITHTFLEELAAELPIELISIGDAIVAELARHHGAARRIGVLTTPYVRRNGFF
QRMLTADQQVLYPDAGTEAALLEAIYGPGGFKAGRPLPEVLPAIRRAVAALLAQGAEVIIPGMTELPVIF
GAGDVIADAPILDVNQIYARFALAQTSGRRPAVFKVGVVGGVGPAATVDFLKKIVEGTAAERDQDHIKLI
VEQNPQIPDRTENLVKGGPDPTLALYATCKKLERAGAQAIAIPCNTAHAFVDRIQKNLDIPIISILTETA
RFIGALHPEIGKVAVLATSGTIQSGLYQSALRDQGLDPVLPDAGMQEMVMEVIYGPSGVKAGFTTGRCAA
QLAQVIAAMTGQGAQAAILGCTELPLVHLPAPAAIRLIDPTEVLARACVQAAISARARDFAGGMG
>gi|56697505|ref|YP_167873.1| aspartate ammonia-lyase [Ruegeria pomeroyi DSS-3]
MDTTASRTEHDSIGACTIPQGAPWGSQTQRAIENFPITGIPISHYPEIVVALAQVKKACALTNAELGALT
PDKAAVIASVCDRIIAGQHHEAFCVDVMQGGAGTSTNMNANEVIANLGLIVLGGSYGDYGHLHPNDDVNR
SQSTNDVYPTAIRLATLSKARVLSAALRDLVQAFHDKGDEFAHINKVGRTQLQDAVPMTLGQEFHSFANT
LAEDIDRITDLGRLLAEVNLGGTAIGTRINTPEGYGPLVVEKLADITGLALSPARDLIEASSDLGAFVMF
SGALKRVAIKLSKICNDLRLLSSGPRAGLGEIILPPAQAGSSIMPGKVNPVIPEVVNQICYQAIGNDLTV
TMAAEAGQLQLNAMEPVIFYKVMETMTTLTGGMNVLNNRCVRGIRADEKRCAELLGGSLVLATLLAPVIG
YDAAAKVSKRARAEGITLREACLKQGLDAALVDSLL
>gi|56697506|ref|YP_167874.1| polar amino acid ABC transporter ATP-binding protein [Ruegeria pomeroyi DSS-3]
MPHMTATATWPPEDPIVSIRGVRKSFGTLEVLKGVDMDIMKGEVICIIGPSGSGKSTLIRCINALNDIQE
GSITVEGQEVHDPRLDKLELRKKIGMVFQQYNLFPHKTALQNIMMAPVLVMKENKAEVENRARALLKKVR
LEGKEDAYPGELSGGQQQRVAIARSLAMQPDVMLFDEVTAALDPETVKEVLLTIKELAAEGMTCILVTHE
MGFAREVADYIYFTDRGVIVEHGPPDSFFDDAQDERTKLFLSQIL
>gi|56697507|ref|YP_167875.1| polar amino acid ABC transporter permease [Ruegeria pomeroyi DSS-3]
MTPVRVLAAVPVWIPFALFFLCALWPSLALAQSGEAVRPFHALWRWAPFLITKGFLFNILISFLCLIIGT
GVGVLLGLCQISLLRPVRRISWFITQLFRNSPWLVILFIVMLALPFEVTIFGKAYFVPAWIKAVVGLSLP
IMANISEIVRGAIRSVPNTQWEAAEALAFTRQQTMWRIILPQCFKRMIPPWMNWYAILTMATPLVSILGV
EEVMNLTRQAIVAEENRPELLMPFYGFVLLLFFAYCYPIARLTLRLERKFAVKL
>gi|56697508|ref|YP_167876.1| polar amino acid ABC transporter permease [Ruegeria pomeroyi DSS-3]
MPHLSRRRGAPISGPLMLDAFSEFFRQLAEDYPRWNFVFFYQPVQAGKIWTGLQYTVILSLACLVFSVII
GVVGAWLQGSKRRLLRNLVQGYIQLFRNTPPFVQLLFFYFALGQLTPTYSPDGWLEVPIISNVGWAIISL
SFFAGAFNVEIFRSGIEAVPDATIEASEALGMTRLQTYSHVILPLAFRVSLPALNNNLVNLIKTTTQAFA
IAVPELLYQAVTIWNDYPSAQYPAMLLLFVVYIGLVGIMVLGMNRWERHLAIPGYGN
>gi|56697509|ref|YP_167877.1| polar amino acid ABC transporter periplasmic substrate-binding protein [Ruegeria pomeroyi DSS-3]
MNNFVGGTTIAAMLMSTGAAMAEQCTNETWNKIAQRGTIVVGVKADTRPWGYRDQTGGIIGMEADMARQV
ADTLGVALELVAVESSNRMQFLEGGRIDLMIATMSDRKDRREIVGIVGPNYYSSGTNVMTPKALGVTAWS
DLKNRPVCGKQGAFYNQIVEQRYGAQIIAFGSNAEALQALRDKKCIAWVYDDSSIAADLASGHYDEFEMP
LVSEDNNPWGLAVPIAERDCVFGRFMSGMQYSWHQSGELVALEQKWGIQATAYLAEQHARFADWLAD
>gi|56697510|ref|YP_167878.1| LysR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MELDWLEDFVALSSAGVFAKAADARNISQSAFTRRIKNLEYWVGTPLFDRSVHPVTLTQAGESFRPVALD
MINTLNTARAEARGLARREDAVLDFAALHTLAISYFPRWLNRISGAIGPIRTRVVAENFSGCVEAILSGS
SDFMLCYHHHTVPMIADDARYPSIRIAEDRMIAVSCPGLDGQPRFTLDGTDTIPLLCYTRDSFLGKMTNQ
IIDRAGLRARCDFLYENSVGEALKSACVEGLGIAWLPMAAVERELSEGRLIRVSTEAAENPISIRLYRSM
ERSRREVERFWSYASSL
>gi|56697511|ref|YP_167879.1| 2OG-Fe(II) oxygenase family oxidoreductase [Ruegeria pomeroyi DSS-3]
MSEFTHIPTIALGTRPDAEIAAEFRAAYGSTGFGYVTDHGIDTTLTEALFEASRRFHALPLATKMAIAVD
RSHRGYIPINSSTDVNSTLATVTKPNQSASFMMMREDAVADPDEYLSGPNRWPDLEGFRDTLERYSAAMS
ALGRRLMAIALDAAGVSDPSILSAFDRPTLWLRLLHYPPQPPASPDDLYGSAPHTDFGCLTLLAQDGVGG
LQVRTPAGHWVDVPHRPGALVVNVGDMLHRMSNGRLRSTPHRVINTSGRERFSCPFFYDPHVSTVIEPLP
GTGAPKYPPLVFGDFLRSELEAAYDAHKPACAAANSP
>gi|56697512|ref|YP_167880.1| alanine racemase [Ruegeria pomeroyi DSS-3]
MNRGMSTAHLTIDLDALADNWQALNARTTAETAAVVKADGYGLGAARVAARLARAGARTFFVAAAEEGAA
VRKAVGPDPMIGVFSGHMEGDAGILRANRLTPMINSVDQMLRHVEQLPGHRFGVQLDTGMNRLGLEPEDW
AQLREIALRQNPALVMSHLACADEPGHDMNRKQLRLFKEMTDGIKAPRSLAATGGILLGPDYHFDLCRPG
VGLYGGEPFDEAKAVVTLDLPVIQVRDLAEGETVGYGNSWTAPRACRIATVAAGYADGLHRAMGRGITLF
AGKTACPVVGRISMDLITVDVSGLDHEPASLQLLNRLQTVDDLAEAAGTIGYEILTSMGRRYRRSYVSCS
ASADRAVESIRDKLRRRPDLLPQSLAE
>gi|56697513|ref|YP_167881.1| membrane protein [Ruegeria pomeroyi DSS-3]
MSPLALLARLGRLALSVLASFGRVTLFALDAVSHILRPPYYPRELAIALLNIGWLSLPVVGLTAIFTGGA
LALQIYAGGARFNAEAVVPQIVAIGMVRELGPVLVGLMIAARVTSSIAAEIATMKVTEQIDALVTLSTHP
MKYLTAPRVLAALITVPLLVGIGDIIGIMGGYTVAVQNLGFNAAAYLQNTVDFLETRDVVSSLVKGAVFG
VIAALMGCYYGMNSGRGAQGVGRATKGSVEAAAVLILAANFVLTGVFFSI
>gi|56697514|ref|YP_167882.1| ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MIRMENVHKAFGPNRVLQGMNLEVPRGTSMVIIGGSGTGKSVALKCVLGLIRPDSGKIYVDGKDAADTGD
RDAFLARFGMLFQGGALFDSLPVWQNVAFRLLRGSLKRPTDEAREIAIEKLRRVGLKPDVADRLPAELSG
GMQKRVGLARAIAAEPEIIFFDEPTTGLDPIMAGVINELIREIVTEMGATAMTITHDMTSVRAIADNVAM
LHGGVIQWTGPVAQMDDSGDPYLDQFIHGRAEGPIEAVR
>gi|56697515|ref|YP_167883.1| paraquat-inducible protein A, putative [Ruegeria pomeroyi DSS-3]
MTGPAENSTNFPGHRLKSPLPLRLATLSLLILYPVAWFAPLMRAGLLPIFGLSEISVITGLQSLWASDVA
LALIVTAFALFAPYLKTIGTALIQWNLLDPRAQPALHILGKLAMADIFLIALYITLAKGISYATIEAAWG
LYLFTACILASIALGLLTERQIRKATR
>gi|56697516|ref|YP_167884.1| DNA repair protein RadA [Ruegeria pomeroyi DSS-3]
MAKPSFSCSACGASFTKWSGRCEGCGDWNTISQDAGLSAGPAKKSLGAKRGRAVTLTDLASEEAPPPRAM
SGIGELDRVLGGGLVPASAILVGGDPGIGKSTLLLQAVAAFARKGLKTLYVSGEEASAQVRMRARRLGLA
DAPVQLAAETNLRDILTTLEAEKPGLVIIDSIQTMWADNVDSAPGSVSQVRASAHELTTFAKRTGISVIM
VGHVTKDGQIAGPRVVEHMVDTVLYFEGERGHQFRILRSVKNRFGAADEIGVFEMTGAGLAEVTNPSALF
LSERGAPSPGSVVFAGIEGTRPVLVELQALVAPSPHSQPRRTVVGWDGGRLAMILAVLEARCGIPFAGLD
VYLNVAGGLKISEPAADLAVAAALLSAREDRALPGDTVIFGEISLSGALRPASQTENRLKEAQKLGFTSA
IAPAGGKTGTLEGLTMTRPTDLVGFVGEFFGAG
>gi|56697517|ref|YP_167885.1| CvpA family protein [Ruegeria pomeroyi DSS-3]
MEGFTIIDGVVALIIVLSALLAYARGFVREAMAIAGWIAAAVLAFLFAPKAMPLIRELPVVGEFLTDSCE
LSVIAAFAAVFALALVVVSFFTPLFSSLVQRSALGGLDQALGFIFGVARGVLLVAIAFFVYDTVMTGQNF
TIVDESRSAQVFARMTGKIEEQNPEAALGWVTQQYEGLVGTCAQ
>gi|56697518|ref|YP_167886.1| hypothetical protein SPO2676 [Ruegeria pomeroyi DSS-3]
MLLSHETAFARFTAVTATMAPPAPGLPAGTMLETEAGWSPVEEIRPGTRVATIDGGFCQVIAAHAVPPAP
APLWRIPGGTLGTCSDLLLPEGHFLALNGPDCRHLFGLPTVLAPVAALAGFEGIHRLPARPLPAHSLRFA
EEEVVWAQTGARILMPGEAPGRHFQRLDYGQTRALLMLRSGGNLAPDLAA
>gi|56697519|ref|YP_167887.1| amidophosphoribosyltransferase [Ruegeria pomeroyi DSS-3]
MPAPRFPIAHPFDDDKLREECGIFGVIGVQDAASFVALGLHALQHRGQEAGGIVTHDPEQGFNSARRFGY
VRDNFTSQSVMETLPGPLGIGHVRYSTAGSKGQTQIRDVQPFFGEFAMGGAAIAHNGNITNANALRRELI
ERGSIFQSSSDSECIIHLMARSLQRTIPERMEDALRRVEGAFSVVAMTRTKLIGVRDPLGVRPLVLGKVG
DGWILSSETCALDIIGAEFIREIEPGEMVVITAEDGVQSHFPFRPQPSKFCIFEHVYFSRPDSILGGRSV
YETREAIGRELAKESPVEADLVCPVPDSGTPAAIGFSLESGIPYAMGIIRNQYMGRTFIEPTEQIRNMGV
RLKLNVNRALIRGKRVILVDDSVVRGTTSRKIKDMILDAGAKEVHFRIASPPTAWPCFYGVDTPEREKLL
AATMSEDEMRTHLGVDSLKFISLNGLYRAVGETNGRDNACPQYCDACFSGEYPVRPSDMIEKGFSLKAAE
>gi|56697520|ref|YP_167888.1| hypothetical protein SPO2678 [Ruegeria pomeroyi DSS-3]
MANGIVEEAATQAAKIRANGLTVLGVFGPKDDLRALVRLPGGKIEEVSPGDRTRAGEVMGIDAEGLMLRH
GGQTRRIGIAGG
>gi|56697521|ref|YP_167889.1| short chain dehydrogenase/reductase family oxidoreductase [Ruegeria pomeroyi DSS-3]
MTQETKLALITGASRGLGAALAEALAPTHHIVAVARTSGALEELDDRIKACGGSATLAPMDITDPAAMAT
LCRGIHDRWGQLDLWLHTAIHAAPLSPAVFVDPKDWSKSVAVNATATSVLIPYVAPLLGETGQAVFFDDP
KAGAKFYGAYGASKAAQMSLARSWAAETERTGPRVTIVKPAPMATALRARFHPGEDRAALTPCSDEAARI
VALL
>gi|56697522|ref|YP_167890.1| hypothetical protein SPO2680 [Ruegeria pomeroyi DSS-3]
MTEDALNRIADALERMAPAPLRAPDFAVAPAFVWHVAPERLEPVRDVNRVDLDLLVGINRARDTLLDNTR
RFAAGHGANNALLWGARGMGKSSLVKAVHGALQPEFPNLKLVELQREDLPSVARLLNHLRAAPERFILFC
DDLSFSHDDQHYKSLKAVLDGGIEGRPENVVFYATSNRRHLMPRDMIENERSSAINPSEAVEEKVSLSDR
FGLWLGFHPCDQDEYLAMIDGYCAAYGVSVAPDTLRAEAIEWQATRGARSGRVAWQFFTDLAGRQGIALR
>gi|56697523|ref|YP_167891.1| twin-arginine translocation protein TatC [Ruegeria pomeroyi DSS-3]
MSKTDEIDDTSAPLIEHLAELRTRLIRAVLAFIVGIVLAFTVAEPILQFLLAPIEATLRDLGDPSPTLQY
TSPQEYLFTLFRISMVFGFALSFPVIGYQLWRFVAPGLYRSEKGAFLPFLVASPFMFLLGASFAQFVVTP
LAMQFFLGFADVSSIFANLLTGGGGTVPSDVAVVPETTDGVKITFFGKVNESLDITLKFIMAFGLCFQLP
VLLTLMGKAGLVSAEGLGSVRKYAMVAILTLAALVTPPDVVTQVILFVVVYGLYEVSIFLVARVEKKREA
QLRAEGYYDDEEAFDDPLMAEFDAEEAEERKE
>gi|56697524|ref|YP_167892.1| twin-arginine translocation protein TatB [Ruegeria pomeroyi DSS-3]
MFDLGWSELLVIGVVALIVVGPKDLPVLFRNVGRWVGKARGLAREFSRAMNDAADEAGVKDISKGLKAAT
NPVDAALDGVRKAATDFKTDLDPTKYNPDSETGKLAAERAEQAKKIQAATARVAAERRLREATAELEKAK
DAEAALKPGPET
>gi|56697525|ref|YP_167893.1| twin arginine-targeting protein translocase [Ruegeria pomeroyi DSS-3]
MLNNIGLPGLLLIAVVVLVLFGRGKISSLMGEVGKGITAFKKGVSDGSKELEEDVAQTAKDVTPEADKDK
A
>gi|56697526|ref|YP_167894.1| hypothetical protein SPO2684 [Ruegeria pomeroyi DSS-3]
MTRTAEIVTFALAPGVTQEAFVALSKDTETFVRALPGFVDRKLSQGADGRWTDYVIWTDANAAAAAAKAF
ETAECAAALMGAIAPDSVSMRHETVLWRM
>gi|56697527|ref|YP_167895.1| hypothetical protein SPO2685 [Ruegeria pomeroyi DSS-3]
MRRTDRLFDIIQILRDGKLHRARDIAARLEVSVRTIYRDMDTLVASGVPVEGERGVGYMVREQITLPPLN
LTPEELEALNLGMAIVAEAADPELKAAAQRLAEKIDAVLPTQTIAEADAWKFAVYPFADAARGLAHMAPI
RAAIKARQKLRLVYRRIDGELTERTIRPLHMEYWGRVWTVTAWCELRAGFRVFRIDLIETLTPLPELFRD
EPGKTLADYQP
>gi|56697528|ref|YP_167896.1| LysM/M23/M37 peptidase [Ruegeria pomeroyi DSS-3]
MSVLFRTLPRPLMGLSALALLAACEAPLDYDLRGQIGAFNTTEAAQSARTAARPKPDERGVISYPNYQVA
VAKRGDTVATLSDRVGLPVGEVARFNGLQPTDGLREGEVLALPRRVTEPVGQGNNVDIASLAGSAIDQAP
DTTPVQTTALEPAKPAASPAPKPAAPEPVRHKVERGETAYTISRLYQVPVKALGEWNGLGPDFTIREGQY
LLIPVKDQPAPKSAAKPAAATTTTAAVSAPGAGSATPTPPSATKPLPEEKVPAAKPAEPDVSVGQPTASS
NARLGFPVKGKIVRPYSKGKNDGIDIAGAPGSAVSAAEAGTVAAITADADQVPIVVIRHADNLLTVYANV
DGIEVNKGDTVSRGQKIARLRGGDNAYVHFEVRKGFDSFDPEPYLK
>gi|56697529|ref|YP_167897.1| protein-L-isoaspartate O-methyltransferase [Ruegeria pomeroyi DSS-3]
MSGPDPETKMQFLFALRSKGVTDKRVLAAMEEVDRGLFVRGLFSGRAYEDMPLPIACGQTISQPSVVGLM
TQALEVNPRDKVLEVGTGSGYQAAILAKLARRVYTVDRHARLVRAAQLVFQQLQLVNITTMTADGSFGLP
DQAPFDRIIVTAAAEDAPGPLLAQLKIGGIMVLPVGQSDTVQTLIRVRRTEQGFDYDELRPVRFVPLLEG
LGKDG
>gi|56697530|ref|YP_167898.1| stationary phase survival protein SurE [Ruegeria pomeroyi DSS-3]
MRILITNDDGINAPGLAALEQVALELAGPGGEVWTVAPAFEQSGVGHCISYTHPMLIARMGERRFAAEGS
PADCVLAGLHDVMKDAPPDLVLSGVNRGNNSAENALYSGTLGGAMEAALQGLRAIALSQFFGPRNYGRTD
PFEIAQSHGVQVIRRILDTWPQERPDYRLFYNVNFPPVPAAEVKGLRAVRQGFREGTRFSAEPHLSPSGK
RFLWIKGGDQQQRTAPGTDAAANLDGYVSVTPMRADLTADDALEALQATL
>gi|56697531|ref|YP_167899.1| iron ABC transporter, ATP-binding protein, putative [Ruegeria pomeroyi DSS-3]
MTAGQTPPRLEIRNLVRVFDGRRVVDDVSLHIRAGQVTCLLGPSGCGKSTTLRMIAGVEMQDSGEIYVDG
KLICDTVFRVPPERREIGLMFQDFALFPHLSVAGNVAFGLKGSREEKRARVEELLARVSLGGHIDSYPHQ
LSGGEQQRVALARALAPRPRIMLMDEPFSGLDNRLRDGIRDDTLALLKEEDAAVLLVTHEPEEAMRMADE
IALMRGGRIVQQGAPYNVYTRPADRAAVAFFSDINVLRANVTGALAQTPFGQFLAPGFPDNTEVDIVFRP
QHVKLDFDRGGKGPLPTPSDGVAARGVVERARFLGSESLVEFRMDFDGSLLKATVPNVFIPETGRVMWLT
IRRDRCFVFPADRKR
>gi|56697532|ref|YP_167900.1| hypothetical protein SPO2690 [Ruegeria pomeroyi DSS-3]
MNHEAVQNYYGEVLQSSADLQTNACCTPDAVPAHLKPVLGKLHDEVMARYYGCGLIAPLALEGARILDLG
CGAGRDVYALSALVGESGAVVGVDMTPAQLEVAQAHRAYHAEVFGHAAPNTEFHQGYIEKLDDLPLKPGS
FDIIVSNCVLNLATDKAAVLRGAQRLLKPGGEMYFSDVYADRRIPEALARDEVLYGECLSGALYWNDFLS
LARGAGFGDPRMVESRLLTIENPELERRVGPIRFLSATYRLFNLAGLEPDCEDYGQAVIYKGTVPHAPHE
FVLDDHHVIETGKVFPVCGNSWRMLAESRFAPHFQFIGDFSTHYGIFAGCGGASPFNGLSPVAPAASGGC
C
>gi|56697533|ref|YP_167901.1| hypothetical protein SPO2691 [Ruegeria pomeroyi DSS-3]
MTQGFSLKDQLFNADKVAYLAGLFDGPGFDAPGFQARVMARLHELELKARIDWIATCLAEAVPGALPEVA
PVILRALPPPLDPTLSDDDFGDFIFAPLGEWVAAVGIEDPEPALDLLAELTQRFSMEWAIRPFLNRWPDQ
VLAQMERWCDHDSYHVRRLVSEGTRPRLPWGLGVSLDVDAALPLLDRLHGDPTRYVTRSVANHLNDIAKK
APDLVLTRLGGWREEGRQRPEELSWMTGHALRGLVKAGHPGAMAALGYDPDVALDVQLSLPGEARIGDAV
EIGVTLSGARDVPVLVDYILHFQRPGGKVSAKVHKLKQARLSGGRLQLSKRHKLKGDASTFTLVPGPHRV
EVQVNGRVRAAGSFDLLG
>gi|56697534|ref|YP_167902.1| short chain dehydrogenase/reductase family oxidoreductase [Ruegeria pomeroyi DSS-3]
MDLGISGKRALVCASSKGLGLGCAEALAAAGVDLVMNARGAEALEAAAESIRRVHGVAVTTVACDVTTEE
GQAQVIEAARGVDILVTNAGGPPPGLWSDWDRGDFIRALDANMLTPIAFMKALLPGMIDKGWGRVVNITS
QSVRAPIPALGLSNAARTGLTGYVAGTSRQVAPHGVTINNLLPGIHATDRANALDGPVAEQKGISLDAAR
AERAATIPARRYGTPAEFGAACAFLCSQHAGFIVGQNLLLDGGGTNLTM
>gi|56697535|ref|YP_167903.1| hypothetical protein SPO2693 [Ruegeria pomeroyi DSS-3]
MTRYAPTQSVPVYRAEDFPVTSGANLGDGISPMDELMLDDVYGMAPGARSWRLGLETMDNGAFRIAGDTE
LGQPGAELHLDCALSLMSPDGQTTDAIVLVELDETGHIADLYLLPLAPLVPKTDYTLVGMDRARARQKFA
QVACVSFTRGTHITLGSGAQVRIEDLKVGDRVLTRDDGVREVRWIGQTTVRAVGDFAPIVIRAGTLNNEN
DLVVSPDHRLFVYQRRDEMGVGQPELLLKARHLVNGDTVFVQEGGFVDYFQLLFDRHHIIYAEGIAAETM
LLDPRTRPALPQEMLEQVSPLLDQHGSGDSHGMDVAKALLDRPDVIDLLKRASTKR
>gi|56697536|ref|YP_167904.1| cytochrome c' [Ruegeria pomeroyi DSS-3]
MPLRPLPLVVALLSASAALAHSGVSNPAVKARMHTMMQIADNTKVLGDMAKGKTAFDAEAARAAAAAIAA
HSASVTALFSAEEQDPKSEALPAIWQDFETFSRKSEALTLAAAEAAGSIQSEADLKPALAGIGGACKSCH
MDFRKPQ
>gi|56697537|ref|YP_167905.1| peptide chain release factor 3 [Ruegeria pomeroyi DSS-3]
MLDIASNRPALPPEIARRRTFAIISHPDAGKTTLTEKFLLFGGAIQMAGQVRAKGEARRTRSDFMQMEKD
RGISVSASAMSFDYKTFRFNLVDTPGHSDFSEDTYRTLTAVDAAVMVIDGAKGVESQTQKLFEVCRLRDL
PILTFCNKMDRESRDTFEIIDEIQEMLAIDVTPASWPIGQGRDFIGCYDILRDRLELMDRADRNKVAESI
EINGLDDPKLAQHVPAHLLEQLHEELEMARALLPELDPQAVLEGHMTPIWFGSAINSFGVKELMDGIGSY
GPEPQIQSAEPRKISPEETKVSGFVFKVQANMDPKHRDRVAFVRMASGHFKRGMKLTHVRTKKPMAVSNP
VLFLASDRELADEAWAGDIIGIPNHGQLRIGDTLTEGEALRVTGIPSFAPELLQGVRAGDPMKAKHLEKA
LMQFAEEGAAKVFKPMIGSGFIVGVVGALQFEVLASRIELEYGLPVRFDGSQFTSARWVAGDKAALDKFI
NANKQHIAHDHDGDTVYLTRLQWDIDRVIRDYPELKLTATKEMMV
>gi|56697538|ref|YP_167906.1| beta-lactamase, putative [Ruegeria pomeroyi DSS-3]
MPVRIPNPDLAVDDSNKQRWNRPAHRRHGFHNAHRLFRRALMVRSRNVLPLAPSPIDLPAALPELRALLA
HPAFSAFCCLRGDALIFEAAAEDFSPTAPHSIQSVTKLHIHLIFGQLLAQGLVSLDAPVSDYLPDIGSGY
ADAPVWALLNMAVHNDFSEDYSDPLSNCYTEEIALGWRLPPEGMPEPSLTQFAAGITGFRPGPPPAFAEY
KSANTDVLTLIAAAVSPLPLTRLVEEIADAAGYEGAFHISLSPEQLPAFSGGGCLSARDLARFGLLFAGL
SGDRAYPNADFLRSCLGRAAPSLSPPRDWLRYCGHLMTDGRLLGHAGYGGQFLLVDSETGTSCALLSVLE
NDAGYDVDYMSQVADCLRRVCRYLA
>gi|56697539|ref|YP_167907.1| acyl-CoA synthetase, putative [Ruegeria pomeroyi DSS-3]
MRPAQRENFRRLLTPRHIAFVGGRDAAIAIREARRRGFAGRMWAVNPKRDVLEGVACVPTIADLPEAPDA
VYLAIPAAAVTGALGQLSAMGVGGVVCFSAGFKETGDAAAERALIAAAGDMALIGPNCYGLINYVGNSAL
WSFEHGGWSPGYGAAIITQSGMFSSDITMSQRSLPMAYMVSAGNQAVLGLEDFLDAFASDPVVRAIGLHI
EGLQDVARFERTALRALERGVPVVALKSGSSRIGAALTISHTGSLSGANELYEALFARCGVISVSNPSQF
LETLKLLCVTGAPRGARVAGFTCSGGGATMLADHAERIGLSFPAVEGAHRTELKALLPEIATVSNPLDYT
TPIWGQGEHTYPVFSRTLEAVTPDFTVLVQDYPAAGLDESKVFYLNDAGAFARAATEQQVPAAILATIPE
NMDAETRQMLIEQGVAPMQGIHEALNAIRDAAGWSAARARILSAKPAPLLPPLVPANLVGQTEDIGKDWL
RGAGCAVPEGRSVTAREVESAAAEIGFPVALKMMSPRLAHKTEAGAVALNVADQSELRAALAQMPGAVAA
YDPDALTDRFLVEAMSPPPLAELILTLRRDPQFGHALVLGSGGVLVELLGDAVTLLLPCSVADVQRGLEG
LRLAPLLGGYRGRPAADLARIADDIYALTRAYLQDCAEIAEVEINPLFVYPDRVVAIDVLLHRVAGQ
>gi|56697540|ref|YP_167908.1| acyl-CoA dehydrogenase family protein [Ruegeria pomeroyi DSS-3]
MNMETSHEHELLTATVRKFVDTEMMPHEDEVDRLGQVPEEIGRQIEARAHELGLFACNLPEEVGGGGLDL
SAQRIIEQEFGKTTHALHSWAARPTEILLACEGDQREKYLLPCVRGEKRELFALTEPDAGSDAMGMKSNA
RRDGDDWILNGSKHFISGPCMPDFAIVFAATGADDTPRGPRKRVTAFLVDVGTPGFVCREGTRSVSYRGY
KTFELHFDNVRLGPGQILGEEGRGFEIAGQWLGMGRIWVGASCCGKAERILDMATEWAANRRQFGQPIGS
FQATGFRLADGAMNLRAANLMVTDAVARHRAGRMADQDAAMVKVFCSEMLGRIADDAVQIFGGMGLMEEL
PVQRLWRDSRLERIWDGTSEIQRHIITRSMLRPLGA
>gi|56697541|ref|YP_167909.1| opine/polyamine ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MRPGLFSLFNRAGAWVLLLFLVTPALIAIPVSLTPKRFLSMPSDELSLRHFQNLFTSEEWLSSFFQSGVI
ALSTSVLATFLGTLCAIGLWRVSSKYSELVRAFLLLPLIIPQIISAMAFYRLWIPLGLLDSYPGLILAHT
ILAAPMVLITVSASLATFDPRLEQASKNLGASNWTTMRRVILPSIRPGVFAGALFAFILSWDEIVVTLFI
SKFSVYTLPRRMWNGIRENTDPTVAAAAVVLIAITIIAFVVSAILSRRNAGQSRS
>gi|56697542|ref|YP_167910.1| opine/polyamine ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MVGAALRNTDMNAVARHIHPGWAIIAPLLVLVVALYLGPILNIMWLSVTDPEPGLGNYRMLYESDSLLRI
VWTTLRICVITTVFSVTLGYSIAYAMVHCHQRQKNYMLTLLLVSFWISILVRTFSWLMLLGRSGLINNTL
ETLGLVSAPIAFMRNELGVLIGMVHYMIPYAVLPLLVSMQSLDSRVMDASRNLGASGSQTFWRIYLPLTL
PGIVASTLLVFILSLGFYVTPAVLGGGKVLMVAEYISVQLLVTLKWGTAAMLAALMLAGVLAMLWIMSRF
MKLSAVFGGSTR
>gi|56697543|ref|YP_167911.1| opine/polyamine ABC transporter, periplasmic substrate-binding protein [Ruegeria pomeroyi DSS-3]
MQDKQFMKEMLTESAHAYKEGRMDRRTFLALCGASGIAMNAVLAGDAQAAADHVVMWNWGGQSVECHGSA
IGEAFTAATGKGVKFDTSGPLEGKIKEMVDSGNVTADVADADLFNAVSLGPTGHLEPIDYSIVSKDKTLP
GYALEHGVSVILYGYAFVYDTEAYGDNPPKDWKDFFDTANFPGTRSLYKWANGSLEAALMADGVAGDALY
PLDMERALNKIKSIKDDSIYWGSGSEVHSMVVNGEVTMAMIWQNRGRNIENDTDGRFKLVNNQAMAMPGA
YIVPKGNPAGREAVMQFIATAQEVPAQLMLLDCLGMTPSNPAAFGEIPEDQQPYAITSAMNIDKIVYNDP
TWWGENGGDAVNAFLEAIS
>gi|56697544|ref|YP_167912.1| opine/polyamine ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MAEAFSGGSLRIAGVSKYFGTFRAVNAVDLEIRKGEFLTLLGPSGSGKTTLLMMIAGFLDITSGDIALDG
SSIANVPAEKRNFGMVFQGYALFPHMTVRDNIGYALSVRKRPEAEIRTRVDEMLELVQLQDFANRKPGQL
SGGQQQRVALARALCFAPPVLLLDEPLGALDKKLRVEVQEQLKDIHRRVGTTFIYVTHDQEEALSMSDRI
VIMRDGAIEQVGSPQELYERPATRFAASFLGKSNFVQQNGQTYALRPEKIDIHLGTGHPQARRKGTITSI
TYFGSMQRIIVETTEAEQIEVDIDVWRNQQPLHEGETVELSWQDAAAVDLKES
>gi|56697545|ref|YP_167913.1| hypothetical protein SPO2703 [Ruegeria pomeroyi DSS-3]
MNNEVVLTCAVTGAGDTTGKSPHVPVTPKAIAEAAIEAARAGAAIVHLHARDPETGQGSRDPKLFKEIVD
RVRDSGTDVVINLTAGMGGDWISDPANPAMPGPGTDMIGPEARLAHVEECRPDICSLDCGTLNFSDTDMI
YISTPPTLRRMAALVQEWGVKPELEVFDLGHIRFAKAMIAEGLIDAPPMFQLCLGIPWGADQDVETMVAM
KSQLPEGASWASFGIGRGQMPMAAAAVALGGNVRVGLEDNIYLDRGVLATNGQLVTRAREIIERMGARLL
TPKEARAKLNLRGAEG
>gi|56697546|ref|YP_167914.1| AraC family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MQLDLLPPQDRGQVHSVFVVVPRFNLTTLITMIETMRIGNYLSSERLFSWEVTSFDGLNLGASNGVRVHL
DVEPDQTAPADQVFVLASWGGEHYQNKALASWLRKRARQGERICAVELGCYLVARAGLMDGKEATTHWSW
INGFQEKFDQISVVEQLFTIDGRILTCAGGMAGVDLMLRLIEQSHGAGFSGEIADQMLHNPIRKGSSSQR
RTMGRGTESILPLVRQAMTLIERNIEEPLTVPQIAAALDVSQRQLERQFKKHVGCTVVQFGLLRRLQNAR
VLLIATELSVREIATASGFNTLSHFSYSFSKFFGRRPSDYREAWPSNEAAPTWPGTLSDFLHAINSGDKR
SKAPLAPREGH
>gi|56697547|ref|YP_167915.1| 3-hydroxyacyl-CoA dehydrogenase family protein [Ruegeria pomeroyi DSS-3]
MKYPDPTSITRVTSIGGGPIGGGWAAHFLARGYDVTSYLHDRAEEGAFRTILDTAWISLTALGLAPGASL
DRLRVVHDLDAAVAGAGFIQESAPENLAMKQALYHRLGRIVPENVVIGSSTSGLMMTDIQANCETPGRTV
IGHPFNPPYLLPLVEIVGGERTDPAAVEWAGEFYRVAGKAPLMMKKEIPGFVATRLQEALWREALHMVAN
GEATPEDIDIALMNGPAPRMVSQGQCMAFHVACGAGGMATNLDQFGPALKLPWTRLEAPELTQELRDRMV
DGCNAVAGDRHFADMAAQRDREIVAVLNALRAAREAP
>gi|56697548|ref|YP_167916.1| carnitinyl-CoA dehydratase [Ruegeria pomeroyi DSS-3]
MMEVPPMSEGVSTRRDGHVLEVTLSRGKVNAIDVPTSQALAAAFQELHEDKELRCAILTGGGDKIFSAGW
DLKALNAGEMQLDNWWESDDYGFGGFTGLTENWALNKPVIAAINGLAIGGGFEMAMACDLLIAADHVEFG
LPEMPLGIVPDAGALQRLPRRIPHNIAMEMFLLGRRMSATEAAHYGLVNKVVPKEQLMDAAREWAASIAW
SAPLAMQSVKEVQREIECVPLEQAFHKMRTDPMPTYRKMLKSDDAAEGVAAFVEKREPRFKGE
>gi|56697549|ref|YP_167917.1| luciferase family protein [Ruegeria pomeroyi DSS-3]
MKFQLAINLERIDDSLDMNDVARHTLEMVQMAEEGGFEIVWAAEHHAIEMTIAPNPFQILTWWAGETSKI
RLGTAVATAAYWHPINLAGEAAFLDLISGGRLEFGIGSGAYQREFDRMKPGLKQSDAWRYMQEMLPAVRA
LWQGDYAHDGEFWQFPTSTSVPKPVQADMPVWVAARSPITYDYAVRNRCHINCWPLTRPFAEAELYKRQL
DEAIAKADNGWSPRFALMRHACIYDNAADRQQALDAIRRLLSQFENLFRNAGDVVNGFPAALPLDQIAGR
EQYDPEMLEENLMFGSPETAIGKLKRYEDLGVNEFIYYASMGLDHDAQKRSLRMFCDEVMPEFR
>gi|56697550|ref|YP_167918.1| aldehyde dehydrogenase family protein [Ruegeria pomeroyi DSS-3]
MADIQSYRMLIDGAWVDASDGALFDSTNPADGKVWCRIPEATEADVNRAVEAAHRAFTSGPWARMTPTER
GKLLRRLGDLLADRSEELGRIESVDTGKMLKETRWQAKYIAEFIHFFAGCADKVSGETLPIDKPDMFVFT
KREPLGVVAAVVPWNSQLFLVAVKIGPALAAGNTVVLKASEHASAAMLEFGKLIEEAGFPPGVVNIVTGH
GEPCGRALTGHPLVARVSFTGGPNAARHVLENAKRNFAEVSLELGGKSPFIVFEDANIESAVNASIAGIF
GATGQSCVAGSRLYLHEDIAEEFLDRMVTQARAIVIGDPLAEETQMGPLCTDGQLAHIQREVAHAQAEGG
TVLTGGKQPEGLGGLFYEPTIIDCPRQDLRIVDTELFGPVLSVQRFRTEEEVLALANDSEHGLAAGIFTR
DSARSLRMAGAVRAGIVWVNTYRVVSPIAEFGGIKGSGYGRESGFQAIYDYTRPKTVWMNTSDEPMANPF
VMR
>gi|56697551|ref|YP_167919.1| endoribonuclease L-PSP, putative [Ruegeria pomeroyi DSS-3]
MTSSKKQVIGGPLEIGGRVLSLSRAIRAGDFVFLTGQIPMRDGVPITTGSVEEQTRAVLDDITATLALAG
CTRDDVVKAMVWLRARSDFPGFNAVYGEYFPHDPPTRSAVVSDLLVDVRVEVEVMAYKPLGGEG
>gi|56697552|ref|YP_167920.1| 3-oxoadipate enol-lactonase family protein [Ruegeria pomeroyi DSS-3]
MPIAPDGSTYEIAGPVDAPCVVLVHGLGLNRACWQWTSPALTDGYRVLSYDLYGHGDSVDPPEPPSLSLF
SRQLQGLLDHCGIADAVIVGFSLGGMIARRFAQDCPDRARALALLHSPHQRSAQAQAAILARVEQARDQG
PQSTVEAALERWFTEGFRRANPAMMETVRGWVTANRKEVYHRIYRVLAEGIDEITAPVPPLSCPALVITG
DEDYGNGPEMTRAIAAEIAGAQALILPGLRHMALAEDPGAINTPLRRFLDSLPKGVTK
>gi|56697553|ref|YP_167921.1| CaiB/BaiF family protein [Ruegeria pomeroyi DSS-3]
MSSTLLKGIRVLDLSRMLSGPYCSMFLADHGAEVIKIEGGSGDTSRNNGPYRADDPGHDWAGYFVSLNRG
KKSIRLDLKSLEGKAAFRRLATTADVVLENFRPGVMDRLDLSYESLAEANPRLVYAAIRGFGDPRTGASP
YADWPSYDVVAQAMGGLMAMTGPDADTPTKVGPGIGDIFAGMMMSFGILAALREAEATGKGRFVDVAMYD
AMISMCERMVYLHDMTGQVPGPEGNGHPLLAPFGVFPAADGQVALGIVDDSFWQKLTAIMNLPDLGSDAR
FSSRAGRSANAGEINRVVSGWTATRSKAELTALLGGQVPFGPLNTVADIAADPHVAARQMLARIPHPEPG
HAPWTVAANPLRFAGQVAPPLPAPPRLGEHDALLDTLADSAPLDEDARRDLRRAFGQFATGVTVLTTRQE
DGTPRGFTANSFTSVSLDPPLLLVCLAKTAHSCDVFAQAPHFAVNILSDAQKEISGLFASRSTEKFAGTH
WHPGPHELPLINRALATFACARHKLVDAGDHLILIGRVLNHAVTEGKPLGFHNGAYFDLGLENRLADAAT
KDANGIIAAVLADGARILLEVTPDGTLTVPKAPPRDNTVAGFLRHMDSRGLTARLDHLYAVFQNSQTGAH
SIVYHGTVSGTAPPGMRYHDLAALPLDQVANDTERSLLARYQREYRHGSFGIYHGTERSGIVHSIADHTE
YTV
>gi|56697554|ref|YP_167922.1| hypothetical protein SPO2712 [Ruegeria pomeroyi DSS-3]
MLPELRKVVTFDEDIHTEGGRAADPVLRMIGVAAVVTNPWAGRGFVEDLSPEIRRMAPVLGKMLTDRLIA
LAGSGDAIEAYGKACISGTDCEIEHASALIHTLQFGNFYREAVGAKSYLGFTNTRGPANTQIQIPLMDKH
DTGRRSHYLTVQFSIYDAPACDELVVALGAATRGRPHHRIGDRYSDLAALGRDVQDPAGVEPKK
>gi|56697555|ref|YP_167923.1| preprotein translocase subunit SecA [Ruegeria pomeroyi DSS-3]
MSDTFPGQAPGAFYPRAPAEPAKSKLDRWIEKYTTLPRRRRRARPSRFFAWRVLRRGKAFAQMSDDRLQG
EVRAAAYGMRAARAHPGEALLVRSFALIRECAGRELGQRHYATQILGARAVLNGAVAEMQTGEGKTLAIT
LAAGTAALAGRRVHVITANDYLAGRDADTMRGLYARLGLTCAAVEPGCTPEERRAAFAADIVYASGKEVA
FTFLRDRVAMGGRAGDIGLRTRAFFDGTGLLLPGLQFAIVDEIDSVMIDEARTPLILSVPPADAEVEAEA
ARAAHAIAAELKEGRDYRLDRLRHAVELSRNGCDRLADLAERMPPAWRPAPIREDAVRTAISAIRLHQRD
EHYILRDGKVEIVDEFTGRIMPDRSWSAGLHQAVEAKEGVEITSRRVTLAQITFQRFFRRYIHLGGMTGT
ATEAADEFWSVYDLPVVRIPTHKRSRRRTWKTQVSTRAATKWARVAKRAKALSASGRPVLIGTRTVAASE
AASAALHALGVPHRVLSAAQDADEAAVVAEAGRAGAVTVATNMAGRGTDIILDAEARKAGGLHVIMTEKH
SSRRIDRQLAGRAGRQGDPGSTEAILSAEDSLLPEFGGRYSSFVTRFGGSAVLSALTDAQRRAERTHVAA
RRRLLELDEQMAENLAFTGTPE
>gi|56697556|ref|YP_167924.1| M50 family peptidase [Ruegeria pomeroyi DSS-3]
MSGTLHSQTWYRVADLTPRLRTHAEVHRAVFRGEVWYVVEDHASGAYLRLSEAAWRLVGLMNGRRTMEEI
WRAAAEALGDDLPAQDEVIQLLIRLHRSDVLHAAIPPDMEQVVQRGRTDSRKKRLASLRNPLAIRVPVLD
PDNFVRATGWLVRPFFSWFGALVWLAVVCGGLFAALQNIDALQSNIADRALTAGNLLLILTVYPLVKAVH
ELGHAYAVRHWGGEVHEIGIMFLVFMPVPYVDASASSAFRSKWQRAGVASAGIVVELFLAGGAALLWVQM
EPGLFRAAAMNVMLLAGLSTVFFNGNPLLRFDGYYVLADLIEIPNLGTRSTQHLQYLAQRYLFGMKNAVS
PAMARGEATWFTVYGLLSLIYRYMIMLTIMLLVAGMFFEIGLLLAFWAGVLLLIVPAVRGIRFVLGSPRL
EGHRFRAVTVTMALVLAVVWALFVQPVPSATIVSGVIRAPENARALSGAEGFVEELLARPGDTLAPGDPI
LRVSNPLLDARVRQMEARIEELRLRRFNALINDRVRADMIAQELALAEEERALAVERRGEQIVTAPVAGR
LLLPAGDDLVGRYVRKGEELAWVIGSEPGIVRVVIPEAKIDLVRRNIEAVQMRLTSAPLEPVPALLTRGT
PAAVPVLPSAALATEAGGPIAIDPTADKPLTPVGTVFVMDVEPTDERPLTALGERVSVRFDHGSAPLGTQ
LLRAVRQIFLRDLNV
>gi|56697557|ref|YP_167925.1| GAF domain-containing protein [Ruegeria pomeroyi DSS-3]
MDSRSNFETTAGPGERGQEPAQVSSVHPDEQTALAAWTDQLCKRLNADIVVLALGPRDTGPFQLAAHAPA
EAEPGEGLSSAVDLTIAQRKPIVKSGYQEHGKTCCAVGVPVLRDGALFGVIAVQLAVRADLDLRRVVDEV
KWALPAMELRLVVRDLNEGALSQARARAAVELLAGALDEPRWSVAAATAVTDFCDRLACDRVALGRRHRR
RSKVVSLSHSGNFQRSSELVQRIADAMDEAIDQGEPIRMPQDSDNTLTLTAAHQELIHSGVPRAVLTVLL
RRDGRVTGAMVLERGGNNPFRDEEVELVEAVAGILGPVLEEKRLNDRALPVKVVAEIGRFGAAVLGPRKA
GLKAAILLAGVALWFAWTTAVPFHITADARVEGEIRRVVASPLDGYVASAAAIPGDIVAENDILATLDDR
DLRLEIARWNTVRAQRQREYETALADRDRAAIGITATQISQAEAEIALLEERLARTQLRAPFDGVVLSGD
LDQSVGAPVSRGQVLYEIAPLDAYRIVLSVDERDLALVGEGLAGEVILTALPGRTFGVETGRVTSVAGVE
DGRNVFRVDAQLPEQTNLLRPGMEGIAKITVDERPLLMIWTHGLRNWARMAIWRWLP
>gi|56697558|ref|YP_167926.1| type I secretion target repeat-containing protein [Ruegeria pomeroyi DSS-3]
MAPKVISSQKPRFCLSFLALIGVLPRDALSNEKQMKCRGQGGFVAMSFPFIRGLKIPGSRRDSRSLFARK
SGTSGRKVHVEQLEPRLLLAADFAVSMADAMQVDTAALRLEGFQSESGAALRALNSSGAQIAQAFGGVDT
VPLSSQIRVISTEKDDRIEIDALSLFEISKQSSNLPLFEVEGGEGTDTLRVVGGDLENGLRTYTDWHIDD
VTEEGASGVASVTLRDSNDAEVATFDIAFSGIEVLAGTQGDDTFYLAASEMRKGITIDGGDGDFDSLVLD
GSYSSVSYQAATANDGQILLDGTALVYLGLEPITQNSASDDLVIDLTDYDDDAVLNSFNAGTMYIGTTGG
FTPTFENITFVNPTNSLTINLKSGSDTLTVESLSANWDASLYIYGEYEGAETFLGDSGEDDVTFSGSIDL
GSSGSMQVIAETITVNDNVSITGDTSEDGFIEFRSRRLGTAELENLSPIFPGIPKYAAVDIGENASIEAG
GVYLIAQAEERGYAEQLEISSALDTNLVGPLLGQVTSVLGLPFQILVKKTDAKVTVADGANIVGHSAVGI
YANAVTNASGSAGFSIASLGWADSTANADVDIGDANIYSDGFVVVTSDASSTANMSVETNTGLGTVPTSS
SSQVSLSLAVARSTLSSTLTVAEGATIEAGLTANLLAGGSVDSQASATSGLFASGAAGAALAIELSDADV
HTNIHGTVISRNEPGAVVKLEFDPLAAPGERGYVDLENNRIFVGPNALATEDTVVYTSSRGQNIGGLIDG
ATYYVLKDSADPNYIQLAKFEDSVFRGDAVDLVEFNGTASSPLYPATNNKSFTGADVDSEKGEIKLSNGA
LTGSGTDFTTLDQTYPLGQAVIYEAAAGSEIEGLVSGNTYYVITGTNQFNLDGGARSFYGADGQTIQLAE
TENEAYAGVAIELGNVTGDDFTLRAAHILDAGFATGVGIGAKLEVETTTEAGAGLSSADSNGSNSPDGYN
LNDSALGNIFSSMMGRISTESSSNSAMNSAGASPNSLSAAVALAFAYNDHDVSVNVHPTARISSGEDLEV
KAEIEHLNKAFAQSSTEPQEENETGEQSAPNTISAAVILTITDNDAQATIHGGAEMDAKRATRVIAGVTY
PFAQTLDQFLPTTAGEVVDMFKTEGYGAITQYVDDTFGLSSFLNTWSSSTSKGDNVSVAGSINFQVQDTT
AIATVKDGALINQDASFNADETDPYFGQEVVSVEATSYMQQIDMAGIFGWSFGSLGLNDLYVSSSGASFD
GGTPFDTESPSVAGNSGGKGGIGATLYVKLVDNTTHAIVEDNARIFTGRSGGFNMKAEEALFNLGFAQSG
AASDSGFGVGGTISVIKQNSDTLVQLGNRARVTGEDARLYAGSLDTHIGITGGLFLGESVGVGVSIAVND
VTRNTRAVIGPEEPDAEASYTAASANYLDLDGKLSVRAINDGAIWGFSIAGAIQSNEQHPDRSDDPLDGV
SLGILFGDTPVENPVTTGVGISGSVALNFVKDTTRAAITDAGQVKAGSLEVTSNNETQVVSVSGSFALAV
SRGQTGNSGTQTGVGVAGAVSVNTVSGDTEALVLGTDFSITEDPDPNDSSVEATGDGGMIIDAFRVGDIF
SLAGSLGGAVTTSQSNSTISAGVAISVGVNLLSGKVRSYMSDSDATVYKGSSQVLATAAPDILSISGALA
FSYSGGVSGSSTSAAVGIAISVNEIGTEDEPFEVIARVHDSVIEVMDGDITVKADNQSEIENYTYGVALA
ISNSSGGSSYAFSGVGSVSVNNLHTVVYAEVTEDDNETELTATKGAVTVSAKENAKIDADAGGFGLALAL
AGSGGGGFAGGLGLSIAINDLSSDTMAIVDGAAITAGTVLNTGDDDVVIQADLTAEITALTIAGAGTASQ
GDAAIALAGTGSGNRLRIRALADVDGATITGGDKGIRIEGGLGETSKIKADAGGVGIALGLSSTASVSLG
IAVAVNDIQGLADVTTPDVGATVNGSTLTTDDGALSIGAISGADIDTFVLGVSVSANIGLTDSTAIGFSG
AGSVAISRIGFDTEASLTDSSFTSSGGGNATLLAQDGSTIDTFALAGSFTLAVASGGTAVAASIAASVSV
NEIENGIVARVSGSDILTRGDVTVSASTVPTTSQNAQDQLAGIADFDYDATEDATINAIAIGVAGAVAIS
PGDASISASLAGGFAFNDIDNTIVAEITADSTVAGVNDGDKVGKVDVLAYDQANIFASADGGAISLSFGD
PAISIALAAFVSVNDIDNVVTARISDSTVQARDTISVHARSTASIESISVGAAASISIGQQTAIAISGAG
GYVANTIGNTITAEIVDSTDSTGVPRVSGGAVDVYAEDVSTMDGIGVAASLAFSVALNLKDGVSVSVSGA
GAGVYNTLNSTLDANITNSTVAATGADEDTEITDNLSGDVRVQADSNVTFDDTTVAVSVSAAISLISITV
NAAVVIVQNQALGSVTASIDGSTVNATGDVTVDASDDTSLDSEAIGVTVSISLAGLAGAGVAIENKIDRD
VTAQIVQASTVTAAADVTVDAYAEQNVMKSTGTAASIAVVPISISGAGVSAEALVNSDVTALIDGSTVTA
SAGDVVVDAQIDTLAYATAQGGAFGAVSISVMLASAEVTGLVRGGITGTSIVTGRNVRVTSVSNATADVS
LISVGVGLLTGAGIGAAPDAEEGASGNVMVSRSVEALIGLPEGSARQTVTANGTEEGSGKVEVDADATHY
ADVDATAVTVGGGAISASLSGVNISGDILAIVDEGAIITARALIVDADSYLDAYAEITGAAVGLLAGAGS
NAVATITGTTRATVGADRDRASSTVPTTLTIGAGGTTVQAVSEAFAETLSDGGSGGGLSITALLASTTIN
TDVIANVGQSTQITGGALTVTADAFRDADSEVLAAGVAAITGSGGSADSAIMGETSASFGPGDGTTPGSN
AAATTMINGGDVTITAIENSDSYAYTHGGSGGAIAIAALIPTAYVTTTMEAYVGAGTDIGADNLTVTANA
EQRKASVDLLVVAVSIAGGAGSTGTAYVGSADNSAYSNADAWIGDGAVIDLTGDLTVKSITSFDYAAVDG
DVGSGGGLAISVLLSDSDLSSGSFAWIGDNVEVTGRNVTVEATSQAGTFSDVLVGTGALIGGGGAQTSAY
TYTRTAAYTGDGASLDLTGDLIVTASNIVGEAKGKASAYGGGVILVGASVSDAYAKNDVEAFLGDNGVII
ADDVTVGAVVEDGNANPPSNTLTMDDSNNTINFERHGLQEGDAVALTGAGSANGTYTVMEIAGNSPDPTD
NFRFGAALTVDASESFLATAADLPVIGVSAAISQVDAGTDQITFISPHGLATGDTVSSDAATSGMAYVRA
INDFVIELYETEAQAQDTTSQNGLLDVEAPVGVDAAADRIYLGASSDLYTGQLVGYDPGGAAAVAPAGQL
YYVRVVDANLNAIELYTNQSDAENGTGTPVNLTASTGTHLIYQAAPEGAAQVDALSDTIRFAYAHSFKDD
MQVVYKPSGAPISGLTADATYQVRVVDEFTIRLATSDFNPSTDRLTFSGGNISSGVIDPATMPFAANDLV
TYSNTGTTKRFEASFVDLQGSAETPDTNSSGELLTTDNNTIYLGTDLNRDDVYEGHGFANGDLVVYEVEN
GGTPVGGLISGRGYYVIVVDAYRIQLAETYFESVGYTDPNDSSNNIAITPIALTRSASNDAVQSLTRAAD
LPIIGLDQGTTYSVTSNGGALADGFVLRDASGNTMSFAGTVNVILANGSVVVQALSNANRLERVEVNLGA
PVEGRHEFRVILDALPGNPTDATGMGLETTEGRDIREAVLVAFDGQTKAEARGGGGAGIGFTFPVADSGA
DVMAQAYINADLVRARGDVTLYSLTDTSLDLVVSNIAGGLLSVQNSDGDQIATSYSTTAVGKLTRITGGT
TEGTSATILSIDSAVTELTEVQAQDVTIEAAGNYRQYSQLDFDHTAEVIADGGGLIAGAGAYVENDLTAR
SNSVIGDGATIDAETVDVSANMGIFDNPTSSSLSGDLTMDSYARAEAGGLFGGTRAESDSDFDYDSAVLI
EGSLLAGKDQLTDGTLIQGRRGVDFEVNRASYSYDSDYRAVFWGIGAGTGETFGSASTRTVIDGDAGATI
FAAPRLIGGENVHVDNVPPSALNTYPGYNDLAVYVSVTGDLIEWDSDIEISAGPSPELVVDASGDVVRAY
NVRLLNDSGAFVLPEVGSDAFSDFNGSDQIVVDDIIAANLGSVVFNAPLGSISQENGNFDGKHWAELRVL
RGFGEVRLTNLSNYDLVVNRIDMIAEAGHARVLLVDLDTVESAMQFSIKENYGNALIDIRNLGAGNIVLA
GSNVDGASIENPLGETRILNTGGDILTEGAVIRTNTMGDADLARSFRDTEFMSHTVAELEVTAQTGASGA
VELVRTDGGDWSAMGIGERGLIRVGDEVHQVAEVNGDRLTLTRASSITAGTATRIVSLFHGIEATSGDIG
LDGTAIKVDLTRVASENEALYAASGDSIWMDLGLRLRTGDTTQTTATVAVGIVAAATEASLALRSAVRED
VDGQSQGVLVTGDTGDNGTYYQFFYDDPDTVNRDLGPGAGYSATATELAVTTWDFDLIEAGSRITANGTD
PDGSTVRAPGDNTVRIVANTNIRQGDTDGDGAHYIDAATNGDVVLTEIDAVLSGDLDDLRVGRIDSSAGD
VTLEAPRHILDSDPTDGSPDPWDVGGVNITMTARTGGVGTDADFLETNLVDSVLNVSQSGVLTADAQRTI
RITETAGNMRVNTVDSELGDVTLTTRAGSILDSNSGAGEDDNVTGRNVDLLADGGSIGLSSDDFDIDSGI
LGDWSGVVTADGDTGVYLTETANELNLLYALSTGGAVRLTIPDTPATPTLPASPYGHAQVPRILPRDVSS
PAEDLYLLENGTRLVVQNAVQSFDSARVDAFNTVDLWVGDNLSMEANSLVIAGQTVTMQLDTTRTGASRS
GTDADAGYGSNAELTGTIQTRGNQNGDQFLLQSGDDVDIITVNSLKLIAQGFIRTAGDEDEITVNTLMTM
DTYRDNGYRDTLDLDGAEGTDVYVINTTGTYGEERDYLINVLDTGAPDDGTDTLAITGSTGSDLFLLREI
TSIENRTADRPSFVALMHANPNGTDTSLDNAIDQAQTSSDRPSNVQRVNYDRAVNGRLTVYGLEGDDMFA
VDGNSTITTLDAGAGADRFQIGQFHGVLDANNPEGAAFHLNAAPGDEPAEIIRTTRGYITAGPSQSLVAK
GGDGGDTFTVYSNKAEIRLEGDAGNDIFVVRAFALADENFDPILDQYSVEGRNIINTGTGEDQVTYNLNA
PVSIDGGAGYDKVIVLGTEFGDAFVIREDGVFGGGLNVNFENIEVLEVDGLEGDDDFFVLSTPIGVAVRI
VGNLGSDVINIASDVTEQISSAGLEGQSSVINHDVLSDGRYEGLSIEGVEMTVAGDGSGPVSIRELDENG
DEDGYSVVREGDFGDRYEISLNEAIAVGTRVYITVSAARSSDDEDAWDPTEAPRILLDRNNDGLPDEGDS
VLIGASEGDYFDTVSVNGTDEQVPTRDVVLVFDSTNWSDAQTVWIAASDDSLEEGERKIVISHSVQAINE
NGADQDAVDLYDGLAVRNVEVTILDNDQADVILTHDGTDTRVLEGPDGFTDRVGISLSRAPDPGETVTIS
LAELFAPGTDAQLAFDTPTITFDSSDWDSVKYVTLTAIDDSKPEDPRGLQIQATVTSTGGAFDDAASQVL
GVKVLDNDTPGVVITESAGDTLVTPLADDDYTIRLTSAPNAGEVVTIPLLTDGQASIVSAIDTSDNSNRL
IRDVDVGTFEVAEFFDGPVTFSGDTITRTDLGSFVDANLYVGARIAISGSTANDTGTEEYYEVIAVTDTS
ITLAGASFTGGADTNVSLGEVSISMLFNGQVIFGDETVTENGVTVDGDTITRTDGDSWYDDGFLPGHEIR
IDSGPNAGLYQIALVEIDDQGREFLRLTSSGSLTVGTGNVRVVRVADAIQFDDSNWATEVQITVEANQDY
TLPVYLQNKMSFSSVHRLTNIQGPVSVEGGATGADRTLIPAIILPGETPGEAVDIGPQPDEFAQIDVLNI
FDDASQEDKSGVLTPTGLTGFGMALELNFEETDFGEPTTVPGGISWGTQVVDTSGNFVTDPLLSSIEILN
IMMGKGNDALRIDGTLQPTTSGQGGETAIHGGLTMIHGGGNRTEDGGDLIMVDGGGGSESLLVIYGDTSQ
DGLFYSGSGENNNGHNFGERPFPPFTSEALADIRASFVMPLADPFLIAGKDEILVFAELAGEMTFDAAAL
TIQATSSWLDAGFRQGRAIEVELTNGATASYRIAEISADGLTLTLEDGAVLPDGLRQARITAGGGAGKVT
AYGGGNDDLIMGSREGDHLAGGGGNDAIFGQQGVDQIWGDSGFNVDIFGDLTLYNDDTLTNAEKRALAGP
ILTIPVAGALISEAGDAMIVGDDSVFGGMGDDVVFGDHGRIDVTEPPLRIRTTAYEYIVTIASSEIDNGG
DDLIFGDAGRDILIGGANRVVQGVPNGDRIDGGTEQDLIFGDNVTLAQRAVGQYQDQDARIVRLTGSTIY
NRDGSANVDTVTLFDDPRHAGSPWTAFEITELYHDVAYQARNDGQFGNDDIAGGASHDKIFAQLGDDSVQ
GDGAILDLAVSATRDADGTLVHVPSFEAETDGDDYVEGGGGNDLIFGNLGQDDLIGGSSSLYTLVTPEQR
PDGSDVIFGGAGTQIAIDILGTDANSMLGAPSEHGRDADVIVGDNGNIFDLVGGPNVWLIYNYDRTSDIG
NNTVDPSQVHLRSDIRLIPRAVVQLDYTPGTDVGSLGASDLVYGEDGDDIIYLMTGNDVGYGNGHDDQII
GGTGDDRIFGGTGEDGLLGDDGVIRVSRNGLAEPLNGISAEAQRTLSIPGPWIGAEVDLNGYLKITVDAI
LPKEGGNDIIYGGLGDDFIHAGAGDDAASGAEALPIFHNDTRPIANTPMLYEPDSGILTEFYDRTTGSYQ
TFYDPDDPRPIIENYFLNFRTFDDDGNLIEDGKDAIFGGDGNDVVFGGTGHDRMFGGWGDDYLQLDDNLG
TNGGRNDTSDSAVSPQTTGGAADFAFGGGGRDVLIANTGTDRMFDWTGEYNSFIVPFSRFGAPTVNRLPS
PHAVEFLLDLAEATGAATSRAEAYDLIAMVTPQDPEWGDQHGAPRDPQPGNGRGAFDSAGGPENDTVRVP
LQTAAGSTPSGPAEPGTIEVGLQIEKAINAADPWSPTDAEDADTAAEAVVLSVGTDVIWTYLVSNTGDES
LHRVSISDTASNGGRFTPTYVAGDANENRRLDPGEVWLYTSEGVGDHTVVAGPYSNVATVTARGSRGATP
TDSDGNHHVGVVVTDPPPSVTIEKAINALDPFNPTAAEDADTGPGPVLETGSAVLWTYLITNDGAVSVSL
DSIVDDAGTPNDTSDDRTPVYVSGDDGNGMLDPGETWLASLGGVAADGAYVNEVRVTVSDSYGREATDTD
VNHHTGTRVPGGSSVTLVKAVNAVDPWNPTVAEDANALNGPELVGGDAVVWTYLVGNTGGGALAVGTLID
DAGTPGDGSDDFAPAFVSGDANNNGLLDTDETWLYRAVGIVTPGDYVNVAIVTATDASGAQVTDSDLAHY
HGTPPPGTPAISLEKAVNAVDPLEPTKEEDADTIPALVRAGQDVTWTYLLSNTSDVAVSVVSLTDDAGTP
NHASDDFAPVYVSGDDGNGLLDPGETWLFSSMGIAPEGDYENIATAVAVSASNQQVSATDNARLTGVADQ
VKLVKAVNAVNVYAPTELEDANDAPGPLFVEGTPLIWTYLVTNEGAGEVVLDKLTGVIDDAGTPDDTSDD
FAAIYVDGDTDNDGMLDAGETWLFTSEGAVDASATTGAYGNAAAVFAGEDRSITDTDLAHHYGVDQGEAA
GLTPGFWKNNATQHGASAWPTTSDGTLIYDPQQTLDTVFDIPVSYAHLADVTLVDALGLTGGGENALIRH
AVAALLNATSVLVGYPASAPQVIAWTNEALASGSRAVMNDQKDMFVDWNELGADLDQHGRSQSYLDIVTQ
SKIYVPWLLDDLSTPETSDYLVYDDETSTFGRPPAGGAPHFAL
>gi|56697559|ref|YP_167927.1| SapC protein, putative [Ruegeria pomeroyi DSS-3]
MPVQQLFYKTAVPVSAKRHGDLSISSGKTYAFARHTNSIPLTALEFGPAAGTHPIVFAGTGEDVVPAIIV
GTREDENLAVDADGNWQGTYIPAFARRYPFIFSLDKDKNQFTLLVDEEFEGANRDGRGERLFDSEGEQTG
YLKSVLKFLQDYQAGFARTQAFCKRLKELDLLVPMQAEFSLGAGQKRTLGGFQVVDREKLKALSGEVLAD
LCRKDELECIYLHLSSMRHFRQMLERANTEASEAEPETDAADVAEPMAET
>gi|56697560|ref|YP_167928.1| hypothetical protein SPO2718 [Ruegeria pomeroyi DSS-3]
MRTAIYFAAALAAAPCSAQVYDCVIDPSETVDVAGASGGVVARVHIEPGEKVERGQLLAKLDSTIQSATV
AMLRLRADDTSEIEAQKTQLAFLEARLGRTQELSTRGVVSREVLEEIQTAVEAARSVLIRVELARRLAME
ELKRAEAVLSLLEIRSPIDGIVLERYFDDGEYLPLEGRFATIVQLDPLDVVTFLPVAEYGTIQEGDMAQV
RPAPPVDGVYQAEIQRIDRVFDVASGTFGLHLRLDNPDLSIPAGHRCKVAFGSEIGTSSSD
>gi|56697561|ref|YP_167929.1| hypothetical protein SPO2719 [Ruegeria pomeroyi DSS-3]
MSNGAWTDQENDLIVADYFAMLADDVSGRPYNKAEHRRGLLPLLNDRSEGSVEFKHQNISAVLKGLGEDW
IPGYKPAFNFQMTLVDAVARWLALNPAWLGRHSGTRAPTGLAEVRPIWIGPPPTLSNQPPPQELEQMLHI
ARKFDVAARDERNRALGRAGEERVLAHERATLKSAGRDDLARNVRWVSEEDGDGAGYDIASFALDGSPRL
IEVKTTNGWERTPFHISRNELAVAEARRSEWSLFRLWNFAREPKAFELHPPLGAHVSLTATTFQASLH
>gi|56697562|ref|YP_167930.1| hypothetical protein SPO2720 [Ruegeria pomeroyi DSS-3]
MRLEIRHLAAGSDDPAEELLNVGVHLVVGGAAHPHVVVHTAHLFVGCMFGRCLPGPRLKRLLDGISDRLF
RLGHLLVHPHMGRQVFAQNDRAGGRHHRQDEHRAEVEDHHAQEDKLDAHRQPGRLGGQVVEGFTMRDQTF
RRRHIGGIGSHAYLDGTLAILDQRGKLAVDTGTFRRNLVQHVLGSRGQACTGIDLPEALESDVDFGDPRL
DGLALRLLERRHLVGKRICVAFAPHRIGTIAAGLPKAFGGSVLIVTGERAVNLAEVGQKRRTFGRQRFEL
SGDSRLRHHRGLTCIGNDRGGLAVETFDLVAFGGDHAVDPFGRGHCQGPVDLARLVLEVTRRIRPEERDI
EEACQRQRHDQRDGDPQQQMHRPGQQGFVSFGGEPERLRQFAARVRPNPAQHGPVDGEDDHPRKDGPRQV
DEGKAAPRDAKGHPPAQHGQQADQDQRQAGKPHGLDFVVRRSREFFIARPGKPSSETALEGELPGRARSF
VVLASNLNGHP
>gi|56697563|ref|YP_167931.1| hypothetical protein SPO2721 [Ruegeria pomeroyi DSS-3]
MEIEMTDDPTNPKKSMTPHRLNMNDEMSTSITNAIDQLATDGSLYTRWRLRGVRSREALKLAESALKESM
AAKNRTFVVAVGLAEDLARKLLLSDALRNTEAVEREITHTINDALRNFEGLVTQREQAAYMVELERIAEA
QRLLDAGKLSQQRFEQLVKSINDSTDKIVLGVHETTREILANLRARFNSALRQLGEAA
>gi|56697564|ref|YP_167932.1| hypothetical protein SPO2722 [Ruegeria pomeroyi DSS-3]
MMARLILFVAAVVLVAMLLTGGFREGPLGPSTTASIEALEADPGQWERKQVRVTGTVGQRIAVAGFGGFV
LTDEAGREILVVGQANPASPGQPMTVEGQFVTAFVMGEMSMPAIIVGAD
>gi|56697565|ref|YP_167933.1| hypothetical protein SPO2723 [Ruegeria pomeroyi DSS-3]
MMMMPVPATCGFATASFMAVSTDLSGVGNMTVEQSPPAPLDHSGFAPCKARDSLRHGCDMDRAIIKKGSD
QEHNEHHANRSRHRSLVVDDDRFGLKEYEKIYVRMPAATNKADVVMHDLHAYSGDAAKGLLVPFNPSCAV
YGASPLTKETANRTYRMTAMNDFSGRPEQPPSESEVQAFVSEVKKYHSEFLRAYCLKKDQRLDPDKFTSD
VLNSVQRRYFDTESFRVEVSEKGIRELRNIRYFWGIVRNTFREHQRKHYNAMPRETTLSETIWLRLLLCR
EDGTVFPLVRSGMSLEERRWLEKLGGKKMKKVRRVAAPRGSAVWALDEAKAPLTLALTARGEGGGESDLE
KLLARRYIEKVPVADPAQMWKSINGVPYGLRLSSLGRSYIEQLGTAATLISIHARGKDEEKVLADGIDRP
QEDLDDYYSTSWYVGLDLSLNDVLAVAVERLGMPKIHARIYLLRKVGDPPEEGKWPRRRIADAVDLHPRK
VERIEDAWDEHFKNPEVHELMRKILSRD
>gi|56697566|ref|YP_167934.1| hypothetical protein SPO2724 [Ruegeria pomeroyi DSS-3]
MYRGPLKSGAGSAQSWLPRKRERTTPGCSCLLWNGTKPLDDRVAIAEDQSVPPFREVEILSKSWLHDQSI
AFAATLLGEVDISLEARALAAAEFIAASIDRFSNGLVSDSTLALVTTIDRDYCDAEKLSFWGFERLPECA
AALEEAKKVAQAELARRDAVATRNLNRMLISHAVYLLKRPHLPAVRFLTWLNRAVPASVPGVKRILRDLQ
HPDSPRREAIEAVLQKVRDTTLQSRDRLDYLDELHELVLSSAFEQRDVAVVWWTRICMAYRSSLFCWPLL
AEQGPSEQDGQSGSRSTRLRGLSLPISLFVIEDGKSDWKPRPNPGGQKIWFKYKLSRKEESGHKEPRFRP
PEGRLPAHINGYLFGFTADWWQAFNVGLDVAKKLWNSQNGRLRFADPVAAEQKLKASLNVDLRAACDIVD
TVLSKVSDKEWQGQNEETQFFTVSDRSAEAYWVQCVLSLMLPSGDLPMGVCTGTVNYRNNEYEIGIVEGV
AAKLEYANRAGFPRAIVPGVSRDYYDADPFSDDEVDDDAEKKSDPADIVGVSPASADPGIQPEVSNLPEE
STKEERIKRELKDFLGRLRVAGSRKTIEVNFALTARAAADAMQPAGWRRTNFLRTPEFQRMFSRTQRRLF
MRDALRDRTMSRRLKRSDVMAYQENPWRSEEEQRLERLDSELQSRTGRTVKHITRETIRKIVPGTSVDEA
LGAWAAWKDNQVRSGTGNDYRGPGLGVVTLRTAEGDTETRVWTALAEILVADEVWWERFQWADLPQSADL
LARLLCNHHADPEICEESAPDLLFVFDDRGFATERTNQIFPSEFHHQFIDLLNPRLRTNNKFDYLDAALK
KYSQGDRELETRVIVVLSEDAPIAEAPLLDDIELPDTQRKLLECLAIFRFGCSRHSGFSMANFDTARDDQ
LDWPSYEAVLSGLRRRRLIAITRNVIYLTRMGRSLVGAGTLTADPMRQALVHRQAALSLCPILSPAGARI
ATNRDRQLEPENVLEATWHLEQAFRLVPWRFRGLIAPRDGLPSVTDSQALLTFLRTMPDWDTVKRLRVNT
ATRAESVELCHELLKSQKDVLQHEPPSLVVGLTIETMGRVFKNEVQRESSIEQKVTEIVTLVDNAIARLK
EEHLSPTEWRRRLRHLLSRQLFALRMLGLPLNDPILAPARSYIDTAVTEILKPSFLEGLGAGREGLDDFP
ISQDCWRMLWSDGNRGSTPNQTLTLVQRSRYAYAAARANLSKIRSDGSGRDSWDEPWIAYFTQARPEDIE
PKQIAAPLNTWWSEYGVTEEASQAFGRRVLDMQPHAQKTKRGEWRERWLSELDTASGNLWRYVVADEKAA
RLVGAPVAPALRLIRVLAVQEVLPAWRFVKDAGPEWLQRWPVLAGTKPGPHWPPTANGSYGFVANEWSAL
ARAVIGHKTGWAAMLASLRLLPDNSARLALLQSWLSCCRSLGINTLTGRDPENLRQLGHGLEISGDFGKH
LYFAREYVARFLDVGPVGADLLQDPDDCALLRDFVSQINQFMA
>gi|56697567|ref|YP_167935.1| hypothetical protein SPO2725 [Ruegeria pomeroyi DSS-3]
MESGWMDTALARWAALASASTIARRIDRPNDK
>gi|56697568|ref|YP_167936.1| hypothetical protein SPO2726 [Ruegeria pomeroyi DSS-3]
MSDATTHLLLPYILAAQAQKHVSHNEALRILDGLVQLSVLDRDPTAPPGSPADGDRYIVASGATGDWAGW
DLNIALWTDGAWLRLPPRTGWRTWVEDEAMLLVWTGAAWEVVGEPSDISDAVFSLVNDADPTKKAVFSLS
GISTGTTRSYTFPNTSSELAILAGTQTFTGNKTFSGTLTASGTVTVSGATATIGTATGTATYGLGTGATT
TGLTKTVNLGTGGASGSNTVVNIGSASSGANGTTVVNTPTVTFANAVTQVGMPQANLTAQLLGLGGATAD
SYNRLSVNTPAVLLNNAGAGIEATVNKAAAGNDAAFAFKTGFSARALIGLLGSDDFSVKVSPDAIAFYEA
IRIDRTTGRVEMPEPVVLPALDAVPTPPPTGKLALYARDRAGAGWLDVQRPSGRFFPLQPHFGVNRIATW
APSTGTTVNTDGMPRTAVGTVATPTLATSNLSTSMRRWRVTSAATADAAAEERSAGWVCWRGNADGLGGF
TYVNRLSLVTLQVTGMGFFGLYGSTTALATTLTLSAVVNCIGIGFQRGTHTNWQLVQNDASGAPTLTDRG
ASFPVASTTNVLTLTLLAAPNSSEIGVRVVEEVSGAVVEVMLDTDIPAATQLLSPRNFMNNGATTAAVAY
DCSGVYVETDY
>gi|56697569|ref|YP_167937.1| hypothetical protein SPO2729 [Ruegeria pomeroyi DSS-3]
MNTADPDKVIAAARSWLGTRYHDQASLRGVGCDCLGLARGVWREVVGPEPFPIPPYSRDWGETGPREVLA
IGARRMMIEMSPADAGPGALVLFRMKPRAVAKHVEILTGPDTFLHAYERLGVIEEPLTAAWRRRIAFAFL
FPQR
>gi|56697570|ref|YP_167938.1| hypothetical protein SPO2730 [Ruegeria pomeroyi DSS-3]
MMTLLEAPVRAIAEGDAFTIRAGCDKRIETCGAKFANTSSFRGFPHIPGQDAVLRYATKDGGHDGGVL
>gi|56697571|ref|YP_167939.1| ISSpo7, transposase [Ruegeria pomeroyi DSS-3]
METLERQRGLRPDHGGPGHRKRRAQDDHDRRDLSQGTPHCVEPVREKGGRGRQIGRTKGGMNTKLHAVAD
AKGRPIGFFMSAGQVSDYTGAAALLGSLPKAGWLLADRGYDADWFREALKDKGIKVCIPGRKSRKKAVKY
DKRRYKRRNRIEIMFGRLKDWRRVATRYDRCAETFFSAIMLAATVLFWL
>gi|56697572|ref|YP_167940.1| type I restriction-modification system, M subunit [Ruegeria pomeroyi DSS-3]
MTGATLAKLTLEKLERHLFAAADILRGKMDASEFKEYIFGILFLKRCSDVFEQQREKILKEQRALGRSET
EALQRADHPSSYTKTFFVPPVARWDRLLNDVHANVANELNKALEGLENENHNALRGVLGHINFARKVGES
EIPDERLRRLISHFNKYRLLDEDFEFPDLLGAAYEYLISEFADSAGKKAGEFYTPRGVVQLMVRILDPQG
GTSLYDPTCGSGGMLNQGYEYALQHDGRRLSLYGQEDNGAVWAICRMNLLLHGIPDADIRNGDTLVDPKH
IEDGHLMRFDRVIANPPFSQNYSKRGIQFGDRFRFGWCPTTGKKADLMFAQHMLASLKQTGKMAVVMPHG
VLFRGGEERKIRIALLEEDCIEAVIGLPQNLFYGTGIPACILVMRHPDGKPDARKGKVLFINADREHREG
RAQNFIDPEHIEKIVSAYDAFADVPGFAAVIDNTAIIKDEAGNLNIRRYADSSPPPEPHDVRAHLHGGVP
KREIESIRPHAQAQGFDVDTPFVDRDTDYAEFADAVEKRADIRAQVESNPGVATRQGEMVAAFDTWWSSA
RTGLAELPETKRLMPLRREMLDSFEPAMLPVGCLDRYALMGSIAGWWDEIRYELRVIVENGFAELVDGWV
ETLRSALEDEDADDDEDSDAKKTVKVTLEELLAHPFVRHRMADYVTELSAAQAEVERIKAEKEAWETGDG
VEGAEDWLDGAEEGSNLAKELEKRRKELRAEMKDDDKRRKELVKTTGTGKPSKGSIDWMRAQGMDVREFE
AELTAIEHRLAPLVEEAETIDAMLAPYEAIKEELKEARATLRRLKAAFVERLTAARAELDDDDCRELVLD
IDRERLLDRLERARVRRVGALVADLERLWDKYRVSLARIGSRRADATARLDGYLKELGYA
>gi|56697573|ref|YP_167941.1| type I restriction-modification system, S subunit [Ruegeria pomeroyi DSS-3]
MREDPTIRIGDLADGIRGVSYRPEHLQEDFGRDRTVLLRSTNIQDGQLDFTSIQIVPSYLVKPAQSVGEG
DLVVCMSNGSKALVGKAARYKGEYGAPLTVGAFCSVFHPKTESDSAFLRHVFQGEQFRRSIDIILSGSAI
NNLKNSDVEGISIRAHSPTERATIADILDAIDDAILETDTVIEKLLLVHQGLVHDLTTLGLSKSGEIRRA
DQLEEFHETDLGPLPHSWCVKSIGRMAKDLALGTAARGANDGQDQLRLLKMGNLGWDALDTSTCELIDVD
RVVHWKDALLLDGDLLFNTRNTPELVGKTAAYDQDDQRTVCDNNILRIRFPSEEMDGRFAAAYMANGRGK
SRLMTLATGTTSVAAIYWRDLRDFQLPVPPREEREEIVRRLQVSRDTIRREKESRVKLSNLREGLRDDLL
TGRKPVVAIREAAE
>gi|56697574|ref|YP_167942.1| type I restriction-modification system, R subunit [Ruegeria pomeroyi DSS-3]
MSQQDRLDELNVVERPLLRQLGVMGWTHVEGADEDPSTGRKDYHLLGRDTFQQTLLRDRLEAALRRLNRN
DDGSEWLDERRISQAISLLERPTSRDFIAINEELHDKIVRGVNVSGPDGEHERRVRFIGFEPGDENEFVA
VNQFRVDPPGAVGDRGYIVPDIVLFVNGLPLVVIEAKSPAVTDPIATAIDQMRRYANRRVPEKNEGAERL
FWTNHLLVATDYYDARVGSVTARPDDFLPWRSVKPVGIEQTRAAMDEVCGEIGKAPGTELVQQEVMAAGL
LRPQYLLDALRSFTVYMTTDDGVRIKVVPRYQQFRSVHIALQRLQEGKTRRQDGMSDRRGGIIWHTQGSG
KSLTMVFLVRKLRTIAALRRFKVVVVTDRTDLEDQLSKTAKLAGQVMRVARNADGAKTHLGRQEPDLVFV
MIQKLQERNGEGDEQEIVFAAENDEQPDAKGENLLPAKTDELRSGKLVAKIGERKAFPVLNESEDVLVLI
DEAHRSHTSGLHQNLLDALPNAARIGFTGTPIEEKNKKKTREIFGTYIDRYLLRDAEADGAIVKILYEGR
ELKADVTDKGTLDGLFDATFAGKSADEREAIKDRYATRARVLNAADPLKAKAIDVLRHYIVNILPNDLKA
QLVAASRELAVQYVDALNDARDEIVAAIEGAADILKDIAPEDAQEAGGDVAFLSTALPYLGAIKALEFAA
VISVDHNDLPHLKAWGGVSETKQRIERFKKPLSQDALAILVVKSKLLTGFDAKVEQAMYLDRAISGAELL
QAIARTNRTAGEAKRFGIVVDYYGVGKNLADALAIYDAEDQSDLTGGIGKPEDLLPELRQVRDAVVKHFS
DVGITLGSDLQAFVDACVAKLKDQKFRAQFLVLVKKLVGLFAALMPRPEARPFTRDVKIFAFIAKAAANL
YRDRSLDARGVAHKVQAMLDAFIAAHGIDPKVPPIEILDPNFAAEVARKPSGRAKAAEMENALRHHISIS
FEKDPAKYKTLSDRLEGILTSHHEDWDEIARQLQALIDEATARSDGGFSVHGLEPHTEAPIFGILRLRYG
NDDRDADLAELSAKIVQHLREESAVSGFWDNPVSQEEARRWIFQHLDNCSIFDFGDLDAIASDCMGVARA
NRAAFTS
>gi|56698720|ref|YP_167943.1| hypothetical protein SPO3899 [Ruegeria pomeroyi DSS-3]
MSETIEIDELVFSVKRSTRRRTVGVTVERDKSLVAHLPQGVALDVATRLIASKLLWVHQKLAEHGETARD
DVFRIPEFVDGEGFHLLGKHYRLKLVDVPKNVTGVPSVRFEGDRILLRREQAASGGKRIEEYYTRAAHPY
LNETVQRWKRIVGVEPGRFVQVMDLGYRWGSCSEDGTLNFHWRTMQLPPRIIEYVVVHELVHIKVPNHSE
KFWKMIGSVMPDYESRKAWLKQKGGEL
>gi|56697575|ref|YP_167944.1| hypothetical protein SPO2736 [Ruegeria pomeroyi DSS-3]
MKPRSINIFLLDGDPNGIRVAQISMSTIQAIAFRRNQLRRVREAFPEIERPGVYILIGADEDAQDRQLAY
IGESEGVGARLSYHNSNEAGRDAKGFWTDTVVLISKDENLTKSHARYVEACLIRGVVSNPRWTLPNTRTP
SDDAGKLPLPDRAAMDEFVDQTKTLVGALGWDLFREVRGRAPEQTAGRELPEAEIHESPRFFFRGEGFAA
EMEIGPSGDFVVAAGSRARVRTTRTIPRGTVTLRNTLVEKGVLREEGDFLVFTSAYSFTSASAAAAAVIG
ASANGRILWKLPDGRNYADWEASQGMSDCASE
>gi|56697576|ref|YP_167945.1| putative lipoprotein [Ruegeria pomeroyi DSS-3]
MHRKSPPARPLTRLPALGLGLLLLAGCEEGANLSLFQPKDKEAATSSETRSTKLVERDVEAPEVFQVTEA
GLWDGRPSLGGVWVAHPDVKEPERVIIRNATNDKFVIGALFRREREIPGPRIQASSDAAAALGMLAGAPV
ELNVTALRREEVQEEPPLDETIAQADAVEPLPEVAETTLDPVAGAAAAIEAAAPSPAPAAAPAPATPPKP
KAQASSLDKPYIQIGIFSVEANAKSAADQMRSAGMVPTIRQETTSGKSFWRVVVGPAQSKSERTALLKQV
QGTGFSDAYAVKK
>gi|56697577|ref|YP_167946.1| D-alanyl-D-alanine carboxypeptidase [Ruegeria pomeroyi DSS-3]
MPFTIRSALLALGMALTALPGFAYDTSARAAYVLDQSTGTVLLTKNADEALPPASMSKLMTLYVTFEALR
DGRLTLDERLPVSQHAMSYGGSTMFLNTTDRVRVEDLLRGIIVLSGNDACAVIAEALSPDGTEAGFARFM
TKRAQQMGMTRSTFANSNGWPAAGHLMSVHDLAVLANRLITDFPEYYPLFAETEFAFDGRAPSNVRNRNP
LLKLDIGADGLKTGHTAEAGYGLVGSARQGDRRVIFVLTGLESEARRAEEAEAIVNWSFRHFATKTVARA
DAPVAQAQVWMGAKQSVGLVPAEDLSLLLPVLSDKRIEAEVVYDGPINAPIAKGQQLAELVIKPDDLPEI
RRPLVAAEAVPAGGFVVRIKTAANLLLRQLNAGPAEAM
>gi|56697578|ref|YP_167947.1| thymidylate kinase [Ruegeria pomeroyi DSS-3]
MSGTGLFLTFEGIDGSGKSTQARLLAETLRAAGHDVVLTREPGGSPGAEEIRRLVLEGDPDRWSAETEIL
LFTAARRDHLERTIEPALAAGRVVICDRFADSTRMYQGLSRGDLRQLVDQLHALMIGREPDLTLLVDMDP
ETGLSRAKGRQGSEERFEDFGPELQQRMRAGFLDLAREYAHRFRIIDGNRDMDSVAADVTEIVLTHLNRT
R
>gi|56697579|ref|YP_167948.1| DNA polymerase III subunit delta' [Ruegeria pomeroyi DSS-3]
MTDEIPAPDQAPGAPHPRETPRLFGQDAAEQAFLSAYGSDRLHHGWLLTGPEGVGKATLAWRIARFLLAT
PPQSDDGLFGAPPPPDTLDIDPEHPVARRMQAGAEPGLAAITRSLNDQGRLRAEIVVEDVRKLGRFFGLS
AADGGRRVVIVDSADEMNTSAANALLKMLEEPPARTTLLLVSHQPSRLLPTIRSRCRTLRLTPLSPADMQ
SALEQAGAGTEVMPEHLAALASGSVGRALRLLNLDGLALYAELIALLDTMPRLDRPRALALAEVAAARGA
AERFDLLLGLIDIALARLARSGATGMPPQPEAAMGEAQVLARLAPDPDSGRRWADVAATISARARHGQAV
NLDPAALVLDTVFKMQDTASWGR
>gi|56697580|ref|YP_167949.1| TatD family hydrolase [Ruegeria pomeroyi DSS-3]
MSTTDTTPEITDSHCHLDFPDFEGQLDEIVARAARAGVTRMVTICTRLKNEPAVRAIAEAHAPVFYAAGT
HPMSAAEEPMATVEELLALARHPKFVGIGETGLDYHYTADSAEVQQRSLRVHIRAAQETGLPLIIHARAA
DDDMARILAEEYQRAPYSCVMHCFSSSPALARAALDLGFYLSMSGIAAFPKSQELRDIFAAAPLDRLLVE
TDAPYLAPPPHRGRRNEPAYTAHTARVGAELFGLDYADFAARTQANFDRLFTKAARFKAAA
>gi|56697581|ref|YP_167950.1| hypothetical protein SPO2743 [Ruegeria pomeroyi DSS-3]
MSDELRFTILGCGSSGGVPRLGGHWGDCDPTNPRNTRRRCSMLVERESDAGVTTVLIDTTPDMRSQLLDT
GTGRLDAVVYTHSHADHVHGIDDLRMIVFNMRARIPVWADGDTQNALLSRFGYAFVQPDGSPYPPILKMK
TIAGPFEVDGPGGPIAFRPFRVGHGSIDSLGFRIHDLAYLPDVAEIYDAAWAELQDLDCWVLDALRRTPH
PTHAHLDKSLDWIARAAPRRAVLTNMHIDLDHDTVAAETPDHITPAYDGMVIRYAL
>gi|56697582|ref|YP_167951.1| malonate transporter, putative [Ruegeria pomeroyi DSS-3]
MFQALIDVVLPVFLVIGAGYCTTFAGYFKPEHIDGVMRFTQGFAIPCLLFRAIANLDLNAGFDPALLASF
YMAAFLCFTAGLLGARLLFNRDWEDSVAIGFCCLFSNSVLLGLAITERAYGPENLVGNYAIIAIHSPFCY
ALGITTMEVIRNRGRGGRKMVTSVLNAMFRNVLILGIALGFIVNLSGISLPQIADDALSLIIRAALPGAL
FALGGVLVQYRPEGDTRVIVYICAISLLLHPGLVWLFGSALALPQDLFRSGVLNAAMAPGFNAYIFANIY
GRAKRVAASSVLVATAASILTVWMWLMLLG
>gi|56697583|ref|YP_167952.1| hypothetical protein SPO2745 [Ruegeria pomeroyi DSS-3]
MDVVDALGVSWVDFAVPRPTTRTMTETTALIVAHGQPSDPDPAEAALARFAARVAASAPGLSVHSATLAA
PGRLEAVLEGLPETVPIYPLFMARGWFVTSALPRRLGGRANPILDPLGIDQGLPALIAAHLAKELDQRGW
PLADSALVLAAHGSGRSRNPSAVANGFAEQLQSHLGLARLSVGFVEETPSITEAARRHGAMSLCLPFFAC
AGGHANEDVPQALEQAGYAGDLLPVLGELPPVPALIARRISEAGR
>gi|56697584|ref|YP_167953.1| hypothetical protein SPO2746 [Ruegeria pomeroyi DSS-3]
MMKRRLCASFVAASMVVVPAQRAAADEAAALIGGALLGGLIVNEVHKNKQRQRQQTQRRTYQSSGVSSAQ
RQQNREVQSALNYFGYNVGTVDGSLGRRSRSGISHFQSDMGYPIDGYLDDHERGFLLTSHQRALASAHVA
PYNQILASQGQGGLLRTYRNEQLGIQTPQGVQPVQPQTHMAMTAPQAVQPSQVVTARAATGAALPNFGFA
QPGPVSINAHCNEVNLLTTSNGGPSRPGQVREPVFALNEQFCQARSQAMTEASQIEVTIPNMTAVQVEQQ
CAGLAQAMAPQMVGIDTKAPSEVVAATSAFLQNSGQPMASLISGGKICLGVGYRTDNAEMALASATLLAS
AGQLGYGEVVSHQLRQGFGAPVGMARAGEWMRLALNAAQSGSGVLGQTSERVAVLNEASTSAAAAPAIPV
FSASTSGN
>gi|56697585|ref|YP_167954.1| diguanylate cyclase, putative [Ruegeria pomeroyi DSS-3]
MEDLAVLLERLCPMFVLLDRSGRMTRVGPTLQKLRPDQPMQGAKFLETFELLRPRSVATVPALMASSGAK
LHLSLRDEPRTALKGLIVPLPGEHGAIVNLSFGISILDAVRDYALTSADFSGTDLAIELLYLVEAKSAAM
EASRKLNLRLQGAMIAAEEQAYTDTLTGLKNRRAMDHILSRLLAGTTPFALMHLDLDYFKSVNDTLGHAA
GDHVLQHVARVMVEETRGDDTVARIGGDEFVLIFNHLQERERLDSIARRLIDRLEEPIPFNGEECRISAS
VGTVLSTQFARPDASTLLHAADLALYAAKRAGRATHRFYESGQSSTSLEPLERAATPRSQEEAGAGQGGA
RNLAS
>gi|56697586|ref|YP_167955.1| hypothetical protein SPO2748 [Ruegeria pomeroyi DSS-3]
MHGLINRAIQSFVCNTYGQSRWIRVTEAAHLGFVEFEAMLVYEDETSRRVLHELCLELGRPQREVLEDLG
TYLVSNPNTEALRRLLRFGGVTYLEFLHSLDDLPDRARLAVSDLHLPALELREESGGRFSLTCHAGLPGY
ANVMMGVLRAMADDYGALVMLEHAGARGKAEVIEITLIETAFAEGRSFELGARAG
>gi|56697587|ref|YP_167956.1| hypothetical protein SPO2749 [Ruegeria pomeroyi DSS-3]
MTDLDVAVAIRDRLAQAVAGTLAALALWALAEVWGRDILPERVWLCLLSLVLVHAGATLALAGPVGLVRG
SVISLWLSLPATLLTWSVAGRFEPASRLLQHPQLVLALVGFVFIALPFLVVRAEGRGRMFDYASLFAATW
ETALRFVLAWVFVGLFWGVLLLSDALLDLVGVGVIDLILEEAVLFYALSGAVLGFALAVIHEVRGRVSPY
PVLRLLRLLLPVLLSVMALFLAALPLRGLNALFGDLSSAMILLATAAAAITLISTALDRDEAHAVASPGL
RASTRALAILLPLPIALAIWALGIRVIGYGWTPARLFAALSAGLMAIYGLGYCLLALRGGDWTARLRRFN
VTMAVLLLVAAALWLTPLLDSLRISTASQVARYADARAGRAELPIWEMTHDWGHAGQVGLAQLRALAVAR
EDAGLIRALDRAREVDSRYLFETPELSPNADLVPELVARMQVRPIGAVLSEAELGGLPQHQLQIWRDGCA
RPLPDGRPGCVLMRGAFSPVAPAGDQAIVLYLDELGLVRATHLRRNAAGDLFLRPAGDPRQGDELAAEQL
LLMQALDGEFAIVPSGQQALAIGGVLISPRD
>gi|56697588|ref|YP_167957.1| trimethylamine methyltransferase family protein [Ruegeria pomeroyi DSS-3]
MVDTDTRKRRGGGRAGAAARRGKAVIEQMPWRLPVNTDRPTEPLPPEGVEAIHDGAMRILEEIGVAFYNE
EALALFRQAGCKVDGEIVRMGRDWVMEMVAKAPREFTLTPRNPDRTLKIGGNVILFGNVSSPPNYWDMEI
GRKVPGNREQCRNLLKLTQYFNCIHFAGGYPVEPVDIHASVRHLDVLYDKLTISDKVMHAYSLGKERVED
VMEMVRIASGLSDEEFEATPRMYTNINSTSPLKHDHPMIDGCLRLARRGQAIVVTPFTLAGAMAPVTMAG
AVAQSLAEALCAIALFQYVRPGIPCVIGTFTSNVDMKSGAPAFGTPEYMRATQMTGQMARFYGLPVRSSG
VCAANVPDGQAMWETSNSLWAAVQSGTNMVYHAAGWLEGGLIASPEKFIMDCEVLQQIQRYMEPETYATT
PDDIALDAIRAVGNDGHFFGIQHTQDRYSTAFYQPFLSDWKNYEGWEAAGAIWTPERAHHLFKEIIGSFE
SPPMDEGVREELADFVARRKAEGGAPTDF
>gi|56697589|ref|YP_167958.1| HAD-superfamily hydrolase, subfamily IA, variant 1 family protein [Ruegeria pomeroyi DSS-3]
MPIDALLFDKDGTLFDFAATWGAFGRAFLIRIGEGDAARAAELGARIGFDFDAARYARDSVVIAGTPGEI
AEVLLPELPGYSHAALVDMINEESARAPQVEAVPLAPFLDAMRARGLRLGVATNDGEAPARAHLGSVGVA
DRFDFIAGFDSGHGAKPGPGQLLAFADLIGLDPARVAMVGDSTHDMMAGRAAGMTTVAVLTGLAGPQDLA
PHADVVLPHIGHIGDWLGH
>gi|56697590|ref|YP_167959.1| hypothetical protein SPO2752 [Ruegeria pomeroyi DSS-3]
MRISADAAETLALQALAWLVTNEELLPVFLGSTGADIGDLRARAGDRQFLASVLDFLTMDDAWVIAFCDE
QGIAYDQPMQARAVLGGDEMHWT
>gi|56697591|ref|YP_167960.1| diguanylate cyclase, putative/response regulator [Ruegeria pomeroyi DSS-3]
MQGTILILDGVSTNRIMLKVQLSAAWYHVVQTDRLEGIGALLRRVRPDLILCAMTLPDGTAMDVKRALLA
DESLAGIPMIAIAGQNDHTARLSALESGIEDVLSQPYDDVVLLARVRSLIRAHAGLEELRQQSGARDMGF
AEDTAAFRGPARIADIALVTQTPGTGAIWRSRLKGHVAHRIDLHRMEDIQHLLRDREPDVIVLELSDGTT
GLRLLADLRARGSTRNAAILAIPNPANAHLAADALDRGADDVMPGGFALRELVLRLETLLLRKARADRYR
STLNARLQAALTDPMTGLSNRRHALPELDRILHEATETGQPFAVMLADLDHFKGINDRFGHPAGDAVLIE
TARRLRSQMRPGDLLARIGGEEFLIVLPGLSQTQALGAASRLCSRINGEPFVVPGQLRPVPVTTSIGLVT
VAPAAGAAQLSAGELIAHADRALYRAKDTGRNRVSLADAAAA
>gi|56697592|ref|YP_167961.1| hypothetical protein SPO2754 [Ruegeria pomeroyi DSS-3]
MSEEKKTLGWPLRLLLLGSLALNLLVIGLAAGAMWRYGGDHGHRPPLPMAATLYRALPEADRDQLRQHIH
GRLDGRKARRAQEMAELAAALRASPFDPAQFAALLATHETRRAESHGAMRAALIDRIASMDQGTRAAYAD
RIERMRMHGFPRRERN
>gi|56697593|ref|YP_167962.1| hypothetical protein SPO2755 [Ruegeria pomeroyi DSS-3]
MKMSDDMSDLDRMLHAARAGRDDLPEALAQRMLADAAGVQASLARPAARPAAVAQDAWRGLLAALGGWRG
MGGLATACAAGVWIGVAPPEFLPDPAQLVLGLESETETLGFYDLADFISEEG
>gi|56697594|ref|YP_167963.1| RNA polymerase sigma factor [Ruegeria pomeroyi DSS-3]
MDGRASTDGPAQAAGPADEALLALFAQGDPRAARLLTERLGPRAFSVALRVLGNRAEAEDVAQEAMLRLW
RTAPDWQAGRARVSTWLYRVVLNLCLDRKRRAKAVDLDAVPEPPDTAPPALEVLQQAARVDALQAALMHL
PDRQRQAVVLRHIEELSNPEIAEIMGIGVEAVESLTARGKRALAGHLAGQRAALGYEDER
>gi|56697595|ref|YP_167964.1| EF hand domain-containing protein [Ruegeria pomeroyi DSS-3]
MKHAGFIAALLLGGVALGASSALAMGPGGGMRHDFSEIDANGDGKITLEEMQGHRAAMFSGADTDGDGKL
SQAEMEAQAMARAKERVAWMLERHDANKDGALSQDEIPKPGAGRKAGRMFDKMDSDGDGAISEQEFSEMQ
ARGHGRHGMKAWCDGNRKN
>gi|56697596|ref|YP_167965.1| hypothetical protein SPO2758 [Ruegeria pomeroyi DSS-3]
MTDQTLCADTDRPTWPAVLTGFRGRCPNCGQGRLLHSYLKVNDQCSECGEEYLHHRADDGPAYLTILLVG
HLMAPLLLVVFETWRPAPMTLFSIFALGCVSLSLYLLPRLKGMVVAYQWARRMHGFDKSR
>gi|56697597|ref|YP_167966.1| NUDIX family hydrolase [Ruegeria pomeroyi DSS-3]
MTEQQDKTAIRNAATVIVLRDRLDNPAILMGQRGAKAAFMPNKFVFPGGAVDAEDARVPLASPLPPVCAD
RLTEKAPQSLGHALAVAAVRELWEETGLILGRPGDWPGMVPADWQSFAATGNLPAAEALQFVFRALTPPG
RPRRFDARFFLVDAGAISGDLDDFTHASDELSHLQWIPLKEARRFDLPFITEVVLAEVAGRVTDPEPPAS
VPYFHNNEEASLFLRLRGYPMPETG
>gi|56697598|ref|YP_167967.1| metallo-beta-lactamase family protein [Ruegeria pomeroyi DSS-3]
MSRERLIYLPLGGAGEIGMNAYVYGYGKPGKERLILVDMGVAFSDMDTTPGVDLIWADISWLRENVDRLE
AVFITHAHEDHVGAVAHTYDQLRKPIHARAFTANIARRKMSELGLPEQAVQTVSAWPEQVQAGPFTVGFL
PVSHSVPESAALVIDTPAGRIVHSGDFKLDPSPVVGEAFDPELWGSVGKSGVRALVCDSTNVFSPNPGRS
ESEVGPEIEKLVAGASGMVVATTFASNVARVRTLAEAGARAGRSVVLLGRAMRRMIEASMETGVLTEFPP
VISPEEAQDIPRDHLMLIVTGSQGERRAASAQLARGKYRGLELAEGDLFLFSSKTIPGNEKEVIRIINQL
SEKGVDVVDDSSGRYHVSGHANRPDLARVHALIDPQMVIPMHGEHRHLREHARLAEAGGRQGVVAVNGTM
LDLSGNAPKVAAHVETGRTYLDGTVQVGALDGVIRNRIRMALNGHVTVTVILDEEDEPLGEPWCDIMGLP
EIGSSKAPLVDVMEEDLNQFLMRSNQKTLRDDDRLEEALRRIARQTAQAEIGKKPEVTVVISRMR
>gi|56697599|ref|YP_167968.1| pantothenate kinase [Ruegeria pomeroyi DSS-3]
MLLAIDCGNTNTVFSIWDGEKFLCTLRTSTHHARTADAYFTWYSTLIKHYGIETDITDVIISSTVPRVVF
NLRVFADRFFGCRPLVVGKPDCLLPVQPRVDAGTAVGPDRLVNAAAAYDRHGGNKIVVDFGTATTFDVVD
DDGAYVGGVIAPGVNLSLEALHMAAAALPHVDIAKPQAVIGTNTVACMQSGVFWGYVGLVKEICARIKGE
RDRDMQVIATGGLAALFQQSEILFDIFEDDLTMHGLTVIHRHNKENGTV
>gi|56697600|ref|YP_167969.1| biotin--acetyl-CoA-carboxylase ligase [Ruegeria pomeroyi DSS-3]
MSDWPQGYGKRVLDEVDSTLNEAARIAPTLSGPEWIMARRQTAARGRRGRAWTQAQGNLAATLVMRPVGE
AKQAALRSFVAALALFDACVAVTGRAEGLALKWPNDVLLNGGKLAGILLESTGHGSGVAHLAIGIGVNLA
DAPGADAVEPGAVRPVSLVSETGAQVEPELFLTELAAAFARYETQFLTYGFAPIRSAWLARAARLGEVIT
ARTATSQTVGTFETVDAEGNLVLNTAQGRVSIPAAEVYF
>gi|56697601|ref|YP_167970.1| NADH dehydrogenase subunit N [Ruegeria pomeroyi DSS-3]
MIQADLYIILPEIVLALYAMAALLGAVYTTKDGMGPALVWATAALMAVLAIWIATQDSGTRVAFNGMFVD
DAFARFAKVAILLSAGAVLLMSQDYMARRGLLRFEYPLLVALAAVGMMMMVSAGDLMSLYMGLELQSLAL
YVVASLRRDSVKSTEAGLKYFVLGALSSGLLLYGASLVYGYTGTTLFSGILASAHHGEVSIGLLFGLIFL
ISGLAFKVSAVPFHMWTPDVYEGSPTPITAFFATAPKVAAMGLFARLMFDAFGNAVSDWQQVLVVLSVLS
MFLGAVAAIGQRNIKRLMAFSSIAHMGYALIGLAAGTQAGVQAMLIYMAIYVTMNIGTFAFILMMERDGQ
PVVDIDALRQFSRRDPGKALAVLILMFSLAGVPPMLGFFAKLGVWQAGIDAGLMGLVVASAIASVIGAFY
YLRIVFYMYFGAENEEPIDTRSSPVLWVALMGSAAMMLVGLFYQFGVEGAAAAAAATLVN
>gi|56697602|ref|YP_167971.1| NADH dehydrogenase subunit M [Ruegeria pomeroyi DSS-3]
MDNILSIVTFIPALAAAILAVFLRGEDAAAQRNAKWVALFATTVTFLVSIGIYTGFDPADTGFQMVEEGE
WLMGLKYKMGVDGISVLFVLLTTFIMPLTILASWEVTTRVKEYMIAFLLLETLMLGVFMALDLVLFYLFF
EAGLIPMFLIIGIWGGKERIYASFKFFLYTFLGSVLMLVAMVSMYVDAGTTDIALLMKHQFSSESFSLLG
VHVLGGAQTLMFLAFFASFAVKMPMWPVHTWLPDAHVQAPTAGSVVLAAILLKMGGYGFLRFSLPMFPVG
AEVMTDLILWLSAIAVVYTSLVAMVQEDMKKLIAYSSVAHMGFVTMGIFAANQQGVDGAIFQMLSHGFIS
AALFLCVGVIYDRMHTRDIDAYGGLVNRMPTYARVFMLFTMANVGLPGTSGFIGEFLTLMGTFQKNTWVA
AVAASGVIFSAGYALWLYRRVVFGDLIKESLKAITDMTSRERAIFAPLIVMTILLGVYPALVTDIIGPST
AALISNFDTALAAAETATQVASH
>gi|56697603|ref|YP_167972.1| NADH dehydrogenase subunit L [Ruegeria pomeroyi DSS-3]
METTILFAPLVGAILCGFGWKFIGEKAAMWTATGLLFLACALSWIVFLGFDGHTQQIEILRWIESGSLST
SWSIRLDRLTAIMLIVVTTVSALVHLYSFGYMDHDPQWRTGESYKPRFFAYLSFFTFAMLMLVTADNLVQ
MFFGWEGVGVASYLLIGFYYRKPSANAAAMKAFIVNRVGDFGFALGIFALFFLVDSINFSDIFAAVPTLA
ETQLTFLWREWNAAEVIGVLLFIGAMGKSAQLILHTWLPDAMEGPTPVSALIHAATMVTAGVFLVCRMSP
LYEFAPGAAGFITVLGATTAFFAATVGLVQTDIKRVIAYSTCSQLGYMFVAAGVGMYSAAMFHLFTHAFF
KALLFLGAGSVIHAMHHEQDMTNYGALRKKIPYTFWAMMIGTLAITGVGIPLTTIGFAGFLSKDAIIESA
YAGGSAYGFWLLVIAAFMTSFYSWRLMFLTFYGEARGDKHTHDHAHESPKVMLVPLGVLSLGAVFAGMIW
YGNFFGHADQVGKFYGIPVAEAAAGGQDAAHGASDSDTVTTSEAAHGSDDAGHGGEAAHAVAEGAHHAAF
AGAPGDGALYFGPDNHVLDDAHAAPKWVKVSPFIAMVLGLALAYLFYIVNPELPKRLAANQRPLYLFLKN
KWYFDEIYDAIFVRPALALGRLLWKRGDGGTIDGFLNGVAMGVVPYFTRLAGKAQSGYIFTYAFWMVLGI
AALVTWMSIGGGAH
>gi|56697604|ref|YP_167973.1| NADH dehydrogenase subunit K [Ruegeria pomeroyi DSS-3]
MIGLEHYLTVAATLFVIGIFGLFLNRKNVIVLLMSIELMLLAVNINLVAFSSFLGDLVGQVFTLFVLTVA
AAEAAIGLAILVCFFRNRGTIDVEDVNVMKG
>gi|56697605|ref|YP_167974.1| NADH dehydrogenase subunit J [Ruegeria pomeroyi DSS-3]
MSVFAFYLFAISAITGGLFTVISRQPVHSVLWLILAFISSAGLFVLLGAEFVAMLLVIVYVGAVAVLFLF
VVMMLDVDFAELKAEMARYMPLALLIGLVILMQFVMAYGAWETAEGAAGHLAQPMPADRHNTEALGLIIY
DQYFLLFQLAGLILLVAMIGAIVLTLRHRQDVKRQDIVAQMMRDPAKAMELKDVKPGQGL
>gi|56697606|ref|YP_167975.1| 4-carboxymuconolactone decarboxylase, putative [Ruegeria pomeroyi DSS-3]
MTDMSKLFEQLIEQSQAMAKAVNPGFENFSPSEAFKGFEAMWPTMPKEVMELMFGNTVNKDGLDAKTRLL
LTLAGLTCQGAQADTAVRQTVRHALEAGARKQEIVETIGQMSVFAGIPAMTRALNLAQEVMGDNGDDDQ
>gi|56697607|ref|YP_167976.1| hypothetical protein SPO2769 [Ruegeria pomeroyi DSS-3]
MKPVLPDTLSIAPGKTTPPLGTLWLGPRLPRMETMCMLNMVRAGWDVTLFGYQRPENLPSDIPFRDAREV
MERDLSDRAVEGARALPGAMAADIFRLHMIRQENMAWVDSDFLPVSNRFPDIRRSFFAVNDNLPANTTMY
FAPDDPVLLDYIAAVEDEFPEPQPFYGAQVNARIRELRRTDTPMHRGQMHARRYSGPFVLRHLLQIHNRT
GEALAEDVIFPIQYSNKSQFWDPYEVAARSFSERTWAVHLWGSRIRGQMEEREADPGSFLGYFLAEVGMG
KPQAKRGVA
>gi|56697608|ref|YP_167977.1| NADH dehydrogenase subunit I [Ruegeria pomeroyi DSS-3]
MTQIDYTRAAKYFLLQDFWVGMKLGLKYFFSPKATINYPHEKGPLSPRFRGEHALRRYPNGEERCIACKL
CEAICPAQAITIDAEPREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFATETREELFYDKE
KLLSNGDRWEAEIARNLELDAPYR
>gi|56697609|ref|YP_167978.1| hypothetical protein SPO2771 [Ruegeria pomeroyi DSS-3]
MSDGVDIDLKIEMLSTLQSQLERACSEGHESLPLGSIRKDVQINVSDPCAALETVTKQIDALQQGEREMK
K
>gi|56697610|ref|YP_167979.1| NADH dehydrogenase subunit H [Ruegeria pomeroyi DSS-3]
MAEFFDTPGGIALIILAQVLAVVAFVMISLLFLVYGDRKIWAAVQMRRGPNVVGVYGLLQSVADALKYVV
KEVVIPAGADRTVFILAPMTSFVLAMIAWAVIPFNDGWVLSDINVAILYVFAVSSLEVYGVIMGGWASNS
KYPFLGSLRSAAQMISYEVSIGLIIIGVILSTGSMNFGDIVRAQDTGWGFFGWYWLPHFPMVFLFFISAL
AETNRPPFDLPEAESELVAGYQVEYSATPFLLFMAGEYIAIFLMCALTSLLFFGGWLSPIPGLPDGVLWM
VAKMAFFFFIFAMVKAITPRYRYDQLMRLGWKVFLPFSLVWVVFVAFAAKFDWFWGAFARWSVGG
>gi|56697611|ref|YP_167980.1| putative lipoprotein [Ruegeria pomeroyi DSS-3]
MTRLALISPLALMACADPAQDQVSRFAPQYMGVETALLEGDLVQFGVRMSGARSVADLDDYAECAAAQYA
LIRGYGFARHLRTNVNEKGGVWAADAVYTISPSLPRGAKTIDAEVVVAHCAENGIPTV
>gi|56697612|ref|YP_167981.1| NADH dehydrogenase subunit G [Ruegeria pomeroyi DSS-3]
MSDLRKINIDGHEIEVEGAMTLIQACEVAGIEVPRFCYHERLSIAGNCRMCLVEVVGGPPKPAASCAMQV
RDLRPGPEGQPPVVKTNSPMVKKAREGVMEFLLINHPLDCPICDQGGECDLQDQAMAYGVDFSRFREAKR
AVDDLDLGPLVGTAMTRCISCTRCVRFTTEVAGITQMGQTGRGEDAEITSYLNQTLDSNLQGNIIDLCPV
GALTSKPYAFTARPWELTKTESIDVMDALGSNIRVDTKGREVMRILPRNHDGVNEEWISDKTRFVWDGLR
RQRLDRPYVRIDGKLKPATWPEALSAAATAMKGKKLAGLIGDLVPVEAAFALKQLVEGQGGKVECRVDNA
RLPIGNRGAYVGTAAIEDIDDADMILLIGTNPRDEAPVLNARIRKAWSRGAEVALIGPAADLTYDYYHAG
TDRQALADMIAEGVSDETRDNKKSLVIVGQGALREADGLAVLAAAQKMAEISGSGLLVLHSAAGRVGAMD
IGAVTEGGIEAAIDGAEVIYNLGADEVEIDAGAFVIYQGSHGDRGAHRADVILPGAAYTEENGLFVNTEG
RPQLAMRAGFAPGEAKENWAILRALSAELGATLPFDSLAQLRQALVAEVPHLAQIDQVPENAVEALEQGP
LGTASFRIAVDDFYLSNPIARASALMAELSAAAKARRAEKIAAE
>gi|56697613|ref|YP_167982.1| hypothetical protein SPO2775 [Ruegeria pomeroyi DSS-3]
MNGRLAYPCRSGALLLNNRPGVHRSGSSRPKGHAMLKSILTAAASLAIAASAAAAKPPLREVPEIADGIF
TIVVANEIRKNCDEIDGRLFKGIGEIRRLRARANELGYSDSEIRAVLDSDVEKERFRDRGRQYMAKLGLN
YDKPGDLCRLGRLEISNNSAIGALLRAN
>gi|56697614|ref|YP_167983.1| hypothetical protein SPO2776 [Ruegeria pomeroyi DSS-3]
MNVMSNPTASRFPQRAALALLIGAVAATAACNSTKRENRLLFGGHFFPVKAKPVDKKATLSVFTVTVDKV
SQSFDDAREAGRHGGISYCIANYGSSKIDWQVGPDSEPAQLRIEGDKMTFQGTCQRP
>gi|56697615|ref|YP_167984.1| NADH dehydrogenase I subunit F [Ruegeria pomeroyi DSS-3]
MLKDQDRIFTNLYGMHDRTLKGAMARGHWDGTAGIIGKGRDWIIQQMKDSGLRGRGGAGFPTGLKWSFMP
KESDGRPSYLVVNADESEPGTCKDREIMRHDPHTLIEGCLIASFAMNANACYIYIRGEYIREREALQAAI
DEAYDAGLLGKNAAKSGWDFDLYLHHGAGAYICGEETALIESLEGKKGMPRMKPPFPAGAGLYGCPTTVN
NVESIAVVPTILRRGPEWFAGFGRQNNAGTKLFAISGHVNNPCVVEEAMSISFEELIETHCGGIRGGWDN
LLAVIPGGSSVPCVRGEKMKDAIMDFDYLRGELGSGLGTAAVIVMDKSTDIVKAIWRLSKFYKHESCGQC
TPCREGTGWMMRVMDRLVRGEAEPEEIDMLWDVTKQVEGHTICALGDAAAWPIQGLIRNFRDEIEDRIKA
QKSGRMGAMAAE
>gi|56697616|ref|YP_167985.1| hypothetical protein SPO2778 [Ruegeria pomeroyi DSS-3]
MARTGNMDEKLEQVIARKGRHIALVIAVTMVLWLVLSMFIGPALGLPGRYALLIDFAALAGFIYAVINIF
QLWRLRQDSQR
>gi|56697617|ref|YP_167986.1| hypothetical protein SPO2779 [Ruegeria pomeroyi DSS-3]
MTTTKDRTADTARVWKRAAYGGLVVAGVILVFGQTSVTTAVIAGVVAFAAGGYLGGRMSGAVQEAQERAE
LATQTPAEAAPSAPAPMEQAPVEQAPVASAAAEPEPVAAQAEAAEEMNLVQPSKALPGEAELAARKGTWR
YEGNSATT
>gi|56697618|ref|YP_167987.1| NADH dehydrogenase subunit E [Ruegeria pomeroyi DSS-3]
MLRRLHPEQPDSFAFTPANLAWAEAQVTKFPEGRQASAVIPLLWRAQEQEGWLTRPAIEAVADMLGMAYI
RVLEVASFYFMFQLQPVGTVAHIQICGTTSCMICGAEDLIAVCKEKIADKPHTLSADGKFSWEEVECLGS
CTNAPMAQIGKDYYEDLTAKRFGELLDELAAGKVPVPGPQNGRYASEPLKGLTSLTEYDSGKTRYNASVQ
LATDIGDTVKRIDGTEVPLLTPWIGKDGTVASRAGKVSPPPAPAAPKPAVKQTPKAEAKPAPKPEAEPVL
KPSAALPGQEELAARKGSWRYEAPAAEVAQADATGDAGEEQPLTLSAAREGGADDLKLLKGVGPKLEGLL
NELGFYHFDQVAAWTPAQVAWVDARLTFKGRIERDGWIEQARQLAAGEETEFAKRAKKDGIYDE
>gi|56697619|ref|YP_167988.1| putative lipoprotein [Ruegeria pomeroyi DSS-3]
MSPMRSILTGMGMLAGLAACEVAPTGEGNTGVITGEMRADYLDAVASVGCVLRDERQYGAVDFQAGLSRE
QTLAITANYLSRGKAERVADGNTIRINTGPCAA
>gi|56697620|ref|YP_167989.1| NADH dehydrogenase subunit D [Ruegeria pomeroyi DSS-3]
MMDGGKGFEDALTGEQKIRNFNINFGPQHPAAHGVLRMVLELDGEIVERCDPHIGLLHRGTEKLMESRTY
LQNLPYFDRLDYVAPMNQEHAWCLAIEKLTGVEVPRRASLIRVLYSEIGRILNHLLNVTTQAMDVGALTP
PLWGFEEREKLMVFYERACGARLHAAYFRPGGVHQDLPDALLDDIEAWSHTFPNVLDDIDGLLTENRIFK
QRNCDIGVVSEEEILQYGFSGVMVRGSGLAWDLRRAQPYECYDEFEFQVPVGKNGDCYDRYLCRMEEMRQ
SISIIRQAIAKLRDCPGDVLARGKLTPPKRGDMKTSMESLIHHFKLYTEGFHVPAGEVYAAVEAPKGEFG
VYLVADGTNKPYRSKIRAPGYLHLQAMDHVARGHQLADVAAIIGTMDIVFGEIDR
>gi|56697621|ref|YP_167990.1| hypothetical protein SPO2783 [Ruegeria pomeroyi DSS-3]
MLTILGELAALAALGLALAGAAAKAAQAERARVRAAAKRNARARR
>gi|56697622|ref|YP_167991.1| NADH dehydrogenase subunit C [Ruegeria pomeroyi DSS-3]
MSDALRELGTHLELKRADCILSWDVTFGELNVDVAPSNLVDFVDFLRSDSSCRFSTLVDITAVDYPERAK
RFDVVYHFLSMYQNQRIRLRVSIREDDMVPSITDVHPSANWFEREVFDMFGILFTGHPDLRRILTDYGFR
GYPLRKDFPTTGYTEVRYDEAEKRVVYEPVSLVQEYRQFDFMSPWEGADYILPGDEKKEG
>gi|56697623|ref|YP_167992.1| NADH dehydrogenase subunit B [Ruegeria pomeroyi DSS-3]
MEERGAGMAVMTGANTAGVDKEVATQALNAELQDKGFLLTSTEDIINWARTGSLHWMTFGLACCAVEMMH
TSMPRYDAERFGIAPRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRYVISMGSCANGGGYYHYSYS
VVRGCDRIVPVDIYVPGCPPTAEALLYGLLQLQRKIRRTGTIVR
>gi|56697624|ref|YP_167993.1| NADH dehydrogenase subunit A [Ruegeria pomeroyi DSS-3]
MEELLREYLPILVFLAVAAGLGLVLILAAVVLAVRNPDPEKVSAYECGFNAFDDARMKFDVRFYLVSILF
IIFDLEIAFLFPWAVGFKDMSDVGFWSMMVFLGVLTIGFAYEWKKGALEWQ
>gi|56697625|ref|YP_167994.1| enoyl-CoA hydratase [Ruegeria pomeroyi DSS-3]
MYETITIDTDARGVATLTLDRAEKHNAMSAQMLADLSAAAAGLAADDAVRVVVLTGAGKSFCAGGDLGWM
QAQMAADAETRFVEARKLAEMLQALNSLPKPLIGAVQGNAFGGGVGMASVCDIAIGVDTLKMGLTETRLG
IIPATIGPYVIARMGEARARRVFMSGRLFGAAEAVELGLLARAVPADGLAAAIEAEVTPYLACAPGAVAS
AKALIRDLGPRVDDAVIDRTIRALVDRWETDEAREGIGAFFDKRKPAWNTQV
>gi|56697626|ref|YP_167995.1| hydroxymethylglutaryl-CoA lyase [Ruegeria pomeroyi DSS-3]
MGDWVEIFEMGPRDGLQNEKREIPVAEKVALVDCLSRAGFRRIEVASFVSPKWVPQMAGSAEVLSGITRA
EGVRYAALTPNMRGYEDALAARADEIAVFASASEGFSKANINASIEESIARFEPILEAARHIDLPVRGYV
SCVTDCPYDGAVAPEKVAEVADRLFALGCYEISLGDTIGQATPDKIARMLLAVRERVPVSRLAGHYHDTA
GRALANIDASLALGVRVFDAAVGGLGGCPYAPGAAGNVATEAVAAHLERLGYQTGLDMDVIAEAADMARA
MRTG
>gi|56697627|ref|YP_167996.1| methylcrotonyl-CoA carboxylase, alpha subunit [Ruegeria pomeroyi DSS-3]
MFDKILIANRGEIACRVMETAQRMGVACVAVYSDADAGAKHVAMADEAVHIGGPAPADSYLKGDVIIAAA
LETGAQAIHPGYGFLSENPGFVDAVEAAGLTFIGPSASAIRAMGLKDAAKALMHEAGVPVVPGYHGDNQD
PEHLAGAADTIGYPVLIKAVAGGGGKGMRLVERPQDFAAALDSARGEASTAFGNDAVLVEKFVSKPRHIE
VQVFGDGTHAVHLFERDCSLQRRHQKVIEEAPAPGMTEEMRAAMGQAGVRAAEAIGYKGAGTVEFIVDAS
DGLRADRFWFMEMNTRLQVEHPVTEAITGVDLVEWQLRVAAGESLPARQEELSITGHAFEARLYAEDVPK
GFLPATGTLSHLAFPEGCRADSGVRAGDTISPWYDPMISKVIVHGPTRAVALSRLDRALAGTQVGGTVTN
LAFLGALTRHAGFAAGDVDTGLIGRDIDALVAAPAPEPRHVAAAAMAVLGLAGDQAEQGFTLWAPLHRAI
TLGWQGEELAVDVQVEGRNRQLWQVGADQVVAERHDGRWRIGGRAMPDVSVAGGVATVFDGYGLPFDIID
PLERDSSAGGDTNVVLAPMPGLVKAVFAAAGQAVQEGDRLAILEAMKMEHSLLAARDGVVAEVLAEAGAQ
VEAGAALVRLVEEEA
>gi|56698721|ref|YP_167997.1| thermonuclease family protein [Ruegeria pomeroyi DSS-3]
MIVGFSVARKGRVLPYSRGYRKTPKLDMGLLPKKRRRSPLDPRVYLRAVMVAAAAGLVLLQLLPDSAIAV
RQIVQSDECRIVSVTDGDTVRIWCPSRGVQKVRLLGFDTPEVFSSSCLSELARGTAATWYLRYVLLTSSE
TTIVLQGSDRYQRRLAQVFVDGKRLSTLMINAGHARPYSGGKRSEWCG
>gi|56697628|ref|YP_167998.1| methylcrotonyl-CoA carboxylase, beta subunit [Ruegeria pomeroyi DSS-3]
MKLTSKAMPASEGFKANRAAHLDALAQIGAAAEAARLGGGEKSRARHESRGKMLPRRRVANLLDAGSPFL
EIGATAAFDMYDNAAPAAGVVAGIGRVEGQEVMVVCNDATVKGGTYYPMTVKKHLRAQEIAEENNLPCIY
LVDSGGANLPNQDEVFPDRDHFGRIFYNQARMSAKGIPQIAVVMGSCTAGGAYVPAMSDVTIIVKEQGTI
FLAGPPLVKAATGEVVSAEDLGGGDVHTRLSGVADYLAEDDAHALALARRAVRSLNRRKPLTVDWASPEE
PAYDPEEILGVVPADLKTPYDIREVIARLVDGSRFDEFKPRFGETIVCGFAHLKGCPIGIIANNGVIFSE
AAQKAAHFVELCSQRKIPLVFLQNITGFMVGRKYENEGIARHGAKMVTAVATTAVPKITMLVGGSFGAGN
YGMAGRAYQPRFLWTWPNSRISVMGGEQAAGVLATVKRDGIERQGGSWSAEEEAEFKRPTLEMFERQSHP
LYASARLWDDGIIDPRKSRDVLALSLSAALNAPIEDTRFGVFRM
>gi|56697629|ref|YP_167999.1| acetyl-coenzyme A synthetase [Ruegeria pomeroyi DSS-3]
MTFAARIPGLRPDGGWDLPERLNMARQCLSQPAGALAIIDLTGPARRDITHGDLSGMVQGLARALLPRVA
PGDRVGVLLSQSPWCAAAHLALWHIGAISVPLFKLFQQDALRSRLEDAGARLVLTDAEGATLLGDLATPL
MAAEIGLPGEPVPQADTRPEDPAVLIYTSGTTGRAKGALHGHRVLTGHLPGVSISHNHLRPGDCLWTPAD
WAWIGGLFDVLMPGLALGIPVVAARLDKFSAEACADVIAQGGVRNVFFPPTALRMLKAADQALPGLRSVA
SGGEPLGAEMLAWGEGAFGLTINEFYGQTECNMTVSSCAADFPVRPGCIGKPVPGHEVAVIDDTGQPTRG
EGDVAVRRGSASMLLEYWRNPAATAEKFRGDWLVTGDRGVWEGDYLRFVGREDDVITSAGYRIGPAEIED
CLLTHPGVATVGVVGKPDPLRTEIVKAYVVMKPGARASEEELQTWVKDRLAQYSYPREVAFLDALPMTVT
GKVIRKELKRRAAAELEANP
>gi|56697630|ref|YP_168000.1| outer membrane protein OmpW [Ruegeria pomeroyi DSS-3]
MTRMAAALALSTALATLAGPLAAQSQGDWTVGLGVGYVNPKSNNGTMAGGIATVDDNTRPIFTVEYFIRD
NLGIELLAATPFKHDVSISGIGYAGNVKHLPPTLSLNYHFPTNSAWKPYLGVGVNYTTFFEENSPLGTLK
LDDSFGVAVNAGVDYQISDRGALRLNARWINIESDATLNGAAIGTAEIDPLVIGIQYVHRF
>gi|56697631|ref|YP_168001.1| isovaleryl-CoA dehydrogenase [Ruegeria pomeroyi DSS-3]
MFAATMQFDLGEDVNALRDMVHRWAQERVRPMAAEIDQTNEFPNELWREMGDLGLLGITVPEEFGGAGMS
YLAHVVAVEEIARASASVSLSYGAHSNLCVNQIKLNGNDEQKRKYLPGLVSGEHVGALAMSEAGAGSDVV
SMKLRAEKRNDHYRLNGNKYWITNGPDADTLVVYAKTDPEAGSKGITAFLIEKSMKGFSTSKHFDKMGMR
GSNTAELVFEDVEVPFENVLGQEGRGVAVLMSGLDYERVVLAGIGTGIMAACLDEIMPYMAERKQFGKPI
GSFQLMQGKIADMYTAMNSARAYIYEVAKACDRGDVTRQDAAACCLYASEQAMVQAHQAVQAMGGAGFLS
DSAVSRIFRDAKLMEIGAGTSEIRRMLIGRELMNTVL
>gi|56697632|ref|YP_168002.1| hypothetical protein SPO2794 [Ruegeria pomeroyi DSS-3]
MKRRKAAKAPFRKGRRLCCYGSYAGIVDGWGKRWYRGY
>gi|56697633|ref|YP_168003.1| aminotransferase [Ruegeria pomeroyi DSS-3]
MTEIFSGSFTQQEPIPDEAIEAALAVLRHGRLHRYNLAKGELGETALLEQEFAAQTGARYCLAVASGGYA
LATALRAVGVKPGDAVLTNAFTLAPVPGAIASVGARPVFVGVTESLTIDLDDLAAKAGVARVLMLSHMRG
HLCDMDRLMQICDAAGITVIEDCAHTMGAAWNGVPSGRQGAVGCYSCQTYKHVNSGEGGLLVTDDEEIAA
RAVMMSGSYMLYERHLAAPGPEVFERIKYHTPNISGRMDNLRAAILRPQLRALATQVARWNERYQRIEAG
LRGTPGLSVIERPDVETYVGSSIQFLLLDWVAEKVQEALRRCAARGVELKWFGTPEPVGFTSRYDSWRYA
DSAPMPASDRVLAGIIDMRVPLTFSLEDCDLIARIIRAEVGAVYQS
>gi|56697634|ref|YP_168004.1| phosphoglycolate phosphatase [Ruegeria pomeroyi DSS-3]
MRTVIFDLDGTLADTSGDLLAAANHCFRDMGLGDVLVPGQDAGIALRGGRMMLTRGLERVGAYDAATVER
YYPVLLEAYRGAIDHHSFLYPGAMDAVEELRRAGYGVGICTNKPEALADLLLQRLGVRDAFAALIGADTL
PVRKPDPEPLRAAARAAGGDPAACVLVGDSDTDRNTARAAGVPSILVTFGPSGDDMAALEPEALLERFED
LPHVVTRLIG
>gi|56697635|ref|YP_168005.1| UDP-N-acetylglucosamine pyrophosphorylase [Ruegeria pomeroyi DSS-3]
MSTALVILAAGKGTRMKSDLPKVLHPIAHAPMLVHAMRAGAVLEPARTVIVAGHGAEAVRAAALDEDEGA
TVVLQEEQLGTAHAVDQARAALEGFEGDVVVLYGDTPFLQPDTLERMLAARKTHDLVILGFEAADPARYG
RLVMQGDSLERIVEFKEATEQERAIRFCNSGLLACNAETLFALIAAVGNNNASGEYYLTDVVEIARKQGL
AVTAVACDEAQTLGVNSRADLAAADAIFQTRARAELLDLGVTLMAPETVYLAADTVIGRDTVIEPNVVFG
PGVTVESGATIRAFSHLEGCHVSRGAVVGPYARLRPGAELAENARIGNFVEIKNAEIGEGAKVNHLTYIG
DASIGAGSNIGAGTITCNYDGVMKHRTTIGANVFIGSNTMLVAPVTLGDGAMTATGTVVTRDVEPDALAK
ARVKQENKPDRARKLFEMLRAKKASKQKET
>gi|56697636|ref|YP_168006.1| hypothetical protein SPO2798 [Ruegeria pomeroyi DSS-3]
MLTSYLDQIRAHADAERAVEMAAYHKVARTYLGVANPVLNDLSRDWRRALDLPDRLALADALWQSDIHEA
RVTAAKLLTQARIRPDVAVWDLLQGWLPDFDAWAIADHAAMAMQKRLVADPARLDQVEHWTRSDHMWTRR
AALVATLPWAKMSNPKPADTAARDRILGWAAGYVPDRDWFIQKAVAWWLRDHSKHDPEAVRVFLAEHGPA
MKAFARKEAGKYLKTQLE
>gi|56697637|ref|YP_168007.1| molybdenum cofactor biosynthesis protein A [Ruegeria pomeroyi DSS-3]
MTAPLIDPFARAITYLRVSVTDRCDFRCVYCMSENMTFLPKKDLLTLEELDRMCSTFVRMGVEKLRITGG
EPLVRRDIMTFFNGMTRHLESGALKELTLTTNGSQLERFADQLYAAGVRRVNVSLDTLDDQKFADITRWG
RLPQVLRGIDAAQRAGLRIKINAVALKGFNEEELPRITQWCAERDMDLTWIEVMPMGDIGNENRLGQFWS
LKDVRAEYENHYRVTDLSERTGGPARYVRLEETGQKIGFITPLSHNFCESCNRVRLTCTGELYMCLGQED
MADLRKPLRDHPGSEEPLEQAIRAAIGLKPKGHDFDYSRQQVDGRMSRHMSHTGG
>gi|56697638|ref|YP_168008.1| 3-deoxy-D-manno-octulosonic acid transferase [Ruegeria pomeroyi DSS-3]
MSGPGLTPTPLYHLYRAASAVLVPFVWRTVRKKLSRADVPLERQHERLGHASQPRPAGQLVWFHAASVGE
SLSVLRLITRMGERMPNLEFLITSGTPTSADLIARRMPPRCRHQFAPLDGPGPVARFYRHWRPDAAVFVE
SELWPRMIVEGARAGVPLALLNARLSEKSVRGWQRFPDTARFLLDRFRLFLTQNQQTADNLIAMGADPAR
VTPGTNLKAMAGPLPVDTALLAEMRAAIGARPVWVASSTHPGEEEVVLEAHRQLLADHSDRLLLLIPRHP
ERGAEVSALVTAAGLSVARRSSGESITSGTQVYLADTLGETGTWYAFCPLVFLGGSLREIGGHNPFEPAQ
AGAAVITGPGYFNFAETYLPLIASGGAVEVTTAATLADAVRHWLDDAEAFDTARTQARALVAAQETALEG
VIDTLTTRLELG
>gi|56697639|ref|YP_168009.1| lipopolysaccharide core biosynthesis mannosyltransferase [Ruegeria pomeroyi DSS-3]
MPDLFVTNFNRNFTGVSATAANVIRQQVATHDLALVGHALPGCPAPISARAARALSRTPPPGKPFAIWHV
RRNPEMQTAIWARDVLRLPIRIVFTSAAIRRHSAFPRWLISRMDAVVATSDAAASFVPHVRAVVPHGVDT
DRFTPAPDRPAAWAAQGYGGSFGIATIGRVRPEKGTDLFVEAMLRLLPDMPGAVALVVGRATKEHQKFAL
TLKDKVQRAGMIDRIRFIDEVPPDRLPDLMRALSLVVQLPRYEGYGMVPLEAMASGVPFVGSDTGFFREF
SAQGRAGRVVPLENAGLGAEAARALLADEDVHGAAALAAREIAVESFSAAREAAGIEAVYQQLWSQAAPG
A
>gi|56697640|ref|YP_168010.1| bmp family protein [Ruegeria pomeroyi DSS-3]
MREKIDCSVKKCSASRKKQERIMKNTSITRRVMLAAAVAASALMTAGAAAAEKVKVAAIYTLPVEQQWIS
RIHKALNTAADRGDIVYAFSENVANTDYERVMREYAEQGVQLIVGEVFGLERAARKVAKDYPDTAFLMGS
SFGPVAPNFSVFDNWIHEPSYLTGMVAGAATESNVIGMVGGYAIPEVNRLMHAFMDGARSVNPDVRFIVN
FIDSWYDPPKAKESAFAMMDAGADVMYAERFGVSDAAVERGVKAVGNVIDTSGDYPGTIVASALWHMEAT
IDKAIANVAGGSFEAADYGQYSFMAYGGGSLVLDESLVAPETVAAVRAKEAEILDGLFRVNVNDDRPVSD
N
>gi|56697641|ref|YP_168011.1| sugar ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MTDRTVLRLNGLSKRFGPVVANDDVSLSLARGEVLALLGENGAGKTTLMNMLFGHYLPDAGTVEVADEAG
QLAPLPLGHPQAALAAGVGMVHQHFTLAENLNALDNITLGAEPLRAIRRDRRGARTRIEAIMAHSGLKAP
LNVPVGRLSVGERQRVEILKALYRDARILVLDEPTAVLTPQEADTLFASIKAMTAEGLSVIFISHKLREV
LAFSDRIAVLRHGRKVGEMATSAADEAAIARMMVGADTPRIARSAMAPGAPVLHLQGVSVAGRSQRDSLK
QANLTVHAHEILGVAGISGNGQSALANVISGLAVPAAGHIRVDGSEIPRPSPARMVRAGVGRIPEDRHHE
GIVGAMSVAENMVIERLDDTQVQSRGLLRREAIAAHADELARAYDVRGPGVTAPARLLSGGNIQKLILAR
VFERAPRLILANQPTRGLDMGAAAEVGRRLLEARERGAGIVLISEDLDEILGLADRVVVIRDGQIVETGS
HDRERIGLMMAGEAA
>gi|56697642|ref|YP_168012.1| sugar ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MIRIEPRANRSRAMDLGIPVLSAVIALAFAAIPLLAAGANPITAYGEMVKGVFGSVFAVSEMLTRATPLI
FTGLAAALAFRAKLWNIGAEGQLYLGAMAAVAVGAGWLDLPGLLLVPLIVILGASAGAAGMAVPTYLKSR
FGADEVVTTLLLNFIILIFLQMMLEGPLKDPMGLGWPQSAPILDQGMLPPLMERMRVHSGLILALVLAGV
AQFMLARSVWGFRLRAVGENAAAARHAGINVKRSLFGVAIISGGLAGLAGVSEVAGLKGYLTADLSPGFG
YTGIVVAMLAGLSPVGVVIAALFIASVFVGADSMSRAMGVSSFLADLVVSMSLLCVLVGGFIARYRIIRS
GTGRAAS
>gi|56697643|ref|YP_168013.1| sugar ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MMDLLNILMSESFWAASLRIATPLIFGVLGALICERAGVLNLGIEGIFVVGAMCGWMAVWLGAGLWGGVL
VAALAGAFFGLLHAILTVPLGLSQHVSGLGITLFATSVSYFTYRTALPNVSSPPRIEPFQPLDLPILSDL
PFLGPVLFQQTALTWLAIAMVGLVWYVLNRTALGVAIQAVGDNPDSVDAQGLSVYGLRIGAIVAGSALMA
LGGAFLTMSAFDAFFFGMVNGRGWVCIALVIFASWRPGKALLGALLFGAFDALQVRLQTEMGALVPGQVF
LMAPYILSIIALVIAARSADYPRALLQPWFKGQR
>gi|56697644|ref|YP_168014.1| cytosine deaminase [Ruegeria pomeroyi DSS-3]
MFDLIVKNANLPDGQRGVDIACKDGLIAAVEPGITAEAGTVIEAGGNLVSPPFVDPHFHMDATLSLGTPR
MNVSGTLLEGIALWGELKPIQSVDDIIARALRYCDLAVAKGIGAIRSHVDTCDDELKGVQALLEVRERVK
DRLDLQLVAFPQDGVLRDPTAMANTVRALDMGVDVVGGIPHFERTMADGAESVRLLCEIAAERGLMVDMH
CDESDDPLSRHIETLAYETQRLGLQGRVAGSHLTSMHSMDNYYVSKLIPLMVEAGVHAIPNPLINIMLQG
RHDSYPKRRGQTRVRELRDAGITVGFGSDCVMDPWYSLGRACMLDVAFMGLHVGQLSSRADMDWCFDAVT
ENSARIMGLAGYGLGKGCHANFVLLQARDRIEAIRLRAHRLATIRKGAVICRSAPVTHELAGAGGWSGLD
ETTFAPPQSG
>gi|56697645|ref|YP_168015.1| hypothetical protein SPO2807 [Ruegeria pomeroyi DSS-3]
MNRLDHLTVIAPTLAEGVAHVRDCLDLDVPFGTRHLYMGTHNHRLQLGDRVYLEIVAVDPAGHAPERARW
FGLDDRARVRADWDAGRRLRGWVASTDEMGLVLSAHRRVFGSEVGLPPQNPEFGFSIPQDGSLPLDGAAP
SFIDHRGDPTRMEEIPDLGARLMSFHLTHPDPVGIEQLYQALAIERAPSVTQGPDLRYRAQIAVPGGLKL
LT
>gi|56697646|ref|YP_168016.1| amidohydrolase family protein [Ruegeria pomeroyi DSS-3]
MPVKNRFAELQSEITEWRRDIHENPEILFETHRTSALVAEKLQEFGCDEVVTGIGRTGVVGIIKGKSDSK
GKVIGLRADMDALPIHEQTGLDYASKTPNAMHACGHDGHTAMLLGAAKYLSETRNFDGTVVVIFQPAEEG
GGGGREMCEDGMMDRWNIQEVYGMHNWPGAPVGSFAIRPGAFFAATDQFDITFEGRGGHAAKPHDTIDTT
VMTAQAVLALQTIASRNADPIDQVVVSVTSFETSSKAFNVIPQRVQIKGTVRTMSKEMRDLAEKRIHEIC
AGIAATFGGTADIRYIRGYPVMVNSDEQTEFAAKVARDVSGGCDEAALVMGGEDFAYMLEERPGAYILVG
NGDTAMVHHPEYNFNDEAIPAGCSWWAGIVEQRMPAA
>gi|56697647|ref|YP_168017.1| amidohydrolase family protein [Ruegeria pomeroyi DSS-3]
MPVRNRFAELQDQIAEWRRDIHAHPEIRFEERRTSALVAERLRAFGCDVVETGVGQTGVVGVIQGRATGS
GRVMAFRADMDALPIAEATGLPHASTHPGKMHACGHDGHTAMLLGAAQYLAETRNFDGTVVLLFQPAEEG
GGGAKAMLADGVMDRHGVSEVYGLHNWPGLPAGQFALREGPMMAATDFFEIKVQGRGGHGAMPHLTADAT
LAAAQLTVALQQVVARNVDPLKPAVLSVCSLRTDSDAHNVIADSALIKGTVRYLHPEVQALIRARIAEVA
RATAEAHGATVELKYMQLVPVTSNPATGAAHAAEAARAVTGQAPLEIDPVMGGEDFADMLAERPGAFIFL
GNGDSADLHHPAYEFNDAAIPAGCSWFATLAEQRMPLNP
>gi|56697648|ref|YP_168018.1| amidohydrolase family protein [Ruegeria pomeroyi DSS-3]
MPIKNRLAEMQDEIAGWRRDIHQHPEILYETHRTSAMVADKLRSFGCDEVVTGIGRTGVVGVIRGKTDTA
GRVVGLRADMDALPMQEQTGLAHASTIPGAMHACGHDGHTAMLLGAAKYLAETRNFDGSVVVIFQPAEEG
GNGAEAMVKDGLMDRFGVQEVYAMHNNPGLAAGQFKIRPGPLLAAADTFEIHLEGRGGHAAKPHDTVDTT
VMLSQMIVALQTVVSRNTDPILQAVLSVTSVETSSKAFNVIPQAATIRGTVRTHSGDMRDLIEQRLSEVV
QGVATTFGGKADVNYERGVPVTVNAEEPTRFAAEVATVVSGGCGEARMVMGGEDFSFMLEARPGAFIMIG
NGDSAGLHHPEYDFNDEIIPAGCSWFAEMVERRMPAA
>gi|56697649|ref|YP_168019.1| amidohydrolase family protein [Ruegeria pomeroyi DSS-3]
MPIKNRLADMKEEITGWRRHLHAHPELMFDVHQTAAFVAERLREFGVDDITTGIGRTGVVATIKGKTDTA
GRVIGLRADMDALPIIEATGLDYASTVPGKMHACGHDGHTAMLLGAAKYLAETRNFDGTAVLIFQPAEEG
GAGGREMCEDGMMDRWNIQEVYGMHNAPGLPVGQFAIRPGALLASSDEFEIMVTGKGGHAAAPHDAIDTT
LVASQIVVSLHSIVSRNVDPIKRVVLTVGTFETDSVASNIIAHTARLCGTVRTLDPEYRALAEARVRRVA
EDIASAYGATAQVIWTPGYPATINSEAETQYAAEAALAVSGAVDDAVDPIMPSEDFAYMLEERPGAYIFL
GNGDTAQCHHPAYNFDDEAIPAGSSWYAEMVERRMPAR
>gi|56697650|ref|YP_168020.1| acetylornithine deacetylase [Ruegeria pomeroyi DSS-3]
MTERLSPVEIMGALVAFPTVSRDTNLPLVDWVETYLAGHGITAHRWVDPEQPHKAALFAHVGPWEEGAVV
LSGHTDVVPVDGQPWDSDPFTVVERDGKYFGRGTCDMKGFDALAIWALVEGRYRDLKRPLQLALSFDEEV
GCTGAPPMIVEMQNHLPKGSAVIVGEPSMMQAVTGHKGGFGYDTRVLGFEVHSSIMHTGVNAIMAAAPLI
DWANHRNAENRAATPSALAAMFDPPWTTCHVGMISGGTAHNITAKECRFAMDFRIVPGEAKERWRDAYFA
VAREVEAQMQAVHPEARIDLSEQFHVPPLVPEQEGEAEMLVRALTGDNAGHVVSYGTEAGQFQEAGYSAV
ICGPGDIAQAHQPNEFITVAQFDAGHGFMARLLDRLSE
>gi|56697651|ref|YP_168021.1| peptide/nickel/opine uptake ABC transporter ATP-binding protein putative [Ruegeria pomeroyi DSS-3]
MLDQPIAQIKKLRVEFQTKDGPVVGVEDVSFEINPGETVCIVGESGSGKSVSSLSLMRLVEFGGGDIAGG
QLLFDRRDGGELDLATADQDYMRNIRGNEIGMIFQEPMTALNPVFTVGRQLTEGLRVHKGMNQSQAEERA
LELLRQVRIPEPERRLKQYPHELSGGMRQRVVIAMAMACEPRLLIADEPTTALDVTIQAEILALMDRLKR
ETGTAVMFITHDMAVVAQMADRVVVMFRGNKVEEGTVEEIFENPQHEYTKALLAAVPKLGEMHGKAAPEP
MKLMGVADQRIEPIIGTESPLLTVKGLTTRFPVKGGFFRRTVANVHAVEDVSFTLNKGQTLSLVGESGCG
KSSAGRSILRLVEPMAGEIDLDGVDIMQLDQSGLRKARLDMQMIFQDPFASLNPQMQLLEQVAEPMRNYG
VASGSELVDRVASLFDRVQLPRSFMRRYPHEMSGGQRQRIAIARALALNPKLIVADEAVSALDVSVQAQV
LNLMMELQADLGLSYLFISHDMAVVERVSHHVGVMYLGRIVELGSRVRVFENPQHPYTQALMKAVPIADP
RRRKSEKDLNFKPIPSPIHPIGYEPEPSRYIEVEPGHYVLDGEWAGYTVDRDAIHAGQGGH
>gi|56697652|ref|YP_168022.1| peptide/opine/nickel uptake ABC transporter periplasmic substrate-binding protein [Ruegeria pomeroyi DSS-3]
MSNKECSMKLKTLLMGAIASAALAPAAFAERGSDGNVSIIYWQAPSILNPFLSGGTKDVESASLVIEPLA
RYDENGGMVPFLATEIPTVENGGVSADLTSITWKIAPGIKWSDGSAFTAHDVKFTADYCMHPEGGCAQLT
KFEGVTSVEALDDMTVKVTFDKPTPFPYGPFVGGESPIIQKAQFENCMGAKAPECTTENFGPIGTGPFVV
TEFKPNDVITMKANDNYRDPAKPAFATLTFKGGGDATAAGRAVMETGEFDYAWNLQLAPEVIQQMQAGGK
GTPVAGFGPLVERIMLNQTNPSPALPEGERSTAKHPHPFLQDPAVYKAMSMAIDRPLLVEIGYGQAGKVT
CNWVPAPAAVNSDTFTCDTQDIEGAKKLLDDAGIVDTNGDGVREKDGVPLKVVYQTSTNAVRQDFQALIK
EWWAEIGIESELRNINASVFFGGDPGSPDTFQKFYADVEMYANTFNGTDPQSYLANGLCDKAPKPESQWQ
GENISRFCNEEYDALHAELTKTAGAEARAEIAKRLNDIMVENGGMIPLVHRGRLSAHSNTLGGVVLNVWD
SELWNAADWYRIK
>gi|56697653|ref|YP_168023.1| peptide/nickel/opine uptake ABC transporter permease [Ruegeria pomeroyi DSS-3]
MLTFTIRRLVLAVPTLLFISLVIFLLLELAPGDPMAQVPLTVPPEVKEKMREALGLGQPMHIRFWKWIVQ
FFWIEPQVLIDHYFGTAFSEGKLRVISWQTRSPVMDIVVQRIPQTLWVVGTAYLVAIIIALPIGIYSAYR
QYSWFDQLGTFVSMVGFSVPPFFSGVLVIVIFSVQLGWFPSIYDTTHVVNSWDSFVYQLKQMIMPVMVLA
LQITAQLSRFMRASMLDNLNQDYVRTARAKGLSEYVVVMVHVLRNSMIPVVTVIALGIPSIFGGAIITEQ
VFKVNGIGQLLIGALQANDLPMVQTLTFIFAVLIVLFNLIADVLYGILDPRIRYD
>gi|56697654|ref|YP_168024.1| peptide/nickel/opine uptake ABC transporter permease [Ruegeria pomeroyi DSS-3]
MTPGSAMTELSQPQPTNPPRSQWLDVWDQFRQHRGAMMGATLFFLIVAAVYLGPYLWDLDPTKTAIRERN
QGPSLAHPFGTDQLGRDLLARMMAGGATSVSVGITAMLLSLFLGSFVGVLAGFFRKLDGPLMRLTDLFLA
LPLLPLLLVMMLLFREPLNAAFGLERGIFILIVSAIGITSWMPTARIVRGDVLALKEREFVLAARSIGTT
NTRLITRHILPNVLSPIMVSATLGIATAIITESALSFLGLGFPPDFPTWGRLLFDGVDYLQQFPERVIWP
GLAISLTVLSVNYLGDGLRDALDPRIRGR
>gi|56697655|ref|YP_168025.1| YeeE/YedE family protein [Ruegeria pomeroyi DSS-3]
MFESLGFEETTAKEISVLLGLSLGVLFGLLAERTRFCFRRAVVGEDARQAAGVWFTALAVAILGTQASVA
SGLIGFADHRLLSSDLPVLAVVLGGLMFGAGMVLTRGCISRLTVLGGTGNLRALTVLLVFAVVAHAMLKG
VLAPLRTSLGAVTVDLGETVSLAALPGGAALWTALLALASLLIAARSGNRALPLLGAALIGLLVPLGWVG
TGYVLFDEFDPITMESLSFTAPAADTLFYTIASTSIAPGFGTGLVGGVLLGALAAALLFGSFRWQSFDSP
RQTGRYLAGATLMGMGGVLAGGCTLGAGLAGIPTLSLAALLALTAIALGARLTDAALNAASSGSAGYPAT
PGQQPAE
>gi|56697656|ref|YP_168026.1| hypothetical protein SPO2818 [Ruegeria pomeroyi DSS-3]
MTPIQDHPLRFALANELHARPFPISRAPCTVAYLAVKQPDAAVGRDRKADRAHLIDLLDRHGAPHPQPGA
THYAGQIGRHWLKWESHTEFVTYTAFATGVSDRPFNPADFEVFPPDWLAAAPGQRVTSALLRVEEQLPEA
DIVAALADWFVPESLAVAHVLDRAAVAAGDFRIDPAGHMRFAVFVAPDTGERRIGRIIQRLCEIETYKAM
SMLGFARVKALGPKLGELDSGLTGLMVKMTDGGHPAEDLLPQLLSTSAELETMAARSEFRLGATGAYEAI
VNQRIASLREERFGGRQTFADFMLRRYEPAMRTVKSTERRLKRLSDRAIRAGDLLRTRVDVERSAQNQAL
LESMDRRADLALRLQHTVEGLSVVAVSYYAVSLVSAFLLPLSEWYGVDKKALIALVTLPVVGLVWLGIRR
IRKKLH
>gi|56697657|ref|YP_168027.1| NAD(P)+ transhydrogenase, beta subunit [Ruegeria pomeroyi DSS-3]
MEFGFTTAAYVVAAVLFILSLGGLSGQESAKRAVWYGIAGMALAVFATLIGPGSGLWLLSLILIAAGGII
GTYVAKRVQMTEMPQLVAAMHSLVGLAAVFVGFNAHFELGNVLSMTEEARHGLEGFAALLAHKSPVEQNI
LRVELFLGIFIGAVTFTGSVVAYGKLAGKVTSAATKLPGGHMLNAGAAALSLICLIWYFNSGGFLPLLIM
TLAAFFIGYHLIMGIGGADMPVVVSMLNSYSGWAAAAIGFSLGNDLLIVVGALVGSSGAILSYIMCKAMN
RSFISVILGGFGGTTGPAMEVEGEQIAIDAEGVAAALNDADSVVIIPGYGMAVAQAQQSVSELTRKLRAK
GKNVRFAIHPVAGRLPGHMNVLLAEAKVPYDIVLEMDEINEDFPDTDVAIVIGSNDIVNPAAQEDPNSPI
AGMPVLECWKAKQVFVSKRGQGTGYSGIENPLFYKENTRMFYGDAKQSLDKLLPMID
>gi|56697658|ref|YP_168028.1| NAD(P) transhydrogenase subunit alpha [Ruegeria pomeroyi DSS-3]
MKIGTPKEIFEGENRVAMTPDSAVQLQKLGYDCAIESGAGAAAGFSDALYEAAGVEIIKTAAALWKEVDI
VAKVRQPDATELKRLSKGKTLISFFNPAGNEDGMAAAKSKGANVIAMEMVPRISRAQKMDALSSMANIAG
YRAVIEAGNNFGRFFTGQVTAAGKVPPAKVLIVGAGVAGLAAIGTSTSLGAITYAFDVRPEVAEQVESMG
AEFVYLDFEEEQQDGAATGGYASVSSPEFAAAQLAKFRELAPEMDIVITTALIPNREAPELWTEDMVAAM
KPGSVIVDLAAEKGGNCKLTVKDEKIVTENGVTIIGYTDFPSRMAAQASTLYATNIRHMMTDLTPEKDGQ
INHNMEDDVIRGATVTFEGDITFPPPPPKVQAIAAKSKEKPKELTPEEKRAQEVAAFKAQTKNQVTLLTV
GGLLLLLVGLVAPASFMQHFIVFVLAVFVGFQVIWNVSHSLHTPLMAVTNAISSIIILGALMQIGSGSFL
VILLAGLSVFMAGINIFGGFLVTRRMLAMFQKS
>gi|56697659|ref|YP_168029.1| isoprenylcysteine carboxyl methyltransferase family protein [Ruegeria pomeroyi DSS-3]
MHRVDLPPVWLAAFIAVAWSQQRYFSFGLSLDGGLSDLIAGLLIGGGVLLMLLAVVELRRHHTTIIPHRD
PAAMVQSGIYKRSRNPIYLGDVLFLAGVILHLDAVLSLVLVPVFVWLLEKRFIVPEENRLRRQFRADFAR
YTQKTRRWI
>gi|56697660|ref|YP_168030.1| soxH protein,-like protein [Ruegeria pomeroyi DSS-3]
MTRFLATTLILTAAAAAASEDIADQYPQSELYSKPVEVIPHVFSAIGATAPPTYENAGHNNNLSFIVTDE
GVVVINAGASARLAAALHDEIKQVTDQPVVLVINENGQGHAMLGNSYWRDLGVDVLAHVDAVEETTQNGD
FILMGMERYNRDRAEGTRVEHANVTFEDRYDLTLGGVSIEVMHMGPAHDPGDIQVWIPEWKILIAGDIAF
HERMLPIFEHTCTSCWLETWETRMEPLAPTYVIPGHGHPTNLDQVRRYTYDYLVDLREKIGAHIEEGGDL
AGAYYVDQERWRNLDTFEELATKNAGRVFAEMEWE
>gi|56697661|ref|YP_168031.1| D-beta-hydroxybutyrate dehydrogenase [Ruegeria pomeroyi DSS-3]
MHLNGKHALVTGGGTGIGLAIAQALAAEGAQVTITGRRAEVLEQVATEGLHPMAMDVRHEEEVVTGVARA
VEARGPIQICVANAGIAVGKTLQKTDMAFWRDIMATNLDGAFLTIRESLRSMLETDWGRVITVASIAGLR
GAPGAGAYAASKHGMIGLTRTYSEEFMGTPYTFNALCPGYVDTPIVERNTASISQRTGMAADDALQLMVN
QNRHKRLIAPEEVAAAALWLVRPGSQSINGQCIEIAGGQT
>gi|56697662|ref|YP_168032.1| kynureninase [Ruegeria pomeroyi DSS-3]
MRGLMTDFAATKAMFDLPQGVLYLDGNSLGPLPRAAAARVQQAVTDEWGQLLITGWNKAGWMAQPSELGD
RIGRLIGAEPGHVVTGDTLSIKVYQAVASALELTPGRKVVLSDNGNFPTDLYMVEGLLRSMGPDYELRVV
APEAVEAAITDEIAVLMLTEVDYRTGRKHDMAALTARAHAAGALTVWDLAHSAGALPVDLAGCDADFAVG
CTYKYLNGGPGAPAFIYVAPRHADQVRPALSGWLGHQAPFAFDLDYRPGAGIERMRVGTPPVIQMAALSA
ALDVWDMADMADVRAKSIELTELFIAGVEAACPDLELASPRDPAQRGSQVSFRFAEGYAAMQALIARGVI
GDFRAPDIMRFGFTPLFIDAGDVKAAVAIIADVMQNRLWDNPEYKTRARVT
>gi|56697663|ref|YP_168033.1| TetR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MKDADFDPRQKAILDSAWQAFAAYGFRKTSMDDIARGARMSRPAVYLCYKNKEAIFRAVVQYCYDLTAEA
VQGALGAGGSVPEVLERAFIAHGQTVVALLDSPHGVELLDAGSSTAPDIVDAGEAGLRALYAAWLTREAA
ARRVALHGDVEEVAATIAAALKGVKMTAPDFETYKARTAQLAQILGAGLMRG
>gi|56697664|ref|YP_168034.1| isoquinoline 1-oxidoreductase, alpha subunit [Ruegeria pomeroyi DSS-3]
MATSLTVNGETHRVDLPDDVPLLWVLRDEIGLTGTKFGCGVAACGACTVHIDGEAVRSCQVALGDVWGQV
TTIEGTGTPEALSVLQQAWVDHQVAQCGYCQSGQIMQAAALLAENPAPSDTEIDEAMQGNLCRCGTYPRI
RAAIHGAAAKLKEV
>gi|56697665|ref|YP_168035.1| isoquinoline 1-oxidoreductase, beta subunit, putative [Ruegeria pomeroyi DSS-3]
MARLGKIVRRTFLIGSAAIVGGVAFGAYYVSRPAPNPLKPGPGEAALNPFVLIDQQGVTLFAPRAEMGQG
VMTTWAALIAEELDVIPEQVRVLHGPAAAAYYNSALLGDALPGKGYDTSNFQHSLGEALGVIGRTLSLQV
TGGSTSMKDGFVRMREAGASARETLKQAAANRLGVARDTLRTEAGAVIAADGSRIPYPDLAEDAAKLDPV
EAPLRDPSEWRYLGRTLPRLDMVAKSTGTAEFGVDVRLPGMKFASVRMNPNLGGGMKGFDDSAARAMPGV
EKVVDLGGGVAVIASNTWLAMQAVEAIAVEWETAPYPPETDAIFAQIARAFDDSPNSTMRDDGDVTTLPE
GATVIEAEYSAPYLAHATMEPMNGTALYTGDRLEFWGGNQAPTFMQMKIAEAAGLDTEAVEVHTTYLGGG
YGRRAEFDFGVIATRVAMALPGVPVQTTWSREEDMRHDFYRPGALARMRGAVKDGKAVMIDGRLATQSPS
RQAMTRVTGMPGAGPDKVLVEGFFNQPYAVPNYRISGHIADLAIPVGFWRSVGNSHNGFFHETFVDEMAH
AAGRDPLEFRLELMRAEHAPSAGCLEAVREMSGWTGKTPEGVGRGVAFTYSFGTSVAQVIEVVDEGGTIR
IARAWIACDIGLVLDPETVKAQMFGGMVYGLSAAAHGRITFAGGAVEQGNFPDYDALRMHSAPQVEVRVL
ETNRHMGGAGEPGTPPAMPALGNALFDLTGKRVRSMPFAEHFNLLV
>gi|56697666|ref|YP_168036.1| type I secretion target repeat-containing protein [Ruegeria pomeroyi DSS-3]
MPSGYLVTLGADQDLSLAASIGGSLVSFTTAQSLGAGQWSWTGDYAGTPYYNELEPGQYYLATNGNVYFV
PDLGPVTNLTEGSATAAPFYSPENKVQGTNGADNMDSGFVDRNGNSIDSGDGSDPDGNNDEVYGLGGNDT
IQSGLGADTVYGGSGGDLIDGGDGDDVLFGDGPTPTTEALNWFAEGADGTNLSAGFTQTTGQMDVSVSFT
NTGNNNPLFQVETTDQIYVNGGEDFNNHSSLYLFGNGDGATSTTTIDFAANANYDVQNEVEDVVFRINDV
DWASGNHRDIITVNAFDADGNPVAVTLTPTPTGTGVDTVSGNTITAGSLSDSPDSATGSVLVEVAGPVQS
IEIIYSNALSGTQAIWVSDIYFTPIAAPGGNDTIDGGQGNDTLAGQAGDDLLDGGQGADQVLGGAGNDTV
AAAQGDTIDGGDGDDLFVLSDLGEIGSGTISIVGGEGDETDGDTLDLNGIADRNTLNLTSNVPGELAGTV
ELTDGTLVSFSNIENIICFTPGTLIATAHGPRAIETLRPGDLIVTRDHGLQPLRWVGSRTVAATGNHAPI
RLDPTLLQGASAPLLVSPQHRMLWSGSRAQMYFGESEVLVAATHLLGSPAARRVEGGLVTYMHLMLDRHE
VIYANDAATESFFPGDEGLGALSDRARQEVFDLFPELRSHAGAFGDTARLCLKAHEARILAA
>gi|56697667|ref|YP_168037.1| dipeptidase domain-containing protein [Ruegeria pomeroyi DSS-3]
MSYAIYVGKNHSRTGHAWLAGYGDEPSSHWLEIVPAADHGDGARIEVGVGPEADMPGRRITVPQARHTLR
HMRVSYSYYLGVPAPITNGGVNEAGVAVRDVWSTSRAELREMTPRDQTGFNYSDLARAVLERATSARGAV
DLCAALIAEYGEATYGGNSHLFADEDEAWVMIQFAGGQGLWVAERLGPDSIRASRPGYVLEVPVDDRDHP
DFMWSPNFVSFARDRGWYDGGPFDANAIYGDGKGRWDGIRWIEAEMTKRAARPEKIGLDDMIWAVRTERL
TGDTAGYGQVVPLARAADPALAMMWHAACGALAAPFSPVFLGQDRIPPEYGLHRYLTSGESHRFQDTRKA
VSGGHDTISVVPQANEISVGAFQQSKQLMYLMQLLGEETLNPVHAAFARREDRLSALVLSHIRVAETAIS
AGCRADALAVLSAFSNTELTAALSLVRDLCRGLSVHATHLPEGPVSFPQTW
>gi|56697668|ref|YP_168038.1| hypothetical protein SPO2830 [Ruegeria pomeroyi DSS-3]
MSGLIFTGGPILSMDAGDTRPEAVGVFGDRIVAVGTLAQVRQALPDATLQELGGRTLIPAFIDPHGHFPD
SAIVALLRADLSPRTGCRSLADLFARLAAKAAQTAPGEWVMGAGLDDSQLAERRMPTRDELDAVSPDHPI
WVIHSSGHCGVANSMALARQGITQDSPDPEGGRYLRDASGRLTGGIEGLSAMGEMGDTHFLLDEASFACC
FAAARAEYLAQGVTLAQNSWTAQPLLDLFHKVAVQVDPGIDLILLPVAEIEPEFSQTGIGRDWPEGAITL
GPRKLLTDGSFLMRTAFLTAPYLGTEETGLAYMSRDLLFSEVRKLHRLGFQVHCHCNGDAASDMFLDAVA
AAQADHPRDDHRHTIIHGQVMRRDQIVRCRALGVSVSFFPAHVWFWGDQHHEEILGPRRAQDISPTGWAE
AEGVRFTIHNDASVTPTRPLELIETTVTRRTQGGRVLGPDQRQSPLSALRAHTIDAAWQVFREKERGSLE
VGKLAELAILDDNPLTTSGAIGAIRVSETWRRGIRVYRDTTMKVGEPA
>gi|56697669|ref|YP_168039.1| oligopeptide ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MSALLELNDVVVRFGVRGGLFRDAGSIDAVSGVSLTIDEGKTYGIVGESGSGKTTLARAVAGLHHASAGS
IRYRGQELRDLPEAQFRKLRREIVMMFQDPIGSLSPRLSIKSLITEPFRIQGMKDRDLDAEARRLLAMVG
LPPEFAARYPYQISGGQARRVGVARALALDPKLLIADEPTAGLDVSIQGEMLNLLGRLQDELGLAIMIIT
HNLNVVRHITDRVGIMYLGKLVEEGDTDTVFATPQHPYTLALLAANPEPDPDAQLMRIELQGEPPSILRR
PKGCEFHTRCPFAQASCSSQMPDWQVGDAGAHRCHFPAVWTNHKAVPA
>gi|56697670|ref|YP_168040.1| dipeptide ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MMAVLDIQGLSVSYATPRGELKALRDVSMIVPERKIVGIVGESGCGKSTLISAIIRLMAPNARVAAGDVM
FRGEDLLGRSAAQMRGLRGTEISMVFQDPMQTHNPVLTVGRQMMDIQYRDRLTKAEKRKRATEMLALVGI
PDPEARLNQYPFEFSGGMRQRIAIAMALMAKPSLLIADEPTTALDATLEVQIIKRLRELQDDIGCSILFI
SHHLGVIAELCDEVVVMYAGEVIEAGSVRDVFHTPAHPYTRALLECDPGHIREKTRNLPTIPGSIPDLVN
LPGGCVFAARCPQRHAACAVRPEPQFASPGHRAACHLIKAEVRA
>gi|56697671|ref|YP_168041.1| dipeptide ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MTDTTMPKPRSELGEILYHLVRDPLGLTGLVIVVLILASALFAPWIAPYDPIALNVPDRLQGPSGAHLMG
TDQLGRDTFSRVIWGGRVALQVALPTIGGAIFFGLLLGMIAGYGPKWLDNLIVLLFDTIRSFPTVMFALA
VVALVGPSLNTVIVVIMVTSIPTYGRVVRTLTQSLKEAEFITAEKSLGASTPRIMAVHILPNVLGPLAVL
AAMDIPTVVGLEAGLSFLGMGVKPPTPSWGSLLNDGYNLIRNTPWLIIAGGIPLILTTIGFTFLGEALRD
VVDPKLRGKGGK
>gi|56697672|ref|YP_168042.1| dipeptide ABC trasnporter, permease protein [Ruegeria pomeroyi DSS-3]
MLSFIFKRIGLAAVITVLAVSSLFLIVHMIPGDPVSTMLGPRATPEMRAALETRMGLDKPLIVQIGLFFA
NMLRGDLGMDVFSNRPVTEIVLNQVPFTLTLILFSITWSAVLGIALGCYSAVNRNSLGDRLTGILSVSVI
AVPAFVVALYSLLIFAVKLQWFPAIGAGDAGDWGDQLHHLVLPSLAIGLSWVGYIARLVRASMLEVMGEG
HIRTARAFGLPERRIVFGYALRLAILPTVTVIGVGMGFLLSAAVFTEIVFSRPGLGKLVIDSITTRNYPV
VMGSVLFSTLIFVASTTLADIVNAILDPRIRAGK
>gi|56697673|ref|YP_168043.1| dipeptide ABC transporter, periplasmic dipeptide-binding protein [Ruegeria pomeroyi DSS-3]
MNKPNISWTKVGLPRRSFLKGATALGGLAATGMMMPRMAHAAGGTLKTRTYADIRSMDPAFSQGVVDEEI
HAAIYNKLIQYKPGREWGWQLDAAAMIEQVDDTHINFALKDNIGFTGGFGAMTAEDVKFSFERIIDDTLE
STNKPDWGPLDHVEVTGERTGTIVLKNAFQPLWSITLPYIAGNIVSKAAFDSVGGKIDTQPVATSGPYLH
AGWEPKQKTTLRRNPDWKGEAAAFDEIQIYHIDDEKAAEIAFEAGEIDFTRVSLDSVERLKSNPIAGATL
EEFPSLYYVWVGMNLDNPKLGNLKLRQAIQHAIDVPTIMAAAYFGAAEPSTGIIAPGLSGHRDAPLTGMS
ADLEKAQALMAESGEAGVSLAIDVLNKSANVTAAQIIQANLAAIGVTLEIRLHEGATFWELGSNEELELV
LNRYSMTPDPYYATSWFITEQAGVWNWERFRSEEFDKLHLAAQSEGDPAARAAMYARAQDLMEESGAYKF
LTHEATPVIYRDSVTPALRPDGLPLYRYFGTA
>gi|56697674|ref|YP_168044.1| DNA-binding protein, putative [Ruegeria pomeroyi DSS-3]
MQIDDFASNLRLLCSTESSVSAVCRQIGVNRQQFSKYLSGAARPSPSNMRKIAVHFGVRPAEFMLPADEF
ESHPSVAGKLVGPSVTHSDRDGFESAFRGQTIPLRRYLGYYLSYFLTQSWENSIICAIVRLDEVNGLIRC
RSLERSIDPDDGSLYLSKYDGRVAMLGNRIFVMEYQTLARDALVETVLYPVGRGQLQYLRGTTFGITSRQ
RTPFTSPVVWRYLDDFPTLRDVMRKVGRYDINSAKLDPTARSILLGGHNKGTD
>gi|56697675|ref|YP_168045.1| hypothetical protein SPO2837 [Ruegeria pomeroyi DSS-3]
MARPVVGIIGNSYLLNDQYPTHAGGTMNSDAVANVSGCLPLLIPADPRYVSVAELLEVCDGFLLTGGRPN
VHPEEYGECETAAHGDFDRARDAITLPLVRACVERGQPFLGICRGFQEVNVAMGGTLYPEIRDLPGRMNH
RMPPDGTLEEKFALRHIVSVTEGGVFHRVFGAREVMTNTLHGQGIKTAGARIEIDGLAPDGTPEAIYVRD
APGFTLSVQWHPEWDAASDPVSRPLFAAFGDAVRDWAARGTGPVLQKTG
>gi|56697676|ref|YP_168046.1| hypothetical protein SPO2838 [Ruegeria pomeroyi DSS-3]
MAISLRRARMIIRKALEKGREMQLKPLSVVVLDAGGHVIAFEREDGAAPGRFGIAQGKAYGSVMLGMAGT
AQMARAEAQAYFMAAVNGVYGGKVIPVPGGVLVRDKKGAVIGAVGVTGDTSDNDAIAAMSGIDAAGLAGE
I
>gi|56697677|ref|YP_168047.1| malate synthase G [Ruegeria pomeroyi DSS-3]
MSGRVERNGLEIAGELAAFVETRALPGTGVEPDAFWAGMARMVAELGPKNRALLDRRAALQAQIDAWHVA
HRDKPHDHEAYKTFLAEIGYLLPEGAAFEIETANTDPEIASVPGPQLVVPITNARYALNAANARWGSLYD
ALYGTDAMAGPVPAGGYDRGRGARVVARARVFLDEAFPVQGVSHADARRYHIRDGALLVDGQPLIDPSKF
AGYRGHPKAPDAVLLRNNGLHVELVFDRTHPVGCHDQAGLADVRLESAISAIMDCEDSVACVDAEDKVQA
YSNWLGLMRGDLSEEVTKGGATFTRALAGDLDYLAPDGSAMSVKGRALMLVRNVGHLMTNPAVLDADGAE
IYEGLMDALVTVAIAMHDLKRAGGNSLTGSVYVVKPKMHGPEEVAFAVETFDMVEDILGLPRNTVKIGIM
DEERRTSVNLKECIRAAKSRVCFINTGFLDRTGDEIHTSMEAGPFSRKDFIKRKSWITAYENLNVDIGLD
CGLSGKAQIGKGMWAMPDRMAAMIETKIEHPKAGANCAWVPSPTAATLHALHYHKVDVFAVQGALKSGGR
RAHVDGILEIPLASFRKWSSEQIRREVENNAQGILGYVVRWVDQGVGCSKVPDINDVGLMEDRATCRISA
QHIANWLHHDVVDAQEVMAAMRKMAAVVDEQNAGDPAYHPMAPGFDGIAFQAACDLVFKGRVQPSGYTEP
VLHARRLELKASLGA
>gi|56697678|ref|YP_168048.1| GGDEF domain-containing protein [Ruegeria pomeroyi DSS-3]
MRINTRRKKWAAVAVVTLVSVIASVIVTVIVVGTLDPQSLRPAIIVPLLVAPLATHWGAERLLEIDKLNQ
QLAHLNRIDQMTQLYNRACLLEKLEQEPEEAGMILIADIDHFKQINDTYGHDVGDLVIIEVARVLQRSSL
PEGIAARFGGEEFVIYVPRLDLEAAEFRAEAIRQAVEAQSVMIDGRKLSCTISIGIEIRQMQENVGDVLK
RADEALYRAKAQGRNQVVAARRLARAGKSRETAQARRAP
>gi|56697679|ref|YP_168049.1| aminopeptidase N [Ruegeria pomeroyi DSS-3]
MRDAAPTTIHLKDYTPFGYLVDEVHLTFDLAPDATRVTSRIAFRPNPEAPGHRFFLHGEELRLIRAAIDG
AEVTPEITDAGLTCAAPDTPFVWEAEVEIAPAANTALEGLYLSNGMYCTQCEAEGFRKITYYPDRPDVMS
TFTVRINGTHPVLLSNGNPVDSGEGFAEWHDPWPKPAYLFALVAGDLVAHSDRFTTVSGREVDLNLWVRP
GDEDKCAFGMEALKKSMRWDEEVYGREYDLDVFNIVAVDDFNMGAMENKGLNIFNSAAVLASPETSTDDN
FERIEAIIAHEYFHNWTGNRITCRDWFQLCLKEGLTVFRDAQFTSDLRSAPVKRIRDVIDLRGRQFPEDQ
GPLSHPVRPESFQEINNFYTATVYEKGAEVIGMLKRLVGDAAYAEALDLYFARHDGQACTIEDWLKVFED
VTGRDLAQFKHWYSQAGTPRLTVEEAWQDGTFTLTLSQDTPATPGQPDKLPQVIPVAVGLLNPNGDEVHA
TEVLELTQARQSFSFEGLAARPVASVLRDFSAPVVLDHDLSPEQRAFLLAHDTDPFNRWEAGRSLAGQCL
LDMIIEGTAPDTAYLDGLVAVLRDDGLDPAYRALMLGLPSQSELAASLQQRGLTPDPQAIWDATETLRQA
TAQHMQDLLPRLRAEAQVDAPFRPDADQAGRRALGSATLALLSRLDGGAQAAADFTRADNMSLQLSSLSC
LLKAGKGEVELAAFYDQWRGDRLVIDKWFGLQVAMAAPGQTAETARRLSAHAEFNWRNPNRFRAVFGALA
MHHAGFHHASGAAYQLLADWLIRLDPVNPQTTARMCAAFQTWRRYDEGRQALIGAQLDRILAQPNLSRDT
TEMLTRIRGS
>gi|56697680|ref|YP_168050.1| short chain dehydrogenase/reductase family oxidoreductase [Ruegeria pomeroyi DSS-3]
MRPTLLITGASAGIGAATARLAATRGYDLALNYRQDRAGAEAVAEAARDAGAQVILCPGDVADPEDIRRI
YARVDEGFGRLDGLVNNAGIVDHAARVTDLTHARLRRMFDVNVIGAILVAKEAVLRMQAHGQGGAIVNLS
SAAARLGSANQYVDYAASKAAIDIFTKGLADEVAAEGIRVNALRPGLIETAIHAKGGEPDRAQRLAPGVP
MRRTGTATEAAEAVLFLLSDAASYVTGTTLDVSGGR
>gi|56697681|ref|YP_168051.1| hypothetical protein SPO2843 [Ruegeria pomeroyi DSS-3]
MSLAPRWMSAAEGDPAMTEPLRYVRHARSPRNLALLAAIWAGLVAAVVLFDAAWWLIALFALPTLPLLFE
ILSDRRAGLDLDATRLSWFSGRLDGAVALDEIAQVRLDTRWDFTVRATLYLHSGKQVRLPQECLPPHRRF
EEILTARGLVVVRHHFAGR
>gi|56697682|ref|YP_168052.1| hypothetical protein SPO2844 [Ruegeria pomeroyi DSS-3]
MPSISGAWSVRWLSCRASSTASTTSERAPKASRSATGVPPSVVSRVASAARIASERSCQRSWRARNWPCA
RSRAQSASSRPCSATGMERKSSSRTGLRGCFCADKSTARPKSRAVRSGKELSKVRECFSILVNAWPVWCR
IGLKLTLICGTKKAAAGCFGTGFAASLGDWACTGINPLTTGEMMPNNDQSARGQDFLEPAMRRQAFLGQA
HLFARMQVQCGADGEIPAGVEPDLGDLVQRDGAVEPAGKPAEPGGVQIEPRAAVAQDLEQERQCRQGEKR
DQPPGGIKQHHRRNQPRPDRRQQGQIARAAGVADITERFGHRWVTFRR
>gi|56697683|ref|YP_168053.1| hypothetical protein SPO2845 [Ruegeria pomeroyi DSS-3]
MFGIISPVVSGLMPVQAQSPRLAAKPVPKHPAAAFFVPQISVSLRPIRHQTGQALTSMLKHSRTLLSSLP
DLTARLFGRAVDLSAQKQPRSPVRLEDFLSIPVAEHGRDEADCARLRAHGQFLARQERWQDLSDAIRAAD
ATRETTEGGTPVADLLAFGARSDVVLAVEEALQDSHRTDQAPLIDGIRALEFVRQDHPDDPYIALIVALT
HIDLAWAWRGTGWDTIVPRLNREKCAAHFDRAIEILSPWCGVKMDSPILQAACCALLAGRRTSQRRVADC
YEALIDLDRHNSRHMRALGNHLLPRWFGSYAELELEARRTAARTQDIWGAGGYTWVYLDAIAQDEEACAR
VDVDFFIDGLRDIARARPEQETINLLAAYCTVTLRGNIGLHEEADLNRMQICDAADWLIRDHLTEVHPMI
WAHASEGFDNNMRVSSPSRFAARGRADALQIIASLFRDEIRNGNRVVFTPEGPQLHGA
>gi|56697684|ref|YP_168054.1| hypothetical protein SPO2846 [Ruegeria pomeroyi DSS-3]
MKLFVTGASGLVGGAVLRAGVAAGHQVAGLARSDRAAEQVSGDGGQVCRGDLRLPGGWVAEAVAADAVIH
AAATFGPDMGDVDRAAMEALVRAARRAGRRPRLIYTGGIWLYGDTCGQIRDESAPFDPATPWAWMLGTVA
MLEASDATDLAVLHPGAVYDSDGGGMLERFRVPEVEILGDPAIRWPLVHADDLAQAYLLLAGMQGQGGHF
LATAEPGRPVGEIARSVAGPDVPIRVLDRAEALARYGDSAVGPMLDQRLAAPRLRALGWCPRFDDVTHSL
>gi|56697685|ref|YP_168055.1| aspartyl/glutamyl-tRNA amidotransferase subunit B [Ruegeria pomeroyi DSS-3]
MLDLTFETPKPKTIAGAKHDWELVIGMEVHAQVASQAKLFSGASTAFGAEPNSNVSFVDAAMPGMLPVIN
EFCVEQAVRTGLGLKAEINLKSAFDRKNYFYPDLPQGYQISQLYHPIVGEGEVLVEMGDGTARRVRIERI
HMEQDAGKSIHDMDPNMSFVDLNRTGVCLMEIVSRPDIRGPEEAAAYIAKLRQILRYLGTCDGNMQNGNL
RADVNVSICRPGAYEKYQETQDFSHLGTRCEIKNMNSMRFIQAAIEYEARRQIAIVEAGGEVDQETRLYD
PDKNETRSMRSKEEAHDYRYFPDPDLLPLEIEQAWVDDIAASLPELPDDKKARFIKEFGLTDYDASVLTA
EVESARYFEEVAQGRNGKLAANWVINELFGRLKKEDHDITDSPVSPSQLGGIIDLIASDAISGKIAKDLF
EIVYTEGGDPAEIVEARGMKQVTDTGAIEAALDEIIAANPAQVEKAKVNPKLAGWFVGQVMKATGGKANP
GVVNQMVSKKLNG
>gi|56697686|ref|YP_168056.1| hypothetical protein SPO2848 [Ruegeria pomeroyi DSS-3]
MHPPGVVCARSKEALSMIRYEYKVVPAPEKGIKAKGVKTAPARFALSVEQALNQLAAEGWEYQRAELLPS
EERSGLTGSTTNWRNLLVFRRPLPAGPEVLPETEAKAEVEAPAPASDSADTPPLARPVPGPAEADRRAPA
PIAAPVNDPPMHGAKPADTPSAEPEPDREAKLDRD
>gi|56697687|ref|YP_168057.1| BolA protein, truncation [Ruegeria pomeroyi DSS-3]
MTIAEEMRARLQAAFAPTELEVVDDSESHRGHAGFREGGQSHFNIRIRAAAFAGQSRVARHRAVHAALGD
IVPRIHALALDIGT
>gi|56697688|ref|YP_168058.1| DnaJ domain-containing protein [Ruegeria pomeroyi DSS-3]
MSKSDPFGFDMSVSSAKKKNPRGRRGMSGASETSVRVCEHEGCTEAGKFRAPKAPDVLDDYFWFCQQHVR
EYNQKWNFFDGTTEAEMNAQMSKDKVWERKTRPMTDPEARAWARLGIEDPHQVLGANATQNPGRANTGRR
LPPTERRAIEILEAKDSWTKAEVRAAYKKLIKVLHPDMNGGDRSQEEQLQEVVWAWDQIKDSRNFK
>gi|56697689|ref|YP_168059.1| hypothetical protein SPO2851 [Ruegeria pomeroyi DSS-3]
MAVVCLRAGRPRIISARISRDCNSLSGAPERPGTAVFRRNRMAGRCLFIISFCLTRIGVKVWVTFVPREE
GQMALNIFGPPVINVPPATETITQLYTASKPAAWSVVVTGDGALTPADYSVTISGSGLLTVTLMPGVIVP
PGTALSLTISASSGPGAGNNGSLNVTVNLPAGVVPCFVAGSLIDTVEGPRPVETLAVGDLVPVEDGPPQP
ILWIGKRTLSIADLGANPHLRPVRIRRDALGPSCPHRTLWVSPQHRIVLQGWRAELFFGEAQVFAAAIHL
TNDDTIRQCRPNRAVTYYHLAFERHLLLRAHGLLSESIFLGDIAFLALRRSDVEELLVLFPELRSRTGRD
ASRTRLRCLTGSEARLAGARSGPGRRGQPRAPQSAIT
>gi|56697690|ref|YP_168060.1| CzcN domain-containing protein [Ruegeria pomeroyi DSS-3]
MDILPLLAPFALALSLFSALLLGGYLALNLWRPALALWPSASGWRHHLAFGLFRLFCGATIVFALSEAAV
NGWGHWLRFALGVPVMLAAFAITLWGYRFLGLDNTYCNSGGLVTGGIYAWSRNPQYVTSVMATLGLAIAA
GSVLTALLAGLLFLLYFLFILNEERWLLAGYGAAFRDYMRATPRFVDTRSLMRMRAALLG
>gi|56697691|ref|YP_168061.1| cobalt chelatase, CobS subunit [Ruegeria pomeroyi DSS-3]
MTAKSAHAALFAFSLRLGAIWCTPTRLARPDRRGKAIRTIGMADGTIPMNAKPTEEISVREVFGIDTPML
VKGFAERSDRVPEIDQTYKFDPDTTLAILAGFSHNRRVMVQGYHGTGKSTHIEQVAARLNWPCVRVNLDS
HISRIDLIGKDAIKLRDGKQVTEFHEGILPWALRNPVAIVFDEYDAGRADVMFVIQRVLEHDGKLTLLDQ
NEIITPNPCFRLFATANTVGLGDTTGLYHGTQQINQAQMDRWSLVATLNYLSHDAETMIVLSKAPHYNTE
KGRKQVSQMVTVADLTRTAFMNGDLSTVMSPRTVINWAQNAEIFRDVGYAFRLTFLNKCDELERQTVAEF
YQRCFDEELPESAASTSLG
>gi|56697692|ref|YP_168062.1| thermonuclease [Ruegeria pomeroyi DSS-3]
MIRAALVAAVVLGGCTPLPPTAVAYVPTRANAVCAITEVVDGDTLRLSCTEGRGGTVRLVGFDTPETYRP
GCAAEKARGEMAKRFLEAHLRQARVIRPDYQGKDKYKRLLVRFEVDGTNLAKTMVDARLAVPYAGGKRID
WCRKLAA
>gi|56697693|ref|YP_168063.1| cobalt chelatase, pCobT subunit [Ruegeria pomeroyi DSS-3]
MSKPTDNPADPFKKALAEATKVMADDPDLSVSYTVDPSGVSGDAMRLPQVSRRMTRDEVLLARGTADALA
LYRRYHDDATHSRYAPPGDMARDLYEAMETARCEAMGARDMPGTASNIDVKITHEALRRGYDQCKQPSEA
PLPVAAGYLVRHLATGRDLPAAAANVMNLWRGFIEEQAGGTLENLSDILSNQAEFAKFARQVIKDLGYGD
QLGDDPDEMDEDQEDQAEDDADEQPDPDSTGQDDQDDQDADADPEQSQEQQQDESQAQVSMDELADEELA
EETEMPDGEAPLEPPPPPPASEADPNYKVYLDTHDEEIAAEELAEPAELERLRAYLDQQLEPLKGAVSRL
ANKLQRRLQAQQNRSWEFDREEGILDAGRLARVVANPTTPLSFKVEKDTEFRDTVVTLLLDNSGSMRGRP
ISIAAICADVLARTLERCNVKVEILGFTTRAWKGGLAREAWLNEGRPQQPGRLNDLRHIIYKAADAPMRR
TRQNLGLMMKEGLLKENIDGEALEWAHRRMLGRREQRKILMVISDGAPVDDSTLSVNPANYLEKHLRDVI
AMVERRKQVELLAIGIGHDVTRYYQRAVTITDVEQLAGAMTEQLAALFDSDPRARARVMGMKRAS
>gi|56697694|ref|YP_168064.1| hypothetical protein SPO2856 [Ruegeria pomeroyi DSS-3]
MAYHAAMIRLAALFVSMCLALPLAAQEEEPPTPETARRNAADAISEKLANPANPGQARVSRLIKDGETIR
LCATSDARNARGTYIGRDYWEVTLSSDGKTVLRTRNVTGLLSHCYGAEYKPFKEMLEE
>gi|56697695|ref|YP_168065.1| M24 family metallopeptidase [Ruegeria pomeroyi DSS-3]
MYQSFEVTARPEQGPPRLEQLRAQMRAEGLSGFLVPRADAHQGEYVAAHDERLAWLTGFTGSAGFCAVLM
DVAGVFIDGRYRTQVKAQVADVYTPVPWPDVTLTAWLKEQLPQGGRVGFDPWLHAAGQIRTATGELKGSG
IELVPCDNLVDRIWQDQPPPPMEAVKAHPMEFAGESAPDKAARLAEDLRKAGQQAAVITLPDSIMWLLNI
RGADIPRNPVAHGFAILHADGRVDLFMAAQKLTGLGDHLDASVTQHEPDGFLDAVAALTGPVRVDLNTLP
QIVADRLGDRMSDGGDPCALPKARKNAAEIAGAAEAHLRDGAAMVELLAWLDAQAPGSLTETQVVTRLEQ
CRRRDNGLQEISFETISGTGPNGAIMHYRVTEETDSRLENGHLLVLDSGGQYLDGTTDVTRTIAIGAVGD
EEKACFTRVLKGMIAMSMLRWPVGLAGRDIECVARLPLWLAGQDFNHGVGHGVGAYLSVHEGPQRLARTS
HVPLEPGMILSNEPGYYREGAFGIRIENLVVVQEAAPLPGGDGERAMLDWRTLTYVPIDRRLIVADMLTA
EERRWLNAYHADVAAKIGPRLGAETRMWLDAATAPL
>gi|56697696|ref|YP_168066.1| hypothetical protein SPO2858 [Ruegeria pomeroyi DSS-3]
MSDHITIRKAPGKWSVRSGGAILGESSDALELSEGDLPPVIYFPRADIAMAFLDRSDKTTHCPHKGDASY
YSIVNRSSVTKDAVWSYEDPLPAMERIKGYLAFVLSDSVKVEQI
>gi|56697697|ref|YP_168067.1| 3-hydroxyisobutyrate dehydrogenase family protein [Ruegeria pomeroyi DSS-3]
MKVGFIGLGNVGGKLSGSLLRNGIDLTVHDLNPDLVAGFVSRGAKAAEGPAQMMRDCDAVITCLPSPAAS
AAVMAEMLPEVGPGKIWMEMSTTDEAEVKRLGEQVIARGGAAVDCPVSGGCHRADTGNISIFAGCDRATF
ERILPFLTVMGRRILHTGPLGSASVLKVMTNYLATANLLTCCEALVTMKAAGMDLNTTYEAIKISSGTSF
VHETESQVILNGSRDINFTMDLVKKDIGLFQSIAERTGVPLEISPLMISIFEDGIARYGMRAQSDDIIRR
LEEATGLDITAPGFPPEMVDDEPEEPGYEVVPQGLERQAG
>gi|56697698|ref|YP_168068.1| LysR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MARLPNPVWLRTFEAAARHLNFTEAARELGLTQTAVSLHIRSLEAELGEPLFTRAARRLGLTELGRSYAL
SVRQALADVALSTSSLFGPARRGILRLRAPISSAAYWLAATLPDFAADHPGIPVRLVSNIWDDGPAAGGV
DVDIRLGRGDWAGLVTEKLCDETIVPVIRAGAPEQPLPALQAHQLIHILGYEDNWPRWFAAQGLPAPTGG
SLYSVDTTVAALQLVMAGAGLAIVLTRFAQGAIAQGAPLRLAGPPIPFSQAHYLVRPERAAPPGAPAQLY
LDWLRARLAADAAG
>gi|56697699|ref|YP_168069.1| hypothetical protein SPO2861 [Ruegeria pomeroyi DSS-3]
MDPGGMREMSEHAPVELLVCTTCRRGLPVEDDAQRPGALLHRALSAAELPEGVILKPVECLSNCDQGCSI
VLRGGPARWTFVYENLNEADDVATIVEGVTKYHATADGLVPWRERPVHFRKNCAARIPPIGA
>gi|56697700|ref|YP_168070.1| CobW [Ruegeria pomeroyi DSS-3]
MSTLEKLPVTVITGFLGAGKTTLIRHLMQNPQGKRLAVVVNEFGDVGVDGEILKSCAIPECPAENIMELA
NGCICCTVADDFIPTIEALMALEPRPDHILIETSGLALPKPLLKAFDWPDIRSKITVDGVIALADAEAVA
AGRFAPNVAAVDAQRLADDSIDHETPLSEVFEDQISCADIILLTKPDLAGPEGVARAREVIAAEAPRPLP
VVEVAEGAVDVRVILGLGAAAEDDMDARPSHHDGHDDHEHDDFESIVVELPEQSDPAELVARIERLANEL
NILRVKGYAAVAGKPMRLLVQAVGARVRHQYDRPWQPGEERRSRMVVIAEHHDIDPAAINAILTGVSEPA
E
>gi|56697701|ref|YP_168071.1| cobaltochelatase subunit CobN [Ruegeria pomeroyi DSS-3]
MHVVFRESHGLEETETPTDLGQSPADLVVLSFSDSDLGAFAAGWHRGGGAVGKLPTLRLANLTALKHPLS
VDTYVDNTLSGAKGILIRLIGGVPYWAYGLQQVLALAQQKGLALAVLPADGREDTRLDAYSTLPVSTLRR
LQHLCDTGGEVAAQAALAQMALATGLYAGPVIGSKILPECGFWCPERGVIAPETVFEGNAPRILVTFYRA
YLTSADTASVAALIRAFRARGFQAMGMFAPSLKAPAAADWIAGQMPGLAPAAIVNATSFSGKGANGASPL
DAAGVPVFQVALATSRRKAWAEAERGLSPADLAMHVVLPEVDGRIDAGLISFKEPGKRDPALEYSRFAHR
PEPDRIEAVVNRVSGWLRLAAKPVAERVLALVLSTYPGKDWQMAHAVGLDALASAEAILCDLQDEGYDIA
SGQPITEELQTVSISWPITEYRKALASISPQLHQDLQSAWGDPESDPAFSQGNLQFRAIRRGKALVALQP
ERGTPEARDDDYHDLSRTPRHGYVAFYLWLRQALGADALIHIGAHGTLEWLPGKAVALSGQCWPEVLIGD
LPVIYPFIVNDPGEAAQAKRRIGAVTLGHIPPALRVSGTPDRMVQLEALLDEFSNADGLDPKRRDRLQGD
IRAEAQALGLEDDLGLDRATSTAEAITRIDRFVCDVKESQYGDGLHVYGRVPEVTGPFDPTPSAQGEARA
LLDALAGKRIAAGPSGSPYRGRSDVLPTGRNLYTTDPRSVPTRAAYAQGVKLAEELVRRHLQEEGDYPKG
LIVDLWGSATMRTAGEEFAMALHLLGVKPVWDQGSERVSGIEVLPITDLDRPRLDVTLRVSGLFRDVFPT
LSALFGQAVRALSARDEAPDWNPYAGHAPAARVYGPAPGSYGLGMGHLPETYTDEARQQAGEAWLAASSF
ALEGENIARDAEGIRARVANADGFVHLQDLAETDLLLAADYATHEAGFAAAKRVTGGEAQLYHLDNTNPD
TPRARTLPEEIARVVRARAAHPGWIAGMMRHGFRGAAEIAATLDHMASFAHLADSVAPHLFDLYHDATLG
DAKVAAFLQEANPQAYQAMLDRFRALYEAGLWQTRRNSIRADLEGLS
>gi|56697702|ref|YP_168072.1| CobG [Ruegeria pomeroyi DSS-3]
MNTPIVQGWCPGAHRPMMSGDGLVVRVRPRLARLSATQALGLCALAERFGNGTIDLTNRANLQLRGVAEA
DHQPLLAELAALDLLDGEPGIEVRRNILFSPLYRDGDMADRLGCELTARLGELPALPAKFGFAIDTGAGR
LLNADSADIRLERSPDGLILRADGMATGREVTEGEAIDRLIELARWFADRFDPDTRRMARLVQAVPLPAI
WQGAEPVPVGEPLTPGETALGPLYGAAFGQLPEPALAALLRDSGAVALRVTPWRLILLEGAQAIPAPDFV
TRAGDPLLTTDACPGAPFCPQAQAETRDLARTLAGRVSGSLHVSGCAKGCARMRPADITLVGNGGRFDLV
KQGRAGDEPCQRGLTPETLKTMDLT
>gi|56697703|ref|YP_168073.1| precorrin-8X methylmutase [Ruegeria pomeroyi DSS-3]
MPYEYETDGAAIYKQSFATIRAEADLARFDADEEQVAVRMIHAAGMVGLEEFVHFSPGFVTAARDALEAG
APILCDARMVSEGVTRFRLPADNTVICTLHDERVRPLAAEMGNTRSAAALELWRPHLAGAVVAIGNAPTA
LFHLLNMLEDPDCPRPAAIIGCPVGFVGAVESKDALWEAQPVPCCIVKGRLGGSAITVAAINAIASRAE
>gi|56697704|ref|YP_168074.1| precorrin-2 C20-methyltransferase [Ruegeria pomeroyi DSS-3]
MSAGTIYGLGLGPGDPDLMSVKADRLLRGARHVAYFRKPGRSGQARKIVNGMLSEGAVEFPMEYPVTTEI
PVTDPRYNQLLSEFYEAAAAHLRTLADAGEDVVVLCEGDPFFYGSFMHLYTRLRDLVPVEVIPAITGMSG
AWTATGTPITWGDDVLTVLPGTLPEDVLAARMAETDALVVMKLGRNLDKVVRALKTAGLFERAWIVEYAQ
MANQQVSRLSEKCSGVTPYFSIIIVHGQGRRP
>gi|56697705|ref|YP_168075.1| precorrin-3B C17-methyltransferase [Ruegeria pomeroyi DSS-3]
MSGWLRIVGLGPGSEALVTPEVTAVLEEATDVVGYIPYVARVAERPGLTLHASDNRVEIDRSRHALELAA
DGHRVVVVSSGDPGVFAMASAVFEAVEAGPRAWRDLDIQVLPGITAMLAAAARAGAPLGHDFCCINLSDN
LKPWPLIERRLRLAAQADFAMAFYNPRSKSRPEGFEKTLQILREECEPERLILFARAVSRPDEALRIAQL
AEATPEMADMQTVVLVGSSRTRVIERDGTPIVYTPRFTPE
>gi|56697706|ref|YP_168076.1| cobalt-precorrin-6x reductase [Ruegeria pomeroyi DSS-3]
MSHLLILGGTTEANALARAVAETGLRATYSYAGRVEAPRDQPIPVRVGGFGGAAGLAEFIHTNNVTHLVD
ATHPFAAQMSVNACAACTQTGTPLAALTRPAWQPGAGDNWRRVRDIAAAVAALEGVPQRVFLAVGRMHLE
AFAAQPQHDYLLRLVDAPSDPLPLPKAQVVVSRGPFTKEGDKALMQKHKTQLVVSKNAGGTGARAKLDAA
RDLGLPVLMIDRPVLPPRTELATPTDVLRWLRHSGVNLGV
>gi|56697707|ref|YP_168077.1| precorrin-6Y C5,15-methyltransferase (decarboxylating) [Ruegeria pomeroyi DSS-3]
MSDAPWLSVIGMGEDGLDGLPPASRQALDAAEVIMAPPRHLSLLPEGPQERIAWPVPYSDGLEILSGLRG
RHVAVLASGDPFWFGAGSVIARHFDAGEWRALPGVSTFSLAAARLGWPLEKTLTLGLHAAPLTRLRPYLA
SGLRALILLRDGAAVSELSRYLDQTGFAATRLHVMEALGGPRERLQTLSLAEAQAGDFAHPVCVGVEVAG
EGRAIPKASGRPDAIFETDGQITKRPVRALTLSALAPQRGEHLWDIGGGTGSIGIEWLMSDSTLRATTVE
PRADRAARIRANADALGQDHLRVVEGSAPEVLGSLARPDAVFIGGGLSTALLEWLFAELPAGTRLVANAV
TLESEALLALWQADKGGELLRIELAQSAPLGPRRGWKSAYPVVQWSVTL
>gi|56697708|ref|YP_168078.1| cobalamin biosynthesis domain-containing protein [Ruegeria pomeroyi DSS-3]
MIVAGLGFTTTAEATSLRAAYDKAAAGQAVAALATVADKAGHPALEALAADLALPLHLIPAAELAGQRTL
TCSPQSRASYGTGSVAEAAALVAAGPGARLITPRQISDDRRATCALAIGDKT
>gi|56697709|ref|YP_168079.1| precorrin-4 C11-methyltransferase [Ruegeria pomeroyi DSS-3]
MTVHFIGAGPGAADLLTLRGRDIIASCPVCLYAGSLVPEEILSHCPEGAKIVNTAPMDLDQIMAEIEAAH
EAGQDVARLHSGDLSVWSAMGEQIRRLKQMGIPVSVTPGVPSFAAAAAALGTELTLPGLGQSVVLTRTPG
RASSMPEGESLENFARTGATLAIHLSIGNLDKVIADLVPHYGADCPVAVVYRASWPDERIIRATLETLKD
ALDEDISRTALILVGPVLKGEGFDESCLYSREYDRRYRPQSADSPWSSWSHGDD
>gi|56697710|ref|YP_168080.1| cobyrinic acid a,c-diamide synthase [Ruegeria pomeroyi DSS-3]
MISAPASGTGKTTVMLGLLRALAEDGLTVQPFKSGPDYIDPAFHLAAAGRASFNLDSWAMGERLLGAVAA
QAAGADIVVAEGSMGLFDGVAKPGETGHGSSAETALRMGWPVVLVLDVGGQAQSAAATALGFRMYNPDLP
FAGVILNRCASPRHERLTRLGMERAGLPVLGVLPRRGDLTLPERHLGLIQAVEHPDLEAAIAGYAAFLRE
HVDLGAIRAAASSSPVGLSSAPLPPPPAQRIALARDAAFSFTYPHLLEGWRAGGAEILPFSPLADEAPAP
DADLVWLPGGYPELHAGRLAAAETFLSGLRKHAQTRPVHGECGGYMALGEALVDKDGSRHRMAGLLGLVT
SYEKRKFNLGYRRAELLAPLPGYGTGATLRGHEFHYSSILEQPDAPLARVFDAEGVEGPQTGSRRGNVTG
TFFHLIAEAGS
>gi|56697711|ref|YP_168081.1| uroporphyrin-III C-methyltransferase [Ruegeria pomeroyi DSS-3]
MSGFVSFVGSGPGDPELLTLKAVDRLGKADAVLFDDLSSGPILAHARPDADLVGVGKRAGRPSPKQDHVS
RLLVDYAQTGAHVVRLKSGDGGLFGRLEEELVALRAAGIGYEIIPGIPSAVAAAAAAGIPLTRRLTARRV
QFVTGHDISGKLPPDLNLPALADPQATTVVFMGKRTFPLLLDALEAHGLPRSTPALMAESVSTPEQRLTR
ATMGELAERLAEEVGTAPALILYGPLAEFSDD
>gi|56697712|ref|YP_168082.1| precorrin 6A synthase [Ruegeria pomeroyi DSS-3]
MTELLLIGIGTGNPDHITREGIAAIRAADLILIPRKGAGKSDLAGLRERIIAEATDTPPQIAYFDIPARR
AEDGYLKGVDDWHDAIALRWQAAIEEYPAAARVALLIWGDPSLYDSSLRIAARLDPQPKVRVIPGITALQ
ALTAAHGIPVNELGAPFLVTTGRRLRDEGWPPATDTASVMLDGECSFQALEMADYHIWWGAYVGMEEQIL
VAGPLDRVASRIIETRARARADHGWIMDIYLLKKRGN
>gi|56697713|ref|YP_168083.1| hypothetical protein SPO2875 [Ruegeria pomeroyi DSS-3]
MRRQGGNDMTTKTLKVSATGSAILPALFAVILGLGIVTLAGHVQASALHDAAHDVRHATGFPCH
>gi|56697714|ref|YP_168084.1| hypothetical protein SPO2876 [Ruegeria pomeroyi DSS-3]
MFSRILTSALFAGAAAGLIAALLQFLFVQPVLLHAELYETGELVHFGAEAVSAQPDLPGMFADPMRDALT
VVFAMLTYTGYAVVMVALMSVAEGMGHAITARAGLLWGLAGFITFHFAPGLSLAPEVPGVSYTDITARQI
WWTATVAAAGIAMWLIAFGGNLMAYGAAALLLIAPHLIGAPEPESFAGPVPTELGALFAARAFGVGMAAW
VLLGGFAGHFWQTEGKRANAHA
>gi|56697715|ref|YP_168085.1| hypothetical protein SPO2877 [Ruegeria pomeroyi DSS-3]
MSRSLALFAIGLVFGGGAGFVTAAAYGVTFDGHDHGDAAQHGAHDAAQAGHDHAEATHLPAGPDAPGVSL
ALTRDAMSGWNLRVSPQNFRFAPENASAMDHPGEGHAHVYVNGVKLARLYGEWLHIPDLPKGPVEVKVSL
NANSHSPLMVDGTPVEASLIVQVE
>gi|56697716|ref|YP_168086.1| hypothetical protein SPO2878 [Ruegeria pomeroyi DSS-3]
MRHICGTHQGVTMSDMRLSLCSSCLGDRDRDLAAERAAVTEALARAGLNGRVELVEHACFGACATPVALA
LQGVGRASYVFSDLDVVADADDIAATCRVYLDSPGGWIADARPCGRLRQCLLARIPAYST
>gi|56697717|ref|YP_168087.1| LysR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MLTRLKLKQLRLLVAVGERHSILHAAQALNMSQPAATKLIKDLELDFDVQLFDRTNRGMVPTVFGAALIR
HGKLILAQISHAAQELDDLNEGNGGRVVVGTLLAASAEFLPRVLTRLLTDKPGLVVKLVEGTNEVLMPAL
RSGDVDLVVGRLPMHRHRAEIMQERLFDEEVICVARTGHPVHRHAAPALTDLMGYPWILPPAETTLRRQL
DQVFVDLGGGAPPYAVESVSYLANRGLLVGSDMLAVMPAHVPRHDISAGALARVDWPVPIPIGPVGVSMR
KSASLSPSVAGVLDALRAEAAQMTR
>gi|56697718|ref|YP_168088.1| L-aspartate dehydrogenase [Ruegeria pomeroyi DSS-3]
MWKLWGSWPEGDRVRIALIGHGPIAAHVAAHLPVGVQLTGALCRPGRDDAARAALGVSVAQALEGLPQRP
DLLVDCAGHSGLRAHGLTALGAGVEVLTVSVGALADAVFCAELEDAARAGGTRLCLASGAIGALDALAAA
AMGTGLQVTYTGRKPPQGWRGSRAEKVLDLKALTGPVTHFTGTARAAAQAYPKNANVAAAVALAGAGLDA
TRAELIADPGAAANIHEIAAEGAFGRFRFQIEGLPLPGNPRSSALTALSLLAALRQRGAAIRPSF
>gi|56697719|ref|YP_168089.1| xanthine dehydrogenase family protein, large subunit [Ruegeria pomeroyi DSS-3]
MPIVDSRMQFRDLCPPGQACRIKATDTVAETPVTRSAPYTGQALPRREDPRLLRGEVRYAGDIHLPGALH
LAFLRSPYASGQLVACDTSAARAMPGVAAVLGVADLGALGGLQVNPVLPLDHATPYPILAGDTVSAVGQP
IAAVLAETPDQALDAVEEISAEIEETPAPPPELLAMQHWQSGDAAVEFARAAHVVAVRVAHPRLAPSPME
PRAIAVLPEGGGLTVWLSTQTPHRARADLARILSLDPAQLRVIARDVGGAFGMKASLYPEEVLAVWAAHH
LGRPVRWTASRSEEFLSATHGRGLSSEGQLAIDAEGRFLALKARVEAPLGHWLPNSALIPAWNAARILPG
PYDIPATDLGTSARRAHTAPTGIYRGAGRPEACALMERLADAAARATGLDPAEIRRRNLHRANGPRDLPA
GRVEGADYVTALNHFLTLADYPAWRARRDALRAGGALAGIGLGFYVEPSGKGWESARVTLEAGRATVEFG
GSSQGHGRETALAQIAADALDLTPADITVQHGDTATCPPGIGALASRSTPIGASAVLEACGEITRRRDAG
ETGPITADTIYTAPGEAWGHGCYLAAIEIDRDTGAPHLTRMACLDDAGQLINPLLAEGQVMGGFAQGLGE
AMMEALHFDDGQLLTGSFMDYAMPRAADLPPLTIHKTETLATTNALGAKGIGEAGTIGAPAAILNAALDA
LAPLGVSELQMPLTSLSLWQAITDASKGCET
>gi|56697720|ref|YP_168090.1| dihydrodipicolinate synthase family protein [Ruegeria pomeroyi DSS-3]
MRGIWAAALNPFAEDLSFDEAGFRRNIRHWVDDLGIEGLFICGKQGEFFSMSLEERKRNLEVAVEECAGR
AGTMMSVSDQNFDTVLELARHAQDVGADYIVVHAPVLHFVHDRDALLYEYYKAISEAVDIGIAMWSHPDS
GYLMSPELCTRIADLPNVVAIKYSVPREMYARLTELAGDRIQVSTASEEEWFDNIVELGWRLYLCSSPPY
QLQTANDRRMHDYTQLAFAGRIDEARAIRDSLDPVRQAIKSTKPGGKPQAHGKYWQELLGQTGGRVRFPM
QELTEAEKSATRAAFAACGLRL
>gi|56697721|ref|YP_168091.1| hypothetical protein SPO2883 [Ruegeria pomeroyi DSS-3]
MSEMNGAESLVRSLLQSGVDTCFTNPGTSEMHFVAALDQVPGMRSVLALFEGVATGAADGYYRMASKPAA
TLLHLGPGLANGISNLHNAKKAGSGVVNIVGQHAASHLELDAPLTADIEGLARPVSHWVETSLSAADVGR
DAARAVQAARSAPGQVATLILPSDTAWTPGGQVAPALPVPTREPVEAEMLEQAVAALSGPDSLLLLGGEA
LSAENLERAGRIAAATGCALLSEWANARVERGAGRVPVARVPYPIDMALEALSRFRRIVLLGARPPIGFF
AYPGKPAVLTHPEAEIIALADWAADLDGALAGLERAVGAAGVVPVLAPPVAPGTVSGPCTPESVAAVLGQ
HIPEGAIVVDESVTTGRAFHGATLGAAPHTWINNCGGSIGYSLAAAIGAAIACPDRRVMTLTGDGSAMYM
PQALWTMAREGLDITVVIWANRSYRILLGELSGVGVMNPGPRALDMLSLERPAIDWVAQAQSLGVPAVRV
ERAEEFAVALERGFAEAGPKLIEVLL
>gi|56697722|ref|YP_168092.1| hypothetical protein SPO2884 [Ruegeria pomeroyi DSS-3]
MKSGIKGQAKERPTMRLAILALITCLALPVLAGDLNPRPGWAVHATAKTHAQLVEDTRAAITANGLGIVT
QAGPTEAAARRGITIPGNRVIGAFNNDFAVRILALSTAAMIEAPIRFYVTENADGSATLGYKLPSQVFAP
YLDEAGAELAAIAAELDARFAAVAAQAIASQ
>gi|56697723|ref|YP_168093.1| acetolactate synthase, catabolic, putative [Ruegeria pomeroyi DSS-3]
MSDPLPRAADLLARRLYEAGCRHAFGMPGGEVLTLVDALDKAGITFHLAKHENAAGFMAEAVHHRDGAPA
ILLATLGPGAMNGVNVVANALQDRVPMIVLTGCVDADEALTYTHQVMDHAQVFRPITKGSFRLTAEGSDI
IADKAVSLAMQPRPGPVHIDVPIGVAATPVRETRRRRLTPAAPVAPGGTCLESARRWVAEARHPLAVIGL
DVLADGSKCVLQAFLEHFEIPFVTTYKAKGILPEDHRLCLGGAGLSPLADGHLLPLVQAADLILCLGYDP
IEMRPGWREVWDPESQRVIDISAVVNDHYMHQAGINIVADTGATLEAIAKGTTGHATWPGGEPQAARAAL
ARAFPQDEVWGPAAIIAETRATLPEGTLATADSGAHRILLSQMWRCDEPRGLIQSSGLCTMGCALPMAIG
LKLAEPDRPVISFSGDAGFLMVAGELSTAAEMGGNPIFLVFVDASLSLIELKQRGRQLPNRGVDFGHHDF
AAIGRAFGGHGHTVRSRAELRAALEAAQAADRFTVIAAEIARGDYDGRI
>gi|56697724|ref|YP_168094.1| CAIB/BAIF family protein [Ruegeria pomeroyi DSS-3]
MAGSEQPKGPLDGVRVLDLSRILAGPTCTQLLGDLGANVIKIENPGSGGDDTRQWGPPYVTDAEGNPSDL
SAYFMAANRNKKSVTLDISTPEGQAQIRRLAAHADILIENFKPGGLAKYGLDYASIGPEFPSLVYCSISG
FGQTGPNASKPGYDLMAQGFGGVMSLTGEPEGAPMKVGVGIADVMCGMYATVGILAALHHRERTGEGQHI
DLALVDAQVAWMINEGVNYLTSGALPQRRGNAHPNIVPYDLYATSDGHVVLAVGNDSQFRRVCEFLDLAA
LADNPRFATNQARLQNRATLDALLRPALAARSKAEVIAGLEARKVTVGPVQTIDQVFASDQVAARQMQID
MESQAGPVHLIGNPLKLSRTPVTYRRAPPRCGQDTETVLSSDDPFAD
>gi|56697725|ref|YP_168095.1| hypothetical protein SPO2887 [Ruegeria pomeroyi DSS-3]
MRDDVFGQSNSLTRADSAEAWDGVLLGFMAHAAVTPQHLARVLELEPDFALAHAIKGLFMLLLGRREMTP
VAIEAMAAAERAAAARAITAREGHYLAALRHWLAGNPSRSVQEFEAILRAHPDDTLAMKLSHATRFVLGD
PAGMRRSIERVMPAYAPDHAGRGYLLGCHAFALEETGAYDKAEIAGRQALWMVSDDAWGLHAVAHVHEMK
GQSELGLDWLAGREAAWSHCNNFRYHVWWHKALMHLDQGQIDQVFDLYDSAIRKDKTDDYRDISNATSLL
SRLELEGVNVGDRWEELADLSAARTEDGCLIFADLHYLLALTGDTREDAISRMLHRIKRDADMAQCDTTR
RMADPGLAAAQGLEAFGEGQYGQAFDHLLTARGSMQLAGGSHAQRDVFERITIDAGLRAGRLDAVERVLD
DRRAKRGGHEDTYALARRALIEAGRDDRNIHSVPAE
>gi|56697726|ref|YP_168096.1| hypothetical protein SPO2888 [Ruegeria pomeroyi DSS-3]
MIQKDQARMATISPAADFAPTATAPRAAATAARTRDLRLDFFRGIAMFIILVAHIPFNPWAGWIPARFGF
SDATEIFVFCSGMASAIAFGGAFLKRGWWMGTARIAFRIWQVYWAHIGLFFFTAMSMAALDLSGLFEKSY
VDGLNLQHFFGDPMPQMLGLFTLTYIPNYFDILPMYLVVLAMMPLMMGLRQVGFWAMALASVLIWAVAQT
GVLALPAEPWSDRQWFFNPFGWQLLFFTGFAFMRGWIPAPPVNKALIWAAALFVVLSAPFGSWKVFLWVD
AWNPTVSEPIRATWKVTGELRDKTDFALLRYVHFLSLAYLGWVVAGDKGARLLPQGDGALARAWQMVLNV
ILKVGQQSLAVFVFSMAAARLLGVLLDIAGRDALSVLAVNLFGFALITAVAYGAAWFKSHPWKSRT
>gi|56697727|ref|YP_168097.1| glucan biosynthesis protein G [Ruegeria pomeroyi DSS-3]
MMLSRRSFLASVSVLALVPRAFAAAPAEPFERAMVTALARDLASRPYAPRPGVPDPWQALTYEQYRSIRF
RIDHGLWAGTETPFSVDFFAPGLYFPRAVQVESVEAGMTRPVAFEMDMFDTGPEVPPLPVDEALGFSGLR
LRTEMHRPGETDEFCVFQGASYFRAIGLGEAYGLSARGLALKTGDPMGEEFPDFIRFWLERPEPGQRAMV
VHALMDSPSVTGAYRFEITAGEDTVMEVEATLFAREELDHVGLGPLTSMFLYDATDRTRFDDFRPAVHDS
NGLLIRNGAGEVIWRPLANPRALQISSFVDENPRGFGLMQRAREFSDFADLEAHYHRRPGLWVKPHGDWG
KGAVTLVEIPADQEIYDNIVAYWRPATPYAAGSEVTLSYRLTWGEEPHRTPLPRVIRTAMGDKTFGEGRL
VVIDFEASPLFDDAEGLEPIVQSPHAQIAPPVLQRNPDTGGMRLAFSFVPGEATLVELRAQLRRDKEAAS
EVWLYRWTA
>gi|56697728|ref|YP_168098.1| glucosyltransferase MdoH [Ruegeria pomeroyi DSS-3]
MDRVMRDDLHIMPPPAPLAMQAQDFSAGFRDALAPPDSPQRDVAPWRVLAFSPAMAATLALVWLMGDWFS
DSGISVLEAVLLALISFNFFWIAFAASTVLLGMLSLSRQPARARAGRAEPLKVALLMPVYNEVPWYVLGN
ARTMLEELKARGGQHQYAMFILSDTRDDAIAAQEQASVEALRTTLAPDLALYYRRRVENTDRKVGNIADW
VAGWGGAWDAMLVLDADSLMTGRAIARLTDALARDPGAGLIQSFPQLIGAQSVFARMQQFANGVYGAAFA
EGMARWCGQEGNYWGHNAIIRTAAFANCAGLPKLRSLSGREKLIMSHDFVEAGLLRRAGWSVRFLPRIRG
SYEETPPTLIDHVLRDRRWCQGNLQHLNLLNARGFRSVSRFHMFHGAIGYLMSPIWFALLVMWALIGHGQ
DGSVLQYFSPDNPLFPQWPEMTEGRHVLIIVVMYAMLLLPKLLGVLALPLSGAHYSDFGGAGRFLLSFLS
EVVLSILYAPILMVQQMIAVFRTFLGIQKGWSPQARDGGTYGLGTLVKCHMLETLSGLALGTGIALGLVS
VWLAPIALSLALAVPLSALSGVSAGTARRLIGMREEFREPAITRSARAYRNELKTLLERGSRIHPAE
>gi|56697729|ref|YP_168099.1| hypothetical protein SPO2891 [Ruegeria pomeroyi DSS-3]
MRRAAVLALLAGLWGQGAQAGCAAEAAPCETADGTYHIALPEAENPPVLIFLHGHGGEGAATLRNARLVA
PLLARGWAVIAPDGQSRAPGRPRSWTFFPGWEGRDEPAFLAQVLGEASARFGLDADRAVLGGFSAGAFMV
TYLACATPGAYRAYVPVSGGFWRPQPDRCAGPVHLFQTHGWADPVVPLEGRFLGGGRFQQGDIFAGLELW
RQTNGCVEHKPDGFDQTGPFLRRRWQGCSGGSLEFALFPGGHTVPEGWADMMADWVEALPAP
>gi|56697730|ref|YP_168100.1| hypothetical protein SPO2892 [Ruegeria pomeroyi DSS-3]
MSGTAILTHPMGRRAVLALGGAVLAGLAVREYLLTPEDFAGGDLSVEAAHEQANAGAVLLVDIRRPDEWA
STGVGAGAQPLDMRRADFVAALDQLAGGDRARPIALICARGVRSARLANQLAQAGFTSIIDVPEGMLGSR
AGPGWLRAGLPVVAHAEAQE
>gi|56697731|ref|YP_168101.1| putative monovalent cation/H+ antiporter subunit A [Ruegeria pomeroyi DSS-3]
MSLFLIAALPFLGAIFPALLIRAGRNASASAAGLTSFLAFTGLMIHAPTILAGGVVTARFDWLPVLGLNA
NFMLDGLGFLFATLILGIGMLIILYARFYLSRHDPMGQFFTYLLLFQGAMVGIVLSDNILLLLVFWELTS
LSSFLLIGYWKHLPEGRQGARMALAVTGSGGLAMIAGMLILGHIAGSYDLSVILQHKAAIQASPLYLPAL
ILILLGCFTKSAQFPFHFWLPHAMAAPTPVSAYLHSATMVKAGLFLMARMWPVLAGTPEWFYIVATTGLV
TMVVGAVIALFKDDLKALLAFSTVSQLGLITMLLGFGTKIAAVAAVFHIINHATFKAALFMSAGIVDHET
GTRDIKLLGGLRRMMPITFGIALIAGLSMAGIPPLNGFISKEMMLEETIHTVWLDSHIVVPALAIVGALF
SAAYSFRFIAHTFLGPEQESYPHSPHDPGPGLWLAPALLVVLVVVIGLNSTTVAGPLVKAAAGAVIGGEL
PYFKLKLWHGFAPALYMSIAAVLGGLLLLALHRHLERFWNALPRPEAKVIFDAVIETLTALSNRVTDGLH
NGVISRYAAIMVAFTVGIGYYAYATGSMGAPTRVPLPATIIPIIGWICLVGATLAIMWFHRNRLLSLVLI
GVVGLIVSMAFNYLSAPDLALTQISVEVVTMILLLLSLNFMPTETPVDSTNGRKLRDAAISIVAGIGAGG
LIYALMLRDFAFPTISEFHLANSYKGGGGTNVVNVILVDFRGFDTFGEIIVLGIAALVIFALTESVLATK
VRAYLLNRKPHWPQSGDAHPLMMVVVTRVMMPIALMVGAYIFFRGHNQPGGGFIAGLVVAIAFLMQYMAS
GFTWAAERQRFYYHATIGWGVLIAAATGLGAWFNDMPFLTSDFGYLHWPPLEEFEWATAMLFDTGVFLAV
LGAVMLTLESLSRFAWQPGMTQEFPMDINPAREALRQFVEETKQKMAEKGKTIDTEKGA
>gi|56697732|ref|YP_168102.1| putative monovalent cation/H+ antiporter subunit C [Ruegeria pomeroyi DSS-3]
MEALLASAVGVLTAAGIFLILRRRTFPVILGLSLLTYAVNAFLFATGRLALNAPPVLNKYKEVVYTDPLP
QALVLTAIVISFGMTAVIVMIALSAYLSSRDDRIDMSAQDSVDAAGEDA
>gi|56697733|ref|YP_168103.1| putative monovalent cation/H+ antiporter subunit D [Ruegeria pomeroyi DSS-3]
MNHWIIAPIVLPALLAPFIIMVLRYHLDLQRIFSVAGTVGLVGIALTLTAQASGGAVQVYELGNWPAPFG
IVLVLDRMSALFVLLTSLLALVVVLYAMGSGWDKRGRHFHPLFQFQLMGVCGAFLTGDAFNLFVFFEVLL
IASYGLMTHGGGAVRLKAGVQYVTYNLLGSTLFLFALGTLYAVTGTLNMADLAVRVAELPPEDTALLRVG
AVLLLLVFCIKAAVLPLHFWLPASYANAPLPVAALFAIMTKVGAYAILRMYTLVFGPDLAIAEGLAGAWL
LPAALVTLAVGAIGILGTRHIARMAAFGAIASMGTLLIAVSLFTPQATAAALYYAVHSTLAAALMFLVAD
LVMERQGGRIDGMPPMAQSGLIAVLFFIGSIALAGMPPLSGFVGKLLVMDAARDAGEFAAIWAMILISSF
ITIVGLARAGSLIFWQSHDERHNTEPDPENEDEVIHLPAPEPMPGLTFAAVFGLVAGLAALTLFAGPLMD
YTRAMAAQLYEPQAYIDAVLKGGGK
>gi|56697734|ref|YP_168104.1| putative monovalent cation/H+ antiporter subunit E [Ruegeria pomeroyi DSS-3]
MKLLRRIFPHPHLTLLLTLVWVLLANAPSLNSLLFGLILGIVIPFITQPYWPDRPKLRNWPMVVEYMLVV
LWDIVMANVTVAGIILFKRDADRKPAWISIPLELRSPEAITVLAGTITMTPGTVSCDLSERGLNLLVHCL
DAPDPDAVRDEIKQRYERRLKEIFE
>gi|56697735|ref|YP_168105.1| putative monovalent cation/H+ antiporter subunit F [Ruegeria pomeroyi DSS-3]
MILTYAIYFTFACFGAAIMMCLWRIITAEGVGTRVLALDTMVINTIALMILYGLTVGSEIFFEAAMIIAM
LGFVSTVAYARFMLRGNIIE
>gi|56697736|ref|YP_168106.1| putative monovalent cation/H+ antiporter subunit G [Ruegeria pomeroyi DSS-3]
MDQIWEITIAFFLIVSGVFGFVGSFGMIKLKDPMSRLHAPTKATTLGVGGVLIASILHSLTLEDHVSLHE
LLITLFLFLTAPVTALFIAKWHIHRHETPESLPPTGGDGRWATHAVEPDDDTPEHTAN
>gi|56697737|ref|YP_168107.1| selenide,water dikinase, putative [Ruegeria pomeroyi DSS-3]
MHTPPLPRTRDLVLIGGGHTHALVLRKWGMMPLAGTRVTVINPGPTAPYSGMLPGFVAGHYDRAALDIDL
VQLARFAGARVVLGAVQGIDLDQREIHVPGRPPISFDVASVNVGITSAMPEMEGFADHAIPAKPLGPFAA
RWAAYLAGAGPARVAVIGGGVAGAELVMAMAHALRSRGRAGQVTLIDRARVLAGLGPGAAARVRQAMVGL
GVTLVEGVEIARISAEAVELGDGRQIEADFITGAAGARAYPWLAETGLDTHEGFIAVDACLRSSDPMVFA
AGDCAHLTDTPRPKAGVYAVREAPVLYDNLRAALGAGHPRPYRPQSDYLKLISLGGKSALAEKWGRVFAG
PAMWRWKDRIDRTFMDRFRDLPQMGQPALPELHSAGLNEALGDKPLCGGCGAKVGRAALRAALAPLPGMV
RNDVTPLPGDDAALLTTGGVRQVMTSDHLRALAEDPVLMTRIAAHHALGDIWAMGAAPQAATATVILPRL
SPELQQRSLAEIMAAATEVMRAAGAEIVGGHSSVGDELTIGFTLTGLCTQAPITLGGGQPGDVLILTKPL
GSGVLMAAEMAGRAPGADVAAAYALMTMDQGPAARILGAAHAMTDVTGFGLAGHLHGLCEASGTGAELDL
AAVPLMAGALALSEAGHRSSIFADNRALVPGLPATGAAALLFDPQTAGGLLAAVAPDQADVCLADLVKAG
YPAARIGELTQTPGLRLAR
>gi|56697738|ref|YP_168108.1| tRNA 2-selenouridine synthase [Ruegeria pomeroyi DSS-3]
MALEFTTLPQLYAHDYDTVIDVRSPAEFAEDHLPGAINLPVLDNEERARVGTIYKQQSPFLARKLGAALV
FRNAASHVEQSLSHHEGHWRPLVYCWRGGQRSGSFTWMLQQIGWRAEVVSGGYRTYRRLVNRYLYEDPLP
HRLVALDGFTGTAKTEILARLPALGVQMLDLEALANHRGSLLGARPGGQPEQKAFESALAAALCRLDPTR
PVVVEAESSRIGERILPPSLWAALCAAPRIEIEAPVAARSAYLTAAYDDILSDAETLTARLDPLRYHRGH
AVVEGWLALVAAGDKHGVTRALMEQHYDPAYRKSRASHAVQVAARLRSDTLDHAGIDTLTAQVAAVLKAL
>gi|56697739|ref|YP_168109.1| hypothetical protein SPO2901 [Ruegeria pomeroyi DSS-3]
MCGRIANTLPSDAMARLFQAQPANDLPAVPNYNICPTNPVHVVRAGPGGRNLLAMRWGFLPQWYKSETDG
PLLINARAETLAEKPAFRAACRQRRCLIPSTGFYEWTRPGGDVRLPWYIHRRDGAPIAFAGIWQDWGPEA
ARQPTCAIVTTAANRHLGQLHHRMPLILEPDDWPLWLGEAGHGAARLMQPGAEEVLDYHRVDPAVNSNRA
SGPDLIEPFDG
>gi|56697740|ref|YP_168110.1| glutathione S-transferase family protein [Ruegeria pomeroyi DSS-3]
MKLHVFPPSPNSRKVLVVNAHLGLNLPVALVNLATGEQLAPGFVALNPNAKVPVLEYDDGSTLWESNAIM
ARLCAETETSLWPKSDIRYDILRWQYWETAHWTPALSPFISRHIFGQMDADLETAATQVARYAAVLDSHL
AGRDWLVGDGMTLADITLACILSLRDQCHYPLEGYANIHRWIAAIEAVPAWQSVEAQVQQVLAKVQAAS
>gi|56697741|ref|YP_168111.1| TPR/sulfotransferase domain-containing protein [Ruegeria pomeroyi DSS-3]
MTLDPTPALSALRSGDFRTVQKLARRALKLAKGDPGWLNLAAIAESGLGRPKAALPHFQLALKLAPDFHD
ARRNLAQTLVILGRLDEAERHLQQLTGTNPQDAEAWALLSQAAMGRGDGDAALAAADRYVDLRPGQARGL
MLRATLHGRLGDEAAALADLQQAQMAEPDNVDLLIALSLPLARADHPGAAIDVARRAVELAPRHIPARLT
LAMRHVEQGDSDAAKAMYHRVLEIAPDQAEALEQLAHLNDAAENQRLAPQVQTALKTAEAGSLDKAQLHF
ALARIAAQSADDDGLARNLTRANATMARLMPYDAGADTRLSEALMARFAPGADCDGPGDGPAPFYVLGLP
RSGTSLTEAVLGAHPVVHPLGERIAPGRLLAPLIDGGLPFDAQARAAFRKGEAASLPALPEGTRFYTDKM
PENYRLVGFLLAARGDARVIHLRRDPRDVALSLWQAHLAGSALNYAYDLGAMAHRFNLYARMMAHWRAIF
PDRILDLPYEELVADVTRASQRLAEWLGLVWDPEMARPERSTSQILTLSASQLRQPVHTRSVGKWRKHEA
MLAPFIAGLDPGLWPELGQSGI
>gi|56697742|ref|YP_168112.1| Ser/Thr protein phosphatase/nucleotidase, putative [Ruegeria pomeroyi DSS-3]
MFTRFMTSVAALGLTAGMAAAEYKLTILHTNDFHARFEPISKYDSGCGAEDNAEGKCFGGTARLVTAIEA
ARARAGNAILVDGGDQFQGTLFYTYYKGKVAAEFMNKLGYDAMTVGNHEFDDGPEVLRGFMDAVSFPVLM
SNADFSGEELLATKLLKSTVIEKGGEKIGLIGLTPEDTHELASPGPNISFSDPVPAVQGEVDRLTAEGVN
KIIVLSHSGYGTDQRVAAETTGVDVIVGGHSNTYLSNVSDKASGPYPTVVNGVQIVQAYAYGKFLGELNV
TFDDAGNVIEAVGEPLIMDATVSEDTATVARIQELAVPLEEIRNKVVANAAAPIEGSRDVCRVQECQMGN
LVTDAMLERVADQGVTIAIANSGGLRASIDAGEVTMGEVLTVLPFQNTLSTFEATGALIVEALENGVSQA
EEGAGRFPQVSGLTFTWDSAQPAGSRIVEVMVASEDGFVPLDLTGTYMVVTNNYVRNGGDGYAMFSGDDK
NAYDYGPDLADVTAEYLAANAPYQPYLDGRIVKK
>gi|56697743|ref|YP_168113.1| hypothetical protein SPO2905 [Ruegeria pomeroyi DSS-3]
MLIYKIFRADEWAALERDGQSVGAPVDLADGFVHFSTAEQAGETAAKHFAGAEGLVLLACEADAMGDVLK
WEVSRGGALFPHLYRELRLSDVLWSQPLPLVDGIHRFPQEMT
>gi|56697744|ref|YP_168114.1| hypothetical protein SPO2906 [Ruegeria pomeroyi DSS-3]
MTGYIDPDRAQFEAFKALDRDHPIEMLNLVKFRDRAAYPEGHELANAGLSGAEAYRNYGRETAPVIARLG
ASIVWRGTFQTVLIGPGDEVWDEMFIARYPSGHAFLEMVTDPAYRQAVVHRQAAVETSRLIRTKPGTGGT
SFG
>gi|56697745|ref|YP_168115.1| dihydroorotate dehydrogenase 2 [Ruegeria pomeroyi DSS-3]
MIERLGLTALHRLDPETAHGLSIKALKAGLVPLPGPVTSTRLRTRVAGLDLPNPVGLAAGFDKNAEALAP
LARAGFGFIEVGAATPRPQPGNPRPRLFRLTEDRAAINRFGFNNQGMEAIAVRLAKRPRDAVIGLNLGAN
KDSSDRPGDFARVLAHCAAHLDFATVNVSSPNTEKLRDLQGRAALTALLSGVIETRDALARPIPVFLKIA
PDLSKDEIADIAAVARDTGVDAVIATNTTLSREGLHSAHKDEAGGLSGAPLFDKSTRVLARLSALTDGAI
PLIGVGGISNAEQAYAKIRAGASAVQFYTAMVYGGLALAAEIARGLDALLARDGFASVAEAVGTRREDWL
>gi|56697746|ref|YP_168116.1| arsenate reductase [Ruegeria pomeroyi DSS-3]
MIEYWHNPRCSKSRQGLALLEERGAEIELRRYLEDAPSLEELRATQAALGVSAIAMMRTGEARFKELGLS
KSDPDAVLLAAMAESPVLIERPLAIKGDRAVIGRPPEDMLSLLD
>gi|56697747|ref|YP_168117.1| DNA-damage-inducible protein F [Ruegeria pomeroyi DSS-3]
MSDAAPITHQRVLKIAVPIMLANMTVPILGAVDTAVVGQIPQAAPIAAVGVGAIILSAIYWIFGFLRMGT
AGLTAQAHGAGHEGEVAALLTRSLMIGVAGGVALILLQLPIYWGALAVSPASAEVETLARGYMSIRIWSA
PAAIAIYGITGWLIALERTRAVLVLQLWMNGLNMGLDLWFVLGLGWGVNGVAFATFLAEWTGLAFGLWLC
RDAFLNPRWRDWARVFEAARLRRMAVVNTDILIRSMLLQAIFVSFLLLGGRFGDVTLAANQVLLQFVHIT
GYALDGFAFAAESLVGQAFGAGAVARLRRAAWMTSLWGLVLALLLAVVFWALGPWLIDVMTKDPAVQLAA
RDYLAWMVAAPLLILALVMFDGIFIGATRSADMRNMMALSAAIYFATVWLLIEPYGNHGLWMALTISFIA
RGITLGLRYPALERAAVSPAG
>gi|56697748|ref|YP_168118.1| thioesterase family protein [Ruegeria pomeroyi DSS-3]
MARTRPEPMQVVKQRRDAALNALVSGVPFIRFLNITFDRRGDELTGVLNFDDKLIGNPFLPAIHGGVTAA
FLEVTAVITLSWAHLFERIESGDLAPEDILTDENMRFPKTIDFTIDYLRSGLPRDAYARAYISRAGRRYA
SVRVEAWQDHHDKLYAQGTGHFLMPQDPGPES
>gi|56697749|ref|YP_168119.1| thioesterase family protein [Ruegeria pomeroyi DSS-3]
MSCPVHKGAKQRQDRRHMTDKVKLARQFIQAIPHAKALGLELTYIGQGEAEISMPYNAELVGDPRTGVIH
GGAVSAMLDTCCGAAVMSHPSAPGGTATIDLRIDYMRAATPGQTITTRATCHHITRNVAFVRAVATDDDT
DRPVATAAGAFTVEGR
>gi|56697750|ref|YP_168120.1| MerR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MPETRLSFKEMCAEFDVTPRTLRYYEYIELLQPDREGRARYYGARERARMKLIMRGRRFGFALEEIRQWL
LIYEDEGNQAQMAAFVEMADRQMHELRLQQQQLDEAMSELQQLRDQTARGIK
>gi|56697751|ref|YP_168121.1| hypothetical protein SPO2913 [Ruegeria pomeroyi DSS-3]
MPNPVALVTLTLAALMLAACDPGPTGHGTAPAGVDQADWDRQIAARRQARSDVYRGPRGGATGR
>gi|56697752|ref|YP_168122.1| MerR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MTEDLMTIREMCDAYDVTPRTLRFYESKELLFPVRDGQKRLFTKRDRARLKLILRGKRFGFSLEQIRQLL
DLYHVGDQQHMQLNRTYQIAHERLADMESQRDELTQAIDDLREQLRWGEKVLASMKDTKKAAE
>gi|56697753|ref|YP_168123.1| acyl-CoA dehydrogenase family protein [Ruegeria pomeroyi DSS-3]
MPIYTAPTKDTQFILHDVLKVSQSDTPGYAELDADFTGAVLEEAGKIATNVLHPLNIVGDTEGCRLENGV
VYTPTGFKEAFEQVKEGGWTGLDMPEQYGGQNMPQVIGTAVGEMFSASNQAFTMYQGLTHGAASAILAHG
TDAQKDTYLPKMVSCEWTGTMNLTEPHCGTDLGMMRTKAEPQGDGSYKITGQKIFISSGDHDMADNIVHL
VLAKITGGPEGIKGVSLFIVPKFMVNEDGTLGARNAVSVGKIEEKMGIHGNSTCVMNYDGATGYLLGEEH
KGMRAMFTMMNEARLGVGMQGLAQADAAYQNALEYAKDRLQGRDVTGVKNPEGPADPLIVHPDIRRNLMD
QKSFTEGARAFLLWGATLIDAAHRAGDKDADGLVSLLTPVIKGFLSDQGYDMTVQAQQVYGGHGYIEEWG
MSQYTRDARIAMIYEGANGVQALDLVGRKLAADGGKHVMAFFELVKSFCKENAGQDEAYDKAFIEPLKAA
SKDLQAAGMYFMQNGMKNPNNALSGSYDFMHMFGHVCLGLMWAQMAKAARTALDGGASDTAFYETKIATG
RFYMARRLPATALHLARIQTGADTVMALDAANF
>gi|56697754|ref|YP_168124.1| hypothetical protein SPO2916 [Ruegeria pomeroyi DSS-3]
MPKRFRLTRRFPVAMTEDGYRRLKSFSREAGLDEGEALSFLFENFNSVINEENLIHRLRLFNAELDDRKR
>gi|56697755|ref|YP_168125.1| glutathione S-transferase family protein [Ruegeria pomeroyi DSS-3]
MMTIKLYCFGESGNSYKAALALQLSGLDWEPVFVDFFGGETRTPEYRTTVNELGEAPVLVDGEFRTSQSG
CIQAYVTEASGKFGGKTREENYDILRWVLWDNHKLSSMAGLTRFLMNFLPEDKRPQEVIAFNQGRLKAAY
ATLNSHLEGRDWIVGVGPTNADLSCCGYLYYPEPFGFDRADWPHIDAWLDRIAALPGWKHPYDLMPGNPS
DRA
>gi|56697756|ref|YP_168126.1| acetyl-CoA acetyltransferase [Ruegeria pomeroyi DSS-3]
MTEAYIYDAVRTPRGKGRKDGSLHEVTSVRLSALTLNALKERNNLEGHAVEDVIWGNVTQVMEQGGCLAR
TAVLASDLDQSIPGLAINRFCASGMEAVNLAANQVRGGAGDAYIAGGVEMMGRVAMGSDGAAIAVDPSIA
METYFVPQGISADIIATEYGFTRDQADALAMESQRRAKEAWDEGRFAKSVIPVRDQNGLTILDHDEYMRP
GTDMQSLGGLNPAFQMMGEQMPGFDKIAMLKYPHLERINHIHHAGNSSGIVDGAAGVLIGNKEFGEKYGL
KPRARIKATAKIGTDPTIMLTGPVPVTEKILADNGMKIGDLDLFEVNEAFASVVLRFQQAFDVDPALVNV
NGGSIAMGHPLGATGAIIIGTLLDELERRDLETGLATLCIASGMGAATIIERV
>gi|56697757|ref|YP_168127.1| hypothetical protein SPO2919 [Ruegeria pomeroyi DSS-3]
MPKLDLDSIERRIGSVYPGRLNAAMDGRSSLRLGDAGGLSQFGVNLVRLEPGAKSSLRHYHMEQDEFVMV
TEGALVLVDDQGEHPMVPGDCAAFPAGDPNGHQFVNRTDAPATFLVVGTRTPTETAYYSDMDMMVKQDAS
GFAFTRKDGSPLTADQIGDDNE
>gi|56697758|ref|YP_168128.1| fatty oxidation complex, alpha subunit [Ruegeria pomeroyi DSS-3]
MSDFTLTKDADGVAFITWDAQGKSMNVMTREAFELVDSLVDQALADDEVKGIVITSGKSDFAGGMDLNTL
AVIREEAGENPAQGLFDFVMGGHRIMRKLELAGMDPKTKKGGKPVACAINGTCAGIGTEIALACHHRVMT
TNPKAKIGLPEILLGIFPGGGGTIRYSRMVGAMAAAPVLLEGKMMDPAKAKGAQMVDALADDPVAAAKEW
VLNAKDADLVKPWDAKGYKMPGGAPYHPAGFMTFVGASAMVNGKTQGAFPAPKALLSAIYEGALVDFDTA
LRIEARWFTHVLMNPSSSAMIRSLFINKQALEKGAVRPKDIPDQRVKKLGVLGAGMMGAGIALVSAQAGM
EVVLIDRDQAAADKGKAYTEAYLDKGMKRGKVTAEKKEAMLGLITATPDLDALKGCDLIIEAVFEDPGVK
AEMTKKVEAIIPEDCIFASNTSTLPITGLAKASVRPEQFIGIHFFSPVEKMLLVEIIKGKETGPRAVAKA
LDYVRQIRKTPIVVNDARFFYCNRCIIPYVNEGARMITEGVSPVLIDNAARQLGFPVGPIQLTDETSIDL
GAKIARATKAAMGNAYPESPADDLIFWMEELGRMGRKANAGFFDYDDKGKRTGYWQGLQDKYPLAEEQPD
LIEVQERLMFAQVLEAVRALEEGVLEDIREGDVGAILAWGFAPWSGGPLSWIDIIGTPYAADRCDQLAAK
YGERFACPPLLREMADKGQSFYGRFDPEAKSAA
>gi|56697759|ref|YP_168129.1| hypothetical protein SPO2921 [Ruegeria pomeroyi DSS-3]
MGTALMFGWKDKDTGESPAMAESMAVLDGLLITGQGGLLAGTSVASNFGWQPVEALKVGDKVLTFDHAMQ
TVADIQRETVTLPAGLPAALRPVRLPEGVCHNRRDLWMMPDQGLLVECEAALDALGDPYAVVPARMLRGY
RGITDDLPGERVEVTTLAFHQDEVIYVEGGLLAHCPVPRQVLDGADLLQPTLYDRLDGAAARFLVNCLID
DDDDHALGCDPADLPNLPMRPPRPGHPLAANPFA
>gi|56697760|ref|YP_168130.1| hypothetical protein SPO2922 [Ruegeria pomeroyi DSS-3]
MIISPGRGYIFVHIPKTGGTSLALALEARAMKDDILIGDTPKAIRRRGRLKGVQARGRLWKHSTLADIEG
LIAPEVLAGLFAFTLVRNPWDRAVSYYHWLRGQTFDHPAVHLARQLEFEGFVTAPQTLAAFRAAPAPSYM
RRVDGVEHCAAYIRLEHLETDLAPLTAHLGFALDMPRANRSERAADYRSYYSDHAAEALGAACASDIARF
GYRFD
>gi|56697761|ref|YP_168131.1| hypothetical protein SPO2923 [Ruegeria pomeroyi DSS-3]
MQAETNSAPLAAALYMIAAMSIIGVIDNYVIRLAESIGLWQFHFMRSLMMLPLVGLMSLMGLGGLFPRRK
GWVLLRSLLLTVAMLFYFSALAFMPIAQALAGLFTSPIFVLLVTAFGLRQRIGPWRILAVLMGFAGILFV
LQPDPGAFDATVLIPVAGGFFYALGAVVTRRHCAGESTAALLGAMVTALGLTGLGGLIWLALFPATPLPG
PDGFVARGWVWPMAEAMPWVALQAVGSATAVFMLIRAYQLGEPSYVSVFEFSVMIFGPLFAWVVLGVGLG
PWQMLGIGLIVLAGAIIALRSG
>gi|56697762|ref|YP_168132.1| hypothetical protein SPO2924 [Ruegeria pomeroyi DSS-3]
MSPSDTLPGLLPAAPGTAQPVCRWPAKGVGWPKNKNEHPVSGMTALKQYERIEATGLWRPSPEAQRREVV
VSIGEATLTISDFNDRALTHWSLAALERQNPGEFPALYCPDGDPGETLELAESESTMIAAIDHLQRAIDS
RRAHPGRIRWITVAVMVTIVLGMLTLWLPGALRRHVVAVVPEIKRQEIGRAVLARVERVTGQACSDEETD
MILSRLAQRTGVRRLVVVPGGRASSLFLPGGIVVLNHALIGDHEDSSVAAGYVLAERARANAQDPLDDLL
YRAGPLASFRLLTTGGLTPGILDSYAERVLAEPRPDMPDEALLAVFSQAAIPSSPYAYARDITGETVLGL
IEADPMTGRTLEPVLADRDWVRLQDICGG
>gi|56697763|ref|YP_168133.1| hypothetical protein SPO2925 [Ruegeria pomeroyi DSS-3]
MGGPSRFRCLSAARAGRGRWRRGRCVARGQSKPQGRLGPVGIGPFAVFHSNGSGVGLDRQQGARQVARPE
LFHLCVPLGGPHAAQGVQPVILAVDGPEPGRGLKAAVLDRRAQRAFSAMGIQPVVGPDRAKSLRYLQIGG
VLPLVIDMLRHHPGVERDPDAGIPHLERGTLAGAIGDRRFRLRAAAHTGLVDVTLAEGRGIGTPARCRRR
GNRARLDPRRSRGRGNRYDHRCRARGGGTGGGHSDRAHGGADRGHRGGARHGAGHRAHLRFRRGRGGGSG
RGCRGGPRGRCRAGLIQRDHLGGGLLRRGAGRPGHGGGLVATDLLALARDARDPGHIAVDPGPDIDTSAA
VDILLALEGGGRKFGRRRGISQRLGVQRAEPDAQTDDRKCNNPCNSHACPHKIWKAGCRKTY
>gi|56697764|ref|YP_168134.1| uracil phosphoribosyltransferase [Ruegeria pomeroyi DSS-3]
MNEHLTVVDHPLVQHKLTLMRDKGTSTASFRQLLREITQLLAYEVTREMPLTTRTIETPLEEMEAPILAG
KKLALVSILRAGNGMLDGVLELVPSARVGFVGLYRDEETLQPVQYYFKVPEGLQDRLVIAVDPMLATGNS
SAAAVDLLKQAGATDIRFLCLLAAPEGVARMKEAHPDVPIVTASLDRALNSKGYIMPGLGDAGDRMFGTK
>gi|56697765|ref|YP_168135.1| adenosine deaminase [Ruegeria pomeroyi DSS-3]
MSEEHPPVADLPKVELHLHHEGAAPPALIRQLAHEKKIDLRGIFKPDGSYDFRDFAHFLSVYEAASSVLT
GPEEFRRLTWAILEQSAENGVVYSETFLSPDFCGGGDVAAWRDYLAAIRDAADEAEAKLGITLRGVVTCV
RHFGPDQARRAARCAAETAGDWIVGFGMGGNEGVGKQGDYSWSFDCAREAGLRLTTHAGEFGGPDSVRDA
VRVLGVERIGHGVRAIEDADLVHELADRGITLEVCPGSNVVLGLYPSFAAHPIARLRDAGVRVTISTDDP
PFFHTTMRREYEMLAKAFGWGAEDFADLNATALRAAFCDEDTRSRVAKRLETS
>gi|56697766|ref|YP_168136.1| phosphopentomutase [Ruegeria pomeroyi DSS-3]
MTRAFLVVMDSVGIGGAPDADTFFNGDRPDTGANTLAHIAQACARGAAEEGRSGPLHLPHLDRLGLGAAT
RLASDAATPGLAAEASGLWGCAREHSRGKDTPSGHWELAGLPVPWDWHYFPDTIPAFPNDLVQAVAQAAG
SDGILGNCHASGTVIIDRHGAEHMRTGQPICYTSADSVFQIAAHEETFGLDRLLALCKAVAPRLHAMKVG
RVIARPFVGTPEAGFTRTTNRKDFAITPPAPVLTNWAQDAGRRVHGVGKIGDIFSMQGIDDVVKGSDAEL
MTHLARLIGTAEEGSLTFANFVEFDSLYGHRRDISGYARALEWFDREIGQILQSLRPGDLMVLTADHGND
PSWSGTDHTREQVPVLVAGRGAGQIGQVNFADIAASVAAHLAIPAQGPGRSFL
>gi|56697767|ref|YP_168137.1| thymidine phosphorylase [Ruegeria pomeroyi DSS-3]
MDARAIIARLRRHEVPSAAELTWFAQGLADGSVSDAQAGAFAMGVCMGRLGSEGRAALTLAMRDTGDVLH
WDFDGPVIDKHSTGGVGDCVSLVLAPALAECGTYVPMISGRGLGHTGGTLDKMEAIPGVTTQLGPDRLAQ
VVRDTGAAIVGATARIAPADKRLYAIRDVTATVESLDLITASILSKKLAASPDALVLDVKLGSGAFMKSP
DEARALALALTETANAAGCRTSALITDMSQPLAPSLGNALEVGEVMRVLTSGHADDPLAQLSAELGGVLL
SDAGLATDAVSGAARIAAIISDGRAAERFGRMIAAVGGPVQFVENWQRFLPEATVIREVPARASGYVTAI
DGEVLGLAVVALGGGRQVETDVVDPAVGLSRVIRLGTAVNPGTPLATIHAARQEAAEAAEATLRAAITIG
PEPVAAPPLIHERITP
>gi|56697768|ref|YP_168138.1| cytidine deaminase [Ruegeria pomeroyi DSS-3]
MSLKSAALTVRENAHAPYSRFKVGAAIRGASGVVYAGCNVENIAYPEGTCAEAGAIAAMVAAGETRLSEV
YVVADSPAPVPPCGGCRQKLAEFGDPDVVVTMANLDGVETAMTIGQLLPGAFGAAHMDKG
>gi|56697769|ref|YP_168139.1| hypothetical protein SPO2931 [Ruegeria pomeroyi DSS-3]
MTLGKPGFSRNMVAARLAKGGRSRHSRAPREDPMTDTIAEMRLPTQELRDDIPFYTKVLGMRMDMIYPAD
DPRIAVFSGHGLRLRIEKGAPESPGTLRILTEDPDGFADCQRSLTAPNGTRIEIEERHPPLVMPQTEHTF
VVRRLKDQAPWIIGRAGMHYRDLVPSRLGGSIIASHIRIPDGGPVPDMVHFHRVGFQLIFCIHGWVDVVY
EDQGDKMRLTAGDCFIQPPEIRHRVLEASDNVQVIEIGVPAEHVTEIDHEMMLPTPHLRPEREWQGQRFV
YNRAEGAEWSPFRLPGYIYRDTTIAENTKGVAGVQVVRRGQGAPQWAAHDTDILFTFVMNGTVTLMGEGR
DPYPLEQGDAFVIPPGMRTCLSDPSDDVELLEVTLPGTFTTTLG
>gi|56697770|ref|YP_168140.1| malic enzyme [Ruegeria pomeroyi DSS-3]
MSDQPSLRQAALDYHAFPKPGKLEIRATKPMANGRDLARAYSPGVAEACLEIKDNAAHAETYTARGNLVA
VVSNGTAVLGLGNIGALASKPVMEGKAVLFKKFAGIDCFDLEVNESDPEKLADIVCALEPTFGAINLEDI
KAPDCFIVEKLCRERMNIPVFHDDQHGTAIVVGAAARNALHVAGKAFGDIKIVSTGGGAAGIACLNMLVK
LGVKRENIWLCDIHGLVYEGRAEDMNPQKAAFAQATDLRTLDDVIAGADLFLGLSGPNVLKPEMVARMAK
RPIIFALANPTPEILPDAARAVAPDAIIATGRSDFPNQVNNVLCFPFIFRGALDVGATEINDAMQIACVE
GIAELARITTSAEAAAAYQGEQLTFGADYLIPKPFDPRLVGVVSSAVARAAMESGVARRPITDLEAYRQK
LNQSVFKSALLMRPVFEAAAKAARRLVFAEGEDERVLRAAQAILEETTETPILIGRPEVIEARCEKMGLS
VRPGQDFQIVNPENDPRYYDYWTSYHQLMERRGVTPDIAKAIMRTNTTAIGAIMVHRGEADSLICGTFGE
YRWHLNYVEQVLGSKDLRPHGALSLMILEDGPLFIADTHVRSRPSPEELAEITLGAARHVRRFGIEPQIA
LCSQSQFGNQAEGSGQRLRQAIEILDSRPRDFVYEGEMNLDSALDPELRQRIFPNSRLYGAANVLIFAHA
DAASGVRNVLKMKANGIEVGPILMGMGNRAHIVTPSITARGLLNMAAIAGTPVAHYG
>gi|56697771|ref|YP_168141.1| hypothetical protein SPO2933 [Ruegeria pomeroyi DSS-3]
MKGHCHCGAVRWQSDGKVAWSCYCHCADCRRNCAAPVTAFFGLPHESVTWSGDAPRIYRSTDRVERLFCG
TCGTQMAYRNADDRVNIHLYTATLEDPSALPPRFHVFHTARLPWLDLQDDLPRFDRTAG
>gi|56697772|ref|YP_168142.1| propionate--CoA ligase [Ruegeria pomeroyi DSS-3]
MAYQDVYESWKSDPEAFWMEAAKSIDWVEAPSRALDDSNAPLYEWFTDAKVNTCWNAVDRHVEAGRGEQT
AIIYDSPITHTKRQISYVELRNRVAMLAGALRAKGVEKGDRVIIYMPMIPEALEAMLACARLGAVHSVVF
GGFAANELAVRIDDAQPKAIIAASCGLEPGRVVHYKPLLDGAIDMAKHKPEFCVIFQREQEVAHLEEGRD
YNWHGFQYGVEPAECVPVEGNHPAYILYTSGTTGAPKGVLRPTAGHLVALNWTMKNIYNVDPGDVFWAAS
DVGWVVGHSYICYGPLIHGNTTIVFEGKPVGTPDAGTFWRVISEHKVKSFFTAPTAIRAVKREDPKGEML
AKYDLSHLKALYLAGERADPDTIIWAQKALSVPVIDHWWQTETGWTIAGNPLGIEELPTKLGSPAKAMPG
YDVQILDEGGHQMKPGELGAIAVKLPLPPGTLPGLWNAEARFRKSYLEHFPGYYETGDAGMIDEDGYLYI
MARTDDVINVAGHRLSTGGMEEVLAGHEDVAECAVIGVSDDLKGQMPLGFLCLNNGCNRDHGDVVKEVVK
LVRDKIGPVAAFKLAVVVDRLPKTRSGKILRGTMVSIADGKEYKMPATIDDPAILDEIKVALQSLGYAK
>gi|56697774|ref|YP_168143.1| hypothetical protein SPO2936 [Ruegeria pomeroyi DSS-3]
MRFPHARVPDRPGLLCRPARLARACKRGAAYSGHRRTDRHLVLLLGRHGRPRGGGRLGPSHLRPVVFGRW
HPGGAAGRGRHHLHGAQDRAGRPAGRGRYRTAPRLAHGRGRRDALPARRHQLSDRRPGDQRSGHHQPQPR
RLWPGARLRHSGAQGMKRLSLALALLASPALAQDFSAGSTAKPWNLYAEQPAFFEAKVVDLLCELTGDCP
ADCGAGKRQLGLLRSADNVMVLPLKNGQPVFSGAAADLAPYCGQTVEVDGLLIDDPDLGAKHVYQVQKIR
LPGSEWETANRFTKVWEEENPEATGKGPWFRRDPRVLDHIEDRGYLGLGLEVDEAFIKEWF
>gi|56697773|ref|YP_168144.1| hypothetical protein SPO2935 [Ruegeria pomeroyi DSS-3]
MRAFLTALACCAALPALPALASEGQRIQVTGELIDTWCYYSGVMGGPEAVVGSAHHTCALWCSAGGIPVG
LQAEDGTIYMVLKIEQDDQLAGGDTALRLASHTVEADGMHYQRDGINYLIVDQVISDLDITNLNHEDYGP
VPGFAIPEPKE
>gi|56697775|ref|YP_168145.1| SCO1/SenC family protein [Ruegeria pomeroyi DSS-3]
MRLLLRAALLVGVALAAPAQAGNAPLPFDVGGPFELTDQHGARRSQADPQGHGQLLFFGYATCPGICSAA
MPMMADAVDRLAEAGIPVTPVMITVDPERDRPGEMNAPLARYHPDFIGLTGSEAELQAAYSAYSVERELA
YVDPEYGPVYTHGAFIYLLDAKGEVLSLFPPILSSDRVVELARKYLGSEG
>gi|56697776|ref|YP_168146.1| amidase [Ruegeria pomeroyi DSS-3]
MTDTALWQLDATQIAAQTTSGALSAEQAVGAAIERMQAVNPDLNAVVDSCAEAAMDRARALDKARAAGTP
CGPLHGVPVTIKVNVDQTGYATTNGVTALKDMIAPDDAPVVRNLQAAGAVVIGRTNTPEFSFRADTDNPL
YGRTHNPWGRHISPGGSSGGAGSAVMAGIGALAHGNDIGGSLRFPAAANGAVTVKPGLGRVPAWNPSQKA
ERGMLAQSMSVQGLITRSAADLHLAMPSLIAPDPRDPFHVPLPWRGTPVEGPIRVAFTKATYGYDLHPEV
EAALDTARDALRDAGYLVEEVETPDAFEAGRAGYRALMGEVWALMKADVDAYGSQTVRDIFEVYFQEFPP
FHGTELLQVMAARSHYAREWSLFLEQYPLVLGPFLPQPFFGPDRDTEGAEGVHEALGSAVWSYAMNFIGL
PAACLPTRLADLPKGAQPINVQITARRWREDMAVDAAAAVEARVGRMAPHLWARMG
>gi|56697777|ref|YP_168147.1| inorganic polyphosphate/ATP-NAD kinase [Ruegeria pomeroyi DSS-3]
MSKRIAFLASDAPVAQTARAALVGRYGNAAPRDAEVIVALGGDGYMLRTLHSTQHLDVPVYGMNRGTIGF
LMNEYAETSLLERLAAAEEEIINPLSMTAMDQAGQIHRALAINEVSLLRAGPQAARLKISIDGRLRLAEL
VCDGALVATPAGSTAYNYSAHGPILPIGSDVLALTAIAAFRPRRWRGALLPKTAKVRFDVVDADKRPVMA
DADSTSITDIDWVEIQSEPTIRHRILFDPGHGLEERLISEQFT
>gi|56697778|ref|YP_168148.1| serine hydroxymethyltransferase [Ruegeria pomeroyi DSS-3]
MNASHQDTGFFTEALSERDPELFGAITSELGRQRDEIELIASENIVSAAVMQAQGSVMTNKYAEGYPGRR
YYGGCQYVDIAENLAIERAKQLFGCGFANVQPNSGSQANQGVFQALIKPGDTILGMSLDAGGHLTHGAAP
NQSGKWFNAVQYGVRQQDNLLDYDQVEALAKEHRPKLIIAGGSAIPRQIDFARMREIADMVGAYLHVDMA
HFAGLVAAGEHPSPFPHAHVATTTTHKTLRGPRGGMILTNDEDIAKKVNSAIFPGIQGGPLMHVIAAKAV
AFGEALRPEFKTYIQQVIANAQALSDQLIKGGLDTVTHGTDTHVVLVDLRPKGVKGNATEKALGRAHITC
NKNGVPFDPEKPTVTSGIRLGSPAGTTRGFAETEFRQIADWIIEVVDGLAANGEDANEAVEDKVKAQVAA
LCAKFPIYPNL
>gi|56697779|ref|YP_168149.1| hypothetical protein SPO2941 [Ruegeria pomeroyi DSS-3]
MRARLPHVLAEFVMFVLKQGWAALFGASLLIGLIVSDRIWQPDWALARYDALLIYALGLQVLFLALGLES
WREVRVILLFHLTGTAMEIFKVQAGSWAYPGPGLIKLWEVPLFSGFMYASVGSYMARAIRLFDMRFAPYP
PFWLSVLLAVAIYVNFFAHHFLTDVRLILFAATVALYARTRITFRIGDHRYWMPLPLAAFFSSFFLWLAE
NVGTATRTWLYTGQVAGEMVRLAKMGSWYLLLYVSFVTVTLVMRDALEEAPAKGRSRPI
>gi|56697780|ref|YP_168150.1| hypothetical protein SPO2942 [Ruegeria pomeroyi DSS-3]
MQDRVQHAALIACRARRRQPPAAPLSLSVARDMVPAGGDDAMTESDRIEDQIAATVALLRARLGVHGKSL
RLALRRAKHRLPRRIYRRAMELARVEPMMAHPRLRMTLNAPSLSAAAREVQAHLRGIDLADRRKGWWLGM
LGALVFNLLVFGALLLAFLAWRRLI
>gi|56697781|ref|YP_168151.1| alpha/beta fold family hydrolase [Ruegeria pomeroyi DSS-3]
MLNTILHGTPTDAPPLVIAHGLYGSGRNWGVIARRLADERQVIAVDMRNHGHSPWAEPHDYPALAADLAD
VIEAHGGRADLLGHSMGGKAAMVLALTHGQLLRRLVVADIAPVTYSHSQMPFIEAMRGVDLSRVERRSDA
EEMLAAQGVEKALQSFFTQSLDLPGKRWRLNLDGLAANMPAIMSFPELSGHWDGAALFLTGSTSDYVRTE
HRPLIRGLFPAARFAKIPGAGHWLHADRPREFEAAVRVFLNA
>gi|56697782|ref|YP_168152.1| hypothetical protein SPO2944 [Ruegeria pomeroyi DSS-3]
MVGRAAKTGGPAMMRLASILYSLISTALAGTAVIAVLTAGMVSLNAILVAAVAGFVVAAPVSWMVARRLY
DEEA
>gi|56697783|ref|YP_168153.1| rhodanese-like domain-containing protein [Ruegeria pomeroyi DSS-3]
MVLTVKDMMAAANAVVPRIDGARAQQLVAEGALLLDLRDAPELERAGRASGAHHIPRGMLEFRADPDTPF
HDPELRKDRVIVLHCASGGRAALAGKLLKDMGYGEVYNLGGFADWTGERIEPVDPGM
>gi|56697784|ref|YP_168154.1| monooxygenase domain-containing protein [Ruegeria pomeroyi DSS-3]
MVKRKNVAVIGGGVSGLAAAKAFDERGHRVTGFERSHDFGGVWELSRSYPDVQTQSPKDLYCYTDLPMPD
AYPEWPKGPQVHAYLHSYANKHNLPRLFQLNTNILSMDRRADGQPGWTLTIEAAGRVRKEDFDFVAICTG
QFSDKNILTHPGQEAFVAGGGEVIHSSEYTDSEMARGKHVVVLGGSKSATDIVVNAARSGAKSVTMVYRE
NVWRVPYFVGGINFKRLLYMRAQEQQFNQWGKSPLQRVIAALLKPLVWANFRGLETLLKAQLGLKKWNMV
PDTPIEKEASCSLPIVTPGLFESFRDGTVKPIQGTYDRYEDGHVVLTTGDRVPCDLSVLAVGWKLGIPYL
AQEYRDKLIEADGQYRVYRLAVNPDLPDMGFVGFNSSFCTILSAEMIANWLVRFADGQLAHQPSAQEMNA
NIEMMLNWRRKERPAAQVYGGLCSAPFHFKHFDELLADMGAGVRKRANPLAEQFSYPDARAYGRFLASTP
QYQAG
>gi|56697785|ref|YP_168155.1| cupin family protein [Ruegeria pomeroyi DSS-3]
MQMEAGITATDAGLEGLAWNVVGQVYTPKLHSDNVFMWHAEVPADTFVPPHVHPTQDEWILVLSGTLEVD
FGFETGNVTANKAGPGDVVRMPKGVAHAVFNRSGAGATCVFGVAPSRKLFDLFKALDGVTDPAELVRISA
LHEVDFLPPPDAQ
>gi|56697786|ref|YP_168156.1| AraC family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MQELLCDRGKGRHADPMQNKPDTPPLSRFHQFRTADLDEARALVARNFCGHRLERQAREDAFDACQNRAG
GNGLFYNYIRYGADVEIEPGELGSFYLIQVPIRGQALIRNGRTEVETGSAIASVLNPDRHTRMRWLAGCE
QVLLQIDRNRLTAVAETLTGTALQSPVRFDPQIDRARPEMQRWLALFRRAVSAVDHGALLDPDQALSRAL
VEDELIAGFLRAQPSSIAPLLERPETGPLSPHVRRARDFMQAHLADPLTLSQIAAAAGTSPRNLQLGFSQ
LLEMTPLAYLRVLRLNYARYLLRESPPQVTIASIAGAAGFSHLGRFSAQYAARFGEGPSQTRKQHYLI
>gi|56697787|ref|YP_168157.1| endoribonuclease L-PSP family protein [Ruegeria pomeroyi DSS-3]
MGITRIHTGERMSKIVKHNGVAYLCGQVGSGDSVAEQTRDCLARVDALLAEAGSDNTRILQAIVWLADMA
DFAEMNAVWDAWVPAGHAPARACGEAKLARDTLKVEIIVTAACD
>gi|56697788|ref|YP_168158.1| hypothetical protein SPO2950 [Ruegeria pomeroyi DSS-3]
MTKQDIRVALTIVALVLGLGWAIGYGIGLMTRPASVVPENPPHDALKSPARKAPRSGAVSGDTRYPDYEE
LYVNDYADLLDPAAEDRLRDKLIALYGHNGVEMTVLTIDTMGTYGHGGAIEPFATGLFNNWGIGDAERND
GVLVLIVRFDRKMRIEIGAGYERAWDARMQRVIDAGFLPYFRRDEYQEGIEAGVDETIRELTGAYPGAWD
MGTAQRGWSWLARAVDRIGEWVLSLLLVPLGGAALWVRRYLRNRTRPCAQCRTPMLRAGEEADDEHLDGG
QRLEEYLKSVDYDVWHCPDCGHIDIHRYKSWFSGYGACPQCNYRTLSTTSTVLSAATKTREGRKRVEYDC
AHCGHHDSEIRTIPKISDSNSGGSGRSSFGGGSSSGGGASGSW
>gi|56697789|ref|YP_168159.1| hypothetical protein SPO2951 [Ruegeria pomeroyi DSS-3]
MGWRAVAIHGVRVPFGRMSVMRAFLGIAALCVAGAVEAGTVSGSAGYRERFALPPGAVLQVELRDISRQD
VAAPLLSARRYAMTGVPMDFALDYDDALIDPAMRYAVSARILQDERLLFVTDTVVPVLTGEAGNTADLML
VRVAGEVSALEGRNWALREIEGMPVERPGMPGIAFDAGGRFSGRGGCNRFQGEAEIGAGWINFPDNIGMT
MMACSQEAEALDRRFLEALAKVVAFAVEGDALTLAGVEGRVVLRFVDQP
>gi|56697790|ref|YP_168160.1| TrkA domain-containing protein [Ruegeria pomeroyi DSS-3]
MQFLHLTDTAGALVTLAIVLTMFLLFLRESYPTEVVAILGVSAMLVTGVLPYDAALPVLANPAPWTIAAM
FIIMGALVRTGALDAFTSIAQRHAQTNARFAIGLLMAFVVIASAFVSNTPVVVVMIPVFVQIARTLNVAA
SKLLIPLSYAAILGGTLTLIGTSTNLLVDGVARAQGMAAFSIFEVTPLGIAVVAWGMIYLRFVAPRFLPE
RDSMATLLSDRSKMKFFTEAVIPPDSNLIGREVTGVQLFKRPGVRLIDVIRGDLSLRRNLKGVELQVGDR
VVLRTQMTELLSLQRNKELKRVDQVSAVETATVEVLITPGCRMVGRSLGEMRLRRRYGVYVLAVHRRNQN
IGRQLDQLVVKVGDTLLLEGAPGDIQRLAADMEMVDVSHPSVRAYRRGHAPIAVVALVGIVALAGLGVAP
ILLLSVLAVALVLGSRCIDADEAFSFVDGRLLALIFAMLAIGAALESSGAVRLIVEAIAPGLSSLPPFLV
IWAIYLLTSVLTELVSNNAVAVVVTPIAIGLAQAMGIDPRPLVVAVMIAASASFATPIGYQTNMLVYGPG
GYKFTDFMRVGIPLNLTMGVLVSALIPLIWPL
>gi|56697791|ref|YP_168161.1| Ser/Thr protein phosphatase family protein [Ruegeria pomeroyi DSS-3]
MKILFLGDVMGRAGRQAVCEHLPRLRAEWKLDFVVVNGENASNGMGLSGEHAKALLDAGADCLTLGDHAF
DQKDMLQYIETEPRIIRPINYAKGAPGRGHRLFTAPGGRKVLVAQVLGQVFMKRPYDDPFSAIEPVLKSH
PRGGLADAVIVDMHCEATSEKMAMGHYCDGRASLVVGTHTHVPTADAMVMPGGTAYLSDAGMCGDYHSVI
GMEKAEPMRRFITGMAKSRFTPALGEATVSGVYVETAPQGGAATRIAMVRVGGQLQQSGP
>gi|56697792|ref|YP_168162.1| 5-formyltetrahydrofolate cyclo-ligase family protein [Ruegeria pomeroyi DSS-3]
MDDLTAIKAAARKAAFARRKAAFDACPAGAAGRLSEVLAGYRGVPLSGYMPIRTEIDPLPAMAEAAAHGP
VGVPVIQGAGLPLRFSLWSPEGPLREGPFGAMVPETDDWMEPEILIVPLVAFDSRGGRLGYGGGFYDRTL
QGLRAKRATLAIGFAFDAQEAEALPLEPTDQPLDMVVTESRVLSF
>gi|56697793|ref|YP_168163.1| magnesium transporter [Ruegeria pomeroyi DSS-3]
MTTGTVTPDQDKPRDEDAYELDRRHVAAILYAVDTDDRDQLIELMEPLHAADIADLLEQINTFDRARLIR
LYDREFDGEILSELDEGIREEVVRLLNPDVLAEAVRELDSDDVVDLLEDLEESDHETILDALEDADRVAV
EQALAYPEGSAGRLMQREVVMAPEHWTVGEVIDFMRGSDDLPDQFYHVVLVDPRLHPVGNVTLGRIMSAR
REVPLSTLAEETFQIIPADQDEEDVAYAFNQYHLISAPVVDAEGRLVGVITIDDAMIVLDEEHEEDILRL
AGVGESSLSDTVMETTRQRLPWLAVNLATAILASLVISIFESTIANVVALAVLMPIVASMGGNAGTQSLT
VAVRALATRDLTGSNLGRVLRREVMVGLVNGAVFAVVMGIVGHVWFGLPLLGPVIAAAMVVNLVVAGLAG
AGIPVLLEKAGIDPALASGTFVTTVTDVVGFFAFLGLASVFLL
>gi|56697794|ref|YP_168164.1| guanine deaminase [Ruegeria pomeroyi DSS-3]
MTGQTILRGRVLSFVQSPFDTAPETAVRENEALLIEGGHVTAVGSWDALRREAPQAEVSDHGERVILAGF
VDAHVHYPQTAMIASWGKRLIDWLNTYTFPEERKFADLTYASEIAARYLDLTAAHGTTTMCSFCTIHPES
VEAFFAEAQARGQRVVAGKTCMDRNAPDFLRDTAQSAYDQSKALLQKWHGVDRISYAITPRFSPTSTSEQ
LDAMGALWAEHPDCLMQTHLSEQTDEIEWVKGLYPEARDYLDTYEQHGLLGGCGLYGHAIHLEKRERDRL
REHGAGLIHCPTSNTFIGSGLFDMAGLMAEGQRIGLATDTGGGSSFSMLRTMAAAYEIGQLRGVPLHAAQ
LLWLATQGSARALRMDHQIGNIAPGMEADLVVLDLASTPAIAQRSAMADDLWEALFPTIMMGDDRAIAEV
WIAGRRV
>gi|56697795|ref|YP_168165.1| hydroxydechloroatrazine ethylaminohydrolase [Ruegeria pomeroyi DSS-3]
MTEHLIRNADTILTMDAGRRELAGADILIRDGIVAAIGPNLATLGEVHEARGCVVTPGLVNTHHHLYQSL
TRAVPGGQDALLFGWLKTLYPIWARFGPEEMFVSAQTGLAELALSGCTLSSDHLYLYPNGARLDDTIAAA
TELGLRFHPTRGAMSIGESAGGLPPDTLVEGEAAILDDMIRVVDAFHDAGEGSMCRVGLAPCSPFSVSRD
LMRDAALLARDKGVMLHTHLAENDEDIAYSLAQFGCRPGQYAEDLGWTGPDVWHAHCVKLDGQEIDLFAR
SRTGVAHCPCSNCRLGSGIAPVRAMRDAGVSVGLGVDGSASNDSGNLMGEARQAMLLQRVARGADAMSAR
EALEIATRGGADVLGRPDCGRLELGKRADIAIWDVSGINSAGSWDPAALLLAGPTRVKHLFVEGRQIVRD
GQIITIDLPHMIERQNRLARALMG
>gi|56697796|ref|YP_168166.1| inositol monophosphatase family protein [Ruegeria pomeroyi DSS-3]
MKPADFTDLEIAEKLADAARAAILPYFRRLDLGAENKLDTGFDPVTEADRAAELAMRDILADLRPDDGIH
GEEFDEVEGRSGRVWVLDPIDGTRGFISGTPTWGVLIALSDMRGPFLGVVDQPYIGERFVGTPEGAYVTG
PLGRQTLATRQGTDLSDAVLFTTFPELGSTAEEAAFRAVSSRVKLTRYGMDCYAYALLAAGLVDLVIEAG
LKAVDIQAPIALIEAAGGIVTDWQGGPAHEGGRALAAANPQLHSAALDFLRGV
>gi|56697797|ref|YP_168167.1| DNA-binding protein, putative [Ruegeria pomeroyi DSS-3]
MTHPVDVHVGKRVRHRRWLIGMTQQQLAEQVGIKFQQIQKYETGANRVSASRLWDIAEALDVPVSFFFEG
LEEAEKVVAEKPSVPADLMGDKEALDLVRSYYAIPENQRRRLFELARVLSDVA
>gi|56697798|ref|YP_168168.1| zinc-binding dehydrogenase family oxidoreductase [Ruegeria pomeroyi DSS-3]
MRSFTVQSAGSPAQLIDQPVPEPAPGQVRIDIRACGLNFADLLMQKGTYQDTPPAPFTLGMEVAGTINAL
GTGVSHLKVGDRIAIYTGQGGLAEQGVFDADRALPLPDTMSFEHAAAFQIAYGTSHMALDHRARLQPGET
LLVTGAAGGVGLTAVEIGKLMGARVIAQARGADKLEIARQAGADILIDADEDLRARLLDLGGVDVVYDAI
GGDVFKAAFRAANPEARLLPIGFAGGEVPQIPANHLLVRNLTVIGFYIGGYLSFRPEVIRNSFQTLLDWY
QQGRLHPHVSHILPLERAAEGLELLRNRTATGKVVITP
>gi|56697799|ref|YP_168169.1| LysR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MIRNLDITTLRSFVAVADSGGVTRAAGFLHLTQSAVSMQIKRLEELLGLQLLDRSGRGIALTASGEQLLA
YARRMVAMNDEVIARLTDQAFEGEVVLGVPHDIVYPAIPRVLQQFNAAYPRVRVQLLSCYTSWLKEQYER
GECDVILTTEPGGGDHCETIAELPLRWIGAAGGSAWRQRPLKLALGRRCLFRASVIAALDAANIPWELSV
ETENDRTIEATVSADLAVHAMLEGTAAPHLMQIDSDTLPELPSHKINLYGGNDGKGQIVDALVDLVRQNF
AKMGGAHLRAVS
>gi|56697800|ref|YP_168170.1| hypothetical protein SPO2962 [Ruegeria pomeroyi DSS-3]
MRPRYTSRMKKGHDMSFVTVSHPCRPVRRTRLSAFYDLLALRRQRQELRHLDDRALDDMGITRAEARTEA
NRPFWDAPHHWLK
>gi|56697801|ref|YP_168171.1| hypothetical protein SPO2963 [Ruegeria pomeroyi DSS-3]
MRPEFDFRETQMAQFDTIRSAAGSRAAQIDEGLRAHMNKVYGTMSVGMLITFAAAWAISGLAVTTDPGAA
VAQLSADKYLTQIGYSLYASPLKWVIIFAPLAFVFGFSAAINRLSAAAAQLIFYTFAFVMGLSISSIFLV
FTGQSIIQVFLITAIAFAGLSLYGYTTKKDLSAMGTFLIMGLIGLIVAMVVNIFLASSAMAFAISAIGVL
IFAGLTAYDTQNIKNTYLQMAHSGDQEWLGKAAIMGALSLYLDFINLFMFLLQLLGNRE
>gi|56697802|ref|YP_168172.1| hypothetical protein SPO2964 [Ruegeria pomeroyi DSS-3]
MSLDNRTGPPHRGGLFHSGVWRRARTACFRCPGGARVARSATNPMTVMKKILLPTLALMSLSACASLWHR
EGVGFTGIDGEPKTFTTEKGSADYVARRLSVPAELAGKPVQRLQSEKGDIASLAGVAIGAGGRDPQSAVE
VGSGTLELFLSTVEVNGVLFAVLRTQEGEIDRLPENSNVAFAQSVPRLTGCLTGGQVYQAGRANRPTGLA
VPLDCR
>gi|56698715|ref|YP_168173.1| 50S ribosomal protein L33 [Ruegeria pomeroyi DSS-3]
MAKPTTIKIRLNSTAGTGHFYVTKKNARTMTEKMTVRKYDPVVRKHVEYKEGKIK
>gi|56697803|ref|YP_168174.1| N-acetylmuramoyl-L-alanine amidase, putative [Ruegeria pomeroyi DSS-3]
MAPHWHPSPNFGPRRDGLTPSLVVLHYTAMDSAKAALERLCDPEAEVSAHYLIGADGTLWQMVDEADRAW
HAGVGEWRGRDDINSRSIGIELDNRGDHPFSAPQMTTLDGLLADILRRWAIPPAGVIGHSDMAPGRKCDP
GPRFDWARLARLGLAERSGSGSCEDDPTPERLRAAAHATGFTAPADDETLLAALRLRYRPWGRGPLCAAD
LAALPLHSAQNTPG
>gi|56697804|ref|YP_168175.1| hypothetical protein SPO2968 [Ruegeria pomeroyi DSS-3]
MGRGRSAEYGLCAGTGRGLCGQALKMVVNLSAKQKSRTATMRVFYLVPVIGVLAACDPAIPDSAAGVGFN
TPEYQAQREAVLQGQTVTGDPLIPPSAVSSEGLPPLDPSTAAPTATAPLQAPTQTAAYVPQPGDTSDDIA
RETAAALAAANGNSGVAPVEASPSNPAPALVSNPGISDEQDFQAVASRESIQSDAERIAQNRASYQVVAP
TALPQRDTDGSPNVVQYALSTSHPKGTQIYSRAGFNLAAKAQRNCAAFASPDQAQIEFLSNGGPQRDRKG
LDPDGDGYACGWDPAPFRRAVQN
>gi|56697805|ref|YP_168176.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Ruegeria pomeroyi DSS-3]
MSDLNTLTLAQARDALRKGETTSVALTEACLAAIEGAGALNAFVHKTPELALERAKAADERLQGREEAPK
MCGLPIGIKDLFCTKGVPSQAASRILEGFKPEYESTVSQQLADAGAVMLGKLNMDEFAMGSSNETSCYGN
AVNPWRRGNDDAALTPGGSSGGSAAAVAADLCLAATGTDTGGSIRQPAAFVGITGIKPTYGRCSRWGIVA
FASSLDQAGPMTKDVRDAAIMLEAMCGHDPKDSTSAELAVPDFEAMLTGDIRGKVIGIPREYRMDGMPEE
IEALWQQGTEMLRAAGAEIRDISLPHTKYALPTYYVIAPAEASSNLARYDGVRYGHRAKLAQGDGITEMY
EKTRAEGFGHEVQRRVMVGTYVLSAGFYDAYYNRARKVRSLIKKDFEDVFAAGVDAILTPATPSAAFGLG
EMTDADPVQMYLNDVFTVTVNLAGLPGVSVPAGLDKQGLPLGLQLIGRPWEEGDLLNTAYALEQAAGFVA
KPSKWW
>gi|56697806|ref|YP_168177.1| aspartyl/glutamyl-tRNA amidotransferase subunit C [Ruegeria pomeroyi DSS-3]
MSIDQSTAAKVAKLARIKVEQDALPALAAEFNTILGFIEQLNEVNVDGVEPMVSVTPMRLKRRTDGVSDG
NQQAKVLSNAPDAREGFFAVPKVVE
>gi|56697807|ref|YP_168178.1| hypothetical protein SPO2971 [Ruegeria pomeroyi DSS-3]
MTVVMSDGARRAGIAGAIACTTIFALTVGLSFPLLSLVLEHQGISEAAIGINAAMTPLGIVLASPFYPRL
IERFGSWQVAIGSLLLSALLILSMGLTRSFGAFLVLRLMLGMADVGIFIVSETWINQLARPETRGRVVGI
YATALSVGFGAGPFTLALIGFQGFAPFAVGAVCCFLAIGVVLAVRAYAPDVSGETPVSPLGFLRRAPTLL
AAICVYAFWEGAMLSLFPVFGLAAGLTVAVATSALSVAFLGNTALQVPIGWLSDRTSRRQVMVLCALLTA
LGAVLLPGLPDRLPLFLGVLFVFGATAGGIYTMAMSELGDRFTGSDLVAGNAAFAIAFGVGGMLGGPITG
AAMQFMGNGGFAGGVALIFVAMAALAHLRRRRG
>gi|56697808|ref|YP_168179.1| hypothetical protein SPO2972 [Ruegeria pomeroyi DSS-3]
MSRMITFTAAALSTLLAFGPAMAADEINVVPGLTAAGAPLGLHGSDPVALLDKGKNREGSAAHTAVHDGV
AYYFASEKNLKAFQANPDHYSVQNGGFCTFGVSVGKKFDGDPNYAAVVDGKLYVFLNEEIYKMFEKDKAG
TISKAAANWTKIEHTAAKDL
>gi|56697809|ref|YP_168180.1| hypothetical protein SPO2974 [Ruegeria pomeroyi DSS-3]
MGDLTADVLVIGGGTAGFGAAVAAGRLGLDVVLLEAGTKVGGVMAFCPGMPWGAAYPQDESIGGLMQELT
DRLMGMDPPMAEKRPCTLENFGPEIQYDHDAATTMMFEMLEEAGVRVFLGAVAFAPVMEGNRIAAVEFFD
RRCPQRIAAKIVIDCSGDGDISAKAGVPFTLGDGQGNMMAVTLSFFMEGADWDRVFAENDPYFRRYAAKG
IAEGRLHPHLAQLYLMKGFHPGTVFCNSVAIRGVDGTDPADVTRATQEGRRRCLQLAQFLRADVPGFEAA
HMSQLGPTVGVRETRKLEGMYKVTGADLAAGTKFADGIVACDNPIDDVMRTSDQMTHDAMVERGGYYTIP
FRSLLPKAVANLMFAGRILSADLVAFASVRGMPQCMAMGQATGTAAHLAIRDGAPVQQVDRAELVKLLSE
QGVSRLLS
>gi|56697810|ref|YP_168181.1| hypothetical protein SPO2975 [Ruegeria pomeroyi DSS-3]
MDWLREIDGYCERLGPGYWAEPVNAVTNLAFVLAAAVMWRRTRGLRDRTETALIAVLALIGLGSFLFHTH
AQVWAAIADVLPIAAFVLIYIHAINRAGWRLRPLPALLLTGGFFPYAAATVPLFGLVPELGGSAAYAPIP
LLILIYAALLNRRAPALARGLALGAGILIVSITFRALDSPLCNSWPIGTHFLWHLLNALMLGWMIEVYHR
HRSGL
>gi|56697811|ref|YP_168182.1| metallo-beta-lactamase family protein [Ruegeria pomeroyi DSS-3]
MKIIWLGHGSFRIESGEAVLLVDPWLNGNPTLPEDQHDAAVIGATHILLTHTHFDHVVDVLPLARLLKVP
VVGQYDLMGYWSEAEEIETVGFNKGGTVTLNGVRVSMVPASHSSTFTTPDGLRSGGSEVGYMIAAEGHVV
YLSGDTGIMADMDWMGDYYKPDIGILSAGGHFTMDMQGAAYAAKRYFNFKTVIPCHYRSFPILEQSAQAL
IDGLPGVEVIEPQVMQAIEV
>gi|56697812|ref|YP_168183.1| adenylate/guanylate cyclase [Ruegeria pomeroyi DSS-3]
MGETWMSAVTPSPELLAFARRWIDAIPNRRPNDLRNMMTEKEHLLFVGTGEDEIWAGSSVREGIGDFFGE
IPEFLRHEEVFAEAYEHNGTGWACLCHEIVFARQPDRVFQVRSTLIFTLEDGAWKIVHRHGSVPIPNMDF
TGAAQTAIADLVAAAKQGFSLDQREGFASVMFTDIVNSSRLASAMGDRLWSSEVARHFNSLREIIEARGG
QFVKSLGDGTMSSFPSPEQGLRAAQAILRATEASDGPAIALRIGIHTGEVIQTREDFFGTVVNKAARIAA
VAAPGEIVISGDTRDLAGAVEGLIIHPPADISLKGFDGLHRVHRLEWKA
>gi|56697813|ref|YP_168184.1| adenylate/guanylate cyclase [Ruegeria pomeroyi DSS-3]
MIQRSPEIEAIVRRWTTLIRSHKVADLPHYLSQSDALVYIGTADGELWRGQLVRDGIADHLAEVPDFIEE
DIEIEAYEHGETGWATYQSHYTFPGTGSQGTHRVTFVFVLERGSWKMVQHHISQADSNRDKLGIEHTAFQ
RLIAAAEAGSHSFATGGLATIMFTDIVDSSAQAAAMGDTDWVRLLDAHFRRIETIVTDHGGTLVKSLGDG
TMSSFQSATGALRAARAIRAATGSPDAALALRIGLHTGEVVENRGDFFGTVVNKAARIAAAAGPGEILIS
EALHLIAGGAPGDALAEPVSLFLKGFEGEHAVFRLAVDE
>gi|56697814|ref|YP_168185.1| hypothetical protein SPO2979 [Ruegeria pomeroyi DSS-3]
MSWLSRHAASIEALAAMATAALALAALIGIKIQLDEADRLQRQQSAREAFRAHLALAATLPEFAAPADEC
ALLHSNRGGAYAAFVDHLLYSAEQMLSVSEGWETSFLALFEPHRTYLCSEDAQGGETEETAALMARFRAS
ACAEVPACH
>gi|56697815|ref|YP_168186.1| porphyromonas-type peptidyl-arginine deiminase [Ruegeria pomeroyi DSS-3]
MAGQASAGEAGFHVPPEEARHDRTFMQWPVNRRVHPDPVFLDMAQQTIADIANAIAEFEPVTLLAAAEDH
ARARRKLSDKVTLWDIPTEDLWCRDAGPLFARDGRGGLAVSHIQFNGWGRKQVHRRDARVAEQVAQRLGL
PLLPAGLRGEAGGVEQDGHGLLMAHESSWVNDNRNPGLSRAEIEARLLRAYGAQRMIWSPGVWGEDITDY
HIDSLARFTGPGRVLINLPDDPDMDDPFHLAALDTHDALVAAGLMVEVIPEPHRRRVKSVDFVASYANYY
VCNGAVIAAQFGDAETDRIAARALARHYPGREIVTLNVDPLGEMGGGIHCATQQMPAT
>gi|56697816|ref|YP_168187.1| hypothetical protein SPO2981 [Ruegeria pomeroyi DSS-3]
MIVVQVFLDAVAIRFYRGIGAELQSIGPFSAINFFVGANNAGKSIVLNFIHDRLPFCEGKSQRLEPNSPE
VHRGSGEEGEFVAAVGVPKERFLEAVWERFPQAQMHVHEFKGKVSAIFDELSVGECVWFRSGPQIGDREY
HPQPDIEALSKLFPDREWNALWRSVQSSSGGGLINHWIPQSLDILNRCSVLSFPTTQKIEAKRGIGRADE
AFNGRGDGLIFELARLQEPGFNEDEKRDLFEQINAFLQEATGKPGARIRIPHDQSQVLVEMDGKVLPLDS
LGTGIHEVVLIASFCTIHQDQIICMEEPEIHLHPLLQRKLVEYLRDHTDNQYFIATHSGAFIDTPGAAIF
HVENDGQQTLVRPALVRQDKWRLLDDLGLHASDLLQANMVIWVEGPSDRIYLNHWIAAVDPDLREGIHYS
ILFYGGGLVSHLAAGAEEDGIQDLIDLRRMNRNMAIVMDSDRAGPRARLKGTPERIKRELTDDWGMVWVT
RGREIENYVDHAALQAALKTLHPRIYDRPAEGGAFDHAFYFLRRDGEVHQAANKVGAARLVCEGAAKLDI
LDLQDRLSELSGRIRMANGLPARATG
>gi|56697817|ref|YP_168188.1| hypothetical protein SPO2982 [Ruegeria pomeroyi DSS-3]
MEFRFREGEEVVDLPDGTDAGVYFIGRIRTPWSDRKDCPRQGREDGPKCRIELDARWASALHGVADYTWL
DVLYWLDKGRRDLVIQNPKSDGKLFGTFALRSPQRPNPIGLSRVRLERVEGTTLVVRGLDCLDGTPLIDI
KPNRCEFTPKAPPKPGV
>gi|56697818|ref|YP_168189.1| cytidine and deoxycytidylate deaminase family protein [Ruegeria pomeroyi DSS-3]
MVFRSHMDQALAEARAAGARGEVPVGAVIVAPDGRVVAAAGNRTRETCDPTAHAEIVALRAACAAAGSER
LVGHDLYVTLEPCAMCAAALAAARIRRVYYGAADPKSGGVAHGARVFSHPQAHHAPEVYDGIGGEAAAEL
LRGFFAERRDTGNRNGGES
>gi|56697819|ref|YP_168190.1| RNA pseudouridylate synthase family protein [Ruegeria pomeroyi DSS-3]
MSNTPPPGERIAKILSRAGVASRREAERMIEAGRVAVNGKVIDSPALNVTERDRVTVDGAPLADAEPARL
WLYHKPSGLVTTARDEKGRKTIFDDLPEDMPRVMSVGRLDLNSEGLLLLTNDGAVKRQLELPSTGWLRRY
RVRIKGTPKDEDFAPLRQGLVIEGERFQPMIVSIDRQQGANAWLTVGLREGKNREIRRAIEDIGFIVNRL
IRISYGPFQLGTLAPGKVEEVRRRVLRDQLGLDGEDQPTDERPARPERKRKPGASAPATPRGGTTAKARP
GGAAAGRSDAASKPRSGAPAKSRSGDPAKQRSGAPPRTRSGDPVKARTDGPARARADGPGKPRGSGPRAG
GPAKPGTGRRNAAPGERPAAKPGDKPSRRPGGGKPRS
>gi|56697820|ref|YP_168191.1| hypothetical protein SPO2985 [Ruegeria pomeroyi DSS-3]
MARRYGGKFSPETEQQSEPAPRGQFDGARVDPAGARANAMFVPAIPLVFTSLNDGAIGLVLGLGAAGLWT
GAALLLREGLRAEAAYHARRVARRPAIPRKLFATALTGLGTALAVYKSGMMAGDASILAGILFGIAASAL
HLLAFGADPMRDKGMEGVDTFQQDRVARAVGEAENMLGEMSDAIRRAGDRQLDARVERFQTTARELFRTV
EEDPRDLTGARKYLTVYLRGARDATVKFADIHARTRDGGARADYLALLDDLEQNFAARTRKMLLDDRSDL
TVEIDVLRDRLQREGVRLD
>gi|56697821|ref|YP_168192.1| tellurite resistance protein [Ruegeria pomeroyi DSS-3]
MSDSIQKKAAEAVGLVEEVTAVILPEPRAEVVPLAEADAPASAEIRRRMGEIDMGDTNSIVRFGSGAQAE
LQEISQAMLADVRNKDVGPAGDSLRNIVTTIRGFSVSELDVRRERSWWERLLGRAAPFAKFTARFEQVQG
QIDKITDTLLGHEHTLLKDIKSLDLLYEKTLRFYDELALYIAAGEEKLTELDSQDIPALAAAVDAAPEGE
QVIKAQELRDLRAARDDLERRVHDLKLTRQVTMQSLPSIRLVQENDKSLVTKINSTLVNTVPLWETQLAQ
AVTIQRSAEAAAAVRDANDLTNELLTSNAANLRESNKLIRQEMERGVFDIEAVKKANADLIGTIQESLQI
ADEGKAKRAAAEEELKKMEAELRDTLAAARARADGIGYNAGTAVPG
>gi|56697822|ref|YP_168193.1| putative lipoprotein [Ruegeria pomeroyi DSS-3]
MRTGRRIATACAAAFAALALLAGCDMPPKSSPVPPSRPAGLAPAGDQVTPRSAASADLARYYAAVQNDLL
TRGLLRTDGGGPDTPYDAEDLERNFINIAFYNEYDSGAGLPTGGRSQGFLSRWPGSVRVGVEFGPSVPLE
QRAKDKGAVENYADRLGRLTGHQISAVSRGANFHVFVAGLDDGPFVQERLRRLVPGIRAEQLDLFVNLPR
DIYCFVFAAADPDRPYGYMRAVALIRAEHPDLVRLSCVHEEMAQGLGLANDSPAARPSIFNDDDEFALLT
DQDEKLLSMLYDPRLTPGTSAEEARPVIRIIAREKLGLSL
>gi|56697823|ref|YP_168194.1| hypothetical protein SPO2988 [Ruegeria pomeroyi DSS-3]
MGIFDFLSGQFIDVIHWTDDTRDTMVWRFEREGHEIKYGAKLTVREGQSAVFVHEGQLADVFTPGLYMLE
TNNMPILTTLNHWDHGFRSPFKSEIYFVNTTRFNNLKWGTKNPIMLRDPEFGPTRIRAFGTYSVRVTDPA
RFLSEIVGTDGEFTMDEISFQIRNIIVQEFSRVIAASGIPVLDMAANTADLGKLIAAQVALPLTEYGLEM
PEFYIENISLPPAVEAALDKRTSMGLAGDLGKFTQYSAAEAMTAAATNPAGGGMAAGLGAGMGMAMAQQM
AQPGPWGAAPASRHAAPPPPPVEHVWHVAVDGQTSGPFSKAKMGRMAAEGEITRDTYVWTPGQDGWKRAE
DVRELAQLFTILPPPPPPPGA
>gi|56697824|ref|YP_168195.1| cytochrome b562 [Ruegeria pomeroyi DSS-3]
MPARPAYSRLQIALHWLVAILIAAAWLTHEGMGRALETRIETGASGFEGNTPHVWLGIAVFVAVLIRIVV
RRVQGAPGPLPGATPLMEKAATWGHRLLYLLMVLTPALGALAWNAHSEAVGELHETVGSALMLVALGHAL
VALWHQYVKKDGSLTRITRPQG
>gi|56697825|ref|YP_168196.1| hypothetical protein SPO2990 [Ruegeria pomeroyi DSS-3]
MTDLPPPPPGAAPAPVQEHRFPCAQCGADYRFNPGAGTLVCDHCGHTEPMRADPWTGASLRELDFEAAMA
QDLPEAEIEETRVLSCPNCAAQVEFDPDTHAAECPFCATPVVTDTGIHRHIKPRGVLPFALDERSAHKAM
TDWLGRLWFAPNGLKDYARKGRRMQGIYVPYWTFDADTKSSYRGERGTIYYETRTVVRDGKTVTEQVPKI
RWSPKSGRVARFFDDVLVLASRSLPKSHTDALEPWDLAALEPYRPEYLAGFRAEGYTVELAEAHGEARAH
MARVIERDVRFDIGGDQQRIHAIDTKVSDVTFKHILLPVWLAAYKYRGTTYRFVVNGRTGRVQGERPWSA
IKITIAVVLGLLIAAGVGYVMALNQ
>gi|56697826|ref|YP_168197.1| nitroreductase family protein [Ruegeria pomeroyi DSS-3]
MCRQEETCPMSLNQLEALLGARHSCRAFRPDPVPRADIERIIAAACRVPSWCNAQPWQVTLTSGAETDAF
RTALMAEAMTGKPGPDLAFPTGYSGVYQERRRTCGWALYEAVGVEKGDRAGSAAQMMKNFSLFDAPHCAI
ISSPAELGGYGAMDCGGFVAAFTLAAQALGVATIPQAAVASYAPFLHRYFDIPKDRLILCAISFGYADTD
HPANGFRTERAALDDIVDWRG
>gi|56697827|ref|YP_168198.1| D-tyrosyl-tRNA(Tyr) deacylase [Ruegeria pomeroyi DSS-3]
MRALIQRVSHASVTVDGVVVGQTGPGLLVLVCAMAGDGEAQADQLAAKIARLRIFKDEAGKMNRSVLDIG
GAALVVSQFTLAADTRSGNRPGFSSAAPPAEGERIYEYFAAQLAAQGVPVETGRFGADMKVELLNDGPVT
IWMDI
>gi|56697828|ref|YP_168199.1| MOFRL family protein [Ruegeria pomeroyi DSS-3]
MTTAHDQALAIWQAGVDAVGGHAATGAALGNLPRPDRILAVGKAAASMARAALDHFGPLPCLVVTKDGHG
AELPASVQLIEAAHPVPDARSLVGGRALRQAVEAMPEGSHLLLLVSGGASSLAEDLVTGKTLDDLAALNR
AMLAEGLDITAMNARRRQISRIKGGGLLAGFKGARADVLAISDVPGDDLMVIGSGIGALPAAPAFAASAC
IIASNSVARAAACDHARALELPVLGNEEALHDDLAALAPRIGARLRAMPQGVLVLGGEPTVILPPNPGRG
GRNQALALALAREIAGDPGLVVVVGGTDGTDGPTDAAGAIVSGRTWGEGAAQALAAADSGSWLERAGALL
VTGPTGTNVMDLLVALRT
>gi|56697829|ref|YP_168200.1| X-Pro dipeptidyl-peptidase family protein [Ruegeria pomeroyi DSS-3]
MRMTQKNTLREIEELEDLGITLSDGTRLSARVWRPLDAGTDPVPAILEYLPYRKRDGTCARDALSHPWMA
KRGYACIRVDIRGNGDSQGLMEDEYTQQELDDAVEVIHWLAAQPWCSGTIGMMGISWGGFNSLQVAAMQP
EPLKSIITLCSTVDRYADDIHFKGGCLLNENLGWGATMWCFSSRAPDPALVGDAWREMWLERLRAQPFLP
ETWLQHQTRDAFWQHGSICEDFSAVKTPTLAISGWGDSYMNTVPHLVENLDTVVKGINGPWIHKYPHFAI
PGPRIGFLQEALRWWDRWLKGVENGAEDDPDYRAYLMDGIAPETKSLFRPGRWVAEAEGATAHLPVTTLS
LSDAGLGSDGPLSARVCSPLHVGMDCGEYGSFWAGPELPGDQRLDDALSVCFDSAPLPQRTDIVGAPRLR
LRLRADKPQAQIAVRLNHVLPDGTSARITWGVLNLSHRDSHATPEALEPGRLYDIALDLDHIAYRVPAGH
RLRVAISSSYWPMIWPAPERATLTLDSGALDLPLRPSGEADEWVFPPEDADPPWQIRTLREGTNTRRTEI
DKATGHVRLIIVDDAGLVEDMAHGARSGTIAREEWVIHPDDPTSARGSCHWTAETGRGDLSLRTETRCEM
WSDAEHFHLKAAIEAYENDTKIYENVKTSRIRRNML
>gi|56697830|ref|YP_168201.1| peptide/nickel/opine uptake ABC transporter periplasmic substrate-binding protein [Ruegeria pomeroyi DSS-3]
MPEGAKYANLDSSVNKNRAAKPRKHSTGENSMNEQLEHMAGRVTAGKMTRREFMGKAAALGVSAAVASSI
FAQAAQAAGPKKGGVVKIGSVGGESTNSLDPATYASQVPYHNGRQFGDTLVEVASDGSIEHRLAESVEAS
ADAKTWTFKLRQGVEFHNGKTMTSEDVLKTMQRHSNEDSKSGALGIMKGIESMKADGEYFSVTLTDANAD
LPYLMADYHLIIQPDGGMDNPGAGIGTGPYQVEVNEPGVRHAYKKFANYWGDDAHFDGVEVLVINDATAR
TAALQSGQVHMINRVEPKVASLLDRAPNLTVQSTPGRGHYVFIMHVDKAPFDNKDLRLALKYAINREEMV
EKILRGYGSVGNDMPINAAYPLFDSAIPQREFDLAKAAEHYKASGHDGSPIILRTADGAFPGAVDAAALF
QQTAAQAGIPLEIKREPNDGYWSEVWNVQPFCASYWGGRPVQDQMYSTAYLSTADWNDTKFKNADFDAML
MAARSELDPAKRKEIYSKMGMLLRDEGGLICPMFNDFVDAVSNTLSGWETDPNGELMNGQVTRKLWFS
>gi|56697831|ref|YP_168202.1| peptide/nickel/opine uptake ABC transporter permease [Ruegeria pomeroyi DSS-3]
MHPVVKLVSQRLALGLMLLFGASALIFGLTEALPGDAAQAVLGQSATPESLANLREEMGLDRPALTRYFE
WLGGILQGDLGKSLTNKLDIAESVGSRLGNTLFLAFWAAIVSVPMAIFLGLLAVRYRNRWPDKVISAVTL
TTISIPEFLIGYVLVYFVAVKLGMFSPLAMINESMSLGQKLNAIALPVIVLTMVVLAHMMRMTRAAILNV
MQSAYIETAELKGLTNFKIIYRHAFPNAIAPIVNVVMLNLAYLVVGVVVVEVVFVYPGMGQYLVDHVTKR
DVPVVLACGVIFAAIYIGLNMVADIVAILANPRLRHPK
>gi|56697832|ref|YP_168203.1| peptide/nickel/opine uptake ABC transporter permease [Ruegeria pomeroyi DSS-3]
MKNIPISAAIGLVLTALYFIGAIFAPLLAPYGMAEVVGDVWEPSSSEYLLGTDNIGRDLLSRMIYGGRTT
IFVATMATILSFTTGSILGFLAAVLGGWADQVMSRTVDLIMSIPSLITALVVLAMVPVTIPVLILVMGFL
DATRVYRLARAVAVDINVMDYVEAAKLRGEGRAWVIFREILPNALSPLVAELGLRFIFMVLFISTLSFLG
LGVQPPLADWGGIVKENKDGIVYGIGAALYPAVAIATLAISVNLVADWVLNRTTSLKGGRG
>gi|56697833|ref|YP_168204.1| peptide/nickel/opine uptake ABC transporter ATP-binding protein [Ruegeria pomeroyi DSS-3]
MSEPLLKVRGLKIGATVYPPGEKPHDIEIVHGVDFDLERGKVLGLIGESGAGKSTIGLASMAYGRGGVKI
TGGEVWVNGRDILKTSLKDIRGLRGGEVTYVSQSAAASFNPAKKIMEQVIEAAVEQKKFSKPEAEARARA
LFAKLGLPDPDNIGERYPHQVSGGQLQRCMTALALCPEPDLVVFDEPTTALDVTTQIDVLMAIKEAIRDT
GVGALYITHDLAVVAQVSDDIMVLRMGDMVEYGETDQIINRPQEEYTQALVSVRSIEHEEKKPTPDPVLS
VKGISARYRGLAFDVLHDVTVDLHPGQTLAVVGESGSGKSTLARVITGLLPPREGEINFAGRKLSRDLAG
RSREDLRELQMIYQMADTAMNPRQTVGTIIGRPLEFYFGLRGAEKRKRIIELLDEIEMGEKFIDRYPAEL
SGGQKQRVCIARSLAAKPRMIICDEVTSALDPLVADGILKLLLDLQKIEDVAYLFITHDLATVRAISDSI
AVMYQGRVVRYGPKSQVLSPPFDDYTDLLLSSVPEMRLGWLEEVVAHRKMESAGN
>gi|56697834|ref|YP_168205.1| hypothetical protein SPO2999 [Ruegeria pomeroyi DSS-3]
MFRHLAMASAVCFSTILSAGSGQAQTWDGRYDIVPGAVSTDAGYAARMFDRQDDVTNKTVLALRARQSGA
LQDYRLYLGGRFLGSVIHESTNTTGKFPILSRLPPTHTLGTSDTYGVVNEASLNATLTLPWVTAFVQGEY
TEVEYPGQDATQLRKYWIALGDLNQSPFYLAIGRKTVNFGNFASYAPFTHTHSSHYFWAQSDDPLIELGY
VTERTELALSLLPAHRGLRVVSSPKNNGDYENFAFNASHRFDLRGDMMLKLGAGYLRGTIYDSTIAHHPP
GTGINRSWNGAYNVNATLSGSNFDLMAEFTQTEEVWPATGHSVNATTVQGRYRASVLGKPVTYSLAASRG
IQGAKGTAWRKMDQVVLGMEMALNPHLTIGAEYMFNDGFVPLIMPTVTAVNGVRSHTVIGGIKLTF
>gi|56697835|ref|YP_168206.1| hypothetical protein SPO3000 [Ruegeria pomeroyi DSS-3]
MTSMYRFGSRPESAGSTPKDSVGYRRNAERESLMDRKLLLIILDGVPYRNFRRLFGNLEGWVQSGEARVW
KLRAVLPSISASCYASIHTGVTPQEHGCTGNGNVFRLSHKDIFSQVRAGGGVTGAVTHSFWSQFFNRHPF
DYVRDVEYDEPESDTINHGRFHTMTGYGHDNQMTPSDVDLFATLTNLCLRFGLSYGILHTCTLDSMGHRF
FHDCTEMDHACFVMDEMLAPFIPRWRQLGYDVIVTADHGQDERGHHGGRHPLQQETALYYFGDAEGPDPE
TVIDQLQLAPTILDRLGAPIAETMKAGSFLT
>gi|56697836|ref|YP_168207.1| hypothetical protein SPO3001 [Ruegeria pomeroyi DSS-3]
MRRLLLALLLALPLPALADDGCHDLWFTRNLIMDRAGYCFGSTLGQAAFDNRGCIGKSVSLGAAEQRLVA
HIRALEQSHGCRVNTGQTWLDLDDVFWRRQLWVLPVRDEFESACLGWLGPVIALRAGPGHGTAQIGQILP
GDTVGYAHIPVDGWTYVTAHAPDWQVKSGGWLDLSIPEQCRDFAG
>gi|56697837|ref|YP_168208.1| lipase, putative [Ruegeria pomeroyi DSS-3]
MAYDRLIDAETWAFIRRTSESYPEDATGLSIAAQRQVYDAMCRAFHAGRPKGVQAVDRDANGVPVRLYWA
GQPTRTVVYAHGGGFVLGGLDSHDDVCAEICASTGYRVVAVDYRLCPEHHHPVQLDDCLTAVGWAETEFG
DPIVLAGDSAGGNLMAAVTHRLRGQRREIWGQVLIYPLLSARPEAPSYREHAEAPMLSTADVAFYQSVRF
DGPVPAGDSTWAPLSDSDFSGLPPTVAVTADCDPLRDDGRDYCAAIAAAGGRAAWINEEGLVHGYLRARS
SVTRAADSFERITLAIEALGQGLWPYD
>gi|56697838|ref|YP_168209.1| AMP-binding domain protein [Ruegeria pomeroyi DSS-3]
MARVTGLWGGLLMPFAGLEDRARVENEMPWEARDVPATLHQLLTRTATRFPGHKAMSYQLLSGPTDKAET
LTWSQLLSKVNQTANLFRSLGIGENDVVAYVLPNTSETLITMLAGAVAGIVNPINPLLEPEQIAAILRET
NAKVVVTLKPFPKTDIAQKVAEAVRHAPHVNTVLEVDLNRYLTPPKSWIVPLVRPKMADKEHLAHADYLS
FNREMRKQPTELTFADSTGDRVACYFHTGGTTGMPKVAQHKYSGMIYNGWLGHTLLFNEEDTIMCPLPLF
HVFACHVIVMAAVSSGAHVVFPTPAGYRGDGVFDNFWKLIERWKVTFIITVPTAISAKMQRPVDADISSV
KTAFSGSAPLPVELFRRFEKATGVTIVEGYGLTEATCLVSCNPVDGEKKIGSIGIPFPYSDVKIIKGTPD
GPVECAVDEIGEICISNPGVYAGNTYTEEDKNKDLYYYGTHLRTGDLGRFDADGYLWITGRAKDLIIRGG
HNIDPAEIEEALLGHPAVAFAGAIGQPDAHAGEVPCAFVELVEGGKVTEAELLEHCKVHVHERAAHPKHM
TILPELPKTAVGKVFKPDLRKNAITRVYNGALTEAGLAARVVSVIDDKKRGLVAQLAAHGATEDEVAKVL
GAYTRPWEWAE
>gi|56697839|ref|YP_168210.1| LysM domain/BON superfamily protein [Ruegeria pomeroyi DSS-3]
MGLWSFVKDSGKKLFGGGEEEPQVEALQKEIADLGLDASGVEISVEGDTVRLEGAAASDELKEKIILAVG
NVEGVGAVDDQTTGGGGEPVFHTVAKGDTLWAIAEKTLGKGSRYAEIFEANRPMLSHPDKIYPGQMLRIP
QD
>gi|56697840|ref|YP_168211.1| ABC transporter, ATP binding/permease protein [Ruegeria pomeroyi DSS-3]
MRHLDLFEGSVRADCLTLMDRAAMKLDLARVAGRIRTQGRISQPMARRPTSPVASEERAGSKKVGVLSAL
WPFMMPYKALMAGALMALVLTASMSLALPLAVRRVVDNFRIENGDLLDVYFLAALGIAAVLALGTGIRYA
LVTRLGERVVADIRKAVFDRVIGMSPEFYERIMTGEVLSRITTDTTLIQSVLGSSASIALRNMLLFAGGL
VLMLLTSAKLTGLVLLLVPAVLVPILVLGRRLRAISRENQDWIAASSGNASEALSAVQTVQSYTNETASR
AAFAEVTETAYDVSRRRIATRAVLTVIVIFLVFSGIVGVLWMGANDVRAGVMTEGTLIQFVIYSVIMAGA
VAALSEIWSELQRAAGATERLVELLNAADSVNDPVQPAALALPVQGEIAFDNVTFRYPARPDQVALDGMS
LTVRPGETVAFVGPSGAGKTTVIQLIQRFYDPQSGRVLLDGQDLTTLSRADFRRHIALVPQDPVIFAASA
RENIRFGRPSASDAEVEEAARAAAAHEFIAALPEGYDSFVGERGVMLSGGQKQRIAIARAILRDAPVLLL
DEATSALDAESERAVQQAVERLSADRTTLIVAHRLATVKKADRIVVLEAGRIVAQGTHDELVAGGGLYAR
LARLQFTDGLAAE
>gi|56697841|ref|YP_168212.1| TPR domain-containing protein [Ruegeria pomeroyi DSS-3]
MRQHWRMRHLALACFLLAPGAALASDCPTAPDHSERIAHLIEDIRAAPNEMQARTISNRMWEIWADAPDE
AAQAILDNGMSRRRAWDLLGALSEFDRLVAYCPDYAEGYNQRAFANFLRQDFAAALIDLDRALALSPNHV
AAMSGRALTLMGLGRIDEARSVLNQALELNPWLPERGLVAPGGPLEPKGKDI
>gi|56697842|ref|YP_168213.1| proline dehydrogenase transcriptional activator [Ruegeria pomeroyi DSS-3]
MQMDLPDLDRYDRAILNQLAGDGRISVADLARRIGLSKTPTQARLKRLEATGIITGYRALVDPIRLGLDH
VAFVEVRLSDTREKALAEFNAAVRRIGEVEQAHMIASNFDYLLKVRTRSMTEYRAVLAERISSLPHVSST
STFVAMEAVKEPGMLGALESVT
>gi|56697843|ref|YP_168214.1| bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase [Ruegeria pomeroyi DSS-3]
MTHALRTHIDSQTYADQSALLDQLVAQAALSEVDRAAICAAAAGLVRDIRSSTAPGLMEVFLAEYGLSTD
EGIALMCLAEALLRVPDADTIDALIEDKIAPSDWGKHLGHSSSSLVNASTWALMLTGKVLDERKASPVGA
LRGAIKRLGEPVIRTAVSRAMKEMGRQFVLGETIQSAMKRASGMEAKGYTYSYDMLGEAARTEADAARYH
LSYSRAIAAIAEACTHGDIRANPGISVKLSALHPRYELAQDARVMDELVPRLRALALLAKAAGMGLNVDA
EEADRLSLSLQVIEAVMAEPALKGWDGFGIVVQAYGPRAGLVIDTLYEMAQRHDRKLMVRLVKGAYWDTE
VKRAQVEGVDGFPVFTQKSATDVSYIANARKLLSMTDRIYPQFATHNAHTVAAILHMAKDGQPYEFQRLH
GMGETLHNLVLTANKTRCRIYAPVGAHRDLLAYLVRRLLENGANSSFVNQIVDENVPPEVVAADPFETVK
APAKPLKRGPELFAPERPNSMGFDLGHQPTLDAIDAARDPFRSHRWQAGPLLAEEASPEAEEAVVNPADP
HDVPGSVAPASAADAELSLARAQPWQAPAAERAAVLNRAADLYEAHYGELFALLHREAGKTLPDAVAELR
EAVDFLRYYAANIPDAASAGIFTCISPWNFPLAIFSGQIAAALATGNAVLAKPAPQTPLIAHRAVQLLHE
AGVPRDALQLLPGGPAVGAALTSDPRVSGVAFTGSTATAQKIRAAMAANMRPGTPLIAETGGLNAMIVDS
TALPEQAVQAVIESAFQSAGQRCSALRCLYLQEDIAEDVLTMLKGAMDALNLGNPWALSTDSGPVIDEAA
RKIITDHVAGARAEGRVLKELALPPEGTFVAPTLIKVAGIGALEREIFGPVLHVATFRSNELDQVIAAIN
ATGYGLTFGLQTRIDDRVQHVTEAVHAGNIYVNRNQIGAIVGSQPFGGEGLSGTGPKAGGPNYMARFCAP
DRQQAAADWAAPMATLPRATGTPAPVRVQSLPGPTGESNRLSEMARPPLLCLGPTAATVATQAQAVEALG
GTAIRATGALAAEALETVEGISGVIWWGDEETARAYELALSRRSGPILPLIPGLPDGARVLAERHVCVDT
TAAGGNAALLGGMG
>gi|56697844|ref|YP_168215.1| rhomboid family protein [Ruegeria pomeroyi DSS-3]
MFPIRDHNPSGRTPYVVYLLLAANIAIFLATLGIMDDPRLIGRFYYDYAIIPARISDGDGWQTLVTSIFL
HGGWMHLGGNMLFLWIFGDNLEDEMGHLGFALFYLAAGIGAGLIHVLSGPGSMVPTIGASGAIAGVMGGY
LLLFPRARVDILLILFVYFRIFTIPAFVMLGAWLGFQFLGGFSSDPDTGGVAYWAHTGGFAVGLVLTLPL
WLKRGGRGFWQCTDGHPPHPEQKYRLSPSRIPKIPRS
>gi|56697845|ref|YP_168216.1| inositol-1-monophosphatase, putative [Ruegeria pomeroyi DSS-3]
MIGSANLNIMIKAARKAGRSLVKDFREVENLQVSMKGAGDFVSKADIAAEAILKEELRNARPTYGWIAEE
GGVEEGEDPTRRWIVDPLDGTTNFLHGLPHWAISIALEHKGKVVAGVIYDAAKDEMFFAEKGEGAWMNDQ
RIRVSGRHRMIEAVFATGLPFGGRADLPLTLQDLARLMPVCAGVRRWGSAALDMAYVAAGRYEGFWERRL
NAWDVAAGIIIVKEAGGLIEALDPEDSILDSGEVICANGNIFDPFAKVIRG
>gi|56697846|ref|YP_168217.1| L4BD family NADP-dependent oxidoreductase [Ruegeria pomeroyi DSS-3]
MTDRMYRIALASRPTGAPEAANFSLEEAPVPTPGPGEVLVRVHYMSLDPYMRGRMDDAKSYAAPVPIGGT
MEAGGVGEVIASNDPGFAPGDFAFGMFGWATHGVQPGKMLRKIDPKVMPITTALGVLGMPGFTGWFGLME
HGRPKAGETLVVAAATGPVGSMVGQVARLAGLRTVGVAGGADKCRIATETFGFDACLDHRAYDSAADLRR
ALAAECPDGIDIYFENVGGKVLEAVLPLMNNFGRIPVCGMISWYNAGGLGAGASDPGLTGPAIWRSILVK
FLSVNGFIISNHFDRYPAFLAEIAPKLASGEIRYLEDVAEGLENAPAAFMAMLRGGNTGKQIVKLI
>gi|56697847|ref|YP_168218.1| hypothetical protein SPO3014 [Ruegeria pomeroyi DSS-3]
MTTYHEFSQEDIQHIIDAGQAHHDSVNLKAMGPSDAMLHASPLVLGETCISVTVENHSVCLNLPIIDKKI
CFPIPVSVPNGTAAKACLKICTTIGIPTGVCVTISALGMQIVHQCFGKC
>gi|56697848|ref|YP_168219.1| transcriptional regulator MetR [Ruegeria pomeroyi DSS-3]
MHIEFRHLRTIKAIHDCGGLARAADQLNITQSALSHQIKGLEDQAGVELFVRRSKPMKLSAAGMRLLRLA
EQILPQVEAMQAEFSSLRDGRSGRMHIAIECHACFEWLFPVLEAFRKNWPDVDVDIRPGLAFDALPALQK
EEVDLVVSSDPEEIAGVEFVELFDYNAVFVAASTHPLAAKPWVEAEDFRGETLITYPVERTRLDVFSQLL
IPARVEPAQVRQVELTAVILLLVASNRGVSVLPDWVVREVKYSSDYVTRPLTETGITRRLYAAVRSEDLE
KPFVQELVTLARSEARKLQSR
>gi|56697849|ref|YP_168220.1| 5,10-methylenetetrahydrofolate reductase [Ruegeria pomeroyi DSS-3]
MLRVRQEAKHRPLRRMTAQMTAPQISFEFFPPKNLEASFRLWDTVQVLAPLAPRFVSVTYGAGGTTRELT
RDAVATLHKSSGLNVAAHLTCVQASREETLAIADSFAQAGVTDIVALRGDPPQGEGRFTPHPGGFANSVE
LIQALAETGKFAIRVGAYPDIHPEASNAQADIDWLKAKLDAGADEALTQFFFEAETFFRFRDACAKAGID
KQITPGILPIENWKGARNFARRCGTHIPAWVEDAFDKATRDGREDLLATAICTELCSELIEGDVDKLHFY
TLNRPELTRDVCHALGVTPKVALQNVA
>gi|56697850|ref|YP_168221.1| thioesterase family protein [Ruegeria pomeroyi DSS-3]
MTFANGPEELLGPADMAHMSGLDFMQGILDGRLPAPPIARTMGYHLHSVDMGRVAFRGTPTFDVCNPLGA
VHGGWYGTLLDSAMACAVQTMVPQGAAYTTLEYKINIIRAIPTGTEVECTGIADHVGRSTGVAHGEIRGV
TDNRLYATGSTTCIVLNLPRG
>gi|56697851|ref|YP_168222.1| hypothetical protein SPO3018 [Ruegeria pomeroyi DSS-3]
MLNLSRLSRKLLGWLGRPLSAAHSGEVRQRGPQTHVIILDGTMSTLEPGRETHAGQTYRLMCEMGARVSV
FYEAGVQWTSWRTTPDVMMGRGLNRQIRRAYGYLASRYRPGDRIFLIGYSRGAYAVRSLAGVIDMVGLLK
AEHATVRNIRQAYRHYECDVQGPHAQVFRDLYCHRDVMIEMVGVWDTVKALGLRLPVLWRLSEQRHAFHS
HHLGRSVRHGYHALALNETRNVFEPILWDCKPEFRGHVEQVWFRGTHGDVGGQLGGDERARPLANLSLVW
MLERAEHLGLPLPKDWHARFPTDPNAPSVGTWSGWGKIFLLRSARTVGRDPSERLHESVIGDTLPEGLPA
PYLRSRSFG
>gi|56697852|ref|YP_168223.1| xanthine dehydrogenase family protein, large subunit [Ruegeria pomeroyi DSS-3]
MEKFGKSQPVTRVEDHRFLTGQGRYIGDAAPGDALVAMFFRSPVAHGEILDLDLGAARQMAGVHLVLTLA
DLEAAGVKVGLSGTTMANRDGSQGAAPERPMLARDHVRFVGEPVAMVVAETADQARDAIEAMGMDIRDLP
VVTKPVPGGPAIHPEAPDNRAFDWGLGDEAATEVAFASAAHVVSLRVDDNRIIANSMEPRGCYAEMAEGR
LHFAYGGQGVWGMKAQLAEKLGIDPEALRVTTPDVGGGFGMKAMPYPEYFTVAHAARVLNRPVRWISDRT
EAMLSDNHGRDLTSLAELAFDADLRITAYRVRTRCNLGAYNSHFGQAIQTQLFSRVLTGVYDIQTAWLQV
EGYYTNTTQVDAYRGAGRPEAIYVLERVMDRAARDLGVSPWEIRRRNFIRAEAFPYQTATGETYDVGEFD
RLLRLAEAEAQGFAARRAADAKRGLLRGIGLCYYIESILGDPSEGAEIAFNEDDTVDLMVGTQSNGQGHE
TVYARFLSDQTGLPMDRIRVVQGDSDRIAQGGGTGGSRSVTVQTNATLTTVDTMVAAFTPYLADKMGVAP
EAVHFDHETFRAPGSNLTPSLLEAAAMARADGRSDLLRHAARAKLPGRSYPNGAHLAEIVIDPETGQAHV
DRYRVWDDFGNLINPLLAEGQVHGGVAQGIGQALCEHVVHDGEGQLLTATFMDYALPRAHEVPIIGFTSV
PVPSTANPMGMKGSGEAGTVGALAAVANAVQDAIWDRGVRQADMPFTPLRLWEMLNAEPVAAE
>gi|56697853|ref|YP_168224.1| LysR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MVSRIPSLNWLRVFEAAARTQSFARAGAQLNMSAAAVSQQVKALEGHLGAALFERRAHSVVLTETGRAYL
PGVQQSLLMLETTTAGLFGAGGEQIVYVRSILLFAQGVLAPALGGFMAAHPGIDLRLSTGNDVADFQGSV
ADMQIVFGNPALFGGQADDLMGERLYPVAHPDLAAGITRPEDLLRHRLIDVSAHRAGWLRLFEALRLSPA
AGQFLFVDNTVMAAALAAEGVGLALARAPASDMLMARHGLVRCLPGVEAPGLERYHLVCEERARLRRPAR
QFRSWLLDHLGAGPGQAPSPFAEIGLDPRIGRLVEMQRQKGMLVAGVFDGVQPVAKGGFKVPHQPRRGHL
VPPIPQCQRRTPGGHAGARRGDVLSIHMQGIAAEQGQGGLAGNRAQDRVIGHQGQGETAGQAHADHADPG
GVFALADVAGKGPHPGGNRALPALEEHVELASDTEQAGHVAQGGGLAERAEEMRQVDGKPRRDQSIGQRQ
RLGADPGQLLQHQDGRARAFDMDIMAALPPAAQRGDKREARIRVPTGHAGLYAFC
>gi|56697854|ref|YP_168225.1| phytanoyl-CoA dioxygenase family protein [Ruegeria pomeroyi DSS-3]
MLTGKTYRSEPGLCTATLQHSEQTETPMPNPIPTDQGRLSTTQTAQYWQDGFLHPLRVMSEGEAATLRAE
LEQIERDWLAADLPLPLNMYKRVNAHVVMPLAARIARDPRILDLVEGVLGPDLLVWSAEFFIKEPRTTHV
VGMHQDLTYWGMGETPDQVTAWLALSPATVESGCMDFVAGSHKNPILPHTDTYSEHNLLSRGQEIAVDVA
ETDKTHIELAPGQMSLHHGLTIHGSGPNRSDDRRIGMAIRYLNPNARQLVAERDYAMPARGTDSSGNFIP
VEAPARLFAPEALALYERIRADQAKALAQGASSAVPLYQTTG
>gi|56697855|ref|YP_168226.1| valyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
MAMEKTFDAAEAEARITKAWEEAGAFKAGANRSRDESFTIMIPPPNVTGALHVGHAFNNTLQDILTRWHR
MRGFDTLWQPGQDHAGIATQMQVEKMLAATQQPSRRELGREEFLKKVWEWKGQYGGTIVEQLKRLGASCD
WSRNAFTMAGAAGDPRTGHENSPNFHDAVIKVFVDMYNKGLIYRGKRLVNWDPHFETAISDLEVENIEVA
GHMWHFKYPLAGGATYTYVEKDEDGNIVLEEERDYISIATTRPETMLGDGAVAVHPSDERYAPIVGKLCE
IPVGPKEHRRQIPIITDEYPDKNFGSGAVKITGAHDFNDYAVAKRGGIPLYRLMDTRGQMRADGAPYAAE
AGKAQDYARGRAFTENEIDVINLVPDHLRGLDRFEARAKVVDEITSEGLAVMTVASDPRLGTTALKPGAE
GADAIVPLVEAKPIMQPFGDRSKVVIEPMLTDQWFVDAEKVVGPALDAVRDGTVKIIPESGEKTYYHWLE
NIEPWCISRQLWWGHQIPVWYGPNRDDLGASYKAFCAASEQDALLLAQNYYGANVEVDFDSGPEELSGGI
AFGTIEGPGGQKTLQSVSLTRDPDVLDTWFSSGLWPIGTLGWPEDTDEMRRYFPTSVLITGFDILFFWVA
RMMMMQLAVVDQVPFHTVYLHQLVRDEKGKKMSKTTGNVIDPLEIVDEFGADALRFTNASMAAIGGVLKL
SKERITGYRNFTTKLWNAIRFAEMNEVFTDAVPQLSAAELAPKAAVNRWIIGETARVREEVDAALDSYRF
NDAANALYAFVWGKVCDWYVELSKPLLQGEDTEAQAETRATMRWVMDQCLVLLHPIMPFITEELWGLTAE
RAKMLVHADWPTYKAADLVDDAADREMNWVISVIENTRSARAQMRVPAGLYVPMIVTEIDDHGQAAWDRN
EALIKRLARIDSLTKADAMPKGCISIAAPGAAFGLPLAEIIDIGAEKDRLEKAKGKLAKELGGLRGRLNN
PKFVESAPDEVVEEARENLAAREEEEARLNEALARLAELG
>gi|56697856|ref|YP_168227.1| hypothetical protein SPO3023 [Ruegeria pomeroyi DSS-3]
MNTPIGVATGGGFCYAARMLNTLRSLIERQILKARAEGKLSGLEGEGKPLPDRSQEALSDPAVAAGFRIM
AQAGVIPEEFSVKKQLDDARAAFAQLSDPAERKAAMARIADLEMRYNMARDARRAFLK
>gi|56697857|ref|YP_168228.1| adenylate cyclase [Ruegeria pomeroyi DSS-3]
MERRLCAILAADMAGYSRLMERNETDVLNRQKLYRRELIDPAIAQAGGQIVKTTGDGMLARFDTAQAALR
CALEIQQAMQQREEDTPRKERIQYRIGINIGDIVLEDGDIFGDAVNVAARLEAISEPGAICVSDIVHQIT
QDRVSEPFTDLGLQKVKNITRPIRVWQWVPDADRDQSHDPQPSHVQHVSFCIAGDGTQLAWARVGKGPSV
LKAPNWLNHLDYEWRSPLWGPFLEQMSQRCDLVRFDQRGNGLSDRDPHEISEDAMISDMRSIVQAAGLDR
FLLFGISQGCAFSVRYAAENPDKVAGLILVSGYLRGSLKRGSPEQAAISEATNVLIREGWGSPNPAYRHL
FTESMMPDATEAQKAVFDELQRVSCSPEVAARINTMNATVDVSGFAPRIRVPTLVLHSEGDRRVPVAEGR
RMAAMIPGARFVTLPGNNHALIDNSPALDLFLSEFSSFLAEIVES
>gi|56697858|ref|YP_168229.1| enoyl-CoA hydratase [Ruegeria pomeroyi DSS-3]
MARVSVEYKDHVAFVTLTRGDKMNALDQAMFQAIIAAGQEVAASDARAVVLSGEGKSFCAGLDVANFAAF
AGQDPVEMLMPRSHGDTNDFQEVAMVWRRVPVPVIAALHGAVYGGGLQIALGADIRIAAPDTRLSVLEMK
WGLIPDMGGMVLLPQLVRSDVLRLLTYTARPIGAEKAAEWGLVTDLADDPLAEATALAQEIAGKSPSAIR
SAKRLIDQAEAMSREEVLLAESQEQAQLIGKPDQMEVIAAQMQGRAPVFK
>gi|56697859|ref|YP_168230.1| strictosidine synthase family protein [Ruegeria pomeroyi DSS-3]
MVRSCAPHKRKAGRRARLAFGALASHGARENTEVPMRYVLILLLALFGYLLFWPIPVAPVAYHPPETPGF
TGDFAENRVLDRAEFVTLPDGEIGPEDLAVMPDGTVYTTSLAGNLYRIDGAVPQLVDRLGGRPLGLKAGP
DGALYIADSFRGILRWTAPGEVETVVDQIDGAPVIYANQLDLGRDGTIYFSNSTDRFDPRTLGGTKPTSV
MTVWEQSDTGYVARRTPDGRVEKIATGFVYTNGVALSPDEDFLLINETGRARVHRLWLTGDKAGQSEVFL
DNLPGYPDNIEAQGDGTYWLAFASPRVPAEALMPYPFLRKVVWRLGPKVRPAPIHRGMLIQFDGTGRILR
TVQDPDGRLGITTGGKQVGARFYVMTLDSPGFARMDSADLR
>gi|56697860|ref|YP_168231.1| histidinol-phosphate aminotransferase [Ruegeria pomeroyi DSS-3]
MPGAPPCAYVARMTGPRYTPLAQSLPATVPFVGPETQERQRGAPFAARLGANENIFGPSPRAIEAMQRAA
AEIWMYGDPENHDLRAALATHHGVRPENIVVGEGIDGLLGYLVRLMVGPGDAVVTSEGAYPTFNYHVAGF
GGVLHKVPYAGDHEDPQALFAKAAEVGAKLVYLANPDNPMGSWLTGADIVAAMQALPEDTLLVLDEAYVE
CAPECTAVQVDLDDPRLIRMRTFSKAYGMAGARVGYALGAPELIAAFNKVRNHFGMNRAAQAGALAALAD
GGWLTHVQEQIAAARTRLGEIARENGLTPLPSATNFVTIDCGSDGNFAKCVLDNLVSSGIFVRMPFAEPQ
NRCIRVSCGPKADLDAFAAALPGALAAARS
>gi|56697861|ref|YP_168232.1| hypothetical protein SPO3028 [Ruegeria pomeroyi DSS-3]
MPVWPKMRMMDDRRIGRAPDYTVPALVMLGVNLTWILVLVWALWGFAAALLLAALVHHVITRLATRAR
>gi|56697862|ref|YP_168233.1| serine--glyoxylate transaminase, putative [Ruegeria pomeroyi DSS-3]
MTGNISLAQGRGYLAIPGPSVMPDAVLRAMHRAAPNIYAGELVDMMPGLMADLRRVVRTAHHATIYICNG
HGAWEAALSNVIAPGEVVLVPASGRFAHGWAEMAEGLGAECQVIDFGKSAPWDMDRIAEALKADTAHRIK
AVLAVHVDTSSSIRNDIAGLRAVLDALGHPALLMADCIASLGCDVFEMDGWGVDVTVTASQKGLMVPPGV
GFVFFNERAAAKRASMPRVSRYWDWVPRANPTDFYQYFDGTAPTHHLYGLRTALDMIHAEGIEHVWARHA
VLARAIWAACSVWAEGGDLVLNVADPAHRSHAVTALRLDSGKGTALRQWTETNLGLTLGIGLGMAAPGDP
AYDKFFRLGHMGHLNGQMVMGLLGGVEAGLRALDVPCGKGALEAAAEVLAAG
>gi|56697863|ref|YP_168234.1| efflux ABC transporter, transmembrane ATP-binding protein [Ruegeria pomeroyi DSS-3]
MSSQARDRPEHLHPARHLLKWAGHGFYPAPSPPHEGRKMSAKPMSSRELVGWLWQNYLKSRMGLLGVAFL
FMLLEGSMVGAISYMMQPMFDEIFVNGNGDALVWVSLAFLVIFSLRGMASVGQKVLLARISQETAAHLRF
DLLKRLIQQDTAFHQTHPPGFLIQRVQVDVGSVNQVWQVIITGAGKDLVSLVVLIGVAINVDLIWTLVML
VGVPIAFLPIAAAQRYVRKKAAMARDQGATLATRLDEIFHGIVPIKLNALERYQLDRFDGHMKTYVRSEV
RASFGTASITGLVDVMAGLGFMGVLLYGGAEIIAGEKSVGQFMSFFTAIGLSFDPMRRLASISGTWQAAA
AALERIKDLLDAPILLLSPPKPVAAPSGLPAIRLQDVSLSYGDAQVLRNLSLTAEAGKTTALVGASGAGK
STIFNLLTRLVDPQSGAVTVGDVAVEKMSLEKLRSLFSVVTQEALLFDETLRENILLGRTDVSEARLQEV
LDAAHVSDFLPKLEHGLETLVGPRGSALSGGQRQRVVIARALLRDTPILLLDEATSALDAQSEKVVQAAL
DQLSGGRTTLVIAHRLSTIRNADKIVVMERGEVVDQGSHEELLARGGIYADLYRLQFEGGKELVDPVGVA
AQERPGTEEPQRASAWYRRLMSRILG
>gi|56697864|ref|YP_168235.1| 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase [Ruegeria pomeroyi DSS-3]
MTSRDTRAICEMAPIVPVLVIDDAAHARPLAEALVAGGLPALEVTLRTPAALEAIRIMSEVPGSVVGAGT
LITPEDVRAAKAAGARFGVSPGATDRLLAACEEEGLPLLPGAATASEAMRLLERGYDMLKFFPAEASGGA
PALKAIGAPLPQIAFCPTGGVSPQNAESYLSLPNVVCAGGSWVAPKDLVAAGDWAGIEALARDAAALRRG
>gi|56697865|ref|YP_168236.1| phosphogluconate dehydratase [Ruegeria pomeroyi DSS-3]
MVHATIAQVTARIVTRSAATRGPYLARIDEARDQGPARAHLSCSGQAHAYAGAGADQQALATGSTGHLGI
VTSYNDMLSAHQPFERYPDVLRQAARSVGGTAQVAGGVPAMCDGVTQGAAGMELSLFSRDVIAMAAGVAL
SHNTFDAAVFLGVCDKIVPGLVIAAQSFGHLPAVFVPAGPMTSGLPNDEKAKVRQRFAAGEVGHAALMAA
EMAAYHGPGTCTFYGTANTNQMLMEFMGLHLPGASFVPPGTGLREALTAEAARRSLSLSALGDNYTPVGH
VLDERAYVNGIVGLMATGGSTNLLIHLVAMARAGGILLDWQDFAEISAVVPLVARVYPNGLADVNHFHAA
GGLGYTIHTLLEAGFLHPDTLTVAGRGLELYTREPKLRGDVLSWEAGTETSLNDKILRPASDPFQASGGL
SRLSGSLGTAVMKVSAVAPEHRVVEAPVRVFHDQNEVKAAFKAGELTGDMVVVVRFQGPKANGMPELHSL
TPILSILQGRGQKVALVTDGRMSGASGKVPAAIHVVPEALEGGPIARLRDGDLLRVDAEAGVLDILTEGV
LARAPATADLSGNQFGTGRDLFAAFRAVVGSADTGASVFGG
>gi|56697866|ref|YP_168237.1| glucose-6-phosphate 1-dehydrogenase [Ruegeria pomeroyi DSS-3]
MVSRVIPVNAFDLVLFGATGDLARRKILPGLFHRYEVGQMPEEARIIGSARTELSTEAFRADVRQAIEEF
TPETPTRAAVLERFLLKLDYVAVDARGDAGWQALAAMLRPDVVRAFYLSVGPSLFAGIARQLDCHGMATP
EARIVVEKPFGRDLETARALNAGLRACFEEHQIYRIDHYLGKETVQNLMALRFANSLFEPLWNATHIDHV
QITVAESLGIEGREAYYDQSGAMRDMVQNHLVQLLCLTAMEPPSKFTPNAVRDEKVKVIEALDPVPPGDI
ARGQYRADKGGDGYLDHVGDAQSRTESFIALKVHVANWRWAGVPFYLRTGKRLRARVSEIVVQFRDPPHS
IFPNVGPIHGNKLIIRLQPDEGITLRTTIKDPGPGGFRLAEVPLDMSFAEALGGDVRPQDAYERLVMDVI
RGDQTLFMRGDEAEAAWAWVDPIIAEWEKNRDRPYPYDQGSSGPEEALMLLHRDGRRWRQIGG
>gi|56697867|ref|YP_168238.1| phosphoenolpyruvate-protein phosphotransferase [Ruegeria pomeroyi DSS-3]
MADGTESESRKLLGRLREAMATDEAGQARLDRITHLIADSMGTEVCSIYLFRDTDTLELCATEGLKPESV
HQTRMRLGEGLVGRVAKSGKVVNTPNAPAAKGFRYMPETGEERYSSFLGIPVQRLGEKLGVLVVQSRDAR
EFSADEVYALEVVAMVLAEMAELGAFVGEGAALSPLHQKSALFRGSTGQEGAAAGHVWLHEPRVVITNPI
ADDPQRELERLNEAVDELRVGVDKMLEMSQNGDKEQLQVLEAYRMFANSKGWMRRMEEDIARGLSAEAAV
EKEQSLARARMGQVQDSYLRERLADLDDLSNRLLRILTGQGKQTGAELPPDPILVARNIGPGDLLEYGRS
LKGVVLEEGSVGSHAAIVARALAIPLVVHAERITTEALNGDQILVDGDQGVVHLRPEDSVVAAFRDKIAM
QADAQARYASIRETPAVTQDGQRINLVMNAGLMADLPSLESSGAEGVGLFRTELQFLVRNQMPKRSELVA
LYSRVLDAAKGKRVVFRTLDIGSDKVLPYMKPTDEPNPALGWRAIRVGLDKPGVMRMQLQALIRAANGRA
LTIMFPFVAQAEEYHAARAEVDKTIAREKVLGHPLPETLEIGAMLETPSLAFAPQKFFDDVGFLSIGGND
LKQFFFAADRENERVRRRYDTLNSSFLSLIERIVERCGISGTPLSFCGEDAGRPIEAICLAAMGIRTLSM
RPASIGPVKSLLLRTDLGELRKIITDARHRGVQSVRPAVMDWLSQRP
>gi|56697868|ref|YP_168239.1| aspartate kinase, monofunctional class [Ruegeria pomeroyi DSS-3]
MPTLVMKFGGTSVANLDRIRRAAKRVGVEVAKGYDVIVIVSAMAGKTNELVGWVNETSPLFDAREYDAVV
SSGENITAGLMALTLQEMDIPARSWQGWQVPLMTNSAHSQARIEEIPPHNINQKFAEGMKVAVIAGFQGV
SPEGRITTLGRGGSDTTAVAFAAAFEADRCDIYTDVDGVYTTDPRICTKARKLEKISFEEMLELASLGAK
VLQTRSVELAMRYKVKLRVLSSFEEQSDTAGTLVVDEEEIMESNVVSGVAYSRDEAKMTVVSVQDRPGVA
ATIFNALSEGGVNVDMIVQNVSEEGITDMTFSCPTDQVARAEKAMNAVKDAGELEFEDLLVDYDVCKVSV
VGIGMRSQSGVAAKMFKILSDEGINIKVITTSEIKISVLIDRKYMELAVQALHDAFELDKAA
>gi|56697869|ref|YP_168240.1| metallo-beta-lactamase family protein [Ruegeria pomeroyi DSS-3]
MKNLLANLTATAVIAASASVALSQEASHFDPKGKPPSQETIAIIEALRGSLPFEDERDFEEARKGFIAKP
DFTQIMAEKGNVAWDIGSYDFLLQGEDFDTIHPSLQRQAVLNMSYGLYEVMPDRIYQVRGFDLANFTVVK
GDTGWIVFDPLTAKETAAAALKLVNDTLGERPVTGVVYSHSHADHFGGVRGVVAEDDVREGLVPIIAPVG
FMDHAVAENVYAGNAMNRRLFYQYGVLLPRSPFGHVDQSIGKNTAAGNLGLIAPTVVIEDDIKELTVDGV
RMVFQNTPGTEAPAEMNTYFPDFKAFWAAENITGTIHNIYTLRGALVRDALEWSRQINAALYLFGQDAEV
MFASHSWPRWGNERIQEVMRAQRDTYANLNNGVLHLANQGVTINEMHNEYSVPESLQQQWSARSYHGSVE
HNSRAVINRYLGYWDANPATLIPLSPSESAPLFVEMMGGAGPIMARGQDLYDSGKYKLAQEILNKLVYAE
PENQEAKDLLADVFEQIGYQQESPSVRNSFLAGAYELRNGIPSGASPKSSGPDMVRAMDTYLWLDFLGVR
LDSAKAGDRSFTINMITPDNGEKFVIELSNGTLTNLQGYLADDPDLTMVLNRSDLEPVMMGMATIEDQIA
AGKVALAGDTGIIDELKAMLVQFDLGFEILPGTGEQDLTPEANAFQQPEPADTSGG
>gi|56697870|ref|YP_168241.1| LysR family DNA-binding response regulator [Ruegeria pomeroyi DSS-3]
MKHLKRHLPPLTSLLAFEAAARLGSFTAAAEELNVSREAVSRQIRVLESHLGISLFERDANRALMGAAGA
RFFATVSPNLNAIAVAAKEMAGEVSNGPLPESATQPGDDEELPSLLVVDDTPQNIHHLHGLLKDAYRIIP
QTSGKGALSFLSGELADLILLDIRMPDMDGYEVCRQIKSTASLADIPVIFLTSLDDPMDETKGLEMGACD
FITRPIVPAILRARIRSHIELRQAQTALEKLLARRADRLEKAEQLLTGICADIGQFQSS
>gi|56697871|ref|YP_168242.1| sensor histidine kinase/response regulator [Ruegeria pomeroyi DSS-3]
MRLKLKPAGITRKIALAAALLGVFSGLLLGVYTLLAEHSLRIGAARLNADRIVRATLPQIAGAYWEVDVP
AVRAILNGLLEDPVILSASVEDPLLTEAQRDSSGLIDLSVSRQPLSEPPWLGFLFQSGSQAEKLSYALSN
PRDGSEIGRLALELSFRPVQEDMVARSYVVLGSSILQALLVTAAIFLIVQLIVIRPLARLQAAALRVRDG
YSFRLKGRDQRMFDVNRQDEISRLARAFRRTVTELEASRDNLQELVDERTRELLEARNEAVEASQAKSIF
LANMSHELRTPLNAIIGLSGILLRDGQSNDNTRNLTDLRAAAKQLSENIDSILDLSKIEAGELVLEQVWF
RLDDLLDDVLMQTRALMVGQPVLLTWDYAPDLPDELCADPLRLRQIMVNFASNAVKFTKEGEIRLLASYH
DGALRLGVRDTGIGISPEQIEGIFKAFGQADGSTTRQYGGTGLGLSISQKLADKMQGKIQVDSEPGRGAE
FTMVLCLPTRPAPQQGETKDLIKVEGTGGPVRQLQIMADRAAAALTSQIRPVTVTVTAKHAEFALRSSGS
MAGKRFALPITHGEFAAALSELETGTGPTLPKNVFLAGRDVLVVEDNPVNLYVFVSLVEALGAKVRTATN
GIEAVEQVAEAMPDVILMDLHMPLMDGYRALENLQGRYQASLAPVVAATANATQDEAERCIAAGFAGFVP
KPIDPSKLHSILADLCGSGKYPGVDQKKGLFYAGGNRQHYEASLRRFHASLREWFAALEALADGPESQGR
ADLLHAIKGAASTVGADGLAELAAGAETGAVSIGKVAQALSRMLEQFDAFSPHVAKKLPLNSDRLERIGA
LVRNRDILALEETQNTALRGLLEPAAAAFESLTAALTALDFETADQIVEQLREALHDD
>gi|56697872|ref|YP_168243.1| polar amino acid ABC transporter periplasmic substrate-binding protein [Ruegeria pomeroyi DSS-3]
MNRLFQILEAICLIGIMMRPVHAETWVVGSMEGFAPFNYSINGEYSGIDVQILNEAAERIGVTLDHRPLP
WKRALLDFETGQLDAVFQLAPTPERFQKWNMVGPLRRTRTVFATLKGSPIQDIRSLSDLDGLVVGVVSGF
TYEARFDSYQLLQREASLDDFTNLRKLLLGRSDLIVGGYETLHYVASELNALDKLKFLPTPLAEHARYIG
FHRTPEGDDMARRLQAELERMQANRIPPEYLRYYFSR
>gi|56697873|ref|YP_168244.1| polar amino acid ABC transporter periplasmic substrate-binding protein [Ruegeria pomeroyi DSS-3]
MKHLIATTALASLTLAPIAATAAECTNDAWNRIQERGKIVVGVKADYKPWGFRDTDGSIIGMEIDMAAEV
AKTLGVELELTPVVASNRMQFLEQGQIDLMIATMTDRADRREIVGIVGPNYYTSGTNILAPKALGFSSWN
ELNGKPVCGVQGAFYNQIVEDKYGAQIVAFAGAAEARQALRDKKCVAFVYDDSSIGSAIASGEWEDFEMP
LASEDDSPWGLAVPKGEENCIFGRFMTGMQYSWHQNGSLINWEAKWGIKPTAYLQELNAKLADQVAE
>gi|56697874|ref|YP_168245.1| polar amino acid ABC transporter permease [Ruegeria pomeroyi DSS-3]
MAIGEIVGMTGFEAFFVQLAEDSPRWNFIWLYDEKQAGRILSGLWMTVKLSIACVLLSLVIGIAGAWLQG
TRNRALRASVQGYIQFFRNTPPLVQLLFFYFALGQFTPVVTGTDGWTEIPVISATGWAIISLSFFAGAFN
VEIFRAGIEAVPHSTREAEEALGMSRTQTFTNVVFPLALRVSIPALNNNLVNLVKTTTQAFAIAVPELLY
ESVSIWNDFPSAQNPTMLLLFVVYLGLVGVLVFGMNSWERKMRIPGYGQ
>gi|56697875|ref|YP_168246.1| polar amino acid ABC transporter permease [Ruegeria pomeroyi DSS-3]
MASNNFPGITGPARTDLPVLKPYVLSGGTYDEMFLVRWLAGMPPQFILLLLLAWPTMAFAQTASYGMGDA
FAALWRWIPFLTFQGFVFNVVISVFSMLIGTVAGAALGLGQISRNNWLRRLSWGVTQLFRNAPWLVILFI
VLLAFPFEFEIFGVVIPVPAWMKAVIGLSLPIMANISEIVRGAVMSVPSAQWEAAESLSFTRTQTLWQII
LPQCFKRMIPPWMNWYAILTMATPLCSMLGVGEIITFSRQAMEAENNRPELLVPFFGYALVLFFAYCYPI
ARITIALEKRYAVKL
>gi|56697876|ref|YP_168247.1| glutamine ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MNTWTSDQPIVSIRDVRKSFGPIEVLKGVSMDIMKGEVICIIGPSGSGKSTLIRCINALNDIQGGSITVE
GQEVHDPELDRLQLRKKVGMVFQQYNLFPHKTALENVMMAPVKVLKENKVEVEERARALLKKVRLEGKEH
SYPGELSGGQQQRVAIARSLAMRPDVMLFDEVTAALDPETVKEVLVTIKDLAADGMTCILVTHEMGFARE
VADHIYFTDKGVIVEHGAPNTFFDNAQDPRTKEFLSQIL
>gi|56697877|ref|YP_168248.1| LysR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MSRNKPSDQLPDFSLLRNFCVIAGSASLTEAAAKCDLSQPALSQQLQRLEAVLGVSLMERNTRPIRLTRA
GKRLAEGLPRQLQELVRLVEHVRSTPDVSRKKLRIAMPDSMSCTMGAEFLSVASSLAQSVELSAGISPWA
DDALLGRSFDLMVDSPPYDSLGYVNPVRIFNDPYVLVYPASLPPKRPEDFVVTDPQIAYAQTTKFGVRAA
RIARSLGADAEPAFSFDSSQSLLRFVQVGYGWAVTSVLCLYQTPAALRDLLIFPAPPDASRSLMLLSRTE
EMRDLSQDVTHRLIKVFRELVNGPWQKISPEAARFLRGANPDIFADPETPSPPR
>gi|56697878|ref|YP_168249.1| glutamine amidotransferase, class I [Ruegeria pomeroyi DSS-3]
MPEILIVESSSPGIASARRELGRAAPQNFSRVFAAAIPDIKIRVVEPYLKELTCADFDGVDGVVMTGAGD
DWAADDDLATPIRAACDLALETGRPVLGVCYGLQIATVCLGGKIAASPKGKETGLALKVELTEQGARHPM
MQGRRQGFSVACAHRDEVIRMPDGGQRLAYNAHSDVQAMSVQQSGVDFWGLQYHPEISPSIVANAIREHG
SLFSNTGIDIEDLLKVETDLETAQRLGCSLADFELPNRTRELINWIEYVASKTTVAA
>gi|56697879|ref|YP_168250.1| oligopeptide ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MTKLAEYDGPILEIDKLSISFFTRLREIPAVMDFSVTVQPGEAVGLVGESGCGKSTVALGVMQDLGKNGR
IVGGTIKFKGRDLAQMSAEELRDIRGNEIAMIYQEPMASLNPAMKIGRQLMEVPMIHEGVSADEARKRAL
EVVSDVRLPDPERMLNSYPHQLSGGQQQRIVIAMALMSKPALLILDEPTTALDVTVEAAVVELVKDLGKK
YGTSMLFISHNLGLVLETCDRLCVMYSGEAVERGSIKDVFDEMQHPYTQALFRSIPLPGADKNSRPLVAI
PGNFPLPHERPPGCNFGPRCDYFEAGRCDAQDILMEAVPGNDRHHTRCLKFREIDWNAPIMLAAQKEKGE
IGEVVLKMDNLKKYYEVSANALFGGGEKKVVKANETLSFEARESETLAIVGESGCGKSTFAKVLMGLETA
TDGHILLDNRSIEQIPIEERDTKTVSDVQMVFQNPFDTLNPSMTVGRQIIRALEIFGIGKTDGERQQRML
ELLDLVKLPRAFAERMPRQLSGGQKQRVGIARAFAGGARIVVADEPVSALDVSVQAAVTDLLMEIQREQK
TTLLFISHDLSIVRYLSDRVMVMYLGHVVELGTTDQVFSPPYHPYTEALLSAVPIADTSVIKEHIVLEGD
IPSAMNPPPGCPFQTRCRWKSEVPGGLCDKDVPPVRQLGDGHQVKCHLSDEVLARMGPVIKIAAE
>gi|56697880|ref|YP_168251.1| dipeptide ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MTDLTTFELIQQLLLRFLPVWACMAVILAGSITTRRKTGLYGQIFDSPVGIAGFSLVLFWVLTAIFANQI
ITHDPYGQFSGMKNAFPGSAIPGAEEDTFPWYLLGGDNLARDVFSRLVSGSRIVLTVSPVATVFAFLVGI
TLGLPAGYYGGRMDTALTFTANLIIAFPVILLFYLLVTPEIRAGGPTISFGAGHVWQASVPNVLAAIIFV
FPMIFFCLFWQSRFYVRPMLRNVLIAITLGVGVWAYLGTAFDYDPTGIFLIEPGLKNIFAIIAMVGAPAK
FRIVRGQVLDIKTRDFVAAAQTRGERSWYIMLWEILPNARGPLIVDFCLRIGYTAILLGALGFFGLGLTP
ESPDWGTTINEGRKFLALYAHPALAPALALMSLVLGLNLLGDTLREESLKD
>gi|56697881|ref|YP_168252.1| dipeptide ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MQAVAPSPPRPALIFGVAMRHFILRRLAVMLLTAACLTFVVFFLTNLMPNLEKLAKTEANARMSDAEVLS
WLTERGYTQDIFTKYGEWLGVVPSSRVNGGDGELYTRCARPERTAEVAPHYCGVLQGEFGFSTVFKEEVS
TVIAKRLGTTGYLMLAVLCVMVPLSLLIGVLAGMREGSLADRLLSTFAIITTSTPEYVSAVLLISFFASK
NAGISPVLVEWGMIEGPTLFKASAATAMKGITFANFTLPVLALTFYGMGYIARMTRASMTEVMTAQYIRT
ARLKGASFRAIVLKHALRNAMITPFTVIMLQIPWLLTGVVIVETIFNYKGFGWALVQAAGNNDIELLMGI
SVVAVIVVLLTQLISDIGYVFLNPRIRVN
>gi|56697882|ref|YP_168253.1| dipeptide ABC transporter, periplasmic dipeptide-binding protein [Ruegeria pomeroyi DSS-3]
MSFNKRTDELAGGSLPGHVLAAADHARSGSAMDRREFLALASVFGATAATAYGMLGMAAPAQAATPRRGG
TLRLEVGVHALKDTRTMDFAAMSMVASNWLEYLVEYNNDGTFKPRLLDSWEVNADATEYTLKVRKGVTWN
NGDAFTAQDVARNIERWCDAEVEGNSMASRMNSLVDPETKKAAAGAITVVDDETVKLTCRSSDITIIPGL
ADYPALVVHESYTPETMLTNPVGTGPYKPVEFEVGVRAAVERNTEHAWWGEGTGAWLDRIEFLDYGTDAS
AVLSAVEADEIDVTYNTSGEYLELIEALGWHTSEIATGSTVVIRANQQAEVNGQKPYADVRVRKALQMAV
DNNVVLELAFNNNGKVAQNHHVAPVHPEYADIGDPVHDPAGARALIEEAGMADFEHELISIDGGFRKDTA
DVVAIQLRDAGIKVKRTIMPGSTFWNDWTKYPFSITDWNHRPLGVQLYGICYRSGQKWNEAGFANAEFDA
LLDQAVAVADPAKRSEITAKMEQIMIDEAVIIQPYWRSLFRQSREGVLNAEPHISFLPQLYKWGWA
>gi|56697883|ref|YP_168254.1| hypothetical protein SPO3050 [Ruegeria pomeroyi DSS-3]
MMSVRRNTDQVIVIASYQAGVKARRLSGYR
>gi|56697884|ref|YP_168255.1| short chain dehydrogenase/reductase family oxidoreductase [Ruegeria pomeroyi DSS-3]
MHVLITGGNRGIGRELAARYRAAGHGVTATARDDSCDVALDVTDPAQHRAMAEQLAGRPVDLLICNAGVY
LDKGLTLDTYTAQIWADSFAANVTGVFLTVQALLPNLRAASGKIAIISSQMASHTRAPGGSYAYRASKAA
ALNLGRNLATDLAPEGIAVGIYHPGWVRTDMGGQGGDIDVAEAATGLIDRFAALSPQTTGCFETWDGRAH
AY
>gi|56697885|ref|YP_168256.1| hypothetical protein SPO3052 [Ruegeria pomeroyi DSS-3]
MIQYSLKCSAGHSFDSWFQSAAAYEKLAVAGMVACSVCGVTQVEKAIMSPRVTSARSNKDDRPLTAPASP
AEQALAEIRRKIEANSDYVGRDFVAEARRMHLGETPERAIYGEARVEEAKALVEDGIPVAPLPFLPNRKA
N
>gi|56697886|ref|YP_168257.1| NUDIX domain-containing protein [Ruegeria pomeroyi DSS-3]
MNAKLDRKAILQTAEALPRLQYGALCCRFDGDLPQVLLITSRGTGRWILPKGWPIPALDGAATAAREAWE
EAGATGQVAPDSLGTYCYVKLLDKRREVPCKVEVFALCVTALAEDYPEAGQRRRQWVTPAEAAALVDEPG
LQQLLIGLDPVALRGMCEPPGMARST
>gi|56697887|ref|YP_168258.1| hypothetical protein SPO3054 [Ruegeria pomeroyi DSS-3]
MQDIMIVAPVDAEAELEALAARYRAAGGTGIRLLNALGGQAEGLLDRLPHQVRAGLSDATERALVLAMRA
AQGSRVAVPAQSARNNMIWTTAMGAAGGMGGLPTALVELPATTTVLLRAIQDVAAEHGFDPAAENVQFDC
IRVFAAAGPLATDDGADLGFVSLRLTLTGGALYKMISAVAPRLATALGQKLAAQSVPVLGAVAGASVNYV
YTRYYQQIAHVHFGLRRLAVDADIPHADLVARLTEKMALSARV
>gi|56697888|ref|YP_168259.1| acetyltransferase [Ruegeria pomeroyi DSS-3]
MIEVKPETPDDWWEVEALYDLCFAPGRTALSSYRLRDDVPPVAGLSLVARDSDGTLAGAIRFWPVHVGDL
DALLLGPVAVHPTHQGEGLGGFLIQEGLEAGREGGWARVMLVGDAPYYSRFGFARLEGVEMPPPTNPDRV
LGLELIPGAWTGVSGRVTRWTR
>gi|56697889|ref|YP_168260.1| hypothetical protein SPO3056 [Ruegeria pomeroyi DSS-3]
MFYRPEDGHGLPHNPFNAIITPRPIGWISTRAADGTNNLAPYSFFNGAAYFPPQVMFSTTGSKPDQDNTK
DTVANIEATGVFCVNIVEYAMRDAMNATSQTLPREVDEFAHAGLTPVECETIACARIAGAPAALECKLTQ
IVTLPGESNRVVFGEVTGIHMRDECLKDGIFDVTTYQPLARLGYRDYSVVRDLFTLARPDD
>gi|56697890|ref|YP_168261.1| streptogramin acetyltransferase, putative [Ruegeria pomeroyi DSS-3]
MPLPDASRRYPITLPDGTDHAGTVFLNRVIDHPRFRAGDYSYASDFDPPADWAARLAPYLFATSAEMLTL
GRFCQIAHGVRFITASANHAMDGISCFPFPVFDPVQMASYQPDRRDTVIGHDVWIGYGAMILPGARIGNG
AIIGAGAVVRGTVPAYAVVTGNPGQVIRFRFDPDTVATLQTLAWWDWPTDRIARAEPALLSGDIDHLARL
SP
>gi|56697891|ref|YP_168262.1| sulfate transporter family protein [Ruegeria pomeroyi DSS-3]
MPRAFLASVANRLAIPDLRWMPDEPLTASRLRIELLSGLTVALALVPEAVAFAFVAGVHPLVGLYAAFLV
GLITALIGGRPGMISGATGALAVVMVALVAQHGVEYLFATVVLMGLLQLVAGVMQWGKFIRLVPHPVMLG
FVNGLAIVIFLAQMGQFKVPGSMENTGHGLGGGQWLSGGPLMLMLALVALTMVVIWIMPRVTRAIPAPLA
GIAVVAALVIGAGLEVPRVGDMASIEGGLPQFHIPMVPLNWETLEIILPYSVILAAIGLIESLLTLNLVG
DITGKRGGASQECIAQGAANVVTGFFGGMGGCAMIGQSMINVKSGGRTRVAGIAAALFLLVFILVGAPLI
EQIPLAALVGVMFMVVIGTFAWNSLMILRKVPLTDAFVTVLVTVVTVMEDLAVAVVVGVIVSALAYAWNN
AKRIHAVTRESHTAKGAKVYEIQGPLFFGSTDGFVELFEVEKDPDTVIVDFKESRVVDQSALQAIEAVAL
KYEDAGKQVMLRHLSRDCHQLLNKAGHLMVDSDDDPDYGLAVDYSVRTGILGGH
>gi|56697892|ref|YP_168263.1| hypothetical protein SPO3059 [Ruegeria pomeroyi DSS-3]
MRSLIPLLLSALIALPAHAQDMQGNDTAGNWRVTHHRLIGIWDSMCDERVEQGQLVQRCYLRHVDVFSPH
PEFAAQYLFVTPEDTGFAVEIGIEPGTLFAPGGIRIERAGERLWHSNWPGCLTGLGCAFSEGSAETLIEA
MRQGESFRFTFRDRHGKAQDRTWPLGQFEAAWQDFLDQSRQRGLTGADARQGG
>gi|56697893|ref|YP_168264.1| 5'-methylthioadenosine phosphorylase [Ruegeria pomeroyi DSS-3]
MRNTKIAVIGGSGIYDIDGLDAAEWVTVETPWGAPSDQILTGRLGGVDMAFLPRHGRGHVHSPTEVPYRA
NIDALKRLGVTDVISVSACGSFREAMAPGHFVIVDQFIDRTFAREKSFFGTGCVAHVSVAHPTCPRLSDA
CETSARAAGVTVHRGGTYLAMEGPQFSTLAESKMYREHWGSDVIGMTNMPEAKLAREAELCYASVAMVTD
YDSWHPDHGEVDVTRIIATLMGNADKGRAMVKGLPALLGAERAPCPHGCDRALEHAILTAPEARDPALLS
RLDAVAGRVL
>gi|56697894|ref|YP_168265.1| hypothetical protein SPO3062 [Ruegeria pomeroyi DSS-3]
MDPYLLARWLHILSSTVLFGTGIGTAFQMVWAMRTGKAETVHSVASGVAWADWLFTTPAGIAQPLTGLWL
IHLAGYSLLESWLLLTYGLYLLAFACWAPVVHLQIRIRDLAGAAQVTGAALPAEAHRLYRIWFALGWPAF
VALIGIFWLMVWRPALW
>gi|56697895|ref|YP_168266.1| transmembrane efflux protein [Ruegeria pomeroyi DSS-3]
MLRRLGQETPMPLDLWLAFVAASTALLLIPGPTVLLVLSYALSKGRGVAVASATGVALGDLIAMSASLAG
LGALVLASATLFAVLKWVGAAYLLWLGYRLFRSAGGAGLAQMRVSQDVSARSVLAHTAAVTALNPKSIAF
FIAFVPQFLRPEAPLLPQFAILIATFVGLAALNALAYALLADRLRRWVDRPSVIAGLTRTGGVTLMGMGL
ATALLRRPA
>gi|56697896|ref|YP_168267.1| hypothetical protein SPO3064 [Ruegeria pomeroyi DSS-3]
MFYALYIQCICEIFNRADGFVGKKDGKNAATKDAQLVLRLDKKERDAFVETCKALDTSAAREIRRFIREF
MKAHQDS
>gi|56697897|ref|YP_168268.1| hypothetical protein SPO3065 [Ruegeria pomeroyi DSS-3]
MSVHPHRNNKTEAIAMNLHTAQSLLIQDRRDWVKPHLSWLPATLYRSFASLKTRR
>gi|56697898|ref|YP_168269.1| adenine phosphoribosyltransferase [Ruegeria pomeroyi DSS-3]
MSRTKSVQDYIRTIVDFPHEGILFRDVTTLFADPRGFRIAIDQMLHPYAGERIDKVVGLEARGFILGGAI
AHQLSVGFVPIRKKGKLPGTTISQDYKLEYGEAIVEIHDDAIQPGEKILLVDDLLATGGTAAAGIKLVER
LGGEIVSCAFIIDLPDLGGRKVLESMGMDVHALCAFDGL
>gi|56697899|ref|YP_168270.1| oxidoreductase, FAD-binding [Ruegeria pomeroyi DSS-3]
MTLHPADESFANHLRSLLPAEVLRPVEPRYLSEPRGRWTGQAGVLALPRSTEEVARLIRAAGTKRVPVLP
YGGGTGLVGGQVMPEGPAPLLISLERMNRIRGIYPQENVVVAEAGCILADVQSAAGDAGRLFPLSLASEG
SCRIGGNLATNAGGVGVLRYGNARDLCLGLEAVLPNGEIWSGLTRLRKDNTGYDLRNLLIGSEGTLGIIT
AAALKLFPQPGSQGTALLTVRDPQAALDLLALARGQVGEGVSAFELIHRQSFDFLAETLPHLRQPLDPVP
EWSVLVELGLSGGLDAVTALEALFEAAVEAELVIDGVVAQSEAQRGALWSLREHIPEANRRIGSISSHDV
SLPLSELPAFIQRGQEAVSAMGPFRINCFGHLGDGNLHYNLFPPKGRDRSDYAVQATELKRLVHDLVHDF
GGSVSAEHGIGRFKTGDLQRYGDPAKLAAMRAIKTALDPAGIMNPGAVLA
>gi|56697900|ref|YP_168271.1| hypothetical protein SPO3068 [Ruegeria pomeroyi DSS-3]
MRPACATIGVMWRLLLALTVLAGSASAQERRPSHCIAIADAAPGIAYLHKAGWQDPVPDYSVRISYIAHA
SFLIQTPGGLNAVTDFTGFIGSADLIPDVVTMNHAHETHWTQFPDPAIPHVLQGWGPFGKGIEHHLDLGE
MLIRNVSTDIRSVYGGVEERGNSIFVFEVEGMCIGHLGHLHHVPDDAQFAALGRLDVVMAAVDGGTTMPL
PEMIAVLRRLKSSVIIPMHWFSGHSLDRFLAGVRNDFDIRRDGVSEIDISLRTLPDRPTVVVLEQRYLVD
LD
>gi|56697901|ref|YP_168272.1| ribosomal-protein-alanine acetyltransferase, putative [Ruegeria pomeroyi DSS-3]
MLLGRRKLKLETERLSLRLPAHSDYADWAALRRASRDYLVPWEPSWAHDHLSRKSFTNRVYWAQRSVASG
SAVPLFLFRRSDDVLVGAITLDNIRRGPAQAGTLGYWTGQNHARQGYMREAIGAVVHHAFAQLDLSRLEA
ACLPENMASRGLLESSGFKYEGVAQSYLQINGRWRTHVLYACLRSDRRGKTDVG
>gi|56697902|ref|YP_168273.1| M16 family peptidase [Ruegeria pomeroyi DSS-3]
MTVRQDQLANGFRIVSENMPGLQSAAIGIWVTAGGRHERIDQNGIAHFLEHMAFKGTERRSALQIAEAIE
DVGGYINAYTSREVTAYYARVLKEDVALALDVIGDIVLNPVFDPREIEVERGVILQEIGQAHDTPDDVIF
DWLQEESYRDQPLGRTILGPVERVSAFSRADLSAFVADNYGPEQMILSATGAVDHDLLVRLAEEMFGHLT
PRKGALAVPALFTGGEARREKALEQAHFALALEGPGYRDDAIYTAQIYSSALGGGMSSRLFQEVREVRGL
CYTIFAQTGAYADTGTTTIYAGTSAGQVAELAGITIDEMKRAAEDMSEAEVARARAQMKAGMLMGLESPS
NRAERLARLVQIWGKVPSLEDTVARIDAVTTADVRAFAEQMAVEAPAALALYGPVSAAPNLAELQERRAA
>gi|56697903|ref|YP_168274.1| threonine synthase [Ruegeria pomeroyi DSS-3]
MKYISTRGQAPELTFEEAMLTGLARDGGLYLPAEIPVMGQDEIAALAGLPYEEIAFRVMWPYVSGSFGED
EFRGIIARAYQGFGHAARAPLKQLNENHFLLELFHGPTLAFKDFAMQLIGQLFQAALARRGETVTIVGAT
SGDTGSAAIEAFRGLDAVNVFILFPHGRVSEVQRRQMTTPADSNVHALAVDGDFDDCQARVKDMFNDFAF
RDGVRLAGVNSINFARVLAQVVYYFSAATSLGAPHRKVSFTVPTGNFGDIFAGYIAKRMGLPIEQLVVAT
NQNDILHRCLSGEGYFKGETIPSISPSMDIQVSSNFERALYYAYGQDGAAVSQLMDELQQGGFHVSQGAM
QALRDSFTSGRASEEETLATIKATLAASGELLCPHSAVGVKVAEEARRADEAPMITLATAHPAKFPAAVE
QASGVFPPLPPRMSDLYERPERVTRIANDLAALQDHIRRHIPA
>gi|56697904|ref|YP_168275.1| SURF1 family protein [Ruegeria pomeroyi DSS-3]
MRRVLFLLFIGLAGLAVLIALGSWQLRRLSWKEALLADIDSRIADAPQALPEHPDPERDRYLPVAVSGEI
EGEELHVLVSVKMVGPGYRVIAPFVTDEGRRILVDRGFIPTTAKQDSRETGPMRVEGNLHWPDEIDGYTP
SPDLNGNIWFARDVPAMAARLGTEPVLLIARAPTGPGITPLPVDSAGIPNTHLQYAITWFGLALVWAAMT
SLFLWRGRARKKG
>gi|56697905|ref|YP_168276.1| cytochrome c oxidase, subunit III [Ruegeria pomeroyi DSS-3]
MAHAKNHDYHILAPSIWPLIGSIGGFVMLFGAVLWMHGITPYMFWAGFIAVLYVMYAWWAEVVAESRVGD
HTPVVRIGLRYGMILFITSEVMFFFAWFWSFFKHRMYPMQEYVGTEYVAPSIHAVDPFHLPLINTLVLLL
SGCAVTWAHHALVHNNDRKALIQGLSIGIFLGMIFTLLQAYEYAELLLHEDWTFGGDQFYSNFFMATGFH
GMHVIIGTIFLAVCLLRALKGDFTPEKHIGFEAAAWYWHFVDVVWLFLFFAVYIWGQWPLL
>gi|56697906|ref|YP_168277.1| cytochrome C oxidase assembly protein [Ruegeria pomeroyi DSS-3]
MALNGPQKTVVQLVSVVVVMGGLAWASVPFYDWFCRVTGFGGATGVAEAGSDTILDKTIKVRFDASKERG
MPWEFRPVQTEMELRIGETGLAFYEAYNPTDRPVAGQASYNVAPYSAGGYFDKIACFCFEEQVLQPGERV
QMPVTFFVDPEIVNDRDAKYVHTITLSYTFYEIDLPEGYAALDAGEKTNTN
>gi|56697907|ref|YP_168278.1| protoheme IX farnesyltransferase [Ruegeria pomeroyi DSS-3]
MSDASFNASTARAAHRPDEAGFGDYFALLKPRVMSLVVFTALVGLVAAPVSVHPFIGFCAILFIAIGGGA
SGALNMWWDADIDQVMKRTKKRPIPAGKVEPGEALALGLGLSGLSVMMLALATNVLAGAFLAFTIFFYVV
VYTMWLKRTTPQNIVIGGAAGAFPPVIGWIAATGDMSVEPWLMFALTFMWTPPHFWALALFMRSDYDDAG
VPMLTVTHGRRATRVHILIYTILLALLALGTAFSNIGGPIYLAVALVLNALFLLGAIRIWRRDEADSEAD
NFKTERGFFKLSLLYLFLHFGAILAEALLRPYGLGGWG
>gi|56697908|ref|YP_168279.1| cytochrome c oxidase, subunit II [Ruegeria pomeroyi DSS-3]
MKNALTLSALLAALSSLPAAAQELEIIGKPVDGGMGFQPAATELARDLQWLDGMILVIITAICLLVAALL
VWCIVRFNSRANPTPAKFSHYTPVEILWTVGPIVILLFIGSYSLKELFDQQEIPEGEINIKVTGYQWYWG
YDYTDEGFGFESFMLGRDALEEHGYSQDEYLLATDTAVVVPVGKVVVMNVTGADVIHSWTIPAFGVKQDA
VPGRLAQLWFKAEKEGIYFGQCSELCGKDHAYMPITVKVVSEAEYAKWLASAKEEYAGLPTSYQVASN
>gi|56697909|ref|YP_168280.1| TldD/PmbA family protein [Ruegeria pomeroyi DSS-3]
MAQDPFRPFETALPQDEALAVLRAATDGAEDGELFVERRKSEALSFDDGRLRSASYDASEGFGLRAVKGE
VAGYAHSTDVSIPSLRRAAETARLAVGDGGGTLAGAPARTNRKLYTEDDPIDSAAFPVKVETLREIDAFA
RDLDSRVVQVSASIMASLQEVEILRPDGVHLRDVRPMTRVNVSVIVERDGRRESGSAGGGGRVGLDGLIA
PEAWQAQAREALRIALVNLDAEPAPAGVMEVALGPGWPGILLHEAIGHGLEGDFNRKGTSAFAGLMGQQV
AARGVTVVDDGTLPDRRGSITVDDEGTPSRRTVLIEDGILTGYMQDRQNARLMGVEPTGNGRRQSYAHKP
MPRMTNTVMLGGNADPADLVAEIKDGIWAVGFGGGQVDITNGKFVFSCTEAYRVRNGRIGAPVKGATLIG
DGPSALQRIRGLGNDMALDPGMGTCGKDGQWVPVGVGQPTVLMDGLTVGGSAA
>gi|56697910|ref|YP_168281.1| DNA processing protein DprA, putative [Ruegeria pomeroyi DSS-3]
MTEEQFSSYHPPLPPTTEEDRFSWLRLLRSRRVGPTTFRRLMHEHGTAQNALAALPEVARAAGVEGYEIC
PPGVVEAELKAAKAAKARLLCLGDADYPSHLAGISDAPPLLWLLGDPALLRRPMIALVGARNASSLGTRM
ARALAQDLGTAGFVVVSGLARGIDTAAHLAALPSGTIAVMAGGVDTVYPAENTHLAADIAQHGLRLSEQP
MRLTPQARHFPRRNRIISGLAQAVVVVEAAAKSGSLITARDALDQGREVLAVPGHPFDARAAGCNMLIRD
GAHLVRNAEDVITALPALTAPQPQPDLCDLMQQPAPPAKRSLRETVALHSLILDRLGPSPVAEDQLIRDL
AASPGEVAPVLVDLELEGRINRQAGGLLSRVN
>gi|56697911|ref|YP_168282.1| DNA topoisomerase I [Ruegeria pomeroyi DSS-3]
MPVVVVESPAKAKTINKYLGSDYTVLASYGHVRDLPAKDGSVDPEHDFDMTWEVAADSRKHVKAIADALA
EDNELILATDPDREGEAISWHLQEALTKRRSIKKGTAVSRVTFNAITKDAVTKAMQNPRQVDMPLVEAYL
ARRALDYLVGFNLSPVLWRKLPGARSAGRVQSVCLRLIVEREMEIEAFKPVEYWSVKALLETPRGQVYEA
RLVTLAGNKLDKMDISNATQAELAVQAITSRALSIQSVEAKPAARNPSAPFMTSTLQQEASRKFGMGARH
CMSAAQRLYEAGHITYMRTDGIDMAPEAVMATRDAIADRFGAEYVPDSPRMYKNKAKNAQEAHECIRPTD
MRKDAAALKLKDEDQRRLYDLIWKRTIACQMAAARLERTTVEIGSADGQVGLRATGQVVLFDGFLRVYEE
GRDDVENDEDKRLPQISMGEKAVFAKTSLADQFARATGDTPLTEGAKIAKEAILSENEAVLALQHHTQPP
PRYTEATLVKRMEELGIGRPSTYASVITTIQDREYVRKDKNRLIPEEKGRIVTIFLLNFFRQYVGYEFTA
NLEEQLDDVSAGSRDYKDLLGRFWRDFSAAISETSELRISEVLDKLDEALAPQLYPPREDGSDPRICPKC
GTGQLHLKTSRTGGFVGCGNYPECRYTRPISGDADDSAERLLGEDGGDEIWLKAGRFGPYVQRGEISEEN
KKPPRASLPRGWSAEDLDLEKALVLLSLPRQIGQHPEGGMISSNFGRFGPYLMHQLPDEAKPIYANLKDP
SDVFEIGMNRAVELLAEKRANPRGRGRAAAKPLKELGEHPEHGGAVNVLDGRYGAYIKWDKVNATLPKDV
EAADVTMEMAVALIAEKSTKKGTKKKAAPRKKTTKKAAEE
>gi|56697912|ref|YP_168283.1| TetR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MQEKNAPVPNADRRAAMRARLIAAARALFVDKGYAETSTPEIVRAAEVTRGALYHHFADKADLFRAVVEA
EAEALVSRIDAEAVDAGAGGMEAGSAAFFRAMAEPGRARLLLIDGPAVLGPDEMSRIDAGGGRASLRAGL
DLVVSGVGEAEMQALTEVVSAAFDRAALAIAQGAEPAPFEQAMARLVAGLGER
>gi|56697913|ref|YP_168284.1| glyoxalase family protein [Ruegeria pomeroyi DSS-3]
MKTTQYYPVIQTGDVQGTADFYRSHFGFHTAFEADWYVHLQSSADPSVNLAILDGQHETIPAQARGPVRG
VILNFEVADAAAEYDRLTAAGLPMLKPLKDEAFGQRHFITADPNGVLIDVITPIPPSAEFAAQYSAEALP
Q
>gi|56697914|ref|YP_168285.1| 3-oxoadipate CoA-succinyl transferase, alpha subunit [Ruegeria pomeroyi DSS-3]
MKKVYANATEALDGLLQDGMLIAAGGFGLCGIPELLLQAIKESGAKDLTFASNNAGVDDFGIGILLQTKQ
VKKMISSYVGENAEFMRQYLSGELELEFNPQGTLAERMRAGGAGIPGFYTKTGVGTVIADGKEHKEFNGE
TYILEEGIFADLSIIKAWKADDTGNLVFRKTARNFNVPAATCGKICIAEVEEIVPRGELDPDCIHLPGIY
VHRIIQGEHEKRIEQRTTRKREEA
>gi|56697915|ref|YP_168286.1| 3-oxoadipate CoA-succinyl transferase, beta subunit [Ruegeria pomeroyi DSS-3]
MPWDRNQMAARAAEELEDGMYVNLGIGIPTLVANYVGDKDITLQSENGMLGMGPFPYEGDEDPDLINAGK
QTITELARTAYFDSATSFAMIRGGKIAAAILGAMEVDEKGDLANWMIPGKLVKGMGGAMDLVAGVGRVVV
VMDHTNKHGESKVLKECTLPLTGKGVVDRIITNLGVLDVVEGGLKIVELADGVSEAEMRAATEATLVN
>gi|56697916|ref|YP_168287.1| Slt family transglycosylase [Ruegeria pomeroyi DSS-3]
MAKSPHFGWFFSVEGGFCTVESGKNISRGEQMVLRYITLIASAAVFAAVAESRAESPAPLPEVKFKRVRA
PVPGARPRVDVQISAEEHARAPVAGRQKPIEAEEVVTAAAAPLPDAAAPTGRYAWFWDKISPALGPDRPR
QLEDMLSALSAGGVDAPRLQALQDIARAQGISILRSTVGTEVSPALVLAVIAVESAGRADAVSGAGAQGL
MQLMPATAARFGVADSLSPDENIAGGVRYLNWLMEEFGRDPVLVLAGYNAGEGAVRKHEGVPPYAETRDY
VPKVLAAYQVARGLCTTPPELITDGCVFTAMQ
>gi|56697917|ref|YP_168288.1| hypothetical protein SPO3085 [Ruegeria pomeroyi DSS-3]
MIKFIKNFRKDEDGAVTVDWVVLTAAVVALAAVAYNGISTGTGTLSTAINTELGTVTPDTGL
>gi|56697918|ref|YP_168289.1| CpaB family protein [Ruegeria pomeroyi DSS-3]
MARMADAGQPERKRGDKMRAVFGLVLIVGIALAGGAVMMARNYISAYQNELARERQARAQIVPTKTVYVA
SRPLRYGERLTKEDVRAVNWPENAIPEGTFLDAAMLFPERQEENRYVLRAMEKDEAIMAIKVTKPGEDAG
LTSQLARGMRAFAIKVDVTSGVSGFLRPGDRVDVYWTGGLSGATGPLEGMQGEITRLIQTNIQIVAIDQI
SGGDVTGANIARTVTVAALPQQVASLAQAQTTGRLTLALVGADDDTIAAAVEVDQRMLLGLGALEAAPEK
AEEKVCTIRTRRGAEVVDIPIPCTN
>gi|56697919|ref|YP_168290.1| type II/III secretion system protein [Ruegeria pomeroyi DSS-3]
MIGKAGHMKIDGLIKAALTGLALACSPMTGLAQAQDLRVVKQGAAETLDVPMNRAIVVESETPFAELSIA
NAGIADISSLSDRTIYVLGKSPGLTTLSLFDAGGRLITNVNVRVSFDVAEFKERLKQILPNEKIEVRTAN
DGIVLSGTASSTARLQRALDLAERYAPERVSNLMSVAGVQQVMLKVRFAEMQRSVSKSLSASLGVSGGNI
VGGLNTLNSSGSLTNAIGGSIPALNDNAGAILFGFSAGSTQVRLLLEALERKGVVRTLAEPNLSALSGQE
AKFLAGGEYPIPVAQRDGLFTVEYKPFGVEMAFIPRVVDGDLINLELLAAVSSLDPNNSVTVNGFDIAAF
QRRETSTTVELKDGESFAIAGLIEDEFLDNNQQLPWLGDVPVLGALFRSANYQRSQTELVIIITAHLVSP
TRGEALALPTDRVKPPSEADLFLRGKTARTERARGGAASEVARQDFSGSYGYVLE
>gi|56697920|ref|YP_168291.1| OmpA family protein [Ruegeria pomeroyi DSS-3]
MGPMRNWMMCLGLAGTLSACGIEAGYQVDSGTFGNATLNNTQMMNGERSYTQVLADRFAREIPTQINFAF
DSAELDATAQQVLTLQADWIRQFPEVRFRVYGHTDAVGSSGYNKSLGMRRARAVVSFFASRGISRSRLEA
VVSYGETQPLVPTGERERRNRRTVTQVSGFVDGNQNLLDGKYAQVVYREYIKSAEPKTTVEIDTSSSAFE
Q
>gi|56697921|ref|YP_168292.1| ATPase, putative [Ruegeria pomeroyi DSS-3]
MTCDQIPGRMRVKAERTPFRCPTPVKRKKAMSSAMPQPETTPILACTVSRDVQNFDLLIEDMEAAMGESW
GDLGFAEALAFFGQPESESLEFIALAIDTEDEDNLVLMGEIITQAKSRGIKVILIAEDVTPASLHQLLRK
GADEFVPYPLPERELQSAIDRMSKPEPEQAQTHHNTAHLNKGAAREGALIVVHGLAGGTGSTTMAVNLAW
ELANIGGEDAPSVCLMDLDLQHGSVSTYLDLPRREAVFEMLSETQSMDEEVFGQALLSFEDKLQVLTAPS
DMVPLDILSPEDIQRVIEMARAHFDYVIVDMPKTLVQWSETILQAAHVYFAMIELDMRSAQNALRMKRAL
QSEDLPFNKLRFALNKAPKFTDLSGKSRVKRMGESLGISIDLQLPDGGKQVTQGADHGLPLATSAPKNPL
RREIAKLAQSLHELGRSDAKAA
>gi|56697922|ref|YP_168293.1| type II/IV secretion system protein [Ruegeria pomeroyi DSS-3]
MFSRYKKTDKAMPVAAMAAKKAETPAAAVEPVASASLRRPAQKQAAEVVPQDRDRKRKERLSELKIELHR
DLLENLNLSALEHAAEAELRAEITAITSEVLETKGVVLNREDRMQLNKELYDEVTGLGPLETLLQDDTVN
DILVNGPQQIFVERAGKLQLTDITFKDERHLLRIIDKIVSAVGRRVDESNPYVDARLADGSRFNAMVPPI
AVDGSLVSIRKFKKDKLGIDDLVKFGAFTEEMAAYLQAAVATRLNVIVSGGTGSGKTTTLNALSSFIDNA
ERILTIEDTAELQLQQVHVGRMESRPPNVEGKGEVSPRDCLKNALRMRPDRIIVGETRGEEVIDMLQAMN
TGHDGSMTTIHANSARDGVSRLENMIAMAGIEMPIKAVRSQIASAVNLIVQASRLQDGSRRMTSITEITG
MEGDVISMQEIFRYQRVGLTPDNKIIGHFTATGVRSHFSERFRMWGYDLPPSIYEPTTM
>gi|56697923|ref|YP_168294.1| TadC family type II/IV secretion system protein [Ruegeria pomeroyi DSS-3]
MQLSAEPIIYGLIFVGVLVLVEGLYLVAFGKSISLNSRVNRRLEMLDKGTGREQVLEQLRKEMQQHMKSK
SIPLYSLLAEKAQKAAIAFTPRQLIMIMFLLAGIAFVGLSIGTQTEVKLRAAISVAIGIAAVYLWVNQKA
KKRLSLIEEQLPDSVELMVRSLRVGHPLVSAIQIVAKESEDPIATEFGIIADEAAYGREVGEALKEMAER
LDMQDLRFLSVAVTIQQQSGGNLAEVLAGLAKVIRARFRLFRRVKAITAEAQWSGKFLSAFPLGALLFIL
VKDPNYYDGVMDHELFIPACFVVGVMLTMNLFVMRMLTNIKV
>gi|56697924|ref|YP_168295.1| TadC family type II/IV secretion system protein [Ruegeria pomeroyi DSS-3]
MEFLNQINDFLTGHLGEFGPLIAVGVLGLFMVLLAVPLLMSQPEDPLKKLKREMNPNTLAKPKKEQLRQS
GRNEQLQRFANFLEPQDADELSAMQLKLRQAGYQSKDAVRFFHFAQMALGLVGLVLGVLYVFVIEADKDL
DGQAMLIRVLGPGGAAYFLPRYWITRRVDTRKENITRAFPDALDMLLVCVEAGQSLDQSIVRVSKELRAS
YPDLADEFEMVAYEMKAGKEKDKVLRDMGTRCGVVDVSSFVTVMIQSSQFGTSIAEALRVYAGEMRDKRV
MRAEEAANKLPTKMTLATMMLTVPPLLIILVGPSAKGIMDLGNMSN
>gi|56697925|ref|YP_168296.1| TPR domain-containing protein [Ruegeria pomeroyi DSS-3]
MTSSAAPVRRPSLVLAWATVTAVTVASCTKSDDIALPDNPFPPGVDHRKQAVSGVEVGQRLMSAGEYELA
LDAFTRAALDEGMTTEILTGLGTANLGLGRLGQSETMLRRAVEEAPDWPEAWNNLGVLLMEKDEIAEATA
VFRKAYALDNGESDSIRNNLRIALAKSENPVINTVQKEEFKLVQRGQGDFLIRKTP
>gi|56697926|ref|YP_168297.1| putative lipoprotein [Ruegeria pomeroyi DSS-3]
MRHFILIPVMLAGGLTLSACSDKADETVERAFQDVNVVDETNLNDVMLTVADPNEAVDYFQRASKDNPER
VDLQRGLAKSLTRAHRNTEAVSAWNRVIGMKGATADDSVDLADALIRNNDWERAEQVLDSVPPTHESFKR
YRLEAMVADSNKEWKNADTFYEIAVGLTTRPAGVMNNWGYSKLTRGDYAEAERLFGDAIRQDGNLFTAKN
NLVLARSAQRNYTLPVVPMTQIERAQLLHTMALSAVKQGDVTTGKALLREAIDTHPQHFEDAVRSLRALE
TG
>gi|56697927|ref|YP_168298.1| hypothetical protein SPO3095 [Ruegeria pomeroyi DSS-3]
MALPAYAALWFLPFALPICLYVAYTDLAELKIRNHAVMALAGVFLAVGLIAYPPFTGEWASGRIGPVPMA
LPTYVWQLLHLPLILLVGIVLNAAGAMGAGDAKFLAAAAPFVWTADLILAMAILAASLLGAFTTHRIAKH
SGLRRFAPNWKSWDSGKKFPMGLALGLWLVTYLALGAARGS
>gi|56697928|ref|YP_168299.1| hypothetical protein SPO3096 [Ruegeria pomeroyi DSS-3]
MMPHCSITIRAKRDTRRHVTRTTAGTPMNMQPTAVIAPPAPKGIAEMQLPVVMMRDILLKTVFRKNVETA
REVAEAICLPLSVTQELIDMARTQKLLEATGTLNANSGTEMGYQLTDAGKSRALDALSQSEYFGAMPVPL
EVYREQVKRQSIRNIQVTRDQLVKAMGHLVLPDSLLGHLGPAVSAGRSILMYGPPGNGKSSISNGIRDAL
GDNVYVPRAIEYSGQVITVFDPIVHTAVEQEPDDPTQLRRRARFDSRYVMCERPTVITGGELSLSMLDLV
YNPTARTYQAPLQLKSTGGIFIIDDLGRQAEPPQAIINRWIVPLEEGKDILGLQSGEKFEVPFDTLVIFS
TNFHPNEIFDQAALRRIFFKIKIDGPNQENFLKIFAMVARKKGVPLDEKALVHLLKVKYPTIDNIYANYQ
PVFLIDQMIAICEFEGIPYQMSPDLIDRAWANMFVRDEKIVK
>gi|56697929|ref|YP_168300.1| 3-hydroxyisobutyrate dehydrogenase [Ruegeria pomeroyi DSS-3]
MIGVAGCGRMGAPMLAALRRAGFQAQGFDIRPSSDFPGTDHGITDGVAVFSQNLCTLITVVRDISQTEQV
LFTDQKLIHAKHLDCVIICSTLSPRYVRDLRARVPDHIALIDAPMSGAQIAAQEARLSFMLGGEPADLDA
AQPLFAAMGSHFHRMGPYGSGMQAKVLNNLLAAANTAMTRLVLDWADAAGLDEVALLRLIHTSSGQNWFA
SNFDQIEFARDGLSEDNTIGILVKDVESALDAAPPGTDTTLPRSVQAAIRSLRPRPSSV
>gi|56697930|ref|YP_168301.1| DEAD-box ATP dependent DNA helicase [Ruegeria pomeroyi DSS-3]
MPQLPALLTDWFTAKGWSVHPHQQAMFDRADRPATLLIAPTGGGKTMAGFLPTLAELAEGQHQGLHTLYV
SPLKALAADIKRNLRTPVDEIGLAVRIEDRTGDTSATQKKRQRADPPHILLTTPESLALLTSYEDAPRMF
AGLRRVVVDEIHALAESKRGDQLMLALARLQTLCPDLRRVGLSATVEDPQAIARFLARHPDPCEILLADP
GPDPDIAMLETEEMPPWSGGGAAYAIPAVLEQIRRHKTTLIFHNTRAQAEIFFHNLWLANDEGLPIGIHH
GSLDRAQRERVEAAMVRGELRAIVCTGSLDLGIDWGDVDLVIQIGAPKNVKRLVQRIGRANHRYNAPSKA
LLVPANRFEVVECIAALEAVRAHALDGDPRGPGPRDVLCQHILIAACSGPFDADALFAEMTSAGPYADLA
RSEFDACLDFCATGGYALRAYDRWQRLQQRPDGQWQLRDPRSAQRIRQNIGTIQDTDTLKVRLRRNRGGK
PLGEVEEGFAASLTPGDTFLIGGQIVRYEGLREMVVEVSRRADKKPKIATFMGTKFATSTQLSARILDLF
AQDHWPQLPRHTAEWLALQRQVSRLPERGRLLVESFPQDGREHLCVYGFAGRNAMQTLGLLLTKRMEETG
LNPLGFVATDYAVLIWGLEATTDPVPLFEIDSLRAGLDQWLAGNAVMKRTFRASATIAGLIERNLGGQRK
TGRQATFSSDILYDTLLKYDPDHLMMQITRAEAMRGLVDFGRIEEMIARVGTRIDLIRLDRVTPLAAPLF
LEVGRVPVQGAAEERLLAEESARLLADAGLTA
>gi|56697931|ref|YP_168302.1| hypothetical protein SPO3099 [Ruegeria pomeroyi DSS-3]
MNGYDFTFAGARLTALGSGALWWRERRLLCVSDLHLGKSERIARRGGTPLPPYEVADTLDRLSADLERTA
PETVICLGDSFDDAEAARALPEPARLRIATLQAGLRWVWIEGNHDPGPVNIGGTHLRELTLGPLLFRHIA
QDGAEGEISGHYHPKAALRLRGRSLSRPAFLLDQDRIVMPAYGTYTGGLRSDAPVLARLMRPGALAIVTG
PSPVAVPMPR
>gi|56697932|ref|YP_168303.1| hypothetical protein SPO3100 [Ruegeria pomeroyi DSS-3]
MIATLRSYLSADKRGLVGPAFLFLSLLASISDPFGGYGMTFLRRFLFWVLVLGVAGGIAFLSHRMVERHL
SGAPLLGKDLLIVLLVTLSFTPSLWVLIFLFAAPSTGTAPDMWSMARYGTIFASGLIVLRRGVFGQSVPE
EESLQPRIYKRLPEGFSEQILRLTVRDHSVDVVTDKGVHTIRSRFGDAIDEMVPISGHCTHRSHWVTDTA
IESVERSGGKIHLRLSNGDLIPVSRKYRPALEEAGIV
>gi|56697933|ref|YP_168304.1| folD bifunctional protein [Ruegeria pomeroyi DSS-3]
MAATVIDGKAFAARIRGQVAEHVAELKAGHGITPGLAVVLVGEDPASQVYVRSKGKQTVEVGMNSYEHKL
DADTSEADLLALIDRLNGDPDVHGILVQLPLPGHLDEDLVINAIDPAKDVDGFHISNVGLLGTGQKSMVP
CTPLGCLMMLRDHHGSLSGMDAVVIGRSNIVGKPMAQLLLGDSCTVTIAHSRTKDLADVVRRADIVVAAV
GRPEMVPGDWIKPGATVIDVGINRIERDGKTRLVGDVHYDSCAQVAGAITPVPGGVGPMTIACLLANTLT
ACTRANKLTEPDGLTP
>gi|56697934|ref|YP_168305.1| chorismate mutase family protein [Ruegeria pomeroyi DSS-3]
MSTSIPPQDCTDMTSLRAQIDRLDRELISLLAARAGYIDRAVELKQGNGWPARIPERVEEVVMNARAAAE
GQGLDPGLIEDLWRQLVDWSIAREARVIREV
>gi|56697935|ref|YP_168306.1| formate--tetrahydrofolate ligase [Ruegeria pomeroyi DSS-3]
MAYKSDIEIAREARKLPILEIGAKLGIAADELLPYGHDKAKVSQGFIDSVQDRADGRLILVTAINPTPAG
EGKTTTTVGLGDGLNRIGKNAMICIREASLGPNFGMKGGAAGGGYAQIVPMEEMNLHFTGDFHAITSAHS
LLSAMIDNHIYWGNEADIDTRRVVWRRVVDMNDRALRQITCSLGGVSNGFPREAGFDITVASEVMAILCL
ARDLKDLEKRLGDIIVAYRRDKSPVYCRDIKAEGAMTVLLKDAMQPNLVQTLENNPAFVHGGPFANIAHG
CNSVIATKTALKVADYVVTEAGFGADLGAEKFMNIKCRKAGIAPSAVVLVATVRAMKMNGGVAKGDLGAE
NVAAVNKGCANLGRHIENVKSFGVPVVVAINHFVTDTDAEVQAVRDYCANHGVEAVLSRHWELGSEGSEA
LARKVVELAESGKANFAPIYPDDMSLFEKIETIAKRIYRADEVLADAKIRNQLKEWEEAGYRNLPVCMAK
TQYSFTTDPNRRGAPTGHSVPVREVRLSAGAGFIVVVCGEIMTMPGLPRKPAAETIRLNDAGQIEGLF
>gi|56697936|ref|YP_168307.1| MOSC domain-containing protein [Ruegeria pomeroyi DSS-3]
MMPVLEKSGHIGRVEWLGRVPAGGSLRAEPVDMLDLGFAGVTGERHEGVTRPSCVRVRNLYDRDTEIRNA
RQLTVLSAEEMAAIAAEMGLDRLDPAWLGASIVISGIPDFTHVPPSSRLQSGDGTTLTIDMENRPCVFPG
REVEADKPGHGAAFKPAAKDRRGVTAWVERPGALRLGDELTLFIPDQRPWAP
>gi|56697937|ref|YP_168308.1| ATP-dependent metalloprotease FtsH [Ruegeria pomeroyi DSS-3]
MSLGNARNIAFWVVLFLLILALFNLFSGSGGTLQSQEKTYSEFVSAVDEGNVTKVILDGEQIRYRTSDGR
DFVTIKPGDAEVTTLLIDKNIPVRAEKQQQSGFQSFIITLLPFLLLIGVWVYFMNRMQGGGRGGAMGFGK
SKAKMLTEKHGRVTFDDVAGIDEAKEELEEIVEFLRNPQKFSRLGGKIPKGALLVGPPGTGKTLLARAIA
GEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIVFIDEIDAVGRHRGAGYGGGNDEREQTLN
QLLVEMDGFEANEGVIILAATNRKDVLDPALLRPGRFDRNVTVGNPDIKGREKILGVHARKTPLGPDVDL
RIIARGTPGFSGADLANLVNEAALMAARVGRRFVTMEDFENAKDKVMMGAERRSMVLTQDQKEKTAYHEA
GHAVVGLALPMCDPVYKATIIPRGGALGMVVSLPEMDRLNWHRDECQQKLAMTMAGKAAEILKYGEDHVS
NGPAGDIQQASQLARAMVMRWGMSDKVGNIDYAEAHEGYSGNTAGFSVSAHTKELIEEEVKRFIQQGYDQ
AHAILTERREDWDRLAQGLLEYETLTGEEIKRVMKGEPPHAGDDEDQGTDQGNAASVTAIPKTKPKAPPA
GGMEPEPTA
>gi|56697938|ref|YP_168309.1| PP-loop family protein [Ruegeria pomeroyi DSS-3]
MLLTIGAQDLVNHLRAQFSAQPPRRLGVAVSGGGDSVALMHLLARCFPRGEVKLCVATVDHGLRSESASE
AALVARQAAGLGLPHETLLWTGWTGEGNLQDQARRARYGLLTDWALRNRVTTVALAHTADDQAETLLMRL
GRSAGVSGLAAMAPRRMQDGVVLVRPLLGITRDALRDFLRAEGIAWAEDPSNEDIRYDRIKARQALAGLA
PMGIDAQRLAEVAANMARAREALDWYTFLAARDLTRIDGGDVLLEPRGFRTLPDEIARRLLLHIVGWIGG
GEYPPRRVAVAEALSALRHERSSQLGGCLILGQGRRIRFCREWKAVETLTVPQGALWDGRWVLRGPVVKD
GELRALGAAGLKLCPDWRQTGRPYAALIASPSVWSGADLVAAPLAGLANGWTAELESGEEDFYASLLSH
>gi|56697939|ref|YP_168310.1| hypothetical protein SPO3107 [Ruegeria pomeroyi DSS-3]
MRVAGVVLAVSLTFAGQAPAQDQQTLADIRQELTVLHVEVQRLKREFSTTGSPTPSTAGGTVLERVDAIE
SELQRLTRLTEQLNARIDRVVADGSNRVGDLEFRLCELEPACDISKLSQGTTLGGDVPVTPAATPQPSQP
QTELAVGERAEFDSATQALEAGDYAKAADLFTQFDASYPGSPLAAEAHLKRGKALDGLGDTREAARAYLA
SFTGDGSGPFSAEALYKLGSALGRLGQTSQACVTLGEVSVRFPSAASVADAHREMASLGCS
>gi|56697940|ref|YP_168311.1| peptidoglycan-associated lipoprotein [Ruegeria pomeroyi DSS-3]
MNKQRKSIGEAPEMNVLSKLAAMGALVALAACTNPEDLGDGNSVDLNGAGAGSGLVGDPTSPAYFSQAIG
DRVLFAVDQSTLGPEAQATLGAQAQWLLTNTDYTATIEGHADEQGTREYNLALGARRANAAREFLISRGV
AGSRLKTVSYGKERPIEICSDEACYSKNRRAVTVLTTDLTG
>gi|56697941|ref|YP_168312.1| translocation protein TolB [Ruegeria pomeroyi DSS-3]
MMRFLTSLVLGAALLAGAAQAQNQPLRITIDEGIIEPLPYAAPNFVPDSPAAAEYAAEIARVLAADLTGS
GLFREIPSTAYISQVTSFDAPVQFADWKAINAQALITGAVSVSGNRLTVRFRLWDVFAGAELGSGLQFAG
TTDGWRRMSHKVADAVYSRITGESGYFDSRVAFVSESGPKDQRRKRLAIMDYDGANVQYLTDSSSIVLAP
RFSPTGDRVLYTSYQGGFPRIHILDVGQVQQRVLQSQDGTMSFAPRFSPDGQTVLFSLAQGGNTDLYAMN
IASGQSTRLTSAPSIETAPSYAPDGSRIVFESDRSGTPQLYVMSAAGGEATRISFGQGRYGTPVWSPRGD
LIAFTKQSKGRFHIGVMRADGSEERLLTASFLDEGPTWSPNGRVIMFTRETQGASGRAALYSVDISGRNL
RPVRTPDGGSDPSWSPLQK
>gi|56697942|ref|YP_168313.1| TonB domain-containing protein [Ruegeria pomeroyi DSS-3]
MQTGTKISALAHVTLVTWAFLGGAFRSDPLPFEVQEVSVISAEEFAALSAPREAPEITPQPVEPEQPTAP
IEQPAPLEPAPEPEPARPEPQPVTQPEPEPAPEPVQPTPEPQVPSEAPSLERPEPETVLLPEPPGKRPKP
RPVERVAPEPVAAPPPDARPDPVETPPVSAEEGAEAPQPEQPATAPEEATDRIEPETDPQADVAPSRSPR
PKTRPQQPTQTAETKPEAKPEAKPEAKPATGGQTDDSRNAVNEALAQALAASEEPAAAPAPSGPPLTSGE
KESLRVAVSQCWNVGSLSSEALRTTVVVSVRMNADGTPDIGSIRLTDSSGGSTGAAKQAYEAARRAIIRC
GAKGYNLPSEKYDHWRDIEMTFNPERMRIK
>gi|56697943|ref|YP_168314.1| biopolymer ExbD/TolR family transporter [Ruegeria pomeroyi DSS-3]
MGAALQQTEGGAGGRRRGRRRGRARPMSEINVTPFVDVMLVLLIIFMVAAPLMTVGVPVELPKTAAGALP
SDDEEPLTVTVTAEGEVQIQTTAVPRDELVARLRAIAAERSSDRVYLRADGGIPYAQVMQVMGALNAGGF
SNVGLVTDTGGPRLDSGGE
>gi|56697944|ref|YP_168315.1| proton transporter TolQ [Ruegeria pomeroyi DSS-3]
METEALALAQEIDFSMWGLFARATLTVKLVMLLLVLASFWAWAIIIQKHILYRATRREADRFDQSFWSGE
PLDELFEQIGAQPEGSSEKIFAAGMVEWRRSHRNDGGLIAGAQARIDRSMDVAIAKEAEGLQRGLPVLAT
VGSTAPFVGLFGTVWGIMTAFIEIAEQQNTNLAVVAPGIAEALLATGLGLLAAIPAVIFYNKLSADSDRI
VAGYEAFADEFATILSRQLDS
>gi|56697945|ref|YP_168316.1| hypothetical protein SPO3113 [Ruegeria pomeroyi DSS-3]
MTHVFPVRVYYEDTDMGGIVYHANYLRYIERARSDWVRNLGNDQNAMREAGLVWVVRKIEAEYLAPARFE
DDLTVLTEVVALSGARLTMAQSVRRAEAEIFRATVTAVCMNGEGRPVRLPAEIRALL
>gi|56697946|ref|YP_168317.1| hypothetical protein SPO3114 [Ruegeria pomeroyi DSS-3]
MGKGALPPRTKFVEFCRLPRNTFRKVKGQGRNSAAAGVDLGAGFDKKRGAFFAEPPAMLTPETIETLFTR
DDGSFQFARWGRPVVPIVFGVEDETLSVVKGAFEAVMALAGHKMAETDPELGANCMVFFFRDWEELLAVP
DLDRLIPDLAALVARLVGAGANQYRAFRFDEAGAIRAAFVFVRMDAQMAAQPAETLALAQVVQVMLLWSE
AAFRAQSPLALAGDATILRPEIAGLIRAAYDPILPGAARDASHALRLYARMERPQ
>gi|56697947|ref|YP_168318.1| Holliday junction DNA helicase RuvB [Ruegeria pomeroyi DSS-3]
MTDADPTLRPDPLPEDNDRALRPQALDEFIGQAEARANLRIFVQSARQRGEAMDHTLFHGPPGLGKTTLA
QIMARELGVNFRMTSGPVLAKAGDLAAILTNLEARDVLFIDEIHRLNPAVEEVLYPAMEDFELDLVIGDG
PAARTVRIELQPFTLVGATTRMGLLTTPLRDRFGIPTRLLFYTVDELFEIVSRNARKLGAPAEEAGAREI
ARRARGTPRIAGRLLRRVVDFAVVEGDGRITRELADHALTRLGVDQLGLDGADRRYLRLIAENYSGGPVG
IETLSAALSESRDSLEEVIEPYLLQQGLIQRTPRGRMLAQKAWTHLGLDAPRPPGQSDLFG
>gi|56697949|ref|YP_168319.1| Holliday junction DNA helicase RuvA [Ruegeria pomeroyi DSS-3]
MIGKLTGRLDYRSTDHVLIDVRGVGYIVYCSDRTLAALPGVGEVVALYTDMVVREDLMQLFGFMSLAEKE
WHRLLCSVQGVGAKVSLAILGALGPDGVSRAIALGDWASVKSAKGVGPKTAQRIVLDLKDKAPGVMAMGG
TVAQAMEGAVEVVEVIEPAAPAPRKAAPPGGAGAATAGALSALSNLGYGPSDAAAAVAQAAAEAPEAGET
DLIRAALRLLAPKT
>gi|56697948|ref|YP_168320.1| Holliday junction resolvase [Ruegeria pomeroyi DSS-3]
MRILGIDPGLRTLGWGVIEQRGSRLSHVANGLCHSDGDDLGERLLSLHNQIVEVIEEYRPDQAAIEQTFV
NKDGAGTLKLGQARGVALLTLAQAGLPVGEYAPNRVKKTVVGVGHAEKEQVIHMVKLQLPGCLPKGADAA
DALAIAICHAYYGSAQALSQREVRA
>gi|56697950|ref|YP_168321.1| hypothetical protein SPO3118 [Ruegeria pomeroyi DSS-3]
MAALDTTRFAQGSFGLVGRIAALGSIIANAFVAWNDARATRNALTALSDRELEDIGMSRADIDAVVAGKT
AY
>gi|56697951|ref|YP_168322.1| hypothetical protein SPO3119 [Ruegeria pomeroyi DSS-3]
MEAAMVDNNVDFDQRIRRLNKKHEALSRGYTARMRKDGLIELKPRRGGGRMPLRALVLLCGAVLAFKAFL
LASLGPDSYDARLSRLAEGTPVEQAGAWVMQADPASLFLAEQIGPILR
>gi|56697952|ref|YP_168323.1| ribosomal protein L11 methyltransferase, putative [Ruegeria pomeroyi DSS-3]
MPTFTALTTLTGKSQAEALGEAMETLTPEPTGIGVFELEDGSGLWEVGGYFTETPDDTALALLAAVHGAQ
PFVVSELPETDWVAHVKRELSPVEAGRFFVYGSHDADKVPEGRIPLLIEASMAFGTGHHGTTLGCLRALD
GLIELGFSAAKVADIGCGTAVLAMAAARVWQGDFLASDIDAVAVEVAEANLKANGMAGAVTCLEAAGFDH
PDLAAQAPYDLIFANILKGPLVALAPDVASHLRPGGYAILSGILNEQADDVIAVYAQAGTNLVDRGVIGD
WTTLLLRKIDAF
>gi|56697953|ref|YP_168324.1| MATE efflux family protein [Ruegeria pomeroyi DSS-3]
MERRGRFLSGSTMGHVVRMTLTGAMGITFVFLVDAANLYWISRLGEPRLMAAIGFSFAIQFLSVSVGIGL
MIGAVALISRGIGQGRRGLARRHATSAMMIAFAVQSLAGLLIFLFRHQIVALSGATGETAILAARYLALT
VPSLGVMAAGMVANGALRAEGDGVRSMSVTLTSGGVAMVIDPFLIYGLGMGLDGAALGVVLSRFVMLAMA
LRFATGPHDLLARPRRRDVMGTLRPFMAIAVAAILTQLAAPVGNYILTSVMAQFGDQAMAGWAVVGRLTV
VAFGGIFSLAGAIGGIFGQNFGAGEHARLRSTYRDAVLFGLGYTLVMWAVLSLAAPGIGAVFDLQGPALD
VLHAFTHVGAGGFVFAALLFVSNAAFNAMGKARRATLTNWLRDGALTLPAALWLAGAYGAEGVIYAQALC
SLVVGLGAAFWGWRFVVSLGRRHLPRLDLAPPRPYAHPDRYRRR
>gi|56697954|ref|YP_168325.1| hypothetical protein SPO3122 [Ruegeria pomeroyi DSS-3]
MFRPVPLSQAASLPFWRRPITLLFVMAIAMPIAFNAWSALLNNFVIEVANFDGADIGLLHTVREIPGFLA
VGVIAVILVMREQVLGMISLVLLGLATAVTAWFPSLGGLLMVTLFSSIGFHYYETVNQSLQLQWLSKERA
PQMLGWLVATGSASTLVIYGLIVLTWDRFELSYNTVFMAAGGLTVVIALFCLLAYPQFDAPTPQTKKLIL
RRRYWLYYALQFMAGARRQIFVVFAGFMMVEKFGFDVHELTGLYLINLVINMGVAPLLGRAVARFGERRT
LVFEYSGLALVFAAYGGIYWFGWGVTLAAILYVIDHILFALALALKTYFQKIADPADIAPTAAVAFTINH
IAAVFLPVLLGLLWVVSPSAVFALAACMALISLGLSLLIPRHPEPGNETVLSKYMPAPAE
>gi|56697955|ref|YP_168326.1| YeeE/YedE family protein [Ruegeria pomeroyi DSS-3]
MDLVSLVERIGEAPTAALFGLITGITFGVAAQRSRFCLRAATVEFARGRMEDKVAVWLLTFSTALVWVQA
AQLMGLMNGADARMMAVPGSWSGAIIGGLMFGAGMVLARGCSGRLLVLAATGNLRSVVSGLIFAVVAQMS
LSGLLSPLRDKLAALWITEGGRNMNLLSTFGLPEYGGLVLGLVCAVLALVLARRHRIGAARLVFASGVGF
AVALGWVLTYALSQVAFEPVQIESATFTGPSAHTLMFFLDRNAVLEFDVGLVPGVFIGAMIAAALAGEMK
IQAFDGPVTMRKAMIGAALMGFGGMLAGGCAIGAGVTGGSIFVGTAWAALFFMWVGAMATDFLIDQRAAS
PRAA
>gi|56697956|ref|YP_168327.1| hypothetical protein SPO3124 [Ruegeria pomeroyi DSS-3]
MRRRLHEIRRTPDMTLKPSLALAALSLAIATSALAGAAIQTGDTAKGAVLTDGNGLSLYTFDKDTPAVSN
CYDDCAAKWPPLEAANTARPQGEFGIVLRADGSRQWTHKGMPLYTWIKDAKAGDISGDGVKGVWHLARP
>gi|56697957|ref|YP_168328.1| ECF subfamily RNA polymerase sigma factor [Ruegeria pomeroyi DSS-3]
MAILDQIEALIPDLRRYAHALMRDREAGDDLVQDCLERAVAGLGGRRPDGALRAWLFRILINRHRDLRRR
AARAGHLVAVEDLVVEPARPAGQDSHMALRETEAAIARLPEDQRRALLLVALEGASFDEAAAALDIPKGT
LMSRLARARANLRTMTGRGDPATGPAQRGKGA
>gi|56697958|ref|YP_168329.1| sigma factor regulator PrtR, putative [Ruegeria pomeroyi DSS-3]
MTQDPLSDEELIAYFEDALPPAERAALEARLAQDPRAQALLLDWARQNEDIRALYGDMQEDVVPARLRDA
LCAPRAPLLRQALAASAVLMLGLVVGWAGHARLGDPSPAPALADAALTAHRTFVVEVVHPVEVPASQRDH
MNSWMSKRIGAPVSPPDLSASGFALMGGRILPAGKWVAGLYMYENSEGQRITLYVAPQEEGNSTLRFAGD
RQTESLHWAKGGLGFVLTGALAREDLRQMATSAYEQLL
>gi|56697959|ref|YP_168330.1| primosome assembly protein PriA [Ruegeria pomeroyi DSS-3]
MDTGGLDSGGFFEEGALVSVLTTQPLDRTLDYKAPEGGCFVGAFVEVPLGPRKVLGVVWGPGRGDFDRSR
IRSVLRVLDVAPMREEMRSFLGRTADYTLTPMPAMLRLATRAPGLGDPPSMRKVYRLGGVDPDRMTDARA
RVLEVLRDYGGLAFTLKELAEMAGVTASVVKGLVKQGAVREEDSPRDLPYPHLDPDLPGKALTEDQVRAA
DSLRAGLRSGRYGTTLLKGVTGAGKTEVYLEAVAEALRMGRQALVLLPEIALTAEFLSRVEARFGARPAE
WHSGATMTERRRVWRMVGQGAAQLVVGARSALFLPFRDLGLIIVDEEHDTSYKQEDGVLYNARDMAVLRA
AICGARVVLASATPSLESWANADAGKYERVELTSRFGPAVLPQMQAIDMRAETMQPSSWISPNLRRAVSD
RLAKGEQSLLFLNRRGYAPVTLCRACGQQIGCDHCDARMVEHRFLKRLMCHQCGETKPIPETCPHCGAEG
RLAPVGPGIERLAEEATASFPEARIAVLSSDMFGTARALKERIEAIAAGEADIVIGTQLVAKGHNFPLLT
LVGVIDADLGLQGSDLRAAERTFQLMRQVAGRAGRAEKPGQALLQTYQPEHPVIRAILAGDEERFWRAEA
AERQAAGVPPYGRMAGIILSGPEAGPVFDLGTAMARNDAALRQIGAQVFGPAPAPIARVRGRHRVRLLVK
APKGAPLQEAIARWIAPLRLKGDLRLSVDIDPQSFL
>gi|56697960|ref|YP_168331.1| putative translaldolase [Ruegeria pomeroyi DSS-3]
MKFFVDTAEIDAIAELNDLGMVDGVTTNPSLIKKSGRDIIEVTREICAMVDGPVSAEVTATDAETMIAEG
RKLVEIAGNIAVKVPLTWDGLKACKVLSDDGHMVNVTLCFSANQALLAAKAGATFISPFIGRLDDINLDG
MELIEDIRTIYDNYGFETQILAASIRSVNHILDSARIGADVITAPPAVIKAMVNHPLTDKGLDAFLADIK
AADIKIL
>gi|56697961|ref|YP_168332.1| hypothetical protein SPO3129 [Ruegeria pomeroyi DSS-3]
MSSSPKLDETLREAIIAKPQAVLDDKDIMHALVAANERAMGGNVVDLRGIAMERLEARLDRLEDTHRSVI
AAAYENLAGTNQVQRAVLRLLDPVDFETFLRDLGTEVAEVLRVDAIRLVLESSQAERGASLERLDDVLTV
AQPGFVDSYLTAGRNAMPRQVTLRQLQQATPQVYGRRADWIRSEACLKLDLGPGRLPGMLAMGAEDPHQF
TPQLGTDLLAFFAGVFERTMRRWLS
>gi|56697962|ref|YP_168333.1| site-specific tyrosine recombinase XerC [Ruegeria pomeroyi DSS-3]
MSLISPACRDALQLWLDTQRALAGRAENTITAYRTDVVEFMSFMTLHFGATQGLAPLARIGVPDMRAWMA
QMRADGIGARSLARKLSAVKSFYRWLAEREGFEPTAVLSTRAPKFQRKLPRPLAEDAARAMIDTVELQSS
KPWIAARDMAVVTLLYGCGLRISEALSLTGRAAPLPATLRIRGKGGKERLVPVIPVARAAVDTYLRLCPW
PVEPETPLFRGARGGPLNARSIQAVMAKARMQLGLPATATPHAMRHSFATHLLEAGGDLRAIQELLGHAS
LSTTQAYTAVDTAHLMDVYNRSHPKA
>gi|56697963|ref|YP_168334.1| phosphatidylcholine synthase [Ruegeria pomeroyi DSS-3]
MTPQFRALLVHLFTATGAVFAMLAMLAAVDAKWDLMFLWLVVAFFVDGLDGPMARRYHVKTYAPEFDGVL
LDLIIDYLTYVFIPAFALFKSGLMDGWTGWLAIIIITFASAMYFADTRMKTKDNSFSGFPGCWNMVVLVI
FALEPNFWVSLVLVTVLAVSMFLPLKFVHPVRTERWRAITLPMALAWTFFAGWAAWVGFHPESWAHWGLV
VTSLYLIFAGIAQMVIPEKDTASPF
>gi|56697964|ref|YP_168335.1| hypothetical protein SPO3132 [Ruegeria pomeroyi DSS-3]
MSETRDCPVLRGYAAAAEALYAVWEGLSSEAVLAPVLADLPAEPGRCLDLGAGSGRDAAWLSGRAHRVWA
AEPVAEFRAAGRRLHAAAAITWVDDSLPDLARVRALGLRFDLILAIGVFHHLTPTAQQQGLSAALALLSA
RGRMILSLRHGPTPPTRPGHPVDTDALVATALEQGVQVRRLIRDHPSLLPDNRAAGVRRDWLCLSRE
>gi|56697965|ref|YP_168336.1| hypothetical protein SPO3133 [Ruegeria pomeroyi DSS-3]
MTDRAAQKQAVQDKLMSLEAAELAAAKAHYEAFLKEAQLGDREVHDKDDLVASRESRDLAAAFDAPVQAH
HAKIDVIENTDFALTDTVGPGAVVSFGGRNFVVCVSTTRFEVDGKTYMGISMQSPIYLAMKDLRAGESFA
HNGQDFEIEDIM
>gi|56697966|ref|YP_168337.1| methylated-DNA--protein-cysteine methyltransferase [Ruegeria pomeroyi DSS-3]
MPSLTVDTPTGAFVLTEEEGAITRATWGRGGSDHTPLLDRAAEQLTEYFRGEREVFDLPLRVRGSVLQRA
VCDAIAAIPFGYTRTYGEIARDLGSSAQAVGQCCGGNPIPVIIPCHRVMGARGLTGFSGQGGVETKVALL
RLEGAAGLLI
>gi|56697967|ref|YP_168338.1| T4 family peptidase [Ruegeria pomeroyi DSS-3]
MPRARDLGLAIGRFPPGPLNAITDVGQVAVGHVTLIEGDRTRTGVTAILPHPGNVFADRPRAGLSVLNGF
GKFAGATQVQELGEIETPILLTNTLAVGRAVEALVRYTLAQPGNGHVTSINAVVGETNDGRLNDIRAARP
TVAEMLAALANARPGPVAEGAVGAGTGTISFGLKGGIGTASRRVGDYMLGVLVQSNFGGTLRVDGRPVAG
VPEADADGSIVLVIATDAPLSSRNLTRLATRSFAGLARIGSSLSNGSGDYALAFSVGPGEVLGNDACSPL
FEAVIEAAEEAILNALLMAGDMEGYDARHDRPYRVAGLVL
>gi|56697968|ref|YP_168339.1| isoleucyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
MCADTTAETPEYKDTLNLPKTDFPMRAGLPAREPQWLERWEKIGVYDRLREKQGRAPFTLHDGPPYANGH
LHIGHALNKTIKDMIVRSHQMMGFDARYVPGWDCHGLPIEWKIEEQYRKKGKSKDDVNVVEFRQECRRFA
EGWIDIQREEFKRLGITGNWADPYVTMDYHAEAVIADEFMKFLMNGTLYQGSKPVMWSPIEQTALAEAEV
EYHDKESFTIWVKFRAVNSGDLDGAQVVIWTTTPWTIPSNKAVVYGKDIAYGLYEITGTPEECWASVGDK
YILADKLADDVMRRARLDPDMYRRVGDVDPSQIGGLTHPLHGAEGGNGEWDDIRDFRAAEFVTDTEGTGF
VHCAPSHGMEEFELYRDLGMLEQVITYNVMDDGSFRADLPFFGGKYILSRKGGEGDANKTVIDKLVEVGG
LLARGKIKHSYPHSWRSKAPIIYRNTPQWFASVDRPVNDGQDSYGKTIRERALTSIDQLVKFTPQTGRNR
LYSMIEARPDWVLSRQRAWGVPLTCFTRKGALPTDADFLLRDPAVNARIFAAFEAEGADCWYAEGAKERF
LGNDYKADEWDQVFDVLDVWFDSGSTHAFVLRDREDGTADGIADVYMEGTDQHRGWFHSSLLQACGTLGR
APYRNVVTHGFTLDEKGMKMSKSLGNTIVPDEVVKQYGADILRLWVAQTDYTADQRIGPEILKGVADSYR
RLRNTMRFMLGSLSDFTEADRIEDPAEMPPLERWVLSRMAELDEQVRKGYAGFDFQGVYSAVFNFATVDL
SAFYFDIRKDVLYCDGDTTRRRAARTVLDLLFHRLTTWLAPILVFTMEEVWLERYPGEGSSVHLVDFPET
PASWRNPQNESNVARVRRVRRVVTAALEIQRRDKVIGSSLEAAPVVHVEDAETRALLAQIDIDDLCITSG
LTVSADPAPAEAFRLPEIEGVGVVFEMAEGEKCQRCWKILPDVGRHAHAGVCGRCDAALG
>gi|56697969|ref|YP_168340.1| hypothetical protein SPO3137 [Ruegeria pomeroyi DSS-3]
MQSHSRLRIPRGNQLSKTSSIMNKPLLSLSALALMTTLAACNEPATPVGHTTLSLSDTVQLSAAGKTPAP
ETITPVRITFPDSRSYSAVPPAFHPKTCQLSSSHFTAEVQVPSEVNLPSYGTKTPPMRVRCTSDQFEFDE
TVKPVNLTQQAYSTAAAAHILVGYGLIGAAVTASQASQRDKSQDVYGYPLKIELQ
>gi|56697970|ref|YP_168341.1| hypothetical protein SPO3138 [Ruegeria pomeroyi DSS-3]
MTEHGHSPQEVSQRIGAPPGRGVLRDVVYGGIDGSVTTFAIVAGVAGAGLSPFVIVALGLANVLADGFSM
AAGNYSGTKADLDNLHRLRAIEERHIAHYPEGERLEVREILSQKGLSGEVLDQATDAITADRENWIALMI
DGEYGLGGVDPHPMRAAIATFLAFLVAGMIPLVPFLLGLAEAFTVSAWMTGAVFFAIGALKSRWSLAPWW
RSGLETLAIGGTAAAIAYGVGTLFQG
>gi|56697971|ref|YP_168342.1| hypothetical protein SPO3139 [Ruegeria pomeroyi DSS-3]
MPSPLPLFQITPAQIDHVVRVFYARIRTHAELGPVFAAHVRDWPAHEARIAAFWRNAILKERCYDGNPMR
VHVSRPDIRPDHFPLWLALFHEVLTQELAAETAARWGALADRIGHGLKMGLTSMRQKPDEVPLFL
>gi|56697972|ref|YP_168343.1| hypothetical protein SPO3140 [Ruegeria pomeroyi DSS-3]
METVMTQGPVLFDLKDEKTPPPAVVEAPPVPDTDRPQGAAMLAAARVAARRPSRLARWFWGLAAALLGAV
ISVAAWDFVTGLMERVPVLGWVMTALLAGFVLVALLIALRELAAIGRLGRVDGLRRAADAALAENDLAQA
RAVCRKLDTFYRGREETRWGRERLAERAGEQFEAHDLLALAEDSLLAPLDAEAQREVEAAARRVATVTAL
VPLALADVVAALASSLRMIRRVAEIYGGRSGVLGSWRLTRAVMAHLVATGAVAVGDDLLETVLGGSVLSK
LSRRFGEGLINGALTARVGVAAMEVCRPLPFSARRRPSVRGVVRRALTGIVGKTSG
>gi|56697973|ref|YP_168344.1| acetyltransferase [Ruegeria pomeroyi DSS-3]
MSAALRPARPGDAEPTGDILYRFAQDTPWMPKLYQRDETVGFCGVMIARGWVTVVVLGGQVAGFIARDGQ
EICSLYLANAAQGQGLGTALLADAMGQSDRLELWTFQRNTGAQRFYARHGFVEAARTDGAGNEERLPDIR
YEWRRS
>gi|56697974|ref|YP_168345.1| hypothetical protein SPO3142 [Ruegeria pomeroyi DSS-3]
MVITTIADRVMRGVETVSDTLSEALFEPVIRLGVTGLARSGKTVFITSLVANLLDRGRMPGLVAAQEGRI
EAAFLQPQPDDTVPRFDYEAHLAALTGPAPHWPDSTRAVSELRLSLRVRPGGLLGGLQGPRTVHLDIVDY
PGEWLLDLGLMDKSFEDWSAGVLARIGPRPQAAAYLAALEPVDPTTRHDEPQAQELARAFTAYLEAARGA
GFSDCTPGRFLLPGDLAGSPVLTFAPLPVTGAAPRRSLHREMARRFEAYKAQVVRPFFRDHFARIDRQVV
LVDALGAIHKGPQAVEDMRLAMADILGAFRPGRNAWLNRLLLGRRVDRILFAATKADHLHHKQHPQLTAI
IEALTREARDRAQFAGAETAALALAALRVTTEEMRAHDGRDLPCVRGSLLEDGRQAAFYPGALPEEPGQL
LSPARAGAETWLGAGFKAMSFAPAPLQLKPGDGPPHIRLDRAAQFLFGDRL
>gi|56697975|ref|YP_168346.1| tRNA pseudouridine synthase A [Ruegeria pomeroyi DSS-3]
MPRYALKVEYLGTPFAGWQRQKDLPSVQGAIETALARLEPGPHTIAAAGRTDAGVHGLGQVAHCDLTRDW
DPFRLSEALNYHLKPQPVAITAAARVAEDWHARFSATERQYLFRLLMRRAPATHDAGLVWQVGHRLDARA
MQAAADLLLGRHDFTTFRSSICQAASPVKTLDELRVEAVESFSGPEIRFHVRARSFLHNQVRSFVGTLER
VGAGAWAPEDVRSALEARDRAACGPVCPPQGLYLARVGYPEPVFAADRSAAS
>gi|56697976|ref|YP_168347.1| hypothetical protein SPO3144 [Ruegeria pomeroyi DSS-3]
MQREQDLYPPLKAMFERQGYVVKGEVGAADLVARRGDEPPVIVEMKLRFSLSLFHQAVARLALSDSVYIA
VPRPSGRTARRALRDNLALCRRLGLGLITLRADGRVEVQCDPGPYRPRKSKAREGRLLREFDRLEGDPNA
GGATRHGIVTAYRQDALRCAAWLAEQGASRGAVVARATGVAAATRLMRDNHYGWFERAEKGVYTLTEAGR
AGLVHWAYSWDQEAADLSAAKTGSG
>gi|56697977|ref|YP_168348.1| GumN family protein [Ruegeria pomeroyi DSS-3]
MKTAGNCRSLVMFRVFVICLCLLAAGGAAARCTGTDMRDRLTPEAEARLTREIKQVPFAYGNHWVATKGN
RRIHVIGTQHTGDSRMRAAMRNLTPVIRSADAVLLEVTQQKLATLDTVLRSTPGLLTIPKGPGLDTMMRA
EDWRLLSVRMAMHGVDERVLARMQPWFISMSLSTSGCGGRGLFAYRGLDDRIEKIAIRAKVPIGSLENVG
DGMRALSAIPIRDQIQLLLLDLKSEVNYDDQVVTMANAYFEQRLAEAMLIESWTLYRDLKISRSEVTRLL
RQFDAHILDRRNRAWMPVILASDAPVLVVAVGAAHLPGKTGILNLLKRQGYSLSRADF
>gi|56697978|ref|YP_168349.1| GumN family protein [Ruegeria pomeroyi DSS-3]
MRVPMLRFLPALLLVLTPFTAQAACEGRDLRDDLSPEMRTEMEQAAAAIPFPEGNHWTATRDDTVLHLIG
TLHVNDARMEATAARLEPVIAGADAVWFELNTPDLAAFEREVMGNPKVALITEGPTLIELMSEEGWNRVA
RALAERNVPAWIGAKMQPWVLGSILSLPPCLLRDPKAKQGMDRRLAALADSHGLPQHSLETGAELLALFT
ATPIEQQAREMDMFSAMLGADADQLATLSAIYFEEQNGAFMEFSRHDAMTRSGLTPEAFDPLWDSFMLEL
VEGRNRNWMRHILEIRDQTAVIAVGAAHLPGDQGLLNLLSEAGYSLSRAEF
>gi|56697979|ref|YP_168350.1| putative manganese-dependent inorganic pyrophosphatase [Ruegeria pomeroyi DSS-3]
MTIQVFGHKSPDTDSTGSPIVWAWYLTEVAGQAAKPVLLGEPNTEAAFMLSRWGLDKPAIIADVEAGAPV
VIVDTNNPAELPASVNDADIRQIIDHHALIGGLKTKGPIDITLRPLACTATIMVDLMGDDAARMPEAIKG
AALTCILSDTLEFRSPTTTDHDRAVAEKLAADLGIDIPAYAAEMFAAKSDVSSFSDAELLRMDSKEYNVD
GKEFRVSVLETTAPKVLLDRKDSLMASMVDVAKEDGADQVLLFVIDILNEEATLLVPNDLVKTVAEKSFG
ASVSGDTVVLPGIMSRKKQIIPNLKV
>gi|56697980|ref|YP_168351.1| hypothetical protein SPO3148 [Ruegeria pomeroyi DSS-3]
MQILESSIIGLRSACYVLSSPDYQPTVTLFPMVHVGDESFFETVYRDALAHDFLLAEGVNSPVVKQLTRS
YRWMAFDRLGLVLQPSIKGRSGRAQIIHADLSAREFEEAWARLPLWLRLVAPAHSTGVGLHRFLTMSRDR
LVENRGMDELSSRDDLLGWSPDQEALMRVILDIRDERLCSVLLGLLEANREQDGTIAIVYGARHMRAVLR
LLVQQGSFRVRKADWMPVISL
>gi|56697981|ref|YP_168352.1| hypothetical protein SPO3149 [Ruegeria pomeroyi DSS-3]
MAPASILCCDTDNRRPQMKLTGGCYCGALRYEAEGEPMLKAQCHCRACQSYSGGAPNLFMVMPAAGFRYV
KGTPKSFRLEDRPDRVTRDFCATCGTGVASHRPGLPAVILKIGTLDDPALFKGPRAAVFAAEKQAFHIIP
EGVHAFDGLPPT
>gi|56697982|ref|YP_168353.1| AraC family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MDVLLLHPTPCQRSSLAIAEDMLDSANRVAALRGEAAPFRWRTLRPEAVGPGTPAPGLVVLPGLGLASAH
DLRAAMDSPAFATLSAALRHLAQPGTRIAGACTGVFALAAAGLLDGRRATTTWWLAPLLRAWFPKVRVEM
GEVLYSDGALVTAGASFAQIDLMLHLIETQAGYALAEDCRRFLLADSRPSQLPYLSVATLVAGDPALQRA
ELHLRRHIARQVPLAELAEAAGLGARTFARRLARVAGMTPGEFAQTLRVTEAIRLYRAGGLSLEQIAHRV
GYGDATALRRVMTRRTGRRLESFRT
>gi|56697983|ref|YP_168354.1| HAD family hydrolase [Ruegeria pomeroyi DSS-3]
MPGACGIYALATVSKPDPDMTQIITALAEISERYRALFVDLWGCVHNGVTAYPEAVAALQAYRAAGGIVV
LVTNSPKPRAGVATQLSQFKVPQDAYDTIATSGDSARSAMFRGAVGQKVYFMGEWERDAGFFEPLKLLDS
PVEITRVPLQEAEGIVCCGPFDPMADPAVNRPDFLYAKTKGMKLLCANPDIVVDRGEIREWCAGALARLY
TEMGGESLYFGKPHPPIYDLARRRLLSLGADIADSEILAIGDGIQTDIAGGQGEGIDSLFISGGLAASET
KTGHSPDPAALTAYLDRENRMPTYTIGQLR
>gi|56697984|ref|YP_168355.1| MaoC domain-containing protein [Ruegeria pomeroyi DSS-3]
MAGSDAKLLRRMDREGDMLDNLPRGTICIEDIEMGMTRYLRKQVTDEDIEMFAQVSTDRNPVHLDDEYAR
DTIFEGRIAHGMLTAGLISAVIGEQLPGHGTVYMGQSLKFLAPVRPGDTVYAEVKVIDIDFAKRRVKLDC
HCAVDGKKVLVGEAMVLAPSRKFD
>gi|56697985|ref|YP_168356.1| monooxygenase, putative [Ruegeria pomeroyi DSS-3]
MRAIVIGAGMGGLMTALALRQSGVFSAIEVYEQTRQPSTAGAGLNIPPNGARICRWLGVDLDGGDPKGPD
GAIDGGRAAILKSTRQFNTDGSVTERPFDHVTAVGDGAGFHHMHRLDLLMCLYKRVFEFGPDSGTPCPIS
VHMDSRLTGLEQSQGGVTAAFANGHTATGDILVGADGINSATLSLAWPSPRPRRWTEVTCFRGLIPRETV
AALRKPDGSPLDYNPIHSFSMDRHKTDRSGATTYWVRGGELLNVWIARYEPDSTAFEQEEGDWFPISREE
ITRDVGAAFAELPNRDDLVALAGAMVRPTKWGLYDRDALDSWVQGRICLLGDAAHPMLPTFGQGAAQAFE
DAAALGCAFALHRRDVATALLHYERVRHYRASRFQLGSKFAFDHLRPKDTEAQKALLEGLDERVTPAFSH
DKRGGENDAWIYAFDARNIGPTLPAKKWGPWDYREASKEDHAKATQSLWRPEVPADGARRVTRAEVARHN
TRDDCWIIVSGKVYDITAWAPHHPGGAGIARIYAGKEATAEFGDYHSAQAVAHMAHFCIGELVETSDDIQ
PPA
>gi|56697986|ref|YP_168357.1| riboflavin biosynthesis protein RibF [Ruegeria pomeroyi DSS-3]
MRIIRDYRFLEPADRGASVAIGNFDGVHIGHRSVIELARQAAPDVPLGVMTFEPHPREYFAPDSPPFRLM
RGPARAHRLEKLGVERLYELPFNAALAGLTPEGFARGVICDGLGLKHVVIGADFCFGKGRSGNAADMVRF
GQQMGFGVTIAPLLEQTERVISSTAIRTALSEGRPRDAAAMLGHWHRIEGEVIGGEQRGRELGFPTANMS
IDGLHPPRFGVYAVLVDVLDGPHKGSYHGAASVGVRPMFNGERPNIETFLFDFSGDLYGATLSVGLVEYL
RPEMTFDGLDALIAQMDADCARARDILAAP
>gi|56697987|ref|YP_168358.1| hypothetical protein SPO3155 [Ruegeria pomeroyi DSS-3]
MTDPIERNGLRPRFWERKPLARLNKTEWEALCDGCGKCCLNKLEDEDTGEVELTRVACRLLDDESCHCTQ
YPIRHQFVPDCIVLTPDNLDSHAYWMPRTCAYRLLWEGKPLYDWHPLISGDPESVHRAGVSVRGITVSEF
ETPEEDWEDHIIEEPI
>gi|56697988|ref|YP_168359.1| L-threonine aldolase, low-specificity, putative [Ruegeria pomeroyi DSS-3]
MFFASDNSGPVHPEILAGLTDANQGYAMAYGADTQMQAVQEKIRRIFEAPDAAVYLVATGTAANSLALAT
LSQPWQTIFCSPVAHIHEDECNAPEFYSGGAKLTLVPGGDRMTPEALRASITGEETRGVHGPQRGPVSIT
QVTERGGVYSIAELQALCAVAKAYGLPVHLDGARFANALVALNASPAEMTWKAGVDAVSFGGTKNGCMGV
EAVIFFDPKHAWEFELRRKRGAHLFSKHRYLSAQMLAYLSDDLWLRSARRANDNCARLAEGLRAAGAEFL
HEPQANIVFASFPRAIHRRLMGAGASYHLWGAELEGANEDEMLACRMVCDWSIGTDQIDRFLSLL
>gi|56697989|ref|YP_168360.1| alpha/beta fold family hydrolase [Ruegeria pomeroyi DSS-3]
MRAAQALPQTAHVSHFGHGPRLVLALHCTIAHSGAWKGLTRILGEEAQFTAPDMLSHGRSPDWDGQGCFQ
DRILGIARTCLTEAPMDVIGHSFGATVALRLAVEHPERVRSLTLIEPVFFAVARQDAPELIDSHASDAQP
YLDALAAGDHALAARLFNRMWSTADSPRWPDLPEATRAAMIRGIHVVPTMDAALFDDTAGLLAPGRLDRA
AMPVLLLRGALTHPVMQAISMGLQRRLPDAVEMVIEGAGHMLPITHPDETAAHIRALWSRTG
>gi|56697990|ref|YP_168361.1| 2-hydroxychromene-2-carboxylate isomerase [Ruegeria pomeroyi DSS-3]
MADIDYFFATLSPFSYLAGQRLEEIATRHGATIAYKPVDIMALFARTGGVPPKDRHPSRIEYRAQELQRQ
TRKTGLPLNMKPAFWPTNAAPSSYAIIAAGRAGGGDLGALCHGILRACWAEERDIAQDEVIRDCLAQAGF
DPGLADSGLLAGAETYSANLEEAVERGVFGAPFYITADGQRFWGQDRLDDLDAHLAEMKG
>gi|56697991|ref|YP_168362.1| ribose-phosphate pyrophosphokinase [Ruegeria pomeroyi DSS-3]
MPSLTEPKLIAGNANLPLARSIARRMSLYRGVDQGLVDARVERFNDGEIFVEVFENVRGEDMFIIQPTSN
PANDNLMELLIIADALRRSSASRITAVIPYFGYARQDRRTKARTPISAKLVANMLTGAGIERILTMDLHA
AQIQGFFDIPVDNLYASPIFALDVQTQFKQQMSDLMVVSPDVGGVARARELAKRINAPLSIVDKRREKPG
EVAEMTVIGDVTDKICLIVDDICDTAGTLCKAAQVLLDNGAREVHSYISHGVMSGPAVERVSNSVMKSLV
ITDSIQPTPEILAAPNIRVVPTAPIFTQAILNIWNGTSVSSLFEDKTLRPIYESLYHMD
>gi|56697992|ref|YP_168363.1| hypothetical protein SPO3160 [Ruegeria pomeroyi DSS-3]
MCGFRAMKLFSSHPVAIQQGDEAMFSDFENGGDMWTGSGSRERRKPVLFEQTFRSTPVVMVTISLWDVDT
SAAVRAEVKAENVTPEGFELVFRTWADTRVARLRLGWTAIGDMRNEDDWDVI
>gi|56697993|ref|YP_168364.1| F0F1 ATP synthase subunit epsilon [Ruegeria pomeroyi DSS-3]
MANTMQFDLVSPERLLASLQVSAVQIPGADGDMTAMPDHAPTITTLRPGVLKVEGPEGTSEYLVTGGFAQ
IGADSLSVLAEKAIPVTEVTRAHLDELIAEARSSHEAAKGQEHTSVVDDAAKLLADMEALGTHMGL
>gi|56697994|ref|YP_168365.1| F0F1 ATP synthase subunit beta [Ruegeria pomeroyi DSS-3]
MANAKGKVTQIIGAVVDVQFDDALPEILNALETENNGKRLVLEVAQHLGENTVRTIAMDATEGLVRGAVV
TDTGGPISVPVGAATLGRILNVIGEPVDEKGPVNATETRAIHQPAPSFDEQSTSSDILVTGIKVIDLLAP
YSKGGKIGLFGGAGVGKTVLIMELINNIAKVHSGYSVFAGVGERTREGNDLYHEMIESNVIKLENLEESQ
VALVYGQMNEPPGARARVALTGLTLAEQFRDQSGTDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPT
LATDMGAMQERITSTKAGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRAISELGIYPAVDPLDSS
SRILDPQVVGEEHYQVARDVQGILQRYKSLQDIIAILGMDELSEEDKLTVARARKIQRFLSQPFDVAKVF
TGSDGVQVPLEDTISSFKAVVAGEYDHLPEGAFYMVGGIDEVIAKAERMAAEAA
>gi|56697995|ref|YP_168366.1| F0F1 ATP synthase subunit gamma [Ruegeria pomeroyi DSS-3]
MPNLKDLKNRIASVKSTRKITKAMQMVAAAKLRRAQESAEAARPYAERFNAVMAGLAASVGGSDSAPLLL
RGTGSDQVHLLVVMTAERGLCGGFNSNIAKLARVRANELLAKGKTVKILTVGKKGRDAMKRDFAANMVGH
VDLSGIKALGYANAQDIARDVLGRFDAGEFDVATIFYAKFQNVVTQLPTAQQIIPAAFEAEGESDEVALF
DYEPSEEAILADLLPRGVATQIFSALLENGASEQGARMSAMDNATRNAGEMIDKLTIEFNRSRQAVITNE
LIEIISGAEAL
>gi|56697996|ref|YP_168367.1| F0F1 ATP synthase subunit alpha [Ruegeria pomeroyi DSS-3]
MGIQAAEISAILKDQIKNFGQEAEVAEIGRVLSVGDGIARVYGLDNVQAGEMVEFPGGIMGMALNLENDN
VGVVIFGSDRDIKEGDTVKRTNSIVDVPQGDELLGRVVDGLGNPIDGKGPINAKLRGVADVKAPGIIPRK
SVHEPMATGLKAVDSMIPIGRGQRELIIGDRQTGKTAIALDTILNQKSYNDAAGDDESKKLYCVYVAIGQ
KRSTVAQLVKKLEENGAMEYSIVVAATASDPAPMQFLAPYAATAMAEYFRDNGRHALIIYDDLSKQAVAY
RQMSLLLRRPPGREAYPGDVFYLHSRLLERSAKLNEDFGAGSLTALPVIETQGGDVSAFIPTNVISITDG
QIFLETELFYQGIRPAVNTGLSVSRVGSSAQTKAMSSVAGPVKLSLAQYREMAAFAQFGSDLDAATQQLL
NRGARLTELMKQPQYSPLTNAEIVCVIFAGTNGYLDKVALADVGRWEAGLLQHLRGKHAELLAWITNEDP
KIKDDAAGRVKAALDEYAATFA
>gi|56697997|ref|YP_168368.1| ATP synthase delta chain [Ruegeria pomeroyi DSS-3]
MSEPASISAGIAQRYATAIFAIAQDNNDLKGLETGINDLTAALGESADLRSLIASPLVSRAEQEAAITAV
AKKMKLNPVLANALSLMAQKRRLFVLPQLLTALRDALAEARGEVTAEVASAKALTKTQIEKLTKTLSEKV
GKSVTINATVDESLIGGLVVKVGSKMIDSSIRSKLNSLQNAMKEVG
>gi|56697998|ref|YP_168369.1| hypothetical protein SPO3166 [Ruegeria pomeroyi DSS-3]
MRAAVRLQLLPHMDSIYFFCNLTACYYLLLNRGTLVLGTILFAALGVAAIATVISSDDDSHEEIADGDVP
PPIEEEDGTPSLIQENGLTVVTGNEEPVQIDVEALDEDGDARVYQGSEADETVYIDPDTTSEFSILMGSG
GADTVVTGLGQNISTTDGADADAEEADTVRLIYTPGASEELFEDGSVRGSFSMDKNDVLDVQFPEGESGT
LLPVYSTFVSYPRDACCSFEEEHELTLVYIPDEVEYSLEELESSYYHDWEALGMVPIADFHLGQRGEIDF
THEGESGEFREWDYVREPPTVTSNLAIERQILIRY
>gi|56697999|ref|YP_168370.1| hypothetical protein SPO3167 [Ruegeria pomeroyi DSS-3]
MHLDVQDLRNFYYRSTLGRAAQAAVRGRLLEIWPEAKGQTVAGFGFAVPLLRPYLTQARRVIGLMPGPQG
VMHWPAGMANVSVLCEETLWPIETGHVDRLVVMHGLETSEHPTQVLDECWRVLGPGGRAIFVVPNRAGLW
SRSDKTPFGFGRPYTLGQLETQLRKHQFLPEFHCSALYQPPSFKRFWLKSGALIERTGTRLPTIMAGGVF
MVEVSKQTNPQKGNMIRAKTPGRIRVLEGLSNPMPEPASP
>gi|56698000|ref|YP_168371.1| hydroxyacylglutathione hydrolase, putative [Ruegeria pomeroyi DSS-3]
MPLEIVTVPCLSDNYAYLIHDADAGKTALVDAPEAAPIQSELDRRGWSLDQVWLTHHHWDHVDGLAALRD
RYKPTVIGAEADAHRLPPLDLAVSEGDRFDLGGAPVEVLDVSGHTVGHIAFHLPTGKAVFTADSLMALGC
GRLFEGTPDQMWASLSKLAALPDDTLVCSGHEYTQSNARFALSVDPDNAALKTRAAEIDQARAEGRPTVP
SLLSLEKSTNPFLRAADPGIQSLLGMQGADPARVFAEIRARKDHF
>gi|56698001|ref|YP_168372.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Ruegeria pomeroyi DSS-3]
MPSFSSTLEQAIHAALAAANERRHEFATLEHLLLALLDEPDAVRVMQACSVDLKELRDTLVEFVDEDLSN
LVTDIDGSEAVPTAAFQRVIQRAAIHVQSSGRTEVTGANVLVAIFAERESNAAYFLQEQDMTRYDAVNFI
AHGVAKDPAFGENRPVTGAEHGEEETSSAPSGDGEQKESALSKYCVNLNAKSRAGDIDPLIGRDHEVERC
IQVLCRRRKNNPLLVGDPGVGKTAIAEGLARKIVAGEIPEVLSKTTIYSLDMGALLAGTRYRGDFEERLK
AVVNELEDHPDAVLFIDEIHTVIGAGATSGGAMDASNLLKPALQGGKLRTMGSTTYKEFRQHFEKDRALS
RRFQKIDVNEPTVEDSVKILKGLKPYFEEHHEVRYTADAIKSAVELSARYINDRKLPDKAIDVIDEAGAA
QHLVAESKRRKTIGVKEIEAVVAKIARIPPKNVTKDDAEVLKDLEASLKRVVFGQDKAIEALSSAIKLAR
AGLREPEKPIGNYLFAGPTGVGKTEVAKQLAETLGVELLRFDMSEYMEKHAVSRLIGAPPGYVGFDQGGL
LTDGVDQHPHCVLLLDEMEKAHPDVYNILLQVMDHGQLTDHNGRTVNFRNVVLIMTSNAGAAEQAKSAIG
FGRDRREGEDTAAIERTFTPEFRNRLDAVISFAPLPKEVILQVVEKFVLQLEAQLMDRHVHIELTPQAAE
WLADKGYDDKMGARPLGRVIQEHIKKPLAEELLFGKLAKGGVVRVSVKAGELVLQIDGPDRPRISGDRPP
LLTAD
>gi|56698002|ref|YP_168373.1| M24/M37 family peptidase [Ruegeria pomeroyi DSS-3]
MRAGVDVLASAPGIVTGMRDGVVDRIYGPENAAEVKGRECGNGVVVRHEDGWETQYCHLKQGSVRVRKGD
RVQSGTVLGQVGISGKAQFPHVHLSVRHNGAVIDPFDTGETAQCGADAGSLWRAAPDYDPGGMIDAGFAD
AVPDYVQVQDGTAARASLPADAGALVFFILAFGGQAGDILRLSIEGPKGQLLQQDMELERTQARFFRAAG
RRLKGASWPGGTYEGSAILMRGGVEIDRTNATVTVD
>gi|56698003|ref|YP_168374.1| hypothetical protein SPO3171 [Ruegeria pomeroyi DSS-3]
MALSRRTGHRFQGSVWPGFVDAMTGLLMVLTFVLTIFMVVQFVLRETISGQEDELDALAGEVGRLAQALG
LEERANSQLQARLGALNATLNDTQDDLSQAQALIAALTVERDRSRAALDEAATRITAFEAQVAALLADRD
RALGDVAALEDERGRLLSQQEALNLALAQARDEIDDRAEAARLAAARREALEAMIADLRRSGEENAAQIG
TLKQQLSEEEAARLAEAAAAQALREKLENADAELTAMTLALEAQRREAEDTLTLLAAADAAREQLNAKLA
EALDQIEAARAQARERDELAERLTRVLGQMEVARSEDAARVSALEAELDRIRAEGGETRAALAAARAHAE
ETQSALEAALAQQRAATVATRSQYQDELDRLQSEHAAARAALEAELAKARAEADTTRTDLEARLARGEAE
AASVRAGLEAELARARADLSAARAAADSTAEDRASVEARLLMALESLERAQAAASDNEVLQRRLLAALDA
QTEAESSAARQRSLAEERAALLAQARAALSEEQAVSTEAQRQTALLNQQVAALRNQLGSLQALLDDYKAR
NASAEVQLQSLGQDLNAALARAASEERKRRLLEEAERKRLEEEARVLAEQAKDLERYRSEFFGRLRDVLG
NQEGVRIEGDRFVFSSEVLFDPGSADLSPEGQFEIAKVARILRAIAADIPPEINWVIRVDGHTDNVPLLG
TGKYADNWELSQGRALSVVRYMVESLGLPPDRLSANGFGEYQPVNPADTAEARAQNRRIELKLTEK
>gi|56698004|ref|YP_168375.1| hypothetical protein SPO3172 [Ruegeria pomeroyi DSS-3]
MAQPDREARPQFSHPTRQILTMLIVIGLSGFGVFVAMPRVLPVFQANPYLNGFILLVFIIGVLACFWQVV
QLIGSVRWIEDFAAGQEREDTTPPSMLAPLASLLRSRAARMQISSSSTRSILDSVAERIEEEREITRYIT
NVLIYLGLLGTFFGLATTIPAVVDTIRSLNPQEGEEGLAVFNRLMTGLEAQLGGMGTAFGSSLLGLAGSL
IVGLLELFTGHGQNRFYRELEEWLSTITRVGFSSGEEGHSESGAIAGVIDTMVEQMDALHAMFAASEEGR
AEISGKLGALVETIAEMNQRQAETEDVTAALDRVAAGQETLIDFLREQGAHDGIDAESRMRLRSIDVQML
RILEEISAGRQESMAELRKDIELLAKALSVPRRPLRGVTRDEG
>gi|56698005|ref|YP_168376.1| cation transport protein ChaC, putative [Ruegeria pomeroyi DSS-3]
MMTMWVFGYGSLMWNPGFPVARRELATLSGWSRSFCMSSIHHRGTEEKPGLVLALDAVHNARCRGIAFAV
EPGHEARTLDELRERELISSAYLERELEIDLDIGERVCAVTYVIDPHHEQYCGGMPLERQAQIIATAIGG
RGPNTEYLYNTAAHLAEIGLGDPDLDWLSARVREITS
>gi|56698006|ref|YP_168377.1| hypothetical protein SPO3174 [Ruegeria pomeroyi DSS-3]
MPVSAYKQENEQRQKGQAMLNLVRVALLAAVIWSGYWAVAGFGLRGSVVTWFETQAARGWQADFTEAGLS
GYPLRHRIEIEAPALADPDTGTAWRADRLVLQSPAIWPGRQSLLFPDTPQRLSYFDRTLVIKAEAMRADL
DLAPGVALELRTMGLSAGEWSVTRDGAVLADADALTLSMTQQDQPETYLFHAELSDLAPGRDLRRAMGGA
EGLPRSFERAEISMAMTFDRPWDRAALEERRPQPVEIDLSLAEAAWGELRLFAAGKVSVDEYGIPTGSVA
LKAENWREMVAMAQQAGALPDQAAEPLTRVLNMLAGLGGNPDALDLELGFRKGYVTLGPIPLGPAPRIIL
R
>gi|56698007|ref|YP_168378.1| hypothetical protein SPO3175 [Ruegeria pomeroyi DSS-3]
MTGRGRILSALVLAIWALPLAANAPARSLRPLLRPVAADPVVEAAIAAATEEAAASVAVTRMRPNLRPPS
EQEILAAATPPVPGDTGLGLSPRPELRPKEVEERALFGRKKRMKGAVCGNPDIQGASAGNVPGKIKGCGI
KDAVRITSVSGVRLSTPAVMDCRTAEALNHWVARSVKPTFRRRGPVVELQVAAHYACRTRNNQRGAKISE
HGKGRAIDISAFVMNDGERITVLEGWKRGATRKMLRQVWKEACGPFGTVLGPEADRFHKDHLHMDTARHR
GGPYCR
>gi|56698008|ref|YP_168379.1| cyclohexadienyl dehydrogenase [Ruegeria pomeroyi DSS-3]
MSPVYDRVALIGLGLIASSMFWAIKRAGLAGEVTGFARSEATRDTARRIGLCDRVCESAAEAAEGADLVV
LCVPVGAMGQVAAEIGPVLKPGATVSDVGSVKRAVIDAVGPHIPEGVHFVPAHPLAGTEHSGPESGFAEL
YDNRWCLLVPTEGSDPQAVARLRALWEGMGANVEEMEADHHDLVLAVTSHVPHAIAYTMVGVADHLRRVT
ESEVIKYSAAGFRDFTRIAASDPTMWRDVFLNNREATLDILGRFTEELFMLQRAIRMGDETYLFDYFTRT
RAIRRGIIEAGQDTDAPDFGRVKGKPA
>gi|56698009|ref|YP_168380.1| histidinol-phosphate aminotransferase [Ruegeria pomeroyi DSS-3]
MRGYSSGAPRMNQFTPQPGIMDIALYQGGKAHVDGVANVIKLSSNENPLGPSPAAVEAIRATAAQAHRYP
STDHAELRAAIGAVHGLDPDRIICGVGSDEVLQFVAQAYTGPGDEVIHTEHGFSMYPILARMAGATPVQV
PERQRVVDVDAILAAVNDRTRLVFLANPANPTGTMISEAEVTRLADGLPGHVLLVLDGAYAEFVEGFDGG
AALVSARDNVIMTRTFSKIYGLGGLRIGWGYAPREIIDVLNRIRQPFNLSTMQLAAAEAAVRDQDWVARC
RDQNTTWRTWLAARLAELGVPSDVSCANFILARFADQGEAEACDLFLQSRGLIVRRVAGYNLPQALRITV
GDEAGCRAVVDAVRAFKEARA
>gi|56698010|ref|YP_168381.1| hypothetical protein SPO3178 [Ruegeria pomeroyi DSS-3]
MTLSQFRNVIEADVRAGRLADGLIGEKIMIPGLNGDVPLVYADYVASGRALRQVEQYVSEYVLPFYANSH
TEASYCGAYITGLRRAARAEIARLVGAAEDDAVIFAGSGATAGLNRLVSLLGIAQAARPVVFIGPYEHHS
NILPWRESGAKVVEIPEAPEGGPDLVVLQTALRAHAGSDLMIGAFSAASNVTGIITDTVPVTRLLKAHGA
LSIWDYAGGGPYLPIDMGEGGLRKDAIVVSPHKFPGGPGASGVLVVNRGAVRRDVPTWPGGGTVSFVSPW
GHDYSPDLAAREEAGTPNVIGDIRAALAFVVKDAVGADEIARREAHYNAMALEGWAGNPHLILLGTDKGH
RLPFFSFQVRDGVGRPVHQQLFTRMLSDVHGIQARGGCACAGPYGHRLLGIDRATSEALHADLAAGREMH
KPGWVRLNFSYLMDEATVRFIIDAVNDLSRRTGDYVPLYQGDPATARFKAA
>gi|56698011|ref|YP_168382.1| AsnC family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MRKIDHIDTRLLKELQRDASLSQRDLADRVGLSQNACWRRLKALTDEGVLKGSSARVAREKLGLDLVVFV
MLRTRHHSAEWLQKFRTHVLTIPEVVDFHRIGGDYDYQLKVVTRDMASYDKVYQRLIEKVELDSVTSYFA
MEAIAEGRPLPL
>gi|56698012|ref|YP_168383.1| ribose 5-phosphate isomerase B [Ruegeria pomeroyi DSS-3]
MTASKRIVLSSDHAAIDLRRAVADHISAQGWEVVDIGPQTTESTHYPKHGRAAAERVASGDCSLGIILCG
TGQGIMMAANKVAGIRCGVCFDTFSARMIRMHNDANMLSLGARVVGEGLALDIVDAFLSAEFEGGRHATR
VDMIETPEG
>gi|56698013|ref|YP_168384.1| 30S ribosomal protein S4 [Ruegeria pomeroyi DSS-3]
MTKRTSAKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGKMSDFGLQLRAKQKLKGYYGDLTEKQF
RRIYGEAERVKGDTGENLIGLLERRLDAVVYRAKFVPTVFAARQFVNHGHVLVNGKRVNIPSYRVKEGDV
IEVRERSKQLASVLEAVSLAERDVPDYLEVDHSKMTATFVRTPHLGDVPYAVVMEPNLVVEYYAKN
>gi|56698014|ref|YP_168385.1| hypothetical protein SPO3182 [Ruegeria pomeroyi DSS-3]
MKTGFRGTFVISWSQTDLDGLEGAPLDALTAGAVWSWRGETVQVDGPTGVLRLDRADGEEALRKRAARKV
RRLVGAAVQHRTDVEAIEVEDPLMDQAFVVTNGAQSYTITVIETGNGAPPLLMFIDELPPRNTDLWVVHH
NLSAADPVPGARERGGVICFTPGTRIATPTGPRLIEELREGDKVQTRDSGPQEIQWIGQRRMTGARLFVM
PHLRPIRMRVGALGIDRPDAELLVSPEHRMLLRGPAAQALFNSNEVLVPARDLVNDSTITVDLTLREVTY
VHLLLPSHQILWANGIETESFHPANAALSALAETDRRRLLQRMPEIEADPYLYGGFARRSLTPTEAALMM
HEAA
>gi|56698015|ref|YP_168386.1| oxidoreductase, molybdopterin-binding [Ruegeria pomeroyi DSS-3]
MTLALPSVCPLDCPDTCSLSVTVKDGRITQVRGSDANPFTAGVICNKVARYYPDFVHGPRRLTRPLRRTG
PRGTGAYESISWETALDLIHEGFTRAIAAHGPQSVLPLNYAGPHGELAGGSMDRRFFYRMGATMLDRGPL
CGGVRGTAYTSLFGAAPGMPPEQAEQADLVLVWGNNVTVSNLHLMRVLKRVRAAGGRVVVIDPRRIKLAE
QCDLHLQIKPGSDVVLAMALAAELERRGALDHAFIDAWVLGADQYLAAARGYDVQAVVQHCGLTPVAFHM
LADWIAEARTMATSLGNGIERGRSGGAGLRAAMALNALTGQHGRPGAGVIAKPGLAFPRTSAKLQGDHLK
QPGTRVVNIVDVAAHLLDETLDPPVQALMIYNHNPVATHPDQSSMIRALSRPDLFIAGADVTMTDSMAFC
DVILPAASHFEFDDIYGAYGQTYLQRAEPVIAPVGESLPNTEIFRRLAARFGYDGPEFRDSDAALMDQAM
DGTDPRLRGHAPSQLPIDRALEMTDPAGAPLVMCDTVVPATPSGRIELFSQDLEDRFGCGLPRHDPVAPD
LPFTLITPSSSKRTNATFGSHADSLDPEMVEMHPEDAARLGLDDGVPVVLRNGRGAVELRVKITDATRPG
VLYSPKGTWRESSATGQTVNALIPSDIRTDIERGACYNETFVEVSRA
>gi|56698016|ref|YP_168387.1| acetyltransferase [Ruegeria pomeroyi DSS-3]
MAIRRNELGQPIGAALPHWRGCPRPERQRMEGSFARLEPLSAARHGADLWHAFAADTEGHGWTYLPFGPF
DDQAGMTAFLEAMSKTEDPLYFAICDRASGRAQGIASYMRIQPEHGVIEVGGIAFAPVLQRSRMATEAMF
LMMAHAFDTLGYRRYEWKCDALNAPSRRAAERFGFSYDGRFEQAIVYKGRNRDTAWYSILNRDWPKLRQR
FVDWLAPENFTSDGQQRNKLGVGRA
>gi|56698017|ref|YP_168388.1| GntR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MTQTSWPAISIDRTGPVPVFEQICAAIRARASTGDLPEGTAVPPTRVLAVELGVSRSTVVIAYEQLVAEG
YLRARQGSGHVVCAMGEVEAAPAAARPRPARAEASPPSARPFVAGTPDMRLFPYRQWARTVARLCRSNPQ
AMFTTTDAFGNLALRGAIAAHLRDWRGVVAAPEQIIITAGATDALELCMRSLSRTGETIALEDPGYAPLR
SFARAQGLRPVFLPLDEQGATLPPPVETPRLAVLTPSHQYPLGGAMSPSRRSAWAHWARSGDAWIVEDDY
DSEFRYAGRPIPAMAGFDPLSRTIYVGSFSKIFSNALRLGYLIVPEPLLGAFRQTVLRFGVRAGSMPQQA
LAEFMSSGEFYRHLRRVRRIYGERRRFLLDRLARDFAEFGSATDHQAGMQTVLHLRPDLDDAALAERARA
AGLTVSALSRYCAVPGRGNGLILGFCAFSEVEMAPALDALRDLLANA
>gi|56698018|ref|YP_168389.1| glycine betaine transporter [Ruegeria pomeroyi DSS-3]
MSIKPPFTDIEVKRAASGFYQGHSVEIALFSKAIMVGLVLWALVWPANANGVLGSLNWRLLEDFNVFYIV
IVGFFAVFLFVLAALPQTGKRIMGRPGEGTEFSNFSWFSMMFGAGLGVGLMVFATAEPLGLWGSNPVVVS
GAVQGNTEEALQSAYRYTFAHYGFHAWAIYVVTGLALAYYAYTRDMPLTIRSALTPLFGSLMNGFLGHVV
DVLGVLATILGVSVTIGFGVSQFIDGMYAITGMEWMMDMTGEAPAPGTVGLIAGLVVIMGLSIVSAVSGV
GRGVKYLSNLNLVLSLILLFTFVLFGSFLFAMTTYASALVDYLLNFLSISFGAYGPQDPAAFVAALPAEA
APYADALRGGATNAWGSFEGFKSGLEGEAAALSDEVLAAAYAAGEPGRQFGWQAGWTTFYWAWWIAFSPF
VGLFLARISRGRTVREFIIGCLFAPALVCFAWMTILGGTAIDLELTGDANGAIIGASNTAKLFVTLGQML
SGGFLSAITIMCVVLIMTFLVTSADSGILVMNTIMSGGDQNVGNKHKIVWGVILTAVIGTLLIAGKTNGG
ADPMEALKSAMIIGALPFTAVMGLMCVSLAKALYRDGKREKLGLAVGDPAE
>gi|56698019|ref|YP_168390.1| malate/L-lactate dehydrogenase family protein [Ruegeria pomeroyi DSS-3]
MTETRTLSLDEIEDLSFRALVAVGTSEANARPLAVATAATEADGIASHGLLYIPIYCEHVQCGKVDGQAE
PRLDRPAPSVLTVDAATGFAHAAIDLGFDQLMPLARSQGVAVLAIRNSYNCGVLGYHTARLARAGLVGLG
FTNAPASIAPSGGSKPVVGTNPFSLAVPGEDGEPAILIDQSASTIAKSEVMKHAREGKPIPVGWALDGEG
NPTTDPEVGLKGSMAPSGGYKGVGVALLVETMAAALTGATLGIDASPFSGTAGGPPRTGQFFIAIDPGAT
SGDRFAPLVARLAAAVHDQDNAHLPGDGRRGRRLRARAQGVAVNSATLERIEKIIAA
>gi|56698020|ref|YP_168391.1| hypothetical protein SPO3188 [Ruegeria pomeroyi DSS-3]
MSFSLNEIEATAKRATRGAGYPWGLAEEAAKATRWLAAHDLDACAELAGLLTRIDGVPLADLAPEPKGTT
WVASGGTMCPLAAGAALSDRAAQLRDTGIRLEQLARPALLMPFAALIAQQIGRPVTLRWEGGSAVTDGVA
LDLSGTAPDLAAWVEVSPGGQIDAATPIRSRARPAPEAWVTLNRLAHRTYAPATEESRLKGAGAGLSDND
>gi|56698021|ref|YP_168392.1| hypothetical protein SPO3189 [Ruegeria pomeroyi DSS-3]
MDTAPNRQIQRRDPATVMRLSRLGSLHQCRLSFMRILTRRMARENWSFSRPVFRIDAAGVGHAVYTAQGP
ERAYSLVAFAHDLPPEMRSDRVIATAWDATFTLFDGIPTEDDIARLSQNVPLQEAGRVSECEISVSRANR
SVRLWAHVVDALASGQQPDRAEIDKVGYLMRTTAVYGSGKLGAADREQIADRPEMQVPFQAEMLSVYLTR
VFVRDLVQHMARAKGGESAVDLDPALARRMGIGNSTGLGMAPYIVNHPVLFNNWVMAREEAIARVRSVAT
ASPDAAAQFRRMLRRSEVSLGQWRSEHPIQLEKLGDLRRDMEVLSRHVAGDDLLNDHPWDRLMRWAEGAL
SEEGQELVASLILEPYPDLVDGLDSCMADGNPGAFRIEGAMAISELRGLIAASYAWAFDLDWSAPENCAR
AWYVSEEKLEPRLGERFDEPVAEYEQPLAPARDAAAAHAALADWDGARLVAEFLLAHPEHRHTVRRAQMS
RLAPYGEIHDNTISASVLPIDMLRAKLAFFGAIHFDPRSDRWVRICMYSGAPYPEELSPETADDWVYPEV
PA
>gi|56698022|ref|YP_168393.1| renal dipeptidase family protein [Ruegeria pomeroyi DSS-3]
MSYRIDGLQYANWSEKIFRQLRAGNVDAVHVTIAYHESFRETVLNFEKWNRWFEQYPDLIMKGQWASDID
TARETGRTAIFFGFQNPSPIEDDIGLVEILHTLGARFMQLTYNNQSLLATGCYEAEDAGITRMGRQVIKE
MNRVGLVVDMSHSADRSTIEAAEISERPIAITHANPHDWAPALRNKRDDVIRAVTENGGMLGFSVYPHHL
KDKSDCTLDSFCEMIARTAERYGVDHLGIGTDLCQDQPDSVVEWMRTGRWSKEIDFGEGSASAPGLPPMP
HWFEDNRDFGNIENGLRATGLNKDEVAGIMGGNWYRFFAQNFVPQG
>gi|56698024|ref|YP_168394.1| aldehyde dehydrogenase family protein [Ruegeria pomeroyi DSS-3]
MSDTKLNLIAGEWLAGEAEIENRNPSDLSDLVGMFAQASADQLDATLHQARRAQAEWAAYGMERKQAVLM
AIGTELMARAEELGTLLSREEGKPLAEGKGEVYRAGQFFTYYAAECLRQLGENADSVRPGVEVDVRREAV
GVVAVISPWNFPTATASWKIAPALCYGNAVVWKPANITPASAVALTEIIARQDIPKGLFSLAMGSGRSIG
QRLVESPLVNAISFTGSVPVGKGIASAAIQNLTKVQMEMGSKNALAVMDDADLDLAVTLALGGAFGGTGQ
KCTASSRLVVHAAIHDAFVEKLVAGTQAMKVGHALAEGTQMGPVVSQQQLSENLAYVDLGKSEGAELACG
GQRLEMPQEGYYMSPGVFLNTTNTMRINREEMFAPLTSVIKVGSYDEALSVVNDTNFGLTSGIVTKSLAR
ATHFRRNARTGVVTVNLPTAGTDYHVPFGGRGDSSYGPREQGKAAAEFYTTVKTAYISAGAPQ
>gi|56698023|ref|YP_168395.1| LysR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MIKIEMLRCFSTVAQTGNLADAAMRMGRTQSALSMTLKQLEEHLGQRLFENERKNRLTPLGQEVFRFAQQ
QLRQFDDTIQAIEAAARAPQGLLRVASIPSASGLALPGAIETMMQRHPALELELRDMDTGRVVDALLQGQ
ADLGIVSGQPVLNGVESETLFEDAFGLLCATGHPLAQQAQLPDVDAVFASGFIRNSLCALIEAPEIRAAL
PRARITVHNTHSLLAMVRTGKWVTILPRSVAQVQPKELVFRPIAGLEEQRSVSMLIHTRAQFPQLVAEFA
DILRHSPWTG
>gi|56698025|ref|YP_168396.1| hypothetical protein SPO3193 [Ruegeria pomeroyi DSS-3]
MDNYVNLIKLSVGSESVDSLAEWQATRRAQTPDGLPRHVTRMWPKREGEILNGGSIYWVIKGLIQCRQRV
IRMDEVTGQDGTRHCALVLDPELHRTHSTQKRPFQGWRYLNPADTPPDLPKGRAQDDALPEDLNRALAEI
GVI
>gi|56698026|ref|YP_168397.1| ribonucleoside-diphosphate reductase, putative [Ruegeria pomeroyi DSS-3]
MSRFAAPIAEQIWDMKYRFKQADGTPIDQTVEDSWRRIARDLARVEQDPDRWEREFYTALEDFKYLPAGR
ITAGAGTARQVTLFNCFVMGTIPDSMGGIFEMLKEAALTMQQGGGIGYDFSTIRPRGADVKGVAADASGP
LSFMDVWDAMCRTIMSAGSRRGAMMATMRCDHPDIEQFIGAKSDPARLRMFNMSVLVTDAFMEAVKADGS
WELQFDGKVYHTVEARTLWNKIMQATYDYAEPGVIFIDRINAANNLNYVETIAATNPCGEQPLPPYGACL
LGSVNLARLVSNPFEDAAELDPEALQKLVATAVRMMDNVVDASRFPLPEQAAEAQNKRRIGLGVTGLADA
LLMLGLRYGSDEAAKQTEDWLHAIARAAYLASVELAKEKGAFPLFDAEKYLASGTMRAMDEDVREAIRTH
GIRNALLTSIAPTGTISLYAGNVSSGIEPVFAYAYTRKVLQKDGSRTEEEVVDYAVQMWRDKFADAPLPD
YFVNAQTLAPADHVRMQAAAQKWIDSSISKTINCPEDISFDAFKDVYMQAWDLGCKGCTTYRPNDVTGSV
LTVSESADKAPGESASAPHGTEGGDVIYMSEPLDRPQTLEGNTYKLKWPDSEHAIYLTINDIIINGHRRP
FEVFINSKNMEHYAWTLALTRMISAVFRRGGDVSFVVEELKAVFDPRGGAWVKGKYIPSILAAIGGVIEQ
HLIAIGFLEGEGMGLKSDPQAQVVNGDMPRGKACPSCGQFDMQMVEGCMTCRSCGHSKCG
>gi|56698027|ref|YP_168398.1| histone deacetylase family protein [Ruegeria pomeroyi DSS-3]
MGKTAFISNEKCFWHFGGNYALLAPVGGLVQPMVAGGLPEAPETKRRLKNLIEVTGLHSDLEMVTGGSAT
IEDVLRVHPRSYIDEFRRLSDSGGGELGLRTPFGPGAFEIAMLSAGLVIDAVEGVVQGRYRNAYALSRPP
GHHCLPDWPNGFCLLANIAIAIEAAKAKGLLGKVAVLDWDVHHGNGTEAIYYERDDVLTISIHQDRCYPH
DTGSIDDQGKGAGLGFNMNIPLPPGCGHNAYVEATERLIIPKLKAFDADLVIIACGFDAGGFDPLARMMC
SAETFREMTRRVMQVSDGKLVAAHEGGYSELYVPFCGHAMLEEMSGSTIHAADPLAQRVMGQQPGERVQA
FHSELIDDMVAKLL
>gi|56698028|ref|YP_168399.1| DNA repair protein RecO [Ruegeria pomeroyi DSS-3]
MDWRDQGILLAVRRHGETSAIIDTFTASHGRHAGVVRGGTSRRIAPILQPGAQLDLSWRARLEDHLGSFT
VEPLRSRAAAAMSGRLALAGLNAVVSLLSFCLPEREAHPRLYKQSEQLLDLLGQDEIWPLAYLRWELALL
DTLGFGLDLSSCAVTGNSDDLVYVSPRSGRAVSAGAAGEWAERLLPLPPCLRGEGPAPDPEIAQALRTTG
HFLEHRVAPALGHAPLPQARGRLLDLISRLP
>gi|56698029|ref|YP_168400.1| hypothetical protein SPO3197 [Ruegeria pomeroyi DSS-3]
MPARLALLLPALALGYCGQDETATAYGAAGQVWQAQSIDAAAFAVGAELRFPEPGRIAGQGPCNSFTARL
DAPYPWFEIADLVATRAACPELEAEGAFFAALLAMEQIEVSGEVLILRNEAGHEMLFRAAD
>gi|56698030|ref|YP_168401.1| ribonuclease III [Ruegeria pomeroyi DSS-3]
MKLSAEMKAFEARLGYSFERPELLVRALTHGSISSSTRQDNQRLEFLGDRVLGLVMATALLEADKDATEG
QLAPRFNALVRKETCAEVAREADLGAVLKLGRSEMMSGGRRKLALLGDAMEAVIAAVYRDGGFAAAEAVI
LRLWGARVHQVEADARDAKTALQEWAQARGQTPPRYELVKRSGPDHAPVFTILAELADGRRAEATAGAKR
QAEQAAARKLLDSLD
>gi|56698031|ref|YP_168402.1| signal peptidase I [Ruegeria pomeroyi DSS-3]
MASKAAKTGNAFVETIKTIVYALLIAGVFRTLFFQPFWIPSGSMKETLLIGDFLFVNKMAYGYSYASCPS
LVLPQFGIDIDAEDVCGWAKGDNDRLFGGTPERGDVVVFRHPVSGRDFIKRLIGVPGDRIQMKDGVLYIN
DQAVKLEDDGVFEELAEAQGPQRLRPRCENGPVGEGGICQKSRQIETLPNGVSHKIVNIGNQASDHTGVY
TVPEGNYFFMGDNRDNSSDSRLPQSAGGVGYVPYENLIGRADRIMFSSAGRSMLFFWTWRSDRFFKGIE
>gi|56698032|ref|YP_168403.1| 4'-phosphopantetheinyl transferase [Ruegeria pomeroyi DSS-3]
MILGIGTDLANIERIERTLDRFGDRFRNRVFTEIEQRKAERRSDTAGTYAKRWAAKEACSKALGTGLRMG
ISWKDMAVSNLRSGQPVMQVTGWAAERLREMTPEGYEAIIHVTLTDDHPWAQAFVVIEARPLAEVGEVNL
TYPAPPRM
>gi|56698033|ref|YP_168404.1| pyridoxine 5'-phosphate synthase [Ruegeria pomeroyi DSS-3]
MSVPHLRLGVNIDHVATVRNARGGEYPDPIRAAKIAEQAGADGITAHLREDRRHITDADIDGLMAALSVP
LNFEMAATDEMQKIALRHKPHAVCIVPEKREERTTEGGLEVAREENRLAHFIAPLREVGCRVSIFIAADR
RQVEAAHRIGAQVIELHTGAYCDAHAEGDFATRDRELEALREMSAFAHSLGLEVHAGHGLTYDTVQPVAA
FPEVMELNIGHFLIGEAIFRGLHPAIAEMRRLMDEARA
>gi|56698034|ref|YP_168405.1| hypothetical protein SPO3202 [Ruegeria pomeroyi DSS-3]
MVFKRRDRRSPLQVLWELIWPRGGWTRAFHYVKHRVRRLPDRPERIARGIGAGVFASFTPFYGIHFVIAA
ILARLINGNILAGLSGTFFGNPLTYVPIGVVSLQTGHFLLGTEFHEGAKQGLMRKFARAAGDLKDNFLAL
FTDRDADWQALGLFFDEVFFPYMIGGIAPGIVAGVVCYYLSLPVISTYQKRRRAKIKAKFEAIKKKAQAD
LPNPGNPG
>gi|56698035|ref|YP_168406.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase, putative [Ruegeria pomeroyi DSS-3]
MPSWRRRGRAEDAARKDADRMISADDLIALVRNYNPKTNAERITRAYEFGQQMHDGQFRHSGEPYFTHPV
AVAAILTEQRLDDATIITALLHDTIEDTKASYGQVSELFGEEVAMLVDGVTKLTNLQLSSRETKQAENFR
KLFMAMSKDLRVILVKLADRLHNMRTIKAMRPEKQAVKARETMDIYAPLAGRMGMQWMREELEDLAFRVL
NPEGRQSIIRRFITLQRETGDVIHRITGDMRHELDKAGIEAEVFGRAKKPYSIWRKMQEKDQGFSRLSDI
YGFRIITLSEEDCYRTLGAIHQRWRAVPGRFKDYISQPKSNGYRSIHTTVSGRDGKRVEVQIRTRQMHDV
AETGVAAHWSYRDGVRTQNPFAVDPAKWIAGLTEQFDSEEDHEDFLEAVKLEMYSDQVFCFTPKGDVVKL
PRGATPIDYAYAIHTRIGHACVGAKVDGIRVPLWTRLKNGQSVDVITAEGQTPQVSWLEIAVTGKAKTAI
RRALREVDRERFIKLGHELARSAFDHVGRKATDKALDTAAKHLRLKDRSELLARLGSAELTAHDVVQAVY
PELAPDEGDAIPPRRAVIGLEPGQSFDRAPCCQPLPGERIVGITYRGKGVVVHTIDCDRLSEFETQPERW
VDLHWHSGTHPAAYGATLDLTIGNDAGVLGRICTLIGEKKANISNLEFIDRKPDFYRLMISVELRDVEQL
HSLMLALEAEGDVASVERYREKAKAGAAAG
>gi|56698036|ref|YP_168407.1| DNA-directed RNA polymerase subunit omega [Ruegeria pomeroyi DSS-3]
MARVTVEDCVDKVPNRFELVLLAAHRAREISAGAAITVDRDNDKNPVVSLREIADETQSADDLRERLIEA
NQTQIEVDEPEEDQMALLMGAESDRPVEDDMSEERLLRALMEAQGQG
>gi|56698037|ref|YP_168408.1| 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase [Ruegeria pomeroyi DSS-3]
MVSEQFAVIALGGNLSFDQTPPEVTLRNAVRMLARRGLVIRDESRFFTTPCFPAGAGPDYINAAISINTN
LSPVALLELLHQVEAEFGRAREQRWGMRTLDLDLICHGDSVLPDRAGHDAWRQLDPARQAELAPDQLILP
HPRLQDRGFVLVPMADVAPDWRHPVLGLSVQEMLAALPAGDLAEIRLL
>gi|56698038|ref|YP_168409.1| hypothetical protein SPO3206 [Ruegeria pomeroyi DSS-3]
MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFMRRGKMLRAFYYTALLENDEYSPIRPLVDWLHY
NGFTMVTKPAKEYTDSMGRRKVKGNMDIELTVDAMELAPRVDHIVLFSGDGDFRPLVASLQRQGVRVSVV
STIRSQPPMISDELRRQADNFIELEELREVIGRPPREVPAEPRSFAANGN
>gi|56698039|ref|YP_168410.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Ruegeria pomeroyi DSS-3]
MTKSPLTLYLAAPRGFCAGVDRAIKIVEMAIEKWGAPVYVRHEIVHNKFVVDGLRAKGAVFVEELDECPD
DRPVIFSAHGVPKAIPAEAERRQMVYVDATCPLVSKVHIEAERHAEHGLQIIMIGHRGHPETIGTMGQLP
EGEVLLVETVADVARIAVRDPARLAFVTQTTLSVDDTRDIVAALQARFPQIVGPHKEDICYATTNRQEAV
KAVAPKSDALLVVGAPNSSNSRRLVEVAAKAGCSYAQLVQRADDIDWRALDGIATIAVSAGASAPELLVN
EVIDAFRARFDVTVEVVETAVEHVEFKVPRVLRQPA
>gi|56698040|ref|YP_168411.1| glutathione S-transferase family protein [Ruegeria pomeroyi DSS-3]
MTPNRPALTGYRYSVYTRAARLALIEKAVAYDYHEHDPFAPGAQGAHPFGRVPVLHHTGARFYETAAITA
YVDLAFPGPALMPERPAAVARAVQVISIVDAYAYWPLVRQVYSHAVFRPAMGEPASQQSLREGMERAPAV
LAALDEIAAEGLVLSGPVTRADCHLAPMIAAFVQAPEGADLLRRYPALAAWWQDMAGRDSLHLTETPLP
>gi|56698041|ref|YP_168412.1| amino acid transporter LysE [Ruegeria pomeroyi DSS-3]
MISLQFFITAFVVVLAPGTGVIYTLAIGLGRGRSAAAWAALGCTLGILPHLAAAILGLAAILHSSALLFQ
LVKAAGVAYLLYLAWQALRSDGALAIRSEHSHQPGWRIAWRGALINILNPKLSVFFLALLPPFLSGNPAS
ATAEMSLLGLVFMAMTFAVFLLYGAFASAARTYLMQSERALRWMGRGFALVFAGLAARLAMERA
>gi|56698042|ref|YP_168413.1| hypothetical protein SPO3210 [Ruegeria pomeroyi DSS-3]
MTAIPRAPLILGLAGLIPFLWGALTYLSPAAQAWGAAALGPRFVGPYVQIAYGQIILAFMSGVLWGFATK
ADDRRAATGYVLAVLPALWAFFMTGGGPTGAAINLIFGFLGLLMLDAAFASWGLAPVWWMRLRLLLTAVV
TICLAVGAFL
>gi|56698043|ref|YP_168414.1| hypothetical protein SPO3211 [Ruegeria pomeroyi DSS-3]
MPGSRSLLVSDPETIRIYDDRASDYAALTEDHNAADPALEAFVAALPPGGRVLDLGCGPGTSAARMAQTG
LTVVAVDASGEMVALAARHPGVTARQARFDEIDETAAYDGIWANFSLLHAPQAEFPGHLAHLFRALKPGG
IFHIALKLGTGEGRDSLGRFYSYYQEDALEHLLQQAGFTITARSFGAGPGLSGKVEDWIAMRAHA
>gi|56698044|ref|YP_168415.1| ribonuclease H [Ruegeria pomeroyi DSS-3]
MPELFAYTDGACSGNPGPGGWGVLLRAIEGETVLKERELCGGEAETTNNRMELLAAINALETLERPSKIT
VVTDSAYVKNGVTGWIFGWKRNGWKTAGKKPVKNVELWQRLDLAQARHDVTWKWVKGHAGHPENERADEL
ARAGMKPFKPKKARA
>gi|56698045|ref|YP_168416.1| hypothetical protein SPO3213 [Ruegeria pomeroyi DSS-3]
MSLLALLDYASVLVFALTGALVASRAQLDLVGFAFVACLTAVGGGTVRDLLLGRDPVFWVGQPAYILIAS
GAAALVFFTAHLVESRYRLLIWLDSFALSIAVAAGTGVALAQGQPPVIVVLMGMMTGCLGGLMRDVVCNE
VPLVLKQGELYVSCALAGAVAAVIATGLGLATLPALGLCALVCWGLRAGSLIFGWRLPVYKSRPPRTRG
>gi|56698046|ref|YP_168417.1| hypothetical protein SPO3214 [Ruegeria pomeroyi DSS-3]
MHIVVLIIIGAAAGFLATRLMRVEADIPTTMLIGIVGALIGGLILRALLTMMGWLSGFVGAVLGALLVVW
LWQTYLRRR
>gi|56698047|ref|YP_168418.1| hypothetical protein SPO3215 [Ruegeria pomeroyi DSS-3]
MRMFMVLMGTVVIAGIVGYISEKSGFTHNGYLQSIIICVGGAFLFYFVRIMFGIGFGSAGMNAILSSIGA
LIIVPFHWRK
>gi|56698048|ref|YP_168419.1| methionyl-tRNA formyltransferase [Ruegeria pomeroyi DSS-3]
MRVVFMGTPDFSVPVLEALVAAGHEIAAVYCQPPRPAGRGKKDRPTPVHARALDLGLEVRHPVSLKGAEA
QADFAALGADVAVVVAYGLILPQAVLDAPRHGCLNIHASLLPRWRGAAPIHRAIMAGDEATGICIMQMEA
GLDTGPVLLRSRTPIRAEETTGALHDRLSAMGADLIVEALARLPELTPEPQPEDGVTYAAKIDKAEARVD
WTRPAVAIDRQIRGLSPFPGAWTEIAGERVKLLASRLDEGQGTPGEVLDDALTIACGTGAISLIRLQRAG
KAAQDADIFLRGWPVPKGTRL
>gi|56698049|ref|YP_168420.1| peptide deformylase [Ruegeria pomeroyi DSS-3]
MTVRRCLPWPDKHLRTRAAEVSEITDEIRAIWTDMIDTMEAMPGVGLAAPQIGVMLRLAVVDGSSERGRA
VRLANPEILHASIELREHDEASPNLPGVSAKLKRPRAVTVRFLNEQGQVDRRDFVGIEATSVQHQIDHLN
GRMYFDNLSKVKRDMLLRKARKLGG
>gi|56698050|ref|YP_168421.1| peptide deformylase [Ruegeria pomeroyi DSS-3]
MSVLPILTWPDARLSWRCDPVEGIVPDDLIRDMFDTMYAAKGRGLAAPQVGVMQRFFVMDVGWKEGPPSP
MAMINPVIMAAERVPVEMEEVCLSIPGLSVPVTRPKAVTVQWTAPEGDIHMADFDGFEARCIQHEFDHLN
GVVTLDHLDPRARAAMLSAYEGNHS
>gi|56698051|ref|YP_168422.1| peptide deformylase [Ruegeria pomeroyi DSS-3]
MKRAILIHPDPRLKKVCAPVADISDELRALADDMLETMYDAPGIGLAAPQIGVLDRLIVLDCVKEESAPA
RPLVMFNPRVVAASDETNIYEEGCLSIPEQYAEVTRPKVVDVEWIDRDGKLQSETFDGLWATCVQHEIDH
LDGKLFIDYLKPLKRQMITRKMQKLKRERARA
>gi|56698052|ref|YP_168423.1| aminotransferase, classes I and II [Ruegeria pomeroyi DSS-3]
MTPETQMSFDDLIDRHGTFCSKWDMMEPIYGVPAQDGLAMWVADMDFRAPDHVLARLREMTDHGVLGYVD
YSKPYTDAIRWWMRNRHDWDVAPEAIFTTTGLVNGVGMCLDTFTQPGDGIVLFTPVYHAFAKVIRNAGRQ
VVECQLVNTDGRYEMDFAAYDAQMTGNERMVILCSPHNPGGRVWTQEELRAVADFAKRHDLLLVSDEIHH
DLVYPGHTHIPMPNAAPDIIDRLLMLTAPSKTFNIAGLHTGQVIIPDPELRGRFAKRMAALSLAPNSTGQ
MATLAAYSPEGAEWVDGLLAYLDENRRLFDSAIAAIPGLRSMPLEATYLAWVDFSGTGMERAEFTERVEQ
QAKIAVNHGTSFGTGGENFLRFNLGTQRARIEEAIDRLNRAFGDLQ
>gi|56698053|ref|YP_168424.1| hypothetical protein SPO3221 [Ruegeria pomeroyi DSS-3]
MSTYISKEVSEDLARARIAGLKKMSRLRVEHGGVFYTVLRLWRDGFAVEAETTPALRGLVDIYEGPNLLY
QCLIVASGGEGGEMVYEFKRHTLAQDRAPLDFERAADAPVGLLGKG
>gi|56698054|ref|YP_168425.1| hypothetical protein SPO3222 [Ruegeria pomeroyi DSS-3]
MGLLIEGIWHDTWYDTKSSGGAFRRSAAQFRNWVTPDGAPGPTGKGGFAAASGRYHLYVSYACPWAHRTL
IFREIKGLSAHIPVSAVHPDMLDQGWTFAPEPQGRTGDRLYGLNYAHQVYTRADPTYSGRVTVPILWDSE
RQTVVSNESSEIIRMFNSAFDGLTGNRDDFWPEALREAIEPVNARIYDTVNNGVYKCGFATTQEAYDAAI
EPLFDTLDWLDSHLAQNRYLMGDRLTEADWRLFTTLIRFDPVYHLHFKCNRRRLVDYPNLWAYTRELYQW
PGVAGTVHMDHIIRHYHYSHDSINPHRIIPVGPALDLLEPHRRDQRTVA
>gi|56698055|ref|YP_168426.1| response regulator [Ruegeria pomeroyi DSS-3]
MHVLIVESNPELGTLWQRHLQRQGQQVTLVTSQEDAILALYRAEFEIIVLDLVLEQGSALAVADFASYRR
PDARIIFVTNTTFFSDGSIFAHSPNACAYVHGDTPPEDLAAMVEHYATVR
>gi|56698056|ref|YP_168427.1| cobalamin biosynthetic protein CobC [Ruegeria pomeroyi DSS-3]
MNTGFANPSAKPDDPTDPRARRDHGGGLDGAMRRYGGQRADWIDLSTGINPLPYPVGTLLPEDWTALPDH
GAFGELIRAARAFWHLPEAAAVLPAPGASALIARIPALADPARVRITQPTYNEHAAAFTAHGWQVVADGP
AEARVIVHPNNPDGRIWSEAEAEGALCVIDESFGDVAPETSLAHLAARPGTVVLKSFGKFWGLAGLRLGF
AVALPETIARLNDLTGPWAVSGPALRIGTRALSDTAWAEETRIRLAQEAARLDTLMSAGGVQVLGGTDLF
RLYQVDDAAAWQDRLARARIWSRIFPYSDRFLRLGLPPAEGWDRLESAL
>gi|56698057|ref|YP_168428.1| cobalamin biosynthesis protein [Ruegeria pomeroyi DSS-3]
MSTALLLGFAMLLDAALGEPEWLWSRLRHPAVLIGDIISVLDDELNEGGHRRLKGVAVTAILAVGALSVG
ALLSLLGPVAEVLICAILLAQKSLAGHVADVADALRLSLPEARRSVARIVSRDTATMSEPQVARAAIESA
AENLSDGVIAPAFWFLVGGLPGLLLYKTINTADSMVGYMNERYAQFGWAAARLDDLLNLIPARLTCGMIV
LLSNGWRHWRGIVEDAQRHISPNAGWPEAAMARALNIALAGPRSYHGEIRHLAWVNEEGRKEIGPREIER
AVTLLWQVWALALGLTLTLVALAAIF
>gi|56698058|ref|YP_168429.1| hypothetical protein SPO3226 [Ruegeria pomeroyi DSS-3]
MRILPQIMAAIVLASPALSQCGGGFSSFVDGLKAEAVSMGHDAALVDRFFQGAAQDAKVLKADRAQGVFQ
KPFVEFSRRLISQNRLDTGKAMGRKYDAVFDRIEAEYGVSRGVLLAFWAFETDFGGFQGDFNTRNALITL
AHDCRRPELFRPQIFAAIELYSHGDFDPARTTGAWAGEIGMVQMLPRDILENGVDGDGDGHVTLKTSAPD
ALMSGARMLSHLGWRAGEPWLQEVTLPAQMDWSLSGPGKPRSAGEWQAMGVRPRAGDLADLPASLILPQG
HKGPAFLAYPNFDVYFEWNQSFVYVLTAAYFGTRLEGGQVYDAGNPAPGLDGAGMKALQQKLQARGHDVG
KIDGILGAGTRAAVQAEQARLGLPADAWPTAELLNRL
>gi|56698059|ref|YP_168430.1| hypothetical protein SPO3227 [Ruegeria pomeroyi DSS-3]
MILRIALACTLVATPLMATEWRLKEGDRPLNSSELEALAGRTLTFYDDGRSTYSAGGSFSYTYSPANGGG
TAFGTYHIAEDGSICTRFRNGLGRCDLYVLNGTRMLLITETGERYPVRPE
>gi|56698060|ref|YP_168431.1| SMC protein [Ruegeria pomeroyi DSS-3]
MRFNRLKLTGFKSFVDPTDLIIADGLTGIVGPNGCGKSNLLEALRWVMGENRPKAMRGGGMEDVIFAGAS
SRPARNFAEVTLLMDNSERLAPSGFNDADQLEIVRRITRDVGSAYKANGKDVRARDVQILFADASTGAHS
PALVRQGQIAELINAKPTSRRRILEEAAGISGLYQRRHEAELKLKGTETNLTRVDDVLEQLGTQLAQLAR
QARQAARYREIGEQLRLAEGQLLYRRWRDADEARAKAEEVLRHRTLDASRAEAAARQAEALRNETEAALP
ALREEEAIAGAVLQRMHVQRDTLNDQEQRARQQIEVLTARIAQLGRDIERETGLNRDAGDTIERLEWEAR
ELSKAGAGHADRLAEAAELAREAAAVLQEREDHLSQVTEDVARLAARHQSAQRLVEDSRKTLARSEAEET
RARGAVEEAHAALDRAGEAYEGAESAAEEAAEAAEAAEEALAAADELRGETQAREAEARAQLSEAEGELG
AIRAETGALAKLVERDTAEGGHVLDLMRVEPGYEKALGAALADDLRAPLVEGEGPSGWLDLPDYTQGQPL
PEGADPLARHVSGPDRLSRRIAQIGLVDAATGARLQAALKPGQRLVSLEGDLWRWDGFRAWAQDAPSAAA
MRLEQLNRLEALKQELAQVSARAEGARAAHGRLSQRLREVTEADRQAREARRAADQRMADAARAQSRAEA
ERNLAQGRLETLGLAVTRHKEDAMAARAQLREAEGGLADLGDLDTARASVEDIRHAVEAARITMLTHRST
HDEVRREGEARTKRSQEVTKDLSGWRHRLETAGKRIAELEERKAASEEELGEAMQVPGEIAEAREDLAEQ
TETAEARRAEAADRLASGETKHREAALAEREAARLASEAREGRAAAEARAEAARETMQAAAERIAEEQQV
TPNQLLSKLGVEPDAMPDSDALEAEVNRHKRQRDAMGAVNLRAEEDAREVQEEFDSLSKEKSDLEEAVKT
LRSGIASLNREGRERLLTAFEQVNSNFAMLFRHLFGGGEANLVMVESDDPLDAGLEIMCQPPGKKLSTLS
LLSGGEQTLTAMALIFAVFLANPAPICVLDEVDAPLDDANVTRFCDLLDEMCRQTDTRFLIITHHAVTMA
RMDRLFGVTMQEKGVSQLVSVDLKKAEALVA
>gi|56698061|ref|YP_168432.1| putative lipoprotein [Ruegeria pomeroyi DSS-3]
MRQSGPMLRLLSLIVLLAGCGGPGREFRGLPATRVDVGGSVFDVRVRGNLAEAIRVNPQYAPRFGPIRER
AGFAMAQVSGCRVVGVLGDQAVATGVLSCDGRPANWALPAAMLRFDCFEVDSWTSGDTEYTDFECTPY
>gi|56698062|ref|YP_168433.1| aminotransferase, classes I and II [Ruegeria pomeroyi DSS-3]
MSLEEIFATRAGRLKASEIRELLKLLDQPDILSFAGGIPDPALFPAEAFANAFAEVLTPAHQAQALQYSV
SEGYLPLRSWLADHMGTLGVPCGANNILITSGSQQALDYLGKLFLSPGDTALVGWPTYLGALAAFNAYEP
AYDRLHINTNRLPEDYRAAAEAAGGQVKMAYLSADFANPTGETVDEAGRERLLDLAETLDCAVIEDAAYQ
ALRYDGAPVPPILALEIARKGSIEACRTLYCGSFSKTLSPGLRVGWVVAPQAVIRQLVLMKQAADLHSST
INQIAIHRVAETLFDSHVASLRATYRRRRDAMLAALARHMPEGVDWTRPEGGMFVWLTLPQGMDGAALLA
RSLDTVRVAFVPGRAFFADGSGANTLRLSFSCASEEMIEEGMARLGQLLRAG
>gi|56698063|ref|YP_168434.1| pyruvate dehydrogenase complex repressor [Ruegeria pomeroyi DSS-3]
MPFQKVQPEKLSTSVVRQIEMLILQGILRPGERLPAERDLAERLGVSRPSLRDAVAELQDQGLLTAKAGS
GIYVAEVLGSAFSPALIRLFGTHDEAVFDYLSFRRDMEGLAAERAARLGSESDLKVIQAIYDKMETAHSR
QAADDEAQLDAQFHMAIIEASHNVVMLHMMRSMFELLRQGVFYNRRIMFHQRTTRTAILDQHCAINTALQ
ERNPEGARAAVEAHLNYVEQCLADQQKAERNEAVARQRLEHETGQG
>gi|56698064|ref|YP_168435.1| hypothetical protein SPO3232 [Ruegeria pomeroyi DSS-3]
MFVGHLPGAYLIFRVVTPRIERMAFTAAMLGAIAPDLDMLRFYFVDGRAFHHHEYLTHRPILWTGLLLCG
VLIGMRSRRIGVPLAFFGAGGLVHMLLDSIAGKIAWAWPVSDFAAPLVVVPATQSHWILSFLSHWTFAVE
LGITVLALVLWRWLPRRATARR
>gi|56698065|ref|YP_168436.1| F0F1 ATP synthase subunit B [Ruegeria pomeroyi DSS-3]
MRNILAPVLSLVLIAGVASPALAASGPFFSLKNTDFVVTIAFLVFIAVLFYFKVPSMIGGALDKRAEGIQ
SDLDEARKLREEAQSLLASFERKQKEMQGQADAIVAAAKEEAQRSAEQAKVDLEASIARRLAAAQDQIAS
AEAAAVKDVRDRAIAIAVAAAGDVIASSMTAAEANKLIDAGIADAGAKLH
>gi|56698066|ref|YP_168437.1| F0F1 ATP synthase subunit B' [Ruegeria pomeroyi DSS-3]
MATEQTGAVSTCVDSYGSAIGMPQLCFDWFPNQIFWLVITLVVVFLVLSRVALPRIAAILAERQGTITND
LAAAEDLKAKAAAAEEAYTKALADARAEAQRIAAEARAEIQAGLNDAIAKADAEIAAKAAESEKVIAGIR
AGALESIEAVAKDTAEALVDALGGKAEAASVAGAVDQRMKG
>gi|56698067|ref|YP_168438.1| F0F1 ATP synthase subunit C [Ruegeria pomeroyi DSS-3]
MEGDLAHIGAGLAAIGSGAAAIGVGNVAGNFLAGALRNPSAAASQTATLFIGIAFAEALGIFAFLVALLL
MFAV
>gi|56698068|ref|YP_168439.1| F0F1 ATP synthase subunit A [Ruegeria pomeroyi DSS-3]
MASEAQAADKAAEGGSLVFHPMDQFIVKPLFGDGAVGMFTITNSTLWMGLAVLAIIGLLVLSTSKRAIVP
GRMQSIAELAYGFIYKMVEDICGKDGVKYFPYVMTLFMFIVTANFLGLLPKSFTTTSHFAVTMVLALAVF
LTVTILGFVKNGAGFLSLFWVASAPLALRPILAIIELISYFVRPVSHSIRLAGNVMAGHAVIKVFAGFAA
IAAISPVSVLAITAMYGLEVLVAFIQAYVFTILTCVYLKDALHPHH
>gi|56698069|ref|YP_168440.1| ATP synthase F0, subunit I [Ruegeria pomeroyi DSS-3]
MPPVTEDDQKQRLTQLEARIEAAKKARETGTKRADASHAQGELAWRMVIEMVSGLGIGFGIGFGLDSLFG
TIPIFLVLFTLLGLAAGVNVMLRSAREIQAKTEADAAKATADRDERD
>gi|56698070|ref|YP_168441.1| ArsR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MSDPLDDVFSALADPTRRAILAMLLEDDMAVTDVAEPFEMSLAAISKHLMTLTRAGLITQEKRGRVKWCK
LEPNALRQASVWMQGFGQFEPVNLDAFERFLAAELGEDAQPGG
>gi|56698071|ref|YP_168442.1| integral membrane protein [Ruegeria pomeroyi DSS-3]
MGGLSPEGRGHLAMLCFSALVAGSFSLGSMVANEIAPAALNAVRFGIAAVVIGVAAAATTGIPRAALRAP
WRYLLLGGLFAAYFVLMFEGLKTAPPVSAAAVFTLTPVLSAVAGWLLLRQVTTPRMALALAVGAGGALWV
IFRADWAALWAFRIGQGEIVYFWGCVAHAIYTPLVRRLNRGEPAVVFTLGMLVAGCLLLTLYGWGDLRAT
DWATLPPIVWIGLLYVSICASAMTFVLLQFATLRLPSAKVMAYTYLTPTWVIGWEIALGNGAPGGLVLVG
IAMTVVALVMLLETPARRR
>gi|56698072|ref|YP_168443.1| LysR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MENWDEVRTAYQVARMGTVSGAAEVLGVHHATVIRHIDAIEARLGVKLFQRHARGYTPTEAGLDLLRVAQ
ATDDQFSQLVGRLKGVGDDVSGELVVTSLEALAPLVVPVLGAFQRKHPGLIVRYLTGARLFRLEYGEAHV
AIRAGRVPDQPDNVVQPFIDQEVGLYASRGYVARRGMLKGDADLKNHEFVGSDDENSRAPFHIWLRQNVP
AEAISFRCSDTYSAGHAVRAGAGIGFVSRWAAARDPDLIEMHPALEEWAGKLWLVTHVDLHRTPKVQTFL
KFLKQAAREWAV
>gi|56698073|ref|YP_168444.1| Asp/Glu/Hydantoin racemase family protein [Ruegeria pomeroyi DSS-3]
MKKIGILGGVGWPSTIDYYRAIAQGAGRFFAARGHGAPLPIPPMTIESVTQAHTRALRGTPGDEASWAAF
DAVFRNALLTLQGAGCDFAVIASNTPHVRLHAIRKGVDMTILSIFDATARATAETGATRALVLGTAVTMQ
ARNYADALTAHRVTANQTLPLEDIAEMQALIDEELNTGVSANARPRLLAYCDRHAEPGAAILLACTELPL
IFPDHVDDIVFRAGGHLFVNPSAAHVAAALDMALADES
>gi|56698074|ref|YP_168445.1| YbaK/prolyl-tRNA synthetase domain-containing protein [Ruegeria pomeroyi DSS-3]
MSGSPTMDASSAYQDTLPVSSDALLGQLDDWGLAYRLYTHVPLRTVEDAKAVEGELTRPGERAFRIKNLY
LRDKKKRNYLVTLEQDRAVDLKALGVALGAGNLSFGSSDRLMQHLGIRPGAVSPLAMITGVGQEVRLIMD
AAAREAEVIYMHPLVNDRTVAMARADLLAFLERIGCEVTWLDGSERA
>gi|56698075|ref|YP_168446.1| quinolinate synthetase [Ruegeria pomeroyi DSS-3]
MFDLPAMRANLADKYDLAPSPTLAAEMSAEYARMARVVTPADWAIHAPYVRAINQLKAERGAVILGHNYM
TPEIYHGISDFVGDSLQLAIEATRTDADVIVQCGVHFMAETSKILSPDKTVLMPDMEAGCSLAESITAEG
IAQMRAKYPGAPVVSYVNTTAEVKAASDICCTSSNAAQIVAALPEHTIIMTPDQYLAQNVAAQVPQKNVV
WWEGSCIVHEQYSARDLRDFREWNPGTRLIAHPECPPDVVAEADFSGSTSGIIDYVTREKPQKALLITEC
SMASNIADALPEVDFVGPCNMCPYMKKITLEKVLYALDTMTGQVEVDPEVARQARLAVQRMIDLSRQLGV
>gi|56698076|ref|YP_168447.1| L-aspartate oxidase [Ruegeria pomeroyi DSS-3]
MQDLRTDRVVIIGAGLAAIYAALKLAPHPVLMISPDPLGHGASSAWAQGGVAAAMDPADTPEAHARDTLR
AGAGTVLQEVADYVTRAARAHILDLTDLGTAFDRTRDGGYVMSREAAHSAARVVRVKGDQAGAEIMRALI
AELRQTRSVQVLEGAQVTRLLVEAGRVSGVCLTSAAPEGSAPVTLRAPAVLLAAGGAAGLYAQTTNPARI
RGQALGMAARAGARIADGEFVQFHPTAIATGADPAPLATEALRGEGAILIDRHGQRFMPALHPDAELAPR
DVVARAVYLQTQAGNAPALDTRAAIGAHLPTLFPAVAQACAEAGIDPLSAPIPVAAAAHYHMGGVAADLD
GKCSLPGLWVCGEAASTGLHGANRLASNGLLEALVFARACARDIARQVRQTVAARVDISFAPGGDAPDAQ
TVAELRRIMTDHVGVVRDVDGLRRALRAIAQIEGAHPPCDALANMTATATMIAAAALMRQESRGAHYRTD
FPQAAPGPGQRSDLTLEQALTLRNTL
>gi|56698077|ref|YP_168448.1| nicotinate-nucleotide pyrophosphorylase [Ruegeria pomeroyi DSS-3]
MTQGPAMTHAPLPDLILEPLVRAALMEDLGTYGDITTRTVIAPGTRYCARLNARAAATVSGMQIAALAFR
LVDPALRVETLVADGQTCAAGDTLMVIEGEAAAILSAERVALNFVGRLCGIATLTAALVAETHGTNARIT
CTRKTTPGLRLVEKQAVLHGGGFNHRYSLSDAILIKDNHIAAAGGIRPVLEATRARASHMVKVEIEVDRL
DQLEEVLAVGGADAVLLDNMDTETLARAVRMAKGRLITEASGNVTLDTVAAIAATGVDYISSGALTHSYR
TVDLGLDF
>gi|56698078|ref|YP_168449.1| signal recognition particle protein [Ruegeria pomeroyi DSS-3]
MFENLSERLSGVFDRLTKQGALSEEDVKTALREVRVALLEADVSLPVARDFVKAVQDKATGQAVTKSVTP
GQQVVKIVHDTLVDVLRGAEDPGKLKIDNPPAPILMVGLQGGGKTTTTAKLAKRLKEREGKKVLMASLDV
YRPAAMDQLAVLGAQIGVDTLPIVPGQKPVDIAKRAKQQAMMGGYDVYMLDTAGRLHIDQVLMQEVEDVR
NVVTPRETLLVVDGLTGQVAVEVAEEFDAKIGISGVVLTRMDGDGRGGAALSMRAVTGKPIRFVGLGEKM
DALETFEPERIAGRILGMGDIVALVEKAQETIEMEQAERMMKRMAKGQFNMNDLKMQLEQMIQMGGMQGM
MGMLPGMGKMAKQMDAAGLDDRVLKQQIALIQSMTKKERANPALLQASRKKRIAAGSGMEVSDLNKLLKM
HRQMADMMKKMGKMGKGGMLKQAMKGMFGKGGTPADMAEMAKGMDPKALEAAAKAMGGGKGLGGGLPGGL
PGLGGGMGLPPGLSGLGKKK
>gi|56698079|ref|YP_168450.1| acetyltransferase [Ruegeria pomeroyi DSS-3]
MTPIPTISTERLTLRAPEQRDFPGFAAFFASERSKFVGGPVPAEQSWRMLAVELGHWQLRGYGRWAVEET
ATGRFAGIIGLWNPEGWPEPEIGWDLMDGFEGKGYATEAARAARDYAYDVLGWPTAISLVAPGNDGSRRV
AQRLGATQDGLFTHERFGTLEIWRHPAPSELSDGGMEAYA
>gi|56698080|ref|YP_168451.1| acetyltransferase [Ruegeria pomeroyi DSS-3]
MIDLQIPTLTTDRLILRAPEARDFEGVATFFADAERSWGFGGPLSRNEAWRWFASMIGHWVLHGYGFWMV
DTREGEPVGFVGIWSPEGWPEPELGWVVYQGAEGKGYAREAAEEIRRYAYAVLGFETLSSNIIPGNARSV
ALAERMGAQYERSFENVTHGTEMVYRHPGPDDLAEGAA
>gi|56698081|ref|YP_168452.1| acetyltransferase [Ruegeria pomeroyi DSS-3]
MSIPTLHTERLTLRAPQLADFEHWAAFFASPRAVHERGMMDRAAAWRVWASDVAIWTLRGYGPFGVELRD
TGTYVGEVGIYEPDGYPGPELGWFVIPEAEGKGYAAEAARAVMIWARRNFGWDQLTNIIDPANQRSIALG
LRLGGVIDPDGIGEDPGDVVIAHDLRGLA
>gi|56698082|ref|YP_168453.1| acetyltransferase [Ruegeria pomeroyi DSS-3]
MTLSIPVIETERLILRGPRESDFEAFAAFGASDRSRFVGGPFPRFRSWGGFLATYGHWALRGYGMWMVEE
RATGATAGRIGFIFNDGWDEPELGWHIFDGFEGKGYAYQAASAARAHGAQHFGLDGVISYIDPANTRSLR
LAERLGAQYERDGEVAGHPCQVWRHPHQGAAA
>gi|56698083|ref|YP_168454.1| hypothetical protein SPO3251 [Ruegeria pomeroyi DSS-3]
MTHTIPVIETRRLILRGPEPEDYPDFKSTFTSYRARFMGGPLNPYEAWMLYAAEIGHWQIRGYGMWMIHD
KVTDETYGMAGGWKPAKWPEAEIAWVIWPDAAGKGYALEATHAARKHFYRYLGWETAVSYIDPKNLDSIR
LAERLGAKKDPEAPTIDGNDAVYRHPSPAKLDGTQLAHGIDMEIAHYADPLFKPKGWAID
>gi|56698084|ref|YP_168455.1| chorismate mutase [Ruegeria pomeroyi DSS-3]
MPDPVARAAELLKGHRASIDRLDAILVYTLGERFKHTQAVGKLKAEHDLPPSDPVREAQQIERLEDLAKE
ADLDPDFAKAFLNFIIQEVIRHHRKHQE
>gi|56698085|ref|YP_168456.1| 30S ribosomal protein S16 [Ruegeria pomeroyi DSS-3]
MAMKIRLARGGSKKRPFYRIVAADSRMPRDGRFIEKLGTYNPLLPKDSEERVKMDVERVQYWLSQGAQTT
DRVARMLEAAGVVGKTERSNPNKAVPGKKAKERAEEKAAKAAAATEAAAEE
>gi|56698086|ref|YP_168457.1| cobalamin biosynthesis protein BluB [Ruegeria pomeroyi DSS-3]
MRDQSFSDDFRTQFDLLMRLRRDVRRFRTDPVDEAVLTRCLDTFRLAPSVGLSEPWRVIRVESDAARAAA
LENYQSANGEALKGYSGERAQQYSQLKLSGMQEAPVQLAVFCDDATAKGHGLGAGTMPEMRRYSVVSAIT
LFWLMLRAEGLGLGWVSILDPDRLCRDLRAPETWRLIGYFCIGWPQECSDIPELETAGWEVRDRRLTVEI
R
>gi|56698087|ref|YP_168458.1| 16S rRNA-processing protein RimM [Ruegeria pomeroyi DSS-3]
MSDLICVGSVAGSFGVRGEVRLKSFCAVPEDIEMYSPLTDESGTARYPIVLTRAIKNGFAAHLGGVETKE
EADALKGLRLYTQRDRLPSLPDDEFYHTDLIGLEVFDTGGTLLGKVISVQNHGAADLLEIGGAGLKSPVL
LPFTQAAVPTVDLEQRRIVADPPEGLF
>gi|56698088|ref|YP_168459.1| 50S ribosomal protein L31 [Ruegeria pomeroyi DSS-3]
MKKDIHPDYHMIDVKLTDGTVIQMKSTWGKEGDTLSLEIDPSSHPAWTGGSSRLMDTGGRVSKFKKKYEG
LGF
>gi|56698089|ref|YP_168460.1| 50S ribosomal protein L19 [Ruegeria pomeroyi DSS-3]
MDLIAQLEAEQIAALGKDIPDFKAGDTIRVGYKVTEGTRSRVQNYEGVCISRKNGSGIAGSFTVRKISFG
EGVERVFPLYSTNIDSITVVRRGRVRRAKLYYLRARRGKSARIAEVANYKPKADAEA
>gi|56698090|ref|YP_168461.1| glycosy hydrolase family protein [Ruegeria pomeroyi DSS-3]
MRPLILLFVLLSLMAACGRRAPEPEPVPAPDPMRAELAQLVTYPKFGDADPHPWDGRAPQSYPIHGIDIS
RWQGNIDWATARAAGVNFAFIKATEGGDVADPKFAEHRRGAQAAGVPWGAYHYYYFCRPAEEQARWFIRH
VPRGADLPHVLDMEWTHRSRTCPLRPEGAKVRAEARKFLDLLEAHYGRRPIIYTTVDFYRDTGIGQLRDT
EFWLRSVAGHPRQVYPGAYWTFWQYTGTGLVPGIEGKVDINVFRSAPDIWLRWKAGQIG
>gi|56698091|ref|YP_168462.1| tRNA (guanine-N1)-methyltransferase [Ruegeria pomeroyi DSS-3]
MTPTPELHGVWQARIITLFPQAFPGVLGESLTGKALQDGLWQLHTTDLRRFGVGKHRNVDDTPAGGGAGM
VLRPDVLGAAIEATMQGTSSNWPLIYLSPRGRPMDQALMQSLARCDGVTLLCGRFEGVDERVLEHYGIQE
VSLGDFVMTGGEIAAQALIDATVRLLPGVLGNQASTEEESFSSGLLEHPQYTRPAEWMGRPIPEVLMSGH
HGKVAEWRRAQSEEITRRRRPDLWQRHQATKDD
>gi|56698092|ref|YP_168463.1| methyltransferase,-like protein [Ruegeria pomeroyi DSS-3]
MRFRERRFYMFYGKLQGENGDRFRAALQTMQELFGSVYASDNLIGLQRAGGFREDKKFVETLRRNAQTQQ
ELSIAWRLHTLLWAAQNVMHLPGDFVECGVWKGFCFAFLTDYLDFAKSDKTLYLYDTYQGIPEAMNSEKR
SNQVYEKDIAQDPNAILKVVQQRFANVPNARIVQGMVPDSFAEACPERIALLHIDMNSAASEIAALEALF
DKVVPGGMIVFDDYGWTGYAAQRHAENAFMAARGHTVLEIPTGQGLVIKH
>gi|56698093|ref|YP_168464.1| glutathione S-transferase family protein [Ruegeria pomeroyi DSS-3]
MTLHLMSHALCPYVQRAAISMLEKGVSFERTDIDLAKKPEWFLAISPLGKTPVLLDNQQAIFESTAILEY
LEDTQSPPLHSKAAITRAQHRGWIEFGSSILNDIAGLYNAQTEDAFDQKTAALEAKFAQLERQLGEGAFF
AGNAFTLVDTVFAPIFRYFDTFDEIADFGILLGKEKVAAWRKELAARPSVKQAVSANYPSLLRVFLLNRN
SHLSQLMKRQLS
>gi|56698094|ref|YP_168465.1| MarR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MTPSEQTTRAWTSLLSVGQALLGDIEAELQTHGLPKLSWYDALFEIEKAGADGIRPYELKERLLLPQYGT
SRLLDRIAKAGLVTREDVIGDGRGQIIRLTPKGIETRKEMWPIYAEMLIKSVQQKLSQPELDELVRLLGK
LASTNKLRSSIP
>gi|56698095|ref|YP_168466.1| hypothetical protein SPO3263 [Ruegeria pomeroyi DSS-3]
MSKGSYPPIDAARENLWLRESACRLQLYPRSKLPLGWVGDAASRGEISEELQERLSWIGVSVAVTLIGFS
TLMLGTFSRFGLWPQLIAAFAGLIALEGMRSTATAFVGSHPGLWWVQHAPALGGIALSILFLKLAGRPLR
LRRYPDTGSV
>gi|56698096|ref|YP_168467.1| putative sulfite oxidase subunit YedZ [Ruegeria pomeroyi DSS-3]
MERVNASLRRIPVWLIYMTGALPPPVWLWMGATGLLGVDPAKAIEHRLGELALQALILGLAVTPMRRLLG
VNLIKFRRAIGVLAFYYVSCHLLIWLVLDVQIPAQIWADILKRPYITIGMAGFALLLPLALTSNNWSVRR
LGPAWRQLHRLVYAAVLLGAVHFLMLVKGFQIEPLVYLGLVVILLALRLPVARRRLAL
>gi|56698097|ref|YP_168468.1| putative sulfite oxidase subunit YedY [Ruegeria pomeroyi DSS-3]
MAHRWINDLTPADITPRGAWMNRRQVMAGMAGAGLAAFAGSAQAETLEPNSWEEITSYNNFYEFGTGKDD
PAAYAHLLKTVPWSIKIDGMVERPGDYDFQDILSEMTIEERIYRFRCVEAWSMVIPWNGFELADLLAMAG
VQEGAKYVAFETLYRPEEMPGTRYPVLEWPYREGLRLDEAMHPLTLMATGIYGKPLPNQNGAPLRLVVPW
KYGFKSIKSIVRITLTDREPPASWNMAIPNEYGFYSNVNPEVNHPRWSQASERRIGGGLFAKRQPTLMFN
GYEKEVAGLYQGMDLAKYF
>gi|56698098|ref|YP_168469.1| glutamate synthase family protein [Ruegeria pomeroyi DSS-3]
MRHINIYRSFRMGFAYNAIEVMAFVFVSVIGLMMLTAVVLFIVDRFQTGDAIRRNYPVIGRFRNIFTELG
EFFRQYFFAMDREEMPFNRAQRNWVYNASEAKGNTVAFGSTRNLNIPGTPIFMNAPFPPLDDQFGASEPL
VIGPTCRQPYSAPSIFNISGMSYGAISKPAVLALSKGAKAAGVWMNTGEGGLSPYHLEGGADIVFQIGTA
KFGVRDAEGNLSDDKLREVAAHPQVKMFEIKLSQGAKPGKGGILPAAKIDAEISQIRGVPMGMDAISPNR
HREVDDFDGLLDLIAHLREVTGKPVGIKTCMGSADPWFDFFRRIRERGADSAPDFITVDGGEGGTGAAPM
PLIDLVGLPLREALIRMVDLRDLSGLHDRIRIVASGKLVAPGDVAWAICLGADFITSARGFMFSLGCIQA
LKCNKNTCPTGITTHIPSLQKGLVVHEKEKRVAAYARSVIHEVETIAHSVGVPEPRLMRRRHVRIVCDDG
TSVQMDDLYPSVKSDAEGLDRARGNRQFEDGLRRLGVV
>gi|56698099|ref|YP_168470.1| hypothetical protein SPO3273 [Ruegeria pomeroyi DSS-3]
MRKLLYILMWRKAAVLFPIQTEGEPLAVQPTRPLWERAMKQMLLGAVIALTAGAATAQDAVTYTTTDTFE
DVTFGLESAIVGRGLVIDSVSHVGEMLERTRADVGSDVVLFDHAEVFSFCSAALSRKVMEADPMNVVFCP
YGIFVMQQPGSDAITIGFRQFPEGPMQEVQSLLDNIVREAIGE
>gi|56698100|ref|YP_168471.1| hypothetical protein SPO3274 [Ruegeria pomeroyi DSS-3]
MGVFMRIPCTRQECAMTRVPPFIITALLASMTGAVALAGNESRSIAYSLPGGLIEVVADFSENSIYWCGA
GDHALNKMRKPGNQRLYVWKGPSPSIAQPGGRAVTFGFTPPPQGASPALTNDVGIIGNTLSVSQAKKTCD
ERTSSG
>gi|56698101|ref|YP_168472.1| hypothetical protein SPO3275 [Ruegeria pomeroyi DSS-3]
MCFSATASFVAGAALIAGGTVAIRKSADLGPRFLGFAVFPFFFGVQQLSEGLLWLTLDGPGPVAPGAAAL
VFLFFAYWFWPLWVPLSSALVEPDPFRRRIFWGLSAFGFSLGAVLFLPVLARPETLDIYLVKHSIQYENP
SMFPGETAKIVARLIYAVVICPPLVGSSHPQIRIFGWLILASVVAGFVFAAYAFTSIWCFLAAIISGYIV
YMMTAIGREDALVDPSRRNLS
>gi|56698102|ref|YP_168473.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Ruegeria pomeroyi DSS-3]
MDLSKFTERARGFVQAAQTIALREGHQRLAPEHILKALMDDDQGLASNLIARAGGASKRVVEALDVALSK
IPKVSGDAAQVYLDGQTVKVLDEAEKVAKKAGDSFVPVERVLMALCMVKSKAKEALDAGEVTAQKLNEAI
NDIRKGRTADSASAEEGYDALKKYARDLTEAAAEGKIDPIIGRDEEIRRSMQVLSRRTKNNPVLIGEPGV
GKTAIAEGMALRIVNGDVPESLRDKKLLALDMGALIAGAKYRGEFEERLKAVLTEVTEAAGEIILFIDEM
HTLVGAGKSDGAMDAANLIKPALARGELHCIGATTLDEYRKYVEKDAALARRFQPVLVEEPTVEDTISIL
RGIKEKYELHHGVDISDSALVAAATLSHRYITDRFLPDKAIDLMDEAASRLRMEVDSKPEALDQLDRQIL
QLQIEEEALKKENDAASQDRLATLQKDLAELQEKSAEMTAQWQASRDKMNAAQSVKEQLERARAELEIAK
REGNLARAGELSYGIIPELEKQREEAEAGEDTGLKAEEVVRPEQIAAVVERWTGIPTSKMLEGEREKLLR
MEDELHKRVIGQGTAVTAVANAVRRARAGLNDENRPLGSFLFLGPTGVGKTELTKAVANYLFDDDNAMVR
IDMSEFMEKHAVARLIGAPPGYVGYDEGGVLTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGVLTD
GQGRTVDFKQTLIVLTSNLGSQALSQLPEGADSAQARRDVMDAVRAHFRPEFLNRLDETIIFDRLKRADM
DGIVTIQLGRLAKRLAQRKIVLELDEPARKWLADAGYDPVYGARPLKRVIQRDLQNPLAEKLLAGEIKDG
DTVAITAREEGLVIGDRVVSSSRPRPDDAVVH
>gi|56698103|ref|YP_168474.1| hypothetical protein SPO3277 [Ruegeria pomeroyi DSS-3]
MEAPMQITNVEISQYQVCPNTARHSASVCMTLADRVVTLFCSLELPEGISAIARAQAFVGDAMRQLRRMP
EFRSGKQQLSLDDQALPAVA
>gi|56698104|ref|YP_168475.1| orotidine 5'-phosphate decarboxylase [Ruegeria pomeroyi DSS-3]
MTDRMLADDRLIVALDVPNAVAGLALAERLGDAVSFYKIGLGMLTGGGLALANELKQEHGKRIFLDMKLF
DIGNTVEAAVRGLSQFDLDFLTVHGDPHVVRAAKEGAAGKDLKILAVTILTSLNRDDLDASLIKPGDVHD
LVLERAARAFEAGADGVIASPQEAAAIRALPEAAGRLIVTPGIRPAGADLGDQKRVATPANAIADGVDHI
VVGRPVVHAPDPRAAALSILAEMTSPQAVAPNRS
>gi|56698105|ref|YP_168476.1| NUDIX domain-containing protein [Ruegeria pomeroyi DSS-3]
MTQTASAFSGAKLALFLGAELLVIRRDDRPDIPFPDHWDLPGGGREGDESPLDCALRETREEVGLSVPAD
RVGWSLSYLRPMGRMWFFTAHLPAGYVDQIRFGNEGQGWRLMAPTDYVRHARAVPHFAEHLRLYLGSSDY
NQARSGGER
>gi|56698106|ref|YP_168477.1| DNA polymerase IV [Ruegeria pomeroyi DSS-3]
MTAASGLCRDCFSRTGSARRCPSCGSPRVLRHPELDSLTIAHMDCDAFYASVEKRDNPDLADKPVIIGGG
KRGVVSTACYVARIRGVRSAMPMFQALKLCPEAVVIKPRMSVYAEVSKQIRALMDELTPVVEPLSLDEAF
MDLSGTQRLHGHPPAVMLARLVKRMKDELGVTGSIGLSHNKFLAKVASDLEKPRGFSVIGRAETAEFLRD
KPVRLIWGIGPAAQESLERAGIRTFTDLLRWEQEALVARFGAMGQRLWHLARGEDRRRVSAHDPIKSISN
ETTFFEDTGDADVLDGHIWRMAEKVADRAKARGLAGRVVTLKLKRANHRVLSRQQSLRDPTQMADRIYRT
ARALFDQLGDQGPYRLLGCGLSHLCPETEADVSGDLLDPQAAQRARAERATDAIRKRFGADAILKGRGMR
>gi|56698107|ref|YP_168478.1| DinB family protein [Ruegeria pomeroyi DSS-3]
MISAEFCRVMARYNSWQNKSLITAAEALTHAARWQERGAFFGSIAATLNHLYWADALILARLTGNERPQD
TIRHSLTDPADWQDYKTRRQHRDREIESWADGLKDADLNGTLAWYQADGATRITASGALCAAQLFNHQTH
HRGQVHAMLTAAGAKPGVTDLTALT
>gi|56698108|ref|YP_168479.1| N-formylglutamate amidohydrolase family protein [Ruegeria pomeroyi DSS-3]
MTNTAYHLTLPAARTSSVVFASPHSGARYDPPFLAQTVLDDHAIRSSEDAFVDQLFDCAPEFGAPLLRAA
APRAYLDLNRSCEELDPALIEGVRKGGHNPRVASGLGVIPRVVAGGRAIYRGKLSRAEAEQRLQAIWHPY
HARLQHLLNEAHAAFGQAILIDCHSMPREALENSVGKAAGKPDVVLGDRFGASASPEIVDRVEAAFTAAG
LHVVRNTPFAGAYVTQAYGRPSRRQHAIQIEIDRGLYMHEATIRPNGNFSAMRELLRDVVAEICGFASLP
LRLAAE
>gi|161598429|ref|YP_168480.2| 50S ribosomal protein L36 [Ruegeria pomeroyi DSS-3]
MKVRNSLRSLKSRHRDCRVVRRKGRVYVINKTQRKFKARQG
>gi|56698109|ref|YP_168481.1| hypothetical protein SPO3285 [Ruegeria pomeroyi DSS-3]
MNGWDMVVRFLVFALALICGQSLLAAPSAETIRASLLAHDFDMLTADLEASQAAFDAGDISDEDLRRLFE
VFTSSSPDVIEAVAEWERKSPDLPYATTARGWSLYITASRIRGEDFARDPYPEALRLHREMLERAFLLAM
RAYGMDPSLIPASDLIIALGNSTSRQEQALVVVERVMSEQPNAGTLRRAIWLAHPGWGGSSELADALCAF
FGPNASPNGADLTRQCITYASREIFGHRMEEIRTWMKEDPDPWYDYYRVWATLFDKSPNAEDLAFAHRYF
QDSEVRDLRLSKMFDQRYSMRPGLSPVHHLVLERSKDWARAVLETDPYELSALDVLLSDTVRVTKGADNN
WMFTPSGSPTRDERLDYMRRRLYAAPYNPDFWEDYARFLNNENKQAGYPVEGIFATDTLMINAIVYSKHR
PDWLGDFVERKFKQLEFLEWITGQGKPDWDRFIAETDRNAQIICPLIRANRLFDAMRLAGLENRRHKDLS
VFKQQKLRAETERAASEGQCENERLAPIEALWFTPVEVDLAAMG
>gi|56698110|ref|YP_168482.1| arylsulfatase [Ruegeria pomeroyi DSS-3]
MSRKPNIILILADDLGFADLGCTGSEIRTPNIDGLARDGALLTAMYNCARCCPTRASLLTGLYPHNAGIG
HMGADLGTPAYRGFLRNDCATIAEHLRAAGYRTCMSGKWHVGGDFMAREVDSWRVGDVDHPTPRQRGFDR
FYGIVDGVTHFFSPHYMLEDDTRVETFPDDFYFTDAITDKAIGMVEEAVEMEQPFFLYLAHTAPHWPLHA
HPEDIARYDGVYGRGWDALRSSRHETMNAMGLFQTNWQISPRDADVCPWEAAPHKDWEARKMATYAAMVD
RMDQSIGTLLAALKRMGQFDNTLILFLSDNGGCAEFMAEDGWAKFFPDTTHDGRHIEMGNRPEIMPGSAL
TYQSYDKPWANVSNAPFRKFKHYVHEGGISTPLIAHWPGRIAAPVPLHAACHVVDILPTILEAAGAPPIA
ELGGHGMQPLQGESLLGLLRGKKWEREQPIFFEHEGNSAIRLGQFKLVRLHGQDWELYDIEADRTELNDL
IRGEPDRAKALVAEYQDWADKTGVLDWNIALPRLLAAWQMDNAEG
>gi|56698111|ref|YP_168483.1| ferric iron ABC transporter, periplasmic ferric iron-binding protein [Ruegeria pomeroyi DSS-3]
MTISVGLTESRETPMLKTTTAIALALIATSAIAEGELNLYSSRHYDTDERLYTDFEEATGIRINRIEGKA
DELIARMQAEGANSPADVLLTVDTSRLARAKEAGLLQAIDSAVLEDRIPANLQDSDNQWFGFSQRARLYF
YDKAGVSAPPATYLDLADPAYKGQVCIRSSTNTYNQTLLAAIITHHGEDVARDWAESVVANMAREPQGGD
TDQLRGIVSGECGIAVSNSYYFARALRSDVKGLSGEIDKIGIAFPSQDAEGAHMNLSGGGVAAHAPNRDN
AVKFLEYLASDQAQVYFSNGNDEYPAVTGVDLADNVAALGEFKADEVNLSEVAANIPMAQKIFNEVGWK
>gi|56698112|ref|YP_168484.1| ferric iron ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MEPQNPPGPAMADTRYAAHGSRRRLSSGTRLLGGLAFAIAAACLLPMVAVALAALTGGTDTLAHLLETVL
PGYAATTLLLVALVAAGTFAVGVGAAWLVTMTRFPGVRLLEIALVLPLAFPAYVLAYAYTFVLDHPGVVQ
TTLRQVTGWGPRDYWFPEIRSTEGAAVMLILVLYPYVYLLARAAFLQQSASAFLAARALGTGPWVAFWRV
SLPMARPAIAGGVLLAVMETIADFGTVAYFGVQTFATGIYTSWFSMADRAAAAQLALCLLGFALLLAVAE
RTQRGKARYYQSGRRHAALPAGELKGWQAAGAFTLCAVPVVLGFVLPVVILVQMGLESEQNLLSRRYVGF
IRNSLTLAGTAAVVTVTAAICVGFFQRLRPGRRSDGAAYLARLGYAVPGGVIAVGLIVPFAAFDNALDAW
MRAQFGLSTGLLITGSIWLLIAAYMVRFLAAALGAYEGGQSMVHANMDAAARSLGQGPLGTLRRIHLPIL
TPSLMTALLIVFVDVMKELPATLIMRPFNFDTLAVQAYRLASDERLEGAAVPSLVILAMGLLPVILICRQ
VGRGR
>gi|56698113|ref|YP_168485.1| phenylacetate-CoA ligase, putative [Ruegeria pomeroyi DSS-3]
MTHFDPLETRTDDQRAADLASALPQQIARAKTAPGFARLLADVDPAAITDAAALATLPVLRKSELSRAQG
EHPPFGGFTVKPAHGFAHVFQSPGPIYEPGGTDHDWWRMGRFLHAAGIGQGDIVQNCFGYHLTPAGMIFE
NGARAVGAAVLPAGTGQTELQVTAARDIGCTAYAGTPDYLKVILDKAEEMGVALKFTKAAVGGGALFPSL
RKEYADRGISCLQCYATADLGNIAYESAAMEGMIVDEHVIVEIVTPGTGTPVAPGEVGEVVVTSLNPDYP
LIRFATGDMSAVLPGHSPCGRTNMRIKGWMGRADQTTKIKGMFVRPEQVAALVDKHAEIVKARVIATRVG
EMDAMTVQIESSGGDDAAYARSVAEVLKLKGAIEVVAPGSLPKDGLVIEDQRRYD
>gi|56698114|ref|YP_168486.1| branched-chain amino acid ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MLDAAKTTDTQVETLLEVNNIEVIYNHVILVLKGVSLTVPKGGITALLGGNGAGKTTTLKAVSNLLHSER
GEVTKGSVKYRGETIHELDPAALVTKGVIQVMEGRHCFEHLTVEENLLTGAYTRKDGSANIQRDLELVYN
YFPRLKERRRSQAGYTSGGEQQMVAMGRALMSRPETILLDEPSMGLAPQLVEEIFEIVRDLNEKEGVSFL
LAEQNTNVALRYAHYGYILESGRVVMDGPAKELRENPDVKEFYLGMSDDGRKSFRDVRSYRRRKRWLS
>gi|56698115|ref|YP_168487.1| branched-chain amino acid ABC transporter, periplasmic branched-chain amino acid binding protein, putative [Ruegeria pomeroyi DSS-3]
MKMKLATVALGALMAAGPALADLTFPSLSYRTGPYAAGGIPFADGYADYFTLLNERDGGIGGVKANVLEC
ETGYNTEKGVECYESTKGQGALVYQPLSTGITYQLIPKATADGIAIHSMGYGRTSAKNGNVFSHVFNYPA
NYWDGASGAVNYLLEINGGDIKGKKIALVYHNSAYGKEPIRTLEELSKKHGFDLSTLPVDHPGQEQKSQW
LQIRRDKPDYVLMWGWGVMNQVAVQEAANIRFPMENFIGIWWSGSENDVLPAGDAANGYKALTFHNVGTA
FPLFDDLQKYVIDAGKAAGAGDQVGTVLYNRGLYAAMLAAEAAKKAQEISGKADITAADMRDGMEALEMT
EAKMAELGLPNFGPTFSVSCGNHGGDALVGVTQWDATSKTWSLISDFKPTDGDVIGALIEEDSSAYASEN
NISPRCN
>gi|56698116|ref|YP_168488.1| branched-chain amino acid ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MFYREAGDFKTSYQADSQTFPIKFDRYRYYVVLAVAFGIIPFIINDYWANALLIPFLIYAIAAIGLNILV
GYCGQVSLGTGGFMAVGAYACYKLMTAFPEVSMFIHVILAGGITAAVGVLFGLPSLRIKGFYLAVATLAA
QFFLVWLFNRVPWFYNYSASGQINAPERDTFGIIITGPNAPAWATYLFCLVFLTACALIARNLTRGTMGR
TWMAIRDMDIAAEIIGVNPLKAKMTAFAVSSFFIGISGALFFALYLGAVEVGEAFGIQKSFLVLFMVIIG
GLGSIFGSFAGAAFLVLLPVVLKVVGADMLGWPTDIVAHLQLVIVGGLIVVFLIMEPHGLAQLWRVAKEK
LRLWPFPH
>gi|56698117|ref|YP_168489.1| hypothetical protein SPO3293 [Ruegeria pomeroyi DSS-3]
MNKLIAIVNVVAWSGFWAFGYIALTAQDLSERQLIIASLLAFAGFIMGIVAYLRLVRAAEASGYAKKTNQ
LDAAARNRAQSEGGM
>gi|56698118|ref|YP_168490.1| branched-chain amino acid ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MSDQLIFGIEVILNGLMAGVLYALVALGFVLIYKASGIFNYAQGVMALFAAMTLVGIMNGQVPFSHLINA
VFGGHITHFGWNVPGFVAILLTMAVMVLLAWAVQQFVMRHLVGQEPIILFMATIGLAYFLEGVADLMWGS
EIKTLDVGLPQGLNVWIDDTTYGIFGYGFFIDNLDIVATVIAALLVAALVAFSQYTKQGRAMRAVADDHQ
AALSVGISLNFIWVLVWSVAGFVALVAGIMWGTKSGVQFSLSLIALKALPVLMLGGFTSIPGAIVGGLII
GVGEKLFEFAIGPMVGGATENWFAYVLALIFLVFRPQGLFGEKIIERV
>gi|56698119|ref|YP_168491.1| branched-chain amino acid ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MGASPRPPSRQPGHCRKTRETPMLDASEGYTTADGRKIGGVVMEMKNITLRFGGVVAIKDISFDIREGEI
RAIIGPNGAGKSSMLNVISGFYVPQEGEVWFHGKKRPGMRPYEVARQGIARTFQNIALFEGMSVLDNVMT
GRLNYMKTGLLSQAIWKGKAEREEVENREAVEKIIDFLEIQHIRKTPVSRLPYGLKKRVELARALAAEPK
LLLLDEPMAGMNVEEKEDMSRFILDVNDEFGTTIALIEHDMGVVMDLSDRVVVMDYGKKIGDGTPEEVRN
NQEVIDAYLGVAHD
>gi|56698120|ref|YP_168492.1| AMP-binding enzyme [Ruegeria pomeroyi DSS-3]
MAQTQSGAEGLQSLPALLHRNATQYGNHPAYREKEFGIWQCWTWAEVAAEIRAMALGFLELGVAKGDHVA
VIGRNRPAHYWSMVAAQMVGAVPVPFYQDAVAEEMAYVMEHCGAKFIVCGDQEQVDKVIEIQETVNQVQQ
ILYTDKRGMRKYDHSQMNALEDVMAEGRAGHYRFDAELDRRIAEITYDDTCVMLYTSGTTGKPKGVVLSN
RNVIESAKNSAKFDNLTKDENILSYLPMAWVGDFIFSIGQAYWCGFCVNCPESPDTMMTDLREIGPTYFF
APPRVFETQLTNVMIRMEDASTLKRNMFHHFMAHAKKVGGKILDGEQVSAGDRLKYAIGNALVYGPLKDT
LGFGNVRVGYTAGEAIGPEIFDFYRSLGINLKQLYGQTEATVFITVQPDGQVRADTVGVPAPDVEIKIAE
NGEIFYRSPGTFVEYYKNPESTASTKDAEGWVATGDAGFFEEDTGHLRIIDRAKDVGKMADGSMFAPKYV
ENKLKFYPDILEAVLFGNGKDRCVAFINIDLTAVGNWAERNNIAYASYQELAGHPKVLDTIRSHVEKVNV
SVAEDPMLSGCQVHRFVVLHKELDADDGEMTRTRKVRRRIVEEKFADIIAALYDGSEKVSTVTEVTYEDG
RKGAIKATLTICDAKVMPTAPQQVAAE
>gi|56698121|ref|YP_168493.1| sensory box histidine kinase/response regulator [Ruegeria pomeroyi DSS-3]
MDRNDQWIKAMTSAGLNLIAQGLSIYDNNLRLAVSNRRFREMFHLPDRLIRPGARFDDTIRYIAERGDYG
PVEDIDALVRSRVEQALAFVPHYFERIRANGQVISIEGAPLPQGGWVTVYTDITRTKRIEELLRARSEEL
SGQLLAHAEELGATNRKLAATISALEEAQRQLTEIEARTRLTTEMMPAHIAHVDRDGHYTYSNRRLSAVM
PGRPSDILGLHISDALGPDAFSKIGPHLEAAYGGDSPVFEFNEAHDSRRIRVAFTPDGAGGVYILSMDVT
SETQARVALQQSRRRAMAAQMTSGLAHDFSNLLTIILGMMSKMEKMGLPEEAAELISATQATAQRGGRLL
NRIADMTGNRTLRPRATDMHGLLEDLKLLATPSLPRGIGLSVLDHTPDEALMLDAGMLQDALLNLVLNAR
DACGANGQITISAHAISRIWIEIAVTDTGPGFSKEALGKALNPFFTTKGSEGSGLGLPMVYDMVKLAGGD
MRVANTATGAAVTLRLPYRAAPQAQGGLALLVEDNEDLRATFRDMLVDLGHTVIEATSADEASALAADIE
DIALVLSDIRLEGDATGIDLLKRLPKSLPCILMTSLPLSDPLHREALARGPVLRKPFTRAQLAALLRPEE
GS
>gi|56698122|ref|YP_168494.1| DNA-binding response regulator [Ruegeria pomeroyi DSS-3]
MTAPLVTILDDEPEIRLILTEALAEAGFRTQSFSRAREFEASLKRVTPDVCLVDLSLPDTDGLALVHRLA
LEQGAAVIIISGRAQVQDRVTGLELGADDYITKPFDPAEVVARIRARLRDGQRGPVSSGGDTAEFNGWTA
HFDRYALEDDTGAETPFSHAEGEVLRLFLESPKRLISRAQMQEALGSGAGDSFDRAMDVRISRLRTKLRE
DPKNPRLIKTIYGAGYIFLGDVSWR
>gi|56698123|ref|YP_168495.1| TetR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MRLTAEDKDKITRRILESAAKAFRADGYDAVNLDRIMAGAGLTRGAFYAHFKSKDDLFCAVLRFQHPLLR
MLKARPGGNGPALADEMRAVLAGYLEPMHLETVFKGCSLAALTGDATRAGPEARAAYQAGWQDILIEMAR
GQSVPPSAFAPVLTLASGAVRSARAMCDAEARAELLREVAQAVDQLLDRALSAS
>gi|56698124|ref|YP_168496.1| hypothetical protein SPO3300 [Ruegeria pomeroyi DSS-3]
MTELHVTPIYAALLAILMAVLSTWTGVQRGRSNVALGDGDDAALALAIRRFGNLSEYAAMTALILLLMEM
QGIADTWLHLYGGLLVAFRLLHPLVLYAQPEAPLWRKAGRFVSAAGTAALLLAGGVAILI
>gi|56698125|ref|YP_168497.1| LysR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MDWDDLKTVLAVVRGGTLAAAAAELDINYTTVSRRILRAEAALGEVLFERLADGYRATDAGRMVAEHAAG
MEARQDDLLRRLQSRDQSLSGELVITAPQLLVGPHVAPVMARFAAAHPQVQIHLRATNDLLDLTRREADL
AIRISRSPGDTLTGLRLCAQHAASFATPELAERLAEDPEAAVDWIAYEQNPRVPPTILERYPNTRLRMVF
DDMAAMVGAAQAGLGAVRMPMFLGRASPGLVQVPLLAPQPYADIWVVAHRDVWRAAKPRAFREVLVPWFK
TNRPLFVA
>gi|56698126|ref|YP_168498.1| hypothetical protein SPO3302 [Ruegeria pomeroyi DSS-3]
MHATHALPRVFDTHSRDYSWVIATRKEIDMIYAVFKARVTDPAALATYREQAGAALARHGGKVEAATPAA
SALDGTPDIPDVAAVLSFPDAAAARAWIDDPTLADLHALRRSAGKTEILLLG
>gi|56698127|ref|YP_168499.1| GDSL-like lipase/acylhydrolase, putative [Ruegeria pomeroyi DSS-3]
MLRTLLFLVTFTGVLAACQDSVSRNQDARILAIGDSLLSWNSALGSSIPDVIEKELGQPVVDRSFGGAWM
LTRDEGDEGRGLNVPYQYEPGNWDWVVVNGGGNDLLFGCGCGRCGTVMNRLISEDGESGQIPDLIRRIRG
EGARVIYPGYLRSPNLLTPIEHCKNDGDELEARIARFAETDAGVFYISMQDIVPPGGLTYFAPDLIHPSR
KTSRKVGERLASAIRQLDARP
>gi|56698128|ref|YP_168500.1| allantoate amidohydrolase [Ruegeria pomeroyi DSS-3]
MTVNAERFLEDLNTLRSFGAAGVGKGVVRPAYSEADIAARRWLAGRMEEAGLQVRFDPVGNLFGLAAGPS
LLMGSHSDSQPEGGWLDGALGVIAALEIARSSDRPVSVVSFQDEEGRFGVTTGSAIWSGHLPLTEADGLS
DHAGVSFATARAAMADLAGDFVDPAQFTGFVEMHIEQGPTLDIEGEQIGVVSDIVGIRDMKVTFEGQQNH
AGTTPMHLRRDAFQALGEFNARLNDRFRNVVTPRTVWTIGHVNLHPNASSIVPGRARFSMQWRDGDTARL
ARMEEIIRATALEVAEARGMKLSFGPLLGLEPVEMDRALRAALEQGAEAVAPGRWRSMPSGALHDATNVS
RLMPVAMLFVPSIGGISHDFAEDTREQELLAGLRVLDHAVRVLV
>gi|56698129|ref|YP_168501.1| phosphoglycerate mutase family protein [Ruegeria pomeroyi DSS-3]
MSHITLIRHGQANTHARDEASYDRLSDLGHQQARWLGSHLADTRAHHPRVYCGTLTRHLETAASMGLADV
VQDPRLNEIEYFTLAELFETQHGVVVPEDREGFVEHLPMTFTAWAEGRIQDAPESFEQFETRVQTALAEI
AQGAGPAIVVTSGGLISMVMRQAMGLDIPAMARVALAIMNTSMHRLYPIGTHLSPVLFNAVPHLEAPERQ
FAQTHL
>gi|56698130|ref|YP_168502.1| glutathione S-transferase, putative [Ruegeria pomeroyi DSS-3]
MQLYCAPGTISVAVAIALHEAGIEHEKVQLDFRAAEQTKPAYQQINPKGRVPALALPGGILTETGALLEF
IADSAPDKGLVPADPLLRARMREVMYYLATTMHVNHAHKLRGARWADRADSWADMTAKVPETMATSAAYV
ERNGLRGPFVLGEVLSIADCYLYVVTGWLEGDGVDLEPFPKIRAFRAAMEARESVRAVKAAGLL
>gi|56698131|ref|YP_168503.1| saccharopine dehydrogenase, putative [Ruegeria pomeroyi DSS-3]
MTHLWVRAEQRPNEERVGLTPEGAAALIAAGLRVTVEESSVRAIPLDGYRDAGCQIAPENSWPDAPGDAI
IFGLKELPEDGTPLPHRHIMFGHAFKGQHSGRRLLERFKAGGGTLYDLEYLVDENGRRVAAFGYWAGYAG
AAVTLKAWAAQQQGGICGPVGVYPGKDTLNAALAAELDATGAPRPRAIVIGALGRVGTGAADLCTAMGVE
VTKWDMAETASGGPFPEILAHDIFLNCIFARPGTPVFVPREALSAPRALTAIGDVACDPDSDYNPVPVYD
RATSWDAPVLRVAEAPVLDVMAIDNLPSMLPVESSEDYAAQLLPSLLTLTDLDAGVWGRARATFLGHVEG
>gi|56698132|ref|YP_168504.1| hypothetical protein SPO3308 [Ruegeria pomeroyi DSS-3]
MMEIYLGFLAGTLGTICWIPQAWKAWSSRDTAGLSLPSNLLFLLTVTLWLIYGLLVGDLPLIIANACAAV
IVLSIITAKLKFG
>gi|56698133|ref|YP_168505.1| saccharopine dehydrogenase, putative [Ruegeria pomeroyi DSS-3]
MTIHWCGTGLSAIPGLRRLIEAGHALTVWNRTVEKARAELGDLTDDIRAFDIDALGAVLAKGDVVVSMLP
GDWHVPLAELAIAKGTHFVSSSYIAPEMRALDERAREAGVSLVNEIGLDPGIDHLMAHELVADYRASDAF
DAQNHLSFISYCGGIPKHPNPFRYKFSWSPLGVLKALRSPSRSIRDYAPLDVARPWDAISSYTAPLPTPE
SFEVYPNRDSLPFMGQYHFKEHWPVKEFVRGTLRLNGWADAWGDVFREIETLSGPEGDARLKEMSDQFWA
ENAYDQGEPDRVVLCVGLKAEKDGREVWHKSYVMDAWGDARGTAMARLVSIPVSLAVEAVLNREIPAGVH
AASSDPKLLARWMAEVATLAQHLQIVDHTA
>gi|56698134|ref|YP_168506.1| hypothetical protein SPO3310 [Ruegeria pomeroyi DSS-3]
MLEISARKVAQVAMMARELDRAEGELRAFIDRMGEDEQAELVAIMWIGRGSFETEELAEAIETAKAEATT
PCADYLLGSPHLSDHLENGLDALGISAEDVENDLM
>gi|56698135|ref|YP_168507.1| ADA regulatory protein, putative [Ruegeria pomeroyi DSS-3]
MTDLFLPDDDTLYAALLARDPAWDGRAYVGVSSTGIFCRLTCPARKPKRENCHFLPTVAACLAAGYRACL
RCRPLRPEGDGDPVVTRLLAALEADPARRWTEGGLTAMGLDPSTVRRSFKRQFGQTFLDMARQARLQAGL
TTLAQGGRVIDAQIEAGYDSPAAFRAAFARHLGLPPGSFRANARLRADWFDTVLGPMIAVSDRTHLHLLE
FADRKALPTELKRLHASCKGDMGFGRLPPIDEAEAQLTAFLAGRRARFDLDLALHGTPFTCRVWQALQEL
PAGSTVSYSELARRLGRPEAVRAVARANGANQIAIVIPCHRVLGADGALTGYGGGLWRKQRLIELERAYA
QTERTPA
>gi|56698136|ref|YP_168508.1| hypothetical protein SPO3312 [Ruegeria pomeroyi DSS-3]
MNQIALAQSFAALHRPGQPLILYNAWDAGSAQAIAKAGARAIATGSWSLAAAQGYADGQQMPLEFALQIL
ARMASRVELPVSFDFEAGFASRPGDLATNTERVIATGAVGVNFEDRVIGEQGLLPLSEQVARLTTLRRAG
EATGVPLFINARSDVFFQGSAPEDHPALMGEALTRARAYAEAGADGLFLPGLVTPDLIGEVCAATALPVN
IMQTGKAPGHAQLAALGVARISHGPAPWIMAMAELTRAAEAALKF
>gi|56698137|ref|YP_168509.1| DNA-binding protein, putative [Ruegeria pomeroyi DSS-3]
MQPDETTLKLREVRAAAGLSLAKVAELTGVSKAMLGQIERGESSPTIATLWKIAKGFQMPLSALLGPAAL
RDPHDARLFRTVTFPGSIEVKIVFPFDPLLGAETFHVALKPDQSHQSAAHAAGVTEEVFVLQGTLEVLRE
GDWVPVASGQGLRFAADLPHGYRAGPTGAAFLNMHHYPREATAPAPIPG
>gi|56698138|ref|YP_168510.1| dihydroxy-acid dehydratase [Ruegeria pomeroyi DSS-3]
MPMYRSRTSTHGRNMAGARGLWRATGMTDGDFGKPIIAIVNSFTQFVPGHVHLKDLGQMVAREVEAAGGV
AKEFNTIAVDDGIAMGHDGMLYSLPSREVIADSVEYMVNAHCADAMVCISNCDKITPGMLMAAMRLNIPA
IFVSGGPMEAGKIDIADLEMTKIDLVDAMVAAANDKFTDEQVQHIEENACPTCGSCSGMFTANSMNCLAE
ALGLALPGNGSTLATHSDRKALFLEAGRRIVEITKRHYEGEEKGLLPREIATFEAFENAMSLDIAMGGST
NTVLHLLAIAHEGEVDFTMTDMDRLSRKVPCLCKVAPNTANVHMEDVHRAGGIFSILGELSRAGLLHDDC
GTVHSASMGEAIAKWDIKVANNPEAESLFKAAPGGVRTTQAFSQSNRYKDLDTDREGGVIRSKEHAFSQD
GGLAVLFGNIAEDGCIVKTAGVDASILQFTGTAHVCESQDDAVNNILTGKVKEGDVVVIRYEGPRGGPGM
QEMLYPTSYLKSKGLGKACALLTDGRFSGGTSGLSIGHVSPEAAEGGTIGLVEDGDRIEIDIPNRRIHLA
VSDEVLAARRAAQEAKGWHPAKPRKRKVSTALKAYAKLTTSAAKGAVRQV
>gi|56698139|ref|YP_168511.1| LysR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MRPSLRQLEYIVAVDRLGRFGLAASALNVSQPSLSAQIAEVEAELGLRLFHRSRTGVIPTVQGAELIRRA
RRILREMEDLRAAASGGVPFGGRLRLGVLPSIGPYLLPGVVSALHRNHPELRILVREESTQWLEQGLKAG
RFDLIISTPEDHPGTVQTRLFSERLWIAVARDDVLAQGSGPVRADDLRGRMFLTLDRGHRLSRIVYALAS
ECGGVVSEEYEGTSLDGIRLMAASGAGVAILPEVYVRRQGEAGHETVLRPLVAAQASRDIALLQLGGGEE
MAGTDLIAGALRQGAEALGIAADSAGEET
>gi|56698140|ref|YP_168512.1| membrane protein [Ruegeria pomeroyi DSS-3]
MPLILDSLTVNLMTPTILFFALGLIAAFARSDLSIPEGAAKLMSIYLLMAIGFKGGASLAEHGIHADLFA
AIGAGVALSFALPFAAYLLLRAMTRLDPMNAAAVAGHYGSISIVTFVTATSLLELGGYSYEGYMIAVAAA
MEVPAILSALWLAHRGGARTEGSDHLWRDLLANGSIVLLLGAFVIGAATGGDGMKTIAPFIVTPFTGVLC
LFLLDMGLSAGRSLLRNRALLTPGLFAFGLLMPILSSLLALGLGQMIPLSPGGLFLLMVLAASASYIAVP
AAMRIALPRAESGVYLTLSLGVTFPFNVTLGLPLYLWLAGVN
>gi|56698141|ref|YP_168513.1| transcriptional regulator, putative [Ruegeria pomeroyi DSS-3]
MPRAARLSAERWVEIGLETLAQEGYVALKADQLSRAQGVTRGSFYYHFENVADFHAAVIARWKHVATNQV
IAGLLDQADPRKALESLFRTAFGHPESLEWPMRFWAENEALARAAIDEIDTRRIGFLEQLLGAIGHAPPI
ARRKAQLIYDCYLGSSLRRRLNPAELDGLVAELLQLAGTPATGDW
>gi|56698142|ref|YP_168514.1| hypothetical protein SPO3318 [Ruegeria pomeroyi DSS-3]
MGFPGTWMTESESVVYRVVPKCACSTIGQIMYYSDHGEFFEGDIHDAQGGMHKWALEASQGPITRNVKAH
KSYSFTCVRNPYTRILSSFFDKICGIQRNGKRYRGNLVPTLIYKYGIEVGGEDGKQEFDQIASFRRFLLF
ARDTIRWRRPMDPDIHWSAMSGHISTFICNGGRYDKIFWTESFNDGMQEVLDNIETPHKVRLDKIPRFNE
SEGHGPKRLHPVEDYFDDLSKHLVYEIYKRDFDLFKYDFENPGNKMPIDEIDLDEVHAKLGE
>gi|56698143|ref|YP_168515.1| EpsK domain-containing protein [Ruegeria pomeroyi DSS-3]
MAKIAYILLCHKDPDAIIMQAERLTAAGDYMSIHFDARARKADFARIRKALADNPNVTFARRRIKCGWGE
WSLVQATLNAIEAAVDEFPRATHFYMLSGDCMAIKTAEYAHSFLDAQDKDYIESFDYFESDWIKTGWKEE
RLIYRHWFNERTQKRRFYAMFQAQKRLGLTREIPSDIQVMIGSQWWCLRRRTIEWILDFTRKRRDVMQFF
ATTWIPDETFFQTLVRHLIPEDEIDPRTLTFLMFSDYGMPVSFYNDHYDLLLSQDFLFARKISPEAKELK
ARLGRLYAAHGVQFQISNEGRNLYKFLTGRGRIGRRFSMRFWETESTLGRERELMILVCKKWHVAKRLLD
QIRQVTNVPSIEYLFNEEGTPLPDLGGIQATLEKRTRHRRALMRMLFEYFDTDRLVICLDPTNLELMHDF
FSDRSVTRMLEIECQFTDEYLIGHSYRVGLAGERTPKATLERLLPTIRNEMTYEADRIRDAGFARYGRIH
QTSTPEENADKVAEFLSIPWDQALRITQTDHLFAD
>gi|56698144|ref|YP_168516.1| hypothetical protein SPO3320 [Ruegeria pomeroyi DSS-3]
MRYVKWVIIGLFWLCVAAFLHYTLPQRDIVRIVNTYEERQELNDWTRIFWSRPDDQSATIINRDVQFIQG
VTPEGRPKVYRNEDTSWSWPPYFKFDTANLYTEANDAISTKDTPEWVAITHYGWRNEFLSIFPNAVAIKP
VAGPDVRLIPWFNIIVLTLLAALVWAIWVRWRRFRQRRIDPVIEDVEDSLYAAGEAIEERRGRLRRWLDS
WKSK
>gi|56698145|ref|YP_168517.1| hypothetical protein SPO3321 [Ruegeria pomeroyi DSS-3]
MFGLLRLVVVLLVLQTVTYIGLSLYSRAVRRGKLARWWEEKGKTGDKEAFVARGLKAYDKSFRRKLILGV
YFVPWVLIAVLIYIVNFK
>gi|56698146|ref|YP_168518.1| hypothetical protein SPO3322 [Ruegeria pomeroyi DSS-3]
MIRLIQSGLMFGNLVHISSPALVERYNRALQHLAGKTTALTDFHIDISGFSPEIGDELGDPLYLNPNGVN
RQFILLTPEQKRAPLLNVKFSTSRPILRDFIEANEAQLFALTATDAVAGELVNSVFRLRSPADLFTLRKI
EIEADTVGGTLKNADKLAAMIERFKTENDAWFDDVLIAEMIGISKQTGDISRNPVHLSHKAHEQRNFWTA
HFGGLYLFPDMQHPAMICAGEKPRDEMPVKYVFDLSERNRIAKFLDYNKLAEPIVRARGMDAAAVLRQKM
DFIVIDTAAGAGLNPAGLDRGDMRRLARMHADRLPDEYHGLAELARWAENGGDWPRISADHPAYFYGLRA
ADTPERDLVNMLLAELAPLDARQLFICHKELFYRHYASWSEAKKSFVADFLAREYQVDKAGARAALFGHE
PEMESEDSPPGLDERLIERVGPWGAIRRR
>gi|56698147|ref|YP_168519.1| hypothetical protein SPO3323 [Ruegeria pomeroyi DSS-3]
MSLTSDQMELREEAIRAHYPAATTLLDGFDHAPRVAQARTPARAEERSPGIPTARRFRSTTPGLVTRRTT
RPDGVHLRERIEAADDGDTLVSPLQATVAQAIRRALAIALAMGEGYGDRTPLGDLKRANLAGDLPVARKG
EFTELLTAEGLVVTHVFGNALAYLLSPHLGATSVEVGEVEEFLTDNAQVALHGALWDLDQKLAQFAGDDA
QLIATTAGFAEQLMAKAAARAQGAGHLAPFTGAAWHVEADDLTLRGFTPSAKARSTKLTMTFKKPNEVVG
NHIAKYQAMKLAKMLMAYDFERRLNPFAELGGFIFTFMGDGKPGTGKTTLIQMMAGLIDEYCRNAGYPFR
YQNFGIDNIDSYQGKSGQNAKAFVQNVLDPGVIGFGTIDDIDQIAGKRGDRQSSAGQQEVTAVFMEAFAG
ANTVVRGNCTFGMFSNYPENVDDALRQRAGARFLVDGPQTRDDYIDILALLLGKRHDIPLGAHDLYAAQE
IKRAVAASFAAHGRPQEAGLAQVWERVGAQVGPLDTIAKLGTYLKGIQEADERFTGRAIKNITDAVKVRA
MDFELPDEWMETPDLFLFRDYDTKLAMIEELRQPITVDMVVQEINRYADSEFRYADKSDEVAIDGMVRDL
TRQEEAKRRYLEEKG
>gi|56698148|ref|YP_168520.1| hypothetical protein SPO3324 [Ruegeria pomeroyi DSS-3]
MSANPTQDHVGLTDTFASRRYFRKFEGITTHLLRVAANMEAEGVISRDEVRIVSRYISGLLFTFRALSMK
YLLVGRDTGRFFGSLNMDKRDSGFPVAAELMTMANDAQQAASHLANMPSEAALKDEMVQTILGSREIPTK
LQFALSQRLYYEELARGQLFWVRNDPECHWIATEGARRRFLLHWAVYDSQINLPVIYLMRLEDTGKQALP
KDSRRWPEVQAHLMAQSLAGLKLLTIAKGFDEDFDDLHPKHLRRIHVGPMYSSAFTEQSGPLRAVLEDAQ
APAGQDWALAWTSEELESEEVREERAGWFGTVEREVFALDPFGGQGAETGATRTSRSIILPQRPFQVLAE
RNPAGFADVRKFVVSDSGQVLRY
>gi|56698149|ref|YP_168521.1| hypothetical protein SPO3325 [Ruegeria pomeroyi DSS-3]
MSDTAFEAMILETQRKVRESQAQIEGVTSRIEAARAKIGTAEADIDIENATLEDVHAHTEVMNANIAELI
MGLDDVTSAFSKDFDEMRSKTGWESFVGIFSSGKSESMRQERMRTANIDDKLQDLIAKSDVIVKLLQGQL
TVLEEQREKVETNLTGTLDDREFTVQELETVRAEILAMDPQIIALENKISVEQDAAARTKLETELADLNK
TYNAKVRDEQVKLAKSQTLERYIEKGKTWVDSLQNQAATQMVLINKLQTDTQQRVVLYDALTKSLKTAQQ
QDVAHRINEIGVQTDQEAQTAMAAIGTATNQKMADMLEAHEDHMVFARDVLEKKAKADERFARRFAAIVE
KHDKNLYGG
>gi|56698150|ref|YP_168522.1| hypothetical protein SPO3326 [Ruegeria pomeroyi DSS-3]
MSSFYAPVTPQGAGESERPAPEKVLSGDPVFTTWNLEEREGLYCGIWRSTPGKWRVSYDEWEYCRILSGH
SVLTDAEGTEITLRAGDSFILRPGFSGTWEVIETTTKDYVIRL
>gi|56698151|ref|YP_168523.1| creatinase [Ruegeria pomeroyi DSS-3]
MTADLSRPEFYRYHNGTEARLPFEAAEYEARLAGLRARMEALGAEAAVFTSMHNIAYYSGFLYCAFGRPY
ALVVTPRESVTISAGIDAGQPWRRCHGDNITYTDWQRDNYWRAIRSVTGEGRVIGYESDHLCLLQKGKLD
AFLAPSKTVDLFDTTMRQRMMKSAAEIALIRQGAQVADVGGYAIREAVKAGVREIDVAMAGRDAMELEIA
KRFPDAEYRDTWVWFQSGINTDGAHNPVTGRVLERGDILSLNTFPMISGYYTALERTMFVQEVDAASLKI
WEANVAAHEYGMSLLKPGASCAEVTHKINDFFAERDLLQYRTFGYGHSFGVLSHYYGREAGLELREDIDT
VLEPGMVISMEPMLTIANDQPGAGGYREHDILVITEDGNENITGYPYGPEFNVVG
>gi|56698152|ref|YP_168524.1| succinate-semialdehyde dehydrogenase [Ruegeria pomeroyi DSS-3]
MGGPTNSRRRHAMLDAATDLKSLLKTPDLLATKAYIGGQWVDGDNGTFAVTNPARGDVIAEVADLSRAQV
AGAIAQAEAAQKEWAKYTGKERAVILRRWYDLMMEHAQDLGRILTAEQGKPLAEAVGEVAYGASFIEFFA
EEAKRIYGETIPGHQRDKRITVLKQPIGVAASITPWNFPNAMITRKAGPALAAGCAFVARPAAETPLSAL
VLAVLAEKAGIPAGVFNVVPSSRSSEIGKEFCENPGVRKLTFTGSTEVGRILLKQAADQVMKCSMELGGN
APFIVFDDADLDAAVEGAMLCKFRNNGQTCVCANRIYVQAGVYDAFAEKLAAAVAKLNVGDGLSDGVTTG
PLINAEAVEKVLEHLGDVTAKGGAVLTGGKPHALGGTFFEPTVVTGVTQEMKVAKEETFGPLAPLFKFDD
VDEVIAMANDTIFGLAAYFYAKDLSRVYKVAEALEYGIVGVNTGIISTEVAPFGGIKQSGLGREGSHHGI
EDYLEMKYICMSV
>gi|56698153|ref|YP_168525.1| globin domain-containing protein [Ruegeria pomeroyi DSS-3]
MKDEQIRLVQSSFARVFARKAELAERFYVHLFERLPDAKSLFRGDFFAQKEMFATMLASTVRGMNDVQAF
HTMGQALARSHARFNLRRDDLDKAAEALSAAFRDVFGDTLNAQEQEAWDVAMRRLTRMLATPE
>gi|56698154|ref|YP_168526.1| ribonuclease R [Ruegeria pomeroyi DSS-3]
MTRIPTKQEILDWISAHPTLTSKRDIAKAFGIKGSDRIDLKRILKELEAEGHLEKRKRSYADPDRLPPVS
VLQVKEPDENGDLFARPLEWHGEGVEPIVLVLPRASDPALGAGDRILARLTVVHEEDHNYEARLIRRIGT
NPHKILGIFRKSAEGGRILPIDKAGQNEWLVAEGAVHGAKDGELVEAEQAGPKGRLGLPRARIIERLGDP
SAPKAVSLIAIHQHGIPDDFPDKVIEEADSAKPQGLSGRQDLRDMALVTIDPSDARDHDDACFAHADDDP
KNPGGHVIWVAIADVAAYVRAGSALDREARKRGNSTYFPDRVVPMLPDRLSGDLCSLHEGVPRACIAVRM
QIDAQGNKIGHRFVRGMMRSVASLNYQEVQDAIDGSPNDKTGPLLDEVLTPLYAAYKALDAERDRRQPLD
LDLPERRIVLNDKGHVESVAFRDRLDAHKLIEEFMILANVAAAETLIAKRVPLLFRVHEEPAPEKLEALR
ETAQASGLTLAKGQVLQTRHLNALLHQAAGTDEAELINISTLRSMAQAYYNPENFGHFGLALKNYAHFTS
PIRRYSDLIVHRGLIKAHGWGDDGLTADEIEQLDRIATHISDTERRSMMAERDTTDRYLAAYLSERVGNE
FSGRISGIARFGAFVKLDETGADGLVPVRSLGREFFHFDREAGTLMGSETGLLIAIGQRVTVRLAQASPV
TGGLEFEMLSIEDKDMPRGGTPSKGKRVVRRKAAKAKHKTDKLKRKMEGRRK
>gi|56698155|ref|YP_168527.1| hypothetical protein SPO3331 [Ruegeria pomeroyi DSS-3]
MRRTLVIMVKEPRPGRVKTRLGRDIGMVGAAWWFRHQTRALIRRLRDPRWRIVLAVSPDVEGLASRVWPA
DLARSPQARGDLGQRMARQLRGAPKGPVCLIGADIPGVTRAHIARAFAALGRAEFVFGPAPDGGYWLVGA
ARRGALPPGLFGHVRWSSEHALEDTLAGLAGRRVALVDGLRDVDRLADLRDASPPGRASSLLR
>gi|56698156|ref|YP_168528.1| succinyl-diaminopimelate desuccinylase [Ruegeria pomeroyi DSS-3]
MTLDAARLTADLIRCASVTPADDGALDVLERVLSQAGFSCTRVDRGGICNLFARWGDKGHARSFGFNGHT
DVVPVGDAAAWTVAPFGAEEKDGFLYGRGATDMKSGVAAFVAAAVDLVTTTPPEGAVIVTITGDEEGDAL
DGTKALLDYMAASGERMSVCLVGEPTCPDRMGEMIKIGRRGSMTAWFTVTGVQGHSAYPHRAKNPLPAMA
RLMDRLASHGLDQGTDHFDPSTLAVVTIDTGNTATNVIPAQCRGAVNIRFNDLHSGASLTGWMQGEADRV
AEEFGVAVEMKVKISGESFLTPPGELSDLVAAAVEAETGVTPVLSTSGGTSDARFVKDHCPVVEFGLVGR
TMHQVDERVEIAQIHQLKAIYGRILRDFFA
>gi|56698157|ref|YP_168529.1| hypothetical protein SPO3333 [Ruegeria pomeroyi DSS-3]
MGRDMATGAELNYNQNASAMQMAQTIFGDGVTVVGASYSGWSGSSAIYSNGDALAPGATPGDTGVILSTG
RASHFTRGGGDPNRSTNTSTNTSGENNNADFNAAAGTNTYDASYLDVSFIPDSSVMTMQFVFSSEEYPEF
QSSIYQDFVGVWVNGQQAQLEVGNGDSDPGNINAVNNQNLFLDNSGDAFNTEMDGLTVTMTLTMNVIPGQ
VNTIRIGVADVSDSNYDSNLLIAANSLQTRLVAVADHSTIYPNGSVTMDILANDINQSGATLTITHLNGI
PVTAGSTITLATGQSVTLNADGTITVTGDGDVEHFNFTYTVTNGSNTDTGIVNVNAIPCFVAGTLIDTPY
GERQVERLTPGDQVFTRDNGPQEVRWVGERTVDAEGEFAPILIRAGTYGAQRDLMVSPQHRILIRDGLSE
LLFGEPEVLVAAKDLVDGRRVQIVPGGRITYVHVMFDSHQVIYSEGLASESFLPGPQTTHLFEPETLAEI
RAVFPDLDTATGQGYGPAVRRILRKYETELLLTSAKVA
>gi|56698158|ref|YP_168530.1| hypothetical protein SPO3334 [Ruegeria pomeroyi DSS-3]
MALPYGGSCVNTKPSCCSHLQRWPDMGWIAVSAPETQHFRTAGLDASAGAPALVGDHEDDLMVRGTLVFE
TRLPNAQRPRILLQFERGGAWPFHLSLQAIPGGGLILIVNQGGSVLHQVLNVADTGRIDTLRLSYAWDAP
ARAGWLALEHDEREYAHLIEVEAPCPLRIGDLRMLFRDGPHRFAAPELVYFALSSEIEPVGPMPSLHPET
PIATPDGYRPLSKIRRGDTVIVASGEAVPVLHRVSRTMPAFGSSRPLTIRRPYFGLRQDIQAAPSQRLLL
SGTEVEYLFGRESVLVPARHLTGGHSVLPARARLTATYAQLLLPTNEAMITAGALAESLFIGRLHRKPLH
LAASVLAGIERSRLPDHGRPRHHVLRAFDARILAEARVA
>gi|56698159|ref|YP_168531.1| glutamine ABC transporter, periplasmic glutamine-binding protein [Ruegeria pomeroyi DSS-3]
MGRKTGNRTLMRKFLISASLVLGLWPQFLLAQSLQVTTVTRPPFSFVEDGVETGFSMDLLAALADKLGLG
YTLERKEKFSDMLAAVMDGEADMAIANISITAARETEMDFSQPIFESGLQILVPAETNAGSSLLRALLSR
DLFLAIGAAFVILLTGGMLMWYFERRAQPYFDRKLHEAWFPSFWWALNLVVNGGFEERVPRTAFGRLFGV
LLVISSLFVVSVFTARITSVMTVEAISGSVNSVNDLYGQEVGTIDGSTAAGFLTRRDIDFAAFSDLQEMI
TAFERGALDAIVFDAPILSYYASHQGKGKAVTTGAIFLRENYGIAFPTGSARVEEVNQALLALREDGTYE
ELYRKWFGRRN
>gi|56698160|ref|YP_168532.1| hypothetical protein SPO3336 [Ruegeria pomeroyi DSS-3]
MADKQKSRQQVYTLVVQIGRKTGDGLPEGATGAALMCYASGVDEAEAVRETVAILKQADTAPLDVTGYGT
LEEREAQGHEIDAEERALMQRALEENSVIVAQMTPFFDDEAAG
>gi|56698161|ref|YP_168533.1| 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase [Ruegeria pomeroyi DSS-3]
MSNQELEAAIEAAWDARDSITPATTGATREAIEETLAALDGGGLRVAEKQADGSWHVNQWAKKAVLLGFR
IKDMEIQSGGPQGGGWWDKVDSKFAGWGESQWKAAGFRAVPNCVVRKSAYIAPGVVLMPSFVNLGAYVDS
GTMVDTWATVGSCAQIGRNVHLSGGVGIGGVLEPMQAGPTIIEDNCFIGARSEVVEGVIVREGAVLGMGV
YIGQSTKIVDRETGEVMYGEVPPYSVVVSGSMPSTGGVSLYCAVIVKRVDERTRSKTGINELLRD
>gi|56698162|ref|YP_168534.1| biotin synthase [Ruegeria pomeroyi DSS-3]
MAEAIRSDWSVDEVEALLRLPLLDLVGRANGVHRAHHAPDDIQKASLLSIKTGGCPEDCAYCPQSAHHRE
VELTREKLMNPDHVVSLARRAQRAGAERFCMGAAWRQVRDGAEFDNVLAMVRGVRALGMEACVTLGMLRP
HQAQRLAEAGLTAYNHNLDTSPEFYGQIIGTRTYQDRLDTLAYCRDAGIELCCGGIIGMGESLRDRAAML
QVLANFAPHPESVPINALIPIEGTPLAHRERVGIFDLVRMVATARIIMPLTRVRLSAGRSDFSAAEQALC
FLAGANSVFYGDVLLTAPNAGTGADAELFAALGALETA
>gi|56698163|ref|YP_168535.1| bioY family protein [Ruegeria pomeroyi DSS-3]
MKQTTEAVVAGARAPALSGQILRVAAGIAILTLSARVQVPFWPVPMTLQVAAVMALAALYGMRLGTATLA
GYLAVGALGLPVFAGTPEKGLGLAYMLGGTGGYLVGFLVASALVGFAADRLHRLALWPAMLLGLAVIYAL
GLAWLAQFVPADKLLAYGMTPFVAGDLVKVTLAALLVTKLPQGWAERLRGGARHG
>gi|56698164|ref|YP_168536.1| GntR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MTATIADTIYARLSQQIITGALSAGEKLRQDHIARAFDTSHVPVREALLRLEAHGLAQSEPRRGMRVTAL
DPAEIREVIEMRVALEPLALQHAVQNATPGDLQAIDVARLACDGAEDMPTWEARNRAFHRAILTPCAMPR
LLSAIDDLHIASSRHLHAHWRQRWRQRTDTDHAAILMAMKRRDAETACDVLRRHLRRAL
>gi|56698165|ref|YP_168537.1| threonine dehydratase [Ruegeria pomeroyi DSS-3]
MDWKADIAAAADRIAGHVQVTPVMETRGFGLSDPLSLKLEQMQHTGSFKARGAFNTLLSSDVPAAGVVAA
SGGNHGAAVAYAARALGHRAKIFVPEMAGPAKIALIRDTGADLEVVPGEYANALALAQAHEAATGAMQIH
AYDAPATVAGQGTCFAEWDAQGLEADTVVIAVGGGGLVAGALAWWQGARKVVAVEPETSCALNAALTNGG
PVDVEVSGIAANALGARRIGEICFGLAQGGARSVLVPDAAIAAAQRALWAERRVLVEPAGATALAALMCG
AYRPEPDERVAVLVCGGNIAPDPFAG
>gi|56698166|ref|YP_168538.1| decarboxylase family protein [Ruegeria pomeroyi DSS-3]
MGQRRKQGSPQMRDDRQSPFRDAHTDRSTASHVPDTPQTRSPAYKLAFADEDFLCRDELRPVRLQLELLK
PEMMMAERGITSTVVMFGGARIPEPAQKHTARTQTLADLSEYYDEAREFARLITEKSKETGCKEMVIVTG
GGPGVMEAGNRGAKDAGGCSIGLNIVLPHEQAPNLFVTPELSFNFHYFAIRKMHFLMRARAITIFPGGFG
TLDELFESLTLIQTGRMERVPFLLFGREFWERVINWRALADAGTISAEDLDLFRFVDTAQEAVEIIDNWE
PAPPRDAIPGR
>gi|56698168|ref|YP_168539.1| hypothetical protein SPO3343 [Ruegeria pomeroyi DSS-3]
MNFRPDQQSVSKSATKPWRTEMAQADIGGTMIEAGVLDLLQRERAKALSAREWKFRLMGYGYAIKDVQGA
QVVTRLPQGVELGVLPAEFA
>gi|56698167|ref|YP_168540.1| cystathionine gamma-lyase [Ruegeria pomeroyi DSS-3]
MGNDGHETPRMGAFLHLRGAGLDKGEPVALPLVQSSMYHLPGTPDGSNSYGRADNPTWVALEHALEHLEG
ASCRVFPSGMGAISAALFATLQAGQRLLIPADGYYVTRLLADRYLRPLGVNVEERPTAGFAEGGFGGFDV
VFLETPSNPGLDLIDLAAVARAVRAAGGITICDNTTMTPLGQRPLDLGIDIVVASDTKAMGGHSDLLLGH
VASRDAGLVQAIEDWRRISGAIPGPHEAWLLHRGLETLEVRFDRMCRNAEALAPRLARHRAVSALRFPGL
PGDPAHNLARAQMQRFGFLLSLDLGSEEKAEQFINGCPLLRPATSFGGVHSSAERRARWGDAVTPGFVRL
SIGCEPLEELWQALREALDAL
>gi|56698169|ref|YP_168541.1| hypothetical protein SPO3345 [Ruegeria pomeroyi DSS-3]
MMRYSRANRSKRCAMSRRLLSIAALLAGNAIGLLLAALLLDGFSIAPLSLIVVVIVFSLIQALAEPLIRR
LSQRNLPALQGGIALVVIFVGLLVTELVTSGLVVGGISNLLAATLLVWLGALAAGILLPRYVFKSLRAPK
A
>gi|56698170|ref|YP_168542.1| radical SAM protein [Ruegeria pomeroyi DSS-3]
MSVKAPITQDVVTIPRKLPEGRINLVGLTRDRMREVLIDHGTPEKQAKMRVGQIWQWIYQWGVRDFEAMT
NLAKAYRAQLAEHFTIEIPEVITRLVSEDGTRKYLVRIAGGHEVEVVYIPEEDRGTLCISSQVGCTLTCS
FCHTGTQKLVRNLTAAEIVGQVMMARDDLGEWPVPGAPKDETRLLSNIVLMGMGEPLYNFDNVRDAMKIA
MDPEGIQLSRRRITLSTSGVVPEIARTAEEIGCLLAISFHATTDEVRDVLVPINKRWNIEELLSALAAYP
KVSNSERITFEYVMLDGVNDSDADAHRLLDHIRRYKIPAKINLIPFNEWPGAPYKRSSNNRIRAFANIIY
QAGYAAPIRKTRGDDIMAACGQLKSATERARKSKKQIEAETGL
>gi|56698171|ref|YP_168543.1| hypothetical protein SPO3347 [Ruegeria pomeroyi DSS-3]
MRVLRYAVALALAPVLTAADPALECSDAASQVETGACVSEMSARVEGALAIALEIARGSAAELDEVTGRK
MALPALDSAQSAWTAYRAAHCEAVGAGFGGGSGTGIAITSCQIELGRARIDELMAMAQ
>gi|56698172|ref|YP_168544.1| hypothetical protein SPO3348 [Ruegeria pomeroyi DSS-3]
MGSKLVRAIAGLCLAATAATTSVSAQQSESTNRVASKTDWSVFVEDNPTECWSVSAPKETVNTRGGSVVS
VRRSDILLMVFFRPKAGVKGQVTFTGGYPFAPGSTVNLNVGGTEFELITEGEWAWPATAADDAKIVAVLK
RGTDAVLTARSARGTQTKDTFSLLGFTAAVEDAEKRCGG
>gi|56698173|ref|YP_168545.1| L-asparaginase [Ruegeria pomeroyi DSS-3]
MTRPVPMAELWRGALLESVHMGHAVVCDSSGQVVRSWGDPGLVMYPRSSSKMIQALPLLSSGAAAKYGLG
TEQMALACASHNGAAIHTHRVNDWLEQLGLDDHDLRCGPQDPDDRPEHERLIRAFESPCQVHNNCSGKHA
GFLTLGRHLEAGAEYHEIDHPVQQAALAAFEEVTGEASAGYGIDGCSAPNFATSLTGLARAMAWFASARD
RSDRQSQAAAQLTEAMMKHPELVAGEGRACTELMRAMNGRAAIKTGAEAVFVAILPEQRLGVALKIVDGA
TRASECAIAAILVGLGVLDPADPATRKRLDAPILNRRGIDCGRIRATAEMRF
>gi|56698174|ref|YP_168546.1| hypothetical protein SPO3350 [Ruegeria pomeroyi DSS-3]
MPMFIFAYHGGKTPETPEEGAEVMAAWQAWFGTMGDAVVNPGNPVGPSKTVSAAGVADDGGANPLSGYTV
VRATDFDAAINMAKGCPMVETGNGTVEVAEIIEM
>gi|56698175|ref|YP_168547.1| Aha1 domain-containing protein [Ruegeria pomeroyi DSS-3]
MADLRLEREFAVAPEALFAWVSDGAKLLQWWGPEGLHVPADQHDLDFTRLGPWFSVMVNGEGQRYKVSGQ
VTHVKPPQSVGFTWGWHDDDDRRGAESHVMFIVEPCAKGARLILDHRELGDDEMSLRHEEGWTSSLRKLA
AELA
>gi|56698176|ref|YP_168548.1| ArsR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MLNNAAMTQLLAAFSALSDPTRFAIVEQLMAEGELPAGDLVEGKGMSGAAVSRHLKLLRQAGLVHQRING
TQRLYSVAPEGLRAIADWTISKRIFWEGSLDRLAAAIESDKTWPT
>gi|56698177|ref|YP_168549.1| phosphoserine phosphatase [Ruegeria pomeroyi DSS-3]
MAVSTQRRCPMYVATLLTNPAIARLDPALVESLRNAWGGGDAVWLSPDEAAEFSLATLPDNRWQVWDDLQ
ALGVDLVVQPAEGRKKRMLLADMDSTMIQQECIDELADEAGVGDRVKDITARAMNGELDFEGALLERVGL
LRGLDEAVIGHVLDTRITLMPGGQALVATMRANGGYAALVSGGFTAFTAQVAAQLGFDENRANTLLAADG
KLTGDVARPILGRQAKVDALEQITARLGLSEQDVIAVGDGANDLGMLGRAGTGVALHAKPSVAAQCEVRI
NHGDLTALLFVQGYARADFVTG
>gi|56698178|ref|YP_168550.1| phosphoserine aminotransferase [Ruegeria pomeroyi DSS-3]
MAIAQTASRDDARKPLTRPANPRFSSGPCAKPPVFDVSKLADAALGRSHRAAIGKDKLKAAIEGTREILG
IPADYRIGIVPASDTGAVEMALWSLLGARKVEMLAWESFGAGWVTDVVKQLKLDAEVKTADYGQIVDLAS
VDFDNDVVFTWNGTTSGVRVPNGDWIATDRQGLTICDATSAAFAMDLPWDKLDVTTFSWQKVLGGEAAHG
MIVLSPRAVERLESYTPAWPLPKIFRMTKGGKLIEGIFKGETINTPSMLAVEDYLLALDWARSVGGLNGL
IARADANAQAIFDFCDTHDWVANLAEDAATRSNTSVCLKFTDARIQDGAGFAKAVAKRLEAEGVALDIGA
YRDAPAGLRIWCGGTVETSDVAALLPWLAWAYQAEIDAQSQAA
>gi|56698179|ref|YP_168551.1| D-3-phosphoglycerate dehydrogenase [Ruegeria pomeroyi DSS-3]
MAPKVLISDKLSDAAVQIFRDRGIDVDFQPDLGKDKDKLAEVIGQYDGLAIRSATKVTEKILENATNLKV
IGRAGIGTDNVDKDAASKKGVIVMNTPFGNMITTAEHAIAMMFAVARQIPEASASTHAGKWEKSKFMGVE
LTNKTLGVIGAGNIGGIVCDRARGLKMKVIAYDPFLGEEKANKMGVEKVELDDLLKRADFITLHVPLTDQ
TRNILGRENLAKTKKGVRIINCARGGLVDEEALAEMLQSGHVAGAAFDVFSVEPAKENPLFGLPNVVCTP
HLGAATTEAQENVALQVAEQMSNYLLTGAVENALNMPSVTAEEAKVMGPWIALAGHLGSFVGQMTDEPIK
AINILYDGTASTMNLAALNCATVAGIMKKANPEVNMVSAPVVAKERGIQISTTNQDKSGAFDGYVKVTVV
TAKRERSVAGTVFSDGKPRFIQIKGINVDAEIGAHMLYTTNEDVPGIIGTLGQTMGENGVNIANFTLGRA
AAGGEAIALLYVDEPVPAEARAKLAETGLFNQIKPLEFDVA
>gi|56698180|ref|YP_168552.1| hypothetical protein SPO3356 [Ruegeria pomeroyi DSS-3]
MNGVARAFFLVAIVAGLCGMVWGIQMSASQDHTLSPAHGHLNLLGWVSCSIFAFYYHLVPSAAANPLARL
HFGLVVVAVVLLAPGVALAIQGKTELLAKLGSVIMLGSMLLFGWIVLKVPGRVTATA
>gi|56698181|ref|YP_168553.1| LysR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MNFRTFDLNLLRVLDALLSTRSTTRAGQQLGMSQPAVSAALSRLRHALGDPLFIRQGRQLVPTDYAGGLH
APLRDLLGQTEALLAGQPDFDPGAATDSLTLSGSDFYAELLMPRLARHLSHVAPGMRVQLVDLVPDNYVQ
SVGQSAVDMAILPATPTPDWVEERRLHSSHFLAVARADHPEIASAAIAPGAVLPLDLFCSLQHALFSPEG
KLHGLGDAALARIGRARQVTMTLPVFSGVLNAVSQSDLIALIPHQLAESVAPRLGLSLYHPPIPVGPVEI
MMVWHKRASTAPAHRWLRDQIAMLMAELDTPPSIGCGVAAEPGQHTAEQAS
>gi|56698182|ref|YP_168554.1| serine/threonine protein phosphatase family protein [Ruegeria pomeroyi DSS-3]
MSTPIYAVGDIHGQAEQLETALARIEADGGPDARVVFLGDYTDRGPDSRAVLDRLIAGQAQGRDWITLKG
NHDRMFEMFLRDHPAQDDRLLVGYHWLHEQLGGVETLASYGVPVPEGARTYQVHAQARAAVPAEHRKFLA
GLSNYHQEGALLFVHAGIRPGLPLERQVENDLIWIRHEFLDDPRPHPWLVVHGHTPDKQAAHYGNRINLD
AGAGYGRPLAAAVFEGDRCWQLTGTGRQPLTPRA
>gi|56698183|ref|YP_168555.1| L-threonine 3-dehydrogenase [Ruegeria pomeroyi DSS-3]
MRSNTMKALEKSKPEEGLWMVQAPVPEIGPDDVLIKIKKTGICGTDIHIWNWDEWAAHTVPVPMITGHEF
AGEIVELGRDVTGLSIGQRVSGEGHLIGTESRQSRAGKFHLDPGTRGIGVNVQGAFAQYLRLPAFNVVPL
PEDIPDEIGAILDPLGNAVHTALSFDLLGEDVLITGAGPIGIMAAAVAKHAGARHVVITDINADRLKLAQ
HVVPRARTVDVTREDLGDVVHELGLKQGFDVGLEMSGSQAALDQMVEALVMGGKIALLGIPPGKSPVDWS
RIVFKAITIKGVYGREMFETWYKMIAMLQNGLDVSRVITHRFGVDEFREGFAAMKSGLSGKVVLDWT
>gi|56698184|ref|YP_168556.1| 2-amino-3-ketobutyrate coenzyme A ligase [Ruegeria pomeroyi DSS-3]
MSQSFLSHITDTLAQIEAEGLYKRERLITSPQGGEITVGDRQVINLCANNYLGLADHPALIAAARDALEP
KGFGMASVRFICGTQDIHRELEQRLARFLNKDDAILFAACFDANGGLFEPLLGPEDAIVSDALNHASIID
GIRLCKAKRYRYANSDMGDLEAQLKQARADGARHVMIATDGVFSMDGYLANLPEITRLAHQYDAVVMVDD
CHATGFMGPHGAGTPDHFGLDVDILTGTLGKALGGAIGGYIAGPQPVIDLLRQRARPYLFSNSLPPAIVA
AGIEAIRLVEEGADLRARLFENARYWRAGLTDLGFDLLPGEHPIIPVMLGEAKLAQDMAARLFDEGVYVS
GFFFPVVPRGQARIRTQMNAALTRDELDRALAAFATAGKALGVI
>gi|56698185|ref|YP_168557.1| RmuC domain-containing protein [Ruegeria pomeroyi DSS-3]
MIQIGDQSYSLQDPMVMAVLGGGAALLLILLMLFLSLRAANRSARTTEPMAQQLAWLGQNVQQLSMGQEQ
LRGGLAHVSDAQANAQVQVIQTVEARLSAVQQHMNDRLADNAMRAQRAMTEMQEKMSTTLHGNSKQTATS
LTQLQERLAAIDKAQDNITKLSGDVLSLQDILSNKQTRGAFGEIQLNDIVSKALPTDSYSLQHTLSNGRR
ADCLIHLPNPPGPIVIDSKFPLEAYEALRRAETPPQLAEAARQMKAAVRAHIKAISEKYIIEGETADGAL
LFLPSEAVYAELHANFADIVREGFAARVWIVSPTTCMATLNTMRAILKDARMREQAGAIRKELSLLHKDV
ERLGDRVQNLDRHFGQAAKDLSEIKISADKAGRRAQRLDNFDFEELAPDPVPNVVPLGKQER
>gi|56698186|ref|YP_168558.1| DNA mismatch repair protein [Ruegeria pomeroyi DSS-3]
MVSTDPNIIPAQPEIRQLDETAINRIAAGEVVERPASAVKELVENAIDAGATRIAIDLADGGKTLIRVSD
DGCGMTPDQLPLALARHATSKIDGSDLLNIHTFGFRGEALPSLGSVGRLTITSRARGAEAANIRVSGGRV
DPVKPAALRAGTVVELRDLFFATPARLKFMRTDRAEAQAVADTVKRLAMAEPSVSFTLRDVSGGGEGRLV
FRADAETGDLFDALRDRLAQVMGREFTDNALRIDTMREGLRLYGYAALPTYSRGAAVAQYLFVNGRPVRD
KMLTGALRAAYFDFLSRDRHPAAALFIDCDPTLVDVNVHPAKSEVRFRDPGVARGLIVSALRHALAEAGH
RASTTVAGATLGAMRPEQTGARIYQMDRPSPAARMASHQAQAPGFAELSSSYSGRMVEPEPGEDARRAEE
PPAETPPESLPLGAARGQVHENYIIAQTADGMVIVDQHAAHERLVYEKLKRQMAETGVAAQALLIPEIVE
LSTADCARLLDLSDDLARLGLTIEPFGGGAVAVRETPAILGPVDAGAMLRDILDELADQGESATLQARIE
AILSRVACHGSIRSGRRMRGEEMNALLREMEATPHSGQCNHGRPTYVELKLSDIERLFGRS
>gi|56698187|ref|YP_168559.1| zinc/manganese/iron ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MNGSEFVPLSLTPLLIGVLAAVACALPGNFLVLRRQALIGDAISHVVLPGIVVAFLLTGAIAAWPMMLGA
AGAAVVAVVLIEAIRRLGRIEPGAAMGVVFTTMFAAGVLLLEQTDTSTVHLDVEHALYGNLESLIWLDAT
GWASLLDPVALAGLPVELSRILVTLVGVVGFIWLFWRPLKLSTFDEGFARTLGIRTNLLGLALVIVAAVA
AVAAFDAVGSIIVIAMFICPPAAARMMTNTLEGQVGWSVVFAILSAVLGYVLAGYGPLWLGARDAVSAAG
MIATMSGLILALTARFGPCRSRTGAPVQA
>gi|56698188|ref|YP_168560.1| zinc/manganese/iron ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MLRDALLLQLGYNATLVAVGATLLGISAGVTGTFLFLRKRALVSDAISHATLPGICLAFLLMVALGGDGR
SLPGLLVGSAMSAWVGLLCLNWLTRNTRLAEDAAIGAVLSVFFGLGIVLLTVIQTLGAGRQAGLEGFLLG
STAGMLWSDALVIALGGAGTLALILLIRRPMTLVAFDPEYAAARGVPVNRVDLAMMGLVMAVTVVGLKIV
GLILIVALLIIPPVTARFWTERSDRVVLLSGLTGGLAGYLGAAISASAPNLPTGPIIVLVAFAFFALSLL
VAPGRGVLAALLRHGRFQRRVHLRQGLLALAQGQPIYEPLTLRLLRRAELVRADGVATDKGRARAAKALR
DEKRWQIVRADLTQEAAAALYDGLRDIETVLTRDQIAEIDSRIGGPQEVPA
>gi|56698189|ref|YP_168561.1| zinc/manganese/iron ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MIELAADKGIRLADETIASSPLAVRGLTVSYGQKPAVFSVDMTVQPGAMTAIIGPNGAGKSTLLKAALGI
VKPLSGQVTVFGRPLEEQRARIAYVPQRASVDWDFPTRVIDVVLMGLYRELGLLGRLRARHKAQALDCLA
RVGMRDFADRQIGQLSGGQQQRVFLARALAQDADLYLLDEPFAGVDAATEKAIISVLKSLKQAGRTVVVV
HHDLATVSDYFDHVFLINTRRVAEGPVAEAFTADNLQAAYGGRLATAQVDQLARVLG
>gi|56698190|ref|YP_168562.1| zinc/manganese/iron ABC transporter, periplasmic zinc/manganese/iron-binding protein [Ruegeria pomeroyi DSS-3]
MIRRGFLAALALTCSLPLAAWAEAPLRVVATTGMIADAARQVGGDLVEVTGLMGPGVDPHAYRQTRSDIV
AMTRADLVLWHGLYLEAQMESFFQDLGRKRQVVAVAEGIEPSRLRAHDDYADKFDPHVWMTPELWREVVA
EVERALTETRPEAAETFAANAARHIADLDRLSGYAETVLATVPESKRVLVTAHDAFGYFGQSYGFEVLGV
QGISTQSEAGLNRIAELVDTLVSRKITAVFVESSVSDRSVRALIEGAAAQGHQVHVGGELFSDAMGPDGS
YEGTYLGMLDHNITTIAAALGGQVPTRGMDGKLSAGF
>gi|56698191|ref|YP_168563.1| deoxyribose-phosphate aldolase [Ruegeria pomeroyi DSS-3]
MKKDHQAAWLLKAITLIDLTTLSGDDTVGRVRRLCAKARQPVAPALLEALGMGPITTGAVCVYHDMIETA
VEALKGTGIPVAAVSTGFPAGLSPFHLRVAEIGESVAAGAEEIDIVISRRHVLTGDWQALYDEMKAFRAA
CGHAHVKAILATGELGSLRNVARASLVCMMAGADFIKTSTGKESVNATLPVSLVMIRAIREYYDRTGYRV
GYKPAGGISKAKDALVYLALIKDELGDRWLQPDLFRFGASSLLGDIERQLEHHVTGAYSAGYRHPMG
>gi|56698192|ref|YP_168564.1| aldehyde dehydrogenase family protein [Ruegeria pomeroyi DSS-3]
MSIKELFDTMEYGPAPESAAEALAWLVDQGDRFGHFIDGAFTAPGDGFDSRNPATGEVLATLTQATQADV
EAAVAAARKAQPKWAALGGAGRARYLYAIARLMQKHSRLFAVLETLDNGKPIRESRDIDIPLAQRHFYYH
AGMAQLMESELPDAEPLGVCGQIIPWNFPLLMLAWKVAPALAMGNTVVLKPAEFTSLTALLFADICQQAG
LPKGVVNIVTGDGAVGEMIVAADVDKIAFTGSTAVGRHIREATAGRGLELTLELGGKSAYVVFDDADIDS
AIEGLVDAIWFNQGQVCCAGSRLLVQEGIADRFYTKLRARMDGLRLGNPLDKCIDVGAVVDPVQLQTIER
MVASNTAGQVHHAACALPENGCYYPPTLITGLSTSDPLMQEEIFGPVLVSTTFRTPAEAVELANNTRYGL
AATVWTENVNLALDIAPKLVAGVVWVNATNLFDAAAGFGGVRESGFGREGGWEGLAAYTRPKGKRKALAR
IEPTMGHGAPVDPIDRTAKLYVGGKQARPDGGYSRPVWGKSGLLGHVGLANRKDVRNAVEAAAGASGWAK
TTGHLRAQILYYIGENLSARAAEFTHRIDAMTGKRSGAKEVEASIQRLFTAAAWADKYDGQVHGVPIRGV
ALAMKEPVGVIGALCADEAPLLGLVSVMAPAIAMGNRVVLAASEPYPLAATDFYQILDTSDVPAGVVNIL
TGSHAELARPLASHLNVDAVWSFSSTDLSAEIETAAAGNLKRSWVNNATSLDWSVDHSKRFLQAATEIKN
IWVPYGE
>gi|56698193|ref|YP_168565.1| short chain dehydrogenase [Ruegeria pomeroyi DSS-3]
MDFTGKTVVVIGGTSGINRGIALAFARAGARLAVASRSQDKVNDTVAELRAAGAQEALGASFDVRDAEAV
AAGLQGFRDRLGEFDVLVSGAAGNFPALTAEMSINAFKTVIDIDLMGTVHVMKGAYPHLKRPGASIINIS
APQSWLPYEGQAHVCAAKAGVDQITRTLSLEWGPEGIRVNSVVPGFIEGTEGAKRLAPSPEAEKSFKKDV
PLGRWGQPQDVANACLFLGSDMASYVSGTVLSVDGALYQRGSGRAGQMIGQMLRAMPKPG
>gi|56698194|ref|YP_168566.1| M16 family peptidase [Ruegeria pomeroyi DSS-3]
MRAFVAALTALVLALPAWAEVRIQEVTSPQGHNAWLVEDHSIPFTALEIWFQGGTSLDAPGKRGATYLMA
GLIEEGAGDLDARAYARKLEELAASFDYDVTDDTLSVSARFLTENRDEVIDLLGTTLHAPRFDQDAIDRV
RAQVLSGLRSDETDPHSIAGAALSEAVYGEHPYATEGKGTIDSVSALTREDIVAAFKGALARDRVYVGAV
GDITAEELGVLLDRLLSQLPETGAPIPERAQVSVPGPVRVVDFDTPQSVALFVQPGIDRDDPDFFTAYIL
NHIIGGGGFESRLMQEVREKRGLTYGVYSYLLPKDLASIYMGSVASANDKIAEAVNVIRDVWRDVAANGV
TAKELEDAKTYLTGAYPLRFDGNGRIANILAGMQIQGLPIDYIATRNDQVNAVTLEEINTFAAGFLDPEG
LSFTVVGKPVGLEGTN
>gi|56698195|ref|YP_168567.1| M16 family peptidase [Ruegeria pomeroyi DSS-3]
MRMIRAFALITALVTAAPLWAAPDGHEAVTTFTLQNGMEVVVIEDHRAPVVQQMVWYRAGSADEPVGSSG
VAHFLEHLLFKATDTMEAGELSATVAANGGADNAFTSYDYTAYFQRVAADRLELMMRMEADRMRNIRLTE
RDIETERDVILEERNQRTENNPRALFGEQMDAAQFLNHRYGVPVIGWKHEMETLDMEDALSFYRTYYAPN
NAILIVTGDVEPEAVRVLAETYYGVIPANPDLPERFRSQEPPQTAARRLTFKDARVAQPYVHRSYLAPER
DAGAQETAAALYLLAELLGGGTTSYMNEKLQFDSQTAIYTGAFYGGLSLDDTTFDMIVVPAQGVSLSEAE
AAMDKVLADFIAEGVDAEDLERIKMQLRAALIYERDNVDGIGNRYGAALASGLTIADVQAWPDVLQAVTG
EDIIAAARAVLRPEVSVTGWLTNVEEVTQ
>gi|56698196|ref|YP_168568.1| hypothetical protein SPO3372 [Ruegeria pomeroyi DSS-3]
MTGARICDKTRRNRQEMTMRAPLALIVITTALAVSGCSSKGLRDIRSQGTGPDEFAIMPVKPLTQPQDFN
VLPAPTPGGANLTDPTPAADAVVALGGRETALQAGGGIPASDQALVNASSRYGVPANTRTALAEEDAGFR
KRQARWTRVRLFPVDRYEQAYRKDAINPFNQNERFRRAGAATPSAPPESE
>gi|56698197|ref|YP_168569.1| lipoprotein signal peptidase [Ruegeria pomeroyi DSS-3]
MRARLLFWSAFWAFLIDQISKYLVVHVMDVAHRGSIEVLPPFLTFRYGENRGINFGLFQGESDAARWILI
GLSLVICAVVVVWLSRGRPSRWMLIGGGLLIGGALGNVIDRLIYGYVLDFLNMSCCGINNPFVFNVADIF
IFGGAAALILLDGKKPS
>gi|56698198|ref|YP_168570.1| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase [Ruegeria pomeroyi DSS-3]
MTDLSPVRRALLSVSDKTGLIELGQALAARGVELLSTGGTAKALRDAGLTVRDVAEVTGFPEMMDGRVKT
LHPMVHGGLLALRDNADHVAAMEQHGIAGIDLLVVNLYPFEATVAKGADYDDCIENIDIGGPAMIRAASK
NHAFVNVVVDVADYDALLAEMAANDGQTSYAFRQRLAQTAYARTAAYDAAVSNWMADQLALEAPRRRAFA
GELKQTLRYGENSHQQAAFYTDGSNRPGVATARQLQGKELSYNNINDTDAAFELVAEFAPENGPACAIIK
HANPCGVALGATLSEAYQKAFDCDRTSAFGGIVALNQPLDAETAGKIVEIFTEVVIAPGASDEAIAIFAT
KKNLRLLLTDGLPDPRQPIVAMKQVAGGLLVQDKDVGHVDLTDLKVVTRKAPTEAQMADLLFAWKVGKHV
KSNAIVYVKDGATVGVGAGQMSRLDSANVAAAKAQRMATELGLPESPAKGCAVASDAFFPFADGLLEAAA
AGGACVIQPGGSMRDDEVIKAADEAGLAMVFTGMRHFRH
>gi|56698199|ref|YP_168571.1| hypothetical protein SPO3375 [Ruegeria pomeroyi DSS-3]
MASRWARFQNRLYARLSQRHKSVRAFVSQPEPRTIGSYARGRQLVAGNLLFAGYLVESQSSGLWEVEAPN
GAFDDERQGFAWLDDLAAVGDVRAREKAQRWLWGWIAEHGRGRGPGWTPELTGRRVIRWINHAPFLLRGV
EPEQSHAFFRSLGQQTWFLSRRWPGAKPGLGRFEALTGVIYAGLALEGLEELADPAVRALARDCDSQIDK
EGGLPTRNPEELLEVFTLLSWATAALHEAGRGAPHAQTAAIERIAPTLRALRHADGQLGRFHGGGRGLEG
RLDHALAASGVKPVHAEGLSMGYARLSGGRTSVIVDASVPPRGAASYNAHASTLAFELTSGRRPLIVNCG
SGVSFGVEWRRAGRATPSHSTLCLDGFSSARLAEPERGTGLEALIEGPARVPVEISEMTDGIRFQGGHDG
YAKVFGLTHARTLELSHDGRGLVGEDMLLAMDDAAKRRFDKAMDASVLAGVGFDLRLHLHPEVDAAVDLG
GAAVSMALKSGEIWVFRHDGKYKLSLEPSVYLEKTRLKPRATKQIVLSGRAMEYATRIRWTLSKAQDTAI
AIRDLNRDEPEFD
>gi|56698200|ref|YP_168572.1| ribosomal RNA small subunit methyltransferase B, putative [Ruegeria pomeroyi DSS-3]
MADSATQARQSAIDLLDQILGEGRLLSECLGAGALDRLPPEERARAQRLTLDTLRGLERADRLLKPHLQK
APPLSVRNALRLGTVELAHGEAAHGVVHSMVEIVGRSRRHGRLKGLVNAVLRKVAADAPSAWGRLRVPRL
PRWLRDPLVQAWGAPAVAAMEAAHFVGAPLDLTLKSGASAPGGEVLPTGSVRLHDAGQVSALPGFAAGDW
WVQDAAAALPVQLLDPQPGESVLDLCAAPGGKTMQLAAAGARVTALDISEGRMARVRENLARTGLSAETV
VGDALEQGGQYDAVLLDAPCSATGTIRRHPDLPLAKDGSEFGALIELQAQMIAHAWTLVRPGGRMVFCTC
SLLPDEGEVQVEEALTLYPDMSTDRAALGLPGIDPAWITEEGGLRLRPDYWSERGGMDGFYMAVLRKAAD
GPE
>gi|56698201|ref|YP_168573.1| hypothetical protein SPO3377 [Ruegeria pomeroyi DSS-3]
MSEPRPDLPPAAQRALAEAEERRRKAEAETKPLPKELGGRDGPDPARYGDWEKKGIAIDF
>gi|56698202|ref|YP_168574.1| benzoate transporter [Ruegeria pomeroyi DSS-3]
MTVRPPLQTVSTGLVVAIVGFFGSFPIVLQGLTGVGADAAQAASGLMFAALSMGISGILLSLWTKAPVSV
AWSTPGAALLAVSTLPQDGFGGAVAGFIMAGALTVIAAWWRPLSRLTAAIPGPIAQAMLAGVLFALCLRP
FQALAEIPLLALPILLTWFIASQISRPFAVPAAVIAGALVVTVNAGFDIPAPEAIFAAPVWVTPVFSLEA
LTNIALPLFIVTMATQNVPGLAVLRAYGYQPRPAPLVAGVGAASVLSAPFGSPATCLAAITAAMCANEES
HPDPTQRYWSAVMGGLFYCLLGLFAGVITGFAALAPALVLGTVAGVALLGVFAGSALAALEDPDCRQAAA
VTFLITASGVTILGLSAAVWGLVIGGLMQMISSRIRRART
>gi|56698203|ref|YP_168575.1| LysR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MPPLDWLRVFEAAGRLGGFSAAAREFGLTQAAVSQRIGNLEAWLGRALFVRGPRGVTLTVEGESYLPLVQ
ESLSALARSTEDLFGTAPTELRVAGLASHIEALVMPRAAAFLAAHPGVRLMSDSAARRAGLDEERTWLQI
RFGRGVWPGREALLIAPEILTPMAAPGLGWSAGIIDLRGERPGWRDWARLAGAMPEGQARLSVDSMGHAL
TAAEQGGGVVLGSLPLARAAMVEGRLCRLQAPEMATRDGYWLTWPTDRLTARRQRALVEGFHAALIREDL
>gi|56698204|ref|YP_168576.1| gamma-butyrobetaine hydroxylase, putative [Ruegeria pomeroyi DSS-3]
MLRQVTHTDQIVTLEFADGTITRFHAVWLRDNALDPETRAPGNGQRLITISDIPADLSIGAAALAGDALS
LTFLPENKTVTFPADWLAAHAYDRDQEHPIGWTAPGITTWQSGIAAPGADWTAVHANPAVKRDWLAAVAE
FGFARLTGGPTEPGALLRVADLFGYVRETNYGRYFEVRTEVNPTNLAYTGLGLQAHTDNPYRDPVPTLQI
LYCLENSATGGDSIVVDGFRAAERLRDANPEGFALLCGYPARFEYKGSDGVCLRARRPMIELSPDGQLVA
IRFNNRSSAPFVDIPFDRMEAYYAAYRQLAELIDDPAMGVAFKLEPGESFIVDNTRVLHARTGYSGAGSR
WLQGCYADKDGLLSTLAAMEAAGLEAAE
>gi|56698205|ref|YP_168577.1| hypothetical protein SPO3381 [Ruegeria pomeroyi DSS-3]
MTVDFTTLDRGNIVAFLADIFARRGGEEYLGEPVTMAQHMLQGATIAEQNGLPEEIIVGALLHDIGHFTS
EFGTYHPDDTEDRHHEDAGEAVLAPFFPPVITDCVKYHVAAKRYLCATRPAYFARLSPASVHTLELQGGP
MSTEEVADFERNPNLEAIIQVRYLDEAGKRADMETPGFDHFAPMVQRMVDRHLLEV
>gi|56698206|ref|YP_168578.1| aldehyde dehydrogenase family protein [Ruegeria pomeroyi DSS-3]
MIEKRDFYINGAWVAPAVSNDFQVINPSTEEPCAVISLGSEADTNAAVAAAKAALPGWMATPVAERIALV
EKLIEIYHTRGEDLAQAMSLEMGAPIDMSRSQQVGAGTWHLKNFIRAAKAFQFERPLGDHAPNDRIIYEA
VGVAALITPWNWPMNQVTLKVGAAAIAGCTMVLKPSEQSPLNAMIFAEMMDEAGFPPGVFNLVNGDGAGV
GSQLSTHPDIDMVSFTGSTRAGTAISKAAADTLKKVHLELGGKGANVIFADADDKAVKRGVLHMMNNTGQ
SCNAPSRMLVQRPIYDQAVETAAEVASKVTVGNALDEGRHIGPVVNELQWSKIQDLIQKGIDEGARLVAG
GTGRPEGLNKGYYVRPTVFADANNQMTIAREEIFGPVLTMIPFDTEEEAIEIANDTPYGLTNYVQTQDAT
RANRMARALRSGMVEMNGQSRSAGSPFGGMKQSGNGREGGVWGLEDFLEVKAVGGWAAE
>gi|56698207|ref|YP_168579.1| thiol-specific antioxidant protein [Ruegeria pomeroyi DSS-3]
MGLRINDIVPNFEADTDKGRIAFHDWIGDSWAILFSHPKDFTPVCTTEFGAVAQLADEWAKRNTKVIGVS
VDGVEDHKKWKGDIESFAGTSAGFPIIADEGLAVSKAFDMLPADAYLPDGRTPADSATVRSVFIISPDKK
LQLSMTYPMSVGRNFAEVLRALDGLQRTYQQPLATPANWQTGQDVIVALALDNAAAEEKYGALDIKLPYL
RFAKNPG
>gi|56698208|ref|YP_168580.1| FkbM family methyltransferase [Ruegeria pomeroyi DSS-3]
MASLKRWLDLRRNPWKAEHYAGLKAWRADDALKTRFYTYDDLAPGAVVLDVGGFEGGWADRVLTVQAEAR
VHVFEPHPRFADALRSKFAHRPNVSVHDFAIGGAEGTLTLSDDGDASSAFGGQGGALTAPVRPVGAVFAE
LGLDRVDLMKVNIEGGEYDLLPALLDSGLMPRIARLQVQFHLFEPALIETRAAICARLAKTHDCAWCYPF
IWEEWRLR
>gi|56698209|ref|YP_168581.1| glycosyl transferase family protein [Ruegeria pomeroyi DSS-3]
MCRIAGQRFRSDLWSGTGPFCFRTVGCPLQEAERSAEMNLMGLVIHLERATDRRAQANALVSQLPFAALL
PAVDGAAMGADARARAVQPGLLKPAYPFELRPGEIGCFLSHRAAWARLVESEAEAALIIEDDMALEAGFA
DALALAQRNVAQMGYIQFQTRPVTAPAIDQQGQSVLMQPGLTPLRTSGQLVARWAAERLLALTEPFDRPV
DTFLQMHWHTGLRLGVISPSGLSDRTEVIGGSTIGAKKSLVERLTREWHRARYRAAVRRLSRG
>gi|56698210|ref|YP_168582.1| hypothetical protein SPO3386 [Ruegeria pomeroyi DSS-3]
MPEIDERRAAIVARYAESKNRRDIDAALMLCSDRMILHSASLDMVSTFRGHKAIQAGMLRFYKLFSEYSG
ETHTRWQAGIALVSKGEVTLRVNPDLLADPSTSISVVAPFLAVFEFDGDMIAGERYYPGFEYAGILKRLK
PAVRMAIAANRLTSGVFNRA
>gi|56698211|ref|YP_168583.1| hypothetical protein SPO3387 [Ruegeria pomeroyi DSS-3]
MQPYEFLPEGFWRKDSPPNARVKRTVDGQIRRDVVVVGGGYTGLSSALALAQQGYSVAVLERGVIGSGAS
AYNCGHVGIQLGKNPYLTLNKLGLERTRMYADVLTQAIANVGTIVSQSGIDCHYRAIGNLTAGVSEPQRR
DVENTFEACDKVGLPVKMLDRRDLSQMDAPAFVDSAFHELIGGDIQPALYVQALAKLAEDAGVEIYEDCS
VTRVNTSGHVRADTANGAVLADMAVIATNAYSGEIGLLRRSIMPWSVSVMVTEPLTPHQRACIGWRNGEP
IHTPHQMIENIRLTHDGRILIGTKRARLGWGDRHPPANDPVTFQLLFEVLRDRFPEIPDLRPAYTWSGRV
AISSDLLPFFDHFEGRKNVVIAAGYGGHGLPMASYSGTIIADMLLGNNTDRAALFVNRKRRLPIPPEPLR
WVVGHAMKRKMVEADSIIDAAARRELSARRALPRIVRTTYAGD
>gi|56698212|ref|YP_168584.1| TetR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MPTQNRREESAAATRQLLLDAAARMFSQQGFAKTSLSDIAARAGATKGALYHHFSGKEALYASCYEQQAA
KVAAIVRAAGTSGDPWQDTLEKCRAFLGCARLRHLNAVPIQEAIIVLGWQRWRELDSAHTMGELELALAR
LSDAGLLGSFDRRLLADSLFAVLVSAMMTLSESRDRAATEAELMRQLSAFLSGVMSASNRPIESEGT
>gi|56698213|ref|YP_168585.1| polynucleotide phosphorylase/polyadenylase [Ruegeria pomeroyi DSS-3]
MFDVTTKSMQWGEETLTLESGKIARQADGSVVATLGETRVMANVTFAREQKPGQDFFPLTVHYQEKYYAA
GKVPGGFFKREARPTEKETLTARLIDRPIRPLFVPGFKNEVLVMCTVLSHDLVNDPDIVAMIAASAALTI
SGVPFMGPIAGCRVGYVDGEYVLNPTVDDMQDLRLNPEQRLDLVVAGTKDAVMMVESEAYELTEAEMLGA
VTFAHAQIQPVVDLIVSFAEQCAKEPFDFTPPDYSDLYAAVKAAGEEQMRAAFAITDKQERTAAVAAARE
AIKAALTEEQLADGNLGSALKKLEAGILRGDVVKGGKRIDGRDTTTVRPIVAETGLLPRTHGSALFTRGE
TQGLVVTTLGTGDDEQFIDALHGNFKSNFLLHYNFPPYSVGEVGRVGSPGRREIGHGKLAWRALQAVLPA
PTDFPYTIRVVSEITESNGSSSMASVCGGSLSMMDAGVPLKSAVAGVAMGLILEDDGSYAVLTDILGDED
HLGDMDFKVAGTENGITSLQMDIKVAGITPEIMEKALSQAKDGRMHILAEMNKALSGAADFSVHAPRIET
MQIPTDKIREVIGSGGKVIREIVEVSGAKVDINDDGIIKIASPNGDSIKKAYDMIWSIVAEPEEGQVYTG
KVVKIVDFGAFVNFFGKRDGLVHVSQIENRRLNHPSDVLKEGQEVKVKLLGFDDRGKVRLSMKVVDQETG
EEIVPEKKEASEAE
>gi|56698214|ref|YP_168586.1| hypothetical protein SPO3390 [Ruegeria pomeroyi DSS-3]
MMTILALSRRMDGNASPVRSDAPVLENEAMMTHVIPTAPIEAYKTQARRLRDDLHAAGTPVSHSRALELV
AHQHGARDWNTLVAGAGNRLRFSVGDRVSGTYLGQPFTAEIRGLTLLGDGSHRRITLHFDQPVDVVRFDS
FSALRQRVSGVIGWDGRSSHCTSDGQPQLIVRPV
>gi|56698215|ref|YP_168587.1| alpha-1,2-fucosyltransferase, putative [Ruegeria pomeroyi DSS-3]
MITTRLHGRLGNQMFQYAAARGLAARLGTQVALDTRLAESRGEGVLTRVFDLDLAQPDQLPPLKGDGLLR
HGAWRLLGLAPRFRREHGLGYNAAIETWDDGTYLHGYWQSERYFAHIAARIRADFAFPAFSNSQNAEMAA
RIGDTDAISLHVRRGDYVALAAHTLCDQRYYAAALTRLLEGVAGDPVVYLFSDDPAWARDNLALPVQKVV
VDFNGPETDFEDMRLMSLCRHNIIGNSSFSWWAAWLNAHPGKRIAAPASWFGDAKLHNPDLLPPDWLKIE
V
>gi|56698216|ref|YP_168588.1| ribosomal large subunit pseudouridine synthase A [Ruegeria pomeroyi DSS-3]
MSDDYNPPQDPLDVLHEDAELIVLNKPAGLLSVPGRGAHLADCLLSRVQAAFPGALLVHRLDRDTSGVMV
FAQTPHAQRNLGRQFEERKTRKTYVARLWGRLEPKTGTVDLPLIVDWPNRPRQMVCHETGKPAVTDWRVL
RYEGDTTRVRLLPRTGRSHQLRVHCQALGHPILGDPFYATGAAQAFPRLMLHSEELRLKHPESGRSMTFR
APAPF
>gi|56698217|ref|YP_168589.1| hypothetical protein SPO3393 [Ruegeria pomeroyi DSS-3]
MHPTIARMQEVVAKGDESLIHALLAEDVRFMPPTYYKTWTGRDPVAAVLGHVGQVFSEFRYRRIMGEGKD
WALEFQCKVGELDAVGVDLITLNEGGLIQDFEVVMRPYKTVGALRDAMNARVMTDARFLKYREALS
>gi|56698218|ref|YP_168590.1| GDSL-like lipase/acylhydrolase, putative [Ruegeria pomeroyi DSS-3]
MPVLAAQGLAVRRKAQLLPEPAGPRTGRAGSGPQLRLLIAGDSSAAGVGAATQDEALSGRLVARLAEEFT
LDWRLEATTGHTTRDTLDRLTRLGGPFDIAITALGVNDTTRATSARGFARRQAALLDHLTGPLGARMVIV
TAVPDMALFPALPQPLAWVLGAQARRLDHALQRVVQRYPSALHHHPIIPPDPAMAARDGYHPSPLAYDRW
AEGLAALIRAQAVRRICRSIGTE
>gi|56698219|ref|YP_168591.1| RarD [Ruegeria pomeroyi DSS-3]
MSDQRPENVDTPKGLALAITAYLLWGFLPLYMKLLAHVPSIEVVAHRVIWSVPVAGALLVALGRTRDLRA
ALRNPRMLGMACLTAALISVNWAIYVWSINNGRALDAALGYYINPLFSIALAGLFLGERLSRAQIGAILL
AAAGVAVLIVQAGELPWAALGLTFSWGFYALFKRSLPIGPNQGFLLEVLILTPFALAYVLWLMAQGQGHF
GGFGADSLLLAGAGVVTAVPLLFYANGAKLVRLSTMGILQYIAPTMIFISAVALFGEEIDRGRMIAFPMI
WAALVIYSVPMLRQMRRTA
>gi|56698220|ref|YP_168592.1| FAD dependent oxidoreductase/aminomethyl transferase [Ruegeria pomeroyi DSS-3]
MADLPTQARVVIIGGGVVGCSVAYHLTKLGWKDVVLLERKQLTSGTTWHAAGLIGQLRASSNMTKLARYS
AELYMGLEAETGVATGMRQVGSVSVALTGERLEELYRNAAMARAFGVPVEELSPAEVKERYQHINLDGVT
GGVWLPTDGQADPANIALALAKGARQRGAVVKERIKVTGIAKQGRRVTGVDWISDDGSEQGHIACEMIVN
CAGMWGHQVGRMAGINVPLQACEHFYIVSEPIQGLTQMPVLRVPDECAYYKEDAGKMMLGAFEPKSKPWG
MDGIPDTFEFDQLPEDFDHFEPILEAAVNRMPMLGSAGIHTFFNGPESFTPDDAYHLGLAPEMDNVWVAA
GFNSIGIQSAGGAGHALSQWMDSGEKPFDLGDVDIARMQPFQGNKRYLVERSTETLGLLYADHFPYRQKA
TSRGVRRTPFHEHLKANGAVFGELAGWERANWYARPDQEREYRYSWRRQNFFDNVAEEHKAIRTGLGMYD
MSSFGKIRVEGPDATAYLNHIAGGQFDVPVGRIVYTQFLNVNGGIEADVTVTRLSETAYLVVTPAATRYA
DQTRMMRLVGDFRVVITDVTAGEGVLAVMGPKARELMARVSPNDFSNDVNPFGTAQEIELGMGLARVHRV
TYVGELGWEIYVSSDMAGHAFETLFEAGQDLGMKLCGMHVMDCCRIEKAFRHFGHDITPEDHVLEAGLGF
AVKTDKPDFIGRDAVLRKKDEGLKTRMVQFRLTDPEPLLYHNEPLLRDGQIVGYLSSGAYGHHLGSAIGM
GYVPCEGESAADVLASTYEIDVMGTRVRAEASLAPMYDPKSERVKV
>gi|56698221|ref|YP_168593.1| AraC family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MLKLVKAETRQKQFDIIVAPGFVLTELAALVDVLRIANRVCPNPPFAYTYRSLRGGLIESSSGAVVATER
VPTPPRADYLFVIGNSDPDQPELSLGRVVKDYTFRGAQVFLLAEAASRYINERGTADLATHWENAAFLRE
RGARFDATFSLATQQGPVVTCAGMGATVDVVLSVIGRHISGPAKMTVADIMLHEHIRDFATMQPFSGVKT
TSTGDEALDQCIKMMQANIEDPLPIGEIVAALGLSNRSLERKFKTYLGTTPNNFYREMRLAKANTLLLNT
AMSVREVGLACGFPNGFSAVYKSFYGITPFVLRRQKRAAAQR
>gi|56698222|ref|YP_168594.1| homocysteine S-methyltransferase family protein [Ruegeria pomeroyi DSS-3]
MTDITLLDGSIGQELVKRAGKRPTPLWSTSVMLEAPYHVGAVHRDYFDAGATIATTNTYAVLRDRLEPAG
IGDRFEALIDTALDQAESARAAHGSGRIAGALGPLGASYRPDICPPPEEAEALYADSVRAMNDRVDLFLI
ETAASVAQAEGALRGASLGTKPVWLSVTVMDDDGSRLRSGEGVGELAAIVKQYQPQAVLVNCSRPEAVAA
ALDIIAGFGLPFGAYANGFTRITEAFLESRPTVEALTARVDLTPEAYADFALGWVDQSATIVGGCCEVGP
DHIAHLARRLRAAGHRIV
>gi|56698223|ref|YP_168595.1| alcohol dehydrogenase, zinc-containing [Ruegeria pomeroyi DSS-3]
MTIPATMSGVYLTRHGGPEALAWRDDIPVPAPGPGQVLVRVQAAGVNNTDVNTRIGWYSSDVTGATDSGE
TGEAGGWAGALSFPRIQGGDLCGRIVALGAGVTGWATGQRVTCQINLPRPTPDNPFGFVALGSELDGAFA
EYCLLYADDLFDVTASPLSDIEIAAMPCAYGTAWNLLARCGVGPGDAVLITGASGGVGLAAVQLAAHLGA
TVTAMTAPAKAEAVTAAGATTILGRDDTPPPAQFDRVIDVVGGPLWPDLIRALKPGGHYAVSGAIAGPMV
SADLRQIYLPDITIHGATYQPREIFADLIALINAGAIRPLVSATFPLDQIAQAQAEFMTKRLPGKIVLIP
PQEHP
>gi|56698224|ref|YP_168596.1| aminomethyl transferase family protein [Ruegeria pomeroyi DSS-3]
MSDFPNKARVVIIGGGVVGVSSLYHLAKRGWTDCVLLEKNELTAGSTWHAAGNVPTFSTSWSIMNMQRYS
TELYSRLGEEVDYPMNYHQTGSIRLAHTRERMQEFERACAMGRYQGIKMEMLTPDEAKARYPFLETHDMA
GALYDPTDGDIDPAQLTQALAKGARDMGAKIIRFCPATGVTQQDDGSWIVHTDKGDIACDYVVNAAGYYA
QRVGEWFKPYGGRTVPMMVMSHQYLLTEQIPELEAWSKENGRKLPLLRDVDVSYYLRQEKNGINIGPYEP
NCRAHWDVDSDPMPDDFSFQLWSDDLDRIADIVADAMERVPVTATAGVSRIINGPIPYAPDGLPLIGPMP
GVKNAFEACVFTFGIAQGGGAGKVLAEWIVDGQTEWDMWSCDPRRYTDYTDHDYCVQKGMEVYGNEYAMH
FPWHRWPAAPDRKLSPVHDRVKAQGGVMGVYNGWERANWFAQPGDDTSEESTHTWGRSGPWEQRIKEECQ
AVRDHCGVLDLPGFSRFLVKGAGAAEALRGLITGGLPKVGRMNLVYISESRGRILTEMSCIRLGEDEFVM
ITAATAQWHDRDILLGAMPAGVTVEDVTTTRDTLIVTGPKSREILAGLSDADLSQGWLTHQAATVAGQPA
FLIRVSFAGELGWEVHALNEHMPAIYDALLGAGAKPFGMWALNSLRLEKGYRAWKGDLSTDYSMLEGGLE
RFVKLDKPQDFPGKAAILAEKQRGVKKSFVTLLVEAGDCDAPYMSCLWHDGQIVGETTSGAWGYRINASV
ALGMVRADLAVPGTELEVEIYGQKCRAVVQPDAPLWDPENERLRA
>gi|56698225|ref|YP_168597.1| hypothetical protein SPO3401 [Ruegeria pomeroyi DSS-3]
MIKGSCLCGDIRYTTEAAPQGASMCHCGQCRRQSGGVWSSAFVPEADLTITGPVSWFAASDTAKRGFCAR
CGSFLFWKANDEDTISFSLGSVDGPTGLRLTKHIFVAGKGDYYDIADDAPHKD
>gi|56698226|ref|YP_168598.1| amino acid transporter LysE [Ruegeria pomeroyi DSS-3]
MSFEAWTIFALFWILFAATPGPNAVNCISNGMSLPFGKALLGVLAILTQASVFLLLSALGVTALITASPT
LFLVAKLAGAGFLIWLGIRGWRNAAKPVPTAVRPARHVYLHALAVATLNPKSVAGYLAAFSQFVQPDVPI
WQQMGVIMPTALIITALCYTTFTLLGALMGRAALGAVFSTWLRRGMALCFIIYGVLLGTSAAPATRG
>gi|56698227|ref|YP_168599.1| DNA-binding protein, putative [Ruegeria pomeroyi DSS-3]
MNTQAPSSATLGADLRALRKARGLTLSEIAARLGRSVGWLSQVERDMSEPSISDLRQIAGCLGVPMSMLF
AHAAAPAEEQGYVVRAGARRPMGSGEEGLIEELLSPDLTDDFEMVHSTFAPQSRMQTPANRPTQEVGYML
SGRLELTIGGRQFSVGPGDSFRIRHEPYQWANPHDEPAVAVWVIAPPVY
>gi|56698228|ref|YP_168600.1| hypothetical protein SPO3404 [Ruegeria pomeroyi DSS-3]
MWNAILYLWVLNGLTVALFAWDKLCARWNRGRVPEHLLLWLSALGGSPAALLSRWLFRHKTRKQPFGRWL
WSIVLFQITALVILLGKDLL
>gi|56698229|ref|YP_168601.1| hypothetical protein SPO3405 [Ruegeria pomeroyi DSS-3]
MTVDYPSLAKTIAALTEGETDPVALMATVTCEVHHSDDRFNWTGFYRVTEPGVLKIGPYQGGHGCLRIPF
DKGVCGAAASTGEVQLVPDVDAFPGHIACASSTRSELVLPVFGRTGALIAVFDIDSDLPDAFTVADAEAL
GAILEQVFAQ
>gi|56698230|ref|YP_168602.1| TetR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MKDDSRAERQQQIEEAAYTLLEQKGYAGTSMQGIARLARASNETLYSWYGDKQGLFRALVIRNAAEVRAQ
LEADLAAARPPRDTLTALGPRLLSLLLGDRAVALNRAAAADPSGELGGLIAQSGRDSVMPLIVQVLEAAR
AEGLLHFDDAGAAAGLYLDLLVGDQQIRRVIGRLPAPSEAACQARGAAAVTHLCRLLG
>gi|56698231|ref|YP_168603.1| hypothetical protein SPO3407 [Ruegeria pomeroyi DSS-3]
MTQTDRPCLAALVILILLQLIMLFSLFAGVPPHPPIATPLFGIGPFIGASVSAAIAAIVLGESRAARVLA
LLAVLGALVSFGPQKYLDPQFPLIWPAVIAAQLAAITVLVRLLPALSRQDA
>gi|56698232|ref|YP_168604.1| acetyl-CoA C-acetyltransferase [Ruegeria pomeroyi DSS-3]
MKEVVIAGAARTPMGGFQGMYDGVSAAELGGAAIRAALAGAGAATVDEVLMGCVLPAGQGQAPARQAGFA
GGLGEEVPATTLNKMCGSGMKAAMIAFDQIALGQTGTMIAGGMDSMSNAPYLLPKMRGGARIGHGQVIDH
MFLDGLEDAYDKGRLMGTFAEDCAEHYQFTREAQDEYALRSLQNALEAQASGAFDGEIAAVTVKTRKGEV
VTDADEQPKSARPDKIPTLKPAFRKDGTVTAANASSISDGAAALVLASAEAAAAQGLTVRARILGHASHA
QAPGWFTTAPVPAAKKLLANIGWSVEDVDLWEVNEAFAVVPMAFMHEMGLSRDKVNVNGGACALGHPIGA
SGARIMVTLLNALEKRGLKRGVAAICIGGGEGTAIAIERV
>gi|56698233|ref|YP_168605.1| anti-anti-sigma factor [Ruegeria pomeroyi DSS-3]
MSLTSTVDGDTRVITVNVERIDAAMAIQFKEDMRSETEEGPDRVVLDLSQVTFIDSSGLGAIVASMKQLG
GNRRLDLAGLTPVVDKVFRLTRMDTVFNLFTTLDDALAASPK
>gi|56698234|ref|YP_168606.1| anti-sigma B factor, putative [Ruegeria pomeroyi DSS-3]
MQFNANRQGFALNFRATEMEAREGIRAVATQLRQRGLSEDRAGDVEIALAEAINNVVEHAYADIEPGQVR
IRCQMRDDKLLIRISDQGRPLPDGQLPKGEPANVETDPADLPEGGFGWFLIRQLVSEIRYERRQNSNLLS
LRFDLPKVS
>gi|56698235|ref|YP_168607.1| gamma-glutamyltranspeptidase, putative [Ruegeria pomeroyi DSS-3]
MRDFHLPGRSPTYATEGMCATSHPLAAQVALDLLKRGGNAMDAALAAGLVLGICEPQMTGIGGDCFVLYS
RAGEDQIRALNGSGRAAAGASAAALREQGLDRVPLGSPHAVTIPGAIDAFCHLAETEGRLGLDTLLQPAI
HYAERGVPVAPRVAFDWAREAGTLQGAARHHYLLDGRAPVTGQVFAAPGQAEVLRRIARLGRDGFYTGEV
AEDMLAALNALGGPHRAEDFGATACTPTEPISGTYKSTELVEHPPNGQGATAILLLNILSQFDIAAMDPL
GAARIHIEAEAAKLAYDARNRFLADPDHTDRLDHMLAPETAARLAALIDPKRAMAAAAPLTEAVHKDTIY
ITVVDRDRMAVSLIYSIFHGFGSGIASEKFGILLQNRGAGFTLQAGHPNEMAGGKRPMHTIIPGMLREGP
GTLTPFGVMGGAYQPVGHARFASNLVDFGMDPQTAIDAPRAFADAGVLKLERGYPDAVRQTLADMGHKVV
TPEVPLGGAQAIRIRADGVLEAASDARKDGCALGY
>gi|56698734|ref|YP_168608.1| hypothetical protein SPO3412 [Ruegeria pomeroyi DSS-3]
MTMMKSHAKYHLGQVVRHRKHPFRGVVFDVDPQFANTEEWYQAIPEDSRPLKEQPFYHLLAENDQSYYVA
YVSEQNLIADYSGEPVDHPDIPDMFGPFQDGTYPLHFQLN
>gi|56698236|ref|YP_168609.1| auxin efflux carrier family protein [Ruegeria pomeroyi DSS-3]
MNLAVTVLEIVAPVFLLAAVGFGWVRMGFEYRLQFVTRLGTMLAVPCLIFVALMKTEIPGGDLSRFTLAS
ALAILALTVVFGLIVRFSGLDRRTYLPPLLFGNTGNLGLPLCMFAFGIEGLSYAVVFFSLSALWSFSYGI
HVVAGQGSLSKVVREPMVWATLLGALFLSQDWQTPRFLTNALELIGQMAVPLMLITLGVAMARLSIRRIG
QALGLSLLKLAICFPVGWLVAQGFGLSGPALGVLVVQMSVPAAVSAYLLAERFGADADAVAGMVMVSTLL
AVGALPLVLAAVL
>gi|56698237|ref|YP_168610.1| putative lipoprotein [Ruegeria pomeroyi DSS-3]
MSRSLCALVAVLLLVSCSGGSKNPPRNLDDACSIAGERPEYIKAFKQTERKWGVPVHVQMSTIYYESRYR
ADARTPHQFVLGVIPVGRQSSAYGYSQALDGTWDQYRKETGRRGAKRDRIKDASDFIGWYMNKTRERNGI
ALGDARNQYLAYHEGHTGYARGSHNGKSWLLRTADDVAARANMYQRQLSSCRRYRG
>gi|56698238|ref|YP_168611.1| outer membrane lipoprotein carrier protein LolA, putative [Ruegeria pomeroyi DSS-3]
MKRIALALALTLVAPAAWAADKLPLAEISTYLNGLKTVQTTFTQINDDGSLSTGKLWLHRPGRMRFEYDP
PDRSVVLAKGGTVIIHDPKSNQPPEQYPLNRTPLSIVLARTVDLDRANMVVGHAFDGTATVVTAQDPENP
DYGRIELSFTGDPVELRKWVIHDGAGSRTTVILGQLTKGNSLNQNLFIDGQPGVSVNR
>gi|56698239|ref|YP_168612.1| FtsK/SpoIIIE family protein [Ruegeria pomeroyi DSS-3]
MASYHARSRDPLLDSNMQAAIERRGKELLGLALIVLGLLAAAMVGTYTPDDPNWMVSTDAPVQNWTGRIG
ASIAAPLFMIVGGGAWGIPLVLIAWGLRFALHSGEDRAIGRLVFMPIWIAVVSVYAATLVPGETWRATHS
FGLGGLFGDTVMGALLTLVPLGSHLMVKLTSLAMAVVMLTMAAFVLGFTWPEIRRGLRHAMVGAILVYGG
VMTLLGRGASAGVAAARARQALRAERREASRRAAEEARMAEEAAYAEALVEEDDFPEPAPQPKPGLLARM
PALIRRSEPMPQPELIEPEPVQGYDVMPGTERIASKIAAVVRSRKEAAGVVAPPPDPQRPLTKGRGRGPD
PLLLDTRRRGDLPAEPPVTAARAPQATQVQAPVQAAPEQHAPVTTVPSAFPDMSQAAGFRAMPTEEFDQD
WELEERFEPDPLPTDDAEPYQAAPTPQPQPMPNIPAAQPRKPVVAQPVRRNPVPSRRAQAEAQPTLAFEE
SSVAFELPPLNLLSNPTSIQRHHLSDEALEENARMLENVLDDYGVKGEIVSVRPGPVVTMYELEPAPGLK
ASRVIGLADDIARSMSALSARVSTVPGRSVIGIELPNEHREKVVLREILASRDFGDSNMSLPLALGKDIG
GDSVVANLAKMPHLLIAGTTGSGKSVAINTMILSLLYKLTPAECRLIMIDPKMLELSVYDGIPHLLSPVV
TDPKKAVVALKWVVGEMEDRYRKMSKMGVRNIEGFNGRVREALAKGEMFSRTVQTGFDDDTGEPVFETEE
FAPEVLPFIVVIVDEMADLMMVAGKEIEACIQRLAQMARASGIHLIMATQRPSVDVITGTIKANFPTRIS
FQVTSKIDSRTILGEMGAEQLLGQGDMLYMAGGAKITRCHGPFVSDEEVEEIVNHLKQFGPPDYIGGVVE
GPDDDKADNIDAVLGLNTGGNTDGEDALYDAAVAIVIKDRKCSTSYIQRKLAIGYNKAARLVEQMEDEGV
VSSANHVGKREILVPEQG
>gi|56698240|ref|YP_168613.1| aminotransferase, classes I and II [Ruegeria pomeroyi DSS-3]
MNFPERFSNLPAYAFPRLRALLDHHPAGGEVVHMTIGEPKHAFPAWVTDVIVENAHLFQSYPPNEGSPEL
RGAITDWIARRYGVTLDPEKNVMALNGTREGLYNAAMALCPEQKNGQRPIVLCPNPFYQVYMVAAISVGA
EPHFVPATAATGHLPDYASLPVEVLNRTAVAYICSPANPQGAVASREYWAELIGLAEQYDFRIFADECYS
EIYREEAPAGALSVAQEMGADPERVVLFNSLSKRSNLAGLRSGLIAGGPETLKHVKQLRNYSGAPLPGPL
QAAAARVWADEAHVAENRALYQEKYALADQVFAGVQGYQPPEAGFFLWLPVDDGEAASLKAWRETGVRVL
PGAYLAQGKPGQNPGETYIRVAMVAPKQDLQRGLIALRDCIYR
>gi|56698241|ref|YP_168614.1| amidase family protein [Ruegeria pomeroyi DSS-3]
MSDWLTMTASDLGRGIAAGRIDPVALTDCYLDAIEAHPDSERIYARVTARRARAEAHAAAERARLGLRRS
LFDGVPISWKDLFDSAGVATESGSALLAGRVPEADALVLRNATAAGAVCLGKTHMSELAFSGLGLNPITA
TPPNPHDPAWVPGGSSSGAAASVSFGLAACGIGSDTGGSVRIPSAWHDLVGLKTTSGRLSLEGVVPLCLK
FDTVGPLARSVEDAAEALALLEGGRAADLRGASLKGCRLAVLQTVALDDLREEPGSAFDDALSRLSAAGA
EIVPLEVPELVDAMALSGVLYTAEAYGLWRDVIEANPDAMYDQILERFRAGAGFSGPDYVAAWARLETCR
AAWDGAVAGFDAVLMPTAPILPPDRDRLLSDHDYYVSENLLALRNTRIGNLMGLSGLSLPTGTPACGLTL
LGRPDGEEALLRVGAAAEHALT
>gi|56698242|ref|YP_168615.1| UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase [Ruegeria pomeroyi DSS-3]
MDNPEPARIVRLMEHRADIAIVGGGLNGPALALALAQSGQSVVLVDALPDPLRTDAEFDGRAYALALASQ
RLLAAVGVWDHVAEAAQPMLEIKVSDGHAGAGPSPFFLHFDHAEIEEGPMGYMVEDRYLRRALLAAMEDA
PRITRLNGAAVTAQQTDGTGVVLTLADGSHLRAGLVVGCDGRKSGTATRAGIKRTGWDYGQTALVCAIAH
ERPHHGIAHQFFMPPGPLAILPLPGNRSSIVWSERTEAAARINALPEAEYLEILRPRFGDFLGEIRLEGA
RFTYPLNLTVANAFVAERLALVGDAAHGMHPIAGQGLNAGLRDVGALAEVLILAARRGEDIGAAPVLERY
QQWRRFDTATLALATDAFNRLFSNDNPLLRLGRDVGMGVIGAFPGLRRGFVREATGLTGDLPKLMQGRAI
>gi|56698243|ref|YP_168616.1| hypothetical protein SPO3420 [Ruegeria pomeroyi DSS-3]
MTDRPAAYIICGTPRSGSTLLCGYLAATGAAGDPDSFFRTQSIDWWARYWGLPETLRPGVVGFDRAYLEA
ALREGRGETPVFGLRLMRENLGDMLGMLDHLYPGLPGDTALIEAAFGPTRYLHLRRRDKVAQAVSRVRAE
QSGLWHIAPDGREIERLAPHRDPVYDFDAIDSHVRALETYEAGWTDWFLAQGITPLGIDYEDLANTPIEV
VSAILAHLGQDPERAQGLTPAVAKLSGEESRDWARRYRAQREGRA
>gi|56698244|ref|YP_168617.1| hypothetical protein SPO3421 [Ruegeria pomeroyi DSS-3]
MSETPAAFDRRMLEALVCPVTHATLEYDAGAQELVSKGAKLAFPIRNGIPVMLVDEARPLDD
>gi|56698245|ref|YP_168618.1| ATP-dependent protease La [Ruegeria pomeroyi DSS-3]
MQSADLPDTLAVFPLPGALLLPRSRLPLHVFEPRYLQMLDDALRTPQRLIGMVQPNPCRQDGSKLHQIGC
AGRVTQFSETEDGRYMITLTGVSRFRIKSEVDGFAPYRRCTVCWKSFDHDLAAACAPDPRFDRDAFLRLL
QRFFEARDMCTDWDSLTQADDELLVNSLSMLLDFTPEDKQALLEAPCLKTRRETLVTLIEFALCGNSGKD
PLQ
>gi|56698246|ref|YP_168619.1| thioredoxin [Ruegeria pomeroyi DSS-3]
MLELGQKAAPAADLIKDTNEATFMADVVEASQTVPVIVDFWAPWCGPCKTLGPALEAAVTAAKGAVKMVK
VNVDENQMIAGQMRIQSIPTVYAFYQGQPVDGFQGALPASEISAFVDRVIAAAGGEAPGAQLEEAVVAAE
EMLEQGAAADAAETFAAILGEDPNHAAAYGGLVRAHIALGDLDQAEAILNGAPAEISTKPELEAAHAQLE
LARQASNAGPVAELAAAVEADPDNHQARFDLAQALHAAGQTEQAVAELLDLFRRDREWNEGAAKAQLFTI
FDALKPNDPIVLNGRRKLSSMIFA
>gi|56698247|ref|YP_168620.1| leucine-rich repeat-containing protein [Ruegeria pomeroyi DSS-3]
MSDADKAYAAAERRIEEAKREGDDSLSFDQEETHALDHLPPSIAELTELRDLDLNNTQVSDIAPLAALTR
LNALSLNDTQVSDIAPLAALTRLTMLSLNNTQVSDIAPLAALTRLTGLWLHNTQVSDIAPLAALTRLTGL
SLNKTQVSDIAALAALTRLTTLSLNNTQVSDIAPLASLTRLTTLSLENMQASDIAPLAALTRLIMLSLNN
TQARDLRPLRRLTRLVTDPGPIGLTFTNCTAAQQDPEIARIAKIEDNKTRARILFDYLEDWQPPRNTGPT
PAPDPLFPVAEQEGRLEVTASCPTAEEQEDALKRAMHRSLPALLERLAQMAGNQFPRLADLARHLVPMLQ
DEFEALDMAMIHLALNELRAAERAGAEEGMPFPGPLAALLSSVCDAGGGLTVDHPTVTLLMERARKARDN
PDPEQDTAAQDALSHQIIAGQQAMGDRLRALESAIVENPSAQAREAQKAVNRNVLWRIAVISSSMTMVVD
AVTGKVLGDLLGQPVVDFVLANLPTLQNAALTYGAPFAEWFLSALSKVPEFAALIVNVPDRPDRRQ
>gi|56698248|ref|YP_168621.1| exodeoxyribonuclease III, putative [Ruegeria pomeroyi DSS-3]
MPFTLATWNINSVRLREPIVCKLLAEEGPDILCLQEIKSPVDKMPVEGFADLGYRHVVAHGQKGYNGVAI
LSRLPIEEVGREDFATLGHARHVAARLENGVTIHNFYVPAGGDVPDREVNEKFGQKLDYLTEMRDWFHAN
APEKSILVGDLNIAPREDDVWNHKQLLKIVSHTPIEVDHLGQVMDSGKWVDITRQDIPQGLLYSWWSYRA
KDWSAADKGRRLDHVWATPDISNAGHSSRILRDARGWEQPSDHAPVFASFDL
>gi|56698249|ref|YP_168622.1| DNA-binding response regulator [Ruegeria pomeroyi DSS-3]
MAQLKKILLVDDDDDLREALSEQLVMTEDFDVFEAETGHAASERTKEAIYDLVILDVGLPDTDGRELCRL
MRKQGVKSPIIMLTGHDSDADTILGLDAGANDYVSKPFKFPVLLARIRSQLRQHEQSEDAVFQLGPYTFK
PAMKMLITEDDRKIRLTEKETNILKYLYRSTDGVVPRDVLLHEVWGYNAGVTTHTLETHIYRLRQKIEPD
PSNARLLVTESGGYRLVA
>gi|56698250|ref|YP_168623.1| 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II [Ruegeria pomeroyi DSS-3]
MSLIPDITELLARARADLRMGVPVVLRDEGGDSALALAAETLTAARLADLRQLGDPVIAITGRRAETLKA
RAYDGDLARVILPTGADLRWVQAVADPSDDLNTPMKGPLGTMRQGKAGLHRLAISLTKSARLLPAAVLVA
LPEGRTFAADHGLTTIDHAQAAPHLSERSPLHVVSAARLPMEVSEAGRLHVFRPEDGGEEHYAVEIGRPD
RDKPVLARLHSACFTGDLMGSLKCDCGPQLRGALAQMGAEGAGVLLYLNQEGRGIGLANKMRAYFLQDQG
FDTVEANHRLGFEDDERDFRLGSDILKSLGFKSVRLLTNNPAKIAMMERTGIAVTERVPLKVGETAHNRG
YLATKAAKSGHML
>gi|56698251|ref|YP_168624.1| hypothetical protein SPO3428 [Ruegeria pomeroyi DSS-3]
MSPWDVVLTPRGVRFWGRYLPCSIGKGGIRTDKREGDGATPVGIHRIVGMLYRADRIAPPAPWARPIGPG
DLWSDDMGDAAYNHLVSAPYGHSHERLRRSDPLYDLVLVTDWNWPEAEPGRGSAIFVHQWRRPGYPTEGC
VAFSRPHLHWLTRRVRPGTRLIIPPL
>gi|56698252|ref|YP_168625.1| alanine racemase domain-containing protein [Ruegeria pomeroyi DSS-3]
MVFFCGKPDRGDDMSLQEIKNRIARAEQAANRPDGSVKLIAVSKVQPNERVEAVLEQGHRIFGENRVQEA
AGKWPAFMERYDGVELHLIGPLQTNKARQAMELVHAIHSVDRPKLATTLARLAQELGRCPDLFIQVNTGE
EDQKAGIMPAEADGFIAECRALDLPVQGLMCIPPVEEEPALHFALLAKIAARNGLSGLSMGMSGDFESAI
ALGATHVRVGSAIFGDRVKAAG
>gi|56698253|ref|YP_168626.1| outer membrane porin [Ruegeria pomeroyi DSS-3]
MKTEGNTMKKVLFATTALIATASVAAADVRISGYGRFGLDYNDANDRAVNGVSKTTITSRLRLQFDMSAE
TDAGVAFDARFRAQAESRDNTPGGATFNGARFGVSYQGFRVNVGNIIGAVENMPGTYLETRTAGIGIDGA
SFYSHVGNVNNEFFNWDAYSSAGTGVNGIEAIYSTGGFTGHLSYSTRNGAVASDRIGVMLSYNFGDWTVA
AAHQSSDAMWEDKTLVSVAWDGGQFGARVAYADNDGISKFGIYGNMDIGASSNILLFYTDEEAVSASDVL
AGRGDNRDAVAGSNMNEGGSYGIHYSYDLGGGASFEAGYRRASNDNDTFQAGVYFSF
>gi|56698254|ref|YP_168627.1| hypothetical protein SPO3431 [Ruegeria pomeroyi DSS-3]
MTLQNAFKATLVLALCLGVAACGNRRAGVRITDAPPADDSYITNNRESAPTNYEKSSIWDVFGPSKAEQT
VQVNRYLWAASLDVLSFLPIQSVDPFTGVIVTGYGTPPGGGRSYRATVHIKDPALEARSLKVSLQTSGGS
PVSAATARAVEDAILSRARQLRIGDDKL
>gi|56698255|ref|YP_168628.1| leucyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
MSRYSATEIEAKWQEAWDKAGIFRAARTADKPKYYVLEMFPYPSGRIHIGHVRNYTMGDVIARYKLSNGF
NVLHPMGFDAFGMPAENAAMASGGHPKDWTYKNIETMVAQMKPLGFGLDWSRMFATCDPEYYGQQQALFL
DFLEKGLVYRKNAVVNWDPVDMTVLANEQVEDGRGWRSGALVERRELTQWFFKISDMSGELLDALDTLDD
WPAKVKLMQANWIGKSRGLQFSWALTEPAHGIEALDVYTTRPDTLMGASFLGISPDHPLTKALEAENPDL
AAKVAEMRKGGTTEEAIEKAEKLGADTGLRVRHPLNPDWELPVWVANFILMDYGTGAIFACPAHDQRDLD
FCRKYDLPVIDTFVALDDPKPIATEAFVPLKTEKVKWIDHFAGLDVATGQEAIDTTIDWMEAKGLGTGVT
KFRLRDWGLSRQRYWGCPIPVVHCDACGVVPEKKENLPIRLPDDVTFDVPGNPLDRHPTWRDCACPSCGK
PARRETDTMDTFVDSSWYFARFTAPRAETPTDMAEAEYWMNVDQYIGGIEHAILHLLYSRFFARAMHICG
HLPEKSKEPFNALFTQGMVTHAIYKTTGADDRPVYHYPEAVRLEGGKGYLEDGTEVEIIPSAKMSKSKNN
VVDPVAIIDRFGADTARWFVLSDSPPERDVEWTDAGAEAAHKHLNRVWNLCDRIAAMDSAAPGEGDDDLL
REMHKCIRDVTNGIESFGFNASIAKLYAFTNTLAKSKAGAAAQKQAIMTLAQLMSPMTPHLAEDIWAHQG
GEGLIAAAPWPVADEAMLVDALVTLPVQINGKRRAEISVPADMDKTQVEKLALSTDAVQKALDGAAPKKV
IVVPGRIVNVVV
>gi|56698256|ref|YP_168629.1| putative lipoprotein [Ruegeria pomeroyi DSS-3]
MWSCNRRTLLMLPVALAACGLQPVYGPGGAGDALRGRVEVSAPDDAESYWLVQNLEQNLGRTAAAGTDYL
LDVKVRTASQGQAITASNDTTRYSIVGTATYTLTGKESGAVMASGEVRSFTGYSATGSTVDTLAAERDAR
HRLMVILSDQLVTQLYATLDPPA
>gi|56698257|ref|YP_168630.1| hypothetical protein SPO3434 [Ruegeria pomeroyi DSS-3]
MKLSPREADGYFARPDAGKTGILIHGADAMRIALKRQQIIAALLGPGGEEEMRLTRMPGAELRKDAAQLL
DAVKAVGFFPGPRVVFVEDCPETSAPAVLTALEDWQPGDAQIVVTAGQLKPSSKIRKAFETHPNAYAAGI
YDDPPSRAEIERMLSAAGIRDVPPEPMTVLSDLARDLGPGDFAQTMEKLALYKLGDTAPLVLEDIAACAP
RSTEAALDDVLNVVAEGKEGEIGPLIRRLQAQGTTPVSLCIGATRHFRTLYTCASAPGGPSQGIGALRPP
VFGPRRDRILNQAQRWGARRLEAALTVLTDTDLALRSAGQSAPQMALVERAMIRLAWLSRSR
>gi|56698258|ref|YP_168631.1| glutathione S-transferase family protein [Ruegeria pomeroyi DSS-3]
MYKVYGRVKSRASRVLWLLEELGQPYEFVDVGPHDPQVKALNGSGKIPVLVDGDHVITDSSAIMTYLADK
HGQLTYPAGTPERAKQDALLHTILDEIDGVLWVAARHGFVLPEDKRVPAVIDCAKWEFERNLARLESRLG
APFAMGDKVTIVDILLVHCLNWAFGAGFPITSDRIKAYGKEMRARPAFQRMGALTPA
>gi|56698259|ref|YP_168632.1| hypothetical protein SPO3436 [Ruegeria pomeroyi DSS-3]
MKPALVIGAGPAGLMAAGELARAGLPVLVAEAKPSVARKFLMAGKSGLNLTKDEPLERLLAAYGDAADWL
RPMLAAFDAQAVQDWARDLGQELFTGSTGRVFPTAMKASPLLRAWLAELAGLGVEIRTRWRWTGWQGDAF
CFDTPEGAQKIEPLVTVLALGGASWARLGSDGAWAGVLGARGVGLTAFAPANVGVLVDWSAHMAPLAGQP
VKGVAWQAGALNSRGEAVISTRGLEGGGIYAVSAAVRQGAPLFVDLLPDLPLEQVTARLARPRGKASLSS
HLRKALKLAPESRALLMEFARPLPQAPGALAALIKRLPVQHAGLRPMDEAISTAGGVARAALDDGLMLNA
LPGTFCAGEMLDWEAPTGGYLLTGCLATGRWAGRAAAAWAQAGVNAPMR
>gi|56698260|ref|YP_168633.1| mechanosensitive ion channel family protein [Ruegeria pomeroyi DSS-3]
MQTVQVERPMELGTQTQTELLNNLLVQVERLWDIALGWVSSPAAWSQFALLVVAYLAALYAARRLRGPLS
RLLTPPVEQMDPLSRTRRFVLIFVPLLLPLLAYVFTGIGESVTRSLFGSGAVIAFGKRVFLFLAARILVR
EILDDPLMKLLGRYVLIPVAALYALGLLEPAMAKLDQTVVPLGNLSFSLLFALRFLVVGGAIFWLGRWSN
DQSVNFIKQQREMRPAMRELTAKAVEIGIFGIAFLLVMNIMGISLTSLAVLGGVIGVGLGFGLQKIASNF
ISGVILLLEGQATVGDYVELDGGEAGTIIKMTARATILETFDGRWIVVPNEDFITTRVVNFSDQGSANRY
EAPFSVSYDTDINRVPAIIEAVVATHPGVLAKPFPPDCELRGFGDSGVDFAVEFWVEGIDDGKNKFMSDV
LFLIWNALKENGIEIPYPHRVVELSGSIETRQA
>gi|56698261|ref|YP_168634.1| hypothetical protein SPO3438 [Ruegeria pomeroyi DSS-3]
MPMTDKENKCLEFPLPGRLCPLCGRPIPDGDGSQHHLIPRLKGGKGGPTVLLHVICHKEIHATLTEAELA
RSFHTIEALRSHPRLAKFLAWVRKRPPGFRSKVPGGRRKR
>gi|56698262|ref|YP_168635.1| enoyl-CoA hydratase/isomerase family protein [Ruegeria pomeroyi DSS-3]
MIELEKEGGLWTVTLNRPDKANSLTVAMLERLVEIAETAGEARALILTGRGKVFSAGADLEAARAGLATS
DLWERLSGAIAALPCLTVAALNGTLAGGANGMALACDLRIAVPEAKLFYPVMKLGFLPQPSDPVRMAALI
GPARTRLILMAGQKITAQEAYEFGLVDRIVPADQLLETARALVADSLAADPGIAAGIARLCP
>gi|56698263|ref|YP_168636.1| 20-beta-hydroxysteroid dehydrogenase, putative [Ruegeria pomeroyi DSS-3]
MTAVKGKTVLITGASRGIGAEAGRVFAQAGANVVLLARSAEALAAQAAEIGDRALALACDVADAAQVAGA
VNAAVSRFGGLDVLINNAGVIEPISHLASSDPVGWGHAIDINLKGVYYGMRAALPVMRKAGGGTILTVSS
GAAHNPVEAWSHYCASKAGAAMLTACLHLEEGHHGIRAMGLSPGTVATQMQREIKGSGINPVSQLDWSAH
IPADWPARTLLWMCGAEADPFLGTEISLRDEDIRKRVGLA
>gi|56698264|ref|YP_168637.1| hypothetical protein SPO3441 [Ruegeria pomeroyi DSS-3]
MPVFLRRTSGAVLVYAISTQIAWADLTADQVWADWNAYLGGMGYDVAGTESRSGDTLTIADFAMSMNMPE
QDSAMSFSMPQITLTDQGDGTVRIGLPEEFPLSFTMSVEDEAPVTGTVTYANRNMSMVASGDPDNITYDY
NADQISVRLASLMADGEAMPADAISFLMEMTSVSGTSQMSLGEMRDLVQSFTAAGLTYALSFDDPDSDDA
GNFSGTLSDVSYSGSGSLPTSFDATNFSDMLKSGFAFDALMSYGAGSGNVAAKGDGEEFAWTSSSQGGDF
RIAMDAGHVVYDLKGRQSQISMTTQDLPFPIDLAMAESGFKLDIPTQAGDDPQPFSFGMNLTDFTMSDMI
WGMFDPAGALPRDPATVVLDLSGLATVLVDFLDPTVAETLEATGGAPGELNELTINQLLVSLVGAKLTGT
GAFTFDNSDYESFGGMPAPSGVANLTLTGANALLDKLIAMGFVSEDDAMGARMMMGMLAVPGDAPDTLNS
KIEINEQGHVLANGQRIK
>gi|56698265|ref|YP_168638.1| hypothetical protein SPO3442 [Ruegeria pomeroyi DSS-3]
MGLAAGGGGGYLPDNSKGQPMPHKAEDLSHALLHAARQAGAEAADALVVQGTSVSVEVRGGALEHAERSE
GTDLGLRVFVGKRQAIVSSSDSRPEALAAMAERAVAMAREAPEDPYAGLAEPDQLARGWDLAALNLRDPA
AEPDPQALMQDALAAETAAAAVSGVTQVSDAAAAYGQHHVHLAATNGFSGGYGRSVRSLSCVAISGSGTG
MERDADGDSRTYQSDLRSPEEIGRSAGERAVALQGARKPATGSYPVLFDERISASLIGHLLAAANGASVA
RGSSWLKDNLGEQVLPAALSLIEDPHRPRVSGSRPFDAEGLPTQARAIVEDGVLTGWTLDLASARKLGLA
STGNATRGVSGPPSPSNWNLTLTPGTASRDDLIRDMGTGLLVTSLIGSTINPNTGDYSRGASGFWVEKGQ
IAYPVNECTIAGNLRDMLLGMIPANDARPWLTRVVPSILIEGMTLAGN
>gi|56698266|ref|YP_168639.1| inositol monophosphatase family protein [Ruegeria pomeroyi DSS-3]
MPETDVDLLIRAAREAGQIATRYSGRDARRWDKPDGAGPVTEADLAVNAMLAQMLPAARPGYGWLSEETE
DTAARLDHDRVFIIDPIDGTRSFAEGSRTWAHALAVADRGVVTAAAVYLPQRDLLFSASAGGGAFLNGAP
IRVSAPAHLAQAHILAARPNLQPEHWTGGQVPAFHRDYRPSLAYRLALVAQGRFDGMLTLRPSWEWDIAA
GELILREAGGLCTDRSGAALRFNNPKPRLDGVIAGGHTVHRGLFGALDPASAGIAAH
>gi|56698267|ref|YP_168640.1| 3-deoxy-D-manno-octulosonic-acid transferase, putative [Ruegeria pomeroyi DSS-3]
MARSLSLAAYRVLSWRGVHPPGKDMPARPKGELVWIHVNNRGRFPALCDLSERLVAQRPDLSLLFTIPAD
TRVDDWMAPCGLVSVLPEDHPGPARRFLDHWRPDLCLWSGGALKPNLIDETDSAGIPMLLIDVSERELQA
RRHRWLPDLTRTMLDCFDLILTDGEATARYVRRAGIPPAKVRVSSPLQVSANPPPWPEEELVETNATLGG
RPVWLSAWTQPKEFISVLTAHRHALRLLHRLLLIVHVADPAEAEPLRARLEAMDLRCADWDAGDRIEDST
QVVISAHAEDLGLWYRISPLTFMGSSLEFGTGGRDPLTAVALGSALLYGPNVRAHMETYVRLASAGAARS
VRDAEALGREVVDLLAPDAAARMALAGWQVATETAHLTDSLIEMVQDRLDRRKAVHAST
>gi|56698268|ref|YP_168641.1| tetraacyldisaccharide 4'-kinase [Ruegeria pomeroyi DSS-3]
MRAPEFWQNDPAHPGWQSRLLAPLGALYARATARRLAKGDPVSVPVPVICIGNLNAGGTGKTPSAIWVAE
RLRDAGHEPHVVTRGYGGTLEGPVQVDPRRHRAEQVGDEPLLLAAFAEVWVAKDRAAGTRAAAAAGASVI
ILDDGFQNPSVAKDLSIVVVDAAQGFGNGRCIPAGPLREPVATGLARADLVLALGDAQAQEQFRDTWGAA
LSVPLVTAELKPLRTGMDWAATPVLAFAGIGNPAKFFRTLRAEGADLRRAEALDDHQPLTPALMTRLENE
ARLLGAQLVTTEKDAVRLPPAFRSKVITLPVRLEVAEEDRLRAILLAAAPPPP
>gi|56698269|ref|YP_168642.1| DsbA family thiol:disulfide interchange protein [Ruegeria pomeroyi DSS-3]
MNRLGTLVFAGVAIAAGAYWLTLPSQGNLPANPLVGSAEAQQAEIDTSSIVEMVQGAEDAPVEVIEYASY
TCPHCAAFHEGPYKKLKADFIDTGKVRFIYREVYFDRYGLWASMVARCAGPEKFFGISDLIYKGQAEWSR
AGGPAEIAEELRKIGRLAGIENDKLEACLGDATKAQTLVAWYQEHATRDDINSTPSFMINGKKVENQAYD
GFKALIEAELGN
>gi|56698270|ref|YP_168643.1| hypothetical protein SPO3447 [Ruegeria pomeroyi DSS-3]
MTGRRSSTRGFKRTASVLGDQIRRTGETRGFAVGRVLTHWAEIVGQDLAAIARPVNIGYGKGGFGATLTV
LTTGAQAPMLEMQKEQLRERVNAAYGYNAISRVRITQTAPTGFAEGQATFEHRPKAATSAPRPEIVAEAA
RVADGAKDEDLRAALERLAQNVLSRQKS
>gi|56698271|ref|YP_168644.1| A/G-specific adenine glycosylase [Ruegeria pomeroyi DSS-3]
MRDLQHFDVSGALLDWYDRHAREMPWRVGPTDRAAGVRPDPYRVWLSEVMLQQTTVAAVRDYFHRFTARW
PTVAALAAAPDEAVMGEWAGLGYYARARNLLKCARAVSEEHGGQFPDSYEGLIALPGIGPYTAAAIAAIA
FDRAETVLDGNVERVMARLYDVQEPLPGVKPVLKEHAAALTPTARPGDHAQAVMDLGATICTPRAPACGI
CPLRAPCLARQRGTAPDLPRKSPKKPKPTRHGHVYLAQRADGAWLLERRPDKGLLGGMLGWPGSDWSEAP
APSPPFEAQWRELPAEVRHTFTHFHLILRIHTAQLPETMAPDGLVIVDKHAFRPSDLPTVMRKAFDLWRG
Q
>gi|56698272|ref|YP_168645.1| fatty acid desaturase family protein [Ruegeria pomeroyi DSS-3]
MIPTETLARWQSAAPFWLSFLLIPLVWLVASQGGWWLLAVPLSTWWAFAIYDQVTGLNEENADPQTGDGA
LGWYILLPKLWVPLQFVTLYGLIWYATRADHLSTLEKIALFFGVGVITGTIGINYSHELMHQKNRFERWL
GDILLAMVLYSHFRSEHLLVHHRHVGTPRDPVTARYNEGFHRFYPRVLVQCLRSAFRAEREMLARKDRPW
TDPANPFWRYWALQGGMLALAGLLGGWAGIGLFLVQAGIAIWQLELVNYVEHYGLTRKHLGEGKYEHVMP
RHSWNAAQKASNWLLINLQRHSDHHYKPDRRFPLLQNHTEADAPQLPYGYPVMTVAAMIPPLWRRVMNPR
VRAWRKRYYPEITDWKPYNKALNPAPR
>gi|56698273|ref|YP_168646.1| adenylate/guanylate cyclase [Ruegeria pomeroyi DSS-3]
MTDSTVAPPRRERFFFTQPDEFDFDNRFTQAALTKHKREGLELAVRARWIAMAVIAVLLVFVNPHWDVVY
YHAILALLAVNGWFIRRAGRVGQSRLELLLILIDLLIMTLGMVLPNPLSDDVRPLAMQYRFDNFQYFFVI
LAAGTLAYSWRTVITIGTWTAMLWTLGWVIARWQSEPIAELSARAQAAFAGFPDVAEQLDPNSFMLQLRV
QEVVVFLIVAVTLGVTVRRFNRLLTTNAGLERERANLSRYFSPNVVDALSQNDEPLKQVRQEDIAVLFID
IIGFTRFAAGRDPYEVIEVLRGFHARMEGEVFRHHGTLDKYLGDGLMATFGTPVAGQSDGSNALACARAM
AKTIGDWNRERRRAGEPEIRAGIGVHYGPAVLGDIGANRLEFAVIGNTVNVAAKLETQTRVYDASIVISD
DLRRKVLAEGGAILTDGFDERRDEAIPGMAAPMTVWVL
>gi|56698274|ref|YP_168647.1| modification methylase [Ruegeria pomeroyi DSS-3]
MTTTKTKGATALPLNTIVSGDCIDVMNAMPEASVDLIFADPPYNLQLKGQLHRPDNSQVDAVDDHWDQFS
SFAAYDQFTRAWLKAARRLLKPNGAIWVIGSYHNIFRVGSALQDAGYWILNDVVWRKSNPMPNFRGKRFT
NAHETMIWASKSEGGKYTFNYEALKALNEGVQMRSDWVMPICTGHERIKDENGDKAHPTQKPEALLHRVL
VSSTNPGDVVLDPFFGTGTTGAVAKMLGREFIGIEREEAYRKVAEKRIAKVRKFDREALEVSASKRAEPR
IPFGQLVERGMLRPGEELYSMNQRHKAKVRADGTLIGQNIKGSIHQVGAHLENAPSCNGWTYWCFKRDGK
TVPIDVLRQQIRAELEN
>gi|56698275|ref|YP_168648.1| ribonuclease HII [Ruegeria pomeroyi DSS-3]
MARNGPPGRGRSSLPFCLSRGVNCGQSRGMTQPDYQLEAALAAQGHIRIAGVDEVGRGPLAGPVVAAAVV
LDPGAIPEGLNDSKKLTAARRERLYDILHANAQVSIAEASVEEIDALNILRASHLAMERAVAALNPAPDF
LLIDGNLIPAGLSCPAEAVIKGDGRSVSIAAASIVAKTWRDRLMVDLAQQHPGYGWERNAGYPTKEHRSA
LQNLGVTPHHRRSFKTVHKILYQE
>gi|56698276|ref|YP_168649.1| hypothetical protein SPO3453 [Ruegeria pomeroyi DSS-3]
MSVLWPASSRAVVMGQTCAHPARTSNIAPLLSDIRPAIALRLLNILGSGRRMQSMRQLSKTLAVLALIAA
PASAGAAECYADYKAKQEQPLRLHYGVMQVSSCSAGQAAPEVAARLQAAGWTLLNVLSVFGPEGLDQRKA
DAGPYFLRF
>gi|56698277|ref|YP_168650.1| hypothetical protein SPO3454 [Ruegeria pomeroyi DSS-3]
MPDPIFSVSDARRSGTRLIGFGIGAIVVILATAATFLLLTLPDANAFNARVERVFIENDLTTQAEIRLLE
ILAQSGTAFADTLSSYRMVIFVLLVFASAMMIAALAFLVMLVLLNRRMAQIERTGIQVTSLLISREENTV
YLNNMEFQLTPAAIETLAVLAEARMDDDVLSGAQIEAVISGRDASDCEEAAGATRIKRLRDTLGNQMISA
LLVKNIAKRGYMLAIEKSVIQMV
>gi|56698278|ref|YP_168651.1| adenylate/guanylate cyclase [Ruegeria pomeroyi DSS-3]
MNVHATPRAQSYEISIEPLEGKVEVYRNDVLLAATTRAKVMYETRLAPTVYIPREDLLVPLGEPSELQTF
CPFKGTASYRDLFIGDERIANAVWSYDTPLPESAGIRGYVGFMPQAHTRIELGDNTLQEAAGGHVSGPLV
DWLLRGAASFRTAEEFTRALAEKMLDHGIAVSRLSVLAWSLHPLIAGKHYIWEKGKAEISTYAPTYEIHD
HPAFTNSPLRHVSNGLGGVRQRLADGPTETEFPIMQELRAQGATDYVAMPMPFSDGRINVLTLSCDHPDG
FTTANLGLIFECSAVIGRFYEVFMQRENAQSLLETYVGKRSGARVLGGEIRRGDGDEIDAAIMFCDLRGS
TRLEEELGRGPYIGTLNRFFETVSEIVHAHDGEVLKFIGDAVLAVFPAGVDAQSAHRQAMASATEIVTAL
GQPSEGALALECSIGLAYGRVTYGNVGSKERLDFTVIGQAANIAARLGDYGKAVGHRIVVSEDIESACSN
CLPLGEVALHNVSHPVTCYAVEVDRAKLPAKQPEC
>gi|56698279|ref|YP_168652.1| flagellar protein, putative [Ruegeria pomeroyi DSS-3]
MSYQPVLISGGIAGWRFLQRTYDAQAQSFSNSTVRNRESSYFMEKIGQVKTAEDLVSDRRLLQVALGAFG
LEDDLNNTYFVRKILEDGTTSSDALANKLSDKRYREFSKAFGLGPGEIRTTGLVTFMEDIVAKNEAAGFE
QAVGAQDETMRIALYAQHELKALADDRSSDNAKWFSLMGIPPLRKMMETALGLPSGLGSVDIDKQLEIFQ
DKLQRLTGSPQVSQFTDPEMVEKVTIAYLARSQINSQFAGSSAAQNALTLLGNLR
>gi|56698280|ref|YP_168653.1| flagellar biosynthesis repressor FlbT [Ruegeria pomeroyi DSS-3]
MSGLVLKLAPKERVLINGAVIENGDRRGRLSIMTPDANILRLRDAIHPEEATTPVRRVCYAAQLVLSGDS
DPDQAKMSLLRRIEELSQVFTDPDSRKALAQATEALVADHPYKCLKALRTLLPREERILALRPQ
>gi|56698281|ref|YP_168654.1| flagellar biosynthesis regulatory protein FlaF [Ruegeria pomeroyi DSS-3]
MNALLQARQAYSAASAPTRTPRNMEYEVLSRITHRMHSAAKRGRAGFGELVEALHENNRLWGVLAANVAE
GENALPPDLRARLFYLAEFTQVHTSKVLRREASPRPLLEINTAVLRGLRQGGARE
>gi|56698282|ref|YP_168655.1| flagellin protein [Ruegeria pomeroyi DSS-3]
MSSILTNNGAMVALQTLKSVNMNLGQTQNAISTGKNVATAKDNSAVWAISKVMESDVKGFKAIKDSLSLG
ESTVAVARNAAETVTDLLTQMKGKIVAAQEDNVDRNKINADVTALKDQISAVVGAAQFNGLNLVDGTAAS
ASVLSSLDRDNAGNVTASSITVTGQNLSTGGYTAKAVFDATNTDGVSADGQDTFGFSLDANGGTDDNGQI
EFEPQGTAAYAAGDSFTIRLGDTEVNYTVTAEDIASTSQADVIAVGMKAAIEASGANVTVDYNAANSGRL
VITNDGTDSLQVSGQFSNANSGGLGALAAIDVSNSAGAAAALGSIETLIDTSIDAAAAFGSVQGRIETQK
TFISNLTDSLKSGIGSMVDADMEEVSARLQALQVQQQLAVQSLSIANQAPQSILSLFR
>gi|56698283|ref|YP_168656.1| hypothetical protein SPO3460 [Ruegeria pomeroyi DSS-3]
MDNEDLDDLITSLDELLELERGALVRGELDQLGRMTDEKERLVERINAAPELRRDQLSPLHQKVTRNQAL
LNSALEGIRAVANRMSELRRVRQGLETYDSAGQKHRFATPAKTRLEKRA
>gi|56698284|ref|YP_168657.1| flagellar protein FlgJ, putative [Ruegeria pomeroyi DSS-3]
MDISTTVPIEPRSGKATSPDSALRAVAVELEATFLAEMLKASGLGKARDAFGGGAGEEQFSSFLVRQQAD
QLAKSGGIGLAESLFNALKESQNGQ
>gi|56698285|ref|YP_168658.1| flagellar hook-length control protein [Ruegeria pomeroyi DSS-3]
MVRLATKEIRMTGLTSSNILPLAGQTAKPGAPAPQADPRSGRTHGDFAAVFQEGITAAPPQENAVTKESD
TAVAEEETLTGEQTESLKDGAKVKDRGAPMALAPQQEPPRASRSQSSDRKENAHRGDTRSAERLNTAPNV
ADQAAQTRQTERPRSTRVSNENSVSTTLVRPDQPGHSAARRELPADPWLRFRFSSVSEAAPQERVVSKVY
DRSEKPHPAGTPQELPVGDGQMRLAPSQAQGAGPSTAPGTIHFAAPQSKNAPADSDRERMHEGGETARKI
SIQTRDPSQFNPVPTAEEISLAVATSSEAVANASARSESASASPAAKGMARAYPGESELTGPLANQRSQP
GRRDHAAEAVPVGPARSTSQEQRISSLPPQRGQSRPPRAGHTDSAPMAPAATGAASPATPDRKTEPLGEM
LPVQAKVRDGAPRLQQEQAIGGKEARQPIRVFAQSKGAPDQRMTQFQAAPTPVAVGISDRLVPAQSAASQ
TGAPVAQPASGGVDEREMPRPSAQDDIQTRPLVIAERKAGAPNTNPDQLPTTPESSGPKDRTVRVSDTAL
SPREPAPPLRETALQPREVAPLLRVAAPLPHEVAPPLREAETPPREAISPRGEAPMPLREVASPPLQPGV
RTSQAAQPAVFGTVAPHQASVVQVGVRSGPAMEHRPDQPLDIALAAPTTSGISPAAAPPATPAEAARQIA
GQLATAVTNQPDSGSIEIALDPEELGRVQMNLKTRGDILTLTIATDRPETLDLMRRHIDQLATEFREMGY
KDIAFNFGGSQTDARGGGHGQPGDDAHAGQPLDIEHTGTTPDRPRISAGGLDMRL
>gi|56698286|ref|YP_168659.1| flagellar basal body rod modification protein [Ruegeria pomeroyi DSS-3]
MVETVHSTRPGATSQAPQTTTPEKRSLSSDFDTFIRMLTTQAKYQNPLEPLDSSEYAAQLAQFSMVEQQT
KTNDTLTALVEKLGATDMAKLSNWIGKEVRAVAPANFDGTPVTISPAPLAAADKAFLVVRDAKGETVERY
QVPVSADPISWSGLNDDGEPRDNGLYSFAVQSYKADELLLEEAAAVYHPVSEAQIENGEVILILEGGQAI
LANMVTGVRANG
>gi|56698287|ref|YP_168660.1| hypothetical protein SPO3464 [Ruegeria pomeroyi DSS-3]
MEQTEHIPPPGLVAQLRERSLLQTGDRFETLYGGRTNRVWRLHGPADDLVVKLYRRDFDNPLFGNDAQLE
ALCLDRLEGTGLAPQLRASGALGQEAWVVYDHAPGAPWRTDPAIAARMLANLHRRALDIPAPAGCNGSAA
IRTHAEAILSRCDQPDRELLLKARPHTATIAPGPACLIHGDPVAGNLLVSGDQAILIDWQCPAIGDPAED
LAMFLSPAMQQVYRGAPLTAAEEQQFLSAYDNAGTVARYLSLKPWFHWRMAAYCRWRARNGAPDYAPAFE
LEHAALAAC
>gi|56698288|ref|YP_168661.1| hypothetical protein SPO3465 [Ruegeria pomeroyi DSS-3]
MRRIFSDYAYGNGPRAGCWWDETIAAPDWPVAAGDIRADVAIVGGGFTGMSAALHLAENGVSVAVFEAEA
PGWGASGRNGGFCCLGGSKLSDAQKRRRYGAEGTRAFDEAEKEAVQLAASLIERYGIVADTHSRGETQLA
HNARAMDALRRQADAGHGRLHEKHDLASEGLNGEFHGGLTSDVGFALNPRKYLFGLAAAATGSGARMFRN
SPVIRIEQGARGHVLDTPLARVEADTVLICTNGYSSEDMPPWLAGRYMPAQSSVMVTRPLTEAELQAQGW
TSDQMAYDTRNLLHYFRLMPDRRFLFGMRGGLLSSPRSEAGIRVRLRRHFDTMFPAWTGVEATNLWSGMV
CLSRALMPYVGPVPGSPGLFAGLAYHGNGVAMGTYSGRALARLALGADPGLPQAMQAPLTRFPLGRFRRA
IMPPVYLVLGLGDL
>gi|56698289|ref|YP_168662.1| putrescine ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MNRMSWFNTVSLTLGFAFLYIPMLILIVYSFNESKLVTVWAGFSTKWYGELFQNDAFLNAAWVTLKVAVM
SSTLATILGTMAALVLVRAGRFMGRTLFSGMIYAPLVMPEVITGLSLLLLFIGIGLDRGVMTIVLAHTTF
AMCYVSVVVSSRLVTFDRSLEEAALDLGCSAAEAFRLVTLPIIAPAVISGWLLAFTLSLDDLVIASFTSG
PAATTLPIKIFSAVRLGVSPEINALSTIMIGIVTVGVISASLISKQALVRQKRDEQAAARG
>gi|56698290|ref|YP_168663.1| putrescine ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MDSHGGCAAGKLMRRFLLIAIPYAWLLVLFLVPFVIVLKISLSDAAIARPPYFPQFDWAEGVMAFVRELD
FENFIFLTQDDLYWKAYLSSLRIATTATLLTLVAGYPIAYAMARAPEEWRPTLMMLVILPFWTSFLIRVY
AWMGILSNEGYLNQILLWTGIINEPLTILNTNTAVYIGIVYTYLPFMILPVYSALDRMDGSLIEAAEDLG
CSRAQAFWLVTIPLSRPGIIAGCFLVFIPVLGEFVIPSLLGGSGTLMIGKVLWEEFFSNRDWPVASAVAV
VLLLILVVPIVLFQRNQQKQAEAEK
>gi|56698291|ref|YP_168664.1| putrescine ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MQSSTFAPWEDPNAKPLIRFKNVTKRFGEFTAIDNLTLDIFEREFFALLGPSGCGKTTMMRMLAGFETAT
EGVIELAGQDIAPVPPNKRAVNMMFQSYALFPHLSVWDNIAFGLRRDRKSKAEIEARVEEMLRLVRLEKF
AQRKPHQISGGQRQRVALARSLAKAPKLLLLDEPLGALDKKLRQDTQFELMDIQEKTGTTFVIVTHDQEE
AMTVASRVAVMDQGQLMQVATPDRIYETPNSVYVADFIGDVNIIEGRATPEGEDGYRIDWAEGQPALTAK
SATRFDKGQKCHLAIRPEKVAISAERPADAANAVQGRVHDIAYLGNLSTYYVELADGTIIKAQTSNTRRI
SRRSFTWEDTVWLSWTATAGVLLAN
>gi|56698292|ref|YP_168665.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Ruegeria pomeroyi DSS-3]
MTFKSLTLTAVVALASSTAFAEEVRVYNWSDYIDEELLAKFEAETGITLIYDVFDSNEVLETKMLAGGSG
YDVVVPTGTFLQRQIQAGAFQKLDLSKLPNHANMWDQIESRTAQYDPGNEYSINYMWGTTGLGVNVGKVR
EVLGEDAPMNSMDLVFNPENMEKLASCGVHFLDAPTELIPATLKYLGENPDSHDADVIAKAEPVLMAVRP
YIQKFHSSEYINALANGDICVAIGWSGDILQARDRAAEADNGVEIEYHAFKQGSLMWFDQMAIPVDAPNP
DAAHVFLNFIMDAQNMAAASNYVYYANGNKASQEHLVEDVIGDTAIYPDAETMDNLYTTTPYPAKIQRTV
TRLWTKVKSGT
>gi|56698293|ref|YP_168666.1| GntR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MIKKGASVSAQSEAKQPVHEQVYQMLRARILFGELAPGQAVTIQGLTDSLGVGMTPVREAIRRLMSEGAL
SFQGNRRVSVPVLTQNDLQQVIFVRKSIEAELARRAAERMTPKAVAQLVTLDEALDMAIDSGDVGGYLRS
NYDFHALLYQVADAPILTEMAERLWLRFGPSLRVVCGRFGTQNLPDRHKEMLDALRAGDVDGVARAMEQD
VEQGMEQMAGVLAENA
>gi|56698294|ref|YP_168667.1| putative aminotransferase [Ruegeria pomeroyi DSS-3]
MATITNHMPTAELQALDAAHHLHPFSANNALGEEGTRVITRARGVWLNDSEGEEILDAMAGLWCVNIGYG
RDELAEVAARQMRELPYYNTFFKTTHVPAIALAQKLAELAPGDLNHVFFAGGGSEANDTNIRMVRTYWQN
KGQPEKTVIISRKNAYHGSTVASSALGGMAGMHAQSGLIPDVHHINQPNWWAEGGDMDPEEFGLARAREL
EEAILELGENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGRTGNWFGTQTMG
IRPHIMTIAKGLSSGYAPIGGSIVCDEVAHVIGKDEFNHGYTYSGHPVAAAVALENLRILEEENILDHVR
NVAAPYLKEKWEALTDHPLVGEAKIVGMMASIALTPNKASRAKFASEPGTIGYICRERCFANNLIMRHVG
DRMIISPPLVITPAEIDEMFVRIRKSLDEAQAEIEKQGLMKSAA
>gi|56698295|ref|YP_168668.1| polyamine ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MYGELALTTRTSSDTFVEFERVQKSYDGETLVVKDLNLTMPKGEFLTMLGPSGSGKTTCLMMLAGFETAT
HGEIKLDGRPINNIPPHKRGIGMVFQNYALFPHMTIAENLSFPLEVRKIGKSDREAKIKRALDMVEMGAF
GGRRPAQLSGGQQQRVALARALVFEPELVLMDEPLGALDKQLREKMQFEITRLAHELGITVVYVTHDQTE
ALTMSDRVAVFNDGVIQQLAPPDELYEQPANSFVAQFIGENNTLEGEVQEIRDGIAVVRLDDGGLIDCKP
VNVSRPGERTRVSIRPERVEFNKSRLQKGVHTLKAEVMEFIYMGDIFRTRVRVAGNDEFIIKTRNAPDQV
RLEPGAQIEIGWLPEDCRALDA
>gi|56698296|ref|YP_168669.1| polyamine ABC trasnporter, periplasmic polyamine-binding protein [Ruegeria pomeroyi DSS-3]
MKLKTALLATALTSAAFAVSAQEVTVMSWGGAYTKSQVEAYHKPFTAETGIKVNSVDADNPATPIKAQVE
AGNVSIDVADVEFSDAVRLCDEGLLEEIDPAILSAAPDGTAATDDFIDGALQDCAVANIVWSTSVAYNTA
NVSMAPSSIADFFDTGKIPGKRGLRKSAKATLEMALMGDGVPANEVYDVLDTDEGVDRAFAVLDRIKSDI
VWWEAGAQPPQLLADGEVVMSTAYNGRIFNAAVAEGQPFEIMWDGQILDFDLFVVPKGAPNKDAAMQFIA
FSTSTQALADQAKWISYGPARKSSGALVGLYQDGKTEMAPHMPTSEAALKNALVNNFEFWVDKDAELNER
FNAWLAN
>gi|56698297|ref|YP_168670.1| polyamine ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MTDIAQPLTTADGKPLKGALLRAQARARRRAFLLVLPLLAFILITFVFPIGQMLYRSVYNEGFTWHEDVT
SGDRTPLMTNLADWFDANPPGTVPDEAAFAALAADLVTLRDLKAPGQAGTRINYELSGSRSMFTKAARSA
KKLEPPYKEAILELDKDWGNPELWQAMRGASSSYTTNFYLAAIDRERDASGAVTMVPENRQVYVKLFMRT
LTLSLLITFLTFILAYPIAHLLATLPLRHSNLLMILVLLPFWTSLLVRTTSWMVLLQSQGVLNDTLVGLG
ILGDDGRLQLMYNRAGTVISMTHILLPFMVLPLYSVMRMINPSYVRAARSLGATSWTAFRRIYFPQTVPG
IGAGALLVFILAVGYYITPALVGGADGQLISNLIAFHMQKSLNWSLAAALAALLLAGVLLLYWLYDRLIG
IDNLKLG
>gi|56698298|ref|YP_168671.1| polyamine ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MALPKHASPLERVWHYTYLVICALIFLFLIAPILVIIPLSFNAEPYFTFTEKMLSFDAEGFSTRWYDLLL
TFGMLEPEAPRDGSWWADAWANAQWIQATKNSIIIGFFSTILATTLGTIAALGLSRPEMPGRRAVMAILI
SPMIVPIIITATGLFFFYSSIGIQDWGIPYLGIILAHATLGIPFVIITVTATLVGFDHSLTRAAANMGAD
PVTTFFKVQMPLILPGVISGALFAFVTSFDEVVVVLFVGGLDEQTIPRQMWNGIREQISPAILSVATILV
VISIALLTVVELLRRRSEKLRGLSPG
>gi|56698299|ref|YP_168672.1| hypothetical protein SPO3476 [Ruegeria pomeroyi DSS-3]
MRFLIPFLLLAAPVLADPPAIEKVTAHQSGDGWRFDVTLRHPDTGWDHYADGWRVLDMQGRELGMRTLFH
PHETEQPFTRSLGGVVIPEGTAQVQIEARCNVDGWAPLRLVVDLP
>gi|56698300|ref|YP_168673.1| hypothetical protein SPO3477 [Ruegeria pomeroyi DSS-3]
MTWIDRALAFAPLDYLAVAVLLAGWMWIGWRIENPAPGRPSVSALMADFRRDWMRQMVTRQPRVFDAQLI
SIMRQGTSFFASTAVIAVGGGLALIGNTDRLSDIAQDLAITSAPALVWEVKILIVLLFLSNAFLKFVWAN
RLFGYCAVLMAAVPNEPEDARCLPRAAQAAEICITAARSFNKGLRSTYFALASVAWLIGPLALIGAGVLT
VAVLYRREFASHSRAVLLTLPAEGRLDTAS
>gi|56698301|ref|YP_168674.1| glycolate oxidase, GlcD subunit [Ruegeria pomeroyi DSS-3]
MDMPTPNPTVLAKKPRLVQRLRQVLPDDGVIDDLSETRAYECDALTAYRCPPLLAVLPASTQEVSDVLRI
CHEEGVPVVPRGSGTSLAGGALPTADSVILGVARMNEVLETDYDNRVIRVQSGRTNLSVTGAVEAEDFFY
APDPSSQLACAIAGNIAMNSGGAHCLKYGVTTNNLLGVTMVLMDGTVVEIGGAHLDAGGLDLLGVICGSE
GQLGVVTEATLRILRKPEGARPVLMAFDSNEVAGACVSDIIKAGVLPVAIEFMDRLCIEACEAFAKAGYP
QCEALLIVEVEGSEAEIDDQLTRIIEIARRHNPLELRESQSAEESARIWLGRKSAFGAMGQINDYMCLDG
TIPVSALPMVLRRIGELSQEYGLKVGNVFHAGDGNMHPLILFDANKPGDLEKCEAFGADILKLCVDAGGC
LTGEHGVGIEKRDLMLHQYAAEDLEAQMAVKDVFDPHWLLNPAKVFPLSVSESRRAVQVAAE
>gi|56698302|ref|YP_168675.1| glycolate oxidase, GlcE subunit [Ruegeria pomeroyi DSS-3]
MLRPESEAELAQIVAGLTAPVRIRGGGTRGVPGPKAELDISGLSGITLYEPGALTLVAKAGTPVAEIEAA
LAAEGQRLAFEPVDHRGLMGTGGTPTIGGVVAGNISGPRRIQAGAARDFLLGVRYVDGLGQVISNGGRVM
KNVTGYDLVKLMAGSWGTLGVLSEVSLKVLPKAETQTTLAISVPDAASAVRALSAGLGSPYEVTGAAYDP
ALGQALVRIEGFEASVAYRAEALSRLFAPFGTVARLEDDPWPGIRDVAPFHGREGDVWRISVKPGDAPEL
AARCKAEALLFDWGGGLIWALMPEGADLRGRLGEFAGHATLIRGDRRQHAMFQPESAPLAALTRGLRQRF
DPKGHFNPGLMG
>gi|56698303|ref|YP_168676.1| glycolate oxidase, iron-sulfur subunit [Ruegeria pomeroyi DSS-3]
MQTNFTAEQLTDPGIQRANEILRSCVHCGFCTATCPTYQVLGDELDSPRGRIYLIKDMLENSRIPDAKTV
KHIDRCLSCLACMTTCPSGVHYMHLVDHAREYIEQNYRRPFSDRALRWILSRILPYPTRFRLALLGAKIG
RPFRGLLPDARLRAMLDMAPKHIPPVSRNDDPQSFAPAGARKKRVALMTGCAQKALNTDINDATIRLLTR
LGCEVVVAEGAGCCGALTHHMGRTDESHATAAKNIRAWVREMDGAGLDAIVINTSGCGTTVKDYGHMFRN
EPLADEAARVSSIAMDISELLIKLDLPEGTDKGLTVAYHAACSLQHGQKIKTYPKDLLKRAGFKVVEPAD
SHLCCGSAGTYNLMQPEISGKLKARKIRTLEAKKPDLIAAGNIGCMMQIGSGTELPIMHTVELLDWATGG
PQPPAMTAPGKRAPEVPILR
>gi|56698304|ref|YP_168677.1| hypothetical protein SPO3481 [Ruegeria pomeroyi DSS-3]
MRHVSASIGHAMTLSATRSWLVLAGLALGVTVTNGFARFAYGLLLPAMKSEMQWNYAQAGWLNTANALGY
IAGAVLTMMAIRRVGPVRLFITGLIATTLALLATGANAELWWQTSWRILAGFFGAMSFSTAGTLTAGLFR
NDPRRNALAIAILFGSGGGLGIVLAGAALPLFLEAYGPAAWPLAWYLIGGASLTFLPLALWAAVQQRAPV
QSQAGHAPLPLRRMLPELAGYAGFGLGYIVYLTFLSAWMTEQAASAPFIALVWVILGLCISVSPLVWRPV
LARYASGLPLAMILTGIAVGSALPVVLPNGPALLLSAVVFGLSVFMAPGAVTNFARQNLPPESWGRAISL
FTVVFAVAQTLGPYGAGLVGDLVGDIGISLLVAAGLLLAGAAIASRQKPL
>gi|56698305|ref|YP_168678.1| trypsin domain-containing protein [Ruegeria pomeroyi DSS-3]
MRISAKKPRPRPIFALCAPYPEAQPQEAEVRVRTSILAFVLAAVSTIAGAQDSGLTSLETTDAGRSWLAV
GRLDIDGTGFCTGALIAPDLVLTAAHCLYDKTTGQRIDPARIEFLAGWRRGRASAYRRVARAVHHPDYLY
EGAVTAERVRNDLALLKLSQPIRNTTVVPFETGNRPMRGDAVQVVSYAHDRAEAPSLQEACAVMARQQGV
LVMSCDVDFGASGSPVFSLSDSTPRIVSVVSAKAEVDGARVALGTSLDDTLTFLMGELDSHKRAEIPTVP
RVNRLSASGQGSASGAKFVRP
>gi|56698306|ref|YP_168679.1| hypothetical protein SPO3483 [Ruegeria pomeroyi DSS-3]
MKGLIALALAALLVTPALAQNSGLRRLTDRDDLFGWEAVGRLDIAEQGFCTGTLIAPDLVLTAAHCAFDG
RTGAHYRAGEITFRAGFRDGTSVADRRVVQIVTPSEFRASGAVSAERIRVDVALMRLDDPVPTALADPFA
LHSGDVSGSEISVSSYGRGRAEAISRQRACQMLWRQQGLIAFDCDVTFGSSGAAILAREGSRGRVLSLVS
AGGVVDGRSIGYGMELADTVATLKQKLRANAPAPAANIRRLQVGGSLSSGTSGAKFLRPGGS
>gi|56698307|ref|YP_168680.1| HSP20 family protein [Ruegeria pomeroyi DSS-3]
MRSFDFAPLHRASIGFDQIADLMDRVMSSDVGQPSYPPYNIEKTAADAYRISIAVAGFAETDLSVEVKEN
ALVISARKAADEAERTFLHRGIATRAFERRFTLADHVRVTGASHENGMLHIDLKREIPEALKPRRIEIAS
VKSADTPERIEAKAVN
>gi|56698308|ref|YP_168681.1| hypothetical protein SPO3485 [Ruegeria pomeroyi DSS-3]
MTEICDPKLAEAFAAFPAGPRAGLLKLRALILRSAAELPQAQPLQETLKWGQPAYLAPRGSTLRLGCPRQ
GGFALYVHCQSRLIPDYLEQFEGLDRIEGTRAILFRSADEIDPIRHGWLIRRALTYRVRR
>gi|56698309|ref|YP_168682.1| hypothetical protein SPO3486 [Ruegeria pomeroyi DSS-3]
MLTLITFPKAFGLYSASPFCVKAAYLLTLAGEPWQRQDQTDPRRMPHGKLPVLRTPERLVPDSDGIRAWL
ESRGAEFDRGLTDAQRASARALIHMAEDHFYPYLVLDRWGNDAVWAIIRDTFFGEIPRLLRKPVTNRIRA
QVLRGLDFQGMARFSEAERRDRVERSFEAVTALLWQKPFLFGDAPTGADLSVAPMLAAMRATPVATPLQR
RVAGDRVLSDYIDRMDATLPLT
>gi|56698310|ref|YP_168683.1| hypothetical protein SPO3487 [Ruegeria pomeroyi DSS-3]
MSKTARLFQLMQALRSGPAPHTSTALAQDLGVSPRTIHRDIDALRGLGAVIDGEAGFGFTLIEDATLPPL
GFTDDELEALVLGLREAELIGDPALSQAASAALRKLQGRLPPRQSHRLSHAVLTATRFDRPQPPTIPVAE
LRAAAWDEMAVSFDYTDMHGAATSRTVYPLSIVYMDRSSVLIAWCLLRKDVRVFRLDRMRDLVITGQSFR
PRRVPMLRDALAQIRAQQA
>gi|56698311|ref|YP_168684.1| peptidoglycan binding domain-containing protein [Ruegeria pomeroyi DSS-3]
MIRFLTSLALCLGGSVAAETPATLIPAVAQSLRPVLRPDLLTPVSQDIEAQFQTWLIEFRARALTLGITP
ATLNAALPGLSYDAEVVRRDRNQAEFTKTIWDYLDTAVSEARIANGRKAVARHRDLLARIEARWGVDRHV
VAAIWGLESAYGAVRGGDSTLRSLASLAFDTRRAEFFEGQLIAALRILDSGDARLRDLRGSWAGAMGHTQ
FMPTSYQEHAVDFTGDGRRDIWSDDPSDALASTAAYLKANGWVSGQPWGIEVLLPKGFDLTTARRELTRM
PSDWAAAGVRDLEGRAVPDHGPASILLPAGHSGAAFMIFDNFAVIETYNTADAYVIGVGHLADRIAGGGP
IRGNWPRADRALTLDERIELQERLTAAGFNTQKIDGKIGPLTINAVRDYQLDQGLAPDGYASLRVLERLR
SAS
>gi|56698312|ref|YP_168685.1| phenylalanyl-tRNA synthetase subunit beta [Ruegeria pomeroyi DSS-3]
MKFTLSWLKDHLDTTASVDEIAEALTDLGLEVEGIENPAARLAGFTLAHVKSASQHPDADRLRVCVVETN
EGEKQIVCGAPNAREGITVVLAKPGDYVPGIDVTLSVGNIRGVESHGMMCSERELELSDEHDGIIELPSG
EVGERFIDWLAENDPAKVDPVIEIAITPNRPDALGVAGIARDLAARGIGTLKTRAYAPVPGDFDCPIKVT
IDEDTRDGCPLFTGRLIRDVRNGPSPQWLQDQLRAIGLRPISALVDITNYMTYDHNRPLHVFDADKVKGN
LRVHRAAGGETLKALDEKEYTFQPGMMVISDDEGAESIAGIMGGDATGCTEETVNVFLESAYWDNVQIAL
AGRALKINSDARYRFERGVDPAYTLEGLEHATQMILDICGGEASTVVIAGAVPDHSRAYKLDAERVRSLV
GMDIPESEQRQTLTRLGFRLEGNMAHVPSWRPDVQGEADLVEEVARIASLTKLVGRPLPRLTDGVPKPVM
TPQQRRLSMARRTAASLGYNECVSYTFIDQASAALFGGGTDATMLENPISSEMSHMRPDLLPGLLAAAAR
NQARGFADLALFEAGPVFHGGEPGEQRAQIAGLLVGRTGPKDVHGAARAVDLYDAKADAEAVLAAMGAPA
KVQILRDGDGWWHPGRHGRICLGPKKVLGVFGELHPRVLQAMDVKGPAVAFVLWPEEVPLPRKSGTTRAA
LALRDLQAVERDFAFVVDAGVEALTLVNAAAGADKALIEDVRVFDEFIGGSLGEGKKSLAITVRLQPTET
TLKEKDIEAVSAKIVEKVAKATGGTLRG
>gi|56698313|ref|YP_168686.1| LysR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MSDLTKLDWNHIRAFLKTAETGSLSAAARRLDLTQPTLSRQVAALEQDLGVMLFERIGRTLVLTDAGADL
LEHTRAMGAAADRVALAASGQAQSIEGRVRITASDVMSAYVLPEALRRIRAQAPRLEIEVIAANDIRDLM
RREADIAIRHVRPEQPDLIARLVREATAHFYAASGYLDRRGRPVTKDDLATHDFIAFGDVTEMLGHLTPL
GLPLTRANFRLGSQSGVVAWDYVRQGFGIAPMDDGVAAATPGVERVLPQMEPLLFPVWLTAHRELHTSRR
IRLVFDILAEYLTG
>gi|56698314|ref|YP_168687.1| UbiE/COQ5 family methlytransferase [Ruegeria pomeroyi DSS-3]
MVDSTTFWNKVAEKYARTPIADMTSYDYTLERTAAHLKPGDRVLELGCGTGSTALRLAPDVAAIVATDIA
PAMLAVGRRKAREQGVENVDFVEAPAKTPPEGPFDAALAFNLLHLVDDLDASLAAIHDRLKPGGLFISKT
FCIGTGRNSFKLYAIRLALPVMQLLGKAPPVTFLTEAELDNAITRAGFDLVEQESFPAKDPRRFLVARRR
>gi|56698315|ref|YP_168688.1| hypothetical protein SPO3492 [Ruegeria pomeroyi DSS-3]
MPPAAPHPRLAPKRMKESGMTLNVYLSGEIHTDWREQIVAGAKGLDLAFSGPVTDHAASDDCGVAILGAE
PDKYWHDHKGAMVNAIRTRRGISDADVVVVRFGDKYKQWNAAFDAGYAAALGKSIIVLSPPEHQHALKEV
HAAALAVAETPAQVIAVLRYVLTGALPA
>gi|56698316|ref|YP_168689.1| transporter, putative [Ruegeria pomeroyi DSS-3]
MALHWRILILLFLVRCTMAFQFATIGGIGPVLSDTYTLDIAGLGWIVGLYFLPGVVIALPGGGIARWFGD
ERVILFGLALMTAGSLIMALQPSLSVFSAARLMAGIGGILMNVLMSKLVLDWFANRQIATAMVIFINSWP
AGIGLSLVVQPWLAAQGGVALPFAVETGLIATALVAFFLFYRRPDTAPATSGAPARAMPQGAVLGAVLVA
GFSWGAFNASLAALLSFGPTSLVDRGMSLELAGLSISIVSWTVVVTGTFGGWLTDRTGRPAMVLLTGLSL
FGLALFLFPRVPPMLITMALIGLLSGVPVAGLISLPARVLKPEQRAIGMGLFYTVYYACFAILPGLGGKW
AESAGTVSAAFEFAAFVIVLAILGVFVFLPLSRRV
>gi|56698317|ref|YP_168690.1| glutathione S-transferase family protein [Ruegeria pomeroyi DSS-3]
MFDLAEFPVSQRWPATNPDILQFYSFPTPNGVKVSIMLEEIGLPYEAHRVTLSDADVKSPEFLSLNPNNK
IPAIIDPDGPDGQPLALFESGAILLYLAEKSGKLIGEIAADRARITQWLMFQMGGVGPMFGQLGFFYKFA
GAEIEDPRPRARYVAEVKRLLAVIDAQLEGRDWIAGDYSIADIAIAPWLNTLAFYGAQDLVGWQNHPNAV
AYLERFLARPAVQRGLTIPAREG
>gi|56698318|ref|YP_168691.1| large conductance mechanosensitive channel protein [Ruegeria pomeroyi DSS-3]
MLQEFKTFIAKGNVMDMAVGIIIGAAFTAIVKSLVDDLINPIIGLFTGGVDFTNNFVVLGGDGTAYASLA
AAREAGASVFAYGAFFMAVFNFLIIAWVVFMLVKAVNRAKEAAAKEEAAAEPAAPAGPSELDVLLEIRDS
LKR
>gi|56698319|ref|YP_168692.1| mechanosensitive ion channel family protein [Ruegeria pomeroyi DSS-3]
MQDYLNQAEVIWPLLVSAAKALVVLILGWTLAGTIAGLVRRRINATPQIDPTLGNFTASLVKWAILAMVL
VAVLGIFGIEATSIVAVLGAASLAIGLALQGTLSDLAAGVMLVVFRPYKLGQFVDIGGTSGTVRDLNLFT
TELVTPDNVQIIVPNGQAWGAIITNYSAHDTRRVDLVFGIDYDDDAGKAMEIIERTASADSRVLADPAPW
VRVTNLGDSSVDLTARIWCRAEDYWELKFELTRRVKEAFDAGGISIPYPHSVEIHKEA
>gi|56698320|ref|YP_168693.1| elongation factor Tu [Ruegeria pomeroyi DSS-3]
MAKEKFERSKPHVNIGTIGHVDHGKTTLTAAITKYFGDFKAYDQIDGAPEEKARGITISTAHVEYETDSR
HYAHVDCPGHADYVKNMITGAAQMDGAILVVNAADGPMPQTREHILLGRQVGIPFMVVYMNKVDQVDDEE
LLELVEMEIRELLSSYDYPGDDIPIIRGSALHAMNGTEPSMGEESIRALMAAVDEYIPTPARAVDQPFLM
PIEDVFSISGRGTVVTGRVERGVINVGDSIEIVGIRDTKTTTCTGVEMFRKLLDRGEAGDNIGALLRGID
REGVERGQVLCKPGSVTPHTKFEAEAYILTKEEGGRHTPFFANYRPQFYFRTTDVTGTVTLAEGTEMVMP
GDNVGFTVELIAPIAMEDGLRFAIREGGRTVGAGVVSKIIE
>gi|56698321|ref|YP_168694.1| elongation factor G [Ruegeria pomeroyi DSS-3]
MAREYPLNLYRNFGIMAHIDAGKTTCSERILYYTGKSHNIGEVHDGAATMDWMEQEQERGITITSAATTT
FWERTEDGATADTPKHRLNIIDTPGHVDFTIEVERSLAVLDGAVCVLDANAGVEPQTETVWRQADRYKVP
RMVFVNKMDKIGADFFNCVRMIEDRTGARAVPVGIPIGAETELEGLVDLVTMEEWLWQGEDLGASWVKAP
IRDSLKDMAEEWRGKMIEAAVEEDDDAMMEYLEGNEPDVPTLRKLLRKGTLALHFVPVLGGSAFKNKGVQ
PLLNAVIDYLPSPLDVVDYMGFKPGDEEEVRNIARRADDNMAFSGLAFKIMNDPFVGSLTFTRVYSGVLK
KGDTMLNSTKGKKERVGRMMMMHSNNREEIDEAFAGDIIALAGLKDTTTGDTLCDAKDPVVLETMTFPDP
VIEIAVEPKTKGDQEKMSQGLARLAAEDPSFRVETDIESGQTIMKGMGELHLDILVDRLKREFKVEANIG
APQVAYRETISKEVEHTYTHKKQSGGSGQFAEVKLVITPTEPGEGYSFESRIVGGAVPKEYIPGVEKGIK
SVMDSGPLAGFPVIDFKVALIDGKFHDVDSSVLAFEIAARMGMREGMKKAGAKLLEPIMKVEVITPEEYT
GGIIGDLTSRRGQVSGQESRGNAIAINAFVPLANMFGYINTLRSMSSGRAQFTMLFDHYDPVPQNISDEI
QAKYA
>gi|56698322|ref|YP_168695.1| 30S ribosomal protein S7 [Ruegeria pomeroyi DSS-3]
MSRRHAAEKREVLPDAKFGDKVLTKFMNNLMIDGKKSVAERIVYNAFDRVENKIKRAPVEVFHEALDNIK
PSVEVRSRRVGGATYQVPVEVRPERREALAIRWLIAAARNRNENTMEERLAGELLDAVQSRGTAVKKRED
THKMAEANKAFSHYRW
>gi|56698323|ref|YP_168696.1| 30S ribosomal protein S12 [Ruegeria pomeroyi DSS-3]
MPTIQQLIRKPRQPKVKRSKSQHLEQCPQKRGVCTRVYTTTPKKPNSAMRKVAKVRLTNGYEVISYIPGE
SHNLQEHSVVLIRGGRVKDLPGVRYHILRGVLDTQGVKDRKQRRSKYGAKRPK
>gi|56698324|ref|YP_168697.1| hypothetical protein SPO3502 [Ruegeria pomeroyi DSS-3]
MDSRDMQAIGLCRFSYPAIGGFQVEHETIEERISYLYAEDRLEERFQLLETVALPCLREQTDQNFELIVV
IGDTLPKRHGDRLHDLTSDMPQVRIVVEPPRPQRELMKELLNSARTDPSKPCLQFRYDDDDAVSVDFIER
FRNALNDCRGLVTTNRTVAVDFNRGYVAELGADGIAATETVRTLYVASLGMYVKGGCRLTIMNFAHEKIG
RFMPVISISDVPMWVRSHNGFNDSRQKKVKPVPVVPLTEDQKAEFAARFAIREDHVKRVFSGG
>gi|56698325|ref|YP_168698.1| hypothetical protein SPO3503 [Ruegeria pomeroyi DSS-3]
MQVLGLCRFSYLGLGGFKVMHETLEERRAYLYAPARMEDRFRQFEAVTLPSVTGQTDPDFEFLVVIGECF
PDSYRARLEDLVRGVPQVRIRAYPPLRHRTAMAQALDDHRRDMDAPCLQFRLDDDDGMARDFVARYREVA
ADTEALWRKHPAVAVDFNTGYVFRCGKRGIEISPFQFAYSAIALGVIVAPGHREGIMHFGHHKLWTVMPT
ITVPGEDMMLRGHNEFNDSRAKPGAKQFSYQPLDADEEAYFKARFNVDNARVREIFSAPMP
>gi|56698326|ref|YP_168699.1| hypothetical protein SPO3504 [Ruegeria pomeroyi DSS-3]
MLGSQCAASEPVPAHSLWRGQDMSPNMRGALLMTGSMAAFTCNDTVVKLLGSEMPLFQILVLRSGLSAVW
IYFLARRLGALHLRFGRRDRMLVALRCLSEIGATYFFLTALLNMPLANVTAVLQMLPLTVTLGAALFFGE
QVGWRRMLAIGLGFCGMLLIVRPGPDGFTLHAIYAMAAVICVTARDLVTRRMSSHVPSLTVTLATALSVM
SFGLVGSLTVDWVPLTTDLGLGLLAASLLVLGGYLFSVMVMRIGEVGFVAPFRYSSLLWALVLGWLVFGD
WPDPLTMAGVALVVATGLFTLFRERASRHRG
>gi|56698327|ref|YP_168700.1| hypothetical protein SPO3505 [Ruegeria pomeroyi DSS-3]
MARAAGAGYRGIMRLKSNLPPLPLILLLWLAGLGAAGQFAKIAVPFDMVRQLYPDAGAGQGWLLSVISVF
GILFGMMAGVLVGRYGSRRLLVAGLALGALMSFWQSAQPGFGAMLASRMIEGLSHLAIVVAAPTLIAQIA
PDPLRNFAMTLWSTFFGVAFALVAWIGLPWAQVHGVTGLFLFHGATMAALAVAVWFLLPADTVAAGGETS
LRPHALLARHLSAYGSPRIAAPAAGWLFYTLTFVSLVAILPPLLPMHLQATIVGVMPLTSIAVALLVVTP
LLRRWPAPGVVMAGFGLSALVLSGFWLGVPTPVLCVLLFATLGLVQGASFAAIPALNASAQDRALANGAL
AQMGNLGNTLGTPVLLLVLAGWGTGGLLAVVILIYLAGIALHLWLWRRRLRE
>gi|56698328|ref|YP_168701.1| DNA-binding protein, putative [Ruegeria pomeroyi DSS-3]
MLDSRPRELPGFGPRLRRLRRARLMKQSTLAEALDTSQATVSRWEAGAQLPDPKTRHRALDLLTRNVCDD
AVLRRLVEHSRDCVHLVDEANHVCLAYSPARARQWGQSQRALLGQSLWPFATVEIQAAEAALDGSDWWDS
QVPRPRLFHTSRRVYDALTVVEGGLLWERLYLADGTPVRLCSHAPSPHN
>gi|56698329|ref|YP_168702.1| DNA-directed RNA polymerase subunit beta' [Ruegeria pomeroyi DSS-3]
MNQELTNNPFNPLTPPKVFDEIKVSLASPERILSWSYGEIKKPETINYRTFKPERDGLFCARIFGPIKDY
ECLCGKYKRMKYRGVVCEKCGVEVTLQKVRRERMGHIELAAPVAHIWFLKSLPSRIGLMLDMTLRDLERI
LYFENYVVTEPGLTDLTYGQLMTEEEFMDAQDQYGMDAFTANIGAEAIREMLSQIDLEAEAEQLRADLAE
ATGELKPKKIIKRLKVVESFLESGNRPEWMVLTVIPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNN
RLKRLIELRAPDIIVRNEKRMLQESVDALFDNGRRGRVITGANKRPLKSLSDMLKGKQGRFRQNLLGKRV
DFSGRSVIVTGPELKLHQCGLPKKMALELFKPFIYSRLEAKGLSSTVKQAKKLVEKERPEVWDILDEVIR
EHPVLLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCSAFNADFDGDQMAVHVPLSLEAQLEARVLMMST
NNVLSPANGAPIIVPSQDMILGLYYLTLEREGMVGEGKIFGSIDEVQHALDAGEVHLHTKITARIAQIDD
EGNEVLKRVETTPGRVRLGALLPMNNKAPFELVNRLLRKKEVQQVIDTVYRYCGQKESVIFCDQIMTMGF
REAFKAGISFGKDDMVIPDDKWGIVDETRDQVKDFEQQYMDGLITQGEKYNKVVDAWSKCNDRVTEAMMS
TISADKRDENGAVMEPNSVYMMAHSGARGSVTQMKQLGGMRGLMAKPNGDIIETPIISNFKEGLTVLEYF
NSTHGARKGLSDTALKTANSGYLTRRLVDVAQDCIVREHDCGTDRGVTAEAAVNDGEVVASLAERVLGRV
AADDILRPGTEEVLVAAGQLIDERMADAIHEAGVQTSRVRSPLTCESEEGVCAMCYGRDLARGTMVNQGE
AVGIIAAQSIGEPGTQLTMRTFHIGGVAQGGQQSFQEANQDGTITFENPQLLLNASGESLVMGRNMKLLI
KDAQGEERASFKLGYGSKLFVKDGAQIKRGDKLFEWDPYTLPIIAEKAGTAKYVDLVSGIAVRDETDEAT
GMTQKIVIDWRAAPKGSDLKPEIILVDSDGEPVRNDAGNPVHYPMSVDAILSIEDGQVIEAGDVIARIPR
EGAKTKDITGGLPRVAELFEARRPKDHAIIAEIDGYVRFGRDYKNKRRISIEPSNEAMEPVEYMVPKGKH
IPVQEGDFVQKGDYIMDGNPAPHDILSILGVEALANYMVKEVQEVYRLQGVKINDKHIEVIVRQMLQKWE
ISDSGDTTLLKGEHVDKQEFDAANEKTIARGGRPASGEPILLGITKASLQTRSFISAASFQETTRVLTEA
SVQGKKDKLVGLKENVIVGRLIPAGTGGATQQMRHIATQRDNVVIAARREEAEAAAALAAPIMDADIVDD
DFDTLVDTPESRD
>gi|56698330|ref|YP_168703.1| DNA-directed RNA polymerase subunit beta [Ruegeria pomeroyi DSS-3]
MAQTFLGQKRLRKYYGKIREVLEMPNLIEVQKSSYDLFLNSGDAPQPLDGEGIMGVFQSVFPIKDFNETS
VLEFVKYELEKPKYDVEECMQRDMTYSAPLKVTLRLIVFDVDEDTGAKSVKDIKEQDVFMGDMPLMTPNG
TFIVNGTERVIVSQMHRSPGVFFDHDKGKTHSSGKLLFACRIIPYRGSWLDFEFDAKDIVFARIDRRRKL
PVTTLLYALGLDQEGIMDAYFKTVSYRLEKKRGWVTPFFPERVRGTRPTYDLIDAASGEVIAEAGKKVTP
RAVKKLIEEGSVTDLLVPFDHIVGKFAAKDIINEETGAIYVEAGDELTLEYDKDGDLIGGTVKELIDNGV
TNIPVLDIDNINVGPYIRNTMAQDKNMNRETALMDIYRVMRPGEPPTVEAASALFDTLFFDSERYDLSAV
GRVKMNMRLDLDAADTQRTLRREDIIACIKALVELRDGKGDIDDIDHLGNRRVRSVGELMENQYRVGLLR
MERAIKERMSSVEIDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQTNPLSEVTHKRRLSALGPGGLTR
ERAGFEVRDVHPTHYGRMCPIETPEGPNIGLINSLATFARVNKYGFIETPYRVVKGGQVTDEVHYMSATE
EMRHTVAQANATLDENGKFVNELVNTRQAGDYTLAPMESVDLIDVSPKQLVSVAASLIPFLENDDANRAL
MGSNMQRQAVPLLRAEAPLVGTGIEEKVAIDSGAAIQAKRAGIIDQIDAQRIVIRATEDLELGDAGVDIY
RMRKFQRSNQNTCINQRPLVKVGQQVSKGEVIADGPSTDMGELALGKNVVVAFMPWNGYNYEDSILISER
IARDDVFTSIHIEEFEVAARDTKLGPEEITRDIPNVGEEALRNLDEAGIVYIGAEVQPGDILVGKITPKG
ESPMTPEEKLLRAIFGEKASDVRDTSLRVKPGDYGTVVEVRVFNRHGVDKDERALQIEREEVERLARDRD
DELAILDRNIYARLKSLILGKTAVKGPKGIKPGSEITEELLETLTRGQWWMLALEGEQDAQIVEALNEQY
ELQKRALDARFEDKVEKVRRGDDLPPGVMKMVKVFIAVKRKLQPGDKMAGRHGNKGVISKVVPMEDMPFL
ADGTPVDFCLNPLGVPSRMNVGQILETHMGWAARGLGLNVDEALQEYRRSGDLTPVRDAMKHAYGEDVYA
EGISGMDEDTLVEAAGNVTRGVPIATPVFDGAKEADVNDALTRAGFDTSGQSVLFDGRTGEQFARPVTVG
IKYLLKLHHLVDDKIHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDV
AGRTKVYESIVKGEDNFEAGIPESFNVLVKEVRGLGLNMELLDAEVEE
>gi|56698331|ref|YP_168704.1| 50S ribosomal protein L7/L12 [Ruegeria pomeroyi DSS-3]
MADLKALAESIVGLTLLEAQELKNILKDEYGIEPAAGGAVMVAAAGGDAGAAAEEEKTEFDVVLKNAGAS
KINVIKEVRGITGLGLKEAKDLVEAGGKIKEGVAKAEAEEIKAKLEAAGAEVELA
>gi|161598430|ref|YP_168705.2| 50S ribosomal protein L10 [Ruegeria pomeroyi DSS-3]
MDRAQKEKVVEELGQIFESSGVVVVAHYAGLTVAEMQDLRARAREAGGSVRVAKNRLAKIALEGKPCASM
ADLLTGMTVLTYSEDPVAAAKVAEGFAKDNKKFEILGGAMGENALDRAGVEAVSKMPSREELIAQIVSCI
GAPASNIAGAIGAPASNIAGILSTIIEKAEAA
>gi|56698333|ref|YP_168706.1| hypothetical protein SPO3511 [Ruegeria pomeroyi DSS-3]
MTVPWQVGAILNEPLADTLRFAAWYLEAGAEAVTLLFDNPQDPAIAILDGHPRVTCVPCTPEFWADLGLT
PETRFTKRQNVALTWVYRQQAEGWLLNVDADEFMWAPGDGIGAFLAAQPVEAEAIRVETAEIVAVHDGAA
GPVYRLPMERDAARRVYGESAALFGPRRKGLIGHPQGKSFIRCGLKDVALRQHWAQRQGGAEMAETFVPV
RGGRAALLHHIGLDYDIWRAKLDWRLVSSGFTVPLTERIRALMDEPDAESRLRALHSDLHAVERARLDRL
RAEGACLEPPVDVDGVAARVFGATFAVT
>gi|56698334|ref|YP_168707.1| hypothetical protein SPO3512 [Ruegeria pomeroyi DSS-3]
MQRKRRRPMTEASGFSLLTFVLQPAHCVVLRDWMEFFDQPPDRLVVHVGQNPAIADQLRSLASEFGAELV
IAGQTDPAQTTENETGLLWQQFDLIGDDLACIVRLDTLPYRESNLPWQAEAMEAMARHGAAFLTGSTLPF
RADTTLPETGLMQTQRFSNCFAILPAPVWRKAQQAQQSGADAFGRFGSEAAVELYCAESGAFGLRLPNSP
ELRIFHCQEWGPRMAEVRAAFHAGRGIAPFLRGYQDDFMGARARFYMERRPPLSRRVRILLGRWKRNLLG
QTG
>gi|56698335|ref|YP_168708.1| 50S ribosomal protein L1 [Ruegeria pomeroyi DSS-3]
MAKLGKRTRAAREAFAGKEELSVEQAVALIKSAASAKFDETVEIAMNLGVDPRHADQMVRGVVGLPNGTG
KTVRVAVFARGPKAEEAQAAGADIVGAEDLMETIQSGKIEFDRCIATPDMMPVVGRLGKILGPRNLMPNP
KVGTVTMDVAQAVQNAKGGEVQFKVEKAGVIHAGVGKVSFDEAKLVENVRAFVDAVAKAKPAGAKGTYLK
KIALSSTMGPGVSVDVASASGN
>gi|56698336|ref|YP_168709.1| 50S ribosomal protein L11 [Ruegeria pomeroyi DSS-3]
MAKKLIGTLKLQVPAGKANPSPPVGPALGQRGINIMEFCKAFNAKTADMEVGAPCPTVISYYQDKSFTMD
IKTPPASYFLKKAAKIQSGANKPSRETAGTVTVAQIREIAEAKMKDLNANDIDGAMQIILGSARSMGIEV
K
>gi|56698337|ref|YP_168710.1| hypothetical protein SPO3515 [Ruegeria pomeroyi DSS-3]
MTIYSWNALYLGNAGDIDSYEGDLYAEGASNILGSYGSPGDPLYDHIVDVVVNDADDDTDINSDNYDFWS
PDAMTVDGVAHTLDSGVVYNATLTYADGSTANITAVVIQTTDGDLYLAPEMTANDDWVAMEAKAIVSVSL
DSVSVDTTYIAANRQQTNFICFAAGTRIATPKGARPVETLAVGDLVQTLDHGPQPIRWIGTRRVGLATQL
LSHGVAPVVIPAHSFAPSIPTHPLLLSQQHRVLLRSRIARRMYGSDEILIAARRLTGLHGIALRPATGPV
RYIHFALDRHEIVFANGLPAETLLLGAEVERVLGTDVFTQIEQSQNRGAIALAMRPARPIVEGRRARSFV
ERLRNRACRHALANPIKVPQNRVTGLISLVSPPG
>gi|56698338|ref|YP_168711.1| transcription termination/antitermination factor NusG [Ruegeria pomeroyi DSS-3]
MAKRWYSVSVLSNFEKKVAEQIRASVAENGLEDQIDEVLVPTEEVIEVRRGKKVSTERRFMPGYVLVHME
MSDQGYHLINTINRVTGFLGPQGRPMPMRDAEVNQILNRVQEGEEAPRTLISFEIGERVKVNDGPFEGFD
GMVEGVDDDSQKLRVSVSIFGRETPVELDFTQVAKQG
>gi|56698339|ref|YP_168712.1| preprotein translocase subunit SecE [Ruegeria pomeroyi DSS-3]
MPIVRKQREVRHMATINPIQFIQQVRAEVSKVVWPTRREVLLTTVMVFIMAALTAIFFALVDLSIRGGLQ
LLFGMFN
>gi|56698340|ref|YP_168713.1| hypothetical protein SPO3518 [Ruegeria pomeroyi DSS-3]
MDIYENGSRPTRKANSDWFTGTVWQDPVIEAPAPARVRALRVGFEPGARTAWHTHPLGQTLYVLSGTGLV
GLRDTAPRVIRAGDTVWIPPGEEHWHGAGPETGMVHLAIQEAEDGQVANWLEKVGDSDYLTPPQSAANRP
>gi|56698341|ref|YP_168714.1| cytochrome oxidase maturation protein, cbb3-type [Ruegeria pomeroyi DSS-3]
MEVLAILIPISLILGAVGLLAFVYTVRSDQYDDPEGDARRILSGDWDDKPKP
>gi|56698342|ref|YP_168715.1| copper-translocating P-type ATPase [Ruegeria pomeroyi DSS-3]
MTAQLRPSPAACPACVAVPAQPARPVPEDVQIALSLPGIHCSACISTVERALQAHPGVEDARVNLTLKRA
LIKAAPELRAADLIPVLERAGYEAHELDPGTLNATRTDRAGRDLLMRLAVAGFASMNVMLLSVSVWSGAS
DATRDMFHWISAAIAMPAIAFSGQPFFVRAWGALKARRLNMDVPIVLAIVLALVTSLWETSLSGEHAYFD
AALTLTFFLLAGRYLDYRTRAVARSAAEELAALEVPRAIRLQDGVETEVAVAQLAVGDLILVRPGGRMPV
DGEIVEGRSELDRSLLTGETLPVFAEPGLVVSAGEVNLTGPLVIRANAVGQDTSLHRMADLVAIAESGRS
RYTSLADSAAKLYAPGVHILSALSFVGWYLYSWDVRTALNIAAAVLIITCPCALGLAVPAVTTAASGRLF
KRGMLIKHATALERLAEVDTVVFDKTGTLTAGTPELTNLGDHRRADMEIALALAEASSHPLSVAITRAAR
AAGLHPARIDDVTEVPGFGTEGAWQGQRVRLGRAAWVGAEQAAQTSAWLAVGDRAPVAFLFSDALRPGAE
ETVAGLKAAGKEVLLISGDTTGAVESLARRLGIESWMAEALPQDKADRVQALADAGKRVLMVGDGLNDTA
ALAAAHVSISPASALDAARVASDIVLLGNDLSPIAGACDTAIRATKRIRENFRIATVYNVIAVPLAVAGL
CSPLIAALAMSTSSITVSLNALRLR
>gi|56698343|ref|YP_168716.1| fixH protein, putative [Ruegeria pomeroyi DSS-3]
MAERTFTGKHAAMVFVGAFGIIIGVNILLAYSAIKTFPGLEVKNSYVASQEFDTRRDAQEALGWHVRADA
TGGLVVLSITDRAGKPVEVSELKAVLGRATHVQEDFAPDFAFDGTAYVAKAELGDGNWNIRMVARAEDGT
EFVQRVVLHVKG
>gi|56698344|ref|YP_168717.1| iron-sulfur-binding protein RdxA/RdxB/FixG family [Ruegeria pomeroyi DSS-3]
MSESTPEPSLYAAREPIFPRRVSGTFRNLKWVIMAVTLGIYYLTPWIRWDRGPSLPDQAVLLDMANRRFY
FFWIEIWPHEFYFVAGLLIMAGLGLFLFTSALGRVWCGYACPQTVWTDLFILVERWIEGDRNARLRLHRQ
EKLDFRKARLRITKWAAWLLIGLATGGAWIFYFADAPTLLSDLVTGNAHPIAYTTMAVLTFTTFFFGGFA
REQICIYACPWPRIQAAMMDEDTLVVGYREWRGEPRGKGKRTEDSELGDCIDCMACVNVCPVGIDIRDGQ
QLECITCALCIDACDDMMEKIGKPRGLIDYMALKDEEAERAGHPPKNIWKHILRPRTIMYTSLWSLVGFG
LLFALFIRSDIDLTVAPVRNPTFVTLSDGSIRNTYDVRLRNKHGEERPFQLSVVGDPSMRIELEGLPDEN
VSVPADTAFLQRVYIVTPKDAAPSQAASTDVRIWVEDQSNGERAYKDTTFNGRGN
>gi|56698345|ref|YP_168718.1| cytochrome c oxidase, cbb3-type, subunit III [Ruegeria pomeroyi DSS-3]
MSKKPVQKQEVETTGHSWDGIEEYNNPLPRWWLWTFYLCIIWAIGYTIAYPAWPMINSATAGVMGWSTRA
NVAADIAAVDEANAPINAKLESVELTAIAADADLNSYAVSAGSAVFKTWCAQCHGSGAAGAVGYPNLLDD
DWLWGGSIEDIHQTVTAGIRNTENDDARYSEMPAFGRDELLEAAEIDQVVNYVMSLSGEPQDAAQVAAGA
VVFADNCSSCHAEDATGDRTQGAPNLADAIWLFGGDYAAISDSVNNARFGVMPAWDSRLTEAQIRAVSAY
VHQLGGGE
>gi|56698346|ref|YP_168719.1| cytochrome c oxidase, cbb3-type, subunit IV [Ruegeria pomeroyi DSS-3]
MEEYTLLRQFADSWMLLALFAFFIGVVIWVFRPGSTRTYDDTANIPFRHADAPAPVQGDAAAPLRGDDKP
ATFKEARQ
>gi|56698347|ref|YP_168720.1| cytochrome c oxidase, cbb3-type, subunit II [Ruegeria pomeroyi DSS-3]
MAILDKHKILETNATLLLIFSFLVVTIGGIVQIAPLFWLENTIEKVEGMRPYTPLEMAGREVYIREGCYV
CHSQMIRPMRDEVERYGHYSLAAESMYDHPFQWGSKRTGPDLARVGGRYSDDWHVDHMRDPQSVVPESVM
PKYGYLERTMIDGKYIGDLMAANAIVGVPYTDEMIEAAQADFAAQADPDSDYDGLLERYGDKVNVRNFDG
QPGVSEADALIAYLQMLGTLVDFSTFTPDASR
>gi|56698348|ref|YP_168721.1| cytochrome c oxidase, cbb3-type, subunit I [Ruegeria pomeroyi DSS-3]
MSNYIKLIALGLIALFAAMGINYARDVAYMVHAVIVLLVSGGLFIWTLRKTDEARGLLDLSGEYMDDVVR
YGVIATAFWGVVGFLAGTFIAFQLAFPGLNFEWAQGYANFGRLRPLHTSAVIFAFGGNALIATSFYVVQR
TSAARLWGGNLAWFVFWGYQLFIVLAATGYLLGGTQSKEYAEPEWYVDLWLTVVWVAYLAVFLGTIIKRK
EPHIYVANWFYLSFIVTVAMLHVVNNLTIPVSIWGSKSVIVWPGVQDAMVQWWYGHNAVGFFLTAGFLGM
MYYFIPKQAERPVFSYKLSIIHFWALIFIYIWAGPHHLHYTALPDWASTLGMVFSVVLWMPSWGGMINGL
MTLSGAWDKLRTDPIIRMMVISVGFYGMSTFEGPMMSIRAVNSLSHYTDWTIGHVHSGALGWNGMITFGA
LYFLVPVLWKRDRLYSLKLVNYHFWLATIGIVLYAASMWVTGIMEGLMWREVDANGFLVNSFADTVAAKF
PMYVVRGLGGVLYLTGAIIMCYNLWMTVRKAPAKEASLSVAVPAE
>gi|56698349|ref|YP_168722.1| universal stress protein family protein [Ruegeria pomeroyi DSS-3]
MMAYKSLLTVLTDPKIAPATLAQLVALAEAQDAHAEALCLGVDRSQTGYYYAGANALILQETLNRANAEA
EEVLTLAQDTLGKSGVRWSAESGVAQIADLGRHVAHRARFSDLVVLSRPYGEDRGSEAEPIVEAAMFEGH
APVLVVPDNAPPLKQPRTVLLGWNESVEAMRAIRLAMPFLRAADLVRIVVIDPPRHGPDRSDPGGLLSQM
LARHGVKVEIDVLSKTMTRVSDILNRHATDTSADMLVMGAYGHSRFREAILGGATRNMLEQATVPVFMAH
>gi|56698350|ref|YP_168723.1| hypothetical protein SPO3528 [Ruegeria pomeroyi DSS-3]
MQFDSLLILLLVGALAGWLSGKIMAGRGFGLLGNILVGIVGAFLAGTIFPALGFAVGGGFLASVIHATIG
SVILLFVIGLIRKA
>gi|56698351|ref|YP_168724.1| serine hydroxymethyltransferase [Ruegeria pomeroyi DSS-3]
MPAHCETRVQQIAETTARADSDAIDAHLEALIEENRTIHDAECFNLNPATNVMNPRAEAVLARGLGSRPS
LGYPGDKYEMGLEAIEEIEVIAAELAAKVFNARYAEIRVGSGALANLYGFMALTRPGDTIIAPPASIGGH
VTHHKAGCAGLYGLKTIEAPVDADGYSLDLSALAELAERHRPRLITVGGSLNLFPHPVAAVREIADRVGA
KVLFDAAHQCGIIAGGAWANPLDEGAHLMTMSTYKSLGGPAGGLIVTNEAEIAERLDAIAFPGMTANFDA
AKSAALAISLLDWVDHGAAYAQAMVDLAQALAAELEALGLPVFHGAGGATASHQFAVEAARFGGGQAASK
TLRRAGFLACGIGLPIAPVAGDMNGLRIGTPELVRRGVTPEHAAELAWLITQGLTGNDPEAVALRTREMR
ARFQGMHHIRS
>gi|56698352|ref|YP_168725.1| LysR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MPVAPPRPRPLPLNALRAFEAAARLGGFAAAAEELGVSPGAVSAQIKQLEDVLGAPLFERGVRGVNLTAL
AVDVLPDLTGAFDRLATVSHGLRTGAKPQVVHVAALPSVAQLWLSPRLPGLRAAASEIEISVTAMEQPPD
LKRAPFDLCLFFGESPGEALAADTITPVCAPALADRLHRPEDLRHLPCLIDTTWHADWSHWMATALPGQT
FVPRGPEFSLYALAVEETVNGAGVLMGHEALIAPFLARGQLVAPFATRVTLPRALRLWAPRPLPPGSAAQ
RVADWLRRQS
>gi|56698353|ref|YP_168726.1| transcriptional activator protein FnrL [Ruegeria pomeroyi DSS-3]
MSTQPQLCHTSCDDCPIRHRAVCAHCDADELEKLEEIKYYRSFEAGQTVIWSGDQMSFVGSVVSGIATLT
QTMEDGRTQMVGLLLPSDFVGRPGRDGAPYDVVATTDLVMCCFRKKPFEELMARTPHIAHRLLEMTLDEL
DAAREWMLVLGRKTAREKIASLLSIIARRDASLSMRGVSGPMVFDLPLTREAMADYLGLTLETVSRQISA
LKKDGVIHLEGKRHVTIPDMGRLMEEAGDDTDGGFLV
>gi|56698354|ref|YP_168727.1| coproporphyrinogen III oxidase [Ruegeria pomeroyi DSS-3]
MIAKSQLARLGLFDAKVPRYTSYPTAPHFSNDVGPDRFGDWISGIAPGSAISLYVHVPFCRRLCWFCACR
TQGTQTDNPVIAYVDTLKAELALLAERLPEGVHLSRLHWGGGTPTLLNPELMRGLARSIFDTVPLGPEAE
FSVEIDPNEIDPARLDALAEAGMNRASIGVQDFDDEIQKTIGRIQGYDVTRDAVEMIRARGIYSLNADIL
YGLPHQTRARMTESVQKLLSLNPDRVALYGYAHVPWMAKRQQLIPSDALPTPEQRLDLFDTARRLFMWDN
YAEIGIDHFATQEDGLTRALKTGKLRRNFQGYTDDQAEVLIGVGASSISRFPQGYAQNAPATSAHTAAIR
AGRFSTARGHLFKGQDVMRARLIEALMCDFRIDRAEILRDHEITAEELDQMFRNADEAFDGLLRVTADGL
FIPQEARALTRMVARLFDAYDLSKAGHSSAI
>gi|56698355|ref|YP_168728.1| elongation factor G [Ruegeria pomeroyi DSS-3]
MRCDRIRATPDCAADDRITARKGIASMRVFTVLGPSQSGKSTLVEAISRLDSRPTTFDLSETVHLHGFSY
LEEPWCAIDVDGGSDALAFAGPAMAISDAAVIVVPPDPEAAVLCAPYLRLVEEARIPAFLFINRMDNPNG
RIRDIVAALQAYCSHHIALRQVPIREGDQVVGAVDLISERAWKYREGEPSALIELPAAAVEREQEARAEL
LEALSDFDDHLLEQLIEDRQPPSAEVYDLAARVSQNHQLIPAYLGAANHGNGLTRMMKALRHEAPEFDIA
AGRDAASEQARAIAGFGDMRKHMGKIVVLRGLGDGVKAHEALGGDTVGSLLELDARSQIGALAAGQIGLA
VKSDHLRPGHIYDSAGASDLPDWARSHPPGHRQLVSPAHERDDARLSSALARMNEIDPGLHLGVDEGTGH
AVLGCQGPQHLRRIATKLAEDFGVEITSEPVATAYRETIQKPVEHHHRHRKQSGGAGQFADVLLTVEPLP
RGAGFQFDEVVKGGAVPKTYIPSVAQGAEEALARGPEGFPVVDVKVTLKDGKHHAVDSSDYAFRTAGKAA
VREALPQAKPVVLQPIMRAEIHLPSMFVGDLVPAISGLQGQVLGFEAHPSAAGWEIFNALLPAVAEDELH
RMLASSSRGTGWVRLSFDHYEELRGPVPKPSRETAAAG
>gi|56698356|ref|YP_168729.1| oligopeptide/dipeptide ABC transporter ATP-binding protein [Ruegeria pomeroyi DSS-3]
MSALLEVKGLNVSFRQDGRISQAVRGVSFTVNRGETVALVGESGSGKSVSALSTVSLLGDSAIVEGSVTY
DGQEMIGASEQRLMDVRGNDISFIFQEPMTSLNPLHTIRKQMAESLALHQGLVGAAALERILELLVKVGI
RDPETRLDAYPHQLSGGQRQRVMIAMALANKPDILIADEPTTALDVTIQAQILELLADLQREENMGMLFI
THDLGIVRRIADRVCVMKAGEIVESGSTEEIFANPRHPYTRKLLAAEPKGRPDPVPAGAEEVARTDHLRV
WFPIQRGFLRRTVGHVKAVNDASISVRAGETLGIVGESGSGKTTLALAIMRLIGSEGGITFRGEDVRSWS
TRELRRLRKDMQIVFQDPFGSLSPRMTCAQIISEGLAIHKVDPHRAPRELVAEVMQEVGLDPATMDRYPH
EFSGGQRQRIAIARAMVLRPRLLVLDEPTSALDMTVQVQIVALLRDLQRKYGLAYLFISHDLKVVRAMSH
KVIVMRQGDVIEMGETEALFTNAQTDYTRSLIAAAG
>gi|56698357|ref|YP_168730.1| oligopeptide/dipeptide ABC transporter permease protein [Ruegeria pomeroyi DSS-3]
MRLSPLNQRRWNNFRRNRRAFWSLILFSILFGVSLFAEFLANDKPILVSYRGELRMPIFSFYPETAFGGD
FRTEAIYRDPEVKCLIASGGVEDCFDDPEGVIEQIEAGTYQADGFEQGWAIWPPIPYSYRTSVDRPGAAP
LPPNEQNLLGTDDTKRDVLARVIYGFRLSILFALIVTFAASIIGVIAGAIQGFFGGRTDLIMQRVIEIWG
ATPGLYVIIIMFSIFQRSFWMLVIISILFGWTALVGVVRAEFLRARNLEYVRAARALGVSDWTIMFRHML
PNAMVATVTILPFLVTGSIGGLASLDFLGFGLPSSAPSLGELTLQAKQNLQAPWLAFTAFFTFAIMLSLL
VFIFEGVRDAFDPRKTFS
>gi|56698358|ref|YP_168731.1| oligopeptide/dipeptide ABC transporter permease protein [Ruegeria pomeroyi DSS-3]
MGAYILRRLLLVIPTLLGIMLVNFVLVQFVPGGPVDQAIAQLQGGGDVFESFAGQGNDAQLNSQTNAVND
SYIGARGLPPEFIKELEELYGLDKPAHERFLMMLWNYMTLDFGESYFRKIDVVDLVLEKMPVSITLGLWS
TLIAYAISIPLGIRKAVRDGSRFDTWTSGLIIAAYAIPGFLFAILLLVLFAGGSYWQIFPLRGLTSDNFS
DLSLLGKVLDYFWHIALPLTAYTIGAFTTLTLLTKNSFLDEIKKQYVITARAKGLSESRVLYGHVFRNAM
LIVISGFPGVFLSVFLGGSLIIETIFSLDGLGRLGFEATVARDYPVMFGTLFVFGLIGLLVGILSDLTYV
LVDPRIDFERREG
>gi|56698359|ref|YP_168732.1| oligopeptide/dipeptide ABC transporter periplasmic substrate-binding protein [Ruegeria pomeroyi DSS-3]
MAHMPTQPGGRALTTRPRAATRARALDIRPGVMLLFAGLLLMALAGIARAEETIIKSHGFSEFGDLKYPE
GFAHFDYVNPDAPKGGELSYAAVGTFDNLNPFTRKGRAAARSADQYESLLFPSYDEPASYYGLVAESLEY
PESQDWVIFNIRPEARFSDGTPITAEDVVFSHELLLEQGLKSYAEAVRKRIPKAEALDSHRVKFHFAPDI
PRRALITQVGGTPIFSKAWFMADPEKRRLDEPRLEQGIGSAPYVLDSFDINRRITYRRNPDYWGADLNVN
VGRNNYDSIRVEYYTDTIAAMEGFKAGNYTLRQENNSKSWATAYDFPAIEKGHVIKAELRDGDVPSASGF
VINMDRPQFQDIRVRAAVQLAFNFEWTNESLQYGLFQQRHSFWQGTPLEATGLPEGREREVLEALGDALD
PAVLSEEPVSAHTSSPDRQNDRKNLRRAMKLLDEAGWAVDGDGIRRNGAGETLRIEFLSDEPTLDRIIQP
FVDNLKVMGIDARYNRVDDAQFTLRRRDRDFDMIMGGYPMSLQPSTGLYQQFGSEAAAYSLFNPSGVHGP
DIEPLIDGVVAASTTEELQANVRALDRVLRAKRIMVPTWYLGKYWVAYWDKYSYPENLPPYALGLEDLWW
VDADRAAALKSSGALR
>gi|56698360|ref|YP_168733.1| cytochrome c552 [Ruegeria pomeroyi DSS-3]
MFDTMTVTKAAAGLFGAFLALLLAKWAAETVYHVGGHGDEPAYAIEVAEAEEASGTEETVSFEELMASAD
AAKGEKVFKKCAACHKVNGEDATGPHLDGVVGRAVASVAGFGYSGAMQGHGGDWTPEALDEFLTKPSAAV
PGTSMSFSGLKKQGDRVDLIAYLQSVSN
>gi|56698361|ref|YP_168734.1| prephenate dehydratase [Ruegeria pomeroyi DSS-3]
MLHGNDPMTHRIAFQGEPGAYSHEACRNARPDMEALPCRTFEDVIEAVRRGEAELAMLPVENTTYGRVAD
IHRLLPHSGLHIIDEAFVRVHINLLGVPGATLDDIRDAYSHLVLLPQCAGFLKQHGITGRVSPDNARAAR
EVAERGDKSHAALASELAGEIYGLNVLARHIEDTDNNTTRFLVMSRETDDSRRGDFGMITSFVFEVRSIP
AALYKALGGFATNGVNMTKLESYMLDGSFSATQFYADIVGHPEDANVRLAMDELNHFTTNVEILGVYPAA
QPRG
>gi|56698362|ref|YP_168735.1| hypothetical protein SPO3540 [Ruegeria pomeroyi DSS-3]
MAPAQRAQRLSISLANSAIRSLNRRVMFLRASFSDCRNRRADSVFAFNSTEKLILVRRGDSASNSITTSP
LMPLL
>gi|56698363|ref|YP_168736.1| NUDIX family hydrolase [Ruegeria pomeroyi DSS-3]
MKTAEQVTFGGSGLDRAAHLRGDGEAQKRMSADPRARCLLLWRGKLLVEGERLERLAWVGPTHPLVTEGP
GGEAETPIFLGLDENGAPLFAQDISAWGAEGQDLTGLGGFVDRSEQQHPDLPQGQVFAELRRIMTRLSPR
DAELAATAKAVIGWHASHRFCARCGARSEIAQAGWQRGCPDCGGQHFPRTDPVVIMLITHGDQVLMGRSP
GWPEGMYSLLAGFVEPGETLEAAVRREVLEEAGVPVGAVTYLSSQPWPFPASLMFGCAGEALSRNLTIDP
VEIEDAIWVSRSDMMLAFAGEHPRLLPARKGAIAHFLLQNWLADTLD
>gi|56698364|ref|YP_168737.1| 2`,3`-cyclic-nucleotide 2`-phosphodiesterase, putative [Ruegeria pomeroyi DSS-3]
MQPSKQALSSAPHAQDAATLRVRLLATTDLHMQLTGYDYYSDRPEKTGGLARLAPLIAAARAETGVDLSL
LFDNGDSIQGTQMGDIAARHPSAPHPLMRAFSYLGYDALGLGNHDFNFGLEVLDQVLEQAPCPVVCANAH
RLDRATPWQQEVILEREVRTGADVTLLRIGVLATLPPQTVDWDAHLLSGRMRVDGIVEAARHAVTRLRAA
GCDLIIALAHSGLAEADAAPDQENAVIPLAALDGIDAVIAGHTHLRLPSQDAAPLPHTDRANGLVHGKPV
VMPGHHGSHLGIIDLDLRQTPGGRWRVARAQAVLRPAEGPADTALMQLLAADHAATCAAANQPAGHADDA
MHSYFTFVAPDRGLAKVAAAQAAALRPFLAGTPLADLPLLSSVSPLKAGGRAGPDHYTDVPAGPLSMRHV
ADLHMFPNELRALVLTGADLREWLEMAAGVFLSPAPAGACDMLLDTSVPGHNFDSLYGLTYEIDPRAPPR
YDIGGRLIADENRRIGSLCHNGTPVDDRQKFVVALNNYRANGGGHFLMLDRGEPVPLPSLRIQSALHDYL
SGRLPADPLEQAPHPWRLAPLPGQSAILRTGPRARDHLDELAGRDISDLGLDAEGFLRLRVGL
>gi|56698365|ref|YP_168738.1| hypothetical protein SPO3543 [Ruegeria pomeroyi DSS-3]
MRVRHPPVLRCFATSKPVSLALPDLGWSPFFATQAAALSGAYVARAEALVPFLTVLAVNACGPTDLGPIL
AWCHSDRTGALVDSSGVCKTTLMISQTDAGEATVGIREGARNSESVAEARAPDKAFDKMVRAVRREMIGR
NKR
>gi|56698366|ref|YP_168739.1| hypothetical protein SPO3544 [Ruegeria pomeroyi DSS-3]
MLDMQASVVVEDFHFPSGSAQLSARLYLPAGTPQVAVVINGATGVPREYYQHFATWLAAERGIACLTYDY
RDFGHSLRGPLAASTATMSDWALIDMPAAYAEMQRRYPDLPLWVIGHSVGGMLGPLQPGIEPIARMICVC
SGLVHHSDHPWPYQALARLFWFGHAPLLVKTLGYLPGRRIGFGSDLPPGVYWEWRRWCTTPGAYLPEMGD
RLPQADWSRSGAPVDMFAFEDDTTIPPNCVWRLADVYGETVRRHLLHPRAFGLREIGHLGAFARRNAALW
PRLIAP
>gi|56698367|ref|YP_168740.1| TetR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MTQRPLPTKDRLIRAAAQLFQRSGYHGVGLSELLAEAEAPKGSLYHHFPNGKSDLALASATWASDEMLRL
IAASFEPADSFHAGMEVLCGKVAKLFDKSGQWDGCPISSTLFEGPDNAAFRAHAHHLFEGWITEGAHHAS
RFGLADPQKTAETMFILLQGGWMLARARQSSDVLRRLPEMLPGAD
>gi|56698368|ref|YP_168741.1| zinc metallopeptidase, putative [Ruegeria pomeroyi DSS-3]
MRLKGVRGSRNVEDRRGQRGGGGKGIGGRGLGIGGVLLLLVIGAFTGIDVTPFLTEQPQAPQSAPTELSE
EERQAGEFVSRVLTTTEEVWTGVFRDQLGREYTPPTLVLFSQVTSSPCGGASGATGPFYCPADQKAYLDT
DFFATLARRLQAGGDFAAAYVIAHEVAHHVQNQLGILGKVDQARRRSSQVEANALTVRLELQADCLSGVW
ARSVWGLMEQGDLEEALNAARMIGDDRLQRQAGRVPQPHTFTHGTSAQRAAWFERGFESGQVATCDTFNT
NRL
>gi|56698369|ref|YP_168742.1| hypothetical protein SPO3547 [Ruegeria pomeroyi DSS-3]
MAGPRHPVPPRGGRRMIWTTQTHEFAATLCRRTGRPCPALSGLAENLTRALRRAEPMTDASFEIEGHCEM
PPCGAGCLARYAASHSRVRVFCGVDEDTALPHLHRFADALLGSEGGGFAAGSGPVPCAMVEARAHAAQVS
APVQPTA
>gi|56698370|ref|YP_168743.1| hypothetical protein SPO3548 [Ruegeria pomeroyi DSS-3]
MAQLVLYALKVGGGTLAICQLPGISGDYAGDVDLIGSWAPGLVISMTTEVEMLQHGARNFGADVQSRGCR
WAHLPVEDFGTPGREAQAKWSAISASARHALRGGGRVLIHCKGGCGRSGMAALRLMIETGEAPKAALAHL
RSVRSCAVETDAQMDWALAGRAIRE
>gi|56698371|ref|YP_168744.1| hypothetical protein SPO3549 [Ruegeria pomeroyi DSS-3]
MFQGWNRIGPQMAGAFPSLEIDADAYRGIRICSVVSLPVGGNAVRDDDTSASGAGDDANSDNFGSNLING
QQGDDFIVAVDDRSDLGKVDTVKGGVGRDTLVVDEGDLVTTRGGADQDILETYSGVADGYDVVTITDFDT
ARDVLTLQGEASLLRPGNGDETPVSVQELDDQTGTMVLINGIRVAHLIGAQGVSPDQIRVYIDNR
>gi|56698372|ref|YP_168745.1| DNA polymerase III subunits gamma and tau [Ruegeria pomeroyi DSS-3]
MSDAPSTPYQVLARKYRPETFADLVGQDAMVRTLKNAFAADRIAQAFIMTGIRGTGKTTTARIIAKGMNC
IGPDGNGGPTTEPCGKCEHCVAIMEGRHVDVMEMDAASRTGVNDIREIIDSVRYRAASARYKIYIIDEVH
MLSTSAFNALLKTLEEPPAHVKFIFATTEIRKVPVTVLSRCQRFDLRRIEPEDMIALMRRIADAEGAQIA
EDALALIVRAAEGSARDATSLLDQAISHGAGETSAEQVRAMLGLADRGRVLDLMDMILRGDAGAALTELG
AQYAEGADPMAVLRDLAEITHWVSVVKITPDAAEDPTVSPDERARGQQMADALAMRVLTRMWQMLLKALE
EVAAAPNAMMAAEMAVIRLTHVADLPSPEELIKRLQDAPPPPNPGGGPRVGQGASAPAQNGVSASYAPAP
RGGGGGPVAALAQDPQTALARFPTFEHLVELIRANRDGKLLADIEMDLRLVSYQPGRIEFQPTERAPTDL
AQRLGSALQRWTGNRWAVSVVAQGGGKTIDEIRNAEKYALEEKAREHPLVQAVLAQFPKARITHIETPEQ
RAAKVVTEALPEVEDEWDPFEDG
>gi|56698373|ref|YP_168746.1| acetyltransferase [Ruegeria pomeroyi DSS-3]
MTPVAPYRIAPDSPQIGAILALIRDSFAFMDGRIDPPSSMHRLTEQAVAAQAAAGEVWALGAPPVAVVFL
TVKPGRLYLGKLAVDASMRGQGLARRLVAQAETRARILGLPVVELETRVELVENHATFARLGFAKTGETA
HPGYDRPTSITMQKRLF
>gi|56698374|ref|YP_168747.1| oxidoreductase, FAD-binding [Ruegeria pomeroyi DSS-3]
MAMADVTIRGAGIFGLSIAWACVLRGARVQVVDPFGPGAGSSGGLVGALAPHVPENWNAKKAFQFDSLIM
AEGFWAGVEAAGGVSPGYGRTGRIQPLADERAVDLADERAENARTLWQGQAEWRVCPVDEMGSWCPPSPT
GLVVHDTLSARMHPRRACAALVGALAVRGVEVLAEAPDRGQVIHATGIAGLEELNRARGRLVGTGVKGQA
ALLRFDAGRQAPQLFADTVHIVPHADGTLAIGSTSERDYDDPTSTDAALDTVLDRAMQAVPLLHGAEVIE
RWAGVRPRSRSRAPMLGAHPLYPDQFIANGGFKIGFGMAPKVAHVMAELVLEGQDNIPQDFRPEASL
>gi|56698375|ref|YP_168748.1| hypothetical protein SPO3553 [Ruegeria pomeroyi DSS-3]
MVDQQAKLSWTEDRIPVSDRFDDPYFSLENGLAETRHVFLAGNGLPGRFTPGFHIAELGFGTGLNMLTAW
AAWEGAGIETPLRFTSFEAYPMAPADMARALAAFPELGPWAERFLSAWAGTPCDLGTLQLDVVQGDARQT
LPEWTGRADAWFLDGFSPAKNPELWQEDLLAHVANRTAPGGTVATYTAAGFVRRGLEAAGFTVTRLPGYG
RKRHMTQGVLR
>gi|56698376|ref|YP_168749.1| hypothetical protein SPO3554 [Ruegeria pomeroyi DSS-3]
MTQGTARAQQNNIPVGIALMLAATVVFALQDGISRHLASSYNTYMVVMIRYWFFAAFVIALAARSRGGLR
AATRTAQPGLQIFRGLLLASEICVAVFAFTVLGLIESMAVFICYPLLVAALSGPVLGEKVGWRRWAAIGV
GLVGVLIILQPGMGVFNPWAVVPLISALMFALYGLLTRYAARQDSTATSFFWTGVTGAVAMTAVGLWFWE
PMSAPDWRWMALLCVSGALGHWLLIKCYEMAEASAVQPFAYFHLMWTAILGITVFGETLRSAVIIGAALI
VAAGLFTLWRERAQSRSR
>gi|56698377|ref|YP_168750.1| Slt family transglycosylase [Ruegeria pomeroyi DSS-3]
MVRQEMQGMSRVLIASLAAIFWCFAAIGPVWADAAANLRAALREMRAENWTEALRVAGARGSVSRDIIVW
HWLRKSYGTDGDALVFLNRRGDWPGLDYLRRQSEPQFTLSPPERVLEFYSGAPPQTAEGVLNYAVALLAT
GQRGDAEAELVKAWRTLPMGAGLQRDYVENYGKLLAPHHVARLDRMLWEGYTISAKQMLSLVDEGQRKLA
QARIGLQDRVPGIDALIAAVPVALAQSPGLAHDRFVWRDRKELDDSAIDLMLERSTSADALGEPDKWGQA
RARLTRLTMRQDRNDRAYQMAARHFMTPGMGYAYADLEWLAGYLALAKLDDPAAAVAHFQRFDAAVNSPI
SKGRAGYWLGRAYAALGDADKAHAAYAMGAEHQTSFYGLLAAERIGRPFDPTLANPPATPPWREAAFMSS
SVLEAGLLLLRAGELDLAERFLTHLAESLDPVQATQLAEMALEMQEPHLSVMIAKRKAQEGVVLTGAYYP
LHPVGRLNLPMAPEMTLAIARRESEFDPVVISGAGARGLMQVMPATARLVADALGILGGHSTDSLTADWE
YNAKLGANYLAELAGEFDGNVVMMAAGYNAGPNRPISWMERFGDPRSGTPDIVDWIEHIPFEETRNYIMR
VTESLPVYRARLGKEPLPLPFSAELAGSTLRAFAPQGE
>gi|56698378|ref|YP_168751.1| dihydrodipicolinate synthase [Ruegeria pomeroyi DSS-3]
MFKGSMPALVTPFRNGELDLEALKRLVEWQIGEGSTGLVPVGTTGESPTLSHEEHETVVAEVVKAAAGRV
PVIAGAGSNNTTEAIRFVQFAQRIGADAALVVTPYYNRPTQRGLIAHFTALHDCAEIPIVIYNIPGRSVV
DMTPATMGALAKLPRIVGVKDATGDLARVSQQRASCGADFIQLSGEDATALGFNAHGGVGCISVTANVAP
RLCAEFQQATLAGDYAKALDYQDRLMPLHEAIFIEPGLVGAKYALSKLGLCSEEVRSPLTGLEDSTKAAI
DAAMKHAGLL
>gi|56698379|ref|YP_168752.1| dimethyl sulfoxide reductase, C subunit, putative [Ruegeria pomeroyi DSS-3]
MHPAPSVILFTTLSGLGFGLLFFLGLGLPSVSGWVAFVFFVIAYAMAVGGLLASTFHLGHPERAWKAFSQ
WRTSWLSREGCAAVAALLVMGLYALGLVFLDQRWSLLGGLGALLSLGTVFTTSMIYAQLRTVPRWHSPLT
PVLFLAFSLAGGALLAGQVRLALILLVSAALVQLVWWRQGDGALARSGTDLASATGLGQGGVVRAFEPPH
TGSNYLLREFVHVVGRKHAAKLRVIALVLAFVLPVLLLLLPFGHALALLAVLSHLAGVAVSRWLFFAQAE
HVVGLYYGKR
>gi|56698380|ref|YP_168753.1| iron-sulfur cluster-binding protein [Ruegeria pomeroyi DSS-3]
MPRKFVEFSCVCPWLLERDMTELPQKTDRKLGLVIDLDTCVGCHACVISCKGWNTENYGAPLSDQDPYGA
DPSGTFLNRVHSYEVQPPEGHAQLVHFPKSCLHCEDAPCVTVCPTGASYKRSEDGIVLVNESDCIGCGLC
AWACPYGARELDLAEGVMKKCTLCVDRIYNENLPEEDRVPSCVRTCPAGARHFGDLGDPDSAVSHLVAER
GGMDLMPEMGTRPVNKYLPPRPKDQIEAQIDILAPLLAPVADEPKGFMAWLDKALEKL
>gi|56698381|ref|YP_168754.1| oxidoreductase, molybdopterin-binding [Ruegeria pomeroyi DSS-3]
MSHHQPKIETSPHVSDEVRKTTCYMCACRCGINVHMKDGPDGKKRVAYIEGNREHPVNKGVLCAKGSAGI
MQVNAPSRLRAPLKRVGPRGSGEFQEITWDEALEIATGWLKPIRENDPSKLAFFTGRDQSQSFTSFWAQN
FGTPNYAAHGGFCSVNMAAAGIYTMGGAFWEFGQPDWDHTKLFILLGVAEDHDSNPIKMGIGKIKARGAR
VVGVNPIRTGYNAVADDWYGITPGTDGLLILSLIHVLMKAGKVDLDYLARYTNAPCLVIDNPGGADHGLL
LRDADDKVLVIDRASGELTPFDRPGVRPDLSGSTEVNGRICRTVMQAMAERYLSAEYAPEAVAERCGIPA
PRIRALAAEIARVAFDEAFEIDQEWTDFRGETHNVMTGRPVSFHSMRGVSAHANGFQTCRALHLLQILLG
TVEVPGGFRFKPPYPKPVEAHPKPHCKATPGAPLDGPHLGFVRGPEDLALKPDGSPARIDKAFTWENPMS
SHGLMHMVISNAHAGDPYKIDTLFMYMANMSWNSSMNTRGVMDMLTDKDESGEYVIPRIIYSDAYSSEMV
AYADLILPDTTYLERHDCISLLDRPICEADAAADAIRWPVIEPDRDVRGFQTVLVQLANKLQLPGFTDES
GAAKYTDYADYIVNHQRKPGIGPLAGFRGEAGDKAGRGEVNPDQLDRYIENGGFFVEHVPDGAQYYKPWN
TAYQDWAVGMGLYDSPQPYLFQLYSEPMRRFQLAAEGHGERQPPDHLRARIGARLDPLPIWYETDQQGNE
GFTVNALTQRPMAMYHSWGTQNAWLRQLHGRNPLYVPTKIMREQGMKDGDWARLTSPHGEIVVPVMEMAA
LNENTVWTWNAIGKRKGAWALEPDAPEATKGFLLNHLIHELLPPKGDGLRWANSDPVTGQAAWFDLKVKI
ERVAGPEERAESQPEFPALKSPVGTGPKELTWKVGK
>gi|56698382|ref|YP_168755.1| phosphate acetyltransferase [Ruegeria pomeroyi DSS-3]
MMTQTPIDLLLSDPPARRATVALSEGSDPRVVAGALAAHSAGIADVILVGQAAEIRAALKAQGAPADSLT
IHDPDSSPLTAEFAAAYYGLRRHKGVSEAAALAAVRTPLVYAAMLVRGDHAVGTVGGAVATTSDVVRTAI
QVIGAAPGAAMVSSFFLMYPPEAATAHARAMLYSDSGLVIDPSVAELAAIAAASAASCRALLRAEPKIAM
LSFSTKGSARHPHVSKVTDALARLRADHPDLDADGELQFDAAFVPSVGASKAPGSDVAGQANVMIFPNLD
AGNIGYKITQRLGGYTAIGPVLQGLAKPANDLSRGCVAGDVTQMIAVTVLQAMAQTQ
>gi|56698383|ref|YP_168756.1| sulfoacetaldehyde acetyltransferase [Ruegeria pomeroyi DSS-3]
MECVLMKMTTEEAFVKTLQMHGIQHAFGIIGSAMMPISDIFPAAGITFWDCAHEGSGGFMADGYTRATGK
MSMMIAQNGPGITNFVTAVKTAYWNHTPLLLVTPQAANKTIGQGGFQEMEQMRMFADCVAYQEEVRDPSR
VAEVLNRVIMNAKRASAPAQINIPRDMWTQVIDIALPAIVEFERPSGGEEAVAAAAEMLSNAKNPVILNG
AGVVLSKGGIAASKALAERLDAPVCVGYQHNDAFPGSHPLFAGPLGYNGSKAGMELIKTADVVLCLGTRL
NPFSTLPGYGMEYWPADAKIIQVDINPDRIGLTKKVSVGIIGDAAKVARGILAQLSDTAGDEGRAARKDR
IAQTKSAWAQQLSSMTHEDDDPGTTWNERARADKPDWMSPRMAWRAIQAALPREAIISSDIGNNCAIGNA
YPDFDEGRKYLAPGLFGPCGYGLPAVVGAKIGCPDVPVVGFSGDGAFGIAVNELTAIGRGEWPAVTQIVF
RNYQWGAEKRNSTLWFDDNFVGTELDQRVSYAGIAKACGLQGVVARTMDELTAALAKAIEDQKAGKTTLI
EAMINQELGEPFRRDAMKKPVRVAGIDKADMREQQV
>gi|56698384|ref|YP_168757.1| transcriptional regulator [Ruegeria pomeroyi DSS-3]
MAIPVETFFLKQGAQGTLQAQIQQMIAEGILSGRFHVGEKLPSSRRLATHLGVSRITVTLAYTELLANDY
LTSRGRSGYFVSDNAPIPPSYAPMERDQETVDWSRAIARKFSGGDTLQKPADWRDYRYPFIYGQADPTLF
DHANWRLCAVRALGQKDFASLTADYVDQDDPLLIEFIARHTLPRRGISARPEEILITLGAQNALWLAARV
LLNRRRKAAIEDPCYYALRELLIQSRCNLVSLRVDLDGLPPDAIPDDTDVIFTTPSHQSPTTATMPVPRR
HALLERAREIDAMIVEDDYEFELAFLGAPSPALKSLDRDGRVVYVGSFSKSLFPGLRLGYMVGSEPFIRE
ARALRSLVLRHPPGHIQRTAAYFLSLGHYDAQIRRMSSVLLQRRQEIERAIAQHGLTIAGRGVYGGSSLW
MQAPAGVDSEALAMALRGESVHIEPGTAFFSGADRPRNYYRLGYSSIPTSRIAPGIERIAGAIARHAG
>gi|56698385|ref|YP_168758.1| ArsR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MWDEAAGGFAAMGSSARLKVLRVLVRAGQPGLTVGEIQQRTDMAASTLAHHLKALAAGGVIEQTRQGRQT
INRARFDQLEALAQFIMAECCADQCSAQIQETDNG
>gi|56698386|ref|YP_168759.1| permease, putative [Ruegeria pomeroyi DSS-3]
MVEITSSPRRAPGRLTAWLKTPWTVAAGLLGAVALLDPAQLGAVARFAATALAGTAPYILFAVLLLAWLK
ATGAEVLVARAFEGRETRMILLAALFGGLAPFCSCEVIPFIAGLLALGAPLSAVMAFWLSSPLIDPPTLL
ITAGALGWPFAIGKAVAAVGLGLFGGFVVRALSAGGALSDPLRRAKSSCCGCGAPKPAAPHWRFWTEAER
TRIFRAEFLSNGMFLLKWMTLAYVIEALLVTYVPAEVIAGLVGGEGVMPIVVAALVGMPAYLNSYVAPPL
LAGLMEQGMTGGAAMAFMVAGAVSSIPAMAAVWSLVKPRVFALYLGLGLTGAVIAGMLFQTL
>gi|56698387|ref|YP_168760.1| hypothetical protein SPO3565 [Ruegeria pomeroyi DSS-3]
MLDLLSKLIGPHRAVSVYAFLHTRGAALAAGALFAAILGGLLLFGRGEEPHEHEAFLTLDVLSLTAINGD
LRNGAIVSVRLPGGQATSITSTEGPVAASVTTTACVEKRVYVTSGEARYRLKLPQHCTGQ
>gi|56698388|ref|YP_168761.1| hypothetical protein SPO3566 [Ruegeria pomeroyi DSS-3]
MAKPLMAKATAVWLVDNTTISFKQIADFVGMHELEIQGIADGDVAAGVKGFDPIANNQLTQEEIDKAEQN
PLHKLKLKFNPAAAGEEKRRGPRYTPLSKRQDRPNAILWLVKFHPELSDGQIAKLVGTTKPTIQSIRERT
HWNISNMQPIDPVALGLCRQSELDSVVQKAAAKKAAEGGVMSDDERRKLVSTEQSLGMDTGPRIPTAIEG
LENFSLSEPISTSDDDEEDHRSIADADSFFNLPKGGTDDEDEDDDPRY
>gi|56698389|ref|YP_168762.1| ribonuclease T2 family protein [Ruegeria pomeroyi DSS-3]
MRWLVLWALTATAAWAEGEQAGDFDYYVLSLSWSPNWCETTGDARGADQCDARHDYGWVLHGLWPQYHQG
WPSYCRTPEAPPSRRMSAEMADIQGSSGLAWHQWKKHGTCSGLSAAAYYALSREAFDSVIRPPVFRQLDK
AVKLPARLVEEAFLKANPALEPDMVTVTCADGFIQEVRICLSTSLDPVPCGRDVVRDCRLKDAVFTPIR
>gi|56698390|ref|YP_168763.1| hypothetical protein SPO3568 [Ruegeria pomeroyi DSS-3]
MCPGLHLCLWHARICGYQGFRHSFPGVSPMTRILALVLAAATATAAWSQELIDKGFVHGWNLMVDPALGN
GCLIQTVYEDLSVVRLGYDRTGNRGYFTVFNKNWGSIEDGGSYPITFDLDGERFEATAIGANKGKVRGAT
VFFTDREFVHAIAQRKVMTVYGAEGQQVMAIDLKGTSKALEYARECQKAQN
>gi|56698391|ref|YP_168764.1| recombination protein RecR [Ruegeria pomeroyi DSS-3]
MAGSTKDIDALIELMARLPGLGPRSARRAVLHLIRKRALLLTPLADLMGQVAATARECLNCGNVGTSDIC
DICTDERRATGELCVVEDVADLWAMERSGVFKGRYHVLGGTLSALDGVGPDELRIPRLADRVTAEAISEV
ILALNATIDGQTTAHYIADQLGGRVRLTSLAQGVPIGGELDYLDDGTISAAMRARKEL
>gi|56698392|ref|YP_168765.1| hypothetical protein SPO3570 [Ruegeria pomeroyi DSS-3]
MFKGLGGLGDMAKMMKSAQELQTKMAQMQEDLNSVLVTGESGAGLVKATATAKGELKGLDIDPSIFNGDD
KEVVEDLILAAIKDAQAKAAEKAQEEMAALTEAMGLPKDIKLPF
>gi|56698393|ref|YP_168766.1| AraC family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MTMTMQIVPNIALVDYPGAQRAALHGLADMFRLIARLDPEAAGPEVTIVNADTLPQQGVTALLFPPSIGG
ARGALDHPLARWAHRQHAQGALACSVCAGAFWLGHAGLLDGRPVTTHWGLEESFRETFPKARLEPEHILI
DDGDVITAGGLMAWTDLGLHLTGLWYGGAMVSRLARYLLIDPAGREQRNYSSFRPERGHGDTAVLAAQRH
MEMHLQGPLTVPQLAQVAGLPLRSFIRRFQAATGHAPATYLQALRIEKARGALERGAENIAQIAWTVGYA
DLPAFARAFKSRTGLTPGAYRARFRAAFPPGAVSRRIPLA
>gi|56698394|ref|YP_168767.1| isochorismatase family protein [Ruegeria pomeroyi DSS-3]
MTKTALILVDIQNDYFPGGAWEVPGMEAAAGQAAHLLAAARRDGVLVIHVRHEFASAEAPFFRPGSSGAE
IHASVAPTATETVLTKARPNAFVGTALLDLLQGGDIQAVTLCGAMTQMCIDATARAAADLGFAVTVAADA
CAARAVSFDGQDVPAEMVHAAFLAPLAASYGRVVPVSTLLD
>gi|56698395|ref|YP_168768.1| NADPH-dependent FMN reductase domain-containing protein [Ruegeria pomeroyi DSS-3]
MTDLTLLGLSGALRAASTNRKLLREAARLFGPSTYTEADLNLPLYDGDDEAAQGIPEAVQRLADQIAAAD
AVIISTPEYNKGPSGALKNALDWVSRTSGKPWADKPVAVMSAAGGRAGGERAQAVLRGFMVPFQPRLLSG
PEVHLADSSNQFDENGHLTGELYAQTLQSLMDKLRAEALR
>gi|56698396|ref|YP_168769.1| short chain dehydrogenase [Ruegeria pomeroyi DSS-3]
MRIIVVGAEGDVGRAVCKELGSRHEIIRAGRSRGDVTVDIADPHSVAAMYARTGPVDAVISTAGEVHFAP
LRDFDRETFMIGLRNKVMGQINLVLGGFYTVAEGGSFTLTSGVLDRDPIPMGSGAAAANGALGGFVMGAA
IEMPRHQRINVVSPGLLDVSVPRYGAWFPGHEPVPAQRVGRAYAKSVEGALSGQVIIVA
>gi|56698397|ref|YP_168770.1| MerR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MKIAEAAARSGLSIDTIRFYERSGLLPPIARGADGMRRFSPETVDWLRLLASLRETGMELRAMRRFAELY
RQGDATIPERRRILQDHAASLNGRRAALDRCAALLAHKLQRYCEIEGG
>gi|56698398|ref|YP_168771.1| OmpA domain-containing protein [Ruegeria pomeroyi DSS-3]
MTFTKLSAAAGLTAILALGACTDPASLSTNTDPNQKAKQGALIGGILGAGVGAIANDSNPGLGALAGAAI
GAAGGGLIGNSLDKQAAELRQELANDGITITNTGDRLIVSVPNDITFDTDSSTVRPGLRSDLQKVAAHLV
RYPQSSVQVIGHTDSDGEAAYNQGLSERRAGAVADILQAGGVTYDRISTLGMGENSPIASNLTPEGKARN
RRVEIVVIPRN
>gi|56698399|ref|YP_168772.1| hypothetical protein SPO3577 [Ruegeria pomeroyi DSS-3]
MRRSTRLFEIIQILRAATVPITAEDLAARLEVSARTVYRDIAALQAMRTPIEGAAGLGYVMRGGYDLPPL
NFDQEEVEALRVGLSMLARTGDSALQQAAERVCAKIDALHDPADWLRVAPWGAPADDPGQGCTPIALLRS
AVREARKIRIEYRSGEGAQTLRVLRPVGLIYHLDCTMVAAWCELRQGFRNFRTDRIWACDLLEDSFAPQA
KALRQLWQDQSGWDEAAAMPAR
>gi|56698400|ref|YP_168773.1| ADA regulatory protein [Ruegeria pomeroyi DSS-3]
MNVQTTEEGYHYGVIRRAIELIDAGGESMPLDDLAARMNMSPAHFQRIFSRWVGVSPKKYQQYLTLGHAK
ALLEERFTLLEAAQNVGLSGTGRLHDLFVRWEAMSPGDYARKGADLTIYWGWFESPFGPALVMGTERGIC
GIGFAAEAGAEATMEDLLSRWPQATFVEDPMRLRPWVLSAFGAASDRLEPVPLYLIGAPLQIKVWEALLR
IPSGQVTTYGELAQSIGQPRAVRAVGTAVGRNPVSWLIPCHRALRKSGGLGGYHWGLPVKRAMLAWEAAR
SEA
>gi|56698401|ref|YP_168774.1| MarR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MTHETDQLYQAVQATRPLLRNITAAVERGTLREGVTVGQRAILEGLSLTPGATAPQLGAALQMKRQYISR
ILQEVQRAGLIERRTNPEHARSHRYWLTPRGEAIITAIRADEMAKLALFSEGFSSVELTAYHKVQLALTR
FFADLAKEA
>gi|56698402|ref|YP_168775.1| isochorismatase family protein [Ruegeria pomeroyi DSS-3]
MSFLWIIPAGFVIAVLYVLLEIRKIGTPTKGPVIERATRPGTALVVIDMQSDFTALPVWEAAQLNTAMEN
IRTAVDAARRTGMPVIAVRQVYKAGLARLLNGWFNQGRGNAGSPGIGLDPRLGLAPDVEVEKSMGDAFSE
PAFVRYLEENRIGTLILTGLDGCHCVKNTAFGALNRGYAVRIDPKAVLAANDAGWSKMKRNLTAAGAEMG
ATAA
>gi|56698403|ref|YP_168776.1| endonuclease III [Ruegeria pomeroyi DSS-3]
MAKQLDYHTIREIFTRFQAADPEPKGELEHVNAYTLVVAVALSAQATDAGVNKATRELFKIADTPEKMLA
LGEEGVTEHIKTIGLFRQKAKNVIKLSRILVEQYGGEVPNSRAALQSLPGVGRKTANVVLNMWWRIPAQA
VDTHIFRVGNRTGICPGKDVDTVERAIEDNIPADFQQHAHHWLILHGRYHCKARKPMCGTCLIRDLCQFE
DKTL
>gi|56698404|ref|YP_168777.1| PfkB family kinase [Ruegeria pomeroyi DSS-3]
MKTYDVVGIGNAVVDVISQADDSFLDLMGIEKGIMQLIEQERGEVLYASMKERVQTPGGSVANTIAGAGA
LGLDTAFIGRVRDDALGHFYADAMNEGGIDFVNPPVAGELATSRSMIFVSPDGERSMNTYLGISTTLSSA
DVPQEVTGNAKLMFLEGYLFDHDAGKSAFREAARATRAAGGKAGIAISDPFCVDRHRADFLSLIQHDLDF
VIGNEAEIQSLFETDHLDDALMLTSGICPLVVCTRSGDGVTVMDGTLRIDVPVEKVVPVDATGAGDQFAA
GFLFGMATGRDYETCARIGNICAREVISHIGPRPEANMVELLKENGLL
>gi|56698405|ref|YP_168778.1| transcriptional regulator PecS [Ruegeria pomeroyi DSS-3]
MDHVDVIIRQWAAERPDLDTRAMAVIGRVARLSMAYTQGMQRTFGRYGLNPAKFDVLATLLRSGPPYALS
PGALLDTTMVASGTMTNRIDRLEQDGLVERRKNPEDSRSVIIALTPKGQALINEMMAAHVATQSQLLEGL
TAEEQEALTTLLAKALNSAETSNSHADQA
>gi|56698406|ref|YP_168779.1| drug/metabolite transporter family membrane protein [Ruegeria pomeroyi DSS-3]
MRPPMSRTTDIALTAIAPAIWGSSYFVTTQFLPAHSPFVVALLRALPAGLLLMLLVRKLPPRGWIGRLLI
LGALNFAVFWSLLFVAAYRLPGGVAATVGAVQPLLVVFLSAVALGTQIRLGAVLSALAGIVGVALLLLGP
EARLDTVGVLAGLGGALSMAVGVVLTRKWRPDVPLVTFTAWQLTAGGLLLIPVAWLAAPDWPGLSLTNLA
ALAWLGLIGGALTYILWFRGLARIEPAAVSLLGILSPLTAVILGWLALGEALSPVQGLGAVIVLGAVWIG
QRPPGASRLSNLVQPRCGAKAATTRS
>gi|56698407|ref|YP_168780.1| NUDIX family hydrolase NudH subfamily hydrolase [Ruegeria pomeroyi DSS-3]
MTPEEIAALPYRPCVGVVLMNGDGFVFVGQRMDQNTDAWQMPQGGVDEDEDPFEAALRELWEETGVTADL
VEMVAETDGWLPYDLPHDLVPRIWKGRYRGQEQKWYLFRFLGRDDQIDLETGHPEFSRWKWQDPDRLVAE
IVPFKRDVYERVVAAFAPHLG
>gi|56698408|ref|YP_168781.1| 2,4-dienoyl-CoA reductase [Ruegeria pomeroyi DSS-3]
MTAYPHMLAPLDLGFTTLKNRVLMGSMHTGLEETKDWNRVAEFYADRARGGVALMVTGGIGPNMEGSVLP
GASMMTSDKDVANHSIVTARVHEAGGKIAMQILHAGRYAYGPKCVAPSPVKSPISPFPPTELDEEGIEKQ
ITDIVNAAVLAQQAGYDGVEIMGSEGYFLNQFLVTHTNKRTDRWGGSYENRMRLPIEVVRRTREAVGTDF
IIIYRLSMIDLVPNGSTFDEVVQLAKEIEKAGATIINTGIGWHEARIPTIATSVPRAAFAWVTKKLMGQV
SIPVITSNRINTPEVAEEVLATGCADMVSMARPMLADADFVNKAAAGQGDRIAPCIACNQACLDHTFSGK
LTSCLVNPRACHETELVVAKAAAPKKVAIVGAGPAGLSTAITAAQRGHAVTVFDKSDEIGGQLNMAKQVP
GKEEFWGLVDWYRVMLADLGVTLKLGKAVGAGDLSGFDEVVIATGVSPRDPAIPGQDRANVLSYIDVLRH
KKPVGKRVAVIGAGGIGFDVSEFLLEEGHSPTIDLPQWMKEWGVSDPAEHRSGLAPEGPQPGKPEREVTL
LQRKAKAHGKDLGKTTGWIHRATLKMKGVSFVGGVNYEKIDDEGLHISFGEARENPTLIACDTVVLCAGQ
ISDRSLADALEAKGVHCHVIGGADVAAELDAKRAINQGTRLALTF
>gi|56698409|ref|YP_168782.1| hypothetical protein SPO3587 [Ruegeria pomeroyi DSS-3]
MSENALYEPLSASDPLFSGYRFRTNDTGAPQTEGLGLGLGGENGLKPGDPVALDQHYVRAVAFTREAGGK
VSWFNSLFSAQASGKSVGVLQEAKSFMVGTIDGQQVEIGVAVLLKIEASSFKSEAQVSVANIAAEAQLGL
SRAEMEISVRGFTGALGDMLPAPSEVDLTSYTTYLNAFERIQKHVFGPGGTAQYSPVVLGKLRTDAGGD
>gi|56698410|ref|YP_168783.1| hypothetical protein SPO3588 [Ruegeria pomeroyi DSS-3]
MIAVIFEVEPAPGQQEADLDLAGRMRALLDDMPGFISVERFQSLTNPGKLLSLSFWEDEEAVARWRQLTA
HRGAQTRGREALFAGYRLRVAGVIRDYGMHERDQAPEDSRARHG
>gi|56698411|ref|YP_168784.1| hypothetical protein SPO3589 [Ruegeria pomeroyi DSS-3]
MLTCIIRYHIDPTKRAQFERYARTWGQAIPRCGADLIGYYAPHEGSSTLAYGIYNIPSLAEYEAYRTRLV
ADPLGRQNYDFAQSEKFILREDRTWLKLASAPHGGQT
>gi|56698412|ref|YP_168785.1| hypothetical protein SPO3590 [Ruegeria pomeroyi DSS-3]
MKNILTAIGIGFLATAALAGGDTAANPEARVYFANLADGDTVSSPVTVIFGLSGMGVAPAGTEAENTGHH
HLLVDRPPMGQGADGAEELTYALPADDNHRHFGKGQTEVTLDLAPGKHTLQLVMGDYTHVPHATPIMSEV
ITIEVK
>gi|56698413|ref|YP_168786.1| auxin efflux carrier family protein [Ruegeria pomeroyi DSS-3]
MIATILMGLVPSFLMVGLGGMVRGRLTPGAWQGLDKLNFEILFPALLFFAACNRPIAVQDVIRIGPAVWA
VMGLALMLGYLARRFGPERFLDFAGAWQTSWRFNTAMAFVAVPTLHLADVGQMAVAIGMAVPVANLLAVS
ALSRGGNLSLRATVQRVALNPFLLASVAGVGVGLSGYKIPDPILAPAQMLAQAAIPIALLSIGATMDWRA
LTRLDLFNGYLCAVRLVLTPALAWLLCGLLGAEPGLAAVVILFAALPTASAAHVLASGFGADRRLVATLI
AQSTLLSAVTLPLWIYLIGLGFQG
>gi|56698414|ref|YP_168787.1| LysR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MDRLTEMEAFANVVDQGGFTDAAKKMGISKSAVSKHVSSLEARLGARLLNRTTRRVSPTEIGLAYYDRAR
RVLNDAGEADALVTSMQSAPSGLLRISVATDFGVNHLSPVLSDFLAEFPDITVNMVLNNRYVELISEGFD
MAVRIGELEDSTLRARKLTETTKRMIASPKYFEKYGHPQKIDDLNEHKLLHYSSQASGNVWKLTAPSGEK
RQVRTAGWLSVNDGQSLLNAAISGLGIAYLPCYLFAEAMEQGLVEDAMPSLPDEVQGIYAVYPPGRFTQP
KVRAFIDFLVHSFADKGPMNW
>gi|56698415|ref|YP_168788.1| sulfatase family protein [Ruegeria pomeroyi DSS-3]
MNILFIMFDQLRWDYLSCYGHKTLNTPHIDRLAAKGVRFDRAYIQSPICGSSRMSTYTGRYVHSHGASWN
GIPLKVGEMTMGDHLRAAGMGCWLVGKTHMRADEEGMARLGLEPDSLIGARVAECGFDVFERDDGMLPEG
PDGYYDPDGAKEYNKFLRAKGYESDNPWHDFANSGLDDEGNVQSGWFLKNATRPANIAEEDSETPYLTSR
AMEFIEQQTGPWCCHLSYIKPHWPYIVPEPYASMFGPEHVQDVVRSDSERQNAHPLFKAFMDTKVGEAFS
RQEVRDAVIPAYMGLIKQADDQMGRLFKWLEDTGRMQDTMIVLTSDHGDFLGDHWMGEKTFFHDASTRVP
LIIYDPRPEADATRGSVCDALVESIDLAPTFVEAAGGKPAMHILEGESLIPILHGARDHTLRDHVICEYD
FSASPIAHLNDISVRQAVMFMVADKNWKLIHFEADPRPMLFDLKNDPQELVDLGGDPAHADVIAGMYDKL
FRWTRRQSQRTTRSEEQLIAMRTKSRKRGIVLGIYDENETPLELTVKYRDRKARPYKDYLKG
>gi|56698416|ref|YP_168789.1| phenylalanyl-tRNA synthetase, alpha subunit [Ruegeria pomeroyi DSS-3]
MDDLKAKYLGQIAEAADEAAIEAIRLAAVGKKGEIALMMRELGKMTPEERQTAGPALNALKDEINSALAA
KKAALADAALDERLRSEWLDVTLPARNRRQGTLHPISQAREELTAIFAEMGFSVAEGPRIDTDWYNFDAL
NIPGHHPARAEMDTFYMHRAEGDNRPPHVLRTHTSPVQIRSMEKMGAPLRVICPGGVYRADYDQTHTPMF
HQVEGLALDRDISMANLKWTLEEFVKAFFEVDDVELRFRASHFPFTEPSAEVDIRCSWEGGQLKIGEGDD
WLEILGSGMVHPKVIAAGGIDPDVYQGFAFGIGIDRLAMLKYGIPDLRAFFDSDLRWLRHYGFAALDMPN
LHGGLSR
>gi|56698417|ref|YP_168790.1| AraC family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MQSLPHDVVGYARDYRDGYVSVRHRHPRHQLIYAISGLMMAETDAMSHAIPPGYGLIVPAQQPHEIRMIG
AVRLQSLYVRAGLPRADALARCRLVTISPLLAQLIAALCEMANPWPMPPRALHLSQLILIELLAAPVSPL
ALPYPTDPRLRRVCDGLIATPASPRSLDDWAAEAGMSRRTFSRHFQLETGLSFGKWAQRLRCQAALRGLA
KGRPAARVARELGYANAYTMAAMMRRMT
>gi|56698418|ref|YP_168791.1| pyridoxamine 5'-phosphate oxidase family protein [Ruegeria pomeroyi DSS-3]
MRPITDMTELESLYAAAVPASLTKVRTRLSPLYRQWIEAARFCVVSTVGPEGTDASPRGDDGPVVRIVDD
ATLWLPDWRGNNRIDSLRNIVRDNRVSLMFMVPGCQNVVRVNGTAFLTADGQARASFERKGRQPATVIVI
TVDELYFQCAKALMRSGLWTRGDESGLVPTAGQFLREQDESFAAEAYDEGYTEYAKPRMW
>gi|56698419|ref|YP_168792.1| amine oxidase, flavin-containing [Ruegeria pomeroyi DSS-3]
MMTTSTRRQVLAAIGALGALGLGTRGARSQPQDRILVVGAGLAGLSAARILRDAGRNVTVIDARSRIGGR
VHTSRTWPDLPMDLGASWIHGQRGNPLTVLAREAGAQVVATRYDAAILKGPSGRDIDPDLRGAEQILRGA
LAEADGKSRDMSVLEALQASSGWRGADEGVRRLVLYVVNSTLEQEYGAPARQLSAWYGQEDAEFGGQDVL
FPGGFDQIAAYLARGIDIRLSAEVTGIAPGHVRLADGSRIDADAIVCTVPLGVLQSGRIRFAEPLAQKRL
AATRSLRMGLLNKCWLRFDGIHWPDDVDWIGWLGPRPGLWGEWVSLARTLRAPVLVGFNAADAATEVEGL
SDRDTVAAALEALRSMFGARFPAPRAAQITRWGQDRHAFGSYSYNAVGSRPSTRTELAGPDWDGSIWFAG
EATSAPYFGTAHGAVLSGRAAAEGILATD
>gi|56698420|ref|YP_168793.1| 50S ribosomal protein L20 [Ruegeria pomeroyi DSS-3]
MSRVKGGTVTHARHKKVLKAAKGYYGRRKSSFKVATQAVDKANQYATRDRKARKRNFRALWIQRINAAVR
SHDEALTYSRFINGLNLAGIEVDRKVLADLAVHEPEAFGAIVAQAQAALAA
>gi|56698716|ref|YP_168794.1| 50S ribosomal protein L35 [Ruegeria pomeroyi DSS-3]
MPKMKTKSSAKKRFKVTATGKVMAGQAGKRHGMIKRTTKFIRDARGTTTLSAPDAKIVKGYMPYDR
>gi|56698421|ref|YP_168795.1| pyruvate kinase [Ruegeria pomeroyi DSS-3]
MRRLRKVKIVATLGPASETYETIRALHEAGADVFRLNMSHGTHDEIRAKHQIIRQVEQDLDSPIAILADL
QGPKLRVGTFVNEAEELAEGAAFRLDLDPAPGDAGRVCLPHPEIFQVLEPGAHLLVNDGKIRLKVLDCGP
DFAECTVVTGGTISNRKGVNVPDVVLPLAALSDKDRDDLEFACALGVDWLALSFVQRARDVFEARALADG
RAAILSKIEKPAAVEAFDAILDASDGIMVARGDLGVELPVAAVPPIQKRLVRKCRAAAKPVIVATQMLES
MIESPMPTRAEVSDVATAIYEGTDAIMLSAESAAGQYPLEAVRTMDNVAVEVEADPTYTQIIAASRTAKG
TTIADGIVAAAREIAEKTDIKAICCFTQSGTTALLTARERPGVPIIAMTSLLATARRLCLSWGCHCVITP
ELERFKGAVVNAARAARAGGFAIETDQIVVTAGVPFNVPGTTNILRVAPCDERLIYNTDPG
>gi|56698422|ref|YP_168796.1| N-formylglutamate amidohydrolase family protein [Ruegeria pomeroyi DSS-3]
MTYTPFFIHGEDRRSRWLITCDHATNTVPPEICGGDLGLAREDMERHIAYDVGAYEVSRLLGEMLAAPVI
AANFSRLVIDPNRGEDDPTLLMKLYDGSIIPGNRHADAAERERRLNMCYRPYHDALARLAARPGVVLVSM
HSFTRQLRGRAPRPWQIGVLHTADQRFSDPLIARLRGEADLCVGVNQPYTGVLPGDAIDTHCTAFGRPNA
LIELRNDLIGDPAGQHAWAERLAPLLQDALADSGL
>gi|56698423|ref|YP_168797.1| hypothetical protein SPO3602 [Ruegeria pomeroyi DSS-3]
MDKQTEIEIQAAAFRRLQKHLMQDRTDVQNIDLMNMAGFCRNCLARWYQEAANEKGIEMGKDEAREIYYG
MTMAEWKANYQTEANAEKQAAFEVAFKENVTERD
>gi|56698424|ref|YP_168798.1| thioesterase family protein [Ruegeria pomeroyi DSS-3]
MADMSEFEPRFAGYAQKVRDSFARQPVMATLGARIDTLLPGRVELCMPYDRALTQQHGFLHAGIVSTVLD
SACGYAAFSLMEEEAAVLTVEFKVNFLNPAEGERFAFRAEVVKPGRTLTVATATAYAFRDGEERAIATMT
ATLMALIGRSGINQ
>gi|56698425|ref|YP_168799.1| D-amino acid aminotransferase, putative [Ruegeria pomeroyi DSS-3]
MTRTVYVNGEYLPETEAKVSIFDRGFLMADAVYEVTSVLDGKLIDFDGHAVRLKRSLDELEMAEPCSQQE
LLEIHRKLVDLNGIVAGLVYLQVTRGSDGDRDFVFPAADTPPSLVLFTQSKPSLADSPESKRGAKIISIE
DIRWGRRDIKTVQLLYPSMGKMMAKKAGCDDAWMIEDGYVTEGTSNNAYFVKNGKIVTRPLSNDILHGIT
RKAVLRLAQEAQMEVEERLFTIDEAKTADEAFTTSASAFVMPVVEIDGATLGDGTPGPIARRLREIYLDE
ARKTAI
>gi|56698426|ref|YP_168800.1| hypothetical protein SPO3605 [Ruegeria pomeroyi DSS-3]
MMTWVILTGVCLACVAVLGLLRWRDLRADNDEALRLQAFQPAPPRRFDPAMVADLPDPARKFFLWAIEPG
AELFTVAALEMQGKFGMGDKARPGYMPMTARQTLASPHGFVWAMRAGQGLRRMSGSDSAGWTRFWLAGLV
PVARFGGTQDHRRSAFGRYAAEAVMWTPAAVLPQPGITWQGIDAETARVIIAHDGMEQAIEMTVDAEGAP
KKIVFERWSNANPERQWRLQPFGAILSAPQSFAGIRIPTHVEAGNHFGTDAFFPFFIVDVTDLRFPQAAR
T
>gi|56698427|ref|YP_168801.1| mandelate racemase/muconate lactonizing enzyme family protein [Ruegeria pomeroyi DSS-3]
MRIDVSRDVFRLAQVFTISRGSRTEAKVLTVRIADGAHHGWGECVPYARYGETLESVEAQIAGLPEDFDR
AALFDLLPAGAARNAVDCALWDLESKRAGKRAWDLAGLPAPGPEITAYTLSLDTPDAMQAQAAKNAHRPL
LKIKLGTPDDMPRLEAVRAGAPDAKIIIDANEGWSAEVYADLAPHLVRLGVALVEQPLPAGQDEALIGME
RPVPVCADESCHDRASLAALKGKYDVVNIKLDKTGGLTEALELRRAALAEGYDIMVGCMVGSSLAMAPAT
LVAQGALVTDLDGPLLLAEDRETPLTFDAAGVHPPSAALWG
>gi|56698428|ref|YP_168802.1| hypothetical protein SPO3607 [Ruegeria pomeroyi DSS-3]
MMRPKRAKSAHGDESAANITRNARFSGPLVLTGIKWRPAMIETPYLLFLGDAPDQLAAKVAVGIKDWRPE
NAVGQLRMEGCKADLGLTDMDLAQAREAGAKTLVIGVANRGGVISQDWKKVLVMALEEGFDLASGLHNLL
RDEPDLVAVAEACGRKLHDVRIPSVKYPIANGVKRKGKRCLAVGTDCSVGKMYTALAMDAEMRARGMKST
FRATGQTGILITGDGVPLDAVIADFMAGSVEWLTPDNDEDHWDLIEGQGSLFHVSYSGVTMALVHGGQPD
ALILCHEPTREHMRGLPGYQLPTLEAVRDMALSLAKVANPACQVVGVSINTQHMSEADARAYLAGIEAEM
GLPATDPFRFGPGKLVDALAAM
>gi|56698429|ref|YP_168803.1| malyl-CoA lyase [Ruegeria pomeroyi DSS-3]
MSFRIQPAAPARPNRCQLFGPGSNTKLFVKMAASAADVINLDLEDSVAPSDKDSARANVIEALNTIDWGN
KYMSVRINGLDTPYWYRDVVDVLEQAGDRLDQIMIPKVGCAADVYAVDALVTAIERAKGRSKPISFEVII
ESAAGIAHVEEIAASSPRLQAMSLGAADFAASMGMQTTGIGGTQENYYMLREGTKHWSDPWHWAQAAIVA
ACRTHGVLPVDGPFGDFSDDEGYIAQAKRSATLGMVGKWAIHPKQIALANQVFTPSDDAVTEAREILAAM
EAAKAKGEGATVYKGRLVDIASIKQAEVIVAQAELIAANG
>gi|56698430|ref|YP_168804.1| short chain dehydrogenase [Ruegeria pomeroyi DSS-3]
MTMQQRKGMTMELKGKTIIITGASSGIGASAALLFASEGANLVLGARRAAELNQLTGQITQSNGRAVCLA
GDVTDEAYAHRLVDLARSEYGRLDGAFNNAGMMGEIGPVAEMSAANWTEVITTNLTSAFFSAKAQIPALV
EQGGVLVFTSSFVGVDNGGMPGMGAYAASKAGLVGLVRSLAADHAAEGIRVNALLPGGTRTAMAGDDPDT
HDFIAGLHPMKRMGEPKEIAQAALFLMSDRASFVTGTAMSVDGGISARLL
>gi|56698431|ref|YP_168805.1| hypothetical protein SPO3610 [Ruegeria pomeroyi DSS-3]
MRPQMTELTLFHTAEVHRATFDALAARIAPGARLTHVVRPDWLARAQGGIGADLADEITTALAQVPVALC
TCTTIGGLAEQAGALRIDAPMMRVAAQSGGPVLLVCCLESTKAPSTALLEAAFAAEGHAARIAHLDLSGL
WPLFTEGDGDAFAEAIARRVESALVAQPDLSAVVLAQASMAGAQARVRANVPVLASPELALRAALERAGT
>gi|56698432|ref|YP_168806.1| hypothetical protein SPO3611 [Ruegeria pomeroyi DSS-3]
MKAIWIGALAGLAMICAGALAAGPAKLQPANPQPGGLKRGLSVSYGYAKEGEHIRQLAEARSVLKAGAQR
GKALRGLDYRDTAKGENTLTSARAENVAAAIRGYIRFDAPGIYEIDFFTNDGVDARIGGQRVGHFDGRQT
CDSTIVSEVEVPQAGWYKVDITYFNRLNTSCLMMRWGQKGKGMKWVPNEVFGY
>gi|56698433|ref|YP_168807.1| AsnC family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MTKIDEINRKILHELSRDGRISNLDLAARVGLSPSACLRRVQELERAGVISGYRAVLNPAALGIGFVAYM
GVGLGEHTKAAQERFERAVARAPEVVECHNITGTIEYLLRVECADLPSYKTFHTDVLGTLPHVNSITTYV
VMGSPKDLRA
>gi|56698434|ref|YP_168808.1| amino acid transporter LysE [Ruegeria pomeroyi DSS-3]
MTYDLLIALLLFAFVSSITPGPNNLMLMASGANFGFRRSVPHMLGIGLGFTFMVVMVGVGLVQVFDAWPP
SYSLLKYASVVYLLYLAWKIANAAPAKRGAAAGRPMTFVQAAAFQWVNPKAWAMALTAISAYAPGQTLTA
VLVVAAIFGAVNLPSVSTWTVLGQQMARLLTNPRRLTVFNWTMAGLLVLSLYPVLWPG
>gi|56698435|ref|YP_168809.1| hypothetical protein SPO3614 [Ruegeria pomeroyi DSS-3]
MRRLRVWPDLAPPFEIYHDDPEHTAPEALRTDLCIPLRP
>gi|56698436|ref|YP_168810.1| AraC family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MTDYEGRILRVLNYIHDNPGGDLSLDQLADVAAMSRFHWHRVFRALTGETCAQTVRRMRLHRAATALVQS
RARVDEIAASVGYPNPVSFARAFAEAYGQSPSAFRRTNRLLPPLPPFRTGDYPMLPVEIRTEPARRLVGI
PHQGAYSAIGRSFESFSALCQTRNLWPQIAETVAIYLDSPDTVPEAELRSFAGGTWRGDDIPQGMEEHRL
PGGKTAVMTYKGPYSGLAAAYHSLFGTWLPASGEEPAESPCFEIYLNDPRTVPPEELLTEVCLPLK
>gi|56698437|ref|YP_168811.1| acetyl-CoA carboxylase carboxyltransferase subunit alpha [Ruegeria pomeroyi DSS-3]
MTQYLDFEKPLAEIEGKAEELRALARANEEMDVAEEAAALDAKAAKLLDELYRDLTPWRKCQVARHPERP
HCRDYVDALFTEYTPLAGDRNFADDLAVMGGLARFNDRPVMVIGHEKGSDTKSRIAHNFGMARPEGYRKA
VRLIEMAGRFGLPVVTLVDTAGAYPGKGAEERGQSEAIARSTEMCLRAGVPLVSVIIGEGGSGGAVAFAT
ANRVAMLEHSIYSVISPEGCASILWKNAEKMREAAEALRLTAQDLLKLGVVDRVIPEPRGGAHRDKTAAM
EAVRGAIAAMLKELDGKSAEALIKDRRKKFLDIGSKGLAA
>gi|56698438|ref|YP_168812.1| peptidoglycan-binding protein, putative [Ruegeria pomeroyi DSS-3]
MINRRFFTLGLGALSLSACGGGAPLTASTPAAAPAQSWPTVPNAGWEAWVAGFRSRASAQGINATTLDRA
FRGAGFIPKVIERDRNQTEFKRSLEDYLAIAASDERIATGRQMLQQHGALLTRIEAHYGVDKEIVTAIWG
LESRYGARRGDVPIVSALSTLAYDGRRGAFFEKQLIAALKILQNGDTSPQNMTGSWAGAMGHTQFIPTSY
LAYAVDFTGDGRRDIWSEDPTDALASTAAYLANAGWVRGQPWGGEVGSAAANSGSPSAVLQPQEPGPKIA
VFKNFSVIKRYNNSDSYAIGVGHLSDRLKGGGPFRASFGPDETGLTLEERKELQSRLTAAGYDTGGADGV
IGSKSTAAISDYQRARGLAVTGTPSVELLRQLRGG
>gi|56698439|ref|YP_168813.1| sulfonate ABC transporter, permease protein, putative [Ruegeria pomeroyi DSS-3]
MPELRVPFRGGGFRPEARRGTGIAVFLLLLFLIEWGTRTGWITNLTLPRPSDVAATLGDLARSGALWTHL
LPSLSRLAVGSALGISAGVGVGVLIGLFSYIRAGLVPLVAAIFPIPKIALLPLFVIWFGIDEGSKYALIA
LGTFTPTVVATYGAVDNVDRGLIRMGQSFGLGWWSIVRKIVLPGALPGILSGLRVSLAIGIILLVAAEML
GAEHGIGAYILQAGALYDLERLFAGVVILSCLGVLTSWAIGKIEKRLLVWRG
>gi|56698440|ref|YP_168814.1| sulfonate ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MELAVRGLTHRYGDMVVLNDVSLHIPAGEILCVVGPSGCGKSTLLRMLGGLEQPDWGEVLQGGTPPEGCL
NPLTYVFQDFALLPWRSVAGNVSLVLEDHRLPGDRVRAIIEDVLARTRLSDFHDALPRQLSGGMKQRVAI
ARALAVNPAVMLLDEPLSALDAQTRELLMEDLVGLWERQPFTGVYVTHNLAEAVRLGHRIVVLSRRPGRV
REVIEVPGALSERHAGDAGLEAIQAHLWALMRDEAVAADLELLDA
>gi|56698441|ref|YP_168815.1| sulfonate ABC transporter, periplamic sulfonate-binding protein [Ruegeria pomeroyi DSS-3]
MMNRFSRRGALGLIGGAATLPMLGTPALANTKMTVGALRFTSHAASFVAFERGYFAEEGLDVEFKFFEAA
QPMAVAIASGDADYAVTAITGGLISLAEKGAAKVIGGALSEEKGIDGQMILASNAAYDAGLTSAAALDGR
SFAVTQPGSSFHYMGAKIAAVEGASVKFTPLQKVGAIIGAMKSGQVDAWTIVPHIGKALSGGGAVKHIGM
VADYLPDYQVTTVFTSASNASGERAQTEAFLRAFSRGAADFNAALVDKTAGDEAGVEMVKLVHKYVYADQ
PFEKAEKSIRNGAMRLNKDSALNMGSVEDQLGWFKSEGMVKDSITTETLVDSSYVPMI
>gi|56698442|ref|YP_168816.1| GntR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MQPVRPPDPTTAAHDRVYRTLRTRIMHGELAPGQALTLRGIGKEFDVSMTPAREAIRRLVAEGALFLSSS
GRVSTPELNSDRIEELAALRALLEVELASRALPRAHMALIDRLQTINGTVAEMVSKRDAVGYIRTNLEFH
RTLYLRAQAPAMLAMAETVWLQLGPTMRALYGRLRRTDPPQYHKLIIAALKAGDEPGLRLAVRSDVTQGL
RLLVT
>gi|56698443|ref|YP_168817.1| hypothetical protein SPO3622 [Ruegeria pomeroyi DSS-3]
MRWRLSKPLGQRKRDMGQHHLPGQPPVPLTLRRSARARRISLRISQLDGRVTLTLPPGVPEREAIDFAQS
KADWIRGHLARHMPRHQPGFGDAIPIEGAPTRIVPASGRRIQLRPGLVEVPPQGMEARLHRFLRELARDR
LAAACDFYASELGRPYARISLRDTRSRWGSCTTEGALMFSWRLILAPPSVLRYVAAHEVAHLAEMNHSSR
FWAEVTRIHGPYVAPRQWLRDNGTQLHSYRFDSAAS
>gi|56698444|ref|YP_168818.1| hypothetical protein SPO3623 [Ruegeria pomeroyi DSS-3]
MPKEEWGVKRLCPTTGKRFYDLNKNPIVSPYTGEIVELDLGKGRMIAADAEDAATRKARQTVDDDEIVLD
DSDDDSVDMDIDDDILEDDDDEDSVSLDDIKDMSSDDE
>gi|56698445|ref|YP_168819.1| cold shock protein CspA [Ruegeria pomeroyi DSS-3]
MANGTVKWFNSQKGFGFIAPEQGSKDVFVHISALERSGIQKLDDGQAVTFDIESGRDGRESAINLALA
>gi|56698446|ref|YP_168820.1| glutamate--cysteine ligase [Ruegeria pomeroyi DSS-3]
MSIPQSGGGPIERHEQLAEYLASGCKPKSEWRIGTEHEKFGFCKDTLKPLPFEGTRSIVAVLEGLRDRHG
WAEMREGGNLIGLQKDGANISLEPGGALELSGAPLETIHETCDEVNTHLREVKDIADEIGVGFIGLGAAP
IWTHDQMPLMPKGRYKLMDAYMQKVGTMGTTMMRRTCTVQVNLDFGSEADMVQKLRVAIALQPVATALFA
NSPFFEGQPNGHKSWRARVWRDLDADRTGMVPFIFDEGFGFESWVQYALDVPMYFVYRDGTYINALGQSF
RDFLNGRLPALPGETPTLSDWADHLTTLFPEARIKKYIEMRGADGGPWRRLCALPAFWVGLTYDQSALDA
AWDLVKGWDAETRETLRIEASRQGLQARAGNVRMHDLAREVLAISEAGLKARARPGAGGLVPDETHFLNA
LKDSVESGKVPADELLDHYQGDWNGDLSRIYAQYSY
>gi|56698447|ref|YP_168821.1| hypothetical protein SPO3627 [Ruegeria pomeroyi DSS-3]
MSFIRPEARAALWRWREVLAGLAVALLGLSWIAGPGGLLGWTGWPVAAAGLALAVVGVQRARFRTGGGGP
GIVLLDEGEITYMGPLGGGSVAAAEIERLTYDPTATPPHWLLEQEGRAVLAIPVNAEGAEVLFDGFSALP
GLRTERVLAVLKGDARHAVVIWERTPSRPATLPLH
>gi|56698448|ref|YP_168822.1| acetyltransferase [Ruegeria pomeroyi DSS-3]
MVMKRVVPSDLDDVRAFLRLQPNRAMFPLSNLHRFGLDGAAPYAVSMWMSKVAGQVTGVLSVTRSGTVMP
NLPEADLDSARDILRETDISGIIGPADIARPLADRLGLSGRSATLDRDEPHFTLDLKDLQCPDGPATLHP
LGTADPEEMIRWRVAYCREALHMSPEQAQRQGEVDHDTYIAADSHRVLMQGGKALAMTGFNASLPDIVQV
GGVFTPPELRGQGHARRALALHLIEARARGVTEATLFSASDAAAGAYRGIGFRQIGLWTLLLFETPQRIT
P
>gi|56698449|ref|YP_168823.1| 16S ribosomal RNA methyltransferase RsmE [Ruegeria pomeroyi DSS-3]
MSAKIRLYVEQALGQGQPVQVSRDQAHYLFGVMRLGVGDWVALFNGRDGEWQARVGEAGKRGGELLCESQ
SAPLRMPPDLWLLFAPIKKARTDFIVEKAAEMGAARIVPVQTEFTNSERIRQDRLQAHAVEAAEQCGGTY
VPEVAELQKLGPLLDRWPAERQLMFCDETLAGRSSALSGLLAGQGENARTGGPSGPWAILIGPEGGFSER
ERARLAALPNAHAVSLGPRILRADTAAVAALTLWQQALGDW
>gi|56698450|ref|YP_168824.1| 4-hydroxybenzoate polyprenyltransferase [Ruegeria pomeroyi DSS-3]
MQGQAPTPDGQVADAVTGNWVDIHAPAWSRPYLRLSRADRPIGTWLLLIPCWWGLALAMLDGQDARWGDL
WIALGCAIGAFLMRGAGCTWNDITDREFDGRVERTRSRPIPSGQVSVRMAVVWMIAQALLALMILLTFNR
MAIAMGVLSLLPVAVYPFAKRFTWWPQVFLGLAFNWGALLAWTAHSGSLGWGALFLYLAGIAWTLFYDTI
YAHQDTEDDALIGVKSTARLFGAQTPRWMSYFLVATVSLMGIAVFEAALPDASILALVLALAGPWAMGWH
MAWQLRGLDLDDNGKLLQLFRVNRDTGLIPLIFFVIALFA
>gi|56698451|ref|YP_168825.1| OmpA domain-containing protein [Ruegeria pomeroyi DSS-3]
MRLPLTLVVALTFVLAALICGVAASFAVTAVEENSEIAVRRGLDRAGHNWAEVQANGLQVIVTGMAPDEA
TRFNALSVVGGEVDASRVIDLMQVRPSAGLAAPKFSIEILRNDSGVSIIGLVPASMNRQALLTSLKRLAD
GQQVADLLETASYPVPEGWQDAMDYAVVALGMLPRSKISVSAGRVTVRAISDSGADKKRLEQALNRAAPP
SLRIGLDIAAPRPVLTPFTLRFLIDQDGARFDACAADTEAARDRILSAARAAGMQESASCTIGMGVPSPR
WAKAAELSLAALAELGQGTVTIADADITLVVAQGTDPALFDRVVGELETGLPDVFALHAVLPEPETKQTA
GPPEFTATLSPEGLVQLRGRLGSDHAREMVDSYAKAAFGSTAVYTAARIVPDLPADWPVRVLAGLEALAT
LRNGALVVSPDRVMLRGTSHVEEASAEIARLLADKLGENQSFDLEIAYEAPPEPAETSLDADRCEALLAE
VQANDKIAFEPGSATIAASASGTMDRIADLLQSCGPIRLEIQGHTDSQGREEMNQQLSQARAQSVLNELR
ARRVLTASYAAVGYGESQPIADNGTEDGREANRRIEFRLIRPEQADEHTTALEQVEAEQSGDADTEQSTT
GTTGEDQ
>gi|56698452|ref|YP_168826.1| hypothetical protein SPO3632 [Ruegeria pomeroyi DSS-3]
MNRTEFIITTAIILFVAFSMGWFANWLVHRFTRVRQSDVADLDRMSQELHEAEEARDQAITYLQQREAEL
TNQLTQTEAELGAAMDGLRAARQEAEELRHHHG
>gi|56698453|ref|YP_168827.1| molybdopterin converting factor, subunit 2 [Ruegeria pomeroyi DSS-3]
MRVVVQQEPFDLGAEANAFAAADTGMGAIVTFTGVVRDLAQGDLDVMEIEHYPGMTEKALARIAAEAQER
WSLGDVLVIHRYGRLAPGDRIMMVATAAPHRKDAFEAAEYLMDYLKSRAPFWKKEITGTGAGWVAAKDED
EDALTRW
>gi|56698454|ref|YP_168828.1| molybdopterin converting factor, subunit 1 [Ruegeria pomeroyi DSS-3]
MDVLYFAWVRERIGIPRERIETGAETVAQLVEELRAREPRYEAAFADLSALRVALDQDLADFDASLSGVR
EVAFFPPMTGG
>gi|56698455|ref|YP_168829.1| CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [Ruegeria pomeroyi DSS-3]
MKWNLPNILTLLRLLAAPGLAVMFLYFTRPYADWFALILFVSAAITDWFDGYLARAWKQETKMGAMLDPI
ADKAMVVIALMILVGYSTEHWTPWLVLPATVILFREVFVSGLREFLGDVAGTLKVTKLAKWKTTAQMIAI
AVLFSQGIFEHYLVMSSFGMDQGIVDQIMAGEVADLQGLRWKLDGMIWSGRVGLWLLWIAAGLTLITGYD
YLRKSMPHLKETR
>gi|56698456|ref|YP_168830.1| beta-lactamase, putative [Ruegeria pomeroyi DSS-3]
MTVMQGFPPAEADRATLANWRTRPYSAWAFHHVREIVPSAPIANAPGDVWRLEQGAPLLSDELLGDILAP
TCTDALVVLHQGRVVHEVYRNGMGAEDPHILMSVSKSMLGLLAGILADKGLLDLTAEITDYIPELAATAY
AGATVRQALDMRVGVEFCEDYTATTGPIIAYRKAANWNVVEPGDTVPDLRGFQQTLTAHDGPHGGRFHYV
SPVTDLLAWVIERAAGRRYADLMSEHLWRPMGAEQPAYITVDRIGGPRAAGGMCVTARDLARVGQLICRG
GARADGRQVIPARWLDDITTQGDHEAWATGDFAERFPDYDMVYRSKWYIHRGAKPLIHGMGIHGQFVFAD
PARDLVVAWMASEADPTSDGAFGLRYRLIEQLRAAV
>gi|56698457|ref|YP_168831.1| excinuclease ABC subunit C [Ruegeria pomeroyi DSS-3]
MQDTNPSQPDSPITGYACIQDYLRNLSGAPGVYRMLDAQARVLYVGKARNLKARVSNYARPGHSPRIERM
IRETASMMFLTTRTETEALLLEQNLIKQLKPKYNVLLRDDKSFPNILVAKDHSFAQIKKHRGAKKEKGTY
FGPFASAGAVNRTLNQLQKAFLLRNCTDAVFESRTRPCLLYQIKRCSAPCVGLISDQDYAAAVKDAERFL
SGRSTRVQEELAEQMMAASEAMEFERAAALRDRIRALTTVQGTQGINPRGVAEADVVALHLENGQACVQV
FFIRANQNWGNRDFYPRVGEDVSAAEVMEAFLGQFYDNKEPPRQLILSDAIENADLMTEALSEKAGRKVE
LLVPQRGEKAELVSGALRNARESLARRMSESATQTKLLGGLAEAFDLDGPPQRIEVYDNSHIQGTNAVGG
MIVAGPEGFLKNQYRKFNIRGDDLTPGDDFGMMKEVLTRRFTRLLKEDPDRDKGLWPDLLLIDGGAGQVS
AVHEIMMAHGVQDIPMVGVAKGIDRDHGKEEFHRTGQRPFALKRNDPVLYFIQRLRDEAHRFAIGTHRAK
RAKAVSATPLDDIPGVGAARKRALLAHFGSAKAVSRADLADLTAVEGVSAGLAQKIYDFFHES
>gi|56698458|ref|YP_168832.1| short chain dehydrogenase [Ruegeria pomeroyi DSS-3]
MALALVTGAGIRLGRAMALYLAGRGHDVAVHYARSEADAANVVERIHRLGRRAVALQADLLDEGQMQALL
PRACEALGEPVTCLVNNASIFEYDSLSSASRQSWDRHMESNLRAPFVLTQAMAAQGLEPVQDDNGEPVAT
GLIVNMIDMRVRKLTPEFMTYTLAKAGLWTLTQTSAQALTPAIRVNAIGPGPTLQGHRQSPEHFANQRAR
TISGRGANPQDITAALGYFLDAPAVTGQLLCVDGGQHLGWRTPDVLGVE
>gi|56698459|ref|YP_168833.1| K+-dependent Na+/Ca+ exchanger related-protein [Ruegeria pomeroyi DSS-3]
MMPWILSALGLVILLLAGDALVRGAVNLSLRLGVPALIVSLTIVAFGTSAPELLISIKAVLEHAPGIALG
NVVGSNTANILLVLGVPALLATLHTSECNTRRNYVLMILASVLFIGLAFCGTFTATSGLILLAGLGLILA
NAFREAHAHRKACGDPCADDDLEALEEADPDMPWWRIGIYLLLGLIGLPMGAHLLVENASIIARTYGVSE
TVIGLTLVAVGTSLPELATTVMAALRRQADVALGNVIGSNMFNLLAIIGVATMFGPIPVDPEFLRFDLWV
MLAASLLLIPFVFFKWDITRTWGVFLTGIYLVYIVVVLI
>gi|56698460|ref|YP_168834.1| S49 family peptidase [Ruegeria pomeroyi DSS-3]
MPRVLFVGRARSTSAAMTLALPFKKKPPLVAVVRLSGAIGLAGRGALNDTTLAPMLERAFRKGKPAAVAL
EINSPGGSPVQSSLIGARIRRLAAEHKVPVYAFVEDVAASGGYWLACAADEIWADDSSVLGSIGVISASF
GAHVFLARQGFERRVHTAGKSKSMLDPFSPEKKEDVTRLKGLLGDIHQNFISHVKERRGDRLDATEDLFT
GEVWLGARARDLGLIDGIAHLKPKMQERFGDKVRFRRYGVRRPFWSRFGVHLAEDALAGIEERAAFARFG
L
>gi|56698461|ref|YP_168835.1| ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MNWAAIAAIYRFEMARFFRTLAQSFISPVLSTSLYFVVFGTAIGSRIQEIEGVSYGAFIVPGLIMLSVVM
LSISNASFGIYFPKFLGTVYELLSAPVNFIEIVIGYVGAAATKALFVGLVILATASFFVDLRIEHPFAMA
AFLVLTCLSFSLLGFIVGIWASNFEQMSLVPQLVVTPLIFLGGTFYSISMLPPAWQTVTLFNPVVYLISG
FRWSFYGLADVPVGLSLLAIAGFTGLCLAVIWWIFRTGWRIRS
>gi|56698462|ref|YP_168836.1| ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MTTILSIRDLRKSYADGFEALKGVSLDIREGEILALLGPNGAGKTTLISTVCGITTPTSGSVTVGGHDIQ
SDYRAARRMIGLVPQEIALEPFEKVMNTVRFSRGLFGKRANDGRIEEVLRKLSLWDKRRNAIKELSGGMK
RRVLIAKALAHDPRVLFLDEPTAGVDVELRKDMWEIVAELKAAGVTIILTTHYIEEAEAIADRIGVINKG
ELLLVEDKAKLMARMGRKQLDVLLTRPIAEIPASLARHNLSLGAAGDVLIYSYDTHADRTGITALLNDVA
QAGLVLRDVVTRQSSLEEIFVTLVKGETQ
>gi|56698722|ref|YP_168837.1| carbon monoxide dehydrogenase G protein, putative [Ruegeria pomeroyi DSS-3]
MQMQDTRAIPADPATVYAALLDPAVLCACVPGAQEVTGTANDGFEAVVVQKVGPVKATFRGTVTLSDLVP
GAGLTLAGEGKGGAAGFAKGGAEVRLAPDDAGGTLLSYRAEARVGGKLAQLGSRIIDGFARKMADQFFDN
LQAQFTVQAEEDPQGAEEAAPPRKTWFGRG
>gi|56698463|ref|YP_168838.1| integral membrane protein [Ruegeria pomeroyi DSS-3]
MTDTAHHRPGAGIAFIMAGMLAISLNDMLVKQLSGSYPLHQIVFTRSAVGIVLSLGLVWAEGGWRILKTK
HPFLHALRGLLVVISNMSFFAALAVAPLADVTALFFAAPLFITLLSVPILKERVGPLRLGAVLVGFSGVI
LMQRPWQGAESLEASRLVLLLPVLSALTYALLQLMTRKLGVTSKASALSVYIQLMFILVGALFYLVAGDG
RFVDESSDPSLIFLLRAWTWPSGQDWLFLTGLGLNSAIIGYCLAQAYRQADAATVAPFEYVGLPLAVFWG
WMIWGDLPDWEVWAGMTLIAGSGLFVFLRERAKARVVARSEVKGRY
>gi|56698464|ref|YP_168839.1| hypothetical protein SPO3644 [Ruegeria pomeroyi DSS-3]
MGESGMSIADPSGPLDQPTQAEPLTIRLTRAAAAIASRGAPDLSAGLLERIFTTPRRYSVPARERDWMVG
ARTDHLELAGGLRIPLYRWGSGPTVLLIHGMSGRGSQMAGFTAPLVAAGFSVVAFDAPGHGAAPGRRFSL
PEYAQVVLQIAAHLGPLAGAVAHSVGAAAATVAMGAGAEIDRLVYFAPLEDMADQLLRLARFLGFSTRVA
GRTQHRLETRLGVPMEALRGRDIARTMTRRLLVFHDRYDRMVPFSDGATLVRHWPGARLITTEGLGHARI
LRDPDALERTVRFFAGPMSGHESS
>gi|56698465|ref|YP_168840.1| transcriptional regulator, putative [Ruegeria pomeroyi DSS-3]
MKWSDLDHDSCPVARAMSVVGDRWTLLILREAFLGTRRFDGFQDRLGITRHLLAERLKKLEALGLMHRTP
YQERPLRHDYRLTPAGRAFGPVMLMLVDWATENLPSDLPPPVRVVSQADGHEVDPVVVDRATGTPLTYET
MRLRRT
>gi|56698466|ref|YP_168841.1| enoyl-CoA hydratase [Ruegeria pomeroyi DSS-3]
MTWRCILSTLPCMLCWGAVREEDMSVVAYEKDGRIARITLNRPEVMNAINDELPGALAAAVAQADADPGV
HVMVLSGAGRAFCAGYDLTYYAEGNGAGEVTQPMPWDPIKDYRFMWANTQHFMSLWRAAKPVVCKVHGFA
VAGGSDIALCADMTIMAEDAQIGYMPSRVWGCPTTAMWVYRLGAERAKRMLFTGDKITGRQAADMGLVLE
AVPAEHLDDRVEELAARMATVPINQLAMQKLVINQAIEQTGLMQTQRLATIFDGITRHSPEGIHFKERAE
AVGWKQAVDERDQGTWDWTANAEIPKGNR
>gi|56698467|ref|YP_168842.1| CAIB/BAIF family protein [Ruegeria pomeroyi DSS-3]
MLNGTRIIEIEGLGPGPFAAMLLADLGADVITVHRKGGAVTPGMPERSLLDRGKRSIALDLKDAADIATA
RALIASADALIEGFRPGVMEKLGLGPADCHALNPALVYGRMTGWGQDGPLSHAAGHDLNYISLSGALWYG
SAPGDAPQTPATLVGDIGGGAMYLVTGLLAGLLNARATGQGTVVDAAIYDGSAHMMNLLMSLGQTGSLSE
TRGHSLLDGPHWSRTYACADGGHVTVQCLEPKFYALFLDRLGLSDDPEFQQQFAPKLWPTLTTRLAALFA
TQPRDHWADLFLGTDACVAPVLSPHEAQHHPMNAARRTWCEIDGALQAAPAPRFAGRDWRPKPSPARGEN
TAEILAELAKAAKP
>gi|56698468|ref|YP_168843.1| uroporphyrinogen decarboxylase [Ruegeria pomeroyi DSS-3]
MAETKKLLRVLAGEVLDTPPIWMMRQAGRYLPEYRATRAQAGDFLSLCYNPELAAEVTLQPIRRYGFDAA
ILFADILLVPQALGADLWFETGEGPRLSTIGAQADFDRLKPVDAIHETLSPIYETVRILTRELPSETALI
GFAGAPWTVATYMIAGRGTPDQGPAHALREGNPALFDALIARLTAATIEYLSAQIEAGAEVVKIFDSWAG
SLKGEAFTKYALEPCREITQALKARHPGIPVIGFPREAGQGYVGFAKATGVDCVALDNSVTPDWAAAHVQ
VDGCVQGNLASSHMVTGGQALVDETRRIVEAFSKGPHIFNLGHGITPDADPENVQLMIDTVRKG
>gi|56698469|ref|YP_168844.1| porphobilinogen deaminase [Ruegeria pomeroyi DSS-3]
MKIALPSPASPLKIGTRGSPLALAQAYETRHRLGAAFDLPEDAFEIVVISTTGDNRAMIEADRPLKEIGN
KGLFTKEIEEAMLRGDIDIAVHSTKDMPVEQPAGLVLDTFLPREDVRDAFISPGHSAIRDLPLGAVVGTS
SLRRKAQLLNRRPDLKVVEFRGNVQTRLRKLSEGVAECTFLAMAGIRRLNMAEVPATAISPDDMLPAIAQ
GAIGIERRMDDTRAAEMLTAIHHGETGQRLAAERALLAALDGSCETPIAGLAELDGTTLRLRGEVLRPDG
SEAITLDRSGDVADGPALGTEMARELLAQAGPGFFDWRG
>gi|56698470|ref|YP_168845.1| adenylate/guanylate cyclase [Ruegeria pomeroyi DSS-3]
MERRLTTILAADLSGYSRLMAADEEGTVTRLRHLFADIVRPDLSREGGRLIKTMGDGMLVEFASPVAALR
SAVAILQQVARDQVETAPDTRMLFRVGIHLGDVISDGDDILGDAVNIAARLESLATPGGICISRSVHDQV
RGKVDAELIELGPQPVKNIPDPVEVWRVGAEGIACAAEKPAVRAELPAVVILPFDNMSADPEQDFLADGI
VEDVTTELSRFRTLTVIARNSAFAYKGSHKDVRQIAEELGVRYVVEGSVRRAGDRLRATAQLIDARTGAH
VWADRWDRTMADLFDLQDELTAAILSGVEPELGAHERNLARRKPTDSLTAWEMCQKGYSEFTRYTDEGYS
QAHAYYTRAIAADPDFALPHALLARLAWVKVITGRTRDPAAEISTGLDHAAQAIERDDRLEIGYVALGVL
LAITGREQDAADALDKAEALNPNNAVLHFGRCHACLFMQRLDCDRLERAARTALRLNPKDPMAWGFWFQL
GNAFTFRDIDAAEPEALAAYETACRFANADYFVFMATALKHAKLGNRDKAAHYLAQARERYPALTAEFWR
RAFRFPIWSRWVAADEPNIQLLIDLGLPQK
>gi|56698471|ref|YP_168846.1| fatty acid desaturase family protein [Ruegeria pomeroyi DSS-3]
MTPGKAYLGTEEIRPLAERSDAMGLWLVAHCWGTIALAVALFGLWPNPLTFALAVVVIGSRQLGLAILMH
EAAHNALFRNRRLNDIVGEWLCGRPILAELAAYRHYHLTHHRFTQTDKDPDLVLSSKFPTSHASMQRKFA
RDLTGRTGIKQLIGQIMMSFRLAGDDEAIKAAASDFAQSFKAPQLWKSLPVFVGIALLISLAGDWWWGLA
FWILPYLTWFQFVLRIRNIAEHGATEQSEDPFQNVRTTYAGPIARLLVAPYWVNYHLEHHMIMHVPCYNL
PRMHALLLDKGLGGRMKTAPSYGAALREAGWRSA
>gi|56698472|ref|YP_168847.1| hypothetical protein SPO3652 [Ruegeria pomeroyi DSS-3]
MAQRLTARPRPRPRARIGARCESLYPARANPLSRRSNIMTRRRTGWTLVTAALLLPGMAMGFQAFNRFEV
YPVSKGVFEVVNRHGSAPKDFWCGAGDYAIRVLRTSATQRIYLVRPVGPAATVKGRKGVQFSLQPPEGAD
TTPGYSVSVKKVGDNMNASLAQNYCYDRLTDDFWLRP
>gi|56698473|ref|YP_168848.1| coproporphyrinogen III oxidase [Ruegeria pomeroyi DSS-3]
MFETEKSTASAWFRDLRDQIVAAFEGLEDSHAEGPFSEMAPGRFEVTETTRQSDDGSDAGGGLMSVMRGG
RVFEKVGVNISTVYGTLGERAQAAMAARKGIPGMADDPRFWASGISLVAHMQNPHVPAVHMNTRMFWTPH
AWWFGGGSDLNPCIEYAEDTAHFHATQRAHLDPHGSEHYPRLKAWADEYFYIPHRKRARGVGGIFMDDLC
TGDWQADFALTQDIGRAFLPAYLSLVERRRVQPFDEAEKEAQLVHRGLYAEYNLVYDRGTKFGLETGHDA
NAVLMSLPPLAKWI
>gi|56698474|ref|YP_168849.1| 7-alpha-hydroxysteroid dehydrogenase, putative [Ruegeria pomeroyi DSS-3]
MSFSIAGKTAIVTGAANGIGLAIARQFASAGANVMFADMDEKGLEEQLGDLAEDGNIRYFAGDLRERLTV
ANLLSATIDAFDQIDILVNGARQVIPTDPLDTEDDSVRVALNQNLFPAYRLSQAVAKRMIKQAGENGEGQ
AGAIINLTSVAARRTHPDLLAYSVSTAALDQMTRAMAVALAPQRIRVNAIAIGSVMSASLQAALKDNREF
RQDIERHTPLGRVAAANELVLTAQYLASDASSFMTGQILTVDGGRTLLDPVAAPAH
>gi|56698475|ref|YP_168850.1| methyltransferase, putative [Ruegeria pomeroyi DSS-3]
MSSRLELALASGLDLSAPLSVLGPTPDHDLSALPPDTEVVQPYRPWHDHFAARGFHTVAQSDAPCADAVV
ILPRAKAQARAMVAEACRRASGRVVVDGAKTDGVDSLLKDIRKRVAVEGPLSKAHGKIFWFHAEAADFSD
WVPPADQQVAGFRTAPGVFSADGVDPASALLLEALPQKPGKVIADLGAGWGYLSAGILSREGVRALHLVE
ADHAALDCARANIDDPRASFHWADVLSWQAPERLDCVVMNPPFHTGRAAEPALGQGFITAAARNLTGSGQ
LWMVANRHLPYEAALNERFQQVAEVAGDNRFKVFHASRPRR
>gi|56698476|ref|YP_168851.1| ATP-dependent Clp protease, adaptor protein ClpS [Ruegeria pomeroyi DSS-3]
MTAQLHMMSDKHDQDNDASVLLQTRPRTKRPPLYKVLLLNDDYTPMEFVVHVLERFFGMNHAQAFEIMLT
VHKKGVAVVGVFSHEIAETKVSLVMDFARRHQHPLQCTMEKED
>gi|56698477|ref|YP_168852.1| HAD superfamily hydrolase [Ruegeria pomeroyi DSS-3]
MEKRKQTRQMVQNLTTVGFDADDTLWHNERFFQMTQDHFAGLLADFAEADHLMERLLAAERRNIRHYGYG
VKGFTLSMIETAIEVTEDRVPAAVIRQLIEAGQEMLAHPIELLPHARAAVEAVAQTHRVLLITKGDLIDQ
ERKLAQSGLGDLFHGVEIVSEKTAQTYETVFERHGEGAGRAMMVGNSMRSDVLAPILAGAWGVYVPHGLE
WEIEKADPPEDRTRFHSLPDLGALADLVGQLG
>gi|56698478|ref|YP_168853.1| D-alanyl-D-alanine carboxypeptidase family protein [Ruegeria pomeroyi DSS-3]
MIVQVRQKMPARLGLILFFAIWMIAALSGVARAAPYAAMVIDARTGEVLHATNADTRLHPASLTKMMTLY
IAFEAVRNGELTMDTQVRIDPFAAKEPPSKLGLRAGQKIAFRYLVRAAAVKSANDAATSIGIAISGSEAA
FARRMNRTAKALGMTRTTFKNAHGLTESGHLSTARDMTTLGRHLLYDYPQYYNLFSRRETSAGIKTVANT
NRRLLDAYQGADGIKTGYTQAAGFNLVASAKRGDERVIATVFGGKSSTARNAKVAELLDLGFRKAPSRAP
IRRPDMPLYAGEVGESSKTVRVAGAPTSSLRPNQRPGGAIATVVAQAVAETARQDEDRIQAGINAAMAQA
DIVAQTTDTPDPGLRPSMRPENLILAASQPDEVEPEPEREVVTRLSTSGGHLWGINIGRYPNRYDAEKVL
LRTALAEVSTLDGSLRKVHQSSKGFEATFQGMTRDQADRACRRLQARNVTCFMIGPS
>gi|56698479|ref|YP_168854.1| LamB/YcsF family protein [Ruegeria pomeroyi DSS-3]
MTRVDLNADMGESFGPWKMGDDDSLLKIITSANIACGFHAGDPDVMAKTMALAAENGVGIGAHPGFPDLQ
GFGRRNMKVPHDSLRNLVRYQLGAALGMARAVGTQVRHLKLHGALANMCSVDQDMARACYQGALDVDPDI
IIMVLAVTKQEQAVRELGCKWVGEIFADRAYNDDGTLVDRALPGAVIHDPDLAGPRMLKMVRAGAIITES
GKHLETSVDTICLHGDGPTAVQIARSVRACLEEGGVSVTAFER
>gi|56698480|ref|YP_168855.1| urea amidolyase,-like protein [Ruegeria pomeroyi DSS-3]
MSLIVHRIGPACTIQDQGREGYLDQGLSRSGAADLRALYEGAALLRQKPDLAALEMAGMGGEFEATAPLR
IALTGAPMQASIDGSPVAWNASHALAKGQRLSIGAVLRGGYGYLHLGGGIASEPFLGSRSAHLAARVGRA
VAVGDTLENGPDKGEAGMKIAAEDRFGGGALRVVASFQTALFDGETLARFEATEFRRGPRANRMGMQLDS
DGPGFAAKGQLNILSEVISPGDIQMTGTGNPFILLPECQTTGGYPRIATVLPCDLPRAAQTPPGGAVRFH
FVSLEEAVAVHAAWLKDLARLSSRVEPLVRDPHDIPDLLSYQLISGVVSATD
>gi|56698481|ref|YP_168856.1| allophanate hydrolase family protein [Ruegeria pomeroyi DSS-3]
MTRSDPFPLIRSVGLDGMLVTFADTMTERSNRAALAFRGALHEAGWEGVVESSTSLASAYLRFDPLCLSH
AEVQARLAALLAERDWYAAPLPSGRKLWRVPTVYGTDLAPQLEDAAAAAGLDVDEAVRRLGQSRVRVLTI
GFAPGQPYLGPLAPEFDIPRLQQLTPMVPEGALVCAIRQLIVFAGPTPTGWRHIGQTAFRCFRPGMEPTF
ALNPGDEMVFEPIERVELDHIRAHNEDGTGGAKVEEIAA
>gi|56698482|ref|YP_168857.1| hypothetical protein SPO3662 [Ruegeria pomeroyi DSS-3]
MQQALAFVARHGRLGLMVGLGAGLALPGLAAVMRPWIPQLVALLLFLTAFRIGPVDAAGSLADLTRTARR
VLVLQLALPILFLLGLRLLGLPVTPLALVLALVLAAPSVTGSANFTILLAQDPAPALRLLILGTALLPLT
AIPVFWLLPAFGDPAEVFGAALRLLGVILLAAGCGFALRHWGARQLSDLNRRAMDGLTVIALAVIVIALM
SAVRPAMTERPAELAFWLLAAFAINLGGQTLCYLTLRATGGADPVPTSIVAGNRNFALFFVALPSEVTEP
LLIFLGCYQFPMYLTPTLMRRLYDPV
>gi|56698483|ref|YP_168858.1| TRAP dicarboxylate family transporter DctM subunit [Ruegeria pomeroyi DSS-3]
MENLSVIILFLFVLFTLLGTGVWVGLALMGVAWVGMELFTTRPVGDVMLTTIWSASSSWTLTALPMFIWM
GEILYRTRLSEDMFKGLSPWMAPLPGGLVHTNIVGCTVFAAVSGSSAATLTTVGKMSIPELRKRKYPERM
IIGTLAGAATLGLMIPPSLTLIVYGVTINESITKLFFAGILPGLVLAAMFMGYVAIYSRLGKDWSPNPEP
KLSFADKIRNSRFLAPVITLILVVIGSMYLGYATATEAAAFGVIGSLLLALGQGSLSWKTFAESLMGATR
TSAMIALILAGAAFLSLSMGFTGLPRGLANLIAAWDLSRFELLMVLLVFYVILGCFLDGISSVVLTMAVV
EPMIRDAGIDLIWFGIFIVVVVEMAQITPPIGFNLFVLQGMTDHEMSYIARAAIPMFLIMVLMVFVLILF
PDLATWLPDNLRAGPGQ
>gi|56698484|ref|YP_168859.1| hypothetical protein SPO3664 [Ruegeria pomeroyi DSS-3]
MALLRGLRSGLDLLYLIAGVLAAMCLVAILGLIVVQMLARWTGEVFPGAPDYAGYAMAAASFLAFANALN
RGSHIRVSILLNAVPDGLRRWIEVWCFGIGTAVMWYFVWYAYRFVYWSWKFNDISQGQDRTPLWIPQSAM
LLGAVILAIALTDHLIHVIFKGDHRITRDLADQSHGE
>gi|56698485|ref|YP_168860.1| solute-binding family 7 protein [Ruegeria pomeroyi DSS-3]
MKKLTTLLAATALTSVAALSATAETWDMPLAYSGSNFHSVTAAEFGNCVTTGTGGEIEIVTHPSGSLFKG
ADIKRAVQTGQAPIGERLLSGHQNENALFGFDSVPFLATSFDDADKLWKAAKEPLSALLAEQNLTLLYSV
PWPPQGLYFKNEVNAVADMKGIKFRSYNNATSRLAELTGMLPVTIEAAEISQAFATGVADSMISSGSTGY
DRKVWESLNYFYEVDAWLPRNYVFVNSDVWSGVSDQNKNVIQACAGLAEYAGNWRSKEYTGFTLQGLRDG
GMTVGPASDQLVGELKEIGVTMTSEWLEAAGDQGKAIVDAFKAD
>gi|56698486|ref|YP_168861.1| oxidoreductase, FAD-binding [Ruegeria pomeroyi DSS-3]
MTDTAKTIAIIGAGIVGVSTAIWLQRDGHQVVLIDRAGPAEGTSYGNGGVLASCSIVPVTTPGLIAKAPR
MLFSPNEPLFLRWGYLPRLAPWLLRYLRRANARDATQTAAAMAPIVGDSLADHLALAQGTGAEKWVVPSD
YLFIYNDRAHFQGDAFGWNLRRQNGFVWDEMEAEEFRGYDPIFSSDLRFAVRLKDHGRITDPGQYVKDLA
AHVVASGGQLIQADVEDIARENGRVTGVRAGGRTIPCDAAVIATGVWSGPLARKLGLEVPLEAERGYHIE
FWNPNFMPKSPVMVAARKFVATPMEGRLRLAGVVEFGGLDAGPSRAPIELLKRSAAAVFPGLKADEVTEW
LGHRPAPADSIPVIGELPHLKGAFTGFGHHHVGLTGGPKTGRILAQLIAGRQPNIDLSVYSPARYTKAGQ
N
>gi|56698487|ref|YP_168862.1| muconate cycloisomerase I [Ruegeria pomeroyi DSS-3]
MMGDLEQKIIAMDLWHLALPVVSARDHGIGRVEGSCEIVVLRLVAEGGAEGFGEASPWAVFTGTPEASYA
ALDRYLRPLVIGRRVGDRVAIMDEAARAVAHCTEAKAALDSALLDLAGRISNLPVWALLGGKCRDTIPLS
CSIANPDFDADIALMERLRADGVGLIKLKTGFRDHAFDIMRLELIARDFPEFRVRVDYNQGLEIDEAVPR
VLDVAQFQPDFIEQPVRAHHFELMARLRGLTDVPLLADESVYGPEDMVRAAHEGICDGVSIKIMKSGGLT
RAQTVARIAAAHGLMAYGGDMFEAGLAHLAGTHMIAATPEITLGCEFYQASYFLNEDILETPFRVEAGQV
IVPDGPGLGARADPEKLEHYAVRRSG
>gi|56698488|ref|YP_168863.1| LysR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MSRFFRHYQAFHAIIETGTVTGAAERLGVSQPAISNLLAQLERRTRLKLFERNRGRLLPTPEAMVLFDEI
DTVIRGLGQVSQAVVDLQNQKAGQLQVATNHAMAFGFMPEQIARFAADKPNLTVAFQSQYSAKIQDWVMA
GLFEIGICEQPVRTDGLDWVPFFFEIQCAVPADSPLARHEELTPILLDDVPFIVMGADHMVTRRAREAFH
REGANLRIRCQTDLFRNALNLVKQGLGVTLVDPFTLSSDDRSGYVLRRFAPRILLDVIIVTARGRPISAI
GAQFLEQVSASMTTLATAAPDPAEP
>gi|56698723|ref|YP_168864.1| transglycosylase domain-containing protein [Ruegeria pomeroyi DSS-3]
MRLPTPLLLAIFIVVNSTTVATGQNTDPELPRPDQISEYYQASAASWPAIPHIALLAIVAAEDRRFFERP
LQHSTITKQIGQWYPQPGIEKHQRVVLSFAVGEVLSHDEVLNWYANEVFLGQACFGLSNASMVYFGKSAA
DLNLEEIAYLAALPKAPSLFHPVRSRDRAIERRDFILMEMRNAGFISGDETDRAMQTALNVHDPLVRCEP
LE
>gi|56698489|ref|YP_168865.1| hypothetical protein SPO3670 [Ruegeria pomeroyi DSS-3]
MHVQGRLHGAVSFVAGYETGVSHFHQYEISAFNGSVA
>gi|56698490|ref|YP_168866.1| muticopper oxidase domain-containing protein [Ruegeria pomeroyi DSS-3]
MQRREFLRSLGATTAIAAGVQNLGVSMAMARTGEPLRDLPELRSQNGHVKTKLIIENGKFQVGDRVLTVP
AYRFEHMDTGSLPGPTLRIRPGDHVEWDLVNKMTPTGIPDGASDEQKNMFQQLEYTNVHVHGMQVSPKPG
ADNVYQVLRPFCPPEPYSYHVPGPDTGLPQPAGMFWYHPHKHGSTAHQAWEGLSGAIIVEGDIDEVPEIK
NIRERVIVLNGLLVNPAGEVPRAAIVPNAGFSPFSPIPSQPTDIILTMNGQLRPVIDIRPGEVQRWRFLN
AAPHRFFWLNLDGHDFYQIGQDGIPFAAPRPVKRILMAPGNRAEFLVKGGEVGRYDLHADQYEQGHPGGA
RPGWVIGTMEVNGTIRDDPLPSKLVEPPKMPDLPIANRREIRFKGEISGNEEKGEYVGSHDHSGGMRPPV
QFYLDGKIFELNRIDQKVLAGTVEEWTLINEDVFQHPFHIHVNPFQVIDINGQPTYDDSWWDVIALPSKG
RLTVRMYFRPDVDGKTVYHCHILPHEDNGMMANLYIFPPGTDMNNPPAIPDTPEPTGMGPCKV
>gi|56698491|ref|YP_168867.1| hypothetical protein SPO3672 [Ruegeria pomeroyi DSS-3]
MRQYLKSAFAAATAALIAQVAAAETKYQPWQQDGVAKRPYIFTQQHNVGKETDDEAGGQLIRLGYPLQVQ
LPGNPALWTFQPDASLNVEYLGRTMVYSPNRIEGTESIQVFDLALTPDAASGTQGYFTFTTEELPPSLDK
VVPGGIYVVHFEVIEPSK
>gi|56698492|ref|YP_168868.1| type I secretion target repeat-containing protein [Ruegeria pomeroyi DSS-3]
MANEFNLTKYRDIDNFDDLVEYHRGLRASNDYLNSNSFADITIDLAINIGRILTGREPLLDPTPPHHSQS
IEFAQGVSNTAIAAGIATLGAKAGAFGTISWGAEAVVAAINSGAGDHATAYANSLDVLDAAQKGHVSLDQ
EAYDFLAKELAKATFPDKVSIVEDKLEIAAEKLGLNSTTLSDAINNCFVAGTNIYMWPSDPSLQPNEYGA
YDTETVHKKVWKKRIENISSGDIVVSYDTEGNLKPGKVKQTFQNHTTDLIRLRRGDEYDDLFTTPGHLFL
GESGNFFRIGDQLQFVGEEVSLVDFHGNIVTAKRSKVHPGEIENSPPKDDSITQVGWRTYNFEVEDFHTY
IADGNRVHNDSFYSVKDVPANRTVSEVIGTLGKVIGYRDVLDGNNNPVNAGSVDEEGNTVSSPGAGGHVG
HDGSPSAWGGGEQPVILDLNNDGVEISFDQKISFDWDQDGYRERTSWVSADDGFLVIDLNADGSRGSGDG
QIDQARELAFTLWGNEDDTDLQGLRRAFDDNNDGVLNTSDSVWNELRIWQDLDQDGETDNGELRSLADWG
ITQINLGYDDGSDYDHTDDDITVYGNTLHGLASYTRNGEAIEGGVGDVSLAASEQGWRRVETSSGFTVEL
ENGETYQYQKLDETGPDDIDLVSAWLDGAEGNDNANLLDASGHTRSVSVNGGAGADTVLGGQADDILIGG
EGSDSLDGGAGNDLVIFDADDVAIRGGDGFDSALYSGTSSITFDLAANGFERASGGDASDTLIAEYTSTS
VWLYGRAGQDLLRGGGADDLLSGGEGNDTLYAQVGDDLVIGGIGQDQLHGEDGDDYLLGGDGHDNLDGGN
GDDQLFGGDNEDTLWGRDGDDTLYGDAANDVLRGEAGDDVLFGGDHNDRLMGGDGDDFLNGGEGRDTIYG
GAGDDVAYGGAEYDLFFDGDGDDVYKGGGGNDIFELQTHSGQNVVQGGLGTDTLRLNGHRDMWQWESVHK
TSQVQTGTVEGGPDGGQPIYSTAHQGKGQYIFYSGDAVVHVQDVEQVVFLGNSGKTFWSHKALEDEEAFS
LNYVASYDDLIANDEVDNTSSNWTIGRDHWVNYGQAENREVTFNPLQYLAANPSVYQLHGFDLTAATRHY
IDTGHDAGLSRGDFDAEQYLKNYSDMRSQFGADLSAATRHYIEHGRAAGRTDDAVSGAMTDAEFAAWLTS
LADQDEVIYLVEADAGEDNEATFYFADRDDLEIADPNAVIFGHAIVANNTSAGSGNDTIYADSTSTGHWL
YLNQQESTSGSEDTLRGGDGADVIYAGADDDSVFGDSGSDSIAGQDGDDILRGQDGSDSITGGDGQDTLY
GHDGADVLVGGLGNDYVRGGNGADRQWGGEGDDSVYGDAGADTLFGENGNDTLKGHDGSDVLLGGEGNDT
LDGMNGSDRLYGEAGNDSLVGDLGDDRLEGNVGDDTLSGGSGNDYLDGGEGDDSLSGGNAQDALFGGEGA
DTLDGGGDNDILYGNDGTDSLDGGSANDALHGGAGADTLNGGDGIDAASYAGSSEAVYVRLDGTNASNFT
GDAVGDVFSGIENLFGSEHDDQLYGDASHNVLWGADGNDTLNGLAGNDDLMGGDGADRLIGDSGIDRLSG
ESGADSLYGGADRDFLFGGADDDHLEGGAGNDSLSGGDGNDSIYVGADDANVSGNDTADGGAGDDLIIGS
NGYDHLKGGDGNDTLNGGDDLATAERDTLEGGTGNDSITSGQVVIPDADRQIYGDYMYGGGGDDTITGGK
GDDVIYTGGPTDNLVGFDHASGGDGDDLIHGSNGKDLLFGDAGNDTLTGGNDGITADADTLDGGDGNDSL
TSGQTLAPEAGREGLGDHLFGQAGDDTLTGGAANDVLKGGSGNDELWGGDGNDSIYSGAAEANQSGNDTA
DGGAGDDLLVGSNGYDHLKGGDGNDTLNGGDDLATAERDTLEGGAGNDSITSGQVETPDADRQAFGDRMY
GGGGDDTITGGKGDDVIYTSGPTENLVGFDHASGGDGDDQIFGSNGKDLLHGDAGNDTLTGGDDGITADA
DTLYGGDGNDHLTSGQTDAPEAGREALGDHFYGEAGNDTLTGGKANDYLEGGTGADSFVFLSDFGQDTIA
DFSTSQSGETIDLSGVSQITSFSDLTTNHLTQSGSDALISDGAGNTITLTGINMADLTADDFLF
>gi|56698493|ref|YP_168869.1| ISSpo7, transposase [Ruegeria pomeroyi DSS-3]
METLERQRGLRPDHGGPGHRKRRAQDDHDRRDLSQGTPHCVEPVREKGGRGRQIGRTKGGMNTKLHAVAD
AKGRPIGFFMSAGQVSDYTGAAALLGSLPKAGWLLADRGYDADWFREALKDKGIKVCIPGRKSRKKAVKY
DKRRYKRRNRIEIMFGRLKDWRRVATRYDRCAETFFSAIMLAATVLFWL
>gi|56698494|ref|YP_168870.1| hypothetical protein SPO3675 [Ruegeria pomeroyi DSS-3]
MLYFDHWTKVPADIWRWPNFSPEEIACRSTGKVGIDPQAMDKLQALRDRLGAPLMLNSAYRSPEHNRAEG
GAPASEHLKARAFDVSMINHDPAEFEAAARAVGFTGFGFYRRNNFIHVDIGPAREWGNRWFDRVPHGAPL
RPAPRFSPPPKLRPETLAEDRGARGTALGAGGGVALIGALGNVVGDLNPTAQAIAFGGAIVLAASLAYLI
RDKIREWA
>gi|56698495|ref|YP_168871.1| acetylornithine deacetylase [Ruegeria pomeroyi DSS-3]
MSLSLEVLERLVAFETVSDRPNLDMIAYVEDFLRTRGFRVHRIADPEEAKAGLFAEIGPSVDGGLLLSAH
SDVVPVEGQSWCVPPFKLTRQGDKLYGRGTTDMKGFLAEMLALADVVHRRDLHAPLKLLISYDEEIGCVG
ISRMKDRLRPLLGRPELAIVGEPTEMQVAISHKGKRSYRADFRGEAGHSALAPRFVNALHLAVDFVTKLR
QMQDEFRQDGNFNGDYDVPYTTLHVGQLHGGEALNLVPDKATLLFEFRHLAEDDPEVIEARIQQAADAVK
GNYADVAHISLDALAGYPGLSVAVSEPLVSRVRSWCDGNISHVAFGTEAGVLSELGIQTVVCGPGSMAEQ
GHKPDEFISEHQLAACSNMLRKGAEEMLYCA
>gi|56698496|ref|YP_168872.1| LysR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MSRLTLRQLEYLVAVGETGSIVRAADRLNVSSPSISSAITQLEEKLAISLFVRQHAQGLSLTRGGQRVFE
QARLVLSGAREIANIAADISESTRGPLAIGCLLTFAQLVLPRMRRGFESGFPDVRIVQKELNQAEIFNAL
QRSEIDVALTYDMDIPTDLKFIGLVRLHPFALLHAEHELANKPAISIEDLAGLPMILLDLPISADYFLSL
FETSQQKPRIVERTRDMAVMRSMVGNAFGYSIANVRPQSDMSPDGSPLVYVPISGPVRSLRMGLLTTSGA
EKSRTVSAFIDYAREQVRSGALRAIGGEALT
>gi|56698497|ref|YP_168873.1| Rieske (2Fe-2S) domain-containing protein [Ruegeria pomeroyi DSS-3]
MTYLRTKLQDLAALPVDRPMGMPGAFYTSQEQFEHEARTVLRTGWHCLGRVDEIPEPGDFFTAQLLNEPL
LVVRGDDQSVRVMANVCRHRGMPLAEGRGNTKRFVCSYHAWAYGRDGALLRAPRMENAGFDAKSCKLPEH
AVQLWNGFIYVNLTPDALPFEHPELDAMLAPYETEDFHLVHVAEEDWQTNWKCLVENFMEGYHLSVVHPQ
TLHGYTPSGLSRKLVSGDGFTSYAANYPDNITPRGEGALGLSEPERKRSSLFAKFPTQVASQAASLLVSL
CIFPVNASLIRVKWTMSVYRDNLDHDTIQQRISLWEEVNREDREKLERMQVALRSAHAVEGPLAEDDFEG
TIRDFQTWLASQDAAVEVA
>gi|56698498|ref|YP_168874.1| hypothetical protein SPO3679 [Ruegeria pomeroyi DSS-3]
MTFSLVARCAKTGMFGMAISSSSPAVAARCAFARAGVGAVASQNVTDPSLGPKTLDLMERGASAEAAVRQ
IAGEATHIAYRQLLAIDGQGTTAIHSGQNVLGNWNEAQGKDVASGGNLLAHDGVPAAIVLAFETSEGHLG
DRLIAAMRAGLSAGGEAGPVHSAGMMLVDKVSWPVADLRCDWTEDCPIEAVATAWDIYKPQLNDYVRRAL
DPGAAPSYGVPGDA
>gi|56698499|ref|YP_168875.1| endoribonuclease L-PSP family protein [Ruegeria pomeroyi DSS-3]
MAHTRIRTFNTADTYPEQALDNDLCQVVVTRGGRTVWMRGQCPQNLDDAKNIDSHDPAEQTHKVMQNIKQ
LIEEAGGEMAHLVKVVVYITDVRHREAVYRTMGEYIKGVHPVSTGLVVQALARPEWLVEIDATAVIPD
>gi|56698500|ref|YP_168876.1| Rieske (2Fe-2S) domain-containing protein [Ruegeria pomeroyi DSS-3]
MPKDHIDPIAALRENTSVPFERARAMPTEVYTEQSFVDAELEYIFRKDWYCVGRADALSAPGDYVACELA
GQPIVVLRDRDGDLRAMSNVCLHRMSTLLHGRGNAKTIVCPYHAWTYNLDGKLRGAPAMTKNEGFCKDQY
ALPQVRCEEWLGWVFVCLDPEATPVAAQLAEVAAKIEGYDMANYSEAFYEEHVWDTNWKVLAENFMESYH
LPVCHAGTIGGLSRLEDMICPPGHAAFNYHTILKDESLRIAMAHPSNDRLEGDARRTTYLLALYPSLMIT
LTPGYFWYLSLHPKGPGQVHIRFGGGMSNDFAADPDAQDNFTALKTLLDEVNVEDRGCTEKVYRGLCSEV
ATPGHLSHLERPNYDFAKYLMARIDAGSSS
>gi|56698501|ref|YP_168877.1| hypothetical protein SPO3682 [Ruegeria pomeroyi DSS-3]
MGTRKGDAMEKFDTVVIGAGQAGIATSEHLRALGIDHVVLERGRIAERWRSERWDSLVANGPAWHDRFPG
MAFSCDGDVFADKECVARYFEDYAKMIDAPVRTGVTVERARPHADRAGFLVETSQGTFDARNLICATGPF
QKPAIPPIIPETSDLTQMHSTAYRNPDALPDGAVLVIGGGSSGSQIAAELHDAGRKVFFSIGPHDRPPRR
YRGRDNVWWLGVLGIWNMDTPAPGTEHVTIAVSGAHGGKTVDFRLLAERGITLLGMSSGYEDGVLHIAND
LKTNLDAGDANMLSLLEAADAYIKRTGIDLPPEPEAWVIPDDPDCVSNPVRALDLSENNIGTVIWATGFQ
FDYDWLEADTLDDRGSPIHQRGISAVPGLYFVGLPWQSRRGSSFIWGVWHDAKFIADQIAIQENYLAYRP
TASS
>gi|56698502|ref|YP_168878.1| LacI family transcription regulator [Ruegeria pomeroyi DSS-3]
MTADTKRPLTLRDVSEASGVSEMTVSRVLRNRGDVSDATRARVLAAAKELGYVPNKIAGALASNRVNLVA
VIIPSLSNMVFPEVLTGINQVLEDTELQPVVGVTDYLPEKEEKVLYEMLSWRPSGVIIAGLEHSEAARAM
LDAAGIPVVEIMDSDGKPVDAMVGISHRRAGREMAQAILKAGYRRIGFMGTKMPLDYRARKRFEGFTEVL
GKNGVEIEDREFYSGGSALAKGREMTQAMLERSPDLDFLYYSNDMIAAGGLLYLLEQGIDIPGQIGLAGF
NNVELLQGLPRKLATMDACRLEIGRKAAEIIAKRLEDPEAEIETRITLEPKISYGDTLKRR
>gi|56698503|ref|YP_168879.1| hypothetical protein SPO3685 [Ruegeria pomeroyi DSS-3]
MALQRLDNRAARALFLDRHGLAEQPSGPARGVALLELITRLGFVQLDSINTVARAHDLILFSRRPSYRPP
DLKRLYEQDRALFEHWTHDAAVIPMAFYPHWHMRFQRDAEMLRARWKNWRRDGFEGKFAAVLDHIRDHGP
VGSSDVGKDEEKTSGGWWDWHPSKTALEYLWRSGALTVIGRDGFQKRYDLTERVIEDHLRPGALDHDPEA
TVDWLCNAALDRLGFATTGELAAFWDSSSPAETRNWAAGAEARGEVETIEITCADGSLRKVLARPDVLDQ
AIAVPPAPGRIRVLSPFDPALRDRKRAERLFGFHYRIEVFVPEPKRVYGYYVFPLLEGDRLIGRIDMKAH
RDCGELRVRALWPERGLRWSPARTRRLEAELDRIRRLAGVEQVILAKDWLRDPL
>gi|56698504|ref|YP_168880.1| HpcH/HpaI aldolase family protein [Ruegeria pomeroyi DSS-3]
MPAPKNPFKQALAEGRRQIGCWMSFAEPIVAEVMGTCGFDWLVVDGEHAPNDIRSIRDQLTALAASPSHP
VVRVPVGEDWIIKQALDAGAQTVLVPIVESADQARQLVRACRYPPTGVRGVGATAARASRFGSVSEYIQT
ADQEICLLVQVENRAGMAALDEILTVEGVDGVFIGPADLSTDMGFQGNSAAPEVRAVVADAMARIRAAGK
APGILGTNEEATQAYLEMGAQFLAVGLDVMLLAQTARSLSARWKTA
>gi|56698505|ref|YP_168881.1| decarboxylase, pyridoxal-dependent [Ruegeria pomeroyi DSS-3]
MKWDEFADWGRRVADWTQDYHLTVGERPVRARTEPGAILNALPATPPETPEAMEDIFRDFEDIVMPGITH
WQHPRFFAYFNSNASAPSVLAEFLASAIAPQCMLWQTSPAATEMETRMMDWLRQALDLPEGFAGVIQDSA
SSATLAAVLTLREKALNWQGNRQGLFGQKPLRIYCSSEVHTSVDRAIWVAGIGQDNLVRIPIKGDWRGMD
PDALEAAIKADLAAGRHPAGLILCVGGTGTGATDPVDRCLDVAEKYGLYTHVDAAWAGSAMICPEFRHYW
SGIARADSIVFNPHKWLGVQFDCSAHFLKNPDDLVRTLAIQPEYLKTHGRDGIINYSEWSVPLGRRFRAL
KLWFLMRSYGMEGLRQRLRNHIAWSGALHDRLTAEPDFEMVTPPMWSLWTFRYRRDGADLDALNLRLVNA
INDDGRIYLTQTRVDGALVIRFQAGQFETTEEDVGMAFDVITEIARALP
>gi|56698506|ref|YP_168882.1| extradiol ring-cleavage dioxygenase family protein [Ruegeria pomeroyi DSS-3]
MPVPAPNLYPPFNIVRLSHVEYRVRDLAASRAFYVDILGLQVTHEESGRLYLRAMEERGHHCIVLVEADT
ADVGVLGFKLYDEPDLERAERFFAEKSLPTAWVERPHMGRTLRTRDPWGIPLEFYVRMDRLPPIHQKYRL
YNGVKPLRIDHFNMFSADVDASVAFYGEMGFRVTEYTEDDESGRLWAAWMHRKGGVHDVAFTNGLGPRLH
HTAFWVPTPLNIIDLLDLMSTSGYVANIERGPGRHGISNAFFLYVRDPDGHRIEIYCSDYQTVDPDLEPI
RWSLTDPQRQTLWGAPAPKSWFEEGSTFESAEPVPSQLKAQPIIAP
>gi|56698507|ref|YP_168883.1| MarR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MRTIRRCGKGRFRRNWPMSSDLPNTSRSLPIALLRARERVMRPVRGILMDVGITEQQWRVLRVLEEEGPQ
DPTRIAEGACLLLPSLTRILQKLEEKQLIARQPDPGDGRKQIVSITPGGTQIIRDNQGASQAVFEGIQAQ
MGPERYEMLLDLLNELYRDKAD
>gi|56698508|ref|YP_168884.1| gentisate 1,2-dioxygenase [Ruegeria pomeroyi DSS-3]
MSEQLGTLEELPQDYREQMAAAGVAPLWPMMRNVLPHDAPRPVTRAGHWSFPALRPLLLRAGELTPVEKA
ERRVLVLSDPGRGTGAMQATATIYLGLQLLLPGESAPAHRHTPSAVRIVVEGLGGYTVVDGERLPMEPGD
LVLTPGGEWHDHGHDGDEPVIWLDALDLPLFVQLEGSYAIEGELQAQRNRPDASQVEYSAAGLAPSRRPG
RGARRYPMMRYPWAATETALRQMAAYGEGIAELDYINPETGEDVLTALGFTAMMLTAGQVETPPLRSCSS
AFHVIAGSGRSEIDGQVIEWGPKDTFTAPVFARIRHEAESEAFMVRIHDRPLQEKLGYYEERAR
>gi|56698509|ref|YP_168885.1| fumarylacetoacetate hydrolase family protein [Ruegeria pomeroyi DSS-3]
MSDSLFTLSPIPGIPVRGESATYPIGRIFCVGRNYAAHAAEMGNEVDREAPFYFTKSAANAILTGATVPY
PPGTENFHYEMELAFAIGKPVFRASRAEAWDAVYAYGCALDMTRRDQQIRERDKKRPWDLGKDVENAAVF
APLTRVADWSPEDDKRIHLEVNGAIKQDATLAELIWKIDEIVSHLSGYYHLRPGDLVMTGTPAGVGPVVA
GDVITGGIDGLDPIALTLGPAE
>gi|56698510|ref|YP_168886.1| salicylate hydroxylase [Ruegeria pomeroyi DSS-3]
MSAERILIAGGGIGGLAAALGLARQGRRVLVLEKAAQLGEIGAGIQLGPNAFHAFDYLGVGDAARALAVY
IDNLRLMDAITGVEITRIPLDDPFRARMGNPYAVVHRGDLHGVFLRACQDSPLVELRTSSAVVGYEQDGT
SATALLQDGTRETGAALIGADGLWSKVRAQMLDDGPPRVSGHTTYRSVIPVEDMPEELRWNAATLWAGPK
CHIVHYPLQGWRSFNLVVTYHNDAPDPVAGMPVTADEVRKGFEHVSPVARQVIDKGQDWKLWVLCDRDPV
MTWTEGRVALLGDAAHPMLQYFAQGACMAMEDAVRLSALVGEGGEIETLLRRYQDSRRLRTARVQLQSRE
IGEHIYHPDGAHAALRNAMMSAKTPEEWYDSIEWLYGGTGLTGAV
>gi|56698511|ref|YP_168887.1| TRAP dicarboxylate transporter, DctP subunit [Ruegeria pomeroyi DSS-3]
MRIILLREGQREDNMTYRRKILGLIGGAAVAALATGFSAGTALAQEVTLKLHQFLPAQANVPKLVLDVWA
DGVEKDSGGRIKVERYPSMQLGGKPPELMDQAIDGVADVVWTVVGYTPGRFPSTEVFELPFMMTNARAVS
HAYWEMFEKHMKDDEFKDVHILGTWVHGPGMIHTADPVETPADLQGMKIRGGSRSVNSLLTKLGATPVGM
PVPAVPEGLSKGVIDGTTIPWEVTTALKVPELVENHTEFEGRALYTLTFVLAMNKAKYDSLPDDLKAAVD
KNSGLEFSVFAGGTQADADGPARQVAEDLGNNIITIDAAGVEEWRALAQPIYDEWLADMDSKGKDGKALL
EEAQMLIEKYTPQYSN
>gi|56698512|ref|YP_168888.1| hypothetical protein SPO3694 [Ruegeria pomeroyi DSS-3]
MHKLMTGLARTLAIVGGIVLSLLILLTCASILGRLLNGFFHGDFMQSAAPGLADWAIGIGIGPVNGDFEL
VEAGVAFAIFCFLPLCQITAGHASVDILANTFSRRVNRFLRMVTEVIFAAVLVLIAWKLFDGMMSKRAYA
ETTFLLQFPIWWAYALSFVAAFAAALVGVYMGAVRSYECFSGRILVWDGVEATQ
>gi|56698513|ref|YP_168889.1| TRAP dicarboxylate transporter, DctM subunit, putative [Ruegeria pomeroyi DSS-3]
MSALEIGIASFPALMVLIFLRVPIGLAMFLVGLVGLVLVTDGTQVAFARLKNETYTTFSSYSLTIVPMFL
LMGHFATLGGMSTALFKAAEGWLGHRKGGIAMASIGACAGFGAICGSSLATAATMGRVALPELRQYGYAG
GFSTATLAAGGTLGILIPPSVVLVIYAILTEQNIAKLFLAAFIPGIMAALGYVLAISVYVRLYPDSAGTR
PAVPYGERFAALLQVWPVLLVFGLVVGGIYLGWFTPTEGAAVGALGTGVIAWLNGGLTRTSLAESFLVTA
RSTAMIFFIVLGAAFYNGFLALTQVPQELSNFVVSQGYSPWVVLALILAFYLVFGCLMDSLSMILLTIPI
FFPVISAMDFDLVSLATMQADAAMEVLKAGVPEAMSAETLAGIKDAIASGAELTREQMKELGIRVTRGMA
NRAEAEHVAIWFGILVLIVVEVGLITPPVGMNLFIINAMDRTTRMADTYKAVMFFVGSDIVRVIILVAFP
AITLFLLPG
>gi|56698514|ref|YP_168890.1| feruloyl-CoA synthase [Ruegeria pomeroyi DSS-3]
MTPIARTTDWLHRWAAETPDAVFLAERSGAGWREQSYGETLGRVRALAAGLLACGLEPGDRILVVSGNSV
DHGTLALAAQYVGLVIVPVAEQYALIPGALKQLHHIIGLIDPAMVYAEDGAQFAAALAMEETAGRRIVVG
RNLAPGMTLLGELERESGDISGAADAVGPDTVAKILMTSGSTSHPKGVLTTQGMLCANQAQYARALPFLT
ERPPRLVDWLPWNHVFGGSNNFNQMLAFGGALYIDGGKPAPALIGKTFENNRLMNGTIAYNVPVGFAQLR
DEMRRDPALKHHFFADLDMLFYAGASLSADVWRDLSEMAAEVRDTQPLITTCWGMTETAPACIFQHVPAN
LPGIIGVPLTGVTAKLVPADGDRFELRVAGPNVFAGYFRDPEKTAAAFDDEGYFCTGDAVAMVDARDLSQ
GLRFEGRLAEDYKLATGIWVRASALRLEVLAALAPLAADVVLTGEGAAEIGLLILPTPALATGLAAEGGV
LRPGAMADEIADRLSRLNADRGSSARIARALILSDPPSMAEGEVTAKGNLNFRKLLERRAEIVSRLYGDD
DEARIDVH
>gi|56698515|ref|YP_168891.1| benzoate-coenzyme A ligase [Ruegeria pomeroyi DSS-3]
MSANAAHYFVDRHVEEGRGARPAFREAAGARRRQSYGELARDSGAVAGALARAGIPREARAAMLVLDQLE
FPALFWGCLKAGVVPVPLNTLLATSVYEVILNDSRASILFVSEELWPVVQPAALASPHLTRIVVIGAAPD
GTQSYADFVQGADILPAVEVSPDDVAFWLYSSGSTGQPKGVRHVHASLKATADSYGARVLGIEPDDLVYS
AAKLFFAYGLGNGMTFPMSVGAETILFNGRPTPDGVRDIIATEKPTVFCGVPTLYAAMVAMLDREGVPDV
TLRRCISAGEALPEEIGRSWHRQWGVDILDGVGSTEMLHIFLSNAPGDVVYGTSGRPVPGYEVRLVDESG
ADVGPGGLGELLVRGASAADGYWNKRDKSRATFEGEWTRTGDKYELTSDGRYVYCGRTDDMFKVSGIWLS
PFEVEQALVAHPAVLEAAVVAARDADGLEKPKAFIVLKAAETEGLADTLRDFVKEKVGKWKYPRWIEFVE
DLPKTATGKIQRFKLREGG
>gi|56698516|ref|YP_168892.1| hydrolase, putative [Ruegeria pomeroyi DSS-3]
MDWSANPADKLRIDEVGLEYACHGPAPGDAPTLVLLHEGLGCVAMWRDFPAQLAARTGLGVLVYSRQGYG
GSDPVTRPRPLDFQTREALEVLPAILDAAGIRQAILLGHSDGATIAAIHAGSVAGHRIRGVILEAPHFFT
EPGGLASITEARAAYESGDLKQKLARYHADPDGAFLGWNDAWLDPGFATWNVAEVIDYIRVPILAIQGRQ
DQYGTLAQIEEIESRAYCPVDTLILDCRHEPHRECADRVLDEVAEFCSRLLRIEAADVIPA
>gi|56698517|ref|YP_168893.1| hypothetical protein SPO3699 [Ruegeria pomeroyi DSS-3]
MELPPLSDPYMPGLTARPPEDLFEALHQSVPNQLRPDSLAACPAWIAGWRLLELGYFWEAHEVWEPVWMA
LPPNDAARHAVRAAIQLANAALKLRMGRQGAAQRLCSLAREAAGRANGAAAPEGWHDLFRTHLEAVEGRF
EVLQNNA
>gi|56698518|ref|YP_168894.1| benzoyl-CoA-dihydrodiol lyase [Ruegeria pomeroyi DSS-3]
MTQRIDFQTDPSRYRHWRVAYDGEIANLYMDVDEQGGLFPGYELKLNSYDLGVDIELADIVQRMRFEHPE
VKVVVMQSGKDRVFCAGANIRMLGGASHAHKVNFCKFTNETRNTYEAAEADSGQKYIAAVKGACAGGGYE
LALACNYIMLTNDSSSSVALPEVPLLAVLPGTGGLTRVTDKRKVRRDLADVFCSVEEGVRGQRAVDWRLV
DEIAPNSKFDEVVQERAREFASASVKPSGLTGIALTPLDRRFAEDGSVTYSTVEVVVEREAGRATLTISG
PTDAAPDTVDALQAQGAEAWILRAARELDDAILHLRLNERRIGTLVIQTQGDGAAVAAHEALLLENRDHW
LANEILQHWKRVLKRVDMTSRSLVAIVEHGSCFAGPLAELLWAVDRSYMMLEEFEGDNRPLAAITLSPGN
FGTYPMGNDLSRLATRFLGTPEAVEAARARIGEALEAEEAEKLGLVTYVLDDIDWEDEVRVFLEERASFS
PDAMTGMEANLRFAGPETMETRIFGRLTAWQNWIFQRPNAVGPDGALQRYGTGVRGDYDMERV
>gi|56698519|ref|YP_168895.1| benzoyl-CoA oxygenase, B subunit [Ruegeria pomeroyi DSS-3]
MLDLINVSYDTQIPNNVGLSQDKKVLKALEKWHPGYINWWNDLIPQNFQESLVYLRTAVSVDPKGWAKFD
YVKMPEYRWGVLLAPQVENRTIPCGEHYGQPAWQEVPGEYRNLLKRLIVIQGDTEPASVEQQRLLALTAP
SLYDMRNLFQVNVEEGRHLWAMVYLLHKYFGRDGREEADDLLRRQSGSEEAPRMLGAFNEETPDWLSFFM
FTYFTDRDGKMQLESLAQSGFDPLSRTCRFMLTEEAHHMFVGETGVGRTIERTCQVMKENGIDDPYDTGR
IRDLGVIDLPLIQKKLNLHYTLSLDLFGQEVSTNAANAFNAGIKGRYMENRLTDDHQLQQDTYTVWDFED
GKAVQKQVAALTAINMRLRDDYTKDAAGGVGRWNKIIEKHGVDFQLSLPHEAFHRKIGVFADKHFDPSGQ
PVSGAEYDAGLPKWLPTHADGDFIQSLMKPCYEPGQYARWIAPPKVGIDNRPGDFEYVKLHMA
>gi|56698520|ref|YP_168896.1| hypothetical protein SPO3702 [Ruegeria pomeroyi DSS-3]
MTEGVTLLFAEPGLIGQHEEPTMQIDRSKPETPHLHALSGQISTLQGPCVGCSDCVGLCKALIDTLVVPD
LVLTRKRETS
>gi|56698521|ref|YP_168897.1| benzoyl-CoA oxygenase, A subunit [Ruegeria pomeroyi DSS-3]
MTCPEQAIEHDDMNVVVDVEKCKFCMDCIPVCPTGSIDNWRVVDTPYSLEDQYGWMDLPPQEDVAGDEAG
LEALDDAMAALLAEAHKGAGGKSRAPATASKPTINLYTLGKPAEARVTGNYRLTAESSDSDVRHIILDFG
GQPFPVLEGQSIGIIPPGTDEAGNPHLPRLYSVSSPRDGERPNFNNLSLTVKREPHGICSNHVCDLKPGD
TVRVTGPFGATFLMPSDPAAHLLMICTGTGSAPFRAFTMRRQRESPKLRNSLTLVFGARRPQELPYFGPL
AKVPEQFMAKHFAFSRQDGAPKHYVQDRLRAEADRVGELLADPLTHVYVCGLKAMEQGVEEAFKDIARAQ
GIDWTGLRDRMRDEGRYHVETY
>gi|56698522|ref|YP_168898.1| anaerobic benzoate catabolism transcriptional regulator [Ruegeria pomeroyi DSS-3]
MTEITNFRGETTPNSARDQAEAEVADLIARVGERVRAARQRRGIPRRVLSEISGVSPRYLAQLEAGEGNI
SIGLLQRVATALDHRIEWLVGEDDPWSSDAMRVADLYRVAGMDTRAEVLRLLSPAPSLAARAGRICLVGL
RGAGKSTLGQRLGAALGLPFVELNDEIEDQAGMPVAEVMALYGQEGYRKLEAQAVARIVATHDALVLAVA
GGIVAEPETYKTLLAHFHTVWLRASPIEHMERVRAQGDERPMAGNPEAMEELRSILTSREALYGRAEAQI
DTSGQSVEASLSQLTRLVRERGYLD
>gi|56698523|ref|YP_168899.1| branched-chain amino acid ABC transporter, periplasmic branched-chain amino acid-binding protein [Ruegeria pomeroyi DSS-3]
MKRILCAGTVSILALASAAAADIKIAHVYGKTGPFEAYAKQSHDGLMLGLEYATGGTMEIDGEKIVVIEK
DTQLKPENGKALLEEAYGDDEVDLAVGPVSSGVALAMLPVAEEYEKVLIVEPAVADSITGANWNRYIFRT
GRNSSQDAVSNAIALAGENVHIATLAQDYAFGRDGIAAFKEALEGAGSGIVHEEYVPTDTTDFTAAAERI
FNAMKDLDGEKRLFIIWAGGGNPMGKIQAMDPSRFGIEIATGGNILAAMAAYKDFPGMQGATYYYYEIPQ
NPVNDWLVKTHQDRFGTPPDFFTAGGMAAGIAVVEAIKKAGSTDTEALISAMEGMEWETPKGKMMFRPED
HQAMQSMYHFKIKVDPNVDWAIPELVRELTIDDLPIPIRNN
>gi|56698524|ref|YP_168900.1| branched-chain amino acid ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MTSPILATEGLTVRFGGHVAVDAVSCAFHTGELTAIVGPNGAGKTTYFNLISGQIPASAGRVLLRGRDIS
GQSVSQRTRAGIGRAFQLTNLFPNLSVLENVRLVVQSKAGQGMNLWSMASRHAELTEAAEAILTRVRLID
NRDQTVSELSHGNQRKLEVALLIALDPTVYMFDEPTAGMSVDEAPVVLDLIAELKEQRDRTILLVEHKMD
VIRTLADRIIVLHNGALAADGDPATVMASDVVQEAYMGRELEDV
>gi|56698525|ref|YP_168901.1| branched-chain amino acid ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MSDPILRLEGVYTNIAQYHILQGVDLEVPRGAVTMLLGRNGVGKTTTLRSIIGHWRAHQGRILLDGQDIT
RMPTPAIARAGVGFVPEDMGIFANLTVEENMVLAAVSGPIDSARLDWVFQAFPPLKTFWKSEAGNLSGGQ
KQMLSIARAMVEERRLYLIDEPTKGLAPAIVSTMARALRELKAQGASILLVEQNFSVARALGDSACVMDD
GRIIWSGEMRELVTDAALQERLMGLSMEAH
>gi|56698526|ref|YP_168902.1| branched-chain amino acid ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MSMAPEHAPTMARLSLAQRLAPWMPVLLVPLLVLAGLLAIPNTSSWLTLTVSGLAMGMMIFLMASGLTLV
FGLMDVINFGHGAFVSVGAFVGVSVLLLLGGMTGAPSLALNLAAMGLAVIGAMLATGAMGWAFEKVIVEP
VYGHHLKQILVTMGGLIVVEQLIIVLWGPEEIYISRPEALKGAITFAGAALEKYRLVAVGLGLVVFAAMR
WTLRRTKIGLIVRAGVENGEMVQALGYRLRLVFVGVFIAGSALAGLGGVMWGLYQEVVSAHMGNQAMILI
FIVVIIGGLGSVEGCFIGALLVGLMQNYVAFLEPKVALISNIGLMVAILMWRPMGMIPVVKAK
>gi|56698527|ref|YP_168903.1| branched-chain amino acid ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MIKAVLSGDMPRSLVLALILGLILVCLALAPFLFPGVRTVDTAARICVFIVLVASYDLLLGYGGIVSFAH
TMFFGIGAYGVALALTHLGRGFDAILVGAGASALLAAALAFVIGLFSLRVRAIFFAMITLAVASAVAVLV
SQLSGLTGGEDGLTFKTPRALGPAFKFGDELFGVKLNGKLLSYYVVFIGSLVLFLLMLRVVNSPFGRVLQ
AIRENDFRAEAIGYRVVYYRVAATCLSAAVAALAGSLYAIWLRYVGPDTTLSMEIMIDILLMVVIGGMGT
MYGAVIGATLLVLAQNYLQNLMGVAGSLVDGVPVLPQLLDADRWLLWLGVLFILSVYFFPTGVVGRLRRG
>gi|56698528|ref|YP_168904.1| hypothetical protein SPO3710 [Ruegeria pomeroyi DSS-3]
MVEDPDSFYASLRPVMDFPELSEPSRFTPLPDDWVLGTADIVDSTGEIARGRYKTVNMVGAAVISAMINA
MGDQRFPYVFGGDGAGFAVPGDKAERVRTVLADLRRWAAEEFDIALRAALVPVATIRAARRDVRVARYAA
SQGVDYAMFSGRGLAWAEARMKAGEFVVDPAPPGAQPDLTGLSCRWSNMRARNGQIVSLVIAPTETASER
DFADLARRVMATADGLERSGHPVPPGGPGVTWPPPGLTLDAHVSREGRSLALHKMKLLGQNLLIWLLFRT
GLRLGDFRPDHYARMVSRNADYRKFDDGLKMTLDCDAETRARIETILEDARRRGKIRYGLFAQDEAMMTC
FVPSAMRDDHVHFIDGAAGGYAAAAERIRKA
>gi|56698529|ref|YP_168905.1| hypothetical protein SPO3711 [Ruegeria pomeroyi DSS-3]
MQAGLIILCLAYVLSQFFRAFLAVLTADLARDIGAQPDDLAFASGLWFLTFAAMQIPVGWALDRIGPRRT
AAALLLVGGGGGAALFALATTPVHISAAMVLIGVGCSPVLMASYFIFAREYPPAQFATLAAVMLGVGSVG
NLVASYPTALAVELMGWRATLAGLAAISAAVAAGIWLSVRDPEMVQHDTKGSLLDLLKQPLLWTILPLML
VAYAPAAALRGLWAGPYLRDVFDLDTGQIGQATLIMGAAMIAGTFAYGPLDRVLGSRKWVVFGGNLGGVL
ALALLVLWIDLGVWSSVALLAAIGFLGASFPVIMAHGRAFIPTHLVGRGVTLLNLFGIGGVGLMQFVTGR
LHESYAAAGPAAPYTAIVTFFAVSLVVGLVIYLFSRDSLA
>gi|56698530|ref|YP_168906.1| aspartate-semialdehyde dehydrogenase [Ruegeria pomeroyi DSS-3]
MGYRVVVAGATGNVGREMLNILAERQFPVDEIAALASRKSLGTEVSFGDKTIKTQDLDTFDFTGWDMALF
AIGSDATKVYAPKAAAAGCVVIDNSSLYRYDPDIPLIVPECNPQAVHGYAKKNIIANPNCSTAQMVVALK
PLHDRATIKRVVVSTYQSVSGAGKDGMDELWEQTKAVYNPTSDVPPKKFQKEIAFNVIPHIDVFMEDGST
KEEWKMVAETKKIVDPSIKVTATCVRVPVFVGHSESINIEFEEFLDEDEARDILRESPGIMVIDKREPGG
YVTPKECVGDFATFISRIRQDSTVENGLNLWCVSDNLRKGAALNAVQIAELLGREVLKKG
>gi|56698531|ref|YP_168907.1| hypothetical protein SPO3713 [Ruegeria pomeroyi DSS-3]
MPACRYPIASDQGFLMRFFVPFVVALFSTVTPGLAGSYSTETTVTAATVFPQGAAVRRQLSMELPAGRHD
LTLLGIPVDGPELETLDIQVAGARVLARKFRHSDVPWHDYRSAAYLAARERVRAVEQQILAVRDAAETAR
LRARAADQASGFLARLGENEGLAGAEPETLRAITRMIAEEALTSARAAQDAEIEARGIERKLTALEEELQ
AAMQDLAAVSGATEDRGVLTLDLELEAEGTVEIDIGYLTLEAGWQPVTDLYLTTGASPQVDIRLGARVTQ
DTGDDWSEIALSISTLRPMDRASPSTLWPLLRRIVEPEREERMFKGAMAEAVVEAPVIVDEFQPAYDVPG
TGQTYTLSAPVTLISGVEDTFLEIGRVSEAAEVFAQAAAQHDSHAFRMARFRNSTGRTILPSDSGRRFVD
GVMVALEATPQIVEGEEVTLGFGPIYGLTVERAVLNRSTGDTGIITRSNAQNERVEIAVRNLTGESWPLR
VFDQVPYSEQEDLVIDWTATPKPDEQDVDRLRGILAWKMELAPEAERIIRLDTAINWPEGMELR
>gi|56698532|ref|YP_168908.1| hypothetical protein SPO3714 [Ruegeria pomeroyi DSS-3]
MSLREIMLKLDESTLRAAMRLAQDSDVTLGQFVRVAVEAEIQRRSRNAKTPNRADERLLASLRTLLAADF
AHARSWADLSCRLSRQGFALREAGGGLALHRHPSGERLCKASELGHSYATLMRRFDAPFPGHSHRYLADR
MLGRPDRNDITAAPSPRAS
>gi|56698533|ref|YP_168909.1| carbonic anhydrase, putative [Ruegeria pomeroyi DSS-3]
MKLARPLPNYLVQRYHGWKATTYTENQVWYRRLASEGQRPRAMVISCCDSRVHVTSIFGADQGEFFIHRN
VANLVPPYLPDGDHHGTSAAVEYAVTVLKVAHLIVLGHSQCGGVRGCLDMCKGHAPQLEAKESFVGRWMD
ILKPKYDHVAKIEDEDEQVRQLEKHAVVASLENLMTFPFIASAVEEGSLSLHGLWTDIGEGGLQCYEPGD
ERFVPV
>gi|56698534|ref|YP_168910.1| hypothetical protein SPO3716 [Ruegeria pomeroyi DSS-3]
MVVEVITLVQSESVRLDPDRLGGLYRQLGDAGAEDVVCRAIEELAVRLTNCERLWRARDWTALRKCARSL
IAISEQIGMVALARVARQVTDAIDNGDYVATSAVLYRLIRVGEKSLTEVWDQQDLSI
>gi|56698535|ref|YP_168911.1| cytosol aminopeptidase family protein [Ruegeria pomeroyi DSS-3]
MLERSQMPLSFAPADADALPLHVIEKTALDGWLQGQPASVAAWVRASGFTGAIGQALPVPGETGAPVMAL
AGYGSAETRARKRFVLAAAAESLPEGIWRIGSGLPEAQAEAECFGWLMTGYAFDRYKGQSPAKARLVAPA
GVDAARIEAMATSEALTRDLINTPAQDMGPDALQAAVEALAAEFGATCTAIVGDDLLSHNFPMIHAVGRA
AARAPRLIELRRGTVGPKLTLVGKGVCFDTGGLNLKPGNSMALMKKDMGGAANVLGLARMIMALDLPVQL
RVLIPAVENAVSGNAFRPGDILTSRKGLTVEINNTDAEGRLVLADALALADEGAPDLVISMATLTGAARV
AVGPDLAPFYSDDDSAAQALAEAALGAADPVWRMPFHTPYEEMIEPGIADLDNAPGGGFAGSITAALFLR
RFVVAPYMHFDIYGWQPVKAPGRPKGGVGQGPRALLAALPRMLDL
>gi|56698536|ref|YP_168912.1| NLP/P60 family protein [Ruegeria pomeroyi DSS-3]
MSAHAILRPVVDLLRCPEGPRDRQVLLGARVELLERQENWARIRADKDGYEGWLPADVLGADAVPTHWVS
APSTHAYARADLKSPDLMALSFGSRVAVHAVSGRFAETAQGHIPVQHLTPMGQRLTDPVAVAELFLGTPY
LWGGDSRWGIDCSGLVQAALLACGHPCPGDSGPQSRAVGTLMPPGTQPRRGDLLFWTGHVALVADAERIL
HANANDMAVAYEPTAAAIARIIAQGEGPVTAHRRPAIHA
>gi|56698537|ref|YP_168913.1| thiosulfate sulfurtransferase, putative [Ruegeria pomeroyi DSS-3]
MQDDPKTLVSTDWLAAHLKDPDLRILDGSWHLPHLGRDPKAEYEAAHIPGARFFDIDDISDHRSDLPHMV
PPVEKFMSRLRAMGVGDGHQVVVYDSLGLQSAARVWWLFKLMGQDNIAVLDGGLPKWQAEGHPIEDLPPV
IRDRHMTVRVQNHLLRDVTQVSAAAKLHDHEIVDARSAGRFAGTDPEPRPGLRGGHIPGSKNVPFGTLLN
KNGTMKSPADCRAVFEAAGVDLKKPVITTCGSGVTAAILSLALQRMGKTDHSLYDGSWAEWGAFPTLPVA
TGEN
>gi|56698538|ref|YP_168914.1| aromatic amino acid aminotransferase [Ruegeria pomeroyi DSS-3]
MFENLKAQPADKILALMQMYKDDPRSDKIDLGVGVYKNAEGVTPVMRAVKAAEKIVWEQQESKSYTGLIG
DPAYSDAMIKLILGDAVQRANVGAAATPGGTGACRQAFELIKMASPEARVFVSDPTWPNHISILNYLGMT
MVPYRYFDADSRGVDFEGMLVDLGQARAGDVVLLHGCCHNPTGANLNLSQWREVVKLINAKGLVAMIDIA
YQGFGDGLEEDAQGTRLVASSVKECLIAASCSKNFGVYRERTGLLMAVSQDSGQTALNQATLAFLNRQNY
SFPPDHGARVVTTILNDDALRADWMAELEEIRLSMLGLRQQLADELQRLSGSDRFSFIAQHRGMFSRIGA
APELVEKLRTEFGIYMVGDSRMNIAGLNAQTVPILAKAIIDAGI
>gi|56698539|ref|YP_168915.1| hypothetical protein SPO3721 [Ruegeria pomeroyi DSS-3]
MTARKIHRWNGALFAAFLLLHFIAHLSGLWGVDAYNATQDALRLIYRNPVTEPLVLASALVQMGLGLKLL
IARIRRGLREPWARAQVISGGVVLYFMTEHLIALMLARWVDGLDTNFYWPASVMSGAPFTWYFIPYYSLG
VIALFVHLGCALRLILLRRGARGQARVAFWGIVLAGIIIAWLIVAMLLGAFYDITLPPEWLAYLRKFVPG
FTS
>gi|56698540|ref|YP_168916.1| Rrf2 family protein [Ruegeria pomeroyi DSS-3]
MKHTEGLEWAAHACSLLAALPPDTSLPARLLAEFFDLPEPYLAKQMQKLSAAGIVETRRGPRGGYALARA
PAEISLLQMVQAIDGETRHFTCTELRRCGPSGVEDSQYLRPCGIARSMWRAEAAWRRELAGVTLADLLRM
GMQDTPPEQAAKALAWFQEKLSQDKPTQEQTP
>gi|56698541|ref|YP_168917.1| ammonium transporter [Ruegeria pomeroyi DSS-3]
MTLIKTLLPAAAVIALPTLGLAQEATADITPPNEEIGYIFTTFMFLVSGFLVMWMAAGFTMLEAGLVRQK
NVTMQLTKNIALFSLAALMYYLIGYNLMYPGDGWSIDGVLGAFSPAAMEPVGLADTETDLTYASVGSDFY
FQLMFCATTASIVSGTLAERIKLWPFLVFVLVLTGLIYPIQASWKWGGGFLDAAGFLDFAGSTVVHSVGG
WAALAGALILGPRLGKYKDGRVIPFMGSNLPLATLGTFILWLGWFGFNGGSQLYMDTAGNVADISRIFAN
TNTAAAGGAVAALLLTQLLYKKVDLTMVLNGALAGLVSITAEPLTPGLGSATLIGAVGGVIVVFAVPFLD
RLKIDDVVGAIPVHLMAGVWGTLAVCLTNGDANLGTQLYAIVVVGLFTFVVSGAVWFILKMVMGIRVSEE
EEINGLDMAELGMEAYPEFSKS
>gi|56698542|ref|YP_168918.1| nitrogen regulatory protein P-II [Ruegeria pomeroyi DSS-3]
MKLIIATIKPFKLDEVREALTEAGIRGMMVTEIKGFGTQSGHTEIYRGAEYTVNFVPKIKLELVVADQIA
EQIADTIARTARTGKIGDGKIFVLDVEQALRVRTGETDDDAL
>gi|56698543|ref|YP_168919.1| 1A family penicillin-binding protein [Ruegeria pomeroyi DSS-3]
MFALAERQRQRRFRNEIPANSAPESRKVAHFLHIDVRLPKNASAIKGKDREKHTSTVSPARAMVRQRQRP
GRVGMTDSKRRKSQLVADKRYPTKGKPAAAGAKRKPAPKRKAPAPKRPRRGGPLGWLSRFFGWIFGLIWG
FAWRIGMIVALLVGLAVALVYSTLPDVTALLDGRARGSVTLLDREGDVFAWRGDQFGGVITTDTVSPHLK
NAVVATEDKRFYYHVGLSPRGIASAVRINLREGRGPLSGHGGSTITQQTAKLLCLGVPFDPEEWKSEAAY
EADCRRGSLWRKVKEAVYSLAMEAKYSKDEILNIYLNRAFLGAGARGFEAASQRYFGKSSAQVDPAEAAM
LAGLLVAPTRYAPTNSLKRSQERARVVVALMEEQGYLTAAQADGARANPARLSEAAAAQAGGYFADWVMS
ELPDYFGGNTTEDVIIRTTLDQRIQTSAEEAMRFVFQEKVRDGSKAQAAIVVMSADGAVRAMVGGRDTKV
TGAFNRATQAARQTGSSFKPFVYATALELGHSPLDTVVDEPYCINIAGSGQWCPKNYTNKHYGRVTLAQA
LKDSLNVPAVKVAEAMGLDNVRRVASDFGIDSDLAAGPALALGASESSLIEMTGAYAGILNGGSSVEPYG
LTELHLQGENEVLMATGTGIGERVINKDAAAQLIWMMEKVISEGSGRRAALPGRPAAGKTGTTQAARDAW
FIGFTADYVTGVWMGYDDNTPLKGVTGGGLPAEIWHETMIRVHEGTPVNPLPMQAPRQPKPIAQPKPQQP
KGGLGQAVDQLLRDLFGN
>gi|56698544|ref|YP_168920.1| toluene tolerance family protein [Ruegeria pomeroyi DSS-3]
MPSKLFSRRSFVTTACAGLAALALPLPAVALTEARAASLVNEVVTEINRVIASGKSENAMIRDFEKLFVR
YGDVPIMARYALGPDARTASPAQLKSFTQAFQGYISRKYGKRFREFIGGEVTVKTARKIKAGYEVKTSVK
LQGQAPFDVTFLVSDKSGKDKFFNMFIEGVNLLLTERTEIGSMLDRRKGDLNALIRDLASAG
>gi|56698545|ref|YP_168921.1| VacJ lipoprotein, putative [Ruegeria pomeroyi DSS-3]
MSKLSLSIFRFSLVAISALLSACAGQSPDSNAGGRVHDPYENTNRAIHNFNRGVDKALFRPAAKGYVTVV
PRPMVNSFNMFAENLSLPGQAVDYLLQGKPKEMGTTLFRFVVNSTVGFAGLADPASDFEIPRADTDFGET
LHVWGVAEGPYLELPLYGPSTARDAVGVVVNLFTNPVDFAPTRPINNLGLYAEVVRRLGDRGLYSDTVDS
ILYGSSDSYAQLRLIYLQNRRFELASDDEDAYLGLYTDPYAEPSSAAVTDPYEDPYAE
>gi|56698546|ref|YP_168922.1| type I secretion system ATPase [Ruegeria pomeroyi DSS-3]
MKPRSHLHGAEELRAARRQSRGLYWFVALFSFFANLLMLTGPLYMLQVYDRVLGSRSEQTLVALSLLVVF
LYGVMGILDYTRGRVMSRAGARFQEALDQRVFDAMVRRSAVAQDPVAQTGLADLESVQRFIASPVAMAIF
DLPWTPIFLFAIAIFHPWLGLLAVGGGVLLIGITGFNQLFSRKPALNAAIANNRAGKMGDEIRTEAETIQ
SMGMRRAAFDRWRKARVTSLTEGLTAGDVMGRFSTLTKTLRLFLQSAMLGLGAYLVLQGELTPGAMIAAS
ILMGRALAPVEMIVNQWQVVQRSLKGWSSLSELLEKAPPENKRMDLPKPKAKLDVQSLTVVPPGDTRAQL
KTVSFTVQPGQAIGVIGPSGSGKSTLARALTGVWRPAGGTVRLDGAALDQYDPDVLGQHIGYLPQRVQLF
EGTIAENIARLSGKPDAKKVVEAATKAAVHDMILQLPDGYDTHITAGGGRLSGGQMQRVGLARALYDDPV
IVILDEPNSSLDNDGSVALNKAIRSLKEAGKSVLIMAHRPAAIAECDMLLVLDHGVRMAFGPKDQVLKEM
VTNHQVIKGNKTMGGVR
>gi|56698547|ref|YP_168923.1| HlyD family type I secretion membrane fusion protein [Ruegeria pomeroyi DSS-3]
MSAQDFSARKPIILGLLGLIVLVGGFGTWAVLSQIAGAVVAGGRIEVDRNRQVVQHLDGGVVAEILVDEG
DTVPEGQTLIRLDSNLLNSQLLIAEGQLFELMARRGRLEAERDSNSEIVFDEDLLEAARARAEVAELLDG
QERLFRARQESVTKETEQLEKRRGQIGNQIEGIVAQQRSRRSQLELIEQELVSQQSLLDKGLAQAGRVLS
LERTKAELEGELGELIASQAQQEGRITEIDIEILKLGTTQREDAITQLRDLQYRELEVAEQRRSLLEQLS
RLDIKAPVSGIVYGLQVHTPRSVIRPADPVLFLVPQDRPLVIAAKVETIHIDQIHLGQSVTLRFSALDQR
LTPELIGTVMQVSADAFVDEASQASYYRVEIQLNEGEVDKLPPGAILIPGMPVEAFIRTADQSPIYYLVK
PLADYFTKAFRET
>gi|56698548|ref|YP_168924.1| endoribonuclease L-PSP family protein [Ruegeria pomeroyi DSS-3]
MGYEDKLASLGVTLPNAPAPAANYVPFVKIGNIVYVSGQISNDETGLITGKLGDDMDVNAGAAAAKRCAI
NLLAQVKAACGGDLDQLVRVVKLTAFVNSTPDFTAQPQVINGASDFLVEALGEAGRHSRSAVSAAALPLG
VAVEIDGIFEVK
>gi|56698549|ref|YP_168925.1| glycerophosphoryl diester phosphodiesterase, putative [Ruegeria pomeroyi DSS-3]
MTPMLPAALLGQPVAHRGFHDIAAGRPENSRAAIRAAIDAGYGVEIDLQLTRDGQAVVFHDYDMGRLTGR
AGPIRQISAAEAAEVALLHGDGEGIPTLAEILDLAAGRAPLLIELKDQDGGMGPDVGPLEQATADALAGY
RGAVAVMSFNPHSIAAMARLAPDLPRGLVTSAYDPAEWPLSLATCERLRDIPDYDRVGASFISHEVEDLS
RPRVAELKARSVPVLCWTVRSAEQEAEARRIADNITFEGYAA
>gi|56698550|ref|YP_168926.1| hypothetical protein SPO3732 [Ruegeria pomeroyi DSS-3]
MDQAQIEVQIVPSLTGIAAADWDACACPESADGGPPHDPFTTHRFLSALEESGSVGRGTGWQPQYLTAHL
DGMMIAAAPMYVKSHSQGEYIFDHSWAHAYERAGGHYYPKLQITVPFTPATGRRLLVRPGYEGIGQSALI
QGAVQLAANNNVSSLHVTFCTEAEAEAGAEMGLMHRVSQQFHWVNDGYADFDGFLAALSSRKRKAIRKER
AQAQGFGGQIRELTGGDLRPEHWDAFWRFYQDTGARKWGSPYLTRAFFDIAHQTMADDMVLVLAERDGIP
VAGALNFIGREALFGRYWGCVEHHPCLHFELCYYRAIDWAIAHGLARVEAGAQGEHKLARGYLPAVTHSL
HWIGDPGFADAVARYLEAERAAVDEEIEILTDYGPFRRAQVEERE
>gi|56698551|ref|YP_168927.1| pterin-4-alpha-carbinolamine dehydratase [Ruegeria pomeroyi DSS-3]
MSERLSEETRGPLLGPLFANGWAMVDGRDAIAKTFAFDNFVEAMGWMMRVAIWAEKWNHHPEWSNVYGKV
AVVLTTHDVDGLSALDAKLARKMDSLC
>gi|56698552|ref|YP_168928.1| MerR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MKILDIGEIAAQSGVPPSTLRYYEEQGLIAPIGRKGLRRQYGPQTLLRLTLISMGKAAGFSLPEIAQMLG
ADGRPDLPRDELHARADDLGRQIRRLQLLQETLRHVADCPAPSHLDCPSFQKLMRQAERTAAWGGKHATR
>gi|56698553|ref|YP_168929.1| major facilitator family protein [Ruegeria pomeroyi DSS-3]
MKSPVETTPAGAIWRDRRAQALLLAATLTIMANATISPALPGLAREFADHPQVALLTRLLVPAPSLAVVL
VAPLVGVLSDRIGRRGLLLWGIALFTLAGSAGLLLPGLESILASRLILGVAVAAIMTTQTALIGDYFSGA
ARAALTGLQTSARNFGGFAFISSAGLLAGLSPRLPFLIYALPLLVLPFILRSLPRPDPRAARQGAETLVT
DGHPQWRLILMGLLLFQMITNMTFFIMPTQIPFYLDALGHDGAVMTGTVLGLLTLAGGLAALAYGHLAAR
LGVTGIWALGYGAMAMGMAAIGVQAGLPAMLAGAVCIGIGFAWVLPAFVTVMLAVAPARRRGTAGGLLTT
SIFLGQVLSPFLSLPIIASIGFDGLYLGAGALLATISALALIAGVLQRRRIRARTV
>gi|56698554|ref|YP_168930.1| anti-oxidant AhpCTSA family protein [Ruegeria pomeroyi DSS-3]
MISVGDTLPDATFMVFSDKGPETVDLEPKLKGRKVVMFGLPGAFTRGCSMTHLPSFIRTRQALADKGVDE
VICVSVNDPFVMTAWGQQSGAAEAGITMLADPTAEFTKAIGLAFSAPVVGLYDRCQRFALMAEDGVVKVL
NLETEAGACKLTVGEELLEQI
>gi|56698555|ref|YP_168931.1| pyridine nucleotide-disulphide oxidoreductase family protein [Ruegeria pomeroyi DSS-3]
MSHIVVIGAGQAGASLVARLRKDGFEGEITLIGAEPVPPYQRPPLSKAYLLGEMEKERLFLRPESFYAEQ
NIALRLNARVSAIDPAAKTVSLGGEVIPYDQLALTTGSEPRRLPAAIGGDLAGVHVVRDLADIDAMAPSV
TEGARALIVGGGYIGLEAAAVCAKRGVQVTLVEMADRILQRVAAPETSAYFRALHTGHGVDIREGVGLTR
LIGAQGRVTGAVLTDGSELPVDLVVVGVGIAPATALAEAAGLVLENGIRTDAQGRTSDPSIWAAGDCASF
PYKGGRIRLESVPNAIDQAETVAQNMQGAGKDYVAQPWFWSDQYDVKLQIAGLNTGYDRVVTRPGEGQTV
SFWYYTGDQLVAVDAMNDPRAYMVGKRLIDSGKTADPAIVADPAADLKPLLKA
>gi|56698556|ref|YP_168932.1| methyltransferase, putative [Ruegeria pomeroyi DSS-3]
MRIIAGAFRGRALASVGKGDAGAHLRPTTDRVRESLFSVLTHLDVIEGAQVLDLFAGTGALGLEALSRGA
EHVTFVDDGRVAQGLITKNINLTGSLDWTTLIRRDATRLGPNPGAPCGLIFLDPPYGKGMGARALATALA
GGWVADDALIVWEESAPMPAPEGFTLHDARKYGDTHITLMWRAAPS
>gi|56698557|ref|YP_168933.1| hydantoinase/oxoprolinase family protein [Ruegeria pomeroyi DSS-3]
MTLSLGVDTGGTYTDAVLIRDERDVIATAKALTTRSDLAIGVGNAIRAVLDQAGAAPGDIGLASLSTTLA
TNALVEGQGGRVALVYIGFGEGDLDKHGLREALKGDPALVIAGGHCHTGSEAAPLDLGALQSFLVSNKGI
SGFAVAGLFATRNPEHELMVARAITEATGAPVTCSHQLSAKLNGPKRAVTAVLNARLIGMIDRLIGRAQD
TLVEIGIDAPMMVVRGDGALMSAEQARERPIETILSGPAASIVGARWLTGVSDALVSDIGGTTTDVALIR
NGRPKIDPSGAQVGGFRTMVEAVAMRTYGLGGDSQVHVIAEGLQGGVHLGPRRVLPLSLIAAEAGAVVHA
ALDAQLRAASTGEYDARFARRVLGVPADGIGPRETVLLDRLGTRVLPLSDLLRTRMEQGALTRLVDRGIV
QVSGLTPSDASHVLGRLDAWDAEAAQKGMELFARKRTGNGERLAKDGETLATMIIDQLTEQTAQTLLETA
FAEEDADFGLPPEQLARHVLTRRGLSGHRGLLALDVALNLPVVGLGASAASYYPAVGARLRCDTILPEHG
GVANAIGAVVGRVTLRRAGSVTAPAEGRYRVHLVDGPQDFGDPEQAMSLLETVLRGEAEQAARAAGAEDI
RILVNRDIRQVPVEGREVFIEAEVTVEASGRPRIAAE
>gi|56698558|ref|YP_168934.1| methionine sulfoxide reductase A [Ruegeria pomeroyi DSS-3]
MSLERAVLAGGCFWGMQDLIRKMPGVDRTRVGYTGGDVPNATYRNHGSHAEGIEIWFDPTRISFRQLLEF
FFQIHDPTTVNRQGNDLGTSYRSAIYYVDEAQKAVALDTIADVDASGLWPGRVVTEVEPVGDFWEAEENH
QDYLEKHPNGYTCHFARADWVLPKRADAAE
>gi|56698559|ref|YP_168935.1| methionine sulfoxide reductase B [Ruegeria pomeroyi DSS-3]
MTRYTKSPEAIAALSPEEFHVTQRSGTERPGTGKLLHNKEPGIYVDIVSGEPLFASSDKYESGCGWPSFT
KPIETTHVLELEDRTHGMIRTEVRSKHGDSHLGHVFPDGPRDRGGLRYCINSASLRFVHRDDMTAEGYAD
YLDQVEDIA
>gi|56698560|ref|YP_168936.1| glutathione peroxidase famly protein [Ruegeria pomeroyi DSS-3]
MVRIIFLIVLLLVGRSVQAGAVSGSFPSIDGGTLSLEEWRGQPVLVVNTASQCGFTGQYAGLQALWERYQ
SAGLVVLAVPSDDFNQELATAAEVKEFCALNYALTLPMTNILHVKGADAHPFYKAVKAETGFEPAWNFNK
VLVAPDGSIAATFGSAVKPDSARMQREIEALLN
>gi|56698561|ref|YP_168937.1| hypothetical protein SPO3743 [Ruegeria pomeroyi DSS-3]
MDLRAIAMGLAFAFMWSSAFSSARIIVADASPLFSLACRFLISGLLGVIIARAMGQTWRLTRNQWKATIV
FGICQNALYLGLNFYAMQTVEASVAAIIASTMPLLVALASWGLFGERLPALGIAGLLAGFLGVALIMGAR
IGAGVDLFGVLLCGLGALALAAATLALRGATSGGNFMMVVGLQMLVGSAVLFLATPIFETVHVTPTLPLA
LAFAYTTLVPGLTATFVWVLLLNRIGAIRAATFHFLNPVFGVAIAAALLGERLGALDAIGVAITTAGILA
VQLSRQASARKP
>gi|56698562|ref|YP_168938.1| DNA-binding protein HU [Ruegeria pomeroyi DSS-3]
MTKTQLVAALAEDMGSDKKTASAALDAVCALITREVSGGGAVTLPGVGKIYCRERPERQVRNPATGETFT
KAADKVVKMTIAKALKDSVNG
>gi|56698563|ref|YP_168939.1| AMP nucleosidase [Ruegeria pomeroyi DSS-3]
MTQLITPPTPEPAPFTDAAQAVARLEELYSQATGFLCESFTTAMQGTEPGARYRAYYPEIRFSTSSYAQV
DSRLSFGHVSHPGTHATTVTRPDLFRSYLTQQIGLLIRNHGQPVQIGPSSTPIPLHFAVANAPDLVVPHE
GAAGFTLRDVFDVPDLATTNDDIVNGTHVSEDGAGPLSLFTAQRVDYSLARLAHYTATDAAHFQNHILFT
NYQFYVSEFEAYARAQLADPASGYTSFVSTGNVEITDPDTQIETLAKLPQMPSYHLKRADGSGITLVNIG
VGPSNAKTATDHIAVLRPHAWLMVGHCAGLRNTQALGDFVLAHAYLREDHVLDDDLPVWVPIPALAEIQI
ALEQAVAEVTELSGYDLKRIMRTGTVATIDNRNWELRDQSGPVQRLSQSRAIALDMESATIAANGYRFRV
PYGTLLCVSDKPLHGELKLPGMASTFYTTQVSRHLRIGIRAMETLRGMPLERLHSRKLRSFDETAFL
>gi|56698564|ref|YP_168940.1| adenine deaminase [Ruegeria pomeroyi DSS-3]
MAPRLVAVAAGREPADMIIRNGTWINVHTREALPGHSIAIAEGRIAFVGPDASHCSGPDTRIIEANGRYM
IPGLCDGHMHIESGMLTPAEFAAAVIPHGTTTMFTDPHEIANVLGLAGVRMMHDEALMQPVNIFTQMPSC
APSAPGLETTGYEITPEDVAEAMTWPGIIGLGEMMNFPGVTNADPKMLAEIAATQRAGKTVGGHYASPDL
GPAFAAYVAGGPADDHEGTCEADAIARVRQGMRSMMRLGSAWYDVETQITAVTEKGLDPRNFILCTDDCH
SATLVNDGHMNRVVRHAIACGCDPLIALQMATINTATHFGLERELGSTAPGRRADVILTSDLRDLPIELV
IARGQVVAENGKIAVDCPHYDWPDTARGTVHLGHALSARDFEIAAPTGANRVRANVIGVVENQAPTKALK
AELPVREGLVETAEHPDDVCQIALVERHRATGGVTNAFVSGFGYQGRMAMASTVAHDSHHMIVVGTDREQ
MALAANRLAEVGGGITIWRDGQELALVELPIAGLMSDSPAAEVAAKAQAMVEAMAACGCTLNNAYMQHSL
LALVVIPELRISDLGLIDVRSFERIDLLEPLA
>gi|56698565|ref|YP_168941.1| hypothetical protein SPO3747 [Ruegeria pomeroyi DSS-3]
MDYDKIDADGFGRSLKGIGLNLLVRDVPAQCAFLEAVFAMRSHQVTADFAIVSYGNQVFQLHSDGTYHAN
PLLGLLPENPPRGAGIEIRLYDSDPDRAVARAVAFGATVLQAPADKPHGLREAYILCDNGYAWVPSRPKD
SA
>gi|56698566|ref|YP_168942.1| LysR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MQNPLPPLGWLRTFEAAARHLSFTGAARDLNMTQSAVSQQIKALESHLRQPLFHRRPRALELTEAGITYL
PVVREAFRTLIRGTRAVTGDNQNTVQVQCNITFAVNWLGPRLPRFRALHPDVHLNIFTELWEPREMAEGA
AVEIRYSLRPADTVRTELLRSEQYYPVCAPGYQVTLETLVGQPLYDCSNLLSNWATWAEEQALNWPDPPI
TYATTYMVGLSVAMAGGGLCLAHDTIAGSLIEQGRLIAPFAHRAAMPEAYYLLLSPQAEETPGAVAFANW
IRAEIAREVG
>gi|56698567|ref|YP_168943.1| hypothetical protein SPO3749 [Ruegeria pomeroyi DSS-3]
MSVTSLRPNIDHWQERVDLAASFRWIERLNMHEGVANHFSLAVNPEGTQFLMNPNQMHFARIRASDLLLL
DANDPRTMEMPGAPDPTAWGLHGSIHRHCPHARCVMHVHSIFATVLASLADSTLPPIDQNTAIFYNRYVI
DDEFGGLAFESEGERCASMLNDPKKRVMIMGNHGVLVIGSDVGDTLNRLYYFERAAETYIRALQTGRPLR
VLSDEIAEKTAQELDDYPGQSEAHLREVKAVLDGEGSTYAS
>gi|56698568|ref|YP_168944.1| hypothetical protein SPO3750 [Ruegeria pomeroyi DSS-3]
MALVQRRGKTMTDFSQDAEAARWNYRPENPVGLNPLFSWPPRPAAVLRWYRGAWLQLTSLTLCLVLAVAA
YTWFLPPLEAMQSFAPGWMFRVWLLNMVPQIMVAGGLHWWFYMRKGQGMYKKFDRRDLTRDNGTFTFRNQ
LWDNIWWTLGSAMTVCTVYQWLIYWVMANGWVPTVTWAQAPVWFVVWMFFIPMWSGLHFYWVHRLEHHPK
LYKHVHAVHHRNVNIGPWSGISNHWYENILYFTTYFIHLLVPSHPLHLLFHIYFQQVSPILSHSGFEKIK
TGETEAAKTGDFFHQLHHRYFECNYGTSEIPFDKWFGTFHDGSAEATTRTRAYKKQMYT
>gi|56698569|ref|YP_168945.1| ExsB [Ruegeria pomeroyi DSS-3]
MKTLVICSGGLDSVSLAHKVAAEHDLIGLISFDYGQRHRKELDFAARAATRLGVPHDLIDMRQIGAHLSG
SALTDDVDVPDGHYAEDTMKITVVPNRNAIMLAIAFGIAAAKQADAVATAVHGGDHFIYPDCRPGFTQAF
EAMQAQALDGYASVRLYTPFVHEPKSAIVTEGERHNTPFADTWSCYKGGEVHCGRCGTCVERREAFHLAG
VADPTPYADPEFWRAAVEGR
>gi|56698724|ref|YP_168946.1| 6-pyruvoyl tetrahydropterin synthase, putative [Ruegeria pomeroyi DSS-3]
MYRITKEFHFSASHQLCHLPDDHPCARLHGHNYIVEVELAAAELDANGFVRDYRELKPLKTWIDDALDHR
HLNEVFGHDMVTSERLAKEVYEFCKARWAETSAVRVSETPKTWAEYRP
>gi|56698570|ref|YP_168947.1| radical SAM domain-containing protein [Ruegeria pomeroyi DSS-3]
MTTLRIAEIFGPTIQGEGAVIGAPTVFVRAGGCDYRCSWCDSLHAVDSAYRDTWTAMTTEQVWAEVARLS
GGVPLTVSLSGGNPAIQDFGPLIEMGKAQGYRFALETQGSVARGWFRELSPLILSPKPPSSGETVDWDRF
ADCIARARDAVTVIKIVVFDEADYLWAREVAARFPNLPIYLQPGNHTPPPPDAEDAAIDMDGIMARYEWL
IGRALSDRWFTPTILPQLHVLVWGNKRGV
>gi|56698571|ref|YP_168948.1| 7-cyano-7-deazaguanine reductase [Ruegeria pomeroyi DSS-3]
MANQDIYANLTQLGGKTELPNSPEEAVLEKVPNPQAGTDYAVRFTAPEFTSLCPLTAQPDFAHIVIDYVP
GDWLVESKSLKLYLGSFRNHGAFHEDCSVSIGKRLVELLAPKWLRVGAYWYPRGGIPIDVFYQTGPELPG
VWIPDQGVPTYRGRG
>gi|56698572|ref|YP_168949.1| hypothetical protein SPO3754 [Ruegeria pomeroyi DSS-3]
MLRPRAMCKRWIDALDSNPLLGLQLCMSIKTPDLDAAYGLQSPEDNRQLYAEWAGDYDDGFAAREDYQLP
AHTARAFVAAGGQGPVLDVGAGTGLCGAILAGLGVGPIDAADISAEMLERAMRKDIYRDAIETDLNQGIP
APRESYSGIVSSGTFTHGHLGPEVFPALLRVARPGAQFAISINARHFEEKGFDLALRRMAQGQIENLKLP
QVRIYGDLAAGPHKDDLAYIALFEKS
>gi|56698573|ref|YP_168950.1| hypothetical protein SPO3755 [Ruegeria pomeroyi DSS-3]
MTGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASGAEPLLWPGEEPSLDGVTHLLISTAP
DSGGDPVLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLTPTAARGRWRVMAEQQWQAVPN
LPLHVFRLAGIYGPGRGPFSKLGKGGIRRIIKPGQVFSRIHVEDIAQVLAASMARPDPGAVYNVCDDEPV
PPQDVIAYAAELQGLPLPPAVDFDKADLTPMARSFYSENKRVRNDRIKEELGVRLKYPNYRVGLEALQAD
AET
>gi|56698574|ref|YP_168951.1| OmpA domain-containing protein [Ruegeria pomeroyi DSS-3]
MILRLALCAALAATPALAQDLSLTLPQGSRQLTERIRALDGYALPTGVHGAEGVPSVQLEGRIEKRTWRI
SVGSKTTLQVFAPLRDQILEAGFEILLDCPAESCGGFDFRFATEVVPSPDMYVAVRDYRFLSAMRGDEAL
SLLVSRNPPDAYVQLIQAFPAGSVATDPVTVEKPAAVVVPMDLAGRLQTRGRVILSGLEFATGSDALGEG
PFDTLAELAQLLSANAELRLVLVGHTDTVGGLEPNIELSRKRAGAVRARLVEEYGIPADQISADGVGYLA
PIASNLTPEGREANRRVEAVMLSQ
>gi|56698575|ref|YP_168952.1| alkylhydroperoxidase [Ruegeria pomeroyi DSS-3]
MTDQTRPTALDLPMVDPLPQETQKYFDICVEKLGMVPNVLKANAFDIAKLNAFTAMYNDLMLAPSGLSKL
EREMIAVVVSSINKCFYCLVAHGAAVRQLSGDPKLGEMLVMNYRVAPLDARQRAMLDFAAKMTTASAEIE
ESHRQALRDVGFSDRDIWDIANVAGFYNMSNRVASATAMVPNDEYHSQFR
>gi|56698576|ref|YP_168953.1| acetyltransferase [Ruegeria pomeroyi DSS-3]
MTPDWFAVVDATWPAADSRTDGTLTLREGRGGGKRVSAASASGAVSEPQIEAAEAAMRQMGQPPLFQLRP
GDEGLDAALAGRGYSIVDPVNIYACPVSQLTDLPMPRVTVFALWEPLAIMRELWAEGGIGPGRLAVMDRV
KGPKTGLLMRHQDKPGGVAFVAIHDGVAMLHALEIPPHQRRKGLGKWAMRGAAFWALDNGAHTLSVICTK
ANEGANALYRSLGMQLVGEYHYRLLQEERQTA
>gi|56698577|ref|YP_168954.1| molybdenum cofactor biosynthesis domain-containing protein [Ruegeria pomeroyi DSS-3]
MPNPTAAMLVIGDEILSGRTRDANMYYLAGELSKHGIDLKEVRVVSDDAPAIETAVKALSDGFDHVFTSG
GIGPTHDDITADCIARAFGAAIDVRADARALLEAHYAKTGLELNAARLRMARIPDGATLIDNPVSTAPGF
TLGNVHVMAGVPSVFQAMVASILPTLTGGQPLLSQTLRIDRGEGDIAATLTQLAEDFPDLTIGCYPFQIN
GAFGANVVVRGTDGVRIDAAVTRLARETAQ
>gi|56698578|ref|YP_168955.1| sugar fermentation stimulation protein A [Ruegeria pomeroyi DSS-3]
MRFQTTLVPARLIRRYKRFLADCQLEDGREVTAHCANPGSMMGLADPGTKIWLEPNDDPKKKLKFGWRLV
DHENGHFTGVDTSVPNRALKTALERRAIPSLAAYETVRPEVKYGQNSRIDFLLSGPGLADAYVEVKSVTL
CREPGLAEFPDSVTARGAKHLAELAAMAGLGHRAIMLYLVQRTDCDRFTLAADIDPAYARAFETARAQGV
EKLILTTHISPQGVEIADML
>gi|56698579|ref|YP_168956.1| methionine aminopeptidase, type I [Ruegeria pomeroyi DSS-3]
MKEHRGRLTRDGIRIYEPTDFAGMHAAGAVAARILDDIAEHVFPGQSTGEIDRIITGMVEAAGAKSATIG
YKGYEHASCISVNHVVCHGIPGDKRLGEGDILNIDVTVIVDGWFGDTSRMYVAGKLPRKAERLIQVTHDA
LFKGIEMVKPGNTFGDIGHAIQTYVEAHRMSVVRDFCGHGLGQVFHAPPNVLHYGRPGTGAVLEEGMFFT
IEPMVNLGRPETKTLADDWTAVTRDKSLSAQFEHSVGVTANGVEIFTLSPGGKFHPTYA
>gi|56698580|ref|YP_168957.1| HAD family hydrolase [Ruegeria pomeroyi DSS-3]
MRHDLVIFDCDGVLVDSEPLSNRVLSDNLARYGLNLTLEDTVSLFLGSTMTGVRDKARALGAHLPDDWVD
QVYAETYDRLRAGVPLVAGISDLLAALDARALPYCVASNGSPDKMRITLGQNGLWERFRDRMFSAHVLGT
AKPDPLLFQTAAAQFDATSPVVIEDSPSGVTAAVRAGMRCLGYVAHGDGANLRALGAEVFHDMAEVPVLL
AL
>gi|56698581|ref|YP_168958.1| iron-sulfur cluster-binding protein [Ruegeria pomeroyi DSS-3]
MSGELKDRLVARALEEGFVSCRVCRPWDVPEMPARLGAFVEAGYHGQMGWMAERMEWRGDPAALWPEARS
VIMLAESYAPDTDPMEVVGQPDRGAISVYARGKDYHDLVKKRLKRLARWLIEAGGGEVKVFVDTAPVPEK
ALGQAAGLGWQGKHTNLVSRDWGNWAFLGSVFTTLDLPSDPVGRDNCGSCSACLTACPTDAFPAPYRLDA
RRCISYLTIEHKGPVDEELRAKLGNRIYGCDDCLAACPWNKFAVAASDLRYGARPELSAPALADLARLDD
AGFREMFSGSPIKRIGRDRFVRNVLYAIGNSGLPALRPVAQDLAQDSDPTVADAARWAAAKLAMSR
>gi|56698582|ref|YP_168959.1| glutathione S-transferase family protein [Ruegeria pomeroyi DSS-3]
MARLFHVPLSPFCRKVRLLLAEKKIEVELVEERYWEGDPDFLRRNPAGKVPVIKLDGKMLAESAAICEYI
EETRPEPPLMPKDVDGRYEVRRLVCWFDDKFHNEVTSNLLYERVNKKVTGQGYPDSRNVKAGAKAIKYHL
DYMAWLLDHRRWLAGDQMTLADFAAAAHLSSLDYISDVDWNRSQVVKDWYAKIKSRPSFRSILADQVPGF
RPPPHYADLDF
>gi|56698583|ref|YP_168960.1| hypothetical protein SPO3765 [Ruegeria pomeroyi DSS-3]
MPAPLTFARLTQVDPNLITAHMRDPRLAIHMPLMPDSWSDAQTVSFVQSKEACWDRDGLGHWAFLHQDRY
VGWGGFQREGEEWDFGLVLCPAHFGLGLPIARKALDFAHADPRIPFVTFLLPPSRQHLGALRRLGAQPLG
ETDHAGHRFLKFRLDTA
>gi|56698584|ref|YP_168961.1| monofunctional biosynthetic peptidoglycan transglycosylase [Ruegeria pomeroyi DSS-3]
MAKRTTNTRKKKARKADTKLRPGRWVLRWVSRAFAAGFAALLVLVLLFSMINPPITHTIWSEYSRLGKVE
RDWVPLEEIAPVMARSVVAAEDANFCLHWGFDVNAIRAAIDEGSGRGASTLSQQVVKNVYLWQGRSWIRK
ALETAITPLVELTWSKRRIVEVYLNVAEMDEGVFGVAAAADRYFGVSPDKLSAQQAARIAAVLPNPRGRS
ASDPSPRLRKRAAAIMDGAATIAADGRSDCFE
>gi|56698585|ref|YP_168962.1| hypothetical protein SPO3767 [Ruegeria pomeroyi DSS-3]
MRGEQTRKTGQGRDMANITLIAQNVNGDPFVNGGTINIVNNSTSVLTFVDVDTQLNDPLSGEYVSFDGGV
TLLSYQYLGVGDVRGDPGQRASFIRIDLGDGSFMTVALDMNADFDDVPDLQNGNTQLTLETLDTTSTNWF
PGFACFAAGTFIEIESGPIPVETLRPGDLVQTLDNGLQPLLQLAKTTVRGDGALAPVLFRAGVLGNFRDL
YVSQQHRMLITGWQAELACGESEVFVPARMLVNGSTIRIAPRHKLTYYHLLFARHEIVFSEGIPTESYFP
GAIEAPEDGADEDAEAALFQELAITGGAGWQTARRVAKSAEAQLLLAA
>gi|56698586|ref|YP_168963.1| glutamate synthase, large subunit [Ruegeria pomeroyi DSS-3]
MTKYDADWVRAEEAKRKWLAENGLYSEEEEHSSCGVGLVVSVNGKRSRKVVEAGIDALKAVWHRGAVDAD
GKTGDGAGIHVQIPVPFFYDQIRRTGHEPRMNELVAVGQVFLPRTDFGAQERCRTIVETEILRMGYFIYG
WRHVPVDVTCLGEKANATRPEIEQILISNSKGVDEETFERELYVIRRRIEKAAQAAGIAGLYLASLSCRS
IIYKGMMLAEQVAVFYPDLMDERFESAFAIYHQRYSTNTFPQWWLAQPFRMLAHNGEINTLKGNLNWMKS
HEIRMASSYFGEKAEDIKPIVPGGSSDSAALDAVFEVLVRAGRNAPMAKTMLVPESWSKQAVELPQAWVD
MYSYCNSVIEPWDGPAALAMTDGRWVCGGLDRNGLRPMRYVVTGDGLLIAGSEAGMVPTDEATVVEKGAL
GPGQMIAVDMAKGKLYHDRALKDKLAASRPFGDWVGKINNLEDQLGDVEETPLFTGAELRKRQIAAGYSV
EELEQVLAPMAEDGKEALASMGDDTPAAVLSKQYRPLSHFFRQNFSQVTNPPIDSLREYRVMSLKTRFGN
LKNVLDEDSSQTEIIVAESPFVGNAQWETLKKNFNAPLVEIDCSFEQGSAGLGAALARIRSEAEEAVSSG
AGHLLLTDQYSGPGKVAMPMILATSAVHSHLTRKGLRTFCSLNVRSAECIDPHYFAVLIGCGATVVNAYL
AEDSIADRIKRGLLDGSLTENIARYREAIDQGLLKIMAKMGISVVSSYRGGLNFEAVGLSRAMVAEFFPG
MTSRISGIGIKGIQTKAEEIHARGWDSGLDVLPHRGFYKARKSGETHAWEATSMHMMQMACNRASFELWK
QYSAKMQSNPPIHLRDLLDIKPLGKPVPIEEVESITSIRKRFVTPGMSLGALSPEAHKTLNVAMNRIGAK
SDSGEGGEDPAHFVPESNGDNPSAKIKQVASGRFGVTAEYLNHCEELEIKVAQGAKPGEGGQLPGMKVTD
LIARLRHSTKGVTLISPPPHHDIYSIEDLAQLIYDLKQINPRAKVTVKLVASSGVGTIAAGVAKAKADII
LISGGNGGTGASPATSIKFAGLPWEMGLTEAHQVLSMNNLRDRITLRTDGGLRTGRDIVMAAMMGAEEYG
IGTAALIAMGCIMVRQCQSNTCPVGVCTQDESLRAKFTGNADKVVNLITFYAQEVREILASIGARSLDEV
IGRADLLAQVSRGSAHLDDLDLNPLLITVDGAQNIVYDRAKPRNVVPDTLDAEIVRDAARFLEDGEKMQL
SYSVQNTHRTVGTRVSSHIVKRFGMRNDLQPDHLHIKLRGSAGQSLGAFAAPGLKIEVSGDANDYVGKGL
SGGTIVVRQPQVSPLKADENTIIGNTVLYGATDGHLFAAGRAGERFAVRNSGAKVVIEGCGTNGCEYMTG
GVAVILGGIGANFGAGMTGGMAYLYDPDGQAQLLMNMETLVTCPVSVAHWEAQLKELVERHAEETRSAKA
AHILQHWDIEKGNFLQVCPKEMLNKLPRPLSHDSLAMPAE
>gi|56698587|ref|YP_168964.1| hypothetical protein SPO3769 [Ruegeria pomeroyi DSS-3]
MTELHGECMCGAVTITATPARAALGACHCDMCRRWTSSAYVSFPVEPGYAALGPVKVYGSSDWAERAFCG
TCGSVLWYRITLPGKMHGQTQMAAGLFENAGGNALKLELYIDKKPEGYAFAGERRQMTQAEVEAMYAPSD
LGDSQ
>gi|56698588|ref|YP_168965.1| putative oxidoreductase [Ruegeria pomeroyi DSS-3]
MAKQPMLKFVQIERDMPEKRAADARKEDFHEIYAEYAAVKAAEQASRCSQCGVPYCQTHCPLHNNIPDWL
RLTATGRLQEAYETSQATNTFPEICGRICPQDRLCEGNCVIEQSGHGTVTIGAVEKYITDTAWDMGWVKP
ASPVAERSESVGIIGAGPGGLAAADMLRQAGVQVTVYDRYDRAGGLLMYGIPGFKLEKEVVERRNRLLAD
GGVRFELNCDVDAAKFAELRAAHDAVIIATGVYKSRDLSMPGSGLGGIEKAIDYLAASNRKSFGDEVADF
DNGRLNAEGKRVVVIGGGDTAMDCVRTAIRQGAVSVKCFYRRDRANMPGSQRETQNAEEEGVVFEWLSAP
KGFTGDDKVAGVMVQKMRLGQPDASGRQSPEVIEGADYVEEADLVIKALGFEPEDLPTLFGQPDLPVTRW
GTVKAAFRTGATEMEGIYAVGDIVRGASLVVWAIRDGRDCAEAILEGFGAKTAMAAE
>gi|56698589|ref|YP_168966.1| undecaprenol kinase, putative [Ruegeria pomeroyi DSS-3]
MSLFHLILVALIQGITEFLPVSSSGHLILLPALTGLEDQGQVIDVAVHVGTLGAVVLYFWRDVRDGLAGL
PRALTGRLDTPGARLAMGLIVATIPTVLAGAALHFTGLSDALRSITVIGWTMLLFGLLLWWADRTGAQVK
EATDWSLRDALILGLWQAVALIPGTSRSGITITGARAMGYTRSDGARISMLMSIPTIIASGVLLGADVAV
TSDAQAARDGAIAAAFAFVSALLALSLMMRLLRSVSFTPYVIYRLALGLVLLGIAYS
>gi|56698590|ref|YP_168967.1| NADH ubiquinone oxidoreductase, putative [Ruegeria pomeroyi DSS-3]
MSKLVTIYGGSGFVGRYIARRMAKEGWRVRVAVRRPNEAMHVKPYGAVGQVEPVLCNLRDDNSVAQTMRG
ADAVVNCVGVLNELGRNSFDAVQAEGAERIARIAAEQGVARMVHVSAIGADGDSDSAYSRSKALGEAGVL
RHMPDAMILRPSVIFGTEDQFFNRFAGMTRFGPFLPVVGAETRFQPVYVDDVARAAVKGVLGQAPGGVYE
LGGPDVETFRALMQRMLGVIHRKRIIIALPFFAARIMAGMLDVAKFVSFQLFPNNILTRDQLKNLRRDNV
VSEGAKGFADLGIAPEPMDTVLPAYLWKFRPNGQYDEIQASAKNLRA
>gi|56698591|ref|YP_168968.1| oligopeptide/dipeptide ABC transporter, periplasmic substrate-binding protein [Ruegeria pomeroyi DSS-3]
MKKQLATAIAAAMLTVSVAPAVYAEVTVKVAYDADPVSLDPHEQLSGGTLQLSHMVFDPLVRWTQDLQFE
PRLAESWEQVDALTTRFHLRDGVTFHSGNELSSADVKWTFDRLKTSPDFKGIFAQFSEVKVIDEDTFDLI
TTEPYPLVLHTATYIFPMDSKFYSGTTADGKDKAELVKHGDSFASRNVSGTGPFIVTAREQGVKVEFERF
GGYWDTASKGNVDKIVLTPIKEDPTRVAALLSGDVDFIAPVPPTDLKRVEEAEGVNLITMPGTRIITFQM
NQNRVEAFKDKRVRLAIDYAVNNAGIVDRIMRGFGTVGAQASPAGYLGYDAGLTPRFDLEKAKALMAEAG
YADGFSITMMAPNNRYVNDDKIAQAVASMLSKINIKVDLQTMPKAQYWPKFDERAADMMMIGWHSDTEDS
ANFHQFLSACPDEATGNGQYNSGNYCNPEADKLMNASNSETDVEKRGNMLRQLEGILYEEAAFVPLHWQN
LAWGARSGVHAEAIVNALDFPYFGDLVVD
>gi|56698592|ref|YP_168969.1| oligopeptide/dipeptide ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MLAYLVKRVFQAIAVMFVISLVGFAIQDNLGDPLRELVGQSVSEEVRQQLRDELGLNDSFLQQYIRFLGN
ALQGDLGTSYFFKEPALDVILKKLPATLELVAGATLIIVGLSVPLGVYTAIRPNAIFSRIVMGVSIVGIS
IPVFLTAILMIYLFSVTYGWFPSYGRGDVVHVFGYWDTNFATLDGWMHIILPSIALASIMLPLFVRLIRA
EMMEVLQSEYVKYARAKGIRPWRIYFVHALKNTLLPVITVGGVQIGTMVAYTILTETVFQWPGMGFMFLE
AVNRVDTPLIVAYLIVVGFIFVVTNTIVDLIYGLVNPTVNLARMGA
>gi|56698593|ref|YP_168970.1| oligopeptide/dipeptide ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MSSLTTNPEPSRWSRIWNSNMGYSFRRNPVAMVSLAIFLVIAVMAFFAPLIAPFDPYDPAQIDIMNSEYP
PVWVDGSDPQFVFGTDDQGRDLWSTILYGTRLSLLIGVCAVALQAFLGISIGLIAGYVGGRIDSLLMRLA
DIQLSFSTLMVAIIFLAVTQAMFGSETFNQYAIYFLIAVIGVAEWPQYARTVRATVLAEKKKEYVDSARV
LGFSPMRIMVRHILPNSLSPIFVISTVQVANAIISEASLSFLGLGMPPSQPSLGSLISSGFDYIFSGSWW
ITAIPGVVLVVLVLVINLLGDWMRDVLNPKLYKG
>gi|56698594|ref|YP_168971.1| oligopeptide/dipeptide ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MSSTPNFTRGKTMSLLSVRDLTVKFAMRDNTVTALNKISFDLARGERLGIVGESGAGKSITGFALMNLLS
RPGFIDSGSILFEGEDMASKSEAQLQAIRGNRMAMIFQDPMVTLNPVLTIGQQMVETLMAHRRLSRAEAE
EISILKLREVYIPSPEERLKQYPHELSGGMRQRIIIAIALLLDPQLIIADEPTTALDVTIQADIMELLLE
LCQSNKVGLILITHDLGVVSQMTERTLVMYAGRIIEAGRTREIINDPQHPYTQGLINALPQQTRPGHRLK
QIPGNMPSLTAIPPGCPFSPRCEYAVDRCRVELPEPVRYDHVEVACHEVNRLQKPVAEEQSA
>gi|56698595|ref|YP_168972.1| oligopeptide/dipeptide ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MKDMTSQPLLELKNLEKRFLLDHGFLETVKLRGGKLIRERRQVHAVNNVSLSAQRGEALCVVGESGCGKS
TVARLVAGLLEPSGGEIHYSGERIDNRSRQANMALRKKMQMIFQNPYASLNPRMTIRQALEEPVRYHNPS
MSRAEIRDKVAEVMRSVGVDPSWSGRYPHEFSGGQRQRIAIARALTVDPEFVIADEPISALDVSIQAQVL
NLMLEAKDERGLTYLFITHDLSVVQHFGTRVAVLYLGTVCELADTATLFENPKHPYTRALLSAVPQLKDD
RPNHIRLKGEIPTPINLPKGCPFQSRCAYADQRCKVDLPRPQQQPDGSLVACHAVEEGRLGD
>gi|56698596|ref|YP_168973.1| LysR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MDIAWLKDFEALVAQRNFSRAAEERNVSQPAFSRRIRSLEEEIGARLINRQTLPLSLTPAGEVFLAQARL
MLRTFEETQERCQAIEAAGENVIRFATTQSLYMTHYKTLIAPLTEQSGFETDLNSTGWAADQFVSALQQR
YCDVILTYWHPAMDFLAPLEVSKCDFIEIAEDDFIPVSKAAPNGAPLFDLQGNRKKPLPLLSYGRASALR
SVLEHVLRQQIEPPNVLIVNQNALAHSVKAMILEGFGLGWLPRHLCAQELADGRLTLAGGSAFQTKLSVR
LYRESENEKSTLNRLWRDLSAG
>gi|56698597|ref|YP_168974.1| hypothetical protein SPO3780 [Ruegeria pomeroyi DSS-3]
MSKFDGYFLRQLLVLCGFFAFVLVGVFWISKAVSLFDRLISSGQTAMVALEFTALTLPTLVRTVMPMAAF
CATVYVTNRLNRESEMTVMLATGSSPFRLARPVILFGLVCAAMLATITLYLRPAAMLRLEARQAEVAGDM
TAQLLNDGQFMHPVKGVTVYIGKIDRDGTLNDVYLSDRRAPERVVTYTSSKAFLARSGEQIALVMVEGTA
LQMETGRRTLSTTVFRDFSYDISALAKRDIERRQDIRGMPTLALATAFDGEGLAETYSRGEISEELQERL
SWIGVSVAVTLIGFSTLMLGTFSRFGLWPQLIAAFAGLIALEGMRSTATAFVGSHPGLWWVQHAPALGGI
ALSILFLKLAGRPLRLRRYPDTGSV
>gi|56698598|ref|YP_168975.1| hypothetical protein SPO3781 [Ruegeria pomeroyi DSS-3]
MKPLICELGMGADVHGHDYTKAALRGVSDAIRHSSLTLFYAYKHPSQMRVEVTVGVPEPEKVDKKAVAAA
LPFGAVEVTVVQGGLNDLGMGGAEDIVLAAVAVKAWLDTTDHPFRLAEGLETLLG
>gi|56698599|ref|YP_168976.1| hypothetical protein SPO3782 [Ruegeria pomeroyi DSS-3]
MPKTQFAVQMGMGTDLKGQDYTKAAARAVHDALHRNFLTAGAAFDLPLDRMIVDIRVGVGRPEAVDLEVV
KSEAPVGRVTVEAVQGGLDIEMMGHTTLIANAIVCASWDVEIAQ
>gi|56698600|ref|YP_168977.1| sugar ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MDAIRITDVVKRYPEFTLGPINMSVGQGEFFGIFGPPSTGKTSVLKLILGLLTPDEGQVEIAGRDAAEME
VSARGISMVFQNLALFPHMTGRENIIFPLKERGASEAEIAERLDLVSEVLHVSHILHKNPAQMSGGERQR
IALGRAFAAQSRAMLLDEPIAALDARLREEMRVELKRLQRENNQTFVYVSHDEEEVMAISDRVAVIVGGR
IAQIGTPEEVYNEPCSLAVAEVIGSPPMNFFEGRFSAEGLRFESDVLETDIQVVCTTQKGGAGTLGVRPE
DIWLGESEGNPSFKVRVSTVEPLGGYTIINARIGKQIIKIRAPGQVALEEDAWQSVSLDARRLHLFCAKG
SRL
>gi|56698601|ref|YP_168978.1| sugar ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MPPRALPTWPGNRGKGMSSIQINNVTKRFGDFTAVRDLSIDIEEGEFVALLGPSGCGKTTTMNMIAGLEE
PSEGEILFDGKDLSSLRIQDRNIGFVFQNYAIFTHLSVFKNLSYGLEVKKVPKPEIERRVQAMADRMSIS
HRLDQPASSLSVNEMQKLAIGRSAIVEPRIFLLDEPLSNLDAGFRAYMRAELKVLQHEFGQTMIYVTHDQ
IEAMSLADKIAIIDQGKLMQYGAPLDIYNDPQNRFVANFVGSPRMNLVDGELREERGALHLMLHGGAEIP
LSGKVRADFTRDGSVHGGSFGVRPQDIYFGDKRGSNDIAMHGKVEVLERVGPKRLAYLQVQDTLFLAFDD
LDRLRVGDEVPFYLPSDKSLAFDMKTGRRLGGA
>gi|56698602|ref|YP_168979.1| sugar ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MTDHTLTDRQPTDASRGYWQRVARDGDKMGFWFILPTFLLLLFIVIFPLFMQLYLSVTWWTPLEGIPWYS
AWEVFNWGENYWFLATDPRFWGALWRTALIMIVAVPAQFLLGMALAYLFIDTFPGRKIFYSILLTPMMIV
PAVVGLMFFLLFQGTGPVNAHLGLPAEFSWLTDVNRAMISVIIADIWQWTPLMFLILLAGMLGVPSDQLL
AARLLGGSNWQNFVKIILPRMKTVIIIALVLRAVECFKIFDLVYIMTKGGPGVQTETISVFLYKQTFGEL
EWSYVAAIGLTILIVLSVIAAKGLAYMARKQG
>gi|56698603|ref|YP_168980.1| sugar ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MKPSPGALALKYLFVLLACAVVLYPLLWMVTMAFKPYPEWTTVAGLTWLPKEPTWQNFEFIFYGQAEGLV
VSLDRTITGPLVASLVTSICGTLLAVVCGTLSSYAVVRFGMAQSLPLSVLQLRLFPPLAVMIPVMVMWAF
IGAVDTWWGLSLIYGIVTLPFAFWLMKTFFEEVPVEIEDAARVSGCSYWRVFYRITLPIVKPGLATCALF
VFILNWSDYLLALLLTQKEWVTLPVYMATLTSAMGGQMYGMKAALGVIAAIPPVVFGLMIQKHLVRGLTF
GALKQ
>gi|56698604|ref|YP_168981.1| sugar ABC transporter, periplasmic sugar-binding protein [Ruegeria pomeroyi DSS-3]
MPIREERMKNSSQIMTNPTRRAFLQNSSAAAAAAGFGGIGSFIASPVFASDYAPGMTGGPTGFEGAERFQ
YNNTMSEGRAIEGIKALQAAGNAPAKISMLLTDGAIGQITKPFPEGGPSAKEVWERETGIEIDIVGAPAE
DIFKKVMQDVTTGGGTFDIYTGPWNSTGDLVSSGGAVNCSDFVAKYQPDWADPERGTPTPEMEKLLYTYA
GDYYSFSLDGDFQTWFYLKGLYEDPRVQDAFLSETGVALKTPDTWEEVDRISKFFTGKDFGNGPMYGNGN
LMSPFWGLATFYARFASMDFPNYHFFDEDGNPNLNSDLGIQCAEEHVRSFEWCPPDALTFTWAEAYATMW
NLQIPHTAIYTNLVKFGDGYNADGTPKSKATGMIGSHLPVGRRFGDQLNRRSVLYYHITAWISSQSQHPE
AVYLFLQWLSSTRTYTWMAGNPGGYFDPMQQANFKEPLVASTYHPYAMETIPQTIARSVPSINFAGQTAL
DNALDEEIQAAITGQKSAREAMDAAQSKWERIIKRQKRNGIVDAIKASRATWPTIVDPA
>gi|56698605|ref|YP_168982.1| acetoin catabolism regulatory protein [Ruegeria pomeroyi DSS-3]
MDQSIAFARHVQEIVSAAEGKQTTRDPEVVQSWLRCLNDYKLDPEHKGEARILPQNILRQHQQEAEDLMT
IARFGMEDLYRRVNSMGYVLLLTDAKGVTVDFIGDEKVDRELKRAGLYIGSEWSEQNAGTCGVGACLTSG
EAIVVHQTDHFDMAHTPLSCTAAPIYHSDGSLIGVLDVSLLMSPTEKYSQALTLEVVKSCVRRIELANLM
NSRKSDWILRLNRTSEFLGVDPSCAISVASDGTISGLTHGAHQLFSKAQGVRKFSAQSFVGKPFEEVFDF
DFNDIPCLLAAETPGEQALELSDGQVIFADVQAPLRRERAPARSVLPKPLAGIHGGDASMQILAEKAARI
VDKQISIILEGETGVGKEYVAKALHASRKKKGPFVAINCAALPEALIESELFGYAPNSFTGANAKGKKGL
IEQANGGTLFLDEIGDMPLVLQARLLRVLAEKEVMPVGATKPVPVDIRVISASHRKLKSLVDAGQFRQDL
YYRLNGVVLSIPALRDRTDKPWVIRQIAALVSEGSVMRFSKPAEEALLAHDWPGNIREMINVFELCLALS
NDGVVGIEDLPENLIPQ
>gi|56698606|ref|YP_168983.1| alkylhydroperoxidase-like protein [Ruegeria pomeroyi DSS-3]
MSVQKEKLAQANKRLMGLFKADQKTMMAFKTLSDTAVREAQVSTAMKEMIAVAIAAARGCEDCILYHVNE
AKSHGAERGTLVEVLAVAIEMSGGPGTVYAAKALDAFDQL
>gi|56698607|ref|YP_168984.1| branched-chain alpha-keto acid dehydrogenase subunit E2 [Ruegeria pomeroyi DSS-3]
MSDLITPILMPKWGLSMREGTLAAWHVEEGTEISPGDEIMDVETDKIANVVEAADGGLLRRRVGQAGEVY
PVRALLGVLAPESVSDAEVDAYVDAFEMPQIEEEEDTGPAHEFADLGVGRIRYITREGEGVPVILIHGFG
GDLDNWLFNIDALAEKAPVHALDLPGHGQSVKTVDDPGLGTMVDAVVQLMDHLNIDKAHLVGHSMGGLVS
GQVAIEHPGRVASLSLICSAGLGDEINAGYIDGFVGAASRRDLKPVLKDLFADQSLVSRAMVDDLLKYKR
LDGVQSFLEALRGNLFAGGRQAAGIAAALAGFNGPIQVIWGADDAVIPQSHANAIADASVTVVEGAGHMV
QMENASRVNELISHHL
>gi|56698608|ref|YP_168985.1| acetoin dehydrogenase complex, E1 component, beta subunit [Ruegeria pomeroyi DSS-3]
MARTLSMKDAINEALDQEMTRDPTVIMMGEDIVGGAGAAGEDDAWGGVLGVSKGLYHKHPKQMIDTPLSE
SAYVGAAIGAATCGLRPVAELMFIDFMGVCLDQIYNQAAKFRYMFGGKAETPVVIRAMCGAGFRAAAQHS
QMLTPIFTHIPGLKVVCPSNAYDTKGLLIQAIRDNDPVIFLEHKNLYASECDVPEEPYAIPFGEANIARE
GSDVTIVTYGLMVPNSLAAAETLKKEGIDVEVIDLRTLSPIDMDTVIESVENTGRLVCVDEANPRCSIAT
DVSASVAQDAFKALKAPIAMVTAPHAPVPFSPALEDLYIPSPDRIAAAVRKTMGA
>gi|56698609|ref|YP_168986.1| acetoin dehydrogenase complex, E1 component, alpha subunit [Ruegeria pomeroyi DSS-3]
MSNPFPLEKDGLLEAYRRMKTIREFEERLHVDFGRGDIPGFVHLYAGEEAAGVGIMMHLKDLDRIASTHR
GHGHCIAKGVDVKGMMAEIYGKSTGSCAGKGGSMHIADLSKGMMGANGILGAGAPLVCGAALAAQKLGHD
GVGITFFGDGASNQGTVLESMNLAAIWNLPAIFVVENNGYAESTSVDYAVASDSYVDRATGFGMPGITVD
GTDFFAVYEAAGEVVKRAREGGGPTLLECKMIRFFGHFEGDAQTYRAPGENEDNRKNRDCLKIFRAKVTE
AGVLTNAELDAIDAEVATLIEDAVREAKAAPLPTPAELTTDVYVSY
>gi|56698610|ref|YP_168987.1| acetoin catabolism protein X [Ruegeria pomeroyi DSS-3]
MTKVGIIANPVSARDIRRIVSHAGNLPINDRANIVLRMLTGLMATGVEEVVIMPENGGIRTQLMRTIDRE
ARMGHLRFPRVSYLDMPVTCTSDDSAEAARQMHDQGVGAIVVLGGDGTNRVVVSRCGNTPIAGVSTGTNN
AFPELREPTITGLAVGLAVTGQVPCDHAYSYNKRLEVRVNDQREIALVDVAVVSERFIGARAIWKTANFR
DLFVTFGRPDGIGMSSIIGLLAPLDRQTPEGRRARLLPLETAKTRLVAPIAPGLIEEVGIGGVEKVLPDT
VYLPSVSAGSFALDGERELTFSETCDVSIRLQTDAFRTVNVPDCMAYAARHGLLTRAASEALRSAHQTGR
TT
>gi|56698611|ref|YP_168988.1| hypothetical protein SPO3794 [Ruegeria pomeroyi DSS-3]
MPFHKNADQHGRWKHTELTIDAIKGIGGMFSLENGSGRRFLTRSDICLTE
>gi|56698612|ref|YP_168989.1| RNA polymerase sigma-54 factor [Ruegeria pomeroyi DSS-3]
MPQFQRQIQTQAQKLALTQAMRASLSLLSMDADEAAEAIRREQSRNSFLRTVPPPLPGGGGAADQPEIAH
MESGTEDLLRQVALIRMTTRQNQLAQDLVHSLDERGFLPDSPEETASYLQCSPAELSALVPILQDAVEPA
GVFAWSLADSFRLQLQAKNRFDPLIERLLCRLDLIARQDIDGICKACDVDREDAIEMLEDIRSLNPSPLF
RQSHPIQASGEPELIIKTAPDGTCTASLNEAALPRLLTDDALFSSTMAAETDAHAQSYYRDCYRGAANMV
RAMQKRANTLLSAGQTIADRQHKFIRSGRLRDKQPLTMTLIAQEAGLNKSTISRALSNCRIRLDSGIFPA
EHFLARPLSDDTPDRTRDQVLQRLRLLIETENPRSPMSDQVLARQLGKARLSISRRTVAKYRQFLQIPGA
YERKRNT
>gi|56698613|ref|YP_168990.1| hypothetical protein SPO3802 [Ruegeria pomeroyi DSS-3]
MGSASGGSNRMTETDLRAFTNDLALATDGTGALDALCRFAQSLLPARLFTITLIDLDAGQALRVYSNMPQ
SYPVSGRKPVTRDVWFQQVIEGQHSFVANSGAEIAAVFPDQPLIASLGCDAVVNLPVVLGGRTVATVNLL
DRAQSYPAMVLARIETELRLPAMATLAVYYMLEGSAPDR
>gi|56698614|ref|YP_168991.1| AraC family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MRRPDTASLATVSQPFIEDWLSALRRCCAKAEMAGFLDRSGLGAIHDQPGARVTLDQIVRLYKIAAVETG
DEMTGLWSRPIRHRALQHLLATVRESGSLPSALHRFSTFWNLLLDDFQFELHTGVAQIDLVLLPLGDGPV
QRFGHMLILKLAHGLLSWLAGHEVPVRAVHFAFERPGFAQDYSVIFPAPVHFGASASGLSFDPAQLSPPQ
ARSSAEMDAFLARAPRDWIFTSYHEHSQSLRVRAFLFRSDWVGCSLSDAAQALGMSRRTLTRRMEEDGTS
FQAIKDALRRDIAIRDLREGRKSIEEISQDVGFSSAANFHRAFRRWTGSTPRSYRSGADPSNM
>gi|56698615|ref|YP_168992.1| acyl-CoA dehydrogenase family protein [Ruegeria pomeroyi DSS-3]
MTYQAPVRDIMFAIEHLSQWPQVEALQTYSEIELDDARAALEEFGRFCGEMIAPLSTIGDTEGARLENGR
VVLPEGYKTAYDQFVDMGWQSLSHPAEHGGMGLPKVVGAAATEIVNSADMSFGLCPLLTNGAIDALSITG
SDAQKAFYLDKLITGRWSGTMNLTEPQAGSDLSRVRCTAVPQDDGTYAISGTKIFITFGEHDLSENIVHL
VLARTPDAPEGVRGLSLFVVPKLLAGEGGETSQRNTLGCVSLEHKLGVRASPTAVMEYDNATGYLVGEEN
SGLRYMFIMMTSARYAVGVQGVAIAERAYQHALSYARDRIQSRPVDGSAQDAVPIIQHPDVRRMLLRMRA
LTEGGRALAIATGGWLDLAEHGPEEARAEAQSMAEFLVPLVKGFCTERAVEVASLGVQIHGGMGFIEETG
VAQFYRDARILPIYEGTTAIQANDLLGRKVLRDGGRTARRFAEMIAATEGELSKGGAAAQRIAQRLAEAR
AAFAAGLDHLLATAGQDPNRAYAGSVPFLMLTGNLATGWQLGLSALAAEAELAKGGDAEFLQAKIATADI
FAQQVLVECSAEHSRITDTGDSLLTASL
>gi|56698616|ref|YP_168993.1| enoyl-CoA hydratase [Ruegeria pomeroyi DSS-3]
MTQDVTSGYSNLDLDLRDNGVCVVTLNRPDKRNALDVATIEELVTFFSTAHRKGVRAVVLTGAGDHFCAG
LDLVEHWKADRSADDFMHVCLRWHEAFNKMEYGGVPIIAALRGAVVGGGLELASAAHLRVMDQSTYFALP
EGQRGIFTGGGATIRVSDMIGKYRMIDMILTGRVYQGQEAADLGLAQYITEGSSFDKAMELADKIASNLP
LTNFAICSAISHMQNMSGLDAAYAEAFVGGIVNTQPAARERLEAFANKTAARVRPNS
>gi|56698617|ref|YP_168994.1| SsrA-binding protein [Ruegeria pomeroyi DSS-3]
MAKKISDPNYKVIAENRRARFDYAIESDLECGIMLEGSEVKALRGGGSNIADSYAAVENGELWLVNAYIP
PYEQAKMFKHEERRRRKLLVSRKELANLWNATQRKGMTLVPLVLYFNHKGIAKMKLGIAKGKKIHDKRET
EAKRDWNRQKQRLLKDNA
>gi|56698618|ref|YP_168995.1| hypothetical protein SPO3807 [Ruegeria pomeroyi DSS-3]
MNMSPPSPFSAGQAPTQVAFDRREMAVILGLYGRMVAAGEWRDYGISMLSDMAVFSVFRRTAEHPLYRIE
KRPRLRNRQGMYAVVGMDGQVLKRGQDLTSVLRVLERKLIRVVRPD
>gi|56698619|ref|YP_168996.1| hypothetical protein SPO3808 [Ruegeria pomeroyi DSS-3]
MGGWAMLPELTSERFTTQTGWRVLVQVPEPDCPRVIAAVIAEDPLIWGDYDRVTFAAPGQQHFRSLPGGA
NTPTDDAVSVPCLELSFFLSGDAGRLDPVLHAIYRVHPYEEPVILVLPALRTNHIRGVDEGNPNRFWNRE
TADWVPDAHRRDVAGPPQSRGTVSRQA
>gi|56698620|ref|YP_168997.1| ArsR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MTLTPRLDILGAALADSSRARMLCELMDGRAYTNKELASAAGVTPQTATAHLRRLEEAGLIRATRSGRCL
YHSIAGPDVAEALETLSALAPSDHLYRVQQRKGARLKMLEARSCYDHLAGRLGVAIAQALLELGDLARDG
AQYRVVPSERWAKLGVTLTGRAPLARPCLDWTERLPHVAGPVGREVLSHALSANWLRRVRGERGLEVTPA
GAVALRQILGIRWEGGQCYQN
>gi|56698621|ref|YP_168998.1| phosphoglyceromutase [Ruegeria pomeroyi DSS-3]
MNAPKPVVLCILDGWGLSDDKTANAPYLAKTPTFDAIMTKGPHARLITHGPDVGLPSGQMGNSEVGHTNI
GAGRVVAMDLGQIDLAIEDGSFFDNAALRDFIARTRAAGGTAHLMGLVSDGGVHGHLNHIIAAAQAITNA
GVPVVMHAITDGRDVAPKSAYGFMAELEDRLPKGARIVTVTGRYFALDRDNRWERVQEAYDAMVRGEGRR
VSTAHSAIDYAYNQSESDEFITASVLTGYDGMRDGDSLFCLNFRADRAREILRAIGEPGFADFDTGARPA
LSALLGMVEYSDAHNAYMTTVFPKRDIVNTLGAWVARHGLRQFRLAETEKYPHVTFFLNGGKEEAEPGED
RFMPKSPKVATYDMQPEMSAPEVTDKFVEAIGAGYDLIVTNYANPDMVGHTGDLKAAIKACEAVDQGLSR
VIAALEQAGGAMIVTADHGNCEMMIDPETGGPHTAHTLNPVPVALVGGPAGVTLRDGRLSDLAPTVLALM
GLPKPPEMTGESLIT
>gi|56698622|ref|YP_168999.1| hypothetical protein SPO3811 [Ruegeria pomeroyi DSS-3]
MIRHAALFLALTLWSGTARAESDPAEAAQAAARMLEEASVALSEAESARDRVRALTGTVQAYEAGLAAMR
DGLRRASVREGQLATELRAREGEVAQLLGVLQTIETAPPPVLMLHPSGPLGAARSAMTLAEMTPALQARA
NALGRDLNEVRTLRTLQQNAARTLQEGLTGIQQARAELSQAIANRTDLPRRFTEDPVRTAILVSSTETLQ
GFASGLSEIAEGEIAASSADISDLKGSLPLPVQGVLLRRSGQADAAGIARSGIIVATRPRALVASPTAAT
IRYRGPLLDLGNVVILEPQPDLLIVLSGLQEVYGAAGEVIPAGTPVGLMGGAAQEIGAILSTSGDGSGTE
RSETLYIEVREGDSPVDPETWFQTDKDG
>gi|56698623|ref|YP_169000.1| carboxyl-terminal protease family protein [Ruegeria pomeroyi DSS-3]
MKKVVLAGLAGTLAGIIATTQIAGPLVAQEAKANSNVYEQLDLFGDIFERIRAQYVEEVDAGELIEAAID
GMLTSLDPHSSYLSPDDAAQMRVQTRGEFGGLGIEVTQEEGFVKVVSPIDGTPADEAGIEAGDFITHVDG
ESVLGLTLDKAVDLMRGPVGSEIVITVVREGEDEPFDVSIIRDTIKLTAVRARTEGTSVVLRVTTFNDQT
YSNLEDGLAKQVEAAGGIDKINGFVLDLRNNPGGLLTQAIKVSDAFLDSGEIVSTRGRNPEDGERFNATL
GDLAQGKPVVVLINGGSASASEIVAGALQDHRRAIVVGTKSFGKGSVQTVMPLRGDGAMRLTTARYYTPS
GRSIQALGVSPDIVVEQPRRRPEAEEERVTPRSRSEADLRGRLNNDSLSEDEIRQIEEDRAKAEATAELR
QEDYQLAYAIDILKGLSAFAPAD
>gi|56698624|ref|YP_169001.1| hypothetical protein SPO3813 [Ruegeria pomeroyi DSS-3]
MRGDRMSDLTLTKIRLRNGAWEGRLTGAPTTGKRPDIRVTHLDQPVPDVELVEGTDSSFWTLTIPVPDYA
IADGVQTFLIVDGETETKLGDFTLIAGESVPDDLRAEVELLRAELDMLKRAFRRHCLETS
>gi|56698625|ref|YP_169002.1| hypothetical protein SPO3814 [Ruegeria pomeroyi DSS-3]
MGRVLDRLFHLREMRRWRRAARNALSTPLSELRGQRNRARDLRTHLDRLINVADGRLALPLIGSSFFPKP
HGTDWSWRPELWRGPLASPGLSSVPTRSTLGGEVTLFHDCEFSELTLRQLRNLREADLAPYGLRMDVFKF
DGSFLSLVIDLPETAAEGMTRAHLLRVDTIIESEKPLEIFARLNIRHGPNTEQIVRELPLHEQDVMVEFD
LAYSRLNEKRIEKIWLDLIFEAPEMNQVILRDLTFCRHRRAAL
>gi|56698626|ref|YP_169003.1| ABC transporter, permease protein [Ruegeria pomeroyi DSS-3]
MMEPSLFSFIWKHSKRQQIVLLALTVISFPFLYATLELPKQIINDAIGAQTDRIDLWGLELSQIEYLFAL
CLAFLAMVIASGLMKMKINTMKGVLSERMLRRLRFQLIARMMRFPRSYYSTTSQGELVSMITSEAEPMGG
LMGDAVAQPVFQAGQMLTIVTFLFMQNVWFGLASVALIPLQAWLIPRLQRQINLLNKARIQQVRHLSSEI
GESAAGIADLRTNGGWRYRLAQITDRLGRLYDIRFRIYQKKFFMKFLNNLISQMTPFLFYSVGGYLAIKG
QITVGALVAALAAYKDLSSPWKELLTYYNQVQDMSLRWQVVTERFAPQGMIPAELFEGEPKEIPRLTGAI
ELRDVTVRDQDGNTILEDIDLTIPPGARVAIQSDRPAERAALAQLLTREIVPSRGEVVISGYPLSTLHQA
VIAARIGYAHSRPYLFDGTLGDNLLMPLRTRPQSDSLAPTRPGRRQIEAVEAGNSGDTLDADWIDPGLAG
LSDGDQIRDWWFQLVEAMGLDEFMFRRTLRSRIDSRLHESLAAEIVAQRDTVARRLNQRGLAEMVHRFHP
DRFNPAVPLGGNLLFAAPVREISQEQLVGDGRFIQMLRNEGLADEAMSIALGVVATLRQTFGRDGTQHPL
FRRIGMEDAVYLRLLDIADRQAAGGTEALSDEERAQLMTVPFLLTAEQIGPTFPEEYKDKILAIRRDRAS
RLRTLVGSDFVAVDPQVYIPRLTVLENALFGRVSIVAGAQAEAIEDTVAEVLAEAGLRRRIAAIIYDLPA
GLGGANLPTVFQERAAFSRASIKRPDILILDNALASHDSESRLRTRQRLRELLPRAIMIFMEDRFANPEA
YDLFIEIKQGRIDGVTRAQPDLAAGAAADLDRKLKIIASTPLFTRLDARNQRLLAFSAQWYRASAGQVIF
SSGQTADAAYLCLSGRAALRWPEDAPGERPITLVEPGRLIGDLSIITRQPRPMDLVAETDSRFLRIGAEE
FRAVIEHDAGVSLHLLQTVAGHLVEAGDILRAARINITDFTDQSLRPVPRPENTKARDA
>gi|56698627|ref|YP_169004.1| CAAX amino terminal protease family protein [Ruegeria pomeroyi DSS-3]
MMPDRPAYTPHEQLVAPGRARPELWRLIAGLIAIGVIVMAANMVLYGAVNTLASPEWAAGFTSGTTPDGL
LVLLGSFGFVIVGVGVAACLFQHRAPLGILGPPRLALRQFWQVFRLLLVLGVLLLILPPYDMGAPLKENL
PPGRWLLLLPLSILALLIQTGAEEILFRGYVQQALAARFRSALIWMVLPSVLFALGHYLPQEAGGNALPI
ALWSGVFGILMADITARAGTLGPAIALHLFNNMIALLIVSLPDSLSGLSLYLLPYSMADTEHLRAWLAVD
FATMFVTWLLARLALRR
>gi|56698628|ref|YP_169005.1| acetyl-CoA carboxylase, carboxyl transferase, beta subunit [Ruegeria pomeroyi DSS-3]
MNWITNYVRPRINSIFSRREVPENLWQKCDECGTMLFHRELADNLNVCTQCGHHMQITPRARFQALFDGG
IFTEVEVPEPVADPLHFRDQKKYPERMKAAQKGTGEKEAMLVASGEIGRTPIVAAAQDFSFMGGSMGMYV
GNAIIAAAQKAVDLKRPLILFSAAGGARMQEGILSLMQMPRTTVAVQMLKEAGLPYIVVLTHPTTGGVTA
SYAMLGDVHIAEPNALICFAGPRVIEQTIRETLPEGFQRAEYLLDHGMLDRVIKRTDLREELITLTRMLL
NLPPAVRGDLPPPEAATPETAKEQTAPSEAPAKS
>gi|56698629|ref|YP_169006.1| folC bifunctional protein [Ruegeria pomeroyi DSS-3]
MTNPGSDVILQRMLALHPKIIDLTLDRVWRLLAALDNPQDRLPPVIHIAGTNGKGSTQAMIRAGIEGAGL
SAHAYTSPHLARFHERIRVAGELISEPDLVAVLDECYAANGGETITYFEITTCAALLAFARTPADYTLLE
VGLGGRLDATNVIARPALSIITPISMDHEQFLGDTLAKIAGEKAGIIKRDVPVVSGPQPDEVLEVIEATA
ARLGAPLLAHGQHWHVRQERDRLIFEDETGLCDLPLPNLLGAHQIENAGAALAALRHLNLGEAACEAAVT
RAHWPARMQRLKTGPLVQSAPIAELWLDGGHNPAAGVALATLLASRPGRPTHLICGMLNTKDVTGYLRPL
SAQAGSLTAVSIPGEANTLSAEQTAVAAQSVGLTASTAPDVATALARIVAAEPDARVLICGSLYLAGNIL
RENG
>gi|56698630|ref|YP_169007.1| AFG1 family ATPase [Ruegeria pomeroyi DSS-3]
MTAVSALYATRVAEGTLQADVAQEAALAEFDRIHEALSTPVKRGLFRKAPPPPRGLYLWGGVGRGKSMLM
DLFVEVLGETVPVRRVHFHAFMQEIHAGMHAARAKGVADALAPVAEAVIRSVKVLAFDEMQITDITDAMI
VGRLFEALFAAGVVVVNTSNRVPDDLYKDGLNRQLFLPFIELIKERMRVWEMISPTDYRQNRLEGARVYF
TPIGPAARGEIEAIWRDLTGGAGGPLILKVKGRDVELPAFRNGIGRASFYDLCGRMLGPGDYLAIAEAVK
VLVLEDIPRLSRNNFNEAKRFVTLIDALYEARVRLICSAAAEPEMLYVEGEGTFEFERTASRLREMQDKE
WGK
>gi|56698631|ref|YP_169008.1| major facilitator transporter [Ruegeria pomeroyi DSS-3]
MDRSARLINPILIVSCIIITVSFAVRASFGVFQIPIAEEFGWLRTDFSLAIAIQNLAWGVGQPIFGAISE
KIGDRKAIFLGALLYAGGMVLSAWSTTPLEHQIYAWAVGFGIAGTGFGVILAVVARASSDENRSMSLALI
TAAGSVGQVIGAPTAEWLLTFLPWQQVFIVFAVAVLALVLTLPMLRAPAPSSKAELEESMGQILTRAFRD
PSYTMIFLGFFSCGYQLAFITAHFPAFVTEMCGPILPGGVLHSMGITTTSALGAVAISLVGLANIAGTLT
AGWAGKHFSKKYLLAGIYTARTVIAAAFILLPITPLSVILFSVAMGSLWLATVPLTSGLVAHLYGLRYMG
TLYGIIFFSHQLGGFLGVWLGGRMYDLYGDYTMVWWIGVGVGAFSAIVHLPIRENRAPLPA
>gi|56698632|ref|YP_169009.1| ornithine cyclodeaminase/mu-crystallin family protein [Ruegeria pomeroyi DSS-3]
MSIPHIPFAEGEAKLDWLELTRALADGHTLPKAQIGDTFLYRDPDTMLTRSAWIDGLGIAVKTANIFPRN
PERGDPMINGAVNLYSDHDGALSALVDFHLVTKWKTAGDSLLAALRLADPDAREVLVVGAGTVGLSLCEA
FGAGFPKARLKMWNRTRSKAEEVAARYAGLEVVDDLAEAVNRADIIVTATMSSEPVIRGEWLRPGQHLNL
IGAYRPDMREADDEAMRRARIFVDSVDTTLDHIGELMMPLADGVITRADVVADYYDLDAFKASRDDITLF
KNGGGAHLDLMTSRYILDKWQG
>gi|56698633|ref|YP_169010.1| HAD-superfamily hydrolase, subfamily IA, variant 1 family protein [Ruegeria pomeroyi DSS-3]
MTIEAVIFDIGNVLIEWQPERYYDRVLGEERRRQMFAEVDLHGMNDLVDQGHHFTDTIYDWAEKYPDWRD
EIRAWHDSWIELATPEIPHSVRLLRALRNKGVPVFALTNFGVQNFDYACTVYPFLTEFDRAYVSGRMQMV
KPHAPIYAAVEADCGLAPAALLFADDRVENIEAAQTRGWQVHHFTGPQGWAARLVAEGLLTEGEAA
>gi|56698634|ref|YP_169011.1| 50S ribosomal protein L23 [Ruegeria pomeroyi DSS-3]
MSAKAQHYDVIRKPIITEKSTMASENGAVVFEVSIDSNKPQIKEAVESLFGVKVKAVNTTITKGKVKRFR
GQLGKRKDVKKAYVTLEEGNTIDVSTGL
>gi|56698635|ref|YP_169012.1| 50S ribosomal protein L4 [Ruegeria pomeroyi DSS-3]
MKLDVIKLDGTKAGNIDLDEALFGLEPRADILHRVVRWQRNNAQAGTHKVLTKSEVSYSTKKIYRQKGTG
GARHGSRKSPTFRHGGVYKGPTPRSHGHDLTKKFRKLGLRHALSAKAKAGELVVIENAEAEGKTAALAKQ
VANLGWKRALVIDGAAVNEGFARAARNIEGLDILPSMGANVYDILKRDTLVLTKAAVEALEARLK
>gi|56698636|ref|YP_169013.1| 50S ribosomal protein L3 [Ruegeria pomeroyi DSS-3]
MRSGIIAKKVGMTRLFMEDGKQIPVTVLQLDNLQVVAQRTTEKDGYTAVQLGAGTPKIKRVSKAMRGHFA
AQKVEPKRKLAEFRVSEDALIEVGAEISAEHFLTGQKVDVSGTSIGKGFAGAMKRHNFGGLRASHGVSIS
HRSHGSTGQCQDPGRVFKGKKMAGHMGAARVTTQNLEVVKTDAERGLVFIKGAVPGPKSGWVTVKDAVKK
KAPEGLPFPAAVKSAATEAPVAEAPAEGGEA
>gi|56698637|ref|YP_169014.1| 30S ribosomal protein S10 [Ruegeria pomeroyi DSS-3]
MQSQNIRIRLKAFDYRVLDASTQEIVNTAKRTGAQVRGPIPLPNKIEKFTVLRGPHVDKKSRDQFEIRTH
KRLLDIVDPTPQTVDALMKLDLAAGVDVEIKLQS
>gi|56698638|ref|YP_169015.1| YaiI/YqxD family protein [Ruegeria pomeroyi DSS-3]
MTTLYVDADACPVRAEAERVATRHRLRMAVVSNGGLRPSQNPLVETVIVPDGPDVADQWIAERAGRGDVV
ITADIPLAAKCVEAGARVLRHNGEAFTPANIGQQLAMRDLMADLRAANPLGAGGGGKPFSKADRARFLDA
LEREIRAAQRDAQG
>gi|56698639|ref|YP_169016.1| soluble pyridine nucleotide transhydrogenase [Ruegeria pomeroyi DSS-3]
MSTFDYDLIIIGSGPSGRAAAIQAGKLKRRVLVIDRKDRLGGVSVHTGTIPSKTLRETVLNLSGWRERSF
YGRSYRVKDRISAEDLKARLHMTLDYEVDVLEHQFNRNHIDTLNGLARFVGPHEIEVATEAGDTTRLTAA
KFLIATGTKTYRPDYVPFNGKTVVDGDDFLEMERIPRSLAVIGAGVIGVEYASMFSALDVRVTLIEPRET
FLDFIDRTLIQEFTHQIRENGVDLRLGSAVEKIEDTGSHIEISLANGRHIRAEMLLFAAGRMGATSALNL
DAVGLETDHRNRITVDRKTYQTSVPHIYATGDVIGHPSLASTSMQQGRVAACHALETPTLPESPWFPYGI
YSVPEMSTCGMSEEELQERGIPYEVGVARFRETSRGHIMGLEHGMLKMLLSLKTRRVLGVQIVGEGATEL
IHIGQAVMNLKGTVDYFVQNTFNYPTLAEAYRTAGLDAFNRMPIPEEFKVKKPKK
>gi|56698640|ref|YP_169017.1| S-formylglutathione hydrolase, putative [Ruegeria pomeroyi DSS-3]
MEKDRVMIETVSENACFGGVQGVYRHASAATGCDMTFGLFLPAEAKDGPVPVLWYLSGLTCTHENAMVKA
GAQGWAAEQGIALVFPDTSPRGEGVADHADYDLGQGAGFYVNATQEPWAPHFRMWDYVAEELPALVAEHF
AIDPTRQAITGHSMGGHGALTLAMNLPGRYRSVSAFAPISNPTGSDWGRKQLNAYLGTDEAAWAKHDATL
MMQQAGFDGPILIDTGTSDQFIDLLRPEALAAAIAERRQQATVRLQPGYDHSYFFVSSFMEDHVSFHAEA
LYRD
>gi|56698641|ref|YP_169018.1| peptidase T [Ruegeria pomeroyi DSS-3]
MQNQFDKELQDRLVRYAAIDSQSDESVPTSPSTACQFDMLHLLRDELVEMGAQDVELTEYGVVLATIPGT
APGPTVGFLAHVDTAPQFNASGVKPRVIGGYNGGDITFPDDPALVLSPAEHPYLAEKIGHDLITASGTTL
LGADDKAGVAIIMTMARHLLNSPDIARGPIRVAFTPDEEIGHGVNERLPADLRADFAYTLDGGQVGEIEY
ESFSADRAVVTVTGVSIHPGWAKEKMVNAIHLAAKIVQTLPQATMTPETTDGRDGFIHATDMEGGSSEMV
IKFILRDFERDGLAAKGELLRQVCAAVQAGEPRAAIKCEIYPQYRNMRYWLEKDMTPVELARAAAEAEGV
APISVPIRGGTDGSRLTEMGVPTPNIFTGMQCIHGPLEWISVQDMATATRTCLRLAQMAAKG
>gi|56698642|ref|YP_169019.1| alpha/beta fold family hydrolase [Ruegeria pomeroyi DSS-3]
MGERNLTEERDKFAALHPEARHVVHGRDWGVIRVGQSGPALVLIPGTLGRADIFWQQIAALSGEARILAV
SYPASGGISDWAADLAQIISDAEMQGATILGSSLGGYLAQYLTATEPALCGGLVAANTLASVRGIDQVPP
YALDLATTPIDDLRAGFEAGLASWQAPDHPYSDLARLLLQEVRTRIPEGELRARLQALKTAPELPAQSLP
RDRMFTVESDDDHLISPPMRSALRAALTPARAYRFRATSHFPYVTRPDAYTALLREVLGLTGDHAIWPAG
EESLS
>gi|56698643|ref|YP_169020.1| ornithine cyclodeaminase/mu-crystallin family protein [Ruegeria pomeroyi DSS-3]
MKIISAEEIRQHLPMRDAIEVVEKTMIQVSQGKANLPLRTVMDINGTNRLGVMPGALSDPTLYGIKVLSL
FPGNPAKGLSSHTGTVLLFDAETGQPRAALDADAITAIRTAAATAVATRALARSDAQVLALIGTGEQAES
HIEALTLVREIAEIRVAGRNPERAAAFVRRMADHYPGITFTAATDVEQAVSGADIVCTLTSSPSVVLHGD
WIGPGTHVNAVGASIPSMQEIDETLLLKSELFVDYRPSAFAQAREIISALETGAMSEAHVRGEIGEVLSG
KIPGRSGTDAITLYRSLGIAAQDLACADHVCRTIG
>gi|56698644|ref|YP_169021.1| DEAD-box ATP dependent DNA helicase [Ruegeria pomeroyi DSS-3]
MDKCASLRYMAQSLRRGESRALLDIPLMTSPLLDALAERGFDTLTDVQQAVTDPELASADLLVSARTGSG
KTVGFGLAIAPTLLGEAETLGPPAAPLALIVAPTRELALQVSRELTWLFAKAGGRIATCIGGMDARTERR
TLERGAHIVVGTPGRLRDHITRGALDLADIRAVVLDEADEMLDLGFREDLEFMLGEAPEDRRTLLFSATV
SPAIAELAKTYQRQAARISTLGGERQHSDISYQAVQVSGGDGEHAIINLLRFHDAPTAIVFANTRAAVAR
LTARLANRGFAVVSLSGELSQDERSHALQAMRDGRARVCVATDVAARGIDLPNLDLVIHADLPTNTEGLL
HRSGRTGRAGRKGISALIVPDKISKKASRLLKWAKIEAEWTQAPTPEDILAKDEARLLADPLWTDPVEDE
ETRIAAGLMEQFTAQQIAVACLRLYRAKLTAPEELNQPPARGAPSVAASFGPSRWISLSVGREQRAEPRW
LLPLLCRAGNLEKSQIGKITMQAQETHVELAEAAVQGFLDQIGPSGVVEGEITARLLDGVPEMTRGPQGK
PRPRSDRPAAKPFKPAKPRHKADRDSAAPAAEPRPFREREATPAPAKPRRAREDGADRPAKPARATLHAG
KSEKPYKPRKPASGPGVKPSSKPGGKPSDKPGGKPWAKPGAKPGVKPGGKKPGGKPTAGASRPAAGRPGG
EAPPKRKRD
>gi|56698645|ref|YP_169022.1| dihydrodipicolinate reductase [Ruegeria pomeroyi DSS-3]
MTHIPGIVITGASGRMGQMLVRTVTDSDKVRLVGALERPGHDWIGRDVGEAMGGQALGVAVTDDPLEAFA
QAQAVIDFTAPAATLGFAALAAQARCVHVIGTTGMTAEQIAALEPAARHAVIVRAGNMSLGVNLLVQLTK
KVAAALDEDFDIEVIEAHHHHKVDAPSGTALMLGEAAAEGRGVRLDDVADRARDGITGARTRGDIGFHAI
RGGDIVGEHDVLFAAPGERIVLRHVASDRAVFARGALKAALWGQGKAPGHYDMVDVLGL
>gi|56698646|ref|YP_169023.1| ribosome-binding factor A [Ruegeria pomeroyi DSS-3]
MAKNKFHDGPGPSQRQLRVGEVIRRTLSEVLARGDVHDPDLNRMSITVGEVRTSPDLKIATAYVLPLGGR
GQEDVVQLLSRNKGELRRMIGKKLGLKFTPDLRFRLDETFDRLDDTRRMFDQDAVRRDLDE
>gi|56698647|ref|YP_169024.1| hypothetical protein SPO3836 [Ruegeria pomeroyi DSS-3]
MIRAAAVLFLLGVAGQAAAVDCRDLTHEGNLYTVCEVDARTADLRLFLNDVEGAPLGQFSTVDQTLQTEG
KRLAFAMNAGMYHDDRSPVGHYVEDGIEQKRVIANAGPGNFGLLPNGVFCLRSGRADVIETLDYQAAKPD
CRFATQSGPMLVIDGALHPRFLPDSTSRYIRNGVGTSADGARAVFAISGNSVTFYEFGTLFRDVLKTPNA
LYFDGNISRLYAPSLNRADLGFSMGPIVGVAVEDR
>gi|56698648|ref|YP_169025.1| tRNA pseudouridine synthase B [Ruegeria pomeroyi DSS-3]
MARKRKGRDISGWLVVDKPAGMTSTAVVNKVRWALGANKAGHAGTLDPEATGVLAIALGEATKTVPYITD
ALKAYVFTVRLGQATNTDDAEGEVIASSDLRPTDEQIKDALAPFLGDIMQVPPKFSAVKIDGQRAYKLAR
DGEDVELAARPLWVEELLMLDRPDPDHVLLEMTCGKGGYVRSIARDLGAALGCYGHVRELRRIWSGPFEA
EDGITLEQVEALAKTPELDSYLRPLEEGLADLPELKCSPEGAQRLRNGNPGMVYPGEAEYGDEAWASFEG
RAVAVGIYKSGELHPARVFARPE
>gi|56698649|ref|YP_169026.1| hypothetical protein SPO3838 [Ruegeria pomeroyi DSS-3]
MITRSHTKGDAPSTAVYSDCERYRYSLTRIWDPAGRKALFVMLNPSTATEVQNDPTVERCERRARTLGFG
AFQVTNIFAWRDTDPRKMRAAADPVGPENDAAILAGAEWADQIVAAWGTHGAHLERGLAVERLLRGTGLP
LFHLGLTKDGHPKHPLYIGYAQQPSPWS
>gi|56698650|ref|YP_169027.1| type I secretion target repeat-containing protein [Ruegeria pomeroyi DSS-3]
MGYFPTGVTCVWSSGMLMLAGLLGLAAVSGVVLMTGGGEDDADEELLPAEDQQLEVETTETLGMISGGGA
QQPLLMSDAIIPSDGLVLSGGSEGDVLTGQEGNDQINGYDLNDSIAGDDGNDTLHGAGGDDDIRGDDGFD
LLHGEDGDDSLDGGAGNDNLFGHFGEDELQGGAGDDTLYGGQDNDQLDGGADNDALHGGYGDDTLSGDAG
QDTVFGGFGNDLILGIEGGPGNPISPVAQEVDYLNGGQGDDTIWAGAGDIVTGGDGADNIVAGDWANDGD
AIEVMDFDPDEDRLMVVWDGPEGQSPQIEISKDPENPDISRVTVDGHDVALLRGGEPDDVNDIVLVRPGD
LPLTGTAA
>gi|56698651|ref|YP_169028.1| 30S ribosomal protein S15 [Ruegeria pomeroyi DSS-3]
MSITTEEKARVMKEYGTKDGDTGSPEVQVAILSSRIATLTEHFKTHKKDNHGRRGLLKLVAQRRKLLDYL
KAKDEARYQSLIERLGLRR
>gi|56698652|ref|YP_169029.1| TetR family transcriptional regulator [Ruegeria pomeroyi DSS-3]
MTQAATILRTGRKFDQVLRGAREVFMSDGFEGANVDDIARAAGVSKATLYSYFPDKRLLFVEVAQTECQL
MAERILSMIDEDRPVREVLTITATQLVAFLISDFAQQVFRICLAERERFPELARAFYAAGPENGQRQICE
YLEKAVTKGELVIADIPMAAEQFSELCKTRLWTRAVFGIQTRFTQAEIDEVALAAVDTFLARYGA
>gi|56698653|ref|YP_169030.1| hypothetical protein SPO3842 [Ruegeria pomeroyi DSS-3]
MRFLSYRKHFRDLSEQEVIALAISSEEDDARIYRSYAEMLRADFPATAKLFDGMAAEEDEHRAQLIALHE
RRFGAVIPLIRREHVAGYYARRPVWLVENLGIERIRTEAAAMERDAERFYLTAAARSTDAATRKLLGDLA
AAEAGHQATASDLESTHLDDETRANEDATAHRQFILTWVQPGLAGLMDGSVSTLAPIFATAFATQDTWTT
FLVGVAASVGAGISMGFTEAASDDGELSGRGSPVKRGFASGIMTTLGGLGHALPYLIPDFWTATSIAIFI
VFFELWAIAWIQNKYMETPFFRAAFQVVVGGALVLAAGVLIGSG
>gi|56698654|ref|YP_169031.1| malonate transporter, putative [Ruegeria pomeroyi DSS-3]
MVEIFLRTLPFFVIIGLGFWAGRTRFFTPEATAYLTKFVFFFALSAMLFRFAATLPFAEIFNGQLVMGYL
WGTAGVYGIASLVAFLRKLDVPTAAVEAQCAAIGNVGFLGLPMLAMLFGEAAIGPVMLVLSVDLIVFSSL
IVILINGGRDGRLSLGTLRLIGMGLLKNPMIVSISAGLIWSSLRLPIPAPLNDFLTILGGAATPGALFAI
GASLAGRSAERVQIAAWLSLCKLVIHPILVALAVLWVFPVDAFSASVAIAAAALPVAGNVYMLAAHYGVA
PQRASAAILLSTAVSILTVPAFIAWVTSA
>gi|56698655|ref|YP_169032.1| DNA polymerase I [Ruegeria pomeroyi DSS-3]
MSTFGKGCHLHLIDGSAFIFRAYHALPPLTRKSDGLPIGAVSGFCNMLQRYVDGDHGPDAPTHLAVIFDK
GSHTFRNDLYDLYKANREAMPEDLRPQIPLTRAATEAFNIPCKELEGYEADDIIATLSNQARDAGGRVTI
VSSDKDLMQLVGDGVEMFDAMKNKRIDRDGVFEKFGVFPDRVVDVQALAGDSVDNVPGAPGIGVKTAALL
INEYGSLEDLLDRAEEIKQPKRRQTLIDMRAQIELSKRLVELDANTPLDFTLDDLELRDPDPEKLLSFLA
EMEFRTLTKRIADKLGAEAPVIAEKASPEAEEAPQPEQPPFDASRYECVRDAAALETWIAQARERGWVAV
DTETTSLNEMTADLVGISLAVEPGAACYIPLGHRDGDAGDLFGSDKLAEGQLPLQQTLDLLKPMLEDPAI
LKIGQNMKYDAKIFARYGVAVAPIDDTMLLSYAMHGGLHGHGMDTLSERYLSHTPIPIKPLLGSGKSAIT
FDKVAIDEATAYAAEDADITLRLWQLFKPQLHRAQVTTVYETLERPLVPVLAEMEMHGVKVDREVLSRMS
NAFAQKMAGLEAEIHELAGEPFNVGSPAQVGEILFDKMSLEGGKKGKTGKYSTPADVLEDLATEHELPAR
ILDWRQLSKLKSTYTDALQTHINPDTGRVHTSYSITGANTGRLASTDPNLQNIPVRTEEGRRIREAFVAE
PGNVLLSLDYSQIELRILAHIADIPALKQAFADGLDIHAMTASEMFDVPLDQMTPEVRRRAKAINFGVIY
GISGFGLARNLRIPRAEAQEFIDRYFERFPGIRTYMDDTIAFAKEHGFVQTLFGRRIHTPEINAKGPHAG
FARRAAINAPIQGTAADVIRRAMVRMPDAIRDLPAKMLLQVHDELLFEVAEEAVEDTIAAARDIMEGAAD
PAVRLDVRLVVDAGRGANWAEAH
>gi|56698656|ref|YP_169033.1| hypothetical protein SPO3845 [Ruegeria pomeroyi DSS-3]
MRTGARAIAVRSSMQYSKAGILTESPMLPARFAPVLFAAIMSGLMSCIVTCVATIRAVGMDPGMAGKWMG
AWVLAWPIAFVVLLFVAPLARRLVAALVRSEA
>gi|56698657|ref|YP_169034.1| hypothetical protein SPO3846 [Ruegeria pomeroyi DSS-3]
MTIQAPETKIVDKSRVACDGGEGALGHPRVWLQIPEDTGWVECPYCDCKYVLKGSKADA
>gi|56698658|ref|YP_169035.1| ABC transporter, ATP-binding protein [Ruegeria pomeroyi DSS-3]
MSEDAIRIEGLTKTYRGSHGQPEKQALKGIDLNVPRGSVFGLLGPNGAGKSTLINILAGLVTKTAGKVTI
WGFDQDQNPRQSRAAIGVMPQELNLDPFFTPRAALEVQAGLYGVPRSQRWSDEILAMIGLTDKAEAYART
LSGGMRRRLLLGKALVHRPQVLVLDEPTAGVDIELRQMLWSNVRKLNAKGMTIILTTHYLEEAQEMCDQI
AIINQGSVVARDSTANLLGRLDARAMVIQPDGPVSTLPQGPGIEAEARADGTLALRYHNRQTSAEDVLAA
VRAAGIHIRDVRTEQADLEDVFLALTSSR
>gi|56698659|ref|YP_169036.1| sterol desaturase family protein [Ruegeria pomeroyi DSS-3]
MDPDLIRFVAEESLRIVQRYLFFAAGAFALFYLLLRRLMWPRKIQKRWPRLTDYGRDLAFSLISVGIFAV
ISSLIFFVFRDQTSIYGGSMGSRGWGYLVFTFVWMLALHDTYFYWIHRLMHTRVLYRHVHLVHHHSTNPS
PWTAYAFHPVEAVLEVGILPLIAFTLPVHWAAVMYFFIFQIAYNVYGHLGFELYPRGFHKHWLGRWINTS
VAHNQHHGRFTGNYGLYFLFWDRVMGTLRADYDAAYEGATGAAAPVTATK
>gi|56698660|ref|YP_169037.1| hypothetical protein SPO3849 [Ruegeria pomeroyi DSS-3]
MTRQESPMIRITPLDTETVRAWQTGAPDAYGNPPERALSDGGGNPCRHCLRYIPQGAPMLILAHRPFDGL
HPYAETGPIFVCAEPCARHAGDEPLPEMLTNSPDYLIKGYGANDRIVYGTGRVVPAADLSAGAEAILSRP
DVAYVHVRSARNNCYQARIDRA
>gi|56698661|ref|YP_169038.1| glutathione-dependent formaldehyde dehydrogenase [Ruegeria pomeroyi DSS-3]
MRTRAAVAVEAGKPLEVMEVNLEGPKAGEVLVEIKATGICHTDEFTLSGADPEGLFPAILGHEGAGIVLE
VGEGVTSLKPGDHVIPLYTPECRQCEYCLSGKTNLCQAIRTTQGKGLMPDGTTRFSMLDGTPILHYMGCS
TFSNHTVLPEIALAKVRPDAPFDKICYIGCGVTTGIGAVINTAKAEIGCRAVVFGLGGIGLNVIQGLRLA
GADQIVGVDLNPDKVAMATRFGMTDFVNPAEVEGDMVAHLVELTRGGADYSFDATGNVGVMRTALECAHK
GWGESIIIGVAPAGAEISTRPFQLVTGRVWKGTAFGGAKGRTDVPRIVDWYMDGKIEIDPMITHTLSLDE
INKGFDLMHAGESIRSVVVY
>gi|56698662|ref|YP_169039.1| HemY domain-containing protein [Ruegeria pomeroyi DSS-3]
MLKILVFVAIIALLALGAGFLMEASGGVQITVAGTEYTLGPLQSVIGFGLLVVAVWLFFKLLTLLIATLK
FLNGDETALSRYFDRGRERRGYQALTEGLMALASGEGRLAMAKAARAEKLLQKPELTNLLVAQAAEMTGD
TKKAAETYRKLVTDQSTRFVGVRGIMKQKLAEGDDETARKLAEKALALKPRHEETQDVLLTLQTRAQDWA
GARATLTSKLKTGTLPRDVYKRRDAVLALSEARDLLSETASLDQQERAIEANRLSPDLIPAAAMAARAHI
AKGKPKNAAKILTKAWQVQPHPDLAHAFAEIAPDETPAARIKRFAALAKAHPQHAETRLMMAELNIVAED
FPEARRALGDLLDHAPDARAYTLMAAIERGEGASDAVVQGWLARALTAPRGPQWVCDNCQHIHAAWAPVC
GNCNSFDTLSWRAPQDTDAGAMTTANMLPLIVGAIEQKAPDVEEVDFETDADSDDSVEGTAKEVDGANEP
VSR
>gi|56698663|ref|YP_169040.1| hypothetical protein SPO3852 [Ruegeria pomeroyi DSS-3]
MSNGIRYLKIFRFERDSAVAEKKDPELETVTDPMSETKQELPEPAVDEAKAATEAPSEAEAEAEAEAEAE
AEAEAEAEAEAEAEAEAEAEAEAEAEAEAEAEAEAATPPETAPQPAPTETRRGGFAPALIGGIVAAVLGF
LAGRADLIDPLLPPGLRASDGAEAIAALQSKLDQQQAALSALKSDIGKIEMPDISGLSAQLGDLSAQLAP
LATTAEDLSARTDSQAQALSALTARLSELEARPVAEGASPEVVAAYEAELSRTREVLAAQRAEVEQMVAD
AQTLKATAAADAQRAANRGTLAQLRGQLEAGAAYAEPLAALTAAGIDIPVALSGPAADGVASLAVLRDTF
PPAARAALADLRQETRGTGLLAFLERQTGARSVTPRAGDDPDAVLSRAEAAVTSGDLATALDLVAALPEA
AQAALADWVAQASSRHQAIAAADALAQSLNSN
>gi|56698664|ref|YP_169041.1| uroporphyrinogen-III synthase, putative [Ruegeria pomeroyi DSS-3]
MTRPRGASERFVAGLRPEIREALSVVYSPLLRIEPTVETLDFGPAAGLIFTSSNGVGIAARLSADRRLPC
FCVGRATTRMAAQAGWSATMAGESAEALIAGLLAQRPDTPLLHLRGEHGRGEVAANLTRMGLRTEERVIY
AQRLLPFSDEALAVLAGDDRVIAPLFSPRTARQFAGLVRGQAPLSVVAMSVAVAKPLENTPLSQVLTATA
PDADAMRAAIENLVTGAIRVEGRPGAH
>gi|56698665|ref|YP_169042.1| O-sialoglycoprotein endopeptidase, putative [Ruegeria pomeroyi DSS-3]
MAQTLTILGLESSCDDTAAAVVRQTEGQAAEILSSVVHGQADLHSAYGGVVPEIAARAHAEKLDICVRQA
LTEAGVSLTDLDAVAVTAGPGLIGGVMSGVMCAKGIAAATGLPLIGVNHLAGHALTPRLTDQIAYPYLML
LVSGGHCQYLIAHGPEQFSRLGGTIDDAPGEAFDKTARLLGLPQPGGPSVEGEARQGDPKRFRFPRPLLD
RPDCDLSFSGLKTALMRMRDQLVGEKGGLTRQDRADLCAGFQAAVVDTLAEKTRRALTLYLDEAPAEPVV
AVAGGVAANAAIRAALETVCAEAGARFTAPPLRLCTDNAAMIAYAGLERFRSGARDGLDLTARPRWPLDQ
SSPAMLGSGKKGAKA
>gi|56698666|ref|YP_169043.1| NAD(P)H-dependent glycerol-3-phosphate dehydrogenase [Ruegeria pomeroyi DSS-3]
MSIAVLGSGAFGTALAISLAGKGPVTLWSRAPEQARQMQETRENHQRLPGLPLPAALNVTADLDQATRCD
TLLLAVPMQKLRGMLSEHAAALHGRVLVACCKGIELNSGLGPMAVMAETLPGTRTALLTGPSFAQDIARG
LPTALTLACADPDLGRDLQAQLTTTNLRLYRTTDTIGAELGGALKNVIAIGCGACIGAGMGDSARAALLT
RGFAEMQRLAALKGARPETLMGLSGLGDLMLTCSSDLSRNYRFGLALGRQEPFDRATTVEGVATAHAVAQ
LARDLGIDMPISTTVAQLSNGDYSVAEAMRSLLNRPLKEE
>gi|56698667|ref|YP_169044.1| YciI-like protein [Ruegeria pomeroyi DSS-3]
MLVALIARDKDGALQTRLDNRAAHLAYIEETGVVSQAGPLLDGDAMIGSLVILDVSDLAAAEDWAANDPY
AKAGLFQSVQLIPWKKVIG
>gi|56698668|ref|YP_169045.1| hypothetical protein SPO3857 [Ruegeria pomeroyi DSS-3]
MAYWLFKSEPETWGWDDQVAKGDAGEEWDGVRNYQARNFMRAMALGDRGFFYHSQSDKAVVGIVEVCAEV
HPDSKSDDPRWECVDIRAVRPFQQPVTLEQIKADPRLSEMVLVRNSRLSVQPVTEAEWRAICAMGQTDPD
>gi|56698669|ref|YP_169046.1| hypothetical protein SPO3858 [Ruegeria pomeroyi DSS-3]
MELLNVLAAAFGAFALGSVWYMVLAEPWMQDAKVPRGPDGRPEGGMTPGIFAASFVLQLIVAGMMRHVFA
LSGIDSPGAGIVAGIGVGLFFIAPWITLNNLYGMRPLRLSLIDGGYATLACAVMGLILTLF
>gi|56698670|ref|YP_169047.1| hypothetical protein SPO3859 [Ruegeria pomeroyi DSS-3]
MGKRDDLIAQYADDLKNKCGMTPDMDLLTKVTIGCGPAIYDADASTVASSQPSELETVKNNFLIKKLGLA
DGPELDAAIAKVVDTYGKSERNKYRAVVYYMLTKHFGKESVYG
>gi|56698671|ref|YP_169048.1| hypothetical protein SPO3860 [Ruegeria pomeroyi DSS-3]
MWVEQIEKILTPRTPLILRCRNVPIPLIVSVFVECDMFDESLPISRAMKCLFVSVLCLSVGATAADAKPK
IKVVNKTYSVNATTAQDLIQQMDARGPKGFWAYTDWYVKWTGGCDLSVSITYTMPKHKNEAKLDPELRKS
WQSFVTALRKHEELHGAHGIQAAQEIEKSKCADGDSVIRKWSEQDKVLDQRTDHGKKDGVVLK
>gi|56698672|ref|YP_169049.1| S-adenosyl-L-homocysteine hydrolase [Ruegeria pomeroyi DSS-3]
MAGDYIVKDISLAGFGRKELDIAETEMPGLMTLREEYGKAQPLKGARIVGSLHMTIQTAVLIETLVALGA
DVRWASCNIFSTQDHAAAAIAAAGIPVFAIKGQTLEEHWDYLDKSFLFDEGPNMILDDGGDATLYILLGA
RAEAGEDIIPVPGSEEEEVIKKQIAKRMAASPGWFTKMRDQIQGVSEETTTGVNRLYQLVKDGHLPFPAI
NVNDSVTKSKFDNKYGCKESLVDGIRRATDTMMAGKVAVVCGYGDVGKGSAASLRGAGARVKVTEVDPIC
ALQAAMDGFEVTTLEDEVASADIFITTTGNKDVIRIEHMREMKNMAIVGNIGHFDNEIQVAALKNHKWTN
IKEQVDMIEMPSGNKIILLSEGRLLNLGNATGHPSFVMSASFTNQVLAQIELFTKGDQYENKVYILPKHL
DEKVARLHLARIGVKLTQLSPDQASYIGVKPEGPFKPEHYRY
>gi|56698674|ref|YP_169050.1| putative lipoprotein [Ruegeria pomeroyi DSS-3]
MRKELAMFKPLLSALAGFGLILSAGTATAQSCAARDAIVDRLQQKYSERLAAGGLQPLSGGASVIELWAS
AETGTFTVLLTRASGISCIVAAGTDYFRTPDADPVPDIPS
>gi|56698673|ref|YP_169051.1| HD domain-containing protein [Ruegeria pomeroyi DSS-3]
MATQPRAWQRMLSGRRLDLLDPTPVDIEIEDIAHGLAFVARWNGQTHGEFAYSVAEHSLLVEDIFARMVP
GAGAKWRLAALLHDAPEYVIGDMISPVKAAVGADYGLLDARLTAAIHIRFGLPAMLPIQIKKQIKRADRV
SAWMEATRIAGFTEAEANRFFGRQKPELMQGLDIRLRPPLETRAAFTARYEALISGV
>gi|56698675|ref|YP_169052.1| hypothetical protein SPO3864 [Ruegeria pomeroyi DSS-3]
MAQAPELDPNDPTTQPQPDGGWSEGLDRLSDAIVVPPEVSGFTQEAGVLHSDGRYCPQGALWRRYRPLTT
EPPMPEKVSEVLSGRWLWGGVLWAHFGHFLVESTARLWALNHIDGPIDGVLFIPKRPRVGDQIRGFQRDF
IDLMHPGLPIHVATDPIRVEELIVPGQGFGLGPITQGTQKFRDAIHAGFGKAVEPDGPSKIYISRSALGL
GKGGMLGEERLEDLLRAEGYDIFHPEKYNLETQLARYKAASHVIAADGSALHLYAMVGRPEQKVAMILRR
KAGATNLLAKNVAHFCRCNPMVIDALYTEWVRGEGGKSNRLSFGELDHAVIGRGLAMGGFVRPDVDWSRA
TDEERAQMFRDKGLDQAGDFVESEEYRKRRRRIMRQERRARRAATEDAPTDQTPEIKAS
>gi|56698676|ref|YP_169053.1| photosynthetic apparatus regulatory protein RegA [Ruegeria pomeroyi DSS-3]
MVDAPQPDIGPDKSLLLVDDDEPFLRRLAKAMEKRGFEIETAGSVAAGRAIATARPPAYAVVDLRLEDGN
GLDVVEVLRDKRPDCRVVVLTGYGAIATAVAAVKIGATDYLSKPADATDITNALLATGDELPPPPENPMS
ADRVRWEHIQRVYELCDRNVSETARRLNMHRRTLQRILAKRSPR
>gi|56698677|ref|YP_169054.1| regulatory protein SenC [Ruegeria pomeroyi DSS-3]
MTRLYAFLAAVVAATALGATWIATRGGDGNDRFAQCRAGQIAGGAETIGGPFELVNAKGETVTDKDVITE
PSLLYFGYTFCPDVCPLDTSRNAEAVDILEGRGQMVTPVFISIDADRDTPEVVGDFAANLHERMIGLTGS
PEQVKAASQAYKTYYRAQDKSDEYYLVDHSTFSYLVLPEHGFVEFFRRDETAEKMADRVGCFLDAM
>gi|56698678|ref|YP_169055.1| sensor histidine kinase RegB [Ruegeria pomeroyi DSS-3]
MPDSNMNLVLGQERSSWIRLRTMILLRWVAIAGQVAAILVAQHSYHLQLNLGLCYLAIGISAVGNLLAIF
LFPENKRLGEFENFLMVLFDLLQLGFLLYLTGGLHNPFALLLVGPVIISANVMGLRSTLFIGTTAIVLVT
LLGLYHVPLRTEMGFILRIPDVFVFGHWTAIIIAIVFLGAYSYRISSEVQSMSEALAATQMALSREQKLT
DLGGVVAAAAHELGTPLATIKLASSELVEELDDRPDLREDAALIRQQADRCRDILRNMGRAGKDDLHLRQ
APLSTVIHEAAEPHMHRGKTVHFDEGPGAGGDLQQPSILRKPEVIHGLRNLIQNAVDFARANVWVEAEWT
AETIIVSIMDDGRGYPGHMIGRIGDPFVRRRRAEIDRRARPEYEGMGLGLFIAKTLLERSGAELSFANGS
DPYQTLTKQAERRGAIVQVVWPRAQIDAQTGENSIPLGLNEQFQV
>gi|56698679|ref|YP_169056.1| hypothetical protein SPO3868 [Ruegeria pomeroyi DSS-3]
MVEWLALAAISLLSAGLSARFLLASTQRRKAVPHVLEPGGGQGHVFLFDGADLIGASHGGADKDIHDWHG
LRERLAEDFPGFPSDPDHVEQRGQIVVTPIDGRNDRDVFCEWVDGIVRVELRRHCAALDGVRRIPDTDPL
RLAMDQAPYPVWYLDGDGGIRWCNAAYVMLARKVRGRNPELFDPLFPDTSDIGSPGKKTRISITIGETRT
KLWFDVVIVPQDTGCLCYAMDINAVVDAEIAQRNFVQTLAKTFAQLSIGLAIFDRNRQLALFNPALIDLT
CLPADFLSSRPEVSSFFDRLRNLNMMPEPKNYGGWRQQMNDLLQAASKGNYQETWSLPSGSVYSVSGRPH
PDGAVAFLFEDITAEITLTRRFRSELELGQAVLDHLDAAIAVFASDGSLAFSNAAYHQLWKSDPERSFAQ
VTILDATRTWQDLCTATPVWGEIRDFVDSRENRVEWEGQVQLRSGANLTCTVSPIQNGSTLISFTTLIDD
LARSPAQAEG
>gi|56698680|ref|YP_169057.1| hypothetical protein SPO3869 [Ruegeria pomeroyi DSS-3]
MTASPLILHLDNPDETAHLAVRLGAALAPGDCLLLSGEIGSGKTHFARHLIQSLLPVAEDIPSPTFTLVQ
VYDSARGEIWHSDLYRLTGLDEIEELGLSEAFSDAITLVEWPDRLGPLTPDHALHLSFETDPADELKRRL
TLSWSDPKWDPRIEALK
>gi|56698681|ref|YP_169058.1| hypothetical protein SPO3870 [Ruegeria pomeroyi DSS-3]
MGSAHRGAEMSDRSALATAFLAGTSWATATRAPLAGDASARRYERLTNPETGQTAVLMDAPPEQGETVHR
FVELARHLRAQGLSAPEILAEDPAQGFLLIEDLGDDLFTRVIARDPTLEAPLYEAATDLLVALRDMPLMA
GLDSYGPALLAEKTDIAFDHYVSGITGDDVSETRDRFIDRFGDLLHQTVQGPKVLILRDYHAENLIWLPD
RSDLARVGLLDFQDAVVGHPAYDLVSLLQDIRRDVPARIEMPMIARFIEATGADDHEFRTAYAVLGVQRN
LRILGVFARLSRDLGKTRYLALMAAVWRHVMRDLEHPAMAGIADLLRETLPPPSSENLARLHPR
>gi|56698682|ref|YP_169059.1| nucleotidyltransferase family protein [Ruegeria pomeroyi DSS-3]
MTSSDLPVMLFAAGFGTRMGDLTRTRPKPLIEVAGRPLVDHTLDLARAVSPPRIVANLHYLAPLLAAHLA
PQGVLLSHEQPDILDTGGGLRQALPLLAAETVFTANSDAIWSGPNPFALLAEAWEPARMDALLMCVPVGQ
AIGHAGHGDFSRDAQGRIERGPGLIYGGVQIVKTGGLGDFDMPAFSLNLLWNRIGAAGRLFALEYPGRWC
DVGHPGGIALAEEMLRDV
>gi|56698683|ref|YP_169060.1| hypothetical protein SPO3872 [Ruegeria pomeroyi DSS-3]
MFDPCPHPRVFALPPGVDFPRALVQGLRQRAAGQAPHVLARAQVVVNTHRMERRIRALFDAGPATLLPRV
SLVTDLTALGAVTHLPPAIPPLRRRLELVQLITRLLDQQPDLAARASIFDLSDSLAALIDEMQGEGVSPA
IIRALDVSDQSGHWARAQQFIAIAEHYLRSGDDELDVQARQRRVVEALIAEWALRPPEHPVILAGSTGSR
GTTMLLMEAVARLPQGAVVLPGYDFDQPERVWDGLEDALTAEDHPQFRFARLMARLNLTPDQIAPWSDDV
APCPARNRLVSLALRPAPVTDAWMSEGPQLEGIDTATRDITLIEAASPRDEALAIALRLRQAAEDGQSAA
LITPDRMLTRQVSAALDRWNILPDDSAGLPLHLSPPGRFLRHVAALFSARLDGEALLSVLKHPLCHTGEG
RNEHLLHTRDLELDLRRNGPPFPGVGDLAAFATRREVPEGWTNWVARCFCDQHVTGTLPLIDWVDRLRQL
AEALSAGTEGGTGSLWEQKAGQEALAIVTALADEAPHGGEMDARDFADLLGGLLSTGEVRDRDAPYPGIM
IWGTLEARVMGAELLILGGLNEGSWPESPAPDPWLNRRMRHDAGLLLPERRIGLSAHDFQQAIGAPEVWL
TRAKRSDDAETVPSRWLNRLTNLLQGLPDQGGAAALSEMRARGRRWLSMAEALEEAPRSAPAPRPSPRPP
LAARPRQLSVTEIKKLIRDPYAIYARHVLRLKPLDPLVQAPDALLRGIVIHEILESFVRDSVLDMALLNR
DTFLKRAATMLEELVAWPTARALWLARLDRVADAFLLSEEARRADAGPIAFEARMRKQLDGLDFTLTGRA
DRIDRTERGSLCLYDYKTGAPPSEKQQAKFDRQLLIEAALAEEGGFEGIDPAPVARAVFIGMGGSYKEVP
APLDAEPPARVWAELHQLIGAYFEPDQGFTARRMLHKDSDAGDYDHLARFGEWDRSATSEPEDLT
>gi|56698684|ref|YP_169061.1| ATP-dependent DNA helicase UvrD [Ruegeria pomeroyi DSS-3]
MSARNAATERQVQAARPDTSTWLAANAGSGKTKVLTDRVARLLLSDVQPQHILCLTYTKAAASEMQNRLF
KRLGEWAMLADAPLRAQLSDLGVPGAIDDARLAHARTLFARAIETPGGLKIQTIHSFCATLLRRFPLEAK
VSPQFSEMEDRAAALLREEIVEDLAAGPQAALVSDLARHITDTDFASLTAAICQQRAAFAQPLDWAGLLT
LFDLPEGFDTQALLSSVFLGGEVELIRALLPALMGSGSNDQKAAARLAAFTRPTLDGLIVLEQVLLTGAS
AKSPFSAKIDSFPTKGLRQGALARQMPQLEALMLRVEAARDQRLALAAAQKSLALHRFAAVFLPEYDRRK
QLRGWLDFDDLILKARQLLTDPSVAAWVLYRLDGGIDHILVDEAQDTSPEQWDVIEKLAQEFTSGEGARS
GVERTIFVVGDKKQSIYSFQGADPDAFDRMQGEFGRKLRDSGSNLEDLTLEFSFRSSSAILGLVDLVFRD
RAQAGFRKESLHRAFKSDLPGRVDLWPLIDKVEDEEDGDWTDPVDRPGARHHTVILAERVAGQIREMIDR
GETIPVDGETPGTFARRRVRPGDFLILVQRRSDLFAEIIRACKAAGLPIAGADRLKVGAELAVKDLAALL
SFLATPEDDLSLATVLKSPLFGWSEQRLFDLAHRRSERYLWAALRARRAEFAETLAVLDDLRGQTDFLRP
YDLIERILTRHDGRRKLLGRLGAEAEDGINALLSQALAYERSDIPSLTGFLVWMQTDDLEIKRQMTGVGD
MIRVMTVHGSKGLEAPIVILPDTAQRRAPRDAEIMLAEGTPLWRVPRDSSPALLSTAREAAQSREMNERL
RLLYVALTRAEKWLIVAAAGDLGSDGNSWYQAVANAMAEAGATGTEGDILRLEHGDWTAPALVEERATPY
TAETPPDWASRPAPAPVAAVKTIAPSDLGGAKALPGEAGQDEEAAKARGSQLHLLLEHLPGTDPAGWQDH
ARRLLPDLDALLRDDLLAEARGVLNSPALAEIFAPGTLAEVPITAPLGARRLHGVIDRLLIGDSEIGVVD
FKSNAVVPARPEACPEGLLRQMGAYAYALEQVYPGHTIRTGILWTRTAQIMWLPHDLVAAALGRIQIS
>gi|56698685|ref|YP_169062.1| thioredoxin [Ruegeria pomeroyi DSS-3]
MSTVAVTDATFDAEVKNSDIPVVVDFWAEWCGPCKQIGPALEELATEYAGKVKIAKVDVDSNPNAAAAMG
VRGIPALFIFKDGQVVSNRAGAAPKAALQNWIDSSI
>gi|56698686|ref|YP_169063.1| hypothetical protein SPO3875 [Ruegeria pomeroyi DSS-3]
MAKTRVLVEFGMGSSLRREDYTEAALRALKDALWHNSVNMAELFGFPKEAMIVDAEIGVQRPEAVDNVAL
AAVFPYGQPNITVRQGGLDIDKPQGGGRTVIANAAVVVSFDMEAVG
>gi|56698687|ref|YP_169064.1| hypothetical protein SPO3876 [Ruegeria pomeroyi DSS-3]
MSDHRMILEMGTGNDLYGQDYTKAARRAVQDALHHSSITLFSKLGIDHGQMRVQVTIGVQRPDQVDCDAV
AAELPRGVATVCAVLGGLDVADPDAGTHHVVATAAIEAYLPSLAGKYQLTRNDPV
>gi|56698688|ref|YP_169065.1| transcriptional regulator/arsenate reductase [Ruegeria pomeroyi DSS-3]
MSRRDSAKGLVRILYFDKTRNMEITIPLRLSTLGHPQRLAVFRLLMRRYPGRVAAGEIGTALDVKPSTLS
SYLSALVQVGLVTQTREGTSLLYQVDMDGMRETMNGLFLDCCRGRPELCAPTDLSNFATSPLMTHPAFNV
LFICTGNSARSIFAETLLRDEGGDRFNVFSAGTRPYSELNPHAVEVLRAKGHDVTRLRAKNIAEFTTPET
PKFDFVFTVCDRAANEECPAWQGQPISAHWGMPDPVKAEGNGAQKSLAFQQVYGTLRNRIRAFANLPFEQ
LDRISLQRAVDDLGREA
>gi|56698689|ref|YP_169066.1| glyceraldehyde-3-phosphate dehydrogenase, type I [Ruegeria pomeroyi DSS-3]
MTVYALNGLGRMGKLALKPLLERGAEIAWINDAVGSPEMFAHLLEFDTVHGRWQAEFGWDDQSITIDGTR
IPVHTSRRIEDLPLNGVDVVIDCTGVFKTEAKLTPYFDAGVKKVVVSAPVKDGDTANIVYGVNHDIYEPA
RHRIVTAASCTTNCLAPVVKVLHEGVGIKHGSITTIHDVTNTQTIVDRPAKDLRRARSALNSLIPTTTGS
ATAITLIYPELKGKLNGHAVRVPLLNASITDCVFEVARDTSAEEVNALFKAAAEGPLNGILGYEERPLVS
ADYTNDPRSSIVDAPSTMVVNGTQVKIYAWYDNEMGYAHRLVDVAIMVGDSL
>gi|56698690|ref|YP_169067.1| hypothetical protein SPO3879 [Ruegeria pomeroyi DSS-3]
MTRAPSERGGLSAYIAVTAAYWAFMLTDGALRMLVLLHFHMMGFSPVQLAYLFVLYEVAGMVTNLSAGWI
AARFGLAATLYAGLALQVGALVALSQLDPGWQIATSVAFVMVVQGLSGVAKDLAKMSSKSAVKLLAPKQG
DGLFRWVAVLTGSKNAVKGVGFLLGAVLLGFAGFTAATLGMAAILAVILLAVLVAMPAGLPKGRKGAKFS
EVFSKSANINWLSAARVFLFGARDVWFVVGIPVYFYAVLSDGSEAGNRAAFFMIGSFMAGWIVFYGAIQA
SAPRLLRAASRGEDGLIAAARHWAAWLALVPAVLTGATLISSGPQPWLTAVLVSGLLVFGALFAVNSSLH
SYLILAFSKDERVTMDVGFYYMANAAGRLLGTLLSGLTYQLGGVPACLGTAAVMVALSALAAGRLQVAPT
PRSA
>gi|56698691|ref|YP_169068.1| ATP-dependent protease peptidase subunit [Ruegeria pomeroyi DSS-3]
MADDQFPGWHGTTIIGVKKGGEVVIAGDGQVSLGQTVIKGTARKVRRLSPGGYHVVAGFAGSTADAFTLL
ERLEAKLEATPGQLARASVELAKDWRTDKYLQKLEAMLIVSDGQDMFVITGAGDVLEPEHDVAAIGSGGN
FALAAARAMMDSDKSAEEVARAAMAIAADICVYTNGNLTVEKIAK
>gi|56698692|ref|YP_169069.1| twin-arginine translocation pathway signal sequence domain-containing protein [Ruegeria pomeroyi DSS-3]
MITRRSLFATAAGVAVALASSTAAFAGGTKGHFEGRSNHVTSGSVKLVKDGERYVVELGDDFSLDGGPDP
RVAFGKDGKYDPDTKLGALLSLTGKQRYAVPPTWDVSAYNEVYIWCDVAGVPLGVAKIN
>gi|56698693|ref|YP_169070.1| ATP-dependent protease ATP-binding subunit HslU [Ruegeria pomeroyi DSS-3]
MTDLTPREIVSELDRFIIGQKDAKRAVAVALRNRWRRKQLADDLRDEVYPKNILMIGPTGVGKTEISRRL
AKLARAPFIKVEATKFTEVGYVGRDVEQIIRDLADAAIVQTRDYMRDEVRARAHKAAEDRVITAIAGEDA
REGTREMFRKKLKSGELDDTVIELEVADGANPMPMFEIPGQPGGNMGMMNLGDLFGKAFAGRTTRKKLRV
ADSYEILIGEEADKLLDDELVNKTALEAVEQNGIVFLDEIDKVCARSDARGADVSREGVQRDLLPLIEGT
TVSTKYGPIKTDHILFIASGAFHIAKPSDLLPELQGRLPIRVELRALTEEDFVRILTETDNALTLQYTAL
MGTENVAVTFTPDGIAALAHIAAEVNQSVENIGARRLYTVMERVFEELSFTAPDRSGEAVTVDAGFVDTN
LGELTRSTDLSRYVL
>gi|56698694|ref|YP_169071.1| putative lipoprotein [Ruegeria pomeroyi DSS-3]
MRIRVAIILSVALLSACTDRSYTPITPEALAVGSPATIFAATTRVQKDDGSFGPDRADNLSLLELTVSIP
PDRRPGRLDFGYGRANPEKQFILAGQTVFDQPEAFRARLKQELARQPAGQRELTLFVHGFNSTQTETAYR
AAQLAHDIEMPGSLMVYSWPSKGHALGYAYDADSTVFARDGLETVLRRLGEQRIDRLAVVAHSMGSFLLM
EALRQIEIATPGWSARHLDGVILISPDLDLDVFRSQMRRIKTVPQPFVVMASEKDNVLNLSRHLRGKQSS
ERLGQIGSAALITDLPVAVIDTSQFSDEAESGHFIAATSPTLLAMIAEARNMTDLFEAGNVPLERAFPGI
VSYARDTLDVVIENNDR
>gi|56698695|ref|YP_169072.1| smr domain-containing protein [Ruegeria pomeroyi DSS-3]
MTRRKLTRDEIDLWRKVVRQADRLHPERVDGVHPQTLPKPKPTKPLPVPLEPFELGQAARAKPGRHALSP
SLSERLSRTPVQMDPKAYTRMRRGKLKPEGKLDLHGMRVDTAHPALIRFILTAQSQGKRLVLVVTGKGKY
RDEPGPIPTPRGVLRHQVPQWLSLPPLAQAVLQVTPAHISHGGEGAYYVYLRRNRG
>gi|56698696|ref|YP_169073.1| MltA/3D domain-containing protein [Ruegeria pomeroyi DSS-3]
MIGALRSAVLAGAMMTASAGAAETTHTVLSFAQLDGWAEDDHAAALSTFLNTCDQFNDPDWRSLCAMARE
ATPETARGFFELLFRPVLIEDGQDALFTGYFEPELEGARFPSSRFRYPVYKMPPEARASNPWLERRQILT
SGVMDNRGLEIAWVDDPVELFFLQIQGSGRIRLPDGQTVRVGYGGANGHPYRSIGVELVRRGVYSAHQVS
AQVIKNWVRRNPEAGTELLYHNPSYVFFRELRHLPSDLGPVGAMNRSVTPLRSIAVDPAYTPLGAPVWVE
KNGAGLMRRLMVAQDTGSAIKGAQRADIFFGTGDAAGQAAGTLRDPGRMVVLLPIQRAYALLPDGY
>gi|56698697|ref|YP_169074.1| Tim44 family protein [Ruegeria pomeroyi DSS-3]
MNSPLIQLLVLAGIAIFLILRLKSVLGTREGFEKPPVPQQPENRTRRDFEVIEGGPDRDITDHVPEDSPQ
AQALAAMKRIEPAFSVSEFVQGARGAYEMIVMGFERGNLDEIEPFLTEEVFETFVGVVAAREDQGLTIEA
EFIGVRETSIQDVHFDKDSNRGEITMRFVGELTSVVRDRGGDVIEGSPTAVKRQKDVWTFARVMGTDDPN
WLLVATDA
>gi|56698698|ref|YP_169075.1| FxsA [Ruegeria pomeroyi DSS-3]
MYLFLAFLLVPIIEIALFIQVGGLIGLWPTLAIVVLTAVLGTWLVRTQGRMALGQLNRAFNQLDDPTEPL
AHGAMILFSGALLLTPGFFTDALGFALLVPGVRVAVYRYLRARIQVASFQMGPGMRQPHRDAGDVIDGEW
EEVRPHRERGAGPSGWVEGPDRH
>gi|56698699|ref|YP_169076.1| preprotein translocase subunit SecB [Ruegeria pomeroyi DSS-3]
MAETDAAAAQQPPQIQMRVLGQFIRDMSFENVMAQRGASGDVQPDVNVQVNLDAKKRSTDNQYEIAIKLN
ITSKAKGMDDVLFVFEIDYCGIFHVEGVPNEQLHPFLLIECPRMLFPFLRRIVSDITRDGGYPPLNLDNI
DFMALYRSELARQQAAAQAEQKADA
>gi|56698700|ref|YP_169077.1| DNA polymerase III, epsilon subunit [Ruegeria pomeroyi DSS-3]
MREIVLDTETTGFDPETGDRIVEIGAVELWNHIATGNTYHQYINPERMMPAEAFGVHGIGPDILEPPQQP
EPGQVTLRDKPVFAKVGQAFRDFVADSHLVIHNASFDMKFLNAELRWMGLPEIPFDRAIDTLGMARRKFP
GSPATLDALCRRFGIDNSNRVLHGALLDAEILAEVYLELIGGKQPDFGLSTVTTGDGPGQETAWRAMPRP
TPLPARITEAERTAHAEFVEKLGENAVWKRA
>gi|56698702|ref|YP_169078.1| dephospho-CoA kinase [Ruegeria pomeroyi DSS-3]
MTFRLGLTGSIGMGKSTTAQMFVDEGCALWDADAAVHRLYSSGGAAVAPMRAAFPDAVVDDAVSRPVLKH
IIAEDPQALKRIEAIVHPLVAEDRARFRDSATADILVFDIPLLFETGGEAAMDAVACVSIPPEEQKARVM
ARGTMTEAQFEQIRAKQMPNEEKCARSDFVIVTDTLDHARAQVQDIVRQIRAGNIHA
>gi|56698701|ref|YP_169079.1| shikimate 5-dehydrogenase [Ruegeria pomeroyi DSS-3]
MTENRIPLAGVIGHPISHSKSPRLHGHWLKTYGINGHYIPMDVAPQDLAQVVRTLPKAGFVGVNITIPHK
EAVMSVADQITDRATLIGAVNTLIFREDGRILADNTDGYGFMENLRAGAPGWDPKSGPAVVFGAGGAARA
VISALAEAGVPEVIVTNRTRVRADKLKDDFGQRVTVADWVQAGNVIEDARLVVNTTSLGMIGKPELRVPL
DGLRADAVVTDLVYAPLKTRLLAEAEEMGCTTVDGLGMLLHQAVPGFERWFGERPVVDAATRAAALR
>gi|56698703|ref|YP_169080.1| hypothetical protein SPO3892 [Ruegeria pomeroyi DSS-3]
MTVPLILASGSAIRAQLLENAAVPFTKDVPRVDEESVKAALLAESAPPRDIADALAEMKARKISDKHPGA
MVLGCDQVLDFQGRLLSKPDSPETALAELKQMSGQRHMLLSAAVIYENGQPVWRHVGQVRLRMRALSDSY
LSGYVARNWDSIRHAVGGYKLEEEGVRLFSTIDGDHFNVLGMPLLELLNFLALRGVIDT
>gi|56698704|ref|YP_169081.1| hypothetical protein SPO3893 [Ruegeria pomeroyi DSS-3]
MMTDLLFTLYPWVKSLHIMAVISWMAGLFYLPRLFVYHVEKAEKVQEAPAIFHEMEEKLVRVIMRPAMIV
SWVCGLIMVLTPGIVDWGEVWPWTKGASVIAMTWFHEWLNARRKGFLAGQNRLTGRQYRMMNEVPTLLMV
VIVLSVIVKF
>gi|56698705|ref|YP_169082.1| transcription termination factor Rho [Ruegeria pomeroyi DSS-3]
MTIESLNLADLKAKSPKDLLSMAEELEIENASTMRKGEMMFQILRERADEGWTIGGDGVLEVLQDGFGFL
RSPEANYLPGPDDIYVSPDMIRQYSLRTGDTVEGEIKAPDDSERYFALTNVTMINFEDPEKARHKIAFDN
LTPLYPDERLKMEIEDPTIKDRSARVIDLVAPIGKGQRSLIVAPPRTGKTVILQNIAHSIERNHPECYLI
VLLIDERPEEVTDMQRSVKGEVVSSTFDEPATRHVAVSEMVIEKAKRLVEHKRDVVILLDSITRLGRAFN
TVVPSSGKVLTGGVDANALQRPKRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSELVL
DRKIADKRVFPAIDILKSGTRKEDLLVDKGDLQKTFVLRRILNPMGTTDAIEFLLSKLKQTKTNGEFFDS
MNT
>gi|56698706|ref|YP_169083.1| tRNA modification GTPase TrmE [Ruegeria pomeroyi DSS-3]
MDTIFALATAQGKAGVAVIRLSGPRAYHTACLLAGPDLPSRGLSVRQLKDSQGARLDDGVVLTFAAPASF
TGEDVAEFQIHGSLATTEAVLRCLGDLDGLRLAEPGEFTRRALENGKMSLPQVEGLADLIDAETEAQRKQ
AQAVLNGALGQLAEGWRAKLIRAAALLEAVIDFADEEVPTDVSPEVRALLAEVRADLEHEIAGVRIAERI
RTGFEVAIIGPPNAGKSTLLNMLAGREAALTSEVAGTTRDVIEVRMDLGGLPVTLLDTAGLRETGDLVEG
MGIALARRRADQADLRVFLTEDVDAMGVELQPDDLHVLPKADQRPDTANAISGVTGQGVDQLVQRISDVL
KTRSSSAGIATRERHRVAMKTALDALDRTGTVLESGPDLYDIAAEELRTAIRALESLVGRIGVETLLDEI
FASFCLGK