| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is pimE [H]
Identifier: 38234598
GI number: 38234598
Start: 2089327
End: 2090487
Strand: Direct
Name: pimE [H]
Synonym: DIP2040
Alternate gene names: 38234598
Gene position: 2089327-2090487 (Clockwise)
Preceding gene: 38234597
Following gene: 38234602
Centisome position: 83.95
GC content: 59.86
Gene sequence:
>1161_bases ATGGTCGGTATGAAAAGTGCACCCTCAATCACCGCCATGTTCACTGCGTTGTTTGCGTGGTTTTTGGTGCAACAGTCATC GCTGGGCTCCAACCGGCGCTTTAGCGAATGGTTCCCACCCCTCGACCTAGCGATCTACAAGAAGGCCGGCCTGGTGCTCG ACCGCGGCGGCCACCTCTACGACCGCGTGTTTTACCACGACCTCGGCTTTACCTACACCCCGTTTGCTGGCTTGATCTTT AAGTTCTTGTCCCGCATGGATGACAACATGCTGACCGTCGTGTGGCAAAGCGCGAACTTTGTGGCCCTGCTCGCGGTCAT CCTGATGATCTTTGCGCGCAAGCAGCTCACCGCCGGTGGGGTCATCGCAGCAATCGCCATGGCCGCAGGCTTTATGGCGC TGATCGAAATCCGCGACAGCTTTTTCTACGGGCAGATCAACCTGCTGCTCATGTTCCTCGTGGCCATGGACTTCCTGCCG CACAAGCGCACCGGCATCGGAATCGGGCTTGCTGCGGGTATCAAACTCACCCCCGCGATCTTTATTGTGGTGCTTCTCAT TCAACGACGCTGGTGGTCGGCGGCAAGTGCGGTGGTCACCTTCGCGGCGACGGTCGCTACGGGCGTGTGGGTGCCAGACG CGTGGGATTTCTGGACCAATAAGATCTTTGATTCCTCGCGCGTGGGCACCCAAACCAACCCTGGTGCGCAGTCGCTTCGT GCGGTGCTCGTGCGTCTCGACGCAGAACAGTACTGGATTCCCGCCATCATCGCCGTCCTCCTCGTGGCCGGCTTCGGATT CTGGCGGGCGCGCAACAACCCTGCCATGTCGCTGGCTCTAGGTGGCATTACTGCCTGCTTGGTGTCGCCGTTTAGCTGGT ATCACCACTGGGTGTGGGTCGTACCGGCGGTCGTGGCTATCTTTATCGCCATGGACTTCTCGCACTGGGCGCTCGCCCAG CTCGGCGCGGTGGCCGCAGCCGCGATCTCCGTGGCGATGTTCTCCCCGCACCTGCTGTTTTTCCACGACTGGTTCAAAGA CTGGTTCTGCGTATCGGGCTTGGTGTTCGTCGCAGGCTATGCGATCATCAGCCCGATCGCGGGTTACATCTCGGCGAGGA CGGCGTCGACAACCGGCAGCCAAGAACCTGTTTCTTTGTAA
Upstream 100 bases:
>100_bases AGGACGCCCCTCCGGGAAACGTCGTTAAGGTGCAAAAATTGCTCACCGCACCCACTAACCCCGCGCCGCGTTTCTCCATC CGTGCAAAAATCCTGTTTTA
Downstream 100 bases:
>100_bases ATAGCGCGCTGCCGCTGGTAGCTGGCTCCCGTCTGGCAAATGGTGAGCACGCCTTGGAGTTCGTCGTAGCAGCCGAGCTC ACGGGCAAGCGGGCTGAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Alpha-mannosyltransferase; Alpha-manT; PPM-dependent mannosyltransferase; Polyprenol-phosphate-mannose alpha-mannosyltransferase; PPM alpha-mannosyltransferase [H]
Number of amino acids: Translated: 386; Mature: 386
Protein sequence:
>386_residues MVGMKSAPSITAMFTALFAWFLVQQSSLGSNRRFSEWFPPLDLAIYKKAGLVLDRGGHLYDRVFYHDLGFTYTPFAGLIF KFLSRMDDNMLTVVWQSANFVALLAVILMIFARKQLTAGGVIAAIAMAAGFMALIEIRDSFFYGQINLLLMFLVAMDFLP HKRTGIGIGLAAGIKLTPAIFIVVLLIQRRWWSAASAVVTFAATVATGVWVPDAWDFWTNKIFDSSRVGTQTNPGAQSLR AVLVRLDAEQYWIPAIIAVLLVAGFGFWRARNNPAMSLALGGITACLVSPFSWYHHWVWVVPAVVAIFIAMDFSHWALAQ LGAVAAAAISVAMFSPHLLFFHDWFKDWFCVSGLVFVAGYAIISPIAGYISARTASTTGSQEPVSL
Sequences:
>Translated_386_residues MVGMKSAPSITAMFTALFAWFLVQQSSLGSNRRFSEWFPPLDLAIYKKAGLVLDRGGHLYDRVFYHDLGFTYTPFAGLIF KFLSRMDDNMLTVVWQSANFVALLAVILMIFARKQLTAGGVIAAIAMAAGFMALIEIRDSFFYGQINLLLMFLVAMDFLP HKRTGIGIGLAAGIKLTPAIFIVVLLIQRRWWSAASAVVTFAATVATGVWVPDAWDFWTNKIFDSSRVGTQTNPGAQSLR AVLVRLDAEQYWIPAIIAVLLVAGFGFWRARNNPAMSLALGGITACLVSPFSWYHHWVWVVPAVVAIFIAMDFSHWALAQ LGAVAAAAISVAMFSPHLLFFHDWFKDWFCVSGLVFVAGYAIISPIAGYISARTASTTGSQEPVSL >Mature_386_residues MVGMKSAPSITAMFTALFAWFLVQQSSLGSNRRFSEWFPPLDLAIYKKAGLVLDRGGHLYDRVFYHDLGFTYTPFAGLIF KFLSRMDDNMLTVVWQSANFVALLAVILMIFARKQLTAGGVIAAIAMAAGFMALIEIRDSFFYGQINLLLMFLVAMDFLP HKRTGIGIGLAAGIKLTPAIFIVVLLIQRRWWSAASAVVTFAATVATGVWVPDAWDFWTNKIFDSSRVGTQTNPGAQSLR AVLVRLDAEQYWIPAIIAVLLVAGFGFWRARNNPAMSLALGGITACLVSPFSWYHHWVWVVPAVVAIFIAMDFSHWALAQ LGAVAAAAISVAMFSPHLLFFHDWFKDWFCVSGLVFVAGYAIISPIAGYISARTASTTGSQEPVSL
Specific function: Catalyzes the alpha-1,2 addition of a mannose residue from polyprenol-phosphate-mannose (PPM) to a monoacyl phosphatidylinositol pentamannoside (AcPIM5) to generate a monoacyl phosphatidylinositol hexamannoside (AcPIM6) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PIGM family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018584 [H]
Pfam domain/function: PF09594 DUF2029 [H]
EC number: NA
Molecular weight: Translated: 42458; Mature: 42458
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGMKSAPSITAMFTALFAWFLVQQSSLGSNRRFSEWFPPLDLAIYKKAGLVLDRGGHLY CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHCCEEEECCCCHH DRVFYHDLGFTYTPFAGLIFKFLSRMDDNMLTVVWQSANFVALLAVILMIFARKQLTAGG HHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCH VIAAIAMAAGFMALIEIRDSFFYGQINLLLMFLVAMDFLPHKRTGIGIGLAAGIKLTPAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHCCCCCHHHHH FIVVLLIQRRWWSAASAVVTFAATVATGVWVPDAWDFWTNKIFDSSRVGTQTNPGAQSLR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHH AVLVRLDAEQYWIPAIIAVLLVAGFGFWRARNNPAMSLALGGITACLVSPFSWYHHWVWV HHHHHHCCCHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VPAVVAIFIAMDFSHWALAQLGAVAAAAISVAMFSPHLLFFHDWFKDWFCVSGLVFVAGY HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH AIISPIAGYISARTASTTGSQEPVSL HHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MVGMKSAPSITAMFTALFAWFLVQQSSLGSNRRFSEWFPPLDLAIYKKAGLVLDRGGHLY CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHCCEEEECCCCHH DRVFYHDLGFTYTPFAGLIFKFLSRMDDNMLTVVWQSANFVALLAVILMIFARKQLTAGG HHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCH VIAAIAMAAGFMALIEIRDSFFYGQINLLLMFLVAMDFLPHKRTGIGIGLAAGIKLTPAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHCCCCCHHHHH FIVVLLIQRRWWSAASAVVTFAATVATGVWVPDAWDFWTNKIFDSSRVGTQTNPGAQSLR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHH AVLVRLDAEQYWIPAIIAVLLVAGFGFWRARNNPAMSLALGGITACLVSPFSWYHHWVWV HHHHHHCCCHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VPAVVAIFIAMDFSHWALAQLGAVAAAAISVAMFSPHLLFFHDWFKDWFCVSGLVFVAGY HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH AIISPIAGYISARTASTTGSQEPVSL HHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]