Click here to switch to the map view.

The map label for this gene is 38234458

Identifier: 38234458

GI number: 38234458

Start: 1938402

End: 1938977

Strand: Direct

Name: 38234458

Synonym: DIP1888

Alternate gene names: NA

Gene position: 1938402-1938977 (Clockwise)

Preceding gene: 38234454

Following gene: 38234460

Centisome position: 77.89

GC content: 54.17

Gene sequence:

>576_bases
ATGGCTGTTCATTTGACAAAGATCTACACACGTACTGGCGACGACGGCACGACTGCATTGTCCGATTTTTCTCGAGTTTC
TAAAAACGATCCACGCCTTGCGGCCTATGCGGATTGCGATGAATTGAATGCGTCGATAGGCCAAGCTCTTGCATTAACGA
CGCTTCCCGAGGAGGTGGTCACCGTACTAAAGCGTGTCCAAAACGAGCTTTTCGACGCCGGCGCGGACCTATCCACTCCG
ATCCAGGAAAATCTTAAATACCCACCACTACGTATTGAGCAAAGCTACATCGACGCCCTCGAAGCCGACTGTGATCGATT
TAACGAGCAGCTCGAAGCACTCAATTCCTTTATTTTGCCAGGCGGTACCCCAGGAGCAGCGATGCTGCACGTTGCCCGCA
CCATCGCACGCCGCGCAGAGCGCGCCGCATGGGCAGCAGTCGAGGCAGTTCCCGAGACTACTTCGGTACTTCCTGCACGT
TACCTCAACCGTCTAAGCGATTTGCTGTTCATCATGTCGCGACTCGCGAACGACAGCAACGACGTGAAATGGGTTCCAGG
CGGAAGCCGCACATAA

Upstream 100 bases:

>100_bases
CCGCTGACATGGACGGTTCCTTCAAGTCGAGCACCGCCGGTAACTAGAAATCTTTCCTTCACCCCTCCAACCCTACTGAG
TTATCGCGTAGGTTTGGAGT

Downstream 100 bases:

>100_bases
AAAAGACCTCGGATATTTCCACGAGAAGTATCCGAGGTAATGTGTTTTCGCCTTAAGGCAGTGCGCCGATACGACGAGCT
GCGTTGACAGCCTCGTAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: Cob(I)alamin adenosyltransferase [H]

Number of amino acids: Translated: 191; Mature: 190

Protein sequence:

>191_residues
MAVHLTKIYTRTGDDGTTALSDFSRVSKNDPRLAAYADCDELNASIGQALALTTLPEEVVTVLKRVQNELFDAGADLSTP
IQENLKYPPLRIEQSYIDALEADCDRFNEQLEALNSFILPGGTPGAAMLHVARTIARRAERAAWAAVEAVPETTSVLPAR
YLNRLSDLLFIMSRLANDSNDVKWVPGGSRT

Sequences:

>Translated_191_residues
MAVHLTKIYTRTGDDGTTALSDFSRVSKNDPRLAAYADCDELNASIGQALALTTLPEEVVTVLKRVQNELFDAGADLSTP
IQENLKYPPLRIEQSYIDALEADCDRFNEQLEALNSFILPGGTPGAAMLHVARTIARRAERAAWAAVEAVPETTSVLPAR
YLNRLSDLLFIMSRLANDSNDVKWVPGGSRT
>Mature_190_residues
AVHLTKIYTRTGDDGTTALSDFSRVSKNDPRLAAYADCDELNASIGQALALTTLPEEVVTVLKRVQNELFDAGADLSTPI
QENLKYPPLRIEQSYIDALEADCDRFNEQLEALNSFILPGGTPGAAMLHVARTIARRAERAAWAAVEAVPETTSVLPARY
LNRLSDLLFIMSRLANDSNDVKWVPGGSRT

Specific function: Unknown

COG id: COG2096

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Cob(I)alamin adenosyltransferase family [H]

Homologues:

Organism=Homo sapiens, GI16418349, Length=178, Percent_Identity=36.5168539325843, Blast_Score=95, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI115534154, Length=174, Percent_Identity=33.9080459770115, Blast_Score=82, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017858
- InterPro:   IPR002779
- InterPro:   IPR016030
- ProDom:   PD007457 [H]

Pfam domain/function: PF01923 Cob_adeno_trans [H]

EC number: =2.5.1.17 [H]

Molecular weight: Translated: 20892; Mature: 20761

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVHLTKIYTRTGDDGTTALSDFSRVSKNDPRLAAYADCDELNASIGQALALTTLPEEVV
CEEEEEEHHHCCCCCHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHCCCHHHH
TVLKRVQNELFDAGADLSTPIQENLKYPPLRIEQSYIDALEADCDRFNEQLEALNSFILP
HHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GGTPGAAMLHVARTIARRAERAAWAAVEAVPETTSVLPARYLNRLSDLLFIMSRLANDSN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DVKWVPGGSRT
CEEECCCCCCC
>Mature Secondary Structure 
AVHLTKIYTRTGDDGTTALSDFSRVSKNDPRLAAYADCDELNASIGQALALTTLPEEVV
EEEEEEHHHCCCCCHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHCCCHHHH
TVLKRVQNELFDAGADLSTPIQENLKYPPLRIEQSYIDALEADCDRFNEQLEALNSFILP
HHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GGTPGAAMLHVARTIARRAERAAWAAVEAVPETTSVLPARYLNRLSDLLFIMSRLANDSN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DVKWVPGGSRT
CEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]