LOCUS NC_002253 7786 bp DNA circular BCT 18-JUL-2008 DEFINITION Buchnera aphidicola str. APS (Acyrthosiphon pisum) plasmid pLeu, complete sequence. ACCESSION NC_002253 VERSION NC_002253.1 GI:10957103 DBLINK Project:245 KEYWORDS . SOURCE Buchnera aphidicola str. APS (Acyrthosiphon pisum) ORGANISM Buchnera aphidicola str. APS (Acyrthosiphon pisum) Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Buchnera. REFERENCE 1 (sites) AUTHORS Shigenobu,S., Watanabe,H., Hattori,M., Sakaki,Y. and Ishikawa,H. TITLE Genome sequence of the endocellular bacterial symbiont of aphids Buchnera sp. APS JOURNAL Nature 407 (6800), 81-86 (2000) PUBMED 10993077 REFERENCE 2 (bases 1 to 7786) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (10-SEP-2004) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 7786) CONSRTM NCBI Microbial Genomes Annotation Project TITLE Direct Submission JOURNAL Submitted (17-JAN-2000) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AP001071. COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..7786 /organism="Buchnera aphidicola str. APS (Acyrthosiphon pisum)" /mol_type="genomic DNA" /strain="APS" /isolate="Tokyo1998" /host="Acyrthosiphon pisum" /db_xref="taxon:107806" /plasmid="pLeu" /note="leucine plasmid; primary endosymbiont of Acyrthosiphon pisum" gene complement(346..1197) /gene="repA1" /locus_tag="BUpL01" /db_xref="GeneID:1109453" CDS complement(346..1197) /gene="repA1" /locus_tag="BUpL01" /codon_start=1 /transl_table=11 /product="replication-associated protein RepA1" /protein_id="NP_057965.1" /db_xref="GI:10957104" /db_xref="GeneID:1109453" /translation="MIIRKCYINNPNPFFTPPKNNKRRPSFICYAMKRASEIDVARCE LNYILQIKNIKIGFPVKRFRRLNEHRACAMRAMVLAMLYHFNISSDLVQASVEQLSDE CGLSTLSKAGNKSITRASRLITNFMEPMGFVTCKKTWDKILGNYMPKMITLTPLFFML FGVSEKKLMDAKKQQLGWINKNLISKGFKPITMIDAKRRSKDTQIKNIFQYRISKHAF YKKKRNAQRLISLDEKEARQTILRALVAKYSITELTKLGPNGLKKQVNISYYYLRKIA TNTYPDN" gene 1514..2017 /gene="yqhA" /locus_tag="BUpL02" /db_xref="GeneID:1109454" CDS 1514..2017 /gene="yqhA" /locus_tag="BUpL02" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_057966.1" /db_xref="GI:10957105" /db_xref="GeneID:1109454" /translation="MEKIIEKSIYASRWLMFPVYVGLSFGFILLTLKFFQQIVFIMPD IVAMSESGLVLVVLSLIDIALVGGLLVMVMFSGYENFISKMDIQDNQKRLGWMGTMDV NSIKNKVASSIVAISSVHLLRLFMEAEKILDDKIMLCVIIHLTFVLSAFGMAYIDKMS KKKHILH" gene 2357..2893 /gene="RepA2" /locus_tag="BUpL03" /db_xref="GeneID:1109448" CDS 2357..2893 /gene="RepA2" /locus_tag="BUpL03" /codon_start=1 /transl_table=11 /product="replication-associated protein RepA2" /protein_id="NP_057967.1" /db_xref="GI:10957106" /db_xref="GeneID:1109448" /translation="MRAIVPAMLYYFNINSKLVEASIEKLADECGLSTLSDSGNKSIT RASRLISEFLEPMGFVKCKKINSKSMSNYIPKKIFLTPMFFMLCGISPSEINHFLSKK IKPLKKLKKQEKSAFISFTDMKIISQLDERSARTKILNALINYYTASELTKIGPKGLK KKIDIEYSNLCNLYKKKS" gene 3032..4591 /gene="leuA" /locus_tag="BUpL04" /db_xref="GeneID:1109449" CDS 3032..4591 /gene="leuA" /locus_tag="BUpL04" /EC_number="2.3.3.13" /note="catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis" /codon_start=1 /transl_table=11 /product="2-isopropylmalate synthase" /protein_id="NP_057968.1" /db_xref="GI:10957107" /db_xref="GeneID:1109449" /translation="MKSKVVIFDTTLRDGEQALQASLSVKEKLQIALSLEKCGIDILE IGFPVSSPGDFKSVQTISKNIKNSRICSLARCIEKDIDAAGEAMSSSDSFRIHIFLAT STLHMESKLKKNFNEIIDMAVFSVKKALRYTDDIEFSCEDATRTTMDNLCRIVETLIK SGVKTINIPDTVGYTVPNELSCIIKNLFERVPNIHKSIISVHCHDDLGMAVGNSISAI QAGARQIEGTINGIGERAGNTALEEIIMAIKVREDILSVSTNINYKEIYRTSKIVSQI CNMPIPSNKAIVGSNAFAHSSGIHQDGVLKNRKNYEIMEPSSIGLKEVKLNLTSRSGR AAVKHYMDEMGYNNSDYNIDELYTAFLKLADKKGQVFDYDLEALAFINKQQDEWEYFS LKFFSVQSISNSLSTASVKLLCGKKTYTESSTTSNGPVDAIYQALNRIACFPIILQKF QLVAKGKGKDALGQVDILVEHKKRKFHGVGLATDIIEASAQAMINVLNNIWKAKQVNK KLKILKDFKKK" gene 4652..5743 /gene="leuB" /locus_tag="BUpL05" /db_xref="GeneID:1109450" CDS 4652..5743 /gene="leuB" /locus_tag="BUpL05" /EC_number="1.1.1.85" /note="catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis" /codon_start=1 /transl_table=11 /product="3-isopropylmalate dehydrogenase" /protein_id="NP_057969.1" /db_xref="GI:10957108" /db_xref="GeneID:1109450" /translation="MKKNYRIAVLSGDGIGPEVMQEACKILNVLKKYFFLSLEIQKFN IGGIAIEREGVALPKTTLLGCENSDSILLGSVGGKKWDNLPVEQRPERAALLPLRKHF NLFSNLRPAKLYPELKCLSPLRSDIVKNGFDILCVRELTGGIYFGEPKGFVNKNNTKY AFDTEIYHEYEIIRIAHLAFKLARSRKKKVCSIDKSNVLQSSILWREVVESVSKKYPD VHLSHLYIDNAAMQIIKDPNQFDVLLCSNLFGDIISDECATITGSIGMLPSASFNEKN FGLYEPAGGSAPDIEGKNIANPIAQILSLSMLVRYGMNLNQIADKIDKAVNNVLKKGY RTSDISHDNNFLKTDEMGDLIVDSLINGE" gene 5733..7160 /gene="leuC" /locus_tag="BUpL06" /db_xref="GeneID:1109451" CDS 5733..7160 /gene="leuC" /locus_tag="BUpL06" /EC_number="4.2.1.33" /note="dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate" /codon_start=1 /transl_table=11 /product="isopropylmalate isomerase large subunit" /protein_id="NP_057970.1" /db_xref="GI:10957109" /db_xref="GeneID:1109451" /translation="MVNDMKKTLYDKIYDSHIVYEEKNNTSLLYIDLHLLHEVTSPQA FDSLRDKNRKVRQPKKTFATMDHNVSTTSQDINASGSMAKVQMQELIKNCSEFNISLY DIKNPNQGIVHVISPEKGMTLPGMTIVCGDSHTSTHGAFGALSFGIGTSEVEHVLATQ TLKQQRFKNMKIEITGEIQKFVTAKDLILFIIGKLGSSGGAGYIIEFCGNVIEKMSME ERMTICNMAIEIGAKSGLIAPDEVTFSYLKNKMYAPRGVFWKKALNFWKNLKSDKNAF FDKVVNINISDLSPQITWGTNPDQVISIDQKIPDFSSFDNLIKKDLAKSACKYMGLKI GTYLTNITVDKVFIGSCTNGRIEDLRAASKILKDKKIANNVKAIVVPGSGSVKREAEN EGLDKIFISAGFEWRLPGCSMCLGMNKDRLNDGERCASTSNRNFEGRQGRGGRTHLVS PIMAAAAAVYGKFVDVRKLYNGENN" gene 7163..7786 /gene="leuD" /locus_tag="BUpL07" /db_xref="GeneID:1109452" CDS 7163..7786 /gene="leuD" /locus_tag="BUpL07" /EC_number="4.2.1.33" /note="catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D" /codon_start=1 /transl_table=11 /product="isopropylmalate isomerase small subunit" /protein_id="NP_057971.1" /db_xref="GI:10957110" /db_xref="GeneID:1109452" /translation="MFKFTGHAGIVVPLDISNIDTDIIIPKQFLKRVNKIGFGKYLFH DWRFIDANQLVKNEDFILNKKIYKNASILLTRENFGCGSSREHAVWSLVDYGFKVIIA PSFADIFYNNSFNNKLLLITLSSSEITFLFDIVKNNIGITFDVSLVEKTVTVNKEVFS FELDDFHYFCLLNDLDNIDLTMKHLSEIKSYESRISDFLLERRDFKS" ORIGIN 1 atgtaattat ttttttaaaa aaatagcgaa gtttttagaa ataaaaaact tcgctatttt 61 tttttaattt aacaagtatg tttttattta tttttttata taagttttaa gaatgttatt 121 ttgcatttat ttatataaga agcatttatt aaaaaaaaca gtatgcattt atttattttt 181 tcaataaaaa aatgtgattc taatgttttt ttttattgaa aaaataaaat aagatgtttt 241 atgataaaaa aaaagggggg gagataattt tacagtggat ttaagaaaca aaaaatatgc 301 gaataaacgc atgcctttaa gaaagaataa atttaaataa aaattttaat tatcaggata 361 agtgtttgta gctatcttgc gtaaataata atagcttata ttaacttgtt tctttaatcc 421 attaggccct aatttagtta attcagtaat agagtatttg gctactaacg ctcgaagaat 481 agtttgtctg gcttctttct catctaatga aatcaagcgt tgtgcatttc tctttttttt 541 ataaaaagca tgcttagaaa ttctatattg aaaaatattt ttaatttgag tatctttaga 601 acgtctttta gcatcaatca tggttattgg tttaaaacct ttactaatga gatttttatt 661 gatccaccct aattgttgtt tcttagcatc cattaatttt ttttcagaaa caccaaagag 721 cataaaaaac aatggggtta atgtgatcat tttgggcata taattgccta atattttatc 781 ccatgttttt ttgcaagtaa caaaacccat aggttccata aaattagtaa ttaatctaga 841 agcacgagta atagatttat tacctgcttt agacaaggta gacaaaccac attcatcaga 901 taattgttca actgatgctt gaaccaaatc agaagaaata ttaaaatggt aaagcatagc 961 taaaaccatg gctctcatag cacatgctcg gtgttcattt aatcttctaa atctttttac 1021 gggaaaacca attttaatat ttttgatctg taaaatataa tttagttcgc atcgagctac 1081 atctatttct gatgctcttt tcattgcata acaaataaaa gatggcctac gtttattatt 1141 tttaggtggt gtaaaaaatg gattgggatt atttatatag cattttctta ttatcataac 1201 atgatactta aaatagtaag tgggttcatt ttttatatat ttcaaatata taaaatttta 1261 tttttattct ttcaataatt aaattttttt atatttaaga atatatactt tacttttatt 1321 tttttttatg aataaatata atttataaaa aataaatata tttttaacat acattttgat 1381 tattttcaac gataacttac taaaacttaa aagttttatc ttaactttct taaattaaat 1441 aaaatatatt tataaattca atctatatca aaaacaatat tttttattaa caattactat 1501 tcaggttaaa aaaatggaaa aaattattga aaaaagtata tatgcctctc gttggttaat 1561 gtttcctgta tatgtaggtt tatcgtttgg ttttatttta ttaacattga aatttttcca 1621 acaaattgta tttatcatgc cagatattgt ggctatgtca gaatcaggtt tagtgttagt 1681 tgttttgtca ttaattgata ttgcattagt aggtggtcta ttagttatgg ttatgttttc 1741 tggatatgaa aattttattt ctaaaatgga tatacaagat aatcagaaaa gattagggtg 1801 gatgggaaca atggatgtta attcaataaa aaacaaagta gcatcttcaa tagttgctat 1861 atcttctgtt catcttttac gtctttttat ggaagcagaa aaaatattag atgataaaat 1921 tatgttatgt gttattattc atttaacttt tgtattatcg gcttttggaa tggcatatat 1981 tgataaaatg agcaaaaaaa aacatatcct tcattagttt ttgtttaaaa aaaatttatt 2041 tttttttaaa aaaactaata taaaagtata ttgttcaata tatgatttat caaaaactct 2101 tcttttaaaa aaatatttta cttttaatta agtgtattta gtgcctagaa aaaattatat 2161 atataatcta aaaccatttt ttaatccatc taaaaatgaa agaaaaaaat ctacatttat 2221 ttgttatgca atgaaaaaag tatcagaaat agacgttgct agaagtcatt taaatcgtgc 2281 attattacca atagatccta aaactggtaa tgttttgcct cgattcagac gattaaataa 2341 acatcgagca tgtgctatga gagctatagt acctgctatg ttgtattatt ttaatattaa 2401 ttctaaatta gtcgaagctt ctattgaaaa attagcagat gaatgtggat tatctacttt 2461 atcagattct ggtaataaat ccatcactcg cgcttctcgt ttaataagtg agtttttgga 2521 accaatgggt tttgttaaat gtaaaaaaat aaatagtaaa tcaatgagta attatatacc 2581 taaaaaaatt tttttaactc ccatgttttt tatgttatgt ggtatttcac catcagaaat 2641 aaatcatttt ttatcaaaaa aaataaaacc attaaaaaaa ttaaaaaaac aagaaaaaag 2701 tgcatttatt tcttttacag atatgaagat tatatcgcaa ttagatgaaa gatcagctag 2761 aacaaaaatt ttaaatgctt taattaatta ttacacggct agtgaattaa caaaaatagg 2821 tccgaagggt ttaaaaaaaa agatagatat tgaatatagt aatttatgta atttatataa 2881 aaaaaaatca taaaataaat ttatacaata aaaatttcat aagacatcat atacaaaatt 2941 attttgtata tgatgtctta tgaaattttt attgtataaa tttattttta tccaataaaa 3001 cattccatta ccttaatttg gaaaaatttt tatgaaatct aaagttgtta tttttgatac 3061 cacgctacgc gatggagaac aagcattaca agcaagtctt agtgttaaag aaaagttaca 3121 aattgcacta tctttagaaa aatgtgggat agacatttta gaaataggat ttcctgtttc 3181 atcacccgga gattttaaat cagttcaaac tatatctaaa aatattaaaa atagtcgaat 3241 atgtagttta gctcgttgta tagaaaaaga catcgatgca gccggagaag ctatgtcttc 3301 atctgattct tttcgaattc atattttttt agctacttca acacttcata tggaatctaa 3361 attaaagaaa aattttaacg aaataataga tatggctgtt ttttcagtaa aaaaagcttt 3421 acgttatact gatgatattg aattttcttg tgaagatgct actagaacta caatggataa 3481 tttatgtcgt attgtagaaa cattaattaa atcaggtgtg aaaacaatta atatccccga 3541 tacagtagga tatactgtac ccaacgaatt atcttgtata ataaaaaatt tgtttgaaag 3601 agtacctaac attcataaat ctataatttc agttcattgt catgacgatt taggcatggc 3661 tgtgggaaat tcaatatcag ctatacaggc aggtgctaga caaatagaag ggactataaa 3721 cggaattggc gaaagagctg gtaatacagc attagaagaa ataattatgg ctataaaagt 3781 aagagaagat atcttaagtg tttccactaa tattaattat aaagaaattt atcgaactag 3841 taaaattgtt agtcagattt gtaatatgcc aattccatct aataaagcta tagtaggtag 3901 taatgcgttt gcacattctt caggtatcca ccaagatggt gtattaaaaa atagaaaaaa 3961 ttatgaaatt atggaaccaa gtagtattgg tttaaaagaa gtaaaactta acttaacctc 4021 tcgttctgga agagcagcag taaaacatta tatggatgaa atgggttata ataatagtga 4081 ttataatata gatgaacttt atactgcttt tttaaagtta gcagataaaa aaggtcaggt 4141 ttttgactat gatttagaag cattagcttt tattaataaa caacaagatg aatgggaata 4201 cttttctttg aaatttttca gtgtgcagtc tatttctaat agtttatcta ctgcatcagt 4261 aaaattatta tgtggcaaaa aaacatacac agaatcttct actacaagca atggaccagt 4321 tgatgctatt taccaagcat taaatagaat tgcatgtttt cctattatat tacaaaaatt 4381 tcaacttgta gctaagggga agggtaaaga tgcgttaggt caagtagata tcttagttga 4441 acataaaaaa aggaagtttc atggagtggg tttggctact gatattattg aagcatcagc 4501 tcaagcaatg atcaatgtac taaataacat atggaaagca aaacaagtta acaaaaaatt 4561 aaaaatttta aaagatttta aaaaaaaata atacatctag atatagaaat ataatatttt 4621 ttgttgattt ttattaaaga gaaaaatttt tatgaaaaaa aattatcgta tcgctgtatt 4681 atctggtgat ggaataggtc ctgaagtcat gcaagaagca tgtaaaattt taaatgtttt 4741 aaaaaaatat ttttttctat ctttagaaat acaaaaattt aatattggtg gtatagctat 4801 tgaacgtgaa ggtgttgctt tgccaaaaac tacattgcta ggatgtgaaa attctgattc 4861 aattttatta ggttctgtag gtggtaagaa gtgggataac cttccagtag aacaacgtcc 4921 tgaaagagcc gctttattgc ctttaagaaa acactttaat cttttttcta atttaagacc 4981 agcaaaatta tatccagaac taaaatgttt atcacctctt cgttcagata ttgtaaaaaa 5041 tggttttgat atattatgtg taagagaatt aacaggtgga atttattttg gtgaacctaa 5101 aggttttgta aataaaaaca atactaaata tgcttttgat acagaaattt atcatgagta 5161 tgaaattatc cgtattgctc atttagcttt taaattggca cgatctagga agaagaaagt 5221 ttgttctata gataaatcaa atgttcttca aagttctatt ttatggagag aagtagttga 5281 aagtgtttct aaaaaatacc cagatgttca tttatctcat ttatatattg ataatgctgc 5341 tatgcaaata attaaagatc ctaatcagtt tgatgtatta ttatgctcaa atctttttgg 5401 agatattatt tctgatgaat gtgctacaat tacaggttca attgggatgt taccatcagc 5461 aagttttaat gaaaaaaatt ttggattata tgagccggca ggcggatcag cacctgatat 5521 tgaaggtaaa aatattgcta atccgattgc tcaaatactt tcactttcta tgttagttag 5581 atatggcatg aatttaaatc agatagcaga taaaattgat aaagctgtta ataatgtatt 5641 aaaaaaaggt tatagaactt cagatatatc tcatgataat aattttttaa aaacagatga 5701 aatgggtgat cttattgttg attctttaat taatggtgaa tgacatgaag aaaacattat 5761 acgataaaat atatgattca catattgttt atgaagagaa aaataataca tctcttttat 5821 atatagattt acatttactt catgaggtta catcacctca agcctttgat tcattacgag 5881 ataaaaatcg aaaggttaga cagcctaaaa aaacttttgc tacaatggat cataatgttt 5941 cgacaactag tcaagatatt aatgcttcag gttctatggc aaaggtacaa atgcaagaat 6001 taattaaaaa ttgttccgag tttaatatat cattatatga tataaaaaat cctaatcaag 6061 ggattgttca tgttattagt cctgagaaag ggatgacttt gccgggtatg actattgtat 6121 gtggtgactc acatacatcg acgcatggtg catttggagc attatctttt ggtattggta 6181 cttcagaagt tgaacatgtt cttgcaactc aaacattaaa acaacagcgt tttaaaaata 6241 tgaaaataga aattacagga gaaattcaaa aatttgtcac tgctaaagat ttgattttgt 6301 ttattattgg aaaattagga tcatctggag gtgcaggata tataattgaa ttttgtggta 6361 atgtaattga aaaaatgagc atggaagaaa gaatgacaat ttgtaatatg gcaattgaaa 6421 taggtgcaaa gtcaggtttg atagcaccag atgaagtgac attttcttat ctgaaaaata 6481 aaatgtatgc accacgtggt gttttttgga aaaaagcatt aaatttttgg aagaatttga 6541 aatctgataa aaatgctttt tttgataaag ttgtgaatat aaatatttct gatctctcgc 6601 cacaaattac ctgggggaca aatcctgatc aggtgatctc aatcgatcaa aaaatacctg 6661 attttagtag ttttgataat ttaataaaga aagatttagc gaaatctgca tgtaaatata 6721 tgggtttaaa aataggtact tatttaacta atattactgt tgataaagtt tttattggat 6781 cttgtactaa tggaagaata gaagatttaa gagctgcctc aaagatactt aaagataaaa 6841 aaattgctaa taatgttaaa gctattgttg ttcctggatc aggttcagtt aagagagaag 6901 ctgaaaatga aggtttagat aaaatattta ttagtgcagg attcgaatgg cgtttacctg 6961 gttgttctat gtgtttaggt atgaataaag atagattaaa tgatggtgaa cgttgtgcgt 7021 ctactagcaa tcgaaatttt gagggtcgcc aggggagagg ggggcgaaca catttagtaa 7081 gtcctattat ggcggctgca gctgctgtat acggtaaatt tgttgatgtt agaaaattat 7141 ataatggtga gaataattaa atatgtttaa atttactgga catgctggta tcgttgttcc 7201 tttagatata tctaatatag atacagatat tattattccg aagcaatttt tgaaaagagt 7261 aaacaaaatt ggatttggta aatatttatt tcatgactgg cgttttattg atgcaaatca 7321 attagtaaaa aatgaggatt ttatactcaa taaaaaaatt tataaaaacg caagtatttt 7381 attaactaga gagaattttg gttgtggctc atcgagagaa catgctgttt ggtctctagt 7441 agactatgga ttcaaagtaa taattgcacc tagttttgct gatatttttt ataataatag 7501 ttttaacaat aagcttcttt taatcacttt aagttcgagt gaaattactt ttttatttga 7561 tattgtaaaa aataatatag gtattacttt tgatgtaagt ttagtcgaaa aaacggttac 7621 tgtaaataag gaagtatttt catttgaatt agatgatttt cattactttt gtttgttaaa 7681 tgatttagat aatattgatt tgactatgaa gcatttatca gaaataaaat cttatgaaag 7741 tcgtatatct gattttttat tagaaagaag agatttcaaa tcttaa //