LOCUS NC_000957 5228 bp DNA linear BCT 30-MAR-2006 DEFINITION Borrelia burgdorferi B31 plasmid lp5, complete sequence. ACCESSION NC_000957 VERSION NC_000957.1 GI:11497445 DBLINK Project:3 KEYWORDS . SOURCE Borrelia burgdorferi B31 ORGANISM Borrelia burgdorferi B31 Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Borrelia; Borrelia burgdorferi group. REFERENCE 1 (bases 1 to 5228) AUTHORS Fraser,C.M., Casjens,S., Huang,W.M., Sutton,G.G., Lathigra,R., White,O., Dodson,R., Hickey,E.K., Gwinn,M., Peterson,J., van-Vugt,R., Palmer,N., Haft,D., Rosa,P. and Stevenson,B. TITLE A bacterial genome in flux: the twelve linear and nine circular extrachromosomal DNAs in an infectious isolate of the Lyme disease spirochete Borrelia burgdorferi JOURNAL Mol. Microbiol. 35 (3), 490-516 (2000) PUBMED 10672174 REFERENCE 2 (bases 1 to 5228) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (01-DEC-2000) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 5228) AUTHORS Fraser,C.M., Casjens,S., Huang,W.M., Sutton,G.G., Lathigra,R., White,O., Dodson,R., Hickey,E.K., Gwinn,M., Peterson,J., van-Vugt,R., Palmer,N., Haft,D., Rosa,P. and Stevenson,B. TITLE Direct Submission JOURNAL Submitted (11-NOV-1999) The Institute for Genomic Research, 9712 Medical Center Dr, Rockville, MD 20850, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AE001583. COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..5228 /organism="Borrelia burgdorferi B31" /mol_type="genomic DNA" /strain="B31" /db_xref="taxon:224326" /plasmid="lp5" gene 195..638 /locus_tag="BB_T01" /db_xref="GeneID:1194835" CDS 195..638 /locus_tag="BB_T01" /note="hypothetical protein; identified by Glimmer2; putative" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_051538.1" /db_xref="GI:11497450" /db_xref="GeneID:1194835" /translation="MGNYQYFFNLFFIFKIIFIYLYIMYKAIKEQQEIEIDHACRILI LTATIFEINSIFENYYQKTLLKKYNENLKNKNLPPSNISTMKKYLNQLEKEIKIIAKF YFKNDQSLIYCKLNYTLEKICLKLIKFYKKFYKELKQFTQKNITT" gene 744..1097 /locus_tag="BB_T02" /db_xref="GeneID:1194831" CDS 744..1097 /locus_tag="BB_T02" /note="similar to GP:1142590 percent identity: 94.44; identified by sequence similarity; putative" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_051539.1" /db_xref="GI:11497446" /db_xref="GeneID:1194831" /translation="MEKSLKEILGMNSKNKLSSHLIILIYTLNNINLNLNIEYYNRGF IRRAFTFNVDRYCNTSKDIEIDIDLLIKYLDILENNLKIIANKYKVEKNIFKLYYIIN YPLKICYTKIRNYYK" gene 1208..1576 /locus_tag="BB_T03" /db_xref="GeneID:1194836" CDS 1208..1576 /locus_tag="BB_T03" /note="hypothetical protein; identified by Glimmer2; putative" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_051540.1" /db_xref="GI:11497451" /db_xref="GeneID:1194836" /translation="MNGIINDTLVARITKQIKFAKNKLIILVKTLDHMNQELFYSENK DYTHLLIKSKFNLALAKTTQHEVNYKTLLEYLEILEKNPKVIVKCPTNKENESFIGRY TLLYPLEVCCTKIYNLHPNI" gene 2148..3254 /locus_tag="BB_T04" /db_xref="GeneID:1194832" CDS 2148..3254 /locus_tag="BB_T04" /note="similar to PID:1174341 PID:1174349 GB:AE001584 percent identity: 82.63; identified by sequence similarity; putative" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_051541.1" /db_xref="GI:11497447" /db_xref="GeneID:1194832" /translation="MNSKTTNKTNRNCYNKVQHKLIVLISTICYLNKTHKKYTQKTIL YYFNENLRKNGQTISTLRTMQKYIYRLQKEIKVTTNYYQHMGVNSGTEIYYKLNYPKK DCYHKINQHFKEKKEERYQNRVANYFNKNSDSKMGSVQLGECNNNNNNIKEERKINEI EKYQVIKYFNKCDFSCKEILPVLLTLNIDKENIIKIIKILKITEINSKNKNIRPTKSC IKKKQEKLKGILCNTQKELEENGYNPKQLEINFQKIYENYKYKPHFIIENHKYSDLNN IKRKLEKSIERKKENSQQDYENLKINVFNILIEQLKKETNIEILKPIIKEYLNNQKKI KYNKIFGIYYLELLEIIKNRKHDLNLEKFSKKVV" gene 3340..4332 /locus_tag="BB_T06" /db_xref="GeneID:1194833" CDS 3340..4332 /locus_tag="BB_T06" /note="similar to SP:P39153 PID:556881 GB:AL009126 percent identity: 57.36; identified by sequence similarity; putative" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_051542.1" /db_xref="GI:11497448" /db_xref="GeneID:1194833" /translation="MIKTPIISEDQFKIALKLIKMGEIIVFPTDTVYAIGANIYDEYA VRMINLVKKKSINEPLMLYVDTIEKIKELSSHVPKSAKILMEKFSPGPLTYVLKKSIK IPKFINNNLDTVAIRIPKNKTALNLIRKLKNPLVVSSANLSKRPSSTSFSMALKELNG LVGGIIMPKKNKDSNIGIESTIIEFDSKDNVIILRPGAITKKMIEKVLGSRYKVNYAK ETKIDLKKMFSYRLRIPVHTFKRGDNIRKYLKTNTKVLITRDTFKFYFFSFLWDKKNI ILFDSLIEYAENLYKELVNAEEKYDQVIVEIVENEELGYAINNRIVKASSNNFM" gene 4388..4819 /locus_tag="BB_T07" /db_xref="GeneID:1194834" CDS 4388..4819 /locus_tag="BB_T07" /note="similar to GB:L31615 GB:L31418 PID:520783 PID:551742 percent identity: 61.90; identified by sequence similarity; putative" /codon_start=1 /transl_table=11 /product="outer membrane protein" /protein_id="NP_051543.1" /db_xref="GI:11497449" /db_xref="GeneID:1194834" /translation="MENIFEYLKLNAVEICVLKDIKKVIYKFYESILDIENDAETINI LSPXKSQNILNEFFFNLGPKKSKELINLFRKIKVKLGDNVFENKVFIFYLCLDDVDFF KLLYVLDKSNFDDYLILIYEKFLAIRKDLKLILNNYGSNNL" ORIGIN 1 ggagtatttt gactcaaaac tttacccttt aaattactaa atttaacttg aaaatactaa 61 actttaaccc aaaataataa aactttaact tgaatttttc aaaattacaa aactttaacc 121 caaaatgata aaactttaat tttttgtaat ttttacataa aagtgttaac tttaaaatcc 181 caaactttat aattttggga aattatcaat acttttttaa tttattcttt attttcaaaa 241 taatctttat atacttatat attatgtata aggctataaa agaacaacaa gaaatagaaa 301 tagatcatgc atgcagaata cttattctta ccgcaacaat atttgaaata aattcaatat 361 tcgaaaatta ttatcaaaaa actctactca aaaagtataa cgaaaatctc aaaaacaaaa 421 atctacctcc tagtaatata tcaacaatga aaaaatactt aaatcaatta gaaaaagaaa 481 taaaaatcat agcaaaattc tattttaaaa acgatcaatc tctaatttat tgcaaactta 541 attataccct agaaaaaatt tgtttaaaac taataaaatt ctacaaaaaa ttctacaaag 601 aattaaaaca atttacacaa aagaacatta ctacttaatt gtaaatacat tataaaataa 661 tcttatgcaa atatttagaa atacaaattg taaagatata tatttttatt taaataaata 721 ataaaaattg ctggcacact aatttggaaa aatctttaaa agaaatacta ggtatgaata 781 gcaaaaataa gctatcttca cacttaataa ttcttattta cacactaaac aatattaatc 841 taaatttaaa tattgagtac tataataggg ggtttatacg ccgtgcgttt acttttaacg 901 tagatagata ttgcaatact agtaaagata ttgaaataga catagactta ctaataaagt 961 atctagatat tttagaaaac aatctaaaaa tcatagctaa taaatataaa gtagaaaaaa 1021 atatattcaa actttactac ataatcaatt atcctttaaa aatatgttac acaaaaatta 1081 ggaactacta taaatagact atataatggt ttaacgccaa aaaatactgc actatattta 1141 caatataatg gtttaacgcc aaaaaatact gcactatatt tacaatataa tagggggcta 1201 attcattatg aatggaataa ttaacgatac actggtcgca agaataacaa agcaaattaa 1261 atttgctaag aataagttaa tcattcttgt caaaacacta gatcacatga atcaagaatt 1321 gttctatagt gaaaacaaag attatactca tttattaata aaaagcaagt ttaatcttgc 1381 tctagctaaa acgactcaac acgaagttaa ttataaaacc ctattagaat atcttgaaat 1441 attagaaaaa aatccaaaag taatcgtaaa atgtcccaca aataaagaaa atgaaagctt 1501 tataggccgt tatacactcc tttacccttt agaagtttgt tgcactaaaa tttataatct 1561 tcatcctaat atttaagcta atataatcca gaaaatttac tataatcgat tatataaata 1621 gtaaaccaat atctatccta gtatattatg gcctataata ggcccaataa agaatatttt 1681 gatctataaa tgatcaatcc ataaaggact atatgtcttt tatggatttt gaacataaat 1741 aattacttaa ttaccaatat aaagctaaat acaaaataaa tccaatatat ctttaaattc 1801 tagaaaattt ttaatctaaa aaaatcatta ttatagtgcc caaaacaaaa taaaacttaa 1861 actgggaaaa ttagtgttac ataaaatgaa tagggcttaa gacaaattct ttataaaaaa 1921 cttgctttaa gccctatttc acgatcactt ctttgtaatt cgaactctcg tcgaactatt 1981 tatagtataa caaaaattaa accatagtca agttgtattt taaataaatt ttaatctcaa 2041 ttactaaaac tttacaatat aactaaaatt gctataagag tatttacttt tatagcaatt 2101 ttagttatat tgtaaaatga tcaccataat tgtaaggaga agtctctatg aattcaaaaa 2161 caacaaataa aaccaataga aattgctata ataaagttca acacaaatta atagttctta 2221 tttcaacaat atgctatcta aacaaaacac ataagaaata tacacaaaaa accatactct 2281 attactttaa tgaaaatcta agaaaaaacg gtcaaactat ttctacacta agaactatgc 2341 aaaagtatat ctatagacta caaaaagaaa taaaagtcac aacaaactac tatcaacata 2401 tgggggtaaa ttcgggtacg gaaatttatt acaagcttaa ttatcctaaa aaagattgtt 2461 atcataaaat aaaccagcac tttaaagaaa aaaaagaaga aagataccaa aatagagttg 2521 ccaactattt caacaaaaat tctgattcaa aaatgggtag tgtgcaattg ggggagtgta 2581 ataataataa taataatata aaagaagaaa gaaaaattaa cgaaatagaa aagtatcaag 2641 taataaaata cttcaacaag tgtgactttt catgtaaaga aattcttcca gttttattaa 2701 cattaaatat tgataaagaa aacataatta aaataataaa aatcctaaaa ataaccgaaa 2761 ttaactcaaa aaataaaaat atacgcccta ctaaatcttg tattaaaaaa aaacaagaaa 2821 aattaaaggg aattctatgt aacactcaaa aagaattaga agaaaacggg tacaatccca 2881 aacaattaga aataaatttt caaaaaatat acgaaaatta caaatataaa ccccatttta 2941 ttattgaaaa tcataaatat agcgatttaa acaacataaa acgtaaattg gaaaagtcaa 3001 ttgaaagaaa aaaagaaaat tctcaacaag attatgaaaa tttaaagata aacgttttca 3061 atatccttat tgaacaacta aaaaaagaaa caaatattga aattctaaag cctattataa 3121 aagaatattt gaataaccaa aaaaaaataa aatacaacaa aatatttggc atatattatc 3181 ttgaattact agaaataata aaaaatagaa aacatgatct aaatttagaa aaatttagta 3241 aaaaagttgt ttaggtgcta aaatatgaaa agtttattta gattagtgca gaaaattgag 3301 ttcaaaaata cgaattattc catagaggct aaagaataaa tgataaaaac accaataatt 3361 agtgaagatc aatttaaaat agctttaaaa ttaatcaaaa tgggtgaaat tattgtattt 3421 ccaacagata cggtttacgc tataggggcc aatatttatg atgaatatgc agtgagaatg 3481 ataaatttag taaaaaaaaa atccattaat gagcccttaa tgctttatgt tgatacaata 3541 gagaaaataa aagaattatc cagccatgtt cctaaaagtg ctaagatttt aatggaaaag 3601 tttagtccgg gccctttaac ttatgttctt aaaaaatcaa taaaaatacc taaattcatt 3661 aataataact tagatacagt ggcaataaga atacccaaaa ataaaaccgc attaaattta 3721 attagaaaat tgaaaaaccc tcttgtagta tcatcagcaa atttatccaa aaggcctagt 3781 tcaacaagtt ttagcatggc tttaaaagaa ttaaatgggc ttgtaggagg gataataatg 3841 ccaaaaaaaa ataaagactc taatattggc atagagtcaa ctattattga atttgactcg 3901 aaagataatg taataatatt aaggcccggt gcaataacaa aaaaaatgat agaaaaagtg 3961 ctaggcagta gatataaagt aaattatgca aaggaaacaa aaatagactt aaaaaaaatg 4021 ttttcttata ggctaagaat acctgtccat acatttaaac gcggggataa cataagaaaa 4081 tatttaaaaa cgaatacaaa agtacttatc acaagagaca cttttaaatt ttattttttt 4141 agttttttat gggataaaaa aaatattata ttattcgatt ctttaataga atatgcagaa 4201 aatctttata aagagctagt aaatgccgaa gaaaaatatg atcaagttat tgttgaaata 4261 gtagaaaatg aagaactagg gtatgctata aataatagaa ttgtaaaggc tagctcaaat 4321 aatttcatgt aaattcatta ataaattttt actattctaa taaattgtta tatgtttccc 4381 atatataatg gaaaacatat tcgagtactt aaaattaaat gccgtcgaaa tttgtgtttt 4441 aaaagatata aaaaaagtta tttataagtt ctatgagtcg attttagata tagaaaatga 4501 tgcggagaca ataaatatat tgtctccgcm taaaagtcaa aacattttaa atgaattttt 4561 ttttaatttg gggccaaaaa agtctaaaga attaatcaac ctttttcgta aaattaaagt 4621 aaagctgggt gataatgtgt ttgaaaataa ggttttcata ttctatttat gtcttgatga 4681 tgtagatttt tttaaacttt tgtatgtgct tgataaaagc aattttgatg attatctaat 4741 attgatttat gaaaaatttc ttgctataag aaaagatttg aaattaatat tgaacaatta 4801 tggttcgaat aacttgtaat ttaaagtaaa tgtattagcc cctttttggg gctaataaca 4861 tattctgtat ttgtaattta ggattgttgc aataatatta tctattattg taatatacaa 4921 gattcacgtt ttgtatgttg cagtaaaggg gcagtttttg tatagattct tgtgtagaaa 4981 aattttcatt aatttttggt tgctcttcta ctactctaga agagttttcc tcctttttat 5041 tgaatttatg actttatttt tgcacttatg atataaagaa ctgtcctttg tatatgattt 5101 agaatacaat atagcattat gccttttaat ttaaagagcg ttatttgttc ctaaaaaaga 5161 aaagaatttc aagtgcagct agtaaaatag gagccaataa tggctctaca gctttatact 5221 aaaaaaaa //