Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
---|---|
Accession | NC_000909 |
Length | 1,664,970 |
Click here to switch to the map view.
The map label for this gene is 15668810
Identifier: 15668810
GI number: 15668810
Start: 556207
End: 556851
Strand: Direct
Name: 15668810
Synonym: MJ0629
Alternate gene names: NA
Gene position: 556207-556851 (Clockwise)
Preceding gene: 15668809
Following gene: 15668811
Centisome position: 33.41
GC content: 26.67
Gene sequence:
>645_bases ATGGATGTGATTACTATGTCTATTTTTTTATTTGAGAGGGATAATGAGAAAAGTGTAATAGATAATCTTAGATTATTAAT TCAGATGTCTCTTAAAAGCATTGAGCTATTAAAAGATTATATGAATTCCAAAGATGAAAAAATATTAAAAGAGATTATAA AAATAGAAGAGGAAGGAGATGAAACTACAAAAAATATAAGGATAAACTTAGAAAAGGCATTTTTACCAAATATGAGAAGA GAGTTATCAAGGTCTGCAGAGCTTTTAGATGAGACATTAGACAGCTTAAAACATGCCGCTATGTTATATGAGTTATTAAA GGAAGAGTTTGATGAGTATTTAAAAAATGAAATAGACCTTGTTTTAATGATTACCGTGGATATGTTTCAACACTTAGATA GAGTTTTAGATGTTATTGAAAAAGGTGGGGATTTAGACCCAATTATCAAAGAGATTAAAGACAAAGAAAAATTTATTGAT GATGTTTATCAAAATAGGATTTATAAGTATTTAATAAATTTGGAAGTTGAATCATTTTGGGAGGGAAAAATTTTGTGTGA TTTTATAGATAATATTGTTAATATTAGCGACTACATAGAAGATGTGGCTGATGAGTTACATATAATTTATTTACACACAA AATAA
Upstream 100 bases:
>100_bases TCTAAAAATAAATACAAAATTATTGTAAATTCAAAATCAGATGTTGAAAATATTTTAAAAGATAGAAGTAAAATAGATAA AATACTAAGAAAAATCTAAA
Downstream 100 bases:
>100_bases AATGAGTTTTAGATAAATGGGTGATTACTATAGAGATTTCTATAAATTTAGAGCTAATCATAAGTTTTTATTTATTGTTT ATATTAGGGGCTAATAATGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MDVITMSIFLFERDNEKSVIDNLRLLIQMSLKSIELLKDYMNSKDEKILKEIIKIEEEGDETTKNIRINLEKAFLPNMRR ELSRSAELLDETLDSLKHAAMLYELLKEEFDEYLKNEIDLVLMITVDMFQHLDRVLDVIEKGGDLDPIIKEIKDKEKFID DVYQNRIYKYLINLEVESFWEGKILCDFIDNIVNISDYIEDVADELHIIYLHTK
Sequences:
>Translated_214_residues MDVITMSIFLFERDNEKSVIDNLRLLIQMSLKSIELLKDYMNSKDEKILKEIIKIEEEGDETTKNIRINLEKAFLPNMRR ELSRSAELLDETLDSLKHAAMLYELLKEEFDEYLKNEIDLVLMITVDMFQHLDRVLDVIEKGGDLDPIIKEIKDKEKFID DVYQNRIYKYLINLEVESFWEGKILCDFIDNIVNISDYIEDVADELHIIYLHTK >Mature_214_residues MDVITMSIFLFERDNEKSVIDNLRLLIQMSLKSIELLKDYMNSKDEKILKEIIKIEEEGDETTKNIRINLEKAFLPNMRR ELSRSAELLDETLDSLKHAAMLYELLKEEFDEYLKNEIDLVLMITVDMFQHLDRVLDVIEKGGDLDPIIKEIKDKEKFID DVYQNRIYKYLINLEVESFWEGKILCDFIDNIVNISDYIEDVADELHIIYLHTK
Specific function: Unknown
COG id: COG1392
COG function: function code P; Phosphate transport regulator (distant homolog of PhoU)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0111 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y629_METJA (Q58046)
Other databases:
- EMBL: L77117 - PIR: E64378 - RefSeq: NP_247613.1 - ProteinModelPortal: Q58046 - GeneID: 1451495 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0629 - NMPDR: fig|243232.1.peg.650 - TIGR: MJ0629 - HOGENOM: HBG541060 - OMA: PNMRREL - ProtClustDB: CLSK782754 - BioCyc: MJAN243232:MJ_0629-MONOMER - InterPro: IPR002727 - InterPro: IPR018445 - TIGRFAMs: TIGR00153
Pfam domain/function: PF01865 PhoU_div
EC number: NA
Molecular weight: Translated: 25429; Mature: 25429
Theoretical pI: Translated: 4.29; Mature: 4.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVITMSIFLFERDNEKSVIDNLRLLIQMSLKSIELLKDYMNSKDEKILKEIIKIEEEGD CCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC ETTKNIRINLEKAFLPNMRRELSRSAELLDETLDSLKHAAMLYELLKEEFDEYLKNEIDL CHHHHEEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE VLMITVDMFQHLDRVLDVIEKGGDLDPIIKEIKDKEKFIDDVYQNRIYKYLINLEVESFW EEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EGKILCDFIDNIVNISDYIEDVADELHIIYLHTK CCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEECC >Mature Secondary Structure MDVITMSIFLFERDNEKSVIDNLRLLIQMSLKSIELLKDYMNSKDEKILKEIIKIEEEGD CCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC ETTKNIRINLEKAFLPNMRRELSRSAELLDETLDSLKHAAMLYELLKEEFDEYLKNEIDL CHHHHEEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE VLMITVDMFQHLDRVLDVIEKGGDLDPIIKEIKDKEKFIDDVYQNRIYKYLINLEVESFW EEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EGKILCDFIDNIVNISDYIEDVADELHIIYLHTK CCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087