Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
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Accession | NC_000909 |
Length | 1,664,970 |
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The map label for this gene is 15668805
Identifier: 15668805
GI number: 15668805
Start: 553379
End: 553555
Strand: Direct
Name: 15668805
Synonym: MJ0624
Alternate gene names: NA
Gene position: 553379-553555 (Clockwise)
Preceding gene: 15668804
Following gene: 15668806
Centisome position: 33.24
GC content: 33.9
Gene sequence:
>177_bases ATGGGGATAAAGATATTAGAGAAATGTGTTGGTTGTGGGAACTGTGTTGTATTTTGCCCAAGAAGAGCAATAAAAACCTA TGGAGTTGCTATAGTTGATGAAAATAAATGCTCAAATTGTGGGATTTGTGCAAGGTATTGTCCTATAAATGCCATAAAAG TAGATACCTCATTATAA
Upstream 100 bases:
>100_bases CAGTCCCAAGATGTCCTCTAAAATCTATTATGAAGTTAAGTGTTGAGGATAAGTTGGAGGCTAAATTAATCCCAATAGAA GAATAATATTTGGTGCTACA
Downstream 100 bases:
>100_bases GAGCTAAACAGATTTTAAACAAACATTATATATCTTTTTTGGTGATATTATGAAATTCTATAATAGAGAGAAAGAGCTGA ATTATTTAAAAACCTATTGT
Product: ferredoxin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 58; Mature: 57
Protein sequence:
>58_residues MGIKILEKCVGCGNCVVFCPRRAIKTYGVAIVDENKCSNCGICARYCPINAIKVDTSL
Sequences:
>Translated_58_residues MGIKILEKCVGCGNCVVFCPRRAIKTYGVAIVDENKCSNCGICARYCPINAIKVDTSL >Mature_57_residues GIKILEKCVGCGNCVVFCPRRAIKTYGVAIVDENKCSNCGICARYCPINAIKVDTSL
Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons probably in the CO-dehydrogenase complex
COG id: COG1145
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 4Fe-4S ferredoxin-type domains
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): FER6_METJA (Q58041)
Other databases:
- EMBL: L77117 - PIR: H64377 - RefSeq: NP_247608.1 - ProteinModelPortal: Q58041 - SMR: Q58041 - GeneID: 1451490 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0624 - NMPDR: fig|243232.1.peg.645 - TIGR: MJ0624 - HOGENOM: HBG734156 - OMA: MEILDKC - ProtClustDB: CLSK2517635 - BioCyc: MJAN243232:MJ_0624-MONOMER - GO: GO:0006810 - InterPro: IPR001450 - InterPro: IPR017896 - InterPro: IPR017900
Pfam domain/function: PF00037 Fer4
EC number: NA
Molecular weight: Translated: 6256; Mature: 6124
Theoretical pI: Translated: 8.40; Mature: 8.40
Prosite motif: PS00198 4FE4S_FER_1; PS51379 4FE4S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
13.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 15.5 %Cys+Met (Translated Protein) 14.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 14.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIKILEKCVGCGNCVVFCPRRAIKTYGVAIVDENKCSNCGICARYCPINAIKVDTSL CCHHHHHHHCCCCCEEEECCCCHHHHCCEEEEECCCCCCCCEEEECCCCCEEEEECCC >Mature Secondary Structure GIKILEKCVGCGNCVVFCPRRAIKTYGVAIVDENKCSNCGICARYCPINAIKVDTSL CHHHHHHHCCCCCEEEECCCCHHHHCCEEEEECCCCCCCCEEEECCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087