Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

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The map label for this gene is 15668805

Identifier: 15668805

GI number: 15668805

Start: 553379

End: 553555

Strand: Direct

Name: 15668805

Synonym: MJ0624

Alternate gene names: NA

Gene position: 553379-553555 (Clockwise)

Preceding gene: 15668804

Following gene: 15668806

Centisome position: 33.24

GC content: 33.9

Gene sequence:

>177_bases
ATGGGGATAAAGATATTAGAGAAATGTGTTGGTTGTGGGAACTGTGTTGTATTTTGCCCAAGAAGAGCAATAAAAACCTA
TGGAGTTGCTATAGTTGATGAAAATAAATGCTCAAATTGTGGGATTTGTGCAAGGTATTGTCCTATAAATGCCATAAAAG
TAGATACCTCATTATAA

Upstream 100 bases:

>100_bases
CAGTCCCAAGATGTCCTCTAAAATCTATTATGAAGTTAAGTGTTGAGGATAAGTTGGAGGCTAAATTAATCCCAATAGAA
GAATAATATTTGGTGCTACA

Downstream 100 bases:

>100_bases
GAGCTAAACAGATTTTAAACAAACATTATATATCTTTTTTGGTGATATTATGAAATTCTATAATAGAGAGAAAGAGCTGA
ATTATTTAAAAACCTATTGT

Product: ferredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 58; Mature: 57

Protein sequence:

>58_residues
MGIKILEKCVGCGNCVVFCPRRAIKTYGVAIVDENKCSNCGICARYCPINAIKVDTSL

Sequences:

>Translated_58_residues
MGIKILEKCVGCGNCVVFCPRRAIKTYGVAIVDENKCSNCGICARYCPINAIKVDTSL
>Mature_57_residues
GIKILEKCVGCGNCVVFCPRRAIKTYGVAIVDENKCSNCGICARYCPINAIKVDTSL

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons probably in the CO-dehydrogenase complex

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): FER6_METJA (Q58041)

Other databases:

- EMBL:   L77117
- PIR:   H64377
- RefSeq:   NP_247608.1
- ProteinModelPortal:   Q58041
- SMR:   Q58041
- GeneID:   1451490
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0624
- NMPDR:   fig|243232.1.peg.645
- TIGR:   MJ0624
- HOGENOM:   HBG734156
- OMA:   MEILDKC
- ProtClustDB:   CLSK2517635
- BioCyc:   MJAN243232:MJ_0624-MONOMER
- GO:   GO:0006810
- InterPro:   IPR001450
- InterPro:   IPR017896
- InterPro:   IPR017900

Pfam domain/function: PF00037 Fer4

EC number: NA

Molecular weight: Translated: 6256; Mature: 6124

Theoretical pI: Translated: 8.40; Mature: 8.40

Prosite motif: PS00198 4FE4S_FER_1; PS51379 4FE4S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

13.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
15.5 %Cys+Met (Translated Protein)
14.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
14.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIKILEKCVGCGNCVVFCPRRAIKTYGVAIVDENKCSNCGICARYCPINAIKVDTSL
CCHHHHHHHCCCCCEEEECCCCHHHHCCEEEEECCCCCCCCEEEECCCCCEEEEECCC
>Mature Secondary Structure 
GIKILEKCVGCGNCVVFCPRRAIKTYGVAIVDENKCSNCGICARYCPINAIKVDTSL
CHHHHHHHCCCCCEEEECCCCHHHHCCEEEEECCCCCCCCEEEECCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087