Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
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Accession | NC_000909 |
Length | 1,664,970 |
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The map label for this gene is 15668791
Identifier: 15668791
GI number: 15668791
Start: 541109
End: 541684
Strand: Direct
Name: 15668791
Synonym: MJ0611
Alternate gene names: NA
Gene position: 541109-541684 (Clockwise)
Preceding gene: 15668781
Following gene: 15668792
Centisome position: 32.5
GC content: 32.29
Gene sequence:
>576_bases ATGAGTATCTTTAGATTTTCACAAAGAGAGATAATTGACTTAACAATATCGGTATTGGCAATAGCGTTTATTTTCTCTTA TCCAAATTTTTCAATTCTTGTTTTTATTATTAGCTTAATAGCCGTTGGTAGTGGCTTTATATTCCATGAATTAATGCATA GAACTGTAGCAAGGAAGTATGGAGCGTGGAGTGAATTTAGAGCATGGTATGAAGGCTTAATATTAGGTTTTATATTAAAG CTTGTCTTTGGAGCTACATTCATAGCTCCCGGGGCAGTTTATATTTACAAAGATTATTTAACCCCAGAAGAGAATGGAAA AATAGCTTTAGCTGGACCTCTAACAAACGTTGCTTTGGCATTTGTGTTTTTTATATTAATGTTAATCTTTAAACCGGGTT CTTTATTATATTGGATAGGAATTTTTGGATTCCATATAAACCTATTCTTAGCTGGCTTTAATATGCTTCCAATACCTCCA TTTGATGGAGAAAAAGTTTTAAAATGGAATCCATTTATTTGGGCAATTGTTGGACTCCCTTTAATTGGATATATGCTATA TATGATGTTCTGGTGA
Upstream 100 bases:
>100_bases CATAACACACTTAGCTGGGCTTATAACTGGATTAATATTTGGAAAACTACTATATAGGAAAATGGATGTAAGATACTATT AAAAATCCAATGGTGAAAAA
Downstream 100 bases:
>100_bases AAATCTTGAGTATAAGAGAGATTTTTCAAATACTCTCTTTGATGTATTTGTTATTTTTATACATTGGATTCTTACTCATT TCAAAATTTGATATCTCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 191; Mature: 190
Protein sequence:
>191_residues MSIFRFSQREIIDLTISVLAIAFIFSYPNFSILVFIISLIAVGSGFIFHELMHRTVARKYGAWSEFRAWYEGLILGFILK LVFGATFIAPGAVYIYKDYLTPEENGKIALAGPLTNVALAFVFFILMLIFKPGSLLYWIGIFGFHINLFLAGFNMLPIPP FDGEKVLKWNPFIWAIVGLPLIGYMLYMMFW
Sequences:
>Translated_191_residues MSIFRFSQREIIDLTISVLAIAFIFSYPNFSILVFIISLIAVGSGFIFHELMHRTVARKYGAWSEFRAWYEGLILGFILK LVFGATFIAPGAVYIYKDYLTPEENGKIALAGPLTNVALAFVFFILMLIFKPGSLLYWIGIFGFHINLFLAGFNMLPIPP FDGEKVLKWNPFIWAIVGLPLIGYMLYMMFW >Mature_190_residues SIFRFSQREIIDLTISVLAIAFIFSYPNFSILVFIISLIAVGSGFIFHELMHRTVARKYGAWSEFRAWYEGLILGFILKL VFGATFIAPGAVYIYKDYLTPEENGKIALAGPLTNVALAFVFFILMLIFKPGSLLYWIGIFGFHINLFLAGFNMLPIPPF DGEKVLKWNPFIWAIVGLPLIGYMLYMMFW
Specific function: Unknown
COG id: COG1994
COG function: function code R; Zn-dependent proteases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M50B family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y611_METJA (Q58028)
Other databases:
- EMBL: L77117 - PIR: C64376 - RefSeq: NP_247594.1 - ProteinModelPortal: Q58028 - GeneID: 1451476 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0611 - NMPDR: fig|243232.1.peg.631 - TIGR: MJ0611 - HOGENOM: HBG733226 - OMA: SEFRAWY - ProtClustDB: CLSK876262 - BioCyc: MJAN243232:MJ_0611-MONOMER - GO: GO:0006508 - InterPro: IPR008915
Pfam domain/function: PF02163 Peptidase_M50
EC number: NA
Molecular weight: Translated: 21835; Mature: 21703
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: NA
Important sites: ACT_SITE 50-50
Signals:
None
Transmembrane regions:
HASH(0xd1d5964)-; HASH(0xce6bd98)-; HASH(0xb673fa0)-; HASH(0xce96ae4)-; HASH(0xc1c1054)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIFRFSQREIIDLTISVLAIAFIFSYPNFSILVFIISLIAVGSGFIFHELMHRTVARKY CCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH GAWSEFRAWYEGLILGFILKLVFGATFIAPGAVYIYKDYLTPEENGKIALAGPLTNVALA CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEECCHHHHHHH FVFFILMLIFKPGSLLYWIGIFGFHINLFLAGFNMLPIPPFDGEKVLKWNPFIWAIVGLP HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCHHHHHHHHH LIGYMLYMMFW HHHHHHHHHCH >Mature Secondary Structure SIFRFSQREIIDLTISVLAIAFIFSYPNFSILVFIISLIAVGSGFIFHELMHRTVARKY CCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH GAWSEFRAWYEGLILGFILKLVFGATFIAPGAVYIYKDYLTPEENGKIALAGPLTNVALA CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEECCHHHHHHH FVFFILMLIFKPGSLLYWIGIFGFHINLFLAGFNMLPIPPFDGEKVLKWNPFIWAIVGLP HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCHHHHHHHHH LIGYMLYMMFW HHHHHHHHHCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087