Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
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Accession | NC_000909 |
Length | 1,664,970 |
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The map label for this gene is mntR [C]
Identifier: 15668748
GI number: 15668748
Start: 504846
End: 505223
Strand: Direct
Name: mntR [C]
Synonym: MJ0568
Alternate gene names: 15668748
Gene position: 504846-505223 (Clockwise)
Preceding gene: 15668741
Following gene: 15668751
Centisome position: 30.32
GC content: 26.72
Gene sequence:
>378_bases ATGTCTCAAAGTATTGAGGATTATTTAGAGAGGATTTATTTATTCATAAAAGAAAATAACAGACCAATAAAAACAACTGA ACTGGCTAAATTGTTAAATATAAAGCCATCAGCAGTTACAAATATGGCAAAAAAACTGCATAGATTGGGTTATGTTAATT ATGAGCCATATATTGGGATAACTTTAACTGAAAAAGGCATTGAAGAGGCTAAAAAAATATTGGACAAACATAAAACAATT AAAATATTTTTAGTGGAGTTTTTAGGATTGGATGAAAAAACAGCATCTGAAGAAGCTTGCAAATTAGAACATGCATTATC AGATGAAATATTAGAGAGATTAAAAATTTTTATGGAGAAATTTAAAGATAAAGTTTAA
Upstream 100 bases:
>100_bases CCACAACATTTATATATGGTTAAATGATTTAATTATAGTTAAAATTTTTAACCGTAGTTAAATAATAACATGCAGGGTAT AAAAACCTTTCGGTGGCATC
Downstream 100 bases:
>100_bases TTTTTTAATTTTAGTCCAATTTTTTTCCCTAATTCAACTGCCTTATCAATCTCATCAATTTTACATTTAACCTCTCCAGA GGCATTTTTTAACTCATCGT
Product: iron dependent repressor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 125; Mature: 124
Protein sequence:
>125_residues MSQSIEDYLERIYLFIKENNRPIKTTELAKLLNIKPSAVTNMAKKLHRLGYVNYEPYIGITLTEKGIEEAKKILDKHKTI KIFLVEFLGLDEKTASEEACKLEHALSDEILERLKIFMEKFKDKV
Sequences:
>Translated_125_residues MSQSIEDYLERIYLFIKENNRPIKTTELAKLLNIKPSAVTNMAKKLHRLGYVNYEPYIGITLTEKGIEEAKKILDKHKTI KIFLVEFLGLDEKTASEEACKLEHALSDEILERLKIFMEKFKDKV >Mature_124_residues SQSIEDYLERIYLFIKENNRPIKTTELAKLLNIKPSAVTNMAKKLHRLGYVNYEPYIGITLTEKGIEEAKKILDKHKTIK IFLVEFLGLDEKTASEEACKLEHALSDEILERLKIFMEKFKDKV
Specific function: In the presence of manganese, it represses the manganese transporter mnth [C]
COG id: COG1321
COG function: function code K; Mn-dependent transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH dtxR-type DNA-binding domain
Homologues:
Organism=Escherichia coli, GI1787038, Length=120, Percent_Identity=29.1666666666667, Blast_Score=60, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y568_METJA (Q57988)
Other databases:
- EMBL: L77117 - PIR: H64370 - RefSeq: NP_247547.1 - ProteinModelPortal: Q57988 - SMR: Q57988 - GeneID: 1451433 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0568 - NMPDR: fig|243232.1.peg.584 - TIGR: MJ0568 - HOGENOM: HBG731603 - OMA: EACKIEH - ProtClustDB: CLSK876248 - BioCyc: MJAN243232:MJ_0568-MONOMER - InterPro: IPR001367 - InterPro: IPR022689 - InterPro: IPR022687 - InterPro: IPR011991 - Gene3D: G3DSA:1.10.60.10 - Gene3D: G3DSA:1.10.10.10 - SMART: SM00529
Pfam domain/function: PF02742 Fe_dep_repr_C; PF01325 Fe_dep_repress
EC number: NA
Molecular weight: Translated: 14588; Mature: 14457
Theoretical pI: Translated: 8.42; Mature: 8.42
Prosite motif: PS50944 HTH_DTXR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQSIEDYLERIYLFIKENNRPIKTTELAKLLNIKPSAVTNMAKKLHRLGYVNYEPYIGI CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEE TLTEKGIEEAKKILDKHKTIKIFLVEFLGLDEKTASEEACKLEHALSDEILERLKIFMEK EECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH FKDKV HHCCC >Mature Secondary Structure SQSIEDYLERIYLFIKENNRPIKTTELAKLLNIKPSAVTNMAKKLHRLGYVNYEPYIGI CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEE TLTEKGIEEAKKILDKHKTIKIFLVEFLGLDEKTASEEACKLEHALSDEILERLKIFMEK EECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH FKDKV HHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087