Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
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Accession | NC_000909 |
Length | 1,664,970 |
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The map label for this gene is yhhG [C]
Identifier: 15668729
GI number: 15668729
Start: 485578
End: 486003
Strand: Direct
Name: yhhG [C]
Synonym: MJ0549
Alternate gene names: 15668729
Gene position: 485578-486003 (Clockwise)
Preceding gene: 15668714
Following gene: 15668735
Centisome position: 29.16
GC content: 34.74
Gene sequence:
>426_bases ATGACAGAGATGGATAGGATAAGTATATCTTTACCTTCAAAGCTTCTTAGGGAGTTTGATGAAATTATTGCTGAAAGAGG ATATGCAAGTAGAAGTGAAGCAATAAGAGATGCTATTAGAGACTATATAATAAAACACAAATGGATTCACAGCTTAGAAG GGGAAAGAGCTGGAAGTATAAGCGTAATTTACAACCATCATGCCTCAGATGTTATGGAAAAAATTACTGAAATTCAACAC AATTATACTGATATTATCGTTGCTACCTTACATTTACACTTAGACCACGACCACTGCTTAGAAACAATATTGGTTAGAGG AGACGCTAAGAGGATTAGGGAATTAACAGATAGATTAACAGCCTTAAAAGGAGTTAAACAAGTTAAGTTAAGTGTTATGG TTCCAGGAGGACAGATTCCAGAATAA
Upstream 100 bases:
>100_bases TTAGACTAATAATATTAGTTAGTATTATTATTATCGTTAATCTTATATATTAGTTATTAAATAGTAATATTTGTTAGTTT GAAAATAAACGGGGGAGATT
Downstream 100 bases:
>100_bases ATTTTTATAATAGGAGTTTTCTTTCATCCCCTAATGGAACTATATTTTTATTTTCAACTTCGATATATGCATTCCATATA TTTTTACATTCACATTCAAC
Product: nickel responsive regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 141; Mature: 140
Protein sequence:
>141_residues MTEMDRISISLPSKLLREFDEIIAERGYASRSEAIRDAIRDYIIKHKWIHSLEGERAGSISVIYNHHASDVMEKITEIQH NYTDIIVATLHLHLDHDHCLETILVRGDAKRIRELTDRLTALKGVKQVKLSVMVPGGQIPE
Sequences:
>Translated_141_residues MTEMDRISISLPSKLLREFDEIIAERGYASRSEAIRDAIRDYIIKHKWIHSLEGERAGSISVIYNHHASDVMEKITEIQH NYTDIIVATLHLHLDHDHCLETILVRGDAKRIRELTDRLTALKGVKQVKLSVMVPGGQIPE >Mature_140_residues TEMDRISISLPSKLLREFDEIIAERGYASRSEAIRDAIRDYIIKHKWIHSLEGERAGSISVIYNHHASDVMEKITEIQHN YTDIIVATLHLHLDHDHCLETILVRGDAKRIRELTDRLTALKGVKQVKLSVMVPGGQIPE
Specific function: Transcriptional regulator (Potential)
COG id: COG0864
COG function: function code K; Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transcriptional regulatory CopG/NikR family
Homologues:
Organism=Escherichia coli, GI1789892, Length=131, Percent_Identity=35.1145038167939, Blast_Score=77, Evalue=3e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NIKR_METJA (Q57969)
Other databases:
- EMBL: L77117 - PIR: E64368 - RefSeq: NP_247528.1 - ProteinModelPortal: Q57969 - SMR: Q57969 - GeneID: 1451414 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0549 - NMPDR: fig|243232.1.peg.565 - TIGR: MJ0549 - HOGENOM: HBG646378 - OMA: DEHNCLE - ProtClustDB: PRK01002 - BioCyc: MJAN243232:MJ_0549-MONOMER - GO: GO:0006350 - HAMAP: MF_00476 - InterPro: IPR013321 - InterPro: IPR002145 - InterPro: IPR022988 - InterPro: IPR010985 - InterPro: IPR014864 - Gene3D: G3DSA:1.10.1220.10 - Gene3D: G3DSA:3.30.70.1150
Pfam domain/function: PF08753 NikR_C; PF01402 RHH_1; SSF47598 Met_repress_like
EC number: NA
Molecular weight: Translated: 16133; Mature: 16002
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEMDRISISLPSKLLREFDEIIAERGYASRSEAIRDAIRDYIIKHKWIHSLEGERAGSI CCCCHHEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE SVIYNHHASDVMEKITEIQHNYTDIIVATLHLHLDHDHCLETILVRGDAKRIRELTDRLT EEEECCCHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHH ALKGVKQVKLSVMVPGGQIPE HHHHHHHHEEEEEECCCCCCC >Mature Secondary Structure TEMDRISISLPSKLLREFDEIIAERGYASRSEAIRDAIRDYIIKHKWIHSLEGERAGSI CCCHHEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE SVIYNHHASDVMEKITEIQHNYTDIIVATLHLHLDHDHCLETILVRGDAKRIRELTDRLT EEEECCCHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHH ALKGVKQVKLSVMVPGGQIPE HHHHHHHHEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087