Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

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The map label for this gene is yhhG [C]

Identifier: 15668729

GI number: 15668729

Start: 485578

End: 486003

Strand: Direct

Name: yhhG [C]

Synonym: MJ0549

Alternate gene names: 15668729

Gene position: 485578-486003 (Clockwise)

Preceding gene: 15668714

Following gene: 15668735

Centisome position: 29.16

GC content: 34.74

Gene sequence:

>426_bases
ATGACAGAGATGGATAGGATAAGTATATCTTTACCTTCAAAGCTTCTTAGGGAGTTTGATGAAATTATTGCTGAAAGAGG
ATATGCAAGTAGAAGTGAAGCAATAAGAGATGCTATTAGAGACTATATAATAAAACACAAATGGATTCACAGCTTAGAAG
GGGAAAGAGCTGGAAGTATAAGCGTAATTTACAACCATCATGCCTCAGATGTTATGGAAAAAATTACTGAAATTCAACAC
AATTATACTGATATTATCGTTGCTACCTTACATTTACACTTAGACCACGACCACTGCTTAGAAACAATATTGGTTAGAGG
AGACGCTAAGAGGATTAGGGAATTAACAGATAGATTAACAGCCTTAAAAGGAGTTAAACAAGTTAAGTTAAGTGTTATGG
TTCCAGGAGGACAGATTCCAGAATAA

Upstream 100 bases:

>100_bases
TTAGACTAATAATATTAGTTAGTATTATTATTATCGTTAATCTTATATATTAGTTATTAAATAGTAATATTTGTTAGTTT
GAAAATAAACGGGGGAGATT

Downstream 100 bases:

>100_bases
ATTTTTATAATAGGAGTTTTCTTTCATCCCCTAATGGAACTATATTTTTATTTTCAACTTCGATATATGCATTCCATATA
TTTTTACATTCACATTCAAC

Product: nickel responsive regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MTEMDRISISLPSKLLREFDEIIAERGYASRSEAIRDAIRDYIIKHKWIHSLEGERAGSISVIYNHHASDVMEKITEIQH
NYTDIIVATLHLHLDHDHCLETILVRGDAKRIRELTDRLTALKGVKQVKLSVMVPGGQIPE

Sequences:

>Translated_141_residues
MTEMDRISISLPSKLLREFDEIIAERGYASRSEAIRDAIRDYIIKHKWIHSLEGERAGSISVIYNHHASDVMEKITEIQH
NYTDIIVATLHLHLDHDHCLETILVRGDAKRIRELTDRLTALKGVKQVKLSVMVPGGQIPE
>Mature_140_residues
TEMDRISISLPSKLLREFDEIIAERGYASRSEAIRDAIRDYIIKHKWIHSLEGERAGSISVIYNHHASDVMEKITEIQHN
YTDIIVATLHLHLDHDHCLETILVRGDAKRIRELTDRLTALKGVKQVKLSVMVPGGQIPE

Specific function: Transcriptional regulator (Potential)

COG id: COG0864

COG function: function code K; Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transcriptional regulatory CopG/NikR family

Homologues:

Organism=Escherichia coli, GI1789892, Length=131, Percent_Identity=35.1145038167939, Blast_Score=77, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NIKR_METJA (Q57969)

Other databases:

- EMBL:   L77117
- PIR:   E64368
- RefSeq:   NP_247528.1
- ProteinModelPortal:   Q57969
- SMR:   Q57969
- GeneID:   1451414
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0549
- NMPDR:   fig|243232.1.peg.565
- TIGR:   MJ0549
- HOGENOM:   HBG646378
- OMA:   DEHNCLE
- ProtClustDB:   PRK01002
- BioCyc:   MJAN243232:MJ_0549-MONOMER
- GO:   GO:0006350
- HAMAP:   MF_00476
- InterPro:   IPR013321
- InterPro:   IPR002145
- InterPro:   IPR022988
- InterPro:   IPR010985
- InterPro:   IPR014864
- Gene3D:   G3DSA:1.10.1220.10
- Gene3D:   G3DSA:3.30.70.1150

Pfam domain/function: PF08753 NikR_C; PF01402 RHH_1; SSF47598 Met_repress_like

EC number: NA

Molecular weight: Translated: 16133; Mature: 16002

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEMDRISISLPSKLLREFDEIIAERGYASRSEAIRDAIRDYIIKHKWIHSLEGERAGSI
CCCCHHEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE
SVIYNHHASDVMEKITEIQHNYTDIIVATLHLHLDHDHCLETILVRGDAKRIRELTDRLT
EEEECCCHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHH
ALKGVKQVKLSVMVPGGQIPE
HHHHHHHHEEEEEECCCCCCC
>Mature Secondary Structure 
TEMDRISISLPSKLLREFDEIIAERGYASRSEAIRDAIRDYIIKHKWIHSLEGERAGSI
CCCHHEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE
SVIYNHHASDVMEKITEIQHNYTDIIVATLHLHLDHDHCLETILVRGDAKRIRELTDRLT
EEEECCCHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHH
ALKGVKQVKLSVMVPGGQIPE
HHHHHHHHEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087