>gi|343385147|ref|AEM20637.1| outer membrane protein, 63..674 [Brachyspira intermedia PWS/A] MKKIFLLMSVVILAAACKSAPVATGPEDNSGFKTTEANNQNAKGLNLPDGASVRETPRGKVLVLHDPKSKADVGKPGSTYDVKFGFDNTIEIGTYKEAYNLVYQIINNNPGVRIMVEGNSSKEGPAPYNYTLSQRRSDKSFNYIIKLGVENSKLLKNAFGEALPEYPTLKENRRSEFIIIMTEDDLKKYNDFAKTVDINKETN >gi|343385148|ref|AEM20638.1| OmpA family protein, 695..1348 [Brachyspira intermedia PWS/A] MKKVLLIFSLLIFVIACKSTPTNTTPEDVVIADEPQAVEEEKPKPEEVVADTNTQSDTETLASGSEELYLPMDTSIRDTERGRILETTPKVIFKFVETNMPPYVEMSFNQVVEFLEKNPNVNIVLEAHTSNRGKAYPYNYNLSVVRAKNGKAYLLAKGIPSERVIESPLGEALPEYPTQNELRRYEFVIIANDQDLVKYNTYISNLDVRSESTYQGN >gi|343385149|ref|AEM20639.1| hypothetical protein, 1440..2594 [Brachyspira intermedia PWS/A] MRNIIVCTLLLTILINFKAFPESPTNEAPTAPTVSTNTSTTESSGLINAEYEKAFKFGTPTQKIATIAKIKRTKNEADIAMLASHYPEEKNNRVKSEIINFFKQNKNDNAKSIIEYAIKDENDSVRKDAYYLCSIYPDIQYEVPIMSEITNASGLVLDSMVNALGAIKSEMAADYLLEIYTNNTVGSSTKVEILRYFSITKNTKGEKICQNAAQNAGEPALVRYMGVVALGAYPSAENYEILQKLLAEDLPEITARVIYVLPEYSAYGDVKKDVIEAAKNDSDSVRIYAIKALSNYKSEPEIEELLIYRLKNDNSEAITMEILNLYKESAPTGNMYEAIKTLATSSASDKIKNLAKSVIGEEGTSSDTTIEESLTGIKNDSAAN >gi|343385150|ref|AEM20640.1| hypothetical protein, complement(2875..3444) [Brachyspira intermedia PWS/A] MEINIMRNFDFWHSTYKIVSKGFVCWNCENNVASERGISSDNGHSSVLICPYCNAPNIILPNGYNLVKPLYGRDIKKLPAGIKNIYDEARKSMQVEAYTGAVMLLRKILMNISVDNGAENGETFKYYINFLYNENLIHKKQKSLIDKIRIVGNEANHQIESITKETAENVFKLTEHLLLNNYEFTDDDI >gi|343385151|ref|AEM20641.1| Sua5/YciO/YrdC/YwlC family protein, complement(3579..4175) [Brachyspira intermedia PWS/A] MIINLDKNNSESIEYAANEVIKVINGGGIVVSPTDTVYGMLADAFNTDAINRIYTIKDREKNKPLLILSKDLESVKKFSNKEVPDIIKKNIPGELTFIVPLLEELKNRFTYLKDTVALRIPNDKYMQLILKGTNPLVAPSANPSGYGVILDGNELAELYKDKADLIVNAGVLENKMPSTLYDCLENKVLRQGSVHLDI >gi|343385152|ref|AEM20642.1| response regulatory protein, complement(4192..5214) [Brachyspira intermedia PWS/A] MNENILVVEHRADLLDRFVDILRERHYNPIATKSRAQAVNISNESTLDLILLDADIGDSQGLQLLDTFKNQESTKGTPVILLSTPYRKMEFIEEAINLGIDGLIFIPFDEMELVVRVNSCLKYRKLYVEHQKLIKQADYLQNSLADMTEVSNRNYQSYKDAQKKYDDILNVDLETGLWNKKEFYEQFSRLLYETVRHEETIVLACFSIDGLDSIISEYGIIAAEEIMLKFTEVLRRTTRREDILARFDNNEFMVAFNRMNIRLYDKKLEEIRSFVDKNELEYNGIIIKYTISAGISYTAYKKNYHIEGMEKEIAPVLLALHNAKRRGFASLFVHPTLIKK >gi|343385153|ref|AEM20643.1| membrane protein, transporter, 5713..6588 [Brachyspira intermedia PWS/A] MINDSNNNIKLGSLFIIFSALSFSIMEIAVKISGSNIPVMEQVFARNFITLFISAFVMIKDKERPFPNKSNILSIVCRSVSGYLGIICYFYATNNMVLADASVLQKTSPFWSSFFAFILIKEKVLKMQWLGMIIAAIGSIFIIKPTMNSNVFPAVIALSAAMFAGISYAIIGSLKGKESNSLIIFYFSLFSCIFSLFFVKSFVVPNLFEVLLLLLIGIFAGFGQFFLTIAYKKAPVSAVSIYNYTGVIFSYIFSVFLFKERVDIYSVIGMLLTIFAALLVYFYKNKIYIKN >gi|343385154|ref|AEM20644.1| Ferritin CCC1 C, Ferritin CCC1 like C, 6653..7540 [Brachyspira intermedia PWS/A] MKMDNNISKSTMKLLLEMQQNEVTEHAVYLNLVKFVKKEDDRKVLENIAKEEYAHSKILEKYTNKKLKPQRLKVLKYFILSFILGYTFVIKIMEGGEKNAENIYSKIVSEVPDAKKIAFDEDEHENKLISILDEDRLKYAGSMVLGLSDALVEISGTLAGLSFALQNNKLVALSGIITGISATLSMASSEYLSAKAEGDKNAFKSCSYTGIMYLITVTLLILPYLIFPSNHYLYALITMLCIVVLIIFFFTYYISVAKSLPFKKRFIEMAGISLTVAGISFLIGLLVKQFLGIDI >gi|343385155|ref|AEM20645.1| hypothetical protein, complement(7541..7960) [Brachyspira intermedia PWS/A] MKKIILIFFLSIYTIAVAEQKIFVSTKLKGNDLRKEILKWVKNEARNNKFSSYDNGLVYLFFVSNNVINNNSLCFDINFHLEYDKFIVNFSNTKLINNSTGDTKDLKFSTWDTLTNSGWFKEYNEIISNIIDELESIVS >gi|343385156|ref|AEM20646.1| hypothetical protein, complement(7973..8503) [Brachyspira intermedia PWS/A] MGKKLPLIILSSTIITVSAALIVLKRRNGKGEFFIKSYDGKFALIFNNEWKLSKVKNELNENSNLEAINNKNGVCFIMFSKSKEDLNNISLEEYNTNILHSINGENIIYSNKIKVNNKEMYITEFDSYYENTLVHYLLYTLETENYYHQVMVALIKNDNKKQFKQINNILSTIREL >gi|343385157|ref|AEM20647.1| arginyl-tRNA synthease, complement(9054..10643) [Brachyspira intermedia PWS/A] MLKKIISNILKEALKEYLKDTDVKDIESYIEIGYAVDDKFGDYACPVAMRLAKVLKKNPLEIANSITEKIDKKYFDKIEVAKPGFINLTLSYNYINECINDLISNDDYGKNTVEDKKKILVEYVSANPTGPLHIGHGRWAAIGSALSNILKYAGHEVYQEFYVNDAGEQITKLNESVKAVKEGREIPEDGYHGEYIKDVAKQDGVPKDIILESQKKLLERFGTHMDNYASELKIREGGELEKTMDFLDKEGLLFEEDNAVWFKSTKYGDDKDRVVKKSNGTYTYFAPDITYHKNKIDRGYHYLIDILGADHHGYVPRITAAVRAVSKDTASLKVILGQLVRLYRGNELVRMSKRTGDMISLEDVIDEIGVDPTRYFLLMRSYSSSLDFDLELAKKKDNDNPVYYVQYAYARICNIFFKLEEKNMSYDDNKAFDISKIANESSLKLAKIILRFPDEIYEAAKSLEVYTLINYTYEIAGALHRFYYDNIVLEENAEIRQERLTLIKAVKKILGLCFDIIGISKVERMWSEE >gi|343385158|ref|AEM20648.1| Signal transduction histidine kinase, 11679..12452 [Brachyspira intermedia PWS/A] MKQNFYINSKLKDLISNIIYDVQNYNSIITKYIDLERCANNYCSESRATIVRQSFLINRTMESLSDFNDINSDSFKLNMNFENISVIINEALDSVFDLFKSKRTKIKLDDKILTECIVLMDRDKIKRSILNIFSFIYSLIKVNTSMNISYSLINYGEDKEFLLMNGVDNISEKDEKILDLNEECIDISITFECDNIPDDIKRMLFKTPLISYDNFNFNNLYLYTAYRIIREHYGNIWLESLKNEQRINIIFPAKNKL >gi|343385159|ref|AEM20649.1| DNA-binding response regulator, LuxR family protein, 12449..13408 [Brachyspira intermedia PWS/A] MNYVLGYILLIAYLFAFIIGFSTILFSIIYYIIERVAWLKYYIIFLFTFAFLLLIRAIKLLSFLTVPYFMSNNIFNTLYFFSFSIAMSLMLYFIPAFLYRFLNIKWTFKQNIAYITISIIHFILGILGILIKFDMYIISSIIFYISIIVIFIIGAVNYKNIEDKTMKLIVKILGLITIIIYPVLIYQLIIYRVEAADIGSMDITLVLFYIWWNLVMLGYLSWYFINIVNNKMANSNNMKNEKTIKDDIKTENESSKEIEINLTRREKEILSYLLDGKTNKEVSLILSISLNTVNNHVANIYEKSGVKNRVELVNKFSKN >gi|343385160|ref|AEM20650.1| hypothetical protein, complement(13522..13815) [Brachyspira intermedia PWS/A] MTIDKIGGTSNIQQKSNIKYNEKVSKMGSDRIEISNESRLALQNEKLVNIIKEAPDVREEKIAEAKKRLELYMQDGALREEVLNSLANSIIDSMPIE >gi|343385161|ref|AEM20651.1| tetrapyrrole methyltransferase, complement(13805..14506) [Brachyspira intermedia PWS/A] MEDITIRALKILRNVDFILAEDTRVALKLLNFYNIKNKLFSYHSHSSEYRINEYINEILDGNSAAIVSDAGTPCISDPGVSIIKLAIEKNIKIVPVGGISAFTSLLSVSGISGNTLFVGFLSNKSGKRRNQLKDLYNNQKTIIVIYESVYRVKECIEDIVNIFGEKTDIVIGREITKQFEQIIRSEAKNILDFFTDGSILTKGEFCIIIDNRKSKVCGANAENNSCKESDYDN >gi|343385162|ref|AEM20652.1| hypothetical protein, complement(14587..14700) [Brachyspira intermedia PWS/A] MKSLIYNKNKSNTGESLLKRIIKKSSIIMILKPMKNL >gi|343385163|ref|AEM20653.1| hypothetical protein, 15467..16393 [Brachyspira intermedia PWS/A] MDIKEKISNIKKKLIKRKDILFSVIVSFILHIFLFSFINTSIMQEVFAYEKAKKEAEERYKKDNYMFLVETPEVEEEESKEDTPFASDKTLRSKGQTDVKPSKVFSDTSVFSFLGDGANSPIIERRPTENIKPNNNQIQPKEKKELGNEISRDKVETYKPKNPGIKGDTKIPASFEEGADRAVVFSSETGSMQLGTKAQEYFWYFYALVGSIRDSWYLTIPNQAHYLGLIRTDEVEVLLSIDEEGNIEFEKFLKTSINGQTSLDNSCSKAIEYAKKLKPPPQGLWDDYAENGKIYIPFKFIYQNFSRE >gi|343385164|ref|AEM20654.1| alcohol dehydrogenase, 17394..18563 [Brachyspira intermedia PWS/A] MSRFTIPRDLYYGDNAMEELKNLKGYKKAIIVTGGSSMKRGGFLDKCEKILKDTGLEVKIFDGVEPDPSIETVYRGAEAMREFNPDVIVALGGGSALDAAKAMWVFYEYPEKKFDDIKTPFTMPKLRKKAIFAAIPSTSGTASEVTAFSVITDYSTNIKYPLADFEITPDIAILDYSIPMTMPETVSADTGMDALTHSIEAYVAGLRTDITDALAMKAIDMIVHNIEKAVKGDKEGRAKLHVAQCLAGMAFSNALLGIVHSLAHKTGAEFHITHGRCNAILLPYVIQYNSKVCADRFADIARMLKLSGNTNEELTASLVNKVKELNSKLGIKQTYKDNGVTEDHFKEKCDDIAKNAVADPCTGSNPRETDVSNMKKVLEAAYYGNDVNF >gi|343385165|ref|AEM20655.1| hypothetical protein, 18781..19194 [Brachyspira intermedia PWS/A] MKRRGEVNIVVADYLDNKFIPDTVDINITSYDLRHIIISRWYYGVYLIAKNYLINNLICTDDKKNFHHKTNEDKHIFSIWHRIANTNNGNFHSDLIQGEKLAELREYYEYSGNLCNDTDFDNARRIFNEIYEILNTF >gi|343385166|ref|AEM20656.1| hypothetical protein, 19208..19681 [Brachyspira intermedia PWS/A] MMFIQDEYDAINHYVNKLKENGLGELKIVDKEDYYVIYIFIKRDLNIRKIINKISYEVHNKFKIYKTIQCQYFYDWYKDIKDFEDLLKKENIRDITDSFIFNEINYNYKKIEIVKYKLLETNKFDNYIPNFDIYNDIENSNIMYINELGEINGATAA >gi|343385167|ref|AEM20657.1| hypothetical protein, 19692..19958 [Brachyspira intermedia PWS/A] MSVKSVKLTQLNFIQKDNPINMETIGIGLGFNASYSILDDNNTIQFNLGIQLKLFQEDDNKNKIDLGIMQFRLAGIFSFKNGIDKNYL >gi|343385168|ref|AEM20658.1| sodium:alanine symporter, complement(20221..21633) [Brachyspira intermedia PWS/A] MKIINSIITNTNNVMYGYLLLAVFFVISVFFTIRLKGIQISHSIHALKLLFSKHEKGDGVSGFVSFCISTASRVGTGNITGVMGAVSAGGPGALFWMWIMALLGGSLAFSESTLAQLYKEKDSQGKFIGGASFYIKSRLKKPILAILFALCMIFTYTTFNGVQANTISNALSKYNVSVYITAIILTIITGIILFSKKRDTITHACVFIVPVMAIPYILIGLFIFFSNLPSVPLAFQNIFVQAFKPSAVFGGAVGITISNGLKRGLFSNEAGMGGAPHAAAAAHTSHPCKQGLIQMFSVFTDTILICSISGFILLLSPEAMNEVKNMEGINLFQYAMESHLGSFGSIFITVCILFFSYSSILGNFFYIKTGAAAVKDNFIAYIIVGLMTIVMVFAGSLAEFKTIWGAGDMFMGFMALLNIIVMVILNKPVYLLTKHYVSQLKEHKEPTFHKNLIEELKTDDAITQWDDKNN >gi|343385169|ref|AEM20659.1| hypothetical protein, complement(21697..22908) [Brachyspira intermedia PWS/A] MIKKIFIIFFTAITISSMSFAQKKIIIFETDYSNNYNSYAVKDIIIKNLFVNSDFRIIPYMPYKKNNYKEIKSKIKELTLNNNADLSITYDLFKYKNGLVLNYVIFNREKPNEWKEKNIYSKEENFFESINKVLEDICSYSQKNNNLITENEYIPLIGYYTQIVNSNENNNDEKKIYEMFFNFYKDNIYFNMDYLEYLTEKGNRNSFNDMNIIVENMEKSLDKNNHYYLSALGDLYYSKYKINVENEDIETAIENYTKAVNAKNYNYIYYKKLANAYILKNDYDNASKSYNEAIKIYDKDTALIKDAVYLLKRDMNKNGNLVIEYLKKIIDINKNDDEALEELAGIYENLGDKYNAQIYYNKLLEAINYNLYIINNEKPNPVLYDKYIKKRNDITKKLDKLKI >gi|343385170|ref|AEM20660.1| methylenetetrahydrofolate dehydrogenase, 23015..23860 [Brachyspira intermedia PWS/A] MSDILDGRELAKEIKERIRKETELFEKKPRIDFLYFEDDKSTEVYFTRAKKQAESVGMIGSLHNLPVTTTEKDFLTLIEYLNKEKETSGIMIQMPLPKHICKKKVYETISIEKDADAISHVNLGRIFIGDSNLAPCTAKSAMALIEKSGINIEGANAVVIGRSEIVGKPLAHLLLQKSATVTIAHSKTKNLKELCKNADILCVSIGKAEFITGEYIKEGAVVIDIGINVLEDGSLKGDVNFEEASKLASYITPVPNGVGSVTVSMLLDNVLYLHKNIMNKK >gi|343385171|ref|AEM20661.1| transmembrane protein, 23917..24354 [Brachyspira intermedia PWS/A] MDIIFALLSSIFASLTAILIKIGLAGINSNLATAIRTIIILIMSWVIVFYTNSVNSINTIETIKNLNTKTIIFIVLSGIATGLSWLFYFKALQIGNVNKVIVIDKLSIVFTIILAAIFLKEALNIKIIIGVLFIVAGTLIISLQS >gi|343385172|ref|AEM20662.1| NfeD, Membrane-bound serine protease (ClpP class), 24895..26238 [Brachyspira intermedia PWS/A] MGFMKKFNNILIMLFLGIFIFSNYLYSKDGKVYVIKKQEFQEINRWYAGYLKKAIDEANDKKADLIILELDTPGGLLSSALSIKNYIMESNVPVVVYINKNALSAGALISLSAKEIYMSDGSVIGAATPVYLNGNEPKKAGEKEVSAMRAAMRSSAETTKKNAKAAESMVDETIVLTKKSDGIDLDDKTLLTLSADEAVSINIADKKANSINEILELKNMSNAEIVNIEEEGYDSVLKFLLNPLVLSILMAIGVAGIYIEIKTPGFGVGGVTAIIAFAVFFFIQFFSGSSTFLAPAIFVLGAILLCVELFLIPGFGITGILGIIGIVAGVFISFGIHNIAVASFVIFISLLIDIILIILIARFMTKSKDFKDKITLDSDTSGYHSSVSYDDLIGKEGVADTFFRPSGYIVIDGKKYDAVSEGEFINKGSSLKVILVEGNRIVVKKSS >gi|343385173|ref|AEM20663.1| hypothetical protein, complement(26372..26611) [Brachyspira intermedia PWS/A] MTINRINNNVQQTAQVQMPAPKENIAAQNPTNIQKISQQGSGMSPLSSRYTYAIGRDGKRYVLQLRIDISSVRAFSSLA >gi|343385174|ref|AEM20664.1| NAD-dependent epimerase/dehydratase, 27163..28101 [Brachyspira intermedia PWS/A] MKRIIVTGGAGFLGSHLCERLLKEGNYVISIDNFFTGSRENIEHLLDNKNFESIRHDITEPIHIECDEIYNFACPASPIHYQRNPVHTFKTSVFGILNMLNLARDCNARILQASTSEVYGDPLEHPQNESYWGHVNPNGIRSCYDEGKRSAETLMMDYYREYKTDIKIIRIFNTYGPRMNEHDGRVVSNFVIQALQNIPITVYGDGSQTRSFCYCDDLIDGAVKMMNADNFIGPVNLGNPAEMTVLEFAQKIIEMTNSKSEIVFKDLPKDDPIKRQPNITLAKEKLNWKPEYKLEDGLKKTIEYFDNYLKNK >gi|343385175|ref|AEM20665.1| hypothetical protein, 28397..29032 [Brachyspira intermedia PWS/A] MKSKIFLIIMIILFAVSCAKNNPANPVQNTNNVTKNTEDNSNSGSTDNNLDNTSSDNNGNSGENESTEPNNHGNSNDNETVGGDNNIDSKPNEPPIGILDGIVEYGGKAQLTTKGLDGVPLTGPEDIQIYVDIYQEEKIASVHIRNIFHFDNIQLDNEKHTYYTIDDRGDYTLTMKVGDDSITDFNIIILFKGENYRYYITAEKLEKIRRN >gi|343385176|ref|AEM20666.1| ZntA, Cation transport ATPase, 29222..31498 [Brachyspira intermedia PWS/A] MKMTLKIGGMHCAACSRAVERALKKTEGIEDANVNIATEKAVFNYDEKKLKYDDIVNVVVKAGYQVLAKEEDPAIVKAREIKEQKIRLIVSAIFSIPLFYISMAPMVSFVKFPIPSFLVHHINPQVFSIVAIFLCVPVMISGYKFYTLGFPALFRGSPNMDSLVAIGTTAAFSYSIYSTVLAFMGLNPHGENLYYESAAVIITLVQFGKYLEARSKGKTGEAIKKLMGLQPKTATIIKDGEEKEIKIADVKVDDIVLVRPGEKIPVDGEIIEGYSSVDESMLTGESIPVEKSVGDKVVGASINKTGSFKFKAQKVGADTALAQIIKLVEDAQGSKAPIAHIADVVSSYFVPAVITIALISGIIWFIALHNFVFSLTVFVSVLVIACPCALGLATPTAIMVGTGKGAELGILFKNAEALEVSEKINAVMFDKTGTLTEGKPYVTDIISDDKDKLLLIAASAENGSEHPLGEAIVREAKEKNIKLLNIENFKAIAGFGIEVFIDNKKVLMGNDKLMNKENINTENYNSYMDKLSKEGKTPMYVAYDNKLLGIIAVADKLKKESIEAINRLHKLGIKTAMITGDNKNTANSVAKEAGIDIVFAEVLPEEKSNEVKKLQDQGLTVAMVGDGINDAPALTQANVGIAIGSGTDVAIESADIVLVKSNTNDVVTAIELSKATMRDIKQNLFWAFCYNVIGIPIAAGVLHVFREPLIASSIGGFLTAIMGKDLLLNPIFAALAMSLSSVSVVTNALRLNFFKPSK >gi|343385177|ref|AEM20667.1| hypothetical protein, 31868..32470 [Brachyspira intermedia PWS/A] MGYHFTGRTIHEYLGFLIFVFFILHNVMNINWYKNLPKGKYNLNRSLNTFINVMLFICMFGLVISGILFNRDLVEFLNLSSIKVFNKKMHIVCSYWGFILMSVHLGMHWGIFINMSKKIINIKKQIYILIGLIIAVYGVISFIKRGFYINMFVIAKVPKAEEAAIFFFMDHVAVMGVFIFITYYLHRLSNKLNKMSIQQQ >gi|343385178|ref|AEM20668.1| ABC transport related protein, 32794..33846 [Brachyspira intermedia PWS/A] MIVLENVSKVFKTAKNKQLNAVNNVSLKINKGEIYGIIGFSGAGKSTLVRCINLLERPTSGKVYVGGEELTSLKPRELREKRKKIGMIFQQFNLFGSRTVFKNVAYPLRYRGLSKEEIEKKVMSLLELVDIKEKAYVYPSQLSGGQKQRVAIARALANDPQILLCDEATSALDPQTTSSILKLLKKLNEELGITIVVITHEMGVVKELCHRVAVMNKGCLIEEGNIFEVFSHPQNQITQDFIDTTSNVSKIYTLIEEKHNITELKQGECIVRLKYKKDSVGEALISHISRKFNVDVNIIFGNVELIDESLLGGLVVILHEKEKHGITKSIEFLNEQNVDVEVIKDARYDE >gi|343385179|ref|AEM20669.1| binding-protein-dependent transport system, inner membrane component, 33851..34507 [Brachyspira intermedia PWS/A] MPNVMADLPRLYQSIIQTFVMLFYSGIISFFIGGFLGVLLIVTKKFGIMENILLYEVLSKVINFFRAIPFIILLAMLVPLTRFIMGTAIGVKGAIIPLIFGTVPFFARQIESALSEVNPGLVEAAQSMGSSPIAIIFRVYLKESIAPIARGTTITIISLIGLTAMAGAVGAGGLGTYAIQSGYYRNKLDIIYVSVILLVILVGIIQAIGNFIVKKSTH >gi|343385180|ref|AEM20670.1| L-lactate dehydrogenase, 34539..35495 [Brachyspira intermedia PWS/A] METLLKRRKAVLIGAGHVGSHVGYALAAQGLVEEIIYIDIDEKKAFAQALDIFDSTVYLPHRVEVKAGSYKDIDDADIMVVCAGPLPNMNQTRMDTLGATIEVMKDITSKIKNTKFSGIIINISNPADVITHYLQNKLNYDPKRIISTSTTLDSARLRRAISEAINVDQKSIYAYALGEHGESQMVAWSAVTIAGKPLFELMKEKDKYSKLDLNELAYKGRRGGWDILEGKGSTEFGIGTALAEVARAILCDEHRVLPVSVYLNGEYGQNDVYASVPAVLGRNGVEEIIELNMNDEEKKLFNESCSVMKKNYELALNM >gi|343385181|ref|AEM20671.1| BlpG, outer membrane lipoprotein, 35612..36409 [Brachyspira intermedia PWS/A] MRRIILFFIFIFSVSCSNADKNVHIVRVGYIGESDKIIWQEVMKKVSNDNIEIELVSYINYSSPNKALNDGEIDLNNFQHYAFFNKELEDKGYELTAIADTCLAAMNIYSDNITNINQIKENDKVAIPNDDSNRGRALKVLAAAGLIKLKNIYKQNPTINDIKENKLNLDIIEVDAGTIYGLLPNIACAVINSNFALNFGLDPYRDSIFKDNPSNYTDKNYINIIAVRTEEKDNEIYKKIIKAYQSDEVKDIYDKNFKGVYIAVW >gi|343385182|ref|AEM20672.1| BlpF, outer membrane lipoprotein, 36425..37225 [Brachyspira intermedia PWS/A] MGGNYEIFIKIFLLINIISCETPEPEVVTVGHIGEFDYDIWRQIDEELRIENTKLELVYFQDYELLNKALDDGEIDLNSFQNYIYFVNETNKYNYDLHILGKTFVAPMNIYSKFITNINQISSNAKIAIPDDEVNLSRALQVLEVANIIKLERFDNNFYSITNIIENNLNIQFIPMDASIIYFNMDKVDAAVINYGFISDYINYKIIFYDDISKYSHAGLMSYANLIVCREKDRNSNLYKFITESYRQKMKKNIDKNILDGLIAID >gi|343385183|ref|AEM20673.1| BlpE, outer membrane lipoprotein, 37250..38038 [Brachyspira intermedia PWS/A] MKKLLFILFLLLFIISCNCKKEEVVKIGYIGELDMSIWEYVSNEMKEQNILLELIQFSDYSIINKALNSGHIDLNHFQHYAYFVNATNKNDYYLSIIDKTFIAAMNMYSENLTNLSQLKLHSKIAVPKDEVNLSRSLKILESIGLLRLTKKNNVNYNFTTNDVRENYLQLEFVAVEADDVYSVMSFVDGAFVNLNLNFDFKDSNILYYDDPSKYESDMYINLIVARLEDEDNGVYKKIAEAYKKRIKEVVESGKLKGIIINY >gi|343385184|ref|AEM20674.1| BmpB, outer membrane lipoprotein, 38117..38932 [Brachyspira intermedia PWS/A] MRKILLLISSAILSLMILSCGNTSSGDQKIVKVGFAGESDYQIWNPIVEKLAEEGIKVELVSFSDYTIPNQALNDGEIDLNAFQHYAYFNDEVSNKGYDLTAIADTYISAMNIYSTNITDVKQLKNGDKIAIPNDPSNGGRALKVLQAAGIIKVKPEAGDTPSVSDIIENPLNVEIVEMDAGAIYGVLPDVACAVINGNYAIDFGLNPGSDYIFKDDPSIYSGKSFVNLIAARTKDKDNELYKKVVATYQSEIVEKVYNENFLGSYLPTWK >gi|343385185|ref|AEM20675.1| PTS system, IIA component, complement(39016..39444) [Brachyspira intermedia PWS/A] MKPSLILMSHGNFAHEIMESAKMILGEVAGYHTVCMAAEDGFEGTSRKLQSCLNEIEDAKDIIILADLYGGTPFNIGNIFSKKEKNKFNIRLIAGMNFAMILEYFSSDKEDINELVNDIISTGKDAILEPSLSEEDDDIDLD >gi|343385186|ref|AEM20676.1| Beta-lactamase, complement(39445..40407) [Brachyspira intermedia PWS/A] MNKFDTISSMLNEALEKNIIYNVSYSFIKNDDIKNNYIGIYGTNNSNKVDHNCIYDLASLTKVIGTASMMLKLLDLGKINLDDKAVKFCSNFKDNNTTIEELLLHNSGLKADLDDKTNIDRNKIFENTIINKENYHKTIYSDIGFIILGFIIENITNLNLDKAFKDYIFNSANMNNTSYYPSNKDYCIPTEITDKRGIICSEAHDSKAHALGEIGSAGLFSTLEDLNIFARSILNDDEKVLSHKSIKKLIDINIGERTLGWDKRYGKYTLYHTGFTGTSILINLNSKEAMIILTNRIHPNRNNNAYLELREELNKIFMEE >gi|343385187|ref|AEM20677.1| N-acetylmuramic acid-6-phosphate etherase, complement(40439..41347) [Brachyspira intermedia PWS/A] MENLDNLVTESVNENSKNIDALSTIEMVKIINSEDVKVAEAVGKESENIAKAIDEIAKRYIKGGRLIYIGAGSSGRMGTLDAVELTPTYNVSPERAFGLIAGGKEAMYRAVEGAEDSRELGKEDLVNCKLTNLDCVVGIAASGRTPYVLGGLDYAKEVGALTVMISSNRNENVEKSADIVITPIVGAEVISGSTRMKSGTAAKMVVNSISTGVMIKSGMVYGNYMVNVLPTNKKLETRAIRMISSITGLDIEKSSKLFEESGKSVAVSIIMNKASIDKDKAQKLLKESNNMVRIAIEKAKNA >gi|343385188|ref|AEM20678.1| transcriptional regulator, complement(41367..42224) [Brachyspira intermedia PWS/A] MNAYLIIRDKYEDFSKAYKKISNYILSNPKEVIKLTALDISKNCGVSSASVVRFAKDLGFKGLDELKISIASKNGDDDNKYNINTIISADDNVEELCDKIMLLIKSSNEDFFYQLDKNALEKAFKLIRNARNIYMLGIGASSLSAYDLFHKLKRANFNAFFYEDAHLNAEFFNYLTEEDVVIAFSYSGRTNEVIYPVKIASAKKASIIAVTRKKTNNLSKMADVLITVPNNEELTRMGAITSKYSSLIVSDLLYFGAIQKDFENIKDNLINTSILTRELKLDDEE >gi|343385189|ref|AEM20679.1| PTS system, IIB componen, complement(42240..42716) [Brachyspira intermedia PWS/A] MSIVNARVDERLIHGQVAMVWTNTVGATRIAVVNDQAVKDETIIAALKISKPAGVKLSILSKAKAAEKFKEGVYDEDKIFLITKNIEDMNEIIKNGVPIKTVNIGNVAKKEGSVQIKKSVNLTEDDIALIKSMIADGINVTAQMLPNESDQSIEAYLK >gi|343385190|ref|AEM20680.1| PTS system, IID component, complement(42748..43575) [Brachyspira intermedia PWS/A] MENNKLTKSDINKVYVRNLFGFQWGWNYEKMQGLGYAWVIMPALKRIYKNNPEGMKKALKMQLGYFNTTPAMSHLIIGADMALEESLGEKSEEAVSSLKTGLMGPFAGVGDTLFLAIYRAIVFSIASYIALDGNAIGLIVPVFACLAVLFLRYKFTYIGYNQSKKLAVGFANSIAPITEGAAILGLTVVGGLIASVITYKLNLTFTLGEVSLDIQSMLDKIMPSLIPLLVVLFSYWLLGKKKFNSTHLIVVIIAIGMVLGNSQGMLDFVIGLFSK >gi|343385191|ref|AEM20681.1| PTS system, IIC component, complement(43607..44410) [Brachyspira intermedia PWS/A] MQELSAIVILILCIYTVIGVLDQISIQIGVYTPLFAAAFTGFLLGDLKSGLFIGATLQLATLGVATYGGATVPDYLSGAIIGTSYAIISQKGAEYGIAIAVPIGLLLTQLDILGRMTNLIFQHKADRYADEGNYRGVEMCNVLGILPWVLSRVIPVFIGLFFGETVIQTINNFIPGWFMNGLKAAGALLPAMGIAILMRYLPLKKYFYYFIIGFVAIAFSGGNMSVLAVALLGFAFAALNYHRTMEKGAIKETAGAASDDDEIEIDG >gi|343385192|ref|AEM20682.1| multidrug efflux pump VmrA, complement(45105..46475) [Brachyspira intermedia PWS/A] MSVSSNPLYYEKIHRLLFKYGTPSIISMLVGSLYNIVDQIFIGQGVGINGNAATNVAFPLTIICIFISLFLGVGGASLYSILLGKGENKHASIIIGNSITLSFVFGIILSIVVKIFNTKLMIAFGSTKEVLDYAVIYTDITSFGFTAYIFSMVMSYTIRADGSPKYSMASVLSGAIVNTILDPLFIFVFKMGIAGAALATVIGQYVSFFIAFAYIFKFKNIQFEKQSFIPEFKSILKIFALGASAGFSNLSMMILQIVMNNVLSYYGSNSIYGGNIPLAVSGIVAKVNMLVMSFVIGASQGSQPIIGFNYGAKNYGRVIETYKYTIIITSIITFIAFLLFQFFPRQIVSIFGDGSELYFQFSEKYMRIFMMLMIINAAQPVTGTFFSSLGKAFKGAFLAVTRQTLFLLPLIIILPRIFGIDGVMYAGPIADGAALIVTIIMVTIEIKHLKSMQSNI >gi|343385193|ref|AEM20683.1| multidrug efflux pump VmrA, complement(46553..47935) [Brachyspira intermedia PWS/A] MNNDVVSNPLYYEKPYKLLFKYATPSIISMLVGSLYNIVDQIFIGQGIGINGNAATNVAFPLTIICMSIALFHGFGSASMYSILLGQGNNKRAATFIGNAVVSALVLGFIFTVIVKLFNKNFMTMFGSTKEVLPYAIEYTNITAFGFIPFIFSTMMSHIIRADGSPKYSMMSVLSGAIVNTILDPIFIFKFDMGMSGAALATIIGQFISFAIVFRYLFRFKHITFERDNFKVDPKNILKIFSLGSSSGFNQLAMMAVQITMNNVLSYYGTNSIYGGNIPLAVAGIISKVNMLVMAFIIGTSQGSQPIIGFNYGAQNYDRVIKTYKLTITITTIMAFTAFLLFQLFPRQIVGIFGDGSELYFHFAEEYMRIYMALMVINGIQPVTGTFFTSLGKAFKGAFISMTRQIIFLLPLIIILPRILGIDGVMYAGPVADGAALIVTVILVSKEIKKLKILEKNKSN >gi|343385194|ref|AEM20684.1| ATP-dependent DNA helicase, 48086..50065 [Brachyspira intermedia PWS/A] MNILENVSEVQREGILHTGTPLLLLAGAGSGKTLVITRKIAYLINELEIAPENIMAVTFTNKAAHEMKERVCDLLPDIKPSRLFIRTFHSACLRILKENAHFLGYKSNFLILDEGDKSSVIKRIMKEEEVPKSIGQKIITRFISNVKNGIDDGIVFDRDIFENVYKKYTEYELNENVMDFDDLILNTIKLFEQENKVLNYYRNRFKYILVDEFQDTNPQQYKLIKLLTQEADNDLTVVGDDDQSIYAFRGADVLNILDFEKDYPNTKIIRLEENYRCPKDIVEAALSVIKNNANRHEKNVFSNKPNEFKIENWICYSDLEEARSVVNEIESLFDNGFEARDIVVLFRTNSQSRAYEKELRLHSINYKIVGGVGFFERIEIKDAISFLRLMTGFGDNFSVRRTINVPPRGIGEKSFSNFETFANTRKLTLYNAIDYIDESSLTKKVISNIKAYKSIIEEYAVKIKEDIINEEGIHIELLFFEFLKDIDYFSIFKGDGNERVITAEENIKELFRGFYDYKSMEPNATLITFLEENTLYRDLTTNDDKEDYVTLMTIHNAKGLEFDVVFMTGMEQGVFPHYFSLEEEKGIDEERRLCYVGITRARRKLYLTYSKKRRVSTGIMEQIPSSFLMEIPKKLMLIKEKANYYSGSYMDIDEDAFDY >gi|343385195|ref|AEM20685.1| hypothetical transmembrane protein, complement(50387..50905) [Brachyspira intermedia PWS/A] MKNNIMSVVKSKKFIIISASIVAAALLIAAIRFLGLQYYMFYLMHDFDEVLEALLKIAVFAVMIMFAIVLFKKIDAKDNKESKSNESESDNKKDVIVVKEKNSKSSKRLFIVMVVIAVLALIALFIFSSRFFGMHYMLYNLDDIIEGIFQLVVVVAVIGFGAVFAKKVLEKL >gi|343385196|ref|AEM20686.1| hypothetical protein, complement(50930..51487) [Brachyspira intermedia PWS/A] MKKLGLKAFIFNLIMAANLYCFDLIDDVDDFIEDIIKLILMVVVILAVIYFIKKVLKDDNTSGKIRKSNRDDDYRKPSRRRKMRRRDDYYYDDDYEDDYDNRMRSNRDYDYYEDDYRNERNNRRERIKEEDMRYEYDMRDYDRRERRLPNNVKSNIDSRENDPRYEKVYELKPEYKLKDDKKRIR >gi|343385197|ref|AEM20687.1| hypothetical protein, complement(51521..51712) [Brachyspira intermedia PWS/A] MALVSAFIMTANLYSFDLIEDTFDFIFDDLAKIIGIVVIIAACVYIFKKYVKKIIILMTDNKR >gi|343385198|ref|AEM20688.1| extracellular solute-binding protein, family 5, 52068..53642 [Brachyspira intermedia PWS/A] MLLFIACGGKKNEEGAIYINVGPEPKTIDPALNSTVDANIYIQHVFEGLATRDKDNKIVPGVAESWDISEDGLTYTFHIRDNAKWSDGKKITADDFVYAWQRVVDPVTASEYAYQFEPVLNAMDINSGKKPVSELGIKAIDEKTLEVKLNAPTAYFLELVAFYTFYPVRKDMIEENGDNWTLSPETYIGNGPFIMTERRTDDRIVVEKNTNYWNVNNIVPEKLVFILMQNGTAAVAGIKEGSLHFANNPPLQDIENLKSEGLMHISPYLGTYYYCLNITNDILKDARVRKALTLAIDRNYLVEQVTRAGQLPASAWVPSGVNDVEGADGDFRKVGGDYYSIKPEDYQKNLEEAKQLLADAGYPNGENFPVIEFKSNSGEHIQIFEAVQQMWKEGLGIDSTIAQEEWATFQTTRQEKNYVIARHGWIADYNDPMSFLGVFLSYSIQNNGGYSNKAYDDKLKLAMSTIDQDIRMKAMHEAEDILMEDMGLIPLYFYTDPIMVSKKLSDVIYDPLGAHKFYYAKLAK >gi|343385199|ref|AEM20689.1| hypothetical protein, 53801..54118 [Brachyspira intermedia PWS/A] MLLKDRNGLYRGKATIKNFLSFDIDIEALVDEKGDIKVTTIAPIVGKISHSISLGSDYDKDDYDMKFGEDIFHIKFDSNNSIEIELPEKISGSLIVTRNVVLNRV >gi|343385200|ref|AEM20690.1| ferredoxin, 54552..55379 [Brachyspira intermedia PWS/A] MKVDKVYSIYYSATGTTQKIVSYIGENIAKKLNVEFEKYNFTLPKKREGVLEFKENDLVICGTPTYAGRIPNVMLPYYKNNIKANGALAIPVVLYGNRNFDDSLIELRNTMQENGFYTIAGAGFIGEHAFSYVLGAGRPDDKDMAIAAEFVDKVVEKIQNMTDIPKEPIKVRGNDPIRPYYMPKDKNEHAIDILKVKPKVDTSKCTNCKTCAHVCPLASIDFNDITQYVGKCIKCGACIKKCPEHCRYYDDEGFLYHQHDLEDEFKRRAEPELFY >gi|343385201|ref|AEM20691.1| Formamidopyrimidine-D glycolase, complement(55465..56169) [Brachyspira intermedia PWS/A] MLKYKVNIILLGRLEVMKELPNLITLINSIKGEICYSYINKIVAIDKQYKEMEDIEGQKIIDVLRYGGYMHFQFSQDAMLVDLGPNGSFVLTEDDDYENSILKLETDHGNFFVVDDSKDKNEITKIIPIWKDSTTMPQIGYDPLTKQFNYNLFCQLLADNDTTVEKLIKNPLILSGIGNVYGDMILKKASITKKTKTSDVTKVKAREIFDAIKQVLREASGNTEEDDGDSSEEE >gi|343385202|ref|AEM20692.1| adenylosuccinate synthase, complement(56703..57986) [Brachyspira intermedia PWS/A] MASVIIVGTQWGDEGKGKIVDYLAENCEYVVRSQGGSNAGHTVVVDNVKYKLRLLPSGILHKDKVCVIGNGVVIEPKVFLSEIDSLIEKKVNISNLKISDRAHVLMPYHKILDELQEEDLGENKLGTTKNGIGPCYMDKSSRLGIRIVDLMNKETFAKKLKFNVELKNKLLKKLYNHEGVNYDDLLKEYLEYADRLRPFVADTTTILNKAIKEKKNILFEGAQATMLDLDHGTYPFVTSSYPAAGGACTGSGVGPRKIDNVIGVVKAYSTRVGEGPFPSELFDDVGQLIRDRGGEYGTVTGRARRCGWLDACVVKYASYVNGLDSIAITRLDILDELDKLKICVAYKYNGEILEGYPADLEVLSKAEPVYEEFEGWKTSTRDIREYDKLPENAKKYLKRLSEVIETDISIVSVGAGRDETIIVKKIF >gi|343385203|ref|AEM20693.1| hypothetical protein, 58499..58732 [Brachyspira intermedia PWS/A] MNKTIEAFKDDIHGSLKLREKILLNIKLKTEMILNQVELYFNFEKENIELVYFVLDSDYPNVIINFNELKDIINSLR >gi|343385204|ref|AEM20694.1| TPR domain-containing protein, 59232..59633 [Brachyspira intermedia PWS/A] MTEELRTRIEKLIEEKHFEEAIKLCDEAIEKYDKDEDAYFLKANCYFELEDYNAAIENLNKVIELNPNSEKAYFNRAISKAKSEMYEEAIKDYDKAIELNSNDEVYYINRGVSKSNLERYVSNTSNRPSHNSE >gi|343385205|ref|AEM20695.1| hypothetical protein, 59831..60208 [Brachyspira intermedia PWS/A] MEEHKNHEILGKELLDKLNIKVPEDDNNEEEILLYDNLVGHIKILFDNECIDNDFNNKENKYGFTYLLSTNFPLINGAYRITAKGYDFLSGLREDKVFSKIKDFSINVAIETAKQLLVKLALGNL >gi|343385206|ref|AEM20696.1| membrane-fusion protein, complement(60213..61208) [Brachyspira intermedia PWS/A] MDVNDIAGIGKAVEKFIDLLRGLGWKIYEPLHIKRIADVESYKRKLETDDKIYEIEKISEFITKNSNLNINHNNNGTEISNANILLENTKARLVNQELSRTSNIQNVISKTYDILKDEEDVSDKPVDKDWFTRYFNIVQDISNEDIQNLWAKLLAGEIKQPGSFSYRTLETLKNMTTDEAELFTKVAKFFIFDGQKNCYIFNDHDLLKRYGVIHYYIVTLIDIGLINSSLNTGIIVNNNLTMLNNNLIFSIYNNMGMVQIPILTVSKTGNEILKLIDNKCNSDQFFIDSIKIIKNMFGQNVRYTLHKIDYIDDKGIIHTIDDNEDLMKNIQ >gi|343385207|ref|AEM20697.1| glycoside hydrolase family 19, 61353..61964 [Brachyspira intermedia PWS/A] MLTKDILKKSGINQKWYEVLSKSFDEYNICKSDNKEENINELAMFLAQCGHESINFTKLEENLNYSANTLLKIFPKYFKDIDEAKEVVSKGKEAIANRIYGGRLGNSKNEGYKYRGRGIIQLTGKNNYKKYGEKLGINLVDNPDLASSELIASNIACCYWIERGLQPFARKGDVKTVTKMINGGYNGLEDREKRFDKILKILR >gi|343385208|ref|AEM20698.1| hypothetical protein, 61978..62394 [Brachyspira intermedia PWS/A] MKMPRTTISDLDKRTASICHRIGINEDGSSNGNGLINTMKEIKEQLDSHEKYLDNLSEDMVKIDYRLEKLESLAKVNNEEQQKIINEMKEIKKNIDDSITSTKIKKAANFILLLAGVTTAFGTILGTIYFFTNHFIGK >gi|343385209|ref|AEM20699.1| hypothetical protein, 62396..62689 [Brachyspira intermedia PWS/A] MKKLFGFLDAKGLGKKTSWFTSIGAFAFGIIMTSFIMITQKRFPNYNESIAIVIIMWGASLVTGTTDLSIIINNFFKAKYNYKENYKENDSNNQHNN >gi|343385210|ref|AEM20700.1| hypothetical protein, 62718..63038 [Brachyspira intermedia PWS/A] MKSKYFIYFLIAGILLGYISFLNCTIKIKNKKIKSLEKEIYTTKLKISNIILEKEIIFYNERKIMLESFRNSNEAIENIKESYLKSDEINALNAIINNYYRNIQKE >gi|343385211|ref|AEM20701.1| hypothetical protein, 63042..63440 [Brachyspira intermedia PWS/A] MIKKIISEIWEKIKKYRAAIIMYLVMLAVSIVSDIFFGGFNILKYISYAVLLTIFIIIMIIYKDKIKETIDNLEDKIDSCINKQYLLDKGNNREELIYNLSNLQEEIKKDIVNNLDNINNPKIEVKITDEKN >gi|343385212|ref|AEM20702.1| hypothetical protein, 63454..63588 [Brachyspira intermedia PWS/A] MVIFLVSCTAKYITIPLSQPPSFYKPNNNINTSKELIKEYQKVL >gi|343385213|ref|AEM20703.1| hypothetical protein, 63661..64233 [Brachyspira intermedia PWS/A] MAPKSNIDKLDKKTKEEIIELLQDSTVRYIDIANIINEKLGKKAVSKSGISRYKKRFDNLLDKKKEIEAIASAWKDKTGDELGNILGKQTMEEIRMLIYDFVGSLQEIQNSEVANMDIKEIEKMSNSIEKATKGIINLENAISKNNQHTEEIKNKALQEAQIKAINNANSAGISQETVNTIFRDVFNINN >gi|343385214|ref|AEM20704.1| portal protein, putative, 64236..64904 [Brachyspira intermedia PWS/A] MNNKVKNKKILLPYQEKWIINQDKVKVWEKSRRIGASYVEALNCVLKASLSKKENGMSCYYISYAKDMTQQFIKDAAFWAKLLNIACEDFGETVIKDENKDITIYKIRFESGFEIWGLPSVPRSIRSKQGHIVIDEAAFCDDLKELLKAALAMLMWGGSVSILSTHNGEDNQFNLLVKDIESGRKDYYLQTTDIDEALRDGLYKKYVKYLKKNTVKVKNKNG >gi|343385215|ref|AEM20705.1| putative phage protein, 65027..65701 [Brachyspira intermedia PWS/A] MYRFYEKDDFTFKTENERYAKMLEYFNIVKHLFTNIKDEVVLGEDFARSGDLTVLWFEKIKLSKNKTKTLCVIELRNIPFSNQEQFILLCINELGRKFLGAAFDARGNGQMIAENLSLAYRGLILEVMITRKWYAENMPKLKSAVEDKTTNIPKDNFIIDDFLQAEVWQGIPLIRERTGIRGNKRHGDSLIAKVMAIYAINELELNIYQKITYEPVKTQNCWRT >gi|343385216|ref|AEM20706.1| putative phage protein, 65806..67407 [Brachyspira intermedia PWS/A] MNIKETIKKIFFNKEKIKYNPPCLSEIAYSVPYSNRSEWSDFSLIQSLSPSVLANIFNDVKSGYSNKEYLELASDMELKDSHYRSVLNTRKLSILSLDIKINAGSEDKKDIEIAKSAERDILYNKTAGIYSLIFNMLDAVSKGFSVNEIIWQSENSIWKPYQYKYRDARFFKYDYINSSKLKLIDPYNSTQLYDLIENKFIIHEPKNFSGLQVLSGLAMPALFLFMLKYYDITSWAAFIDRFGYPIRIGKYGHKATEEDILTLKRAVSSIGSDFGAVIPESAILEIIESKTTQSTSDTYQKLAEFINKEISKLVLGQTMTTEDGASYSQANVHNQVREDILKADIKQIEETLNQQLIIPYCRFNFGELENYPKLELFKPDVKNIELIINAVNNLSSKGLKVKAKEIREMLGLSEPEEQDEIIGGIDETIKDNGKEDFEKNNYELNSAVLNNDISEDEYKDDYIAIEDDIINVLEKTLNKCKDFEELKKELEELTLNWNPKKQAELMAAAFFMARAKGDNDFDGEAHSVKDTNL >gi|343385217|ref|AEM20707.1| putative F protein, 67544..68794 [Brachyspira intermedia PWS/A] MKESIEKAIENGETLEQFKKNLLPILYQKGWIGKQLIEDPITKEIKEVYIDTPSRLKTIYETNLRSAYMKGRFDRAYNSTLHPYLMYRIGPSKNHRKEHLEWDGLILDKNDPFWLSHNPPNGWGCKCYTVAISKARKEKYEKEGIPTADGDGQTKKIKVKTQRPKIEYTTYINKRNGTISKVPKGVDPAFNFNQGNYNRDLVLFNDFMKKVQDKFPSQYQNIAETILRSEIKKEQFENWIKGAFEYDSDNPQNASVATGGTQGGQTPQSSNPKSITAIGFIDSAVKNYLKNQNIDIGESITIGLEARLLRRSPQRDSIKAKRHAKKNEALEAKDAEYIIKCILEGQVYFQTDNKYIIYLYKIEDDKYLQISIATEINFSGRNSGITIPAVRNIQFINETQKKSKYDADTKKWIKIR >gi|343385218|ref|AEM20708.1| hypothetical membrane-spanning protein, 69304..69513 [Brachyspira intermedia PWS/A] MKLIKILLISLIITSSIFAQANTVYISDKGKKYHRENCRTLRGNKYPISIQEAKERGYTACKVCKPPIN >gi|343385219|ref|AEM20709.1| hypothetical protein, complement(69510..70172) [Brachyspira intermedia PWS/A] MKNNKSFIIIIIFAALGAYLGTSFYKSNNNNPKDKVNSKNEIIGIWKNKNTGFVYNYQNETLIISDNNDDIFLILKYMITNSSLIGIDSNNDFYSNAMLISKNKNKLALINDEGKVIYDKVNSEELKYNIVKNEKEVVGLWVNELESISYGYSFFDDGSVVMLIGSKPVNTVFKYYISNDIFYTVKDNKAHTEGFPLILLKNQLYMFGDAKKPLIKMMDN >gi|343385220|ref|AEM20710.1| Putative phage repressor, complement(70183..70998) [Brachyspira intermedia PWS/A] MFIIFLLKKVIKYTFTKVFTNIMLKIGDRIREFRKKLNISQEEISKILGTNQKSYSRYENNLTYPPTEILEKLAEVYNFNLHWLITGQGEMFIKNNIDSSENKKYTVNEFKSEYDIDKELENINGEWIAKSSKYILEDSSSMLETGQKNLNLIKVINGDMNSADAIQIPNELKKYEGKLIAIIQKGDDMEPIIRDSSIVLCDTLGFQGAGLYVLKLNNIYMIKRISLKLDNYLLSPDNKLYESFEVPLNSDKLKIGGKVRFVANVFIKNIF >gi|343385221|ref|AEM20711.1| hypothetical protein, 71134..71382 [Brachyspira intermedia PWS/A] MSNYISKQVGKYISYKLKLKGITHNDIAKSANLSTAIITHVLNGRKSSQKAKKAIAAALGYTDFRILEYEAVKAVNDELNKK >gi|343385222|ref|AEM20712.1| hypothetical protein, 71440..71790 [Brachyspira intermedia PWS/A] MKKLEYGLIANRHNMPVNDFIFNRIKDPTKIRNIEAEAYRKIKTIANDCKEEKYIKLDLYVTGLSAALISVIKACKKVHREDFINIKLVLKHYSWKNKNYHNQTIFFINKLINGGK >gi|343385223|ref|AEM20713.1| putative sulfate transport protein CysZ, 71790..72407 [Brachyspira intermedia PWS/A] MDNNFDESKFMKNAQGAFIPIENVKPVDKLRDDLVKNLMSKTKKVQKIIEDHRNICWEDIKAFLEISASEHNVKYGGEKGNITLLSYDGKYKVVIANQDYISFNEKLQIAKDLIDECIRKWAKGADKNLLALVNDAFKVDKQGKISTEKILGLRRLEINDFTWNEAMKAITESITVEDSKRYIRFYERRDKDGKYEHISLSPQSL >gi|343385224|ref|AEM20714.1| hypothetical protein, 72494..72673 [Brachyspira intermedia PWS/A] MEKEKAKAINARNKQREILDEAGSRAKRTTANARVSILWESVHEIEADIQLLENMIKEI >gi|343385225|ref|AEM20715.1| hypothetical protein, 72698..72982 [Brachyspira intermedia PWS/A] MTEYNSQERICAIIELLAKSFPRALKTKELANILKTKEANISRDIKVFEKFDFISKNENGIRLSRKFASISEEMKRGYDTAIAKLQEEKKEYFN >gi|343385226|ref|AEM20716.1| hypothetical protein, 73015..73557 [Brachyspira intermedia PWS/A] MLYKDKNGSYTSDYLLDGEFTREMDNNFKKSKKPSADSCETIGDQYEACSDKYEKVFDNYNLDNEDRDFYACTPAVWGDNCQNKDDDCPPVAIDNFVDKLFSNDPFEESSLDLENEEYEGFDPTTVASAHLACRLWREKLDKDNPFIQYEMEDNKVIADLNELREITKNTFEKFKNKIIK >gi|343385227|ref|AEM20717.1| phage-like protein, 73640..74569 [Brachyspira intermedia PWS/A] MSRKKITEEQSNDTNIIDTAIEIENKERISKEITIEEVEKTYFTDTYDYSRVVEEIKFYQEQAGNAFIEMGKRLLRIKAHEEHGMFMLALEELNIASRTASYAMVAARRFSNSQSIANLGTTKMIALTVLEDEEVKELEDTNQIFGMTFDEIDKMSVRELKKNLREAKEKNKQDREALENVIKQKEEKNNELERQIRGLDPISAERLAQEKCEEISKDFLKKIASIEMDFFSLKQMMNAVQSIEGINLVIIEEFQERFSNAFANLEKERQNFYDIYDNPHVYSREEQLELGIIKNYGDNMKDEKRYYID >gi|343385228|ref|AEM20718.1| Integrase catalytic region, 74721..76445 [Brachyspira intermedia PWS/A] MNEWVLKMQEAKTAKERKKIVEEYSRIIGRSVSFCYKELKKNGYDSKRAKRKDIGKKNIDDNTIKIVASLVKTGIRENGKKTMPVNVALDMLKRNGYDINIKTSRMREILKDSKIDADRLKKDSHNIRLRSEYPNQVHQVDPSVALIYFAPESEDGKSKMKIIEDSEYYKNKDFFNDAKDKKGKKIRRKKCLRYVLTDHYSGSICLRYYAAYGETAEYLYDFLLYAWSKKEREDYAFHGVPEILVWDKGSANTSKSVANALRSLKVKTIAHSTGNSRAKGQVENANNLIETHFECLFRLEAISSIEELNEAAERFCVEYNTKMKIKRMGQIINSRYLLWQKITLEQLRELPDIEVCKQIFSAGVLKRKVKSDLTISMYHAKAKRTLYYSLINLGVEKGDEINAQAVLFGDKYKAIIWFNRKNEYGESEELSYEIEPIEIDEAGFDINAAVIGKEYKQTKLTENENDIKEIENISEEIKRQEILKSHSLIQPDIKFIYQKEGEKINLDKNDNDSREILLSYVEVMEKVKSGLGYVPDDLAEELKKDYPNGVEYGYVDEIIRFWKNKEDKENENII >gi|343385229|ref|AEM20719.1| type II secretory pathway, component ExeA, 76727..77587 [Brachyspira intermedia PWS/A] MAINIKAFRKFGFKHDPFFGDIEKMEDVYLNGDMRFMTEFICQTAKQGGMVALIGESGSGKTTLRRYAIDTMEKENQRVKIIQCKIIDKTRLSVGAICDSIILDVSSESPKKSLEAKARQVERILTNSSRMGFAHVLIIEEAHDLSIATLKYLKRFWELEDGLKKLLSILLIGQTELAGKLDESKNYEAREIIRRMELLKIEPLSDPKDIKTYLQLKFAKAGVNIDDIITDKGIEAISSKLSSKLLKGTTISKAYPLSINNLMRRAINKAYDLKINKIDEHLIMSL >gi|343385230|ref|AEM20720.1| hypothetical protein, 77618..77773 [Brachyspira intermedia PWS/A] MDKNKYKTLAIGIDKEIYAELDKYCKEKSITKSQFMRKIVNNILKRIIKNI >gi|343385231|ref|AEM20721.1| hypothetical protein, 78386..78727 [Brachyspira intermedia PWS/A] MTVEELKEVLNSMNVAGAFACQRHASRGGTQGASSKNQKNENDKHFYVTYQDTKYLTEKQVKFIKGLWWKKSNNPSENTLKVFIKRITGKNSLSECGHKEANILITAIQEIKK >gi|343385232|ref|AEM20722.1| hypothetical protein, 78735..79205 [Brachyspira intermedia PWS/A] MNNDFINSIKDSLLEAGISEELMIKTLRCFCRKYGGQKVYFSSSAESKRSNEIFNLIYDELDEENGKVEYGTSEKITRIFLENFYNISEYVPLEIKYFRKEIAAEILDEYNKSKDKNKTQFEICSKYNITFATFIKLKNQALKNIKIKSKPSKNLF >gi|343385233|ref|AEM20723.1| putative Mu-like prophage I protein, 79377..80378 [Brachyspira intermedia PWS/A] MDMKETVNAFELDYNKTIPKEIELIPSEEIFTGFDGRVFKARDKQAIISKTNSKLKYVVIDENHRIDYTAGTGQSTEAMGWMHDFFVKEDNSVWALVEWTESGSAKIKSKEYKYISPVYEVDKSGNIISILRAAITNNPNLRLTALNNKQNEFAESQLLGENSNKGDNMSKEINNALGINESASDSEAVNAINKTKNEIESLKLELNNERENKKSLIEKNTNLEKALNEVNKEFAELKKVNLEKDAQAAVEKAINDGKIAPSTKDVYLSLCMEDGGIEKFNKIMENTPKAGLFGETNIPNKTDNVSLNEADEEVARAMGYTKEEMLEMKKNEK >gi|343385234|ref|AEM20724.1| putative major head subunit, 80415..81326 [Brachyspira intermedia PWS/A] MPVTVDSKLQSLKTVIKHEFNNAYGKLSPDSFCNKVCTQIASNSASNTYDLLGDFPEFKEWTSARQVKDMKEHSYTVSNKNYEATLGVKRMDLENDNIGTYRIKAARQAEAAIEFFNQSAADLLKNGESALCYDGQNFFDSDHPVYENSDGTGSNTPTSNIYGAGSSAAWYLLDLSKSLKPFIFQQREALKMEAITNPNSEYVFTNDAYMFGSSWRGAFCYGFWQQALISKEDLTAENFEKAYAQMRKVTKDGGRKMGIRATHIVIPPDLQSKAEGIFNVANNAAGAGNINYKKVEIIVCDWL >gi|343385235|ref|AEM20725.1| hypothetical protein, 81345..81656 [Brachyspira intermedia PWS/A] MPKTKQNDIENKEDQGTENTNMNNKDEINDLQQDNTKQADLPDTESDNKSEKIKVFVKCNTGNNSYYRAGIKFFNVFREYQITKEVLKILKKDKHLIITDTLD >gi|343385236|ref|AEM20726.1| hypothetical protein, 81781..82215 [Brachyspira intermedia PWS/A] MKSLISYEEFASRYSQDVLPELKDEGEPKEHVLQAINDATGIIVSHLFWIIDKEINDITENIPIQFESVLKTICCDIAFLRINDKVSSDEDSREKYKNAMNMLEKIDKEYRGLSGPNLQSSFIVDEKTDKDLFDNRFFKKGEFI >gi|343385237|ref|AEM20727.1| putative phage virion morphogenesis protein, 82218..82682 [Brachyspira intermedia PWS/A] MSAEVFITDIEEIKKLQDKLKSLKLSSSEERDILEAIGTEIKTQIEERFENQRDVSGNKWQDISQKTREYYNKKGIVGSILSRTRQLRDTIESQVNNSQLLTGATKVYAAVHNFGDDSRNIPQREFLGLSSDNYADIENIINEFLENSIKKANN >gi|343385238|ref|AEM20728.1| hypothetical protein, 82705..83238 [Brachyspira intermedia PWS/A] MTYLDIRNNVENQIKKYFEDRKIKINVEASAGALNIDEIKRIFIKAPSIFVSMANINVEKEYIRFVNYVVVRANQKDKIYDSGLEITGALIACIKNIDSGSWGYDSKNISADCLYSGELDKINACLWGISWDLNVRSINIDGDINDVSGLDDFEGYDAEHKVEDKTAEDIVNIKDNS >gi|343385239|ref|AEM20729.1| putative phage protein, 83298..84794 [Brachyspira intermedia PWS/A] MSTINFSQIPDSLLVPGQYQEVDNSLAGTRTEIKRILLVGPFLATGTAKNGVIERITSTIKAGEKFGYGSILSVMCEQFLSVNKNDELYALPITDNGTAYSKTYKIALTEANQTGNIKITVNTTEINISVVKEDTAETIAGKIAASVNTMFNFFMNAVSGESANEDATWNITFNALNKGDYGIILNIESDNSKITFAEDSKTDAADSPVSDWKVYFDAIGETRYNYIINAFNDENTLKKFAEELESRYSATRQIGGRMFAYLKGEIGNTSENDSIVGKASKVNSPHICFIPIVQTSSSINTNEFPIIFLTKIAAAAITELINDPSSNTLGLEVAGITTNKSLLFEERQNLLTGGVATYNTDAQGNVLIERLVTSYTTNSEGARDTSYLDIQIVETIDAIRTYINNEAKTRFKGWKLSSTNEDFGAGAKVMNAEVWTSFLCELYQSVFMEERAWTQDFQSYKESITAQVKSGTKTWLEYVHKPILIGQFYIGAGLNQFK >gi|343385240|ref|AEM20730.1| hypothetical protein, 84838..85191 [Brachyspira intermedia PWS/A] MELFKVYKVTSRLLGDLPLQANGTTFSPQSYSRETKIGETPNATGYVETNTVAELKLKLNAVLDPGVFSGVKNDTLTIYFKNGMVYMMANAWVTDKVELGQGEYEVTYNSKFSEKIK >gi|343385241|ref|AEM20731.1| hypothetical protein, 85211..85684 [Brachyspira intermedia PWS/A] MNNEIVINLKYPITQGERTVTSLILPKNVLVRHIMAGDPYPQNTVSREVAMLSAMTGEPEIILQNMEITDWVICQAKLNELINNSISNTEEKDNKKNDEYVEEDYIDIINIFRTLILEVMIMSKGLSYDNLINMTIKEFLKWHKESLRIYKVIKGIF >gi|343385242|ref|AEM20732.1| putative phage protein, 85801..87408 [Brachyspira intermedia PWS/A] MSNITAGVLIKLKDQFSSGIDKASNKVNSFQSKMQGAFSAIGAYSAKIDGILNSTASNLATLGVSIGVGATINKMIAFEDRINKIGTVAKMNAKDIETAKRQMEGLSEAIYKAAMQSDVKIDANEIIDAMDQIMEKTGDMDFARANIDNIAKSIRAFNATGTDIGSLLSEFSKLGYTSEETSKLLDELYSQGNKGAFVAKDFASLGASIISAYSVIGTAPEDIKNVGASMQVLRQAVGSSDEAVTRLEAVMSELANPETQYALEQLGASLGKDFSVTDSNGKMKDLNTIMMQIVNAQKELGNGWGALRENKVFGSDMVYEALNAYKNYGSSLEKYLDLEDAKGMRDKAAAENAKSLAANIQNLQTAFDSFANKNVAPYLEKVTGILNNFAKNPERFDAVFKVIAAGFGIFMTAKLVSGVANTISSINSLKNMAKGNISSTLQADSRHIQGTGTPIPVFVTNMGQFFSNGNNSNTFKAGQSSSNIPNINNGKMTWKSLGKTAGAGAMGAAVTAIPMAISGFMAANDPSLSKKNKIK >gi|343385243|ref|AEM20733.1| hypothetical protein, 87405..87833 [Brachyspira intermedia PWS/A] MKGEAVGGAVGSIAGTAIGASAGAATSAAIGAAIGSVVPGLGTAIGALVGAGVGIAGGYLGSKLGGKIGESLTKEDTLEKTITANNIQNNNAQVEMKGAANIGVDIKLTDERTYYKATPYNNNIPNINIQTGNINEIRNMAY >gi|343385244|ref|AEM20734.1| hypothetical protein, 87834..88790 [Brachyspira intermedia PWS/A] MENTSNLKYPSSSSWREAYEIQSLVKYEAPNIEAVYFLYDNINISGGQSLDNSSYPNFGYWSNTSINESVNKIRVSGFLRDEEYLNKKIDLINAFKIKTDDENPAFIFLPLYPRLKVTLENWSIDEKANENGQCKIELNFNLCAETSVRLWRRKNDENYNFLNIEDAKNNVQEIANKNLEKKLENNFNYDTFLSGINNVSSKLSNVIGMIQGKADYINDMARAINTISSTIAQGIRTPSVFADALQNVVSSIVNGIIDIKQSVNETAESSKSFAAGGQSSINSILPIENAKNNEKKFYFSFLIFIIMILQKIQFLLMK >gi|343385245|ref|AEM20735.1| hypothetical protein, 88787..89146 [Brachyspira intermedia PWS/A] MNTAKESDNFIKIIAVTAVASIIIQIDDSKEKIKNYLELYDKLNDSINKDDYELNNALIDLKISVIEELKIKELKKLRKIKFNKNMTLLNAEHFLNSYNLRDFNFIEDSFVLPKEIFYV >gi|343385246|ref|AEM20736.1| hypothetical protein, 89272..90291 [Brachyspira intermedia PWS/A] MHIKVYAGKNKRLINYNSIIIKKSIDEICNTADIVCPLSELKKVEKHDRIIIKALMWNNDERNVTTTLVDDISAVLNNNQKQMTIHSRSYARDIIDSTDSGRIEGGTLVEVVRKIAQKYNSNIVVSHYPTNKDNSPPIASFTWENESVWQKLLTIAENNGYAIASNQQSGLYVWDKKQYLSSIPNHSLKENWNIKSAVLDKKGYEQFNCYKIKGNYGVGEKFDDKCDTKRVFTLFFTDENISQQELLNRAESELKRRKSDELNINVYGWGLPEKEIEKLQIRNKSEQEVFYEPNQLIKVNIPSFGIDNYKVIKSVELILNNEEYSSNIILVDKGAKNEY >gi|343385247|ref|AEM20737.1| hypothetical protein, 90281..90847 [Brachyspira intermedia PWS/A] MNINNFISSISSKIANMITISKFIKRNNDDTIQVKSSYDKTIEKKELFPYGFIAKAKEGEVIILSKGGNFDSSQILPILSSDKAPEIKEGDTCIYNEKISIIINEDMIKIGGDDFGGLIKIEELKKELEKNNQILKAILNICLGAPIPEAGNGANSAFQLALSTALAGKTIANFGNIENTKIVHGANN >gi|343385248|ref|AEM20738.1| hypothetical protein, 90849..91172 [Brachyspira intermedia PWS/A] MLEIDLNKYNNIEYLVSMSIYSNKNKWWADNYFGSDLFAKKDKLSKETQNEVKRIITDSIEWIVEDGLAKDIEVDTEIENKSRLNYSVLVRKPDNNTEIIKGVWNNE >gi|343385249|ref|AEM20739.1| putative phage protein, 91165..92211 [Brachyspira intermedia PWS/A] MNESLEQLKAKILNQYYSELNPLENTPKYNLVKVIANVEAGIQYSLLGDIEFLKKQIFPDTAEKDFLRAHWADRVPPLYAEVASGSILIEGIPGVSIPAGCVFSSNIGNTYFNSKSYIIENDGSIEIEVQAQNAGSSYNLKKDSKLSLTSNLISNVSSEAVVKKDIEGGTDGETDENYLLRVLNYVKSSLNGKSGDFAAWALNASSEVSKAWEFKNFNIFGALLIVVLGGNSETGFYKISNIERIQTYIENVAPPIIFTVKALDLIYINLTIDLLPLEDTMINRKYCENTIKEYFLEKAKPDMFINTSTLRDLIVDGVSISNASVTIEDGDKYISQLQFPVLGSILWV >gi|343385250|ref|AEM20740.1| hypothetical protein, 92202..93290 [Brachyspira intermedia PWS/A] MGLIASKEQYFEAVKSLYPEGLFFERQFENKDSDIYKLVKVQSEMIYNLKKELNKLWLESRLETCTEDTIEDYERILSGILRPDLTLEERKTILLIQNKNKLNIDSLNTIINKYYSANIIKIDEKIKPSVFGFSRFGNDRIFNYRAFCIIMIYLTIEDPSKKQELEKFLDTIFMANKIIIYNYILPSIEEITVDYINKIIKNYISGCTVQKIEKDFEQSLFAHSKFGRTRIFNYMHSNSIIIYVTLAGKRKRALFEDIFYTIFSINTDKTIFFVYVIPAEIDLNDLNKNIEKYDAHILKSFNYFESSELGDLKTGQIRILNYINHRTIIFYVQLNNQNQKDNFESYIRSIYPENIVFFEYIN >gi|343385251|ref|AEM20741.1| putative Hvp 101 VSH-1 tail protein, 93302..93979 [Brachyspira intermedia PWS/A] MSGLYPVDQDINIFGEIIKFPSMGSDGKFTNGDFTDPKKPASFIPAETINLIIDNLNNLIKYCGLEPNNTSETQLKEAIDKLILNKSCPIGSTYIQFAEDDGTFDASKSPEKLFGGTWQLKYNTESVFFRTEGSLSEEGRSNGIQQDAMQKLTGTIHTYNTQNHKIIMDGTGCFSIESGGGYGSNSDTGLLQVSQGVKFDNSKRARTSTENRTKNRKIRIYKRIA >gi|343385252|ref|AEM20742.1| Hvp 28 VSH-1 tail protein, 94000..94641 [Brachyspira intermedia PWS/A] MNIVIFNNNKIKEIISTDENTEIAIKKLKNQGFIGDNDEYKVFDNVQNMGVKDIRAIKNDGSVMSIEEQIENKILVLEKDEEIRNGQIYKLDKNIQEDLIKLIELGIEKLEPTQKIEISEDGTKYIIEKSMEEKLRENLITQEEYDNYIIQIRQMQYQTNLDGARAELLDSVLSNLSNQGLLTEEQKTQLDMLNNKRIEIKESNPKSDILLNA >gi|343385253|ref|AEM20743.1| hypothetical protein, complement(94697..95002) [Brachyspira intermedia PWS/A] MLTFGSLSEESRSNGIQGDAIRNITGNFDSYHNNNGNHNNWKNSPFSFSYFTSPPSGFNPSGANNGILTHININFNASKVVTTASENRTKNRKIRVYKRIA >gi|343385254|ref|AEM20744.1| hypothetical protein, complement(95260..95739) [Brachyspira intermedia PWS/A] MEIIGTIFIGVFTSIIGTILINLCSSIILRRRQKLKYIETVKKANNEIIEILKPYISEKGLPKEEIILSIISSISRKYEVNENDLYSINIFCQELIKGIIDNVYVSSDKKEEYAEELVKYLENLNSNFIDNQKIEKYNKLNEKNLYQLKILLVLYYHLY >gi|343385255|ref|AEM20745.1| TPR domain-containing protein, 95814..97958 [Brachyspira intermedia PWS/A] MVFGSFFVGVIRYEEAIEDFNRAIKLDPNNSDAYLNRGISKSDLGNDKEAIEDFNRAIELEPDNSDAYLNRGISKSDLGNDKEAIEDYNKSIELNPYNEEGYIYRGLSKSNLKRYREAIKDYNKAIELVPNDSEVYLNRGASKGYLKEYESSINDFNKAIELNPNDEHIYFNRGISKFDLKRYREAIEDYNKAIKLNPNYIDAYINRGASKFDLKRYREAIEDFNKAIELNPNANDVYFNLGLSNFNLKKYADVIENFNKVIELNPNYKDAYFLRGICKIYLNNENAIEDFRSFFKINEDNNIYIITILQLFEEYENIEKLFKFIVDIKNNELWENEPITNLISRFDESKNFDDELIKNIKYLLLYEYFLLKILTFDTEEENDIEISHYTSLDILPLLLNVKGNTKESGNIRINNITTANDPKEGKILERILNKNNIDIKIENDEKALTLQTSYSRNKDSLTMFRLYGKKENKEATGICLVLDNKYFNNTYTSPYSYEFKLKIENNKIEMNEKINKEKFQENKRNLYWMLYYNEKENQLIYNKEKSKYAINIIDLNDLNNPNYKAELKEDDKKEDMIKYAFAKIFYYTEEIKKQIEGNEIYKNIKNQLYSYLFENIKYIIKHEAFFEEQELRMLVTNDYKSDEILIDNDNKKLYIDYIKLFDEKSNYIKEIIIGSKVENNEAVAEYIRKVLHSKNTEMNKLDDIKVSISEAPLR >gi|343385256|ref|AEM20746.1| hypothetical protein, complement(97983..98468) [Brachyspira intermedia PWS/A] MEKSKAIADAVLIPSLAIAQSALGVAASFAQGGPAGFAAGLIISATAISSAISAASGIMSSANALDAIKSNPPQAPQFAFGTTGYTIPDGGSAIVGEMGAELVSNKSGRITVQSNAQLKEQNYSKGDIWNVTINVEQALNPDEVYRLMNSYKARNSQMYSR >gi|343385257|ref|AEM20747.1| hypothetical protein, 98877..99110 [Brachyspira intermedia PWS/A] MLEIESFTPSVKFFILILLMLSSREFIDDDVLSIALFASSAEIVKSLNLFAESLKNKEDSNDEFIFLCCFLYFVILY >gi|343385258|ref|AEM20748.1| hypothetical protein, complement(99191..100783) [Brachyspira intermedia PWS/A] MMKKMPYHFLRNKIYKLPPAPYINFEEFGTYIKINGNIYSENAYNTYSSYEFKVNKRGGDVSKVSFSTPLNYFNINDKVEYYLNGKKRFAGYVESIDNAGLNLSIIPIWGKLLHQYIQGDLILESTKGALDIVLSLREKIEEMNIIFDEKNITLNNDKQITMSFSGKNISDILDEVEENLSDTWCWGVDFEGYFYFKEFSDIPTKKLNWHNNDFSDSEYEEDSADLVSRYIIKMKDTLTDDEGNEEEVYRTLPKIVGADKLYPQIPLEKEIGIKTDIFEIEYKLENYDLAYKLAYQFLTNQTKKEIVKIKTLNSKNYDLNINECIECILKPTNNFYQIIDFNDFTETESRLNEVYSSDIIDIDSSLEYRKYPNYKQQQSVTLTDIDRYYKQICNQSYNITKIVIFFSDGIQNEEKNKNVSAVFQIEDKEHFQRKYFTNGFGVFDVRGYDKRNIIITSERGNILYDKFICFFDIGSRVVDMNVRTIDYKFEKNALNINLELAKMNINLTNYLYNQEERRKNLERILNSSGF >gi|343385259|ref|AEM20749.1| hypothetical protein, complement(100797..101591) [Brachyspira intermedia PWS/A] MAFDFKLIVRDKYSEEIFDIINTVESIKADDIKTDYKVADGSRSYSIKTGIGNIASGRAFNIGIPIYEYKNESGSWVRIEEQYAKYTSMILSSNVKRYFIRTIFEDEIYEAEYIMKSVGGYNIKYINNLGVIDISLEALDKVFLRQKEEEYELPITEENKQDINYKSLSLVPVPVNFNLEFIVVGGALEFLFANRQNFGIQFNAELRNGVYNIDFDGEKLNVNGVAYNYKGLQPELNVGNNIFYLESNQTCVKASIIYKRGILI >gi|343385260|ref|AEM20750.1| methyl-accepting chemotaxis protein McpB, complement(102190..104373) [Brachyspira intermedia PWS/A] MENNNFMKKINSLAFRMPFVICVMVVVIIIAMLISSIKIGSKGISDSKLGGFNSTIAGYASVLDTWFGLESSLVNTYAVTPVVIRYLEGYQDTSLELLLNTIKNFKNNNLYIINMGLADMNGNIIADSASSALIGRNLKDYIPNAWSQESANKEEIIFSDTLMQSEVTGKWAMPAIKLVKDSNNQNAGYIYVLFDWSILHQTHFSNIDLGTTGGLFITSEKLYNIMDSKYENIANMKINPIYKQAFTGAGSGIITYDVNGEQRTAAYYKMKSRPWIIALAMMDYEIFAQNKKLIIATIIIGIISIVALAIFVSLFIGTITKPLEIVVEEAQEIERGDLSNIKQRIKPRKDEIGVLSKSFVSMRRKLAETITEVNTASNNIVKAAQELSQGNTDLSRRTESQAASLEETASSMEEMASTIKSSTDHAVAGNNMMVASREAVENAGKIIAETTTNIEEVYEASTKIKNITKIIEDIAFQTNILALNAAVEAARAGDQGKGFAVVASEVRNLAQTTQSSVKDITVLVDNTNEKINKATETARQSQDIFIDIQQKIEDTARIMQDISATAMEQQTGVDQVNRAVAEMDTVTQHNASLVQESANTSESLLAQAHVLKDTVSFFKLSADDLKKDNTAKVKKEVNEIKENNQKQKTKTPEIKKQNFEKKTDYKEDSYEVHKSSSKKELKVPPSVERARAMESQKQDNTTVRNDEFGVTYSSTSNGMTDDGFASF >gi|343385261|ref|AEM20751.1| iron-containing alcohol dehydrogenase, complement(104619..105779) [Brachyspira intermedia PWS/A] MNFNFYMPSKVIFGCGSLEKLHKQKLPGKKALIVTGGTSVKKYGYLKRLEEQLEKANINYCLFDKILPNPIKDHVMEGAALAKKENCDFVIGIGGGSSMDSSKSIAIMATNEGDYWDYIFGGTGKGKPIPNDPLPIVAITTTAGTGTEADPWTVITNGNEKIGFGYEKTYPYLSIVDPELMKTVPPKLTAYQGFDALFHSTEGYINKIASEMSDLFALKAIELIGKSLADAVKDGNNMEARENVAMANTLSGIVESTSSCTSEHSMEHAMSAYYPKLEHGAGLIIISKEYYTVIANSHDCDEKMINMAKALGKKDADKAMDFVDALVELQKACGVDNLKLSDYGMKKEDLPAIAKNAKFAMGGLFECDPHNFTDEEVLSILEKSYR >gi|343385262|ref|AEM20752.1| hypothetical protein, complement(106078..109107) [Brachyspira intermedia PWS/A] MKADSALSFLKKLDFETLENNDSFFYDFTEKLKKDKRLNIKYNDTAILQLLIDSYIDECAYNGDNESFENVIGSINSILIKNSSNIYARNKAAFLYYTKYIYDYDDIYYDIVSDHIERIIHHNNEVSYFILAILNHLKYVRTKNNNYFNKALDYYKEVLNIIGSDINLSYNIFSLYKSKYSNAEKEKHFNIVAEVYLEILDFDHDNMFALEHAAKLYKEEFLNTKNPDYYLLSINYYIDLYYSVNDIDILLNVGFLHTIMFKYSKYIQFSDDAVSVLKKIEEINNSNNLLYNLLGYVYSIRYSLTKNNKDFSSAINYYNKAKESDNNAYYFMAYLYILCYKNTKDELYFNASLSAFNHLDTDDIDILNSIAYLYECKFSITKNKDDFNNSLFYYNKALAIDCDYLYTYINRFELYRLAFCYFDDVNYFKFVINDYETLLNDGQLNNDNTLSYYMNYNLGCFYHFLYGNSLEDNFSCSNYNLREEFFNKALLFFSHSNSLIAISDLYRLKYIEDHNNNKYFNLSLSYIEKHFNSFRYDIKNLSQKAILYYEAYKVEKDIKYFNTALENFNYALEINEYDKTLYYNLAILNHLQLLENNFENYQSAEKNYLKAIDIDNEYYIAKENLGFLYNNLYSNYNVEEIFNNSLSCFETVLYNNKKSLISLEGLGDIYNLKIHNNDFDKEIKYEYIIKCLEYYNEALNLGVGIDTLYKKLSSIYFLLFSEYDDKIIINDYFDKYINLMHENRILANKYLFILNNVMYDIHKNNKYLIKAGKCLSSLNIDIFSIRLCIDFFKHLFDITKRIKYALFSLFYLEYIINIEKNNIDYYFDMGILHYKIFLKTKNYEYAVNSFHCYSRVLDINPKYPKCNYNRALILKHLFEKTSKMYFIENAFDNLVCSVKLGNIEAYSLMGDIYLLLYKKQKPDEEYLDRAIYNYNMSIENKYYGKNNYEIYFNLGICYYFKYKKHREVNEYFNNSLDYYKKALNINKRNVKIRRFIKYLQIIKKLPRSS >gi|343385263|ref|AEM20753.1| hypothetical protein, complement(109138..109485) [Brachyspira intermedia PWS/A] MKKISALLLFIFSSFLFSYYCPYDNYDYFIINAEGLTEKQLQEIIKLKEKYQPKFHELKQKINIEKIKIDIEMCKEKRNQKIIDESIQLNIEYNKELKKIANEFFKEYNKIKTEN >gi|343385264|ref|AEM20754.1| hypothetical protein, complement(109634..109978) [Brachyspira intermedia PWS/A] MVLFITVILSISLFAESENYYCANEPYTYFIYSEDSLTEKQLNEIMKLKDKYQPKISELRKKMYLERTKINLEMSKKNPDELVVNNSLKLNMEYAKELKKIASDFLQEYNEIKK >gi|343385265|ref|AEM20755.1| trep, complement(110256..113030) [Brachyspira intermedia PWS/A] MKKLFLFFALILILSVNLYTQTFKPFRKLYTIQTKKFEIIFPIESRRTAENLAKVADDIYEKYSKILNSTVRGKNPITITPDFNLFNSAAMIIPYSSLILYDTNLDENFTSYSNNFETVFIHELTHLLSMASENTGLATKVMGNWASFVHINAMPFMIEGAPVSMESLTGFGRANDPLVKQRLRQDIFEGNFRTPIQASYVWTKSPYGNVYYEYGGLFSKYLQDRFGMEKYAEFWNRMQTKLHFSFLVYNSGVYGAFKKVYGIKFTEAWADFQNSLALENVNPSEELIVNDKETFINDLHSYNDTVYYIDGDIGALYSYKEKRNNENNKKDLKLEFLIDRGSESLDISKDGNNALIVSVMFNGGLYKYIVKEYDLNKKTRTKRKWFDMQYARYFRNGIIGISKDLHNSILVYINENDEKEILLQANDNFGYSSPAVIDDNNIALIVTENGIKHIAIFNYNNKSLRYINTKDNTLNYVRTLRYSNNKLLFSYNNNDRFYKLGEIDLNNNKIKLYTKDYSGGVLSPVYAGENIYYKGRFSEYDRLMKYSDNESVTKNFAYADKTINKYEFTPQMELENYNGFKYFKPWAMWVPLPQLNDTFPFFINGLGILSVVASPSSDNLALIWLGYDIPSNFLQTELTVTSYKMLYPLYFGFKSDVVYSTYNYWRLNTYLAMQFLLNTESDKLYFMLEPSISGALFSEFVNPQTNTSTAFTWKYSSWTLNVSLKASMIFRVQTDKPYRDDLVNLTVIPKYSIRYNKFAIDFSTKFQTRYVPIRASFYGSYAFGTNTAFDGASTVFGSSEVKAPEEFYAYVQNKKYKANYFLGGDVELLGYLSSHFNLSHIYFDNFFASLSYRFAYYSKEYMHSAALKVGFDASIPISGYQNIVTGEPYILLALRLPTTLDKTVIGNYPTLNDLYIGFGLQMSW >gi|343385266|ref|AEM20756.1| conserved hypothetical protein, complement(113153..113575) [Brachyspira intermedia PWS/A] MNRKKISIIEKILICSVGIFLTFDGIVGFFSFIDTKNYIHTVGVVEELDRRKIVYNPRKIGYKKVMVIRYEADNHGTLYATLRSHYPFRKVGDELPLWYDPNEPKNIKLPFSDSISYILSIVIGLLIIYFGLYIVNKNKY >gi|343385267|ref|AEM20757.1| putative Na+/H+ dicarboxylate symporte, complement(114184..115368) [Brachyspira intermedia PWS/A] MEELEPKSKKDYLLVKLLLGIALGIVIGMVCNEAVINVIQSIKYVLNQVISFMVPLIVLGFIAPAITRMGNRANKMLGVILALAYFSSVGAALFATIAGYIIIPNLNIASNVAGGKELPEIIFKLDINPIFPVITALFLAICGGVAVVKTKSKYFENLLDELNNIILFLVNNVVVPILPFYIGTTFATLSYEGTIIKSVPVFLIIIIIAIVGHFIWLTVLYSIAGIVSKKNPARVFKHYGPAYFTAVGTMSSAATLPVALKCASKSDALDKDIVNFAIPMGATIHLCGSVLTETFFVMTISKILYGQLPAVGTMILFVILLGIFAVGAPGVPGGTVVASLGIIISVLGFNDDGTALILAIFALQDSFGTACNVTGDGALALILQGIFKKDQKVS >gi|343385268|ref|AEM20758.1| Fe-S oxidoreductase, complement(115804..116775) [Brachyspira intermedia PWS/A] MQNKNNIQNNKNYYSFSDYVKNKFGVKVGKISIDTDFGCAHKANDGGCRFCNLNSYKPPYVAEEDINNQWINGLKNYRGRYQKFYGYFQLGTPLSQLASKESLKYANKLVHFDECVGLMFGARSDMLEDDVLKELSDLSYSSGKEIWLEMGLQSSNDETSKFINRGHDYKSFAEMVNHIKTNYSNIIICTHIIFGLPKKINDDNKKIIELESRDDMIKTVKDVSALKIDAVKFHQLDIVKGSYFENIYRDYHFPTLDEDFYIDLMSDAISFTRSDIIIARLMGDSLGDSLIAPKWTKSKGEIINLITKRMKEKNIIQGINYNV >gi|343385269|ref|AEM20759.1| conserved hypothetical protein, 117576..119075 [Brachyspira intermedia PWS/A] MSFLDLLKNSFNKTYTQNFADTNISSLSGVLDLFATMGASRLKKDDELLKYFIDAWRESPELTAKCMMYLRDIRKGIGEREVFRKYINIMIKQNHTLTAIEILKTIPELGRWDDIIYVWYENRENKNISDFTKNIILDQLEKDKTTDNVSLLAKWLPSENTSSKNTRNIARELIKLLNINTKEYRKILSALRKKIKIIENNLREKDYTFNYSSVPSLAIRKYSKAFIRNDEERYKQFFEDVKSGKVKLNTSVLTPFDVIREILDCDKEDIKSRREEFDLTWKNLPNIFGDNNLNAIVACDVSGSMGMYSNGEPLICSVALGIYIAQLNKSAFHNHFIDFCGNSKMHDISNINNIVDIVNYVLRSSIDMSTNIDSVFKALLDTAVKNHVPQEELPKYIIIISDMEFNQCEMQNKTNFEYWKEIFNKNNYKLPTIIFWNVNSLSIIIPALKNDDVLFVSGRSQNVIKNIINIDKYDLTNQDEISMLLILDTLKDYSIDIKD >gi|343385270|ref|AEM20760.1| Hvp 45 VSH-1 capsid protein, 119681..120904 [Brachyspira intermedia PWS/A] MQNIENKQSKIEKIIEEYDNKLKDKNREIEKLNDELNRVSTNNYNSGIPNVISNRGDESDDFSFPHKWALTCKRMENSIYLEPILQFYRGVFNSFNYFLERPKECEDNEKVNNAYNFFISQFERAGGLKNLIVNVSYNALVYGFCFFTPKLEVLPARAYGFKGRLDGLKGFKYYDPSSIYRFNFDEHDSDEIKSISIIKRHKEIFNGSYDEASIIDIDFDLALAGYASYGSIEGDIIGKPFLYSAYSLWQILESMDNSFNRNLKNIGEHSFNFIANTELNDSKRKEAEREIRNFINNGGGIFISKYGKIEKIESIDANEWYNFRDSMLSALFKNKGVDIKALGLNKGATKSLAELTQDNALLMASDIVSGIINYINNSFIKRYFDLNFKSLRLSGQCDYFRISHSLE >gi|343385271|ref|AEM20761.1| hypothetical protein, 121073..121315 [Brachyspira intermedia PWS/A] MAVKLFSKEELQKCTTEKEVEAYFDSLGIEKNDYETKIDALTKACNSKAIKYFGNISLEKKYNDILVMFLDEDVRMYRGF >gi|343385272|ref|AEM20762.1| protein of unknown function DUF955, 121321..121947 [Brachyspira intermedia PWS/A] MSKLGLKNIADICGYTSIAKHHKLLDDLESNVMDNLILKYIEKSLLSHWKSAIENIILQNRQSDFREHLKEKEKQGDIINNRDFRILNIALYKIFIKEKEISSYGFLSPDEEPYVDIIIINKNMTIPEKRCVVAHELAHIIVERILKEKNVGINWDIVNEEELMDAIMCYILYDKSNFYKDDKLRNFIVDGVSEFKELRESIIDKYGN >gi|343385273|ref|AEM20763.1| Hvp 19/Hvp 22 VSH-1 associated protein 1, 122243..123196 [Brachyspira intermedia PWS/A] MIKKKYKILGDSFKQYIPLSKNTFAETKTNKITEKNIDELIKSFEKSRIEIFVYKGHKEDEEREAIGKVVSLEKDNEYVGLYAVIEWFDDSITEKKSFYPSIEMVGKKSYEDENFIYWENCEIKAVAAVEYPASRNVDLLCASAIISNEENINGEYMQKLKNVLEKLISEEKEIQKEARDEFVYLFRNDEEIQNIIIDMIVKKLKEDNSKENNKDKSNKDLNNLDNSNKELNLSAITYGDWCNEYAESQNAVRCSSKSESSTFIKARKLFKAGLSKEEIMSIVRNDLVPIGVGGGEKINLSALSEENKYSEIAKLFK >gi|343385274|ref|AEM20764.1| Hvp 13 VSH-1 associated protein 2, 123448..123816 [Brachyspira intermedia PWS/A] MAQGSIIKAGINSDEANLPKRGFPVSIKDDNGKGVFSLYSEGSVFIGVALEDAFSYKEFGLKPNAISVCYDGIVNAVVAESVIAGDIVTASDKGFKKSLDGHGVGIVIRGGSNYAEILLKSV >gi|343385275|ref|AEM20765.1| Hvp 38 VSH-1 associated protein 3, 124010..125053 [Brachyspira intermedia PWS/A] MSIPNLQNIQNKLFPIINKEMPRYMGQTNFVSKYIPEIFVGVSQGAIGGDLDNTAFNLKNMYGGTSLGDLNIFNEYPKHEARVFKMEPEEYYIGIDINRIEEINELYARDEKKAGEEILNYIAQKLVSRLGLLRERNLAAKVTDAELYGSTNTVDLTAKPISTWTEADIDNFFSSFIDLAKYLNYAVGGNLFNDKMELQDNGQKLYIVIPIDVYIKLQGLFRLFSNYISMIGNDANGKYKAFRPDIFNAVTSGITVVGTAFRVADDHEVDQKYQLENLTDIWTGSSIYMFTTSSNVLDMASIKEVVYLNHDIREVDILGNNLWRTRTKRCTVASNPYGFCKIDLSLS >gi|343385276|ref|AEM20766.1| conserved hypothetical protein, 125507..125719 [Brachyspira intermedia PWS/A] MGYFFRDVHERICKVIVESDLNISLSDSFLIISKEEAEELIREKMKPNDVINYLKEENKKLKEKIKELEA >gi|343385277|ref|AEM20767.1| hypothetical protein, 125797..126180 [Brachyspira intermedia PWS/A] MQEYIYEPDIDYFKSIFKMFNYDDIDIEFLKEQLKNYTIQFRRMILNMNYTEPTEENGLPFISIKNYICYEVARLLTVNFVSNSDLINFIRTESLRLKELAIKDLSSIVVGENSYDSVRLYGDIKKP >gi|343385278|ref|AEM20768.1| Hvp 24 VSH-1 capsid protein, 126488..127045 [Brachyspira intermedia PWS/A] MIHFKNSVIYVLDNFMNFMADEYIDFSGNKVQGENNLNSLLDDKLKIDCFSLGAVKSMSKSFLWATISEGESRGDKSYIGDSAGFADDISLKATVYKEIKAGESFLAYTMIPLALNQASRYWISKLNDEGERIALSPVIKWESPSFDSENNKRQFNDFSSIRGVSFSLDINFRIMTGSYLNEVLY >gi|343385279|ref|AEM20769.1| hypothetical protein, 127029..127301 [Brachyspira intermedia PWS/A] MKFFTNLINKAFNKKIYDYVQNRDKFYKIKITSSPENAVIIMNEEEKYFGAYKNGEVINYQVSLEGYQTKEGSITVDNRDILENVVLESV >gi|343385280|ref|AEM20770.1| Hvp 53 VSH-1 major tail protein, 127431..128903 [Brachyspira intermedia PWS/A] MGWAGGVIIVKNKNNIIILCRGKIMSIFDLKGNLMNDEDGLTVVSGSSYKVRIAKTNNRNEKVDFTSDDVKGKYLIYPSSVGLTPTTESMSKEYVGAPSSESYAGATTYAGDISYGAFPNTNAYYASLIWANVHTKETTGNLLCINSFNNFAVRFNKSSEDESIINMLEIIIEEYDGYNSNFIDVYDSMKQKDLIESINKIKDMKAFLITGSEEDEIDFTNIINELEEYNSENNQTEYLLSFKRVGLIESGVFGEEDKKKYPKYQSIIAPRFGEAQYYNIALYDGSKNMDGNQYIGCESKSMNFNFANKAMTEISSSLWALDEITIDKDSVLYEERAEERDVVMAQTSKYPTKLFINGTEATSVSDVALAFEWTKEEKFNISAKRYGFPNSKFTLSFSGNAVFNIQSKELFYNRVLNGNRQSFIISSKTRFKNKDYPFIFISTDVGGSPSFPAIEPKELSISLSNFKAIEQSNDMNSNYLIAFTDREDLF >gi|343385281|ref|AEM20771.1| hypothetical protein, 129434..129790 [Brachyspira intermedia PWS/A] MEKLEFKCVDFFNRYIIEEIVYKDDGENIVPVKVFSRSTLGNKFKSDDIISINRPSFNENIKYVREKEEKIIDDDIFKWLDVRINNNLAVSLLDEWSTKDINEFAQVIKSFLLERRIM >gi|343385282|ref|AEM20772.1| hypothetical protein, 129790..130080 [Brachyspira intermedia PWS/A] MKFSVIEQTEIDNLVNYAFNNREVKYDDFCYFNNGLISLYTASLFWNKIILEAWYQIISGRFVHCVYDEDDYLRLGLNYAVFRFKILIDKSIHNNK >gi|343385283|ref|AEM20773.1| Hvp 32 VSH-1 tail protein, 130141..131016 [Brachyspira intermedia PWS/A] MISSTKGTILNYFGLSNTYNPFKDENALQVAENLYFEIPIEPFENSNYVAVSTGLLTNSLSFLNDCIFEIYDSDTKIADLQNVIGEIGNDKYIPKEGQIFWFNKDGLRGTYFLNSIYAGKKLKLVSGRYITTSITSGVLNDMFERTVGVPSYIEEINNMIDDIKNNSTFIIKETITKSGSGNQNWELNWRDDLEYLQVSGYISGDIKAMQSMSSFGLYQTINDKAPFIGWFGSSSAAYYYGGEFQNSFANITAGLPNIKWFPILNPKPILAIKNSSEQTIIAELYFLVRYK >gi|343385284|ref|AEM20774.1| Hvp 101 VSH-1 tail protein, 131081..133624 [Brachyspira intermedia PWS/A] MILNENNIQSPFQYKISENTFQLLKRNGELELNTDNIQVRVFEGQRLFCADIGYAVDGPLENMEFLIDDIKVYPQLLESLKDLQTVYVKDNEIYLVNNDLNFKSIIFFPPSDLNKNFKFDITTYSTTFSSFMFDEIAKKLNTLDTNYPIKNYYANIDYKVNDVIKNNGYFYRVFKDFKSDNTDYYLKNNCNLITPFKKLELDTDYKANELIEYENNFLMVQKDFRYENKNGVLTNLNGLLKPLQDIIIWFDGIAKIYKNQIIIKDNISYIVLEDIENPVWGNIQKKLNRFIKAENTFYDDTNSGFGNNTNNVQKAIEKLKSGKQDSLTAGNNINLNGNNISVIGGTNKEYELGSLYFINDLIIKDDKIYQVNENFTASNWNTDISKCTLVSGGEIVGQVKAVDVSFDNSNTQLQQLVGYDYPKYKKTIADSINMVFTNGSSDYNASIVKQSDGSYRLKCNISNYYIGSRDMGVFLTVKNINNIDNIYERLSFLSQFFNIQTNYTSIESLNYVNLTSDEYIISDLNLNLKFVFIYSSYNKSLSLMIVKQDFTPIIEGTYNITLNIRNRVLRQEDRNIFAFSSGFMTEQDIMDNYIFNLSQNNSSVKLKGSYTLKAGAGLLIAFYSPIIENYFNVSNSGEWTNTNGITSSSKKPLKFSLYKNSDAGNENPLYLLFIMHQDETDLTVGETITFNLTPDKNSTLNPIYSTVTNVQQMGDALGNNIYDYSGVETIVPGAKVITLDGKTHKVYRKYFEIEYEFLKDNVAHALTALSINGKVLLFETIQVKTRYLPENLVWNQEIYSGKVSNSTHRFDEFLVRITERGFSIIYQISIESSYNYEGYSGWVQYYK >gi|343385285|ref|AEM20775.1| Hvp 28 VSH-1 tail protein, 133639..133938 [Brachyspira intermedia PWS/A] MKDMFDKKYSKLEKDGKTLTPKTDKELFEENIITKEEYNERINQKRETLYENKTDKQVIELSRNFFNKNKDNLLEEEKFVLDSINKEVEEIKTQYPKQN >gi|343385286|ref|AEM20776.1| Lys - endolysin, 134052..134645 [Brachyspira intermedia PWS/A] MITKEQIIKIGIEEKWLEPLNNAFIKYHITDINEKAMFLAQTTHESNNYKRLEESFNYSPKRLFEVFRKRVGSLENAKKLCNEGSKSIADFVYGGRLGNAKDEGYKYRGRGIMHLTGKNNYEYYGKKLNIDLVNNPHLAKEPDEAIEIALLFWKEKGCGMFAKMRDVKTVTKLINGGYNGLDDRQKRFNSILKILES >gi|343385287|ref|AEM20777.1| hypothetical protein, 134667..135521 [Brachyspira intermedia PWS/A] MDLYTFVSIVFGFLAFILFLRFLYYIFGNVKDKMKDINIEAKHKDGHQFNINSNFDNKIKEVKKEILNNDDINEEKLLNNLNIKVPTEKEFNYQEAIKKYKTEIYNLKNKYITKTIYIAFLYIVLNWESYTRKVFRKVIYKNGISKYEGHKYSEYKQKYIDNIILAFNQLLQRSEIKSLQNKEIKIILNTNMLLFNMELNRIFDDIKNRHIDAENSRKEINLSTIKDNYNNREIIESELENINDFNEALREIEDSILNKDIKELKEFILGNFLNMLKNNVRNSK >gi|343385288|ref|AEM20778.1| Hol, 135518..135775 [Brachyspira intermedia PWS/A] MSIFNFTDKHNANKKLSIYTSIISFLLGCIWVFVNLIYRGRIITKEESIAVVIILLGLNAVSFGSDLRGFIKLLKNKDIKKDDND >gi|343385289|ref|AEM20779.1| hypothetical protein, 135837..136124 [Brachyspira intermedia PWS/A] MFIIIACISIYILFLNINLNNKNKEIDKLNNDIINLKATNSLLYKDINFKQKQLMILDTFTNSDNVIRNIKNKKLSDDTINALNIIINDYRKTLK >gi|343385290|ref|AEM20780.1| methyl-accepting chemotaxis protein McpB, 136505..138292 [Brachyspira intermedia PWS/A] MGKFDSIMFKIPLMVIVMILILSVTIISVSISLATKELNNVTASGFETSVNGFSSLIDSILSYQSTLIESYANIPTIKEYVSSRSEEVQNRAIRTMTILFDNNDYIIDLLMLDLNGKVIESYDGSKDLTGTDISTKYNRLWTAFVNQNYKTTLSFSIYKEGNDIILPVLQGVKDNNNTVVGAFIAYVNWGKIIDESLKDSKDQFSTDKTLFIINDYSEIVYHNNKNRLFSKATDSLIIPENETSGLLSYVREGVGISAFFKKLSTTRWTMVERTTDDLLYAPGKKMILIGIISTIKPIKFIVKEAHDMAEGNFALSATIENRHDEIGELSHSFQVMRDKIVSVITDVLDASTEIANAATQLYKGGEDLAERTEYQASSLEETASSMEEMASTIKSSAQHSIDGNNVMIDSRNAVEEGAVVIGNTTQMIEDVYESSAKIKNITKVIEDIAFQTNILALNASVEAARAGDQGRGFAVVASEVRNLAQNSQASAKDITLLIDDIYEKINKSAEMARHSQEIFNNIESKIEETSKIMNDISHTAVEQEAGVDQVNTAVAKMDSITQQNAALVEEATSASKSLLDQAKHLEDLMSFFRVK >gi|343385291|ref|AEM20781.1| methyl-accepting chemotaxis protein McpB, 138466..140301 [Brachyspira intermedia PWS/A] MKKINSIAVKLPLIVNIVTIMICVFIILSLLKVAVDEINGYVNTNIETSANGYCNFLDKTIEEQTLLMQSYSSMPVIIDYLKNYIWMEGTVFITLQKVLNNNEFITNAYILSSDSSLISSYDGKLKDSSIKISSQYPDLWNKFVSKNYEITIADNIYKSDINNGFVLPIICPILDYDNTFLGAFIGFIDWSLIIQDSLNRFGNVFNKDNSIFIINANNECVFHNISSELNKKLDIGIPQNGASGIIKYDYFNESKLAFYKRMEIMPWVLANGVSEKLIYSAPKKMLLIGSLIGLIGIIISVLFSVFYIRKTINPIKYIVKEAKEISSGNFASNSNIKASNDEIGELLDSFSEMRSKFSTMIKEILMASKEIANSASELYAGSEDLAKRTEYQASSLEETASSMEEMASTIKSSAQNSVDGNEVMMASRNAVLEGGSVIANTTKMIEDVYDASAKIKNITKVIEDIAFQTNILALNASVEAARAGDQGRGFAVVASEVRNLAQNSQTSAKDITVLIEDIYEKINKSAEMARHSQEIFSDIESKIEETSKIMSDISHTAVEQEAGVDQVNSAVSKMDSITQQNASLVEQSTAASKSLLDQAKHLEELMSFFRL >gi|343385292|ref|AEM20782.1| methyl-accepting chemotaxis protein McpB, 140513..142363 [Brachyspira intermedia PWS/A] MKRFNSITLKIPLIVNIVIVVLSFTIIFASIQIASRAINNATYSGFETSVNGYSTLLDTILEDQLLIMDAYSRIPTIIEYMETRSEYIKDRAIQTMINLFDNNDYIVTLDLIDLDGKVIEAYNGDEKNAGLDMAAAYPQLWKEYVDSGYDHATSDDIYKSDINKGFVLPIVHSIYNLDNKLIGSFVAFVDWSRIINNTLEDTRNELSAEKTIFVVNEADLQCVYHNIDATIGTKANESLMPPAGKSSGIFTYTFNDVSRTAFFKRMQTQPWFMMAGITQKLLYAESKKITIIGTLLGVIGIIISSIVSGFYIGKSIKPIKNIVDEAHEMANGNFVFQSKFTNRHDEIGELSQSFDMMRNRFVEVISEVLNASKEIASAASELHKGSEDLASRTEYQASSLEETASSMEEMASTIKSSAQNSVDGNEVMMASRNAVVEGGSVIANTTKMIEDVYDASAKIKNITKVIEDIAFQTNILALNASVEAARAGDQGRGFAVVASEVRNLAQNSQTSAKDITVLIEDIYEKINKSAEMARHSQEIFSDIELKIEETSKIMSDISHTAVEQEAGVDQVNSAVSKMDSITQQNASLVEQSTAASKALLDQANHLEELMSFFKVQ >gi|343385293|ref|AEM20783.1| hypothetical protein, 142480..143310 [Brachyspira intermedia PWS/A] MKYRLILLIILFISCTNRNNVSSENTLKRDEIEPNNSLEYSQYIDCNTVISGNIDDYNDVDFYQINPTNGFVMDFSMSVYNLDANISMNIISTNNDTIFSINSEDISNYKGFIELKDILLNDDAYYFKLNADKECKYNLKFIFNDDYIPANEAEPNNTIYEADTIHYPNEMVYGYFIKNYFNIDEYMKPYIKKSGLIDVDFYQIKNDTDINTSINIKLEYSKDIDIILFDENYNYLKQGINQLNTSFEPNKKYYIALVCYGDKYIAERYILHYEFN >gi|343385294|ref|AEM20784.1| Na+/H+ antiporter, 143605..145236 [Brachyspira intermedia PWS/A] MEHYGLLGIIPPLLAIILALVTKEVIISLTLGILSGTLIIAHGNVFTAITIFTDKVADMSGDAWNIRILLFCALLGAFVSMLSKTGATKAFGLWASKYLKTKKSILIFTWFFGLIIFIDDYFNSLSVGTVMRPVSDQNKISRAKLAYILDSTAAPVCILAPISTWVVTVMSYIRDSEGFESLNISEFVFFIKMIPYSVYPLLALAFVVLISLVFKDFGPMKRSEDNAQNGKLFDEELYGACPGNMETSSNNQAKWYDMVIAILVLIIVCIVMFPVTTYMGLVGSDGIETFSQAMSSISLNQAFLDTDASKALFYGAVISLMIMYIYYVARRLLSVRSAGNSIMEGVKSMVPALVVLALAWSIGSVIKSSPADGGLGLAAFLSEAVKGGGFPLWILPAIGYLLGCVIAFSTGTSWGTFAILIPIVIPIANGLAAANGYTDNALLNVLLINVGSVVSGAVFGDHCSPISDTTILSSTGSNCPLLEHVATQIPYAGLVAISAFIGVIVGGVTLNPIAALLTGFIVMCVLALLAPKFYDKISSFKKS >gi|343385295|ref|AEM20785.1| Putative GTPase, complement(145848..146819) [Brachyspira intermedia PWS/A] MKILIVSGFLGAGKTTLIKEMANKTKRDFVVMENEYGDVDIDSNILKDEGMNIWELTEGCVCCTMKQDFASSILTIANSLDPEYLIVEPTGAAKLSNIINNIKQIEYERIVLLKPITIIDGNTFDSFINSYDDIYTDQILNGSKIIISKMESKEEYEKEDLIKKIKSLIIKNNLPLDNIEILEEHYSNKDKKWWENILNSFLDDKYAIKELEKPKNEEMPDSISMKACCVESENKFMTLLEDIIHGRFGFIARSKGFIKCGSNYFRYDVVGERYAVTGADENDKLEVVFIGKDLNRKLLREEFQPVYRDNIKHKEEHCEGHKK >gi|343385296|ref|AEM20786.1| Tdh, Threonine dehydrogenase-like Zn-dependent dehydrogenase, 147055..148101 [Brachyspira intermedia PWS/A] MLKIGESGWIEKERPACGPADAIVKPLAVAICTSDVHTLWEGAIGERHNMILGHEACGEVVEVGSLVKDFKPGDKVLVPAITPDWNSVEAQAGYSMHSGGMLAGWKFSNFKDGVFGEFFHVNDADGNLALLPSNIDPVDACMLSDMVPTGFHGAELADVQYGDSVLVIGIGPVGLMGVAGAALRGASRIIAVGTRPNCVEAAKKYGAEEFISYKNGTIDEQVLKMTNGKGVDKVIIAGGGVETFAEAVRSLKPGGKIGNVNYLGKGDYIQIPRAEWGVGMGHKAILGGLMPGGRLRMEKLGALVASGKLNVHHLVSHVFDGWENLEKALFMMRDKPADLIKPVVRIEK >gi|343385297|ref|AEM20787.1| hypothetical protein, complement(148507..148950) [Brachyspira intermedia PWS/A] MIRKSLFILLFAFIILSCNSKYEPNNSEIQEVFELVNQTRADIGRYALILDEKLNRAAAIRAEEISILFDHIRPNKTAYYTVSKEVEGCREPSAENIARYQKTPQAVMEAWINSQGHYNNIIASHSYIGIGVYKDSNGKLYWVQLFD >gi|343385298|ref|AEM20788.1| thymidine kinase, complement(148983..149552) [Brachyspira intermedia PWS/A] MFAGKSKYLIKTLDYLLLENKNIKILFIYPAISFRGYFCRDKNVYLDKRIDIITEEEIENNIGKDVENIYNYIARYDIVGIDEFCFLNDTSIFIKLIKTCTQRNCKTNFCIASLDMDYKRNYWESVSALIEEDLIDIHTKVFGKCDCGRKGIYSKRIVKDVDRVVIGDDIYKCVCRYCYEGEDEVKFDL >gi|343385299|ref|AEM20789.1| HrgA protein, 151864..152370 [Brachyspira intermedia PWS/A] MKWGTPDIVAVTFKDYINKSVLKLFNHINLPTTELYAYELKLKLTLGSLTEYYFQALSNSGWANEAWLVAMEIDENNYDELMEEIKRLNQSFGVGVIKLDYNNPEDSEILFSAKKRNYLDIDTMHKLCYNRQFQDFINDVNEILEAKDKSKNHIISSLINSGRFNNPN >gi|343385300|ref|AEM20790.1| hypothetical protein, 152503..154923 [Brachyspira intermedia PWS/A] MKKWIYITFLLISILFLILNILGRITRVGYLSDFQLDIQKTLELNNIKDVEDVESIYTNKNIKIYFYNYKLKYYNNIFKNNDIYDVYLYTNEVLSKNNFLKEINTENNGSTFGSFISYEIINSKSIDNIPYILKLKQTILYVFILFVFLLSFIIFVHNRNSLKIKIFNTLLLFVIFVILSKYVLKIYFINYIGIIFFILLYYFFIYYKNYHNSFSISNKKQYLILYMSAILFSIINIVILNCSFPLVGHDFTMIIPRAYSLLIYAKNNGIFSTEFASPLIGAGIISYANPQYDQYSIFYFVRYFLSFWDSYLLLTFLFSFIGFISFYYAVKDILKCPFIISLMSAALFLCTSYYMHHIAVGHWAFLYHPLTAFIVWLSFTDRFNYITRIVLSGLAFSMMIFGGAMQTIFFFTCFSLLGIASILFKPNKKFIYQCISILLSVSLGIILSLSKFIQAIYFGSKIDRGPYGLYINDVKLLLSNILHIFIYPFYNLININSFLTNSNMRINIDHQYIGEVWEADLGLPAVVFIFGLFMMINLLKNYFSKKSLINFINKYKFNLIFILIFIYLYCDIFFGDGLTRSVFNTLKAVNIHLRMSSVLIIPFLFVFALLIKNINIKNTYKNIIIIFIIISSVLLYVQKFIYIKEHNNAYINVNIRDDKTIFKNIKLNHNQYRVFYINNKKEFLNLKDFITTTNLNTSRLPYESIYGYSLETFKPKEEGSPYKIINGEYNFTDPRSLIFFNDEYPQFSGFATNDKNTLDNFLSFQSVNWKIPKMFTISNYISVISHIIIFLFLVFSIFYYLLKRKK >gi|343385301|ref|AEM20791.1| peptidase/protease, 154964..157129 [Brachyspira intermedia PWS/A] MLLRKIELLAPVGDERGLKAAVNAGADAVYFGTKSFNARVGAAENFDEKVLEENIKFAKLRNVNVYITVNTLVYNDEIDKVLPLIKSVSDLGADAIIVQDLGVIDIVRNNLTIPMHASTQMSCNNLESVKLLKSIGIDRVVLAREMSLENIKYIRDNTDIELETFVHGALCVSFSGQCAYSYLHGGRSANRGACAQPCRMEYTGGKTDYPLSTKDLMTIDIIPNLLESGITSFKIEGRAKRSEYAAITTSIYRHAIDLALENKDIPIEKYREDLMKIFNRGGFSQGYYYNSKDIFENYKPSHDGEYIGEVTAYKKNKIYIKVEKELNVYDGLSFGESGKVGMQISDLYKDNVRVKRAKGNLSFSAVLKNVNIGDEVYRTTDKLQMDEADKIIESDHFKHLLDLNCIIGFNDIDDNEKIKLIVNSKYDDRLNNIEYISDYTLQEAKTKATTKEDIFNSLSKTGGTVFEFENINIEENFKNPFIPVKILNEARRCLIEKLENILMQSKKINYNKDCEKNINYPNTDIKVLIANSEEKINLYSDIHYDKKILFPNIYDENIIKLFEAKKIDGILLPHVTFDKDIEVIKSIVEKTNNMIVICNNLGHIEALKGKAILWAGIGLNAINNYSVNLLYKLGIDTVISAIEAGKNLKHTLSVKEGFIPAMNFAFCPKSMSVGCSKCKEEDIIDHRGNTVIFDCVRMHNKTSFILEKIKNKNGNIYYSIY >gi|343385302|ref|AEM20792.1| hypothetical protein, complement(157548..157928) [Brachyspira intermedia PWS/A] MKRIFSIILFTVILSVSVYAKEKRYDWKDYNGKCNYEYFIYNEAGLTQAQLTEVMKLKSEYQSRFHDLKEKIYLEKTKMDLEMSKKNSDPNIISNSMNLNIQYSKELQDLADEFLAKYNDIKNNTY >gi|343385303|ref|AEM20793.1| acyl-CoA synthetase, complement(158430..160100) [Brachyspira intermedia PWS/A] MIKERLSDYIQNTIKENWDINALVDYGTNNILKYSDIAKNILKIHTGFKKLDIHKGEKIALCGANSVNWALTYISIVSYGAVVVPILVDFSKEDIASILKDSGVKFLFADSNILKGIDSNSLSLLTKSFHLNNFDTFTIEEENTKEKSEEKKESNKKIENIFSDIEIGDIKKEDFNLTIFENDTLATIIYTSGTTGFSKGVMLNHNSLAANIRFAINNMPIKPNDHILSFLPLAHVFGCLFDFLFPFSRGACIYMLNAIPSPNILLKAFDEVKPNLILMVPLIIEKIYLKKILPTISKPLIANLLKLPIISSILKSKIRNTLTQSFGGNFHEVIIGGSALNSDVEKFLMDIGFKFTVGYGMTECGPLISYGPWDKHVPRSCGCIIDTLEVKIDAEKEGDVGEIMVKGENVMLGYYKNYKATADVLSKDGWLRTGDLGVLGENNRIFIRGRSKNMLLGASGQNIYPEEIESKLNAMPYILESLVLQRDNKLHALLYLDAERIRDEKLSEEEVNKLIENNRIEVNKLLPEFGRISGFTIQKEEFIKNPTKKIKRFLYK >gi|343385304|ref|AEM20794.1| putative channel protein, hemolysin III family protein, complement(160140..160811) [Brachyspira intermedia PWS/A] MNADLNNNIVKNSVSKISAVICIICASSAIAVLVLLIINSKTAREITSFSLYSSFLTIFYIINSIYHFFPFNNKAKKVFYILSHAFFIMMIWGIYIPPCLISLQNGWGWSFFGIITGLCALGITLRSVFGYRWRGATETIYYFLLNWVWLIAISKIAAAVGEYGAILYLTGFLLLNIAMVFYRLAMYEANRRYTLFLPLFYSLLIISNVCHAVFMFRYVANIF >gi|343385305|ref|AEM20795.1| D-alanine--D-alanine ligase, 160988..161974 [Brachyspira intermedia PWS/A] MILNSELKQNILNRFKNKKIAVLHGGLSSEREVSLRSGQNVYKALTSFDEIKDNCILIDVKDSYELVKTLKENNIEYCYNILHGTSGEDGTIQGLLESLNIKYTGENILVSAVCMNKVYTKRIWKSSNVSTADFMLLKDVKEINDNNVKGSLLSFNFPIILKPISDGSSVGVHLIKTKSEFENVVKDIKDIQNYFLEPYIKGKEITVGLVKQDDDNTYVFPILGINPKNEIYDYEAKYTPGKTEMEMPAKLSKEMENKVVETCKKAYRVLGCSGLSRIDAIVGDDNEVYLMEVNTQGGMTNTSDIPAMAKHINLDFNDLVLYILGLLK >gi|343385306|ref|AEM20796.1| dinB family protein, complement(162360..162995) [Brachyspira intermedia PWS/A] MKSNLLNAKKDNTTKEVSKKIDEKKKDIENSQNKKPIDKTAKKIMNMMALYNKNANKKLIEILLTVKEEDLIKETNAYFKSVLGTFKHIIQCDIYFFNVYRKYSSKKKIENEDILNYLNEDFTFNINIDEDLNSLIDIRKKLDDVIIAIVNSIEDFNISGKVIIPNAVIKKPRYHLIMHALNHATHHRGEISVMLDQMEYKNDYSNLMTMI >gi|343385307|ref|AEM20797.1| hypothetical protein, complement(163342..164073) [Brachyspira intermedia PWS/A] MIIIISCSKNNPNNPTDNKLPLRTTSVNFDEVFLKFETDNKTVPTFTFFKDDGTAATGPRQWTADNDGTNTCYIYNAPDGESGNQMPSEQPSKPFPINGLKVYVYRGINPFEKVIRNDIEKQFYFYRYIGKLVIVAGMLEVDLDNFLVAVDTKTGYVFPYAVPEKWSALGSPAGWISAELGRTGDPNGGADITFEAHKFWQYDPIGVVNDDGTVTLYDFYITAQGNSDYKPRYTGTSPYRDIQ >gi|343385308|ref|AEM20798.1| hypothetical protein, 164387..164848 [Brachyspira intermedia PWS/A] MKKTAILLSLILSAFIISSCAEKNPNNPNDNSNNIPLSERAGKYTGTIAQINNMSLEMILNNTGSLTSLKVNNEESLDQSNPINVGDSTSKSTTFGPFNATIKLGGNPASAQVQITFKSGTDKTLGASVDIDIIDDGKFDPSIKDVILNYQAN >gi|343385309|ref|AEM20799.1| hypothetical protein, 164913..165725 [Brachyspira intermedia PWS/A] MNPFNSRSKYYYNANKNQNYPDIDMPSYSKDDTTDPFNSKEDWNRIDYKFNGNELYNYFMKISFEVTTVPVYSFFIPNDGREWKKNTKSDYDEYTFDASDDGNTTESPLFPDRPLSISPMTVYRYGKNPLVSSDGFYNSSERIKRFFFIRAEGTAGVKLDNYLIAIDTYSKFIFAYAKITKYSDILGQLLPTDFEAIEHYHQKRKFYEYDPIGFIDKNKNIILYQVYEDDMTANSSKYVPRYTGTGGKAAEQIDKTTTGHSPYAIEPANQ >gi|343385310|ref|AEM20800.1| recombination regulator RecX, complement(165726..166334) [Brachyspira intermedia PWS/A] MKLKGDKIHIKVSGGDVFTIPKNGLYELDLYEGMELEYDEIPHIRFRAFESAARKSAVSILKRGFISEGMLREKLTKKGHKKRFIRHAVNYCKEYDLIDDKRFVKIAINSLKLKGKSKRHIIDYLKKNKVKPSLIEKAQNSISDRIDDKALKDAIRKYYKLYEHKERKEDYIIKTLMRKGFKYDRIKTLVRKYIDKKENYKE >gi|343385311|ref|AEM20801.1| hypothetical protein, complement(166670..168286) [Brachyspira intermedia PWS/A] MNEHDSKQRYLGEFYTPLNFAEKSLSYIFDVIDKKELENGNYRIWDMSSGTGNLEYYLDEKYHKYLYMSTIDENDIEYSKEKFKNACLFQYDYLNDDIKDNDFEYNKLPQNLQYDLNNKDIKWIILINPPYATSQVAGTNSKSKKNVSISKIRDLMHKEKLGDASRELYAQFMFRIHKEFRNNDKVYLAIFSKTNYIKYNNNEKFRNKVCNYKFLNGFIFSSSNFDNTSKTTPFPVSFIIWEINNNHNIKTENIILDVLDDNCNIINKKSYNVIESDNLLNKWIKRIKTSSTFVPLSSAIKVKTSGKDIRDKVCEGFIGSLMSCGSDLQKQNLTAIFSAPQASAGSLSITKENFEKAMIIHAVRRTAKVDWLNGSDQFCIPKNELNRKFILDCVVWTLFSTSNQTSSMDNIFYKDKYYTIINHFYPFDYKKVYSGCTFFKYDNEKRFCFEYLENNKDYISDEASELMNSAEELYKYFYSNIEKINKEKFKISLWDTGFWQIRKSLKDVKLASDILKEIKIKRNILKKKISENTDDFIF >gi|343385312|ref|AEM20802.1| peptidase, complement(168327..169430) [Brachyspira intermedia PWS/A] MDKYYLEETSKDVKNLAKQFVGNFKDANKSADNSNSRFDINYKKNVKLTPSSRYKAPRAKIKFNRTKKILNKLYNSTYGIRHVFKSVVGAIKRKGNHERSILIFYDDEEHGVRLPINNFMILFLVLVFSALIYTGYDAYIRQKEAREFYNTLSAREAKTYTLIEDYKKSLNRFSKALTEYNNVIKSISYIIDYNDMGTFNNNNESGNIDKMLSELDSYQKNILSFMEVSPKIHKEIPLGWPVAGGGRISSGFGARLSPFNQEKSYHYGVDIAGPYGTPILAVADGTVTFAGWRNGYGWFVLITHANGYQTAYGHNSKLLVDYGQKVKRGEKIALIGNTGRTTGIHCHFEIRVGGDHKNPMPYLSARF >gi|343385313|ref|AEM20803.1| Holliday junction DNA helicase B, complement(169492..170529) [Brachyspira intermedia PWS/A] MDKESITNAEENSYDKPNNNIRPQGFDDFLGQKNIKSKLKVFIDSAKKRDVSLDHILFYGPPGLGKTTLAQIIANEMGSNIKATSAPIIERPGDLASILTTLGEKDILFIDEIHRLRTVVEEVLYSAMEDFFVDIKVGEGTSAKSFRVKLPHFTLIGATTRSGLLSTPLYDRFGIVERLEFYTNEDLANIVKRSSEFLNIDITDEAAISIASRSRGTPRIVNRLLRRVFDFATVHDVLKIDEEFACDSLEKLGIDKNGFEALDKLYLNTIIKHYNGGPVGVDTLSVSLSEQIETIEDVIEPYLIQCGFIKRTPKGRVATNKAYGYLNLSSKYDDNYEEERGLFDF >gi|343385314|ref|AEM20804.1| putative methyl-accepting chemotaxis protein B, 171142..173055 [Brachyspira intermedia PWS/A] MVIIVPFIIMLVISNLFNIFSVNNVTKKLSYKVLEESAKGEAAKVQSIVQEAFDSLSTFEYTIDNLYRSGERNREVYKNTTKDFFSTLPDNTGALFLIFKNNVMGNDADYINDPNYSEAGGMFSDYVYRNNGSAADRGMTREELKSDYYSVPVTTGNINITSIYDFEVGGKMVKMNTWSIPLKNNGEIIGVAGVDIFIESLAPIMDNINPFENTLTSLFDHNGTLLYNKENETYVGKNVYEAYPYYRDNNVLESIKAGQTVIFEDFSATLNTKSTYIFVPIKLETGQNWGMKILVPNYVILEDSNNIRNIMIIILALILVIVFIITPLIINKKVVFIIKLLAQDLTKLSKGDISWDTPPGFTELKDEWGDIARAIKSILDNLNNVMNTVKESSEQVESAANEVLSGNNDLSNRTEMQASSLEETASTMNEMASNVKFAVSDIYDSTNMVVEAKDYVGKAGKIIEESVNKMDAVYESSSKIMDITKIIESIAFQTNILALNASVEAARAGEQGRGFAVVASEVRNLAQNTQESVKNITSLIVDSNDKINLAAASVNESKDIFNDISDRMDKVSDLMQKVNIAAKEQENGIGQINVAINEMDSSVQQNAALVEEASSSSQLLLNEAQNLNKLIDFFKLR >gi|343385315|ref|AEM20805.1| ATP-dependent protease La, 173396..175900 [Brachyspira intermedia PWS/A] MAKDKDKLDNNKNIDNNKNKKEDNTVAIVEDKLPSRLIIIPVMGKPLFPGLYAPFPIPAHHADAVNKAIAENDGFLGLNLYISDTPSEKKTPSVDEIYKVGVVVKVFKKLNLPDGGLNLLINSIRRYKVIKFVTTDPVIRAEPLYIPDIDPFRNEKEAKEIKAYTRALLSDIKAISENNPLFTEEMRLTMVNVDDPGRLADFVTSMLNVERASQQEILETFDIQERLEKVHLLLQKEREISEIQQKIQGSINSKVQKQQREYFLKEQLKEIKKELGYDTDPKQRDIEKYKKTLEELNVIDEVKERMEQEIEKISTIDTHSPEYTVSKNYLDTLFALPWNKENKEREDISKSKKILDRDHYGLEDVKERIYEFLAVRKLNPEKKSSILCFVGPPGVGKTSIGKSIAEALDRPFFRFSLGGMRDEAEIKGHRRTYIGAMPGKIIEALKIVKVKNPVLMLDEIDKLGTSFQGDPSSALLEVLDPEQNASFRDHYLDLPFDLSNVLFITTANTLDTIPRPLLDRMEVIRLSGYIMEEKLKIASKYIIPRQVKAHGLDIKNIKFTNKAISTIIDGYAREAGVRNFERRIERICRKIAADIVEHNKKTYSYTVDEKDLEKYLKKPIFTEDFTEKDLKPGNSIGLAWTSLGGATLTIESIKVSEKKDSGNIQVTGQLGDVMSESVEIAYSYVKSVAKDYGVAENYFNDAMIHLHIPEGATPKDGPSAGITMATALLSLSMNKVIRNDTAMTGELSLNGKVLPIGGLKEKTIAAKRLGFIKHIIIPYENIRDLDEIPENVKKGLAFHPVKDVKEVFDFMFKLNKLNKSENKKSSKKTYKKSK >gi|343385316|ref|AEM20806.1| inner membrane protein, 176613..177992 [Brachyspira intermedia PWS/A] MIKNFNEITKTLGFKILIIVILGLLLLIPMSFINSVVRDRISYQREAVSSIIEPVGSSANIQGIVVAIPYLTRVIDSETKEISYIRKYIFYMPNEYNVTGDVEVSSLNRGIFKAPIFNSKLNITGRFDKYNAEIYNLDENNDTILYDEAMIILGIGNKKNLMKLPTILVNENEELKYYEKNISIALNMFNNKFFYTISRDRILNGFDFNITMDIQGGNSLIITPLASENTFKISSKWKDPSFTGGFLPTKREVNNDGFNAEWNIASFNTAFTKYWTSDENANRADNIDDTQYFTADQNLNRSSNNVLISFLLLNDNYQKTSRSVKYAILFIFIPFFVLFLCEVLSKKRIHPVQYILIGIANAIFYLLLLAISEHINFNISYFISALMVTALTSIYIGYIIKSPKYTISMAIVEALIYIFLFGILQLTDYALLMGTLGLFAVIALAMYFTRNVDWYGENN >gi|343385317|ref|AEM20807.1| hypothetical protein, complement(178443..179375) [Brachyspira intermedia PWS/A] MNKNNVYRNAKIEGRSFFGIIKNSSYFLSNLAIYEDGIVSAWEKFDIYQFEKALERKWVVSFIEDNEKLDIHGIGNFKILESQWLHKDDYYEYIKSILKEMNPEMQNIYKTTKREIEKLEKLKVSFMANPIDFKMKGQFGYDLSDGKSYFIFRKSDNYSSSKEIFLTCYAIYDDETISIYNDDNIYSFDDIKNMFEKNELLLYPKEDDTIIIENLAKLKLKPTIKYTNKKEKLKEIEENIKEISGKENAFDYAIKCYHNYLVYPSDYNRELLKEAYEKVPKHERMFLGNMDDKDSDFRRIIYTPNIKREV >gi|343385318|ref|AEM20808.1| hypothetical protein, 179797..180210 [Brachyspira intermedia PWS/A] MTKHINKIIILIVSVFILSCSNKVTNPGNKVTISKRKGTYEGIAIRPTFRMRIMFKLDDQANIIYLERSSGKPVITEDKKINISTDVYSIATEFSFVLESTTYTIQFNSDSEISGGKLLENNSSTGENNNYDLTKIE >gi|343385319|ref|AEM20809.1| integral membrane transport protein, 180496..181806 [Brachyspira intermedia PWS/A] MDKFFKLKEYGTNVKTEIIAGFTTFMTMAYILAVNPSILSATGMDKGAVFTATVVSAIIATLIMSLLANLPFALAPGMGLNAFFAYTVVLGMGYSWQTALTAVFIEGIIFVVLTIFNVREAIVNSIPVNMKRAISVGIGLFIAFIGLQNSKIIVNNDATLLGLGNITSGSALLAIIGLLITAILLAYNVKGAILLGILITTIIGIPMGLTKMSPDASLVPPSLEPIAFKLDFSNIFTPNMFIVLFTFLFVDMFDTVGTLVGVCTKADMLTKNGEVPRCKQALFADAVGTVVGACLGTSTVTTYVESASGVAEGGKTGLTSLVVAILFAVSLFLSHIFLAIPSAATAPALIIVGLFMMTPILEINFNDYTEAIPAFICIIFMPFAYSIAEGITFGVLSFTILKFVSGKNKDISLLTWILSALLLIKILMPIIQGFLG >gi|343385320|ref|AEM20810.1| aspartate-semialdehyde dehydrogenase, complement(182036..183133) [Brachyspira intermedia PWS/A] MKKVNLCLLGASGAVGQEMLKVLEERKFPINELRLLGNREAGKKVKFNGKEYTIEKTTKDSFKDMDITLVAVGADLSKKLSPLAVKAGSIVVDNSSAFRMDKNVPLVVPEVNPEDVKLHKGIIANPNCSTIIALVALAPLHKFGKIKRIIASTYQAVSGAGKEGMEELEQQIKDYVAGKKLKNSTFKYQILHNLIPHIDSFDKNGYTKEELKMTNEGRKILHTPDMQISCTCVRVPVIRSHSESITIETEKKITAKKAKELLSKAKGVKVVDDPAKFKYPMPLDTSNQDNIYVGRIREDISAKNSLVFWCAGDQIRKGAATNAVQIAELLLPELEKKSDDNSSEKKAVAEKKPARKPCVRKSTKK >gi|343385321|ref|AEM20811.1| putative periplasmic protein, 183773..184372 [Brachyspira intermedia PWS/A] MTIKKALFILFVSAMLTGSLFAQYDGYYDNNQGGGQGGYQDPYGQQGGGQGGYQDPYAQPPAQQNYQDPYAQQGGQQQYGYGVQLSSIPQNAQNFIKQHFPNIKVTFIERDWEDIEVYLENGTQIDFFPNGDWKEVKCYGNMPATILPANVMNTIKRTYPNAAIVKIEKQFTIFEIKLNNMMELYVDNNGQLLGQKWDD >gi|343385322|ref|AEM20812.1| putative periplasmic protein, 184421..184672 [Brachyspira intermedia PWS/A] MKKILCLLVALTVLSTSALFADWYVPLNQVPQAVIATAKRTYPQAEIWAVEMEHYNVYKVKMNNMMELYIDKSGQLLGQEWDD >gi|343385323|ref|AEM20813.1| Malate/L-lactate dehydrogenase, 184828..185832 [Brachyspira intermedia PWS/A] MVIVKVNDLMQKVYDKFKAAGVSNEQAAIVTDLLIYADLSGIHSHGVLRVEHYIERIKAGGINLNSKFNIEEKRPSFALMDADGGFGHVATQYAMEWALETVEKQGIALIGIKNNSHAGALGYYNKMAIHQNKVSLIMVNTDPCVIPFGGKRPFFGTNPISYGFPAKKDFILGDMATSEVSLGRIFTARENNETVPMNWGVDENGNPSSNPNEIKYVVPFGGVKGYLIMTMVEAFTGLLIGQAYCNNLVKMYGDMDKKRNLSTFILVVDPAVYNDLDTYLNTVQSFIDDIRKEPALKEGETISIPGERKEACSADYLKNGIPLSEHVYKYIFDK >gi|343385324|ref|AEM20814.1| DNA alkylation repair enzyme, 185851..186519 [Brachyspira intermedia PWS/A] MSDLYTTLSKEFEKLKNEKEAIFMAKYMKNNFEFLGIHSKERKEAQKKVFKTISKDEKEFIDFSFTDKCYENKYREFQYASLDYLNSKKKYLNKNHIEKLKEYALTKSWWDSIDCLDRIIGSIALRDESVNNILLEWSLSDNIWLRRIAIDHQLLRKDKTNTELLEKIIINNLNNKEFFINKAIGWSLRDYSKTNPDWVRDFIERHKENMANISIKEASKYI >gi|343385325|ref|AEM20815.1| TPR domain-containing protein, 187058..187831 [Brachyspira intermedia PWS/A] MSSEKYYEEGLNYFKERKYKEAIESFDKAIELDPNNSNTYYNRGITKVNLGQYEEAIKDYDKAIELNPNDSDTYNNRGIAKYNLGQYQEAIKDYDKAIELDSNDSDSYNNRGIAKKNLGQYKEAIKDYDKAIELDHNYSSAYSNRGIAKKNLGLYEEAIKDYDKAIELDTNDSNAYNNRGLAKGSLGQYKEAIKDFDKSIELNPSYSDVYNNRGVSKENLGQYKDALKDYKKALELDSNNNIAKNNIKNLQNKYGLK >gi|343385326|ref|AEM20816.1| hypothetical protein, complement(188056..188178) [Brachyspira intermedia PWS/A] MSKAKNLIIAWAGTKISNQAIKIINVIIQNEAINFKGRGM >gi|343385327|ref|AEM20817.1| hypothetical protein, 188633..188938 [Brachyspira intermedia PWS/A] MFLPNDIKDNIKNYSKTNFTSEENYAFGRLIEIDKSGGDLIEIFNYTGNIPNDKDDIIKSGLMFDPLHISMAFTKKRWRFIFEELNYDRERDSNYSKIIFY >gi|343385328|ref|AEM20818.1| conserved hypothetical protein, complement(189086..190258) [Brachyspira intermedia PWS/A] MNCYKISQLYFKRGKTMLEYKCDKCETELGYKGLCFKCKAEEERNKTLALTDDEIKEIINKYIKDLKEKNVDKELSNGIYIYDLIAYRNIDLKDIAKKALEKKIYYPEVFYYKASEEIRDELIKRIRATKDYSEGANLLSCLAMQGDDVALDCLYDFEMNPREWRKKLYVDSSVYAECAGWTFDKDKKRQILNFDKCYYLDKAQIKEEKEKSPIKIASLRDENCPECGCRNMDMAIIDGRDERLKFIGVDGIIKASCCPNCVIYNTTYSKYDLKGGSEILPFDKESENYYASEENYIEEEELNSMHNNNYILSKNEVPLFYGAFDDTLNTIGGFANWVQDWEYMKCPSCGKKMKYLMQIHWHTIESMAEGTLFIEICTDCNITAMLHQQT >gi|343385329|ref|AEM20819.1| methyl-accepting chemotaxis protein, 191051..192853 [Brachyspira intermedia PWS/A] MKRGLMFKFLSIFSIFLFAAFLAILFIYKPIYKAKFLKEKYFQTLNSKNETEAYVKEIKNTVNLIVNNLEANPDLETFGNFITNVQKTGSGYLNMYFGDTVPYSEGGVYINTLEEYPRTYNQISRPWYKDAIATNDIAISDPYIDFAVNELTVTFSKAIYTNGKLKGVFAIDFADMNSIMKDIKENFDESFYIVSPNGIYMTHENSDYVLEENKNLFTDPLFTSFKGNLISHVGEVKVVGNQWYAVQKTDNAPWILIFKGDASELNNQFMILMLVIFVVMVILLFLEGFLVYKIVKPLKNTIKIIDLMKEGNFNSVFNKEDLALKDESGHLVNSVNDMQNKISSIVSEIKMNMASINNSSGQISNGIDNLSDRTSSQAAAIEQVSGAIENLFSSISETSKHTNDVKEMSNKVADSTKLGVEAVTQISNNMVDISESSKEISDIIKLIQSIAFQTNILALNAAVEAARAGDQGKGFAVVATEIRSLAQNVNDAAGKITTIIENTVAKIETGDESVKHSLEILLNIESSANEVSEVLTNLYNAVSEEEGSVKEIALAMNELNNITQENADLVHNSAILGREVSNNTESVYSELEYFKLHKIG >gi|343385330|ref|AEM20820.1| ATPase, complement(192901..193797) [Brachyspira intermedia PWS/A] MEKVQIENVELTLSHPDNLNIKWTGQNDLVRQIMASWHLISEDDIPLNPRIVGKPGAGKTTLSYYVGKELLNRDVYIFQCTVDTRPEDLIIIPVISENNKISYHASSLVTAMIKGGVAILDEGNRMSEKTWASLAPLLDDRRYVESVIAGIKIKAHPDFRVIVTMNDDASTFELPEYIHSRLQPTIELPFPDVKEEYDILKMNLPFADDEILKITVGFLQKSHINNASFSVRDGINMARYAMKLYKSNIASSRDTAFLIALKSVLGTEGLRILSLNMDDRDNKDRRRNMDDDDGTNIL >gi|343385331|ref|AEM20821.1| hypothetical protein, 193997..195004 [Brachyspira intermedia PWS/A] MLFISCKNNNQNSSSEKNKNGSEIQESKFYLLEGSISGEKADMYLYVNEKDKKVSGYYYTKNKKSVITGTINNKKLNLQEVDENNNMHASIVGNLSDDIVLSAEIKYEESEEVKDMEFSLNRNLPVYYADIIDYYKNESISNSIFSYHRTLFLFSKSNDMNSVDMESSINYVEEECDNYYNEWKGLLDVSNTTYEIDNTINVGYIDNKIIALDNYSSMYTGGDYTAKANIQEVFSLESSNLITIRDLISDFNNPDLISLMRDKILETGYSKEDYYEFNSITLESSSFRILPNSINFVWQANDISPYSVGITEISFTFEELKPYVKDVSPLYYLFL >gi|343385332|ref|AEM20822.1| single-strand binding protein, 195089..195505 [Brachyspira intermedia PWS/A] MSGNANIIVIEGRLTKDPTYMKTKNGKSLCKFSIANNRFYYTNGTLQKEVYFFDLVTWGYNADRAAVTLFKGRHVLVSGELRQNIYTAKDGTKKSAIYILALDIKNLDKKSIGNTSYTKTANNQIVSDFIEENLEEVF >gi|343385333|ref|AEM20823.1| thymidylate kinase, complement(195474..196085) [Brachyspira intermedia PWS/A] MKGKLIVLEGIDGSGKSSIGMMLTDALNSLGIKSIYTFEPTHAYYGSKLRESMLSKDLKPEEELSLFIADRKEHIKHMIKPAINDGYVIVLDRYMYSSIAYQGAKGIDKEYIYNLHKDFILEPDLVFILHLNIETALNRIMEKRGFVDRFENKHYLEEVDKVFYSFNASYIHHIDASKTQESIKDEILNTIKESKILPLDSLQ >gi|343385334|ref|AEM20824.1| phospho-N-acetylmuramoyl-pentapeptide- transferase, complement(196446..197597) [Brachyspira intermedia PWS/A] MLYQIFYPLRESFFGFNLFRYITFRTAGAVATALILVLLFAPNIIEKLRKLNFGQVVRDDGPETHLVKTGTPTMGGIFIVGSILISVLLWAELDNLKIILLTVSLVILSIAGFLDDFLKIKYKNSKGLPGKYKIFFQTFVGIIIGVYLYYFDKSTFLMTFELNQGIGVLEAVKVAQVPSSTIFLPFASTIYIDLKILYIPFATFVVVSMSNAVNLTDGLDGLAIGLLIIMSMALAVLSYVSGNSLIATYLKIPFISDAGEVTVFVGALIGAGLGFLWFNAHPAQVFMGDVGSLSLGGVLGIIALFIKHELLLVIIGAVYVAEALSVVLQVFSYKFFNKKRIFKMAPLHHHFEKSGWKETQVVFRFYIIGIIMALIGIATLKIR >gi|343385335|ref|AEM20825.1| flavin reductase like domain containing protein, complement(197816..198613) [Brachyspira intermedia PWS/A] MNDFALTKLSYGMYILTTMDNDKPVGCTINTSTQITATPTTIMISVNRNNYTNECIKKHGKFALSILSEKSDSTLIGGFGFRSSRDNNKFENVAYEMKEGLPVIKAANAYLVCKVVNSFEVYTHTIFIGELLDADIFDNQTASMTYAYYHNVVKGTTPPNASTANAYKKEDSNSNKAVYKCKTCGFEYKGDTPFEDLPEDWVCPICGEPKKNFVKVEPNKNKSSAVYKCRTCNHIYNGDIPFEDLPSDWKCPICGEPKSNFEKIS >gi|343385336|ref|AEM20826.1| hypothetical protein, complement(199358..200593) [Brachyspira intermedia PWS/A] MFIASCGNKVTAPSVSDITYYEPNNAIRKTYYYKINDGKTDAMIAVEGTFKKLAESANAIIYVEESQIDKGITKGDILSFLREFENYIPKEIEIYGEIPDFDGNGKVIFLMANLNTNITTSITGGYFSANDLIYGKSGVPGEYLHINVPTSESTIGLMMHELQHLINYYNNAMLKNKAMDIWLNESLSESTSHLFSSTLTDSRINFFINNPYYSFYSWYFMYTDWSFVFTPGHVLLSYASSSMFMKWLDARTGGNFNIYKEIAHSDPSLTSEQRLLNITSKYGLGNDMDTVLLNWIEGVSKNEVQGLNIAPIDPTDKNFNQNGSIPLLPKSLVVYSTANNNISGNKLLTRQLGQTGLSVVINNSVNTTAGLANKEDVVNLTIKKADNLNSSIKYQRANLTDELFYIDKVID >gi|343385337|ref|AEM20827.1| hypothetical protein, 200755..201282 [Brachyspira intermedia PWS/A] MNKFRIDVIVFFIIKLLEVKMNKKVKYIIFIISVLIFISGCKNNATNPSTFEEIGKYRGTWVADKCEAIDFNTDKWIEKEYPISIEINNDTDVLIMNVPVDSVKYLKDTIDTFDLYVSVDKAPLLPPPEITGTVSEVYYRMAFNSYNSATMVMIIKTTDNINSSIFSLIRCSLKK >gi|343385338|ref|AEM20828.1| hypothetical protein, complement(201383..202717) [Brachyspira intermedia PWS/A] MKKSHIFLFIIFMFIISCGNKVTAPSVSDITYYDPNNTIIKTYTYSIKDNKDQSMIAKEGAFKKIAESANAIIYVEESQIDKGITKAGVISFLRKFENYLPREIEIYGEIPDIDGNGKVIFLMADINTNVTTTGLGGYFQPSDLINGKNGEPGEYLHVNLPVSDITLGIMMHELQHLINAYNNLMQGKSMDIWLNEALSESTSLIFSEPIAKEREYIFNTSTYYSFYTWNLVYTDGTPQGTVPVGGYGNILMSYGSSSIFMKWLDSKTGGKQEIYKEIAHSPSAPTSEQRLMNVLSKHGFANDMDTVLLDWIADINNGVVPGLKLSAIDPTDPKFNINGKIPLLPKSLVVYSTADNPQITTSGRLETRPLGKTGLSVVINNSENQGQNLAAAVIADKANVEELTIKKAANLNSSIKYQRFNLQDREYFIDKVITEEDEKNIKKQ >gi|343385339|ref|AEM20829.1| hypothetical protein, 202843..203382 [Brachyspira intermedia PWS/A] MNKFRIDVIVFFIIKLLEVKMNKKVKYIIFIISVLIFILGCKNNATNPSTFEELGKYRGTWVADNVYMLDLSNDQFLQSGNGMTIKINSDTDTVIDNIVPISIRHLPDTVDSYYLYISTDDVPPQYLSKITAEGGQVNGAYYKLEFTSHNSLKIYMILQCRAGLNPFNLVIQKADLRSN >gi|343385340|ref|AEM20830.1| hypothetical protein, complement(203461..204765) [Brachyspira intermedia PWS/A] MFIISCGNTITQPSNSGEVIGDITYYDPNNTIIKTYPYNLYDGITGTFVGAEGAFKKIAESANAIIYVEESYVDKGITKEGVISFLREFEKYLPREIEIYGEIPDFDGNGKVIFLMANINTNEATTAMAGYFYQSDLIFGKEGVRGEYLHVNVPTNNDTVGTMMHELQHLINAYNNLMQGKAMDIWLNEALSESTSLIFSEPLIGEREDIFNTSTYYSFYTWKLLYTDNTPEGTVSVGGDDNIFISYASSLMFMKWIDLKTGGKQEIYKEIAHSDPSLTDEERLMSVLSKYNLGNDMNDVLLNWIEGINNGDIPGIKLSAIDPDDQKFNINGSIPLLPRSIVLYSTADNPQITSGGKLLTRPLGQTGLSAVINTSVNQESYEGIAETADVENLTIKKAANLNSSIKYQRFNLQNRGYFIDKVITEEDEKNIKKQ >gi|343385341|ref|AEM20831.1| hypothetical protein, 204990..205448 [Brachyspira intermedia PWS/A] MNKKLKYIIFIISLLIFISGCKNNATSPSTIYGIGKYRGTWFADNFDMLDLFRNQWVQSETGMTIKINSDTDMVINNIVPTSIKHLPDTVDTYHLYISTADVPPEYPSSQIVKAYYKLEFTSYNSVKVTMVIQFIMDGNSINMAIQKAELKK >gi|343385342|ref|AEM20832.1| hypothetical protein, complement(205837..207147) [Brachyspira intermedia PWS/A] MKNIYIFLFAILMFIISCNKPTTSPSEPISEIINGITYYDPATAETKEYPFFRIDNVTGQNIFVKNTFKKLAVSKNAIIYLEQGINTITKDKILSFITKFEEYYPREVEIYGQPSDFDGNGKIIFLMANLNTNTAGGSFSTGGYFNPLDLSIGKGGIAGEYLHIDVGNNIDYGIGIMMHELQHLINKYVNGIKKNKAMDIWLDEALSESTSHMFDKEMVNMRAKAFNDTPYYSFYSWYFQYSKNNDIFTKPMYAASYAPVSMFMKWVDAKTGNNQEIYKKIASSSLTDSEQILLDSVKTLAPSLGNDMDTLLINWIKGINNGDIKDISNAPNISDLASSKSYEEFLINGQTQLLPKALIVCSKQDSDKITDSNIRKEDLGNGNYIVLNTRKNASAGFTSASDIVPISLTRTAVRNNNVSELTMFKKDYFTDIVITE >gi|343385343|ref|AEM20833.1| hypothetical protein, 207348..207782 [Brachyspira intermedia PWS/A] MVISSLFFILSCKNNVNNPNVYFQDQPITSYSGTWKGDIYDTLYNEQPLFLATIIINDDGSINYDGDIVAKEDIISKGNNTFEFILYDNLTLGNQIVALRYVNTLKITDNYTMNCFGTIDMKSGVSEEVWDTFMNTSGTLQKQQ >gi|343385344|ref|AEM20834.1| hypothetical protein, 208162..208686 [Brachyspira intermedia PWS/A] MNKKLFSTLFIIVILASFSAIGCKNPNTDPTPTGTDIGEKYAGTWYLNATMKVEFGNPAPQNADQIIAEFAPQLDGTAVKNDQIIINDDGSIKDSAGDIIQKTDIVKEGDKYIVKLKNDYPNLPQDIFPEAGMEITFNADGAGTVATYLVMNLNNNYYNFYLFKDGKLTKNPVQ >gi|343385345|ref|AEM20835.1| hypothetical protein, complement(208779..210077) [Brachyspira intermedia PWS/A] MFIISCGNKITGPSENIDGITYYDLSHAETKEYPFLKSDVITGAWIDAKSTFNKVAESQNAIIYLEKGYNKMTRDTIMSFVKQFEEYYSKEVEIYGNPSDLDLNGKIIFLMGNLNTNQTKEKPGIGGYFYGSDLTRGKGGVKGEYLHVDPSVANEDYILGVMMHELQHLINFNVNYFNTGKEMDVWLDEGLAESTSHIFSKEISDSRLKSLDKVPYYSFYSWYFKYPIDGSDANIFGTPMDFASYGPASMFMKWLDIKTGGNQEIYKKIAHSSHIKDGEQRVIQCAQELNPSLGTDMNTLLIDWIKGINNGEVPGLSIKNFASTSDNYYNLFLKNGKTLLLPKALIICTAEDANKINDTKIIKEDLKNGNYIVLNTSQNQYAGYSAESDIVSISLTKAAVPNSRYNNITESTIFKDNYFIDRVITEKDIIKK >gi|343385346|ref|AEM20836.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA, complement(210212..212080) [Brachyspira intermedia PWS/A] MRILYMNNNKYDVIVVGAGHAGIEAALSSARLGMKTLIISINLDTIGQMSCNPSIGGVAKGTIVKEIDALGGEMGKLIDKTMMQFRMLNRSKGKAVWAPRAQADKYAYKEEAAKTLYAENNLTLHQDIVTEIIVENNVLKGIRTERGREYECQAVILTTGTFLNGLIHIGKYQKQAGRIGELPAIGLSDSLRSLGLEVGRLKTGTPARVDYYSINFDILEMQKGDDEITPFSFLDEKIDIVQEPCYITYTDANIHKIIQDNIHLSPMYSGVITGIGPRYCPSIEDKVVRFADKPRHQLHLERESYRTNEVYINGFSSSLPEEVQIKMIRSLKGLEEVRILKPAYAVEYDYVNPIELKPTLETKKIEGLFLAGQINGTSGYEEAACQGLMAGINASLKIKKEAPFILKRSDGYIGVLIDDLTTKGTKEPHRMFTSQAEHRMLLRQDNADERLTELSYNIGLASKERLEKVRDKKQKTQILVEYLNKRTLTQKETEDLGFTKEAKEYRTMSLASIIKRPECGIDMIKHLIDGDYNKNVLENAEIAIKYEGYIARYLNEIRDIEKYENMLIPEDFDYSTLKSVKIDAINKLKQYKPYNISQALRIPEVDKSVVHILILALTNKKK >gi|343385347|ref|AEM20837.1| putative segregation and condesation protein B, complement(212718..213389) [Brachyspira intermedia PWS/A] MDEMIETNGALLENEISEKNSENNADTQAVNTENKNALEIDDSILANEEELEKIMEAIIYVEGNVPISRLRTLFKCENSDIRTHIENINNRYRNAKSAIEILEVGDSILMTIIPSTFGTLSAIYDKKRKKKISKAMLQTLSIIAYKQPLTKAEIDDIRQSDSGYHLRALMEDGFIAWKGRKDYLDKRQTYGTTDKFLMHFGINSLDDLPKLRELKDLEFNKDE >gi|343385348|ref|AEM20838.1| hypothetical protein, complement(213523..214257) [Brachyspira intermedia PWS/A] MIYCKDLILEYKNKKVLQLDELSINENGIYILLGANGSGKSTFIKSLIMDSSVKRSGIINVNNKTLSKEVIFNDIAFMPQFLNVNFPFRAIEVVMMGHKEYGIFSDEKKIRTKSLEVMESLNILHLQNRNVENLSGGERALVFLAKTLCKNTNIILLDEPDSSLDFQNKVKLFHYLEANKKNKIIILSSHDIVSITKTDYIIKFSKNSNYNPIHKKDINKNELKDIFPDVNYDEILKDISSIIN >gi|343385349|ref|AEM20839.1| hypothetical protein, complement(214280..215272) [Brachyspira intermedia PWS/A] MKNKSLIILSSILVILFILSIFIGSWDISPLEIINIFFNKTEDINKAIAILNVRLPRILLAVSSGAILGVCGVICQSCFQNPLVDPYFLGISSGSAFGAAFAIVFSLPIFLIAPLFTFIAVLIPMFFSFRSSSVLKLLFMGIVINSVFSSGLSILKVAAEIGKLREITFWLMGSLGNTNIRYTLILLAVFIIALFFFLMQSSKIDALTLGELHAYDKVKDIRVFRIQLLFVVSILMSMSVLATGIISWVGLGVPHLSRIIWKTSASSKLLINSAFGGAILLLLCDLVIRSIIKMPLFGGRIAGELPISVATSLFGAIFLFVFLFRRSKYD >gi|343385350|ref|AEM20840.1| hypothetical protein, complement(215277..216401) [Brachyspira intermedia PWS/A] MKKYLLLILFTALSFISCNNTKDANNKNNSADTITVTDAFGRKVTLKKDIKKIISIDRGFIPQTLKALGKDDLLAATGGVYPQSGPYNTDRSDNFYIVTNILSIPNVGWAGYGSYNFEKILEVSPDAIIIVPYGSLSENSYHQELINRIENEFKIPVIILNDHTIATNLNSYYDNIRIISKVVNAEDKSEELIKKLQEYVDLASSFKKDNDTDKMLFLGLTDSETGAGYVHGKDYGGAAYTTSILGISNAYEKSEMPILGAEEILEMNPDIIAMIDSPQYSKAVETYTKNAVFQNINAVKNNRVYSMGQILWWSDPKLLLPVQLLLFSYIYYMPDNVNIREVYDNYMSDIFGIEETDKLIVLHKLEPFFEQIKN >gi|343385351|ref|AEM20841.1| TPR domain-containing protein, complement(216548..218854) [Brachyspira intermedia PWS/A] MYNTKMENLLNEVSYRLNNEDYHQTLEILDVILKKVPKNYRANLYKGQVCVELKEYEDAVRYFEEAKKVDIKTFKSYNLLGISYHAIKQYDKAIECFNETLKITPNSFKAYNLLGISYFEKKDYTNAIENFNKAIEINPKYDKAFNNLALFYYKNKKYNEAIEFFEHSKSLDERVFKAYDMLGMSYYNINNYEKAIECFTKFLQYNGKSCKIANTLGAVYSFLKDYDNAIKYFNIAIDINPKYANAYNNLALVYFNRKMFDKAALYFDKAKKLDINTFTDYNKLGISYYSKKYYYEAIECFERVIEKNPNAYKAYNFIGICYSSNEEYDKAINYFNKSIEINDRYYKAYNNLALAYYNLEDYNNAIENFNKAIDINNNNADSYNGIGLSYYYLGEKEKSLIYLNRALELNPSYSNSYEILFNLYFDLEEYDNALSIADKIIEVNPNSFKHYDKLLSICFDNKDYNKVIEYASRIDRRDDDIYNMLAQSYYRIKDYDNASICYNKLIESKKSSFELYNNLAVIYYLKKDYDSLLDTYNRYIDNFDLREDNFASYNIFLLSYTLLKGNIIKYNDFLDLFEKSLNKTIEFHNIHKNNSSCTLYKNINYNTDTLKLLLDKKTETENIFNILENSMEAGKLTAIKPVIEHFNNKMNIYFASFNSSINNLYDNSICIEYEASDSIIIKTKNYNKEENVYGRTAKFITKEDNIHYDTLLSIFSYNSEDYAYRAILNNNNIKIKSIYFPKNFDDSNIEIIRRIINDESIKLCKLDN >gi|343385352|ref|AEM20842.1| hypothetical protein, complement(218930..219100) [Brachyspira intermedia PWS/A] MAKAIDGKANKAIIDFLADELNIKKRDVEILKGEKNSKKLISININDDDLKKYFNK >gi|343385353|ref|AEM20843.1| hypothetical protein, complement(219181..220722) [Brachyspira intermedia PWS/A] MPNKNQMYINKLFETFNNRGRQLKQHEILKSYLLSKVNNRDIYSRIWDSCSIMDNYIEKNLKDILKIDNETLRKLVNANDRGKADEKDVGVSENIEEYLKSIIKETENQDNLKSKRGLDFYDILNLKRNSDFEDLDNQFENDLYNDSESNYEAPKIRSIISFPMLLLHTLRIFLIENKIAKTVDVKEKELINIFKHIFDDDNISKKTSYFFKLLWKIRVLFDKYVIKFVSDNEDGEVLSICNIIYRKNSRSIERRIDKNNKALSMLQSILYYTQESITQYWLTPFLYQCIKINDANELYQYLMKLDNLLYFYKIKKSKTLSEKTIEISAIDIDGYYHDNTKTKNMIKKLKEELQNLNYYGCNRYWFYKLEFILWYNYYNNIDSNIFNQNDDNINKKIKEILNKFRITSKNSIEHVYPQNDTQLSNDDKWSDETKEECLNSFGNLVLISGSLNSELNNKSYKFSILRDKLKKGEVQSLKSLLILKNNKWDENACKEHLNKVIELYKEYYEKYTK >gi|343385354|ref|AEM20844.1| hypothetical protein, complement(220935..221246) [Brachyspira intermedia PWS/A] MGNKVEAGKFSLNKIIDEKMYFSIPNYQRNYVWKEEQIRKLLEDIENAIINNNNEYYIGSLIVFYRDDDNNNRYDLVDGQQRFTTICLLLIQIKKLLITMNLY >gi|343385355|ref|AEM20845.1| hypothetical protein, complement(221248..221865) [Brachyspira intermedia PWS/A] MEGINFFLYTNKYNEIYKYLFDNNNEVSDEDADEDEIKKFHKLYTDIYKTNISKYLKSLFELLCVVYYDKYGEKDLFKFALYCDYLIGNYRILKARISKETIIKILKFDIEEKETDNLLDIIQMSFESDEIIKFIDKITPKIKENIDIKKSGVISKYIISYSNFIKDKGIDINITWMKDKKRINYKMDKLKDRKNSILKIISKGQ >gi|343385356|ref|AEM20846.1| hypothetical protein, complement(221913..222719) [Brachyspira intermedia PWS/A] MVIPEYQRFYVWDKENVDDLLNDLKDFFLNNENEEYYLGTVILHNDKTNKKYNIIDGQQRILTLLIILYVFEQQKYNYVFEQQKYNIEGKFNNKITMQNIRNNYKYVKEYLDNNQNNKITLLNNIIFTEIETDSEDEAFIFFDTQNGRGVTLDAIDYLKSYHLRAIKNDNYRDIIAEDWDKNNKYDKKKKHNNLNILFNEILWKARRWTGRNIHYENIKEIKREFEKNTKHNDNDQCLYYTNIENIMYIDKNITKDINSLVFNIKEKT >gi|343385357|ref|AEM20847.1| conserved hypothetical protein, complement(222840..223457) [Brachyspira intermedia PWS/A] MNNINFDIQSNKDNYFESETTAYINPPKKIPFFLKLPIWIAKKKVKKDLLLPKILAWNPKTAISSGVMEALITHDDKEVPKRLLKLIRIQISIDVACPFCIDMNSFEYDKENVSDEEIKYLQNKDIDACPTLSNKEKTALKYISAITKTPVIISEELITEVKKEYSERAILILASTAAQVNYWARLIRGLGVPTAGFTNICKINK >gi|343385358|ref|AEM20848.1| TPR domain-containing protein, 223627..225411 [Brachyspira intermedia PWS/A] MENINKYLHEVDEHIKNKNYSEAFSLCNDILLINPNNIEAMFKAGYCCYRLKKYDISMMHFIKASSLEKFSTNKAIYKYYIGRCYYSLRVYKEALEYFKDAYNLDNNNKYYTLWLGITYSKIAVNNNNYNTALMYLSMSLGSEDYLVYGYIGYCHIQLKNYDKAIMYLNKSVNLKNNDYLSRYYLGNTYFIMQIYDKALEHLSESVKLKDDDFDNWFALGLLYKVIYENDLSDECFEKARNIALDSNDIDEELDCFIKLTDSQNDEYLNYLYLGICYAKLESYKNAVYYLLESIAINEKYNNENNYLAYYWIGYINYIDSEYEDAVKYFEKSLNLNDDDDENYLVLLWLGDCYFRLGNYKKALFNLKKSIEIKDDEAEAYKLISELYLKVGKKEKYNNYISKYKKLIKNANLYDNNTSKKHNDSKNISAVFEYNEDYNYSDNIYEKEEIVNNDEEMHSKKSDIYHFINILFQNIEENDLYNLYSSNTEKKSYIDFNDFNIDNYLSYRNIVNNAVKDNFDNTAKITTIKNIITNFDIKNGVINDSEIEHSKKVIDDIEELFNYTSECILNTMHYYYRKKDIELYLILMNIIENNL >gi|343385359|ref|AEM20849.1| methyl-accepting chemotaxis protein McpA, complement(225462..227312) [Brachyspira intermedia PWS/A] MSKFNSLAVKVPVILCIVTTILITIMLIISLTIAENGISKSRFEGFETTVMGYASVFDAWFRTQSYILETYASVPIIVEQVSNPNENSLTTLTSTLKTFREKNACAIHVGIVDRNGIVIADSDYPKWIGTRFTDSNINVWNKLHNKEYGYGSVSYGNGLAPSVVNGELSFIFAAPIKYENREIGYLYTVFNWREFYKNYIEGIKLGDTGGLDVIGPNMKVLMNTDYNKVNTDAPQVYKEVFDKKLSKGVVEYTANNHKMMGSYTKMKYVPWITSMTMTSEEIFAESRKAILSGIILGIITIVAIAIFINIFIRSITKPLSLVVDEAQKIERGDLTEFTGKIKPRKDEIGILADSFANMRHKLVETIKEVNDASICIMNASEKLAKGNMELSRRTEAQSASLQQTAASMEQMASTIKSSTEYSITGNNMMISSKSSIDEAGDIIIQTTKNIEEVYDASTKIKNITKIIEDIAFQTNILALNASVEAARAGDQGKGFAVVASEVRNLAQTTQSSVKDITDLVENAYDKINKATETAHHSQEIFADLRAKIDETANIMRGISSAAVEQQSGVEQVNRAVSEMDGATQMNNALVNDAENASKDLVAQANSLQQAMKFFKL >gi|343385360|ref|AEM20850.1| hypothetical protein, 227533..228525 [Brachyspira intermedia PWS/A] MNIFINGKELSVMLENETNAYEVLKPIEEWCNSNDFLINKIIIDNKEMQPYIDEEYETIPVENIQKIEVEALSQAEYSLYSIMSIVEYIEKVSNTVSVTAKDIEDLKDGMYWVLDSIPRTIFLFNMSLDSYGIIHILKMLEVKLEKFNNASDNIDKFNEFFNNEFKPFLTEKMLPTMYIVIEEAKINTIFLFAGNITGSNALYKVGSLPKFLPLILDILDSIVNKLQSGNDKEAFIYAEKFSRIVSYAFSILSNVASIYSIDYSQISLNSVTLTDAINDFNEMMNNVLDAFANEDYISIADLLEYEIKERIENIMNYIPLVEEHIEKLNV >gi|343385361|ref|AEM20851.1| Holliday junction resolvase helicase subunit-like ATPase, 228518..229813 [Brachyspira intermedia PWS/A] MFDFEEDINNFRPMAERMRPLTIEEVFGQHHILDKNKTLRKMIDNDKITSMVFFGPPGVGKSTVASIIAKKTKSEYIKLNAVLSNVSEIREAIKKAEKNLENRKKTILFIDEIHRFNKSQQDALLPAVENGSVILIGSTTLNPYFYLNNALLSRIMLFEFRNLDDNDIREAILKAITDKRGLGEDDVAVEDEAINLIVRYSHGDVRKAFTYLEASYLATQIDETKEKLTITEEIVRDVTSKQSITFDEDEHYNTISAFIKSVRGSDPNAAIYYLARMLESGEDPRYIARRLCILASEDIGLAEPNAMNIASSLVSIVDFIGMPEGRIPLAEVTIYLALCPKSNSAYNAINKAIRDIRNGELYSIPNYLRDNHSATFDKKSNEEYKYPHDYPYHIVKQDYLEHGIKKEYYEPVDIGEERELKKRYEWIIKHI >gi|343385362|ref|AEM20852.1| molybdenum ABC transporter, molybdate-binding protein, 230270..230998 [Brachyspira intermedia PWS/A] MFLFSCLKNKEEKDDIIIFASASLMSPLSEICTNYEKETGKKIGCTFDSSGRLRKQIQSGAYSDLYFSASTREMNALKSIDLLHNDSITNVLKNDIVLVVPKNSDIYLDSFWDLTNDYVTKIAVGESMTSSIGQYTEEILKKFDIYDIISDKIIYGKDTKEVIDLVKNDKIDCGIVYITEAILNNNNDLQIAAEPKTHTDIVYSIAVLKKSLKEKEARDFINYLFSDKSINILKGYGFGIVI >gi|343385363|ref|AEM20853.1| MATE efflux family protein, complement(231136..232524) [Brachyspira intermedia PWS/A] MAKEEKLLDLTECNVAKGLLILVIPMVLGNLLNVAYSTVDAIWIGQIVGSKGLAAVSISFPLTMVVTAIASGIATAVNVLIGQYFGANDKEYVTYISKVSTTVSLITALTLAILGYIFAPNLMVFLNTADSIMEDAVNYFRISMIGFPFVFYYTFVSALLRGIGDTVRPLIFLIISSVINIVLDPILIKGIGPIPAIGVEGAAYATVFAQAISVIVSMIYLKVKNSIVRANPLNFTFDFSITKLIIKIGLPFTLMQMISSISWIFLNKVINSYGELSSASFAVASRIDALSFVPLSAILSGIGTMAAQNIGADKMYRIKEIFNTGLKISLTIALIMTALCMLFPEYIIKIFVQDDNIMPYMKSYIYAGVPSTILVAIIFSANGIINASGKTFVIMLFTLFTHFLVRIPVLYLLSPKIGLWGVWISMSVSNFFNMVFHLVYYYSNKWQKNANLTLNSASKDDN >gi|343385364|ref|AEM20854.1| Na+-driven multidrug efflux pump, complement(232617..234002) [Brachyspira intermedia PWS/A] MEKDKMLELTEGNVSRGLINLVIPMILGNLLNIAYNIVDTIWIGQMIGPKGLGAIAVSFPIILILMAIASGVTVASNILIGQYFGANDKDSVIYVSRVSTTISLITALALAIIGYIFAPAMMRFLNTADSIMEYSVSYFRISMIGFPFMFYYFLVSALLRGIGDTVRPLIFLAIASVLNLILDPLMIKGIGPFPPMGLDGAAYATAFSQFVSVAVSMIYLKMKNSIVKANPFDLAFDLNITKLMFRIGLPFAAMQLIVSVSWLFLNRLINTYGEAASASVAVSMRVDSLSFLPLLALSAGIATMTAQNIGAGKMERVKEIFKAGMMLSVGISAFMAIFSVLFPEIIVRMFTKDMSVLKYTKSYIYVVMPSIVMLAVMFTANGVINGAGKTFMLMLFAFCAHIIIRVPLAYMISPKMELWGIWTAMAVSNFFSMSLSLLYYFSNKWKKDANIASHSAAEHNL >gi|343385365|ref|AEM20855.1| hypothetical protein, complement(234051..234167) [Brachyspira intermedia PWS/A] MNDFILFKLFSINNAIIKKLLIGFENNMFQAPIFMKTL >gi|343385366|ref|AEM20856.1| hypothetical protein, complement(234466..235134) [Brachyspira intermedia PWS/A] MRFMIMKKVYILLFLNFIFISCFAPSKSYFNVVSANKENDSIKVVVEAKKSGRQSENIFLVSQFLNDDDVIVNTSMSQIGPMMFDKGKYEFNVPLPTNSFTKYTNFIDEIEPESAQRVVNNRGYGNSFFTYMMLMNMMDDRRPTYYDDYGKRRTINRDYYDDKYTRTSTRRSIFNNSRSTTKKTTVDNNSSTTKRRTLFKPSSGSSTRKKSTFRRSSTRRRR >gi|343385367|ref|AEM20857.1| hypothetical protein, complement(235153..235536) [Brachyspira intermedia PWS/A] MILDEVKKYFDMVEYAELRALYEDDFQFEVLKNKEELENHIYDLDDDEKERIRNAVSNELRNNNEIVFYTSESAGEVYSSVEDFLVYLLNEILYQKLLIKSERKTLSNNFMELEISIKKLLILIWTR >gi|343385368|ref|AEM20858.1| histidinol-phosphatase-like protein, complement(235599..236420) [Brachyspira intermedia PWS/A] MTADYHVHTEFSDDSNYTLEKVIKDAIKLNIDDICITDHVDYGIKKDWNEIEIKDEKTISNVNYTKYIEDIKRMKEIYGKQINIKTGLECGIQTHTIDKYEALLKKYDFDFIIFSVHQVNDKEFWTQDFQRNKTQKEYNEAYYEEMLNVVKMFKNYSVLGHLDLIIRYDKKGVYPFEKVKPIIEDILKIVIKDGKGIEFNTSYHRYGLKDTTPSIDILNLYHKLGGNIITIGSDSHQPSHLGFHINEAKEILKDIGFKQFCTYDKMIPSFHNL >gi|343385369|ref|AEM20859.1| alcohol dehydrogenase, complement(236552..237640) [Brachyspira intermedia PWS/A] MLLDKNLEEANSGQRINAKGYAVHSKTDTFKPFEFSRHSMGDNDILIEIMYAGICHSDIHSARSEWHEGIYPMVPGHEIAGKVVAVGKNVTKFKVGDYAGVGCMVNSCGECEACKRSHEQFCERGQTVLTYDCKDHFHNDEPTYGGYSNNIVVSEKFAITVPKDAPMEKVAPLLCAGITTYSPLKFSGVKEGDVVGVAGFGGLGSMAVKYAVNMGAQVYVFARNDKKKKEALEMGAKDLFTSTKDVPVRFDLIISTIPTGYDVNNYVDLLKYGGEMAIVGLPPAELKQSIDLARLIFSGGKKVYGSMIGGIKETQEMLDFSLKHKIYPETEIIAANQIDEAYEKLTTGQAKFRYVIDMKTLQ >gi|343385370|ref|AEM20860.1| hypothetical protein, complement(238047..238283) [Brachyspira intermedia PWS/A] MKKIIFITLLSIIFTVSCTSFSITTSNDRKSYDKIEKTIDKAERKTERNIEKAERKNEKELEKAERKIQRELEKANRK >gi|343385371|ref|AEM20861.1| seryl-tRNA synthetase, 238472..239752 [Brachyspira intermedia PWS/A] MIDVKLIRENIELVEENLRKRRSKVSLDKLKALEHERLNLLKEVEQDRAKKNESSKKIGECMKAGNKEEAEKIKEEMKNFTESLNKKEEKLSQLEEAVNNEILYLPNMLSEDVPDGDDEKANKEIIRWGEPRKFDFEVKDHVDIAMGLDILDIERAVRMSRTRFSLMKGKGAALERALINFMLKKHTSEHGYTEYVPPILVNGRTMTGTGQLPKFEEDLFKTTDDPALYLIPTAEVPLTNIYREEIIPENMLPLYCTAYTPCFRSEAGSYGRDMRGLIRQHQFDKVELVKICAADKSKEEHEKMLKDAESILQALELPYRVVVLSSGDIGNAAYKTFDIEVWLPSQNMYREISSVSNCWDYQARRMQMRTRRNGKTELVHTLNGSGIAVGRTWIAILENYQQADGSVIIPDALRPFTGFDKIEKVN >gi|343385372|ref|AEM20862.1| TfoX N-terminal domain family protein, 239752..239865 [Brachyspira intermedia PWS/A] MPSSKDFLNIVLNKLDSLDDIDYKQMMGEYIIYYNKK >gi|343385373|ref|AEM20863.1| TPR domain-containing protein, 240447..242216 [Brachyspira intermedia PWS/A] MNDKEKQLKKIFKEIEKYDDGKHDYKIINLCDDGLKIDNKNPKLYFYKARSLYQLALYNKDSNKYLEAIKNFNIVFDIEPDNKVTHYNRGLCYFYLALNENINEEYLHKAIEDFDNIIIILHQFEKNIKTKNDIIVLNKKYDESYSIRALSYVYLNKYEEALNDFNMAIKYNSESGEYYYNRGLCYYKFAIKNNNDINYLKSAIKDFNKSIELNEKNYFVYYYIGICYYELKNYNESIKNYELSEKYCKYNYDKLSIQDKKIECLLKLNNKENEIYNLYKNIILNIYKEFDNETIIHTCDLFNISSSITENVLSLKNKIYVNENEIIDNNKNIINKAIQDDFYNKKYYYEIRNNSLYNYTRVNKDTLRSILNNTLWCSNTKNFNDPVDPYIRNVKKEEQNKFYDYLLEKIKIACLTTHNDNTLMWSHYADKHQGICIEYDINKILNENNDKILIKKISYNRKMISYDTFINKQKKSINSILIDDKTLNNITDIFTVKSKEWEYEDEYRILFYDEKNENSNGTLINLSIKSICFGVQTSKEDKELVYDIVNFINLKNENIDKYKKIELYEAHLDDNELFKINIKPYKHKK >gi|343385374|ref|AEM20864.1| Malate dehydrogenase, complement(242551..243837) [Brachyspira intermedia PWS/A] MSDELKTKALEYHSKGKAGKIEVMATKPCKTADDLSLAYTPGVAKPVLEIAENPNEAYKYTSKGNLVAVISNGTAILGLGDRGALASKPVMEGKGILFKRFADIDVFDIEINEKDPDKIIDIVHALEPTFGGINLEDIKAPECFKIEKTLIEKCNIPVFHDDQHGTAIICSAALINALEIANIDRKNAKIVFNGAGSAGISCAKMFVALGVPRENIIMCDSKGVITKDRIESVTEEKREFATDLKVKNLEEAMKGANVFAGLSVADCVTEDMVKSMAKNPIIFAMANPNPEIQYEKAIAIRDDLIMATGRSDYPNQINNVLGFPFIFRGALDVKAKAISEKMKMAASLALAALAKEKVPEEVFKAYGNKTFEFGKNYIVPKPFDPRVIEWVSPAVAKAACDEGLAREPITDFEKYKSSLKERMKKYWE >gi|343385375|ref|AEM20865.1| aldo/keto reductase, complement(244146..245132) [Brachyspira intermedia PWS/A] MQISENRYDNIIYNRCGKSGLKLPIVSLGLWHNFGENCDYNNMKEMIKTAFDNGITHFDLANNYGPPYGSAEISMGKILNDGLNKYRDELIISTKAGYDMWPGPYGDFGSKKYLIASINQSLKRLNLEYVDIFYHHRMDPETPLEETMEALTRIVKSGKALYVGLSNYDGHTMERASKLLYMANVPFIINQNRYSIFDRTIENNGLKLKAKKLGKGIIAFSPLAQGLLTDKYLNGIPKDSRIAADGRYLKHDAITRKKLSQIEQLNNLAKERGESLAQMALRWVLKDEEITSVLIGASKPSQILENLKIINKMPITDDELRKIDDISL >gi|343385376|ref|AEM20866.1| hypothetical protein, 245324..245851 [Brachyspira intermedia PWS/A] MNILVGCVTMQPKDNNNTATKDNAVTKDDTANNEDKKEETITREDTPKMKVTVYGADKEIQAVEINDKVYYVIGGKDVEDMTEAEIKKSSLVAPLKITEETINGTKGIVVTYYDVKVFLGKRTGTGTTVGIFEPQKNDWTTGNDIDRSLSIQIKLSRNIAGPIDIKRGSISLAFN >gi|343385377|ref|AEM20867.1| hypothetical protein, complement(245962..246402) [Brachyspira intermedia PWS/A] MLGFDMYKIYSAFIIIMLFIISCNDKKLESKQYRLNISETNEVINIKSRNFDGISLIKNSSFTAYPNITINELLSPFSSVEWQDFISEDDYNRYIDIVARYDTNEYIIQFQITDQYRWELYAFEINKTPYTIDIVANELYKLYTNK >gi|343385378|ref|AEM20868.1| hypothetical protein, 246602..247324 [Brachyspira intermedia PWS/A] MKKILLMILIVSVLAIGCKDNVTNPMEYMVERGSDWTSRANVRANEKIYFGPIYIVNNKHVYVTSAKIIQVDKTTSITNDIPSVTEKDERGYITSITPLESQSSGSIAYIVFTYKNTLVSASFLEEYLYKYSGEIYSNTWFEIYNENMQVAEIVIVKEITVTRKVYDDQGQYIDTVSGTFSGEKTFEVIESPSTPGKIYIMLNPSYLNFKNEDGQYYIAPYPNYINYKDIEIEIVYTIIH >gi|343385379|ref|AEM20869.1| hypothetical protein, 247713..248804 [Brachyspira intermedia PWS/A] MLGVSYGMGMMLTAGTFSRIKIQKKYYTNLIYVEAVLQLIIAVACLIFLPPEMSLFYSFLYGCCATIFFVCFQSSLDVVSKDLPVTLSGALFIFSWSLGFAVGPTVTGLIYKFDYKLGFYFVIVVSVIMFILFYLSRHLRFKANNKKIKWNIPFMRAPRYKVHIGWLVIFVGAMVLHTLRFMFLDYGIKVIGFSEADSSLLVGSLSAFMAVGSLSSAFCLRFLEKKRVFTIVGLLTPAALLLITFTRNFWLFLIAFMFLGFVSGFGYFFGLYYALADQDNAPRNVAVNEALTGVAALFIPFIMGYLASNFSYFVGFLFMMSVSLICYIIAIYTMWQKKRTALLKEKFNKMIDDIDSKYINKTI >gi|343385380|ref|AEM20870.1| D-aminopeptidase, 249133..249939 [Brachyspira intermedia PWS/A] MKVFISADIEGITTTTQWPDTDAGSLTYKEHTLQMTKEVNAACEGAIDAGAKEIFVKDAHDSAMNIDQTALPECVKIHRRWSGDPYSMIEGIDESFDAIMFIGYHNAASIGNNPLSHTMNTRNVYVKLNEVLASEFMFFSYAAAYRKVPTVFLSGDKGLCEVAQNMQPNHPNLVTLPVKEGIGYSTINYSPNLMVKMIKEKTKEALSQDFKGKLLKLPNTFKLEVCYKEHGYAHKVSFYPGAKKINDTTVIFENNDYYEILRALKFIL >gi|343385381|ref|AEM20871.1| nudix hydrolase, 250049..250555 [Brachyspira intermedia PWS/A] MKEIWDIYDINKNKTGRFHQRGIPLKKNDYHIVIHAWVVNSNDEVIITKRHKSKKVCPNMWECTEGSILAGEDSADGALRELQEEIGLSFKKDEAVFLTSFVLEFSNTIVDSYMFRRDVNIEDLVLQENEVSDAMIVNREKYLEMCKSGEIISSIRYFYDIYDKLNNK >gi|343385382|ref|AEM20872.1| metallophosphoesterase, 250582..252885 [Brachyspira intermedia PWS/A] MKVLILTVGPQGSGKSYTIKKANLDYYSVSSDNLRILYSGVFPDGYNGLEISEKDNAYIWNNLILSILENRFRLGQFTILDSTGLFNLNSITELAKKYGYRIVAVLFDHLSLKECIENVRKRGVGSNIPEEVIQDFFMRMKNFKLSGANIFKASDYGSAETALLEACKWDSFYLNETEFEKYDNIKVIPDLHGEYDVFKKFLEKENYFNDKKTAYIFVGDLIDRGVKSKELLDYFLNNDIGNNVYFIEGNHDVNLNFFANDIKVTSQEFYKTTYKEIKKAFTITKQVKDNSDNVVEEKILNESELNNYKKKIRNFYKKFRLYYFFTFKGKKFFINHSGIDKMYEHIPASLLNGVVTYGYGEDDNSYKSYIEVGNKFKNNHSDIIQIFGHRNVLQEELEDNLCKINDNAYCIENSVEYGEDLIILNLKYMSIESYKNDREIENLFDKEKTDSELVRHKYYDTVYSTNFSDRVFYKRLWNEQTIKARGLYRYNETNEIAGRSYDKFFNYDEVKETKLKALQNNIKFPVSVYKKYNGYLFLVFLDKTRDELIFATKSSIGTTMASWAESLLTEENKNFIKEYCKKNNTTFVFECIHLKDSAHPIVYNESFLILLDIIYNEESFRKLSYEELSSKDITEQFQVKERIEIFEAPKSNISKDEYNKYIEKIIHKYVDDFSIDYEGVVFEDANCFMVKVKCPFYIIKKALRSESMRLNRLSYSLNIHYPNNHVIFVGNKIFLKYKRENSLKEWRSLEVSEVVEAYNEVLKELGK >gi|343385383|ref|AEM20873.1| TPR domain-containing protein, complement(253218..254396) [Brachyspira intermedia PWS/A] MAEKDIKNFFNKAYDAFKSKNYKLAIEYFSEVIKLDSTIYEAYYNRANAKANINNEDSYKSAVEDYTWTIKLNDKFAAAYYNRGIINRSLGNSEEALKDFDKTIELNYNLEEAYYVRANTKASLKDYKGSIEDYNKAIEVYPHFADAYYNRALSKNALSEYKEAIKDYDKAIEYNSHFIDAYNNRGNVKEKLGNFNEAIDDYTNAIHINREFADGYFNRANAKFHIKDYKGAVEDFDELIKINPKYTKAYLNRGIIAMTMGAYQEAIKDFDKAIELDSNIADAYYNKAVALNHLGIYDEAILYYDQAIKLNPNYSESYFNRGISKSKTAYMKKEKINEDEYNKLVKESEDDFDKAYDLANEHIKHIISEGLKKLAFLNMEAADNFCKKHDIK >gi|343385384|ref|AEM20874.1| single-stranded-D-specific exonuclease RecJ, 254570..256729 [Brachyspira intermedia PWS/A] MDINNLNTTILELLKLRGITSKEDIYDFFFQDIYSLSNPFNIRDVNVFVDRVKEAIENDEKILVYGDKDADGITAASIIYNTLKVVTKNVEAFVPNHTTGYGLSKAVIEEYANSGVSLIITVDCGISNAEEVEFARDLSIDIIVTDHHDIPEILPNAYAVFNPKISNTGFVSKNFSGCAVAFKLMQAFVFSYTKLYNKDIIVLDYEIDKSKNVLKRIRALKSTNFVISDEVFGFELINDNNCYKSIYADYYDELMSEDEVLEELATYMFEGDGCVLVLTGGEERLKKLLNFYERYEIYLPEYDNVYDLLQLGAKYGNVNIKTTKTLDDFALALNVNIYRYDDIAYRDLIIKMEIFRRLFYISQKQLQSYIKKKSILVLFGSVADVVPLIEENRAYVKCALKELEKPSHIRYNIILERINLLNTKIDTQAISWRLAPFINAAGRMGSPETALKLLTCEIKEEAVTLSNEVYNMNETRKSLTESNFTIVNEYIKTNSCLKLPIIVVKSKKIEQGLTGLIAGKVLSEYGKTAVIMHESDDGVCIGSIRSRGEDNARDMLDYANAYLTKFGGHKNAAGFTLNTDNFDKFQSKIIKYASSQNFQTEKNEDEFDLELSFKDIDIKLAKLLEMFEPYGCGNEEPLFMSKKVKVNSINKMKKNNKTHLRLELLQDNKKVNAIMWDKSDDEADKLLSSDYIDIIYKLKVNRFNGSEDARIYVESYKIF >gi|343385385|ref|AEM20875.1| hypothetical protein, complement(256745..257173) [Brachyspira intermedia PWS/A] MSNTFSPKAGIRLELPKFNNTTNIKDIKKEVLSWIKFFKGEDMKTLLKEDTVFELVKEKSESFLCDNPLIDTYKRKEIDEYFNKIMLDYEIKNAMNKGIQEGIEKGIEQGKIEIERNLKKSGIDIKIISDNTGLSIEQIEKL >gi|343385386|ref|AEM20876.1| serpulina hyodysenteriae variable surface protein, complement(257351..258478) [Brachyspira intermedia PWS/A] MTAMALLTIASASAFGMYGRGDGWIDFLVHGNQLRARMDQLGFVLGNATIKGTFGFKAEGNYWGQILSGQTDNIYLLPSISGGIGYTSEMIGIGVGYSYTMAKDYLGGYIGVHTPVLMVNALNNNLRISIPIQVAVKEYSLGNVKETYTGVAFDNIQLRYYTGIDAFNAIRVYFYYRNSTFRYNNDASKYSTSEIFGFQTRFYFLNTTVGNVGINPFVRVDFHTVLKGGVNNGEYIYKAEDVGNGRFVSGTVKQSDYYAKNPYKVSAQVALGITANSDIVSLYVEPSLGYTGNYAGQANTISTDGTITKGPDPKVEHKLAWGAYTELYIRPVQDLEWYFEMDVNNSGTKQNSGIPVYFETTTGITWYLPALNGAQ >gi|343385387|ref|AEM20877.1| variable surface protein - VspF, complement(258928..260091) [Brachyspira intermedia PWS/A] MSINYIKILGEKTMKKVLLTAMALLTIASASAFGMYGDRDSWIDFLVHGNQFRARMDQLGFTLGNGTIKGTFGFRSQAATTYLGNILSGGTGAVDLTTTISAGIGYTSEPFGIGVGYSYTHLHDRLGVHTPVLMINALNNNLRIAVPIQIATSSNPFNNVLGLNTEKDYMGVSTDIQIRYYTGIDAFNAIRVYFRYGQAGYKNGTTDMFAQSIGFQTRFYFLNTTVGNVGINPYLKVEFDTALVGDNKTVRAGEAAYDSQNKVFNSGSFAINSGTGKQEWEKTPYKVTAAAVLGITANSDIVSLYVEPSLGYTAEAGGKQKGAINDPTVTHKLAWGAYTELYVRPVQDLEWYFEMDVNNNTGAANYNNVPVNFAASTGITWYLPALN >gi|343385388|ref|AEM20878.1| variable surface protein - VspF, complement(260676..261767) [Brachyspira intermedia PWS/A] MEKKMKKILLTAMALLAMAGASVFGMYGDQDDWIDFLTDGNQLRARMDQVGFVLGNNTIKGTFGLRSQAVGTLLGNIISGQTDNIGLDATISAGIGYTSEPFGIGVGYNFTYYNSTLGVHTPVLVMNALNNNLRIAVPVQVAVSKEPFGKGTGNNWKDYLGVSTDIQIRYYTGIDAFNAIRVYVKYGQSGYKEVQNNMDMFQQSVGFETRFYFLNTAIGNVTVNPFVKVAFNTALVGNNTMVRAGEAIYSIYAQKDIKWDKNPYDITVAAVLGITANSDIVSLYVEPSLGYQATYEGKYKTDTVDPKVIHNLAWGAYAELYITPVQDLEWYFEMDVNNSNSDGSNVPVSFAATTGITWYLPEF >gi|343385389|ref|AEM20879.1| variable surface protein - VspF, complement(262689..263822) [Brachyspira intermedia PWS/A] MKKVLLTAIALLTIASASAFGMYGRGDSWIDFLVHGNQFRARMDQIGFTLGNGTIKGTFGFRANAINLGNLGNILSGSTGNVKLDSTISAGIGYTSDMIGIGLGYNYTFANDSINGGYIGVHTPVLMVNALNNNLRISIPIQVAVKDYNNVLSYTGKTTYTGVAFNNIQLRYYTGIDAFNAIRLYFYYRNSSITREGSDYSQVSEAFGFQARFYFLNTQIGNVTVNPYLKVAYNTALQGGTIGDYTAETFVSPLTVNDGINKFKQSDVYEANAYNVTAAAVLGITANSDIITLYVEPSLGYTASYAGRPKGAVDPKVNHKLAWGAYTELYIRPVQDLEWYFEMDVNNGANTQSTGVPVYFETTTGITWYLPDLGGAQ >gi|343385390|ref|AEM20880.1| variable surface protein - VspE, complement(264222..265373) [Brachyspira intermedia PWS/A] MAILTIASGSVFGMYGADNTWLFFLIHGNQFRARMNQLGFTLGNGTIKGTFGFKANTLINGSILNTGGKGNKSPLEATISGGIGYTGDGFGIGVGYNYTYSATGTGINTHTPVVTMNFLNNNLRIALPISVAVENSIGGTVDANGNTVLSERKDYLGLSIPAQIRYYTGIDAFNYIRFELNYGLNRYNGTYGANTTSKFEAQSISFQLRLHFLNTVIGNNVTVNPFLRIDFGSTIGAKGKSVLASSALLPGGFDQRFTAWAASGWREATASEEAYDREAYDLKIIPSISLSVNTDIINLIFEPGLGYRVQDDGRKGSKLSHTLYWQAYGEIYIRPVQDLEWYFEMDVNNGVPKLQGNPIASGNNIPVVFGANTGITWYLPALQ >gi|343385391|ref|AEM20881.1| ATPase, AAA 5, complement(265717..266838) [Brachyspira intermedia PWS/A] MAMKKDNINNEEKIHQKPLMEELYKEELEALKNEDKNSKPKNWNLSPQAVRDFILGKKLKSGVEIKRKFYGDDALVERAIITLAGNRGLMLVGEPGTAKTMLSELLSAAISGNSTVTIQGTAGTNEDNIKYSWNYAMLFAKGPVEEALIPSPVYIGMNQGIITRFEEITRCPLEIQDSLISILSDKIMNIPEQNRVLFANAGFNIIATANTRDKGINEMSSALKRRFNFETVEPIKNPKLEGEIITNQCQTLLELSDIDIDIDYDVVDILATTFNELRSGKSFENAKIQELNSVMSTAEAVSVYYQSALHSYYYGDKNIKMDTVVGNLIGSVAKENKDDLPKLKNYFNNSVKIKAEKLGKRWKEYYESRNLIK >gi|343385392|ref|AEM20882.1| putative RarD, Predicted permease, complement(266874..267743) [Brachyspira intermedia PWS/A] MAIFLLIGVMALSASAIFVKLANAPSSIIAFYRIFISFCFISVITISKKSSREELLSISRKEIILSIISGLSLALHYFLWFQSLSLTSVASSTVIVTLQPLFAFVAGHFFFKEQYSKLAILGFVIAVMGSVIIGWGDFQISSKALLGDFIAFISAGLISTYFIIGQYTRKRLSALTWISLTYFSAFIFLGILSYIMKIPFIGYSLNTWINILGITFISTMLGQVIFTWLLKYFSATIISMTILGEAVGTCILGYFILHESISFKQFIGIAVILIGIGLFLWEKRKTISQ >gi|343385393|ref|AEM20883.1| hypothetical protein, 268306..269028 [Brachyspira intermedia PWS/A] MALISNIVFGYNQTFKVGEYIKYDVLAQVPEFNISGKVGILEAKVLAISNVNGVPAYHLYAHVYTTGAANWVYKVSDIFEAWVTTNDFKPIILKKDTSEGDWTNKESLTFYNNYYLFNDKRTVDEKVEFEGMAFDALSLVFFMRFVDKNIGTFKVNWLEGKNVKKDIRFTIENGEDLKTKLERDKLSTIRIYEKDKYGTDALIAKDKYNQVPLDVIIAEQKVYGLTIRVRGIIREYKDGK >gi|343385394|ref|AEM20884.1| conserved hypothetical protein, complement(269093..269302) [Brachyspira intermedia PWS/A] MINKSMSIGEIIQIFPDSVEIMMGRGLHCVGCHVASWESLEEGCRGHGMSDEVIDSIVKEINDKLEASK >gi|343385395|ref|AEM20885.1| TPR domain-containing protein, complement(269360..271498) [Brachyspira intermedia PWS/A] MSSLDEISKYIDDGDYKKAIEELDLIISREPDNARAFYMRGKSAFIELQNEEFDKNKYDARRALIYATIEYDLNKSIDIDPNIIDAYRGLMYLNRDLKNVDKEREYAQILFEKDNTAYDALLILASSYLNNGENEADFHQAIGYYDDFIKNVKPENSKVARFERGLCYYNLNILTKADIEANKLIYDFPFYDDAYFLKGIILAKNGTKSEFYDDAIFFLDRAVELNASNYNAIYERAEWYFNKENYRKAIENYNELLKHNNKYRLNALLGKIQALHDLIIENENEHYPDSQEEGKDLAEVFYLLDKVIDVIGIKSLQYRYYRGNLYAYQGEIKKAITEFKKILNENKEAWIYEKIAELYHNYAKNDDDYKEALKYLSHIDKIEYKYSTYYLSIFSNYEIKNYEAAAQLCREFFEYVNDNDDEVYYIRFIYAHSLQMIGSNDYKLILDNFKACLNSNLDKAPIYRSIAKIMLFNMPNEYINEGIYMLKKALELNDAISYHIYAKELFYGDIITPYPELAISMANIAFDIDNTLECALTVIGKAYELGRGIEQDEFKAFETYSKAMTICQNSNSKCSCSNGLIAHCYYKGIGVEKNEEMAYDIIKTTVDALGNNSHDYVALLYSYFALNNIEGFDLVTSLTLFENIENYSHNIYIIMILKRIYKRLKKHNDVRRMAKMEKKALENTGELNLNYIRKYIKNFNDFYPILNKDFTL >gi|343385396|ref|AEM20886.1| Protein of unknown function YGGT family, complement(271508..271789) [Brachyspira intermedia PWS/A] MQTLRLYSFIWFVWIILSWLQAFGAMHLDYYNPIVNFFYQITDGIIDKIFGGRRLIVGVLDLSPLVFLLVLQLVVPIILRVIFQFLLNIVARI >gi|343385397|ref|AEM20887.1| SpoIIAA, Anti-anti-sigma regulatory factor, complement(271843..272175) [Brachyspira intermedia PWS/A] MVRTIIEDKTAIINIEKNIISENVDILEEKLNYVKNAGVLNLIFDFHNIEYMCSSALGLIASALRLSGENGGVVYFCSLSKQLKSLFEATKFLTIVNTADNIDEALKNIK >gi|343385398|ref|AEM20888.1| exodeoxyribonuclease, complement(272264..273049) [Brachyspira intermedia PWS/A] MSILKIISWNVNGIRAAYKKGLVDFIKKENPDIICLQETKAFEEQLPEDLRNIEGYELFINPADPEVKKGYSGVAIYTKLKPNKEIKNKLGSKFSDREGRILSLEFDDFTIFNVYFPNGGKSEEHFQYKLSFYDEITKHLSKLKKNTNVILCGDMNIAHEAIDLARPKENEKSIGFLPEEREKITEFLNKGFTDTFRMFVKEGGHYSWWDMKTRSREKNVGWRIDYFFVNNEITPNIKRADILTDVMGSDHCPILIEWDKQ >gi|343385399|ref|AEM20889.1| ElaC, Metal-dependent hydrolases of the beta-lactamase superfamily, 273217..274101 [Brachyspira intermedia PWS/A] MKVRFLGSRGSIPTPGNSFSEYGGNTSCIQVIDDDGTYIILDAGSGLKNASYYALKSEKTESIILLTHFHWDHIIGIPFFAPFFSDKYSFTIYGPKDSSTEMYDTINNILAKDYFPVNLEQFAANLKFEAFYEGKKITFGNMIIESMWVNHPCHTLSYKITSGNKTVIYLTDHEPYKKRLHAQHPSLSHYNHNADLLHARLIDFVRGANVLIIEGEYTKSEYYNGHVGWGHSTLNDAIQVGLDADVPYVILHHHNQERTDAQIDLIHNKLMAFLKKEEIDLQLAFAKEGSYINI >gi|343385400|ref|AEM20890.1| putative methyl-accepting chemotaxis protein B, complement(274589..276430) [Brachyspira intermedia PWS/A] MKRRHSIRFKMPLTISIITTIFLIITIIVLSYRAFVGVSKTTFSGFSSTIEGYKSMMDSWLFENKTLIKTYAITPAVINYLLNSYSTNANIQLNETLNKFESINKFSLDIGVTDTNGYILDNAKHVEIGKNIHELRSGIWDNFKQNNYDVAYGSKILKSSADNKWSLALISGVRDANNNLIGTIYMIINWEEFVNSLKKLKLDETGRLFVLDNDGIIVADTYDYINENGKAYFNLIKKDNKPNGIITYKLNNNTSRTAVYSKMEQLPWTLTMAMDNKIIYRENIRMIRIAIIVCILSIICINTFLISYIKKTMSPLDSIMKQAQNISEGYINVKEIKKERKDEFGKLEKTFNIMSEKLSEVINEVNEASKEILTSSQNMMESSSELSSRTESQASSLEETAASIEEIVSTIQSSTENAVNGKDMMNESINYIGEAAEIITETSTNIEEVYKSSEKIKDITKIIEDIAFQTNILALNASVEAARAGDQGKGFAVVASEVRNLAQTTQASVKDITNLVDNTAEQIDNATQTARKSQELFEELQNKVRETSNLMERISNTALEQQSGVNQISTAINSMESATTQNAALAVDSNNLSKNLFGRVEKLQQSISFFKLS >gi|343385401|ref|AEM20891.1| methionyl-tRNA synthetase, 276780..278735 [Brachyspira intermedia PWS/A] MTDKKFYITTPIYYPSDYLHIGHCYCTIATDTMARYKKIMGYDVYFLTGTDEHGEKIARKAEAAGTTPKAYVDNIVNATKELWKRLHIDYSHYIRTTDDYHERRVQKIFKILYDKGYIYKGSYKGLYCVSDEAFFTESQVVKKDDGKFYCPDCEKELEYKEEECYYLKLSEYGQWLIDYYKEHPEFLEPKERQNEMLKNFLLPGLEDLAVSRKGLQWGIPCPVDSEHSIYVWIDALANYITALGYPEEGQDELYKKYWPADVHFVGKEIVRFHAIIWPIMLKMLDIPLPKKVYGHGWVLFDDGKKMSKSRGNVVDPNTLIDKYGVDALRYFLMREINFGSDGYYSQELFLKRINSDLANDYGNLWHRITTMLGKYFNNILPDEVESVYGDREKELKKMVLTLDANVESALDSFKFHEALSYIWEVIRMTNKYVEESAPWNLAKDETKKDHLANVMYISFQVYYIVTAYLQIFFIETPKKVFNRLGLGDSVPLDTAKQWGSLKAGIKIEKGEPLFNRYDIEKEIGASSEENKKQVNPPKEDKHKPNIEKEDFDKLELLTAKILVAEKVENADKLLKFVLDIGGGEQRVVVSSIAEYYKPEEMVGKTVLYLANLKPKKFRGVTSHGMLLLADNGETLSLMTTEKGFDAGCAVN >gi|343385402|ref|AEM20892.1| cell division protein, 278873..279535 [Brachyspira intermedia PWS/A] MAVIILGVIVVINKARILRVEIRGLEVLNAIDIMEEAGLSKYNNISMFNIPKKEIKSDIENNPRLQVESIKTSFPDLLIINVIERGTLFLLESSSGIYEITDDGYIIKDNIIHNYDVPYITGLTINPTNKMIENDYSKYLSSVIYDLKTNHNEIYNLISEINAYGDDLILYPRGYQVQVILEKYVKTEKFVDLAAILKTLQNQENQTHRIDFRFKEAIVN >gi|343385403|ref|AEM20893.1| MATE efflux family protein, complement(280368..281648) [Brachyspira intermedia PWS/A] MYLIKFSFILFISNILQYLYSIIDIIFISHLVGDNGVIALGNCASIMFIITSVSLGLSIGGSVIISKYKGADDNIKYKQSIGNLLFLSSSLALIISIIGLIFSRHILLFMNIPKESFKYADDYIKIIFSGTFFIFLYSSLSSVIKSSGREKTSLYFIIIAALLNFLLNFLFCYILKLSVKGAALATVISQAVSFLLSLYYTRKLLTFNFNIKIIKELIFISLPCIFQMLIINISYFFVNIMMNKYNVLAGFTIGLKINTFIGMISWSIGEALSIIVSKSTGEKDYIKIKSTVKFAIFLNIAATVTAVIFIHLFVKNIISIFYSGDEKVINDIILYLQVCASFNCLTYALMYVLDSFLIGIQKSYLAFVNSFIDSIIFKVIISKILEIYMCYLGIYIAMALSSIVPALIGLIYFYMFIRKINYNKLH >gi|343385404|ref|AEM20894.1| 3-oxoacyl-(acyl carrier protein) synthase, complement(281929..282897) [Brachyspira intermedia PWS/A] MERAYIKNIAYYVPERILDNKYFESILDTNNEWIITRTGIETRHMARADETIFEMGLNAVRNLEKKGVDLKEVDTILVPTVTKDYIFPSMAGQLQKALGLKHCFALDLSAACSGYIYALNTATSLIESGQCKNVLIVSSEKLTKDINWKDRGTAILFGDAATASLITARNDGKGIIGMHMQSEPDMSIVLNGGSACPIRADDLEAPEFKIHMDGSETFKRAVTEFSNSIDKVLETSGKQLSDVKYFVPHQANLRIMQAVAKRIGLPMEKVSVVLNKFGNCSSTSIGLALTDALDNNKINDGDLVLLTGFGGGFTWGSTLMIW >gi|343385405|ref|AEM20895.1| hypothetical protein, complement(283548..285068) [Brachyspira intermedia PWS/A] MDYNEKLYNVFSSGEQRLESWMAAVFTKEYDHNMTIEEFRDILSQSDEYMVLEFNEIEESKFIRDKSKWEAYIKLQYLPMVMDEDEHSCGCGHDEGGCCQDDDEHSCGCGHNHDDEEHSCGCGHSHDDEEHSCGCGHNHDEEENNDELTFYVALVDASSVTENVPEIFSVNTVREDDYKEACQCKYAVHVSTIFDNHPLTDYQRQLKLLDSLVPECSIFLDMSCYTAHSGDWLSYTSTFALPPSLDYLYTIHAVYDDDKDSNKVEYWFHTHGLYRVGSIELEIVGVEDSNAAYGALLNTCAKMFIERGVPEAGFKFNPAYNTYVCWFPWQEALKKLNIADDVTGSAKDRNDGVHNTPSGILLAVDADGNYHSLDYYKNELTDNPMFMMSYFETSLMREAAFEKLEYFLELLNKNKGDDKTSFLVKLGYGETEENPNDLEHLWFDVHDFTNDGYFDATLINEPYKDLGMHEGDRGMHSIERLTDWEIYTEENNYNSRNIYLLFQEEE >gi|343385406|ref|AEM20896.1| Predicted metal-dependent hydrolase, complement(285162..285872) [Brachyspira intermedia PWS/A] MYYKMNDVIIEYKKIKNIYIRVKPDLNIYVTAPKRVTKKYIYELIEKRKDWIEERKEAIKKKNSFDLSKKELASGNEVYYLGKSYMLKVLKCQKENIILAGRTMYMYVNIKDKEKYKNSDIRKKHILLDTWYKKEALKLFDSLIRKYTSMMNLEINTFTVKKLKSKWGSCDTIKKHLTFNLELMKYPISSIEYIVLHELAHLLQANHSKKFYNIVSLYMPEWKKEKKILDTFFTNL >gi|343385407|ref|AEM20897.1| methyl-accepting chemotaxis protein McpA, 286220..288064 [Brachyspira intermedia PWS/A] MKRIHSLSFKVPAIISVISILIIFIILSIAVMFANKGISKSRFEGFANTAQSYAKLFDAILIDQVSLAKTYSVAPAIMNSLLNRNEQTEAVALNALALFNGANEYSINIAVIDLNGDIIADALGNSIGNNIADTRPNFWNILESKNFEYTFDEEIIDSVDTGNKSLILGGAIKSLDGNLLGAILVVIDWKLIHDNYFSDIALGETGRILAIDSNLIDIMDNIYEQIGSNVVQDYKTVFDNNLNQGTLSYIYMDKKRTGSYCRMKSMNWIIAMTMFDSEIYATNRELILISSLVGLIAILLLSIFVALFIKRIMGHINSIIREAKEIETGNLTYVSNEHKRKDELGILFESFSGMRKKLTEIISQVNDSSIKITTAAQELANGNSDLSRRTEAQAASLEETASSMEEMASTIKSSTSHSIEGNNMMKESMSSIKDAGAIILETTKSIEEVNEDSEKIKNITKVIEDIAFQTNILALNAAVEAARAGDQGKGFAVVASEVRNLAQNSQSSAKDITTLINVIYDKISKSVEKAKESEKIFEDLEKKIEETSNIMRDISETAIEQQAGVDQVNTAVSQMDSVTQQNAGLVEQSASAAASLLNEARELEEAMRFFKLDK >gi|343385408|ref|AEM20898.1| hypothetical protein, complement(288971..290158) [Brachyspira intermedia PWS/A] MNKYIIIFSIILSSILSANSFKVISRQGEASVIVNEEHANMDIKKSFPDDYFSISTKEESYLVIDNGEKSIILMPSSKLTYENNKFTLDNGYIYIKSKHNDDIQMTLTKDGKGYNFKGKSFAVVSYDDEVSVITYNNAVKITPEASLGVSYFLEPNHKTSIIPMLNGPYRTTENEKSLIENVSRQLESEVASHLNEDIDRYNFKIMEGTKNENTIYRVVHPEKGPNIFLIVPHGSERVGTDVAMERITMPIKKGSLTIVPVAVPEAYRKNTRAIEGQDINNRFFDKSISRTDTDKLAKEYMDMLDEYDIDVVLTLHEGNGFKEFFGDSIIYDTRKLDDKVVKVLDNINSRIEPMKFKFRQMYYPMPTTITYYAAKKNIESFGIELTRNLDYDKKE >gi|343385409|ref|AEM20899.1| hypothetical protein, complement(290275..290688) [Brachyspira intermedia PWS/A] MIDKAPGPREGIDKGYWGKRSRTDNGLKRTVDIEGDFVTYYENDVQKVKIPSKFFELSKGDGFYGYSVMLGLLYPGVSINVYNAKNASILPSVYFEYIDYNYYLDIQLRDDGVPISAKYNKKETIYSLENMLYAKEN >gi|343385410|ref|AEM20900.1| hypothetical protein, 290954..291109 [Brachyspira intermedia PWS/A] MLSALKNFQVVLYLASNPLTVYSLSTGIGEVELLAFLPQLIINRNSENVKM >gi|343385411|ref|AEM20901.1| hypothetical protein, complement(291360..291740) [Brachyspira intermedia PWS/A] MTNSLNLFIKITPSQLPENIRRFIASNYSKAKIVYIDKVKDQYEIKLSNGTYINFDKNGAWNYISSDDKLSENILPKTIASKIKNIMKKYNNAYVFEISKRIEFYRIRLTNSLEICIKNNGQLIIA >gi|343385412|ref|AEM20902.1| hypothetical protein, complement(292315..292707) [Brachyspira intermedia PWS/A] MKNFQAKSLLTVAILSIVTCGIYFIYWIYVTTNDVNNYMEQEYINPTLAVVLSIITCGLFSVYWFYKYGTIVFNDMSKKAELDSYGESAAVLAILLFIPFGYIYSIIALQSKLNIIFTKYSDNDSESNIQ >gi|343385413|ref|AEM20903.1| putative penicillin binding protein, 292901..295276 [Brachyspira intermedia PWS/A] MFKKKIKDNSNNNVVKKKKSKLKKFILTIFIVCLFISVTVGIIGIYFVGGVYKDWVARRDQSMAMLEEYYDIIVIRGNEKRIRYFNPLNPFGDSPPTKIYDRNNILIGEYMPPAYEVVNVDDINPLLEQTLLLMEDQKFYSHKGINYFRTAYLGIRTILTRKIIGGGSTLTQQLAKLLFTKSERTIERKLFEMFAAREIEQKYTKKEILAMYFNTVYLGDGNYGFEAAANHYFNKPLRQCRLLEYAILVGMLPNPTYYSIVNNPDNSRKKVEQILSRLVKNKIIDKETMEAELALFDKEYTNINKQVKGAQWKMTVNRTPYVNEYVRQELLNYFNKDELALSGLKIYTTVNERYYRIADSVMKENIRKLQASSSNRSYQGAMVSIDPKTGGVLVMIGGDGYTLQNQFNRAVQAKRQIGSVIKPFIYLYAFEGGAQPFSTMLDTNYSYPQGTGKPAYSPRNFDRRYRGEITLETALSKSINTIAVKLLNDIGLSYFIEHSREFFGENAYIPNALSIGLGTMEMSPLDLASAYSALANGGIKYEPYIVDKIIDMDGNELSVTALVDRTPHKISATSPSSYYFLNTTLQKVIAPGGTAYRSANTYGFKYPSYSAKTGTTSEHRDNWFAAYNDEIVTITWIGSDRNDLLPNNVTGGATTALATFQYLDAITPSSKREFNWPVPNDVLIVEICQDSGLPRNHTCVNVAPLTVGGNVDLSTQCPIDHIRTGTPRNDATNDAMMEDEGDFYYTPLDENSNSYDSNQNNNTQNNNQNNNNIYLLPEDNIEDPSLGNIRS >gi|343385414|ref|AEM20904.1| MATE efflux family protein, 295693..297459 [Brachyspira intermedia PWS/A] MLSIPTLIMSIVQSMIPLMDGLFLNNVAGTVIASSVHFAEPIINMMTALSQGLGVAAMAIVGQYNGLGDFKNAKRISTQIVVIGVMFGIAMGPTLYVVSILVSMNLLPNIKENVFTYLSLYSFVMPMTFLAALYNGIKNANGKPEATLIRSIILLLLKVLFNFIYVYLLHLGVVGSVLASFSTYSIVTVWMYYDLFIKKGDDKLSLKEFKFDSAVLKELMIIGVPSMLNTFLTNLGFFLINTEVEKYGAAVLNGQGISNNIVNICFNFTAAFGSAVTTMVSMNIGAKYNDKARKSCYTGIIMSVITAVVLIAIIIPLTPHLTILFTREAEDLYVANRSLPIFAFGVLGFGVAMVSQGALIGLGRTRIPLIISILRIWLLRFIFILLTSKYLSYWSVFWGNLFSNTMAGVIALAIILRVPWVSVINLKTQNSLVLRTRLFVDSLGARLFPKNIGKRKDYVQKMRDKLSKIKDPVKLVLFRERELEKIERMQEKEERERLREEKRKLERAEWKMQLEEMKELREKKNQERREYNENRKKEKEAKKLQMKQEVQSRREARHRLREEKKIESQKRREERRNLRNKNNDAKNN >gi|343385415|ref|AEM20905.1| putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, 297474..298184 [Brachyspira intermedia PWS/A] MNNTTLVILIAGSSRRFAGKVKKQFIKVDNKPIFIHTLINMLKFNFNNVVLVSSEEEIKNIKKYIEKEELIKEKIKKNIHYIKGGSERVYSVYNAMTFLNEHRDDIKTDYVFIHDGVRPLVKKKEITLLYETVLKYDAAILASKVVDTIKKVNDDKTITDTIDRTYLYRAATPQGFKFDNYMKAIEMYINDKDAGLVTDDAEIYSKYLGDVKIAECSSDNIKITNREDLDIFIKLR >gi|343385416|ref|AEM20906.1| Uvrb/UvrC protein, 298358..298807 [Brachyspira intermedia PWS/A] MNGNIIEKCLELEFNNIDTIFPNYKSLPSKKKKKKTPNSSKICKVCGYSLDDFLKTGVVSCPKCYEYFKSELSKHIKKIHRENKHIGKISSKNLTNKDIEAKINKYREEIELLIKIEKYEEAALIRDKLEHLKKDLISKKTKSEKKDVR >gi|343385417|ref|AEM20907.1| guanido phosphotransferase protein, 298797..299858 [Brachyspira intermedia PWS/A] MSVNNTANWIYKKGEDDNIVLYSKISIYRNIDDIRFFHNMDKEDFKNTENILKSNIEELNLNLSYKKLINIPALNIRMLIENLTIPSNKNIVHASLFTDEDEDISLLINSNEHLEIQTIARGLELENCFNKAYEIESALDQKIDFAYDKKFGFLTSSPNIIGTAMRAEVCVAVPCLAWKTPDNIDYIISECNKKGLEVNVKNGLLNISNNIMIGVTEKFILDTIIEKVKEISEKEKKIRNRIKKLDRVKAEDRIYRSHAVLLSARSLKYRELINYSLWLRLGIYYDIIENINLDTIYYMAFVGKNAHLKHLYEKSNYYRNIDEIRANVIRDILKNSYFIKLISTLYLKLKFIP >gi|343385418|ref|AEM20908.1| hypothetical protein, complement(300292..300744) [Brachyspira intermedia PWS/A] MLFVLSSCETLQSSAREITRAYIEEHKPDIRVKSAKISSITLKDITLTTLFEIKNNLDFEVPIDKVQIELINTSGKTFSTATSVETLKIPANQARDINLDFQAKYLDVFTTAFDAIKSKSFKCDAKITLTFTIYGMKFDFPYTKELTFKE >gi|343385419|ref|AEM20909.1| hypothetical protein, complement(300891..301304) [Brachyspira intermedia PWS/A] MKLLVDVKIKNILLQKFEWDSTYFQITLNIKNNYPIKIKLEDLKFNLINCLNEKFAYGECDNISIKSKESKDITFNIILYNKEFSNLINNFFNFKKSIFKIHIITAKLNMFSIIPINLKNYEHNVDILNIIKHLYNS >gi|343385420|ref|AEM20910.1| ferredoxin--DP(+) reductase subunit alpha ue, complement(301377..302204) [Brachyspira intermedia PWS/A] MGYKIVAREQWSEKVFMMKVLAPDIAKHRKAGNFIIFRLDEKGERVPLTIADADAEAGTITIVTQSIGYSTTKLMGLKVGDEILDIIGPLGQPTHIEKKDGIVLGVGGGVGIAPLHPIVEAHHKAGNKVISILGARDKSLIIMEDMMKKISDEVLICTDNGSYGEKGLVTDMITRIYERGEKISEVIAIGPAIMMKFVAMLTKKYNLPTVVSLNPIMIDGTGMCGCCRVKVGDQTKFACVEGPEFDGHLIDFDLLMKRQAMYKKEEHECNLKLAN >gi|343385421|ref|AEM20911.1| 50S ribosomal protein L19, complement(302241..302675) [Brachyspira intermedia PWS/A] MDQQIRLVEAKYKKEAILPFEIGDTVKVWVKIIEGDRERLQAYEGTVISIRGKGINKSFIVRKISYGVGVERIFLLNSPRIDHVDIIRKAKVRRAKLYYLRNKVGKKARLVERLGVKIPKHSDLIKNTTEENTAVEENNTSSAE >gi|343385422|ref|AEM20912.1| putative transcriptional regulator, complement(302832..303869) [Brachyspira intermedia PWS/A] MNDNVIELKNLKRVTQKEIAKRLGISRTTVARAINGSEFIKEETKSKILELASELNYEKNYIGSSLANQKEKTVHCLIANSFNEFYTKEIVRGLNTIQKEYSIYNYNLKITPTEIHSPDKQIETLKNILEKGNIDGLIITPLNREVIHNILKPYFGKINIISIGTRLSENIPHVGPNHIKQGSIVAGIVSNLLRDNEKLLIIDNGDDNISSGMYLEGFLQRIKYTKIDIIGPIYCGNIEDSIHTIKKICSKDNIKGIYINRYAQEIYDMIDKSILKDKKIVTHGMAESIKNLIKSGIISFTVMEGVFMEGYNAGKMMFEMIYKKNVSTNWEVSDSKIIFLENLQN >gi|343385423|ref|AEM20913.1| LemA family protein, complement(303954..304562) [Brachyspira intermedia PWS/A] MRGSAVAVIFIIVNIIAISIFMIVSTTSIKESILSEEKLSRESLDSILDTYYKKNIASENYYNAVSVIPKIDIYVLHSLSNYIERIKSIEADSTLIEKPLTFQEYQYIQARITENINKINYTARNYPVLRTNQNYIAALNEMRPIIEDEKKYISTYNDHVLEYNRLTTTPPSSIVAGIMGKFPFLKFETGTNIIAQTSHMFQ >gi|343385424|ref|AEM20914.1| extracellular solute-binding protein, family 3, 304744..305487 [Brachyspira intermedia PWS/A] MFKNNIIKIVVALSIVLVLFISCQKKEEKNKLYVGTNAEFEPFEYREGDKIVGFDMDLIAEAANLIGKEIEIVDMQFDGLLPALEAKKIDIIAAGMTATEERKKFVNFTDPYYNSKQSIVVQAANTDITSFDNFTGKKVGVVLGYTGDILVSEMPNVEVQKFNNTAETILALKSQKVDAVVLDYEPAKNYVAQNTELKLVETDAAVEEYSIAMRKEDTELLAQMNDALKTLKENGTYDALISKYFGK >gi|343385425|ref|AEM20915.1| amino acid transport system permease protein, 305573..306286 [Brachyspira intermedia PWS/A] MLEYLELLKLIFISNERYIYIIKGLLFSVGTTACSTIIGVILGILVALLQLSEFYPFKNSAKLKDFNPLSKLAFWYVNILRGTPVVVQLMIWANVIFVDSLRDTPILIIAAIAFGINSGAYVAEIIRAGIQSLDKGQMEAARALGMNYSMSMKEIIIPQAIKKILPPLVSEFIALLKETSVVGFIGGVDLLRSANIITSQTYRGVEPLIAVGIIYFILTSVFAMIMKRVEEGLRESD >gi|343385426|ref|AEM20916.1| amino acid ABC transporter, ATP-binding protein, 306318..307007 [Brachyspira intermedia PWS/A] MEVLKGIDVDIAKGEIIAVIGPSGSGKSTFLRCLNRLEEPSQGDIIIKGKNIMDKDTDINVIRQELGMVFQHFNLFPHKTVMENITLAPMKVKKISKENAEKKAIELLNKVGLVDKKDVYPSKLSGGQKQRIAIARALAMEPDIMLFDEPTSALDPEMIKEVLDVMIELAREGMTMIIVTHEMGFAKNVATRILFMNDGKILEDEKPNEFFSNPKHDRVREFLYKVLNH >gi|343385427|ref|AEM20917.1| putative peptidase, 307230..307967 [Brachyspira intermedia PWS/A] MVYEIFSNKLSIGIISYVVFIISASTHEYSHARTAFMFGDRTAMRLGRLTLNPLAHIDILGSVVLPIIAAVTGIPVIGWMKAVPVNPNNFNNFERDQALVSFAGPFANLMIATVSFIIMKILTFTVDGTFIIYKIMMFLEHSNNGLSNFMLNALPIVLTMLFMFYMINIMLMFFNLLPFPPLDGGWILRFFLSPKGKDTYDKIYPYGFLILYALLFFGILRTILAFIQTISQHLLGKSINIIFSI >gi|343385428|ref|AEM20918.1| hypothetical protein, complement(307977..308870) [Brachyspira intermedia PWS/A] MKNRLSIIYFIFFILFCFSQISFARRNDFDFDVTPLIEKNKMFSVGIGGIFSEYNSWFQSGKLQILDPNNQDISRRDLYFTFMPYFKVRPIKYLELGVSTSFTYQRQDWRNDITSATNMTDEFNFDSINATMKATLLDWYLSIGVKVGLSYSFMKNTHIYSEIKDPFNIYTTIMLAGIPKVIPLNFFFCYTFDTRDNLLKDILNTGEISGGIEIITSPFITLYTGVNYIFPYTKQSSLSYLDIFVKFKATISDFLYMTVSYQKTVYGTGNAPNTSTFNFGIEYMFYTPKGSWWSLNR >gi|343385429|ref|AEM20919.1| hypothetical protein, complement(308894..309958) [Brachyspira intermedia PWS/A] MIKRIFFSIFCIVLFSTFLYSQDTNWVIRIRDGEGNIKKLITVEECLSEISNLTVLRGAPENAVNALLTNDFQLWQFASQIIEQEVIYLKAVEEGYDKDEEVLKLIAKERDNQLSQIYMQSKVSDSFAVVTDAEKRKFFNDNISRIRAAVGPNVRYEQVAMEIETTILQERMRNEYDKIIETGKTKYNVKYSMDTDPCVTIEEETVPLSEFNNMFDESIKQAGANIPAALKLQAKEGMFKAFVAREIMMYEAKKEGFYETPQAKSIENFLTRSAVTSHYIDKTIRSTIPTPTEDEINLAYERYGKMYNIDSLPYADAQKALASLVIEAKTQQKYQILVTDLRYRYNIEKILIYY >gi|343385430|ref|AEM20920.1| hypothetical protein, complement(309984..310391) [Brachyspira intermedia PWS/A] MQDITFQINVIAISLAFIAISILILVLAIFFVLLAGYFRFTNRFDRILENIESISEKIGSIADTVNDEANKVKVTLDSIHDSFNSLTNSINNFSSITTDISNNFSIINIFKSIFALFTGKNRKRDDFTENDDEDF >gi|343385431|ref|AEM20921.1| hypothetical protein, complement(310400..310666) [Brachyspira intermedia PWS/A] MSKEVSGMFSFLLGLSAGLALGVLFAPKAGEETREDIKETMDNIKYKVDDIYHRSVLKTSELVEKGKERTNDFFEKRKKKTSEETVEE >gi|343385432|ref|AEM20922.1| thioesterase, 310884..311396 [Brachyspira intermedia PWS/A] MELKVLNKQNNSRMCLVCGFKNDLSLKAEFYELEDKSLCALVTFKDVHQGYPSRVHGGILAAILDETIGRAMMPYTGEDKWGVTMTLTTKYKRPVPINKEIRIIGKITSGDGRIFEGEGYILLNDDKVAVTAKGTYICMSLEKIAEMDPNNEEDWAVEKKDTDPTTINIP >gi|343385433|ref|AEM20923.1| ATP binding protein, 311463..312122 [Brachyspira intermedia PWS/A] MNKKFVMSYSGGKDSTLALYKMIKDGYIPKYIMTTINEEDEHSWFHGISKKLFYEVSKCLDIPHIAINTTHYTYRVNFIEELKKVKEEGINICAFGDIDIQMHRDWAENLCKESGFESKFPLWHQSRISLAREFVDAGFKSKIKIIDTSKLDKKYLGLDFTNELIEEFISIGIDPAGESGEFHTFVYDGPIFKKSLDIKLSEVHDFENHSSIDIICNNN >gi|343385434|ref|AEM20924.1| glycosyltransferase, 312237..313997 [Brachyspira intermedia PWS/A] MKINELVSILVPVYNIEKTIEKNINILIEKVSPFFMNFEIIISDDGSSDNSKEEIKKICTNFQNNNTNKNLKNIIGVYARENQGKGHALKRACEMSSGEYIIFCDGDMEIDPSQLENFFVIMQKENADVVIGSKRHKDSIVNYSNIRKLISFIYFMFVKVFFHLPIQDTQTGLKLFKRDAIINIFPRILVKAFAYDLEVLVACNSNGKKIVSAPVIVNPNRHFGFIRFPILWRTFIDTLAIFYRLNIIHFYKDLFCELKEKPLVSIIIPLKKINDYIKEETEYLLEQIYTNFEVIILPDKYIEDEVNIELFKDSRIRIIETGELPPAIKRAIGVKKSNGNILAFLDDDTYPEKDWLLNALRAMESTKISALGGPAINTPKDNFSKQISGLIYSSTLMSGKHKARYIPDKVQYVNDYPSCNFIITRELYDRVGGFDSEYWPGEDTILCNNIMKENEKILYTPEALVYHHRRDLFFGHFKQLKGYAWHRGYFVKRFGGNSLSLSYFIPSIFLIYTIFVPFALYFDLPQVLNTYIPAINKNIFLALLLFPHSFYALCLLGSWVSTLSPIKGFCKAIGIFLSHLTYGVFL >gi|343385435|ref|AEM20925.1| hypothetical protein, complement(314033..314305) [Brachyspira intermedia PWS/A] MANYEELNNLMENIDHQILFDNALKINELLKDDILLDDMMSENLFVYYFELLEMIKSNPESYQISDIDNDEKIKAINSIIRKMELSFIEF >gi|343385436|ref|AEM20926.1| inner membrane translocator, complement(314706..315659) [Brachyspira intermedia PWS/A] MDTIYFLVQQTMFFSIPLLLVALGGMFSERSGVVNIALEGIMIIGAFAGIFFISRLGANFPPMITLFLAMIISALSGLIFSLLHAYAAISMSADQVISGTALNIFAPAFAIYVTRAIQTVQQISFVNNFRIESVPILGSIPIIGGLFFKNTYITTYIGFIILALSWFVLYKTRFGLRLRSCGEHPQAADSVGINVYKMRYIGVAISGALGGLGGLVFVIPTSTNFNATVAGYGFLALAVLIFGQWKPMKILYAAFFFGLMKTLASAYSGIPILANLPISNNIYKMIPYITTIIVLAFTSKNSQAPKASGIPYDKSVR >gi|343385437|ref|AEM20927.1| inner-membrane-translocator, complement(315691..316806) [Brachyspira intermedia PWS/A] MDFKNKLAGILEKEGFVNIFSSFLAIIIGLLLGLIILLISNVHDAFPAFMTILSGGFSGGSRGMGQVIYTATPLILTGLSVGFAFKNGLFNIGAPGQFIVGAYAAVLVAVKCTFLPPALHWFVALIVSFIAGGLWAYLPGFLKAHFNVNEVISSIMMNYIGMYLVNYLVTLTVYDMLKNQSQNIPPSSMIPTMGLNVIFRGSSANGGFFIAVIVVIIVYIILSKTTFGFELKACGLNKDASKYAGINEKRNIVLSMVIAGALAGLGGGLLYLSGVGKHIEVVDILAEEGFMGIPIALLGLSHPIGILIAGLFIAHITVGGFYMQIYDFTPEIIEMIISSIIYFSAFALLFKSIVGFISKKLIKKEEKNANE >gi|343385438|ref|AEM20928.1| hypothetical protein, complement(317373..318074) [Brachyspira intermedia PWS/A] MRSNKDFNVLNDYFVRYLFSDKGSESILLDFINSIMLDSGMKTFRSVEILTPFNYKENYGDKETIADVQNGSVVIIEIQLQGNSRFPERILYYWASNYSKLLKQGEKYDALTPVISINLLNFNLDESNNIHSCYMIYDTVNQRLLTDHLQIHIIELKKFQYNLLKPDLNCWLKFFTMKEKDNKEKIMSELVKEKPIMEEVQRKYNNFIKDRLMMNEYDKRQAYLYGNQIMLEE >gi|343385439|ref|AEM20929.1| ABC transporter related protein, complement(318111..319655) [Brachyspira intermedia PWS/A] MIGNIMENSEYVVEMLNITKRFKGIVANDNITIQLKRGEIHALLGENGAGKSTLMSVLFGLYKQEEGVIKVNGKEVNIDNPNTANALGIGMVHQHFKLVHNFTALENIMLGVETVKNGILQVDDARKKVMELSKTYGLEIYPDSLISDLTVGMQQRVEILKMLYKDNNILIFDEPTAVLTPSEIEELMKIMKSLTKEGKSILFITHKLNEIKEVADRCSVLRKGKYIGTIDVKSTTKEEMSEMMVGRKVSLVVEKTEAKPKDIILSVKDLNVKSSHSEKNIVKNVSFDVRAGEIVCIAGIDGNGQSELIYALTGLIEMSSGSIHLNGKDITNLSIRNKTLSGIGHIPEDRHKHGLVLDYTLGENTILQTYFTERFQNKGFLKFKEIENYANELIKRFDIRSAEGAKTIARSMSGGNQQKAIIAREIDRNPDLLIAVQPTRGLDVGAIEYIHKELIRQRDNGKAVLLVSLELDEVMNLSDRILVIYEGEIVANVNNKDLTINELGLYMAGSKRSA >gi|343385440|ref|AEM20930.1| basic membrane lipoprotein, complement(319796..320842) [Brachyspira intermedia PWS/A] MSFILVVSCGGGGKKSGGYELALITDVGTIDDRSFNQGSWEGLTKYAQEKGISHKYYQPAQKTTDAYVDAIDLAVSAGAKLVVTPGFLFEPAVYRAQDTHPNVSFVLLDGTPQDGTYTDFRIEKNVYSVLYAEEQAGFLAGYAIVKEGYTNLGVMAGMAVPAVIRFGYGFVQGANYAAKELNMPTGSIKINYTYIGNFNATPENQTLATSWYQSGVQVIFAPAGGAGNSVMSAAEQNNGLVIGVDIDQSAESPTVITSAMKMLGESVYNAIDDFYNNKFPGGKSVILDAKVNGIGLPMATSKFQKFTQNDYDTIYQKLNNGSVKVLTDKDAKDVNQLPLDIVKVNLIQ >gi|343385441|ref|AEM20931.1| basic membrane lipoprotein, complement(320943..322019) [Brachyspira intermedia PWS/A] MKKIFSFIIITTAFILMISCSKTTTKEGEFDIALITEGEIDDKSYNQGAWEGLVRYAENSGKSYKYYQATEKTTEAYIDAIDSAVNEGVKLIITPNFLFETAVYKSQDKYPDVNFIIIDGVPQDGTYTDFKLEDNVHAVLYAEEQAGFLAGYSIVKEGYTNLGVIGGMPVPPVIRFGYGFVQGANYAAKELNMPIRSIKINYTYIGNFYDTLQNEELASSWYQNGVQVIFAPAGGAVKSVISAAEQNNGLVIGVDVDQSFESPTIITSAIKRIRNSVYNTVDSFYNGTFKGGEIAVLDATVNGIGLPIKTSQFKNFTENDYNAIYKELSDGNIQVLKDRSVKTVEELPVDIVEINYIK >gi|343385442|ref|AEM20932.1| basic membrane lipoprotein, complement(322033..323079) [Brachyspira intermedia PWS/A] MIVFLYAVSCNDIDGEEASGYEIAVIVRNIDDKSFNQSTWEGVKDYAEHYGISYKYYRVPDKNVQETLNAIDIAVRMGAKLIITPGHIFETAIYKAQDMYTNTHFILIDGEPQDGSYNDYKTAKNTIAILYAEEEAGFLAGYSIVKEGYTNLGVLGGMALPPVIRFGYGFVQGAEFAADELKMPKGSINIKYTYVGNYDNSPANQALAASWYKSGTQVIFAPAGGAAYSVINAAENNEGLVVGIDVDQSFESPTVITSSMKLIRESVYNAVAAYYNGNFNGGKTFILDARVKGIGLPMNTSKFKVFKEYDYNIIYNSLVKKKIKVLKDTDAESVEKLPLNFVKIDYIN >gi|343385443|ref|AEM20933.1| basic membrane lipoprotein, complement(323150..324184) [Brachyspira intermedia PWS/A] MLSCGQQADKDTNTSEIAVLIDLGPIDDKSFNQGSWEGVKDYAENYGITYKYYRVPDKDIDSYLNTIDLAVRCGAKLIVTPGYMFEPAIYKAQDMYTNVHFILIDGEPQDGTYTDYKTSSNTVAILYSEEEAGFLAGYSIVKEGYTNLGFMGGVAHPAVVRFGYGFVQGADYAAVELKLPKDSVNIKYTYVGNYDPTPENQTLATSWYRNGVQVIFAAAGAAGNSVMSAAENNNGLVIGVDVDQSFESPTVITSAIKLIRESVYNAVASYYNGNFSGGKTTVLGAQVKGIGLPMNTSKFKVFTQDDYNIIYDSLVTKNIKVLKDTDAESVEKLPLNLVKIDYIK >gi|343385444|ref|AEM20934.1| uridine phosphorylase, complement(324279..325064) [Brachyspira intermedia PWS/A] MFPKAYYQENENLVHHLKLKKGDVGRYVIMPGDPKRCVKIAKRFDNAKLIADYREYATYTGYINGVKVSTTSHGIGGPSTAIALEELIKVGADTFIRVGTCGGMNIDVLPGDVVIVNGAIKGGGTMDNYIPKEFPCVPNIDVLEAMIEGADKIKTRTHVGVVQCKDAFYAQHAPESMAVDKELLYKWDSYIKAGCLASEMESATLFAVGAAKNVRTGAAMLVLHNQERIKNNINDPKDYTGEEAIDLIIESIKILIEKDKK >gi|343385445|ref|AEM20935.1| uridine phosphorylase, complement(325083..325901) [Brachyspira intermedia PWS/A] MEYNEPKAFYDEEAFKNNLLQYHIKLKKGDVARYVLLPGDPKRVGYIAKFLDNPELKADYREYVTVTGKYKGVDVSVTSTGIGGPSASIAMEELIKVGADTFIRVGTAGGLSLKVKPNDLAIAQAAIKDEGTTKEYIPLEYPAIANTDVMLALRDAAKKINANYHIGVVHSKDCFYGELEPQNSFFREKFENNLKYYTLCGAIASEMECAALFACASLRKVRAGGIMHIVENTMIERMGTHLEYSDNIENMILTALEAIILLNEKDKKAEKK >gi|343385446|ref|AEM20936.1| Deoxyribose-phosphate aldolase, complement(325956..326606) [Brachyspira intermedia PWS/A] MNNLNKLIDHTILRPDATIDDIRKLCIEAKEYGFYSVCVNSAYVNVAYNFLLHSDVKVCSVVGFPLGAMMKEAKAYETKVAVDSGADEIDMVVNVGFLKSKKIDLFERDIKKVRDACHASVLKVIIETCLLTDEEKVLACKIAKECGADFVKTSTGFSTGGATEHDVKLMREAVGKEMGVKASGGIKTYEDALKMIEAGANRLGTSSGIAIVKSSM >gi|343385447|ref|AEM20937.1| aminotransferase, complement(326799..327917) [Brachyspira intermedia PWS/A] MKYMNLYRGYEKRKEAIDKKISSIIERSQFVFGAELDELEKELSNYTGAKYAVGVSSGHVGLVLSLLALGFNAGEDHSQKEVIVPAMTFFSTAEAPAFLGMKVRVCDIDEYFNMDVKKLESLINKNTAAIIPVNLFGQCANYDVILDIAKKNNIFVIEDACQSFGASYKNIKSCSGKLGDIAVTSFFPAKPLGCFGDGGMVFTNNEELYKNLKQLRHHGDEGGMIHVKLGTTGRLDNLQAGILLEKFKGFDADMDHRRSAAEYYNEKLKDVVKVPQVAEYTQSVHAQYVIQVEDNRDEVRAKLNELGVPTALYYPHPIHLAPVLVKKLGYKEGDMPVSEYASKHNIALPIDNDILREEQDMVIEAVKKVVNK >gi|343385448|ref|AEM20938.1| putative anti-sigma factor, 328079..328510 [Brachyspira intermedia PWS/A] MSIEYCGNKVEKRLSLKIPSDRLLVPKVSNDFLDFLHSNGVKECDAFQIAFEEALTNAIIHGNNNDYNKNVSMYFYIDDEMIKVIIEDEGDGFDYFSAMICLTESQDNIYKDSGRGIFLISLYTDDFYFENNGRRIVIIKNRS >gi|343385449|ref|AEM20939.1| histidine kinase, complement(328932..330482) [Brachyspira intermedia PWS/A] MSNDKKMKKVKNTKYFRKSPPIQLDTGFVSLERFIAINEYDDGSFSKEYNCDIINRKGRDAVIIVPYTYIDNQIHVLMISNFRPVVYYREKVMTGKNSEEIDEHIMNFLEFPAGMLEEDEINEKNPNQGIKKCAKRELEEETGYDVDLKKINVLGHRYYSSSGIITERINIATCDITGLTPKKEIQTDGSVMEETIESFFVPFEKAMRWCKEGVIKNAGTEIGLHRLYFSILYEHQKNHNLILQKRLHALLNEINSLKKSAEHYNKLIREFKATVSHELRHPFTEIMGYINLLKKNNMPEEKREEFFNIVSRSIKKLYDTNNNLIQIALKDDESSKYVSEFNIEEELNIIIEGYKFIYPKNINIEMNIEKNCTTLIGYHERFRLIMEGIISNAFKFTKSGTISINVRTLDTIEKKELDFSPDLFNYHTMKNIIPNEIEIIVKDTGKGIKPSKLKKVFIPFYQADSRFEREYGGMGIGLSVVKDLLDTMQGTINIDSSEGAGTIVKLRMPFGIPSKN >gi|343385450|ref|AEM20940.1| response regulator, complement(330609..331088) [Brachyspira intermedia PWS/A] MKKYLLENKLEDITPLIETLSADVKKYIPNNEMDLFAAALYEVIMNAIEHGNLNILYETKKNWLKKNIYHKKLKELLKTEKAKTTHVEITLQIEEDSIIIAVKDQGLGFKPKQEAKKINSDGFARESGRGIMMIKSYFDEVKFNKKGNVITLTKIIKKE >gi|343385451|ref|AEM20941.1| ribosomal protein L34, 331325..331441 [Brachyspira intermedia PWS/A] MRRARKFGFFKRMATKHGRDVLKRRRRKGRYRLTAADE >gi|343385452|ref|AEM20942.1| ribonuclease P protein component, 331670..331849 [Brachyspira intermedia PWS/A] MGRNRVKRIVREIYRTQKDKIPTGYDYFIIVNRFDSYKLPSFDDYKKDLLKLFQKVLHI >gi|343385453|ref|AEM20943.1| putative inner membrane protein, 332144..334015 [Brachyspira intermedia PWS/A] MSNNKRMVIAIGLSAIIMFLYMFYQAKTMKPVYNSNNVNTNSNSVSNNNTTSENTLLNTAQMQKIEKIENTNAAINNEKILENEYVIATFKNGSLYSYKLKNYYPQDLGPDATNEIIDMVEQVYEGIYPFTVTFQNLSNSIAIPENLDYQLTEESGDKVTYSANAIIDGTEVKIIKTFTFGEDPYQLKNSVSIENIGEKDLSLFYSYFLATGIGPYRTDKNAVREDATKAQYLIKGNGKSKILLTGDIVKDNLFSRLFGFGNSSKGIKTNQMRYAVYEGEDKWVALNNRYFAIISSPAQSNNTVFETMTFSKPSTNEYRNDFHVANLMSKHTIKSGSSITDNYSVFMGPKVRRTFSKYYLEESYESIFQESFLGLNLRPLTYILDVILNALYNITKNYAWAILLFTFLFKLVTFPLNHASYKSMKKMQLVNPKIERIREQYKDYPDKLNAEIMAIYKKEKINPLGGCLPMLLPFPLLIAFFYLMQSMVELRNTPFLWITDLSSPDKLFVFPAGIPILGGFNFNLFPIVMALTSYLSMKLQPSSSAGNSSAATQMKMMTTIFPLMMLLMFYNFASGLALYWTAQNIFGVAQQFITSKLDKSNTNEIVEEEEIKQTGKKKKRKKR >gi|343385454|ref|AEM20944.1| jag protein, 334078..334782 [Brachyspira intermedia PWS/A] MLVKEFSGKSEKEAVSKALEELNLTEDQVRIEVIDRGKQKILGFGEESPTIIRVYYEEISTNLGEFQSIVSNILKYMGVEAEVTAKEESEKRIYINISTEDSGVLIGKKGATLEALQFIISLIASKKFNDDTERHIILDVDGYRERREETLKHIARQAAQQAKKTRRVVALDPMSPYERRIIHLELQNDNDVETKSDGEPPYRSVKVYSKRKGGYNNKRYNDRGGYNKSYYRNR >gi|343385455|ref|AEM20945.1| UDP-glucose 4-epimerase, complement(335241..336233) [Brachyspira intermedia PWS/A] MAVLVCGGAGYIGSHVVNELLKQNIETVIIDSLEYGHKDAIKDCKNFYHGNIGDSDLLDKIFKSHNIDSVMHLCAYIEVGESVQNPAKYYHNNVSNSINLLNAMLRANVKNFIFSSTAAVYGEPEKIPLEEDCRKEPTNPYGDSKLALEKILSWYTKAYDFNYVALRYFNASGAHPDGHIGEDHKPESHLIPLILQVPLGKRDSIKIFGDDYPTPDGTCLRDYIHVCDLALAHIAAMNYLKKGGKSVACNLGNGNGFSVKEVIEVARKVTGHPIPAEVCPRRAGDSSELIASSKRAKEVLGWTPTIDSLETIVQTAWNWHKNHPNGYNDR >gi|343385456|ref|AEM20946.1| 1-phosphofructokinase, 336477..337364 [Brachyspira intermedia PWS/A] MDMNKLEEGELNKVNTSYTLAGGKGINVSKVLKNFGIESVALGFCGGFTGEYIKSDLNKYGIKDNFISLAENTRINVKIKTEKKETEIMGKSPKILQENIDQMLSIIDNNIQDNDILVLSGSVPSSVKEDIYKDIIQKTKLKNNVKVILDSRENAFKIAVKENVFLTKPNRKELSEYFGRDIKTVYDIITYARQLVEDGSDNVLVSLGKDGSALVTKEGSYIGNAPEGKLVSSVGAGDAMVAGIVYGISQNLSILDSYKYAIASGTATAFSEGLTTFEDMNNLLDKVEVKSINLK >gi|343385457|ref|AEM20947.1| hypothetical protein, 337545..338261 [Brachyspira intermedia PWS/A] MKMIKQIIIAMVFISSSILYSQYYAIGEWHLVEKIDPITDEKEISIFIKKQEENSLNFNTLMIKVNSNSININLYTPSLLFKQRFNDNDKIYIVYRLGKNEPRNTSLNKYGETEFYSLTNSQIASQQSIILLKELLHHNTLAVRALETIGSAKYTYTYVYELQKLKEILLYADFEGTILENYQAEFESILENQIAEEKDKVSQEEENSNDQGTSETPKTNHKDNIYLIDDINYKNPII >gi|343385458|ref|AEM20948.1| crossover junction endodeoxyribonuclease, complement(338254..338736) [Brachyspira intermedia PWS/A] MITLGIDPGFARCGYAFVEAKNSVYKIVDSGLIETFQNQEYNQRLSFIYTQLDELIKKYKPSNAAIEELFFSKNTKTAIKVAEARGVIILALTLNNIEFYEYKPKEVKSQITGNGNANKDAMMKMVNLFTGADIIQDDTADAVAIALAHASRNRIFNNIK >gi|343385459|ref|AEM20949.1| conserved hypothetical protein, complement(338779..339522) [Brachyspira intermedia PWS/A] MSGHSKWASIKHKKAANDSKKGKIWSKIAKEITIAVKEGGSPDPDQNARLRMVIVKAKGTNMPNDNIDRAIKRGAGAGEGANIEEMSYEGYAPGGVAIIVDVATDNKNRTAAEIRSIFSKNGGNLAENGAVSWQFKKKAVVMIPAAGNTEESLMDIVLDAGAEDIEQDEEVFTITGPMETLSSIVDALKAKGIEPESAEIVRVADNTMTIAENDAKKVMKIIGLFEDHDDVSAVATNLEITDNLIEE >gi|343385460|ref|AEM20950.1| glyoxylase family protein, 340168..340620 [Brachyspira intermedia PWS/A] MLKEVMHIGITVSNIERSINFYRDILGLTLIGEALMEGKETDALFAMSNCKVKIAYLNGSDNIIAPPIELLQFVSPETIKDEPKLNKISASEICFRVENIEKVYKYLIDNNVECLSSPQEFDFTSYGFSKSKALYFKDPDGIILELMETF >gi|343385461|ref|AEM20951.1| conserved hypothetical protein, 340867..342054 [Brachyspira intermedia PWS/A] MSVVLNNEEVNPKILQEALDITIKRFPTLSLMIKKGLFWNYFEENHRRLIVEEDKYYPCYNINSKLNNGYLLRVGYYQYRIFTEVYHSLADATALISFLKSLLYHYFVLLGKNIDDKNDDIFKDTVPIIADYDDSFSVHTKDKIETKKEKKIKNVYLIKGKPLKFYGDNVVHGMISLKSIKEESKKHNTTITSYILSALVYSIYETRIKNRLDGKNIVMCVPVNLRSIFPSISLKNFFGVANILIGTDKELTFDDIIMITNREMKEKISKEKLQNFIYENTKLENNIFAKFIPLVIKNFVVNLAFELFEDKLKTMTVSNFGNISLPDDMKDYISHFEAVVYPTINSPLNCGLCSFGDKLSITFNRTVIETDIIKYFFRYISNITEVEIYSNDYGV >gi|343385462|ref|AEM20952.1| hypothetical protein, 342060..342728 [Brachyspira intermedia PWS/A] MAYCNNCRLKIKTNRNICPLCLKELNNNDNEIINEEYHSYEWFYKMQKKINAQKIVLLSSLAAIIALIIVNISTNSKYNWAVISVISILCSYFTYVCFTADTLYLRQKLLIEFFILMPLVIVIDIFTGFYKWSFNYVIPFLSLGLNIAMFLIAVIDRKYFNEYVSYIMSASFISIIMIILPLFHFVLWSSLSALGGGIIIILAMLILFRIDFVSSIIKIFHI >gi|343385463|ref|AEM20953.1| esterase, 342833..343729 [Brachyspira intermedia PWS/A] MERKQKKIEEKIRRKNLLGEYLTYPSMAVNFIKADKKIKPEKYTFDKNKAQYILYFAPQLKENESPKKQVIVYLYGGGWREGNANLYRFVGRRFAKEKFHTILLGYRLSKKYKYPAQIEDVFAGFNKALEVLKNKNIDYSDIIVIGSSAGAHLGALLVYYKEMHKKYNVDSNIFKGYVSLGGPTDLNVCTNDIITPMLDQLFEEGYNREEANPYNHIDGSERTKVLCVHSELDPICDVDNSINFSNKVNSFHDGLADCIIFDNKNIYHNNLVNGIFFEAMDSEHILDKVFKWIEKIDN >gi|343385464|ref|AEM20954.1| homoserine o-acetyltransferase, complement(343812..344915) [Brachyspira intermedia PWS/A] MKNIIKNKKEKENNEQGKTEVKYFNYDKPFKFENGASINELTIAYTVNGHLNVNKDNAILVCHAFTGDADVITWWDNFVGKKKAIDTDKYFVICSNVLGGCSGTTGPSSKKPNSNSYYGTDFPTFTIKDIVKVQKILIDSLGINKLYCVAGGSMGGMQVLQWTATYPQMMEKAIVIASSMSHSPMQIALNEIARQAITEDTEWYGGKYYGMSSPDRGLALARMLGHITYMSEEYMRKKFGRKRKTAVKYFTPSFEVENYLHYNGEKFTARFDANSFLYLTKAMDFFDVKDEIKKIKHKKNINLKKTLIISFISDWLYPSTQSAEIVAAYQHSNIDTTFHEIASNYGHDAFLLKNTEQTRYIKNFLNN >gi|343385465|ref|AEM20955.1| O-acetylhomoserine/O-acetylserine sulfhydrylase, complement(344963..346258) [Brachyspira intermedia PWS/A] MSRELKFETLAAHAGQDYNDTFGSRGVPVYKTTSYLFRDSKHAADLFDLKELGYIYTRLGDPTADVLEKRITAMEGGKASIAVSSGTNAIFYTIITICEAGDEIVSAFNVYGGTYSQFGAILPKFGINTKFVDAKDPENFAKAITDKTKLIFIETISNPSLDFTDIEAVAKIAHNAGIPLVVDGTFTTPYLLQTIKHGADIVINSLTKWIGGHGSAVGGIITDSGNFNWQSDKFPLFSKPDANYHGLRWAYDLPDELKNIAFTLRVRTVPLRNLGACLSPDNSWIFIQGTESLAVRMDRHCSNALKVAEFLEKDDRVEWVRYPGLKNDPSYATASKYLKDKFGGMVVFGIKGGYEAAVKFIDNIKLFSHLVNVGDVKSLVAHPASTTHSQLSEEELKKGGISKNFIRLSIGIEHIDDILYYLDEALTIANK >gi|343385466|ref|AEM20956.1| hypothetical protein, complement(347145..348920) [Brachyspira intermedia PWS/A] MIDGQQRFTTLYLTLLYLSVKENNKYKAYLKNFSYKVRNLTKEFIDLMIEKIEKEEDFFDIENKTWCLSVYKKDPTIKNIINFFKIFNIDEENQEYKDISLKDIEKAEFWYFNTSNTSQGEELYITMNSRGEKIAEYEDIRVSLLSEIKEDYKDKATKFNKIEHFFWKHRDNNKNNADEEFNKFLKQAIALSKFEIEGNTSNSIGNVDSINIIENKNYLKLDDIIYHHYSLELLYELLKLENTDNTKYLTKFINKDKTINNANILNISTIIIPFLYIVKNIFKIDEDNFKNKENFNNIEENTKKDLFQWLRFLYNIRFNHNSTSITNILMEIENNNKNTYTNIFDFFECKDKKELLSYYENYNGERDKFDLLESEVNKIKFLSIYNDDISKRNELQELFWKLENHDILKGNIDYIIKYSLENINNNLEAIKVEDIKEHFFDNFSKYKNIFETCFNEIPRDILIRALLTFAEKFDKEKSPYFKSHAVYYGWDNHNKLHKFSLCEKEEDLYKSFQNKENRYKTNPYYAQLFKILFDEIKKNSNNEIKDILEKIIKDFKDEQKKNPFYLIIRDDLKSYIIKYNTNIDNNITLQR >gi|343385467|ref|AEM20957.1| hypothetical protein, complement(349144..351234) [Brachyspira intermedia PWS/A] MTEEIKNNDDIIESVKEIFSNGRIYNIPEYQRGYKWSEEDVNALLNDINNFQAEGDKFYCLQNITIKKQKDSENIYEVIDGQQRLTTLSILLSYLGKTDLLKQDNNNNNKYKIKYSIRKESQEFLYKLLKETNNDYLNDNLSYNDKFDKAVKDLKKENKDYDRQDVFHFCLAKHTIINFFYKFDEDKKKSFTTKLLNNVKLIVNDVSSGNDVKGETIFKNLNSNKVALEYYDLIRAIFITRVAKKGNDIDLAEKRIKIDIDIDNMNIWWSDENVKEKSHTTTLLNNAQLILNYLDNGNNTKAETIFISKEKEANDIDLAEKRIKIGIDIDNMNIWWSDENVKEYFKMFSNENNISMLYDLYWKCRNNESNNNNEKSDAYKSQSNNEALFKYLDSNTDKAEVVFKEVVRFHNTMADWYEDKEIYHLLGFIGKQNIEDIKIIWDIWERANTTRESFKKALKQIIKNNLIKNIENENYLETIGDPNKNWYYQENNTIKLLVLMDIIKILNNKDIKYKLPVNYFNRNEEDIEHIFSKTPNDETTIKEAKENIDLIISSLEEYKREKITEDNDLKKFMEDNDLKKFEDKLPKLNNENNKQTLKDLELLDEYRRVIREVPYVHSIGNLVLLNSNTNRGYGNSSYIEKRRIIIELYESGNKYIRNHTWTVFSKNINEWTIDNIKNTAEDIRKEIEKFFDDNNK >gi|343385468|ref|AEM20958.1| thermonuclease family protein, complement(351743..352675) [Brachyspira intermedia PWS/A] MRTSNQKNEKIIKTCIYTIIIIFAFIFIIKTSNLKESKDLIIDSKSIISMLENNKTSIIHDYIKNRDKVYVLYAENDDDKKYIETHFPSIKFIGRFKLIFYTLFFKDKIMFYASDDKLIDKLRFFKIHYSHVVLDINDINSDEYLTLKDSYNTKLFLSFTNKDFYNIDSNYNKELSKYLADLDKDHIRVVDGDTIKYKDNYYRFIGLDAPELKQNYGTNVKAYVENKIKNASNVSMLVGSYDAFGRILCHLFIDDIPLAYPMMKDKQAKETIMKYGDNGFVNIASNIVYLSKFQGRRPFTDPAKFRSENR >gi|343385469|ref|AEM20959.1| thiamine-phosphate pyrophosphorylase, complement(352639..353340) [Brachyspira intermedia PWS/A] MKGIQDIINTKYINKRREILKEKYFKDSIYCVTAEDFSNGRNNIEVVKSMLEAGIKIIQYREKDNPNKYMREKYEECLKIRELTKEHDALFIIDDYADLAIAVEADGVHIGQKDMPIEVVRKIVGFDKIVGLSTTNEKQAEEAIHTSADYIGIGPIFSTNTKPDANEATGIDYLDYVVKNLDVPFVCIGGIKLSNIDLLIEHKAMSLCMLTEIVSSEDIKSKCELLIKKMKRL >gi|343385470|ref|AEM20960.1| hypothetical protein, 354075..355649 [Brachyspira intermedia PWS/A] MYKTIKEKIKEAKEILSNESENKEALKTLYTSYMQIKDYKKSKIYLDKYLEIEKNNYNAWKILGNYLDMYGNFKEAEKAYLKALEINDKDIRVFANLARTYIELDDKDNAYKTIQKAIELKSSDEKITIEISNILCLINKYDEAINLLENFYQNCYSKSLTEQLAYIYETVHSYDNAVELYKLLYDEKSLLNIYLYSTNQFKEAAKICRKNIYRDYYDYGYKLADIYLFLGYSKKAIKILKLAKDNDKHFYMLAYMERLAKIYESIKKYSKAAYMREQMANIDKKEEINWAYLSKYRFLSNDYDRAIEAAKEALKIDKDYRVPLYYLAASYKKQGKDKKAYKIYNKLISNFENRAEILKNFYYKNMYKYCETEEEKEDFHNTDWKHEGLDEEELLYTLLSYKDLGEYQKIKEVFNDYIYREKDNNKKDIYFFESKNIKKYMNEFHYNDGYITSIEIGEIFEELEMYEEALFIYFDVLNKYSYDKKIGIYHRLYSCYKKLNKHDLAKEILNIAKDIGINTNNFDE >gi|343385471|ref|AEM20961.1| hypothetical protein, 355691..355939 [Brachyspira intermedia PWS/A] MLDNKKNYTIEEIKELINKKINNEELEDDDVLYYKEAQEILNKHLKNNPNNKELLFLLALVQYDESYFNKKYKKLRITLKNF >gi|343385472|ref|AEM20962.1| hypothetical protein, 356386..357930 [Brachyspira intermedia PWS/A] MDSYEKALDIDVRSELDDYFYDCLNALKSLYDLYKKLGKNDDAIYALKDSIEKDISAPFMIIPFDDNDFKGSETYNDIVQAYTDIIDGSWHYCQSNACREELADLYIRYGEYDKAIELYNQISIENYKNIAETYIKAKNYKKAIDTYKIIIKMYPDNELNYYIDIARTYEEAENYNEAIDYYNKAIEIDSGNSDYYVNIAEIYKKLENYEEAVNYYNKAIEILNKPCKYHEELAECYERLEKYNNAIEAYKEYFKIADDELFIYIRGSKLDTLKNIAYLYDKLNDIENRNLYYEKAIKKCRELIKEYKRNKKEYLKEIADIYIKIGNKEKAFEIYNDLIKNYNKKISRNKNNYGLFEKQANLYLKIDDKESVLETYNKAIEVCLKKIKSFENKKISISDNDDKNKISSYMEDLSYLAFFYQKVSKPENCINIYEKLIKIYEENITDDEESTFYLESIAELYIKLNQKDNALKTYKRILEIDKDNNEAKEKIEDIESGKEVETACIFGLSYNRYK >gi|343385473|ref|AEM20963.1| hypothetical protein, 358038..360287 [Brachyspira intermedia PWS/A] MQDNKKNYTIEEIKELINKRINNEKLEDDDVLYYKEAQEILKKHLKNDPNNKELLFLLALVQYDNSYIDDEYKKVIATLKKLLNLNYKKDKVLYYLAASYYYDSDYDNNKKIQKEIIELLENAIELNNKDSEYWYLLGTAHFFVIKDYDKTIEFHKKAAEINYTETICNNKEYYYYRLGQINLYLGKSQEAIENFKKAIEDSIDCFNDFYKASDYWHYLGLSYEKNGQYDEALKSYEMALDIDVRSELDDYFYDCLKALKSLYDLYKKLGKNDDALYALKDSIEKDISAPFMIITFGDKDFKGSETYNDIVQAYTDIIDGSWHYCQSNACREELADLYIRYGEYDKAIELYNQISIENYKNIAETYIEAKNYKKAIDTYKMIIKMYPDDALNYYIDIARTYENAENYNEAIDYYNKAIEIDSENSCYYVNIAEIYKKLENYEEAVNYYNKAIEIFNEPCEYHEKLAECYESLEKYNNSIEAYKEYLKIDYKLFLYDIYTIGSSKLDTLKKIASLYDKLNDIENRNLYYEKAIKKCRKLIKKDKRNKKRYLKEIAYIYIKIGNKEKAFEIYNDLIKNYNKKISRNKNNCGLFEIQADLYLKIDDKEMALETYNKAIEVCLKNIKSFENKKISISDNDDKNKISSYMEDLSYLAFFYQKVSKPENCINIYEKLIKIYEENITDDEDNIFYLKSIAELYIKLNQKDNALKTYKRILEIDKDNNEAKEKIEDIESGKEVETACIFGLSYNRYK >gi|343385474|ref|AEM20964.1| prolipoprotein diacylglyceryl transferase, complement(360800..361711) [Brachyspira intermedia PWS/A] MFPPNIPILGAIRWYGLMYIVGILVSCIILYFVQKRGWIKFNLNEKNGGIYDMVFYAAVGAIVGARIGYFLFYSPKSFLTPWEIIGINLDNGFTFTGFAGMSFHGGFIGMFIALFIFSKKYKYDFYNITDNGTLPASLCLFFGRIGNFMNAELYGRVTDSFLGMKFPLYDAVGGYDRWASMFPAIRPYTELRHPSQLYEAFLEGIVLALVSFLIGYLSEKNKNIRPGTRLWVWIFLYGLFRTLIEQFARDITEWTVGPITAGAIYSMPMMLIGIVMLVYIYTRKDYNPALEANTKEAKKNKKK >gi|343385475|ref|AEM20965.1| hypothetical protein, complement(362032..362757) [Brachyspira intermedia PWS/A] MKHDLKSDLDKLENRGMALDDDINMLKNYSLEKLIDCLNNDNAIIRTSASINLMPYIYEDNVQNELLMQLSKEKSLYTKIAICETLQHGNIDTAEKMTEYLGIIGNNQYKKLPKKISSKKSYPLPRDIIARTLSKMDISILPVLIRILKSNNLIKIYEAIDAFGYICFYNKTLQNEKNLECIIKLMNKYKDDKLLLWKCITCLSAFNLDKSKEIINSFINEDNKYILSLEAKRSLSILNKK >gi|343385476|ref|AEM20966.1| cupin 2, conserved barrel domain protein, 362937..363266 [Brachyspira intermedia PWS/A] MYQDFNKTNLQNLGNGLKRRILAYSDNLMTVYMEFDEGAVAETHSHNEHEQITYIIDGEFEFTVNGEEYLCKSGDSLHFAKNMSHGCKCVKKGKLLDTFTPKREDFLNN >gi|343385477|ref|AEM20967.1| modification methylase, HemK family, 363274..364146 [Brachyspira intermedia PWS/A] MNISQAIINYTKQLEKINDDYKVSYIEAQTIIMHTLNLSKVKLISEGLRELTESDINKIESFINRRLNYEPLSYIINKKEFYGFDFYVDNNVLIPRPETEELIDLLLCYAKDKDNISICDIGSGSGNIPITLKKLFLDWNKNIDITAIEISNGAFQVIKKNALNILGDEKIINIINADALSFTPENKFDIIVSNAPYVPLRDKDFLQKDLDFEPQNALYSGYDGLDFYKSFLSIIEKYLKDNGAFFFEIGYDQGEALINICNSLDIKNVSVKKDLSGKDRFLICENIKNC >gi|343385478|ref|AEM20968.1| hypothetical protein, 364171..364581 [Brachyspira intermedia PWS/A] MQYVKFGSRRGEHGDIKLLDIFYKHNIVFAEVKAGSEKVKEKKFLKGTRIMIADGLTAVAIAEALTDSDSLDKFNIKFNKNEIDRVNVSDWVIAAKVKIYKLKEEDYFPTTIGKFYHIKNKDKIKLIDELLEKYSN >gi|343385479|ref|AEM20969.1| putative hydrolase (HAD superfamily), complement(364741..365505) [Brachyspira intermedia PWS/A] MKLFFSDYDMTIYIHEKIDESVFDAVKKWREAGNIFTIATGRNKFSIFEHIERHGLEFDYLIANNGALVFNNKREVIFKDTIDDEVSYKVIRFLHEKFGGTVEIANDNYIISVKSKDGNDILPFRVDKKINIEEIETVKDIIQINKMTPNAETTEIVANTINKEFEEVIAFANIRTVDIVKHTVNKANGVDFVYKLLKNNNKAIDKILVAGDSNNDIEMIKRYDGYAQINANEKIKAITNKYFNFISDIIYKEL >gi|343385480|ref|AEM20970.1| LD-carboxypeptidase A family protein, complement(365546..366502) [Brachyspira intermedia PWS/A] MIKPKRLEKGNTIGIITPSSACPKDKLDEGIEYLENRGYKVKLSKHVFDNYNGYGGTDEARAEDLNNFFKDDEVDAIICSRGGYGAVRILDKLNYDIIKNNPKIFAGYSDITSFHLAFYEKTELITFHAPMVSIDMVKGKSFDEASLNNMFDVLESREKIIYKNPDGSEFESISYGNDSKAEGILIGGNFIVMMSSFCTEYFPKLNKDYILYIEEVDEKPYKIDRIISTLFNSKEIGKSIKGIVVGDFENCDLVEGEKETGFRTAKETIIERLSNLNIPVLTNVKCGHGKTKLTMAHGAMVKIDAKNKSFETLENVLI >gi|343385481|ref|AEM20971.1| conserved hypothetical protein, complement(366513..366929) [Brachyspira intermedia PWS/A] MKSYRKVLEINYPKRRGYINITPEVQKCLNESGIKEGLVLCNAMNITASVFINDDESGLHQDFEVWLEKLAPEKPHSQYNHNGYEDNADAHMKRQLMGREVVVAVTDGKLDFGTWEQIFYGEYDGKRVKRVLIKIIGE >gi|343385482|ref|AEM20972.1| hypothetical protein, 367405..368829 [Brachyspira intermedia PWS/A] MKKVSKKVKFLAVLLGSLLISTSAFAVELTIDNSAVKRATAGQFSTDSDKVNAKDIFDLQRSFFSAGYLGQASGAISGDGNGTATAKGINNGVQGSFGVALPAGMYLGIGAAYNLNDSANYETRKDTISGTKWQINSTANFIAALRINDMAAVHYNFILYGFTGTPFIYNENHTKNPNEDYKTYNNYGSWRHEIEAAIKFGEHKLTIPVSVTFNAMNTKEKGSKYLNTGTANSKINVDNVNYVEGDGIWLGLEPEFFLSLPAGPMTGINMGLNLEAKLTHNVGKNGVFADQNQSGTGTPTYTKNEYKTTQKAAVVDLGVWASFPMEWSLANDQVSLAMEPQINLEFVINNTDKMEQSVNGGAATVINNIYGSDYLSIMPVIELPIGTLWRPVEWYELRFGTALLLGADITISQAKDANGKANKTTSYQTMSGIAGFFGMGFIVTDDFNLDLYAEAQQLNFFTMGFGGQLTYRFN >gi|343385483|ref|AEM20973.1| hypothetical protein, 368849..370267 [Brachyspira intermedia PWS/A] MLKVFNKIKFILFGSLLISAYVFAQGTDTWVLDNSAVKRATAGQFSTDSDKVKSKDIFDLQRSFFTAGYLGGTSFSANGGGTEDLGVPPFNNGVQGAFGVALPNNMYLGFVARYQFNDSANITKDKNGNTTGTGNNLWTINSQAALRAAFRINDMAAIHYYFRMGPNTGTSSYIYSVGQTINKDQKTDYATIYNDGIWTHEIAASIKFGEHKLTIPIGIVFHANNRKYQGKYLDKKEDYVDYLGEDYISLYLNPEFNLGITSGPMTGITVGANIGFGVNNNFGQNGTSTVASGSTETKYEGKQGKDRFAMDVYASFPLSWSLANDQVKLAMEPKLSLGLSVTNTGNSSQKIGNGQTTGYAGYNGEVKFIPYAELPIGTTWQPVEWWQLRMGTALMIQAETTWATYVPAKADGSLDETLKTVTTKLTTKAGIAGFFGMGFMVGEDFDIDLYAEVNSLSVNNLNFGGQLTYRFN >gi|343385484|ref|AEM20974.1| hypothetical protein, 370290..370799 [Brachyspira intermedia PWS/A] MNKKLLLILSILMSLSLFTMSCAKSVTAPNQIDQSSTLDISKVGSSISTYNYGSIITDGDVQIDLKNVQYSPMNGNTVTLTYSPTTTSTQPVVFNENSILNKIAESLQSVTYYANGVSSISVGNWTKYEYSSSSAQTVNYILTAQAIGKYGNKLDFTFVLTTSGNITWQ >gi|343385485|ref|AEM20975.1| hypothetical protein, 370876..371025 [Brachyspira intermedia PWS/A] MNKKLLLILSILMSLSLFTMGCANSVAAPDIPITGQGITKTDIETELKK >gi|343385486|ref|AEM20976.1| hypothetical protein, 371139..371405 [Brachyspira intermedia PWS/A] MPNDGTGGWWSYTCDPNYVLSELRQRISALSSTKMELVPNTDWDNGTTPNGQVSVYLTVNISSKFLTIPENLKSVKIHLMANWGTAQP >gi|343385487|ref|AEM20977.1| hypothetical protein, 371504..372019 [Brachyspira intermedia PWS/A] MNKKLLLILSILMSLSLFTMSCAKSVAAPDSITGIVGGEVLTEEQAKVKINSALNSLGKIYDDTLKTGYFNFSVGSLTFDGNRRYVFFLNFNQTGVDTPYVKEAEILNNLKTALQSYNGEVIFTPDANWISSPDNITSGYYILRVSISSLNYNLPNTIKYIYIYLYANFWQ >gi|343385488|ref|AEM20978.1| radical SAM domain protein, complement(372186..374597) [Brachyspira intermedia PWS/A] MSENLKNEILELVKSEDIIKPTRYLGGEINAIIKPDMPFKFIMCFADMYEIAISNLGLSILYEVINSIEYASCERVYAVAEDFEKLLKEKNIPLYTLETFSRVKDADVLGFTLQYELIYTNILQVLELSQIPIHRDERGEDVPIIAAGGPSVFNPFPLADFIDVFLFGEFDFEMKNFVDIIYNLKKNGAKRDDILKELSKLEYAYVPKYPREHVKRIFVENINEMPYVKKPLVPLVEGIQNRISVEIARGCTHSCRFCLAGITYRPVRNRTIEKIVDIAMESLEATGANTLNLFSLSADDYPHIGELIEYLQTLGEHKGFSLSLPSLRIDSFDKDTADRIAQFRKTGLTFALEVGSHELREKINKEMDEDAIYNILADVQKMGWKIVKIYFMIGFTDNPDKEADEIIEALEKMIKVSNNKVKINAAINVFIPKPHTPLENNNQLTDEEAITYIGKVRDHFRGTKVAIKYHPPRMAEIEGIISRGDEKIGDIIYKAYKKGARFDAWVEYFKYDVWKEVIEESGYTIKELLSKKINTPWKCIDTLVSQTFFDKEYERFQNGKFTDYCFTGNCQNCGIDYKKYCHKYKKEVLNTNFTQMVEELKTLKKRDIFAVNYKVLMKFKKEGISSLLGMHDLSRVMICALKIAGASIALSKGFHPLEKVVFTPPTPFACESEAEYMEISLTDSMDIDLLKNKINNLLSHIGIEIINAVSTPLNAKNIQALPKNTIYKIETDNDEEALKTLSNKEDLKTSEERKGDYLAIKKGDELLITLLESNEKAIRVRDIKSYLSKNNINIKNIRKLDLV >gi|343385489|ref|AEM20979.1| hypothetical protein, complement(374791..375132) [Brachyspira intermedia PWS/A] MKDILKNISYNKVTIICIFCYADYTILANRYNDRIFNKKRHISLSINNQYPIINNITKFHEKININNVLQSYNQIEEEVFGNHTLKINTNNIDKDFNIICNNIIEFIKNIKQS >gi|343385490|ref|AEM20980.1| hypothetical protein, complement(375190..375390) [Brachyspira intermedia PWS/A] MNIIIFTGLPASGKTSISKHISNILGIKCISKDDLKVELYEKYGFTSNDEKKYLSTIADKRMYKKL >gi|343385491|ref|AEM20981.1| hypothetical protein, complement(375409..375807) [Brachyspira intermedia PWS/A] MEVINRDYHKKYCPGKFEIGYDFFVNRLKEAVNIYGKGNVWSNLVFGLEPIESMLELCKEFAKEGIVISANILHLDKGNTLDCKMPNIYDAIYFFYNLEKINNEYGFLPFYCSKALRTSLSNEVYDKRIIKL >gi|343385492|ref|AEM20982.1| hypothetical protein, complement(375816..376646) [Brachyspira intermedia PWS/A] MSININCKDGLYNIKEETFLKASILTSGIIFSNNTIKLLKDKNIKLQNMVYNMPINSSKDRPQELIITNIDDNYKTVVSCVANNNDIREVEIDVDNEGNFIALVDGKKIDNINIDFVKEPNYYKALLSNGEYAKKYISSCGLDELNIIPWKGCAISKMCRFCGVNNFINDGEVSAFTFIENNNYWEEYKKEYINNLKEAILVAKNEECFKEHMHLILIAGNLSNSQLDLESKIFAEIAKEIFPLVNDKTTEGIVLVITPPNDLNLIKEFKKSGIKK >gi|343385493|ref|AEM20983.1| hypothetical protein, complement(376656..377672) [Brachyspira intermedia PWS/A] MIVIIIILWKQEKIFGFINFNYWILIMKKLCLITYTLLGETFTNELYKISDRLNFKLNGNFKVVVYCEELFQLEYRDYEIKLIKKSSTKYKRLIDLIDTDDSEYFISIDNDISVNMENIEKFIDIAINNNYEIAWGKIYSNTHNNFISKIIAVDKLLSHNIIRPLLWKLNIGISVPGQLFCIKVNSFKNKLIYMDTYLDDLALGLYANTNKINKYITSDILGYEKLNTKFKKLCQQRNRWAIGYSSILKKVYKNYRYLILILIHGINYHALWILHWIIIIYIFKLCYQLSLIYVLLTAFIIINKKVELFIYSIIYQFFFPILHIKWIIKVFTELIKKE >gi|343385494|ref|AEM20984.1| hypothetical protein, complement(378151..378864) [Brachyspira intermedia PWS/A] MNNNISEKIYKKIKKLRLAAPYYNNAFKYGVELNKKLDILVSKQIASMMISNEEIKIIEKYIKNNNLKIDSVKGGKTNIFYPKNMYRTHMDYDFLSSNIKDAFILINYLINIRGFRLVVGGSVPFSFKTVFDNQKNETLTGHIHLEKVLQDRYQVIIDINMGGFPLGRTSLIKCNDNGKLDLEDLICITLAHLFKHEHAFIKDINDLYYLLESSEVNKELLLKKSMIITLKIYFFNL >gi|343385495|ref|AEM20985.1| hypothetical protein, complement(379023..379442) [Brachyspira intermedia PWS/A] MNNNIFNNSIWAADYIVESSGIACGDQLSIYIYNNNGKIFFTFLCFSCSISKKFAEYLEISLSGKSKEEILINIERLKNKKYLDCEKWILDIPRHRYACIESVINTLASIFKEDKICSIEEAEIKNEPLACDACVSVKK >gi|343385496|ref|AEM20986.1| hypothetical protein, complement(379435..380631) [Brachyspira intermedia PWS/A] MKNLRNDFPIYRNNTKLVYLDYAATTFMPDNVISAWHDFHSNIGVSINRGSGILSDKASEIYYNSKKELLNFFGASSKYDIAFTKNATEGLNLMANTISNFLNAGDYILMSPYEHHSNIIPWNEIAKLKEASIIQFPILDDGSLDYNFIYNIDYKRIKIISLSLISNVTGYLLDLHTIKDIAKLTNAYTILDISQACGHIKLNFDAIDADAFVMSAHKMYGPKNIGACFIKKDLIDILPPFLLGGGMVWNTIGGNIQWHSGARKFDAGTFDIGLIYAWSKACIYLNDIDMKNIQSFEEDLFDYTKDKFNDLSDILDIIPYVNKSSIFSFDIHSIHTHDIAEILSKNNIEIRTGHMCSQNTLNIFNKTSLCRISWGIGSFHSDIDKLVEIIKKETKRYE >gi|343385497|ref|AEM20987.1| hypothetical protein, complement(380662..381645) [Brachyspira intermedia PWS/A] MRILFCQLRNHGDIIRTFPSIEAIKINNPNYFIGYTCFEEMQETCSLCKSIDIIIPQPKFSPVTDTQGGTRILDCSIFYETIEKVKKEKFDLYIDFHGVFQSAIFGMMCNIKHRLGRSKETSKDGASLFYTDIYSIKEKNINRMFRHFDLCQKIFPNIKPIINNYAQNNNNIISIFPGSSKMGILKRLNINKYLELANLLSKKSEVQFVLGKEDDDLIEVVKKSGFNFIITNYLEIILDKIINSKIVIGNDCAYTHLAIWKNIPTIMICGPTSEVINGVWKFGKGKTIKIESDCICSDIWNNKCHNNHKCMENITIDYILDSIEEFI >gi|343385498|ref|AEM20988.1| hypothetical protein, complement(381645..382334) [Brachyspira intermedia PWS/A] MNNIIYGQYDSNKYQLKRFYINDVPSYILNIIKELSYKKLAIIRGGMSFIFLLSKNDYMLKDIDMIAYYKNQNDILKILSNNSEIIYVNKNSFGNTVITSFWKCSYFHLDEYYKLDILLTEDIIDYDECIWNGNKYYCITKQYLLTDRISKIREKFQRNHDDNKTKNHFYVSYYLSEYMIKNNYIIDKKYKDIIREKLIGIDDILKNIVSDNEIDLFFNMQKQLIGSFQ >gi|343385499|ref|AEM20989.1| hypothetical protein, complement(382331..383023) [Brachyspira intermedia PWS/A] MNVFDELYKVFNSIIDNNNIKSPIPIFSFEGLPGVGKTTQIKKVSKYLSEKVGKVHYIDLPTSSPIGSILKSLYSDEKKWNEIRIKNPWLNPVMLSTDLIISINNAVENGAKYAVMSRGILSTYYYNIDAYGEEDINIIWSKMQYHMKAFYKPTAIIFMNLPEEEAHKRILKRNRGPLREMDKIEKMKKDRLVFDDFIKRLENIPIHYIDALGSEEEVTDKIIKELKIYL >gi|343385500|ref|AEM20990.1| putative membrane associated zinc metalloprotease, complement(383179..384510) [Brachyspira intermedia PWS/A] MLVFVHEMGHLLAGLAVGIKAEAFSIGFGPILFKKEIKGIDFRFSAIPFGGYCKFKGEIAEDGKVEEGDFLNMSPLKRIIVYFAGPFFNYLFAFVLLAVLVSMPSKIDLYSPTVSVFKDGRYMHSKSGITLAYEYGIQSGDTITAINGIKVESDNDILKTINDEAIQKAAENITFTLNRNGETLDIVIPSVEMLKALSGERALGLYFGNDLIIKNVIADSAASEAGLMAGDKIISINGMNANNIADFRPIVMDNASQKINITILRNGEEITREAIPRPVTSKALGTYGSLGVEFDSTPMRVEKVAGIPFPKSIPEAFKETGNYIVSYVNGLKLLFTGKLSVRENLGGPVRIIQISSQVISVDIEYRLRTILSFTATISLILFLMNLLPLPVVDGGMIVFSFIELIMRRPIDRKVLTKIQAVGAAFLITLAIFITINDITQLFR >gi|343385501|ref|AEM20991.1| hypothetical protein, 384962..386284 [Brachyspira intermedia PWS/A] MIEYKSYIVTQNRDYFLSHNMEYINLKNSSIKKILKNNKKDNSLINIFLYDNDKNKLYGYYEIDFNNRKQIDDNYISINISDNYKRRRGIYYKLEDKYSDFSIYEIDLKTFSKLKDRLILLNDNISQTFFSCSIDNNIFKYQAIETYPSLYVAEYEKHFDNKAYESIYKEYIRLLKYSNSENNNIDRYIELGSYLMNMLIPEKDFRVHLLDGFRIVYLHLDDKTYSIPWDILSYDGKFLSENIIFSYSNASNILHNKKSDNKKLKMAIISIPNDDISYDKQEIDSILSLQNNIKNIEIDLYKKEHNYFEFVKILESYDIVHIITHGYKDGIKLSEDYILNSVTALQNPPSLIFINACNMEEADNKLTKSLLSSGVATVISGIGSLADGKYLDFIYSFYSNLLHKYARINTAQAYYFAYVEVKEFYKGFIRYRFNGVPIYV >gi|343385502|ref|AEM20992.1| N-acetylmuramoyl-L-alanine amidase, 386277..387308 [Brachyspira intermedia PWS/A] MFKLIRFIYLLIIILAFTSCNNNENITPIRTRKIAPKVSSAFKSPAYNLRIKYIILHYTALNDDLSFKVLTDPGVSAHYLITTKKDEPIYKLVDDGDRAWHAGITMFDNRYSMNDSSIGIEIVNLGFLKKVTNTYEELNRMTQKQRDELFFTSYDEYIEFEESQIEKVAYLLKDLIEKYEIKPYNILGHSDIAPYRKKDPGPKFPWKRLHDEYNLGIWYDEYDYSNFLNDDEYKKAKVMDIKEEFIKYGYTSMPTNNVWDLDSRKVIYAFQCHFRPEKIDGNIDNETYAVIRALNLKVKKINEMDERSKANNFLTNTFFTNIFISNNIISTNWNYNTNRSFRK >gi|343385503|ref|AEM20993.1| tetrapyrrole (corrin/porphyrin) methylase, 387317..387991 [Brachyspira intermedia PWS/A] MLTVYIAARDIGNYKDNTERLKEVLIESDIVLVESFREATTLFKALNINKNKECLIEFSEHTKKSKDIDEIITKIINCKTVTLISDCGTPILEDPGRLLLEYCYAHNIKVRPVAGVSSVTAAIMCLPFNFKEFYYAGLLPRDDREREKKLSYLKRLNVPVIILDTPYRLGKVLNAIKKVYSKDKEIALCLDITMESEEIIIDRVSDICSKYQENKKREFVIVIS >gi|343385504|ref|AEM20994.1| putative restriction system protein Mrr, complement(388601..389488) [Brachyspira intermedia PWS/A] MALLKTREYFKYVLRFFYEINEAVHRSKIYEKIKEYTNPSEEDLKLVKGNGYFKFNDRVDWSLTYLKKAQLIENIERGVYQITDFGKKFYEENPNFDFKTLKEKTPYLENSKNNSDDDDIEEIEDENRNEIEKSIEEYYESVEKDILDRLQSMGDNNVDKGTKFENICLELLEKMGYGKKYRTGGSGDRGIDGTLTMDKFGFDMIGIQCKCYKENNKVNDTEITKFAHGLKNVNGINRGIFITTSDYTPQAKKVVEELKDVKIILINGYRLAKYMREYEVGVKVLETRNIYDVII >gi|343385505|ref|AEM20995.1| SCP-like extracellular protein, complement(390061..390909) [Brachyspira intermedia PWS/A] MYSKGLKMKYCKKAYLILLSLILFTQISFAQNNDEANQLFKLINDERKKSGLNEYKAETQLQNAANQRVKEIANGIRKSTALKDNNIQFASYSEGSIIADMTADEVFAQMLKSQRNLILNNKFTHAAASVYENNGKKYWVMIYVVSRNDSIVKQELNIQKERERVVELCNEARKQNNISVNLVLDTKLSEAAQKRAEELIKLFSHTRPNRTDFSTVLKEYNITYKTAGENIANGQFDADDVMKSWLKSPGHRANILQKNFGKIGVGVFEYNGRLYWVQVFTN >gi|343385506|ref|AEM20996.1| conserved hypothetical protein, 391070..392632 [Brachyspira intermedia PWS/A] MKYIIALTGATGNMGLETLRQLMEIEDIELVKVLVRKESKKAGEKFKKQYGKRVEIIPGYLYERDDCEKLLKDCHYVLNLAAVIPPKSDKYPKLAHLTNFVGVKHIVDILEAMDKNKRPKLVHISTVALYGNRNEKHPWGRVGDPLLISPYDAYSFSKLKGERYVLDSSLENRAIIRQTAMLHSRMLTDNMSDGLMFHTCYNAPLEWATARDSGLLMKRIIEEDIKGNLDDYFWKGCFNLGSKAENRLIGYDTFNDGFKLIGGSTKTYMKPNWNATRNFHGLWYYDGYKLEELFSYQKESVTDYWNEIGKTHWYYSLGKIVPPSLISFFAIQRLLPHPNSPTYWRRNGEDGKIIATFGSLENFDNLPKKWENFNLLFENKDSEGNYIDYKALLDIKNAKLLNHGYDESKKDSEIDLEDLKKAAEFRGGKLLSTSMTKGDLHTKLKWACAEGHEFEASPFTVIKAGHWCEECMPDYTWNFDMLAKKNPFFAQVWYDSHKEDENMLYYFDEDFKAHHKKIDQ >gi|343385507|ref|AEM20997.1| hypothetical ferrotoxin domain protein, 392729..393670 [Brachyspira intermedia PWS/A] MSENKKAVIYCFSGTGNTEKAAKEYKKIFEENGVETLLYNVGDNFDNMPNPKDYDYVGLAYPIHGFNAPYPIFDLIKLFPKLDKKKIFIIKTSGEPLTINNISSEPLMARLKPKGYILTNEYHYIMPYNIIFRHTDEFAAKMWKTAKALCVIEANEVLQGKECFLKKFPFGRLIAFLFRIEHPAMKVNGNLFRVKKICTHCNLCVKKCPVNNIYNDEKGNIKFKNKCVMCTSCAFRCPVDAISIGILNFWRVNGVYKFENPPTGIKGKHDNYCKKAYDRYFADADKKIHSYIDNAEEEYKQKSYYKNIENYIS >gi|343385508|ref|AEM20998.1| hypothetical protein, 393749..394681 [Brachyspira intermedia PWS/A] MIKKSLAILIALLLVFTISCKKPAEGNIEDDYINEIEKEYQNSSSNDVVVETNNGVSNNNTSDNMSSALDNNFNNQPVNNKPNQNINKTDNNTSSSSSAAAPAKKRPLKATIYNFYSPWTSNDDPLMIREIRVMIANKEYTQALNYINKLDFNNLPEDVDVGHLYQFKGIVHYFLAKEGKSNNTVAKNHITLADECFKKVAGLTSIEKFKPLSLLWNGMLYQTYSSDKNELQEAIALFDRVITEYPRTRFANDAVFYKAVTMKKLGMPENEYNDLFLSIKRGGFVDTLVFSQVINDYVPANDLVDREMLK >gi|343385509|ref|AEM20999.1| hypothetical protein, complement(394765..396399) [Brachyspira intermedia PWS/A] MVYIILSAIVLLILIIILIKKILNNKKTLSPKYVKKQIEELTKKINEDEKDYVSIYQLAKLKEEIGEIEEALKMYEKLLQVSFFKEKEELEICQKLESFYENFDKNEEAFKYTIKIARLDSNNMPCNIKTGTTLCNEGYYVLACDYFNKAILNKNEFDTDNLKAAAFSFFKTKDYKKSIVFLEELQKRLAKENDKDIDNINQTLISMYMLSDELNIARGFIEQIIISKHINNPLYIDRIYLHILYKVLDNEKFRELYDNLYKKYNISNPNKKISDLVLDYSFYSYFLRDITLSKRLFEIINDLKLPELNTYNFDLIIKYLSDISKATEQLNKLRNLMKLDNSKNDNYEKYVEKEDIQNWERAVDLWEGSFIDISYLSSLITIQNNINVKKILDELKINDDKSNNEMSLKIVQKVDKIYNMNIIDFKKLCQNLIRTKLSYSIIQEYTDAASKSDYGDEVNYITYNTKGNKKDTTLISFKRWKKIEIGELLIRDFQMMINESGAKNGILIVPVTLSNSAKSYVSYNDKITVYSRNQFNNLLKDEKL >gi|343385510|ref|AEM21000.1| hypothetical protein, 396638..397189 [Brachyspira intermedia PWS/A] MISNIASVKIANVLSLAVDGGTFLYPLAFTIRDMAHKTIGKKNTQKLIIVSAIINIFSPIYFYIISQIPADASWEFNEAFQLTLSPVLRIAIASILGSTLSELVDTEIYHLFVTKITKKHQWLRVLVSNAFSIPVDNLVFVAIAFWGALPFDALVGIFIFNFIVKYAVTVISVPMIYLVKDKN >gi|343385511|ref|AEM21001.1| 3-oxoacyl-(acyl-carrier-protein) synthase III, 397225..398202 [Brachyspira intermedia PWS/A] MRASIKYLSSYLPENVMTNYDLEKKLDTNNDWIVSRTGIEERRIADKKESTGDMAVKAVSKLKDKGAVIEDADAVIVATSTKSYTFPSTAGLVQKAFNIKNSCLAFDISAACSGYIYALNTAASLIESGECKKVLIVAAEKCSDILNWEDRTTAILFGDGVSSALLEASSDDSKGIISTDIGSESNDEILIVKGGGSVNPITEENVEDNTNTISMAGTEVFKKAVKTFDETINKTVKNADLELKDLSLIITHQANTRIMNAVAKTLGLNDDKFYINIQKYGNTSAASVGIAFTEAFESNAIKEGDYVLLTAFGAGLTWGSTLIKF >gi|343385512|ref|AEM21002.1| C GCAxxG C C, putative redox-active protein, 398218..398637 [Brachyspira intermedia PWS/A] MTLYEYLYSGFGKAEDLNCAEKMLYGANKVYELGINRNDLKLAAGFGGGMAVGITCGILTGGIMAFAKAFIEDRGHEGTLLKEIEAEYINKFNEKMNSINCDYLVEHYRDEEKGCDYLIFEAAKIFDELMEKYKDYRKI >gi|343385513|ref|AEM21003.1| hypothetical protein, complement(398745..399002) [Brachyspira intermedia PWS/A] MAQKQKIELNFSDVDDFHFKKPLKGYMLKIAEDHYVIGNEDLAIKSTGKTPKEAAEMVKEQFIVLANDIMYKSKYAPLSERERKK >gi|343385514|ref|AEM21004.1| hypothetical protein, complement(399002..399784) [Brachyspira intermedia PWS/A] MNNKINFLFILILSLFITISCASKYSYVRVDDIIDKNRTIAVASFTFPKSMTNEYWDRLKYLNTEIYTDFVLNSFISNFNSQNEMVKLVTLQEAIGNKEFANLPHHSILGADYVAATGTLATNRLSEETLALLADKVDGVMYAESAMSFWSQKVNIDFEIYDMDGNYLWIDTLNGASYYIIGDTGAPTRQTAYEIVIADVMKYQKKHAEELYIVIDQAISNGVSGLKGKVPYAFNTNDIIFTQKTFSLTNEDYAKKAGIY >gi|343385515|ref|AEM21005.1| hypothetical protein, complement(399815..400483) [Brachyspira intermedia PWS/A] MKKNIILFIFAVSSMLIISCSAKDVTLRRIEDVHKAEQKLAKNPDDEETVLEVLNAAQNGGREVRAEAIWVLGKIEADIAYSDFLRASVEDPDFNVRCLAVLGLGKLDANNPEAIDRIKRAISDTDLQVQIEGLKVAGRMNAKTLLNSILDSLSSKNKWVRMAAVEALKDYDDARVDRSLNLLASTDKDYAVRSTINQVIEYRKNKKNSKAEEEIKETASAE >gi|343385516|ref|AEM21006.1| alanyl-tRNA synthetase, complement(400494..403097) [Brachyspira intermedia PWS/A] MTHLELREKFKEFFKSKKHAIEKSSSLIPIDDPSLLFTTAGMLQFKPYYAGIKKAPYSRVATIQKCFRLSDLENIGKTARHHTFFEMFGNFCFMGDYFKKEAIEFAWEFSTQVIKLPIERIYVSIYEKDDDAFKIWNEHIGVPKEKIVRLGKKDNFWGPAGDSGACGPCSELYIDMGEEKGCGKPDCFVGCDCERYLEFWNLVFNEFFQDTEGNLSPLPNVGIDTGMGLERLCYITQGVESNYQTDVMKPIVDAIAKKLNVKYDDKNKTKINLIADHLRALVFVISEGCTPSNEGRGYVLRRLLRRALKTASDLGHKGSFLNEITSSVVNVYKEIYDYLPKEEENVKRILKDEENKFINTISAGMNKLYAVMEENKESKVISGKDAFMLFDTYGLPIDITEEEAADHGFTVDKAGFEEAMEEQKKRSRGAGEDKRSKFGYVENYETKYVGEETDNLINGVNAKIVAVYEDNAKKDKTSSSNAVIITDVSPFYGEMGGQIGDNGYIENSKKEMIKIIDTQKKENTIIHIADCSSNSLSVGEEIKLFVNFDRRCAIRKNHTATHILQKVLELTLGSHVNQAGSFVNDEYLRFDFTHPDSISEDTLISIENQVNEVVFKSMPAVIKYMPKEEAIACGAKALFGEKYPDTVRILDIGNGFSVELCGGSHLTNTSEVGYFHIVSEGSVASGVRRIEAITGLKAANEASKLFSKVKNLAHILNASKTDELTVRAESLQNEVKKLQKEIKQLKTSGASAVSFMDNFEDLKGIKFYNLEFNEDIKEVRLYADTIKERVKDSIAVMISKTDSSNSILVQITGNALKEKKLSANNIIKDIIAAAGGRGGGKDTFAQGSIENIEKAKEEINKLKSKWL >gi|343385517|ref|AEM21007.1| serine endoprotease, complement(403314..404801) [Brachyspira intermedia PWS/A] MFFLNLGLTFTLVGIIISFFIFSYEKNYKKDEFLVHAQAAPEKTAFTGSLDGALAVENAIRDVVDKNMPAVVNISTEIEAGQTEEDRYADEFFRFFFGDQMPRQKRSQKSLGSGFIINEEGYVLSNYHVVKGATKIMITLYGEDGELPAQLIGYDEAYDLALLKIEANNRTFPYVALGDSDAIEPGEFAIAIGNPYGLNNTVTFGIVSAKGRSDVGANKYQRYIQTDVAINPGNSGGPLFNIHGQVIGINTLIYSTSGGSIGIGFATPINLATSVMTDLKENGRVTRGYLGIYLQDIDENLSRGLNVKQNSGVYVSEVIPDSPAAKGGLQDGDIIIEYDGEKMTKSGDLFNKVATTKVGKEVNVKYLRNGRERSTKITIEARVEDEEVVPTRQSQNNSQGSTRSWMGLDVSNITPEISQRLQIRSNERGVVVLNMTQNSKAYQYGLRPGDVIKAINGITISNTDDYDNFVKSYGNDKSFTITIKRARMTYVIIIE >gi|343385518|ref|AEM21008.1| putative lipid A biosynthesis acyltransferase, complement(405067..406020) [Brachyspira intermedia PWS/A] MAYKSPKVIMLEYIPLRILMEIMAFMPYIFVILFAKLIGTLMYYLVPSARKVALINLKQAFPEKSFHERKVIAKRSMKSMMMTFAEFIKSSRMSDEQILKRIKIEGQDKFDEAMNKKKRGIIAITGHIGNWEYIAFYFAIKKYHPGVIFRPLDNPKLDTYMRSWREKRGMKCIPKKGDLREIFHVLNNNGPVAFLCDQNYLDGVFVDFFGYPAATAVGPVAIAMKTGSPMAILYSLPDRYGHHKIIIHDIMYIEEKETKEETIKHNVQRYTKKLEEIISKYPENWLWVHPRWNTRPKGQPEIFTNIIIINSFLLCFF >gi|343385519|ref|AEM21009.1| hypothetical protein, complement(406037..408040) [Brachyspira intermedia PWS/A] MGDIDNTRDRLKLDELNKDARKDLFNKFVDAGGEVVPDKKKDNNVLVGSSKKGQNAVVGGNGGRGSKGSSSANTKNDSKNNKSSSAVSVQNKKNTGLFFNIKLWFNALSSGVITLMGGNVNPKFLNFIDKNVIAALLEMDTLIFNALNPSEASDIDAKAKHQKVISQFAKTLDDLELLERIKDQYNEGVYKDFLRPYKELNSTVMAESYVKEIKAMFRPLYVLHAYSSRIKLAGEKAMFAYAMVDNISKGIVNSRISAFKRAVDLIYGKYYPKLFTLLQYASKEPLETINDFNRYLNITDEDILGYYTKIRKEKEKLQETKIQQAKENIGKQKDNEEEKLSKVESIGVKLIDKCVSFKKSDNNIEYEADPFFIVPIKDKIYRIKVLIDFLDREYSAVFVSNKVRYNLVYDNQVRTDYKNDFNNIFLSLSDTNSRLNEYSELCKTINKVEEDKTMRFEQRVSMLSDKNGQRSYLAKNLRNTYVSIITPFKRKLDKLLLDKEERERIIENPNDILTFSAEIGKGKKRIQGYNVMKALTEAYYFISGLNYLITQGELSGAGILIEGDDNEEQDISIAQKQETIENTEASNNTLENVNAENNTGTENENTENNVENDENQISETEESNAENSDNNITDPNEIVLGDDGFNESLEDEDLFTESESEDENLKQ >gi|343385520|ref|AEM21010.1| Short chain alcohol dehydrogenase, complement(408062..408841) [Brachyspira intermedia PWS/A] MYVENIKGRTAFVSGASAGIGEAVAKMLASNGVNLILAARRIEKLETLKNELEKNHNVKVTVIKLDFSKPEDIVKAIDSLSDEDKKIDILINNAGLALGKDFYYNNPIEDSLQMIRVNCEGLIVLTRLLLPYILKSKYGHIVNLSSTAADEAYSGGAIYCATKSFVEMFGDSLRIELIDKPVKITNIKPGAVNTEFSTVRFKGDKEKADNVYKGFNPLYAEDIADNIEYALTRKSHVQISSMTIMAENQGSATIIHKNN >gi|343385521|ref|AEM21011.1| hypothetical protein, complement(409336..409836) [Brachyspira intermedia PWS/A] MNKFIKLFIMTSMVSLFVISCGSGVSRERPEGWINDDTFRVMGMGSPAEDIDIDDKFRRELTSKQAAELDAKNKIVARIVGSYIESLSSTEKGMIDEYVIQERVAGRIRGASVVETKWDSKQNCTVVMELYSKGLKKQVDALITKYLNEVGMQYTAQDVAGMVETY >gi|343385522|ref|AEM21012.1| hypothetical protein, complement(410050..410547) [Brachyspira intermedia PWS/A] MIRKIFNVAISISLLLFAVSCGTGVSRSQPEGWINDDTFRVMGMGSPSDDIDDKFRREVVAKQAAELDAKNKIAAKIVGSYIESLSSTEKGMIDEYVIQERVAGRIRGTSVIESKWDSKQNCTIVMELYSKNLKKQMDNLVTQYLNEVGMQYTAQDVAGMVRTYK >gi|343385523|ref|AEM21013.1| Leucyl aminopeptidase, 410716..412191 [Brachyspira intermedia PWS/A] MKLKHTINFIKKHTVAVFVKVEKEQLKVCSFNEEYIKLFNSLVKDKYYNTSTPFAFAFASNTRVIYITYKEVKNYMYETWKNAGASLVKIMKDLHIDDIEVDMAELFAEIASEESYIQFCLGILLSSYSFDNYLGNKRLKEQSNIKNILLVSEHKKDTENAISKANQIASSIFWARDMVNEPSNVINSLTFVDRAKKQAESRKITTTVLTEKELKTLGMNGILGVNAGSKNPPRVFIAQYKKAKAKKHILLVGKGITFDTGGMVLKPSTSMLGMKDDMAGAAAVCGALFLISDMNLEANVTVICPLTDNKTGSAAINPGDILKMYNGVTVEVVNTDAEGRLILADALAYGIKKYNPDFVIDIATLTGACSIALGRHASGLLSNDEALSAALKEAGNDTYERVWELPMFDEYKEDIRSDIADIKNSGGRYAGVITAAQFLSYFTEGARWAHLDIAGTDMSDVNVKYISKGATGVGVYLLAKTVEKLVDIDKF >gi|343385524|ref|AEM21014.1| TRX-like [2Fe-2S] ferredoxin (Fd) family protein, 412590..412859 [Brachyspira intermedia PWS/A] MASNVKTVIEVCVGLHCSMKGAYGLLEAIRSHYDLEIGVPSSDGMLLKEMECMHNCHNAVPVLINGMECTKSSFKSIIKYIEAIHVRKR >gi|343385525|ref|AEM21015.1| DH dehydrogenase, 412856..414019 [Brachyspira intermedia PWS/A] MKKFVLHSENNIENIQSYRDHFGEYLAVQKIGNSFFEDLKEYPLFKRDITQTSIYQLLTDGNIKEDYILVNAASFDYLVFKDKFLLKNNPHLILDGSVFIAKILNIKRIDIILKDYYLEERDILLKAIVEAEDANFVADIEINIYDEYGYYNKYNIRITPSFLENKKYIFDLETISQIAYLAHIGGFTFKDYGNGEYKGSNILSITGDIINPNLYEFEMYTPLRNIVKAAGGTVKEYTIKCVFTNGFLNPPIDFETFQKMTLDYECFDSLNMKMGNGGICFIQEDRCIIRVVVKIIQFGKSISCGKCSPCHYGFDLCEYYINRMLLGNSNFDDYSNLKEAVEMIKIGASCLYIRSLANCILSAMEMFRDEFVYLIENKITLYSFLKS >gi|343385526|ref|AEM21016.1| ferrodoxin, 414050..415447 [Brachyspira intermedia PWS/A] MIVKFNVDGKTVSSQKGYTILQALSYINIDIPHLCSYKINSTNTFEEKNNILRCKLCLVKVKKKNENDYSYKYACNEIVENGMSVLNEHDDDIIRYRTSLLKAMLYMHEPICESCKADYICRLKKYLDIYNISIEASPNAFDENDINLIELKNILEKMNLPNFINANFERCINCGICEDYKVIDGYNSMITDLCPTHVFEVQRDIDNKINDDISTVRSIESFCIGCNHLCDAKYSYIDYSIKDISSPNGKKYGICDYGRKLDYYSNNTLEKPFYSGMQYEFDEAKELYHKFINDIEAESTLALNSSMYPIEDIKAFNEFIDSLGIQNLIFKKNRMATNSKNIRDNYTNINDFSIRDLKQDIKHSIFDDNYIYNEKFKKFIIVGDSLDDSDNMIDFAKKNKGNYIVFSPNFSVLAYNAYLSFPISYLGEFEGHYIDNHGKVKEMQSFLKVSKNRMSLRELLKYLYL >gi|343385527|ref|AEM21017.1| Glycerol-3-phosphate dehydrogenase, 415627..417180 [Brachyspira intermedia PWS/A] MPKTRAEILHNSNKKYDIIIIGGGVMGATIALKASRVGLSVLLLDKHDFAFGSSSRTSKMLSGGFNDMNSKNLMYTIHRVRERNNLMYKASSEHFGIINPIYEHSSTGLLREEIKMMLYDMFSLFGKGKKHKSHSRNETLDALPDLINNDVIASVEYYEGLLDDSRYVIELLLKAEEFGADILNYCEVKAFEYNQKEIENVVFTDHISGRVYTASAKTILIAAGAWGHSISSLLPNGNFEDRLVYVKGSHLIIDSDLIHINKSVILPKIKSRPNVFLMRWKNNTIIGPTIKKNTHDLDCIYTTSDEAEYLLDIYNTYFSSIVNKNHIITTQSGMMPLNPSQVKIHSHPQYRLFLVEGGNFTTSSAVTMKTLVKMYGKPYKWFSNQKVVNNKFDKNAELVLNEDLVKFLIDYFGSVNLILKLNELCKNDSSLLVEVGLDYRINRGLIKYFVEVEHAMHLDDIMMRRLRFILTENDCGTLISEHIAEEMANILKWDKSRTEWEIKRYRTEIKRARVALF >gi|343385528|ref|AEM21018.1| HisH, Glutamine amidotransferase, complement(417182..417814) [Brachyspira intermedia PWS/A] MTAIIDYEVGNLFSLMSSLKYVGIDAKLTDDEKTIKEADALILPGVGAFRDALAKLERRKDGTLKNTIIEEAKKGKLILGICLGMQMLFDKSYEYGEYNGLGLIKGNICPIEKDLKNKDLKVPHMGWNNLNIKKEDKLFKYINNMEYVYFVHSYYGKDCDESIIADSEYDVQIPAIVKNENVYGIQFHPEKSGNTGLNILRGFKDLVQKS >gi|343385529|ref|AEM21019.1| imidazoleglycerol-phosphate dehydratase, complement(417955..418572) [Brachyspira intermedia PWS/A] MENNKMRVSEIERNTNETKIKIKLNIDGTGKYKNNTKVGFLDHMLDLFARHGRFDLETICDGDIHIDYHHSVEDVGIVLGKCFAEALGDLKGIKRYGNFSMPMCEALTMTAVDICGRSHLVFNSDLKHEKVGDFDTELVKEFFTAFTNSMNITLHINTLYGENTHHIIESIFKGVARALAQACEIDEKYKNEVLSTKGMLENNKN >gi|343385530|ref|AEM21020.1| hypothetical protein, 418687..419136 [Brachyspira intermedia PWS/A] MIDSESLNSFNDYKHRITKEDVRDKIYKDSNIEKKIKEGVENYLDLSILKKYSDNAYSEYDYLNNYMLITTEVFEEGYIICDIHIDVNMKIYDYMSKGDNKNERYIALDNTYLMGLNLKFSLKEIDDDIENIELRFFNIYGISDNLHQS >gi|343385531|ref|AEM21021.1| glycerate kinase, complement(419442..420572) [Brachyspira intermedia PWS/A] MKKIIIIPDSFKGSASSLEVCNYIEKGVLKVIKDADIIKIPVADGGEGTVESILYAAGGNIKKINVKNPEGKIIEAKYGIINKDKAVIEMAEASGLTLVDDKTRNPLKYSTYGTGEFIKDALNNNIKEILIGIGGSATNDCGIGMANALGYKFLDKDNNELEAIAENMIKVADIDDSNVDKRIFDIKITAACDVKNPLYGKNGATAVYGKQKGVTEESFDILDDGLKNIAKIIKEKFGKEIDYMEGAGAAGGLGGGLVAFCNAKLKRGIDAVLDIIDFESKIKDASLIITGEGAIDGQTKEGKVPVGVAKRAGNIPVIAIVGQIKEGAEIVYDLGIKSIMPLCTKAMTIEESISNTALLVENASERALRFINIDLK >gi|343385532|ref|AEM21022.1| transcriptional regulator, CdaR, 420952..422079 [Brachyspira intermedia PWS/A] MYIDNEMAQRLLDKIMKVIDYEVNINIMNEYGEIIASGDKGRIGKINLGALEVLKNSENMNYFNFIDNEKESSRPGINMPLIFNNELIGVVGVTGDPKEIKLIANMIKMTTEILIEREIDIDKKTLKQTTLNNYIYKIISKENHKYLSSINIWAENNGYSFNINRMVCLIKIEKNNDYDIKKISECILNKIKLIKYFSNQDIISHIGNGQFIIIKSLNDNDKNKTVSLFFKYLRKEIKIQFSVMCGCIVNSLDNIPNSFEQANFLFNYIEYTNNDIYFIEDYILEYIVLNEGYFSSSMILKNTLNIINKNSTFKETIITICKYDLNINKTCEKLSLHRNTILHRMKKIKEILGLDPIKNHTDRIKFYIIAALLEK >gi|343385533|ref|AEM21023.1| Sodium dependent transporter, 422312..423811 [Brachyspira intermedia PWS/A] MSHHHHRGQWGTRAGFILAAIGSAVGLGNIWRFPYMVASNGGGAFMIVFLLAMLTAGIPIMILEFSIGHKTHKSAPGALKALNPSWEWLGWLQVFTCFAIVIYYSVIIAWSLSYGLFSIQGLKWGTDTAGFFTKEYLKLQDGFSLSNFNIGVAIPLVIVWIIILVSVIGGVKDGIEKANKIFMPLLAILVVIILIRGVTLPGALAGLDYMFKPDFSKLTNPKIWIDAYGQVFYSMSVAFGIMITYSSYLPDDSDIANNAFMTGFADTSFSLFAGITVFSIIGYMAHTQGKPVSEVAGSGGIGLAFMVFPEAINSLPGLNGLFGVVFFLVLSFAGLTSAISLAEVVISSFIDKFHFNRKKVSIVIIIIQGAISMVYATGSGLSILDIVDAFINNYNIVVSGLIEIILVAWVYKLGSFKETINTVSEFRVGNWWDFCLKFLTPVFLAVMLSLKLINDFKTPYGGYPTWALFALGWSMPVIAFIAGILLAKFKDRQPNIPHQ >gi|343385534|ref|AEM21024.1| variable surface protein - VspC, 424132..425217 [Brachyspira intermedia PWS/A] MSYSSIFGMYGDQDDWIDFLTDGNQFRARMDQLGFVLGNSTIKGTFGFRTQSSLTQLGYILLNNKVGTYLGATISGGIGYTSEAFSIGLGYNYTTASFLPTSDNFGSHTPVLMINALNDNLRIVIPVQILVHNGSIDQLGSYRDNYLGISTDTQIRYYTGIDAFNEIRLYVKYGQLGYKFNTQEVLARSFGFETRFYFLNTAVGNVTINPFIKVAYNTALHGFSTMVRALDGMYEEIGGYSNTTVSPQANINAKWDKNPYDVTVQAVLGVTANSDIVSLYVEPSLGYKARYLGKMQYEKVNYDFKVNHYLSWGAYAELYITPVKDLEWYFEMDVNNSDSYSTGTPVSFASTTGITWYLPEF >gi|343385535|ref|AEM21025.1| Zn dependent metalloprotease, complement(425311..426018) [Brachyspira intermedia PWS/A] MFGYFEYYFGYIWILIPGIILGFWAQMKVKSTYAKYSRMENKRGITGAQTAKYILEGYGIDIPVERIGGTLTDHYDPSSRVLRLSHGVYDGTDVAALGVAAHEVGHAIQHNRGYAPLSIRNGFYPLCAIGDQFGPFLVLLGIMIGGAGSFSYYIMMAGIILFAFAVFFSLVTLPVEFDASNRAIKILDKGGFLDSEELDGAKKVLSAAALTYVAAAVTAILTLLRLLMLAQRRRD >gi|343385536|ref|AEM21026.1| putative leucine aminopeptidase, complement(426392..427342) [Brachyspira intermedia PWS/A] MLYSCSNAKANTAQKENNQKINENFYFNADNAYSYIKKQTDLGPRNYGSEAHKKVREFFKQEISNLGYEVYSHNFEAPYIKGRKGENIYAFLKGKTDDYVIITSHFDSRSVAEKDPVLFNRDKPISGANDGASSSGVLLELMKALKNYNDLPYSVCFVLFDLEDDGNLFDVEGDSLIETDWIQGSIAFVNEIILRDKILDKQKIKFGILLDMVGSKNAKFRYESFAHTYYSTIYDKVWNYANNLGYKEYFIDGHYGTIIDDHTPFLNERIPFIDVIDMGYPFHHTSQDTIDKLDKKTLEAVGKTLEYTIKNADKVY >gi|343385537|ref|AEM21027.1| periplasmic flagellar filament protein FlaB3, 427683..428519 [Brachyspira intermedia PWS/A] MIINNNISALNANRQLNLTGNSMTKTIAQLSSGMRINTAGDDASGLAVSEKMRSQYRGLQQATRNAQNGISFIQTTEGYLNETTNIMQRMRELAIQSANGIYSDSDRALIQVEVNQLVAEVDRIASQAEFNKMNMLTGRFAADGQTPMTFHIGANMDQRVSVNIGSMTAANLQVGGDTPISISSVETANQALGRIDEGIQMVVAQRAELGAVQNRMESMVKSLMIATENTIASESVIRDADMASAMVAYTREQILQQTGAAMLANANMKNQSIMRIIG >gi|343385538|ref|AEM21028.1| fumarate hydratase, 428630..429472 [Brachyspira intermedia PWS/A] MREIDVNLITENVAQLCIDANIYLNDDIKKALIESEKKEENKIAKNILNVLIENADIASKELKPICQDTGMAIIYMDIGMDVHFTGGNLTDAINKGVALGYTKGYLRKSVLNDPIDRKNTNDNTPAVIHYNIVDGDKVKIIVAPKGFGSENMSKIKMLPPSAGIEGVKEFVYETIRTAASNACPPMIIGIGLGGSMEKCADIAKRALLREVGTKNEDIRLQKLEEELLENINKMNIGPSGFGGNTTALAVHINMYAAHITSLPVCVCTGCHVTRHREIVL >gi|343385539|ref|AEM21029.1| fumarate hydratase, 429518..430048 [Brachyspira intermedia PWS/A] MEIKKLNTPLTKEKLSVLNAGDMVALTGTIYTARDAAHKRLIDMLNNNEKLPFDIENQTIFYAGPSPAKPNEVMGSIGPTTSYRMDAYSPKLLELGLLSMIGKGKRSKEVIDAIIKYGGVYFAAIGGAAAYMSNCVKSAKIIAFEDLGTEAIRELYVEDMPLIVAIDSKGNNALTA >gi|343385540|ref|AEM21030.1| RNA methyltransferase, complement(430433..430735) [Brachyspira intermedia PWS/A] MQLVKHENENTFLEYCNNNNKRIVPITKFGKHRYDEFQYHNNDILLFGRESTGLRESLWENDLENSVYIPMSDNIRSINVSNTAAIVAYEAYRHIVLINN >gi|343385541|ref|AEM21031.1| hypothetical protein, 431079..432572 [Brachyspira intermedia PWS/A] MNKIEEFNQSTSKYELYTHLSEKIVSGEIKTFSEIFTYAKNVNFEKVHDHKKILKGLFDLIRKINWGFFNNLDKELYPKLWSQFVTENQKYNFAGDLKLSLSIADIYIAMLDIHGYTKFCEENKNNLSKMHALDDLMQNKVSEVTRFYNVISHRKQGDEIIMVCPTATDALSATIAIIGVLSKKRLLNEYPSVDTSGLPEFKISAGISGGNTNSSLIITEDGDLSGFLINNAARMQARANTLAPKENKVIVTKNLQFNFLKENSKVKSEIFEKDIISFYDNGMISFKGTEIPIVEAIFNPDEKYKEHFFTEMEELVKSVKGNLWKQRMFTAILDLISKVAKSMPPFQIDEHVNEYISSYTNSTICDLCDKANGAYVVKENYKEAIDTFALIIKLLKTIPDFDKMVLEYAESICAGYEKVLPIYDVVIKKDIEANISEIFPANHIPIFQNVQKANETYNKLMNIAMSSKTLKRRKSIWYGILEKELPNLVINMYSGKK >gi|343385542|ref|AEM21032.1| hypothetical protein, 432704..433453 [Brachyspira intermedia PWS/A] MSLKNLKKLILIISSFSIIACSQTQGGSTSGSKTSSDSLAYLKGGEGEWVLKVDDFAINQTNFTKDLQASLVLQGATAEQIAMYANDATTKQIYADQLINSILLLNKAEQEKFFETEEAKDFINLSIRNIKFQYYVTKLMADASKNIPDPTPEQAQAFFEQAKQQLTQMYGITAYNTETAPYIAQLYKNAYAQQLVERDIQDLKDKAVIERNTAVLGEASILPPQIGDSNATALPQQGVDNNLLPRTNN >gi|343385543|ref|AEM21033.1| translation initiation factor IF-2, 433858..435816 [Brachyspira intermedia PWS/A] MEAPVEDVSSFKKDNKKDNKKRDYEKKDKEYDKKSSQKDSKAEAAQRQENKIFNKLQAKKRQQEQRLASVEKEISIMETITVGDLAKKMNLRASDIISKLMGMGTMARVNDIIDSDTATIIADDFGCKVNVISLQEEATIEVKEDREEDLKPRPPVVTIMGHVDHGKTSLLDAIRHSNITSKESGGITQNIGAYKVKIPSGEIAFIDTPGHAAFTMMRARGAKSTDIVILVVASDDGVMPQTVEALNHAKEANVPIIVAVNKMDLPNASMDKVKAALSEYGLTPEEWGGDTQYIGVSALTKQGINDLLEAIILQAEMLELKANPNREAIGIVLEASLDPGRGPVGTVLVQNGTLKIGDYFVCGLSVGKVRAMVNDLGQRVTKALPSTPVEVLGFEKTPEAGESFNVMLDEKEAKAIADKRVQLKQQEALKANVKVTLENLYEKIASESMKEFKVIIKADVQGSAEALRDALNKIQSDKIRFVSIYSASGAVTESDVNLAHASNAIIIAYRVRPSGKARELAEKLGIPIERYDIIYEAIEAIQNAMKGSLERLKKEVDIGTVEVRDVFHVPKVGTIAGCYVTNGKIERNAGVRVMRDNVLIYTSKISSLRRIKDDVKEVASGYECGASIENFNDIKKGDVLEIFKIEEIAQDL >gi|343385544|ref|AEM21034.1| translation initiation factor IF-2, 435841..436020 [Brachyspira intermedia PWS/A] MRDNVLIYTSKISSLRRIKDDVKEVASGYECGASIENFNDIKKGDVLEIFKIEEITQDL >gi|343385545|ref|AEM21035.1| hypothetical protein, 436111..436644 [Brachyspira intermedia PWS/A] MKLHTILFSFLIILLISCTKNTGVIVTNPDSNLVLDKIRYGNFQGIKLEGNILTITGSKNGNNGIYKYVDYYLSISADFVSEKGNNLWVLPAGSQVYVVSLSAEGKELVELMTSDNPEYSKVLSNILKQASNNDGKIDTTKTDELLKDVNLSESELAALADKLIKVSDDFAKAESIK >gi|343385546|ref|AEM21036.1| hypothetical protein, 436661..437575 [Brachyspira intermedia PWS/A] MNKFLIIFFVFIFSMHTGFSKGLPLSTEVTGEDYSWIKGRQMISFNLNPGIAVFTPMILDTVFKHGLYTIGMFGADLGNAGKYLQYVRLNSFGWYIPSIEYSLFVHNQISLSAGIGLYGSEYSFYVSKDKVLELLQSVGGSGSDIGSFIVGDSKFNTSVIIMPVTFGVKFYGKKRQFYNHFRLAIDAFFYDIQTENGVTGVKTSQTVSDAAVYISYEIGWNIELFPTREWRVKPTIDIGLLEIGYYVRPWADNMANALYGNLMAFAVGGFLGELSNFSTLPDWAKILLNFRIGLFPRIGFSIRF >gi|343385547|ref|AEM21037.1| hypothetical protein, 437590..438255 [Brachyspira intermedia PWS/A] MKKIIIFILLFNSFIYAASYENARHAVGIDFGTTLYSTVTLPLVGNSLFKSQNGSNEELFKGGFGIGFTYNYAYLPKQAIDAYIGIYSFSSYYNGTITINGTSSYQKAYNADVIVIPASIGVRFYFNKSNRDNGFFLLPKIGMNIFAVNGKDYSANKEELSAIVNFYISGEMGFKIDMFTKMGANWPVRPFIDISLLDLGYSFTHGLRFIWLPRFAIGVTF >gi|343385548|ref|AEM21038.1| phosphoribosylaminoimidazole synthetase, 438428..439441 [Brachyspira intermedia PWS/A] MGISYKDSGVSREEGYKAVSLMKEVVAKTMHTNVLNNIGSFGALYELGKYNNPVLVSGTDGVGTKLEIAFSMKKYDTVGIDAVAMCVNDVLCHGAKPIFFLDYLACGRLNGETAALIVKGIADGCYEAGAALIGGETAEMPGFYKDGDYDIAGFCVGVVEKDKIIDGSKVSEGDAIIGIASSGFHSNGYSLIRKLVRDYNAVYEGEKIGETLLTPTKIYVKKVLPLLEKYNIKGMAHITGGGLIENVPRSVAKGYKAVIKKDSFITPNIFNYIQYLGNIKEEEMYNTFNMGIGFVIIASKEDKDNIINDLKEQNESAYEIGYIAKNDNEDKSDICLE >gi|343385549|ref|AEM21039.1| phosphoribosylglycinamide formyltransferase, 439429..439989 [Brachyspira intermedia PWS/A] MLRVAVLISGGGSNLKSLIDSQDNDYYKIDIVIADRDCGGLNIAENAGIKAVLLDRKVYKKDLFKKIDEEISNIDLVVLAGFLSIVDSAFIKKWEGKIINIHPSLLPKYGGKGMYGIHVHEAVIANKEKESGCTVHYVTDTIDGGDIIMQTKVEVKEDDTADVLQKRVLVEEHKLLPATVKKLSKM >gi|343385550|ref|AEM21040.1| hypothetical protein, complement(440202..440726) [Brachyspira intermedia PWS/A] MKNNHEYYEMLISRHKDNDLDANEIFEMEKHLASCKSCQKFRDEINSMSSILLGMSNIKVNKKPASIFNKKRVIASISSIAAALLIFGAVSTIYNSNNIPGSSNDSAKLMVADLNDSIIRTSIDDYNTEEDYAPLSSYFSYGDLDPEAAEASSDESYNNAEISIMSAYIYYMGK >gi|343385551|ref|AEM21041.1| R polymerase sigma-70 factor 2, complement(440723..441268) [Brachyspira intermedia PWS/A] MSSAMAYEDNIDAFKTGNEEAYKELIEMYKKPLFNLVYSIISNKDEAEEIVQDVFVSFYIKRESFEGRSKIYTWLYRVSFNRAVDHIRKKEREKKYRLKEYRNSEVQESGNDDSIHRIILAEALEKLEDDFRIPLMMAEYENYSYNEISEKLDLPVNTVRTRIFRARKKLLSIMKKMGVSL >gi|343385552|ref|AEM21042.1| hypothetical protein, complement(441290..441748) [Brachyspira intermedia PWS/A] MNKIFYTVSLILLLSLSIFAQPGPKGPGPHGPGYGRNRRGGEFDKRLGHDPLQFFRKIGITLTDEQAERMYDIAIKFITEEEPIRLEIERIENSIRLELMKDNTDRNAIKKLIKQKKEQEALRDYLRIVRDLDIIGVLTPEQKAQLNSCMMR >gi|343385553|ref|AEM21043.1| hypothetical protein, complement(441831..442229) [Brachyspira intermedia PWS/A] MKKIMIIAILIFNIYSLYAEEHFIINDDSIKVLTDAGVDIDLEKKYTINSITKKYLKDARKILFEINKIDMKINDEFKKENVDLDSVKQLIFEKKEKEADFDYTIMSCDLDILSLFSDNEIKRIKYYIIFKK >gi|343385554|ref|AEM21044.1| hypothetical protein, 442378..443457 [Brachyspira intermedia PWS/A] MYKIIFLDEKLKTIKLLYDNKSNDENAMFSLMKYIKSKINGKIEKSDEGFLLFNDEKKYLFYILDNDAICIKVLMHNDKVAFANFKYMEKEFKSYIDEINILIAKEKIENINNSIKNNMWLDFMISNYGDNLNIVGGNDLSCSHIIEIIFKNASFVQCSKYFNACPNEYDIFHLCSNDEIEEVIKKYKNVINGKYSIMIKIKADDMNSYFYIACDCIDFIYKEVVYDYDFTSLYSADKENIIKKYDLIKEGDSWYQEKENSHKTLIFTDKFLNRNDTIGILFRIYKLCFAKVKYFRTYMFKFEPYKYDYKKGFIETELWDAEFFKHIDSGYMIDLRYLQSIKVYEDFIKLCNELEKIEK >gi|343385555|ref|AEM21045.1| putative acriflavin resistance protein, 443644..446733 [Brachyspira intermedia PWS/A] MLILGVVSLSKLAVDFLPDMELPYITVSTEYENAGPEEVEKSVTRIVENAVATVSDINTITSTSEEGKSSVFIEFNWGTDLAVATADVREAIDGIKNSLPDDADSPTVLKFSTDMTPIMEIAFFGTDNLGALYTLIDNQILNKIEQASGVARAEIRGGLKSEMKVDLVLNRLHAYGIDINSIVSLLSSENQNLSGGDTYEGVYKYTLRTMGEFTTPEDIENTVVALKTNDTPIKLKDIGRVYQGYSDDSEIVKINGMPAISVSVNKESGGNSVNVSKAVKRQLANLNLPEGVEYEILFNSADNVNQAINGVLDTAWQGGLFAVIILMLYLWNVKTVSIIAISIPISIIITFTLMYFMGITLNIISLSGLVLGIGMMVDNSIVVLENIFYYRNNGYGKYSSAINGTSTVALAISASTLTTIAVFLPFLFVEGQTGQLFRDLCITVTVSMIGSLFVALTIVPMLGARLVTNKKTKFLIPIENFVNDKFHSKINNLYSNLLKYSIKNKKKVFISSLSVVLIIIILGLIFIGKEGFPTSDEGQFKIEVKMPVGTKSEQTQAFVTRMEGDIQEAIGEDFDRMQSRVKSGSEENSAEIRVQLRDKSEGRKLSVDEYIEITRNRLVSYPAQINISAVTTSAIGGGGRNGGTGGQEIEIELVGDDLDKSTEIANNIIKAISDIEGIREPRLTRDDSNPELKIYVNREIAAKMGINVNTIANIIKTSFAGTTATTMTPANSDVTDIDVNVQLGEPDRLKIDDISRLMIPTTAGIVPISSVATIEKSYGPTEIERKDSTRITTIRASAYNRALNEIMQDVQENISTKVFLPSGFTINYAGDFEDMKEAFLQLIQAFILALILVYAIMASQFESFIAPFVIALAIPFGFAGSLLALFIGRQTLSVYSGIGFIVLIGIVVNNGIVLIDYMNQLMHEKNINGDESALESGPRRLRPVLMTTLTTILGLLPMALSGGSGNEMYQPLSIAILGGLLVSTAFTLIIVPTVYAAIRNKIPLKDYEKKDIESRNDFADYDTINVTGK >gi|343385556|ref|AEM21046.1| Methyltransferase type 11, complement(446811..447374) [Brachyspira intermedia PWS/A] MKETILDVFLRKYRINMVKSTIIKYNDCKLLDIGCGWEARFLQSIENYISYGVGVDFKPPELKTDKLETIKLTLENKLPFEDSSFDVVTMLAVLEHLTYADEILKEINRVLKKDGRLIITVPSKIAKPILEFMAYNLKIIDRLEIEDHKKYYNKKDILESAELSNFTVEKHKYFQLGCNNFAILKKQ >gi|343385557|ref|AEM21047.1| Na(+)/H(+) antiporter, complement(447888..449078) [Brachyspira intermedia PWS/A] MLLSLALIFLCGMILGKIFSLLKLPSLLGLIITGIILGPYCFNLLDDSILSISADLRELALIIILTRAGLNLDIEDLKKVGRPAILMCFVPATFEIIGMILIAPKLFDISLLDAALMGSVVAAVSPAVLVPKMLKLIDEKYGTNKSIPQLLMAGASVDDIFVIVLFTSFTSLVKGGNISYLDFVKIPTSIIFGLLLGVIIGFILSKFFSRFHIRDSAKVVIILSISFILVSIENSISNLFGGIIGISGLLAVMSIGAYLKKSKEELSKRLSLKYSKLWVAAEIMLFVLVGAAVNINYAMKSGALGIILIFAVLIFRMLGVLASLIKTKLNKKERIFSMIAYCPKATVQAAIGSIPLSLGFASGEIILVIAVLAILITAPLGAFAIDATYKKLLKHE >gi|343385558|ref|AEM21048.1| SpsE, Sialic acid synthase, complement(449369..450403) [Brachyspira intermedia PWS/A] MLKLKDLINKKGYFIIAEAGCNHEGDLSTAIKLIQEAAKSGADAVKFQSFTQKTLFAAKEYTKILKLKDDALDGVDNIILKKEWYEPLIKEAKKNKIIFITTPFSVDSVNDIVSYDIPIIKIASCDIDNIPLLEAVAKTQKPVILSTGLALNKDIKEALKILKKNEVALLHCSVEYPTPLQNARLNRISVMKNLFKNNIIGYSDHTIGIEAPIIAVSLGAKIIEKHFTVTPEKETGDHIISLETNAMSEMIKSIDKTLTMLGGDAASKKEHVLSKQEKKELVYAKRGIYLSHAMLRGEVITEKDLIALRPCVGIPAKYYNKVLGMKLKVDKKSNTALSFKDLKK >gi|343385559|ref|AEM21049.1| permease, complement(450675..452996) [Brachyspira intermedia PWS/A] MINIKTKLLFRKINKQLAIFMSAVFIVTLAVLFFVAVKTVYRDFKLSAENYFEENTLDDLVLFGMFDTNDIETLEEMKGIDKVVAKHRFQGKIDNIDAIIYGTDNSEDRINKPYVYEGKSELKTNEIAINKNFAEANSLKLGDTVELVFNEKTNSFVIAALVSYPNYVFLFKDGASTASEAKDFAVIEVHEDHFNYIPYNSIYIKYTEDANKQNVENLIRIKLKQKIFLFTDREQSVNYVNYEQTLLQIDSFSYICPSILLLMAILLLYIIQRRNVAVERKQIGIMKAIGLTDFSIMFMYIKYSFLVSFFGILLAFIASNFLLPPIFNALGNIFDMPNFNHNTYIDLWIISAVIILFVCIFSNLLAAISILKLNPAQSMRGEPPKGSGKSLVEKLPIWNKFSFNTRYAIKNASRSKTRYLASLWGMFAAISMTIFAQGFNNSFDYFLYNLYEKFALYDVVANINPTKWEDNSDILTNDGIKYYDKAAIYQARLYPAFDDNAESLYIPALIYKDSFSSMDIPNNNDKEDSVMIPKYLAEKLNIKENDYIGIELYTLGNSISRRVKVSTFVDQQGMFYVYIDKKFAEETFEIKDLYNSIFITTKDDFTKENMKDILDKTKEVSYYSFRNDEYEAYKNQIATIYLLVQILIFIAFLLGATSLYGVGVITLATRRYEFTLLKVMGYTTKEIMIASLKETITQIIVAIPLGIAAGYGILYLVKKPFSSKLFSFVPHVYQSSYILAIALLITVILLVSIMSAYYINRLDMVEGLKDREE >gi|343385560|ref|AEM21050.1| ABC transporter related protein, complement(453004..453711) [Brachyspira intermedia PWS/A] MSYLYEIKEISKIYGHGGGATQALKSVNLTIEEGKLTAILGPSGSGKSTLLNILGALDKPTSGQVLFLGEDISHYSNKRLAKFRRENIGFVFQSYNLLPNLTAIENVEFSTEITGLSRSNAEEALKLLGLENRVKHYPTELSGGEQQRVSIARAIAKKPKVVLCDEPTGALDNKTGVMALKILRDLNRNLGTSIILITHSKEIAKMADTVVKILSGEVLDKYDVANPLNPEDIEW >gi|343385561|ref|AEM21051.1| phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, complement(453715..454923) [Brachyspira intermedia PWS/A] MRILLAITSSISAYKTPFLVSHLKKQGHNVICAVTKNAQNMVGVKALETMSGNKVITDLWQEDDILRHIHINEETDILLIAPADVNIIGKIANGICDDAISTIACAYTKKKYFAPAMNPHMWANKANQKNVKYLIEELNYELIPPESGNMACNDEGVGRLADLDTIIKIVTSNNESLKYNNIRFTITSGATIEWIDPIRYITNNSSGKMGASIYEEISSNGGISTYIEGKVNDSLSVKNNDKKIKINTTKELQDNVLNELDNTDILLMAAAPLDFRPAQVFDKKVKKHNINTIELIENDDILASSKNKKKNGTLIVSFAAETAENDEELKNYAVDKMKRKDADMIVANKIQDAIGKDTNKITIFFKDGRFKTFPLLSKKECAKEIVSEAVSEWKKKNNITGF >gi|343385562|ref|AEM21052.1| PhoH family protein, 455398..456297 [Brachyspira intermedia PWS/A] MSVCGVEDKHLEILENKFNVSIYPKGNELTIKGDLVRIEDTIKVLYTLKDLYNSSAEITEQKVINIADNIYNDKENKFISMKIKLPYLGRNIEMKTVSQGEYLYKMQKSDIIFSTGAAGTGKTFLSVAYAINLLSEGKIERIIITRPVVEAGESLGYLPGDFKEKISPYMRPVYDALYSIISADMISRFTEEGKIEVAPLAYMRGRTLSRSFIILDEAQNTTISQMKMFLSRIGEKSKVVVTGDISQSDLPKNAQSGLEHALRILSNINGISFHHFEKKDVIRHHLVSKILEAYDNADY >gi|343385563|ref|AEM21053.1| putative metal-dependent phosphohydrolase, 456324..458816 [Brachyspira intermedia PWS/A] MNTNKKIVKSVLNKTPNIERFFQLSIAILLYFFTLFLVFPTYMQKVNIPNIGDIVTEPFIVKQNVKYENKEETEKVIYYTEAATSPVFDMPKNIEYEALSKISNMFSFMRISHDNNISIDDMYNQFLLTYDEPINKSVFSNAVVNDLNIGYEAKVIETVKELLGVGIISRGNLSSDTLSLILDNGIFVYSYDNYIVEEKLLPKNRVFFLEDLRAELPSMIGTKYRNLNINHINSISSIANAFLRDNLIYNSSRTKDKINALRHNVDPVYNVIKKGFPILSVGERVTEEKAELIRNLFGNNFGGYNVSIFIGQALFILLLFSFIGFIILRYKIPFYITFKNFLLFAIEYAVIIGITYIFYNHISYSLLDINIPFYVYTFIPMFSIINSLLGAKRGISSMITLCITLLAANVAQAGIFEISALFVISVLASILSKRIHNRYSIIFIGLFIGAYLSLMCLVSILLNDNIKINYLTFIFAFVSGFTQSILVMIFLPVIEYVLETATIFRLQELSDLNNPLLRKLQMNAPGTYHHSISMANLVETIAEEIGEDARLACVSAYYHDIGKMENPLYYIENTNKTENRHNKLKPTLSASIVKAHVRLGVEIAKKYRLPKEVIAAIKEHHGTSLIKYFYVEALKENPDVDINLFTYPGPRPQSKITAILMILDSIEAASRSLDSPRREDLEMLIEHIVDDKMSNGELNDSGLTLKDIEIIKKLSFQQIIASLHERIKYPELNNDNNNEEETNKKEEKKEDSKDKKEEKDSKKQIAKDVKDIKEEKKSKKVEKIKENIKEKIAKKIPLKHKGEKDAKELKYSKDTKENKEVKEKKRVKNL >gi|343385564|ref|AEM21054.1| putative metal-dependent hydrolase, 458830..459255 [Brachyspira intermedia PWS/A] MKVNVFNETNYDINIKYYKYFLYYSAKTADIDGEVNLLFCDDEYIKNLNKEFRNKDKATDVLTFPMGDINEGGDIVISYEWVVTRYSEEKIRKTILKLIIHSILHLKGIHHNYTRKSLMENHNKMRELYKKVIKTIKENKS >gi|343385565|ref|AEM21055.1| Hemolysin C, 459426..460103 [Brachyspira intermedia PWS/A] MVPRVDVVMIPIESSYDKVIKAFNRDRNSRIPVYKDGIDDIVGVLYVKDLIDAEEKNFSLKKILHKPLFVPISISLMELLKNFREKQIHIAMVVDEYGGFSGIVSMEDVLEQIIGDIRDEYDEEDEEVKSNDDGTYLVDARTRIDDFNKYDILPPIPDDEADTVGGFLFSYLGRLPKRNEDIEYNGYSFTVVGKSGNIVTKIRIEKLKKKTQKIKKINFHYKYRI >gi|343385566|ref|AEM21056.1| hypothetical protein, 460434..462476 [Brachyspira intermedia PWS/A] MKKFINKIFIATLITLFAVSCGNSPTNPSNGGGGGANPTPNEFVDKLKSIGMVKAGEQEWDFRTISQSGNVLTIKPMNNAKSGYLKGLDRYLSRKMDEIEETFKYRIEFNTSDSTASDGSQPNSKANSNPLEAKITFYDKKTDNPITDADFKDGFILKIEANANWAITPEVTAEDYKKSINQLGTINVNGKGGNTFAMDFAGLNVTKDQYNSYTADLTIDANGKTDTIDLLNFIDVINGQISKSKTEYLEISYVSISSENSFYISFNEVSANKVINGNVVLKVKFNGNLSFAKRDLNVTITSTPEIVTDNSGQYKESEFNVSTDAENISFQSTSIVEKTSTGITINNLYASYRKEDGVASITLQGNDILNAHKTLKSGETAEFEITFTASATGYNDKTDVKMTLKIKKGDDLPSVTVEDFNAWLNTIEVSGFTKQVGSAAITLTASSGTTPDTALNSIREALKKLSKDKIVIDDYSINSLEWDRTQSYPTENKDGIIKVRVSQSDNYVFGDELKQLITDQYGSTEFAITVKPQSSWIPDISITGAGSSASNPIRVNVGDGVTATDPIAYTIKLPENMKIDNILYSYLEAIEGINDDWKLGYTGTAQHLIFDNQSSIDTKINPELNIIPQNVKQPIVDNSDIQLNDTQKYKVEITISYGEHYMERTEKIYLYVELVKNHSV >gi|343385567|ref|AEM21057.1| hypothetical protein, 462551..462772 [Brachyspira intermedia PWS/A] MNINDNVTMNMNPDYAYDNNNNSVVLTDINTTGQGSVNYLNNNVNIDRIKAELQKIGINCSMASLTFAKKIRI >gi|343385568|ref|AEM21058.1| hypothetical protein, 462750..462908 [Brachyspira intermedia PWS/A] MLKKSGYDTTATAVINGLSGEQGYEFTDTTYGQFDPSANITIELTTSQTWLD >gi|343385569|ref|AEM21059.1| hypothetical protein, 463147..465561 [Brachyspira intermedia PWS/A] MKKFLYAIIIAVLSILFVISCSKSPTNPSGGGSITPEPTPNEFVEKLKTIGIVKAGSQEWNFASISQSQNKLTLQPTFNSKAGTLEGLKKYLDIKIKEVFSDFKYDVNIDSKNSKASDGNGDISKANSESLELTITFNDKNTGNPVTDADFREGFILKIAANSKWEATPKITADEVKEVLNKLGTINITANSGNILTADFGGLTVSENQSQYVSQLSIDNKTDTIDLINFKEIIEKEISKSVTGVLKITSISIDESAENSFIFHLEEVSANKILVGNLKLTVKFTGNAGFTERELNVNITSEANITSDNTGNDKSANFTLTTDADNLSFEITSITPKDSSIQINKTDITVSYREENKLGLIVLAGKKVSEIHNALQSSASFEITLTAKSAGYKDKANLKLILNIQKGNSYITLEDFNNWLNNINVNGFDKSVALASLTLTASADVKADTALNSIKEALNALPKGNITASSIDYLKWTEYPTSDKSGVIMVYVNFAQGYPVSDELKGYLSQDTSYKFKITVKPKSKWLANISIDGEGADSISPLNVDFGDGKTTPNEIQYKIKLPNGASISSITISKLNKADDITDNWNILNKNLKIFEDNLTSPSLKLIDSEIAYILQDIDIPKDTSQVYKVILSVEYNNNGTVISESIDLYIRLQKGYMLVTKDAIIKVLVQGLSGGKTFVSSTTPVDININSDAVLNIAGGTFELPNSFKVFEDATGAGSISYINQNINAVTMGDELRKVGLSFNSASLGFAKKKGDGKTAAANIRVSNIDGYIFDQDSLSGFNPSEGINIELYTPNQTWLD >gi|343385570|ref|AEM21060.1| extracellular solute-binding protein, family 5, complement(465763..467328) [Brachyspira intermedia PWS/A] MIFAISCSSSKNRNPKELFINAGEEPKTIDPTLSGNDFVYPRHVFETLITKDKEGNLQAGACESWNISDDGLVYTFNLRTNAKWSDGKNVVANDFVYALQRAANPLSGAEYTSFVEYIKNAVKILSSELPVEQLGVKAIDDYTLEITLEAPTGYFLDILTYPIFAPVRKDIIEQYGDQWSLSPESYIGNGAFVMTERNPDEKIVVVKNTNYWNKDNIVPEKITFVMMKDATLALAGIKDGSLDFSVYIIEQDLEKLKSEGIVNIAPYFSTVAFGINATNEVLKDTRIRKALSLAIDRNYIVENVVPTSKSPTSAWVPVGAYDVKGDFRENGGEYIDLSKEAYSNNVEMAKQLMAEAGYTNGDGFPVLEYKTTADLVYIQVAEAIQQMWKENLGVDLQISSMEWAAYQQMRSEKNYQLIRTLWIGDYSDPMTFLENYLSYRSQNTAGYSNKQFDNYIEAARNTANQEIRMKAMHEAEKILIAEDNLLIPIYNPSNPTLVSKRLKDYVLTPLQEYQFHYAYLE >gi|343385571|ref|AEM21061.1| ankyrin repeat-containing protein, 467550..468239 [Brachyspira intermedia PWS/A] MKKLISILFILILSIPLYSQTSRFKRLTPEQLTNLANPRRLSHRIFYTRASQGPNAKWFDAVKEGNLDEIKKMVEAGQDIEVQDTYSLKQTALGWAAFIGYLDVVQYLVSKGANLYAGDTADVTSAFKSAILGGNIDVIEYLYPLYNGKLDLNEQDKRDGETMLMVAAGNGREEAVKFLLDKKVDVNIVSKQLNKSAYTYACESRNQNIIKMISDAGGINVRTGKASCQ >gi|343385572|ref|AEM21062.1| N-acetylmuramoyl-L-alanine amidase, 468335..469279 [Brachyspira intermedia PWS/A] MNNKNRFIIFSTVIIVLIIVSFSSLIVTANTKVSETIVRENESNNIENPSKKFNDIIENRKVRILIDPGHNAATKGALGYLGYEYYMNLRVARELAKILSEDNRFEYFLSREGAYYSRPIKEYMTNNYEELLGIYNTKVKGEERTGNLTRYQTLELYAIRHYAIDNNFDLLLSIHFDYMPYISRRNKTSGFHVIVSPYNKEFPASMQVAYKLSERMQEKYKISPIIGHDRVLPNNVWKFYDKEELINNAISLRGLIVIGDAFENAYNKEEIKKDVPSVLIESGFIHEWKFESNRAVKELANQMYLALVDVYTTK >gi|343385573|ref|AEM21063.1| Peptidase, 469357..470259 [Brachyspira intermedia PWS/A] MYIKPKKKKNNNSKYLNKKENFLHLFFGKIGKFLTHRIYFMFIPHSKKKTKTLSLPVYSIIIIVLIISLSLLTTFSFLTKNTVLASKTEVLSGSYKDKLSEINSLENIFSSVVTNDYYRNDMSNIASLMKVDTNSINLSTNYVDNILLVNSRAEELEKLKMYLDELKANITSKNNALEPIPSILPIDSRYAVISRPYQEGSIISKGIGFETIAGTLIRATASGTVNDVSYDKDTGFTITIYHRFGIITKYSGLATSLVSEKMDVKKGEILGNAKTGIFDYELRIATKYVNPLIFTTVEYE >gi|343385574|ref|AEM21064.1| hypothetical protein, 470256..470486 [Brachyspira intermedia PWS/A] MNITENKKLQNGIKYAALGVEFGSMVLGLTFVGHYADKHFNSKPLFTIIGIFVGFVSGIYRLYKISKTFDKINKKQ >gi|343385575|ref|AEM21065.1| nicotinate phosphoribosyltransferase, 470496..471695 [Brachyspira intermedia PWS/A] MKPIINSLLDTDLYKFTMQQCALRQFSDVWVRYVFRSRNILEWTEDMHKELLKQIKYFCDLTFRKDELEYLASLRFIKKDYIEFLKLYRPLGEHIRALFDDNKLTVEIEGPWYQTILWEIPILAMISEIYYAYTVCRDDNGKKAYEQAEINLIKKIDEKLLPIHNSDNGFRFSEFGTRRRFSFDWQRKVVSILKEKLPPVCLVGTSNVYFAKTYDLLAVGTNAHEYYQVGQALDKVRLAESQKFMLQSWVNEYRGDLGIALSDTLGTDKFLKDFDLYFAKLYDGIRHDSGDPFVWGRKVIDHYKNLRVNPKTKTLLFSDSLNFDKAYNIYKEFKDETNVAFGIGTYITNDFEPVAKPLNIVMKLQSVNGKPVAKLSDDKGKTICEDEAFLNYLKIVAKE >gi|343385576|ref|AEM21066.1| TPR domain-containing protein, complement(471823..473295) [Brachyspira intermedia PWS/A] MMEHYTLEKIEEILNDNEFYSDDSESDEKEFIYNKEYSNIINVLKEYLKNDDKNIKKLFLLAKAYYLNFDSKSSIEILKKIIELDPQNDRALYWIACVYYSCNVINDALKNIKNAIEINNKDSEYWYLIGEIYDNIGNYTDASIAYKKAYEINYTEEVNNNKQYYAFTLGREYLKANNFDEAVKYIKKSLENFNNDNEIIHYLALSYDKNKQYNEAIDTYQKLLKIDYHSELEDFSSSAIDSLAKIYIKIGKNEEAINIYKKYIEINPSLWSIITKFYDKDAGIEQYREIINAYNDVMKENPTNNQYYYYLSELYKDIKEYNKAIELYNYAIEINPNDYNYYISMAALYEDIKEYNKAVEILKKVIEKDSNNIEAYIELGDLYEKLNKIDDRNEIYKKAIEIYKNDNDAYTFENIGNLYEKLGNIEERNRAYKKAIEIYNETSDIYHLEKQADLYIKLNDKNNAINSYKKLLEIDPYNNKALEKIEELKQ >gi|343385577|ref|AEM21067.1| flagellar hook protein FlgE, 473543..474868 [Brachyspira intermedia PWS/A] MMRSLFAGVSGLQNHQTRMDVVGNNIANVNTYGFKRGRVTFKDMISQSLSGAAKPQEDRGGINPQQVGLGMMVATIDTIHTQGALQVTGVNTDLAIQGEGFFIEKRGNNSYYTRNGAFSLDKDGYLVNPSNGYKVQGWNAVLNPETGEMDLNTAAGVEDIIIPVGSKDPARATANTKYFCNLQKSGETHQSDLTIYDSTGIPRQLRATFTRTDVNRWDMVIDIPDATEGSVSVSAGDPVEGGGNNTFQLVFNDAGSLISVSDGTNTQTEGVLMPNVSFTYQGTEGEVNQTINLTLGEVGLFNGITQFESPSTTKAIEQDGYTMGMLEGFSFDDSGQITGVFTNGNRKTLGQVALAKFNNAGGLEKAGDTLFVQSNNSGAANIGVASAEGRGSIKAGTLEMSNVDLSEQFTDMIVTQRGFQSNARTITTADQMLQEVIALKR >gi|343385578|ref|AEM21068.1| flagellar FlbD family protein, 474922..475146 [Brachyspira intermedia PWS/A] MIHITRFDGSILYVNPHQIEFMEETPDLVITMLSGRKVVTKDSFETVLNRIIEYRTRIVDEKTVKKPSFYGNEE >gi|343385579|ref|AEM21069.1| Flagellar Motor Protein, 475186..475977 [Brachyspira intermedia PWS/A] MDIIVPLGVFLVIGINLFGIIGGGGNVGHMIDIASAIVTGLGGTTSLLVANDMGTILGVPKAIKVLLHKPNYDEAQIIITLLSFSEKARREGLLVLEDDIQEISDPLLKKGMQLVVDGTDPELVKNILNTEIDNVEARHDTVRKVFEDAASLYPAWGMIGTLIGLVIMLRSLGGGGGVEAIGSGMAVALITTYYGSVIANGFALPIAGRLAARHSSEATVQSIMLEGILSIQAGDNPRIVKDKLISFLPPSQRQKVNEQVGDR >gi|343385580|ref|AEM21070.1| putative flagellar motor protein, 475995..476795 [Brachyspira intermedia PWS/A] MATIKFGKKAKKAGDKAQVPGPSAPLWLQTYGDFVTLVLTFFVMLLATMSSSVNDSSIQLIATAFQGSFGVMPGGTTLSQSRLIYGGATVDNLPSTDRGYSVGRSIDKATSVLESEIKSRKVRIEEDERGFIISLGADQYFESASTNLVDNQNNVETFIKLASVLSGLPNDVRIEGHTDSGSIIPGSITEQKFGNNWGLSSARAMVILEKIFENDQAGKLDRNKYSIAGYADTRPVASNDLPDGRALNRRVDIVVVRNDVTYYNQR >gi|343385581|ref|AEM21071.1| putative SAM-dependent methyltransferase, 476811..477683 [Brachyspira intermedia PWS/A] MLLADKWKDYKIIDCGEGEKLENIGGFLVSRPDSQVIWSKQLKKWDKLDAIYHRSDKGGGYWQYINKPKDNFIIKYQDLSFKIEFTNFKHIGIFPEQAVNWQFIIDKIKEKKSSTHINKEIKALNLFAYTGGATVACAYADCNEVVHVDASKKIVGHAQKNIEINNLQNKKVRFIIEDVIKFVLREIRRERKYDVIIMDPPVYGRGPNGELWQIETSLKRLVEECVKLLSDEPILFLINCYTASFSHISLKNILSTSIKHNGTFESGEIGIPIEKSDIVLPCGIYARFYS >gi|343385582|ref|AEM21072.1| Phosphoenolpyruvate-protein phosphotransferase, complement(477751..479496) [Brachyspira intermedia PWS/A] MEKRITGIGVSPGIAIGKVYLFLKKDLVISKCPCKEVNSEQARLLEARNKTKEQLIKIRETTAKKVSEEKAAIFDAHITLLEDEDLLEEVNNIIADDKVCAEYALSQGIEVYTKMLSEVEDEYLRERAGDLLDISDRWIRNIQGEDIVDVSNLPKDSIVIARDLTPSDTANLDLDNTLAFVTEIGGRTSHTSIMARSLELPAVVGVGENLKDLENNQIIIVNGNTGSVIVNPTKESIDECLKLKDEFDKKRALLKEYAHKDAISKDGTKIRVYANIGSPADLGGVLKNGADGIGLYRTEFLFMENTDFPTEDEQFRAYKEVAVAMSGHTVTIRTMDIGGDKYLPYLEMPKEENPALGWRALRICLDKTSIIRTQFRALLRASAFGKIKVMLPMIVSIEELRKAKAIFNECKLELMRENVPFNEALELGMMIETPSVVFRAEAFARESDFFSIGTNDLTQYTLASDRGNEKIAAICDPYNPSVLIAIKMAIEGAHASGIIISMCGELAGDLLAVPLLFGLGLDVFSMSAISIPEVKKMIISLEKSECQMLAKRVLSLDTAEEVKAELLRFIEIHEKGGTISY >gi|343385583|ref|AEM21073.1| Phosphocarrier protein, complement(479526..479792) [Brachyspira intermedia PWS/A] MTTGKVTIQNDTGLHARPGNEFVTFIKSLTGCKIEIENEAGKRVNASSLLKVLSLGVKKGSVLTVYCDGDNEAENLKKVEEFIANLKD >gi|343385584|ref|AEM21074.1| pantothenate kinase, complement(479979..480761) [Brachyspira intermedia PWS/A] MYLLSDIGNTRVKLGIFEEKNCKPLYYKAIEHSNALDLVNALNEIKNNHADIKKVFYSSVSLKVNDLFEGSIEDCFNMKPYRVTHNDIELKDNFYEPKDSVGIDRILSTYASICLEKISNSNEDKYASIVIDMGTATTMSIMISDFTFLGGMIIAGTKTSYQALSNVTSLPYYEIGPIQSIPNPINNNVKDAIMSGAIYNTIGTVNYAVSETKKYIKSKYNIKCKIFLTGGISNLKLLKCKVYPFLVLQGIYFNMIDKKQ >gi|343385585|ref|AEM21075.1| polyA polymerase, complement(480764..482158) [Brachyspira intermedia PWS/A] MKKIFTDIPHPIKEIARILYVEGFQCFLVGGAVRDSIMGITPHEYDITTDARPEDVQRIFKYTIPTGIKHGTVLVIIEDMHVEITTFRSDGNYSDGRHPDHVEYASNIEEDLPRRDLTINAMAYNILDGSLIDMFDGMKDIKRKIVKSVGNPYERFSEDGLRIMRAIRFATKLDFDIEKETFDAITHSTGMLASIAAERIREEFNGILLSKNPFRGLELLRKTGVLSLILPELMQGFGVNQNKFHKYDVYYHILHTIQSVEPLETEELTLLVRLAALFHDIAKPMVQKKVSKQDDPVYYNHEVVGASIAKKIMKRLKYSNSEIDFVTLLVRQHMFYYQDEWTDGAVRRFMRAIGVENIRPLLRLREADRLGSGNRKDKESKAIPKLLARIDKIIEEENAITVKDLKIDGNDLINEFNLNPGPLIGKILNYLLDLILDEPELNNREFLMEKTKNFLESNNIKDGV >gi|343385586|ref|AEM21076.1| chorismate synthase, complement(482254..483363) [Brachyspira intermedia PWS/A] MGSVFGNNIKLTLFGESHGEAIGCVIDGFPYGINIDNQFIDNEMDRRRAKNAKLATARNEADKVEILSGILDDKSTGMPIAAIIKNENKRSGDYSNLKTLPRPSHSDYTAMLRYDGFNDIRGGGHFSGRLTAPLVFAGALAKLALKEKFDINIAAHIKQIYNIKDKYPNNVFPTYEEFTDNYNKELSVFDNEAMDKMIKTIEEAKMNMDSVGGIITAAVFNMPAGFGDPFYSSIESRISQSVFAVPAVKGIDFGLGFEFVNYKASECNDAYTIKDDNNIKRVETKTNNNGGILGGISNGMPIVVNVVIKPTPSISKEQLTLNIETKEEETLIIKGRHDPCIAVRAVPVIEAAIAVSILDLCLDMKGKLI >gi|343385587|ref|AEM21077.1| methionine aminopeptidase, complement(483851..484645) [Brachyspira intermedia PWS/A] MFIKEVKEIVKPSIKDDDAIENIRKAAEIAQHSIDLAFKLCMSGVRASKVDKEVEKYIKSQNAYPANFEVPDYGFATSISSGNEIAHGRPTNNKILVHGEPVCVDVGVKYNGYYADCARTIVIEGGMGSVNHRAYKLIEACKKALEYGIYKLGPNVLLSEYGRTVENKVHEYGFSVIKSLTGHGVGYEYHEAPYIFNFYHPNNDVILEPNMVLALELMITNGTDKYEKEKDGWTLSTPDYSLAVHFEHTVLITQTGIEILGIKK >gi|343385588|ref|AEM21078.1| membrane protein, complement(484662..484925) [Brachyspira intermedia PWS/A] MEYIIVVSAFIVIGIIVSLIFSKILKIKVFGGWVMMFLIATVGALLGSYYLPRLSNIQYIKINLSSAVLGSFILVILLYIFTPRSLK >gi|343385589|ref|AEM21079.1| hypothetical protein, complement(484953..488462) [Brachyspira intermedia PWS/A] MYVSILINLIVLALFITFVFGLKKDAFDVDTKKLDRNALICQNSIVNLVKDYDERLNKIVDSYPFINLLQQVILNGIDTAERDRIISIFRSGNYPFDTVALYLADGKSVFSSPVKTKPVDLESYKNSKAIAFFDKDYDGVYFVKPIKNDRGIEVGYIVASVFKKIFENTPYNLNFVVLSNGVVYYNPSIDINSISIDSLTQYMNKDIGSTGNIEADNNTFAFYSGKVKDIDNFSIGILELNVPIVQKYLKYIILGLLSLSFIFLLTTALVERFKPAANNNIVNDEPEDDDIYDESEPPENNYANSNIVNDEEFNIDDYDNDIEGLDDESIKYLNKVDKITKNSKIDLPNLDEVEDIKVEDHDNNLNNIIDYEDDEIKLDDVLEDGGEKLKDDDEEDEDIKLEDLSSLDKVLENEDDDESIKLENIENLDDVLDEQNNELEDIPSLDDVLNEDNENKDDTTEENNDELDDIPSLDEVLDEDNENKGDTTEENNDEIDDIPSLDEVLDEDNENKGDTTEENNDELDDIPSLDKVLDEDNENKDDTTEENNDELDDIPSLDDVLDEINKNKYDNSKDTNDELDDIPSLDDVLDQDNENKDDSTEENNDENIPEMKEYSDEELLDSSNILDDDEDNNIDDTIEDLDDIPNLNDEIKEPEEDNEDDKNMLEMEEYSDEELLDNSILDDDEDNNIDDTIEDLDDIPNLDDEIKESEETDNNEEDNNENVPEMKEYSDEELLDSSNILDDDEDNNIDDTIGDLDDIPNLDDEIKESEETDNNEEDNNENIPEMKEYSDEELLDSSNILDDDEDNNIDDTIGDLDDIPNLDDEIKESEEIDNNEEDNNENVPEMKEYSDEELLDSSNILDDDNEEDLNDIPDSDDEIKESKEDDNEELEETVDNDNNSSDNDIIKGIDDIIDDNDDNNEGDILISHGSILEDEIVKKEEEYFSSSDAFNFSLNRDFLLGDYDDEENDSNNNESSNISPNFSEEYDDGEVIKPASEKDTFDTEDLIDRDLYDPEEVPKVPDDFYREAEEKVKENMTSNWKKVLKALRGKKFVNKNMNEMLEWVKEQSGLDIIHAAMLSRQDNGSYDIVESQNISDSTKDKLNISENEALFKKILSHKKTLYVSDPFASDSIKSKFDPEDRKDISHMIFVPIENDEGGLKSFFIGLSSN >gi|343385590|ref|AEM21080.1| hypothetical protein, complement(488514..490562) [Brachyspira intermedia PWS/A] MNENKKQKIMKTVLSLMISFLIIFIVAMFARAASNTVLPENNGIAVFINDYLDMMMQRVDKIAVKMKIKRNSVSEYQVNLITQSISDYVGYSMYQTSDSLKDFNPNNTPSKAQIDKYKNNYYKMTVENPYLRGMTVFNMEGKMLLNLYLSRNKSWPLELQDNLLNEIKTKGSLVLNATNENAFYIMEYIKNPYGEIIVTTRNDYAYVSDIAMYYQVADKRLYVSDARNSVYNVREAVGDNNIEKVSSVINRYAYYKKQPSFMVNDSLSVSMIGKEYPNYFELIVLAITALLILVCQLFIKAVVYFFKYLMQIKSNKDYVESIKGNDELINNNIVNTQLPKSNTIEEMPPIVQKVQYKIPDEYLKENNEDKKEDKFNIGKDILNIVSNIKEEINACKNKFAVDKKDLEEKIENLENKTEEIKTEIDIESAFANIKKDLQEEYDRAMEETFLDDSLYDMNNEEETYDDIKISENDDMIINDYEVEMQEENHDIAVINDYEIEIKEESDEEISNNEEFMSISDEELNNTSSNVITETLSLDENILKNNVLNNSEKEENDYQKIDNEFNKQIIKNDLLSSYKEKEEEKNKEYVRNLFNSKKTENHIKNDSHDISMDILNSYNKAIDNIKNKNENEKYEDSKDDAKTSDLDNASNSRTDDVFAAFDKMLSSIISKAEEDAKRSITKK >gi|343385591|ref|AEM21081.1| HAD superfamily hydrolase, 491068..491673 [Brachyspira intermedia PWS/A] MIKNIVSDIGNVLYEFSVNDFMNKYIDDEDKDKFMQNSFANKNWHLMDKGDLAFNDARKLFIEMNPKYKKIIDDLFDSSLTLCLNKNHNNISLLKEYKNKGYDIYYLSNMPSETFEELRKETDFFDNTCIGGVVSAHIKMIKPNRDIYEYFLNKFSLKADECLFIDDNINNVNTALEIGINAMQLKKIDDMKTILKDMLKQ >gi|343385592|ref|AEM21082.1| histidine kinase, 491681..493471 [Brachyspira intermedia PWS/A] MNFIKKILLKIKNRYGILFPSLICFFTLVNFIATLWISSFIYEPNITNQFYTFSVMFFPLTSIIIGVIVIIKFIVDAIMKKEGSHLKLVIVLIMGLMTVLPSIVISKISTYIIKTNLNLFLDQNINSSVEYVIDISNKEITEKQAFMSEVIDKIGINYFNNLFENLGIGYSEYEDISQMIKTSEYFSNIVFLSNSYNVNNIIFFNSANYIPLDINYKLTNTNTLFINSEYNGSFYVNAIIPLSYSNNYVIWSETMPKNYIEVRNNALESFRIYNSVNMFTNEFSMILSLLYIFILGISAFFSIILGIALSRLITRPISLILNATNSITNADFNIDMKLGGVHDMRNLIHRFNVMARALKYHRDRENTRARLETWREAAIKVAHEIKNPLMPIIMNAELIDRKISVNMTEKDVARAKNSSNIIIKNANVISNLVRSFSEFSFAIKLSDEKQSINGALIEVLESFKNINTIKFSVVLSKHDYFINMDREKLIMAFRNLIKNAIEAMEKSSRSVIYISSYHEIIDLNEFFIISITDTGIGIENNNLHKIFEPYFTSKEKGTGIGLSTVEKIISEHNGTIDVESIPDEGTTFFIKFMVES >gi|343385593|ref|AEM21083.1| response regulator, complement(493466..493651) [Brachyspira intermedia PWS/A] MDQCDRVHYGTKKLPNYDEFTIFFLYEDIDIDLEKEAQKHNIICMKYPLHINKLIKIIESL >gi|343385594|ref|AEM21084.1| hypothetical protein, 494100..495110 [Brachyspira intermedia PWS/A] MKITLDMSISKLLDAFDREFGVSLGIYKGAHKSDNIKLFEISDPRKNQKAFIVINKDTSVESAEAMFRNTFGIRVQIKDKNGNTVSQESTLGGIRKLDKGFVDSNNENNINLVDNDNEEINETSEEENKKKKKKKSYFLKPKIVKHTVEDKIKEIDKYYLGFQRSERYKSMLNLLSCIEEAKLTYPESKELADHIEEIKSKSLNISNLSIKKRRFAILVLIIITSILSLIGIGTWGYNLYKNIKKDREADTIIQEIDNLRIRKGSLMESGNISEANAIDESINSKSERLNSIQNESTLSIANYFIVAALFFAVILARFILRLNKYNVTSIRFGKNT >gi|343385595|ref|AEM21085.1| metal dependent phosphohydrolase, 495227..496366 [Brachyspira intermedia PWS/A] MPKIIIPLNEVKEGMKVASNIYNSDDKRIVDIGTVITKDIIETLKRNSITTVSVMELLDLKKENTVNTSGDGKKPVLRGVMEENGKKILKIDSQEVAKRQESTIEKTKSLYETAKKGGGIDFDSMKKEVNNMLSSIVENKDAHSYLSMLKRKDETMYKHAVDVATLAAITAGELNLTKVDMANIMLGALVHDIGKVLIQESLLSKVNLTKEEEAILKKHPTQGYKLVKRDNLDDNIADIVLEHHEKYDGSGYPFQKDNKDISLYSKIVSICNTFNNLITKGEHGVPCTPDKAVKIIISLAKKDFDSDVVKAFQKAVGFYPNNTRVKLSNGSIARVIEQNPNLPLRPVLSIVKHLDGTVSDGLEVVDLSTSNDLFIKEIM >gi|343385596|ref|AEM21086.1| hypothetical protein, complement(496373..496705) [Brachyspira intermedia PWS/A] MPKIIQYPLILFIIALIAKIIIDNICIIIKSNKFLNKYFKDKDKLYSLEEVSSAFRLEKEHFSQLLSTLEKYHYFSFFNKKGVTMVKDYYSRYELKYLVRLLSKKQKLKY >gi|343385597|ref|AEM21087.1| chemotaxis protein CheC, complement(496708..497181) [Brachyspira intermedia PWS/A] MFDLDVVNAFSKGTVIILKSYFNSKVGKGDVRIYRNANHVGGVIVFVGITGDLSGRLMFNMSKATAFKLASALNMESITSIDDIFIATIKEFVNMVAGSAINDLSTKHIDLDMTPPAILMSEQMSMLEKENDKILSINYKTELGEIFMNLILFNQTN >gi|343385598|ref|AEM21088.1| hypothetical protein, 497434..497697 [Brachyspira intermedia PWS/A] MFYKFFYKNKNANNKLISITVKGAVVNQGVYFCKYGISVSEVLEICGGMTELGFLPIGFDYNMPITNDTTINIQKRYSTIRKNYEEN >gi|343385599|ref|AEM21089.1| hypothetical protein, complement(499478..499663) [Brachyspira intermedia PWS/A] MIFSSKFSSSSKADKPSSSTSSSSLVKLSSDISLRSSSSLYSFFLNLDFLLRIQFLPLYYH >gi|343385600|ref|AEM21090.1| Uracil phosphoribosyltransferase, complement(505900..506427) [Brachyspira intermedia PWS/A] MRVLLKAEEYEKVLPRLAAEIIEKEDMDKLAIVGIRRRGDYLGIRLKKLLEEKIKKEVPIGAIDINLYRDDLSTLSEFPEIKETDIPFDITGKTILLVDDVLYTGRTIRAALNALFDYGRPKKVALLVLVDRFGRELPVSANYVGIALNVPQDQYVSVRVKELEGEDLVLLKDKN >gi|343385601|ref|AEM21091.1| putative flagellar basal body-associated protein, 506689..507234 [Brachyspira intermedia PWS/A] MADEENLDLEEGEEEEQAEAAPKKKFGLSPMIVKILMGIAAILVVALISGLIAFFVSKSVGKAAGVQGGVVDDMVKQPPPSIYRIDPEFNVNTADMDVARYVKVSIILTYTTNTKQLAVELPERFYMIRDRITTILSSYTYDQLRTNEGREQLKADIKREINSMLRNGQIDGILFDNFLLS >gi|343385602|ref|AEM21092.1| flagellar motor switch protein FliM, 507281..508312 [Brachyspira intermedia PWS/A] MTEVLSQSEIDALLSAISSGESLDNIDTKRVEVEHRKIKIYDFKRPDKFSKDQIRTLQMMHENFARVTTTSLSAQLRTLVGIHVASVDQLTYEEFIRSVSNPSTLAIVSMDPLKGSSILEIDPSITFTIIDRLFGGPGESPKNLNRELTDIELSVMEGIIVRILGNLREAWSQVIDLRPRLGSIETNPQFAQMVSPNDMVVLITLETKVADVEGMMNFCIPYITIEPILSKFSAQYWYASIRRGSTSENLKIIKEKLQNIFVETSAELGSMQLPLSDILNLQKGDVVKFTDTKITDPVIFKIGNRKKFLCRPGISGSRMAVQLTGVMDGEADITEDDLLKEED >gi|343385603|ref|AEM21093.1| flagellar motor switch protein, 508317..509399 [Brachyspira intermedia PWS/A] MMSDGALSQDEIEALLKGADEAFGGDTAPKASSNGGGNVDKQLFNEAAKMIAENQAFSLSSISTKTVSITNITTTVGDVNNLHQMLSGKMVEAKVGYTGSINGNVYYFMGENEALIVASLMMGQKEAALNDMVSQVLKEAFSQMVGVSDSALSSRFGGSFTNSPIETSILEDAFSINIPGPLAIVSGSLSIEGEVENAPYVFALELPLLQSLIGSASNNTAAPAAGGNTANAGTSANNSMAGLVDNQAFDSGPQLGVQHAEFNSLMPASDVQGTGNIGLLMDVTMNMTVELGRATMTIRDILGLGEGSIIELQKLAGEPVDLLVNGKLIAKGEVVVIDENFGVRVTDIINPMDRLTNKPR >gi|343385604|ref|AEM21094.1| flagellar motor switch protein, 509604..509858 [Brachyspira intermedia PWS/A] MDVTINVTVELGRARLSIKEILSLGEGSIIELQKLAGEPVDLLVNGKLIAKGEVVVIDECFGVRVTDIVDSVYNTVAADTEKNK >gi|343385605|ref|AEM21095.1| Metal-dependent amidase/aminoacylase/carboxypeptidase, 510212..511393 [Brachyspira intermedia PWS/A] MQDNIISENVLSAMKDFLIDLRRDLHAHPELGFQEFRTSEKISSILDSLNIKYKNKVAETGIIADIEGEDKNFTIAFRADMDALPMEDKKNCSYSSQNKGKCHSCGHDVHTTVLTGIAKYFSEIKPPCNIRLIYQPAEETTGGALPMIKEHALDNVNVIYGLHVRPEINVGQVSVTYGAMYASSNMFEIHIYGKSAHGAKSYNGTDAIVIAAHIITQLHSFTSAFTDGSMRLHIGTINGGSANNVVADNVNMEGIIRMLCDDDTRNKRLNMIENIINNTAKSFNADAKFVNIPSYPALINHDDAVNIVKNSAESFLGKENCLLEKANMTAEDFSYYVQRVKGAFFSLGVSNEKINAPIHNGLFDIDENAINIGVKMQVLNVYNTYKNKDKFIK >gi|343385606|ref|AEM21096.1| dihydrodipicolinate synthase, 511453..512340 [Brachyspira intermedia PWS/A] MNMSLFEGAGVALITPFTEDNQVNYEKLEELIEFQIANKTDAIIAAGTTAESATLTPEERMQVIKFCIERTKKRTIVIAGTGTNNTASAVEFSKKSYEYGADMVMAVTPYYNKGNESGLIDYYTKIANSVKCPVIMYSVPSRTGVKLSLNVIKTLSEIPNIQGIKEASGDISYVADIVNIAPKLDLYSGNDDMVTPMMALGAKGVISVTSNIIPKENHDMVMNFLNGNVNEAIKTQIKYIDFVRAMFIETNPAPIKEAMNIMGFNVGECRSPLGPLSDKNREHVKNIINKYGFKK >gi|343385607|ref|AEM21097.1| dihydrodipicolinate reductase, 512363..513058 [Brachyspira intermedia PWS/A] MKVLIHGTGVMSSILKEVIEKEGELEISGFADDFTNEKGDIIIDFSHFSRLPAMIDYSLKNNIPMVICTTGYDETMLAKIVEASTHVPIVLSSNTCIGINLMNEVVAKIAPQLRNFDIEIIETHHNRKVDSPSGTAKSLFNIINDALDNEMFLVSGRNGLHVRDKKEIGMHSIRGGSVVGEHSVIFYGDDEIIEIKHSSTSRRIFANGAIKAAKFLIGKKPGLYRMKEVLQ >gi|343385608|ref|AEM21098.1| tetrahydrodipicolinate succinylase, 513120..513824 [Brachyspira intermedia PWS/A] MDMLEKSEDIIAYIKNSKKKTPVKIYIKGNLSEIKTNAKVFSSGNFHFVVGDYEDIKDILEEYKDSIEDYYLENDRRNSGVPTLDYFNVNARIEPGAIIRDKVTIGNNAVIMMGAVINIGAEIGEGTMIDMGAVLGGRAIVGKNCHVGAGAVLAGVIEPPSAKPVIVEDNVVIGANAVIIEGVHIGKNAVIGAGAVVIEDVEENQVVAGNPAKVVKTKDEKTADKTKLVDDLRK >gi|343385609|ref|AEM21099.1| aminotransferase A, 514051..515184 [Brachyspira intermedia PWS/A] MELNKNIVQVPYSLIRELTEKAQKKENAIMLTIGEPDLLPPKELIEYGCEYAKTHTLGYTQSGGSEHIRTLVANHYNKYYNSDIKADNVTMHIGSMEGISSVFRTILNIDDEVIIPTPFFSPYEQAVNLSYGKCVFVDTRPDHLVIKPEAIEKVITNKTKAILFSNPGNPSGYMLKKEEMDELVKYFEKKDIFIIADEIYSAISFYPFTSFASYPSIKDKVIVLNGFSKSHSMTGWRIGYSITPEYVRKCLVNASFNNVGSMVTLSCAIAEYALEKYPIIESFRDIYKERAFFLAKELTDLGFDVIEPRGAFYLFVGYEKFSKEPSLDFAMRLLDETGVAVVPGIAFGSENYFRIALTQDIPLLKEAAKKIRQFVHK >gi|343385610|ref|AEM21100.1| zinc finger SIM domain protein, complement(515242..516993) [Brachyspira intermedia PWS/A] MTEKINNLKQYINENFLLTLTNKGIYNRSVKDIDNIINNSPEKIQIEEAEDKIKVTIDTGEKIEVILNDEDIKSSKCSCPSKDICKHIIMSLLYIEHLNTENKENESNNNTIENDTKTEEIKEENNIFDEVKNISYDEIKKSSTKRNFEYALDRFNDDIEADIEEKAMLEINIPEENVIIYFPKKDSIKKAVCSCKDSSLCAHKIIAILKYKQMYNSLEEIKEEDKEIDENILKFSKDYIENIFEKGLYSCSEKDFDIAEQLSIKLQVKNMPELAKMFRSIAESIDSMINKHASFNKLFAFAILSRLYNTIKNIEKAKQNNDNRTVKLLTGEMRSKYINRKSAELLGLGAYPWISSTGYLGASAYLYNLNTKKLSFFSYVIPTFYDNAKTSYDDVRSNYRKKIHFENNISIEEISKYKLKFINYKVNDEERISSSKFTSVILNDRMNYTLLKEIKDSKNNEELFAENYDDIKNIDFKYDYFNKNDRSKIIIAEFQIIENQEFDKIEQTLYFDIVNHYKEDDEERLTLNVKYTSIHSNGIKYIMNYKNSSVDKDRFIVLEKTKYYIRPISIINANAVINIFFDN >gi|343385611|ref|AEM21101.1| hypothetical protein, complement(517014..517679) [Brachyspira intermedia PWS/A] MEHKINPMAKKVLLVEGNDERDLCSLLISKKLGLQFIVGKYDKSFIEDNNTIHIIPINEVDNKKNINSFIKTSNYNNIEKLAIVVDAENNAKKRFNIFDDIIKCEYDQNQNIYYYDDKGLFLTTKTDDKTSGCLEDLIEKIILENDKDLYNNCIDSLFKCANNYIDQGNNEAHILKAKILAFISVRCKKRNTIGGLFQECGNYLESNILDELIIFLQTIFK >gi|343385612|ref|AEM21102.1| ATPase-like protein, complement(517684..518754) [Brachyspira intermedia PWS/A] MNDIQIPNISISNFKCFKEFSIDSFKRFNLIFGKNSVGKSNLLEALFLYSNMYRSDTVLSSSFLQRDIPLNNNLELIFHNFNYTNPINIKTSNKELNIYSIKSLTENALDGIYYQIQNNNGETIKLPLLINNNRQLDNSFAPINHSYTIDNDVNVRSVILGSSLFNFYFFNDYTSYEARVKNNTVSLFDKLQNFKMDKIIIDSLKVIIPNIESIRISSDKICEADIGLDRYLPINALGSGVYKIFNYIVSIPFITNGVLLIDEIDNGFHYSALHNLWLSIFKVCQKNNVQLFATTHSYECIKAFNDVYNEVKNEYNSNDDIQGVRIEADKKEMYKYQAVIYNNEELNNAMDNWEVR >gi|343385613|ref|AEM21103.1| preprotein translocase, complement(519159..520082) [Brachyspira intermedia PWS/A] MSEEIKKENNDLTKNKIPFVKIMPIAAVVSSILFIASIALFINKLTTNSFNMGIDFAGGVELKVQIDNPEVINIAEIRALYNNFGTETVNIQELEGADNVNAFLLRFRGSNEESDRAMQVLYDKYTQEKVRLIGSNIISGVVSADNLKLAFILIIVSWIIIMIYITIRFNYRYAFPAIITLIHNVVIVFGILLFLNKEFSVLVLSSMLTLIGYTINDIIVVFDRIRENADSKKPFKEIVNISLNNVVGRTIITSISTLLAALAIMIWGGFILYDFAFTFFCGVVIGTYASNFIASGLLILFMKTKKD >gi|343385614|ref|AEM21104.1| preprotein translocase subunit SecD, complement(520116..521627) [Brachyspira intermedia PWS/A] MSHNLRLAFIIIGLGVMAWFITPTVRWYFFTSDEKKEESNMSLDEMIAKGYTKEQIDNVQSLKRLRSESVNMGLDLQGGIRIVLQADFEEYANRLDRTVSSLTAEEKNDAMERLISRLRGRIDQFGVSEVGIRKQGEDRVVVELPGARDPDRIKSVVLSQGALTFNLVDEQATATLTTNDMLMGVFTNTAKVPEYGKQLYFYSEKDDFGRRVRGAPVIVNKEPSLEGSALINAQVGGGQFGEVTVEFELNAEGSTQFAEVTAQNKNRMLAIVLDDKVISAPNINDEIRGGRGVITGRFTLEEAQDLARILKEGALPLNVSIVEEEVVGQSIGADSVKAGATALLMAAVLVAIFMIAVYRVSGVLSTIAMLVNVVLIIAVLSPLRFTLTLPGIAGLILTIGMAVDANVIIFERIKDELKIKSSVADAIISGYDRAFATIFDSNITTIIVALILWIFGSGPVQGFAITLFFGILINLFTAVFITRYIYEELIRTKVVKKAGFFFI >gi|343385615|ref|AEM21105.1| putative preprotein translocase subunit, complement(521732..522103) [Brachyspira intermedia PWS/A] MFTATLYAQGAAQAQAGGSPLVSIGMMVVIFAIFYFLLIRPQKQQQKKLAQSIAELKKGDKVIVAGGIIAEYVSDKENGRVAIVKVGENTKMEIVKSSISAVVTEEMLNPPKKEEKKKRIKKP >gi|343385616|ref|AEM21106.1| hypothetical protein, 522467..522667 [Brachyspira intermedia PWS/A] MVNNHDKLSKQNIIILVIGLAIFAISFLFIAMVGQHPEGFMGFLAPFTMLIGIVTIVAGFLYKSNS >gi|343385617|ref|AEM21107.1| conserved hypothetical protein, complement(522677..522949) [Brachyspira intermedia PWS/A] MDKIFDSKKDKASIHNGVSQIIGVSNIEEACKIAKELQSEGIDCIELCGGFREEGARKIIEATENKIAVGFVVHLEEQNNIYQKLFGNEN >gi|343385618|ref|AEM21108.1| putative methyl-accepting chemotaxis protein C, complement(523515..525479) [Brachyspira intermedia PWS/A] MQNKKSIGLQFKIFILLTVSILIMFVAVIAYMVTHNISTSKRKGYASTEYMITTYAKDIELEMLTYISTLRTLSSSLRNDIENGTVTRESHAIILGDTLKNNKNLFSIYEMWEKNAFDGRDNEFIDTDYGSEVDGRYGPSYFYDDNVVTYDKVYQDEFDENPDYYTTPKNTKQLYISDVEKDDTYADAGTVLTVSVVEPILDNSGKFLGMIGVDFSADNLVSIVSDISTNNGMVGYLINQNGTILAATNTQNIGKQISDIYKDHSKEITDNINNNNKYSFVNKIDDQKTFNILIPLDSLKDNNNSLALLVNIPEIVIVKENIKNAVVTCILAVIIIIVFLIIINILIKKSIIDPILKVMHISEKLSSGNLTPDENNSLSKRKDEIGMIFNSIQNTQNKLSNIIKEILDTTNTMENASKNVSAGTIDLSNRTEKQRDDLKLINETMTNTLKVIDKTTNDIALTNDKIQVLTNSSEHCYNLSKESMVIMEDITKATSEISNITKMIDDIAMQTNILALNASVEAARAGEQGKGFAVVASEVRNLAQTSQESVKNITNIVNTSIEKIQDGNKKIKETMDALEDITNKARESSHIVSQMVESSTQQDASAREVQSAVNSVDISAEQNSNLVKTNADIVIDMEKETEKLADLMKFFSLN >gi|343385619|ref|AEM21109.1| UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, complement(525598..526413) [Brachyspira intermedia PWS/A] MIHNNPKEAFIKLLYFLFEDKKYPLGTIESTAVIKENVNISDNTYIGDNVHIGKNTIIGKGSVIEANVFLGDNVVIGENCTIYANVTIHDRCVVKDRVIIGSSTVIGNDGFGFFEVNGKQMKIPQRGNVVIENDVELGANVCIDRATLGSTVIREGVKIDNLVQIAHNCDIGEHSIIVSQVGIAGSSKIGNHCILGGQAALADHVTVGDRVIFGGRSAVMSNVKIPSHSIMLGAPAQNIEREKLRMIAEQKLPELINLVEERFEVKIKRVK >gi|343385620|ref|AEM21110.1| outer membrane chaperone Skp (OmpH), complement(526730..527158) [Brachyspira intermedia PWS/A] MKKYYIMSLLFIAVLAISIVSPRVFTQSYRLTKVGYIDLERVIKELTSDEEFVEKLKLKLEEYKERDAMQTNMEDTSIAQNRDYSLRGEVKRQVASSLMAIVKKEGYTLILERTEHAILYADRNFDITEAVIANVKASLQKQ >gi|343385621|ref|AEM21111.1| outer membrane protein, complement(527203..529791) [Brachyspira intermedia PWS/A] MLTAALLISAESDFENLRTARNIAVYEGLTINRIDVTGEVRLTKDQIINNFPIKAGSKFQRTQINEAIKKLFDTQLFDRVAIDANREDDGVVLNIVVAERFIIKDIEYIGNKRLSRTALNDAVKPIMKAGDPYIPQKLNDAVNAIITNYQDKGYLKAYVEPKVIENKDTSDVLIQMNIVEGNEVKVAHIRFHGNTHFTDNELKRQMSTKENGFMTLGKFNEFTFDGDKDKIVKYYADRGYYRAKVDNVKFTYQWRNPEIKNEQDLIIDVYLTEGDKYYFGDIGFKGNFIIPSDNIQKDIKAKKGALYNYSYHMADYQGIQNKYSERGYIFRQVIPVINVNEENKIVNIMYDIVENDKVHIENITISGNTKTKDFVIERYVDIKPGEVFNTTKIQRVQERLYNTQYFDNINLGVKPGSAEGLMELNLNVSEGKTAMVSGGGGFSTGSGFKVFASIRENNFLGRGLTLGLSGEFGEQQKRIAVNFAEPYLLNLPIYLGVDLSYFNEGVNTGYEIGTDQFGIPKYSYYTRHGFEGIVRLGYYFADYYSTFITFDTIVQQYQQWHDQGASAAGPNYVLSDVKKYLTHRVNKKDGSFERWESDWFTTFIVSYSLLRDSRNDYLNPTKGSFLRGMVDFYFGHTQLTRLSATGFLAVPATEWLSFAFYGELGQIIATPGLPLQNDADVLYYLNPFEDVRGWDTSKYTIFKKNRGLSTYDMAGNPDADGNPTTDSWSYGRAKVRFFAELRVPIIPKTLGFVTFFDAGQLWMPGSTGWNQDGDAHSYPSQFMDIKDMFDPSQYIYSVGFGFRLTIPIFNIRFYVAKRFVYNKEDVGFGKGFQDFEGDTFTPLGAWLGRGWGIAFTMNHPFY >gi|343385622|ref|AEM21112.1| hypothetical protein, complement(529836..534221) [Brachyspira intermedia PWS/A] MIPALFSVSLVVSNKQKYLDNVIEYINKVSPINIYISDISISYKLELVLDNVKLYSKNNPKAFFEMDRASLGFNIFRIFIKKDPLYLLSDVNINNADFYPNLLDTSIFKSNDTNKNSYTDSRDIINNITSIFQEKNINIKNFSAKIVDNNNTTEVSITDLNGNFRDYGYFLSYDLNLPDNTIVNFNMESSTNLSNIKSEISGRDDRNDLFKYDLFITNTFYDIFIGLQNKSKYDFINFTYNYNKEDIVFSVTNIKLTKDTVHKFMSIALDTPIVSKFVKLDNKTISTVSNYINTFRDAEINSSGYYSFRERKKSHIDFDLNVRDKLFNVAVDAKLTNNKIILSNAYASVLEGNIIASGIVDLDNPISSTVSLNVNNVKAGANYLSTKVYLKPVVNADNDEIKSRFTIASLSYANSMPNPMTFEFLYKKPEKEISIRLIPNEYYQPLYASYSLDNTNPVIASAKGVIPQEIFVVLLGQNIIDNLSSLNVEYTMSNAMYTGGKGNVHVLQASSRKIYTEEYLIRIGASVYKNIIDINDIYYRLSEDGGINANAKIEYDKNFNVKINGNVNTPAGNYGLNGFSTTSTNGSKIIYASTDNSEIIASGIIATNGILDLNIKTPKTLSIKDIDINVDVDINNYMQKPLYLYGNVKANKNLAPIFALNTQFELSNQSIMFTNIILTYGENRITGDGILSSTDGITKFAALLKDLENNGIFALDTSINKNNIYGKITVNQLPFDVSGQAYGVLTANATIIGLMNNPVIYLEKFDIKDFQIPGMQFDISLNGYYRANELEIKDVLITKTGDFGMLTAKPFAKKQQIKIPYAYFSKELQNMTVEVNNMIFMSSFSGNINYNMRKLPDGREEYRLQTGPITVNKRKLPEFGTTVIRDKNDILLTNTKNHGIKGAIVGEEGNTRTDLVYMYNNDDMLNINGVIKNTKRDQVDLLVTSDIINVEVFEIFNVLFTEIASSPTNFTVDGKPYTLYAHIHGDADNVAIDGRFLGHGKKVKIAYFNDIFDDTIVDFNFDGHMFNVNNLTFTSRNKKNLTVTGEAELFKNNINYMAFDLLSSDEQLGLLDGNLNLGIAKVKGPVHVDLTVNGNMEAPRIGGILTLMKSDVQLSTLPSGSTYRERVYGILSKIYWDFTIEAWRQVRVAHNLVGDVYLEEGSKMRVYNTLLDGIELAGTINVERGSIYYLQNVYQLERGSVTFPPANSLDPIIDATAYTYKKYYPSTGNTSSQSYENELSGESVTLYMEMNARLSQLLSSEDSALRPVKFYTIPALGQYQVNQLAGIPQGTFGSREDQMFADSTANRSSINSDQLQQLTMNYSDLLLRSTVLRPVERWFRQFLGIDYINLSPTVVNNLIFVTNSSSINPTSVWDNTSVGIGKYVSKYLYLKYDVTYRVNDTTRPSLNGRNVDPYYFDHQFGFEVSLLKNYKLANFVFEYKINPFDIRGKGQDFNIVTRWRF >gi|343385623|ref|AEM21113.1| putative PTS IIA-like nitrogen-regulatory protein PtsN, 534518..534952 [Brachyspira intermedia PWS/A] MLKELIRNKIDIVDSVDNWEEAIKKGAELLIENKCIEPRYVDNIIKNIKESGPYIVLGDGMAMSHARPEDGVIKNGITLLKIKNGVDFDEKNKIFLLFTLAAENNDNHQELMEEIADLLNESEKIKRIMYDELTDLEIYDIILQ >gi|343385624|ref|AEM21114.1| putative PTS IIA-like nitrogen-regulatory protein PtsN, 535103..535489 [Brachyspira intermedia PWS/A] MLKEFLKDNIKIVENVSNWEEAIKIAAKSLIDKNNIEDIYVQAIIDDVYKYGPYIVLTDGAAMPHSRPENGVLKMGMSFLKVKNGVDFYKTDEKVYLFFVLAAENSDSHQEAISELADFLGNDDKVKK >gi|343385625|ref|AEM21115.1| PTS system ascorbate-specific transporter subunit IIC, 535801..536274 [Brachyspira intermedia PWS/A] MEVLLKIWTYFVQNILTQPAYFIGFIVLIGYILLKKTWYECLAGFLKATVGYLILLVGSGGLVNNFRPILVGLKDRFDLQATVIDPYYGQNAVQTAMEHMGKSFSQVMMLILIAFMFNVILVAFRKVTKIRSLFTTGNVQIQQAAAAFWIIFFVFLN >gi|343385626|ref|AEM21116.1| PTS system ascorbate-specific transporter subunit IIC, 536244..537266 [Brachyspira intermedia PWS/A] MDNIFCFPELGDIPMLIIMSIILGLYWAVGSNLTVEITQDLTNGGGFCIAHQQMFALKIFSIIAEKLKGKGESKKLEDIKFPGFLSIFNDNMVSTSILMLVFFGIILLILGKDYLIDNEFMKEGQSFFFYTLTTALNFAVYLSILQLGVTTFVAELTQSFKGISTRFLHGAVPGIDCTAAFGFGPPNAITIGLLFGAAGQFLAIIILILMKSPILIIAGFIPVFFDNATIAIFANNKGGIKAAMIFTFISGICQVFGSAFIAYWIGLATYGGYVGMLDWAVLWPGFTIIMKYLGYAGVAIIVLILIAIPQIQYMKNKDTYFLIIDDYDAYKEKLKEKSKF >gi|343385627|ref|AEM21117.1| putative hydrolase, 537454..538257 [Brachyspira intermedia PWS/A] MNNIELIATDLDGTLLNNNHQISEYNKKVIKRASEKGIKTILSTGRPTASAYKFLYDLNIDTELISFNGAMITDKNSNIIYQENLNPEISIKLINIAEKYNVYHQGFLGDRWNIGFFDKKWTNFYTSIAKIDNYIIGFGDIEDFSFSKFMFIGENDILKNIAEELNCTFGSSIYHTFSRDVYLEVHSPNTSKAKALKYLADKYNINSDNIIAFGDNNNDLEMLEFAGISVAVENAEDTVKSKSLYITKSNEENGVGIFINNILNLNI >gi|343385628|ref|AEM21118.1| hypothetical protein, 538340..539380 [Brachyspira intermedia PWS/A] MQIFQEKLLKALEMYQNDFDNIIGSFFDDKDKYNNLISKYSCEMEDDVDKNYLLRARLSFSIIYYKNLQALNKEALKNIIIHLFNEELKDREHSKYKGIGIALESLTFLLSKYNKDNKDLFEKAKKINTDCAIGYDSNVRFESDIEKLTIQYCMHYALELGFKDLYYELIDVWKSSIEKWDRINLERLRDFEIEIGNRDGELEANKKLYEIVKSDYDKNKQNQALSKKYLFYLVSYLSNYAENLIRLSNYDEALNIILLNIDDIKSINNNAFYKVHAGISIADSALKILINKEINDNINLLWDFIKIAFTNEHNTYSKSLYESFFKACDKMNDLELKEKVEKEMKN >gi|343385629|ref|AEM21119.1| putative phosphoribosyltransferace, complement(539377..540108) [Brachyspira intermedia PWS/A] MKLYKHIINNILSLIFPNHCIICGELMQSNNMNYVCIDCINKNLDYIHKDEYIRCPKCGKVLESEKSICICKDEELYFDECKSMLYYNNHTIDLIHKMKFSHRYLICKDFAAMLSYYYKDYIKNYDAVTFVPLGKNRFLERGYNQSEIIAETISKILNIKLIDDIIFRQKETKALSSLNSKTERLNMIKNAFVINTDYSDHNKIDLLIIDDVLTTGSTLNEISKEIKKLECINKIGLLTVARA >gi|343385630|ref|AEM21120.1| band 7 protein, complement(540120..540911) [Brachyspira intermedia PWS/A] MRIINVSSNKLHSLLFILLPVVLVVGFLIFSSVTIVSTGEVGIRSRLGKAISQEEPGLHFRIPFIDTIKTMEVREQTVEKTYAVSSKDMQTISMTLNVQYSITGDALDLFRKFGTDYKNKLVNPRISESLNAVSARYTIEEFITKRNEMAGELLKEVMSDFQDYGITVAACSIIEHDFSDEFDQAIERKLIASQNALTAQNDLEKVKYEAEAEITKAKGIAEANRIMQESLTPLLIQRMYIEKWDGKMPQVAGSGVSPMIQIK >gi|343385631|ref|AEM21121.1| Lysophospholipase, 541157..542089 [Brachyspira intermedia PWS/A] MEMLNRVLISDDGHRMYTYIFKPDSKPKAIVQIVHGLGEHAGRYKEIAEKLNKEGFLVCADDHRGFGRSTVSKDQIGHMADKNGHELIIEDMKHLMVNTKADYPNLPYFMMGHSMGSFLTRGFLIKYHKDLNGAIIMGTRGKPKGIENLGKTIANIQKSLFGGRKRAYLLDKLSVGGYGKKFFPKDNSDLAWLTSDKEEIKKAQEDEYFANKPASIETYIQLFELIDKISNKDNYSSMDKNFPILLISGAKDPVGDMGKGVKWVHEMYESLGFKDVTISLYENGRHEILNDVQRDDVAKEIIAWLNAHIA >gi|343385632|ref|AEM21122.1| putative nudix hydrolase, complement(542422..542910) [Brachyspira intermedia PWS/A] MAFSDNERMIFGKGVGCVVIKDGKVLLGRHNYGRGKGLLIIPGGFINEGELPAEAAEREVLEETNVKVKTKEIVSMRFTENDWYLMFRAEYISGEAKVNDSENSEVIWLDVEEALNKKDVPPLSKEAIKSCLKFINSENKYAMSIKEDYDASRELGSYAYYD >gi|343385633|ref|AEM21123.1| putative Cell cycle protein MesJ, complement(542932..544296) [Brachyspira intermedia PWS/A] MLKETYNFLLSNIYDIKNKTLAVAYSGGIDSQVLLNIAYRLKDELSFNLIIIHVNYNLRGEDSTNDELFARDMAKKYNIEIYVKEIKPNSYNGKNIQLEARNDRYNFFEELHNKKIYDYLLIAHNKDDLAETIIYRMIKGSGTNVYKSLRDKKSYILRPILNFYRKDIEEYAKNNNLEHREDVSNKKNYYSRNKIRNLIIPMLEEINTNAKNNIIRFAKRSYEETYILRKKVNKLYKKNISEKNTKLNIEKIKNTNELFIKKIVIKFLAKNNIEITEKRVSEILKLIKSDKPNIRLRLDNFYLIKEYNFIKTIEKQNEKKLDDIKTNNFIKIEKDGVYNFLNKKIEVKTVLNKDINYKDNIYIKADYPLIIRNKKESDFINAYPNGNKKYLRKIFIDLKIPLYERELIPIITSVNDDILALYLEPYGLNRISKNAAVNKDDEYILEIHFYNDKN >gi|343385634|ref|AEM21124.1| hypothetical protein, complement(544306..545220) [Brachyspira intermedia PWS/A] MIISASRRTDIPSLHTKWFLNRLKEEYVITQNPISKNNFYKIPLNKNIVDIIVFWSKNPNIDFLKEVKDLRYEFYLHFTITPYDKNIEKNIPDKKLLIKNFQTISKLFGKEKIIWRYDPIILNDDFDANYHINNFKNFADNLNGYTDECIFSFVQIYSKIKNNIKNINDNDKLILIKNIKEISEKNNIKLKSCSQDFDNITNIRIEKSACIDKERIQKILGYSIKEKKDKSQRKLCNCIESIDIGMYNTCTNGCIYCYANSKNILKDYDANNEILSDKNLIDNENASVTERKIIINEKNAVFKL >gi|343385635|ref|AEM21125.1| beta-lactamase domain protein, complement(545235..546044) [Brachyspira intermedia PWS/A] MEIKIEGIPFSIFLPKIAAYIEKDDKTRKIIKYNTMSGMLDTMDIFLTDTEKNNLLKTGEIIMSELQIYCINNNMYGMNSYVVIADDEAMIIDAAQLNNYNVYKKVLEGKKLVRVIYTHGHFDHISGADDIRKEFPDVPHCVHSMDYDFFQDGSLNVSSYLGSVIKCQSPEIQFNDGDTFKLKDIEFKVIHTPGHTRGGVCFYTKGHLFCGDTIFAYGIGRTDFPTGDFATLENSISQKVFALDDDTLLYPGHDAFGVKLSQRKKMGVF >gi|343385636|ref|AEM21126.1| hypothetical protein, complement(546029..546355) [Brachyspira intermedia PWS/A] MYSKIDLVNMRTVYNKTIDYYDFGTMEHTFDIRGKVKYTNAQGSLAIFSMYGAYQIARTFPLEATNEMNIIMPMTSKDNKIRVSILNNGIKKIKYKMKKKNAMKWKLK >gi|343385637|ref|AEM21127.1| hypothetical protein, complement(546679..547062) [Brachyspira intermedia PWS/A] MDILSSNNLPQKARNFIETYFSNYYLFKVTFNSSYSAVFKGGSSINFNTKGEWTSIIGNGNEIPFNIVEKLAEDNLIEKEIIKTIKDKYTSFNIYRIIKRKNKYEIEINNNIIIIDIEGNILKIKNV >gi|343385638|ref|AEM21128.1| hypothetical protein, complement(547094..547237) [Brachyspira intermedia PWS/A] MKTKEELVEFLNKKINNNQNLADVHNYIFLKAYLEDMIEKEKNEENK >gi|343385639|ref|AEM21129.1| hypothetical protein, complement(547544..548221) [Brachyspira intermedia PWS/A] MTKYNIKFYFLISILYIVSSSFIFFDDERNIQFVPYTSLPNNIQEFVNTYFNEYEVYSAAVSTHYMVIFKGGSSINFNRKGEWTSIIGNRKIIQISTAEKFIDSKIMNIIKNKYTSINNIYKRSKGYEFKVDDAYYIYIDHNGNILKTKKPKNNTIIFYKNIRFLKNKFMFYFYIWGFATAVRAYGNPTSFATGGSSVSIATKKQSQPTSRSVHTAGECLYFILN >gi|343385640|ref|AEM21130.1| MATE efflux family protein, 548392..549738 [Brachyspira intermedia PWS/A] MMNIQKMDKSFFKYVLPAIVSTMLGGFYIVVDGFFVGNSMGDIGLTAINLVYPIGTLLMAVAIMLGMGGSVIMSTYLGEGNIEGFNKAKVNTFISLILASIILTVVLLLLKNSLIYLLGARDEVFKQADSYITTIILGGSFQIISFGSMPIIRNSGKTIHAMSFMGVGLITNIILDYLFLMVFRLEMFGAALATIIAQGLVALIAVYYLFIRKKNRTKIKLSDFDLSMTKRALQIGLSPFGLVMAPSLIVIFNNLQCIKYGGYLGTTAYSVMNYIYGSILHLFEGVAEGCQPMISYFKGACRNDLMRKVFKKGILFDIILGAFLIIIVLVFRNKLGILFGASIETNAIISLGLPIISSGFILQPIVRLGTAYFYSSGESRYSTLLTYIDPLFVSPLCILILPLFLKLNGVWFAVPASQLILAIVFLFIFYNTNLKNDNLVSKAVYQNE >gi|343385641|ref|AEM21131.1| cobalamin biosynthesis protein B, complement(550206..551183) [Brachyspira intermedia PWS/A] MKILLILPISFLLNIFIKNIKFDPFVFVSRLHFIAEDLFRKKVKNDNKILAYILGILSSLILIAIGFLVPFFLLMFLYKVHFILGLIIELALCYITLGIRKPLEISSYIYHSMITNDIKKAKSLLKENAEVDTDDIEDEQIIKNTIEYTIISIAEDYIYPAIFLLLGGAPLCIAYKVIYVLSESSSDTIYLDENKSDDVFGILNIKLCYILNIIPSFFTALICIITSIFFKYEYKNAFAVLKKDGKNNKARLESGIAGAMNIELGGEYIKDGEIYDRPLIGEYLEDLNPNHIEKANKLILTSAIFALAALIIIKLISMLISSIIF >gi|343385642|ref|AEM21132.1| Fructose-2,6-bisphosphatase, complement(551228..551812) [Brachyspira intermedia PWS/A] MKILFIRHGQTQLNAEGRWLGSTDAPLSESGKEVLINKKNIVEKYKPVQKLYCSPMKRCLETADIYFNDMNKEVIDNLKERCFGDFEGKNHDELKNNPYYKEFFRTNWKSNVPNGETAEHFFGRTENAYLYIIENMKKNNLDYTAVVTHGGVIMSIFSRYDKQKLNFYDYLLQNGCGYYAEIDDKNNINIIEKL >gi|343385643|ref|AEM21133.1| membrane-bound proton-translocating pyrophosphatase, 552161..554464 [Brachyspira intermedia PWS/A] MRKQDEGNDTMKEIASHVRSGAIAYLKQQYKVIAFFFAGAFIIFAILSYALKVQNPFIPIGFLTGGFFSTLSGFLGMKTATYASARTANAASKSLNEGLTIAFRSGAVMGLTVVGLALFDISLWFIVLNVWLDNSLFGTDFLNLAATGITKGTAEYTAAKMHFVTTTMLSFGVGASFQALFARVGGGIFTKAADVGADLVGKVEAGIPEDDPRNPAVIADNVGDNVGDVAGMGADLYESYAGSILAAMSLGSAAFGYINPDVSPIFAVSLPMILAAIGTLSSIIGVFFVKTKEGATMGELLKSLRVGVYVSSAIIIIVAFLLVKALLPNNLGLFVSIIVGLIAGNVVGFFTEYYTAAEYRPTQWVAEQSKTGPATVIIGGLAVGMQSTLIPVVTVVISIILAFGFAGGFGAEASSFSQGLYGIALASVGMLSTLGITLATDAYGPIADNAGGNAEMSGLPESVRERTDALDSLGNTTAATGKGFAICSAALTAMALIAAYIEEIKTSLGRMINTGNLTSIDIGTVQYTANSAKELYDKVVYSLGMNEFMNAFNIHLMNPKVLIGIFIGAMLVFFFCALTMKAVGRAAAGVVEEVRRQFREIKGLLAGDKGVKADYEKAVQICTKSAQKEMIVPSVLAIIVPVVVGFLFGVPAVIGMLVGGLTAGFAMAVMMSNAGGAWDNAKKYIEAGNLGGKKIIDPKTGEKITNPNHAAAVIGDTVGDPFKDTSGPSINILIKLMSLISVVFAGAIVAFSPKIQAILGIADQIIK >gi|343385644|ref|AEM21134.1| putative methyl-accepting chemotaxis protein A, 554790..556622 [Brachyspira intermedia PWS/A] MKKIHSIRVQMPIAISILSTFFLVLIVAILSYRSHAIVKDSTLSGFDNTVNGYKDMLDVWLDDSRNLIKTYAVSPIVRNYLMDRTIDIRSTLTEFEAINEYVLDIGITDTNGIILDNVNNVKIGENITTVRPNILNILKRNNNEASFDDSIQKSSADKKWSLAVICGVKYNGEYVGNVYMIMDWEDLAAKLQELKLPERTRIFAIDDNNIVVLDTKNEINTEANEAYTSIIKGGMPSGVMNYISSVSNDPRTAVYSRLMNLDWYLIMAMDDKVIYKANNDSIMISIIICILSIVFINIFAFLYIKKVTHPLKVLMDHATSISEGNITTHIKDNYGKDEFGQLEKVFDVMSNKLAEVVSSVNDASREIMTAAQSMMESSNELSVRTDSQSSSLEETAASIEEMVSNIKTSAEKSLLGKNMMSESMQYIEDAANIIAQTASNIEDVYQASEKIKDITKIIEDIAFQTNILALNASVEAARAGDQGKGFAVVASEVRNLAQTTQASVKDITELVDNTSQKIDTATRTAKQSQEIFVDLQNKVSDTSKLMETITSNALEQESGTNQISVEVNNMESATTQNAALAENSNEISKSLVEKAEFLERSIEFFKISHS >gi|343385645|ref|AEM21135.1| hypothetical protein, 556844..557596 [Brachyspira intermedia PWS/A] MKYFLFVNILIITITYSAFASLEINFQGHYGIAFPFNSIKVNDNYKNTIYDSVKGSLGFEGAVFFQIGNYFKLFEDDYTSIIKGVSLFGDIGFSINALMSDYKENNRKYTEILGFYSMMVGATVKLNFSKMSIGFGTGIIAPLYAMESSSKYGGVIASPNLDNWNVNDMRNLFKAPIMPYIKLTVEGFLYLVPNFAVTVGGYIMYNFGMQYKTDVVNNNLGGNIYNQYNFSDLSIGLILGISFGRSDGYN >gi|343385646|ref|AEM21136.1| DeoR family transcriptional regulator, 557666..558598 [Brachyspira intermedia PWS/A] MNIFDDLSLLYTIAKYYYLEDYSQSDIAKILNISRPQISRLLKRARELEIVKIEISMPNNLQDENKSEKIKKYLGLKDVLIVENSNDNKLLYVKSSEYLLPLIEKSKKIGIGWNETLYNISIELKYNDSDKQKVFYPLIGNLGNNNNPYLQITTIVDRFAEKFNSKAYFNNYPALIEKKSLNNNDLEKLEEFKKFWSDLDVAIVGLSSRRESYQSYISDIPKVDKLNVDEIEGIILGSFFMNNGETFNYPDKYYVNSIMLSELKKIKDIVCIVSGVKKIDTIKFAAMNKYFNILITDESTADSIISNFNL >gi|343385647|ref|AEM21137.1| sulfatase, 559016..561376 [Brachyspira intermedia PWS/A] MYNIRNIVQNICSIVYDISFGGLLIFMNKDNIFSKSLLFAGALSSSMISVSCNNDNRASDNSMVLASNDIEKPNIVYIVIDDMGFSDLGCYGSEISTPNIDRLAENGLRYNNFCVTPLSSPTRAALLSGRNSHSVGMGRLANYTLDAPHSTAQITNTAALTPRLLKDNNYNTYAVGKWHVAPLWETSSIGPYNNWPLGRGFDKFYGFMDGETDQFNPELVDGNTHVDTVYDDNYHLTEDITDRAIYYIKSHKSISKEKPFMLYYATGAAHSPHQVPEEYVKKYENVYNVGWDKIREERLKKQKELGIVPMDAELSPLNENVKPWNELDEDTKRLFIEYEKHYAAFIEHTDAQIGRLIKALEDMGELDNTLIFLIADNGPSPSGKATGTLNTVNIKNGIMSDIEKDVKRINEFSKLAPNYPQGWAQVSATPFRYYKESANYLGGIRVPLIIHYPKGIDKSQNGSIRTQFSFVTDIAKTVLDITGIKEPKTVDGIEQMPLHGYSLVPTFNDANADTKRTTQYFELYGNRGLYDNGYFLSVSHKKGDSFDNDNFALYDLNTDFSQLEDISKENESKLKDMKNLWDKEAEKYGVNPLDDRVHVELIAKQLSANIEKKNSLTLYPNTSSINVNISAIPTALNRSYDITAYVNRKSSAEEGVLLAFGNHYGGYSLYIINNKLNYEYIYDDVKYHIEVNEPLPLGELIIKVKYTKTGKDSGEAALLVNDKEVGKLALPKVYPMTANTTDGMSAGRDLQGNVSERYEGRGHFEYSGDLEKVTVEGHNDYNKIAM >gi|343385648|ref|AEM21138.1| sulfatase, 561811..564189 [Brachyspira intermedia PWS/A] MRKNNNNFKKGFCIGSSVLMAASAVSCSTENKNQSEKPNIVYIVLDDMGFGDLGCYGSSISTPNIDALAQNGIRYVNYFTSPLSSPSRASLLTGCEANKVGMGAVSQVDFGDLAPNMAGRIKPEHAPITHTLKANGYNTYAIGKWHLGPYDEFTPDGDKYHWPSGKGFDKNYNFIAGQANQFQPGGIIEGDEFIVPDTSDPDYHLSKDIVDRTLKYIDESKNEPFFAYVAFGAMHGPFNVAKKYIDKYKGKFDHGWDVEREKIFERQKELGIMPADAVLSERNDEVPAWDSLTDKEKAVAARHMETYAGFLEHTDEQIGRLISEMKKRGVYDNTIFIVVSDNGANYNGGRNGSIMNHANENLYVHDLDTQYSLLDEFGSALYGTEYNKGWANVSNTPLRYFKTKTHYGGVKTFCIASWANGIADKGRISKDMIAVFDITPTMLDIIGAEPLTEVNGVKQEKMQGMSFKESFESSNPMSNPRKEIALLMMLDRTYADGSGYIIVTNPKTQEWELYDINNDPTQINNLASSMPDKVKEMALKYETVRREFHDSENLLMDIVHKTNPETLTKRYGQLASDVLTSLKTGKAVSKDAEEYLRLYKFFSYVPEGAGYTGVGSVWYYPSTSKFRATNYTYKKEDGYFFSLSAARTGPVSHKINVDIEVPNNAKGVIYANGGLDGGYALYINDNGNLVYEYNYLGERQKVISPEVMKEGKYNIVMDYKKDKVNSGIIDMIIDGNAVASSPVKMLPIMISYDYFSIGEDVGSKVSLDYKDDYVFNGKVDEVNIVLGDDLLK >gi|343385649|ref|AEM21139.1| sulfatase, 564227..566593 [Brachyspira intermedia PWS/A] MTNKFKKGFCFGTSLMVAASAVSCSTETQSEKPNIVYIVLDDMGFGDLGCYGSSISTPNIDALANNGIRYVNYFTSPLSSPSRASLLTGCEANKVGMGVVSDVDFGELAPNITGRIKKEHAPFTHTLQANGYNTYAIGKWHLGPYDEFTPDGDKYHWPSGKGFDKNYNFVASQANQNQPGGMIENDNYIIADTSDPNYHLSQDIVDKTLEYIDESKNEPFFAYVAFGAMHGPFNVAKKYIDKYKGKFDHGWDVEREKIFARQKELGIMPADAILSERNEDVPAWDSLTEKEKAVAIRHMETYAGFLEHTDEQIGRLISEMKKRGVYDNTIFIVVSDNGANYNGGRTGSLMAHANENLYVHDIDTQYDLIDEFGSAVYGTEYNSGWANVSNTPLRYFKTKAHYGGVKTFCIASWSNGIADKGRISKEMIAVFDISPTMLDVLGFEPLTEVNGVKQEKMQGISFKESFESSNPMTNPRKEIALMMMLDRTYADGSGYIIVTNPKTQEWELYDINNDPTQMKNLASSMPDKVKEMASKYEETVKRDFNGAQNLLIDFAHRVDSKILIERYGQLAKDVLTSMQTGKAVSKDAEEYMRLYRFFSFVPKGIGYAGVGSVWYRPPSSKLRATNYIYKKEDGYFFSLSAAHTGSVSHKINVDVEVPNKASGVIYANGGLDGGYVLYVNDDGNLVYEYNHLGERQKVISPTKLESGNHNIVMDYKKDDVNSGVIDMIIDGNVVATSDINTLPIMISYDYFSIGEDVGSKVSLYYKDNYAFNGNVEEVHINLGDDLLK >gi|343385650|ref|AEM21140.1| arylsulfatase activating protein AslB, 566757..567989 [Brachyspira intermedia PWS/A] MNKGYHLMAKPFGPICNIKCEYCFYLEKKSLFQNTEKYKMSYDVLENYIKKYIETQDIPEISFVWQGGEPTLASLDFYKDVVKLQKKYAGNKNITNSLQTNGLLIDDDWCKFLKENNFLVGLSLDGNKDIHNKYRKDIFGNGTFDRVFNSLKLLQDYNIDFNVLASVSRYSSKYPLEIYNFFKENKIKYIQFSPIVERLPDEEAKKLSLTHSIPNSNSNEKVTDYSVEPESYGDFLISIFDEWVKKDVGEIFVMNFEWALTSWLGLDSTICLFGKECSGCTVVEHNGDIYSCDHYVYPDYKIGNIINDNPRSIIDSDKQKTFGLKKSNLPKNCLRCDALFACRGECPKNRFDKFYDGEEGKNYLCEGYKKYFYHIHPYMKAIRELLENNIDIREIMRIKESPIVVVKKNN >gi|343385651|ref|AEM21141.1| nylC-like family protein, 568384..569373 [Brachyspira intermedia PWS/A] MKEIKITDIENIKIGNAENKEAATGCTVIICERGAVIGLDVRGGGPASRESELTKAQASTDIVHAVLLSGGSAFGLDASGGVMKYLEERNIGFDVGITKVPLVCQSCIFDLRIGDYKVRPDINMGYEACVNAQNNNPKMGNYGAGTGATVGKILGADYAMKSGLGFYAVQVDDVKIGAVVSVNAFGDVYDYDSGKMIAGVLNENKNGFRSSEEELIKITQNNNLSFTSNASNAKENTTIGAIITNAKFTKSQMGKIASMAHNGFARAIKPVHTTLDGDSIYAMSVGDVNANLDAVGTIAAIVMGKAINNAVRNAETSHGFKCHNDIMKN >gi|343385652|ref|AEM21142.1| putative Short-chain alcohol dehydrogenase, complement(569535..570254) [Brachyspira intermedia PWS/A] MKKLVVITGASSGIGMETAKKFSENGYPTLLISRRKEIMEKLNLKNSISVSADVTNLEEIKNAVKIAEEKYGKTDLLINCAGVMLLGNIDKQSYEEWKNMIDVNVNGILTTTNVILPDMIKRNEGTIINISSIAGRKTFTNHGIYCGSKFAVHAITESIREEVADKNVRIIVIAPGVVETNLLSHTTDENIKSDYIEWKKSIGNGLNASDVVNCIEFAYNMPQDICVREIVIAKTKQVD >gi|343385653|ref|AEM21143.1| transcriptional regulator, 570392..570748 [Brachyspira intermedia PWS/A] MKKIKVSSEIGVTLYMIGGKYKPIILNYLIENKTKRFNDMMRYMKPISQRTLTNQLRELEEDGLISRKIYAEVPPKVEYSITKKGKSLYKILEAMCEWGEKNIDEGFEITNPQCLEDD >gi|343385654|ref|AEM21144.1| ATP-dependent metalloprotease FtsH, complement(570960..573071) [Brachyspira intermedia PWS/A] MSSKKNNRRQSMPQSGGGGNQIIIILLLTMVVVMAIMYFQKTPQVKAQEWDYSTVVQKVKEGVVKEVTIVDQNIRNGKAIETVNGKITEINFYSFIPFTASGFVNLLIDNNVKVRGEAEKPSYLSLILVNLLPILLIGFLLWFFMFRQVQGSNNRAMSFGKSRARLLTKEDVKVTFKDVEGCKEAKEELQEVVQFLKDASKFTKLGAKIPKGVLLVGPPGTGKTLLAKAVAGEANVPFFSMSGSEFVEMFVGVGASRVRDLFEQGKRSAPCIIFIDELDAVGRTRGAGYGGGHDEREQTLNQMLVEMDGFNTDTRIIIFAATNRPDVLDPALLRPGRFDRQVVVDLPDVKGREGIFKVHVAKIQHDPSIDLYHLARATPGFSGADIANMVNEAALIAARNDKQRVELSDFEEARDKVMMGPERRSILISEKEKLNTAYHEAGHTLMAVLLQNTDALHKVTIVPRGRSLGATWTLPSDGRYTLQRKKAVDEMSLLLGGRVAEEFKFGEDSVTTGASNDIERVTELARRMVCEWGMSRLGPISFGQKEQPIFLGKEIARHKDYSEETAQKIDEEVHKFVMRAYERTKKLIAENADKFEALSRELFEKESLDIEDIERICEVKLDRIKDKLVYAGKDPKRGTDELEDPSAYQEGEVKSVKEEVFNTPIKPLKKSDKAESDKEEVKSIKKSSVKKVSSSTRKKKTEE >gi|343385655|ref|AEM21145.1| hypothetical protein, complement(573144..573797) [Brachyspira intermedia PWS/A] MLFYSVSFTQTYGYDKEYQKQLEKSGVEINDTQKQKVRNDISKWANFYLDKHYQYNEKATLTHPTSKEKKTFRFDCSGYVAAVYWTSNIAVFEKQAILDSGGVKTIYSTLSKYKKIYKGVLPNVGDIIMFDKTTSNDKKLTHAGIVIGVDKKDETVTYIHASTSKGLIIGYMNLKYPDLARKDGKIINSALKRGGGVSSLASHCFNSYGTILDIPEK >gi|343385656|ref|AEM21146.1| hypothetical protein, complement(573913..574464) [Brachyspira intermedia PWS/A] MPAFSQENTRLEIVKWANFYMNKKYKYNQSDTITNPFSKEKKKVNFDCSGFVNAVYWTAIEKPTIKLQGSTENIHFILSKANKIYKKGMPNIGDIIFFDGTTSPNKKLTHSGIVINIDEDETITYIHSSTSKGPILGYMNLKYPDLARKDGKPINSYLRRGDVPYSLASHCFNSYGTVLEKPN >gi|343385657|ref|AEM21147.1| hypothetical protein, complement(574647..575225) [Brachyspira intermedia PWS/A] MKHIFIILLLIIAISQVSYAYELRLHFSKSYIYDDTLYVDVRTYYENEIYQNIKKYIDNGIILFINYRIDLIKKNLFINDNVREIYIYRKLYYDFFTKEYVVLNSETMRETRNTDLEILIKNIYQINRIEVINVNKLNKNNKYIFKTRLSMQFQNAYPYLSVFFNIITPIQYRIKWLKSDEFSIKELYYNNM >gi|343385658|ref|AEM21148.1| hypothetical protein, complement(575305..576228) [Brachyspira intermedia PWS/A] MNNYKEKVKVKWRYNPLRIYETDRYFSPWLDPDNYNSSFWFGDILNANHLYQNKNFNLDNVVMYFSPKLAVDLAPIAFNIDEDKHRFRIGVAYYLKLFFSSYKKGQDQLYGTTFLYGNYMQVEAYFEYIFNNKLKVRFAPLRHICIHMGGDILGDETLYDKNKEEFRDVGFEQMHLSANYRWGWFSFYGGTSFAIAGFDISNLVNLFNIYAGADVRIPIWGEISLITGIHIGAYFDRINLINRTSGHGQGYPITDKYTEWTPSISTGIGFEIYRFVIGVKYEYARSKQLYAYRKMESRIGLEASLFF >gi|343385659|ref|AEM21149.1| CyaB, Adenylate cyclase, class 2 (thermophilic), complement(576400..576951) [Brachyspira intermedia PWS/A] MANSEIEIKAYIKDFDSVLNFLKNNAKFKKKYFKKDIYYAREESIKKGSIKTSDCIRLRIEHGGYTFCTKERTLIDGVEVNEEIEIKVSKKKARFIINFLSKLQKYKEYVKKEKKGYAFIYKNALVEISKIKNLDNFIEIEFLNSKETVENQILQLKSILNEIGIDENSIETEPYINLLSRKN >gi|343385660|ref|AEM21150.1| putative rod shape-determining protein MreD, complement(576955..577494) [Brachyspira intermedia PWS/A] MKRIVTVIITTLILLLIQSSPAYDLIRVALGAKPDLLLIFLTFIAFRYGSFDGIIYGFIIGLLQDIVSSGTFGSYAIIFLNIGFFVGFFNTRIFIKQIAAGIFVTLVGYLIKIVALFLVTSIYSDLSNVAVLIRSELLVGLPLTVILSSPAFILFEKVAPLIYDKQKIHVDDSTKEYTE >gi|343385661|ref|AEM21151.1| MreC, Cell shape-determining protein, complement(577491..578372) [Brachyspira intermedia PWS/A] MKLFIKHKLLTLYILLNLVAGMLMVLNRSNFVFNLQSIYALGVYPIQSATKSVSRAFVYLYTSITDIFTLQSQVQVLRDRIAELSGAALEYEQLSAENERLRALLNEAPTDEYPLEYAEIVSKDPQNFYTTIVINKGSAHGIVVGMPVISYQNGYKGLVGKVVEVRRYNSRILSLVDQRSQISVMLESSRTTGIMVGQSPKSTQTHLQYIDLQMDVEEGERVVTSGMGGVFPKGILVGTIFKVEKKNYGLFHDLYVEPAVNFSTLENVYVIKKIPDQEIIMLANEEDDNGEAK >gi|343385662|ref|AEM21152.1| rod shape-determining protein mreB, complement(578420..579424) [Brachyspira intermedia PWS/A] MFSSDMGIDLGTANTLVYVKGEGIVLAEPSVVAIEKSTGNVIAVGNEAKQMLGKVPNSIAAIRPMRDGVIADFETVEKMIRYFINKVHNKRTLVKPRIAIGIPTGITEVERRAVRESCEQAGARTIFLIEQARAAAIGADMPINEPHGNMIIEIGGGTTEVAVLSLGSMVRSASIRVGGDELDDAIIKYMQRTHNLYIGEKTAEEIKINIGHAYKGDISKTMDIRGRDSVSGLPKTLTINSAEIKDAIADILIEILEAVKSVLNQTPPEISADIVERGIVMSGGTSMLPGFTDLISMETGVPVILAESPLTCVAIGCGKFIEETRNLKNYRRYS >gi|343385663|ref|AEM21153.1| TPR domain-containing protein, complement(579449..580387) [Brachyspira intermedia PWS/A] MPYLYNVEKKISIHIIVITLIAAVTLIGVAYLFTSNYIEKKRLKSIYDYMISEDYNNASFLFNDLYSKRPLNKNILITGIDLYYDILIRSDKKEIIVNASENIIRYANQLLLSFKFIKNKNIIHQRLAYSYQRLGSAYYIDSYNSYIQAINEGDNRTSTTIELSKICYEIGLFKDAVKYLEDAIDRELKENSDKFINMELYYELANAYEGDKDYTKAIQILSSMESFNNNTMLESRTYFKLGNLYYRQGLYKESEFFYKKALEIDEKNPDLYYSIGTLYLDTKRRNEAIKMFREAIKIDNSYKPARDTLRRL >gi|343385664|ref|AEM21154.1| hypothetical protein, complement(580417..580821) [Brachyspira intermedia PWS/A] MFSKRNDNTESNSIIGEGSFFKGEFTLNGTLRIDGRYEGEKLEVDNVFVGATGKVKSNIKTVSAVIEGIIIGNIEAKNRVMLMPTSRVLGEIRTPELIIQNGVILEGLCIVSQDPLTNPKETILELYNNGNMDN >gi|343385665|ref|AEM21155.1| chemotaxis protein methyltransferase CheR, complement(580833..581648) [Brachyspira intermedia PWS/A] MNEIKLTEQQFNLFKDFVYRESGICFNVINKIILESRIASSMKERNLEVVEDYYKLVSSDKEELKKFLDNITTNLTKFFRNEPNFKLLKNYVLPKIMKYKKPGEQIRIWSAGCSTGEEPYSIAITCLETPGIKDRDIKIFASDLSLNSLVAAKEGRYEEHKVENVPKEYLKKYFDKLASGEYSIKNDIKKLITFDYHNLRHRGSQSNMDVIFCRNVLIYFDNESVKLTVNRFYDILNEHGFLFIGHSESLFGLDTKFKFNNIDNSIVYTKN >gi|343385666|ref|AEM21156.1| chemotaxis protein CheY, complement(581683..582102) [Brachyspira intermedia PWS/A] MSDINTKEADGINEFGKPYKVLIVDDSAFVVKQLQQIFVSEQYNVVGTAENGEEGVLMYKEYKPDLVTMDITMPKMDGITALTKIIEYDKNAKVVMVSALGKEDMVKKALLAGAKNYITKPLDRKKVLERIKMVLAKKQ >gi|343385667|ref|AEM21157.1| chemotaxis protein CheX, complement(582109..582576) [Brachyspira intermedia PWS/A] MRLDYIRPFTDASNEILQNYIKDGIKIGDITLKGDFVNASGIIAIVALSKDIVGHFIIDMELETAKKIVSIMNDREIKDIDKLSLSTIQELVNLIAGLSVTKLETDGYDVDISPPVIMKSKNLEVSISDSEFLHIKLDTSIGDFNILVAVESEKE >gi|343385668|ref|AEM21158.1| hypothetical protein, complement(583684..586191) [Brachyspira intermedia PWS/A] MSVNIEENGNLKLNAGNIVFYEGENVKNISIVTKGEIDVYISSKEILGIEDENEVMRYSCRLFSIPKNIMLGIGSYKSNSKYMFSFKAKENTEIYAVKTPNQEYVKSFFKVNKPYLTSMYHSIAYMILKSYEEYIKIKKINSDIKILSSNLAVIYFNLQQNKSKNIKSEIFKGYKEIYDDSINSGFNFPASFDVDFIRADHSEIYMHNKNQLIENTEKLEFEIDYVRRFLTMPKEIKNQFFTYDENMSLDASHMLYENLKKISSLLKNEIVEAIENILFLSSNEDESLFGEYAKTALDLDKQGKDNEVWVKYIKFMSNIIKDVYNKIKTEYDYDLHIDSDEIDSILRRVSANSITSSDDNIIAGIDDIDNIKVKLGFEELPEEVKNPTKKLIEMSGIDETKAKNFMKSLQAFRKLRDKFSTDDDVRKIRRGVSSVFFEIYKEIAKRAIINGDNNKLVKMFLNFGYMDDQLLTPNQIMDLYEIKDKSKTKRINVFYIDEWLQKIYDKEEPPSVNGFGQDYREALRELKKRGTINDKELEEHWESSSKRLEYEVDNMIETTHRLCYGQVSVYFPILHKDMITKDFERALIRRDFMEKSIKEITDIDFSAFYREVLYKNKELNIEKELVMQEVLPNIILMPTFGSRAIMWEELSTRQKNSTGRFLFPIFTSEEIDTLLIPTIGAFRWELCKTMLGPAWNDITQMSITSEYSDYVQFYRKNRNLSDEAKEKLKVQIKKCRNNLREVFVTDYNLWIRYESKGIMRLNRVARGILYRQVPFSKSIRVELEKQPMYTEIANRFKNIRNKKATELENRYFKFTKSGNPLPPELQHHIDFYKNM >gi|343385669|ref|AEM21159.1| hypothetical protein, 590163..590384 [Brachyspira intermedia PWS/A] MNNKERIIKTIKIIAYLFSYMMVTVVAFNYGYMYYAVKFDGASASPTVSFIFAVPFIIAILVCVVLIKVINKK >gi|343385670|ref|AEM21160.1| putative membrane protein, 591286..592020 [Brachyspira intermedia PWS/A] MANPVLSDKAFNYASSYENENTMTVNGAINKSIILTLVLILSAMVSVFFVLAANPGLLYPAALGSSIAAFVLALIMTFKKELAKVFSILYAILEGVAIGAVSYVFNAAYDGIVVQAVFLTFLDLFIMLVLYRFRIIRVTEKLRSVITVSTLCIGLVYLANFIMSFFGARIPFLYGSSPLSIGISIVVVLIASFNLLLDFDFMEKGEQYNMPKYFEWYAAFGLLVTLVWLYLEILKLLAKTRSRD >gi|343385671|ref|AEM21161.1| hypothetical protein, 593002..593709 [Brachyspira intermedia PWS/A] MNKKLLTIFLSLFLVGILSVSCSNADKTGAGDTTTPKTINTKYAGIWSSSDNPDAVEIDINGNIYEYNSTRGNKGEVLESTDPSYKVKIYGSEITITFKDVNNATVNINGQNVTYTKTPQSIEQFNGKTYASEKSFNVPELGARYLWASVKDSKFAMNINDNNTYAPGFSLDSYFTVTGYGTDYTFSTPDPQGTPDQVQGTLKFAPDGSSVTMRFTKNTVMPSIVGQDIVCNIKQ >gi|343385672|ref|AEM21162.1| hypothetical protein, 594291..594707 [Brachyspira intermedia PWS/A] MLSISCSNKDKTGSSDGSATTTKGIEQYNGNTYVSSKIQINNQLGYVWISVKDSKVAIKPNEDNNTSPIFDTGNYFSVTGSGTDYNFSIPDSKQNPDSIVGTLTFSDDASYVTLNITKNGDDPTGETLNKHFVCNIKK >gi|343385673|ref|AEM21163.1| restriction endonuclease, 594859..595860 [Brachyspira intermedia PWS/A] MERNYFLHRISHGYECSYPILEKGYLSTGYEMLFSEELYKIVENGDYYGEFKSYVENIWGECPKWIHHLWRFIHGFKKGDYIIVPQFGGLFSIYEIIGDNFIGKNDKELKSVLKPFINTEDYQKLDFFWKVKPVYTNIKRAEYANAELTRKMHYRGTNISCNDIAETINELLENINNNRPINLTYDILNTCSKNIFDLVRNRLNPDKFERLIGLYFKQCGADNIERPSKIDNPNGDCDIQASFDLIRTIIHVQAKFHTDYTDQWAIEQIKNFLEYKSSNEDGYSHIGWVISSCDDFSDEAKNLAIDNNILLINGKTFSEMLIKAGISSLEGNI >gi|343385674|ref|AEM21164.1| NorM, Na+-driven multidrug efflux pump, 596690..598051 [Brachyspira intermedia PWS/A] MANHIGTDLTEAKVVPTLLKLLIPILLSNMLNVVYNIVDSIWIGNIIGPLGLSAVAVSFPIMLIMGSFAFGINMANGVIVSQYYGAKDYDTVSHVIKVSTTLGVIILVTVGALMLIFSRNILVMMKTPENAMDMALIYLRISILGMPFAYTYFFISSILRAVGDTVRPLIFLIVSSIINIILDPILIKGFWIIPAMGLQGAAIATVISQFTSVFISTTYLRIKNSFIKINPFVFTFDLNMTKKILKLGIPISFNQFIVAFGWLVITRLISSFGEAASATVAIVNRVESLFIMPMGALGNAVMTMSAQNIGAKKLERVKEILKSGIVIGIIISSIMSIFSITNPYLLIRMFTKDTQVFEYARSYIYTIMPIFIFYSVMFVCNGIINGAGKTIVIMAFTTSTTLILRTILAYALSPNFGLVGIWLSMGICYIINTFFSMYYLKSNKWQKNSNITL >gi|343385675|ref|AEM21165.1| Na+/solute symporter, 598233..599663 [Brachyspira intermedia PWS/A] MGGTIVIIIVVLYLVAMLLIGVYSSKKISNSNDFALAGRNLGPVLLAGTLAATNIGGGTSLGLAEQAFGKWGLSAVWYVITASIAYLVLAFLAQRFRNAMVTTVSEYFYKRYGKANALVTSIIMGLPMIGITAAQIIASASILTVMTGWNYKLSVVIVTIVVTAYSSMGGLWGVAFTDLIQGSLVFIGSLVAIPFALNYAGGFDHVLANLTPAQKSFTAGMGWPTIISLTIMYIASYSVGPEISQRFFSARDSKSLMIGSLVGGLVCILYSLFPAFLGLIASSVVKDGLLTSELLTSEGTRYILPVLAMHTMPPVIVGLLFSALISATMSSADSDMLAVSVIATNDIYKKYINKDATDKQLLFLGRACMVAVGLISMFIAFKASNLITILMFSFSLRAAGVFIPYLFGNYTNKKLSAVASMGSLIAGSVVTIFFQYNKNINLFGVDPIIPGIVASLVVFLVLSAIIQPKPDSAKTE >gi|343385676|ref|AEM21166.1| hypothetical protein, complement(599814..600242) [Brachyspira intermedia PWS/A] MIKKILTIFLTLFLVGILSVSCSNADKTGSGETTKGIEQYNGNNYVSTSTVSANQYLWVLVKDGKIDMVTDTDNNTAPTYGTDIDFSVTGSTSTDYVFSSADGTIAGSLRFAPDGSILVVRFTKNPDASESILNTDITCNKK >gi|343385677|ref|AEM21167.1| lipoprotein, 601328..603664 [Brachyspira intermedia PWS/A] MHKYKPEILKELYEIVQDESIYLGDIDTSLIKDMSGLFSGSEREDFSGIEIWDTSNVVSMNSMFSFARKFNHNINNWNVSNVEDMGYMFRYAIKFNQPLNNWNVHKVKIMNYMFNDAMEFNQDISSWNVESVKDMTCMFEGCSKFNQPLNSWNVSNVENMYCMFAQSFEFNQPLNDWDISNVKDTSYMFYLASKFNQPLDKWNVNKVKNMSYMFGGTYNFNKYSSLENWDISQVNSMENIFQFCNNFQNFKNLKWTLYLHVLGDYYYGNDIIKDNLKEAHKIASESKNKKIISFKRKLENTYYNELKDLSDLKIFKSIEEAEDYIENNLNKKDEKKVDFIKEASVLIKDKSREVNIKVIKYIYLKYLELKKYIYRIVEIDSIIELLDKESFLSFAYNIYKETDKETAQLIYGLYGGYEALEEIYKKDGESKLFFNILSLNKENEYTIKILFNIYNNAKKMATKNNALDILIEIAKYKKNPFYNLELKYNSNIGFDKNSEKILDENYKLILNNDYSVSIFDIKESKILKSIPRNLDENKKEEIKHIREQVSNMIKKFSYILNQLLIAGDKYNYDFFKEIFIDNPIMNKFDLSLIWSLYNNSNNFITTFRYAGDGSYTNCNDEEVKIDNNSFISLASPIEMEEETITKWRQQLQDYELSQTINQLSIINIDKNNLENEIDKLQNIEIAYGTFKAFGMRYGMFPLYTEYRTIKEYTLTLDDGDTFTIKAKINGETDYADYKDKIKINIEFTNNENKEVSKRFIYTLLIFMIWDFRLTDMFN >gi|343385678|ref|AEM21168.1| isoleucyl-tRNA synthetase, 604461..607232 [Brachyspira intermedia PWS/A] MDYSSTINLPKTAFPMKAGLKEKEPKIIKKWEDEKLYQQLRELRKGAPKCILHDGPPYANGDIHIGTSLNKIIKDIIVRYKSAKGFDSPYVPGWDCHGMPIELKVQESLGDKYKETSKFIMRKKCRAYAQKYIDIQRKEFKRLGVMGDWENPYLTMSPEYESEIVEVFAQLVEKGYIYKGLRTIHWCMDCETALAAAEIEYDDNHTSTSVYVRFPVLNKINDKLDGNVDVMIWTTTPWTLPSNMACAFNRDLEYVAVEIDGRYAIMTTSLVDTVLSKKDMKAEGRDMIPVSMEEIEKLEIAHPFIKDRKSAVVFADYVEATAGTGIVHTAPGHGMEDYQTGMNYGLEIYCPVDKAGRYTSDFPEMQGMKVRDANPKVVEILENNGSLYHKEKVTHSYPICWRCKNPLIFRATSQWFMNMTHDNIDKRTVKALDNIKWYPTWGHDRMQKMLENRPDWCLSRQRSWGVPIPAFYCKNCGKTLLTAESTRHFAEIVKTKGMDVWFELEAKDLLPEGTKCECGSCDFDKEQDILDVWFDSGVSSFAAQKTNKDLDGVFPVDIYLEGGDQYRGWFQAAIWPSMAIRGIPPYKELVTHGWTLDEQGRAMHKSAGNVVSPLEVIDKYGADILRLWCISEDFTHNARVGDNMMKAIADNYRKIRNTFRYLLGNISDFDFTKDKIEVKDLLPVDRYALSRLHSFIKVAEKACDGYEFHLFYQRLINYCVVELSATYFDIIKDRLYCDRKDSVSRRSAQTVLVEILDVLVKIIAPVLPFTTDEVWGYYKGENASSVHLELYPKADDNLIDLELEKEWASILKVRDDVLLSLERARDNSTIGKSLEAYVTICTKEPATKELLTKYEKYLNEIFIVSKVTLSDSKDDTFIEGGVSFVKTEKASHEKCVRCWGHYDSVGTDSEHKELCTRCAEAVR >gi|343385679|ref|AEM21169.1| fused endonuclease-methyltransferase, 607486..610302 [Brachyspira intermedia PWS/A] MAKYNSAKQKSYDIIGHLVDNFKNGTKSKNETETRRYYIDKFFEALDWDVGNEKGKREVIHEDIVKVKGKTKFPDYGFYFKGKRVFFVEAKDTKVDIKNDSKPAFQLRSYAWSAKLGVSILTDFEELAIYDCTVRPKENDRTEAARIKYFTYEDYLKEEVFDYIYDLFERDNVANGSLDAYSENLCNRKGSETVDVHFLNTLDELRTKLAVVISKLNKEMSEKDINYAVQQIIDRIIFLRVAEDRNVENYGLLALANPKNKNEDDFKNYGFNAENSYYCNLNYIFDKANEKYNSGLFNEDDIVKNLNIDDKTIKEIIEELYTPRNPYQFSVIPVEIIGNAYEQFLGKTITIGKNHSAKIELKPEVRKAGGVYYTPEYIVDYIVANTVGEAIKGKKPEEIANIKILDPACGSGSFLLGAYKYLLNYHIEYYNKIKDRAKFKGSKEDVIKENGDLTIWIKKQILRNNIFGVDIDSNAVEVTKLSLLMKCLEGESPASIQNNQDLFNERALPSLEDNIKCGNSLIGNDFYESQSVLYFDEETQYKINCFDWEDEFKNIFKGGGFDVVIGNPPYVRIHLLDKIQLDYFKDRYSVYKGQIDLYSLFIEKSISYLSKSNGVVSFIVPRFLKFNIDSEEVRKLFLKYNIKQLVEVGKAFKNVSTECIVFLVSKDDKKEDIKIYDYYPNKDVTFVKTMDKNMFYNFPNIIFNTIVSEEEINIINKMLSISVKVSEICSLKRGMEIGKKDIRENKSGIPTLLGEEVSKYQIVYENTYCLENHKEVSRLKLFSEVEKILIRRVANQLIATYDNENYYFIKNLYSLISKDYNLKYILGLLNSKLLNFFFKKYFTTKKEDIFPEIQAYHINELPIYKIDLNKKEEKEKYDKIIELVDSMIILNKKLISEKNPNSLNMINRQISACEKQLDNLIFSIYNLNDEERRIIEGD >gi|343385680|ref|AEM21170.1| hypothetical protein, 610828..610989 [Brachyspira intermedia PWS/A] MNIIFDVTLGDIIGYIITIIGFGFVGVNINKKIDQSGSNVGGDQIGGNKKEVK >gi|343385681|ref|AEM21171.1| hypothetical protein, 610992..611186 [Brachyspira intermedia PWS/A] MSDKINQSKSNVGGDQIAGDKNTQINITQYLDNILCDSDVSIFREDFNEFLENTELSVLSYEKK >gi|343385682|ref|AEM21172.1| conserved hypothetical protein, complement(613638..613880) [Brachyspira intermedia PWS/A] MTFHKIKNVKALDNLILEIIFENEEIKYYDIKKLISEHKEFEILNDKTLFNLVKVDVGGYGISWNDDLDISCNTLYYSPS >gi|343385683|ref|AEM21173.1| conserved hypothetical protein, complement(613883..614137) [Brachyspira intermedia PWS/A] MPVISRFYGIIIKMYFQQKEHNPPHFHAIYGEYVGVIDINELKMIEGDLPNKACSLVLEWAKNNQDELLNIWNTQNFKQLEPLE >gi|343385684|ref|AEM21174.1| phosphohydrolase, complement(614415..615032) [Brachyspira intermedia PWS/A] MEILDLERAEYELNKAYKSNPTPWAEHSRYVAKAARIIASEYNKKSTNKKLDEDNSYIFGLLHDIGRYTGISVERHLIDGYKYCINYGWEKMAQICITHAFMIQDVNTAIGKFDMPEEDFNFIKNFVANAVYDDYDLLIQLCDCLALPSGFCLLEKRFVDAALRYGTFPQSALRWKRVFEIKSYFESTIGTSIYNLLPNIKDNIF >gi|343385685|ref|AEM21175.1| hypothetical protein, 615234..615416 [Brachyspira intermedia PWS/A] MFHTPPYHPHARNYFDFPMLFGPHFGIHGILSIIIKILIIVALVFLVKMLYNKDKNNKKE >gi|343385686|ref|AEM21176.1| AcrB, cation/multidrug efflux pump, 615894..619019 [Brachyspira intermedia PWS/A] MKNFITFIVNRPTTVFVTLVSMFIIGFISISRLSINYLPNMEVPIISIKTTYDNAGAEEVEKSVTRIIESAVSSVNNVKTIKSKSKESESNVEIEFNWGTDLQTAADDIREAIDMVRSSLPDDADNPNISKFSTDSEPIMNIAFFGTDNLASLYDLVDSQILTRLEQVEGVAQTEIRGGLKKIICVDIDLNRLNAYSININDIVHTLSLENQNVAGGETYEGVYKYNIRTTGEFKEVNDIEDVVIMLKNQVYPVKVRDIAYVHEDYEDDSEIVRINGQKALTIAVTKESGGNIIQIARDVEKRLSTINLPSGVYYQILFNSSDTIKNSIHNVLNTVWQGALFAVLVLMIYLWDIRSVFIISISIPVSVITTFILMYFFNITINVISLSGLVLGVGMMVDNSIVVLENIFYYSNYYSKYNINKNDKRTIKINNIKSSIIGTNEVSIAITASTLTSVCVFLPFLFVKGQMGQMFSDLCITVSISLLTSLFVALTIVPLLASRLNKLNPDSKLNLLLRKSENFFNKNLHNNVEKFYVSTLAIVIKNKKKSFALISVILTISLFLLLMNIGKEGYPVSDEGTIISRLRLPVGARVEFTDMFINKMEHDIESAVSNNMAYYETRVRTGRNEHHGEVRVKLIDRENGRKLDITHYIESIRNKVNGYPGRIELNSENTAMGKPKNYSAIIIELVGDDLDRGYDVASNVIAAVNNVEGVRNVLIKEDDSNHELIFDVDRDLVSKMGININTIANIIRTSFSGTTASKMTLNNSIYVDTDIIVRLEDRNRDDISSIQKMMIPTSNGIVPISSLVSIHKSTGPIEINRKNDKRIIEINASAYGRPINEIITDIRKELNKIYIPSGFSVNFSGDYEDMQEAFVQLIVSLIMALVFVYAIIAGQFESYITPFVISLAVPFALFGALIFLYFSGNTLNVYSGIGIIMLVGIVVNNGIVLIDYMNRVVIERNISWDNAALESCKRRLRPVLMTSLTTILGLLPMIFEIGSGSEMYRPLAIAVCGGLIFSTMFTLIIIPSVYSSFRNRFNMKIRED >gi|343385687|ref|AEM21177.1| hypothetical protein, complement(619961..620665) [Brachyspira intermedia PWS/A] MKFIIEDRVFETLNDMCVAVIIAKRINNQNKINDISIMLKESISNAEKEFENIKIKESEYIKCYRDAFQKLNINPNKFMCSIEALLTRISKNKGMPEINSVVDLVNAVSIKYKLPMGAHDLDSMNNEDFYIRYSVDDDTFLPFGETETEKVDNNELVYAVAHDIRTRRWIWRQSEYGKITENSSNIIFPIDAFIGINDDKAIKARDELAELLAKFFNCDIKTGIIDSKNNYMEF >gi|343385688|ref|AEM21178.1| 50S ribosomal protein L31, complement(620814..621032) [Brachyspira intermedia PWS/A] MGEAKMKKDIHPQYFETDVNCACGANFKIHSVQKSLHVDICHNCHPFFTGKQKILDTAGRVDKFKKRYGLKK >gi|343385689|ref|AEM21179.1| methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer), complement(621246..623066) [Brachyspira intermedia PWS/A] MSKNKKISLMIKFILPFAIFLTIMYFIILFVYKNIYINSFFNTKTFKAVSIHDLIESKLNNVNEVIDILDSYLKINDLPYEYFGDAITNIAKLSDDYMNIYFGNTIPYPTGGIFINSLEPFPPDYDQTSRGWYKSAVGNNKNIYITDPYVDFVTKKICITFAKAVYTNNNQLKGVVAIDFAKMDDIVQNTIYEENVNLVTKNGMFINNTDENKILSENNKIFNDINFPNIQQYIIDGKNYTNIYKNNWYMVQKLETVPWSIVLSGNLSQVQNQIKALMFILLFVLIIIILLESVLVVVIVNPITASLDQAIANIKLMNDGYFNSNFNEKMLSKKDQTAELYKNIKSMQDNIGKIVYNLKENINNINSSIDTIQYGSKNLSDRTTSQAASLEELSASTESLSNSLRNTSVNTEHAKNMSLEVANSTLTGVEAVNVISNNMAEISESSKQISDITKLIQSIAFQTNILALNASVEAARAGEQGRGFAVVASEVRSLAQTVNEAANNITKIVNDTVAKIEHGNESVAYSTDVLQKISSSAKEVVNILTEISTTALNEQNSIMQINQTIISLNSITQENSSIAEESASSSNEVKNMTEDIVNDINYFKFS >gi|343385690|ref|AEM21180.1| hypothetical protein, complement(623184..624584) [Brachyspira intermedia PWS/A] MKYRILLLLFIMSFSNIFAQNDNFLDTITLDKIKRIYPNDNVVSPSSYTISMNFDLNRYRLNEPITMEIKIHAKKGTISFTNSVNPFNNYSFTVYDNYNNPVVSSDNYTIWKYKSERNLDNSQDRIVTLNEGETFSYYIDLNNWFHFDKIGRYRIECSFNPMPEISDNFSMHADTAYFLLEAARVYQTQTNTAPVYITNNNNLSQQQGVLYDYAPSSIISNTLSAMKNRDWTNYYTYMHMPSIISISQRYYETYRNNYSNAYLEDFTDTGIRQKARELSFENYLRTQFSDNISANMLRTNFGNNFLNNLEMAYKSSNIRELAIRFDILYRTSLPEDRKLLFEEFKKYLTSAYDRQVRNAFIAELQRDIIATKDAKLKEHYTSVLDMIRKEYDPAVTYTLLNYTIDKTTVTQEYGLQKAEVEATLYHRYFNADTGDIYDPVVKRTFVLRRMGDYWYIVNYYDTVVNN >gi|343385691|ref|AEM21181.1| hypothetical protein, complement(624951..626801) [Brachyspira intermedia PWS/A] MNEIKKINLEAINKNIRAYPYDFINMLNNAKESDIILQVIETKSQKPSAKATKNGKQILLHSAYDPIKEANTLIKEIENDEDLDLVFVFGIGGGYLINAVKKLNVSVAVIEPDINFFNTLINNFKLDKILEDDKITFFIGGNDDEDIEKFISLTTTKKVKFFITRSYATLFAEEALHYQSKVLSVVDKKIININTISRFDKLWAYNIASNAVEIATHYGVNRFFNKYKDIPAVIVSAGPSLEKNITKLKEMKNKAIIIAVDTAMKPLSSHSISPHFVITIDPQKKNSKYFRNIHFKDTVLISESSVDHEAVESFNGSIFFIDSIFPLAKYFMKPLGDRGDITMGGSVSTAAYDFAVKIGANPIIMVGLDLSFPNHQTHIKGSYHEENFFTEIGKLDSYDSRIYKVLVSGNLREEKNIYGESVFTDSRFDMYRNWYEAQCANNSKIKFYNATEGGVIIKAMENITLQELIDKFDDINIQIDKNDKNTSDKTKILENLKNGLIKIDKEITSLKPYVEDAINLCYTINDELSRHRKVDKLISKLDESDAKILTISKVNEFLGITMQKTIKTITEGFDFKDETMHKSIISSFKLYEAMKDSIDFNHYIIERALIKINKEL >gi|343385692|ref|AEM21182.1| geranylgeranyl pyrophosphate synthase, complement(626903..627787) [Brachyspira intermedia PWS/A] MNLKEYMNIRLEEINKTIDNVFDKSSIELENSFIEMLKYPLDAGGKRLRPILTCLACELFNGDYKKSIIPAVALELIHTYSLVHDDLPAMDNDDLRRGKPTTHIKYGEANAILVGDGLLTHAFQLLSKTDVKDSTLRKLLFELSYAAGINGMVMGQFIDLYYEEKEINFDMLKILHAKKTGAMIRGAIRLGAIASENDNDIENITKYGEAIGLAFQIQDDILDVISDNETLGKTVGKDEKEGKLTYVKQFGLEGAKEEAKKVIEKSIEYLKPYKDSEAKNILIELANYIIERKS >gi|343385693|ref|AEM21183.1| hypothetical protein, 627956..628852 [Brachyspira intermedia PWS/A] MRNINRMNDYFVRYLLGSLGNEDILENIVNCVLRDSGFQEVHNLEIINPHNLPENINLKESVLDVKAITKDNRKIIIEIQLSGNIDFVKRIFYYISKNIVSELNENESYDIISQVISINFVNFNMDFYDEGKAHRCFKLIDTENHYVSLDMMQMHIIEVPRFIKILNISDIDDIKKNKILSWIEFFTVKDLDKVKDKLKEVNSIMSKVIDKYERFISSEEEMEVYNARDAFLYGQTIMLKKEREEGIKEGIEQGMEKGIEKGEKNKALSIAKSLKKSGLDIKFISDNTGLSIEEIEKL >gi|343385694|ref|AEM21184.1| Phosphoribosylamine-glycine ligase, 628900..630153 [Brachyspira intermedia PWS/A] MKILVIGSGAREHAICNNLLKNEKVSKVYCAPGNAGTAREKNCENVKISTIDEILNFAKKESIDLTIVGSEEMLVYGIVDKFEENGLKIFGPNKQAAILEGSKAYAKDFMKKYGVKTAEYELFTDYNKADEYLNRCSYPIVIKASGLALGKGVLICQDKEEAKNALEDIMVKKIFKDAGNEVVIEEFLEGVEASILSVTDSNVIIPFISAKDHKKVGDNDTGNNTGGMGVISPNPYYTKEAEELFIKDILEPTLKGIKAEKMSFAGIIFFGLMITKKGVYLLEYNVRMGDPETQAVLQLLETDYLSIIESAMKRELATLNIKWKKKYACCVVMASGGYPASYNKGYKIEGIDKINGQCFIAGAKLDENNNIITDGGRVLNVVNIADSLEEARKLTYADIEKIDFKDKYYRKDIGLIK >gi|343385695|ref|AEM21185.1| hypothetical protein, complement(630243..630941) [Brachyspira intermedia PWS/A] MLEKISLKNIKIEISLDNVIFPNNKIPDNLFGANAVNKSIVKITFPDTITEIGEYSIYCPELTEITLPSNLITIGNRGLIGCYNLKSLKLPNSLKTIGEAALNQCGFSSIEIPDSVTSIGKSAFGDCENLVNIKLPNNLETIPDSMFESCGSINTITIPASVKTIEKYAFYSCKNFENIRFLNDDPKSMTVGQSVFSYSPLKNVYIPKSSTASDVEWRNTLGIGVSVNIIRE >gi|343385696|ref|AEM21186.1| hypothetical protein, complement(630947..631198) [Brachyspira intermedia PWS/A] MKKIILTALLIILSSCRNSITLVEKISDTPTETIPDLEYALKIDEANPQNMEEALKRYAADHNGQYKLIFTGTSTKNMIFGLQ >gi|343385697|ref|AEM21187.1| GltP, Na+/H+-dicarboxylate symporter, complement(631786..632967) [Brachyspira intermedia PWS/A] MKKIGLLPRIIIGIILGILVGMFLPAPVVRIFVTISSIFSLFLNFIIPLMIVAFIGYGIANLTEGATKLIGITVAISYGSTLLAGSIAFLVASNLFPTLLGAAALSSVKIESGLDSYFTIPLKPLFDVTSAVVFAFILGIGITMLRPKKQGEELFSIVRDSEEVIQAILKNIIIPILPLHILGTFANLAYAGSIQHILIIFGKVFAVVITLHILYITALFIISGLIAKKSPLMLIKNQIPPYFTAVGTQSSAATIPVSLIAAEKNGVSEQIRKFVIPLCATIHLAGSMITLTCCSTAVILILGQNPTYSSILPFILMLGIAMVAAPGAPGGAVMSALPFFYMIGITGEELQGLMIALYLTQDSFGTAANVSGDNAIAVFVDWFYQTRIKKDAA >gi|343385698|ref|AEM21188.1| 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, 633232..633708 [Brachyspira intermedia PWS/A] MRIGYGYDSHIFSENRKLILAGIEIPYELGLKGHSDADAVIHALIDSILGALALGDIGSHFPDNDEQYKDISSIVLLEKTVSIMKEKNYEISNTDITIILEKPKLRKYIDTMRENLSKILKTDIENVSIKAKTNEKMDSIGRGEGIAVHCVSLLKKIK >gi|343385699|ref|AEM21189.1| SQS PSY, Squalene/phytoene synthase-like protein, 633835..634728 [Brachyspira intermedia PWS/A] MLARIIDTIEDSTHSAEDKETLITAFINILKTENIDNLENFKNVVIAHSINENDRVLIENIDIVLKSFFTFKQEIKNISISYLREMGYGMVYYQDHTISTFEDLDDYCYYVAGTVGLYLTELSKILDNMELDREKAKSLGRFLQKVNIIKDAKLDYEEKRVFWPISLFENENPAPYFEDGAYMDKSMEILVKMVESAMAEFRNSIEYIMAIDKKASGYRRFCLVAVLMGYESIKLMKSNYNIFMGETVKIPRKNTLEIVAKAKADYYTNKRLEDLLEKVFTTESVQSESEIPANNNE >gi|343385700|ref|AEM21190.1| TPR domain-containing protein, 634820..636757 [Brachyspira intermedia PWS/A] MFIRKICIVLAILIFSAFNLFSQSNKEDENVFKDSQYIKSEEEAKAAYSLALYYKERALASKTLTEQTVKDLESAKVILQEIVKYVQNKEIYITLAETHEALGEYYESSRIYDNLVFDSPEDIDILFKAAERNIFIMNNVDKARYYLEYAYEIDNSNNDVLILLGYTYYQKRELEKAVYYFSKVDETKKPSNNNNYLSYYNFYYGMSEFYLSRFSSAIGRFNKLQNVQLSPADKYTASYGIVKSYQALEKYNEAYSNSMDIEDGLFLSAYLSFMSDKYDDGLFEEIDPANPNTPKILSIISEAESSGYSNALNIIETDLDRREIDLDIIQAYYKMIYEVGSKENKMNSEMDIISFYLMIKNIDALPKHIDNLVSYDNSGKFNNLYLQAALEFKNQNNFQSSKEMLNKYLSLDNKNIKENELVSLVLTASDIGESELAISAIEKYEKEKYSYSYLKAYAALMNNDEVNANKYLDEDFEYFSNNKSNTNDYRINIPYVTSLALDNTNSALLYANYKYSQDTSSAENMNSLSWALVSLGSDLDKAIKLSQSAVQLEPNSPHYIDTLGFAYYKKGDYDNALKNLLKAALYVDDDSKAEIYAHIADTYYAKNDYKNALKYYRKSISSYKKEFDYDENRIKDRIESLTEKE >gi|343385701|ref|AEM21191.1| hypothetical protein, 636802..637521 [Brachyspira intermedia PWS/A] MMKKNIIIFIIFLLISSLVFGQNEKEVMKEAFTRFSKSPFTSIYSSGGAFYSGDDLDQMPMLVNYYKNSNNKYMNVVDGLLGSLIFDAKVNNNSLTLDLPEAEAPLKRNFDEFALEAPIMRFPKVYADILDYKFIDLSKKIVSSNITLGKNWHTLEIGYNDRVDTIVFSASTYRVRSFSTAFMDNVVNVELGSYTTVNNIPYPKEFIMKSKVDKRELRYNVTNVSAGDKAKQDAKKLGW >gi|343385702|ref|AEM21192.1| glucose-inhibited division protein B, 637524..638144 [Brachyspira intermedia PWS/A] MDFDLLLDNIRSSIKINENQKQKLIEYASLVIDYNKNVNITGAKTIEDFFNDHIADCLLALDIFADYDNIIDIGSGSGLPSIPLAIVFNDKKFTLCESKNKKAEFLRLAKDKLELNNIEVKCINAYEIKEKYDTITSRAFSDIATLLKIFNKLKTKKSKLVLYKGKKEKIEEELKEANIQKNKYNIEIKKLESRDKERHMVIISSL >gi|343385703|ref|AEM21193.1| hypothetical protein, complement(638148..639173) [Brachyspira intermedia PWS/A] MNKNTKTIIQVVIGIIISVICLYFAFRGIDIKESIEIVKNINIPYFIISLVLSVVIIALRGLRWECFIPLKKPIKKRTVVMATYIGYMGNNILPAKLGEVARAYILGMKENVSKSALIASVVTERLFDVITGGIILTISVVFIPNLPEKVTYAAIALFVLSIVGFLVLIFLVWQREFAHKVFHKIFGILPKNIGDKLIEFSCNFIDGIGFKNDPKHIFLIFFYTALYLIGQILTISFLMTAFNIKASPIIALFMFAVGGFGFAVPSAPSGIGPFEWAIVFGLSLIGIEKTVAFPYALVYHMMGIVPIVIIGFIFLFMLGVDLKTATKCDNNQTESKEQNNA >gi|343385704|ref|AEM21194.1| hypothetical protein, complement(639201..640718) [Brachyspira intermedia PWS/A] MNFFDYIKYNLFNIRTPELVEKMRMEEYSDRISKQKYNFVDLKTKSLTVTCAKFIFEMYKVVGPLLNPLKEEFIVKDGKQFSYYLIEVSFSDEMKELYATLNRDYMMSQIQSGKNPNAVFNEVKNNFVKFKKFISGESGKEINLTFNLLKDFAQLSNFDFFLFLRAFCPSFVEAAYNSNPQFKPSSNMQIVDDLVKLDYAVNSIVIRKELLSALKVFQQYLGMPAIPEKNIKSFLARVKYLQTPDVMHDIIVYLLKDFTYKCSINPSNVNIFVNYITDFTNNLKKDMDSIVAEIKSSKIAGMRNKIFNGIEILKMSNVNEEKNEQLEKFDCPIFTCVEPLQYIKTFIIEMFDINYKDPLNDMFLGAEFVSKDRNSLGLDAFYILNDSREMIQKFDTMLSPESENFKRLKTWIISKNKANANKDLIETMVNKIDTEGNKIVLSVYNSVIDLTTIVKNIVEDCRNNTKVEITNANKVQYLPKFNLDIAKKMLDDFDNFIALMKNFVR >gi|343385705|ref|AEM21195.1| TPR domain-containing protein, complement(640818..641639) [Brachyspira intermedia PWS/A] MAGKYDKQLAKYNDILSKKPNDPHALAILARIAIKENRISDAENYYTAILLKMHNHPESLYMMGFINMKRNKHTTAINYFKKLLENGKENVFIYEYLSSMDKDNRREYLEKALELSKNMKIKSKDYKRCSYIAFQSYAWKEYDISFEYANLAYNAKPTNDIINLLGCIYHHNEDYDKALSLFHEVNANYESKNPYVLCNISSCYNKKNSNKMAIRYLEKALEVNNNDKVIYYTIGSIYASTGNKKLAIENFEHALKINENYEEARKALEAIKE >gi|343385706|ref|AEM21196.1| queuine tR-ribosyltransferase, complement(641710..642828) [Brachyspira intermedia PWS/A] MSFTFNVLKNSSQTAARLGKININGIEIDTPVFMPVGTKATVKALTPLMIEETESKIILANTYHLVLKPGLEVLKKFGGVKKFMGWKGAMLTDSGGFQVFSLAKLRKINDDGVEFSSHIDGSKYFFTPRSVMEAEHIIGADFIMCLDECSKHDASYEYVKEAMFRTHKWAKECKEYHDSTPNSEYQYLGGIIQGGMFDDLRKESAETLVNMDFPFYSIGGLSVGETPEQMHEVLSKVMLYTNKQKPRYLMGVSEPRDILNGVMEGIDMFDCVMPTRNARNGEAFTMNGVVRIRNSKYRMDDEVLEEGCDCYTCKNFSKAYLNHLDKTHEILFSILMTIHNVRFMQRFMKDLRNSIENDVFSDYRKDMMNKFY >gi|343385707|ref|AEM21197.1| methyl-accepting chemotaxis protein McpA, complement(642920..644692) [Brachyspira intermedia PWS/A] MALIVITDIKASESLKKTALDGYNNIVFGYASLIDTWFDEQIIIAETYGSNKELMDYLKNSSEVEKEAAYNRLKKIQSINKYAINIGLTDIDGNITLDSTDENYIGKSIFDFNADLKDKLNSEKNTIFSEEITKSSITDNWSLTLIEKVFDDNNQLIGHLYIIFDWAKFNIQHVEPLVVGKTGNMFMIDNNLICKIHSKTQYINISAPSELKGGFDLGKGVFHYVWENEKRVSSVITLKTLPWVLGISVTEKEIYEQNQILLIIIISISSAAILILSAFIFLFIKSITKPLDILVNSAKEIASGDLRNTKESINREDELGELSNAFTYMRNKLVDTIKEVEVSANNISTVAKGLSEQNNNLSNRTESQAASIEETSASMNEITATIKDSADNSINGNKMILDAKYSIENAGNIILETTSNIEEVNEASDKIKDITKIIEDIAFQTNILALNASVEAARAGEQGKGFSVVASEVRNLAQTTQTSVKSITELIENVSDKIDKATGTARESQKIFVDVQNKINKASKIMKDISQNAVEQQNGVDQVKIAISQMDSDTQKNASLVEDAASSAKTLFNQSEKLMETVHLFKLPVK >gi|343385708|ref|AEM21198.1| methyl-accepting chemotaxis protein McpA, complement(645047..646864) [Brachyspira intermedia PWS/A] MPLIIISMVTFFIVALIVITEIKASYAIKNATYTGYNNTVMGFASLIDTWFDDQLAIASIYGTSEELIRYLQLRTEDLQILALNNLKKFRSLNEYAINIGLSDSNGTVLIDSDNPDLVNQNIFNIHPDLKNKINNNTKGVFGENITHSLTTGGWSLILLEKVKDNNDQIIGYLYVILDWSTLNKNHIEPLVIGKTGSMFAIDKNLIIKIHSKTENINQPAPTQFKDAFNLGKGILSYDFNGESRVSSVMTLKSQPWVLGISVTEAEIYEANRMLMLMMIIISVIAIIIIAVFISMFIMSITKPLHLLVGVAKEIADGDLRTTKQKIKRKDELGELSDAFVAMRKKLVDTIITVEESANNITMAAKELSEQNTDLAHRTESQAASIEETSASMTEISSTIRDSAEHSINGSKMILDSKSSVENAGNIISETTSNIEEVHDASSKIKDITKIIEDIAFQTNILALNASVEAARAGEQGKGFAVVAAEVRNLAQTTQTSVKSITDLIENVYEKIDKATGTARESQEIFIEIQNKIDDASKIMQGISNSAVEQQNGIDQVKIAIAEMDSTTQKNAALVEEATASAELLFAQSKELMDAIHLFKLPDGTK >gi|343385709|ref|AEM21199.1| conserved hypothetical protein, complement(647001..647414) [Brachyspira intermedia PWS/A] MKNMKKKLKTLLSFTPLFIVIIIILWYKSPINGIKCYPESVSKIDITYNGNAIIVTNTNDINFIIKSLNSISLNKSILKINKSKIGYIIDIYSTNKNMINNLTIYSSEAASIGNFYYTDKNVMLPYEYIKNLYTNVN >gi|343385710|ref|AEM21200.1| methyl-accepting chemotaxis protein McpB, 647652..649463 [Brachyspira intermedia PWS/A] MPLTISIITTILLVITIIILSYKSYLGITKSTYAGYNNTIEGYKSMLDTWFEENNTLIRTYSITPSIINYLSGTQTPEEAVALIDTFKQFEAINKYSLDIGVTDGNGVTLQNTKSINLGRNIKDLRPGIWDNFVKNNYDVAYDTKVIKSTISDNMTLAIIAGVKTNNVLIGAVYMILNWDALGEKLGELQLPETGRLFAIDYQRNISLDTRKQINTSANQSYDNVIKDNKDSGILKYISDTNGEKRTAIYTRMNTMPWILSMATDDNVIYAENISMVRIAIIVCILSIIFVNLFSVSYITKTMSPLSVLMKKANKISEGNIELKSSANYRKDEFGELEKAFNIMSQKLAEVVSNVNDASNEIVLASQRMMESSVELSSRTDSQASSLEETASSLEEIVSTIKASADNSVSGKNMMSESMTHIEGAANIIAQTVSNIEEVHQASDKIKDITKIIEDIAFQTNILALNASVEAARAGTQGKGFAVVASEVRNLAQTTQTSVKDITALVDNTAEKIDTATNTARESQEIFIQLQDKVSGTSDLMQSITSTSLEQEAGVSQISIAINSIESATTQNAALAEESSELSKRLFDKAKFLEESIKFFNIS >gi|343385711|ref|AEM21201.1| tetratricopeptide repeat-containing protein, 649477..650058 [Brachyspira intermedia PWS/A] MNDNLIDIKNLAKQKFNLSLYKDVVDIINNFLNDFRNCSDSEIYYIRGLANQELKLYENAIDDYDKAIKLNSNDEKMYYLRALSKFQLGLFEEAIRDYNKFIEFNPNYVWAYNDRGNAKYNLGLYYDAIEDYNKAIELKPDNELAYHNMANAKYNIGLYEEAIKDYNKVLELNPNANIVYCDKNNLKDINNDQ >gi|343385712|ref|AEM21202.1| hypothetical protein, 650137..650991 [Brachyspira intermedia PWS/A] MKKFIFIIFTFLLFLSCGKGGSSEQNVNFLATTSGVSAPPPAPQARMEEESTVSDYADSNGAAVERKLIVSVDIRVNSKDVEKSYKSIEEKLKEYNGYFDNVESSKNRYYLNIRIPKENLYGFIDFIEQNEKVENKNINTQDVTETYYDTENRIKNREVLLEKLRNYLREAKNIDEILKVEDRINNLTYEIESMKGNLKNLQSSVDYSRVTLNISNPEAIKSNTNIYNKYLNLISFLKEFFSGILFFLVGFTAVAVPVVLILALFYYICFGKIGLIKKLYKKIK >gi|343385713|ref|AEM21203.1| hypothetical protein, 651136..651333 [Brachyspira intermedia PWS/A] MRKGIIIFISALIMIFASVSLFGQYGRGYGDGRGYGNGRNRGNSCGYNNNYYNRGNNNGCYYYYN >gi|343385714|ref|AEM21204.1| hypothetical protein, 651382..651900 [Brachyspira intermedia PWS/A] MKNKISKKAVILISIAIMVLGSVSLFAQYGRGYGRGYGYGDGYGRGYGRGYGYGDGRGCGYGRGYGRGGCGYGRGYGYGNGYGRGYGYYGAALTQEQIDQVRSIQDKYFPQMDSLRMEIYNQTQKLDAEMRKETPDQNAVNAAIDARSKASADLQKLRSQCFLEIDKVYQNK >gi|343385715|ref|AEM21205.1| hypothetical protein, 652021..652488 [Brachyspira intermedia PWS/A] MKIFLIFLVAASLAFSQYRYSPTPRVGNVKPFIPSTAKNAIPVYPYKNDLSTPRFSNPGYTKTYYRNGRFYKFGSGYMSYWDRQKLRDIDGRYSPRYRMLENQMRVNNSTIKSQMHQRNPNNNAINSAVNDNFRIEMEMQMIRTLRELDINRNFK >gi|343385716|ref|AEM21206.1| hypothetical protein, complement(652924..653502) [Brachyspira intermedia PWS/A] MNNENNKLHSDNKFSIKIYINNIRFFAVMMIGLIIAILLIDVLFTQNPDEDMKAAIIFVVSFFMFGVIILSIILIRSVIFKKASFILDDKGIYYNNLLVKSYIYVLWKEIKDLDIIGSYLFIYLKDPQTYYFRKFKGRIVSEDPLYIYLGDLDISNKFINSMFKFFDDNYRNIEDDDNNQEDDYKKYYRDYY >gi|343385717|ref|AEM21207.1| hypothetical protein, complement(653528..654049) [Brachyspira intermedia PWS/A] MNEELNNKELNNNETLINDDDSFPEIEIYVNKKKLSILIFVSLIFILMGIFIFINRKEFKEEIISIFILIFFSICILTFIMQWLKSRKPIITLDENGIAYYVLLKNQNIFIKWTDIREILFSKTFIYIYLKEENSLLENKKNNDEPIVIYISEINMKRNTLIYLITHYFENKK >gi|343385718|ref|AEM21208.1| hypothetical protein, complement(654177..654353) [Brachyspira intermedia PWS/A] MRLDEPPYFYQCKKCKRRFTVRRKKHTINLLIIKLNKQKCPYCKSSRTRNIDDIVKAI >gi|343385719|ref|AEM21209.1| hypothetical protein, complement(654419..655492) [Brachyspira intermedia PWS/A] MKIKITLILSLIFVVIILKIVTFSKNFVENYYSRLIYKNIAGTINRISSNFNFSLGEILLFLFIIAVIIFIVIAFKKSFFNADIKSLADKTKTALNFLYILACSMIVIYIIFLLVWGLNYHRVPLIENYPPREINNDDIYLLADTLIKNINSIKDEMKYKEVNTNYQALNRMIESEYNKVFEDFEFLNMHYSKTKPIMISKLFLHLQITGIYSPFTSEANVNILIPSISIPFTIGHEMAHQIGIAYEDEANFISYVACSKHTDPFVRYSGNFEALLYVLGELKRDENYAHLMANLNSDTKEEIKKYYEFWQQYMGNLSKVSQKVNDTYLKANSQDDGIKSYSRVVKLLVLYHNINPQ >gi|343385720|ref|AEM21210.1| hypothetical protein, complement(655541..656344) [Brachyspira intermedia PWS/A] MAKISEAAKADCTRMQNKYKNLLAGIESKLVKVEKDLLTLEDSFEIAAKKIEAAVLYIQASSYIATTCYIAIEFIDVRSDNQLNDGRRYINKAIMLLEEVFGNHTDDSLSLNEEIHEYFKGKLSDEWKYKFICSFGYVIDYFKYCYGENSKWLQNFVEIEARFATIGKNMIDFKTYIKELSPELEGYKFRVKMMELVKKLLASAAEQYRTKYELQDKRLDDMKMALNIIASLRRIHVYLNENEESEEKKKMYDLWKKKLDADIKKMK >gi|343385721|ref|AEM21211.1| hypothetical protein, complement(656383..657129) [Brachyspira intermedia PWS/A] MEERKSIDSFFSDLSMGLLFAENTNEIDRVVDLFLEKTCQYYGFDCGEVYFPKGDYLILRGVYGIDRYYVCKVDFPISANHCKDVLYDQKVYVGENINHTNMEVFSNYSSMFVLPIFFYANPIGVVLFRNRENKIEFYNSIIDEIKNVIGHFAVYANNVLQSVIFDDNAYRESIIDIIVENTNSYIEPELAEKVFTPFFTTKSHGVGIGLAISKRIVEAHGGSMVIKSVNSPSKITTFFVSIPVNLNN >gi|343385722|ref|AEM21212.1| alpha amylase, catalytic domain protein, complement(657171..658598) [Brachyspira intermedia PWS/A] MKTSGYNLFPPLLGHIKNWYSHIDRIKNMGFEWVYINPITYPGFSGSLYATKYYYKYNPAFFTSCEQEIAEKEIKDFLAYCNNKNIKVMIDLVINHSSKDCNLTNEHFEWYKTKDGALQSPGAWDNGKWIEWGDLAMFNNKRDPNEKDDEENADNKDNSEEENNHEINNNEILNPIWYYWNDLIKHNLDLGFSGFRCDAAYKVPKELWKYLIDNAKKINNEVIFFAESLGCSMEDTKKLIKAGFDYVASSAKWWDYEGEWFIEQYDLAREKCKQIAFPSNHDTRRLIEEYDGNIWRVKQTFLFTAIVCDMWMITLGDEFGFLKRCNVVGGNEKDYENINYDLSEYIKDITNYINNNPILANCGKIVSIDIEEKKKLEKLKKETDTHYEYHEHHEYYQEQERNYKEKKEKDPFRKFYKYSLDENDKLLIIVNITSKTRQLDTKEYGIKEDISFENKIENITETIDILPYQLKIFAL >gi|343385723|ref|AEM21213.1| putative two component transcriptional regulator, winged helix family, 658833..659540 [Brachyspira intermedia PWS/A] MRVLVYDSSLQIRDSFISILITAGYEVVAVKDKNNILSMFGKLPFSIAIIEVEENDTEMESILEKIYLDDRYHGVHVIVHVADPTREFFTKMMRIGVSGFLLKPFNEKDFLNRFNVLIDKAGVKPKKLKHIVINNLDNFKLVFRHDGVRQILHGMIIEMSPVGLKFIMPPEEASLEVGHVIKNASMSISSYKISFSINILEKIGNEYIGEFADLSVFNSKLICKFIYDKYIEKLK >gi|343385724|ref|AEM21214.1| phosphomethylpyrimidine kinase, 659576..660385 [Brachyspira intermedia PWS/A] MVKALTIAGFDGSGGAGIQADLKTFSALGCYGMCVLTALPVQNTQGVRSCYEIELKAIKEQLECIFDDIIPDAIKIGMLFNSDIIKLVADFLSNNAKNIPIIVDPVMVAKSGDRLLLEEAVDSLKKYILPISTVVTPNIPEAEDLTSKKIKTDDDMIDAANDILNMGAKNVMLKGGHLEGELSRDLFINKESKEFLDALRIDTKNTHGTGCTLSAAICSYIAHGKTPLEASKLGKEYLFNALQAAKVDSVGKGHGPVHHFYEAWKHLNI >gi|343385725|ref|AEM21215.1| alkaline phosphatase III, complement(660888..662534) [Brachyspira intermedia PWS/A] MEKIDIKFLQIIKIGEKSMIRLLPILLLAVFFIGCGQPNYANSENSIKAKNVIILIADGQSTDVITYSRWINGGESLAIDEMLSGAVRTHNADSPIADSAPAGTAIATGYKSSYKQFIGLLPDEAILPNSSIPTEARSPIANVLEAAQLLDKATGVVATAEIMHATPAAFSAHDITRKDYDDLSEQQIFQDIDVMLGGGYKFFTKEGRKDGKDLISEITNLGYSIIRTSDELNSFTGDRVVGLFADADLAYDIDRNETSQPSLAQMTSKAIEILSKNKNGFFLMVEASKVDWAAHANDPVGLVYDTLAYDAAVKVALDFAKKDNNTMVIAVTDHGNSGFSMGNYDTSSNYQQIQLESLIDPIKKASRSAEYIARKIEAGEDIRETMSKYYSINDMTAAEVNSLTGKTGDDLHYAIGPILAKRAYLGFTSHGHTGEDVPLYTYLPNNKRIIGLIDNTDIAKNIAKAMGISLDEASKKLFMSEDEIKKAGAELTSDGQILTIRMKDKTAQMMKNRNIITVDGEKKTLQGVVVYNESKWYFPADVLDILNK >gi|343385726|ref|AEM21216.1| hypothetical protein, complement(662714..663457) [Brachyspira intermedia PWS/A] MKKIIPIVLFISVLIFSCSKTDTTSNQKGTAEAGTMDLDFQAVFGEKANDDNNLMQNSYLKVSGTYGNIDAKVDATTGASTPKGATKSWDSYRYENNQYANNKIERGLGFFVLYGVSPAKTYNFDGMTGTGTSQKVLNGTNGPIITGTGVTKDETGVITIRYAHAGGPTVYPWVYELKSDTNGIFKIGYGSDNNKVSTSQISNDINFADIQMVTDKAKDGIPYWQGDLQGTFENDTLTLKGTLKEVK >gi|343385727|ref|AEM21217.1| glycyl-tRNA synthetase, beta subunit, complement(663693..665786) [Brachyspira intermedia PWS/A] MKDLLIEILVEEIPADFAYPASVSFKKIIENTLKNNGINFSSVNSYTTPRRLAILAEDIEEKSKDEVIEFRGPLFESAFKDGAPTKAGEGFLKSHNIDANSIKNIDENESFDKPYIKDVNGKKYIFVKKEKKGIETKKLFEEKLESIISSIDFKKKMRWGNKDFAFVRPIRNVLALFGNEIIKTSVAGIETNNKVTGHRLLSPEFKEINNPKDYEKILLEKHVIVSREKRLENIINQLENIEKEHGYEAVSKKKVSEIVVDLVEEPYLLTAEFDSKFLEVPKEVLTSEMIEHQKYFPLCKKDGTLTNLFVITANQPKTPQIIAGNIRVLTARLSDGKFLYQEDIRKGMDEMNERLEMLMFRKELGSVADKVKRLEKNSELLIKLLGYEKDKENILKAIKYMKSDLVSNMVYNFPELQGIMGGYFAKSMNLNDDVALAINEQYRPLFAADEIPSNDTGKAIAILDKMDNIAAGFYVGDIPTGSQDPNALRRQALGIINILIKSKKHVNLKKLIEDSINSMPKDARNNKSEDLVKDIFEFFKSRFENDIDFAKDSVAGVLSTGIDDMYDAYLKIEAIDAFRKKNEELFSNLLTVFKRIKNMIKSAKDVNLDESLLKEDAEKYLYNTYKEKLNEVNKLMENREYEKTFALLASLYEPLDKFFKDIMVNVDDEKIKNNRIALLSSVDKIFKNMLDFSSLVK >gi|343385728|ref|AEM21218.1| UDP-3-O-acyl-N-acetylglucosamine deacetylase, 666026..667318 [Brachyspira intermedia PWS/A] MQTITTKQNILIIDDEEDILTTCQNILEDEGYGVDIAKNYKEAEDILNSKNVNLVFLDVWLPDVDGLDILANIKEKYPNTIVIMMSGHAGVETAVRATKMGAYDFLEKPISISKLLSSCEDVFKESTNKTESLDNEENESNHHHNNVGYKVKQRTIAKSIVVSGFALMEGRKTALTLVPAEVNTGIVFIDINTNTHIKLSHNNILSKDKSGAVNSTALISGNRYIKTTEHFLAALHMMGITNLIVKCDGEVPNVDGSALVFCDALKEAGFVEQDDYIEPIVIDQTLTYGTVNDNETYIILSPYDGLEVSLRIDFAGSIGVQEYTYKFDNFDQFTEEVGRARSFNTIDNIDYAQKMGMAGSGMIGSHILLCDGKVINTKLHFDNEFVRHKILDIIGDLYILGRPIRGKVVANKSSHSFNHSVVHDLANRYL >gi|343385729|ref|AEM21219.1| RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32), 667376..668230 [Brachyspira intermedia PWS/A] MSESRLRTNTEEQNNISLYFADAKKEKLLTREEEIELTKRLKEGDAEARSKLIRSNLRFVITIAKQYKNSGLLLEDLISEGNLGLIIAADRFDPDKGYHFISYAVYWIRQSILRAINEKSRLIRLPLNKAMDLVDLERAVHQYYYKSGYTPDVNELAAILNKDPNDILHIMSMSTEHVSLEGEYNYDGMKDRLIDTIEDKTSKNVEETAINKELMEELKTAIESLSDIEKQIINARYGIDQERKTLKEVGEMFSFTKERIRQIEKKALRKMHSQKYSSLKDFLK >gi|343385730|ref|AEM21220.1| oxygen-independent coproporphyrinogen III oxidase, 668235..669188 [Brachyspira intermedia PWS/A] MSGLYIHIPFCTYKCSYCNFYSIVNKNDIEIYKKYIESLISELKLRISDYKSEIETIYFGGGTPSVLGTDLLKYLLDNILNIVHNKDLKNTNLIKEITIESNINDINAEYINFLENIPNIRLSLGIQTFNEKSLAIINRHTYKKDIINTLKLINKSSLENISLDFICGLPLNSENQIIDDILFSLDLLPKTKHFSLYYLELTNSLQRKWEDLLPNEEESVIYYKKASDTLEGLGFKRYEVSNYSMPNYNSIHNSNYWLLKDYIGIGVSAVGCYNDNRYSNVKMLRDYFDFIDNNNLPIKENEYLDIDTRKKNLYSFH >gi|343385731|ref|AEM21221.1| hypothetical protein, complement(669359..669520) [Brachyspira intermedia PWS/A] MPQYEIAKHLNASLCSITRGAKELKKEDSALAIIVDKYLINDKNFQESLSKSK >gi|343385732|ref|AEM21222.1| ankyrin repeat-containing protein, 669827..670402 [Brachyspira intermedia PWS/A] MKKSNKNNRNSKNIKKISTKENTKNNLFIILFAIFVLFTVFIYNYYNKKINSVSNINEVDSQGLTIVMKALLNENNQLNINDIKRLIRDNRKNIDYKIRDSESKTLLMYAVFNGDTEIIKDIAKYGNQLNEIDNNGRTALHWAVYYNKYDAVVALIELGAKDYIKDDYSLTPIDIAQYEGYEDIYEYLSNL >gi|343385733|ref|AEM21223.1| DNA polymerase III beta (beta clamp) subunit, 670514..671641 [Brachyspira intermedia PWS/A] MRFRCLKKDIVKSIGVTENVVEGKVIYNIESNVLFHLAGNMLTLTATDGSVWARSRIILDDCDGEGAVAVYAKKISSILKEMPDGLITINVEENEKINIESENGKTKHLIIGMKTDDFPAYPESNGDISYIMLPTKELVTMINKTISSIAKEPFKPALRGICFEKTDSKFLAVATDGRRMAVIEREFEGVENGSFSIIIEPKVLNEILVTANYDEVEQVKMGVDGQQVYFQVGKYDFVSSLIEGKYPNFRQVIPKEFAYSFRVNKNDLLDAIRRIVPMINDVRSKRMILTVSEESLKVKGINQEMGESLEEIDIKYSGEEHSVAYNYTYIQDVIKQIDSEIVTFMVNKDSSPTMVKEIEREDYYYIIMPMSIGEE >gi|343385734|ref|AEM21224.1| hypothetical protein, 671664..671852 [Brachyspira intermedia PWS/A] MEILDLSVLDKESKKQIIDFYDLLLNKQKNSSKNDLNKFSGSLKILEKDPLEFQKEIRNEWK >gi|343385735|ref|AEM21225.1| PilT domain-containing protein, 671839..672207 [Brachyspira intermedia PWS/A] MNGNNILLDTNAIIYFLNGKFLLDNEYNIFISIISEIELLCYPKITSKEENIIKDFLNSINIINLDNYIKNETILIKKEISIKLPDAIILATAKINNLILLTQDEGILKYNGYKNIDIRKCF >gi|343385736|ref|AEM21226.1| protein of unknown function DUF368, transmembrane, 672356..673210 [Brachyspira intermedia PWS/A] MKILGNYIYTIIKGFIIGASMLVPGFSGGTMAMILGIYDKLIASLSGVLTFSKNENYFIKNKLNFLFLIFFCVGSILGMVIISKPLSNLIEKYYTVSSFFFMGAALGGFNTVYNKTKAYKFDFLSIIYILLGAGIVYLISIIPEGFFSSTGDRSEMFMYFILIVAGLIVAIAMILPGISVSYMFLLLGIYQETIDAVHDLYIPYLAPLAIGSILGVVLTTKILEYWMEHYVKSSYLIISGFVLGSIIQVFPGLPKGIEWALCPIMFLAAYFLIRLLQRFDPDNR >gi|343385737|ref|AEM21227.1| hypothetical protein, complement(673513..674136) [Brachyspira intermedia PWS/A] MIKHFIFIIFIYCLNAYSIMPDDIYKLSDLKYNGYNIQREKSHIIGFHKDEYNYDLFLEDDNFDTNNLFIQTFDRDADTELKINTKQNQKYNIKILEINIIKLGRILNTYKINVYPALFNLEITDGYNNYKSIKENKLFTIKINKNIFDEINERNINSFLKMDFYLNGSKKIKNFKEINNDTKTFDIELFSRYPYYFNVYNIKVIYD >gi|343385738|ref|AEM21228.1| hypothetical protein, complement(674144..674659) [Brachyspira intermedia PWS/A] MGCLGVFFALSDRDLNKLLKTSRFERPDFISEDLEEIYFEKHTKYIYELDKSWDAMHRCLSNDGLLVFGDDNYPFGSIIMGGDVLYGNGDDEEDYIITLKKPNVVKDIASKIESITKEKFKEKYFKIDEKDYEYPLSDEDFEYTWDYFYRSIEFWKNAADSNRAVIFTVDQ >gi|343385739|ref|AEM21229.1| hypothetical protein, complement(674700..674963) [Brachyspira intermedia PWS/A] MNQEPDNDDILAITMQLILARIIMISNLVASISLIVINEGIKRYYFIATLVFALFLVIYFLKSIKIKMSLIYSIILAVIIFAANYFL >gi|343385740|ref|AEM21230.1| FtsA, Actin-like ATPase involved in cell division, complement(675025..676272) [Brachyspira intermedia PWS/A] MKEPILAGLDVGSASIKTVIARVNNDKLDVIGIGESESEGIKKGVIINIDAAANAIEKSINEAEHMAGLQAPDIIATIGGDHIKGLNSKGVIGVNTKDKEVTPAEIERVLESAKNILIPADREIIEAIEQEYSLDGQDEIKNPVGMSGTRLETKVHIITGLKHVSEHLRKTLNKMRFSGKDFIVNIRGSSEACLTDDEKELGVVVFDIGHSTTSLMVYLEGSVWHTAVIPVGSQHITNDIAEGLRITIPSAEKLKRDHGFAFIDMVGEKEIIEVPTASGQMRTIPKRVLTEIIQPRVEEIFSLCGKELNRMKYIDSLSAGMVFTGGGALLPGLVELAKAYQTAVKGAAPISARIGVPDKIEGIRDIANNPAYSAVIGILMMSLDEATQVNIPHKKTSEKGRFKFNFKNPFSEFFK >gi|343385741|ref|AEM21231.1| hypothetical protein, complement(676381..676875) [Brachyspira intermedia PWS/A] MFKYILLISFALLVSCSNNNDDKETIKRVEIILSDEDFKENVEVKKYDEDKLKNLALSSLKEFYSLPYNQDSVRIAYEKFYSTNYKEVLRKSRNIRNADEYVQSDPSLDFEFETTIEKVYDIKLEGQKAYIDADSSVYDRVEDTTSKARQTFVMSYENNKWVIL >gi|343385742|ref|AEM21232.1| hypothetical protein, complement(676879..677544) [Brachyspira intermedia PWS/A] MKKYIFILIFLFGCTLFSQYATNDIYIPPNNNNNNTQTEENNQNNNEYITNDAIMGRQPAVIDTPITGFKNITLGATRQDTINAILSDNTMTLPKQYMTGTVDLNAEESATFLALEENKFYKSGYFIFKNDALYSITINFQPNQVDFLELLSALNAKYTKGAFLNANTVAWQNGDIRIILERPSVVKYIDMNNVTTTSDTRIKEKEAAPPQNTRKSILEGL >gi|343385743|ref|AEM21233.1| hypothetical protein, 677848..678444 [Brachyspira intermedia PWS/A] MYIRNYTSKDIYIADLDVVNPYFRSREHSSYLEEKNIKVIGSYLPQSGADIPAVSAEVYSIFERKEIIGIIDMGGNSAGSLSFASFRNNVDIDETDVFFVFNANRKENSTFELALGHLIDIEAVLGLKVTGIINNTHLMNDTSLDDIEKGEIIAYNLSKEKNIPIKYTCVDRKFYQNNSKILTKYDLFVIDYDIKNKI >gi|343385744|ref|AEM21234.1| hypothetical protein, 678465..679229 [Brachyspira intermedia PWS/A] MDYSNVRLYEIASMLSPSVYETIFYSQYQGRSDKDAIILDDETFERCHVSDNVYKNFLFANAMRLGKSIDYIGLNQMHSSIIEDMRITENDVSMKLNDIALTNLADTLIDIKSMDVKLEPFYINLIFKGINYYSNNYIDENEKLIPTDESPINSMYCQDQLSFVNDKHIDMVISTQYNNTNKLKYMIINCNHIEVIESAKDVWKNIFKNDFSMLYEYFQNIRKSSNFIIEGTIYKSIISGYEKFMDDFIDLDDF >gi|343385745|ref|AEM21235.1| RfaF, ADP-heptose:LPS heptosyltransferase, 679259..680239 [Brachyspira intermedia PWS/A] MKDIKNLLIHSPNWLGDIIMSMPAIHLIKQRYKDIKITVMAKKSMLGIFAATDLIDDYLELKNFPKLRKYNFDAVLILPNSFESAFRVFGHGIKTRIGYKADYRDFMLTKAVDRKEVRWIHTSDYYVNLLKSIGINKKRPRIKLKIKEDILNKAKDYLKTVNPKNKKIFAYGIGATNSIGKIWREEYFAEVANYLSNKYDALTLFITTPNEKEISDKISAMLLKDPIIPYMSLDMIAAILSLCDGFIGNDSGAMHVASIVGIPTLALYFATPAYQNSPIGIKSKIIEKKPDNPACICGGKKCKLETFECREIIKPQEVIKKFESMI >gi|343385746|ref|AEM21236.1| hypothetical protein, complement(680247..681101) [Brachyspira intermedia PWS/A] MLSDILKHIGKCDKIYFFIKSSGGSGQASLRIVHLLRQSCKKVIALLPLEAASAATMLCLGADEIQMGPLAFITAVDTSLQHELSPVNKDNSLVYVSQDELARVIKLWKEQSNNNDNNPYEHIYKYIHPLVLGAVDRASSLSIKLCKDILSYHMKDQKLIDEISNSLNSAYPSHNYPITIREAKKLGLNVKEMDDKLNESLMSLNEYYSEMGQKSCTDYDEINYHDNEILNIHEGSGIQIYYQEDKDWHYRVEERRWIPMNDNSSWIKNTLINGKQNRSKFHIR >gi|343385747|ref|AEM21237.1| flagellar filament outer layer protein FlaA, 681437..682399 [Brachyspira intermedia PWS/A] MKKLFVVLTSIFIAASAYGLTNSTLIDFALTGNADNLQAGEGDTNEVVPVAENLYNDNWVVWLNESARLTENRRNSYVTNVDSKGNNGAWEAGKVLGIRVHFPLAAWNSYALVKPVFELEMYGGADGTKYTEGKGVIHNVGEIKSISSWVYGRNYLVSYFVNLQNEFGALKSYPMGTVYFNGWRQVRWENREYLPNVRDRVLVREPLYPRMIPSVKLDSLGFYRTKDTKGGDFITYVKDVTIEYDVVVVDFEEDIDDEATWQLLKTENDRKQAIEAARIREQAELRDLEQRRIGDGAAADQGTTTDTGAADTGAAQEQAQ >gi|343385748|ref|AEM21238.1| isochorismatase hydrolase, 682528..683091 [Brachyspira intermedia PWS/A] MRVMKQPLINKDDTLYICIDEQGKLTTAVYDAESVIKNTNMLFRVADMHNIPVLVTEQYPKGLGHTDERIKFPKNCKLFAKEYFSIFGAEDFVEEFNKINKKNIVIFGIETHVCVYYSVVHLLENGYNVYVVADACTSRTKENKEIALEQMRKLGANIVNTEMVIFGHIEHCKVPCFKDVSKLLKDN >gi|343385749|ref|AEM21239.1| triosephosphate isomerase, 683113..683874 [Brachyspira intermedia PWS/A] MARKKLIAGNWKMNNSNKEALELVNSLKGLVKDVKDRDIMIAPTFTCLSDVHNAIKGTNIKLGAQNLYFEEKGAFTGQISADMLLAVGCEYVIIGHSECRDIFGEKDELINKKVKRALDKNLIPVLCVGEHLEEREKGITSDIVSNQTKEAFKGLSEAEAKKVVIAYEPVWAIGTGKTATPQDADDVHKTIRETLKSLYNESVAEGMIILYGGSVNEKNADDLLNMPNIDGALVGGASLVADKFARIVNYVAK >gi|343385750|ref|AEM21240.1| hypothetical protein, 684122..685045 [Brachyspira intermedia PWS/A] MYFNIMDGTNVFGRYHYNNINQFIDIRGHINGNKLYIEEKVNNRITGYFNGIVSNDLFFSGEWVSKDGENKYDFSFYRDESYPVHTMDIVNSWLKLELDNGKKFESTKDAVIIRNEKNLNNLDRISLDVDGIKSLNTNRIAYILNNAIIDEYNVWTKSSQNNEDFHLIKEINVAYLDENIISFTIYNYSYTGGTHGIYNVVPAIYLISTGERIGLSLSELIENKNDRELINLMRSKLLRNFTEKDFFDFYSIELSEIYDVTPAGISFYWPLYKIADYAHGVIEIEFTYLELKPFIKKDSKFWYLFNK >gi|343385751|ref|AEM21241.1| endonuclease III, 685078..685779 [Brachyspira intermedia PWS/A] MNDNDIHPIMKELTKVTKEMPMPVVTEIKIITNRDAYKILISTMLSLRTKDPTTRDASMRLFEKAGNPKDMLKLSEEEIAKLIYPVGFYKVKAKNILEVSQMIIDDFNGQVPDEIDELLKLKGVGRKVANLVVTEAFDKDGICVDTHVHRISNRFGYVHTKTPEETEFALRDKLPKEYWRVYNDTLVVYGQNLCKPISPLCSKCTVSQYCDYFKNEYKDNKEKSKEKKSTNKK >gi|343385752|ref|AEM21242.1| protein of unknown function DUF6, transmembrane, complement(685783..686658) [Brachyspira intermedia PWS/A] MWGITFISTKILLRDFSPIEILFSRFLLGFALLFIIYPKNNKIYSKKEEMLFAVTGLSGITLYYLFENIALNYSLASNVGILVAIGPLFTGIFASIFLKEKLKLNFFVGFIFAIIGIAVITFNGKFILKINPIGDIFAILAAVMWGIYSVLVKKIADFGHNSVLITKKTFMYGIIFMIPVMLFMGFNVNINDYLKPINLINFLFLSFIACTLCFITWAYATKILGAVKTNTYIYFIPIITLITSKIVLDENITLFAIIGIIFILLGVIISQANISFKKMNKINTRKIMNNQ >gi|343385753|ref|AEM21243.1| hypothetical protein, complement(686726..686872) [Brachyspira intermedia PWS/A] MIKKIYCLLVLIMLLLSCADKKEADNKNSIKVMEDDEYIKNVIKDSSK >gi|343385754|ref|AEM21244.1| hypothetical protein, complement(686898..687119) [Brachyspira intermedia PWS/A] MILSYGFLEQENTNNNDTEIIKYNKIFFIFIVPLNYPNIMLINIILYLNILSNYFIDKVIIFYFFNYYTVYII >gi|343385755|ref|AEM21245.1| rhodanese domain protein, 687121..687426 [Brachyspira intermedia PWS/A] MKKALDLMSKSTNLVLLDVRTPEEYMGGSAPNSINIDVLNTDFKSKIDLLDKNKEYIVYCRSGNRSSIASSIMATNGFLHVYNLQNISYVDFVNAILTNRK >gi|343385756|ref|AEM21246.1| hypothetical protein, complement(687501..687929) [Brachyspira intermedia PWS/A] MINLEKEEILYKSIKKGVIYGKNIIKNSIKEYYINNDKNIILIIEKDINASIYNELYNILNRLLENHAKNIIIHFRINIKYIISNAIYLMLEVQKVLEFRGGNLILTGLNEYSKWSLKSLEAHKKVKIHDDIQNAIKEIKAS >gi|343385757|ref|AEM21247.1| hypothetical protein, complement(687895..688131) [Brachyspira intermedia PWS/A] MKINNTIYNMKKSRSIYSNRSAVIQNDEEIVLLLGNEMRKENTVDVDTTVYLSLPSFLRLYDTLKEKVDKFREGGNLI >gi|343385758|ref|AEM21248.1| hypothetical protein, 688505..689170 [Brachyspira intermedia PWS/A] MTPEKVVSMISNRFSTIKGFSANFVERNGERISYGNVITKNPNLFRMEYSSGGNGQSIYCNGETLWIIFPKNNVVAEQKLNYGDSGAIYTPEGIMRLTTKFNIDFYNERELVSLNSFKDSELGIAKYNSSYAANDNRRAYHMLLTSKQASVDRTGFTKIHLWVDNTGMIIRILGITTTNVPVEYLFTSIRYNPKYEDNNKDFEPEISENMQVLKDGLVPNN >gi|343385759|ref|AEM21249.1| hypothetical protein, 689185..690567 [Brachyspira intermedia PWS/A] METIGQILKNAREKKGLTIEELEATTHIVARFIKALENEEFDVLPGEIYVKGFIKNLSDKLSLDADMVLERYNLQKNGIKSEQDLLKSGKAIKNIKKNKEPVKEVKDNKDINDGKDNKEQEVNKEPVKDTNTKESLKDVINTEKHEEKTIKETNKKNKNTNTNNRAEADLLFMARRDLYKLRNKNKSIIPTVIIILAIIVVIAVIVFNWKNITGFIFPSNNKRQNRNEVEISKNIVDSKAKQSVKSGDIIYFKPLGISATIKFNSIGNVLHININGQDLSFSKSSPIILDLNGNGINDFKISVIEVYDNSATVEMEKLEENQMVNTGYTNDIESAAMNTTNYNNTVSTNLLVINGETYIEQDTEKVDIRIEITAKHFVYIRYFIDSNRPATTNLLSGKTLYLEAKDVVMLTIGNAGEVVVKVNGKIINVGAAGETVNKTIKWVKNLNDSTRYNLIMSDTK >gi|343385760|ref|AEM21250.1| MiaB, 2-methylthioadenine synthetase, 690637..691959 [Brachyspira intermedia PWS/A] MQNIYLHSLGCEKNTVDGEHILAILQKKGFNITNNPEDADIIVINTCAFIEDSKKESIDAIFDHSMYKKYGKCKRLIVSGCMSERYKENFLEMFKEVDSAIGIYDLENILKAVEEDGFHDAKENTEYKEYGDRVNTGTKYSVYIRISDGCHANCSFCAIPGIRGDHRSRKIEDIVKEAENYAKNGAKEINLIAQETTFYGYDIYNKLALPDLLKALSKVEGIQWIRVLYQNPVVLNDEIIESFFNTDKVVPYFDIPLQHVDKDILKDMNRGTRSYKFYREMIDKIRSYNNDAVIRTSLIVGFPGETPESFKKLIKFVRNAKLDRVGVFTYSEEENTKALLIDKPKLSRNRKLMLREKLMRAAIEVSEKRLERFIGRTIDVLIEKKEDENKFIGRSIYDAPEVDGYVEVYNENTNNNINIGDIVQVTVTHNTKYDLIGNVI >gi|343385761|ref|AEM21251.1| membrane-associated ATP-dependent Clp protease ATP-binding subunit, 691977..693815 [Brachyspira intermedia PWS/A] MKKKKQENEPSSIEKEEKKSSYANREDAFRAYFEIVTKIVYTLNLISDRNDMTRRLSSNIDRALGYDDEMMSNNEKIANNSNEVEILINSLKTDVRKISTFKKYNFNIERFISDKNLDLDERFILYSVLVYTIYGDSMSAISVRRILELITLNNDIYINKYHYFDNNSKLISSGIFNLSHEPYPSSGILEITNTLITFISSKVIFAFLEKDNYNVIESIISSGEAIKKISLENKIGGKRKSSESDILTPKEIVAQLDKTVIGQDEAKKALAVHAYLHCLRINGNKDIPFRSNILMIGPTGVGKTYLVKTLADILGLPFARADVTTLTETGYVGDDVEVVLYNLYRKANGDLEKAQHGIVFLDEVDKIAKADAHQSTTGNPSDKAVQEALLSMMNGEDIRVPEFGDRRMMHSSDGILMNTKNILFIFGGAFVGLDDIIKMRLKGESSLGFGSNAVINKLQKNRILSQVDVKDIEKYGMIPEFIGRIPIIVTLNDLTKENLKDILTKTSESPIIKYTEFFKSIGKKLVVTAEAINFIVDKASSMNMGARSLKSIVETAMVNILFNLDGVKGNTLTLTKYDIENAFSEKEFVNSGNEDKKTDNSNKNFSKESFMA >gi|343385762|ref|AEM21252.1| RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24, 693812..694471 [Brachyspira intermedia PWS/A] MILLYVCLFVINNVYINYLRTGNILEFVEMIVTKEKELLKDYELIEAHKKGDSEALDILLTRYKNYIFNLSYRFMHNYEDAMDLTQDVLIRVYKAIDRYEERNYFKGWLYRIISNTAINMYSKAYRRESPYLEKLEIVDDKRYNTEKEYERIYLQEKIYNASTKLKGKQRDVFILRYYENYSYKEISDILNISSDSAKSNYSYALKKMKSLLEKERTLL >gi|343385763|ref|AEM21253.1| hypothetical protein, 694540..694797 [Brachyspira intermedia PWS/A] MPDREWQYMLQRAKMESIKENEISPLYAFMTSARLSIALSTAIVLVLALSLFYGNPNKEDSHNTNTASSSKTNINVVNVANSSFI >gi|343385764|ref|AEM21254.1| hemolysin B ATP-binding subunit, 694966..697452 [Brachyspira intermedia PWS/A] MFQFHLTSKAKKVIELYAQEEAKRLNHDMVTPEHILLGLLHESEALATRVLLRLKIDLDRLKLELESAMVKSSTTKVFGTLPTAPRVQKLISRSAEEARALSHNYIGTEHLLLGLLREESGTAYNVLTSMGLELTILRQEILKMLGVAGSNISSMEQTTQEDNVKKVKTPTLDQFARDLTKMARDKALDRVIGRENEVMRVVQILSRRKKNNPILLGEPGVGKTAIVEGLAEKIVAADVPDILLKKRVLTLDLSSVVAGTKYRGEFEERIKNIVLEIKKASNIIIFIDELHTLIGAGGAEGALDAANMLKPALSRGEIQCIGATTINEYKKYIEKDGALVRRFQPINVEEPSIEDTIEILNGIKGKYEEHHKVKYTDEAVNAAAVLSKRYIFERHLPDKAIDLIDEAGSRARLLNMTRPQEFKDLDKKIEELNQQKKNAVDNQNFEDAAKIRDEISSIQEELAKKEEKWREEREKIETFIEEDDIRHVISEITNIPIKRLLNSESKRLIGMEEELHQKVVGQKEAISSISKAIRRSRAGLKTSKRPLGSFIFLGPTGVGKTALAKVLSEFMFGDSDALIRIDMSEFMEKFAVSRLIGAPPGYVGYEEGGGLTEKVRRKPYSLILFDEIEKAHPDVTNILLQVLEEGQLTDNFGRKVDFSNTIIIITSNLGARDIIKGSSLGFNAVGSEKDANDIKNFALEELKQNFNPEFLNRIDDIIVFHTLSKEDLKDIINIMLKELNEAIKERNIVINLSEEAKNYIIDKGFDKKYGARSLRRAIQKEIEDYVSTEILFGNIEDGDTINVDANDGSLIFSYEKSTKTENKELSKS >gi|343385765|ref|AEM21255.1| hypothetical protein, complement(697546..698109) [Brachyspira intermedia PWS/A] MRIYICFIISITFIISCQTNQVYNIKNDDDKSHFVKINRIEYLKPNIKYNINGTLYSTDKQSRIYKVIRKDNLILSNAKRNNYAQRKVVELYGIKNHDQGGHIIGRQFGGSPNIDNIIPINKKLNIGEMKNTEMEWRESIIKGYEINDIIIDISYIYTNTRPYIITIDYNIEKDFTNYRIKKVFTND >gi|343385766|ref|AEM21256.1| hypothetical protein, complement(698520..700319) [Brachyspira intermedia PWS/A] MMKIKKIMATIALLSFTWSILPAQTYEDAARITQEADDLQNQGQYQQSYDKSQEASLSIDKAQMALFYRLMNARINKTKNDANNAITEINQMGAATDNQFKTQYEEAVKYFEEGNANIGSIPGPDTVAQTDEEFNTASNTFNTVLEYYNNALSSANSVKEGYLGRERDTASKAIADARGKYNAALGKSIKAGDNNDKTVSGALTKADEALKADNFASVQQNVAAALAGITKAEADAKAAAERAAAAAKAKAEAEAKAKAAAEAKAKAAAEAKAKAEAEAKAKAAAEAKKKAEEEARKKAEQEALAKEKADAIAKAKQDIANAQQKYDGLVNDNTITRGDEADQNISTLLADANNVVETDPAAASQKALEASKAMDDLVTERDNTIAREENQRQLDDLKARYQQLVDEGYIIPDSEEDQNLSQILKDAEDALANNDNTLAREKLEEANRTMNAIYEMGPKRPVDGDLVDTDNNNNETGQIIDATTGQTVNTEGKVTVLPMYYTVVQRTPLTDALWRIAGYSFIYNDPIQWYRLYQANRNVLRDPNNPDLILPGQVLTIPSMNGEERAGTYDPNMEYITYDEAMILRNQQQNNAGTTQTNN >gi|343385767|ref|AEM21257.1| hypothetical protein, complement(700336..700944) [Brachyspira intermedia PWS/A] MQIGFITLIAFMLISCGGLPTKEYERVTALRDTVVNKYPEIQTFAQEDFDIAEKGYAEADIIMKEENKDEAEKAKELLLAAETNYNLVLDKGLPPYSEILKKQTDESATNAIDIKAGVMYADEFAKADTVYQEANAMYTAETKDYRVMVDKLYQAKVAYTDLYNKTKEQFDKSDEALKLVKERLAQLEKMMQEIEAFEQEQN >gi|343385768|ref|AEM21258.1| glutamate synthase (DPH), complement(701232..702590) [Brachyspira intermedia PWS/A] MPARSPEERRKDFKEVPLGYTEEQAYQESLRCLDCKVPHCMEGCPAKVKIPEFIGLIAEKKFLEAAKKIKETNALPAACGRVCPQEEQCEQRCVVGKKFEPVAIGKLEMFVADYERKHAQHEDLKVEKNGKKVCIIGAGPAGLACAGDLIKLGYDVTVLEALHTIGGVLMYGIPEFRLPKELVAHEVENLKKDGVNFRINEVAGISLDFNELRKEYDAIFLGTGAGLPAFLNVPGEHLCGVYSANEYLTRVNLMGAYKFPEVDTPIIKHKRVAVLGGGNVAMDACRTAVRLGAEKVYIIYRRTEKELPARLEEIHHAMEEGVDFRFLRAPLEILGDENDNVIGVRTQVMELGEADADGRRKPVAVEGQTEDIEVDAVIVAIGTTPNPLIARKVPELETTKKGTYVINEETGATSMEGVFAGGDAARGAATVILAIGDGKRAAAGIDKYLSNK >gi|343385769|ref|AEM21259.1| N-acetylneuraminate lyase, complement(702898..703812) [Brachyspira intermedia PWS/A] MRNLDKYKGIIPAFYACYDEKGEISPERVKKFTQHLIDKGVNGLYVGGSSGECIYHSKEERKLVLENVMEVAKGKITIIAHVGCNNTADSAELAAHAEKLGVDAIASIPPIYFHLPDYAIADYWNDISAAAPNTDFIIYNIPQLAGVALNVNLYKKMRENPRVIGVKNSSMPVQDIQMFKDVGGDDSIIFNGPDEQFVAGRLIGADAGIGGTYAVMPELFLAANDAVNKCQFDKARDIQYKIDRIIYAMCECHGNLYAVMKAILKLKGLELGGVRKPLSNIIDDDKAKIEKCAKMIDDAINSIK >gi|343385770|ref|AEM21260.1| 50S ribosomal protein L28, 704234..704425 [Brachyspira intermedia PWS/A] MARVCEICGKGKQNGHSVSHSNIKTKRSFNANLQNVKIEVNGSVKKALVCTKCIKGNKISKAK >gi|343385771|ref|AEM21261.1| hydroxymethylbutenyl pyrophosphate reductase, 704456..706201 [Brachyspira intermedia PWS/A] MNVDIGKFAGFCDGVKYAVENTFSQASKKNSEIYIDGHLIHNPQTLDMLENVGVKTYEDDEDMSILDGKTVIVRAHGISPKRREALSSHAKKIVNLTCKYVAKIQGLVKKYSSLGYRVIVIGNPVHPEIVGVCGYADDVYVVYKDEDLNKLPNDSKKALIVAQTTLQKSTFDKYVNQIQDKYKDTEIIIKNTICAATEQRQNEVLEIAKRNDVVLVIGGSESSNTRNLYNIAAAIKPAFYVEYKEDLDNIDLSNYKNVGIMAGASTPDWLIEDIAQTIKDKYASNFVRFMSRIFDFLNYGYIFFSVGAFLMSYAIYDILSQPFQYQIGIIISLYYLYMSLENGYSNYTIRISDKRRYLFYQEYKIFFRFLILMSAILMFYFAYKINVGILMLSILSSLLGMGYNISFENKSRFESSFFFRLFKKLIPFKAIVISVAVTVLLNGSIFIMHRDVLKEKPFLYFFSTCIVFLFMFIRQALIEIKFSQSDKIAGAVTLTTYIDSNKLAFITGIIPIILALFMLVGIIIGKFPLEINKLKYCVPIIYSSIISFVVMKKKIITSRHLFSILIDSPLYILFLAALINI >gi|343385772|ref|AEM21262.1| hypothetical protein, complement(706278..707066) [Brachyspira intermedia PWS/A] MATKKTEKAVEKTTAKKSATTKKAAEEKEESTPKKAAVKSAAAKKTTTASAKKTTAKKAQPKKKSEKEIEEEIEEIKEEAKKDEYIPDEVDIVRELPDRYKETKLVLMMRDPEWCFFYWDISDEDINYHSLKGKRISVRIFHVFGYDITNGEIHKEIEVNYIYGDRYVNLAMPHAYFIGELGYYDENNRFIVLARSNMIYAPRDSMSNVYDEEWMVNEEIIKLLKSPKALRESLSSATIFELIDLRRNHLAASSSSLFMKKN >gi|343385773|ref|AEM21263.1| TPR domain-containing protein, 707228..707761 [Brachyspira intermedia PWS/A] MNKIIICLLFICNVIAFSQQDFSVPITPSKDQELDRIAGYSTTLSEFDGSMNAYTKLKAYINVLDSKGMAALKQHPSYPKLGDVYMYGAIYLTKDFKEDKIIELYKKALNLRADPNSNYQLATIYKKKFDDAVKKNDTQKEQEYGKNVYEYLNKYIVLSGDNSKKYKEILEYFSAYK >gi|343385774|ref|AEM21264.1| AarF, Predicted unusual protein kinase, complement(707956..709635) [Brachyspira intermedia PWS/A] MNNIKSINRAREIISIIIAYGFRDIIAITPILKIIKNPIDKINIKYNGVDLRKYSRAERIKMACEELGTTFIKLGQILSNRNDILPKDITEELSKLQNHVKPFDENIAKSIIETELGAKIEDIFESFELTPKASASISQVHTGVLKNGEKVAIKVKRPNIEENILTDIEIIVWLSNIIEKYNEEFALMQPQKLIAAFKSQLIQELDFNFEKNNTLKFAKFFKNNKNIKIAKVYDEYSTKNILTMEYIEGIKISDIAEDDTRYDRKKLVSIGIDAVLEQIFMLGFFHADPHPGNLMALENNVLCFLDFGMIGFIPPNSKDAFSSLIMSISSADYLELSKSILDLCYHGEISNIDEFNMAIFILVSKYVDMPLDNINIEDVFNELIGIIREFRLTLPSNIMLLIKSLIVLEGVARNLDKEVKLIEHIKPFALRYVKEQMKPDNLFRQFKKLFYDYSYIIKEFPSDLEHLVSVIKQGSVKIQLEHKKLESLASTLDGLADRLSYSIVLASLILASALIITSKMPPLFHGTSVIGMIGFALSAIMGFIMIISRFIKKYVKKNN >gi|343385775|ref|AEM21265.1| conserved hypothetical protein, complement(709743..710054) [Brachyspira intermedia PWS/A] MSLSDDIKSGFYSSIGMMLKGKEKLEEAAREFIKDKNVSAEEGEKFVKEMVNKANETKEDVSQFIDERVKKVVDKMGYVKKEEYDAMRKELDELKQSIKKDEQ >gi|343385776|ref|AEM21266.1| hypothetical protein, complement(710448..710663) [Brachyspira intermedia PWS/A] MDSDGVYKRVNINKVIKNIQKNNNDITESKAQEIAYIMIKELNKKVSAMVNDFENGEGDFMACYFDAIDKQ >gi|343385777|ref|AEM21267.1| TM2 domain containing protein, complement(710681..711454) [Brachyspira intermedia PWS/A] MRKRIKAIICSALSLIFGGIGIQKFYLGQTKRGILYVLFFWTGIPYLLCVVDLIRFIFMTEKEFNLIYNKDYIENINYKNDYENYKSKFDDAIDAEYSYVDENSDDNKNEEKNYNNQENTEENIINKALEYHKLINDTIISIKDYNFSAKVKQLNQLFKSIIDKSSGYKRNEIAIKNLDKMLEYNIPTTLKLINSYIDLSSSNTSDLNNVKKDIIESVESVTIYLNKVLENIQKDDIIDITSDINVLKAGLKKDGYV >gi|343385778|ref|AEM21268.1| hypothetical protein, 711608..712330 [Brachyspira intermedia PWS/A] MQTTTLWDYPSQQYLKSEEEKHKHYIGATPSYIIWNLLNRYTKEKDLVVDPMAGSGTTIDVARELGRRALGYDINPKALQRKDVFKADARKIPIEDEKVDFVFIDPPYSTHINYSDEKNCIGKLTARENEYYEAMEKVINEIFRIMKKDRYMALYVSDSYEKGFPFMPIGFKLFEIMSKYFMPIDIVSVVRHNKTLNKGNYHMAAAENNFYLRGFNYLFIMYKKGNKTIDINGKVHLRNL >gi|343385779|ref|AEM21269.1| hypothetical protein, complement(712400..716497) [Brachyspira intermedia PWS/A] MPKIEDLERLGSIAFLIGNKALPKEISQNDYDRFKSVFTDEHMASSMPAEDNGLPSIDDLDSLDGLDFQDNSDNNTSDDIDNLQLPEDFDNPLSDDPDDLGLPEDLDNDKLSDDIDDLGLPEDLGNDKVSDDVDDLGLPEDLDNDKVSDDVDNLELPEDLDNDKVSADIDNLELPEDLDNDKVSADIDNLELPEDLDNDKVSADIDNLELPENLDNDKVSADIDNLEFPEDLDNDKVSADIDNLELPEDLDNDKVSADIDNLDLPEDLDNDKVSADIDNLELPEDLDNDKVSADIDDLGLPEDLDNDKVSADIDDLGLPEDLDNDKVSADIDDLGLPEDLDNDLVSNDLDDLGLPEDHDLGLPEDLDDDKVSANIDDLELPEDKELEDKIAMDINNDNSNKNDIHSEKLPVLDDLPLPDTLPNIDEGREYEYNEDLPNIESNDDQKSNINDLELDDISDSLDDILEDEDSNLDDILSDDELDEEDKNEVKEEAKAEEPQDDIDLDDLSLDSIMDEDKEEEPKDEVDEVKEETKTEEPQDDIDLDDLSLDSIMDEDKEGEPKDEVNEVKEEAKAEEPQDDIDLDDLSLDSIMDEDKKEEPKDEVNEVKEETKTEEPHDNMDLDDLSLDSILDEDKEEEPKDEVAEVKEETKAEEPHDDINLDDLSLDDAIEEYEQSPKDDLDLDDVIEDIDDKNENKNISNNIVEGSTTLPSPDTANNLPASKYEDVDKDVDHDKVINAIKYLPPLTQYHVLDAILNEKLDRISMEALLNALERGESNENITELLNKELGLSIKEEGSKNVLELIPIPNSLKDYAKIIRVAAVFLILFVAVVILSFQFIYKPVMANKYYNQGLVSISKGAYDDAERNFSEGERLKPKQIKWYNKYARAYIDRETFSYALKKIQGALDIKPRDFETRITFGYYYRKKGEKELSVEDYTLGEELYNDMLVYTDKKKEKETIYDERGLLMISRARTLVEPNYYDIAYNNYRDMINFFGDGVVPRKRAMLIKIYQDNYEQVKALQNHINLLKKDYIDDEVYPKLAKYLLDKDDFYGSRILFENLLTAYPNNLESIVGYADYEARLKHYDRAMEILNTAALPLYESNPFYRGKEFVYNMLGQIYYNLGEYGNAVKNFTEALAINSVYPDANYNLANVYFYREKDYEKAKQHYQTAYDNLAPNLRSDKLLYNLSWIYYSDGEYDRAFEGFNALFQKNPSNSVVSYALGNSLLHLDKANLANGFYRNALSQVLSKRDRLGRLEMRTESDFILVSYLASLYNNIGVSYAYNSTITNTIVNEQQAFKYFVLASEYFDQIRTSNIDLERMEKRTILVDNQNIGAATYNIMSVQGKRNLKQATVIDDYIPKDMYYVR >gi|343385780|ref|AEM21270.1| F0F1 ATP synthase subunit epsilon, complement(716603..717031) [Brachyspira intermedia PWS/A] MATTTAVKKNKKALTCSVITRSGPILRSIRIDHVEIPSHDGYVSIHLDHCPYIVRIGYGELKIYNEDNKLINMYVEDGIAEVTNNVIGILVETALYPKDIDAAMLKDEINKLSTQMVINAEEARRNHEKIAKLNKQIEISSK >gi|343385781|ref|AEM21271.1| hypothetical protein, complement(717047..717352) [Brachyspira intermedia PWS/A] MSWLNVILTVLSSANMVGDLVKTTTMESRTKKLYSKLDEKEKEIIEKVESKTKKEFQYIYSEINSLKIVVRFLFFISLILLILFIISLIFIIFVLKYKNVI >gi|343385782|ref|AEM21272.1| FcbC, Predicted thioesterase, complement(717356..717769) [Brachyspira intermedia PWS/A] MAHVNKTEIRVIYADTDQMGVVYHSNYLRYFEIGRTELLRELGISYKDMEEKYDIMLPVKEAFVDYKISIRYDDVIVVYTSVEKLKNVSLKLKYEIRSKEDEKILYSTGYTLHPFVNKKGQIVKPDEYLYNIMAKGK >gi|343385783|ref|AEM21273.1| phosphopantetheine adenylyltransferase, 717954..718442 [Brachyspira intermedia PWS/A] MKNGKVIFPGTFDPFTLGHLDVLYRLADIFNKVYISVAVNLDKSPTFSIEERKNMIKKVIGDNDTIEIVTISGLVTEYMKQNDIKVLARGIRDSEDLYYELRMSRMNKLLYPEMDTIFLHTSEHYAYVSSSLIKEILKFNGPIDGLVPEIIVEDIKSKFIKK >gi|343385784|ref|AEM21274.1| MiaB, 2-methylthioadenine synthetase, 718495..719769 [Brachyspira intermedia PWS/A] MNKADSNSLINSLMQEGFIQTENHENADNIIINTCSVRAHAEERVFSRVKLFNANRKKNKKDTKIIIMGCMAQTSKEHLEKLGVDKIFDVYNEVNIIDYLKDEEVFVRKFNDNYIFNKSYVDEDKPHKAFIPISHGCNNWCTYCIVPHTRGKMVSRKSGEIIEELKRLIDDGAKEITLLGQNVNSYGLDIDNEINFTELLYKLDKVIDEKAKDKVWIRFLTSHPKDFDKDLADAIWNLNSLCKHIHLPFQSGSDRILNLMNRKYTKDEYVKKVSYLRDYADDFPISTDIIVGYADETEDEYQETLNLLESIGFEEAYLYKYSEREGSIAYKKNIQYDKVAGARRLTNLVNYQRELAQKLLSKQVGKKTSVMVDDIAKDNMHYLCRSKENRIILVKKEKELNMGDIFNAEVTEIKSHTLIGKFID >gi|343385785|ref|AEM21275.1| putative phosphopantetheinyl transferase, 719791..720402 [Brachyspira intermedia PWS/A] MTYLEYSFNDNENRAEARKNLENLILSMSENHYNKNNLIIEREENKKPYFKNENSLYFNGTHTSELFAATMSDEYNVGIDAEKIRERDYFSIAEEYFYKSEIEYLKNTHKLEIDFFTIWTIKEAYIKMLGKTIFDIKNSIEVDLIEREVRNADDIFFASFILDDSYIISVCFDTKNEVDLNVQDFNLNMLFAYPTLPNININM >gi|343385786|ref|AEM21276.1| hypothetical protein, 720495..721496 [Brachyspira intermedia PWS/A] MLNRIFLSAILFALSFSNILLSQDISFKVTGISGVAFIEKPDINKSLRAFRGSEVHKEYRLRTSVDSQVDLTLSRRGDKIGSIVVPQNTIILVNEPISKESGKVSLSLLEGYIKVNINKNAGAMVEVHTSTTTSVVRGTSFEVAFAEDGSTIVVLDDGVVDVVTDKDKEVLNPKKAYINTINDQSKIINQSSDSDPIVFLNKGEEASREDYISTIENLMTAMEGISDVNNNNDNFVSLVNAEEGESKINDMEMKHYRMIAANEGYYNTIIKLINLYPDKRNELIQYARKSLALYTANQKAISKMNSAVTRTREKFDRIKKKFDERMMTTSASQ >gi|343385787|ref|AEM21277.1| hypothetical protein, complement(721502..722971) [Brachyspira intermedia PWS/A] MSKKILEKIKELHSQNKHQKIIELIYSIDEEERDYEIILFFARALNNVQNYDEALDNLMYIREEGLFDPLWYYRTGYAYYHKNEKNTAKQYFSKAIELFENHDKKNIENFEEISNNIKNLYSLCFENEDKELSFVQRVKLFWKWFEDNEKEIDDIIKYKNKDIIHFLSSAAKIISDNLAFNIGRNYNFTFNIDGKNYLFYLTPRIISDMPEKLKEKWTFMPYIPSSNGVNFTIEIHNKRIEAQDVFVKIEFDDENDKFDLVFYNKDLNDLDKEEAYNIFFLIMENSIGEGLSRVYIRYADISNRKLNNMLPLIELEKYIKKTLTFHRKKIITNPINQYLAYTSEPKQSNTLRYDIIAGTTSYYETINDYYNENTDDIIEISKCGARAIFLYYTYDYKNDDDESRKEILNERYEIQERLEKEVLASEDKEADIGIVLGGAMGVYNIYIDLIVYDENEFIKRAKILLAEYERDFYISKLRKNSDIKNIFDL >gi|343385788|ref|AEM21278.1| 50S ribosomal protein L21, 723187..723459 [Brachyspira intermedia PWS/A] MEKGQDILVEYLGDDAKEAPEIKTLLLKKDDESVLVGTPYVDGVKVSSKIVEMMKGDKVVIGKHKRRKDYRRKTGHRHKYHKITIEDIAV >gi|343385789|ref|AEM21279.1| hypothetical protein, 723459..723815 [Brachyspira intermedia PWS/A] MSSFVNVVYNIESIIQSITVEGHAGIKKSGEGYEVCIALSALTQAMYKALLSIVGNRFLKYKINDGFLSLELVNCDKLENYKKVEYKIVSNGYLIGIKSLIKEYPDFIKYKEEYKNGT >gi|343385790|ref|AEM21280.1| 50S ribosomal protein L27, 723805..724059 [Brachyspira intermedia PWS/A] MAHKKGGGSSKNGRDSQSKRLGVKVYGGQKVISGNIIVRQRGTQFHAGRNVDIGRDHTIFATASGYVKFHTNKFGKKTISVVTE >gi|343385791|ref|AEM21281.1| hypothetical protein, complement(724233..724943) [Brachyspira intermedia PWS/A] MSKRLKTIINIFAIILIVISVNIIASSFLMMIFYNRKNLFYITNIIALLIIINSIMLIFKKNYKVFIIVFISILSFSFIFTFANYIKYANNVKIIKKDKEVPNSLDRALAKDRFFKAAEKGNIEKIKELMDYVDINTKDAYGINALMHALIFNNLESVEFLLKNGADVNSMDYQYQTPLMYAVQKNNAEIVKLLISKGADINFKDARNITALDIAKSKGYDDIAEILENAKKYIKK >gi|343385792|ref|AEM21282.1| hypothetical protein, complement(724968..725957) [Brachyspira intermedia PWS/A] MKNKYRPYFEIKDTTFIILKDKINNIYIYCNKFENIDEGIHYLYRGKIFINNSDLFGIYEIRGNSSKIEVFDYYTEDEFIRSKIKNIAEINLNNSSISKAEYAMEINSKKIEGVFELINEPKINIKKFNIYKFGYLKKYGELSVILSYLFNFYYAFIDNKEKINFDINGESSFSKDFQYKKENELSDEINSFLKKFPVYELRKYFIKIKDLYAFNILYFDEKTICIYKKLIKIEDSKEITINNVFLIYDLNSQKLVTSYLKDLVNDAEKLLKECNAPSDFYSNIDNLIFGVTDSFIIIMKEKGYEKIFIDNKNIKEYVNNDHYLAYLFN >gi|343385793|ref|AEM21283.1| hypothetical protein, complement(726138..727421) [Brachyspira intermedia PWS/A] MKNLIGKSFIDKDIIILLAVVILVAAVIIIINIPKNKAKKNPVRFYKNNFFMLKDKVNNIYVYVYEHKKNDNYNDLYLPKDNVFPYLGRVYINNDNGFIINDVYFSSERIGVDNYYDKDNPILINKHSSDGNKSYGYDPETFAEIKFKTKLDDTSKSKIEYVIEFKPYDSIVDYVGDNMKKTLREPVKIEGTFEIIREDEAEIIRLHNTDILGLYNDKSILFSSERIFSLNVFNFDYLFINGKEKINSSINGVREFSDEFLKNKINENKDIVASYVKESKNRHWKSLMDESILNYIDNYADYYNELKEFKSFNILYYDDKTISLYKRVSKLEDLQIAEVNNMFMTFELSSQKLISPYLKDLVNDTEALLKKYNATSDFYSNIDNLIFGVTDSFIIIMKEKGYGKIFIDNNNIKDYINKEHYLAYLFN >gi|343385794|ref|AEM21284.1| hypothetical protein, complement(727728..729146) [Brachyspira intermedia PWS/A] MISFGILEPLRIFIISDYFWPIIFGVPAILLAVIFILEKRAKKWYAENKILVYEKSFFMLKDRINNIYINCYKYKDNDYDEWYRKHRGKIKYLIKVKFDNFAHEYFASFTGQMFINSENKLMIRETNELNNNEINVYRDYDMDYFERLKEKQFKSYLPYETSWKESIKFNKWSSKKEIREILLKIKFKSEFDYERTSEIEYTMDIKGGKVEGVFEVIRKPEMEIREFYIPVEQTTFTNDKYSAYLGMDEVRKMLTNYLFNFNYPFIRGKEKINSAISKAYYFDENFKEEKGRELEKEFNNKEVIIEKFHHYDQNKAYYADKIGIIYYKKLKDFRCFDILYYDDELICIYKRTVEADERRDEAAVKNHSFIFELSGEKSINSYLRDLVVDSKELLSKYVVPDYFYDNIDDLIFLLTDTGIIVMPEYTNLILSDEDYDLENTNEKIASRIFISSNDLKNYLNRSHSLFNFFDRQ >gi|343385795|ref|AEM21285.1| hypothetical protein, complement(729564..730892) [Brachyspira intermedia PWS/A] MYIKRRSKKWYSQNKIIVDGKDFFMLKDKINNIYINCYRYKDNAYAKWFNDHHSKMEDILTLSNNWAEDERKRQFDGFANEYFDRFPSQIFINNGYELIIREASKLYIDEMVVYHDYDKKYFKDLYYRQYKIETPFQYYEFNPNDKPKFEGWYSKEDVRDKLTTITFRKELDYERTSKIEYTMDIENKRIEGVFEVIRKPEIEVKQFYIPIEQMSFPDQLSYKYDGLGVDETKKMLTNYLFNFNYPFIRGKEKINMAISGAYNFDERFKQEKGKELEEKLNHKNALFDIFCPLDDIGLIYYRKFKDFRCLDISYYDDEVICVYKRTIEADAGNKEAIVKNNSLIFELDSERSISSYLRDLVVDSKELLSNYELTDNFYNNMRKLIFLLTDTGIIVMPEYPDLDINDSADEYEEIAERIFIPTEHLKNYLNKSHYLFNFFSRR >gi|343385796|ref|AEM21286.1| hypothetical protein, complement(731473..731790) [Brachyspira intermedia PWS/A] MSADETYMKSFLIIVGYDGIEINYPNDESTIEVVKKCVDIVMESDRAIKGDIGNSKLSKVANNHYKTISKNDAHLEFKFTSEGLEMSVYNGTQQVNSISLSKLGK >gi|343385797|ref|AEM21287.1| hypothetical protein, complement(732305..734179) [Brachyspira intermedia PWS/A] MLKNKNIFRIIISFIFLIITSLFLYSQEYDTNYYKNLFDKMFTNEDELKEMAKDPKEYIENLFKEAAEKVLKEKIEFYKKYNVIEIDSLEYEYQNAAEGYGDLEAVKKFIQKYDINGVYDGYTLLYTYSKYNGKLDIVEFLLENNADVYQKSINGKTALYSAVDDYAYDVVEIILKHYKNDDDINDEFLLAVNKENEFILKSLLKKKFLFFGNKFKMDLDKGLEIALDKGNEDIAAILVLNGAKTDNFLYYFKLVFGKYLILTAILIAIIIIFIKAYKRRYIPDIYQKTITFITFKDKVNNMYIYSYVYYGGLVSAMQGFFGNIFINNDKIKGYYNILSNFMDNYISIYCFDDNKQNDKEYFSWYDIIIERNEKAIIKFDCSLYDFINSDKKEINYIVEISDSKIINGVFEVNSNPDIKVEYFKLIFKKMAKSNHLINILRYLFDLYHFNIKNNDKINSYINGDNKLHSQKQNELKIDVEKILKKHDKVLFNDIKTKYYDKLKDFYNADNIVYFDDKTICVYKRFAKIESNNNLIINNISLIIDLDNEKLISPYLKDFVNNADEILKRYNVPKNFYNDTDNLIFLITEAGIILMKDKGHKKIFIPLDDIKYNINKDHYLSYLFD >gi|343385798|ref|AEM21288.1| hypothetical protein, complement(734260..734814) [Brachyspira intermedia PWS/A] MKKIFIILFMIFAVSFINENYAQNGTKKVNISFDYTKRPGYSSNQIAVWAEDNNGNYIATIYITDFTGRREGWTYRKQSLNNWQKKANAQSIDKKIIDAVSKSTPKQGKVNIVWDCKDNQGNIVKDGTYRIVVEATIYQDNNVLYTSVINIGNQANSQKASAKYSKPEAQKIDIIKNVNVSFMP >gi|343385799|ref|AEM21289.1| DPH oxidoreductase 1, D(P)H, complement(735223..735732) [Brachyspira intermedia PWS/A] MSEDILFTRRSIRKYIKGKQVEDEKIEYMLKAAMYAPSANNRRNWEFIVVKNRETLDKIMNSHPYAKMLDTATLAIVVCGDLSDESGQLYWQQNCSAALQNLMLAAKAKDLGSVWIGVAPREERMNEIIKIFNLPDHIKPLGIVVIGYPDGEPAMPDRFEPNKIHYEKY >gi|343385800|ref|AEM21290.1| adenine-specific methyltransferase, 736502..737044 [Brachyspira intermedia PWS/A] MCKYSFSLWCIFERYKKTASKTFNYCPCEFVISDIEHKVYNEDANKLIEDIETDILYLDPPYNRRQYSDNYHILETIAKYDNPVIKGKTGLRNDRIKSLYCNKNYVYNVFEELINKANAKYIFLSYNNEGLLSLEDIKKIMSKKGKYGLFVKEYSRFKADSKRYNSASKTCEYLHYLIVK >gi|343385801|ref|AEM21291.1| hypothetical protein, 737166..737702 [Brachyspira intermedia PWS/A] MARDEDDFIFQKLRQNIQRNFPREDDVNNYNQNNYKNDSYSNKDSLTILETERNIYKITDFSQKIDDPELTPALKEMIGILKEMVSYSKANKEGEKKLEKINEYHLPTAIKMLNSYIDFCNFPVKNENMQKTAQEIEDVIIKLNEALKKMLVEMNQNKLMDINSDIDVLKNMLDKDGY >gi|343385802|ref|AEM21292.1| toxic anion resistance family protein, 737731..739194 [Brachyspira intermedia PWS/A] MENNNLENNQQPNNIQDQNIVNAQPMQQNAMPNNIQGQNIVNAQPVQQNVMPNNMQGQNIVNAQPVQQNVMPNNIQGQNIINVQPVQPNVMPNNMQGQNFVNVQPVQQNAMPVNMQGQNFVNTQNYQPQNSAQQVFNDMNSVSNGQFTPEDIAKINQLSNSINLQDSVSIMSYGSAAQNKMIQFSENTLSNVMNKDLGEVGEAITDVITELKGFDIENETKGKGLFGFFKKAANNITKLKAKYTSVEANIDSIVKNLEAHQRNLLKDISILDQMYNYNLEYLKELEIYIEAGKQKLNHLMANEIPALESKAIASNTAEDAQLARDFKDLANRFEKRIHDLELTKTISIQTIPQIRLVQNNNVIMTEKIQSTITNTIPLWKNQMVLAIGLHHSNEAAKAQRAVTDTTNELLRKNADMLKTSTIETARESERGIVDIETLKHTNQQLISTLDEVMKIQTEGREKRRAAELELRNIENELKTKILNVSRE >gi|343385803|ref|AEM21293.1| Na+-dependent transporter of the SNF family, complement(739276..740664) [Brachyspira intermedia PWS/A] MHDNNREKLSSRLGFLLVSAGCAIGLGNVWRFPYITGKYGGALFVLLYLISLVILGLPILVMEFSVGRAGKRDLAGSYRALQKPGYKWHIIGYIQIFGCVLLMMFYTTVAGWCLSYCYFMAAGKLQGLNPQQVGEFFGSVLASPSTLILWMTVTVIIATFVCMMGLENGVEKVTKVMMTLLLLVLLVLIIRAVTLPNAKEGLKFYLLPDTNKMFSGGLKGFFSVAYAAIGQSFFTLSLGIGAMTIFGSYIDKNYSLTGESIMVMGLDTLIAFLSGLVIFPTTFSFGINPGEGAGLVFLTLPNIFNSMVLGRLWGALFFLFLSMAALTTIIAVFENLIAFTMSETKMPRKKTTIIVSITIFILSLPTALGFNLLSFIKPLGEGSTIADGLDFLVSNNFLPIGGIIILIFCTREFGWGWGNFIKEADTGKGIKFPQWARFYVSYILPFIVLAIFVIDYINRFFI >gi|343385804|ref|AEM21294.1| hypothetical protein, complement(740717..741277) [Brachyspira intermedia PWS/A] MLKKINIFFILLLVALNAYGAIVISTYKKPREIKYKYKMTERGKVLIVPKNILFQFNSGELDLNKYLKTVKYVGDVSTSTNIMMIIIEGHISTNEYKKTTNGYDRKDILFLYNRKNIDELSYKRSYNVYLAVTNGIVSKLTNYGLQDLLSEYKKIEENRRVEFILIENTNDMNVYTNYINNLIMSK >gi|343385805|ref|AEM21295.1| pyruvate phosphate dikinase, 741539..744526 [Brachyspira intermedia PWS/A] MASKKMVYFFGNGKSEGAKETKALLGGKGLGLAQMTESKVPVPAGFTITTEVCDYYSKNKSYPKGLEKMVDENIKKLEKAMNMKFGDVNKPLLVSVRSGAAISMPGMMDTILNLGINEKVVEGLVAKTNNPRFAWDAYRRFIQMFGDVAMGVDHDKFEEILDERKKAIAPKVGKPEKEVKDTDLDVEELKIVVEKYKAMYKEEKGEEFPEDPKVQLWHAINAVFRSWNNPRAEAYRKLNDIRGLLGTAVNVQAMVFGNMGNTSATGVCFSRNPSTGENKFYGEFLINAQGEDVVAGIRTPQEITLEGSLEWAKNNNISEEERKAKYPSLEEVMPSVYKQLVSYKNQLEKYYSDMQDMEFTIQEGKLYMLQTRNGKRTAAAAVRIAVELAEAKIISKEEALMRVNPSDLDQLLHPMFDPTAKKGAKVLAKGLNASPGAAVGKVVFAADRAEAMKEAGEQTILVRIETSPEDIKGMNAAEGILTARGGSTSHAAVVARGMGKCCVAGCSALEIDYANKCMKVGDDVVNEGDYISIDGSTGEVMLGQVATKEAEMSEDFKKLMQWADDKRKEKKFEVHTNADTPNDAQIARKFGAEGIGLCRTEHMFFNADRIKSVRQLILVAEEVKQLKEKLEAAEKIGDKKTIEELEPLYKEPRKLYDEALDSILPMQREDFIGIFTAMNGYPVTVRLLDPPLHEFIPHEDSQLQELSNEMNVSFEKLRAIRDSLHEFNPMLGHRGCRLGITYPEIYDMQARAILEAAVKVKKNGVDVHPEIMIPLVGTLKELKMIKDRIIKIAEEVFAKEGSSVKYKVGTMIEVPRAALVADKIATEAEFFSFGTNDLTQMGGGFSRDDAGKFLKDYVNKEIYEKDPFQSLDQEGIGELLRIGVTKGRAANKNLTVGICGEHGGDPATVMFCYSIGLNYVSCSPYRVPIARLAAAQGIISSKPAKKSAAKKPAAKKAASKTASAKKPAAKKTASKVTAAKKPAAKKAPAKKTSKK >gi|343385806|ref|AEM21296.1| PRK00943: selenophosphate synthetase, complement(745658..746671) [Brachyspira intermedia PWS/A] MEGGCSAKIPPDLLEKTLAPLMQIKTDSNLLSDVDIGDDAGVYKISDDNALIFTVDYFPPVIADPYGFGQIAACNSISDIYAMGGEPKLALNITMFPKDDSLNILANMLKGGQDKATEAGVLVVGGHTITDVSVKYGMAVIGFANPNKITTNSAAKEGDIIIFTKPLGTGACLAAMRQGLIKESHIEDVFESMKTLNKKACAVMNKYNVKCATDITGFGLIGHAYKMAKASNVTIELQSSALPMFNKTYEVLDMGCIPGAAFTNMRYVGDNIKVDDNVDYNLKMLSFDPQTSGGLFICADKSNAENILADLWREGIDCACIIGKVKNKEKEYIHLTK >gi|343385807|ref|AEM21297.1| conserved hypothetical protein, 747070..747501 [Brachyspira intermedia PWS/A] MTKKLFALLITLTIISTSSAFADWVVPASSLPQKARSFIQQVYPNVQIWMVERDGGKFEVKLSNGTQIDFLPNGDWHSIDGEYNAVPFSALPANIANTIRNTYPQAAVIDVEKEWGNYKVKLNNFMELFISSNGQLMGQKFDD >gi|343385808|ref|AEM21298.1| Predicted choloylglycine hydrolase, 748375..749379 [Brachyspira intermedia PWS/A] MYHSRFKGSHYEAGLKYGKLLSKNNINPLEKIKISDERKYFANKCMPIYNKFFPEIIEEIKGLADGLNTNNNIKIDYKDICEFLFTIYSFTFDNKCSSFAFKTDEDIILAKNSDFLKDIKNYCDSVYYKLNDSYSFIGNTTAFIEIEDGINEKGLTAALTFVYPTIIDYGFNAGMIIRYILEKCSAVDEALEFLKNIPISSAQNIVLADRNGDIALIECNCKNIEIIKNDYVFISNHFVSKSMKEYNTDIEDDIYSQERYITMNNAFKNYDYDLDFAKKLISGEYGFLCQYDRKLNFDTVWSSIYSIKNKKIYISEGNPSRKKFKEDKRLKFDY >gi|343385809|ref|AEM21299.1| hypothetical protein, 749428..750819 [Brachyspira intermedia PWS/A] MIVLSLEEINNIVEKNYNKKFDKTTSFIDDSIISNVLIKDKSAVVSSKVIRYILGEYLDIKEAYRLRNADMIGNSLDSESLSETLENVYKLWDENNKTKSILYPYCIFANNIQLDNLYKRAVSIARGRFKLACSMLEAIALSGTKKGFSLVYEASRKFKQASVKNTCSFIIEDITKKLGISKEAFADKIIPDFDFDKNGLRIIESDNKKFKITLKPDFTISIFDEMKNKEYKTLPKDFPQTPKKELTKLKSDINKMLKTQTERLQLVLMDGRKWTLNEWKEIFFDNPFMRAFAVKLIWGVYDKDNNLLSTFRYMDDGSFNNADDEEMNIEDNALITLLSPMETSRELIEKWKSQLSDYDIVQPFNQLSLETKGDLISRVPKKATARSIKNTALKLGMDKVEDSGFISFYFLYDYYNNAVVSIETSNLYYGSNTTDEIDIKIKFKNADERFEYGAYLILSDYLK >gi|343385810|ref|AEM21300.1| 3-ketoacyl-(acyl-carrier-protein) reductase, complement(751177..751926) [Brachyspira intermedia PWS/A] MSSKICIITGASNGIGKEIALLFAKNNCDIAFIDKDNENGLKLQKQIKDMGRECLFINDNIDNEKSIKSFTNKIIEKFGNVDYLINNACYSNKGLLSNCSYDDFLEIFKIGAAAPYEITKNLMNNFNEKAGIINIASTRAFMSQKDSESYSAAKGAIIALTHAMAISLSHKVRVNSISPGWINTIDDASFSKEDILQHPSAKVGNTSDIASTAWFLCNNDFINGENITVDGGMTKLMIYHNDEGWKLDI >gi|343385811|ref|AEM21301.1| HisM, ABC-type amino acid transport system, permease component, 752237..752749 [Brachyspira intermedia PWS/A] MRYIFDIYAWIFRGTPLILQLIFFYYGLPLMTNNMIAFPAFTSAAVTFILNYSAYLMEIFRAGIESIEKGQYEAGFALNLSYRQIMTRIILPQAVRRVLPPLSNEAINLIKDTALVIVLGIGDLMLHARQILTRDYKLLPFLIAAIIYLLFTSILVFVFRQLEKKYVIRN >gi|343385812|ref|AEM21302.1| GlnQ, ABC-type polar amino acid transport system, ATPase component, 752733..753515 [Brachyspira intermedia PWS/A] MSSETKETNLKVVNIKKHYKGTPAINGVSFTVNKGDILSIIGPSGAGKSSLLRNIIQIEHPDYGEVYIDNEVLFCKREGEKALDISHADFMKRKEKIGMIFQHFNLFPHKTALENIIEAPVIVKKQNKDEAIEEALKLLDSVGLKHKKDSYPNELSGGQKQRVAIARALAMKPEILLCDEPTSALDPELIGEVLTVLKELAKEKMTMIVVSHEISFVHELSTNIAFMDAGKIIAMDTSDNFFNNQSNERIKDFLNKIFHK >gi|343385813|ref|AEM21303.1| extracellular solute-binding protein, family 3, 753769..754605 [Brachyspira intermedia PWS/A] MKRISSILLFIIFAFIVSCGGGDKAAADNTAENNTAAVEDNSLQKVKDAGKLVLGLDDTFAPMGFRDENGEVVGFDIDLAKEVANRLGVALEIKPIEWSSSILSLNKGDVDVLWNGVTINEARKQQINFSKPYLNNKLVIVKAIDDNTINSKDDLSGKVLGVQVGSNDEALTADPSSKNAKEIRRYDVNVNAFLDLQAKRIDAVVIDEVAAQYYISEKKAPFVVVDNSPLTEELYGIGFRKSDAKLLAEVDKILDEMRADGTATKISEKWFAKDIMLK >gi|343385814|ref|AEM21304.1| Leucine-rich repeat containing protein, complement(754759..755508) [Brachyspira intermedia PWS/A] MENIDKKIEDQLNNIYDFFKNNNINKYSNYSRKKLLNIKKLDLSSSKLTYIPKEIYILTNLEILDICNNKIEEIPDSICSLVNLKYIDASFNKLKKLPKKISLLQNLEEIDISNNMFKTFPKEIYELKELKSINISGYYLNEIPKEIFSLTNLEKLDLSNNKIANIPNEISKLQNLEKLYLNNNNINKIPKIIEKLSKLKILSLKNNNLEDINEYIGKLKNLEEFYFSSKYTIKAADNFYYLENLKNYI >gi|343385815|ref|AEM21305.1| 3-dehydroquinate dehydratase, type I, complement(755584..756342) [Brachyspira intermedia PWS/A] MENIVKIKNIKLGDGIPKICISVVEKNEKDIIKYIKEISKLPVDIIEWRADFFIDDIAKYNDNFDDIISFSKEIKKLSSKPILFTLRSSKEGGNIKYNTYESIINLYDNIIKNKCFEAIDLELLTLKENDIKKLIKSASSNNIKTIISNHDFNKTPSKKEIISRINKMIKLKCDIAKVAYMPKNKKDVITLLDASNDIKNFPVIAISMGNIGIISRIFGSVLTFASAKRSSAPGQLESMKLKYILDTIYEKI >gi|343385816|ref|AEM21306.1| shikimate 5-dehydrogenase, complement(756380..757270) [Brachyspira intermedia PWS/A] MYNNTYKNNKATNMQINAETILTGLFASPSKHSISPIMHNEAFNKLNLNYIYLAFEVDKSNLKEAVNSIKTLNMRGGNLSMPNKKEVIKYLDKISEAAELSQSVNTIVNDNGILTGYSTDGEGFIKSLEEEQVFIKDKNITILGTGGASIAIISQAALYGVKEIYVFKRDTNWNEQKKIIDNIASKTNCNITLYSLENKDILKSKIDNSYILINATSVGMKEDVSIIEDTSFFRNDLVVSDCIYHPAKTKLLKIAEKEGCKIINGMGMLLYQGALAFELWTNKKMPVEYVKNIIFK >gi|343385817|ref|AEM21307.1| endoribonuclease, 757431..757814 [Brachyspira intermedia PWS/A] MDKKIIKTHKAPQAIGPYSQAVKSGNFIFASGQIPLDPVSGEMAENDIKKQTERVMENIKGLLESENLTMANIIKTTCFLTDMANFAAFNEVYANYFPENPPARSTVAIKALPKDALVEVEIIAVIS >gi|343385818|ref|AEM21308.1| hypothetical protein, 757943..758800 [Brachyspira intermedia PWS/A] MRNYISYFIKGMAIGIANAIPGVSGGTIAFVLGIYEKLTYSISILPNALIKLKWDEIKESLKVLIPVALGAAISIVLFLKLINYTFTYYPIPTRIFFVGLILGSFPFITKTVEEFNFKVFIAFFIGAFIMAIFVYFDINKPVGATTYAGNFSLIYGIKLFLCGIAAAVAMVIPGISGSLLLLILGEYENISYFISSFVDTFNFSLLIPLIFLGLGVVIGIFGISKLVTILLQKYKSTLFGFVLGIIIVSFLSLWPNMTTMSLPMLASTVISMCVGFLVAIAMEKI >gi|343385819|ref|AEM21309.1| hypothetical protein, 758987..759976 [Brachyspira intermedia PWS/A] MNRKRNKKNGIYLLFAFISIIFFYISINVLYTQTPAYYDEDLINNLPNAERLVSNIKISTSETNNNIVLITWEGITDNNLVYYVYRSKSPIIGKSSFSNSTVVDYVKATNDSKSYIISDSPIITSTYYYAVVSYVNDSVFYNAKENIDTSSLSFNGIAENNTLNNNLKYNTNINNNIITNTITVTNNVIFTNNILLTNTVTLTNTVTLTNNITVTNNVTSSVPSSSSSSKGSVNNVSKTQQNEYSRYKTQYDRALAQFKLKNYSQAASILEPISRKNINRNLYYDINLLLGKSYKYLGRKKNSLDVFNRIKSYNSQEVNFWINQVLSDL >gi|343385820|ref|AEM21310.1| TPR domain-containing protein, 759992..761032 [Brachyspira intermedia PWS/A] MKTYAAVLASVITIVAILGGVFITKISALSSPERYFQKGKRSYEIENYQEAINNLNEYLSIDSKSRPVNNIAEAYFMVADSLKRLKKYSLAKERLTSIINNPDFAQYSVNAILAYADISRLENQADPYIISKLQEYLKVSDSNLASKINVQYGYQLFLQKKYGEALSYFLRNDGELAVLGRARVYFNMNEYDRAFETYEDFLKYNKTSIYYDEVVRTYLIQVPAMAHKTFVEGNYIKSRMYYTKIAELFPRTEYAEDALFRIAQSYYNEKNYNKALDYYNRVRLNNVYTLDAEALLYIGLSYFKVGRYSDSYKVLDTFISEYPANPNVSRAREYMQALQETLLAIN >gi|343385821|ref|AEM21311.1| methyltransferase, complement(761189..761731) [Brachyspira intermedia PWS/A] MPIFAALGSICTLMDYSQKQIDSDLLVSKRENYNINLVKADMSKTFPFDNESFDIIFHPVSNCYIEDVMHVWRESFRVLKRGGIIMSGLDNGINFIFDETSENGKEIKYKLPFNPLKDNKLLENAVKNNDGVQFSHTIEEQVRGQLKAGFKLIDIYEDTNGYGILHEYNIPTFWATLSMK >gi|343385822|ref|AEM21312.1| UDP-N-acetyl-D-mannosamine transferase, complement(761962..762720) [Brachyspira intermedia PWS/A] MIENKSILGIRIDNFKVSLEEILDYLKYGKNILIISLDVHKLLKIRYNKKLKEIIKNSSLVIAAHPSIAKAYKFIHKEELNYINEFLLFSRVLDYIEQKKMSMFLFGDEEKYFFTISEKIKKIYPGIYMLGNYQNTKDKAELDKAFIGFKKIEPDVFLMHMEFKKSLYWFNNNKQNLDMKFFIPFKKPLDSFAGKIKAPSMEILNKNKHESFYTKKNIFRIFLYIDYLRFWILVLFEKLTTKKDKQTIPSNS >gi|343385823|ref|AEM21313.1| 6-phosphofructokinase, complement(762750..763730) [Brachyspira intermedia PWS/A] MADIKKIGVLTSGGDASGMNPAIRSVVRTAIANGLEVMGIKEGYQGLMYNDVYQMNAGSVGGIINHGGTILFSARSPEFQTEEGMKKAADNMKYHGMDALIVIGGDGTYKGALDFYNHHPEYPIVAIPGTIDNDIFGTDYTIGYDTAVNVAMDAIDKLRDTATSHGRCFVVEVMGRHAGYIALEVGIASGAEDILIPETTTDMDKIVEELQIAKKRGKKSSIIVVAEGDESGGAMEVAKQIEGKTGFDTRVTILGHMQRGGSPTSRERLMAARFGYIAVKALLEGKKNVAVGIWKGEYTYTPLTDAVKKVPKVDPIDLALCRTLAI >gi|343385824|ref|AEM21314.1| Mg/Co/Ni transporter MgtE, 763869..765233 [Brachyspira intermedia PWS/A] MVENKEYTEIINIIENQRWDKLKYLLASMHAAEIVDVIRILDSDKNRSIVFRLLSREMSAYVFSELEPEEQEKIIISMNENELKELIHEMSPDDRTSLFEELPSDITKKIFSLMGEKDLNITRQLLGYPEDSIGRIMTPEYVDVLPDYTVKQTLEYIRKYGKDSETFEVIYVVQKDDTLIGYILLKDLLFASQDDKIEDLMHTDIIYLSVYSDQEEAVRVGRKYDLLYIPVVDSKNALIGIVTIDDIFDIAEEEDTEDFHKLGAISIDDDFDSNIKQANPIVLYKRRIFWLFVLVFVNIVSGYVIGMFEETISKYVSLIFFLPLLIDSAGNAGAQSSTLIIRSLSVGDVKKSDWLFMLGKEILVSTTLGLTMSVAVSLIAIFRGGLIIALVVSLSMILVVVIGSLIGLCLPFLFVKFKKDPTTSSVPLVTSICDISGTAIYLLLATTILTNFSK >gi|343385825|ref|AEM21315.1| Na+-dependent transporters of the SNF family, complement(765441..766826) [Brachyspira intermedia PWS/A] MKKREKLGSRFGFILVSAGCAVGMGNVWRFPYITGQYGGGAFVILYIISIIILGVAPMVMEFAVGRAGGHDIATSFQKLEKKGHNWHKIGYVQILGNVLLMLFYTTICGWCLSYFYFMLSGRFEGLNANEVGNFFNGVLGSASTLTLWMGISLLIGIIICSFGLEKGVERASKFMMISLFALLMLLIIRALTLKGAIEGLKFYLVPDLNKLFGNGLTGFIGIFYAAIGQAFFSLSVGQGGMAIFGSYIDKKQSLTGEALIIIALDTMVALFAGLVVFPACFAFGVNPGEGAGLAFVTLPNIFNSMPLGRLWGALFFLFLAMAALTTIIGVLENIYSFIMDKFKITRQKTSIILFVMLFILSLPTTLGFNILSNINPLGEGTVIMDLLDFIVSNNILPLGALVTLFFCTRDFGWGFDNFLKEANTGEGIKFPRQLRFYISYILPFIVLAIFLYEYINRFFLK >gi|343385826|ref|AEM21316.1| hypothetical protein, complement(767259..767855) [Brachyspira intermedia PWS/A] MKYIRYIIVILLININIVFAQLPELFDLNGYKDLKFGMSIEEADNKITNYNLNVYADFFESFELKNNTVLNIYKNDTQKLAYYLYFYNNELYRIEICNHIGDIYNNPSFYNPVTMADINNIKEELTFQYGQITKTDVKHYSFYKKPFEEYIIWWSSELASVSLYIKPDLDTLENVMKHYSYRISFYDEIKIKEIYSSK >gi|343385827|ref|AEM21317.1| predicted Rossmann fold nucleotide-binding protein, complement(767852..768517) [Brachyspira intermedia PWS/A] MRRETYELQNSDMPNESWRIFRIMGEFVEGFETMSYYKNAVSMFGSARTSEDHPHYKLAYETAKLLGENKYDIITGGGPGIMEAGNRGAFDANAGSIGLCIELPFEQKTNPYVKEELKFRYFFARKVMFLKYAKAVIIFPGGFGTMDEMFETLTLIQTKVLERMPLIVMNSSYYTDLIEWIKKDMIKENYIDVEDLNLIKYAETPQAALDIINSFHQNKQK >gi|343385828|ref|AEM21318.1| hypothetical protein, complement(768539..768865) [Brachyspira intermedia PWS/A] MDNDIKLFTADYLPSNYNYELLGLVKGNIAQAKHIGKDLLAGLKNIVGGEVEGYTEMINEAREIATKRMIEEAKKLGANAIIGIHYSSSSVMEGTTEVIAYGTAVIIK >gi|343385829|ref|AEM21319.1| hypothetical protein, complement(768882..769208) [Brachyspira intermedia PWS/A] MSADIKMFTVNYLPSNYNYEMLGLVKGNVSLAKHVGKDLLAGLKNIVGGEVESYTEMLNEAREIATKRMLEEAQKLNANAIIGINFSSSSVLPGTVEVVAYGTAIVLK >gi|343385830|ref|AEM21320.1| hypothetical protein, complement(769390..769938) [Brachyspira intermedia PWS/A] MKKFIIFLFLFVLLFSLFCYAQNDVAQKESTNRDWFDSFLKKYRDRFKDKKNTGNFNTANENEYLFSFLENNSQLFKSEKEADILFNNMDKNPQLFTVFDNNPELFNIINQNPELFINILLDEQKLELFINAPSQSEFLFNSGYSKESLFNSAYNPKFINTDVSQKEENYTVQLWKEWGIMK >gi|343385831|ref|AEM21321.1| hypothetical protein, complement(770279..770581) [Brachyspira intermedia PWS/A] MKKIIIFLFLFILLFSLFCYAQRENNNTETYKNDKLYKYPSDIDYQPKLLGFFFPSEPYSNSNNIFGTNRYKGVSYTNLNKSLPNDPETVKLWKEWGIMK >gi|343385832|ref|AEM21322.1| periplasmic ATP/GTP-binding protein, complement(770818..771759) [Brachyspira intermedia PWS/A] MSKFLSAIILSAFLFAVSCSNNADKATTTENTVKAEPTKKEAAAINVEGLAAPESIKFRNGKLYIANLGDPNAPADGFIIVANEDGSNPQKLFEGQLDSPKGFSFLTDDIIIIPDQVNDSSMTGNLVLANIKENKIITKLPIEGSKFLNDTVVIDPATVALTDTGASTVHFIKVDNNSALSITSSVTGVVGANGIFLDNGVLYIAGSTFGGDANGGDIYTLKTDGTGLIKWTASRLGAGALDGIAIANGKLYVSDWGENGANNNACIYVFDLNTKEQLEKIEGSLSGVADIDLVNNVIYIPELSTSLIKKVQL >gi|343385833|ref|AEM21323.1| Rrf2 family transcriptional regulator, 771926..772366 [Brachyspira intermedia PWS/A] MKINTKLSVAAHIVLCIAFFENEGTTSHLLAKSVRTNPSIIRKILLKLQEAGIVETNKKGSRLIKDEKDITLLSIYEAVFTEEERGLFNFHEPNHICPVGCAMFDVLGEEFNNVRLDFEKSMSKITIKQIADEVRKRKKHLDFMNK >gi|343385834|ref|AEM21324.1| putative cAMP-regulatory protein, complement(772379..773044) [Brachyspira intermedia PWS/A] MNDYIDILIKSEVFSNISRDEIINILEDLKIQKKSFKKSNIIIDTGDIVENIYIILKGKVEISKEYDDTRKNIVNILNQGDIFAEAFAFSTNKVSSIQALALENTELIKINIQNIFNANDNNTKNIFLHNLLRVISDKNKFLAFKNDILSQKSLRSKIIIYIKYMENIQKSKNIIIPFNRDKLAEFISADRSALSRELNRLSKENIIELDGNRISIINIKN >gi|343385835|ref|AEM21325.1| Na+/proline symporter, 773374..774855 [Brachyspira intermedia PWS/A] MFLIGMFFARRTKSTDDYFKAGGRVPALVTAMSIYATALSSISFIAIPASVYNNSWLLGMAPLGIILMVLWAAYTFVPFFRRVNVTTAYEYLGRRFDNSFRLVGSLTFILFHVVRMAIVIYLPTLAIQQVLPDLNPVLITVIVSIFCVAYTSMGGIEAVLWSDAIQTVVLLLGAFLVIIVGFSSAPEGIGQGFKLLADDGKIISPDFFSLDLAKSSIWVMIVGGFVNSIYSYVGSQDIVQRYATNKDENESKKSLFMNVPLLCTSVIIFIGMGSALYIYFHFKTTLPENVNGNAILPYFVVNALPVGISGLVIAAIFAAAQSTVSSSLNSVSTCMTADILEYLKPGMEDASKLKFARLSSWIVGIFSTLLAIYFIFNGQGDMFLYFQAITGLLGGPIAAVFLVGIFFDKVESKAVWVGFILSVIVAFYVSDPAGMLTKFIPGYAKPKIFEFMISFIIIGVGVIGSLLASFAFGKPSEEKIKGLTYSTTIKNKK >gi|343385836|ref|AEM21326.1| hypothetical protein, 774886..776049 [Brachyspira intermedia PWS/A] MKKIGLIFLFIFTIFALSCSSNTAASSSNTNVLDSKVDKKIVWEMGGHLPAQTGMEKNIGTAGVLYGSLGGKYIVVGGGANFPNESVLNGGAKKTYSDIYMLEDKNGVLEVVEHINWENELGYGASVTVTNGIYYIGGSSNPEADDDILFITLKDNKLNVEKIGDLPFTLQNGVAVYKDNKLYVITGKQAGKGSNKVYEYDLTTKEAKELAPVPGEASRTQAVAQLLNGNIYVFSGGDATAYTDGYKYDFEKNTWEKIADVALNNEGISLLGAVSVKLNETEMLVIGGFNKAVYDDAVYNLGNLKDAALADFRAKYFGADPYEFNWNSNILIYNCESNTWKTIGEVPFDAPCGEGLILIGNKIYSINGEIKPGIRTDKMYVGTIMAK >gi|343385837|ref|AEM21327.1| hypothetical protein, complement(776832..777050) [Brachyspira intermedia PWS/A] MVKSFCYLQTPRDLIKAEKILLDAGIEVVVRPAPEPVFGVCNMAIDIEDKDKLYIISLLEAAGLVVTIKDME >gi|343385838|ref|AEM21328.1| aminotransferase class-V, complement(777053..778168) [Brachyspira intermedia PWS/A] MKNYYFDNSTTSFPKPKEVAEEMHNFLINVGGTYGRVNTKRGKETTQKIEECRELLAEFFLGVKNTSNIVFTPGATRSINDILIGLDLNNCKVLISSLEHNAVVRPIHKLSINKNVEYKIIPSLDGGIIDINALYEIIKKEKISLVIINMESNISGVIQPIKEIKETIGDIPLLVDATQSVGIHDIKADEWNIDFIAFTGHKGLLGPTGTGGFYVKNPEKLNPAYFGGGFGDGYETPYSIPEIYESGTPNTVGIIGLLAALKNRPNWNINIDDIINTIKKIENMNKYKVIWSKNKDTQGFLFSIADINNNINMANFAHMLYEDYNIECRYGFHCSFLAHNFYKNDNGALRFSFSPYTTKEDLEYLINVLGK >gi|343385839|ref|AEM21329.1| protein of unknown function with an N-terminal SirA-like domain, complement(778186..778758) [Brachyspira intermedia PWS/A] MKTVDARGIPCPKPLILTKTAITNAALNEEIEVLIDDDVAFHNITDFLNNNGITYKNEGMNFKITKNKDLSSNDTSKEKSSGPVIAVVDKKVMGQGNDELGELLLKAFLGALKDANPKPEALYCYNGGVYLGVEEPYKTLLQELRDAGIKIFFCGTCVKFYELNDIKVEEQTNMLGIIEAMGNASAVIRA >gi|343385840|ref|AEM21330.1| hypothetical protein, complement(778883..779377) [Brachyspira intermedia PWS/A] MFSNIDILLIAILIFALIYGLYRGLISIIIPVIAIIITFIIAPLIYNHMSKYFDHSIILKIISLIATYSITRIILSKVEKSIKDILKIIYLSWVDRIIGAAALLFISSAVIYFIVGIIITLSPENTQLFSQSIVLNYVFAIFHNVFSAFGKDNYMVYFIYNFIA >gi|343385841|ref|AEM21331.1| methyl-accepting chemotaxis sensory transducer, complement(779370..781244) [Brachyspira intermedia PWS/A] MIYLLLSIKTKKGIYITISVTLSFILIYNIISLIIIFLCTYGANKINPNLSIALYLTNNIIILIAVALMPINSKSFISRNKNLINLNNTIFIIVVILSLALIIVSIIYPNKFFTATINYYESESNSYYIKSVGLFYLIKNYIILLVFTIMFISTLADMIINYDYKSNIIMTISVVIALVLIVRYLYLEKTIENVGFDRIGFAIVISSSFRSISIFSSFAKNALESIKKESVLNNKLHLNLRTLNNIDRISEQLNIIDRNLMDTSMFVFEIDKEAKDAYNIISSKIDSILDANDRLMDAKNSKKNIIKDGLKYTNTIFTFFDKYKSQMQEHFRVLNQTISNMKESDFSNEQIMSLKNDLRLIKESFKETSSKFLNAIVESANQFKDVNSITESIYNTIEYIKAITNKTNLLSINAGIQASKAGFYGKSFSVVAKEIGALSFEISKGTDSIEKMLTDIFAGLVMIENSSFYIKDRCKIIAKEINRISDTIDKFIEEMENNINTDSKKLSHFKSLEQYNDVMSNILVNQNLIVLSIKENISAMLEVQNNLNSKIEYQNQDVYKIFNNFNNVIKSKDELNEITKKIGNYSSFSHTDIEALSNIINTHRKKSSFTFAPIIALLKKSSNV >gi|343385842|ref|AEM21332.1| methyl-accepting chemotaxis sensory transducer, complement(781352..783286) [Brachyspira intermedia PWS/A] MDYNFSLITLELGIPVIATIISIVGIILYAYIYFQLYEETQAIILLIGFLSFLFSGLEAANIITSLYSPNNSLALNMYKFEQLAFSLTIIPWMMYIRGKLTLSERFHFVLDKLYIAVVFILILLFAIALLYPQLFISTTMPISTLNETMKNSIKSRGELGAVYILRDFVFTVYSLVIICSFIYEMTVNKKVKENVLILILMCLISLAFFDDFNGISIYTKYSSNFLFFNNSTFTRITLVYAIFNIIMIYSSVSRFISAVYKKTTQSYDLESIKAQDSIIINTAINTAEKLSELKVNFSEAVNNLVSKVENTYSTINNLKNDINRVIEYTNEFITIENFQINDGKINITKINELIETYPNLQASVELQKKTLEESNVKLHDSVEKIYALQSQSRHIVTMFEDLQKNLEIEKSNFIKEFSKSETFGQLNFQINRIISFMTNMSDKTKTLAINSSIQASKAGEWYNNFSVVSKEVSELVSETSQATNRMQDLLFQIEDIFKKFTYSSNNINNNMSQLSGEVSMHYDRINKFNINMERQNDYNMNIIKNTDKMHNSISNMTNIIINEENDFLNIKTRIEEINDYVIDISEKASIENSEVKNLMRDMNKLLATSDDLESITNKLNEEMKKFLEYTNDLETKVDEYSKVM >gi|343385843|ref|AEM21333.1| MATE efflux family protein, complement(783519..784823) [Brachyspira intermedia PWS/A] MLQQLIMGMVSLIDNFMVAELGDIKMAAVNVSNQLNFIYLVILNTCYGAGGIYMAQNNGADNKEGMQQAFRFKVILPLIISISYMILMLVNPEIFMRLMTRGNASQEEILLSSTKYMSIIAFTFIPISISGAIGTSYREIGKPHIPLIISVIATFCNTIGNYILIYGNFGAPRLEEKGAAIATLIARIIEMILFIVYIKLHKEKFYVRTREILKVKLNVFYSMLKKSSLIFLSEISWGLSEMFMTALYNSRGGAETVAGMASGFTIANIFYLVFQGIFVSTMVVVGGTLGRGELEDAKNKARWILNGSVIAGLVVGLVQMSSTLLIPFIFSKLTIDAQAITRNLVILIACYMPVWTYINAQFAVSRAGGDTVFGFAVDVPVSLLMFAPLALILAKFTTVGPVAMFGIAKLTDFAKITVGVIMLKKERWVRKLTE >gi|343385844|ref|AEM21334.1| hypothetical protein, complement(785079..785633) [Brachyspira intermedia PWS/A] MEIILKKIFTLFSLIILTISLSSCAAKVHLINDTFYGQKVYQTDYISMSYWSETIKFRLKSANDPNNIILEAQYIADSSFNISDANKIVLKFSDNTYLILHYTSFMPKTESEIIYGTSIYFMDTAYVDRSYSINAENTIKEMKVLTDIRVETADGFKNLKVKKDAANDLIRLYNEMQEAISKNK >gi|343385845|ref|AEM21335.1| leader peptidase (signal peptidase I), 785778..786827 [Brachyspira intermedia PWS/A] MENPIKNITETIIGECRNFKHTLKEILYAIVIVLLINTFLIQNYQIPTGSMIPIIMPGDRLFANRFVYGVKLPFTDGLLGYRLPKIKSPQRGDLVVFRAPPSASFGCESAMPYYEPSPLVQMLKLPVMIFSLTPFTWDPRFLFADFLGEKLTGGTHMAPVPLFLGLKTVDLDPRKEFVKRVIATAGETVEIRNKKIIINGNEIEDKWGYFFYGDDREFVPIIDIYGPIYVPKKGDVIIFKKLVDRSDYYNDLSSFEVYINDKVVSDDIKLWYWMNIYVPNTKDRPDEYIYNVPEDYFFVMGDNRDQSCDSRMWGLVPYRHIKGQPMIAWIQSKRPDDVEQGFFKYFIIK >gi|343385846|ref|AEM21336.1| hypothetical protein, 786844..788490 [Brachyspira intermedia PWS/A] MYDQISKDTLKELFKIWKAKNIEDLDIKSSNVSLVSFKFYALSKEAKDIVLYVLKNESKELNSIDIAYSLKYSQKQVPAFFDYINEIKKSGLLYLKIKRRRLNSHDDTLYFLPNVKSIIESIILKDDIKIPYYVDASYTANAYKKYLHKIIHIYENGNIVEYNKAKIDDDELFTLCKSNILSVYFHQNDLKVYVAVNNKNVVENLEKSLKENIESSVFIYNHFNILNDIETFIYECDVQKLSTDDININFLTNNLESSTIINICLKLDLIKLDNKNFISLEYDNIKKYLSSSIEERMDSITKIVYKNYSDYYKHIFSIIENESISKSVLFMKLKEKYNLSITAETYNNIIYSMFILGIAEVSFYENAVLAIRNINPYTEENNFRKSFINGNFELTLINHYLFSNNFIYMCNLYFELDKQETVYTYTMTEESVLKGKTIISDEESEYCFDKFLVVLKNILLDNNVEIPKHIETSIKRWYERGIISYVYDNVTLVIIKDANKLEEIIYEAKRKGIIITKINDEYAIVKSSSSTKKSLTKFLRQRKIIVTF >gi|343385847|ref|AEM21337.1| S-adenosylmethionine--tR-ribosyltransferase- isomerase, 788515..789591 [Brachyspira intermedia PWS/A] MIDYLNKETYNFYLPENLIATTPNYERDHCKLMILNKDTGKLEHKIFSDIINYLNKDDVLVLNDSKVIPARIYAKKNTGGNVEILLLNKFNDDESTWECLIKGKNIKEKDILYLNYSHLENVGDIEALIEKDNISTKIIKFSKPLTSDILDSIGKVPLPPYIIQSRKKKGEEEYNDKDKEFYQNVYAKNEGSIASPTSGLHFTKELLEKIKSMGITVCYVTLHVGFSTFNPLKEDDLRNHVMHEEKFIIPKESYDIIINAKKEGRRVVSCGTTVARVLESEYDNYDFKRMEGSTDIFIYPPYKFKCVDALITNFHTPHSTLLAMVSAFAGYDNIMNAYKTAVENNYRFFSYGDAMFMY >gi|343385848|ref|AEM21338.1| Alkyl sulfatase-related hydrolase, complement(790115..791998) [Brachyspira intermedia PWS/A] MNKILTSILCIFLVSCSSNNFNSERKDATEYTKKENEKLKNYLPFDDNTDFENASKGFIETSDGNVSFPFISNQSAPDTVNPSLWRQAQLNNISGLFEVTPDIYQVRGFDLANITFVRGDTGWIIIDVLTTKESASKAIELFRKHKGNDPITGVIFTHSHVDHFGGIRGVIENSNIPIVAPEGFFEEAVSENLLAGNAMSRRSSYMYGGLLPKDEKGTVDAGLGKLVATGTPGIIKPNKIISKDYESFTIDGVEFQFLMAQNTEAPAEFMIYIPKYRAASSAEVMNHTLHNLSTLRGAKTRDSIVWAKAIEKSKEFLKNRTDVLFGSHHWPIWEQSNIDDFLNKHGDLYKYIHDQTLRYANMGYTPIEIAEKIQIPDNLAKEFYNRGYYGSVNHDVKAVYDFYFGAWWDGNPANLYKLPPEESAKRYVEFMGGENNIIKMAKKSYDEGDYRWVVEVLNNVIFANPNNENARKLSADAMEQLGYQSESAVWRAYLLTGAYELRNEIDQNMKAPQTTSLDMINALSAENMFEYISVALNPDKVKDKNISVLFNITDDNKYLVKIENSILKYKKYNNENTDYAIDINMSDFKKALFTKKADDLNINNKDAFNEFLSYFDTFNYWFNIVTP >gi|343385849|ref|AEM21339.1| Alkyl sulfatase-related hydrolase, complement(792054..793937) [Brachyspira intermedia PWS/A] MNKILTSILCIFLISCSSNNFNSKRKDATEHTKKENEKLKNYLPFNDNTDFENAKRGFIETSDDNISFPFISNQPAPDTVNPSLWRQAQLNNISGLFEVTEGIYQIRAFDIANITFIKGDTGWIVMDPLTVKESAEKALKLFRKNLGDDPITGIIFTHSHIDHFGGIKAVITDENKNIPIIAPKGFFEEAISENLLAGNVMGRRALYMYGNLLEEDEKGNVDIGFGKKVAGGEASIVKPTKIISKDYESYSIDGIEFEFLMAQNTEAPSEFIVYIPKYKAASGGDVMNHSLHNLSTLRGAKTRDAILWSDVISKSKEFLSGRTEVLFGSHTWPIWGDENIQVFLTKQSDIYKYIHDQTLRLANMGYTPLEIAEKIQIPDSLSKEFYNRNYYGTVNHNVKAVYDFYFGAWWDGNPANLYKLPPEESAKRYVEFMGGEKNIIKMAKKYYDKGEYRWVVEVLNHVVFANPNNIEARRLSADAMEQLGYQSESAVWRAYLLTGAYELRNGIDENRQIQKTDSKDIINSLPIYKVLDYLSVSLNPDKAKDISIYLNLSDENKYLIKIENSVLKYKNYNNEETDIQINADINNFKKALFTKNIDNLDINDKNKFNDFLSSFDMPEFWFGVVTP >gi|343385850|ref|AEM21340.1| putative transcriptional regulator, 794041..794646 [Brachyspira intermedia PWS/A] MKKIEKVTRKEQAEQTKKKIVETTMNLLKEHSLNELQIKDICTNADISIGNFYHYFTNKQEIIFYIFNTNAEVYKEKILSRDKTNSYKDILYAFKEFSKLVAELGGDLILEIFNYSIMNRNNALLSKDAFFYNHILSLVDSLKKSNLVIYDDSAESITKRFIVFFRGFFYEWALSNSNFNLVKETEKEMKLYLSLFIKIDD >gi|343385851|ref|AEM21341.1| membrane dipeptidase, complement(794769..795722) [Brachyspira intermedia PWS/A] MIFDAHSDIWTDVTVKISKGENNIIKKYHYDNLIKGKIGGSIFVIWTEPKNYNRALERVREIQDAIKKELEYIDDVILIAKSYDDIIKAQKENKLYIFIGFEGLISIDDNINLLDEYYEFGARHASLTWNEENKLATGARGDSNRGLTSLGKKAVKKMQEKGMIVDVSHLNDKSFFDIMDITSAPIIASHSNARALCNSMRNLTDEQLKAIRDVNGVIGYNSYKDFTDEDTDKQTLNRAVDHIKYIADKIGIDHIGLGFDYNEYFEDEEVPPAVKGLENASKSYDIIIKLKEAGFNDEEIEKIEYKNFHRIIKEIIK >gi|343385852|ref|AEM21342.1| hypothetical protein, complement(795743..796324) [Brachyspira intermedia PWS/A] MNNDLKYNILIVFISIVINFALTFIVLLLKIPFLFLDSVGTILSAVILGPIYGAIVGILTNLIISIFLSYSHLNFAIVNALIGIIIGIAAKKFQFGIITAIISGIIIGILSPLIGTPISIILSDGFTGTTIDSFIRLLNENGFGFFQASFLMRLLTNIIDKVLSCLVVYAAVRNIILFQKNESTNESNNDEIN >gi|343385853|ref|AEM21343.1| putative membrane protein, complement(796439..797005) [Brachyspira intermedia PWS/A] MKNKIIYDITIMIISILANIIMGHLVIILKIPFLFMDSAGTILTAVTLGPIYSAVVGIATNFIISMTVDYVNLHFAIVNVVIGLTAGVIARKYDFSKIKVSIISGIIIGLISTIVSLPIVIIAAKGVTNKPIDNFIQLIQNSGKSFIISVTITTISSAIIDKLLSSILVTLAIKHILFLKRENNHHYK >gi|343385854|ref|AEM21344.1| DH oxidase, complement(797157..798515) [Brachyspira intermedia PWS/A] MKVIVIGCNHAGTWAVKTLKATDPNCQVVTYDRNDNISFLACGIALWVGGVVKDPKGLFYASPESLKSEGVEVHMGHDVTKIDWANKKLYVKELKTGKEFEDTYDKLILATGSWPVTPPIEGLKQEGTTYGLKKGIFFSKLYQQGQEIIEELKKPEVKKVMVVGAGYIGVELIEAFKNHGKEVILMEALPRVMGNYFDKEITDEAEKRIKEAGIEMHLGETVKKFEGDDRVKKVVTDKGSYEVDMVVMSVGFKPNSDLYKDYLETLPNGAIVVDTTMKTSKDPDVYAIGDCASVYSRASEKQEYIALATNAVRMGIVAANNALGKHVEYCGTQGSNAICVFGYNMASTGWSEETAKKKGLKAKSNFFKDSERPEFMPTHEEVLVKIVYEEDTGRLLGAQIASKNNHAEAIHAFSIAIQRGMTVQEFALSDFFFLPHYNKPLSWMTMVAYTAK >gi|343385855|ref|AEM21345.1| methylthioribose kinase, 798920..800134 [Brachyspira intermedia PWS/A] MTNFNEYFLMEEKDVLLYVKNKLKYFSQNDNITCKEIGDGNINYVYRISNGKDSIILKQAGVHTRSNSSGRILDINRNAREAEILSFYGSILPDLAPKIIYIDKVMNLFVMEDLKSFLILRDALMKGQIYHHLQEQITDFLVETTLSTADFFMDPFTKKENVIKYTNKELCKISEELVFREPFFNVLKENVFSESLNKFVEDNLYNNKQIQLEAAKLKYEFMNNPQALIHGDLHTGSIFVDDDYIKVMDCEFAFYGPIGYDLGTIMANFIFSYVYHLYVTKDRNYTSFLFKVIDDILRLFKNKFITKFLHESNDISAQNDYFIEYYLLEVLKTGFGICGLELLRRTTGCARVKEIESVTDPDIRRNIEFTLLNIGIECLSYRDRLSEEEKFMKFVDNIIDNIDL >gi|343385856|ref|AEM21346.1| translation initiation factor IF-2B subunit alpha, 800183..801238 [Brachyspira intermedia PWS/A] MINRVDKELAFMLQFENIAWYDDGCVKILDRRVYPNKVNFVECKTHKEVSKAIADMVTQSAGPYLAVAMGMALAGYESRHLEGNDRIDYLTHACNTLANSRPTTSGRMMLITKSCLEAGTEAIKSNKDPIEAMFNRGIELSTKRYSKIKKIAENLVSMYPDKGTILTQCFGESIVGFMIQEFQKKNKDIKVVCAETRPYFQGARLTATVAYDQGADVTVITDNMVAYTMQEKKIDVFTSAADLICLNGAVVNKIGTFQIAIVAKYLGIPYFVTGAPDKGYHGLEDVHFEFRDEKLVTEAMGVKTSKEGVKGFYPAFDYTPPHLVSAVVTDLGIYSPYDVFKYYIGNDEGEY >gi|343385857|ref|AEM21347.1| hypothetical protein, complement(801239..802690) [Brachyspira intermedia PWS/A] MDIDLDKYTSIDLNFIKDNIDIIKFNSPEIICTSNDNLYLSIPNYKIDILFDKNSINSDIFDNFYIAKNSKSIVDLVIEKNDNDQYKQIDSINQFLKVYKDCMPDSENTKVFEYKILEIILEETPKERFISIKNYIDILNQYYNKQLYAEAIQYILDIITQLAFIERINLIHLVNASKDQMNQMYFDNLEYYDTQIVANDLILSITKLVEKIYPNISLFYGFDNFGCRNVIGHGNRVFIIFIEFMLYYNEQIDNHLNLKTIINFNKKYKFFYEKVFEKYKLNKTNIKFNDIFKNGLKKISIENIASFAAGAFWHDVVKIKELDYLNINKSKEYAKRSTSHAIKGYQFLKLFRNYNDNISLIVGMHHEYYGYGNGVIEIINKQFNENRSLNPSSLISDSSDDVQTLQSLAFFPAKVLEIIDLFDTTVMPQKSYNRKDMNTEDAIKLIYDNYIVKETQLDPILFELFVDFLIDIKKENIQNPLRD >gi|343385858|ref|AEM21348.1| ribose-phosphate pyrophosphokinase, 802986..803939 [Brachyspira intermedia PWS/A] MGITDEILILSGTANPQLSEDVVKNLGLKLGNMEIRKFADGETFVQVEETVRNKDTYVIQPTGRPSSSESWMELYCIIDALKRASAKRITAVIPYYGYSRQDRKNEPRVPITAKLVANLLSEAGAHRVLALDLHAAQIQGFFDIPVDHMLSKNVFLDKIRKDLDMSNSIIVSPDIGGVGRARAIAKQLNLDIAIIDKRRDRANECEVMNIIGDVNGKDAIIIDDIIDTGGTLIKSMQALKKAGMRRIYVFITHAVCSGDVYERINASDIEKLYITDSLKVMKDRLGSKIEVLSVAPVIADAIRHIHMELSISVLFDK >gi|343385859|ref|AEM21349.1| 50S ribosomal protein L25/general stress protein Ctc, 803957..804547 [Brachyspira intermedia PWS/A] MSENYTIKALQRDTKFKSVGRKLRNEGYALATLYGRENQYSIAVELKEFVKVFSLAGQHDIITLDIQNDKTREVLVKDYQIDGIKRSIRHIDFYEIDRNKKIKTYVPIHIEGTPEGVRLGGGTLEQVEYGLNIKAFPGSIPRELVVDVSELKVGDSLHISDIKFPEGVDPVGDASKAIVTVVTTQDDDANKGAAEA >gi|343385860|ref|AEM21350.1| peptidyl-tRNA hydrolase, 804573..805163 [Brachyspira intermedia PWS/A] MMKLVMGLGNPGEQYKNHRHNVGYMILDRVAKKLNVELDIKKKKTVFGKGKSGKLEYLLLKPQTFMNLSGEAALYMASFMKITVENIIVIYDDMDIPIGEFRVIPSKNDDSEAEVDDVEIDHNGIKSIKDSLKSYNFTKIGVGIGACPEDEEKADFLLAPFSKDERKKIRDISDDVVDAACIALFESPQAAKKKYP >gi|343385861|ref|AEM21351.1| putative peptidyl-tRNA hydrolase, 805160..806056 [Brachyspira intermedia PWS/A] MITKLIIGLGNPGDEYKNNRHNVGFILIDKIAENFNINFDNNKKKSLYARAKEKDIEYILLKPQTFMNLSGESAIFISKFFNIKPEDIIVIYDDMDIPFGTFKIKKGGSSGGHNGIKSLISHLQSDDFTRIRIGIGRPSAGKKVNDYVLSNFSKKEREDLDTVIANDIIDAVKISLFESPVIAQNKYNKKIGKENSDKSKGNKNMIKIVARNPVSSENKSKFIETAKELIEKSRKEKGCISYNLYESVDGKYLTFIEEWKDEKAIESHNNSEHFKAIVPKLGELTSGDKDVILYKEVK >gi|343385862|ref|AEM21352.1| serine phosphatase RsbU, regulator of sigma subunit, complement(806069..807157) [Brachyspira intermedia PWS/A] MKNERVLMLFKFISMVFLILFLLLNIACISYYENKFTFILLFVLFILFFIPGIILYKNLINLYIIKDYKQVEEKTSDGKIYRFSKINSTIINDYQIAIKDLKEKNSYILGRYDVLDDIKKQYKKDMKKARKLQENMMPKKMPNNDRVNSASLYKPLETIGGDFFDYIYLDDDRILFIISDISGHGVEAAIITAMFKTVFRNFAASFKSPASFIYDINNYIIKILPINYYLTMTVAEIDLKNKVVKYSNASHTPMLVLENSQIKEYNKGGTIIGLFPQAYYEEESINIKKDDILIFYTDGVTEASRSKNKYDFYGIERFKKVLFNNRNNKAENIISNIEKDFYDYLSYMSPDDDFTIAAFKIK >gi|343385863|ref|AEM21353.1| conserved hypothetical protein, 807384..807848 [Brachyspira intermedia PWS/A] MILKPIKSEFNQDFHDSIWKAKNYIRDHYDELKKLPNGKHLLDKEICEGAFINVTEYDNKDNPPWESHLKYVDVQIIFEGSEDFIIANTSTLKPKSYDEASDYHDWEGEGTVRLTLSQGEILILLPYDAHRVGLPPKSGKNHVKKAIVKVPYKG >gi|343385864|ref|AEM21354.1| multimeric flavodoxin WrbA fused to cytochrome c-like domain protein, 808096..809046 [Brachyspira intermedia PWS/A] MKVMGIVAGRHNGNSEILVKQALTAVKDAGGEAILINLFDYNIKPCSGCESCTIAMGKIFKEGGEYKGCIYKEKDDMDKIVNVMNQCQGIIVGCPTYDLLPSSLYLSFAQRFLAYELSFRIQIGQVKEDPHTVAGLIGVGGSKHDWQTMSLEGLAATMFTQSMTVVDMYLAESVGRPGNVLIHKDYLDRAYQMGNNIVEAINTPVEERKWLGDPNLGLCPRCHSSLIYPGEEHWDGVKFNFECAVCGAGGDLVKDENGKYKFVLAENGLIRDRNINEARAVHLQEIIHTRDNFMSRKSEIEEEYKRFREMKFDTIK >gi|343385865|ref|AEM21355.1| [Fe] hydrogenase, large subunit HymC, complement(809135..810883) [Brachyspira intermedia PWS/A] MVKIKINGKQIEVEEGLTILKATKKLGIKIPSLCYHPDIPPTSACGICVVKLANQGNKYVRSCSMIVEEGMDIITHDSEINTVRKGVLELVLSAHPNDCLNCIRNGECELQTAAADFGVRNSKYDNIKQNHPRDESAGSIVLNPEKCIKCGRCVVVCQEMQKVHALGFVNRGFDTYFAPGAVSLKDSPCVDCGQCAAHCPVAAIYEKDQTREVEDAIDDSDTYVAVQMAPAVRVALGEYFGLKPGDNITGKIYAAMRLMGFNAIFDTNFGADLTIMEEANEFVKRFTESNGTAVMTTSCCPAWVKYAEEYYPDLLDNISTSKSPHMMLAPMAKTYYSDKAHVDPFNIFNVSIMPCTAKKNEIRKNETMYSSGYKDVDVVLTTREFARMIKHYGIDVAGIEPEEADSILGEYSGAGTIFGATGGVMEAALRTAYNIIAGSNMSNLDFEDVRGLDGVKRATIKILDKEVRVAVVNGLHNVDPVMQEIRAAKEKGENPPYHFVEVMACPGGCVGGGGQPYGPTNEVRIERAGGLYNEDKNTVKHRCSHENENIKKLYDEFLGKPLGERAHHFLHTSYKADEKYNK >gi|343385866|ref|AEM21356.1| DH:ubiquinone oxidoreductase, DH-binding (51 kDa) subunit, complement(810898..812586) [Brachyspira intermedia PWS/A] MAEKLDRKKLEEYRINKEREIGLRKGRESSTAHKFHILVCGGTACESGKSDEIVRLLREYAEKNGISDDVLVVKTGCFGFCSQGPVVKIMPGRVFYTHVGPEHAQDIIEKHIMKGELLLKILYKEQREHRDFSKEINFYQKQRRIVLKNCGIIDPENIDEYIGNDGYKALSKVLFEMTPDDVIKEMQTSELRGRGGAGFPTWKKWSFTKSVKDDQKYIVCNADEGDPGAYMDRSILEGDPHSVIEAMTIAGYTVGANKGYLYIRAEYGLAVNRVKIALKQAYECGLLGKNILGSDFSFDLDIRLGAGAFVCGEETALLASIEGNRGTPRPRPPFPAIKGLFEHPTVINNVETFANVTAIINNGGDWFASIGTENSKGTKVFALTGNVNVSGLVEVPMGTTIREIVFDIGGGIPNDKFAKGVQTGGPSGGILPESLFGTHIDFDNLVELGSMMGSGGMIVIDEDSNMVDFAKFYLGFCVDESCGKCVPCRVGGMQMLKILEKFTKRRAKEDDIQKLKDIALTMKNASLCALGSTAANPVMSTLKHFEEEYKAGIFTPPVPKKN >gi|343385867|ref|AEM21357.1| DH:ubiquinone oxidoreductase 24 kDa subunit, complement(812606..813100) [Brachyspira intermedia PWS/A] MSEDVSLLTQEEIADEIKSLVEEWKDSEGNLIMICHGIQKHYGYVPRNVAKYVSEEINIPLARIYEILTFYNYFTLEPPAENNIGVCMGTACYLKGGGQLVEEIKRKLNLKGDQKYSADRKYKLEEVRCIGCCGLAPVITFNDEVSGRVVVDDISKFIKDEEAK >gi|343385868|ref|AEM21358.1| hypothetical protein, complement(813322..814206) [Brachyspira intermedia PWS/A] MKDKKEVNPNTNHKIVNHDEANFSHVYFYKLLFEEKPELPNIELIKQKIRKYYNDIEIISSDNGIYSIAINDLKVKYKDEKEVPAQILMPSAMEFDYTSISDYYYSQMWDIKEAKEVIKNCNYEIMLSDFLAAGLDYKDRTTLLNNWLYTALQLFDNCIAVYNEQSGKLLLPEQILNNTYPKDFRFMLSGVNIRLFNVQDSNDIIVDTLGMYAIGLPDIQYHFHGLNANDVISHALNIAAYIFDKGDIIKSGDTIQSIFENVQWKCQYEKSLLKPHREILDINMLEYASGKRQN >gi|343385869|ref|AEM21359.1| hypothetical protein, complement(814384..815487) [Brachyspira intermedia PWS/A] MKHFFSFCFIFIVFISNIYADVKVDFRLFTSSYAYNGENTLWPDTRTTLTYFENFTEGAFDIKFNDLITLRVGASVFFPFTFEFPQGIRVFPVVTTQLSNEYISLRIGTMTGGHNLPSPIRDPLMDMTPVVRSTPDNTLIAKGPEEYKYNEPFTHGYYEYGASFEWFKGGKGEVYMNWQIQHNAKHRERFDVGITYAMDFAHDIATPYAAIHYWHNGGHEYAFVPGSPAITENYVGAIGINSYYLSILYMASYNLADRDNEPGVFGHGLFLRGTIPVMTWFEIEPIIFVSGWYIDKKHKFISVEGDPFYRVPFYFGLNLKKDFVFDNGIVLGLSLVNGLFLNEKNEIGIRYDQSLQFDFTYLVPVKQ >gi|343385870|ref|AEM21360.1| hypothetical protein, complement(815658..816290) [Brachyspira intermedia PWS/A] MSYIGNYLKAIVIVHGKSELQMCNFIKNKLRLNNIDIISKNNGKHSIQISSVMKRLNGKDINTLDNFKNTYNDYLEIKNHKTIIDKDFKIFIIMDTDDCNNDEEKDNFINKNMFKNYWAYDYILPIYNITNLEDVLIKAEIIDKNAIKNKKDKKNYIKIFPITKQDIESDIKQIEEFYKKLLKVKNISNMHKFIKFCLDNRHIHKKTNNK >gi|343385871|ref|AEM21361.1| conserved hypothetical protein, complement(816295..817611) [Brachyspira intermedia PWS/A] MFTYVKLKNYKSLVDFEVDLTSSKNNPKKMIIIYGENGAGKSNFIDSFFTLFDTLNTKIYKTAVDEFMSETSDDKKELEFFFNKVLKDNFKNLDTIIEKSKTIGSKDNMVLEFGFKLNGKNGVYYIETDNESIVKEKLEYVLDKNKTKYFELSNKDNYINTSLFKSDKYLNEIKDLVDKFWGKHSFLSILLFEQEDKSKKYISKNINNNIFEVIKYFSSMSIHIKNGSNIEKGKISIDKKFISIMDNSSIKINEKEKLNHTEKILNNFFTSIYSDIKKVYYRTEEKDDKLHYNLFIKKQIYGKIIDIDFKLESTGTQKLLRLFPLIISSMKKNNVVAIDELDSGIHDILTASILKSLFVDIKGQFILTTHNTTILESDIKKECIYIFNIDSEGKKILVPITDYEKEHPNINFRKRYMKGIYYGIPIVSNINFKDILEE >gi|343385872|ref|AEM21362.1| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase, 817755..819284 [Brachyspira intermedia PWS/A] MIKRALISVFYKDGILDFAKFLTSKNVEIVSTGGTYKYLKENNIPVIEVAEVTGAKEMLDGRVKTLDPKIHGAILAIRDNPVHMETIKERGITPIDMVIVNLYPFFEKVQDDNLKFEEKIEFIDIGGPTMLRSAAKSFKDVVVISDVKDYDLVKSEMEKGEVSFETKKYLASKVFNLTSAYDAAVSEFMFNSLESKEGKKLNYLNMSYALQEELRYGENPHQGASYYISTTDKGSMKDFEQLNGKELSFNNIRDMDIALKIVLEFDEAKKEYACSAIKHSTPCGAALGSSVLEAYNRTYECDPTSIFGGIVAFNSTVDEATAKELIKIFLEIVIAKDFTPEALEVLKSKKNLRVIKYKTNTNDKINLVKVDGGLLVQDEDNTLIEDYKVVTEKKPTEEEMKNLIFGMKVVKYAKSNAIVVIKDFMAKGIGSGQTNRIWACEDALERAGDGVVMASDAFFPFRDVVDACAKYNIKAIIQPGGSMRDQESIDACNEHGIAMVFTGIRHFKH >gi|343385873|ref|AEM21363.1| putative Rhodanese Homology Domain (RHOD) superfamily protein, complement(819388..819798) [Brachyspira intermedia PWS/A] MNNTLTLIIGLILTFIILSAVRKIIFNIRSKGKFKNINVNDAVSIYKNNKNIGLIDVRSYMEVQQSGYIKNSVNIPLDDSKFNEKMSKLDKNKEYIVYCASGSRSGTACMRMYKLGFTNINNLTHAGYFQLSSYLK >gi|343385874|ref|AEM21364.1| putative transcription activator, complement(819889..820548) [Brachyspira intermedia PWS/A] MKFSEMVWKRNQDLYNKIINTNFNKELMDGSLDKKKFAYYIEQDSLYLKYYSKALAIISSKIHNVDYALVFLKSSINSYIVEEEIVHKYFRDTFKFENTNKITTANLGYTSFLINTAHTEAFETAASSILPCFWIYNELGKYIKANAEVENNPYKKWIDTYADEEFSKATEYMIKILDNLYDNASDVVKEKMIAVFDIAFIWEYRFWNDAYNLDDFHNV >gi|343385875|ref|AEM21365.1| OppA, ABC-type oligopeptide transport system, periplasmic component, complement(820614..822221) [Brachyspira intermedia PWS/A] MTSKQKFIILLILFVFFISCKKQIKNIKDEITVNLGYELNTIDPALNDETYGYIYINHAFEGLLNKDLNGNIVGGVADKWEISDDSLTYTFHLRDNAKWSDGKKVTADDFVYSYRRAVDPKTASPLSYLMEYIKNAKDIIRGKQPIENLGVNAIDENTLTIELEAPTLYFTDILASGGVYMPVRKDIIEKYGDDWTWNPETYIGNGAYKMVERKPDELLAFEINTNYWNYTNQVAKRINFVLIADEYISLNAVRTGDVDFSINAPPIGEIENLIKENLMAVSDIIGVYYLDLNNKDKALSDKRVRKALSLAIDRNYIVSNIGYGKLIPAEAFVPPVVKGLEKSFRDESSNYIIANNYSNNVEEAKKLLVEAGYPNGENFPMLEVKVSSGFYTTVLEAIQQMWKNTLNIDVIVRTEESKITLPFRESGNYQMARTSWTGDYNDPLTMLQIMTSYSDINYGEFSNARYDSLIEFATTATNAQKRMEALKEAESILFDEVPIIPFIYRTDFLIVNPKLKNYVDEPLGRYKFNYAYLEE >gi|343385876|ref|AEM21366.1| Phosphotransferase system cellobiose-specific component IIA, complement(822692..823018) [Brachyspira intermedia PWS/A] MTQDYETFMEENVFPIIALAGESKSLAYEALRLAKENKFEESDKKMQEADKLLLESHQYQTDLISKEANGESFVINLLFIHAQDHLMTAISEKNLIKELIDILKINHK >gi|343385877|ref|AEM21367.1| hypothetical protein, complement(823039..824121) [Brachyspira intermedia PWS/A] MKELGISIYPFHSKMEDNKSYIDLASKYGFTRCFMCLLSVDRSKDEIINEFSDIINYAKEKGIKTTLDISPAVFKHLDIDYKNLDFFHKLGAWAVRLDLGFTGNEESLMTYNEYDLKIELNMSNDTNYLDNIMKYYPNTDNLIGCYNFYPHAYTGLDRTLFKSSMKRFKKYSISSSAFVNAKEATFGPWPVSDGICTLEEHRNMPIDVQAMELFALGVDCVFIANCYADENTLKTLYNMDKRLITFKAELVNSIPKEEKSIVLDMLHQNRLDASADVIRSSDTRAKYKGHNFKLFNAVSDIKRGDILIDSSEYGSYTGEMQIALKDLKNTGRTNIVGRIKDEYLFLLDYISPAKRFIIRE >gi|343385878|ref|AEM21368.1| Phosphotransferase system cellobiose-specific component IIC, complement(824164..825489) [Brachyspira intermedia PWS/A] MNDRIINYIENKITPIAAKLSNNRYLKSIKDSFDYVTPFLIVGSFILLIFNLPLKNENSFIYMSWYDNFSTTFSGHFIQIFNVSMGLLSLFVAYGIGYSLAGSYSLSSVTGGFLSLFAFLLISVKANTLSVAGDFTNIFLAEAGSNINVLDARFLDAKGIFSAIIGGIISIEIYRFLVSKKITIKLPDSVPPAIAKSFEIIIPIAVVGILFQIINIIIQKNMTMLTSNLIDNIMSPLLSKSDSLVLVIILLLIIHILWFVGIHGANVINAIISIVTLSNLALNQAALQAGEALPKIVAGEFFNVYVYIGGAGATLGLAISMALSKNEHLKSIGKISIIPGLFNINEPIMFGTPIIMNPILFIPFICVPIINAIIAYTVLKVGIVGKIIALIPWTTPGPLGALIASNFNIPAMILSLCLVFLSYLIYTPFINAYAKTLQDNK >gi|343385879|ref|AEM21369.1| Phosphotransferase system cellobiose-specific component IIB, complement(825525..825830) [Brachyspira intermedia PWS/A] MKKILLLCSAGMSTSMIVKKMQDKAKADNIDAEIEAASVSRFEELADSYDIFLLGPQVKYLKDELVKKANAKGKPLDVIDFKDYGKMDGAKILDFALNLTL >gi|343385880|ref|AEM21370.1| transcriptional antiterminator , BglB, 825985..827847 [Brachyspira intermedia PWS/A] MNVKYIKEILSSLSADSYITAEALSKQLNVSEKTIRTKVKEINYELQKLNIKIESKPRYGYKLICDNYDNFKSIDLISNINNDMDYRIKIIFKYLIELDSEYIKSDDICDSLDISKTTLTNILKIMEYNLKYHNLKLERRPNYGIKLIGNEFDIRNFIICNYLNDFLYENNMNEKLIGIIINFLNKYEIKFSEINLENFIQYINVSINRIKNNKFICDCENDIVKDIAEEIRLSEELINQIQNEIDIEFNDTEILFIAIHIASKNLFSINENYNSVIQDKFSDIIDKMLDMVYKNLKIDLRNNFNLILLLNQHMIPLDIRIRYNIFQKNPMLNDIKNNYSLSFLLASESAAILKDYYNKDISEDEIGYLALLFQIGLEETVESINKMNILIVCGSGKTTSNLLVTKYRKEFNDYIENIYAADLIGLKEFDFSKVDYVFSTVPINLKLPVPIVYISNFLKSDDIINVKNTFESLNRNIILDYYKEEMFTTDIKGDTKEEIIKNICEEIKKYKSIPDNFYELVMKREQLAETDIGNLVAIPHPIEVVTKDTFVYVAVLDKPILWQKNNVQVVFLISVSNNNDDLKNFYEYTINFLLNENSVKKLIENKTFENLIFLIKSNSE >gi|343385881|ref|AEM21371.1| Phosphotransferase system, putative phosphocarrier HPr protein, 827860..828126 [Brachyspira intermedia PWS/A] MTEFKYTINNISNIHARPLSELAKIAKDSNCEVSVKKGENLKDLKKIIGLIQLKLKVGDEVDVIINGNDDDLENTAKENIYNFFKLNF >gi|343385882|ref|AEM21372.1| alginate O-acetylation protein, 828360..829718 [Brachyspira intermedia PWS/A] MFWNPKYALLMGTSTIVTFLSGILIEKLKYKRIVVAFSFIINIAILVFFKYFDFLLLNINMLLSALNIQLIEKPFDIILPVGISFYTFQALSYTIDVYRGEIKSEKNIIKYALFVSFFPQLVAGPIERSKHLLGQIQNMDKIKRFDYHRITEGLILMLFGYFQKMVIADRASILVDTVFNRYYIYNTTELALSAILFAVQIYCDFASYSLIAIGTAKVMGIDLMENFNTPYFARSIKEFWGRWHISLSTWFRDYLYIPLGGNRCSKIRRSFNILVTFLVSGLWHGANFTFIAWGAIHGICYLIEDITSKFRNNVLNKLGVKVQSFSFKFLEVIITFIIVDLAWIFFRAETIHDAFYYIQRMFTKIDLWRLFDGSLYKLGLDNFEMNILIISLIVLFLVDLIKYIKKETIYEFLKNQCLYFRWAVIFFLLFFIIIYGKYGAGFDPKQFIYFQF >gi|343385883|ref|AEM21373.1| hypothetical protein, 829730..830485 [Brachyspira intermedia PWS/A] MSEVRKNYYGSLCTEMYEILHEKAPEDELNFYLSYAEKGKKILEPLCGSGRFLIPFIERGFDITGIDMSNEMLKKLKLKFPDAKTIHTDIMKYDPKEKFDYIFISSGSVSLFTNIDICKQILIRIKKWLLKTGKFVFAVDTIKNRCIDDNDYNIAVSVKTKENFEIVLKSKNYYEEKTQTQFSPSIYEMYNNTELIQSEFMDFQTHLYKYGEMEQYLKEVGFTQVKTFSSFEKEIAVNDQCDMFLFECSFL >gi|343385884|ref|AEM21374.1| acetyltransferase, RimL family, 830547..831101 [Brachyspira intermedia PWS/A] MKHKGTIQLESERLLLRRFKTEDAKDMYNNWASDDEVTKYLIWQTHDSIDKTKLILTEWTNQYCYKDFYQWAIVLKENNFLTGSIAVVDMNDSIDMISIGYCISKKYWHKGITSEALSILIKFFFEEVEVNRIEAKHNINNPNSGKVMLKCGLKKEGVLRSIYKDNTGLADAAIYSILKNEYFN >gi|343385885|ref|AEM21375.1| hypothetical protein, 831171..832601 [Brachyspira intermedia PWS/A] MIRNTIKIICFIAIFITLLWFSSRVLRFKNDNGIYQGDSFYEQRTNSIDVMFMGSSHVHYNVNPAILYNEYGIAAYNFTSGSQPIWSTYHYLVEVLKYQKPKLIALESYIVAASRTNVVDYQIVAATYALKWSKNRVESLKVTAAERFDEFINPMYRYHNRYKDLKDEDFIPYANNYNHYKYFKGYSFHNKTFPVQRPDIENIKDTLPLLEEQETYYRKILELAKTNNIPIVVIASPFPMTDDEARHFNRVGEIAKEYDVPFMNFNHYYDDYDLDFWTDYNDAGHLNYKGVQKYTSFLGKYLKDNFVLPDRRGDTNYDTWEKNALYEYNKVYDMGLRDIENINDYMTKITNLNDYTIVINMLGEYSTNDNIVKGLYSNFNITNEMYTNNVSYVIDKNKLVFSSMGATNYLYHKELNKYNDLVIDSGNRILISRSNLRKTTNGVNIIVYDNITSEVVDFFDLPYTNDAISEVIERDY >gi|343385886|ref|AEM21376.1| hypothetical protein, 832864..833442 [Brachyspira intermedia PWS/A] MVLNEASKISAENIIVDISDVNFQNEAIPASMFTGNPDNKITILNFVFPENKIKTIKTFAFHGLHNNLKELTIPDSVITIGDRSFQLNYVLEKLTLGNNVQTIEEDAFLYSTALTELTIPASVKTIQDHAFGSSPNLSKVIYLGTSPNSINFGKDIFTSTKLTTLIVPNAENINDSAWDTFLGHNFTDVRKQ >gi|343385887|ref|AEM21377.1| hypothetical protein, 833532..834491 [Brachyspira intermedia PWS/A] MIKKFLLIFISALILVSCSASVISPSNNGNNSGNGTEEGGDGGSGGDGGGTDIPWTEIEPPLMPPYPILDAEAIKYGIDISQEDNLIKEQIKTRLEECKKEGREYKIIFTGTPKAEYSQQSSLAKFVLDAANDLGIYYKNIEIDISKIYFNERKVKSSMFKGFPSFADCTITFKFPENSIRVIEGNAFSLFSKHFKEIAIPDSVIGIKAAAFQKDSSLEKITISENSKLEYIGELAFSYSKVKEIVIPASVTSLGRKPFGESLTTVTYLGTKPNTISNNGDVFEDCVSLTTLIVPNAENEKDEGWKTFLGHKFTTVKKQ >gi|343385888|ref|AEM21378.1| hypothetical protein, 834601..835620 [Brachyspira intermedia PWS/A] MERVMIKKILLVLVSVLVFVSCSNNTTSPDSSNNGDNSGVTPPIDNEEQELIKKYGIDISQEDAVISQKIEENLRAYFAEKNSYRVILTGTPRSYKESLSSLIAKVASGFQNIDNIDIDIRYINFQGDTISGDMFSGPTDNGNITFNFIFPENKIKTIGDKAFSFLSNLKEITIPASVTKIGVEAFRNCDNLVKLNLKNGLEVIDNMAFLQVPFLSEVIIPDSVKTIGDQAFANDTIQKLQLSSSLETIGSDAFMNLEIEELIIPASVKTIGNQAFAYSFTALKRVIYYGDSPNIINYTGNVFEGCFSLSTLIIPNAENDKDPKWETFLGGSFTDIRKQ >gi|343385889|ref|AEM21379.1| hypothetical protein, 835787..836644 [Brachyspira intermedia PWS/A] MLVFVSCSNNTTSPDSSNNGDNSGVTDPTEEELLIKKYGIDISQNDIEISKQLEQNLKAYFQEKGSYRVIFTGTPKDYGDQQSGNKSLYILTLEAASKLNITMNIELDLKNINFQDGSIKAFMFSSFDDKYKNIVISFAFPENKIKTIEKSSFFGLYNTREITLPDSVITIKESAFMYSPSIEIVTLGNGLQEIGERAFMGVDNLKEIIIPDSVKSIGMQAFALSQQLTTLTYLGTNPNNINHKGDVFLGSTKLTTLIVPNAENDKDEAWKTFLGGNFTTVTKKL >gi|343385890|ref|AEM21380.1| FMN-dependent alpha-hydroxyacid oxidizing enzyme, complement(836808..837821) [Brachyspira intermedia PWS/A] MTYKEIIEVAKDCMGFCKACPICNGKVCKNSMPGPGAKGIGDVAIRNYDKWREIRLNMDTICSNEDVDTSFELFGKKFKYPIFAGPVGAVQLHYGNKYTEEEYNDILVKSCAEAGIAAFTGDGTNPNVMIAATTMIKKQNGIGVPTVKPWNIDVIKEKMKLVADSNAFAVAMDVDAAGLPFLKNLTPKAGSKTVDELKQIKEIAQRPFIIKGIMTVKGAKKAVEAGADAIIVSNHGGRVLDQCPSTAEVLPEIADAVKGKIKILVDGGIRNGTDILKAIALGADGVVIARTFVIAAYGGGEEGVKSYAAQLGAELEDAMTMCGVHSLKEITRDVVRL >gi|343385891|ref|AEM21381.1| hypothetical protein, 837991..839844 [Brachyspira intermedia PWS/A] MSKISNYLLSKHIEKCKISLEAFEEREIPDLKDDFKKEAEKVICEANNFLNSIDPFNYSDFDDFNRKAEKFNDELNRILETFYIKEPDELYTYNRFIEYFHYDKTMFNDENDEIDINDLHTLDEYFDCNTNGVALNNMGSYQYAIDKYSEAIDLIDYYALAYYNRGLARNNLGFFKKAIKDYDKAIELSKNYKDAYYNRGVAKNHAGLHKEAIEDYNKVIELDNKNIDAYNNRGASKNYLQLFDEAMKDFNKILELEPNNYCAYSNRGNSKNDLGLYKEAIEDYNKALKINPNFADAYYNRGNSKKELGLFKEAIEDYNNAIKWKPNDINSYMNRGNVKYDLELYEEAIKDYDKIIKLDHNYVDAYYNRANAKRELGLYKESIKDYDKAIYLNPNYSDAYNNRGLAKSDLGMYEEAIKDYEESIDLCADNPEAYYNIGSAKYDLDLLKESIKYYDKAIELRPTYSEAYNNRGLSKNDLGLYKEAIKDYDKSIELNPNDSNTYNNRGLTKYTLGLYKEAIKDYTKAIELTPNYTNAYGNRGSAKDELGQYKEAIKDYDKAIELEPNTAYLYNDRGWVKKNAGLYKEALKDYKKALELDPNNKYAMSNIENLKKEHGLK >gi|343385892|ref|AEM21382.1| putative TPR domain-containing protein, 839870..842323 [Brachyspira intermedia PWS/A] MNDNIKELLDKAKEAFENREYEKSIEYIDKVIFYNGDSYDLYHNKGLSKLNLGLYEEAIKDFERAIELGDDGETVYYDRGLAKLYLSFYGEAIEDFNRVLQINNNDIDSRVNVGLCYLYMKNYKEAINIYDEVIADFPDNINSYNNRGLCKFYLSQFEEAINDFNKVIELDKNSTASMAYNYIGLCKYHLDEITEALKYYEKAIEINPNLINAYHNIALIKHSGEFDDEALSYLNKALEIDPGNLETYLKIYSIKLDLELYDEANEYLNKILEMYPDDLYVYDRIGNIKIDAGYMEESLEYLKKALEINPNFIDAYYDIAFALHKLDLNNEALEYLEKALQIYPNSADTYFKMFLVKRALRDYEGALSCLNKILEIDNTDVVIYNEIALIKVELELYDEALSYLNKALDIDTNNAEIYNSIGLVYYYKKDYEEAIKNFNKAIELNTSMASAYYNIGLAYYEMHDYENSIQYYNKALEINPQYASAYINLGLIKHNLGNYKEAIDYYKKALEINPDYSLAYYNIALAEMSLEDYKNSLEDFNKALELGYDEAEIYINIGLIYSRQAIYDKAIEYYNKVLEINPNKVNAYYNIAFCLSNMDKYEETLEIYDKVIRMYPGNFDVYYERGYTKYRASKYEEAIRDFDIIINVNSKHYNAYYYRGCSKKYLKNYDEAIKDFDKAIEYNANNSDFYSERASCYDYLNKYRESIENYDKAIELKDDDWFLYILRAKEKFLLSKETNSENKTNDKKSFFNKIISKIASSKNYTDLEKSALNDLEKSYKLALEDEFYLMVFKDIIKDEFTNIDLAAEFCKDNNITL >gi|343385893|ref|AEM21383.1| TPR domain-containing protein, 842948..844210 [Brachyspira intermedia PWS/A] MATMTNFLFSQHLKESKNKLENLQKELNKCVEEFNDFLNNIDAENYSDFDDFNDRAKAFNEELNKIMSDKQNFIVSFTNIVDNKKEVDIDRLNNLTDYHDYNSKGIYKSANGEYAEAIKYYDEAIKLNPNMADAYYNKAIAKTKLGLLKEAIEEYDKAIELRADYTYAYYNRGLLKSDLGLLEEAIKDFDKALSIDPNLFDAYNNKGLLEDELGFSKEAIKDFSKAIKLNPNYALAYNNRGIAKDNLGLYEEAIKDYDKAIKLNPNYALAYNSRGNAKDNLGLYEEAIEDFNKAIKLKPDNTDAYNNRGNTKYNLELYEEAIKDYDKAIKLDPNYAFAYNNRGNAKDNLGLYEEAIEDFDKAIKLKPDYADAYNNRGLTKENLGLYEEALKDYKKALKLDPSSECARENVKRTKEEYGLK >gi|343385894|ref|AEM21384.1| magnesium-translocating P-type ATPase, 845272..848016 [Brachyspira intermedia PWS/A] MKILFIGVDIMKKILENKNKLILSALNNTDKVLEVFNSSLEGISEKEADKRLKEYGLNKIPHKNKKTILKRIAEGFINPFTLILFALAIISIFTDILIPFFKNEEISFLTVIIISTMITVSGLIRFIQEYKSDNASEKLLNMIKSSSIVLRENIKKEINSENLTVGDIVFINAGNIIPADIRIIESNNLTVSQSVLTGESEPLEKNNSVCNEELESVTDYSNIVFMGSNVISGDAKGIVINIGKDAFLGDIANELSNINEIDTSFTKGINSVSWLLIRFMSIMTPVVFFINGFTKGNWIEALLFAISIAVGLTPEMLPMIVSACLAKGAVSMSKQKTIIKNLNSIQSFGAMNILCTDKTGTLTMDKISLKHYFDINGNENKNVLDLAYLNSYFQNGYRNVLDNAIIEYVEHNEKNFNNKELENYIKINEIPFDFIRRRLSILLKENNNIKMITKGAFEEMISICSYVYDDEKVSKITELQREELNKKINSLNDRGMRVIALAVKDIKINDENQLQDLEEIKKLENEMVLVGYLAFLDPPKESSYEAIKKLNEYGVDVKILTGDNEKTTINVCNKLGININGILLGNEIDKLNDDELKIKAKKANIFAKLYPHQKSRIVSVLKDDDNTVGFMGDGINDVLAMKMADISISVDSAFDIAKEAADIILLEKDLTVLEKGIIEGRKTYANMIKYIKITASSNFGNMFSVLMASILLPFIPMQSVHLIILNLIYDLSCTSIPWDNVDKEFLKLPRKWDASSIGNFMCWMGPVSSIFDWSTYLIMYFIFCPLFVSNGILYNKLGNYYNGADLANIKTMYTSMFQSGWFIESICTQVLVIYMIRTAKIPFIESRPSKQVFLLTFSSIIILSIVPFTNLGHHLGFVSLPKTYFIFLVPCIFAYILLVTLLKKVYIRKFGELL >gi|343385895|ref|AEM21385.1| binding-protein-dependent transport system, membrane component, 848642..849484 [Brachyspira intermedia PWS/A] MHTVPGGPFVGEKPLSKVALENLNRKYGLDKPLIVQYGNYLNNAIRGDLGTSLTKIGQSVSGTIVRAFPVSFRLGIFSMFISTTIGVLFGIVAALRHGKFVDRAVMVAATLGIAVPSFVVATVSIIIFSVKLKLLPAYGFDSFAQYIMPGFALSFSSLSFMARLMRSSMLDVIHQDYIKTARAKGISRSIIIFKHALRNAIIPIVTYIGPLAAGILTGSFVVEKIFNIPGLGRYFVESITQRDYPTILGVTIFYGAFLIAMNFLVDLSYGIIDPRIKIQE >gi|343385896|ref|AEM21386.1| binding-protein-dependent transport system, membrane component, 849520..850503 [Brachyspira intermedia PWS/A] MENSLDKSLFVKATDEEKASAEVKRESVTYWQDAYRRFKKNRVALVSIIVIAIIAILSIIIPMISEYGYAQINRGVENSLPTLEHPFGTDTLGRDLLVRCMIGARISLLIGIVSATLVVIIGIVYGSISGYFGGLTDSIMMRIVDIISAVPTLLVVVLLSVVLKAPMDKLFLQNESLRGIGLLGPGLFSIFIVISLLYWTNMARMTRGQILALKGQEFVTAARALGTPHSRIIFKHLIPNAMGAIIVSAMVQIPNAIFVEAFLSFLGLGVSAPMVSLGSLTSNAVSGVYSYPYQLLFPAALISIIILCFNLVGDGLRDALDPRMKNR >gi|343385897|ref|AEM21387.1| oligopeptide/dipeptide ABC transporter, ATPase subunit, 850516..851493 [Brachyspira intermedia PWS/A] MENGHLLEVKNLSVSFFTPLGEVKAVNNISYKLDKSKVLGIVGESGSGKSVSAYSIMGLIEEPGKIMNGEILFEGTDLIKLSEHEKKKIRGDSISMIFQDPMTCLNPVYTIGNQLMEALTTHQKISKTDAIERIVELLTLVGINEPRRRIKQYPHELSGGMRQRIMIAMALAGDPKILIADEPTTALDVTIQAQILELIKDIQKKINMAVILITHDFGIVADMADDIIVMYGGGIVERGTVFDIFERPKHPYTLGLLKSLPRIDIKQDRLIPIEGTPIDLLNMKAGCPFSTRCEECMKVCIDNKPPITEFEKGHFSACWLHQMPN >gi|343385898|ref|AEM21388.1| oligopeptide/dipeptide ABC transporter, ATPase subunit, 851558..852520 [Brachyspira intermedia PWS/A] MAPLIEIQDLKQHFKIKGGFFGRNIQTVKAVDGVTFTINKGETFGLVGESGSGKTTLGRTLLHLYKPTSGKIFFNGEEVNKENYRNYAKKMQIIFQDPYASLNPRMTVEDIIGEALDVHKLYSTKDERREKIINLLKLVGLNAEQAQRYPHEFSGGQRQRIGIARALAVNPEFIVCDEPVSALDVSIQAQIINMLYDMQQDMGLTYLFIAHDLAVVRQISKRIGVMYLGNIVELTDSESLYTKSLHPYTQSLISAIPISEPSIAKTKQRIILSGEIPSPINPPSGCKFRTRCPKAEAICAEKVPEFREVETGHYCACHLV >gi|343385899|ref|AEM21389.1| hypothetical protein, 852835..852972 [Brachyspira intermedia PWS/A] MPNNAEMIAGDDKLRVYRYIEKHYINANYIFFLKNSILYKYYSLK >gi|343385900|ref|AEM21390.1| OppA, ABC-type oligopeptide transport system, periplasmic component, 853052..854656 [Brachyspira intermedia PWS/A] MKKYFYLVFIISVFIFSCSNKSNIEDNTVYVNLGAEPKTIDPALNITLQGSTYVTHLFECLTTKYKDIAIQPGAAESWDISEDGLTYIFHLRTNGKWSDGKPLTAHDFEYSWKRVVDPDTASEPSYLFEPILNFSNVNGGYMPVDEFGIKAIDDYTLEVKLEYPTAYFLELVNLPVFSPVRKDMVEKDPDNWTRNPKTCIGNGAFALYERKPDQSITVIKNTNYWGADTIVAEKIKFVLMDNPNSAVAGVKEGSLHFSDQFPYQDIDTLREEGYIDTATRIGTQYYALNTTNETLKDKRVRKALSLAIDRNYIVENVLKSGKPAGSLVPWGVTDVEGYFRDNAGEYISTNKEDYKKNVEEAQRLMAEAGYPNGEGFPVLEFFLTFSNDIPMFEAVQNMWKVNLGIDVKLTQMEFAPFIHAFRTERNYTMAAASWTGSYNDPTTFLGMFVSYSYKNHSLFTNKAFDDAIITASRTIDQNIRMRELHKAEKILIEDEAVIIPIAYFEPAVLKSPNLKDVFYIPFAQYKFSYSYLEK >gi|343385901|ref|AEM21391.1| transcriptional regulator, MarR family, 855028..855171 [Brachyspira intermedia PWS/A] MKEIVFEDIRKNNEVMFSNMSDEEKETLVFIIQKLLSNIQDRDNTFN >gi|343385902|ref|AEM21392.1| hypothetical protein, 855284..856003 [Brachyspira intermedia PWS/A] MHINEEDFLYAKEKGLMFDFSKEIIKYNDLIKNIYILIKEIDFNNTVKAFLCSLSSRAVHLRSFISSYYLSKKMMSYDFSNTENIEKEFYNKYNIMIDDFHLEYQNVYNFEKYKWGGVRLEHLSYIYFDLREFSKIDFEFNPTKEDINIFNAILERIDSYNIKNDSANKMQAVLKDILKSSKAERIIFLEILAYLDILEAKEEREYRDTELSEKLMNWRGGDSYNKINAKNIFGNYLLI >gi|343385903|ref|AEM21393.1| hypothetical protein, complement(856000..856806) [Brachyspira intermedia PWS/A] MMLSYNSFNVMDTDSISDFFTSFGDTFMWFLILNTGSSTILGILFYGLFIVGFSIAALFSSSTDIGFTIAKIIICLIIFLYGFVPFIAYKIYNSTKSIISMYISRFLLVINLFTIFIMMFLMIPYESRPYDNRFVYILYNIILSLTIINLMFTRMEKKSNIFIKAMYLIVPIFALLFDILTITATIYRIVNYGLTPNKLTLIILNIIFLIHLILISINTIKSFISSFQNREDNNTLNIVIDNNPIMFVYVYLVFSVFVCFVMPIMYIN >gi|343385904|ref|AEM21394.1| putative histidinol phosphatase-related protein, 857346..858203 [Brachyspira intermedia PWS/A] MYNNIENYFYEFYKKLEKDSVLMALDFNMDNTSSENSKLYTIDKSYKVIKNDITNILSGYLFNDNLLVHNGKLYNKSEIYDNKEYINKLINEAFDKNILYGIPSYFADDTKKINKALFLDRDGVLIEDVGYIGTTDRVKINSDFIDIVKHANDKGYITIVTTNQAGVSYNYYTNEDVNNVHKYIYDEYKNKGAIIDDFYYCPYHIKGHVEPYNIVSMLRKPECGMHLLASKKYNIDLFNSFMIGDRDTDIVKIPYLRTLLVATDVYDIENKDNIVKIDDIYNIIK >gi|343385905|ref|AEM21395.1| chemotaxis histidine kinase CheA, complement(858293..860689) [Brachyspira intermedia PWS/A] MDDYIKSLLKDFFEEAFEMLDRLEQNILILDNERNNVDAIQEIFRAVHTLKGSAGAVELVETQKYAHRFEDLLDLIRNNKIEVDDATIDVLLKGIDILKDLINTASEESEYSGDIEAEIKKLEDFKNMKLGQGPAPSSGDAPAAAPSGNAPAAPEAEKKINKYELLPNDSDLLGIIRDNVEENVKTKLVHVSFDPESPMRTVGGVQVFVALKDVGEIMGSIPPLEALEGDEFYEHVTYILAAIKEDQTIIDAITLPDVTKEISIEEIILEEYEKFLQEKKQKEEAQKAKESSASSNAAKKPDAAKGGKDHKVERQSSFLRVESDRIDAMMNQVGELVTNKSSYVQYDDDLTSYQKIIGTGINEVKRYYRDSIVQILRKFEEHLQKKEAKEIRNTYIDGFNNKLNEFVKMEEEFKNTLDRFRNSYQLLTRVTNELQETVMKIRMLPIAQTFNRFPRLIRDLSRDLGKEVKLEMYGEETELDKSVIEVLVDPLVHIIRNAMDHGIELPEDREKAGKPRTGTVVLSASHEGNLIIIKISDDGKGMIPQKIFESAVKKGLVSADAKLSERQMLEYIFAPGFSTAAKITNVSGRGVGMDVVKKSLEKINGTVGIETEWGKGSTFFLRIPLTVAIIQALIVDAEKEYYAVPINSILETVKIDVKDIQELEGIEVIKVRDDVINVLSIKELFRLPSRYNNIKSYYAVILSSEGKKVALLVNNLIGEQDIVIKTLKDNITKSEGLAGATVLGDGTVSFILDIQTIVSLGTKRIIERGKVNNNKGNKNDLRSFIEKLKNNEIPEIQQ >gi|343385906|ref|AEM21396.1| UDP-glucose 6-dehydrogenase, 860843..862150 [Brachyspira intermedia PWS/A] MKICIIGTGYVGLITGACLAEMGNYVICVDNDEGKLKKLKNGITPLYEPGLEELIVANVSEGRLEFTDDLSYAVKESIACFIAVGTPSGDDGSCDLSFVLSVANDIGKSMNGYKVIVDKSTVPVGTHKLVEDEIKKHYSGEFDVVSNPEFLKQGAAVDDFLKPDRVVIGSNSEKAIDIMRDIYNPFTRTGNPIIIMDVRSAEMTKYAANAFLATKISFANEIANICEKVGANADLVRIGMSSDRRIGNQFLFHGLGYGGSCFPKDVQALIKTASDYGIDSDLLKATHQVNVNQRKIFVEKILKYYNNDIKDKTFALWGLAFKPRTNDMREAPAITIINMLLEAGAKIRAYDPKAFDNAKYIFGDKIYYAENSYDALKNADALILVTEWNEFRRPSFDKIKELLKEPVIFDGRNQYDKNRMKERGIKYFSLGVADN >gi|343385907|ref|AEM21397.1| putative phosphoesterase or phosphohydrolase, 862190..862672 [Brachyspira intermedia PWS/A] MPANRKKLFNDYESMHDCLVNNWNNKINKEDDVYIVGDFSNDKGYLKTTELLKSLNGNKYLIKGNNDKFLDNDKFDRKLFKFVKDYYVLDIKDYGNIIKKIVLFHYPILEWEGYYNNTMLIHGHWHKDKKYHHLAFNVACDIHNFSPLSINEILEMVLNE >gi|343385908|ref|AEM21398.1| hypothetical protein, 862665..863840 [Brachyspira intermedia PWS/A] MNNYKDILLKRLHTTINHENEIENECIKFLSYDITIEPKIIQLEKKKSILCTVYFYVKAPLFDNVFFESSSSIASDEYKAIELSSDNFVYCALQGILDFLSGMHHHEIETSILGNKKVFTVCESPILGLGNIENSIDNKEDFYNDYIEFDEKNGYSSFLWNAIYKEVPFLLANNRVSFIKTYAAKMPNDDIIVECTINNIQNKTLENCVQNEIIKWDNNGEFFSIKQFFFILQSDTTYIKYPYTKEEIEYFVMEYVLEFEKCGFNYDYFIKNIKNVISDDSIREEIMNFIPEICAEYAFKDAVFNDRVDVNVGNNHYNILKTQFTSYKYIEDSLIDGFSNKIFKKETFNELVHISNSYHIIYEAMQNDNNIKMNDIFVSVAFNFSNEYKFV >gi|343385909|ref|AEM21399.1| hypothetical protein, complement(863844..865844) [Brachyspira intermedia PWS/A] MFFTNKFFYQKQKEILIAFIKRAIDFLPSVLVGLFIMVLSTRLFGRENATIGVISIFICALMRQSFTIESFPAVAFRILLLGFLATIAEQNLFFTITLNFIVPFSIVYLLSDDFVPRNYFIYGFAYVLLQAYNIPISDIHLRMEAILTALLIIFIFLVLNRFLTRHKLSNNLACKGIEAINKKISSLYNKTCSLNKKDDLFPIINGYTTAIYVDTLKRHNTMNNRNINHFQLVLFLEEINLLIDKEHQNIINFTDKDSEYFFMLSKILDRISNLLKKDISKHEKEYNSVMCAINYFNDNYSLSNEKSNYEWIYTISKLKNILHNMFENKKDEFEITRLFNLKFIRLKKEFNINKCHFRFSLKMGIIMCISFTIRYFLPDEIAIRGYWLPILSYIMLYPFYEEQKHNLKINVLGNFIGVFIFSVFFRYIPYDMIIPAIGVCFLLSLSSVNDFLKKIYGTISALISSFPYMPKLMSASSRVGFIIMALSIVWVFDHFIIRTESHKGMVDKISELIEIDTIIINQMRKAINNENTSQYLYEILLKAYMIKNNIIVHEKNQTRYKGTPITDSLIESNRKFIVEAEQLIHLMKKYNRPEDKQNILIFIENISNTLENTAKLFKNEINDYNSEEKKRNIIKTDSYIFYRLENCFDSINSINNSIKNNIDNIL >gi|343385910|ref|AEM21400.1| hypothetical protein, complement(866045..868054) [Brachyspira intermedia PWS/A] MFFINNFFYQKQKENFLSFIKRAIEYTPSIFVGLLVSAISFKFYGKENASIGPICTLICALQHKSFSIDNFQILALRVLLFGLLATIAEQNLFFIISFNFIVPFYIVYFLSDDFKPKNYFIYGFTYVILQSYNVPMSRIYIRIEAILTGLTIVFIYLAINSFFTKNKKYNDFSYRGIKSINNKLLTLYNKACPINKSEDIISIINEYVSEIYMDTLKRNNTMNNRNITHFKFILILEEINILIEREYENLYKFTKKDSEYFIMLSKILERISRILKHGIYKHESEYNIIIKMINDFNSNYFLSNEKSYYEWLYVIIKLRNILYSMFENKKDDFKITKSFNFKLMSLKKELNIDKCHFRFSLKMGIVMCIAFTVKYFLPDQIATRGYWLPIISYIILHPFYEEQKETIRTHILGNFIGIFIFAILFKYIPNNTIMPAIIICMVFSISSRNQFFKKIYSTISALISSFPYMNKLVSISSRITFMMTAISIVWVFDNFIIRTENYKGLIDKISELIEIDTMLIDEMEKAINNEVGSEYLYEILLKAYMIKNNIIVHEKKQTRYKGTPIKDSFIENNREFIVESEQLINLIRKYNRPEDKKNISIFIKNISTILENTAKIFKNEIDDISNNIQNNNFNKKSNSYLIYRLEKCLNSINAINVSIKDNMDNLNIR >gi|343385911|ref|AEM21401.1| hypothetical protein, 868200..868700 [Brachyspira intermedia PWS/A] MPPVIIEHEEYPSVVVIEYNSIYRNELQNFIHNIKIKDNKEEVFVEPYFNKILHTNNTNIGLLTIDGRINGYYYINKDCVLKYIYMNYPYRRNGFAKLLLTHAIKANPNIQFEKNANQAYTRLISSPIFEDVLKGNSSGAFDNSGSMDTFEDLSGGGSKEGELTLF >gi|343385912|ref|AEM21402.1| hypothetical protein, 868832..869116 [Brachyspira intermedia PWS/A] MHTAMNITISVDDNKIYGKSAINDYWANCKIDGESISIDMIKTTRKTDNAEKRRAEGDYLSILQTAYSIKIEGNRLIIYTRFIDEPLIYEEIKD >gi|343385913|ref|AEM21403.1| hypothetical protein, complement(869177..869332) [Brachyspira intermedia PWS/A] MEYDNNDPFRREFNKKETRKRTLKSWIFLGFIVMIFLIAEFVRYIASLIYR >gi|343385914|ref|AEM21404.1| beta-methylgalactoside transporter inner membrane component, complement(869347..870369) [Brachyspira intermedia PWS/A] MDKNKINIKTIKSFVLNNAIFAALLVILIGIIIKEPTFFRLSNFLNIFAQASTRMIIAVGIGTLLVTQGNDLGAGRAVGLAAVVSASLLQSPSNPTRMYPDLPMLPVILPILLVMLILMIFGLINGFIISKLYVTPFIATLGMQLILYGVTSTYFDRPPYGAQPIGGLDPRFTNLAQGGIKLGGFTISYLIIFAVIITLIMWVIWNKTKLGKNIFAVGGNPEAAAVSGVNIPLTLMIVYTMAGALYGIAGSLEVARVGSATNNLGNGYELDAIAACVVGGVSFSGGIGSIIGIVSGVLIFQVINYGMSFVGISPYMQYIIKGAIIIAAVAVDTQKYLKKV >gi|343385915|ref|AEM21405.1| galactose/methyl galaxtoside transporter ATP-binding protein, complement(870391..871917) [Brachyspira intermedia PWS/A] MKNKGFNMDNKKIVLEMKGISKSFPGVKALDDVQLTVREGEVVALMGENGAGKSTLMKCLFGIYRKDEGHIFLDGKEVNFISPKQALNNGVAMVHQELNQVRQRNIQDNIWLGKYPTKYGVIIDEKKMYDDTKAIFDDLEIPLDPRTKVSTLSVSEMQMVEIAKAVSYNSKILVLDEPTSSLTEKEVAKLFKIIRKLQSRGVGMIYISHKMEEILQISDEVTIMRDGKYVATTPSKELTTDMIIKQMVGRDLTNRFPEKTNVPGEDILEIKDFTAFYQPSLKEVNFSVRKGEVFGIAGLVGAKRTEVLESIFGMRTLSSGHVFKMSEEVNNSSTRKAIKNGFALVTEERRQTGIFGMLSINFNSTIANIDHYKNKFGFLDNKKMQEDTKWVIDSMQVKTPSEKTAIQSLSGGNQQKVILGRWLLSKPDILMLDEPTRGIDVGAKYDIYRLIIDLATVGKAVIVVSSEMPELLGITDRIMVMSNGRVAGIVETKNTNQEEIMALSAKYL >gi|343385916|ref|AEM21406.1| galactose/glucose-binding protein, complement(872010..873035) [Brachyspira intermedia PWS/A] MAALFIMSSLFVVSCGGGSSSSTTTDGPTIGVTIYRYDDNFMSFYRRNIETRISGKANLIINDSQNNQAQQNDQVDVMIQKDSKALAINLVDPQAAQTIIDKAKTKNIPVVFFNKQPSAEAMASYDKTWYVGTTPEESGDMQGKIVVDTWKANPTWDKNGDGIIQYALLKGEPGHPDAEARTSHVTLYVTNNGLKVEKLEEQTAMWDTAKAKDIVDAWIQKYGDKLEYIFCNNDAMALGALQSVQALGYNKEGDTTKFIPIVGVDAIPDMINEIKKGTVVGSVLNDPVGQSQALVDITLNVAAGKDPLDGTTWTLDEVKAVRVPYVPITKDNINVAEEAYK >gi|343385917|ref|AEM21407.1| galactose/glucose-binding protein, complement(873343..874371) [Brachyspira intermedia PWS/A] MNKAIVTISSILLFISLVSCGNSSKANNEIEVGITIYRYDDAFISFMRRNIETMLNGKAKFIMNDSENDQVKQNDQVDAAIQREVDALAINLVDPASASFMINKIKPTGIPVIFFNKEPSKEDMMLYDKAWYVGTLSEESGNIQGDIVVKAWQENPAWDKNGDGKIQYVLLKGEAGHPDAEARTERIKSVLTNNGITIEQLDEQTANWDILQAQTAADSWVEKYGNSIEFIFSNNDAMALGALKSIQKQGYNIGDSNKFIPIVGVDAIPEIIEEIKKGTVVGTVLQSPKDQAKAVVDMVMNAANGNDVLTGTEYKLDEVKAVRVPYRAITLENINDAAEAYK >gi|343385918|ref|AEM21408.1| galactose/glucose-binding protein, complement(874456..875472) [Brachyspira intermedia PWS/A] MKRFIILLLVLLSSSVLLYTQKKTNSIGVALYRYDDSYMSFLKQYIEKNINRNTSLLMADSYNSQSTQNGQIDMFLQKNVNLLAINLVDKSQAQKVLDKISINNKPIIFFNREPGLEVVKTYDKVWYIGGISEEAGSAQGRVIVESWKDRMNWDKNEDGKIQCVILKGDLNDTDTIKRTEYMKKYIASNNIKLNVLEEVSAMGRRDEAAKVMKTLISKYGKKIEYIICNNDNMALGALDTLREFKYNNSSRMLNYVPIIGIDGIPECLEEINNYGIFATVMQNPQIQAQTLCSVSSNIISGKSPLDGLHFTIYNDKYIVIPYIPVNKSNIDTAIKIYK >gi|343385919|ref|AEM21409.1| 3-dehydroquinate synthetase, 875679..876752 [Brachyspira intermedia PWS/A] MDFNAMNKVEVKIKNDSIINYDILVQKGLIKDTGKLVKNILRGKRALIVTDDIVDKLYTNIVKESLEKEDIITSVCVLPNGEPNKNIESINNIFSALAKNELSRKDIIIALGGGVIGDMAGYAAAVWMRGIDFVQIPTTLLACVDSSVGGKTGINIKEGKNLVGAFHSPKLVIIDSNTLLSLPKREFNEGMAEVIKHAFLFDEALLELIEAHVHNNTNLDMDFVLKRNCELKAHIVEIDYKEQKERMFLNFGHTIGHSVENAAGYGVLLHGEAVAIGMIFAIEYGIRKGITKDKNILERAKNILSKFSLPISIPDNMNLKDSIKLDKKRSDDKINFVFLESIGKPCVEKVSVEDILK >gi|343385920|ref|AEM21410.1| hypothetical protein, 876838..877392 [Brachyspira intermedia PWS/A] MSDTASIDIKDNTYTNIDEYVMETLNAYRVHATNIIDISGNKYYISSVDILNTNDESFDEKKDKENYIYISIWKLNNNKANFVSGFYPYTISADWIGDIVSEVSNNMLEFVLDRYSKKYSCLNFYKFNIVKKNNTVNFYLTNFSERTFKINPNTGELSAPEYFFDHDNVMMNDIGKYYEYYNFN >gi|343385921|ref|AEM21411.1| flavodoxin, complement(877569..878000) [Brachyspira intermedia PWS/A] MNNKIAIIYWSGTGNTEIMAQNVQKGIENAGGEADIFPVSSFDTANINNYSKVALGCPAMGAEVLEESEFQPFYDSIRGSLSGKKVALFGSYDWGDGEWMRIWQDDVKDTGASLVKDGLITNLTPDDDAVDECKSLGEALLKA >gi|343385922|ref|AEM21412.1| hypothetical protein, complement(878029..878610) [Brachyspira intermedia PWS/A] MKEYSFDELIINHCAPALSGIKIANIFTYQYGSKKEVYKKAASYNKILNSRNINVSIIKDYDNKVIVYVYNKKRLEEYILNDDVFDFLELYGYEAKDVYKCIELLKYRMQNNKDFPHEIGIFLGYPLMDIYGFINNYGKNSLHTGYWKVYHNKNEAIKTFNRYNECRSFYINTFLNGKGILEIMDDYKMYIQN >gi|343385923|ref|AEM21413.1| Auxin Efflux Carrier, complement(878711..879640) [Brachyspira intermedia PWS/A] MYTIIELILPIFILIAFGKILKHTNIISNEGIKTIKNLAVNLFLPFTFFNILIHGTFNKDSIVLIVAGFIIIFSAYLLGFLFKPLFSDDIKKYVPYTNTCIESGMFALAILNMIIGKENLFQIIQMDMVNNIFVFTVVTTGLTLISGKKQSTKQVINSIIKSPIIISLILGIIGALFNLGEKIDNSNLSGTYNRIISFLTEPLSPMILLCIGAELEFEIDILKKAIKLFFIRFATMAVLISLILFVISKIITVNSIFVKSMIIYFLSPSPFILLMYTNDKKVNKFLSGFLSLQIIMSLIFCIIVSFIQF >gi|343385924|ref|AEM21414.1| heat shock protein Hsp90, 879880..881799 [Brachyspira intermedia PWS/A] MAEKQILNFEAETKQILNLMVHSIYTHKEIFLRELISNASDALDKARFESITNTDKYTDIDNLRIKIEVDEQNRTLTIKDNGIGMTREDVINNIGSIARSGTKAFLEKIQKDKEASKESGIDLIGQFGVGFYSAFMVADDIVIETKHVDSEKGVRWESNGDGSYSIEDIDKQDRGTTITLKLKGKDEKLEEDGFVDDDYCNRYTLESLIHKYSNYVHYPIVMDMPIPKKEENEVQQYEEKTINSMISIWQKSKSDVKPEEYNEFYKEHFHDYAEPFEVIHTKAEGTIEYTALLFIPSRAPFNFLHPDFERGLELYSRNVFIMSKCKDLLPEYLKFVRGLVDSPDFSLNISREILQHSTQLKRIASNVEKKILDALENILKNDRKRYEKFFKEFGESIKIGIYSDFSKKDKLANLLLFQSSNTADDEYTTLAEYKSRMKEGQEYIYYAAAKDKSAIEKLPHMEGMKDKGYEVLYFTDRVDEFMITMMKEFDGTKLHSILQADNNDSENKDENKESANKDILNAIKDVLGADRVAEVRETNRLKESVVCLSNKEDSISFNMAKVLAETGNNMFGMKPERVLEINTSHEVFKAMEKEYQANKVSETFKEYSELLYDEACILEGLPLEDPKLFASRMSKLMLK >gi|343385925|ref|AEM21415.1| hypothetical protein, complement(882042..882467) [Brachyspira intermedia PWS/A] MIKKTILLFFIAVITVYADDIYIAPNQLPNNILQFINAFFPNSSIMYAEIDRKKYEIALDNGVEMEFFRNGELKEIDGNYTALPSNILPQPVANTVSKTYPNTVITKIKKKWNLYEVKLNNMMELYIDASNGQLLGQKFDD >gi|343385926|ref|AEM21416.1| hypothetical protein, complement(882482..882895) [Brachyspira intermedia PWS/A] MNRVLTATLLFILICMALFSYDNLLPEKSVKFINDYFNYNNIINIVKTNEFYEVIFNDDIIIHFDLDGYWQEVSGNSSPIPINFIDKKVLNTVRKTNPNAAIINIKKRWNMYVISLDNYINIFIDFAGMLIGQKVPD >gi|343385927|ref|AEM21417.1| hypothetical protein, 883044..884480 [Brachyspira intermedia PWS/A] MIVDLKKYSLIDWQQIKTNIDSIKDMHLDIIIINEDGILSVIPYEKIEDVLFPLDGSEYIKKSSIYVDKSLISIIGKQVTIDLNKQHADIHDINIFYSLYKNCRFETDKDYYETHFNELISIRNIERIDYLKELFNKLRLFTTQNKVDLELAKLIGNILTDIGIIERLNLIYHLNYIKQNNISDLKNYQNVKKDDLLFADIIGTIVNLLEKEYSDISIFHSISSFTDDNVICHSNRVFVMMVEFLYYYNEEISRGVASKLRVDYKKKYYSYYNEIGKKYNILTKADRIEDISKVGFRKIEQNEIKYYARAAFWHDIALVDVLPNIPIVSNNEGDNHAVLGFNLLKYCMAQNEYTYATVGLHHEYYGNGYGIFTNMYNKQFANKTYNNIENILTYDSNDIENLTALSYFPAKALEIVDSYDSLYMNISKTGTGNIANEVISYMYENFLGYNIKIDPVIFYIFIKYLEKVRGAYIFDCPL >gi|343385928|ref|AEM21418.1| R polymerase sigma factor RpoD, 885007..885489 [Brachyspira intermedia PWS/A] MHIARLIKKSIQTSKTLTQKLGREPTIDEISKEMKIDRKTLSYIMIFTQDTASVDSFFRNSDNNDMTSIIEDKNFPSPHQKAFMDSLRDTLTEALKCLDEKERTVIISRYGLYGKEAKTLEDTGKELNITRERVRQIQIKAIKKLAGLNLSKELKSFLWD >gi|343385929|ref|AEM21419.1| hypothetical protein, 885596..886453 [Brachyspira intermedia PWS/A] MKAKLKPIIIIVILLVILVAGFFITKSILSSNNIPILDFGAANTNDMPEDTLTTDDIFGEDITPEEKDFLATNNTILTDNNTNTKSTNKDSSINLTDNGLYEAGNNLDIPDIKPPVSKPNNSSSAYTYNTDNTVLVTSSNTLRPNDNMMNTMSSTETNVRISSFIINYNDRFVATRTNPVLITLAVKSPAEGKYAKIRVYARRVDNNYNILSRDLVFYLPKIYVLDGQAQTQFYFAGRTSAGGKYLPKGRYLLYAEAEITDANGRSVGKTGRYPVPQWNYVVTLQ >gi|343385930|ref|AEM21420.1| acetyltransferase, complement(886520..886966) [Brachyspira intermedia PWS/A] MTIYETKNRDDELIDKLYIIWEKSVRATHLFLKEDDIINISKYVKKYLIEIKHLIIAEMENNIVGFMGIENKKLEMLFLDPEVIGNGIGRKLIQYAAYNYNIEEVSVNEQNTNAYNFYKHIGFEDYKRDEYDELGNNFPIIYMKLKNL >gi|343385931|ref|AEM21421.1| extracellular solute-binding protein, family 3, complement(887087..887794) [Brachyspira intermedia PWS/A] MIFVSCSNSSKTSDTENKKIYVGIDVDFPPFGYLDSDGKIGGFDYDIMSEVAKLSGLNVEFTHMQFNGLLPALQAKKLDAIIASMTVTEERKQFVNFSEPYYVSSQVMLVHKDDDSIKTFDDLVGKNIGVVIGTTGDTIMSEKEGVNNEKFDTGAAAVLALKEKKISAVVFDKEPCKSFAKYNDDIKLIESDAVEENYAIALRKEDTALLEKINAGLSQIMTNGTYEKLIEKNFQ >gi|343385932|ref|AEM21422.1| putative biotin-(acetyl-CoA carboxylase) ligase, 887984..888751 [Brachyspira intermedia PWS/A] MKVNIFTEKLNTKIYGQNTLLFESLESTNKKMIEDLNSGVKLEEGTVYIALVQTSGKGSYGNKWESNNNLGLWFSVLVYSPYKKEALSFLPGIALSKCLREKYNVDAHVKWPNDVLVGSKKISGTLIQVTPIEDINACVIGTGVNLYQSSEDFDLSIRNKATSLYIETGKKIELSDFYKDLIHYFEDVYTGSKELSEYFKEYSKMIGKTIKAIKDNAEIYADVKGITEEGYLKVEVNGKDEIWISRASLDIDTKY >gi|343385933|ref|AEM21423.1| hypothetical protein, 888776..889012 [Brachyspira intermedia PWS/A] MRKPIPYKKPVEKKHINKKSIVLLIVFELIIIVLSIVTTAIISLLFGINPYISAGISAAILIVFSVFVAREFLLSINK >gi|343385934|ref|AEM21424.1| binding-protein-dependent transport system, inner membrane component, complement(889262..890893) [Brachyspira intermedia PWS/A] MDFWTYVTIIITFVFALFLVYPLFSLFLSSFKDIKTDAWTLNNFIRFFTKKYYYSTLINSFVVTTSVTILAVLIGTPLAYCMKMYNLKGKRIIEILIIISMMSPAFIGAYSWILLLGRNGVITRFFSYIGINIPTIYGFDGILLVFSLKLYPFIFMYVYGALGKIDNIFLEASENLGASSFMRNMTVTIPLIKPTIVSAGLIVFMNALADFGTPMLIGEGYRTMPTMIYSEFISEVGSNANFSASMSVIMVIITTIMFISQKYIVNKRSYAMNAMNTIKSKDIKGIKSILIHSIIYILVLISILPQITVIYTSFLKTNRSVFTSQFSFESYETIFRSLASSIKNTYIYGIITIAIIIIVGMLTAYITIRRKNILTSIIDIVSMFPYIIPGSVLGITFLTAFNKPPIILTGSSIIIIISLVIRRLPYTLRSSSAILYQIDKNVDEASISLGASEIKTFFYITAKLMLSGVLSGAILSWITVINELSSSVILYTTKSRTMSVAIYQEVIRASYGTAAALSTILTLTTIISLIIFFKISNKKEITL >gi|343385935|ref|AEM21425.1| periplasmic-iron-binding protein BitB, complement(891001..892017) [Brachyspira intermedia PWS/A] MKNIIKLFLVSLLIVISILSCSSKKEEKVNSLVIYTPATRFFIDRLVEEFNKKNPDINVEIIIAGTAEIIKRIEAEKNDPLGDIFFAANENILKYNSELFQEYVTTNYDNIYEDYRSKEKYITGFMLSPSVLIINTNLIKDIKVEGYADLLNPALKGQIAFNDPTTSSSSFEQLVNMLYAMGNGNPENGWNYVEKLYANLDGKLLSSSSAVYKGVADNEYAVGLTFESAAANYIHTGSPIDVIYMKEGVLTKAHSMAIIKDAKNLENAKKFVDFVTSYDAQKIINDELFTRAIIKNLDGSQILMPLENINDIKEDEEMVDKNKEAWLEKFKNIVTAGI >gi|343385936|ref|AEM21426.1| periplasmic-iron-binding protein BitB, complement(892040..893068) [Brachyspira intermedia PWS/A] MKKIIISFLILSALLIFSCSKEENTNNKLVIYTPASRTLLDPLIEDFKQKNPDIDNIEIIMAGSGELIKRIEAEKDNTLCDVLMTVNVDFMKENTNLFTNYISTNEEYIHDDFKNIEGSITRFMLSPSVLIVNTNLIGNINIEGYTDLTNEQLKGKIAFNDASSSSSAFEHLVNMLYTMGEGNIENGWEYIEKLYSNLDNKILDSSSAVYKGVTDGEYSVGLTYENAAADYVSSGAPVQIVYMKEGVIMKANGACIVKNAKNIENAKKFIDYITSFEAQKKMNDELNARAIRKDLPKSNVLIDINEINTITDSNELEKISKESSNNKEIWLEKLKDIIISKQ >gi|343385937|ref|AEM21427.1| periplasmic-iron-binding protein BitB, complement(893082..894083) [Brachyspira intermedia PWS/A] MISIIIFSCNKNESESQNSSLVIYSPSSRDFIDPLIEDFKSKNPNINVEVIIAGTGELIKRIETEKNDPLCDVLMAANINLVKNNQDLFENYTTTNENEILDSYKNVEGTMTRFMISPSVLIVNTNLVGNINIEGYSDLTNEQLKGKIAFNDPSTSSSSFKHLVTILYTMGKDDINKGWEYIDKLCDNLDGKLLTGSSAVYKGVADNEYTVGLTFENAAANYAASGSPVKLVYMKEGVIMEPAGIYIIKNAKNMENAKKFLDYMTSFDTQKKMNDELNARAVRKDLGASPILVDIKNINAITSNEELEYIDNFVKENQETWLEKFKNIITDKL >gi|343385938|ref|AEM21428.1| hypothetical protein, 894318..895427 [Brachyspira intermedia PWS/A] MKSKIADKAYTLIKKKKYKKAKDFLLSNKSKILHDAEALAMFSFADIFLKDFYGAEELSRKALREDSFCFNAMLAKAYVSLHNGHRENALREYFRILDLEPENKIARDNIERIRFLTNNARGDEINPRAYLLGKKKLSMSRFIVLIPIAFILTFLSYITIDRVYPKIRYVLLDKEQKELREKLENVYLFEGLEDGKIPESAKSPTYSPREVAEMFDKAKNNMRSASVNEAVMIINGALKSDINEYLKERFRVLKEFVIAPDYNIFRESPNYLTVVENYDLYNGGYVKWKADVNTVSQTNIDGIPKKKARLLIYDTADKNIAGVADLIVNVTVTLEPKNYIEVYGKILGYDAKQKSIQLEGQIIKHLPKK >gi|343385939|ref|AEM21429.1| type III restriction-modification system: methylase, 898232..899479 [Brachyspira intermedia PWS/A] MEYIHNYLKKLFKKNNNYIGKDGDLLISKIAEDARLYNSELIKFLLNDKRCQYYFLEKIDDVTIFKSEDFRMCINDARFLGNSFTKYGNKIGLITDKSIVKIMNEDYVVLSYPYKDCTLDGGMTKTEAKRTNRKETMINNILFKDDIHKLKSPKAFKNFKKYSFENEKLKEETPEAIKGNENLIINGNNFAALCSLKAKFAGKIKLIYIDPPYNTGSDTFSYNDNFNHSAWLVFMKDRLQLARELLSDDGAIFVQCDDNEQAYLKVLMDEIFGRDNFISNFIRKTGQAARIDAKYIAKQHDYLLLYSKNIDYILINKEIADNMDSYIYEDEFVYTRGKYKLNKLDRGSIRYSDSLDYPIKAPDGTLIYAGGVKEYNGWCWRWSKDKLDWGIENNFIVFKKIIMEYGLFILNNINL >gi|343385940|ref|AEM21430.1| site-specific DNA-methyltransferase (adenine-specific), 899713..900060 [Brachyspira intermedia PWS/A] MNRRYIGVEQIQEHFDICVERLKKVIEGENSGISKNVNWQGGGEFITFDIASYNADWAKKIEKIKDDKELKEIFEDMKNKSLINHRLQIDYFENKSFEDDEEFLSLKLERKKKFY >gi|343385941|ref|AEM21431.1| DNA methylase N-4/N-6 domain protein, complement(900565..901539) [Brachyspira intermedia PWS/A] MNTKVKSVKNKTIDFDINTEEGKSYLNKCIIDNENIIEYKKENIINKTINGNTFDVLKKIEKNIADLMIVDPPYNISKNYHGFKFKDIDNLSYEKYTHLWVEDIIPILKENATIYVCCDWKSSLVIGNVLEKYFNIQNRITWQREKGRGAKNNWKNGMEDIWFATLSNKYTFNVDDVKIRRKVIAPYRIEGKPKDWTETEDGNFRDTCPSNFWDDISVPYWSMSENTAHPTQKPEKLIAKLILASSNADDFIFDPFLGSGTTSVVAKKLGRNYSGIEQHKTYCAWAEKRIENAESNKEIQGYTGNVFWERNTISIQKKIKNVNQ >gi|343385942|ref|AEM21432.1| bifunctional GMP synthase/glutamine amidotransferase protein, complement(901562..903106) [Brachyspira intermedia PWS/A] MQNNIDKVLILDFGSQFTQLITRRIRELNVYSEIHPFHVSIDFIKEFNPKAIILSGGPSSVYEEDAPKVDKELFNLGVPILGICYGMQIIVYSMGGKVESADKREYGKAEIEITNHESIFKSFGKSNIVWMSHGDSIKSIPEGFELIAKTPNTELAAIENKQKNIYAIQFHPEVVHTENGIKIIENFLFNICKCERNWNMGSFIEYEIKRIRETVGDKNVILGLSGGVDSSVAAVLIEKAIGKQLKCIFVNNGLLRKDEDKKVVEVFRDNFNIDLIYVDASKRFLDKLAGVTDPEQKRKIIGHEFVSVFNDEAKKIENVGFLAQGTLYPDVIESVSLRGSSAVIKSHHNVGGLPKDMKFELLEPFRELFKDEVREIGLELKLPEDIVYRQPFPGPGLAVRILGDITEERVKILQEADDIVVTEIKKAGLYRKLWQSFAILLPVKSVGVMGDGRTYEQVCAVRAVESVDAMTADWAKIDYNVLGIISNRIINEVKGINRVVYDISSKPPATIEWE >gi|343385943|ref|AEM21433.1| hypothetical protein, 903721..903948 [Brachyspira intermedia PWS/A] MTELREKTLNLIKELPEDKLLSVIDFINNDSNEKIINDKKQALENLKKYQGRLPENFDYKKELEEYRDEKNFNLY >gi|343385944|ref|AEM21434.1| integral membrane protein MviN, putative virulence factor, 904453..906066 [Brachyspira intermedia PWS/A] MSENKTVSKEKIAKSSLKMSLVTTVSRVFGLVRDQIQAALLGTTFIADAFAIGFILPNLLRRLFAEGNMVASFIPVFTELEKEKGIEESKKFFRAVFTLLGLILIVVVAIGIIISPLLVRILYKSAHNNIEALNLASDLSRIMFPYLLFISLAALMQGVLNIRGYYSISAASPILLNTVIISMALFFKFFLPNFFNNMAYVFAFAVLLGGFVQFAYQMPFVHKQGFSFKPYFHFKEPYVIKMIKLFAPGIFGASIYQINLLVSTAFAGAIGEGRVSAVTFATRIHEFVLGVFAVSVATVMLPTLSKLIADNKKDEAVENLGYSLRLVALVTIPATFGFVVLGREIVRMIFEYGAFSSKSTYLVSSALRYLSISLFFVASYRILVQSFYAMKDMKTPVYVAFFTFIINAVSNYLCVYIFKFDIIGISISSVVANIVSFCILYVLLIKRMAVKSIINKKIEVVKTLAASLFMAASVYGMKYYLLSSNADSRVFFILKVFIVILLGVVVYSIMNIILRNDDFVSFISMFKGRLSRKFLKK >gi|343385945|ref|AEM21435.1| methyl-accepting chemotaxis protein, 906146..909040 [Brachyspira intermedia PWS/A] MSLKNKVLLLVIIVVILALSPTIFINTRTNREALYNSAMNISQNYFYDVSSTFDNIFTSTTVGTVSLSDIATVSYDLYSTGSVTDVATNLRKIIYRFHKSQLGLHHVIANGIYFEPDIIDNNPYMRGLYSLYLYDVGNTGNMQPKIETVNDNYNQEEFYSLALPENWNREAKRPRTIYYSSPYLKNIDKPQKVISFSSPIYSSINDNLIGVSLSDVSLEIVHEMFTNIVKTGPFNTVIFDSRNRRIVYHDNANYILSDLKDIEWINNAIDNTTFYTNTRIRENYKVGDNTYTLFFKQFDNGFYNIFMYVPTSFFYNVLVTTNNTIFFILIVAIIVIIVVLNITIPISLKPLDKISQELESGVFDNNIFVNVSKIHSRDSLGDLSTWIRIFFDMVQHVFSSVSKTLKVSKEQSNALKVKMVDISEAAGSMTESVSLIIDNISSQQTEFKHVETSNLEIYKIIASSLAELISIDDMTNNLQSKIDDQSVSINQINSLTMTMQKDMQEVSLSVGKAKEESEHVVSLAEDSKEKIVKTENITKSLITSIRGITDFVNSTIDISQQTNMLAMNAAIEAAHAGEQGKGFAVVAEEIRKLATTTNLQSEKAWKILRDIEKEMNLIMSSMTERIVTTEDMLVKLQNFVNTMTKVKKVADEKYDSTKEISVSIESLYDAVKEIKEQYTNLHGRISIAKDDLVNLSDFSKKNDEAMKLVSQNSDDIVSKTQDMGNQIGNVFGLIKEIEQLSNVASDSVDMLEKEMSNYVIKDFEDVIKEKIKIINEGDRAYSRQAFVESIYRFVVATFGKDKFQTLLDQMPDECKNIFKDLKKTKFRKKYPLSTSCFIPMTSIMDEFYDGAREGIRQKARYDFKRFSFIKKVFIKLAKKNSLADVFVNFTKKMFKNIHVEVVKAEKRRIIYHLHYFPNYDSMIETYFDEMIKNIFRFKYPNGSKVKMTKSISKGYIYTEYIVTW >gi|343385946|ref|AEM21436.1| hypothetical protein, 909157..909540 [Brachyspira intermedia PWS/A] MNITDKYNLSMGSANLTKLENAKKQYGNAKFSIDTTPTENVNNAISKYNKEFEKKRLRQVSEDFEALMINQMLKEMRKTVDKSGLIDGGMAEQIFEDMLYDEYAKEFSKTKTFGLADIIYNQMEKYV >gi|343385947|ref|AEM21437.1| hypothetical protein, 909575..910018 [Brachyspira intermedia PWS/A] MTKFLKLILISFLVFFINYDSNKHFDKYYIPIDRLCMIRNVTGYPCPGCGMTRAHIEVLKLNFKKAFYYHPLFIFPSIIFFVVIFKKRFKIANYIYHNNYIIISMLLIFIIVYIIRFILLFPNEEPFTYNYDSEFYRAFKIIKNILK >gi|343385948|ref|AEM21438.1| TonB-dependent receptor, 910090..911475 [Brachyspira intermedia PWS/A] MLNEIGIKNMPAFLLILLYMFLSFPIYAEDNILSEDENAFDYEIIQEETNEIQASHKEKQFLFDKSIYIRKSQIKSSKSQNMAELIKEYCNIDIKNKTVYSQSTFILNGKVLNNDEKKIYLFLYNKDDIDSININYYASSGSIVYDILSKKYSKSEELLYTKLSRDIKLESDKTIKYVKTQTNESKSSGKMNLLEYNIKNQNNSSLNFNLDTSGEERGFSSKKSKTADFRSYVNGNVNFNVSPIKQISVTGRYFVNMQTDIALLNRGYTNNIKNQNLYQGGNIKLSLKPHDIVTLEALYFISSKKDLLTNNNQYLTTQGTKTSIIFNIPIKDISSTIRIKGNYSYLVGKNLYNVSVNNNDLPGLPRHQFNTSLEYIYSRNKDFESSILFNVQYIGDQYNNTTKSEVDKSYTTFDIISSFVFKKDISLKFGVKNVLDVKYETIKGYPISSREYFVNVSAKLR >gi|343385949|ref|AEM21439.1| DNA polymerase I, 911640..914285 [Brachyspira intermedia PWS/A] MRTYFSLINTYPAEYVAIALDSSRKTFRNEIYKEYKENRESMPDDLRSQIPILYNLIDALGISRIVLENYEADDIVGTIAEKNKKENIKTIIYSPDKDILQLVCDDVRVVASNKDNELMEYDAEAVKEKRGVYPNQIIDLLALMGDASDNIPGVKGVGEKTALKLLEEYKSLDGIYENIDSIKGKIQEKLLESKDMAYMSYKLATIERDIKDFNLDYNEIASSKINIDEVNKILDELELKQIRDKINSYIYGSSSNKKAEKVKISDEKTNSNETVKEESPILSAKDNKASYYLIENETELENLLKDINSKKLVCIDFETTGLDTFKDTIIGISFAIRSNEAFYLDLSGRTNIDKDKCMNLVFDTLSKEDIKVIGHNLKYEYKMMRAIGKSLGNMYFDTMVAAYLINPTRGRYNMDDLAMAYLSYNTIKYSDLTDNAKKTLLDAPLKDVVEYACEDADVTFRFYECFAPLLKTHNLEELFFNIEMPLVSVLADMEFDGVYISSERMKALSDEYTSLLEKTKEKIYKEAGEEFNLQSPKQLEYILFDKMGIPPTKKTKTGFSTDEEVLTELSQKYKIAEYMLTYRKYAKLKNTYLDVFPTLINEKTGRIHASFNQTVTATGRLSSSEPNLQNIPVRGEEGREIRNTFIPEKGNLLIAADYSQIELRLLAHFSNDPVLVEAFKNNDDIHRKTAMKIYSVSKEHVTASMRNIAKIINFSIIYGKTAFGLSKELGIKRKEAEDFIKGYFSTYSRVKPFCEEVVEEVRNKGYVRTMCGRIRDLSKTINSSNAMARNEAERMALNTLIQGSAADMIKVAMVAIHKEFKNHLKTAKIVMQVHDELVVEVSEKEADKAMTIMKEIMEHSVKTNVPITVDIHKGNSWGEVH >gi|343385950|ref|AEM21440.1| hypothetical protein, 914846..915385 [Brachyspira intermedia PWS/A] MRIIEIVDYDPNWKNLYREEESKIKNIINDILISIHHIGSTSIENLKAKPIIDILAVVDDINKVDSYNDDFANIGYKAMGENGIAKRRFFMKDYIDDNGTQKRFSHIHIFDINNKFDIERHLAFRDFLRANKNIAEEYVKIKLEALKNCNNDIELYCNYKDKFIKDIEKKALEFYRKNL >gi|343385951|ref|AEM21441.1| N-acetylmuramoyl-L-alanine amidase, complement(915493..916278) [Brachyspira intermedia PWS/A] MKEAFNPAVSKFSEKTISTIIIDPGHGGKDPGAVGVNKLFEKDIVLAFSLELKEELEDLLPNVKIVLTRTGDTYPTLEKRFEIANNAAKINTDKAKNALFVSVHANASFSPNARGFEAYFVSAQESSEYARAVSMFENEALVKFDNIDTSKYEKDSSQITHNYMLVEQYQKESKLLAESITEQVLKVSGVARRTKPVQNALFYVLKGAVMPSTLIELGFITNPTDAKFMNTKETRLKMVKATAEGIKKYIEIFEKTKGFTK >gi|343385952|ref|AEM21442.1| DNA topoisomerase I, complement(916386..918446) [Brachyspira intermedia PWS/A] MESPAKAKTINRYLGSDYLVMSSMGHLIDLPRSRLAIDVDHGFEPEYITIRGRAKILNDLKKEAKKAEEVLLAADDDREGESIAWHIGNKIRGVNSAVPIKRIVFHEITKDALKEAIDQPRDIDISKVNAQKARRVLDRLIGYNLSPLLWDKIKRGLSAGRVQNVALLIICNREDEIETFVPVEYWTFGVFLKHKNKEFLAELQKYKGEKPDLKTRQDVEDIMEHLKDKTYTVASIEVKDRLRNPTAPYTTSKLQQAASSALGYSASKTMQVAQSLYEGVDIAGEATGLITYMRTDSVRISPVAQEQAKEFIEKEYGSNYLPPEPPTYSVKKNAQDAHEAIRPTNVFLTPDSIKEYLKTDQYKLYKLIWERFVSSQMLPAKMKNTRAIIVAGDCEFSLSSSKIEFDGFMKVLTIDKEDKEKASKMPNLSKDDVCEFVENNPQQHFTTPPPRYTDASLVKILEESGIGRPSTYAPTIKTIISRHYVQRKGKQLVPTELGKLVNELISENFPELVNINFTADMESKLDKIEDDNIEWNNILKEFYPHFLDTLKTATENINNMKDFFNEETDFVCEKCGKKMIKRLGRYGYFIACSGFPECKNTKGISFGVCPKCGGDITLKRSKRGREFYGCSNYPKCDFVSWDKPLQEPCPKCGGLMVEKNIKNKGLFKVCIKEDCGYSEEIKEDEE >gi|343385953|ref|AEM21443.1| putative DNA protecting protein DprA, complement(918578..919849) [Brachyspira intermedia PWS/A] MSNNYDVKTYLIALNQIDKVGDKRISELINHYESVENIFDDKEENIKELLEKKFKSQIGNFDKNEILDKANTIVEKSNNYGIGILSLFDEDYPFNLKQIDNPPYILYYKGDLKKLRRNAIAIVGTREPTNESRKYSFELASKLSSLNISVVSGMAKGVDREAHLGAISSHINTVAVLGNGIDNVYPSENLQIYNKLSEKGLIVSEFEIGRKPDRMNFPRRNRIISGLSYAVVMVEAASKSGALITVDYALNQGRDVYIAPYDEKKSCYFGNHKLYKDGAKIAYNYIDILEDFDSIFSNDDDYVKMKLKYFEGGDIKSKAVKNDSIKTESNNSKERKEIKKETVKKEEKKKSKISKQNDESIISSLEENEALLYNIIKQNDKIHIDEVIEESKMKVNTVTSMLMQLEIKGIIKQLSGKYYTIEK >gi|343385954|ref|AEM21444.1| TPR domain-containing protein, complement(919846..920559) [Brachyspira intermedia PWS/A] MEVILKYFTLIICFLSIISCDKQVFFNRFNLNRAYNLYEKGKNADDDKALLEITSTYNDIINQKIYAQDRLASVYRTLGERSLVKEQYAYSAKYFTEALKILPNSPYLRYGLGISYANLAESADTYEKKSNFIQRAENNIRFAIDKDPNNANYYAALASLKGMHQDNYEEAFDNIKKAVEMNPNNADYLMLLARIQYSRGNYNEAVAAYRKILNLPVENNVKETVLKNIEQIIGQRN >gi|343385955|ref|AEM21445.1| UvrD/REP helicase, complement(920713..924102) [Brachyspira intermedia PWS/A] MVFNLNDKQKDIIKCFEDNGLCFVNASAGTGKTSTITEIYIKLLENREKVSNIVVITFTKAAANEMLFRIRSKVRNKIDSIKNTNDEKSLKEKKYWQNVYKDILTSAKISTINAFANSIAMENAMYLSIPPNMAILEDSIDIQETLKSEILNILRQSKHAEIIRSLYRISTEDSKNKFAQRILHFLLKIKPRLENINRFEERALEIIKIDDKEYNKLYNNIYNYSIELINDNLKSGKFITECKNRISLLLQKIDLIKNKEKIKKLKSEDYEYIRIALDNVSDAKLGNTKHDEFRAVLEDLKQCTKSMFHYVDILYNEKNYKAVIDFIKETYNHIEKIKSNIGIYSHEDMMYKAIEALENNNISKEIRDNISALILDEAQDTSILQFDFINLIVFGQREITSKSKTDKKLMIVGDRKQSIYRFRNADVNAFTNTQENFSDYVRYLKDNYRSNSMLIDFFNDLFKSTVFINDDINYKDEDDLDYNKKTDDKSVSLLILNNNIEDESIHLYADDKTELEAYAIAEYIKNNYSNDYKNTVILLPTFSRLDKYLKALSDYKIPYYIDGGNKFYSREEIVLIKTFLEYLILRDHAKLPEILRSELFDIDIGNLSDFLFSLYVRNLDIKDYFPKMIYDENKYKEIENIAKSKSYYNQLKTAKELLNSIESKIPMMNAAEIIETICIDTNFYNYLMTMNDAEISYANIEKLKKIANDFENQTGNNIYDFVLNLKNTNDNEAYSAIPKLSVESVKIMTIHKSKGLEFNNVFVAGIGGHIRPNLSDFDFIEDSSFIKLPVKNKHYTVDFSALNTDYNKKSEFSEKRRLLYVALTRASNNLILSGEHTKEETYRSYLDKYFHDETKKYKADIISEDTEGLIKIDDLENKFIDTYFYGLAIKREEEIDIKDAQSIKEKINSLSKEDKKENNNEYIKNINPSLNNKFNKNYVNISELLDRKISKLENDINNTDNEYNEDIEVISYKDIGIIIHKMLEYFNFDKYKKEKEKYLDKIKSYILKSNNHYNKEQLTEILNTAFKKLFENYHIQNILNGDEEIVSREHTYQHDNGKKLITGKIDIITKNKNDEYYIIDYKVAEESEYNINKYQDQLNIYKFMFEEVMKTNNADIDKNKIKTDIIFLK >gi|343385956|ref|AEM21446.1| predicted transmembrane protein of unknown function, 924225..925343 [Brachyspira intermedia PWS/A] MNKNNIGYIFFIAFIFLSIFIMYKLLRPFGMIIFFAVVFYVILNPLFIKAMGDSYKKTDKLSIIKKNTLALLFSLISLIIFLVPTSILAYTIIVQLIDISNIGIKYFMNLDVNEVMNNSNINNFLKSLPIDVSMESILKRIQDSSLSNLTFISSYLTQNVASLLKSTGGFVSSFIFMMFSLFFFFVDGEYLIGQVRTLVPIDAKYLDRLIKQVSEGIKGIVFGNLFTGMFQGLCAFIVYTIFGVSNSFTFAFLTIIASFMPIIGTTIIWIPLGILFLINGEIIKAIIFIVCSWFFITIPDNFVRPLLLGNRIELHPLFIFFAILGGVLFFGLSGIILGPLSFILFFEIMKIYNEERALESKKERMLKRRRLS >gi|343385957|ref|AEM21447.1| ADP-heptose:LPS heptosyltransferase II, 925373..926362 [Brachyspira intermedia PWS/A] MIKILIIGMNYIGDTIFITPLIRAIKKHYNDCIIDVVNGARGIDILQENPYINNIIVRDDKALEYIKNQNYDIGITATTAFYGASLLYKAKIPIRAGVNSECRGFLLNKKTSWKKHKRHIVDTILSILKPMNIETDGINTEIFLNEKENEFGINKMKDYKNALLVHGGATRISKRYGIDNFSKLIEMFYKEKQVPIILIGAKDDLVFSEEMKKRLGNIITDDFTNKLSIRELISVIKHSYALIGGDSAPLHIANACNIYSIGIFGDTLPLIYGARGDKAINIEARKKYCTALKSFHCEYMKRGCKTIDCLKKLEPEEILPSLLSVYKAI >gi|343385958|ref|AEM21448.1| chloramphenicol acetyltransferase, 927416..928066 [Brachyspira intermedia PWS/A] MFNKIDLNNYNRKEHYEMYMNNIPCTYSITVPLNITKFKKAVKDKNIKFYASVIYLISKVVNKYKEFKMVLNDNKELGYYDIINPSYTIFHNDTKTFSSIHTEYNEKFDLFYKNYISDMETYGENKTFLAKPCDIKNIFNISSLPLSTFTSFNLNLPNSFEYLAPIFTIGKYYTDDKNNIIMPLALQIHHSVCDGYHVGIFFEDLQHEFDEFDLLY >gi|343385959|ref|AEM21449.1| hypothetical protein, 928193..929434 [Brachyspira intermedia PWS/A] MKFTLNKLYLFIFLSLFFISCATTSKSTSSGGVYVGEDTGEIGIVNNWKNPDFKGGKTTKIIAEGYASADGRGEADAIERSIESAKRNAVEQAVGSIVNGSTLVENNRLISSKIYDNTTGYISAYKVMNISKSGSVWYSKIEATVGVDMLQDNLQAMGILMDRKNLPLIVVLVTDETGNLSESFNVELEKNMSEKGFKFVSPSSLENVMRKENITYEDTRGSRSSSSIKKIADATGAQIAIIGKADAAFFTTIQGTAMKSYRSDVAITAINISDYSTIARATHQAGGVGGSDKDAHSIALVKSADYVSDDFVNQIVNKWQSEVQNGTEYTIYVSGLDFNESIGFEEAMKKNIGGLKNIYNRGVSGESSRYVVTYVGSSRDLAVDINSKAKNMGYQIIINSFDDKTITLKASKR >gi|343385960|ref|AEM21450.1| hypothetical protein, 929445..929990 [Brachyspira intermedia PWS/A] MAMKEKLVVHTCCAVCMSYPRTILEDYDTVFYFYNPNIYPIEEYKRRRDEFINYTNTLGIKTYISEEDDDVAKWYNDIKGLENEPEKGARCSICFKHRMKKAFEYAESINAKYVATVMTVSPHKNSKVIEMIGKSLAENYEGIEYLHFDFKKKDGFKKTNIIANEAGLYRQNYCGCEFSIR >gi|343385961|ref|AEM21451.1| transcriptional regulator, XRE family, complement(929960..930361) [Brachyspira intermedia PWS/A] MMDTEVVLKNLGQNIRELRKNKKMTIDELAEKSSLSGKYLQGVEVGNRNISIKNLNKICKALETSPDILLNMKPYNLKTSEEKIFAISEKLKKFEENKLDFIGNMIDHLNNIIKNEEKTNNILNHLILNSHPQ >gi|343385962|ref|AEM21452.1| hypothetical protein, complement(930561..930764) [Brachyspira intermedia PWS/A] MEVYTMDLSAYSSYSTGMLKQDISLSMIRKTSDMQAQAVDKIMTSMQPQAVSAPMRPGVGERLSTYA >gi|343385963|ref|AEM21453.1| hypothetical protein, complement(931000..931146) [Brachyspira intermedia PWS/A] MTSAGLNVYNSSAYGSAQSADKVASMVTPQGSSAPINNNIGKTLDVYA >gi|343385964|ref|AEM21454.1| pyridine nucleotide-disulfide oxidoreductase, 931481..933169 [Brachyspira intermedia PWS/A] MKKILIVGGVAGGASAAARLRRLNEEDKIIMFEKGPHVSFSNCSLPYHVGGLIPNEETLLLMNPEKFLKQFNVDARVNSEVVAIDRKNKEVVVVSEGREYRESYDKLILSMGAKPIVPSIKGIEKVNVFTVRNVVDISKIHNFLNGKPNAKVSVIGGGFIGIEMAENLKKVGYDVTIIEALPQIMKPFDYDMVQILHREIMDNGVNLIVNDKVDSFDTNTVILASGKKIEADAVILAIGVAPETDIAVKAGIELGKTKAIKVDSTYRTNDKDIYAVGDAIEVYSPLFNDYYRLPLAGPAQKQARAVADHINGRTVDNRGFISSSVIKVFGYNGASTGLSEGFIKAMNLNIDYDTVEIIPFDGVSIMPNARLMHFKLIYEVPTGKILGAQAIGKGNVDKRIDVIATIIKFGGTIDDLKDLELCYAPSFGTAKDVVNFAGYVASNLRNGDYKQVHYSQVRELVEKDAYFLDVRMPEDFAVGHLEKAVNIPLGALRSRYNEIPKDRTVYITCKTGLTSYTACKILQNIGFNNVVNVSGGFIGLSQYEYFNDKSTGRKPILTGYFG >gi|343385965|ref|AEM21455.1| putative Rhodanese Homology Domain (RHOD) protein, 933344..933949 [Brachyspira intermedia PWS/A] MLIENDLKILSPSEADEIINNTDNIVILDVRTEMEHNYEGMIEDSISMDFLKPRVFKREISKLDKDAPYLLYCSIGKLSIKAAEYMKEEGFKNLYILEGGLKAWNKHFGDNNKVSKFDREEAVERRKRLIIRLNRIEGQIKGMKKMLAKGEYCGDILNQSLAVKAAMGSVNQEIMEVFLNTCMISPKEKEDFFRYMRKLIK >gi|343385966|ref|AEM21456.1| putative orotidine 5'-phosphate decarboxylase/orotate phosphoribosyltransferase, complement(934003..935358) [Brachyspira intermedia PWS/A] MTKLTENPKERLIIALDFNSMGEATKLIDELGDEAVFYKVGLELFLYTKGEIIEYLASKNKKVFLDLKFHDIPNTTAMASLFAAKQNVFMFNVHTSGGKKMMEKTVQEIKKLNKDNLIIGVTILTSLSENDVKNMFSSNLPLTDLAVNWAKLGKESGLDGVVCSPKEAAVIKRECGENFRTICPGVRPKWAGTDDQERVMTPKEAIENGCDYLVVGRPITRNEDRVKACKMIVEEISEGMENNKKAKSKLIAGALLETKAVKLNVKEPFTFVSGIKSPIYCDNRYVIGFPEARKVIVDAFVSILRDKDFDVIAGTATAGIPWASFIAYELNKPLCYIRAEKKEHGRGKQIEGAECNGKKLILIEDLISTGGSSIKAFEAAKAEGAIGLEIISIFTYEFEKAYKNFEEAGIKFSSLSNFSSLMEIAKDEKYITEEELSKALEWNKNPDAWGK >gi|343385967|ref|AEM21457.1| dihydroorotate dehydrogenase (DHOD) class 1B FMN-binding domain protein, complement(935427..936350) [Brachyspira intermedia PWS/A] MDKFMSRLNINFLGKELKNNVITSSGCFGFGEEYSNYFDVNELGAVNLKGITLNKKDGNKGTRIAETPSGMINCIGLENPGIEYFKDNIIKNIKYSTPIILNINGATIDEYVKVAEIANEIERVDFIELNISCPNVKNGGMAFGASCESAESTTKAVKKVLSKKHLIVKLSPNVTDIASIAKAVENAGADSVSLVNTFLSMKIDTKTRKPLLGNVFGGLSGACIRPIAVRMVYQVYKAVKVPIVGMGGITNYNDALEFILAGASLVSIGAGIFSNPVLPIEVINGIDNYLKENKINNIKDIIGAAHL >gi|343385968|ref|AEM21458.1| dihydroorotate dehydrogenase electron transfer subunit, complement(936363..937130) [Brachyspira intermedia PWS/A] MFLEDGIIINNIQISNDKYLLRIKSKESYKHSKAGQFFMLKSNTFLRRPISLHYIDNDILEFYYQVKGEGTKYLSKLKENDNISIQGPLGNGFDTNINNKKILIVAGGMGIAPIKLLIEKLNNSNNSITLIMGGADSSAIKIMDRFNTNNIDLHITTDDGSVGDKCNTVDKTKELLKEKTFDIIYTCGPTVMMKALIKVAKENNILCYASLEERMACGVNACLGCNIEIKDEKSGYTLKKVCHDGPVFNAELLNF >gi|343385969|ref|AEM21459.1| SCP-like extracellular, 937388..937864 [Brachyspira intermedia PWS/A] MKNYILIFLLLVIISCNNNATNPSNNISISTDAKEVFNLVNQERLKAGLTEYKLDAKLCEAANQRAKEIVEKYDHIRPDGREWDTVLDEYGFNSGAYIRGENIVAMRESASSAMNAWMNSQGHKDNILADYYTTIGVGVYEYNGSKYWVQIFLSDSFI >gi|343385970|ref|AEM21460.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein, complement(938370..939185) [Brachyspira intermedia PWS/A] MKRRIIKIDEDKCTGCGICIPDCPEGALQVIDGKARLISDLFCDGLGACIKACPENAMEIEEREAEEYNESKVMENIVKGGINVIKAHLEHLRDHGEDKLFNEAVKYLKDHNMEVPNMEENKHCGCPGSMQKDMRNQLRGENNNNNVQMTSELRNWPIQLKLMNPNANYLDNADLLIAADCVPFSYPNFHSRFLKNKTLLMFCPKLDTDIDSYIEKLVNIFTNKNIKSISIVRMEVPCCGGVEMIVQKALEIAKKNIIIKEYIISIDGNII >gi|343385971|ref|AEM21461.1| putative membrane protein containing von Willebrand factor (vWA) type A domain, 939423..940466 [Brachyspira intermedia PWS/A] MFFGDFKFIVLYVFIPVLIILFIMSRRKVHKVLSIFTKNLNFQNDKNYKRISNLRIFSIIFMILAAACLIFALMQPKWGIIEQKIKTDNYMVTIALDLSRSMDADDVWPSRLERAKLEIEKFVKKTDNLSVALVGFAGTSFIASPFTQDMETFTYILDNLTTKSVTLQGTRIADALVTAKNTFNVDAVSKKSIILITDGEDHGGYFDDILKQLNEMNISVYTVGVGTEVGASISTDLGVREKSVISKRDDGTLKLIADSTHGKSYIAENVSLESIFDDMKQSMDSVSAVRNNRSYKERFQIFLAISAGLIFLASIFNILTQIKVRETIKEKIIKEKIMNRKSEVRNY >gi|343385972|ref|AEM21462.1| putative aerotolerance-related exported protein BatC containing TPR domain, 940475..941392 [Brachyspira intermedia PWS/A] MKMKKISLLIIIFLFSFITNIYAFSFNEFTAKLDVDRANRLMKKGDYDGAVTLYEKALSKVPNSPEIFYNMGTTMSSIGDMNSALQLFDMAKKSFTDNTSKEMKSSVHYNAGLTRIEMKDYQGAINELVESLVNTPDDSNSKMALEYAQKKLEEQKQNNNAGPSMQQNQDQNQQGQSDNNNSGSGNNDQNNQDNQNNDNQDNQNNQNDQNQDNQNNQNNQNDQNNNNQDNQNNDGNNDGNNDNQNNNGGDNNQDNQNNNGGNNNQNDNQDSKSDIDRLLESLRQYRKDKDNGDQYYGGGRIDKDW >gi|343385973|ref|AEM21463.1| hypothetical protein, 941418..943079 [Brachyspira intermedia PWS/A] MFFIACSSLFSQTSINAKISDTKVGVGEVFTVSVTIDNSSGRVLIDDIPGLTLRGTSQSINMMYSSGTFKSIKTYNFTYVANSEGKYKFDHITVKVNNRTYISNPVEIEVVSAPTRNDDSYTPSGNRFNDFMNYADDIYVDNSINKKEVYMYEPIYITQKAYTHIPVTVLGFSKIPDRTDFISYSDSSKYNTFTEIIDGKRVNSIPLKREVLYPVKTGTKNILTTPFVFEKDGMFYDRVQYGEETFSIKVLPLPDRKGFENFSGAVGNFIFTTKVNKTNVAVGEELLITMEVAGEGNTSIITMPNINDNITNYFSVYQPKIYETNWFDDNKMLGRKVKEYILVAKNEGASSIDSIDFCYFSPNDKAYTNIHSNPISLTISGNKINNNSFINNDGEEINTISIRNTNLREDKNFKVLSINIIYIYILILIIASLIIYNAKRFSNIKFSFAKKNNKDNSIDDILNYYNSNNRKEYCKSVENLLLTAIKNKFNIQDDNVLYDKLKDYIDYEKANEIKNIIDKCNFELYSGKSSANEDYHTKSIELVKYIKELKIKK >gi|343385974|ref|AEM21464.1| aerotolerance-related exported protein BatE containing TPR domain, 943106..943777 [Brachyspira intermedia PWS/A] MKKLIIVLLLFQSYYLCSAADLDKLNNLFESANKLYNDGKYLEANYLYKDIAASNFVSKDLYYNLASSYAAIGSNGYAVLYYEKALNISPFDKETKVMINSLTGNNDYDSQLIIIMYGFLMLFLVFFTLMIMMFIKSKKINKFLLMLSIVLLIPTAILNNNINSDYVITIDNANLYSGSSTKSSIVSQISEGEKLKVLEEYTNWYYVKGNFKGWISKSSAEKI >gi|343385975|ref|AEM21465.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase, 944213..945271 [Brachyspira intermedia PWS/A] MQKIAVGMSAGVDSTTTAKLLKEQGNDVFGVTMLLWNGDERAPLSGSCYSPYQKNIVGECEKYAKAIGIDYYAFDVSEMFKKKVIDYVTESYKKGFTPNPCIMCNSQIKFMALFEAIEKQGLEFDKFATGHYAGVKYDEKTKRYLLLRGKNLIKDQSYFLYRLTQDQLSKIMFPMHENTKEDTRNIAREYNLDVAEKSESQDFFAGEYHRLFDEDKEGNIINIDTNEILGHHKGIWHYTVGQRKGLGIAYKDPLFIVSLDSETNTVYVGNKNHTFVNEVKIYDVNWIAEPMQKEFEALVKTRSAHKGTMATVIPIDENTINIKFHEPTGIIAKGQSCVCYDNDITLCGGIVY >gi|343385976|ref|AEM21466.1| thiol-disulfide interchange protein DsbD-like protein, 945358..946170 [Brachyspira intermedia PWS/A] MNKLYIIIFSFVLLVSCSNAGKINWENDFDVSVEKSKSENKIIMMDIYTDWCGACKEMDKTTFKNKSVIDSSTNFIALKFNPEKMPNGEDILKKYNILGFPTMLFINSDGFILKRIVGYIESDELINEMNGMNKRNDKVKDIFKDDNISLDKLDIYLESGYDNEALDMYNKLAKENKIPEDKMPRYMSSIALLLLDNNKQEEGMKYFDEIISKYSNYNEVYIAHYYKALDMIVNNAQTNEGIKYIENLTNQVPDGIKNEYLDFIDYFSSN >gi|343385977|ref|AEM21467.1| thiol-disulfide interchange protein DsbD-like protein, 946229..947056 [Brachyspira intermedia PWS/A] MNKNILMVLVIIFASIISCNNASAEIKWEKDLATAKKKAKEKNVPIMIDVYTDWCTWCKELDKNTYSHKDVIDVAKKMVSIKLNPETSEEGAEIAQRYGVQGFPTILFISADGFILENVGGYVEGEKFVPYMKNAIEKLDKVNSVLANKEPTLEKLDLYLESGNEVESQKIYDALIQKKAISKEKMPKYLLGFGLIKAQKRDYDNANKYFDDIIKNYPNSEEVYIAHYYKAVMMALAGEKDEPKKYLEKLLDDPKVPENMKVQYENLLSYINENN >gi|343385978|ref|AEM21468.1| putative glycosyl transferase family 2 protein, 947161..948174 [Brachyspira intermedia PWS/A] MDIENMISIIIPVYNVSKYLRACLDSVINQTYKDLEIICINDGSTDDSLDILREYANKDNRIVIIDKKNAGVSAARNDGIDKAKGEYLFCIDSDDYIDNNFIEVFYNNAKKNNSDLVVLSSFWKLDKRVNKDYHSALPTCSMFIKNSILDNYKYLRYPLNVQPGEDGIFSHELLMYTNNVSFEYSVNYHYVKRPGQDSQRAVKEPKILLEAIPKWFELLDDFYTKYNFWDRKSLSFAKYIEGEAFLAFRTKNFIPDDERKIFDIIKNTLNKVLKNIDKEDYNKYFSKEFIIFIESNTIKEYYSKIKYKYNYIRFTLFGKDVSIRYRENRYKYYKNDK >gi|343385979|ref|AEM21469.1| hypothetical protein, 948813..949943 [Brachyspira intermedia PWS/A] MSKVAVIKCENYDLEEVKSAIEKAIDLIGGIDLFVKENDKVLLKPNFLAAETAERSVTTHPVVFEAVVSILQEKTENISYGDSPGIGKGSSVALKSGIDEIANKLNVKYADFEEPVGVTYEDGVQEKSFTIAKPIQEADVIISLPKLKSHALTTMTGAVKNQFGCIPGFRKAEYHLKLPDFEDFSTMLLDLNKLVSPKLYIMDGILAMEGNGPRNGNPRKVNALIVSNDAVALDYVASKIISFDYNSIPTLKMGFKHGFSNKEEIEVVGDGIESVKVTDFKKPHKGIGIGRSLMKLSKFPLIKRLFATIIPKPVIEKNKCVKCGVCVKVCPVTPLALNFDKKGKDYPPEYYYKNCISCYCCQELCPHKAIVLKRKF >gi|343385980|ref|AEM21470.1| putative 5'-nucleotidase/2',3'-cyclic phosphodiesterase-like esterase, complement(950033..951445) [Brachyspira intermedia PWS/A] MNDTHGKDEEENGMYGAARRAAYIKQVKATNNNVLVIHAGDTITGSIYSTVFKGQDEVKIMNKLGVGAATVGNHFVDYGLDNFNQIIKNRKFPTLSVNIKNKSDNSYYAEPYMVTNINGIKIAVIGVTIKNSGYNPQYIQNLVFEDEIESLKKFMTEIPLNTTNDVTILLSHAGYNVDIEIANTMPNTFDVIIGGHTHTVLQNADIVNGTPIVQAGCYGQYLGNINLNANNGNVSGFNYKLVAMDSSIEQDADMLALVNEMKAQVEQESNVRIGTLSEDLNYNVIEIRSKSTPLGNFVCDLIYDSNQEGDKADIVFINGGGIRAGFTKGDITLANTMTVSPYDNEVILVTLTGKDILDLLRVACKKSTIIPENSGGSFLQMSKGMEVKYNNIGDLISAKLNGIAINESQSYRVALSSFIYSSSDYVNITQKGKNINMTGKDCRDDMISKIKALDNIPSSYIDKTVRIDVQ >gi|343385981|ref|AEM21471.1| hydroxydechloroatrazine ethylaminohydrolase, complement(951715..953085) [Brachyspira intermedia PWS/A] MSSIFIKNASSIVTCDNNDTVHSSSNLFIENGVITYIGKETKEEKNADKVIDAEGCFVYPGLINTHHHLFQIFTRNLPQVQNMELFEWLTNLYEIWKNLNNDVVYYSSMTAMGELLKTGCTTCFDHHYLFPNNNAEGILDSQFAAAKDLGIRMYASRGSMDLSKKDGGLPPDSVVQSIDDILKDCQRVVEKYHDSSKYSMNMVALAPCAPFNVTGELLKQSAVLARDLKVRLHTHLCETKDEEVFVREKFNMRPLEYMESLGWVGEDVWYAHGIHFNEKELKYLADTKTGVAHCPISNMKLSSGVCRIPEMLELGVPVGLAVDGSASNDGSSLLEEMRVCYLLHRLNSSDKAPSAYNILKIATNGGAKVLGRDDIGSLEIGKAGDLFMIDMRKLEMVGANFDPKSLFGTIGWKNTVDYTVVNGKVVVEKGKIITIDEEKIYKLADDTENKYLSKVK >gi|343385982|ref|AEM21472.1| hypothetical protein, complement(953251..954525) [Brachyspira intermedia PWS/A] MEENNIQNNITNEKTNVINDINNKIGKILENNLISNLIIIAIGFIASLAMTIYFYLKIVNIAKLIDGIYSTSNSNIFSIDIFYFYIFYFLCFSLIFYINKNFNLKNILITFLSVIFILIVDLSTSFFIRSVAIDNNDFFLQISIIKYIFSVIIFFIIIALSYNGFQVLNSKTISEFFTFSADISIFAGLIAGIVSTVFGIFAAIVIFLIKDIISSLDEKIIFKLILLSISFLSSIFPFLVYTVYRKMKTNISIYLSRILMPFSLLFIFILLILLLMPDISPYDNRVSFILYNIMLAIIVLNMFFIRIDYKSSIFTKALYIVLPIIAIIFDILVLTSSLYRLIEYGISPNKITLIGTNLIMLGNLIFITFFNIKSILIIFKKSDNIPNIKEITIGDTKSVFYIYIYGIWAFIACFIIPVLFSFFQ >gi|343385983|ref|AEM21473.1| hypothetical protein, complement(954620..955387) [Brachyspira intermedia PWS/A] MNENIKFITDFLKCDYEILEGGLEDDTKIMECYKEHLEKGKKEGYTPLIIIPTDILTEAIEMFLEDNDAEIEDSKKLINEYIEKSKEVDYKDYLHQNIEDIYDDKEYIEEIKKSFNAPIVEGFEVIDSFASYYDYTLDNPVTVDLILAKIPTVNPYELACYIPMGGFNDCPNPETQAAIFKYWYEKYNAYPAVVGYDTWELWVEKQPQTEEEARELAIEHYYFCFDRVDQSGEDYDHGKLAGTLLKSDVWYFWWD >gi|343385984|ref|AEM21474.1| hypothetical protein, complement(955423..956865) [Brachyspira intermedia PWS/A] MNKKLLSVIMLISAVLLSSCKAADSINEYRKLKDIETTEDYGPLGDFLKTLPKTEEENAQSPYNELTTFITGRNQILSSSYKEGFETLARFLFTYPSSYYESEASYLLGQALIYMVENDPAYIEEFYTQLLSEGIVEGEENNDDAVTNLQASLKNIYSQMGIIVKDGKYSFNGYVFDRILQDEESAFPLKDFAYYFSIRHRFSNIQNENDKAKFITNITYLRRFSDRYRTSVLQDSILHNQSYFPNNLPFTLTAAENKNYKDTMETVQKRIDAISAAFEEEYYVIGNGIIIRDRIPAITPGTEKQLYTLYNYDFVTVLNKTNVYNPKERAREDWALVKYDTYYGPIVGWSYLRYMTNNIQNMEDVFENYKAAMNSYKNYDYLKSSDFFSYILNDPQTNYFTDKSVYFLWKVNNKIGELVSSKNNPYYKYVLDYPKYFYYNTNNNVLQSSTLLYNYLVKILPTNPYRFVISGDSEAEYSVD >gi|343385985|ref|AEM21475.1| Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria), complement(956890..958638) [Brachyspira intermedia PWS/A] MPDKRTILNGNGVGDDVAIGNSFFYTPSLSTPIYKIEESDIEEEYRRFDEAVKKSINEIELLQNHVDNNIKNILHTHILMLQDRVITKQVKEEVKEKLFNIEHIYDTIISGYLDKLSSINNKMLSERSGDIIDIKSRLIRNLIQPDSGDYSQVPKDSIVIAKTLTPSDVLKFNNIGVSGFIVESGGYTSHAAILAKSFGITTIFNIADISSKIKNGRKIIIDCKSNIVIMNPSKRDVENYTALSENIKKLKEKSILDAKEAASTKDGIEIKVHANIDIPEETESLLKFGIDSIGLYRTEFLYIFSDDGIATELPSEEIQFQVYKKIASKIKGRVIIRTLDIGGDKISPALGLDFKEDNPFLGWRAIRFCLSNRELFKDQIKALLRASHYGNIEIMIPMISTLEEFIETKNFIEYVKDELRHENKDFNDSMKIGALIETPSAAAIIDLIVKEADFLSIGSNDLVQYMMACDRTNEKLMYLYNPIDISVLRTLKRVIKIANENNKPVTLCGEMAGVPEYTPVLLGLGIRELSMSVTSVAKVKNIIRNISIEECEELVNNMLDKCDNNFSRSILRTFLRKTYKIN >gi|343385986|ref|AEM21476.1| 5'-methylthioadenosine, complement(959079..959795) [Brachyspira intermedia PWS/A] MSDIKRIAIIGAMDSEITNFKGMIENIEEIEIANITYYKGILCGKNVVLLKSGIGKVNAAIATTIAIERFNVEKIIFTGVAGSGNPDYDISDIVISKDLIEHDFDTSDLDGDELTVLVKGYDKNYYPADASLIQLAKESAQKVIKENKIYIDTIATGDQFVGNNEKVKQIHNKFKAGAIEMEGAAVAHAALMYKVPFVVIRSLSDKADSDAVVDFPKFVVKSAQNSMKIVVEMLENMK >gi|343385987|ref|AEM21477.1| aldo/keto reductase, complement(959898..960719) [Brachyspira intermedia PWS/A] MINVKFNNGIEMPILGLGLYKITDKKEVENAVKWAIEAGYRKFDTAQFYDNEKELGEAIRKTGIKREELFITTKIWNTKQGYNSTRKSFEESLEKLNMDYVDLVLIHWPGQKKERYLDTYRALENICQSKKAKSIGLSNFEINHLKDIFAHCNIAPVINQIERHPNLQRNELIEFCKNHNIIAEAWSPLARGKLFNDKTIIDIANKYNKTPSQIILRWNIENNISVIPKSVNKERIEENINVFDFKLDKNDIEKINSLENGFRVGPDPLTFDF >gi|343385988|ref|AEM21478.1| flagellar protein FliS, 960947..961336 [Brachyspira intermedia PWS/A] MLYDGAIKFLETACAAMDKKHGTEEAHNNILKAQEIIYELLSSLNYEAGDIAHRLASIYTYMNQKLTEGNISKTKPPLLEVIRYLKELKTAWEGVEEQMSKANSESKASSNSNKDNSSSNSDTKLNITG >gi|343385989|ref|AEM21479.1| AMP-activated protein kinase (AMPK) beta subunit glycogen binding domain (GBD), 961344..962093 [Brachyspira intermedia PWS/A] MKKIYKSTILFIIFSIVLLSCGEKDTETIEQYEARMNRLEILKYYNIQDVMAPRIVNDGVLFTFAENYDSVEVSGDFNNWEDSIPLIKSSYGVYYYLWQHPLKAGKYTYRYRVNGVWINDPVNANIEYDNNNQVVSYFVLTNDIGFYEKNPIYNSDGTVTFFYSNDTAKEVMFTSDKLGFDSLRYPMTYSNNLWVITLRAEAGNYYYNFVVDRIWEVDPLNMNVYKGSDGRLHSYTLINYNQTNKRMVY >gi|343385990|ref|AEM21480.1| hypothetical protein, complement(962173..962880) [Brachyspira intermedia PWS/A] MIKKISVIFLIIFSIALTQENTNDTNLNNTNNAAAVTEENTNNAPETNFFNAPIDNTNNANEPAILQDIRNIQDRAEVSNGWMFIRAIIGFIVTLVGIYLVFIYLKNKSKKVSGSSDIIKVLATTPVATNRYISIIEIVEDMYLVSISDHNINLLSKIEDKETKDQIKMMYINSKNNTVDDSFKNIFNQTLSVFKQPKMKEKDPLQTTSEIRERLHDLNAENPTINNNDDDNQNK >gi|343385991|ref|AEM21481.1| putative N-acetylglucosamine-6-phosphate deacetylase, complement(963183..965147) [Brachyspira intermedia PWS/A] MRIIITNESVYEWAAYYTVKCILDYADQDKPFVLSFPLRYVNKSYYQKLLSFYNDNIVSFKNIHIVSSGEYIDSNISQKYLEDNFLKFIDIPKENVHLFDSNVANRKEEAKRMANLIKELGNITLLIDNLAEDGSFLLNTPSSSLEGSVRDKKISEIIRSYESKKFNMPIEMFPREGFTLGFEEAFNAKYVLVMASGYDVSDALAHCVEGAISQFYPTSVLQEHKKLIIVADEESSSDLKVKTYKYAKSLESKSLHPKELIKGLYKSYYALTNIKIFDGEKFIDGHCIVIENNVIKSVEKEIDVDAVITRIDLGGKIVAPGYIDLQVNGIGGYDINADPSIETLKNMNEVCQRYGCTSYLPTVITNGDDYMLKIIDLFNSIEDLSVIGVLGIHFEGPYISHEKRGIHNDKFIREPNMEMIDKINASKCVMVTVAPEMVDGEVIEEFAMGGKVVSVGHTNGTYAEIKEKIPYGITFATHLFNAMRPWGSREPGAVGAVLETKDMYAGLICDGVHCDFASVELAYKLKTGHICIVTDAIAPAAAPEIKEYIWAGKKIHRDGNRLIDDNGTLGGSSITMSQSVRNVVNEVGATVEEALKMASLYPAQVMGIDDKYGRIKEGYIADLVVLDEKLVVKGVVFKGNYKEYDYDHEWVTHA >gi|343385992|ref|AEM21482.1| putative glucosamine-6-phosphate isomerase, complement(965161..965781) [Brachyspira intermedia PWS/A] MENVKNYKINFKNIFIFQQSEYIGLAPTDKNSKAYFLQENLLSKIDIPKENVFLFDGSGDESQMDKQLEIINKIGRFDVIWYSLTADSTSAGNERMSSLSSLFRIKTLSEHSVNEIKNKFEDESKVPTTVFSMGMGFIDMVDTVLLTSSGIDNSCSLRDCLEQGISNSSPLSKLQKHSDVTVIADYESSLRLSSQTVFMKIEKNIK >gi|343385993|ref|AEM21483.1| hypothetical protein, complement(965961..968717) [Brachyspira intermedia PWS/A] MKKLIRIILALLIIPILSCSQKKVVDREIEAVYDKKDNSYTITYPEYNKQYPKFINLKYGKSVKINEGISLTYNIDSDNIPIQLNIEVEENDITKKLSIENPLVNRNINLTLYATNFTPPLEKDKLDKLSVSIETVGNVDTKDKVKIAINQYDDKRKTRENIALILPESGHIAKSNPPFVMINKRTTLTRISISKELSFTTRYEYTLRNNSFFSITNTLENGKWYIAFDENGDTNLRKIYHFFIDDSSTKIIPITNKTFNIPRPFVFIDKQTFEVLYNLLYRATRLQPSVLLRNINAFKSYTSANMGKWSVNNIAYSFTDDTNKLYFENLPSHTMVMSLKAAFEPNNNLLKYEIKQMIRDIVNLDETKIENYNVIDAVNILANSLLMPFDLMYDEFSPEEIVLMKQEFIKYGETLYNYIVENPSEYRNKNTIKYVTTLGLIAINMLNENVNQDQIRNWHYFSMNYINSMVFSMFESDGSFKSSISEAFDTIMPILTYALSLKNVGIFDAFTLESFRNIGKYLSIVGYPSGYTLPIGYTGIYNRSKLRFDTGARNAVMELLSKMYANPLYKNYAVFAQSESADIRYLPYVLMWNNYYLKDNVNSTVDFQFETLLLKKIQTAIYNENIKALNAPYLAVYAKGRNADESFGLNHNDRMSFVYYNYGDSIIDELGYNFDSNNYTIFKDADFHNGISIDTDKIEENMGSYSYIENITNYYKMFYAHAKANQRYTYPVNLKNYDRRFYYLKPNILIIKENIEALPDITREYHVYGYKYKWNVNSKLPITFDNESNKFIIDGAYSYTYIQILSSNELEYNVIQTNIGQNKLYTAQVSTRENVKKFEPWIIVSTMPKNNVPIGMRRNILNPNINIGNFTSTNLNFTAGNKQYYINIEDYINTSDNTNKINNILYTENRESVIISSD >gi|343385994|ref|AEM21484.1| hypothetical protein, complement(968737..970317) [Brachyspira intermedia PWS/A] MAVKKTDTKKRLLKNFRHQKTASKTAEEKTTGRISYKELSEELRLKLQKSDEKIAELNKKYKKVVDIQKKKIEDKYKKIIEDLESKKSIPARTQSSNAEINKLQKRLEKLEKTNQKLEEEKRKIELKNEELKQKAREALKSKSEMSSKSAKTDREALKEIKALKEQLLESEQEKKELRAKLKEAVADLKNAKKNTNKLSKEDKEQYKENLRILKQIEKESKALDKKRELLKKEEEKLKEIRGDIKSSAKDIASTMRKSYIAADDEDDNDGNLLSNMDAKTEEGITKLATLLCAAMDDYREQKEKEREEAEKEAESVSVLSEGEERLNKASEELETLVENRLEDSESTKDENLSKRPFTIIDKIENSRVEINEGYTPPAGGQAIVASPDSTQQIGQAPQQGQQPNITVKVEAPKESAKLAKPESQLRPASETPTMRMKLLDDIDDYEKKLVITYGFDNMPENTYYSKYKRILRNAARISLFGNLQEGLEMFKLIRDQNIPDEYKQMIDKNIQDITYYLRGLHRVRME >gi|343385995|ref|AEM21485.1| putative preprotein translocase subunit SecG, 970591..970890 [Brachyspira intermedia PWS/A] MIIIIQGGKAEGLFSSAQANVLGSQRGNALSKATTFLSTIFIVGALLISVAISTQKTAFENVTNTPANTTTTQQQPSAPLTAPTNADTTMENTNTVSNQ >gi|343385996|ref|AEM21486.1| hypothetical protein, complement(971435..971986) [Brachyspira intermedia PWS/A] MPREVYDPKEKELEFYGKRDIKPPAPKREVSIFARRWFMFLYGTFLTLAVVGMLLYKKGFFNNIPLFEALKPKTDVIVKINKAQSIDDVIITTIELENSNYTNSESVEILRTSFSLYKYRKLIFSGDRSFNNIRFPVGQRIGFELNFDKNYWKEANKLEIILRFDNNLVKTNSINTKKIKIKY >gi|343385997|ref|AEM21487.1| putative carbohydrate kinase, YjeF related protein, complement(971989..973530) [Brachyspira intermedia PWS/A] MKVVTTEDLINIDKKTIEKIPSILLMEHVASEIFYLLVKRHRKLLYTKTVYIFSSVGGNGGDGLAIARYLIKNGYDVKIYITGNLDRVNKDTYSNFNILKSMNIDINYLGSEEDAVSAAENIERKSIVLDSLFGTGGNRPLEGIQKTLIDCLNNLDVLRIAIDIPSGLASKINDYDNVHTCFKAHETYTICFAKDIFFLYRTREYIGKLFIIKSIFPNEILDSWGYKAKLIDYNEKIHINRNSLYSKREQGMLAIVAGSDNYIGAAVLAANAAYRLGVGYIRLYVPKGIVKNIRDAVMPSMPEVVIIGVGEENQKFFTENDIEIVNDINKSDACIIGSGIGRDMSTEIFINSILKQINIPTVIDADALYLMFESTLNELNNNFIITPHIYEFEKLTQINHIEALENPYQALLRYRQKTNASIVLKDAVSFLMHENDIYINYNPRESMGKAGMGDVFAGFIGALLARRLNVLEASKLALIIQSKSFNILSKKFGNDYIQPKDLANISYKILKRI >gi|343385998|ref|AEM21488.1| hypothetical protein, complement(973527..975146) [Brachyspira intermedia PWS/A] MLNTNNKLLENISNEFNIENNEVENIVQKLFSKITSSILNKNRFYIYKVGILSLDKDNNIILNKEDEDFDESLESLNVTNNNIKNIFLEKSIYKSIFKNIADISKEENVYIKDFGTFSNTSFESDNHLKIKIKELDNNEIVEDILDELDSQIKNKSINYNSNNEEIEEIIEITDEENKEEENKSIDNNIVGNIWKNYNSIDLNSMIKNLNEKEVIENKSEKVEKLEESKINNNISDNNNNDYPEMKEYSKEELLDINHFDKEDLEYNDTDNKEDIEVDNILEVNIQKELFNKNNNNNNKTLNTNIKKSGNKTMDKKNIKRNNSLLVGIIRVIFIIIIIFILGIASTIYYTNNKMISGNNIENRKLYDIVNEYFNQIDSANLSYITSKDMYYWDIAKTIYGDATYWPLIYAYNNDKFKISNVIKKGSTISYRNIPDFYSVREIKYLNNTLSKSYIYVYPILTNDNKYNHALWALKLSAYYDLNVFKNNSNVIPEETYMEILNNNSTINTTYNDLIKYGQLNENIVLSIFDIIKEALGIKK >gi|343385999|ref|AEM21489.1| thioredoxin, complement(975254..975571) [Brachyspira intermedia PWS/A] MSVQELKTDNFEAAIKGDKAILVDFFAEWCGPCKMQTPVLHKVADQYADKMNFGAVNVDEAEEVAAKYGVQSIPTLMVFKGGEMVKRAEGMKNEAQLKEWLKEYL >gi|343386000|ref|AEM21490.1| transcriptional regulator, MarR family, 975785..976189 [Brachyspira intermedia PWS/A] MKTNSIFARKIMYEANKIGLTSGQPKVLYFLSKFKEADQKTIANYLEIEQTTVGSILLGMEKAGLIERKQHEGNRRSLYVSLTDKGEEISKAMLDIFERIENEAIKNIPQDKQEELKILLIEICKSLTDNGVEQ >gi|343386001|ref|AEM21491.1| hypothetical protein, 976186..976854 [Brachyspira intermedia PWS/A] MNKEIFKNHFIERCIIFLIGLYLMSLGIAFSIKASLGTSPISSVPYVTSYISGLSVGETTIIINILFIILQIVLLRKKYDLFQLFQIPALILFGMMIDFSQSLIKDITYTNYFQQWILCIIGILMVGVGVSIEVMAKLVTTPGEGLVLAICKVFPVKFGNTKIAFDVTLVLISLTTILIYLGHLEGVREGTIIAAIFVGFIAKLVSKPLKVLEDKYLIGKTI >gi|343386002|ref|AEM21492.1| 3-oxoacyl-ACP (acyl carrier protein) synthase II, complement(976991..978244) [Brachyspira intermedia PWS/A] MSERRVVITGLGIVSSLGNDVKTFWDNLLNGVSGIKTLSKYFDPEKEQLITKIGAEALPVEGDYYSDKKMLRRLDPFINFGIYAAHHAFKQAGIEPKTGFDPLRAGCVLGSGIGGMTTLLSNHKIILNDGPSRVSPFFVPMQIINMTPGLISMEYGMNGPNYSTVTACASSNHSIGLGYKHIKDNEADIMVVGGSEATINPLTIAGFNNARALSTRNDEPTKASRPFDKGRDGFVIAEGAGILILEEYEHAKKRNANILAEVCGYGFTADANHITAPLEDGAMGARAMSLAIESAKISPDKISYVNTHGTSTPVGDIAEIKAIKKALGEDHAKKIKINSTKSMTGHALGAAGGIEAIATIMSIIEGKVHPTINVEEQDPECDLDVVANTAQDYKIEYAISNSFGFGGHNASIVFKKI >gi|343386003|ref|AEM21493.1| acyl carrier protein (ACP) Contains: Beta-hemolysin, complement(978329..978565) [Brachyspira intermedia PWS/A] MALIDEIKDVVANQLNISDKSKITDTASFVDDLNADSLDLVELIMELEKRYEIKIPQEDQEKIKNVADAAKYIEEHKK >gi|343386004|ref|AEM21494.1| 3-oxoacyl-ACP (acyl carrier protein) reductase, complement(978642..979391) [Brachyspira intermedia PWS/A] MDLNLKNKTAIVTGSSRGIGKKIAETLAKEGVNVVITATNLEKASQVAEEIKSTFNVETFAIQHDAKSSESCKEVVAKTIEKFGSIDILVNNAGITKDMLVLQMEDNAWNDVISTNLSGTFYMSREAAKNMLRARKGKIINISSVIGKMGNAGQANYAAAKAGIIGMTKSMAKEFAPRNICVNAVAPGFIQTDMTGVLPEDTVKGIMSITPLKRLGTPEDVSNLVLFLASDMSNYITGEVIAVDGGMSM >gi|343386005|ref|AEM21495.1| phosphomannomutase/phosphoglucomutase, complement(979618..981030) [Brachyspira intermedia PWS/A] MPTLKTSISGIRGIIGDGLDIRAVVDYTAAFACLFPKKAKVLVARDTRITGESILNAVVSTLTASGINVIDIGITPTPTALYMVEKLKIHGGIMISASHNPIEWNALKLIGKGGHFLDEKSVNELMKLYDKKESRFVKALETGTYEKIDNAIEEHIKRILRWIDVEKIKKANFKVACDYVNGTGLFATPPLLKALGVKEVSINNQHTGKFAHIAEPSAASMKSLSDLVKKNKVNIGFTQDPDADRLALVLDDGTIISEEYTLALCAKYLWLVGKGNAAVNLSTSRMIDDLAKEKGYSVDRTKIGEINVSSHVVKNKLYFGGEGNGGIIVPAVTPGRDSLLGIALILELMAKTGKTITELVNEIPKYEIVKEKLEVSKIDEDKFLKQVKEEYPKAKITTIDGIKIDLEEGWLHVRSSNTEPIVRIIAEAKSKKDAKDLITVAMNMIKGVKTPVKPTKETKPKKESVKKTKK >gi|343386006|ref|AEM21496.1| cAMP-binding protein, complement(981138..982319) [Brachyspira intermedia PWS/A] MNKYNILNFKKSSIIFIKNKSPKNSFYIITKGKAISYGTLDYNVEFNKGDILGLVNVVLNEPYFYNIKALEDMEVIELTLDEIINTKNRDLTIKIYKYLKSSLETWLGRYYLLISESKEIIKGKTKEEILNMAKVYSKNGFDHAAYRLYNEYIKRFPDDRENIDDVKNKLSNIEPIEEPLSKKDNVFHYKKGYCLYTELEGSDKLYIIKSGKIGIYNVVNLHQITRSIYSKNSIIDGYNPVLEYQPLSTSAIILEDSVLKVLKKEELLNIIENDNSIKLYYIRMLSIKIRNTILKIIALNTDDMLAKLLITLYYIVKTETLPNNIDSIKLPYKVNDIKTILNIKNEETLKRELNKIRAISISNDNYINITDIRSFMAEYKNAINRVTNMNHHA >gi|343386007|ref|AEM21497.1| 3-methyl-adenine D glycosylase I, complement(982390..982944) [Brachyspira intermedia PWS/A] MSEICKWAKSEIEIKYHNEEWCQVCHDERKLFEMLILENMQAGLSWKCILDKRENMREAFDNFDYKKISKYDDKKINELLNNKGIIRNKRKINALIVNANKFMEVQKEFGSFDKYIWSFTDGKQMDNKLDDESPLPARNELSDTISKDLIKRGFKFTGSIIIYSYMQAIGIVNDHSINCSYHNK >gi|343386008|ref|AEM21498.1| hypothetical protein, complement(982994..983494) [Brachyspira intermedia PWS/A] MSKYNYTEEEIINYVNGIKVSDDFLEELESNADLQREVSSLKNDLFLMENIEDSNMLKESKIKPIINIKDSIIDYMLYFSKLTPLASRGEEDNKIKDVYVYKNIEIYKSDNQYYINISNIKNWCVIEYNGEKIVNIFGQRDNYSSELKNGNYNIKVDNDEVSINIE >gi|343386009|ref|AEM21499.1| RNA polymerase sigma subunit RpoD, complement(983496..984374) [Brachyspira intermedia PWS/A] MIDDLFIKKLILEYKATRSIEALKEINEHLSNYIYNYPRKVFGVFHDEALEFYSYYIERIDNIIIKYNETDAKFITWFTYTLRSHYLNFLDHKKRKDKYKKQEISIDAPLCGKEALTLHDVLYDSKSYVMNEYTNNYNESNIEKLSLNMFNYIEKEFTDRDSIAFFIHNLELFINLIIQPLMKYFNINYEEAYSIIEKARATYIKKYNEIIKQQDKIAKINAQIEINNKRGLFTVHLASKKQNYIKKLHSIKINVPYEFIAKLLNITNNAVTKIINKIKSSLKEHFNNLSDL >gi|343386010|ref|AEM21500.1| hypothetical protein, complement(984364..984828) [Brachyspira intermedia PWS/A] MHTIKNTLEEYSDRKLYQNINLANYIKISQKWDDIMGEVLSKICYPSFYRNAVLTVTITDSVWANEIFMNRNNIFKNIKKETNIEVVELKTRIGEVNNNKRVKNTNKKNIEEEKELTKEHKEWIENTIKESGIKDERMKEIFANILKYEDNDDR >gi|343386011|ref|AEM21501.1| TPR domain protein, complement(984888..985865) [Brachyspira intermedia PWS/A] MISGCKVSKKMHVNRIILILFSLIALSLYSQTNDTFNYDRKNLSRAYRYYNAKNYKKAAELFEYEIEYSPILKIEYFENLANSYMNLKDYTNMLRAARNGIIVNSFSHKLHFQKGYALYKLGDTNKAIDSIRYSISLKPNDAYMNNFLGLLYLYVEDYKQAESSFLKATVYSPNNVVYMVNLAATYERDKNFSSALNTYEEAYKINPNYRGLKDSIDRNKNILARISGNTNITIEDKPQINTNQNNKVITYDEDVEAKPIEMDIMESATNNIATNNIINTNMVMTNDFINTNNIINTNNIITNTQEDAAETNTAIPQTNTQQNDN >gi|343386012|ref|AEM21502.1| hypothetical protein, complement(985825..986667) [Brachyspira intermedia PWS/A] MASLSDKEINATLTKIRNEYEQGAEKYGSKIYNVNSFNDRYREALQNRQDLSNFLIVEIKILEDIKTTLRDRELERQRKKAEEEKAKENSFMNKVDNMIEKFRSATEKYPLEDMHPKADQEICHLYGAFKELYNCFSVIRFFSCGPASDYVVETAVKDYDNQFQKFIIPVGESKVPQIFSDYVFALDNGDNSSRAEQFILKESGFFLHAFIEKMTNIKQLALKASSDGEIVLPDYLNVQSPRVYKFFKGKTKEEMYDATIAYANAMINDFRLQSFKKDAR >gi|343386013|ref|AEM21503.1| hypothetical protein, complement(986903..988174) [Brachyspira intermedia PWS/A] MDKTLYSNYINILKEELIPALGCTEPIAIAFAGAKIREIIGNIPEHITVKCSGNIIKNVKGVTVPNSGGLKGIDTAAILGLVGGDASKNLEVLSSIKKEDINKTKELLNNKEFCTCELIEGDENLHIIIEAKYKDSNALVEIKNAHTNITRINKNGEELLNSNNSSNKKEEDLRETLNIKEILNFANEVNIDDIKDIIKRQIELNYSIAEEGLKNDYGSSVGKTLMKYYGDDIRNKAKAYASAGSDARMGGCSMPVVTNSGSGNQGITVSIPVIKYAEEMKVSEEKLYRALVLSNLIAILQKKHIGKLSAFCGVVCAATGSASAIAYLHDCDYKTICDTITNALCTIGGMVCDGAKSSCASKIAEAVDCGILAFNLARDGKVFKAGDGLVKNDIEATIDSIGRMAKEGMKSTDVEILNIMIDK >gi|343386014|ref|AEM21504.1| putative galactokinase, 988396..989577 [Brachyspira intermedia PWS/A] MIPRLHLKIVARFREVFGHKGDTKLYFAPGRVTVIGELIDYSDGDTITSAIDRGTYIVARKRPDNKINIYAHSFKARKSFTLDDLEKNKEDEWAIYFKGVFSVLLEKGYKIHGMDIFVYTDLPFNTSLASSSSLCACLTFATLDINNIKDVEPIEMAKLSYEGEIKYASHRTSLSDHVTIFLAKENTLFFFNMKTLKYEYFDFNLGDYCMAVVNSNKKRTSSDSEYNARKRECENALKKLKEKKSSLKSLSDLKVKDADFIKETLQNKEQRRALYVSAEQDRVNQAVKAIKKGSVKDLANLILKTHDGLSKLYEVSTAELDILVEEAMNMDGVLGARMIGTGFGGGVLLFLKKTEVENVIENLYTHYKERTRRDADVYILKLSSGTRILPTEE >gi|343386015|ref|AEM21505.1| peptide chain release factor 2, 990430..991368 [Brachyspira intermedia PWS/A] MKERMLLLDKIEPVENLIKNSNNIYELVEMAIESNDAEMEKELETECLELQKVFEELETKNLFSGEFDSKNAYLTLNAGAGGTESCDWASMLSRMYVRFCERHGFTVETTDELPGDEAGIKQISFYVQGLYAYGYLRSEIGVHRLVRISPFDANAKRHTSFVAVSVMPDIDEDIEIEINPADLRIDTYRASGAGGQHVNKTSSAIRITHIPTNIVVQCQAERSQHNNKDMAMKMLKAKLYQLEKEKLDKEKQKIAGEKTDIAWGNQIRSYVFQPYQMVKDLRTGCESGNMNSVMDGNIDEFISSYLKQQIKK >gi|343386016|ref|AEM21506.1| hypothetical protein, 991511..992080 [Brachyspira intermedia PWS/A] MLKKITLVSLMIAILVVAVPKKASAAYSDGAAIGASLFFGYPNQGLTLVGQFDGVPLMFGVQAVANIFDSRYQYFGVGLTMDWWGLKIPLGRAGESDVHFYLGPGLAADFAFGSHGIWSINAGLRMPIGFSFLIKKQWEIFLEPAPVVNVIHADGNGFSLLGLHFGDENHWYIEHFLHLTFQFGFRYWF >gi|343386017|ref|AEM21507.1| hypothetical protein, 992266..992775 [Brachyspira intermedia PWS/A] MSKLYADYPNGAAAGFFLRFSFPSQASLGVTGKIDNFPLVFSGILNIGISTKGWAWFGLSANADWWGLKYRIGKAGDSDAWLYFGPGAEAVAEFGNNYWNLGLGFRLPLGVSFIVDRDWEIFLQISPGLNVIAVGSDGFGTFGWYPSHTGWTFAKFFRFSGDFGFRYWF >gi|343386018|ref|AEM21508.1| CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, complement(992842..993315) [Brachyspira intermedia PWS/A] MISAVLALIFLIILEITDALDGAMARKFNLVSDLGKVLDPFADTVFHITMFTIFLYEGSMPIWMYIISLYRDMFSMFIRILGGLRGFAVAAKFSGKLKTASRAAAVVIIFLLKILKYTEISLPYEQITYYSLLVVTIITIYSFFDYMPLITGKSNKK >gi|343386019|ref|AEM21509.1| hypothetical protein, complement(993439..994461) [Brachyspira intermedia PWS/A] MNKNVTKIILLLIALAVISVAAFLTTKKSREKIEANKPRKQLFELNETNVTKYELKYAEEPIIVEKIDETWKVIAPSNNYKIDQLEAFANVKNFNTLNIDTIITNLAELDSFGLENPSNEFTVWEGNKEYKIFVGNKTADEEKYYVKYNDEYFSVELIYIEALKKTIDMLRDKQIFDKTIYVDSVVKTESNIRDYTNTIRKENRTNWVVDGVDEEINLNKAYRDFEALSLVKATGFVYDENMLKYLNRLFRIPDATVTIYMEDNTKIEYQLVYDNNDNRVYVKPKSGIIYEVDYNIYSAAMRDRSYYIKTEDDDKEMNNENDPYMDMAEESMRLDENLQQ >gi|343386020|ref|AEM21510.1| putative ABC transporter, permease protein, complement(994505..995230) [Brachyspira intermedia PWS/A] MQSISYTINKSNVILKKELRHIFFSPIAYIFSAIFLIVSGVYFFSRFFILQQNDMQDFFSILPLILSLIIPPITMGLLSSEFSSGSYELISTQSVSTLEIILGKFFSAVIFMLFALIPTILYPITLSFLGRLDMGPIIAGYIGSVFLIMALCAIGIFASSTTKNQIVALIVGLAIMISLNMFLRYLTLLFPASVNFIEVISGDYHFANIARGVLDLRDIIYFLSVTVIFLYLANIMLENRK >gi|343386021|ref|AEM21511.1| ABC-type multidrug transport system, ATPase component, complement(995231..996178) [Brachyspira intermedia PWS/A] MISVENLNKYYGDFHALKGVSFEIKSGEIVGILGPNGAGKSTTLRILTCYLSPTSGNAIIDGKSILNNEREVKKVIGYLPESAPLYDDMSVFDYLVYMAEIQELERNRLSERLHYVVDACSLKDVISKSIGELSKGYKQRVGIAGAIIHDPKILILDEPTNGLDPNQIVEIRELIKELGKEKTVLISTHILSEVEATCSRAIIINQGNVIADADPKHLTLNNKENNKTSVRIKLSIKTNDDKNKIIEKLKKIENIYDVKAEDNGDLKDITIYSNEEEPREKIYTVIKSTDWIIYEMFRERENLEEVFHTLTKGDK >gi|343386022|ref|AEM21512.1| ATPase associated with various cellular activities AAA_5, 996405..998072 [Brachyspira intermedia PWS/A] MELSKEKINYIIEKLSEGLYEKEDVISFTFLCALARKSVFLYGPPGTAKSLIVRRIASAFKDSKYFGQLMNRFTTPEDVFGPVSLSKLKEDKFERQTEGYLPKADFVFLDEIWKSSPAILNTLLTIINEKVYRNGSIEEKVPLKILVAASNETPPKGQGLDAMYDRFIMRLLVNPAQDIDNFKSLIVDKDIDFNADLNEEDKISAEDLESLKSNIEEVEVPSNILNIIISIKNEIDEYNKGNNESIYISDRRWKNIVYILKASAYFSDRKEILPSDCFLISHCIWTLEENINAVNNIVKKSIMRFFNNSNEEFDYDKIYDEAEELRTNIDKDSVSDRDEYENEINIKGKRYFPIDVFYEYKNTHGNNRVSIVKLYIEIDKINNNTQFNPLMNIYDNDAFNNANNRNPKYNDYYDNYSNLKNSTDYVVADNVFCSFTNSNTIHIKTNNYYNRFVNKNGDIASSLNMSIPIKFRKGDIKPIEYNKRDSYMHVCSDLLNTVNNKIESYESDLKSMIERCDSVFINKRYIQKFIYNNDYLSSLKSLKINIEHCIDKIKG >gi|343386023|ref|AEM21513.1| hypothetical protein containing a von Willebrand factor type A (vWA) domain, 998088..999551 [Brachyspira intermedia PWS/A] MSIHDINNILKETKYKLKERFSKYDIFMSNNDMQKEITKKINDFNYNLEKHLKDDNPFKDSYFIYEEAKNSFKENEADKEALLKDIENYRLIAGDDNAEFFYSKINSLEKDEYNNEIIAIRKSVLNSWKDELDKQYMNWVLNEIDQYRKKFFKDMENFFDYLNNLKYIQDALGEDTGLLFDLSIGKLLKKDIEYIKRLLNLLKENSDIKRLCDMLGRFIKSEETIKTEKILRKETFSTKIRDINSEEEIVGITYSRDIHNILPQEKLLLAEGVLETLFGIKYFENRVLTFKKEGYIDSYYDRYIEEEIQVKEEDKKGPIIICIDTSGSMRGVPETISKALTLYLATRAMKQKRNCYLINFSTQIETMDLTYPNTMDNLIDFLRLSFNGGTDAIPALRHAIKVMNTENYKKSDLLFISDFVFNGFTDEDCKLSENQKKNENKFYSLIIGSTPMFNVENSIFDYNWCYDSSRGSIKELTGNMYSSIFGH >gi|343386024|ref|AEM21514.1| ribonuclease III, 1000045..1000779 [Brachyspira intermedia PWS/A] MNIDRILNNCQTAIKYEFRNKDHLLEAITHRTYANESKKKMKYNQRLEFLGDSVLSLIISDYLFKKYNSSKEGLLSKVKSSLVSQKSLADISKELKLGDFLLLGHGEEASGGRYRDNMLEDLFEAIVGAIYLDSGITSASKFVMRAYRERLKNLDIENFDKDYKTIFQELIQKKHKTSPIYKSYEYYDDNNHEMFKAEVYVNDKNFALGVGKSKKEAETNAAKKALDKIEMASMAIKKNKKINK >gi|343386025|ref|AEM21515.1| ribulose-phosphate 3-epimerase, 1001088..1001783 [Brachyspira intermedia PWS/A] MASINGVGEHSNKGKIMGKINIAPSILTASFTNLEGTIRELEEAGSDYLHLDIMDGVFVPQITFGAKVVSDIKKISKIPLDAHLMIVNPEKHIDDFAKAGCDIISVHFEGNIHIHRLIYQIKAHNIKAGIVLNPHTRVDVIEPIIDDIDYLLIMSVNPGFGGQKFIESSIKKIEEAKKLIGNRDIILAVDGGVNLKTCGKVLEAGANFLVAGSAIIDSDNKKDTINKLRGN >gi|343386026|ref|AEM21516.1| hypothetical protein, 1002189..1004201 [Brachyspira intermedia PWS/A] MEELYNSNNDEKEEENSDSPKVFINNAQILESGQILITPPKPDEKTFEDWKRTSDEYANKGEYEKAIEAYLRILWTDPNNTEYWEHLSSLYLNGGQYKDAIYAISECIKLDPNNHKYLYKLGGLYILNENYKEAEDYLLNAIRLDVNNYKYFQRLGILYYCINQYDNALSLVLKSIELQNDDYNNLLLLAYIYDAKSEYDESIKSILKYLEHTEKTSYNKCFGYQYLSILYMKNKQYDAAIETLSKNLDLFPNDDFNYYLLANIYILINQYKEAIDAASKAIDLNKDNFCNSYILANAFYRNKDYDKSIEILFNILKLLKENHKEEKLPNIKAIRLKNRILELNDRAIEELCKNLDLDEKNYDYYYLLGKAYNRIGEYNKSICFFLLAYELDNENIYNLHWIGSTYNQNKNYNASINFLLKNIDLSSDIIDSYYWLADSYYNIGKYEKVINNSLKIDNLKIEDDNIKYLSILGKSYYKSENYKKSASVLSKVLEKDEDNLEILTLLGKSYSAINNHKKAIEMFVKYDSLNHNDTDNLKSLSKLYYDNEEYNNAINIFLKLTESHPDESEYWYYLGNSLKNTNQYKEAKEAYKKALKINPYNQTYKEGLKSVRPNFLKSASSLVTIFFILVIIVCGIFLFKAKANFGMVIPLFTVIIILMFKTISLLKNSK >gi|343386027|ref|AEM21517.1| hypothetical protein, complement(1004555..1004680) [Brachyspira intermedia PWS/A] MTVIIKFNKNIFNILNSNIYKKFNLILYETSLYEIKEFIPK >gi|343386028|ref|AEM21518.1| permease, 1004686..1005564 [Brachyspira intermedia PWS/A] MWDILMSNNNNNNKSILLASTAYIIWGLLPLYWKSVQNFDSAFVLGLRVITTFIFTLIIIIYKKANLYKGIKPLIAIIIAGIFLGLNWYLYIYTVNSGHVLEAGLAYYIAPILSILVGIIVFREKKTPLEYAAIILMFIGMIYQTITLGRPPIMAFFIGLTFSIYGLFKKLTIYSSWESLFLETTAILIPSIILSAIYFPKTPQPIHTWVSLMFAGVATGIPLYLYAKAAKGLQVSTLGFLQFLLPFFATLLAIFVYKEEVNLNRAITLAIIILAAILYAISIFKNSANKDN >gi|343386029|ref|AEM21519.1| hypothetical protein, complement(1005653..1006399) [Brachyspira intermedia PWS/A] MKKILSIIISLTLTIPLYSIDVQSLFNLSNNGEIVYYKSDNINNAEYSQAEKLKSDLQDKGYKVYSIVIADVLPKEGNEFIALVSSTQGDKIYIYNKDNEEFSYKTDKLGKNAAIDLENFYDKKNEIGIIKYYIINDDGTDRDIYMYMFRIDGASVKFIADVVFYKEINSMKTSVITQMDNIFEDIDGDGIYEMLVESRETIGGGNDRVEYQIYKLSKSKGKYECIMSSWLEETPVDLSGYFRKRIQK >gi|343386030|ref|AEM21520.1| conserved hypothetical protein, complement(1006423..1007082) [Brachyspira intermedia PWS/A] MRKIVLIIITICIAYIYAYSQDANFQNIYEKMKEKYSAMYPRKFEAYIDGKIVQRQIDTIPAKSYTKTKEDIKLRFTFEKGYKPTLILENVDTFYRNMFSVFEGALETVGFYVLVGNNNTYSSLSKKITFENIEDKKDEYKITLRAKGENENYSVTYTVNKETYIIERAEYYNKKSKIYDVNISYEEVDDYTLPKIIKYKSSDGKVNSEIEFVDIKTYK >gi|343386031|ref|AEM21521.1| conserved hypothetical protein, 1007296..1007601 [Brachyspira intermedia PWS/A] MSEEQNEQLSETGIYCANCRYCVLFRKASGIDGNQYLLRVKCAQEQWRKKLGEEKMYKYFTVARRTVEKCDDYKEMGDLRSFLKTLRKSLPVRDEVYTIKK >gi|343386032|ref|AEM21522.1| response regulator aspartate phosphatase containing TPR repeat domain, 1007653..1008045 [Brachyspira intermedia PWS/A] MISCASAVKVSVEEEQYPKIIAEKGYTEFGNKNYKTAIAYYQYIIDNFDRENYAKDVAWAYYEIGFCYYYQKKYEEALKYFDIVLNNFTVLPPKILAQKVMQDIYEEKPKLKPMEVIEEEIEVIEENIDS >gi|343386033|ref|AEM21523.1| hypothetical protein, 1008135..1009769 [Brachyspira intermedia PWS/A] MYSRGEGEDYSLTTYILYSLIFFKSYIPYVIALSVYLSFFKAKYLYQESISKVIAYPIGLIVLLVCFYAIYDYSFTNFFISKLKEHNSIRDAKIYYEYELTLKNRAYEAAKEELMAGNLDAASTLAEEALFYDKNDGNTLLLIKSIQKEKMIRESKIHEEKFNNINNLMSLGTREFSLSNYNAANNYFNQVLELDKNNPMALYYMNRISIAMNKKPLYYGNATPQEASIYSRLSETINLYESGYLWKAYDNISKLYLNYPNIAEINNYYSIIRDAITRYDFFIKEAQEVREAYINNPDLLKYSSVFSHNGINIMLSKNVFLSSSTSAMFKNSLYIFDVSLMELDDELKIVRCENFLFGKIADSFNSTNNTKNIILKAYFDTNKNEYIYNDAISKVIPINISYSTLDIIKNYTSLNLRYVNLLELFTLRKEIQKFGYSNKDINFELLVKNIEPIAYLLLFMIIAYYSFRFRLAASTDKFHFYNRITGVLGTLLFVIVYKVLIDYLGMLMLMASHITISVLIAVVVFAFLILYVIFQMARIPRDVR >gi|343386034|ref|AEM21524.1| putative dimethyladenosine transferase, 1009759..1010604 [Brachyspira intermedia PWS/A] MLDNLYSKREVTEYLKSKSIFPNKNRGQNFLCDRNIAYNIANIVPNNLSRGKYALEIGGGLGALSNMLYNIYKDNLTIVEYDNALYNHLIEKFNNVNIIHKDILTFDISNSENKYDVYGNIPYNIASPIMEWLLHESYNKWNYAVFMVQSDFAQRLIAKENTENYSSLTLFANFMSDIKLEYNVSKDVFYPIPKVTSSIISITPKEVDIDIVEVFKSVSKTLFHNRRKTIRNNFISSPYLNINKEHIDEILSKANIDGNIRGETLPIDKVTELSNIVKQYI >gi|343386035|ref|AEM21525.1| hypothetical protein, complement(1010601..1011176) [Brachyspira intermedia PWS/A] MIYNINMSKTLKKFITILIIISVTLLLSSCSQRTKTITLTDIAIDVPEDFQVGFLDGTVAIDNSVEFNESYGVERNTGIYTIVYTKYKLAYSGSINLENAKNRIINGLRNHPSIKEFQVLSEEIPENIPNSYKILSSFYYGPNETYHKSFTMLHNNGILQIMCMYNANSKKDDKEIENIIKSVRILDNTNN >gi|343386036|ref|AEM21526.1| pyruvate kinase, 1011325..1012758 [Brachyspira intermedia PWS/A] MRKTKIIATLGPRWSSEDMVRKIIENGADVCRLNFSFGTYDEHLERINIIRKVSSELKKPVAILADLQGPKIRIGKLKEPITVKEGDIVKLSGYKETNDDSIIPTTHSNIAHDVKSGSMLLIADGTIQLIVESSDEASKLVVCKVITGGTILSSKGINLPGAHVTTEVLTEKDVSDALFAAKNGVNYLGMSFVRKAEDVIRLRKILDDNNLQDVGIVSKIENTESLENLEEIIKHSDGVMVARGDLGVEIPFGEVPVWQKKILRMANDIGKITIIATQMLESMTKSPVPSRAEASDVANAVLDGTDVVMMSAETASGDYPIESVKAMVSIVEAAERSAIRYSHDNMSYLDRGVNDALTDSASYLSYCLDNKVIIALSRSGYTVKNLSKKRPKTPIVFMSADTDLCNRLAICHNVYTILMPEDLNFSAGISHGGQIDILEDTLIKHNLANHGDKAILVSGSKWQGRWQENSVRVVVVH >gi|343386037|ref|AEM21527.1| DNA repair protein RadA, complement(1013303..1014691) [Brachyspira intermedia PWS/A] MAKKNNTIFVCDNCGESTINWMGKCPSCGSWNSLKPFTEPSQDTNKSIRERTSTSASDKASLTPLKKIKTNDRTRISTNIDELNRVLGGGIVQGSVILIGGEPGIGKSTLLLQTASNIAKNEKVYYFTGEESLEQIKLRADRLTLEDSDFLISSESNCDNIINTLLDDTPSLAIIDSIQTIYSPSTNSIAGSPAQIKNCAWALMQTAKLKNITIFLVGHITKEGTIAGPKILEHIVDCVLYFEGDDKGIYRILRAVKNRYGAVDEVGIFEMAERGLMEVKDPSRVFTRGVNESVFAGNVITPVIEGSRVFCVEQEALVGSSAFGYPRRLTIGYDQYRLLIIIAILEKRAHLNLSNQDVYINVANGLNVKETASDLAIAMAIASSMSGISIQRTTAYIGELGLSGEVRPVRFIERRIKEMQKFSLKEVYISKRAVKEIKNPGDIKIIGIDHISEAVKRLGIGN >gi|343386038|ref|AEM21528.1| putative ABC-type transport system protein, complement(1014740..1016782) [Brachyspira intermedia PWS/A] MTKKKDRIITFSLIVVIIILINAIANQFTPMIDLTKDKVYSLSKESKNLVKNLKEPMSVKFFVTPNLPPPFSTYEKYIKDLFEGYKAAGGKNISFEVIDASKHGDLASQYRINPTQISVLEKDQTQTKVAYMGLSFIYGDSIETIPFVQSTEGLEYNIDTIIRKMMDKNDRLARLENNLNVYYVSSKEIYDLLPIGAMELIPDSIMQAVADANKDLMNKVRFINVDMSNPTAENEELLKKLNVKKIEWDDIKDPNGNIVANKGSAYFSLVLENGDDIRQLSTSYILYGAFDEIKNEISKNIDSMLGLKATIGYVQGHEEANYITIPPQFGGNPNDAYDSVSEYVTEIQGNYNFEAVDISLNDIPSSIDALIIAGSKTAFSDYELYKLDQFIMSGKPVLFMLNGVEINQNDPNAQMYGPKLIPVTNRLNEILPNYGFTVATNMIFDDNAYKAQLQQGMPEQKMYYIPLIASENINAKNDITKSINLLLTPISSEIITNTNNTDIKVTPLIYTSDKSWVETENFASSMTGMPQDSNRLSKRLLAASFEGKMNSAFAGKDIPSSTNAQNNINNDINRINSTTSGRVIVLGSYEMAKNSAYTANKIFLMNLVDYMAGDSGLMSIRRKGAVFNPPYQVPETVKLFVRVINIVMLPVAVIVFGLMLWSSDKKRRQNIFEKFNRKAE >gi|343386039|ref|AEM21529.1| pseudouridine synthase, 1017144..1017860 [Brachyspira intermedia PWS/A] MDIEKEMSNYINPLYEDNHIIVAVKPPNIPTQGDITGDISFFENIKDYIKIKYNKKGNVFLGLVHRLDRPVSGVIVFAKTSKAASRLSEAIRDRKFEKTYYAVVNGILLEKEGKLENYLIKKTNKLGNIAQVVFENTKNAKIAKLKYNVIKEDVIKNLSLLKIELETGRFHQIRVQLSNIGHVIYGDRKYGSYIKYDRNDVPLALFAKSLKFPHPTKDEEIYVEADLPSYNPWNIFNN >gi|343386040|ref|AEM21530.1| TPR domain-containing protein, complement(1018617..1020512) [Brachyspira intermedia PWS/A] MVYKKKTYNKRLAKYKNIQMIVFILSIGALGLIAILSLNVAIIQGKVKLNSQIVDDYTLAKEYYNNKDYNKAKSILKKEIRNTIDPKKEYEANILLGKIYNETKDYDNAIKIFNTMTNSLYLDEQLKHNLGISYLKKEMYDEALVSLENSLSINSNYIPSLLTLGRFYMERDLPRLAKGYYERVLTLEENDEALFYVGLIALNEGFQSVAYDTLTKLVRRSKGEYADKAATILGDIYVISGDTDSAIEMYLKSLVNSDTKPDSIKRLVKIYEQVEDYDGIKKVYEQILEQNPNDVDTILALGELYEKENAYDRSVKYYLRLVKMKDYTNTYGATGLLANAYYKGSMLKEAEANYKKIIMANNKDDLYKTALERLGDITYRQKDFMASLRYYQEIYKIETNNAIFMPRLGELELYYGNSDKGIKLLKESIAADVGNAFPSRTLAVYYESIGNNNEALNYYNYTLSKYPKDRESIYRAGMLYYKTKNYEKAKESLLIAANDDNNTILVRENAWITLATMMEEIRSYNDASAYYRQLVEMSPSVENYMLYGAFSYRRLQYNEAIYAYNEALNLATSKRQLFDINLVLGKCYYRMNELDNAEESYRNALSYDGGDSQAKDGLRQVLTKKELMYNN >gi|343386041|ref|AEM21531.1| transcription antitermination protein NusB, complement(1020484..1021029) [Brachyspira intermedia PWS/A] MSEEIDINSNNEVENTEAAPRKAVKKKMIIKSKSKENIKDLDLSSYGARRQARIYAVMSLYSYEINDRKETVNEILSFDYDKKIPENIFAFTRNLVEGTINNLERIDNLIEKYSNNWDIKRIQYVDKSIIRMSIYSLIFLKDIPKSVVIDEAVEISKIFSDKDSYKFVNGILDGIQEKDIQ >gi|343386042|ref|AEM21532.1| adenylate kinase, complement(1021164..1021721) [Brachyspira intermedia PWS/A] MLNIIFIGAPGVGKGTQSALIEKDYSISHIATGDMLRENIANGTELGKTAKSYMDKGELVPDSLVIDMLKDRIKKDDCKNGFMLDGFPRTIEQAKELTNILDSLNYKISAVIDIFASEEIIIDRLLKRGRADDNEETIKNRLKVFENQSKPVLDYYSDKAKIIKIESVGTPEEVYAKIKKELDVL >gi|343386043|ref|AEM21533.1| hypothetical protein, complement(1021828..1023426) [Brachyspira intermedia PWS/A] MHIRKIITLIIATILLYIPLYPFGGKPITMEKVRPYYTTDDTIKVDVFIYTNLGDNTNYNYLCFAVADAVANQIEYNKTLRLQSETNFVINPVDFEKAYNYKVFQFTNITYTSKTEGTNITIVTNYETTTYTNWGDVRSNVQLITPETQGFFLETNEMIFDYNGSNVILKGTNDFIQKVDIGRTYYEYSGDDIKKYIFTRESDIAIFGTVKYDRPNISIVTYIAYIKDRKITSYSITIPEAKIDEQIPNYALEIANRISYFDKTGVIAIDVTPNDAFVYVDDVFIGKSGQTLYVPALTTNNHRFTIKKENYETIDTMLAFEKTNENILLNFKLKELTESARVQINIPGEEESTVIINGVKETPTNVINRYFGFGTYSIKITNTNYIDYYGTFTVDSTNSLVLTPNMKKFQEPTLADKIFKNYERNTKIFLGLTIASAIFTVGTYIYAGEVLDSTMVNYYNQYKNDPNRPPINLNNYNTAMNIYIAGMVLTGAFALTAGVYYMLWINENNFAVEELSFNAGYSGVNLMYSWRW >gi|343386044|ref|AEM21534.1| aspartate aminotransferase, 1023739..1024935 [Brachyspira intermedia PWS/A] MDISKRIQRLKVSPVRKLNPYAEDAVKRGIKIYHLNVGQPDIETPKIFFEAISKFHEKTLKYEHSRGIKPLINKIQAYYDKLGIHYEEEDIVITSGGSEAISFAMLAIFDEEDEILVSEPLYANYKSFYDLYNIKYNAVRTYAEDGFHLPSREEIEKHITPKTKAFMLANPSNPTGVVYTKRELDDIAYIAKKYDLFIISDEVYREFVYGDRKAISFGTYKDIEDHVIIIDSISKRFSACGARVGCLISKNKKLMTAVFRECQARLSLPTLDMVGAAALYDLPDNYFDEALKEYDYRRKIIFEELATMEGVVAKEPEGAFYVLAKLPVKNAEDFIIWLLKDFNINNETVMFAPAEGFYATEGLGKNEVRISYALDSADLKKSMHILREALIKYREIDK >gi|343386045|ref|AEM21535.1| aspartate aminotransferase, 1025104..1026306 [Brachyspira intermedia PWS/A] MYLSKRVQQLKASPIRRLNIYAEEAAKRGIKIHHLNIGQPDIETPRVYFDAIANSCDMKTVKYEHSRGTKELIRKIQAYYKRLGIDYEEDEIIITNGGSEAILLSLIAIFDEGDEMLVAEPYYANYNSFYDILNVKRNIVRTRAEDGFHLPSREIIEKSITKKTKGYLFSNPSNPTGVVSTKRELDDIAYLAKKHDFFIISDEVYREFVYGDRKAISFGTYKDIADNVVIIDSISKRFSACGARIGCVISKNKEFMEAIFKECQARLSVPTLEMIGASALYDLPPDYFEASRKEYDNRRKILFEELTKMDGVFMREPEGAFYVLAQLPVKDAEDFAIWLLKDFNIDNETVMFAPAEGFYATEGLGKNEIRMCYVLDSKDLKKAMRILKEGLIKYKKEVEK >gi|343386046|ref|AEM21536.1| methylthioribose kinase, complement(1026609..1027871) [Brachyspira intermedia PWS/A] MAYKQLNINTIIDYLKTIDELKNIFSSFDDLEIKEIGDGNLNYVYSITNKKNDKETVILKQSVPFLRCVGESYPLEKDRMKIEIKALKEQYKLCPNLVPKVHYFSEDMCVVIMQNLNKHKVLRGEIINGIKFPKAAEHLTDFLSKTLFYTSDYYLDTKTKKNLVAEYMNSELCSLTEDFVFTHPFEENETNIYHEKLNLDEVKKFQRDSKLKIAAAEMKYAFMTKAEALLHGDFHLGSFMGNEEETYVIDPEFAFYGPIGFDIGKAMANFFIAYISQEHHQKRLGTNSKEFRKWLFDTAKYMLTGTLDKFEILWKKHLEETKPLYWNYPDGQKHSKEYIKTVLNRIFKDSVGFAGCVFIRRTLGLAKNKDISGIEDLIERERLDWICLNIGREFLINKDNIDNIEKVTDIVNKYSNVDKI >gi|343386047|ref|AEM21537.1| methylthioribose-1-phosphate isomerase, complement(1027892..1028935) [Brachyspira intermedia PWS/A] MHNNIATVRWTGEELYILDQTLIPITVKEIKLSNEQDAYNAIKELKVRGAPAIGVAAAYSLLIDLKSKTNLKADEFIKFVQKRAEYLNSSRPTAVNLSYALNRMVNTIKDKNNKTSLELYNILETEAKKINSEDVDICQKIGEYGNELLKENSGILTHCNAGRLAVSGIGTALAPMYIAHQKGKKIRVYADETRPLLQGARLTSFELQEAGIDVTLICDNMAAFIMSKGLIDLVIVGCDRVAENGDAANKIGTMGVAILAKHFSIPFYIACPSTTFDLNTKTGNDIIIEERDAKEVINFAGTQTAPLDMKVRNPAFDVTPNELITGFITEKGIIKAPYIENLKKAFN >gi|343386048|ref|AEM21538.1| anti-sigma-factor antagonist, complement(1029024..1029347) [Brachyspira intermedia PWS/A] MAIEFNNEYISIVMEANLATPEEIKSFVEDSDEACNIRMPVVVLDMKNVKEINSAGIAKILKLYKNLQSLKVKLFMTNLDESIKPTLKSLMMFSLIKYFDDPKDFAI >gi|343386049|ref|AEM21539.1| hypothetical protein, 1029592..1031331 [Brachyspira intermedia PWS/A] MMYNFIYCFYRYGDKMKKIGFIIIINIAMIILASCGSSQYKLDKKAGGNNSFETAQEINKDGIIGQLEGDNTDYYYFTFDGKASIIDFYVSNSTYSPVIMTLYDYNNNVIKVINEPDEIKNIETNSTTNDIDTNETVSSNNNQNKKQEEIIYTTQVMKNIYFEPSTNNTDENKYYISISPKDTVKENIDYMLILKKRDYKETDEKEPNDKISAAHIIDVNSDNRLYTIEGYYGQTYNPTLKTGDLKDMEVDAYKITNSSFNTYSISIELSGVPAIDASIRLYDQKGNWITMKDINNVGDGEVVDKLILYPYMSYYFILASTNAVNNIPYRVSIIAKPYDKYTEHEPNNKYSEAQTIEFNQTYKGAIDYSYDRDYYNFSIPIKSSVKLSYFLIDSQAINISISNDVLGKIITMPQTDDEYEISLSQGRYYLIFERDLTKEGWKKGISKARSYEFNMSISNEISGDYNYGYDLYNNTNTYEADYYNYSNNYLNDNTMPEEQFEENLESNFNNTNNVIIIRPEDYNSDYYYYSNEEETNAAENNDDYNNQDNTYEDSTYYNNQDNTYEDSTYEDGTYNNNDF >gi|343386050|ref|AEM21540.1| hypothetical protein, 1031435..1034692 [Brachyspira intermedia PWS/A] MKKFFKKKEKTEISSEQDNANKKKRRFKKRYIPLILLFLIVVGIAGARIYFNNERMKNLIENIVYSATNRKLEIGDFKYGLLFPKIEMSNVVLYNSDNFNNEENIKIDNFRLKFSLFSLFFLKLHVQDLSIDNLYVYMFTDESGNWNLPDMPPSKPKEEDTNKEPFDFSKLDFLKLKADVENIRINNLAFKADSKSFLTNVPNNGLIASLSNYNLHLDLHTKRFSLSQVMGISAPEVVKDIYLKSFISNSLAYNDSSIFFNDNPLFNLDVSYPKNPDGTENKDEIVIRFDFEIDEPNFSYNGKKRDDMQFAAHLLARYNIRTQSVSIENLSSELLNDEILKVIASANQIFSGNIGVNLDTLYARLNLNKVNSLASMFVPSLGINMSGMVNVDADKSTGTINNLTNAITIALDKINLSMGDTIAVNNLNSKTKVNFTFNPNNISKEDIKLEHNTTIDRVTALKLYRFNNTDVSLRILSSLNGALGVVPAINDPNKKSDTVLYVDNISTKYINSDIKVNGAVKFDEPTDLNVNVTSLPIANFSGGLARGSLNLDVHVFGKMINDINTTVNGIIKNFSYNLNGEVSSTATAKLNVLANANLLSQDVKVTALNLDLDNFLNFRSNLDLEGLGLKKGFVNISTFRIAPYAMKNWLSTKFAEILDSLPFEDDIKMTSALGYNLSLEDKFATVTNFSTFYVTEKQYKLQDVTMKVDADVNFGENLYANIRQFNLQSPANKLLVHVDGYFTPVIKNADLNYNVGLDTESLYLPFGIEIGGLFNVNGNLKNNIADGVFKTDKFFANMDSPDKMSIVLKGLTSNIDYHFDLTPTDNEVVATATRYTPLIEQVPNMFFEQLRVYLKIPPFIDDSIRIRDFSSSVRVQGHGLTIQDLKSSIYIGGEKFDDNLFLTSISNNTAPRRGAIHLPWLNVDLGSFNTSTIKYDMRVLASDINFKYLLAPENREKINDEKLLVNLTADIAGVGVSPLNNIRPTTFFVGISKMSTEFSKFLIEMIRPINPGISTVENIVQFGYDPNSVEFSISANKVFTTFYFRDQNLDKPNQQKQQLIAFEGDKFGLEPMPFSDVISYLEGGN >gi|343386051|ref|AEM21541.1| hypothetical protein, 1034810..1035337 [Brachyspira intermedia PWS/A] MRVLGGKTLIEAQVLGRYRQIDESAYQISTLSSEEDLNLIMVSTNVSDELAQGYKEALIRSMFNQDEINLYKTNYYIGENNGGYLSYIAFDVSKPKTTYSEERIKYIKEIMEKENTDRRTIAEYLILSDPKLSMANIKEVESALYRRNVQKLIDNSYYQLPDSSWTVYSNENTNS >gi|343386052|ref|AEM21542.1| HTH XRE, Helix-turn-helix XRE-family like containing protein, complement(1035415..1036998) [Brachyspira intermedia PWS/A] MIDFNLKDIREKILKLTQSQFAKMLGVRQDYISRLERNANNITLDLLDKLAENTGLTIDELTKYKKNSFESENPYLYENLINVQVIIDKINEEISTVDKKNNEKISELTADIFNKISETFDIVVYGRYSSGKTSFINAIFDKNIDTNPYSEETNNDEYFLNDDSKLFRIIEYKESLLDTRKYNNQNMFIYLCDINAFSQEDITNINALANFIDDFSNISVIFSKANIFDENELGSVIDKKFETLKNFIESSNNIKKIDYSSLRKRFFPFSINNTNLVKQIKDDFAENIKYAYYNRILTNINFITEIIDNKNEFQENDKLEVNLNKIKISVKEAFNEIYRNTLNIDSIIQSIDDNNVYRKKDDIKVLCNSINVNLDTQLYNMLAVTKEDFDTKEPNKIKTNLINLSIGILPSFNLLKSSTMKIINIVGVSLSFLPSVVFILSGFMSFSGNWKKTLSKKVIKAYEEENLVSKYNKTIDEYFNNYLTNLKEIDTKVKETLKYQEDAKMYKNIKSILNNFSSYIKAEKNKK >gi|343386053|ref|AEM21543.1| Phosphocarrier protein HPr, 1037375..1038544 [Brachyspira intermedia PWS/A] MENNDFISKEFECRNSIVTDNKTVNSIVDFFRTIEDKIEIENKNGKRVNAKSFIKMMGLDIKYGYRFTLYIYGTDRENNLKRIEEILEKKEFYTLEKIAELEKEQESEDNKFIQEEILYLTPDDKKDIIKEDIENKIKILKEKRDSLHLPSLNLNNNIVYIKNDDKTEIFDVINNDIADIIKNLSSHYEININENDLNVFLSELIEDVKVREMKYFYIYTFFSNVKKYFYNQFDSLFIKKMIGIENLKVEYSLETNKTFVDESIKTLEFILDDKRKSSDYSVNIYMISNSSNLSMDLYRTINIVQNIGKIYEIEESIIDNIAYKIKENFEYKNKINTSHNNEEYFDAIREFKEYLQEKFEAIYINKVLENDSEDSAIDYQHINLMVRRL >gi|343386054|ref|AEM21544.1| putative Metallophos, Calcineurin-like phosphoesterase, 1038545..1039240 [Brachyspira intermedia PWS/A] MKIAVIGDLHGKSCWKKLIEGRFDKFDKIVFMGDYSDDSWVTFTDEEIVNNLKDVIEFKKNHDDKVILLIGNHDFQYIVGYPTASRYRKSYSKEMHEIFNDNTDIFKTIHIENNYIFTHAGITNGWIEYIKQRYDIKDINIDNIYDVVNIIYKNDKDDCNIASFRRGGRSKFAGILWADKEDLSEDAWTGYNQVVGHNRVKPGSVIKKDSYAIYMADHFDTEQDKLSVLDI >gi|343386055|ref|AEM21545.1| hypothetical protein, 1039258..1039542 [Brachyspira intermedia PWS/A] MFPDKAPFHYKCRNCGYFFTTDKKLNAHSELSFVSLDFKDAEENEKDENVEKIFKIDSESKKESFIDKIFKKLSPKCPKCNEHAVVSVDYMVHK >gi|343386056|ref|AEM21546.1| putative divergent polysaccharide deacetylase, 1039601..1040509 [Brachyspira intermedia PWS/A] MKNIFVFILSVIMLCIFAFTFIKVQEYYNISFEYADNISKQSNDNTILQKNIEEKPSDDMFHLADINSPNTAEPILNKINEHSNCISIIIDDSGNTLNNAERYFSLANKYNITFAVLPDSYHSIDFSYAAYSNNVNVILHIPMEGSDYFGEQTLIRKGMNEDEVFRLLDYSFSKVPYAKGMNNHTGSVASSDESIVSHMLDYAKSNDKYFVDSYTVSDSLIYNMALEYGVKTARRSVFLDNERDYSSIMKQWRELIKLSKEYGVAVGIGHYQSEETLKILEDNLPLLIDEGIASVSITEILN >gi|343386057|ref|AEM21547.1| diaminopimelate decarboxylase, 1040552..1041790 [Brachyspira intermedia PWS/A] MIAYKNNILMCENIDIREIAEVYGTPFYIYSKNDILTKIRFLKEVFLPLNNTLIVYAVKAENNLSILKMMAEEGIGADVVSIGETLKYIKAGGKAENIVFSGVAKTEEEIRKSIDLNIKRFNIESIPEAVRINNIAKELKKKVKCSIRVNPNVDAHTHEKITTGITGNKFGIGIKTIKDNSDLLKSLSNIEIESLSMHIGSQMTDAEPFYKAILVMKDLIAEINSMGFNITDIDIGGGYGVRYNRDHSGFDFDKFKAESINLLKEMNLRVTTEPGRYFVAESGALIMKVEYIKEELGRKYVILNGGMNDYIRVAMYDAYNEIYPLVKKDNVSNYDFVGPICESSDFFAYSRECSVLEQGDYVALLDAGAYGFSMSSNYNSRLLVPQVMIDDNKHYIIRKRQTFDDMIKDEIV >gi|343386058|ref|AEM21548.1| putative iron dependend repressor, complement(1041917..1042333) [Brachyspira intermedia PWS/A] MKQEITPILENYLETIYNLEVEKNFKEAIRITDIADLVGRSKASVNTAIKTLSKLGHIKHEHYGDIELTESGRAIGKDIAERHAIFYYFLTKVLNVDEKIADEEACLIEHAMSKDTVHKFKEFLCGYCKKENIFNKDN >gi|343386059|ref|AEM21549.1| OmpR, 1042544..1043230 [Brachyspira intermedia PWS/A] MNKELIYSVEDDDNIRDLIKYTVEEAGYTIECFSNGNDMLEALKKQTPNLVLLDIMLPDIEGTEILKIIRTDYAHLPIKVIMLTAKTSEINIVTGLNLGADDYMPKPFSVLELLARIKANLRKKDVRLDAEELTFGEIKLIVKKRNVFVGERQVVLTQKEFDLLKLLMENANNVVDRETMLEEVWGVDHTMETRTIDMHIKSIRQKLDLTKENIITVRGMGYKLTDVQ >gi|343386060|ref|AEM21550.1| Signal transduction histidine kinase, 1043285..1045018 [Brachyspira intermedia PWS/A] MSSALMFIGILFTVQYNNIVYSQVMIVNIIEMLEKEIDLYDVQTEDAFRKFVLQSDKEELRISIISTNGIVIADTMTDTSKNPMGNHTNRSDVIAALHSIENKPAFSINTSISQKTPYMYVSKKIKADDDRDYILRVSIPIESVNKYLISFLFTAVMVIGIVIVIMALVLPLMSRNIMIPFYMIKETLDNIYNNKSPTPKNLTGYNDINTILYDINELAVSLNENITGYQTEREKLNYVLENIAQGIIAVNKNKEIFFINQYALDLLEISDSNVRKLNEIIKDNDVIEKIDNAIEFSRFSKFDVKEHTMDIEISIIPIRNNENISALIKFEDVTDIRKVEIEKQDFFINASHELKTPLTSIIGYSELLIATGGGKNQADFIKRINNEALRMKDLVIDMLTLSRIEANWKETVDEEIDIKDIVLDVFESNRIKAEQRNIDVQLDIESAVIMANKEKITEVVNNLVDNAIKYTDDDGKVKIYLKKNADKAIFSVKDTGCGIAPQYLNRVFERFFRVKNNKYLKVHGTGLGLTIVKNICNYYNADIHIKSEENVGTEMTVVFNLYKKEESKNIEKIEKNN >gi|343386061|ref|AEM21551.1| CopZ, Copper chaperone, 1045075..1045284 [Brachyspira intermedia PWS/A] MKNVTIKIKGMGCQNCVKAVTEELSALDGVSKVNVSLENACAEVEYDESKVSTDKMLDTIKELEYEPSL >gi|343386062|ref|AEM21552.1| Holliday junction DNA helicase RuvA, 1045284..1045862 [Brachyspira intermedia PWS/A] MFAFIEGKVQIISEGVIALLCNGVGYEIIVSKKLDVKNDDNIRLYTKLIHREDAMILYGFLTREEKNMFTTLMSASGVGPKLAMEVLSTYSINDLMHILFNKDINLLKKVSGMGVKKAEKLLFELRDKIEKIDINISPSVISNDNESDVIKALISLGFSNNEAVKALSAIENKDNMTTEDLISNALRNLSTL >gi|343386063|ref|AEM21553.1| acetyltransferase, 1045967..1046473 [Brachyspira intermedia PWS/A] MDITIKKAGLEDVFDISKLHAICWKDAYKNIIPDSYLKRIYLDDWCDEFEDGINNKTREAHLAYIDGKPIAVISHGKSRCNMEGYGEIISLYVHPIYQGSGIGKLLLEQAVKYMKESGYTNICLCVFEKNEEAKKFYEKNGFKDSGTKNTLKIDDEDIAESVYVYDIN >gi|343386064|ref|AEM21554.1| oxidoreductase domain containing protein, complement(1047023..1048003) [Brachyspira intermedia PWS/A] MKKINIGFIGAGKIAEKMAQTISKIKEAQSYAVSARDIKRSKAFAKKYGFKKFYGSYEEMLKDENVDLVYIATPHSHHYEHIKLCLENNKHVICEKAFTVNVKQAREVLILAKKKKLLLAEAIWTRYMPSRQIINDTIKSGIIGKVTSLTANLGYVINKVPRLIEPELAGGALLDVGVYTINFALMVFGNKIKKIDSSCVKTSKGVDEQNSITLTFEDGKMAILNSTMSALTNREGVINGDKGYMVVKNINNPESITVYSLDRKVIKTIKVPKQISGYEYQIISCINAINNGKLECEEMPHEDILRVMNIMDTLRRSWKIKYPFEK >gi|343386065|ref|AEM21555.1| puttative segregation and condensation protein A, 1048072..1049172 [Brachyspira intermedia PWS/A] MENYILEFLYFYNILYSIMEENINETQQENNNTINTDASAKEETENSKPDYKEFTVSLSSIDYEGPLSILFDMLKRSEKSIYEVSILEIIDQFVEYLKAQAALNLDSTGDFLVVASEFHLYKSKMLLPHDMDDDKFTDKLKFEIVEQMLEFQRYKMVSEELDKLQDTSDTIFERKDTERVKFFKTVNTDDNEVAWKDITLYDLVYAFTKVQFVPETDLAVLSGMSNFHIDNAIDMIRIKLSETAFFPFITLFKDGVTKRQLVTFFLAMLELVKEKEILLKQEMKFREIYVFKRDEKFMPKAEEDKSDDYEESAEESNNNSKEAPNNEEAIAENNGNTENNFSEKNNQNNSNNENSENISNNSDNQN >gi|343386066|ref|AEM21556.1| lipoprotein, 1049195..1051783 [Brachyspira intermedia PWS/A] MCKYKPKDKEELKRLVEDNNIYLGDIDTSLITDMSNLFSKTNRKDYSGIENWNTENVINMEAVFMILKNFNSDINNWNVSKVENMKKMFSGCSKFNQPLDKWDTSKVNDMGGMFLACKEFNQDINSWNVSNVTDMSNMFCLCEKFNQPLDKWNVSKVENMKRIFSGCSKFNQPLDKWDISKVNDMGGMFLACKEFNQNINSWNVSNVRNMKEMFFNCYNFNQPLDKWNVSNVENMICMFAGAYNFNKSLNDWDISNVKYMLSMFNGAGSFNKPLNKWNTAKLENMYSMFYNAIMFNQDLSNWNLDNVSDLAFAFEETPLKKNNKIPIQFIIAEYVTAKNKSSKIEQFEIIKNNVKEAYKSIINYNNKIYTDFRIMLENEFYRELSELKTNNNEVLNFISIEDIENSINYDKKNNQKLNFIDDIIKEKEIKVLTKDKSKIIGIKIIKYIYLEYYNLKKYIYKIQTLDNIINFLDEESFKNCIREIYINSQKDVSVLVCGVYADDNMLIEMYNRENSSLLFMKILALHTDSKFALSLLYNVFARNKKASIKKEAISLLNFIAEKMNLELYELGFKVVYDFGLDKRGEKIIEVNDNKYKISLKNNNAVELFDINNKKELKSIPKYFPENIKEEIKHIRKEIPNILKSQNYNLIKILISGKKYNYKFWKEIFIDNPIMNKYAYSLIWNLYDENMNLKTSFRYLGDGSYTDYDDNNVVMDENCYINLSSVFDLTKEDIAKWKMHLNDYEIFQPINQFPIINIDTSDFNKVIEKLKNIEIVYSSLKAFASRYSMNVIYKFSESIFYFEDFKKDQFIIKIEFQEYVNNGDIVKINISFTNSENKTVENRFIYYWLVLMITDLKKEKLFY >gi|343386067|ref|AEM21557.1| hypothetical protein, 1051801..1052304 [Brachyspira intermedia PWS/A] MYTPKNKIELRSLIENNNIYLGDIDTSLITDMSMLFDKPNFSCFEGSYNEYENYNVRIDFSGIEKWDTSNVVNMRSMFHNIKNFNININDWDVSKVIDMSYMFCGAENFNQPLNKWNVSNVKSMTCMFKNACSFNQDLNAWNINKEADIKDMFFNTKIDSKPVWYIL >gi|343386068|ref|AEM21558.1| UDP-N-acetylmuramate dehydrogenase, 1052369..1053274 [Brachyspira intermedia PWS/A] MIKSFNGVLSKENVSLKKFNTFRVNAKALEFYMPETINGFIDLIKYLNDNNKRYMILGGGSNILFLDKVIEFPIIYMGFFSRIEHTSHNILAYSGAKVSDVVKYAYKNAFTGLEFLSGLPGTIGGAAYMNARCYEHSVSEFIDKVGIIDDNIEYMHINVEDCSYAYKRSIFQDKKYIIVDVRFKLNKGSKKLIKPEMKKFYKDRKNKNQFKYPSAGSTFLNDYETNMIAGKVIDSINMRGTRLGGAMVSPYHANFIVNYNNATGRDILNLMRKVREEVYNQKGITLNAEVRIISNDENEKF >gi|343386069|ref|AEM21559.1| conserved transmembrane protein, complement(1053278..1053961) [Brachyspira intermedia PWS/A] MTSENKHIIISGELALVLVVVMNSFGVVLMLYSGSGISAISSVPYAFSEVIKNISLGTFTYIFQTLLVLVLMILRKKFVWEYLFSFVVGFCFGKFVDIHAAWINHLPLTITNRIIYFIISYFILAFGIALSNRCGLPIIPTDLFPRELSDIIKIPYAKIKITFDVTCLLTTAILTFVFLGHIKGLGIGTVLAAFTMGKSISFIGKLLDKKIEFIPYIKKLLHKENNA >gi|343386070|ref|AEM21560.1| hypothetical protein, 1054296..1054421 [Brachyspira intermedia PWS/A] MGVIIAVLVFKKYKVKITDKSCKYRGWDFLIKLQNIKKNIE >gi|343386071|ref|AEM21561.1| lipoprotein, 1054446..1056833 [Brachyspira intermedia PWS/A] MKYKPQTKEELKKLVEDESIYLGDIDTSLITDMSNLFHESLRKDFKGIEKWDTSNVKDMHNMFTDAVYFNHNIEKWNVSKVENMGAMFLRCLYFNQPLNDWNVSNVKDMGAMFAGAESFNMPLNKWNTCNVFDMRAMFNMALNFNQDLNNWDTSNVENMNGMFSQAKNFNQPLDKWDTSNVKTMQLMFNGCINFNQDLNSWNTSNVENMHGMFYDAKNFNQTLNNWKVNKVVDMSEMFSKSGFQYYDSLDDWNIESLEYLYDWADIIYKNIDKLTLKWILYLYVFDNENKIIINKIEENIKEIHKIASEIKNKKVQFAKRKLENIYYDDLKEVVDYEIFDSIEKYEETIKLNKKDEKKVSYIENCNVLIKDKSRIVDIKVMKYIYLKYLELKRDIYYLLEINSIIGLLDRESFLTFAKNIYIEKHKEASAVVYSLYGGDEALKEIYKKEKDSNLFLIILSSVKTTEYSIKLLYDIYSKTKKSELRENAFNLINKISKEIGLDIDDLELKFSSNFGFDSRGEKIINDNYKLILNANYSVNVFDVKNNKELKTTPKNLEESIKEEIKYIKKEIPNIIKKLSLKLTKSLMHEKKYNYSFFKEVFIDNSIMNKFSSSLIWNLYDKDNLFLTTFRYAGDGSYSNCDDEEVEINDDSFISLASPIEMDYETINKWKHQLEDYELTQTINQLSIIKLDKNNLESEINKLQNIEISYGTFKAFGARYLMTPNYLDYGIVESYNLKNGDCFEIKIDANNEIDYKDKVKINIHFYNENNKEVQDRFIYTLLILMIWDFRLTDMFF >gi|343386072|ref|AEM21562.1| hypothetical protein, complement(1057523..1058053) [Brachyspira intermedia PWS/A] MNDKLLKQILENNKNYEQISSIEDIDNFIDILENTKEVLIEKRRELVRKDVQDNIKFSEDVDKLIKPKNFNFKKENTLLDEIYYDKEGGIIYCDVNDFTIDIRIGHEKGEEYIYIRIYSKNTKLINKLKSIIYLDEELSFLDGNDDHNIWGPVAQNDAEETANRMLTIFNVVKKIK >gi|343386073|ref|AEM21563.1| hypothetical protein, complement(1058066..1059352) [Brachyspira intermedia PWS/A] MKKMHLDIINFLFDKNRELINNKETILNLLLENYENLINSLKEYKLSKPPRINIFKLIDIEELERKNSTILYELLKININNSNVQFNFINSFLKYIFKENIINNTNESFEIEKEYSPKGTQKSIDLYIHNRNFSVIIENKINSGDNGDNQLLNYIKYVKDEISHNNIYVIYLTRDGYLPSENSLPTKERIKLKNKFINISHRNIAEWLKYIIYEDENCNFIHMKEYDNFKSAIVQIIEEEEYLSSSSEEDTFMQDKLKELLQSNEAYNNISTPEEAQEYIDLIESTIEILRHKKTDNMQDYIDYIKKVSDILREDKKYKFEIEDSDTIKDNLFNKNFSHTIYKGSDQIEGLYIILVLKYNHISVGFDTGGIKKRELGNIIEKIKNYKIKWLNRNDNEGIWYDIDINNESTEDTASKMKELYEALKNIK >gi|343386074|ref|AEM21564.1| putative alpha-2-macroglobulin domain protein, complement(1059449..1065175) [Brachyspira intermedia PWS/A] MITGVSMFAAVAIDRTTPIGENTSRANYEAITVTFNQQMVALQAIKEVTNQYFNFNIDVKGTYKWLSINTLAFYPSEPLPDNTKIEVTLKKGIKSELTGDVLENDYTWTFNTLRPIMQKSSPYDRQSELPTDVNIVVYYNMPIYLQSAKEKIQLIASNNNTAIDFDVRYAKIEDLREWETNEYKLEQVLVIKPKKALAKNDEITVHIGEGLAAVNGDLGTANAKSFNFSTHDEFYFKGNSEQTVTASYSPEAPKLEFSTRVEWADLIRNMEITPAIQLPTEEEIQQNSWSSKSFSLYQLRFNPNVTYNIKINGSLKDAYGQTLAQEQNITLNVTDYNPSVSIPSGMGVVESYEGIKLPVQVMNPNTINIQSRYVDKENIIPFLFVNKQVYRYDETPEFRRYTNQYKNLFGYNNTTEYTPNVERNRYITTALYLTNYMNNKQYGLLSIEFKTKTGYQSQYDYSTASQIQITSMGLTGKFSGDSNTIFVTDLKTGMPVEGAEVEIRDDFNRVLARATTDENGIATTKGFRELGIKRASRWDTPRQWAIVTKGDDVSFINSDWGTGVSPWRMDISYDYSPADRDYNGSMFTERGLYKPGEEVHIKGVIRENILGNWKIARDFKTGLYTVNNSRGEEIHKGTVTLNEYGSYLIDFTLPADAPTGYYSVNVEFKSDSNKQSDEEKQEGVKDQTYSLSQSFRVEEFKPLEYESRLWVEDKNYYLGDTMPIKMSGWYLFGEPMISNQVDYNISMNETFFTPPNNAGFRFTKLSWFEDEYYNNYYSMIANGTGALDENGEYAYAPTIDASRSIHAAYVTIESTVSGEDSQRVSTTKSVLVHGSDYYIGIKRQGYFLETDKPAQLEFIAVDPEGNRLEGKKIEVQVIRRHWESVRKAITGGRFEWESKQIDDVVETTTVTTKKDPVAYSFTPTNSGLYIILARAKDSKNREVASDEYMYVIGKDYAPWAMFDDDLLELITEKEEYQPGETAKIMIKSPYESATALVTVEREYVIDSYVTNIEGSTALIEVPIKPEYLPNIYVGVSLVKGRVENEAYTNYATDEGKPSFKIGYAGLSVSPREKELNVKITKSADTLEPRDEMTVDLYVETKESQPMETEIMLSVVDVGVLNLIGYKTPNWFNTFYGQRPLSVASADTRIHLIGQRNYGEKGDTPGGDGMRAANDMMAKAEAMGMDVFSIRKNFLTTAFYQGRVKTDANGKATVTFSLPDNITSFRIMASAINKDGYFGASDDVVVVKKNIMLMPTLPEFAYVEDKFKAGSIVYNYSDQDLEIEVQAVASNAVIENASQKIKVPKGGNADVRFDIIATNRGEAKVTILAKGGEYTDAVEKAFKVNVPMTTESVALFSSTTNNNTDLMLKIPNISEAYKGAGDLEVYMSPSAFSELTGGINYLINYPYLCLEQQLSRVYPIITSKRLLVDMKLTDISEENLDKTVQDFLKMMPTYQSPDGGFSYWPSKTWISPWLTAYAADAMIKAKKEGYTVDENSLKLALEYINNYAKSGNAEKPSFWQDEYINLSSIAYIAAVLSEGGYNANDVKAIIDRIYPQVNNIPFYGQVQLMRAMYYNKYNNKALTEVRQYILNTIKEDPNTAHYELEAYYSNLYWIHSSSVRDTSVALYALIETGYDNAINEKVVRWLVQSRKNGRYLNTQDNVSVFAAMNMYYKKYENVKPNFKAEFIYQGKTLLEETFTARTQPSLTKKYTLDEFMNERLSNSNTRSALANIKRNGDGRLYYGVRLTYAPRELAVNRDMGIKVERRYETKDGRVLDLTKDKFKQGEEYVVVVKVTAPFERHFVVVDTPIAAGMRILNASFATESSEVKNLTGNAGKPTWWWGGFNHTENYNDKILLFADMLSDGEHEYRYVVRAVTPGEYLLPATKAEEMYNPEVFGYDGQHKVVIEAK >gi|343386075|ref|AEM21565.1| ferrochelatase, complement(1065417..1066412) [Brachyspira intermedia PWS/A] MSKKKDTTILLNMGGPRNFDEINTFLVNMFNDYYILNIKNSFIRGMIAKKIVNKIRPDVIKHYEAIGGKSPINEYTEKLINKLNELDSSRDYKYIMNYTPPYSYDVLKELKEKNIDHITLFSMYPQYSEVTVKSSLESVYKAMKKLKYNPKVNIIDRYYDNEYYNDSIVQLIKNTIADKNAEEYILIFSAHSIPKMYADKGDPYEHECNYNIQILKEKLHNAGLNFKDIVLSYQSKIGKIEWLEPSTIDTIKKYNSEKLIIYPLAFTIDNSETIYEIDIEYREEAINKYNIKDFILCPCLNDNINFAQSIIEIQNDAQKQNLNMHYNRKIV >gi|343386076|ref|AEM21566.1| catalase, 1066621..1068003 [Brachyspira intermedia PWS/A] MSDKKLTTEFGAPVENNQHSMTAGARGPMLLQDVWFMEKMAHFDREVIPERRMHAKGSGAYGTFTVTHDITQYTKAKIFSEVGKKTDLFVRFSTVAGERGAADAERDIRGFAIKFYTEEGNWDLVGNNTPVFYFRDPLKFPDLNHAVKRDPKTNMRSAQNKWDFLTSLPEAIHQITIDMSDRGIPYSYRHMHGFSSHAYSFINKEGKRYWVKFHFKTQQGIKNLTDQEAEAIIAKDRESSQKDLFEAIERGDFPRWNMKIQIMTEEQANASKRNPFDLTKTWSQKEYPLIDVGVLELNRNPENYFAEVEQSAFSPSTIVPGIGFSPDRMLQGRLFSYTDTQRYRLGVNYSSIPVNAPKFKPNTYHRDGYMRVESNGSKVEYEPNSQGEWKEQKEYAEPPLKIYGDAYRYDHREDDDDYYTDARALFNLMTDAQKQVLFENTARDMNGVTKEVQLRHIKIV >gi|343386077|ref|AEM21567.1| Diaminopimelate epimerase, 1068244..1069083 [Brachyspira intermedia PWS/A] MTLSFTKMHGIGNDYIYVNCFKEKFTPEDASKYSPILSNRNYSIGADGIILIMPSDKADAKMRMFNADGSESEMCGNGIRCVAKYVYDKGISKNNPLKIETLRGILEANLFIENDEVDKVEINMSSPILEGLKIPTTIDKNPIIDEPITFNGKTYYFTAVSMGNPHAVIFMDNIDDLDINSIGSYIENNSIFPNRTNVEFVEIINRGEVKQRTWERGSGETLACGTGASAVCVAGFISKRTDNIILNHLLGGDLVLRYENNSVFMKGEARYSFEGKVLL >gi|343386078|ref|AEM21568.1| Lytic transglycosylase catalytic, 1069381..1069830 [Brachyspira intermedia PWS/A] MIKDVSNHYSQDFWFIKDVFDVCSNYDVDPLLMVALIKVESSFIPTALSRKNAYGYCQITPIANKDVDPKLNRYDPRDNIVLGVRFIDKILDKFDGDIVKSLRYYNAGNAYNVYGESYAEKIKYEYNTMVSLYVKDDSSYGAIYRKEAF >gi|343386079|ref|AEM21569.1| flagellar basal body rod protein FlgG, complement(1069868..1070662) [Brachyspira intermedia PWS/A] MVRSLWTAASGMNGMQFKTDTIANNLANVNTIGYKKVRADFEDLIYQNLKIQGTPATEDTVTPVGLQTGLGVKSASTQKMFDQGSLQATGNKLDLALEGEGFFQVLMPDGSVSYTRDGSFKIDANGQLVTSNGYRLVPEIVFPENFLVEQISISREGVVSVKIGDENDPVEIGQITLHRFINQPGLLSIGDNLYKETIASGPAFEGEPGANGFPRIHQGFVEMSNVKVVDEMVDMIVAQRAYEMNSKAVQTSDNLLATVVNLKR >gi|343386080|ref|AEM21570.1| hypothetical protein, 1070851..1071249 [Brachyspira intermedia PWS/A] MFKILLFNKKFIFTVSAMILLSMSVFARGYESDDFNFNRRNGFYGRKLPNIQLTSEQMSQIQSIENKYYTQIENFRKDIYNQIQIIRLEMSKETPDISIIDKAIDNKTKSASELQKIRIQCFLEMDKVYKTN >gi|343386081|ref|AEM21571.1| MoxR-like ATPase, complement(1071643..1072686) [Brachyspira intermedia PWS/A] MTDNINNSENTNEISSEIANASKDLQAISEASKMALDVVNAIKNEIKKVIIGQENMLDKLLLGIICDGHVLLEGVPGLAKTLTVKSLASTIDASYKRIQFTPDLLPADIVGTEIYDIKNSVFLPKQGPIFSNIILADEINRSPAKVQSALLEAMGEHQVTIGDKTYRLPDVFLVLATQNPIEQEGTYPLPEAQVDRFMLKVIVKYPTKSEEKTIIKNMSSSKPASLKPITTIETIEKLRKLANQIHIEERLIDYIVNIIDATRNPKDYKLQSEYIEYGASPRAGIYLTKAAKANAMMQGRGFVMPEDIRAVAYEVLRHRISVSYEAQAENINSDMIIESLLANINVP >gi|343386082|ref|AEM21572.1| hypothetical protein, complement(1072722..1073195) [Brachyspira intermedia PWS/A] MIVEEKVSKKSLYLWQNLEYTLTYTGDADKFKPEGINTNAISDFEVLNERVEIETIHKDNEIPTMNYKIIYTMKPLRNGKLKIPELEARYYNVERGNSLVPKEQMINEHNIRVFSSWFLLIMIGQWIVIILIALLIYKFIKDQHKLNKKNFANKQTS >gi|343386083|ref|AEM21573.1| hypothetical protein, complement(1073513..1074259) [Brachyspira intermedia PWS/A] MKKFLFTSILMLILSALAYSFPYKMYTGMTGALRLGGTLYLNNDRIGTSKYTLSSPLMINFGILRNFDIFARVVPITYVPEIGVGVAGQPQFSIMPRFQFFNGFIGAVEVLFPGSDKQKFGLNPQLHYLIGLGDFFTAFFNFELPMYFDDPRGVVESIRLKTAFGVYPGALFGFSLAGIYLEYHFAYDFYNSAVLYLNHLGVGLYLVLNSDASLSLNFTPYLEQLASGFYFGIGASISYTFDFSQFLR >gi|343386084|ref|AEM21574.1| multi antimicrobial extrusion protein MatE, 1074547..1075878 [Brachyspira intermedia PWS/A] MEFIYGYAKNRCKKIFFKYLSASFGSALIAAIYSIVDVAMVGQYEGDNGAAALAVFAPIWNVIYGIGLLFGIGGSVLFSKAKGSGEYDKQNNFFTASFIALSAVIFIVWILSLIFEDNILYFFGADEVLLNLAKRYFLPIKIILPLFAFSQFFAAFLRNDNAPMKATLGVMAGGIFNVFGDYFFVFICDMGIFGAGLATAIGQIITASILISHLFTKKNTLKFQKVNKLFSLSKNIASIGFSTFFIDIAMGILALMFNRQIMKYFGTSALAVYSVIININILVQSSAYTIGQAAQPIISTNLGAGKMDRIKSAVKCSIFSALVLSIVYTLFTYFNTDFLMKAFMKPSEEALSISKNIMRTYFISFLILPFNVYATYYFQAIMKPSSSFIIAVLRGLIISGILIFIMPLIFVKDSIWYVMPITEVITFIIAMVFFIKYRTIYSK >gi|343386085|ref|AEM21575.1| DP-dependent 7-alpha-hydroxysteroid dehydrogenase, 1075940..1076749 [Brachyspira intermedia PWS/A] MVMKLLDKKIALVTSSTRGIGLACSKKLAENGAKVYLAVRRLDAGKEVANEIIKNGGDADVVYFDATKEETFTSMIEDVIKKENRIDILVNNFGTTDTSKDFDLVNGDTEAFFKIVNENLKSVYLPSKAAVKQMIKTGGGSIINISSVGGIFPDMSRLAYGISKSAINFLTKNIAVQYARNNIRCNAVLPGFVATDGAMESMSEEFLKSFLKNVPLNRPADVEDIANAVLFFASDNSSFITGETMPVAGGFGLPSPMYSQYMDMGGKKG >gi|343386086|ref|AEM21576.1| hypothetical protein, 1077080..1077241 [Brachyspira intermedia PWS/A] MYFNVRISSKIFYGIILVGIAFMVYVFVFSPKGFLTLDAKKVIIETKKRKLKN >gi|343386087|ref|AEM21577.1| hypothetical protein, 1077403..1077570 [Brachyspira intermedia PWS/A] MLASSNIKENDNYINIRGALILASMIAICFITYLLLINKNLLPKLKKKKIITSRG >gi|343386088|ref|AEM21578.1| hypothetical protein, complement(1077709..1078311) [Brachyspira intermedia PWS/A] MSTKIILILFIISNTFFGAFYFSDIAKEYGTNENNNAVKKTVTETNEQLKTEYNIDTNSVGSFFSMEGTNIINQNGVVSSPVILEDTYKSNPFRYTEVTFILTAFFSYTYATYITFGLSSIENANVVASTTGRSRYKSLWISSLLFEITAGLFCGAAVAYDSYQRVYGNKKNDGFSFRFMPFYEPVNQDAGFVFSLNHPL >gi|343386089|ref|AEM21579.1| curli production assembly/transport component CsgG, complement(1078311..1079780) [Brachyspira intermedia PWS/A] MFIRKIVFLILIFPSILLSQQIKKEIGETYEKENIAVFEIQGTSSGYGEDVGTKMTALIENSLTRMNRFNIVDRKNLDKYLKEMELQLTGITEKQVIEVGKIYGYSKAVTGKIVSANVAVEHNDDGSFSLYSTVDMVLQIVDVETTKILYSSKLQGSAYYSTSTYPSYSLRENLIDNACNNLAYKVENKMKSIFKITLTIADVDGGNVILLAGKNHGVSSKTRFKVYSKKEDIILPSGNVISGGYNYKGTLRVKELNNEYLIAKISRGNNILPGDIARETVIGDFGLGIFLNYASYNIQATEKIYQSSYNPNAGKIKISLNKNEYALGLHLKMGYNGVLFSPNLSIGILFGDFLKSSYAVDTRFNFDININLYQEVLRFVISPYIGMGISFTTIGEVIGGNYYTDNYSYLKSGSKIDSRDIMFGIGAIASLQYNVTDTIGLNLGVGYRFYTNPINLGVFSDGHEVSLPEKIKTVNLTGLEFTFGAFFIL >gi|343386090|ref|AEM21580.1| hypothetical protein, 1079932..1080366 [Brachyspira intermedia PWS/A] MSENSIKYSSAGNLVSLTMNKSYNITSFNIDESLLAKDQKELLEEMISSSINEAVSKVNELRKKLEEEDSDNEREQAKPQPNLFNMNFKDMNQMFNDISKMTSVEYKDGKINISLDSITPDMISKMNDMMNNMNNKNDDDNKKE >gi|343386091|ref|AEM21581.1| recombination protein RecR, 1080372..1080977 [Brachyspira intermedia PWS/A] MNNIQSLDKLTQIISRLPGIGTRTAMRLALYLFDCDDEYLKEFSEVLSSLHENIKLCNICYSLSDNDICDICSNDKREHNKICIVESYPDMLAIEKTEEYNGVYHILGGLISPLRGIGISDIRIRELIERVNKNNIEEIMIAFSASLEADTTASYIYKTLKENNFNGRVTRITYGISLASDIENADSRSLARSILDRVEMN >gi|343386092|ref|AEM21582.1| carbohydrate kinase, pfkB family, 1081042..1081989 [Brachyspira intermedia PWS/A] MKNYIVSIGGSNIDIQGFSKSRILLKESNPGKIKVCTGGVERNIINNLSNIGLKNIKFITSIGNDIFGDILFNNIKSLGVDVSYIVRNGSSTSYIAIMNNDRDMEIAMSDMDTLDENINIEYLDSIRDIIENAEFITMDAVMNRYIFEYIIKNFPNKKLLTDAVSIKKSEHIKGLEKHIYALKLNSNEASFLLDRDINTIEEGKEAVKIFLEKGVKEIYITFGALGICYGTYNDINEAYYLKAPKVNIVNATGAGDAFMAGIVYSIFHDYDLDYKVKFAAVMAMFALESEETVNDNTNFDKVTKRIEDIFGIKIN >gi|343386093|ref|AEM21583.1| indigoidine synthase A family protein, 1082007..1082933 [Brachyspira intermedia PWS/A] MNNLEEFLDISEEVKEALHEKKAVVALESTIISHGMPYPENVESALNSEKNIRENNAVPATIAIIKGRIKVGLNREELEYMGSNKNIAKSSRRDLPVMLALKKDGATTVTTTMIGASLAGIKVFATGGIGGVHRYAQETFDISADLQELSKTNVAVVCAGAKSILDIGLTIEYLETFGIPVLGYKTENFPAFYTRESGYKVDYKIDTTKDIANILNTKWKLGLNGGVLVCNPIPEEYEMDKNYINKIIDETVKEARDKNISGKDVTPYILAKLHSVTENKSLKANKELVYNNCRVAANIAYDYSNLIR >gi|343386094|ref|AEM21584.1| Dipeptidyl aminopeptidase/acylaminoacyl-peptidase, 1082949..1084964 [Brachyspira intermedia PWS/A] MDLCMENLNIKDFLKFNFLSNIELSKDNKNLLFVKSNQDYENNNYVSDAFIYNIEKNKIYKLTSVKDASLVSWLDNDTVIFKSSLRDEELKIKKYEEFIDYSLLYSININGGEAESLFNIELEVIDLYSIDENNFLIKAVYDINRDKKRKEDNYLEWAKEEIDYEVFDEIPFWINNVGVTNKKRDRLYHYNKKENKLTAITDEYSNVNSFKYKDGKVLCIINSFKDKAPTTSELRLYDINDINNIKEKIIIDSNKYAIYFADFIIDDDNKEKIISVMTDMKKYGLNENSSFYLIDESNNINLVYHYDNGLGNMIGTDCSFGGGKDIRVYKNQIYFVGTENENAHIKCLDLKGNIKNITNKQGAVNYFDVSNDDYIYFIAFRDLKLEEIYCINKEIEKQLTHFNEDILKEKSLSIPEKVLFKTPNNFEIDGWVLKPINYDENKKYPAILDIHGGPKTAYGEIFFNEMQVWANMGYFVFFCNPRGSEGKGNAFADIRGIYGTIDYEDIMKFTDIVLAKYTNIDKSRVGVTGGSYGGFMVNWIIGHTDRFKCAASQRSISNWIDDFGTTDIGYYFNPDELGGDVCSGFDKLWEQSPLKYANNAKTPTLFIHSEEDYRCYQSQAFQMFTALKYYGVESRICLFKGENHELSRSGKPKHRLRRLKEITDWFEKYLK >gi|343386095|ref|AEM21585.1| CTP synthetase, 1085068..1086684 [Brachyspira intermedia PWS/A] MNTKYIFVTGGVVSGLGKGITASSLGRLLKARGLSVTIQKFDPYINLDPGTMSPFQHGEVFVTDDGAETDLDIGHYERFIDENLNKFSNVTTGKIYQHVINMEREGKYLGETVQVIPHITNEIKRRIYRENDTKRTDIVITEIGGTIGDIESLPYIEAIRQIKTELGQDNVLYIHVTLIPFISSSEEIKTKPTQHSVKELMQSGIIPDILVCRTSKHLQDSHKSKIALFCNLPKENVFENFDEPNIYNVPIMLESQGLSDVVCKHFKLQTAKIDLTEWTELIIRQKNISITNERVRIAIVGKYISMKDAYISLIEALNHGGIYNDINVDIEWISAEELENKDNISEYFKDIQGLIIPGGFGERGVEGKIQAIKYARENNIPYLGICLGMQLMSVEFARNVLKLEDANTIEVKENAKNPIITLMEEQKKSILKGGTMRLGAFACDIKDGSLANKLYGKTEISERHRHRYEFNNEYIDVMEKAGFVVTGRMKNADLVEIVELKDHPFMIGVQFHPELKSRITNPHPLFVGFVEAAKKLKA >gi|343386096|ref|AEM21586.1| cupin domain containing protein, 1086803..1087135 [Brachyspira intermedia PWS/A] MGNYINNIDYKKVVALKDLVTIKDISMLSLVDRKSLAMNIISADKSKEISTHTSTGDVLVTVIEGKAEIIVDGTSYETSSGESILIPANVPHSLKAIEAFKILVIQVKSE >gi|343386097|ref|AEM21587.1| transmembrane protein, 1087441..1087902 [Brachyspira intermedia PWS/A] MLLIEVILVIFALAFDSMFFKNKKASDNASSSSSDDIKQENSSTSEVIAANKFSVLNIAVIFFAFLGIIFVILKLFKAVAWSWVWVLSPLWLSTALVLVILLIFIIVFIASTLNKKDKTKEEDNSTEQSSSEKTENIEKIENTNNTDKTDKTE >gi|343386098|ref|AEM21588.1| putative Na+/Ca+ exchange protein, 1087934..1088941 [Brachyspira intermedia PWS/A] MENMLLNVVFTVAGILLLYLGGTYIVDGSVMVANRLKIPSIVIGLTVVAMGTSMPELFVSLFGALRGESAIAVGNVIGSNIFNVVFVLGVSALFMTMSAGKKSYYVSMISMFIMYAALGIMLLNFSTKRLSGDKISIIEGVILIVLLCIYVYYLYSVISKDKDELAVFEKEVSSSTKTNSIARAIFKIIVAVLALAFGSDIFIKGVTGIFRNFLSEHIIGFIVVAVGTSIPELVTSVIAAIKKEADISIGNIVGSNIFNVGGVLGISSMASFKFGGIVLSEAQDYLMDFSIMVFVGLLLLAFTVKGKSLGKVKGCFFLIIYIAYVVYLLKTTSVS >gi|343386099|ref|AEM21589.1| nitrate ABC transporter, ATP-binding protein, complement(1088942..1089628) [Brachyspira intermedia PWS/A] MTDKINDYIFRLENINLSYNDLIIFKNFNIDFHLDRINIILGASGSGKTSLLNIISSKINKDDKAFVYQEPRLLDFLTSYKNIEYVLKDKIKNKNEMDKKIKNALEITGLINNINSKPNELSGGMRQRLSLARALAYDSNFIFMDEPLQGQDIKRKKELIDIIKNIKSKTNKTIFYVTHDVYEAVMLGDYVYILSNKNNFTQLIFQTYIDNNDIENHQAKLTDILINN >gi|343386100|ref|AEM21590.1| putative ABC transporter, permease protein, complement(1089618..1090346) [Brachyspira intermedia PWS/A] MKNKKLICLILGIIIFISLWYFTALKINSEIVFPNIPNILKKFAEILSEKSFYKDLSSSLIRVLITFALSFLLAFIIGISAGIFTPIRYILIPIINFIRTIPTIPLILVAIIWFDNNTVPIFVSMLIIFPIMYDSITNGIINVDEKLIEMSISYNVSLKTQIINLYIPYIKAYIFTGISQSMGITWKSILAAEILALPSSGIGTKLYESHLYLDSVSLFAYCLIAIIFNGIFEIIIRINHDR >gi|343386101|ref|AEM21591.1| hypothetical protein, complement(1090447..1090716) [Brachyspira intermedia PWS/A] MFISSCATTSQSINVSTSTLNGKTFQLTNMFEGRGITISFYNEEFYGYSGFNTYLGKYEMRRGNMIIFTDMVVTKMGGASEAVEEEKNI >gi|343386102|ref|AEM21592.1| Heat shock protein, complement(1090791..1091195) [Brachyspira intermedia PWS/A] MKYIVHVLIAALFIFSCSTAKVAHIEEPKNNSLFGRRFKLVSLYPDMNITIEFTPDTIHGFSAVNNYSSSYTVDGDIFNILSISMTKKSGASDKIAAEIEYLNMLQNATSYTINGKQLIIYTLLSNENLVFEEF >gi|343386103|ref|AEM21593.1| periplasmic solute binding protein, 1091379..1092239 [Brachyspira intermedia PWS/A] MKNILTIIFILSILIGCSNVSKDNKDVSNNKLKVYASIYPMYDFAKKICGDKADVYNMTSAGSEPHDFEITSKDMANLTKANLFIYNGGGMEHWVDTVKDSIKELKYVETSSNIDDKGLDPHFWLSPIKAKKQMENIKNTLSEIDAVNADYYNSNYNYYADRLDELDNHFKDVLSNIKNTNLVVTHPAFGHFCEEYSLNQVAIARDEADPKAMSDTIAFIKDNDVKAIFYEDFSSSKLVDSIAKETGVRILTLNPIESLSEEYINAGEDYFSVMEDNLVSLTNGLN >gi|343386104|ref|AEM21594.1| ZnuC, ABC-type Mn/Zn transport system, ATPase component, 1092249..1092989 [Brachyspira intermedia PWS/A] MSKIIEFKNVHFGYTSEDILKCISFDVNKGDFVSIIGSNGAGKSTILKLILGEISQFRGSIKLYEEDINKFKDWKRIGYLEQNAYSKIMNFPATVYEIVMSNNFADIGLFKFPNKTHRMKVINALELLGMEKYKNRMISKLSGGQIQRVFLARTLISEPDLLVLDEPTNGVDRETIDLIYKILQDLNKEKKVTIIMVTHDVEKMSNISNRVFCFEEGSLVELEKKQIYDELSHKHKHPNSDSVCSC >gi|343386105|ref|AEM21595.1| ABC-3 protein, complement(1093329..1094165) [Brachyspira intermedia PWS/A] MIIWENPMEIFEYDFMRKAFLVGIMLAVIIPCIGVVVVLKRLSMIGDAISHTSLAGVTFGLVFNINPIVASIIFCILSALSIEFIRKKIAKYGEMSISIIMSLSIGVAGLLSGFVANNSNFNSFLFGSIVAISDFELKLVILISSISILIFIFLYKEIFYITFNERLAKLSGVPVNRINFIFTILTAVTVSISARAVGALIVSSMMVVPVACSMQVANSYKKTIIFAVIFNLFFTILGIFISYYQGLKPGATIVLISIITFIIIILLKSVLSSRHNAA >gi|343386106|ref|AEM21596.1| DegT/DnrJ/EryC1/StrS aminotransferase family protein, complement(1094180..1095232) [Brachyspira intermedia PWS/A] MIRHSRPTIRKKDLESALRVMISDNLATGDVIQEFERNFASYFGKGFTAIFVNSGTAALELILRHLKVGEGDEVIMSSFLNASPLQVVTSLKATPVLIDIDEDSFQISMDNVIEAINEKTKAIIVSHMFGNCALIDELADIKVPIIEDASHSLGGKYRDTLLGSFGDFAYFSLSATRMITSGGAGGMILTKKKGMDAIRDIIHYDKKENFIRRFNYCATDLQASIGIEELKHLERMVEVRGDIASFYDNAILESNLMKLSTHDSESPSYYRYVCMLNGSMNIYDAIKMFERHNVEAARPIFKPLHQYLNLPNENYPNTENAYLKSISLPIYPTLQKNEAELICKLIKQIR >gi|343386107|ref|AEM21597.1| hypothetical protein, 1095394..1096602 [Brachyspira intermedia PWS/A] MNSFINKNYVKIILLYLIIFSFILNIILSFNIIPIRSTYDDFQHFYDMYTWYKKGEIPITSTRFELSDTYEDEFKTARVPGGAYYIYYTLCYKLSNENLYIAKIINYFFSLLLISIFIFWLYKRLGFFVCSLMSPLILLNGYVVKAMTNFWNPNIALIFSFIFFIFLYEYIYTSGEVNKKGIISSIFIFPILAIIAQGHFASFFSVIPSMIFYLIIKYKSTVKYLKYWILGVFLSFLEYLPYLISELNNGFYNTKLMLSKSSDSEGIVIAKIQSLFLFPTNEMSSHYLSGFKNIIEFWTLTPNYIYGLIFLILSLMFSFYCLINMINSIFKNKYNNTKEKSILEISKFFILSVFVTLLCFMVFTFGEGYFHYFYGLFAICYIPIILFLVQKENFVMNNKKYF >gi|343386108|ref|AEM21598.1| ABC transporter substrate binding protein, 1096929..1097801 [Brachyspira intermedia PWS/A] MMTKKIGILQLVEHSALDQANKGFVDGLKEAGYEDGKNITIDYQNAQGEQANCVTISQKFINDKVDLILAIATPAAQAVANLTKDIPILITAVTDPADSKLVADNKMPGGNVTGTSDLTPVKEQMELLKKLVPSAKNIGFLYSSSEQNSKFQIDIAKAKADELGLSYVDATVTTPNDLQQVVQSLVGKVDVIYVPTDNMVSAGMANVIGVTGPANIPVICGEAAMLNAGGLATYGIDYYELGKLTANQAVKILKGEAKPADMPIEYIQNPVLEINTNAARKLNITIPADL >gi|343386109|ref|AEM21599.1| tRNA pseudouridine synthase A, 1097873..1098625 [Brachyspira intermedia PWS/A] MNNIKITIQYDGTDFYGWQIQPNLRTVQGEIYKAVQKVYGEKITIYGCGRTDAGVHALGQVANFRVPKMLVPIHKVHIALNSYLDRDLRIIKAEEMPDSFNARASATFREYLYIVHNSSTSFPFYERYSWFYRKNVIDEKLINEYAKYLIGEHNFTSFCSTEDENDSKFRYLERVKAIRKGDTIYFIIRGNAFLHNMVRIIVGTLVEGQKKKMPINFIEDILKSEDRARAFVTAPAHGLYFRRAFFKDEF >gi|343386110|ref|AEM21600.1| 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family, 1098980..1099468 [Brachyspira intermedia PWS/A] MVSDIDGVMTDGRLIFDDNGVESKFFHTQDGMGVVLALKAGIKIAVISGSNSNAIKTRFDKFRKHGFEDLILGEENKMPVILTLMEKYGLKKEEIAYIGDDLIDLSVMRYVGISFSPKDAHYEALKVADVIISKRGGYGAVRVVIDMILRSKGIYNEIISKF >gi|343386111|ref|AEM21601.1| hypothetical protein, 1099446..1100009 [Brachyspira intermedia PWS/A] MKLLVSFNILFLLLCVSCTNFNDIGKEFKQSDDFVPPPDMEFYGFRRESYDTNFKQLDSFATNAKFYNKKKIVELYESRTYTYDSNNTIAASVSGEFITVNQETLFTQVYTNVIVKSSNNTTLYTEYLQWDNKKQQFKSPVPIRVEQEDGSWLTGSSMEGDMGLEHITIYNETDEGDAIGVPVAEDQ >gi|343386112|ref|AEM21602.1| hypothetical protein, 1100134..1101333 [Brachyspira intermedia PWS/A] MEDSSAVITSHVMTFYQETELATFSGGVKLLSKTNGSTISGGYASYNGKTRYAYVKNKPVLRSPTNNMTIRSSFMERDFNTPIAKAISNVHLTHVDTESKRKTDGYADNLIYDMDKETAYLTGNPRLYQGSDRLEGEILEYNAKTATANVMGRGKIYVLQTNNYINSSETNKKKDNVSNYNIVVADRLFLNEYGGKDNNTRTLYAYGNVTAYFYEENMILKGGYIEYEIDNEHIYMYQDPSVRMPDRGIIAFGEWIEYKKDEKFKDVIFHNDVVMIDYDESLSLEGDLLHLDPDTKVATVSGSPKAYVEDRSIKITSVTMQMFNDEEKLRANGNVYVEGKDMNSKSAWATYFDKQKYLRLWGESPYLKQKESVVRAREIKYYIETEKVEAMGVSGEIPE >gi|343386113|ref|AEM21603.1| hypothetical protein, 1101350..1102285 [Brachyspira intermedia PWS/A] MIFFVSCQKSNEPLNKDKIYNVNITYIEDDNILGFTPGDFLDIFDDDLSKLTYDILGYKIKYNLKNGVDVNKFYSDNRKVIIENSDIFKRDFIDIKNIDYDQLEKDILYSLSNETSANIKKLFGYEYGTPLKLIAKNIAPSYEQSILNVWNSPVNGRNELLDAKRLFIFTSLYWRIVANEFRDTSIVIINMPLTSNYRGMSAKSIADGGFVDRIVCENNNINPCKSISIISTYQFLTSGLDNKELKDIFAYYIVQTIAMMFAKYDIHSDEKHSIMSEVDRFDYVNWYSNIINFQLKPPYKTIKYYKDTIKN >gi|343386114|ref|AEM21604.1| conserved hypothetical protein, 1102544..1103347 [Brachyspira intermedia PWS/A] MMKKIFINILLLASFSAAYGFDEGFIWALKANFNGTATMPSISDSDLKKLGATYMKGGVGYTMDGEAELGYLFGSERWFGGMDPSKFSGMSLFGSLGVGNGFAGQVSGNGIADMYINVSYAPVISFGVGTKAYFLNSRLSLGLLLGGKIIADLSPEYLAYSSDSTILAPEIGEIIVSDFMIKNMNPVMFSIKFMIEYNQPINDRVEVILGAYTRFNVYAPGYITMPDSLYKLMETVKDPNFTLETPLKSYYINSLDFGITLGLAFKG >gi|343386115|ref|AEM21605.1| hypothetical protein, 1103382..1106198 [Brachyspira intermedia PWS/A] MKKTHLLFLLIISIFMMSCGGHFFNPRYYYNKSASDSEQGEIPDTTPETPPEEVPENEDPFKNGDWNDPTYGGYDASKFKTWLFKASFQKDKLPIYTFFEDDTRYWISGVMDWNNIPANYYDGKDGENYAGSIIGNVSITGLKVYQYVANNPLYSKEGYLEGRLDRFNFYSINGKASVATLRQYLIAVDTYSKFIFAFGAITGTQNVAGDEVPISFEAIEKHGDKRPFFEYDPIGYVKEDGSVVLYEHYRKEFVAAPTEYMPKIHTEFEKMAEHKENGQGSSPYLKVDVSTIDPSTVLNNFKDKQYGIRDKLVLYTYTFDSTANTVTLTAEHFYDGDMGTETYTFSKVAGLTSAEYTNSSGKAIIINGIEDYNKLKDGSREYILNYNDPGPDFIYRVAGKIFVNNDENRTYEFSADGMSFKYTEGSKTITYYFSKQSDPSESKAAYSQTGSVFWGIKLSDYNGIKDGQISGAITEVGMINPDMAMTGTLASYVAYIDQSSIPSEFVETVKGKTYFYRNYQEPNSGNGNSLNAYKYVFNNDATELTYTEMVYKQEDVSTTYKLDNVNGLQATYTSNGKTLVIKLGINPNMIYNGEGSALADCTATDKGPFFLDIVRGSEYIAEDKSYSYKFSDDGKLLTFTYSSGESINYDYTQTGTEYFKAAYKQQDTWFPRYWALRVTSLGGVLEMSTGSLAFPTDILRDASYGWKAVLGSGSLVKDPFLNAVAGRVFEVRNGTDSTKLERYTFSSGGASIVYEQIDWYTDQPIEGSRVEYYGYEKSSDTKGIYKYNDSLNNTITKIEFSVDSMSPTKLFKSSGQVGEYNYQDPGPYIYDVIKGKTYKRSSGATYVVDNTGKSIQYYENGIDKGLTTTYTFNKVNNVNHLEAAYYDPKAWGFLGAGYWAVEIMEEYKDKNLYVSTGALKTPDHAINSGDYGDPYIKE >gi|343386116|ref|AEM21606.1| hypothetical protein, 1106321..1106719 [Brachyspira intermedia PWS/A] MNKMRKKIILLLISLFLLSLIFISCSSPYGSSSGVKFKSRKGIYQNETGKIAVTINEQENNNLRVIDLGSSAIDETLTVNSESAANYMTVKSVKYEGYVYTMNFGNSVNTIFFTISDNKNNNVVFNEKLSKQ >gi|343386117|ref|AEM21607.1| preprotein translocase, SecA subunit, complement(1106867..1109809) [Brachyspira intermedia PWS/A] MGAMDLVFKLIFGSKEQNDAKILKPIAEKTLTFEEEIKKLSNEELTNKTKEFRERVEKYIGCKTEELDLSKEENKKKLQNILDDILPEAFAVVREASIRTTGMRHFDVQVMGGAVLHQGRIAEMKTGEGKTLVATLAVYLNALTGLGVHVVTVNDYLAKRDAEWMTPIYSMLGISVGILDNTRPHSPERRAVYNCDVVYGTNNEFGFDYLRDNMVTRKEDKVQRKFYFAIVDEVDSILIDEARTPLIISGPAEKNIKMYYEIDRIIPMLKQAEVDERMREVAGTGDYVLDEKDKNVYLTEEGVHKVEKLLNVENLYGAQSSTIVHHVNQALKAHKVFKKDVDYMVTDGEVLIVDEFTGRVLEGRRYSDGLHQAIEAKEKVAIQNESQTYATITFQNYFRMYPKLSGMTGTAETEAEEFYKIYKLDVAVIPTNKPIARQDLSDRIYRTRKAKFEALAKYIKELQDAGKPALVGTVSVEMNEELSKVFKRHKINHEVLNAKNHSREAAIIAQAGEPGAVTLATNMAGRGTDIVLGGNPVAKGVAEIEQILVLMRDKAFKERDPYKKEELTKKVKSIDLYKEAFVRSVISGKIEEAKELAQKNNADEMIEKIDRIIQINEKSKIDKEKVLAAGGLHVIGSERHEARRIDNQLRGRSGRQGDPGLSVFFLSLEDDLMRLFGGERVSKMMLAMGMGEEEELGHKWLNKSIENAQRKVEGRNFDIRKHLLEYDDVMNQQRMAVYGERDYILYSDDISPRVEEIISEVTEETIKDISDNKKHVDPLEVTKWLNSYLIGIDEDAANKAVEGGVDNAVKNLTNLLLEAYKKKSLEVDEKIFREVEKNIFLSIIDNRWKDHLFAMDSLREGIGLRGYAEKNPLTEYKLEGYKMFVATMNVIHNELVNLIMRVRIIPNSFDRMERESAFDGGVEEKSSTSAMNGGNAQAIQSKVKTAQANVKMTQKIGRNDPCPCGSGKKYKHCHGKDNPQ >gi|343386118|ref|AEM21608.1| putative permease BitE, complement(1109982..1111631) [Brachyspira intermedia PWS/A] MNKRLKIDFWTYITLIIAVIFALFLVYPLFSLFISSFKDPETGAWTLDNFLRFFSRKYYYQALVNSFSVTICVTILAIIIGTPMAYFMSVYKIKGKTFLEILIIISMMSPAFIGAYSWILLLGRSGVVTKFFAGFGISTPTIYGFGGILLVFTLKLYPFIFMYVSGALSKIDVSLMEAAESLGCSPFKKVVTIAMPLITPTILAGSLLVFMNALADFGTPMLIGEGYRTMPTMIYSEFVSEVGGNANFSASMASIMVFITAMMFMAQKYFVNKKSFTMSSMNPIKPKEIKGVMSVLVHVFIYFIVFLSIIPQLTVIYTSFLKTNRAIFVKGFSLNSYISIFSSLGTSIKNTYLYGIITIFIIVILGMFIAYISIRRKNILTSIIDTITMFPYIIPGSVLGITLLLAFNKPPIILSGTSMIIIMSLVIRRMPYTLRSSSAILYQISTSMEEASISLGASQVKTFFKITAMMMLPGVISGAILSWITVINELSSSVILYTGKSRTMAVSIYQEVIRASYGTAAALSTILTLSTIISLLIFFKLTGKKEVSL >gi|343386119|ref|AEM21609.1| putative ABC transporter BitD, complement(1111624..1112748) [Brachyspira intermedia PWS/A] MSVSISIENVVKRYEKLTIIPDLSLEIKNGEFFTLLGPSGCGKTTLLRMIAGFNTIEGGEIKFDKDVINNIPAHKRNIGMVFQNYAIFPHMTVRENVEYGLKLRKENKESMKKKVDEMLHVVKIEEYQDRLPERLSGGQQQRVALARAIVITPSVLLMDEPLSNLDAKLRIEMRSAIKDIQRHVGITTVYVTHDQEEALAVSDRIAVMKNGVIQQVGSPVSIYTRPYNVFVATFIGHSNLFYATIKIEGNDTYLLFRCGYKLKMDNLLDVKDGDEVIVGIRPEEFFVNSENEEGIKAKILSKTFLGKYTNYFLHFNDNEVVPDQPSIEYSQDSSYTDRMYEKDEVIILKPNANKINVFTPDMEKSLIKGVKKYE >gi|343386120|ref|AEM21610.1| periplasmic-iron-binding protein BitC, complement(1112832..1113851) [Brachyspira intermedia PWS/A] MKKIILICSALFLSLFLFYSCSSSESGAQGGNSLVIYCPHPLEFINPLVDDFKAKNPGITVDIIAAGTGELLKRVESEKDNPLGDILWGGTISMAKPKIDLFESYTSTNEANIAEIYKNTEGALTRCTAVPSILMVNTNLAGNIKIEGYEDLLNPELKGKIAFADPSASSSSFEHLVNMLYAMGKGDPEKGWDYVQKLCANLDGKLLSGSSAVYKGVADGEYTVGLTFEEGGANYVSAGSPVKLVYMKEGVIIKPDGIYIIKNAKNLENAKKFVDYATSYDAQKTITDKLNRRSVRSDLPPSAILQSVDTINVITDDEAVVDKNKQNWLNKFKDIFTSI >gi|343386121|ref|AEM21611.1| periplasmic-iron-binding protein BitB, complement(1113934..1114962) [Brachyspira intermedia PWS/A] MKKIILICSAVILSLVLFYSCSSSESGTQSGQGGNSLVIYCPHPLEFINPLVDDFKAKNPGINVDIIAAGVGELLKRVESEKDNPLGDILWGGSLNTVKPKVELFENYTTTNEASIADAYKNVEGAITRFTAIPSVIMVNTNLAGNIKIEGYEDLLNPALKGKIAFADPSASSSSFEHLVNMLYAMGKGDPEKGWDYVQKLCANLDGKLLSGSSAVYKGVADGEYTVGLTFEEGGANYVSAGSPVKLVYMKEGVIIKPDGIYIIKNAKNLENAKKFVDYATSYEAQKTINDKLNRRSVRSDLPPSAILQSVDTINVITDDEAVVDQNKQNWLNKFKDIFTSI >gi|343386122|ref|AEM21612.1| periplasmic-iron-binding protein BitB, complement(1114998..1115972) [Brachyspira intermedia PWS/A] MFFCSCSSKESNTQNANSLIIYCPHPLEFINPLVDDFKSKNPGINVDIIAAGTGELIKRVESEKNNPLGDILWGGSLNLIRNKIELFENYTSTNEPNIGDAYKNTEGPLTRFTTMPSVIMINTNLIGNIKIEGYQDLLNPLLKGKIAFADPSASSSSFEHLVNMLYAMGKGDPEKGWDYVQKLCANLDGKLLSGSSAVYKGVADGEYTVGLTFEEGGANYVSAGSPVKLVYMKEGVVFKADPICIIKNAKNLENAKKFVDYATSYDAQKTINDKLNRRSVRNDLPPSAILQSIDTINVIKDDDTVVDKNKQNWLNKFKDIFTSI >gi|343386123|ref|AEM21613.1| transmembrane protein, 1116315..1117172 [Brachyspira intermedia PWS/A] MLNILLVIIGSIAYGFLPIFVKNIIAYNYSSLSIVFYRYFLTAIFLFIIIIVSKKSFKITKRQFIELLIFSIIGLGLTFFFLSQSLLYISAGLSNMIHFGYPVIVLLVMIFMFKEKANILKVLSIVFAIVGIVMLTQVVEVESFLGVVYALITTITYGSYIIANKKCSFAEVDTMVSLFYMSLFVSITFFIVGMFTGSLQLLNNLYVFGNFAIISLVCTIFSLGLLLYGVKRLGSSLASILNMFEPATTVVASIFIYKEELTINIIIGSILIILSTISMVIGSKK >gi|343386124|ref|AEM21614.1| ferrous iron transport protein B, 1117319..1119808 [Brachyspira intermedia PWS/A] MKLTELDIEEGFVVDKVATDGEIRQRIIEMGFTPGAKGWVVRKAPLGDPIQVHIMDYEISLRKSEANGIEVAKSNVEIKKERVLKHIEHKEVKDEDDTLIESKSDIAKKIKVPSNNTKFKIALAGNPNSGKTTIFNALTGANYKVANYPGVTVEKRQANMLYNGYTYDLIDLPGVYSLSAYSQDEVVACDVLLNEKPDFIINVIDSTNLERNLYLTLQLVELGIPIVCVLNMYEHAEKNGIKIDEKNLSELFKFPVMKVHGNKYESVVRILDEIEKMHTSGNKLHRDSAIRYGEEVENSIKNIVDTMHGDISEIHKRWLAIKTLEKDERAIHSIRRECNNGGEVIEVLNKEIIKLETSMNAKTDSIMADKRYSYIRGALQEAVHKDNIQAFNFTEAADVIFLNKWLGLPIFLVVLWLIFKVTFTVGAYPQGWLEAGIGALSSFVGSLLPEGSLIQSVVVDGVIGGVGAVLSFLPLVLILFTGISFLEDCGYMARAAFLMDKIMHKLGLHGQSFIPLFLGFGCTIPAVMAARTLRSKKDRVVTILITTFMSCGARLPVYILFIGAFFAPKMAASVMFSIYMIGVLMAFIMAFIFRKAFFKGEETPFVMELPPYRIPRAKAVLRHMFDRGWMYIKKAGTYVFAASVIIWALMTFPQYKPTDEDNARLMQEAKSLAVSQGLDANDEEVITAEYDRLVASEGLKNSYAGKIGTFIEPVLKPLGFDWRIGIGLVAGGAAKEVLVSTIAQIKSIEDGDETVLTESLQNDPVFNPVVAYTLLLFVLLYFPCFASVGVIGAEIGNKWIPFLMIYTLTVAWVVSFAFYQIAGRIAGII >gi|343386125|ref|AEM21615.1| hypothetical protein, 1119983..1121491 [Brachyspira intermedia PWS/A] MRNTLFIILLLIFNLIFLNTCGSYFSPRYYYQQMGKADSGDDNTEEPDIGGEDILKPEEDPFYNYNGERPWNEPNYNGFTLDLDNEYVIAASFGLKNEPTYMLIKDDTWKLKDPLRNEYYYDGTNTKAAGFNVSKVKYYMYKNMNPTFSSTSAYNKSERLQRFWFYRFTGSAGLDTDNYLIAIDSYSKLVFAFAIPVKWKTIVGIPAPVEWGSVELGWEASADSATLNEQVKFAVDGFTYFYEYDPVGIVHSDGTIEIYPWCTLSIANDNSYAPRVEGGKVDLTRKIATYGTPGRSPYMPIKIVEKNKMALQVQNLEIENISAKTLNTKFGGKTEYYDYAGFSYDIRLAGSLNTEEPVFNTISSKEKPSLFFDSLTTVNIGERKSILSTVYTADIQYEDKDEVYFSLDASITMYDKTYKIPQIVNDTILIEHQKPMIKFKYDKTQDMFVFDSSIGDTANISYDKSFTLKKGEIKEFVITIKNAAIGADETSGEIKLIYTLYY >gi|343386126|ref|AEM21616.1| putative DNA repair protein RadC, 1121640..1122341 [Brachyspira intermedia PWS/A] MYNDFYNDNIKFSNALESSNADIANEKQILASIISNGISLEKANTIVEKLYYNFYNLHNIVNASEEELSKVKGLNSKKINLIKSIPSILEYYLLSSLKVASPHIKKKDLINYLIIKLGKLKFETFSIICLDVNKRFISMEHIFRGTIDSATIYPRDLVEKSLSLGASYVIISHNHPSGISKPSKEDIEITKVLYKAFLMVEIKMIDHIIVAGNSFYSFREDGMFDKYKHNAEV >gi|343386127|ref|AEM21617.1| putative transcriptional regulator, 1122344..1122763 [Brachyspira intermedia PWS/A] MLTTNLKKPFYNNILSDNKEEDNTNKDRLREDDELISSVGKNIRAIRKSQTKTISEIAEMSGISAKYLQSVEVGKRNISIINLNKIANALNVPIAILFSYDHIEKTKKLLYIANKLKNYSALQLSNIDTIIKDLKNIID >gi|343386128|ref|AEM21618.1| hypothetical protein, complement(1122844..1124817) [Brachyspira intermedia PWS/A] MKKFISIIAAFILMIAVISCGGGNKKANQSEQNTQTNQKSQNNNAQNTQTNTSQTNNQKEFFDMKYVYKGVRVDKAKFDEELKNLRENNEKAKRNFDFLNRKFANDDERKKYSIEFISNVNFNYYPFSETFSSVDIYNEDLTDYYADEHLYVDQNLALKKAREELLKLNKKDADVYLALFLSHFACDSLYYFEEEKKYLTEWKKAGGTNISMIIAKYDGDNAYSNKMKLVDYIIEAPDSLRAEKLVADAYNNGFSRYIAKNNGYIDLFNENNYSLSSIEFGGTAHIALVNIVPEIVNTNIINKYLKTYVRNRLSNDKLYFDDAEYFRNYYRIDLLEYYNGWNRLSFLQFKKNTFLIESTRNGPVNIHYYNPEFMNDHIYASFEEVKTYNFRLGDIDKVESAEINSISTNDLKDYTKGSKFISFGKFDEKKYLEYIDETMGWRIYFPSFFLCDINNDGKEELMLSGDYDYGGGRGGTVNFTLLLKENLEVDFDSEIGQLINNKDFQNLERIQKIYTEDGKNKMFLLDKSYNKALDIFIDNNEIKNTDYFDYITYSYQPKLEWKGSILDGVPEGALKTDASFDMSKAENASDKAIVSDRTLRMADKLISDAYFAKKATLDKQGQEELLEQRRAEIKTIQEAKGDIKTIEAEMLKILNIQ >gi|343386129|ref|AEM21619.1| hypothetical protein, complement(1124951..1126936) [Brachyspira intermedia PWS/A] MKNVISIIAAFILMIAVISCGGNKKTNQSEQNTQTNQKSQNNNAQNIQTNTSANQSKQTNNQKEFFDMKYVYKGIRADKAKFDEKLKKLRENNEYAKRNFDFLNRKFSNDDEIKKYSIEFISNVNYATLDLEFLISWGSWGIYSEVEDYYAVGYLYVDQNLALKKAREELLKLNKKDADVYLALFLSHFVTDSLYYFEEEKKYLTEWKKAGGTNISMIMRENDNENTYIQKMNLINYIIEAPDSLRAEKLVADAYKDNFYRYIVKDNGYIDLFNENNYSLTSIELEGTARLSSVKIAEEIGNTNVMNKYIKTYINNRLANDDIQDYLEYYQNYYNINAVYCYDGWNNLNLLEFKKNTFLIESTMKGLVNMHYYNPDFIKDNLYASFKEIKNYNFRLGDIDKVESAEINSISTNDLKDYTKDSKFIDSGSFDIEQYSSHVASNMYYPLHEVSFFLCDINNDGKEELMLSGEYTSSAGRGGIAHYTLLLKDNLEVDFDSEIGQFINYRSFQDLGCTQKIYTENGKNKMILLDTLNNEAYDIFIDNNEIKNAEVFDYITYSYQPKLEWKGSILNGVPEGALKTDASFDMSKAENGSDKAIVSDRTLRVADKLISDAYFAKRATLDKQGQEELLDQRRAEIKAIQEAKGDIKAIEAEMLKILNIQ >gi|343386130|ref|AEM21620.1| ankyrin repeat-containing protein, complement(1127070..1128743) [Brachyspira intermedia PWS/A] MKSLLSLISIFVLIVSIISCGGGNKETEQTENSQTNQTETNKVYVNPTTTNENHNTDIDINIDTTKYTNEYIQGTEMDPIPTGYKKIDEILNEHKYKAPIYEISKLIAEEGLEGKITEYTNFGDKYIYQDSTPLFLAVQFGYNDLAKELIKEGADVNARASGMETETEGGLDMLYYAVRNNNPEMTKILIDKGLDKNRDYGYEYSTYLTDIAIDNNNLDVLKLLVKRGDSKETLIPKAVEQNNIEMVKYLLSIGQDIDAQIFYDGFWVNSPLKVAAENGYIEMAKFLIDEGANLNSADDYMLYAYNNYDITKLLVDNDVFNLNTNTTREQAIKLVQDGKYYEIEKLLSSEDSNNIDGYDELMNAISKGDMKALEKLIKDDTDLNKQYDKITPLGLAAARNDKEMVKFLVEKGADINLEDGYGYTPLIKAMKYRNIDLAKNIVDLKPDLNAICSATGDTPLTYLAREVWFGTDLCYYMIKNGADVNKKNDNGDTPLIVAVQNVVGSYGMLGVIINMGADYNIKNKEGKTAMDIVMEEDDKATLYHLNNPDDLETYLSY >gi|343386131|ref|AEM21621.1| hypothetical protein, complement(1128880..1130808) [Brachyspira intermedia PWS/A] MKNIISTIIMLSLIITIISCGGGNKEVNQASQNTNEQKTASSDNQKTETKKEFFDMKYVHKGVRVDKAKFDEELKKLRENNEYAKRNFDFLNRKFANDDERKKYSIEFISNVNYDPFSETFSTWDKYNEDLTDYYADEHLYVDQNLALKKAREELLKLNKKDADVYLALFLSHFACDSLYYFEEEKKYLVEWKKAGGTNISMMIAKYDDDNAYSNKMKLVDYIIEAPDSLRAEKLVADAYNNGFSRYIAKNTGYIDLFNENNYSLSSIELEGTAKVASLNIVPEIVNTNIINKYLKTYVTNKLSDDKLYFDDAEYFRNYYDHNNEDAYDGWNGLSFLEFKKNTFLIESKVNMHYYNPEFMNDHIYASFEEVKNYNFRLGDIDEVESAEINSISTNDLKDYAKGSKFISFGKFDEEKYLEYIDETMGWRVYPSFFLCDINNDGKEELMLSGDYDYSGGRGGTVNFTLLLKENLEIDFDSEIGQLINNQDFQDLNKSQKIYTEDGKNKMFLLNEASSEALDIFIDNNEIKNADYFDYITYSYQPKLEWKGSILDGVPEGALKTDASFDMSKAENASDKAIVSDRTLRMADKLISDAYFAKKATLDKQGQEELLEQRRAEIKTIQEAKGDIKTIEAEMLKILNIQ >gi|343386132|ref|AEM21622.1| putative inversin protein alternative isoform, complement(1130936..1132642) [Brachyspira intermedia PWS/A] MKNFISIITVFILMIAIISCGGGNKGTNQSEQNTQTNQTQTNEQVYINPTTTNNNRDIDINVNENNDINKTKYTNEYIQGTELDPMPTGYSKIDEILNEYKYKAPIYEISKLLAEEGLEGKITEYTNFSDKYIYKVNKDSTPLFLAVQFGYNDLAKELIKEGADVNARANDMETEDGIDMLYYAVENNNVEMSKILIDEGLDAGRDYGFEYPYYLTDIAIDNNNLDMLKILVESGDIDLESSLIPDAIEENNIEIVKYLISIGQDVNAQIFADGLWINSPMKVAAENGNIEIAKLLIDEGANLNSSDDYIGPAIDYGNYDITKLLIDNDVFNLNTNTTREQAITLAKDQKYYEMEKLLLSEDSNNIDGYDELMNAVSKGDMKALEKLIKDDTDLNKQYDKITPLNLAAARNDKEMVKFLVEKGADINLEDGYGYTPLIIAIKYRNIGLAKNIIDLKPDLNAICSATGDTPLTYLVNANKYGGVADLCYYMIKNGADINKKNKEGNTPLMIAAASYNYSIVGVLVNMGADYNIKNKEGKTAIDIASARDDTSALHNMTNPSDLEHYLSY >gi|343386133|ref|AEM21623.1| potassium/proton antiporter, 1133123..1134718 [Brachyspira intermedia PWS/A] MNSAILLSSIIIILCIIVSKISVKVGVPSLLLFLVLGMVFGTDGILKIEFDDYKVAEELATITLIFIMFYGGFGTNWKAAKPVANQAFLLSFVGTFITSMITGLLCHYILKLNFFESFLIGSVVGSTDAASVFSILRSRSLNLKDGLASLLELESGSNDPMSYMLTVIFLGLIGKTLTSPLSIAYMVFAQIVFALAVAAAVSFMAYNMLKRFTFPVNGLDTIFVLAVALLSYSLSSFIGGNGYLTVYVVGIVLGNTKIKNKVTLVHFFDGITGLMQMVLFFMLGLLSIPSRILNVAPTSIYVALFVTLAARPIAVFSILTPFKISLKKQLLVMAAGLRGAASIVFAIFVIVNDNSISYDIFHVVFFLSIISVLLQGTFLPIIAKKLDLVDSDENVLKTFNDYVDDSDMELIQVKIPSTHHWVGRPIMEIELPEESIIVTIERGDSTIIPHGKTVIEQGDVVILNAKKTKYYDISLREIHINHRHPWKDKELKDLNLPQNNLIVMIKRGESTVIPRGNTVIKDKDIVLIRDI >gi|343386134|ref|AEM21624.1| putative GGDEF domain protein, complement(1134875..1135702) [Brachyspira intermedia PWS/A] MNDVIKVINILNDIPEPFSVDGIIKTFEASSKDFIKSFAVYFYKEEIGEARLWYTSKNKLVISDKTNNKEYTLFARGNKFGYIIINTDKNEDKIQILINYLSIILYSEKLSFLANRDKLTGLYNRGYIIKYLQEKEITNEIYSIVIVDLDKFKHYNDTYGHNIGDHVLKLVSKVMKDSLKKLIHKSVLARYGGEEFIIVFDIDNKKELLNAMEEIRTSIIETDLSTEEYSLKATASLGGAIKEENTTLRTFINKADQSLYNAKETGRNKSVILDF >gi|343386135|ref|AEM21625.1| putative metalloendopeptidase-like membrane protein, complement(1135807..1137051) [Brachyspira intermedia PWS/A] MKNNKFKYTKIRNNDNILSYIEDILFKIKSKLSKSNSIQRIRTTYVHSTRYTSNDKKNNIFLSIIKKFALAVVSLSLFMILANFLIINMRHTSNAAILPEDKMPSNAAYSKILDEISPEQVSYNTSSISEVPTVTSAVTLENATDIFYNSITSDNTLVGDGTIGMKYDEYIIEEGDNLTTISRKIGANLDTLVSVNKITNANRLRPGQKIVVPNRNGLLYTIKKDESIEEIAERYDVSLNRVLAFNKISDPSNIEVGDDIFLPGAKYTLDERIDKFGQMFSIPTTITRISSVFGYRIHPITGVRTKHMGVDIPGRLNTPVYAARKGKVIFAGYSGGYGNLVIVRHDKGYTTYYGHLNSITTKAGATVGVGVMIGRMGSTGRSTGSHLHFEVRRNGVALNPADFIPIKKYLRGRR >gi|343386136|ref|AEM21626.1| HAD-superfamily hydrolase, subfamily IA, variant 1, complement(1137151..1137813) [Brachyspira intermedia PWS/A] MIKNIIFDLDGTLADSILDIYNSVNASLKHFSLQAISIEDTHKFVGNGARLLIKRAVNKYSNNEEIEEEIYSFYIKYYEEHCVDNTKAYEGVYETLDTLYNHNINMFVISNKPNKMAIKTVEKLNIQKYFKAVIGDGVYPYRKPDVNIWNSLKKDYNLIEDETVMIGDGIPDYEFACNSSIKCLLALYGITDKNILLELKNNYYLNSFNEIADYIIKKKF >gi|343386137|ref|AEM21627.1| N-formylmethionyl-tRNA deformylase, complement(1137820..1138383) [Brachyspira intermedia PWS/A] MLRELVIYGDERLQKVSEKIEKIDDEILTLIDDMFETMYKERGVGLAAVQIGVLKRLIVISVPDFDDETKPDFKLALINPEIIWHNDETESLEEGCLSFPEIRDDVARYTQIKVKYLDRDGNEQILDAENYIAKVLQHEIDHTNGISFIDRLESYQKRRLKRELKELRNNTVRGIKKANNREMLKNS >gi|343386138|ref|AEM21628.1| putative phosphoserine phosphatase SerB, 1138579..1139238 [Brachyspira intermedia PWS/A] MMRVAYFDLDKTILNKDSIFPFMMFYLKKNPSSIMHYIALIPYFLLFCLKIIDNQKIKYQIAHIFKNIDIEFGDKIGKEFADTIVPSLYYKDALEEIKKLKNQGYTLILVTASFEIYAKYIAENLGFDRCMGTELWTFRGKYTGYMYGKNCYGAAKRYRLFTEHFFPHHSDKNIAYSDSISDLPLFNFADTKVCVNPDNKLKEHALKNKDKGFTIVNWR >gi|343386139|ref|AEM21629.1| TPR domain-containing protein, 1139240..1140325 [Brachyspira intermedia PWS/A] MAENINNVYDNAAAIDEDIKDIIKENNDIIAEKINNLIDINNISYAKKLALELIKKDNKYKYGYLVLIDIYYEENDFKSVIELIDNALNFIKDDKDLLENKIEALISTYEYEEAKNVIEKLISFGNADSSVYGQYGILLSIEGKHNEAIEKYKKAISIDNEDVLSMINMSVAYRALYKYDDALNILDRALTINKNDSNIINRINNIKYLIDNSKFDAGRLTAIQANPDRFNLLVPENFDASIEGSLLKIESSDKRISIIISYSDKKYDEAAIKELFDGFRSRRGELYSIITPISIRQREEYNDLFAEYIFISKINKNDFFNAITVVGKGEESIILTMSATVTVSSHLISFAKEVMNSLYFK >gi|343386140|ref|AEM21630.1| flagellar basal body rod protein FlgB, 1140450..1140878 [Brachyspira intermedia PWS/A] MSMFADTTYAKTMTVAKKLLNVYGLRAEVIADNIANVSTPNFKRSDVTFEYQLARALDSENYNGMEAKRTDSRHFPFHMPMDYKQVSPTITVDYDTSYRNDKNNVDIDKEMAEEAKNTLRYQMFTQIVNAQYREIRRMIGNA >gi|343386141|ref|AEM21631.1| flagellar basal body rod protein FlgC, 1140914..1141375 [Brachyspira intermedia PWS/A] MGIFSIINTSGSGLTAQRTRLDVIADNIANVNTTRTTEGGAFRRSRVIFKPRDDGNKYRSPFLPDALQPNVGTGVRVFSIEKDMETATRFVYDPSHPDAIKYGEKAGYVEMPNVNPVTEMVDMMEASRAYEANSTMIQSAKTMFGSALNIIRY >gi|343386142|ref|AEM21632.1| putative flagellar hook-basal body protein FliE, 1141408..1141779 [Brachyspira intermedia PWS/A] MNINSVMNAYSMNNTRTGNVGDNYGFVLKTTDPRHYGPAQQLRRSSNNDLISNFGTMLSDAIDAVNQKQVDRDNIIVQAGIRPDQVDVSDVMNAIAEAELSLSFTKAVIDRAVRAYQEVTTYR >gi|343386143|ref|AEM21633.1| hypothetical protein, 1141807..1142586 [Brachyspira intermedia PWS/A] MNNNKLFSFKKELLRASVYGVIAIAFANLIFFSIYNNNQIYITIILIILEIITLVFLYIDASNINKRKLLFIKNNSVLEHNINKKVSKENIIDRLRYFGYSMYSINSSRVFINAEVIKNKKSIIIHAYYFFLVDIDKDGEAVLNNIKNELNEIFDLYVDDNQKLFKKDDNDKDKIVKAKLYNHAVFIFYGDNIPSRIIDMSEYGYTKEKLLNSNAQIFSVSYLPSDNKLYFADAIENVINLNKFPKNDFVYIIKDIFSL >gi|343386144|ref|AEM21634.1| nitrogen regulatory protein PII, complement(1142603..1142950) [Brachyspira intermedia PWS/A] MNIKKVKIEIYIPEEYTQKLREALNNIGALGVGNYDNVMSVTKITGYWRPLENANPFDGKVNEISEAPEDKVEFSTDVKNIENIIKIMKEVHPYEEPVINIIPLLNDRFDVNLNY >gi|343386145|ref|AEM21635.1| mechanosensitive ion channel, 1143158..1144198 [Brachyspira intermedia PWS/A] MQYLKETIFWNNSLLQYLIAVGVLIISIISMRLALLFLLKILLKLNTRFQSPFVIDLTKSIKKRTKPIIFIASLAIARIGLTLPKEESSYFGKIVVVFIIVFVTLFICDIITNFTNNYLSKKKDVVISDGIITILKALVWIIGFLTILSNLGVNVNTFITGLGVGGVAVAFAAQSIIADLFNYFVIVFDKPFLKGDLIQVDMDKGVVEYIGIKSTRIRRNTGEQLLISNTNLLASRIQNYRILEKRRQYMLLGVEYSTPLEKLKVIPNIIQTIIESTSNTEFYSARFIEFADSSLNFEVIYHITIPDYAEFVKIVEDINYKIIDEFNKLGVGFAFPSRTLYISKDS >gi|343386146|ref|AEM21636.1| aldo/keto reductase, 1144208..1145065 [Brachyspira intermedia PWS/A] MDYTLLKSDNRIPNFGIGTWGLGENEDKKEKEIRSIVFALNNGVRLIDTAEMYGNGMAEILIYEALKHTDIKREELFIISKVYPHNAGRGKIFDSLKASLKRLGLDYLDMYLLHWRGRVPLKETVECMEEAKKEGLIRDWGVSNFDIDDMKELESLKYGDKCVLNQVLYHLDSRGVEFDLDPYMKDRNIALMAYSPLGRAGELGRNIFKNSTILQIAEKYNASAAQIVLAFISKVSGYIPIPKSASRKHLSENIESCNIILTDEDVYMINKEFPKPYKKMPLDIV >gi|343386147|ref|AEM21637.1| putative methyltransferase FkbM family, complement(1146220..1147002) [Brachyspira intermedia PWS/A] MLNKELINKIVWWIPKRELRNNIRNILLSYIYISKINNNKKNLEKFNDVLDFGKNLYESKLKIEKQTNINFQSEIEQDFISYLIFSGKKKGFFIDIGANDGIKISNTYFFEKLGWSGICVEANPIIYEQLEKNRNCDLYNAAILDKKMDSVKLVNYEGHSLMAKIDISESKENSLNIKSMTFDELMYNYKNISSIDLLSIDVEGFELNILKTIDFNKYDIKLIIVENNEKEGVLEQYMKSKGYRLLIDIYRSHDLAFVKD >gi|343386148|ref|AEM21638.1| glycosyl transferase, family 8, complement(1147038..1147319) [Brachyspira intermedia PWS/A] MNICLSSDNNYAPYMGTAIASILKNSLEDEKIIFHLIDGGITKENKDKILSLKNIKECEINFYTPDIKMYDEWFEKIPSKVHFSAAMFYRISI >gi|343386149|ref|AEM21639.1| putative nucleotide-diphospho-sugar transferase, complement(1147331..1148272) [Brachyspira intermedia PWS/A] MFDTPILLVIFKRKDTALKVLEAIRKIKPKKLYIAADGWRNEEEKIKCIDTRESILKSIDWECEIKTLFQDTNLGCCNGVSKAITWFFDNEEQGIILEDDVLPEISFFYYCEKLLNYYKDNEQIMHIAGDSPLDRKVGEASYYFATIQHCWGWASWSRAWKYYDATMKTISFKDTKKTLKKRYNDFNIRDYWQNWFYRTADINTWDYQWTYCIISKDGICINPNVNLISNIGFGEDSTHTGNPDDENANRKTYPIDAEHLIHPKEIKCDANADFEIAIKRFNIKPFSLSYNITREIKRIIRQIKGLFIKKDNK >gi|343386150|ref|AEM21640.1| glycosyl transferase family 8, complement(1148515..1149426) [Brachyspira intermedia PWS/A] MKKKIALLLCSTGNEAFAVGNVIIGAKKYLFQNLKDEEYDIIFYTNKLEPNDEKALKTIFPRIIIKIYESPFSKKMIELRELNNFSVFAYARFEAFNILDNYQKVFYTDTDIVIQKDISHLINLDFELYATLSDISIRNSAQTKETIPILEKTKYNIDCNSFYDGNIIISDKIKDYKNIAEWCYKKTEEYITNDLVILNLACQEFNIQLLDAKETFCCFPKSENADKSHIIHAIGPDKFWRGTYNKFWEENNKIWIESGGSQTYKENNAKRKKIDKIVWWIPTFKLRDKVRRYLLRKSGLTGR >gi|343386151|ref|AEM21641.1| galactose-1-phosphate uridylyltransferase, 1149722..1150696 [Brachyspira intermedia PWS/A] MAELRYNPLLGDYVMIASHRQSRPQMPKDYCPFCPGSGKVPDSYEVLCYDNDFPALSFEPPYPDEVDNGKLFRTAPSIGKCEVILYSPDHNTTLPELPVDHIAKLVALWQERMKVISENKKIKYIMPFENKGEVVGVTMPHPHGQIYGYSWIPLRIKRKIEMASSYYSVNGRNLFLDMIEQEVEYNKRVIFENDHFICFLPFASEYPYGIMIMPKKQTNSITDFNKEESLSLADALKKATSTLDLLFDMKFPYMMCMYSAPVNDGFNYSDIWNYHIEFFPPMRSKEKQKFNASSETGAWAPCNPTSPEEMAAQLRTAYIRYMGM >gi|343386152|ref|AEM21642.1| hypothetical protein, 1150700..1151632 [Brachyspira intermedia PWS/A] MLKFTIIIPHRVGENIEKTLEGVYLSNYPKENIEIFQAEGTHPTVQRNECIKQSAGDIVYFIDNDSIVSADNIKEASTIFESDEKIAIVGGPAIHKVSSLIEMYIDKCMRAYYAVGPIANRYRFDNNDVKEGSDRDVILCNLFVRRNVLFEAGLFNEDLYPNEENALIDKILSLGYKLIYNPRIIVQRPPRSNLKAYIKMLLNYGRGRFEQLFRDFNIKNLIFILPSLFANYILLSPIVLCVYHFSKLNVLKYYFLPLLVYIIMTFLLVLYILFVIKVLYQKFGEYLYILLCFLLLIFSMDLDFFTESLE >gi|343386153|ref|AEM21643.1| hypothetical protein, 1151766..1152251 [Brachyspira intermedia PWS/A] MYIYKYVLFVLFIFSFDLYCFTGVNITDSFYSKSYIDDGVTDINDIVFEDYSINLNTIGFPMLSNFFILKDKFPILSIFYNLYDFIGYDKSIKTYIMHLDFFRTFKTIEWNCLDINKNISFSFSYSSSMNVNYNSIIRDLSASCSRFCMDTNILLGIHFFL >gi|343386154|ref|AEM21644.1| cytidylate kinase, 1152392..1153063 [Brachyspira intermedia PWS/A] MSSTYEIITLDGPSGAGKSTIAKLLAKKLSFKYLDTGAMYRAVTLYMIKHHIDINNNSEVISALNNLSINFDNAGRIYLDDEDVTEAIRSMEVVNLVSKVSSISIVRQNMVSLQRKIAEGGNYVVDGRDIGSVVFPDSKYKFYMDASLDERAKRRYNEELSKGKNITYEEVRESIRKRDEFDSNREDSPLVVPENANIIDTTSMTIDEVVEKIANVIFNIKSN >gi|343386155|ref|AEM21645.1| 30S ribosomal protein S1, 1153086..1154792 [Brachyspira intermedia PWS/A] MKVQEGEGTMEDNKNLSNDEIEFRKALEESDNTFLSRGKIVKGKVVQFDDTDVFIDFDSKSEGKIKRSEFDKEPTIGEEIEAIVSGEDDKGYVILSKSEIDKRKSQELIDNAVKNNTAITGVVKEVVRSDSKVAGFKVSIMGHQAFCPFSQIDLAKGIKESDYIGKEFEFRVIKKNGRDVVVSRRVLLEETQNAGIETFLNNLQENDIINGKVKNIEKFGAFVEITPGFDGFLAIPNMSWDKVINPKSIISKGEERMFKVLHIDKENRKVDLGIKQLDEDPWGKFVEQYHIDDVIQGEVTNVKKFGAFVKVADGIEGLVHVSDLSWNSHVNNPNDFVKKGAFLECKILDMNAAERKLTLGLKQVKENPWDTVEKDFPVKSAVKCKVKRIIKNFAVFELPNGLEGICDISDFDWRNNIVNMKDYVKEGEEVNMVIMSIDRDKQRIKLSYKHTKDSPWRLFEKAHPQGSIVDGTVKAIVDSGAIISLEDDLEGYMHVSQVEIPKGSTLEEVLKVGETYPFVVREVNQSKRRISLSRREYMEAQNKKETQNYISKAEPTSLTYNPFDNINN >gi|343386156|ref|AEM21646.1| putative monogalactosyldiacylglycerol (MGDG) synthase, 1154971..1156104 [Brachyspira intermedia PWS/A] MKKILIISSEYTGHGHKSVHTSLLQGFKALYPEEIECKVVNGFTLGGPDLMAAERLYNSCIKYAPQLWYKIFKFSFKNRDIINKNNAFHVKRKFLKLIKEYKPDIIVNVHPMFSGSLLSILKKKNINIKFFIIITDLITISKLWFDNRADKVISPSYEASEYMMQNGVDKEKIITFGLPVREGFNALYKTKEEVIKNTNINGTLRILLLNNSERTKRLMYIIDGLYERYKCEVTVVCGRNEKTFNKLSKEYSSKEHKPIIMGYTQELPRLFHENDILITRSGPTAIIEAINCLIPIVSMGALPGQEEENPIYIDKNGLGYDTSSTDDIFNKIDLLVANNRENLVKMREKQFDYYGRDVREKIVKYIADELYKDSENK >gi|343386157|ref|AEM21647.1| hypothetical protein, 1156186..1156638 [Brachyspira intermedia PWS/A] MKELISDINLSNIELKNYYSIFERENSENEKYWVISNETDCTLCRTSFVGKNLTDFEWGNNEIYISNSLNVKEVLNLALKMFMSLKNILEENYSYQIFDLILTLSDGSNEAPPNANIRFYAVRDDFRIVDLENIEDNKSEAILIETVNQN >gi|343386158|ref|AEM21648.1| Fer2 BFD, BFD-like [2Fe-2S] binding domain protein, 1156868..1157044 [Brachyspira intermedia PWS/A] MADKTICFCMAVTENQIRDAIKSKKLKTVEEVSNATKAGTGCGGCQVAIKQILDEMNK >gi|343386159|ref|AEM21649.1| NifU N, NifU-like N terminal domain protein, 1157134..1157967 [Brachyspira intermedia PWS/A] MWEYTDKVKDHFINPRNVGEIENPDAEAMTGSIVCGDALKLTLKINKDTEVIEDAKFQTFGCASAIASSSILTEMIKGKTLDEASKITNRDIALELGGLPEEKMHCSVMGMETLEKAINNYRGIVTEDDEHDEGAIICKCFGITDTKIKRAIRENNLKTVDEVTFYTKAGGGCGACKVKIEDILNEELAEMEREAKNAPMTTVQKIKKIEEALEKVINPMLKMDGGSCRLVDVDGNKVMIEFKGACSACASSKNTLKGFVEPKLQELVSKDLEVVGV >gi|343386160|ref|AEM21650.1| NifS, Cysteine sulfinate desulfinase/cysteine desulfurase-like enzyme, 1157985..1159151 [Brachyspira intermedia PWS/A] MEEKKIIYMDNNATTRVYPEVLEAMLPYFKDQYFNPSSMYTPAGAVHKEMEKAREQVADFLGCEPIEVCFVSCGSEGDNMAIRGTIEAYPTKNHIITTKVEHPAVIETCKSLERHGYRVTYLSVDNDGNINIDELKNAINENTAIVSIMYANNETGVIYPIREIGQIVKNAGAVFHVDAVQAAGKLPLNMKDEPYIDMLTIAGHKIHAPKGIGALYIKNGTKLRTVQTGGHQERGRRAGTENVPYIIGLGKAASMVKAELPRFMEHTAKLRDTLEAEVLKRITDVKINGKGANRVSNTANISFKNIEGEAILLLLDGYGICTSSGSACSSGTLEPSPVLQAMGVPFEYAHSSTRFSLSLDNTMEEIMYAADAIEKIVKRLRDISPYRN >gi|343386161|ref|AEM21651.1| AbgB, Metal-dependent amidase/aminoacylase/carboxypeptidase, 1159341..1160489 [Brachyspira intermedia PWS/A] MDYKKLNDIIVSMRRDLHQIPEVGTELPQTKNYVINKLKELGLSYKESSLDSGLVCDIGSGDNVVAIRADMDALPIQEETGCEYASKNGNMHACGHDAHTACLLGAAHYLKENESRLKGKVRLVFQAAEELAVGAHNMLNSGLLEGVKAIVGTHIGTLSADTPSGEFILKEGPLMASNDRVFIKVIGKGAHGAYPHLSIDPMLTASQIVQGIYNIKSREILATDPVIISICMLHGGTQYNVIPTEVNIEGTFRTFSEENRAFITERIKEVAESIAAANRAKAEVVIKRRGAPVVNNAKIYEQLNEVCNELGFKKASHYSLSMAGEDFADYLEKIDGAFILFSTMTEKNIPHHNSKFEIDESKLYQPPVLMSEWAIKYLENNK >gi|343386162|ref|AEM21652.1| uncharacterized Fe-S protein PflX, of pyruvate formate lyase activating protein, 1160871..1161851 [Brachyspira intermedia PWS/A] MGYTVNYNEKHLKNIDEALVKAELLYDKCICCGHICNVNRNKNKIGRCKIFEDTNHIKTASHTLHFGEEPMLVGEGGSGTVFFSSCNLSCVFCQNHQISSDGVGEIIDIETLADYFLDLEKQGAENINLVSATHVIYPVLKSLKIAFEKGLNLPIVYNTNGYDTKELLDCLYGIVDIYLPDLKYVFDDKAFKYSRAENYFNTAINAIEIMKEQVGDLIVNEKGIAEKGIIIRHLILPNNESDSYDVLIELKERGFLNTTISLMSQYNPKFKACNFESINRKLYKKEYDDLVDYALDLGFENLLVQEMESSDNYNPDFTKEKPFEMQ >gi|343386163|ref|AEM21653.1| hypothetical protein, 1161976..1162170 [Brachyspira intermedia PWS/A] MNEIFALLESEEVEKRLEALEELAKNVENSDKITVIKALKPHILDWDENVRLKVAQVLKLYTGQ >gi|343386164|ref|AEM21654.1| putative septum formation inhibitor-activating ATPase, 1162173..1162973 [Brachyspira intermedia PWS/A] MGRIISFSSGKGGAGKTLCSVNFSAELASRGYKVLVFDIDINCSNVFILLHVKPQSKLQEYFEGTLTLKDCVIKSEYGIDVISAGVNIQRFVQFENDFNLSNLAKDLKVLSQEYDYVIIDYAAGITQPMMRFYEMSDDIILVANPEITALTDLYRLMKMIYVNNMTDKMYLIVNKVKNIDWAINLYREVKKVTSKFSLDINLVLLGPVLFDEEKVMISVQKRTPIIILYPKTPIKGGFSLAVTRYLYDIGVMKDENAREKTFSDFF >gi|343386165|ref|AEM21655.1| hypothetical protein, 1163247..1163504 [Brachyspira intermedia PWS/A] MFYNDYEHFINKIVWFIPSKKHRDNFRKILYDIVNSMYKLEYIADKLNVKDDKKGMVIVESTGGLADQFGKYILGESIKKIMMFE >gi|343386166|ref|AEM21656.1| putative alpha-1,2-fucosyltransferase, 1163654..1164241 [Brachyspira intermedia PWS/A] MVKEYFDYDINHILATKKDIYIDCYPKILDINIDDLVKDIDLDKYHFKVLAGENLSLYNELKNNFSISVHARLGDSHIMPEFKSIFNSDYNEYASYFIKSINFLNNKFKDYNPKFVFFSDDMNWVNDNVISKLDKNILYRINIEKNPPHLDIYLISSAKHQIISLGGFGNLASLFNKNKDKIIIRPNDFQSLKNS >gi|343386167|ref|AEM21657.1| putative cytidylate kinase, 1164372..1165004 [Brachyspira intermedia PWS/A] MRYMLMSKNIVITISREFGSGGRYIGEMVAKDLNIPFYDKAIIEMASDKTGFSPEYIKENEQKLTGASLFNFAITGSYAGNMVFGNGESLQDTMFFAQSNVIKEVASKHSCVIVGRCANHILEGMENCINIFIYSDMENKIKRAVEEYKLDSANIEKILKERDKLRAKHYNYYTGKNWGDARNYHACLNSDFIGIDNTIELIENIAKSKL >gi|343386168|ref|AEM21658.1| putative hydrolase, 1165018..1165719 [Brachyspira intermedia PWS/A] MSIIADLHTHTLVSEHAYSTVDEMVNSAKEKGFLALAITDHGPKSSDGAKSVHFKAMHSLPNYINGVRLLRGCEANILDYSGKVDLSESILEYLDFVIASYHEDSIQPLTKKDHTNGYVGIIKNPNIDCLGHVGNPKFEFDIEYIVKLCKEYNKLIEINSASFTVRRGSSPICREVALACKRYETNIIVTSDAHSMYKVGDFKDAVELLLSIDFPEHLILNSDYDKLIKYLGI >gi|343386169|ref|AEM21659.1| transmembrane protein, 1165748..1166521 [Brachyspira intermedia PWS/A] MLASVIGAICGIGGGIIIKPVLDSLNVLEVSKISFLSSCTVLSMSLYTFIVSKIKHDSLVDSRVATPLALGGIIGGIFGKMLFSYVIRLFNSENIAGIFQSSILILLTFFTLIFTVKNIGDKKIKSMHIQNIFLCIIIGLVLGLLSSFLGIGGGPFNIAFLYFFFSMDSKVAAQNSLYIILFSQISNVFISVADGDVLKVNLSYLIVMIIGGICGGILGRFINKKINSKIVDKLFIILLLIIILITSYNIYNFSVNI >gi|343386170|ref|AEM21660.1| imidazolonepropionase, 1166548..1167780 [Brachyspira intermedia PWS/A] MLDIIIKNIGSLVTAESNTPLFGKNQGNIKVYNNVSIGIKNGIIECIGDTVKGKAKKTFNANGALVTPGLIDCHTHFIYGGSREDEMYNIISGHMSYSDIIKSGYGILSTVKDTRNQTENALYKKSIPILDKMLHYGTTTVEGKSGYGLTIKDEIKILKVMKKLNDSHKIDIVSTFMGGHVIPEEYKNDRASYVNLICNEMIPEISKLGIAEFCDVFCENCGLDMEETHKVLNAAQAHHLGIKVHSDQLETSGGSYLAARFKAISAEHLIMSDDRSIDVIKNQNVIAVLLPNTSFYLNMPYARARYMIDKGVPIALASDYNPGSSPSLNMQFIMKLSYIMYRLKPEEILNAVTINAACAINRGKEIGSIEEGKKADIIVWNCDNLNFLLYSMDDDLCSMVFKSGELVYHN >gi|343386171|ref|AEM21661.1| TPR domain-containing protein, 1167918..1168898 [Brachyspira intermedia PWS/A] MEEELFSRKESVKDIFNIIETKLKQGLFTESMEDFDRIMSKDFECANLYENISCVKFWINRLDKFKTVERNCIEYCKLLDSTYKKFNVFVHGKSYDENLISINAIHYYVYNKIIELIMQRSTNDIEGTEELRLLSNAFIELKDYSRALKSYEYLNTIEPYNSRTLSYIAMIYDKLGDEKKCKMYVREALFYDPLSIEFENISIEIVREIRDIIIKRGVHNNSQEEIILWMSAYGELMNILDVKRPLNEQEEFDLRRNISRLEADYRKIKLRETTAPKLLSSYAFLTTHLIMRQNDSDVEEVKVWGRKMAVIDKDLLQYYIKILDKE >gi|343386172|ref|AEM21662.1| putative transcript cleavage factor/TPR domain containing protein, 1168903..1171110 [Brachyspira intermedia PWS/A] MSEALQKLENVFSEETFTRRPLLNYTTKYFVDLSGILNDINDNNDINSAIETAKMQLDKNPNHISALYANGFLNLKIENYSEMSLEKLLGIFKNAKKWNIVEFVSQKILDEYYESDYALRYLASYYQSTNRESEALEIWERLIRFDVSNPELPEKIAHTKEMAGDIKSAVHYYKIAFERNLMRERDNAESDIKKVLQYEPDNYNYLLKYENALKALVDSNIMIDVWKIIFFYYFENNKYNEALKTIKNLLNYEQDIVAQNNKKAKFFRHRLVDVYKALYPNHTLFEKIEEISSIINVNKKPKDCIEIFEKYIQYDVDKYVIHRNFGVGKIKSIDINNVNIKFVSQEDVRKMTFDMAIQSLTTLPNDDINVYKAYRLNEIKKIAEENPTELLTIILKYRKTITTKDLKQELTSKPDIVVAESAYTKWLESAKKSVRASTTVKFDKNTFLYNEEAETYDAESLSKFNKTDNFFERYQIYMEYLTYTPNLNSEEAKEMNDYFVNISKDKKAPNDQRIISTIYLRSQSNADSSIPLLSDIVKNIDDYTHVYEVLPSSNYREKFIKAIWDGRRDDYYNIILKMLYSPQVKNNYLIVNKLFEDGKTDMLAKTIDDIFLHYRECPESFVYFAQKILDGEYYDETGEDININKNSLMIGLLSIMPHLSKMVDKKETSAQARKLLKIVYDLVFDKAYLLKFIENESEEDVKIIFSEFQKLVNLEQHYKTDIISAVIKRFPNWKI >gi|343386173|ref|AEM21663.1| transcriptional regulator, 1171257..1172456 [Brachyspira intermedia PWS/A] MDIIMKLRLSKRALKEDFQSSFVKIMLEVAAKGDLISFAGGLPNPESFPVEEIKAAANKVLETKGAYSLQYNSTEGYGPLREFIANRYKKQGIEIEASDILIANGSQQALDIISSCLIDPDDNVLVEDPSYLAALQSFHLYNPKIHTVNLNEDGADIDEFKEAINKYDNKFFYSVPNFQNPTGITYTNAVREKIAEIMKGKDTFFVEDNPYGELRFKGEHQKSFGTYLGEQAILLGTFSKTVAPGMRLGWIACRQKELYAKMKDYKQLIDLHTGTFAQVVVSQYLEDNDYDEHIKKIIDLYGRQCNYMLEAMDKYLPKDMHWTHPEGGMFIWATLPKGIDAVELSRKAAEDGVVVVAGEPFYEAKRGLGTLRLNYTNSKPEDIDKGISILAKAIEKMRK >gi|343386174|ref|AEM21664.1| putative rubrerythrin, 1172704..1173312 [Brachyspira intermedia PWS/A] MIKKSSLFILFLFVFAGLVYGQTAKSTLDGMMQSYNGEMNASASYAEYAKKAQNKSVAALFKAASAAEALHAKLLNDMALSSKLSTKALTAKINAIKTGTDVDNLKSGIAGETYEYTKMYPAFSKVASQENNKNVAELMNRIASVEKTHAELYNKTIQDLNAKKSVPTVYYLCPVCGYVEAGSAPAKCPLCNATASSFQAFN >gi|343386175|ref|AEM21665.1| Signal recognition particle GTPase, 1173451..1174428 [Brachyspira intermedia PWS/A] MINAIYYAVYEYYNNSMLCTCSTFDFSFSVNEKNKKPKVSLTSSKSKFSLSSLFNTSSINDEFFASLENTLITADAGVETTKDIISKLRDVIEKENIKDPAEAKKHLREILISKFISKKIELKDKTILFIVGVNGVGKTTSIAKLANILKKDHKVILAAADTFRAAAIEQLEEWANRLSVTIVKGQQAGDPASVLFSALDKAKATNADIVIVDTAGRFHNQENLVRQLEKMKKIATERFTEFKFVPILVLDANVGHNGIEQAKVFTNALDIQGAIVSKLDSTAKGGVAISIAHYLSLPIYYGGFGEKVDDFKEFDAESFVDSILQ >gi|343386176|ref|AEM21666.1| 3-phosphoshikimate 1-carboxyvinyltransferase, 1174452..1175714 [Brachyspira intermedia PWS/A] MSFTVKPSEIFGSIYIQMSKSDAHRALIASSLAKTPSIIKHWIDNVSVDVEVTKNAVSNFADLEVIDDGIKVFPKKEYKKELTIDVKESGSSLRFLIPIMSALGIACTFTGSKKLFSRPMEVYKKIWKEQGLEFIHSENSIKISGQLKSSNFKVLGNLSSQFLSGLLFALPLLDGNSNIIIDGELESEPYVMMTLKTLKAANIETLRHDNNIIEVYGNQEYSGIDYEVESDWSHAAFFAAAGALGGETTLYGLNKYSIQGDKEILNILKFMGASVSYNDDSSITIKKTNRLHALDIDMSDIPDLGPIITTLAATAKGRTRLYNAGRLRYKESDRMNDLMDSFLKIGAKIEVTEDEILIEGVERLKGGDTTSHNDHRIAMSLAVASAVSDNDIIIDDAESINKSSFNFVEQFRSIGGKIEL >gi|343386177|ref|AEM21667.1| ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component, complement(1175716..1176603) [Brachyspira intermedia PWS/A] MGYLYEFAGASAVAIAKEKGFFEEENLDAELFQFFNGHAAILSMISKEVDFTYIGHAAHSLIINGDVQILIPNGISKGEKIITGKWTGINSISDLKGKIVATHLGTSGEAMLNAVLKNNNIKLQDINLTNINITNLANALINRKVDAVSTWDPYAREITEKIPNDYNLLADITNYSDEITLTSSFVSTAEYINNYPDIVKRFSRAILKAMDYRKNNLYEAAELTAKLTGNDIKSVKNEIDTGIWFSSSDIKNACTSGEILKWYEVQQNIFLDSKIIKETTPVTNYIQLSMLTNIL >gi|343386178|ref|AEM21668.1| Glycosyl transferase family 2, complement(1176754..1177485) [Brachyspira intermedia PWS/A] MKAIIVLPTYNEKDNIEKMLNKVLSLPEYIEILVVDDNSPDGTASIVEKYLSNNRVHLLKREKKEGLGPAYIAGFKHSFQYNPDYVIEMDADFSHDPDFVIKFIERMENEKLDLVIGSRYCNGISVVNWPLRRLFLSYYGNRYASFILGSKIMDITGGFKCFRVSVLKNMNFDNILSAGYSFQIEMNYSFESNGYKVEEEPIIFYERRSGQSKMSKNIIAEALFRVVRLRFRNKKKYFNNQSK >gi|343386179|ref|AEM21669.1| hypothetical protein, complement(1177482..1180187) [Brachyspira intermedia PWS/A] MEKFNSSLFSKRYEGYNLEKEICVINRGIVENDIYALDFLREANYTYNKDKEYFYSLYKTLETSNNCGIYLILTAILLKNEDEKANLKIAEKKIDLLMQKIYDSYYVKYNVVEHLGTPNSITVINDDIIYEDDKRYDLIKKFHVKKSAFGYFSALKPYTPYHIKRAPSNSDIEFIKKSLLNNYRIYYILLLSDYSKKAKKLLNIILKTNSYKALTYIMLIRKEGFATTYQESLDYLTNLNITLADIIISYIFFYSYNDRISYYDSFAVQIKNREFNSFFYSLIKKNSEYFESLFSNKNFVKKVTKNSKNFIPFLNELYSKDIDFGSSKILCSLLENQSSNIRKAAIKIINRKKKESYEYLKTLDNDLARDILKRWKNKKIINSGFKDIDSIVNFVNKNYNKKFEKNLLCLDESLLYGVKSKDSNQNIPIIVIKYIYLEYSRLKAPTKIRDLDKLISYFDFNSFINVIKTIYERWIFEGADTTYKYVMIPYLVYESDYKIEKVGYNLKEWCESGRISLANYAISTLAFNGSLYSLILIDYVSNNIKYYQIKNTSKLAFKAAAKKLDISEDKLADNIILDFGIDKEGKKLLKDDSYSFTLYINEKLDIEKIFDNKKKEYVSKIDKYHNISKNLLEEFYSIKNNIKASYKFQASRLNKALMTGKKWLADDWKKIFAENYVMSTLADIFIWTIYNKNDKILKQVQYDRKSNTFFSIDNNEEVKLNKQYKLSLASPVEMTDEEIKKAKQLLTDLKIKQPFNQMQNINFSFEDEDIKENIIVKYRNKEVKIKTFKNLIDYLDMELDYENSYIVGYKIIDTSISVGIKINLMGMDNAIDDNDIILFGDIVFYTIDNNEIFSYKNIIDPRTSYVRYVKYIMFNIDNYIKKNMQKTLKVAKRNRRQSDTK >gi|343386180|ref|AEM21670.1| Predicted Fe-S-cluster redox enzyme, complement(1180273..1181301) [Brachyspira intermedia PWS/A] MAKKISIMNVSEEELSKFCIENDFPKFHASQILNWIYKKYAISFEDMSNIPKNLRNLLDEYYFIHNSKIETISEDEYGTQKLLISLYDKKKIESVILNKKDRVTFCLSSQVGCGYGCAFCATGSMGLSRNLTADEILAEFLLMRAVTKKVNSIVFMGMGEPLANTKNLFKAIDTINSFKGFNLGIRHITISTSGEVAGIKQLIERDLDCRLAVSLHSLKNDVRDKIMPINKRYPIENLMAILKRYSRNGKRMITFEWVLIKDVNDSVNDAYRLVNLKKEFPFKVNVIPMNPVEHAPELQRPNKDIILRFKSILKDNGIEVVERFKQGQEILAGCGQLAVKNM >gi|343386181|ref|AEM21671.1| conserved hypothetical protein, complement(1181453..1181692) [Brachyspira intermedia PWS/A] MPTYEYKCEKCGHEFEEFQSITAEAKANCPECGSEAKRMISLNSGIIFKGKGFYVNDYKNSSSSSSSSSNSGSSSTKSC >gi|343386182|ref|AEM21672.1| hypothetical protein, 1181779..1182798 [Brachyspira intermedia PWS/A] MAVFYVDKCTSNFILNESKYKDYFMNKRIFELNSEDVLNMNASLLKEVIKKSEGRSVMAEVCCGHQSFIDSVSNAETASAFGADLITLNLFDMNKPFIWGLYEEKHDASEKIWLVSKLKGLINEVNNTNENIIRDLKKVTGRLIGVNLEPVPDGSNYNSGFRASKENYEKLIKYGFDYVVLTGNPNTGVTIESISKASRELKDICGDKILIVAGKMHGAGGDNVYSMEELDSMVKAGADVVMVGAPSALPGYTVDFVHEQIKRIHSLGALAKTAIGTSQEGADVNTIREMTLWSKMAGADIVHIGDAACGGMALPENIMAMSIAIRGIRHTYRRMAYRK >gi|343386183|ref|AEM21673.1| xylulose kinase, complement(1182861..1184408) [Brachyspira intermedia PWS/A] MHTLGIDLSTQSITLSIINCENYKNELNISIAFNSLEEIKYSKMNKNTLLIDSNINGKAEQDINIFLSALDKALLQLKEKFNTKDIKAIQISAQQHGHVYLSEKYKSNIEKLRDKSSINNSLAELLNDSYSYDYAPIWRTSCTQKEAEELRNAVGGKDNMIKITASNSPLRFTGAVIKYNFDNNQDLSKNTYKIFLLNTFIASILTAKDNIPVDFGNASGMSLMDYTKREWNDTLLNTVSNDLKEKLGNINDPSSFAGYICEYFAEKYGFDSECIVGIGSGDNPQTKVLYKGDILSLGTSFVYMLNIDENSRDYSGVSNAMYDGIGNPFMIFCRTNGAMVWDEIMKLYTRNYKEITESLEKNIDNMPLVLWQKENESVPISRAFPIKRYHSEPSFDNDYKGIVLSSLGLVALYSEQFTSENKKDLAVTGGPTKDKEILKIIANIWKCPIRILPSGGASLGAAISAVLLLGKKISLDDIRNSLIDNTFIEPDDALANKYHDYMMLLKEKFHEINKK >gi|343386184|ref|AEM21674.1| hypothetical protein, 1184605..1185750 [Brachyspira intermedia PWS/A] MKYQVLAKEKTLKNILKECIKKDRFTSIDIVESLKLTKPTVNESLDILFKNDFITKENFTEGMVGRKAQIWKTTLHKKKSLAIDIDFDLVKIAIVDMAGNYYNYQEYKKTINNNNFFNVISFVVNDYREKHKESKEIKRLGISIPGNISFDRKNILYATNLGLENINISYLENELNLDIILENEANSAVLGEFFLSKEADKNNYMLISISNFGVGGGQIVDGKLLKGAHRLAGEIGHFTIIMDGEPCTCGNRGCFERYASYDGLKNIMKKHKLDFDDINKLFESYDKKSEKVIKEYCKFLGRGIRSLLSIYDSNKIILSGKMTDYWDRIYPYVQKEIFENNNFYSKFNVLLLKSKLGDKASLVGVGLINFFDFIYDSEFFN >gi|343386185|ref|AEM21675.1| xylose isomerase, 1185870..1187198 [Brachyspira intermedia PWS/A] MESKEMEYFTSTDKVLYKGKDSKDAFSFKQYNASEVIAGKTMEEWMPFAMSWWHTLAAGSADPFGAPAASRPWNGKEALEASKMRVEAGFELMQKLGMNYFCFHDRDLAPEYKTLKETNEKLDMIVDLIQESMSKTGKKLLWATSSLFTNPRYMHGAATSPYADVFAVAAAQTKKTMDIAKKLNAKGYVFWGGREGYETLLNTDMKRELDHLAYFLSMAVEYKEKIGFKGQFFIEPKPKEPTKHQYDFDAATTLEFLYHYNLDKYFELNLEVNHATLAGHTMQHEMQVARNHGKLGSVDINYGDTFLGWDTDMFLTNVYDAVLMMVEIIRNGGLKNGGFNFDAKVRRPSHTMDDLMYAYIAGMDTLAWGLRIADKIVKDGCFDKFIEERYSSYNSGIGAKIESKSTSLEELYDYALALEEKELPSGNQELLEAKLNQFIYNL >gi|343386186|ref|AEM21676.1| D-xylose ABC transporter, periplasmic substrate- binding protein, 1187220..1188245 [Brachyspira intermedia PWS/A] MKKIIAVLISLSLFALSCSSKAADTTADKGGDKIKIGLSLDDLRLERWQKDRDYFVKEAESLGAEVIYVSSDGNATKQLADIENLIAQNVDVLVVIANDGNSLSPAIMQASQDGIPTLAYDRMINNCDVAHYVTFDLEKVGRMQAEGILEITNKGRFYYLGGSPTDNNAQYFRKGAMDALKPYIDSGDIELIGEQSTRDWLPDVALQIIEDMLTAQNNNVTAIVAANDAIGGAAVQALKAQGLAGKVPVSGQDADLAALQRIAKGEQAVTVYKPIHLIAKECAKAAVALAKGEKAESNSSLNNGYKDVPTFYIEPIKVTKDNLDSTVIADGWATKEDVYGN >gi|343386187|ref|AEM21677.1| ABC transporter related protein, 1188375..1189868 [Brachyspira intermedia PWS/A] MKDIHKSFSGVKALSGISLSLKKQEILGLCGENGAGKSTLMKILSGIYPFGTYEGSIFINGKEMRFNGIKDAESAGIAIIHQELNLIPEMNVTENLFLGNFINKFGILNKDEMYVKAKEALSVIAPNIDPESKIKDLGTGEQQMVEIAKAILKNANILIFDEPTSSLTEKEISKLIEIIFSLKEKGLSAIYISHKLDEIEAVTDSVEVIRDGKSVGGGKTIDMNSNKIISMMVGRSIENLIPRRSREIGDIIFEAKNYTLYDKVNSNIKKVDNASFFLREREILGFSGLVGSGRTELLSAIYGAYTGDYVGESYLYGKKLNIKKTEDAVDLKIGFVPEERKTQGVILNDSVQNNIVLSTIKNYAVRGILDKNLQKEAALNYKEKLSIKIPSLDSPIKNLSGGNQQKCVLAKSLLINPKILILDEPTRGIDVGAKYEIYQYIFSIVEEGCSVILISSELPEILGLSDRVIVMHEGKIKASLDNNGLTQETIMTAAIGE >gi|343386188|ref|AEM21678.1| hypothetical protein, 1189912..1190991 [Brachyspira intermedia PWS/A] MLFIIVIILWGFFGAITSGSFLSSRNISNLFRQMSITGILSIGMSFVIITSNIDLSVGSMLGLLGAISGILLRSDVNAPLAIAITLIFGLIIGAINGFWCAYRKVPAFIVTLAGLLAYRGVVLYITKGQTLAIQDSHFNYIGNGNISPVAAWIILIISIIILILANMKKLLHSRNESEKKSLIMNLAFIIIISFIFVYWMNGYRGIPLPVIIMMIITVIASYISNNTVYGRIVYSIGGNSEACKYSGIDIKKYIFMVFTVNGVIAAIAGIINTARLASAVPSTGVNSELDAIAACVIGGISLSGGTGAVLGALLGSLIIASLNNGMSIIGLDSSWQNIIKGIVLLLAVWMDIATKNKSN >gi|343386189|ref|AEM21679.1| D repair and genetic recombination protein, complement(1191315..1193024) [Brachyspira intermedia PWS/A] MLKYLEIRNFVLIDKLKINFSSGFNVLTGETGAGKSIIISALELITGEKGSTRMVGANGDRLIVSGNFSLQSSADIVKKKLKEWNIEINNDELNIKREITKDGKSKSFINNVGVKVAELKELGDLIVDIHGQHEHQSLFNPANHLNFYDSYLNIDDKLENYKNHYNKLTKLIRQYNEISQNKNNILKEKSFLEYAIDEIEKAKLKPNEDEEIKNDITMMSNAESIASSLSSINKDIFGSESGAYTKLNRSISALQSISKYDSRLSDIASQIEGITLNLEDIKSVLTEIRSKTKFDPEELQSLNERLFFINNLKKKYGSNIKEIISYAKEAKEKLDSLNFSEEDIENLKKEIEELREKTSILAKEISDIRHNRKDDFIKAIENEMNDLGMSSTKFDVEITLDEDDDGILNIDGANLKANSTGIDNIEFIIAPNKQSMFQPLRKIASGGEISRIMLSLKNVLSLGDYCETCVFDEIDVGVGGRIAEVIGEKIAALSKRKQVLSVTHLAQIAIYANNHFKVTKNEGDDIVTSTIEELDDSMRVHEIARMITGKEITEASIKHAEEMLEHAKK >gi|343386190|ref|AEM21680.1| ppnK, inorganic polyphosphate/ATP-D kinase, complement(1193024..1193908) [Brachyspira intermedia PWS/A] MNIIIMNSRKKQQIGIIVNVLRTDTDGILKKIDNIIKKYNIEAIIIDYDISSHNNIKKATKELKNVSMLISIGGDGTLLSALKIAIKYDISVLPIYNGTLGFISEIPPEEAYLILEEYFEDKKTLYEIEPRTLLSVNVYSKEKNTYKEYLAVNELVLSKCDGRAIYIDITISGKLISSIVGDGVVIATPTGSTAYALSAGGPILAPTIDAISFVPIAPHSLTFRPLVIPKCDNIELELTEKSLKAMITIDGYDICQFKNDDKIIAKISNKNCYIFQSAKRLFYDILRNKLNWGR >gi|343386191|ref|AEM21681.1| 1-acyl-sn-glycerol-3-phosphate acyltransferase, 1194142..1194756 [Brachyspira intermedia PWS/A] MAKFWGRGLMKMAFISFNIEGKENYDPNKTYLLTPNHQSAFDIFACFSVFKKSFAFVSKDTYGKVPLIGFGMSLSNYIFVKRGTVGAVKSIDDMENRLRNNISVVIYPEGTRSATGEIKKPKRGILKIAERCSDIPVLPVVIYGTKDIMKARTIKISPFKKITVRFLEPFYFKDINGDDNAKLDYWYDIMTKNYNELKDKLIKK >gi|343386192|ref|AEM21682.1| iron only hydrogenase large subunit, C-terminal domain protein, 1195197..1196669 [Brachyspira intermedia PWS/A] MNINNNASQLKKEILVKIALMFIEDRLIEDIDRLPIEIIPRDSKSIRCCIHNDREIIKNRIMARLGISVEGKEDSGIPLSEYAKLALERDKPTWPMLTVLDEACNACVRANFMVTNACQACLARPCMMNCPKDAITILDEKRAHIDSSKCINCGLCLKNCPYHAIIYIPVPCEESCPVGAINKNDQGKEVIDYHKCIFCGNCMRECPFGAMMDKGQLLDVLKHLKADEKVNVMYAPAIASQFNAKPGQLKSALLKIGFNKVWEVALGADVTSDREAAEFEERMERGDKLMTTSCCPAYVKAVRKHVPELIPCVSETRTPMHYTAEMMHEDDPDAINVFIGPCLAKRREGLDDDLVDYGLSMEELDALFIATGTDVSKEPDLDIESVPTASGRKYAVSGGVAEAVKVRLKHPEKLKAAVINGLDKDGMKQLKGYGKVQSGETPVTDDTPNLVEVMACNGGCVGGPCVVKNPKAAAVQLQRYASTGTEVKKD >gi|343386193|ref|AEM21683.1| ankyrin repeat-containing protein, complement(1196752..1197393) [Brachyspira intermedia PWS/A] MKLSFIFIFILYISAILFADTRSDFFSAVHSGDIKSVKEYIEMGINVNLQDERKRTPLMIATYKNDIKMVKLLVDNDANVNIQDAKLNSPFLYAGANGMLDIVKLIYKKADTRNVLNIFGGNALIPACEKGHLGTVKFLLENTDIDVNHINHLSFTALLEVTILGNDNLNYVEIVKLLLEHGADKTIKDKNGHDALYYAKARNLKNIEKLLTE >gi|343386194|ref|AEM21684.1| fibronectin type III domain containing protein, 1197586..1199004 [Brachyspira intermedia PWS/A] MKVHYIGFLIAFILYFTANLNAVVYDVFSDTNNIYYSTLNNFTNSYILYDSDSALNYLTGDTALDSSILQGLIYSKDIKSIEGANGGDAVFFHNIKSYIKLDYYTGDGTHNFDDTMTSFTLEFYLNPYRIRMNSQVLSKTAIYNENGVTKSSGIKANIVNGRLVWQFNNLFSYNGVYTNVMLTQGEYLKENEWRHHSVSFNAATGKLVKYIDGLEEQVVYLTSTGDETGSPYTIEFDNIKLDPLYLGNGFIGGLDAFYFTPRYKQTFNLYPYTADGEIISKVIDFEDQNTFIDSIDYVGNGTNGSYIDLYYRTSDYYFAPGDVNIAWEPLKNHTNTMTNTMTRYIQVRAVLKSNVDRNVTPILNNVSINYHNPEKPLVPSNLTVTAINGTSVTLKWNGSHENISGYKIYYGTKSGVYNEAQYTPIVIENVQEYTIEGLQEGRVYYFTVTAIGGEGGNIESGFSEEVYVRPIQ >gi|343386195|ref|AEM21685.1| TPR domain-containing protein, 1199019..1199882 [Brachyspira intermedia PWS/A] MSTNTKAMKLSNLAEELLKKGVNEEAIEALKRSMRLSTSEDMKAYLQVAVSLFENGDYEHAKIFLNTFLEYWMAAEAYFILGAIAKKEYRLEEAFELYRKGITLYTSSNLNPYYEFLSLCTLLKEEDKGLETAKNVLKINSKDRVALVYMANYFFRNKLYKEAMNFYKILVDNKLADHNDYHYYGVCLHEIKDYKKAENMYLQALAMYPADTPEVLALKNLRSKTLKDNYPNLKESKEKYTNKIKENPESSDYFHLGNIEFIDGNYEKAAELYSKAKEVYEEQVVIL >gi|343386196|ref|AEM21686.1| TPR domain-containing protein, 1200284..1201558 [Brachyspira intermedia PWS/A] MSYFEEGLQLFRETQFEKASELFLKALKEDANNSEIYNYLGIAKQALGLFEEAINYYNKGIEVDENYAELYYNRANCESNLGLYEAAVKDYDKVIELVPTHSKAYDDRGYAKGNLGYYEEAIKDIDKAIVLDSNNIDAYIDRAFIKLMSKKYIEAIEDYKKVLELDDTEVYAYNGIGDAKRSIGLYEEAITYYNKVIELSNGNSSYAYNNRGACKIGLGLYNEAIIDINKALEIYDEYTDAYNNRGTAEYNLELYKEAIKDFDKAIELSPQYFYAYNNRGNAKSALGLYEDAIEDFNKAISIEPQYIDAYYNRAIAKNNMGLHNEAVKDYDMVIELDNNHINAYYNRGLSYYNLADYEEAIKNYDRVIELNSKLADAYNNRGFAKYSMGLYEEAVRDYDKAIEIDPNYEKAKQNKEEALKKLSN >gi|343386197|ref|AEM21687.1| TM2 domain family protein, complement(1201650..1201853) [Brachyspira intermedia PWS/A] MEISDKSWVVTLILAIFLPVHRFYVGKIGTGILYLITFGGFGIWYIIDIVMIILDKFTDKEGRKLKK >gi|343386198|ref|AEM21688.1| flagellar hook-associated protein FliD, 1202051..1204255 [Brachyspira intermedia PWS/A] MATSEAFLDEVYKNAVEAEVNKRSTTLSNLADNARDYQRQISAYEDLKARLDTLATASKELYGFRSPFRNYIGTGEGIPDYFTVTANRLANTTTYDIAIKDIAASQKFSSKAFNMADTLPAGKIVLKIGEEETTIDFAGGSLVNLQKAIDKAFGKKIKTTITQKSRNLQVLTMDLVKTGSKNIVEVVSDESGILKELNMFTRRPYRHLGHIFNEQLLSKWEDESDNLTTNYMVKNDFIVLKGENKLSLPLHREAEVNENITLSITARASDSLDDAIEAPIMPPTVDLSIPDTGLTFNKIDSVIYKDVELYGEGLSPADSSRTFEDIKKYKDALEAERKAKEGVEAEAPEPVDDTGFNSEIIGVKYINKAGDEVEKFFALPTISASWQRLNIPIGGQFEPGDVITEVILINKNAGYNVFYKDLLVEDMGKEEDAPNYLISEATDARASIDGVDVLSESNEFNDVVNGLNITAKKVTPEAFATTIEVDKEGVVNAIANFIRAYNEVIDLLNDTMLRPLARDIRDGLETMNRTDLNDLATTLGVEFNVDMSDDALRKKLYYVGVFSGNTLVSTLSQRVRMIVADAYETEYGEELALLDQIGINRGDAGEDWAKVKKGFLQVDEEKFMNKIETQMDGIEELFSNDTTGDDIPDTGVAYVMSDFVTPYSQTRGIVENSISMTKSRLDDNKRRMDDEKDRIEEYRQQRLASYYQMQAELQQAERERKRLESSLNQNNGGN >gi|343386199|ref|AEM21689.1| Patatin-like phospholipase family protein, 1204331..1205104 [Brachyspira intermedia PWS/A] MSYEKIGLVLGGGGGRGAYHIGVWKYLKEAGIYDKVTAISGNSVGALNSCLMVMNDYEAAEKVWIKEIETKILTPKKIKDYFKIDKSSIFGIFSREGLIEVIDKYIDLNLLSNYHFNLYASCTEYNAPFFIKSKYFKLNGNSNERIKKILLATSALVTVFPTEKIDNKFYLDGCYTDDCPIEPLYLYEDCTDIIVIHLDYKKPVKKKDNVNIYEMYPSKDLGNFFKGVLDFSPKGAEKRIEQGYNDAKNYFKYLSIF >gi|343386200|ref|AEM21690.1| HepA, Superfamily II D/R helicase, SNF2 family, 1205298..1208399 [Brachyspira intermedia PWS/A] MGMNTRGKSKKKIKENDNPFLNLNANAKENDELAKASIKTIANSVIITESDNKRIDRSKKEESSEIIDPSRKEWLYYTRSPLMDNYRDNLYREYYSLSVLLSLRGDNNNERTLGLSLKLIDLENKKEYRVGELESFLFSCVIGEKQNIEDDERVIELEDFSKAEAKLIRFLNNLYAEAKHIQENGKLWFKDYNAYQCLSLLKDVPNIRLESRVITFSDEVLNLQLESYYNENKDLVLNLSIKDVDLNRVYTFGENCDFVLYKDIFYETNPSYPRIKKNIFKDSIVVKKDYIKDFCSRVLPNLKKDFDNIELPEDIKENDILAFPAQALVFLDYDGTNVFSTIKFKYGSFTVDPYSGKFTSSNMFDNEVTEIYRDTEKEEYFCRTLSKYLEKVGDYTFATSDDEKIFYLCYKILPALQDRGWTCYYSESFKSLKLNVKPLKMRVSLTKDINFFEINFSFEGVKELHDLSEIVRAVKVENKEYIRLQNGSFVPIDLEVIDYIAKMFKENPIEQKEDNRYLLPMFSAPYFADMLEKHSGIELDLDDNAVDTIANIKRVEYDETPPKDIVGEFRSYQLIGYKWLRKLADMSLNGILADDMGLGKSFQTIATILKEKENGNKLTSLVVAPTSCVANWECEIKKFAPSLEVIVLSGNLKTRMKKIKAVSNYDVAVISYSTLRRDVKALSENEFNYLILDEAQHIKNANTQNAKMVKSLKSLKRLALSGTPIENSISEMWSMFDFLMPGFLGKHKDFVEDYEAPILAGLDSSSEALDNLKTRIAPFILRRLKTDVLTDLPPKHTVVSYCDLTKDQKELYMSILEAARIEIFETVKRKGFAQSHIEIFSALTRLRQVCCHPRLMHEDLRGESHTSGKFNMFIEMIKEAISGGHSVLVFSSFTRMLNLMRSAFKKLGIDYFYLDGATKDRMDLVHRFNAGEAPIFLLSLKAAGTGLTLTQADTVMHYDLWWNPAVEDQATDRAYRIGQKRVVTNYKLITRGTIEEKILELQNKKRLLIDTVVGDSMGDINKLSWDEVKNLIN >gi|343386201|ref|AEM21691.1| leucine-rich repeat-containing protein, 1208408..1209286 [Brachyspira intermedia PWS/A] MLSDKDFNKIISWASDLEIQNFPRSKEELENIQELDLYDLPCNLFLDEISKLKSLKRIWFMYNGFDEIPNFIYSLENLEEINLSGNNISFIDDRISNFKNLKIFNIYENKISSISREIINLKKLEVFNISKNNLNDIQEEIFYLDNMKNLDLSANKITNIDLKISNLKNIEALDLSSNNIEIIPKEISYLKKLKYLNISYNKYKTFPEELFDLTNLQIFLIGSNNLKEISDSICKLKNLEELHILSSSIKKLPELKNLKKLKELILIDTKIKNKKIFNDVINYSCFNNNSDK >gi|343386202|ref|AEM21692.1| non-heme iron-containing ferritin, 1210006..1210548 [Brachyspira intermedia PWS/A] MSIIKEDTIKLLNIQLNKELYSASLYFNMAGWCDKKSLKGCSSFLYGHYKEELEHFEKFRDFINKVGGQAVISEMHAPQSDFNSVEHLFETILKHEEYVTSCINELVGKAMENKDYITSRFLDWFIQEQLEEEELFNDIIEKIKMLGGGNLEGRNLYTFDKAMNTLNTEKHSGGLDINVQ >gi|343386203|ref|AEM21693.1| ABC-type transport system, ATPase component, 1210631..1211416 [Brachyspira intermedia PWS/A] MPSNNEPITAENFFNYDKSNPYEIRAVNLTKYYGKRKIIGDISYNVKQGEVVGLLGPNGAGKTTSFYITVGFVTATAGNVYLNDLDITKLHMHQRATLGIGYLPQEASIFRKMSVEDNLLSILEFNKSLSSKQRMDITDMLLEEFNITHVRKQKGYTLSGGERRRCEIARALTVNPKFILLDEPFAGVDPIAVIDIQNIIASLKEKGLGILITDHNVRETLRITDRAYIMGNGQILVKGTPDEIINNPLARKVYLGESFTM >gi|343386204|ref|AEM21694.1| hypothetical protein, complement(1211503..1212426) [Brachyspira intermedia PWS/A] MNNITKKYITLSSIIVILIIILIAITFMKNRGYSLPELKKINSNISEITIKRGANETIQIKYNDNKWTVNDKYNADDNLVTSITNALSTIQPIEIVSRGDDNSISKYKLTDEEALTVVALDSSSKEVRNIKFGMKSTFGNSVYSKINNDNNIYLLGNTPTNPKDIFDKTENDLINKTISKVRNDDIAQITIEYNNNSYTLSKNTNDTNNTWIKNWNANTVKGNDVYTSIFTLANLNADGLITNDSTSKNASLYKINIQALNGNVSYEVLNKLDDNNYEIVSPNDNNRYYMTESSFNTFLEAVNYIIN >gi|343386205|ref|AEM21695.1| Holliday junction resolvase, complement(1212499..1212870) [Brachyspira intermedia PWS/A] MDMDIKIPFPCRLIEESNARKVKRALMDIIEEKNIDTVVFGLPLSDEGKESEWCAEIRRFSEFLLKSVKVDIVFVDEYGTSKEADFILRGKKKKVKSKANDLIAATLILENYLNVLNMNNRNQ >gi|343386206|ref|AEM21696.1| peptidase U32, complement(1212938..1214173) [Brachyspira intermedia PWS/A] MELLAPAGNKEKLEVAYHYGADAAYIGGALFNLRHQSKNTTIDELAECAQLAKNLNKKIYLTLNAFLHEYDKNNLKAYLKEIQNLNIDAFIVSDLGVLGIVKETIPEATIHISTQASVTNSYSCKMYESLGASRIILARELSLDEIKEIRANTDLELESFVHGAVCMSYSGRCLLSNFLNNRDANGGECSQVCRWNFKTYIEEKTRPGEFMEIEEGENHTTILSSRDLQMAEYLHLLQKAGIDSIKIEGRMKSVYYVANTVRVYRILLDLLDRIGYDSYPEAIKKEPIASYLKELDTISRRESDTGFYFGRDNIKPTLKGYLKGRRLMGMISDDSEEYAKITVYNTIKNGDDLVYIGKDFIKHNDNRFKLFIKTEENEFVEVDNIRNIDNAYIKSGVHDFKKYDIITVEED >gi|343386207|ref|AEM21697.1| hypothetical protein, 1214310..1215200 [Brachyspira intermedia PWS/A] MNEEELIQLKENLFNGEYSDILKPLSSANIFLAKSVLDSYIKDFSSKRKLQAIGLFTSNNYDFYYEDDGSVLRVIKELINNKNISGIDNINFDLTVNNALLYGDFVRFIYALYFGGLREELNILLNKMHEFILIITSNIVLNFKNANLADKLSIYITSSIYRYIFDVFSDFYAIYGDLKNKADVMYYKSYITCNIMSDYKGLVGPDLIKTALCFEEIQDFEKAEKIYESVIIDFEHVLSDIMCNFDNYNVKNKAEDYVALISLWQACNGINRLENINKYDSKIESIEEAINKLNSI >gi|343386208|ref|AEM21698.1| hypothetical protein, 1215258..1216109 [Brachyspira intermedia PWS/A] MCDYKDFKYFNTLNDYFVRYLFSDKGSEVILLDFINSIMIDSNMKTFRSLEILTPFNYKESYQDKETIVDVKCITHNGSVVIIEIQLQGNSRFPERILYYWASNYSKLLKQGEKYDVLTPVISINLLNFNLNDDDNIHSCYMIYETNNKKLLTDHLQIHIIEIKKFKHNLLQYDLNCWLKFFTVKDNREEIMSEIVKEKPIMEEVQKKYNNFIKDRLMMSEYDKRQTYLYGNQIMLEEERKLGIKEGIEQEKYSLAKNMKNKNMDIELISELTGLSIDDIKSL >gi|343386209|ref|AEM21699.1| 30S ribosomal protein S17, 1216126..1216758 [Brachyspira intermedia PWS/A] MKKLEDVNNIPKPSIEEVESYLKKWHSLENYDYQEKALNKLFFELCPDNKDISSILIKAATLNDFYSTNIFKIFDVAKHIESLNHIKNKPSIDERLNKEDVSLVDDIKKVKIINKDNEEKERNFYSFATKYCSHHKPEYYPIYDKYVDVILRYFRREDNFYKFKNDDLKEYCKFKNIITQFMKFYKLDNYTFKEIDMYLWQLGKKYFSDK >gi|343386210|ref|AEM21700.1| pyrroline-5-carboxylate reductase, 1216852..1217643 [Brachyspira intermedia PWS/A] MIIGFIGAGAMGGALIEGFIKSGIEYTNIVASVKTMEKKDYLEKNLGIKVYTDNRKVASEADVLFLAVKPYMIPAIAAEISSSIKVGATIISVAASVSKKDLSRYFSGSRIVRIMPNTPVKTCNGFISVVETENKVVENGVVELLKRVGMVKVIKEEQIHAYNAMAGCSPAFMYILIEAMSDAGVVMGIDRKTSIEMAAQVFKGTGAMVLESGKHPAQLKDGVCTPGGLTIKGVEVLEEKGLRSGIIESVIASYNKSIESEKK >gi|343386211|ref|AEM21701.1| REC, Signal receiver domain protein, 1217755..1218144 [Brachyspira intermedia PWS/A] MSIRYLENIMPKKTILVLDDEKSIRTLFEEEFKDEGYDVVSTDSGEEALEMLDKGTPHIDLITLDIKMPKMDGLDFLAKVREKHRELPIIICTAYNNYRHEFSVWNADGYILKSGNLTEIKDKIKRLIG >gi|343386212|ref|AEM21702.1| galactose-1-phosphate uridylyltransferase, 1218153..1219154 [Brachyspira intermedia PWS/A] MPHIRKDPVTKQSVIISSERTGRPSDYVNSTERQIANSELSCPFCRGHEMKTPDPVYTVYAEQEEIWQVRIVPNKYPIISETHENELPEENELFHASSSKGFHDVIIEHPNHYFNFYHAQTEDFFYIFKAVMMRLKDLGKNEDMMYSLYFKNFGPEAGASLYHSHSQIITTPFIPVQMYEEISGALDYYTKNGRCVYCDIIKEEKSLNERVICENNNFIAISPFASRSPYQIYIIPKEHSDSIIHVSSSNILDFSSILKDVFDRLYKLLGEVGFNYVLHTLLPTLENKYKNSSHWFLDIMPKMSKLAGYELGSGVFINSITPEDATQQLRNIL >gi|343386213|ref|AEM21703.1| glutamate 5-kinase, complement(1219149..1220294) [Brachyspira intermedia PWS/A] MKNIDLNNINRIVFKFGTNVLRNDEGYISLARIYSFIEAIAKFHRMGKEVLIVTSGAVGLGAKKINVTDLDEVALKQACAAIGQSQLMSIYEDGFSKFDIVTAQILLTEEDFSNRRRYLNLHSTLSMLLKYKVIPIINENDTVSSDELKQLYDVTQISFSDNDKLSALVASELDADLLIILSDINGLYDDNPKTNPNAKFIHEVFEVTKEIENLGLDASKGGRGGMKTKLQAAKIVTRSGCALFIANGKRPNVLNDIFETKEKTIFYPVEKDDELSTKKRWIAYATTIIGKLIVNAGAKKAVLEKESSLLPIGITKVINTFKKGDIVSIADENGTEFARGIINYNSDDVQKIIGHHSDDILKILGYKNYDAVITRDYIVLL >gi|343386214|ref|AEM21704.1| hypothetical protein, complement(1220358..1221605) [Brachyspira intermedia PWS/A] MLISINNKAYSQTTNTNNIKRYGQLSASLEMVAYGRMSDLIEQTGNEDTLGVLLYGDLHYIKEYKYASIEAAFNARFYEPLSHKARFYKDMSPPVFDFSKMNIFVNFKYVGIRAGVLEPYTKNIPMTSYFPTLFYYHTVSSNKATVLSGPRDMPIGYDSQFIPRYDTGIMVEANFFGVFIGVGMVNGEEGLDANSSKGLMAKVAYSNDYINTGVAGVVTELGSIPIKEWGDTVNAFFYFRNGRDGRFTVGIEGFWFRHGIRAYNEYFPGEDNTNKHHYNGGYYTDFSIQTFNGQNPYYGMSGFIFFEARRLWKFDITAHFGIHDNNIYSDAEDIYQLKYRAFLKITFNVTDDFKIMLSDTFTYDPVYKNNYQYYELENRNQVGVISYNEKSGHYTVDNDFYLGLSFKFGGVWGNK >gi|343386215|ref|AEM21705.1| ankyrin repeat-containing protein, 1221833..1222708 [Brachyspira intermedia PWS/A] MKKIFIAVSLFLFSFILYSQDITNSETSQNDILTNSSNEFFDYIEKGDVTKVRELLRQGTNANSTNSEGWSALHVAVKSNNAAIVKELLSQKWIDMNPVLPVDTILMEGDNKWYADGQTPLLLASYYGYADIANMLLSYGADVLAKDSIDDAMAVHIASARGNANVVSVILDSSAARSSGIDIVNVGDNTGTTPLMWASMNNQITVIAALLKFKADVNFQDDDGWTALHFAAASDSYRAVEILLKNNADANIADIEGKKPVDITTDTDIKALLNKYTSAAETENNTTEKAQ >gi|343386216|ref|AEM21706.1| hypothetical protein, 1222746..1223576 [Brachyspira intermedia PWS/A] MEAKKLQRFSEYSLSTYLLCPRKYRYTYIEKPFKKQKRSVNVYFIFGNAIHLACKEFYEQRAEERSLENLYNIFRNVWKRSGIRAFFNSREEEKELGERGLYMLSNFFNSFGQKVPYKIESYMENRVRDYILFGRIDRIDLSADGTLQIVDYKTTKYYDVGEDNEERDRKTIQLKLYACILDGLKCKVTSGSYYHFEDDKLDTIEFTPESINYLREWFDEIVDDIRYDRAFDKKVGRHCEFCDFFKLCQGKEDNIENLVLPSDELFMANIENSNNN >gi|343386217|ref|AEM21707.1| Eis, Predicted acetyltransferase-like acetyltransferase, 1223672..1224952 [Brachyspira intermedia PWS/A] MSTHHNKEDSKESIIKKKKNKFRIRYLTLEDLDDFNNLLRYAFQVSNNELINLGYEIDEIKQAKSAVLSKAKVLGWFDGEKLASQIAVYPMRMNIHGVIYKMAGITGVATYPEYSNLGLMNDLMIKSIENMKKEGQTISVLYPYSIPFYRRKGWEIISDKMSFEIKDTQLPKTITNKGRVERVASDSEDLIELYNEFSHMRHGALIRGDLEWEEYWRWDVDDTIVAIYYNEKEEAKGFLVYVIENDIFHIKEIVYLNFEARLGLWNYISAHFSMVDKVHGYNYTNEPIAFLLEDSEIKETIRPYIMARITDVKGFINDYPFLRKPKNKKINLIIKDNMAKWNNGSFLIYWDENKNTVCKRLNKEYKRNGKDRYIIRMNIQTLTTMLMSYKSPSYLYRIGRIESSIKGINLLESIIPKEQVYFSDYF >gi|343386218|ref|AEM21708.1| hypothetical protein, 1225018..1225983 [Brachyspira intermedia PWS/A] MRRNLNAVKTFNPLNDYFIRYLFTDKGSSESILLDFINSIMINANMKTFRSVEILTPSPKAGSRLNLKKNKNLKETIAPKVARKVDRCRRRLDVKCITQNGSVVIIEIQLQGNSRFPERILYYWAANYSKLLKHGERYDELTPVISINLLNFNLDKSKNIHSCYMLYEMNNKKLLTDHLQIHIIELKKFKKNILTKDLNCWLKMFTSKNLEASMSEIVKEKPIMEEVQKKYNNFVKSKLMMMEYEKKEAYLYGNQIMLDEERRLGKEEGIKEGIERGIEQGIEQGEKNKAISIARSLKKSGLDNKFISENTGLTIEEIEKL >gi|343386219|ref|AEM21709.1| RNA methyltransferase, TrmA family, 1225993..1227189 [Brachyspira intermedia PWS/A] MEVKIIDTAYGGYGIAKDENGKVIFVAHSVEGDILDITITKESKKFSYASINKIIESSKFRIKPKCKYSGICGGCLFNHIEYNKQLDIKKNVVLNAIRNINFNKDIKIICGNNFNYRLRVNMISDNGRIGFYRFKSNDFVNIDECIILKESLFEKIKNFSSENNITGSIYAIENNNDEALAFIELNKKINIKCFEKYFKGITVKHNKNIKSYRTDTILYKTEYGNIPIGHKTFFQSNLYLLDDFQYNVIKYLNDNDSTIVELYAGSGFFTSALKNRIKSFNNNCKFIASEINKDSVLIANKYDLKIKNEDALITLKNIDYDIDALILDPPREGIDKKVIDEIIRIKPKKIIYVSCDPMTFARDVNLLKEYYNLSDLNIIDMFADTYHIELISFLEYKN >gi|343386220|ref|AEM21710.1| putative RfaE, ADP-heptose synthase, 1227281..1227742 [Brachyspira intermedia PWS/A] MINKKLIERNNLNSVLNKYREENKKIVFTNGCFDILHRGHVEYLQKARELGDLLILGLNSDDSVKRLKGNDRPINNEIDRAIVLAALECINYISIFDEDTPLELIKIVKPDVLVKGGDYKIENVVGREYSKETVLIDFVDGYSTTNIIKKINS >gi|343386221|ref|AEM21711.1| ADP-L-glycero-D-manno-heptose-6-epimerase, 1227776..1228732 [Brachyspira intermedia PWS/A] MIIVTGGAGFIGSNIVRGLNNLGIDDILIVDNLKNASKHKNLNRIKFKDYIDKEDFTLDYLTSFVNDNKVEAIFHQGACSDTMETDGKYMMKNNYEYTKNILHVCLDKKIRFLYASSASVYGNGENGFEEDEKNEYPLNVYAFSKYQFDRYLNKLFKENKVNSQVVGLRYFNVYGPQENHKGRMASVAFHLFNQIKAGERMKIFEGSEKFLRDFIHIDDVVSVNNFFFANPDKSGIFNCGTGNAESFVEIAKALKEVYKSAEIEYIAFPDALKGKYQKYTQADLNKLRAIGYDKSFMNVNTGVKKYAEVLEKSGGYLM >gi|343386222|ref|AEM21712.1| SCP-like extracellular protein, 1228806..1229252 [Brachyspira intermedia PWS/A] MKKIILITFSVLFLALPLFSQDPEQSAKLLELINEERQKAGLEAYETNEDLQNAAAVRAEEISKVFESKRPDGSEMHTVFSENGIRVAYYGESIRTGYETASGVFKAMIKDQSDSSSILDMDYTHIGIGIYKNAKNTYWAIIYCSLAE >gi|343386223|ref|AEM21713.1| hypothetical protein, 1229336..1229506 [Brachyspira intermedia PWS/A] MIFISCEDDKVEKSIYKVTDKIENSIDKAGDKIEKAGEKAEKALDEAGEKIENIVD >gi|343386224|ref|AEM21714.1| hypothetical protein, complement(1229597..1230532) [Brachyspira intermedia PWS/A] MKKLLITLITLLSILSISCEKKPTEPTNNNNNNANHSQSFTGNFTFGTFGNVSALFINEDGSIYMNIENGLLTIKKEMITKISDSQYTIKGQMPTIKYDTSSATSKSIMFAQNAADMNAVDVSLNLSGKSLSLSGQVNSDNVNANLTEVSGYIPNDYAGVYYIGDGINDYGFEIKSDGTVVNIELQNGNVIYHKGYTDKLIKVSENEYILNINSLENNTPSTGPISFADAEIIVLTEAEKYYNISGKYTLKFENNTMSIIGGGYTVHYKDVDTIGKYIEEVAKDRSYTNQIDYSLFTFKLGSPTTDTFTKK >gi|343386225|ref|AEM21715.1| hypothetical protein, 1230671..1230817 [Brachyspira intermedia PWS/A] MELGAWSLELGAWSLELGAWSLELGAWSLELDILYINVIICQYINKKA >gi|343386226|ref|AEM21716.1| REC, Signal receiver domain protein, complement(1230871..1231260) [Brachyspira intermedia PWS/A] MINGKPLILAVDDEEPIRDLITYTFEPHDFEIVTAENGKSAITILEHNPVDVIITDLLMPSMTGLALIREMKKRKSSIPIIIITAYGNTEMVKEIIAEGVFRLIEKPLDFDTLIPIVHEAIEYKKNQEK >gi|343386227|ref|AEM21717.1| glutamyl-tRNA synthetase, complement(1231279..1232724) [Brachyspira intermedia PWS/A] MSEIRVRFAPSPTGFLHIGNARTALFNWLYAKAIKGKLILRIEDTDQERSTKEAVDMAIKSLKWLGIDWDEGPEVGGDYGPYFQSERLDIYKKYTEKLMEEGKAYYCFCTSEELEKKSNMQRTLNQPIIYDGKCKDIPLEEAKRRVANGEPAKIRFRVPKNQIVTFDDFVRGIVKTNSDEIGDIIIVRENGFPTYNYAVVIDDMLMKISHVIRGEDHISNTPKQILIYEALGAEVPRFAHTSSILGNDRKKLSKRHGAATLMEYKDEGYLPQAMRNFLALLGWTHPEAMETMVDDDMIKAFKLDRFSKSPAIFDTAKLRHLNAWHIKNMNLDEVTELFIPYLVNGGFLKENYTEEEHAWAKKLVSVIRHNCVVLSDIVKYVPVFFENDFELTDEMKEMVNKEESKKLLQFIKNDIENTDEITDEYMKALIKKAQKETGLKGPNLYHPIRYVLTGSSAGSELSHICELLGKKNVLYRLSKYI >gi|343386228|ref|AEM21718.1| guanylate kinase, 1232965..1233516 [Brachyspira intermedia PWS/A] MSNIVVITAPSAAGKTTLIKKYMANHSNAVFSVSYTTRPKRANEVDGQDYYFVDKEKFEQMINDGDFIEWASVHDNYYGTSFKELEKADDEDKILILDIDIQGALYIKSKGIDANYIFITPPSMEILKKRLEDRGTETEESIKLRIWDAKRELEYKDKFDIIIENDDVEEAYKKLEEAINSKL >gi|343386229|ref|AEM21719.1| hypothetical protein, 1233551..1233967 [Brachyspira intermedia PWS/A] MGIIPLEKLIEYKGNRYELSKAMIELAKNGGTLLKGETKYRGGKYIPTVMKNILDGKIKYEYEEGVDMTVDEEAPFKHSEVAYDESEYASEDDSSEEENDTEYAVADTDDADDDFDDDYSEDEEKSKKKKKSSKKKDE >gi|343386230|ref|AEM21720.1| miaA, tR delta(2)-isopentenylpyrophosphate transferase, 1233974..1234900 [Brachyspira intermedia PWS/A] MKNIVFISGATASGKSSFAHKLIDNYFNNAAIISIDSIQVYRYMDIGSAKPSPEEIKKYNYKMVDILEPSVNFNIKEYLDIFKNVINSIDNVPIFGVGGTGFYIDAIKYGIFDEENDNQESSQKIRKELYERIDKYGLESLYSELLNIDKEAAENIDRFNARRVVRALEVYYNTGKKFSELKKLRKPVVNLDYLSYVIDIDRETLYDNINKRVDIMFEKGLLDEVKKIIDMGIDNSYTSMQAIGYKEIYDYLVNESMSLGDTIELIKKRTRNFAKRQLTWFRREEHRRINENDLEKVAEEIKAFYNIN >gi|343386231|ref|AEM21721.1| hypothetical protein, complement(1234922..1235578) [Brachyspira intermedia PWS/A] MNNINKNIEELIKEIENSNNNNPVCNKALKEIKNIFKNLNDNDADNFLKLCAVTVDKLFYLQRYNDIIYIKENIFNIKDKFQNINDILFLYPSAISNLMLGFNDKAIKELEELINNYDIESSQISPLQNFLAEAYLREKKYQEAVNYYEKFIHLNVTNAMMWNDYGYALEHIGRKEDAKNAYSKSLELDPSFIFAKRNLKRLNPKENLFKKIFSSFRL >gi|343386232|ref|AEM21722.1| competence-damaged protein CinA, 1235719..1236198 [Brachyspira intermedia PWS/A] MNYDKAKEVVDLLIQRGLKVTSAESCTGGLFAAHITSVSGSSGCFEGSFVTYSNEIKHRMINVREETLEKYGAVSEECVLEMAENSRKIMKSDIAIAISGIAGPSGGTDDKPVGLVWICLAAEGYIKAYKNIFSGDRQEVREQSVMFSLNLIENFIKKC >gi|343386233|ref|AEM21723.1| flagellar MS-ring protein, 1236427..1238130 [Brachyspira intermedia PWS/A] MQDFINKLTSQIKNIFAKTTTLQKAVLIGILVIGLGAIIATIMLTSRRTGTLLFQQALTQEDARNVIAVLDANNIRYQYRNGFITLNSEADKAKAELELVKEGRMPTGVDGWELFDAPRIGITDVELDINKRRSLTKAITQLLTKLDFVQEATVDLAFPKKEYLTDIDSPVTASVVIKAQPFKEEVLRDPKTVRGLQQLIAMGVDKLKPEFVTITDSTGYVLTDFTDEAANLKLKVAQEELKIVDRERKKIENKIRQTLGRIYTNRVETTIALELIWDDVSITNNLVLPIILKEDDPATPYDDSQFTNKVQVSTRTVTEDWKGQQFIPQGAAGAEENVPPGYKDKSDRWQTYTKTDSQDNYELSKRYEAIKKGSYQIGKISAAVALDGRWTKAYDQNGDPIITNGSSYVREYHPVTAEEIRNVTSLVQAAIGYDLKRGDQVSVTHIQFDHWDRFNAEDAKLMRDRFIRKTLIITMISLLILFVLALGIRAIQKELARRRRLREEELERKQMEMRRQAMMNANEEPISEMSLEDAARKKLMDEVIRVSHERPDDVAQLLRTWMADDKS >gi|343386234|ref|AEM21724.1| flagellar motor switch protein G, 1238187..1239218 [Brachyspira intermedia PWS/A] MPAEKEKDKKQRVLSGRQKVAIFLVSLGMETSSEIFKHLREEEIEQITFDIARLENIESADKDAVFREFQEMMIAQDFITQGGIDYARDLLERSVGSQKASDIINRLTSSLQVRPFDFIRRTDPAHLLNFIQGEHPQTIALILAYLEAQKAASILGALPTEIQPDVAKRIAIMDRTSPEVLREVERVLERKLSTLASEDFTSAGGIDSIVEIINSVDRSTEKSIIESLEEDDPELAEEIKKRMFVFEDIVLLDDRAIQKVLREVDSSDLAKALKSVDTDAQDKVYRNMSKRAAALLKEDMDFMGPVRLKDVEEAQQKIVNIIRKLEEQGDIVVARAGEDEMVV >gi|343386235|ref|AEM21725.1| flagellar assembly protein H, 1239260..1240162 [Brachyspira intermedia PWS/A] MPEKVFKSRSIVELTQKVNIAVPHHKSQEELDYEESQEEYRGPSIEEIEAEIAGLRAQWEEDLRDMRRKAVDEADRIIEDAKTQAFEIFKSKQNEAHVISEQAKVDASRIIQDANAEKERIQSESESIKDAAYKEGYAKGYDEGFEKSFSDSNNDLIKLTEKMKKILAETINKRNEIIDAAEAQVIEVAVLIAKRVVKMLTERDKGIVIRNIQEALRRIKGRTKITIRVNIDDLEVSARHKDEFYQMLDKIEGVTVLEDPNVDVGGCMIETDFGDIDARINTQLNEIETAIKEVEPIKGF >gi|343386236|ref|AEM21726.1| flagellar biosynthesis/type III secretory pathway ATPase, 1240198..1241652 [Brachyspira intermedia PWS/A] MIKDENIDFDKEVKKTFEKYRKVVDDVALLKSYGKVKEVIGSLVISEGPFCKLGDMCRIYMNDDTYLDAEAIGFRNQDVLLATFGPVNGITFGNMVYSFERPLSVMCCDEILGTVLDARGKPLAGGGHNFYETPIPVSHNAVNPMNRPRIKKHIQTGVRAIDGLLTVGQGQRMAIMSGTGVGKSTLLSMIARNTNADVNVIALIGERRREVRDFIERDLGEEGLKRSVLVVATSDDAPLLRVRAAYTATTIAEYFRDKGKNVMFMVDSVTRFALAQREIGLSRGEPPTTRGYTPSVFSELAKLLERTGTSNKGSITAFYNVLVEGDDLDEPITDAVRGILDGHIVLSRDLANRGHFPAIDVNKSISRIMNEVVSNMHKRAAREFLKMSADYNEAKELIMIGGYAKGSMPEVDRAIDYKPMMDRYLQQDVYEVSSFADSKEALLSMFYSQEEIEEDLVNSGDVKKAADRTDISDNVEYANDVVIL >gi|343386237|ref|AEM21727.1| hypothetical protein, 1241684..1242136 [Brachyspira intermedia PWS/A] MKKFDFKLEPLYKLRKNIEKQKQAEVAEVSALYNKERDGKDDCISKINDGIRIVDSMEDNNEMLTMSIYLGEYISALNSQIAIHEDNMAEISVELRKRQEVLQEASRQRRAVELLKEKKLLEYKKLMNKEEQAKLDEWKKEYVSSDAYEY >gi|343386238|ref|AEM21728.1| lytic transglycosylase, 1242157..1242882 [Brachyspira intermedia PWS/A] MIESVQRIHARIGEIQDTFNKLGFAPINTQLPTKPFAEHLNEAMAENNTENKVNNIDGSIVNDTNKKLDNGKVISGDTSSDAFKGNISFGVYDGATNNFAKAINAYKKASVESFPTKYDDIIKEAAEKYSLPENLIKAVIKQESNYVPTAVSNKGAVGLMQIMPQTGVGLGITDKEMLKDPYTNIMAGSRYLSQMLNRYNGRLDLSLSAYNAGPALVDRLQRIPNIEETQNYVKNIIGYIK >gi|343386239|ref|AEM21729.1| NHL repeat containing protein, 1243012..1245162 [Brachyspira intermedia PWS/A] MFTIIKKNITNYKRGFMRIKLLAGIVLFLMTISLSYAFDKTPYYVNTETYDSYRELLRGVHYYNQERYDASIASFRNSLNTNPTDKFIRYWYSKSLYKAGYMSLAINEWLNITRMGYEDPIILSKINKYDSANVNEEKEDTLSNFIYLKAFSTNLNFRKNINQPIQIKVMADGSLYVLDYSDSSLKKFDINGRLIGKIAHGKRLEKQQTSWWKNVLQFVAKVYPYEKLENPRGFDIDSNGYIYIANTKKDKILKYDSNHNYITNIGVTGVSNGQLLGPSAVAVDKEGNIYVSDTGNNRIVVFDVEGNFLYSFGKLGENNGEFFSPAGIAVNDQYIYVADMGNKRIQQFDLSGNYIQTIKHNLFNEPRGLSFARDGNLYIADGSKVFYYDIVESEFTIFNNSERYTVTPTSVAESPNGNIYLTDFMSGRIDVYTRKEEYYANLDVFVDREYLNKFPVVVASVTVRDRAMNPVVGLTPENFFVTENSSVSHKVNFYDAPELHEYRFIYLIEDSLAAKAYESNIKEEISNFTMSLTNNDEVLVIHYNDQVYKADNYDARNLRILENANNFHFTGGISALDDAYYEAIRLSGNSFKKTAIIHFSVTSPDDRVFDMMNFNDVASFAKNNAVSLNQVYIGTNKSNYFLDLMTKNTYGYIIDADHSINYTDELDKMKNINFGRYFIYYNSFKNLAQSGQFRALNVKVQYRDMYGEEEVGYVVP >gi|343386240|ref|AEM21730.1| VacB, Exoribonuclease R, complement(1245309..1247300) [Brachyspira intermedia PWS/A] MKVIKLLKRINKEKELDISEYKNKYVETKKDKLRFDKMLQKSVSMGLVMKKSNTLKLTNEGKIYLERELKQITNKERDILKDRKSKSKNKKNDTGNKKTSIPKPEIKIDVNNAKKDAEIIAKAYNVPTEFPKKCLEEAKLLPDSMENVELEFDRIDLRDIRTVTIDGADSKDFDDAISIEKLNDGYKLGIHIADVSHFVVMGSALDREARKRGNSVYLIDTVYPMFPHELSNGICSLNEGVSRFTMTVFVTIDNQGNVKESTFHKSVIKSSRRLTYDYAQDVLDGIEQDEDWLVELLKNADDVKKILLQKRIDNGSIEFNLNETQIILDKGGNPKDFFIGERKETHKIIEELMLIANCEVAKRLKNIKGSIYRVHDSPDQEKLDTFTRIAFNRGYRVTRDADGNLDFHSFIESIMGKPDEKLLLTLLLRSMKQAIYDVNNIGHFGLGFEYYTHFTSPIRRYTDLLTHRLLKQALEGVNNLKPTMQQFYTNSAQWCSKTERIAVECERSLDKVKAARFMKDKVGNEYNGIVSGVTNFGIFVEIEDRGIEGLIRYAVLKSHYRYDEHEQAAYSEEDAKWYTLGDRIRIVVYKVDVKELFIDFIPASEFDNSFDDRDIIDSRDFLKKKKNKKEIYSRKSHKSSKDRKRGSKDRINRKERKKSKKRR >gi|343386241|ref|AEM21731.1| hypothetical protein, 1248229..1251342 [Brachyspira intermedia PWS/A] MSNNHSKKRYSYTPDSQTYNPFDQLFNSDENTVNSDNNNNRNNNNNRNNNNNRNNNNNRNNNNNRNNNNNRNNNEIYYLSYFLREDKKNNDRDKNKIKKLLIPLLTFIVENKQFKDEKSHLKKDFAVVIRNRFEKLPSEYKDEFIKEDNMLIRQNVLEYKINNAFTEAAVFLRDFRNIMMHKNVKEDTFSRCKFKKFQGDLFTFLILNMKAAFGINDKQKSLLKEKNKEEGIKLSSDKFEIKNEYIKKVLEMNAERMGENFANVPFIYALSILAMFVESKYIKDILDLIKLKKFIEEFILSFSLRGGYKTFVPGISLEDDELYLKQIENEYIVNDEVSTTGRRLKKNLSYFNINDIDVNNDFAVYKKILKFYSYRTSFPKIEEFEDLIREFKAKEIANANKNKIEGIIEFNRNVEEHNAKVEYNKKLIKQPVPSLETDYKNIIPLLTNVFRNEDIFIKEAAEFLSLKYKSQFGNDTWTIAGNTIIWIEPNDDILFDVRRKVKPSKNGLHSIYKIVYSKKNAERYSLNRYNLRALITSILINGGVEFKKLKTTASDNCPPSNNKETNKVNNDRLLIDAIKKKSENWNRYQQASFIIKVIRRSAMKNEELHNRDSVAFFQEFARVLYLLDNRNGNVYDDIIAVMHRYKVNTSNFSDKVKNILKCHTLSEMLNQSFTLFTIPNKEIKNDSDNLLFKTWSKFAFLPYNEKNKEISDILQWNNIKTKYDIKNKNADLFDILSKVFEQEKMTPPHLVDIYNDYIKNNKIDKYRNKEIRNIIAEEMILTYISLQYVNNMNKNRNSYFRLESYEDKTDNSPLKFNLIWELNPIIKIDIKDYMKKDIRSALNWIFDVSRIKEEGKIEGKEDLQKCLTNVIRSYKIITSHDILKNKCPKVSAEIGKDILNADNIKDMVKVLIWAQKELLYFICNMEANIIYTLNKIYTQAEIDELTREDGYFNFGDLVSLHNKNIEQIKYLDNHKNNSALDIRIINVRNMLAHGRLFDKSCELNYKSAISILDDAMKRTLEKSLQDVYLKNNKYNKK >gi|343386242|ref|AEM21732.1| hypothetical protein, complement(1252181..1253062) [Brachyspira intermedia PWS/A] MKNILILFILISYNAFTYNFVSIINDYRIANGKHPIKQNNQLDRALAKMAKMYAHKGYIDYEYISDANLNITDYSIVYTYGFTSSSSLVNFCVHNDNFLNNYDYASVAVYKIENYNYVVAGVFNGINYDDEVNEVYDLITENRNNNGAITKLKRDKNLEKMAMARAKELFEKYSHTRPNGKEFYTIMEDLNIENYWNGNGENIASGYKNAKEVMKAWMESKGHRENILDKRYTSVGVGLYVKNGKAYWVQIFGIDNPKYKDTDTEYQDNNNSTYDSYKNYDEYGDNYKNDSLY >gi|343386243|ref|AEM21733.1| hypothetical protein, 1253325..1253456 [Brachyspira intermedia PWS/A] MEYGYELIYAVEAINEMDQELKKRLKEFIYIAKKILKMILILI >gi|343386244|ref|AEM21734.1| hypothetical protein, 1253597..1256353 [Brachyspira intermedia PWS/A] MKEINSYIEEISKADTQNLPIVYLLAIASENNADSTDLIRINNIVLLENKKLIYLKDLLNLFGNNFINIINDLLTKIDKEKYEIEIVYKEDNKDNKVLKISNLDNEELKKLKEKTRKFIIETIEKSKKDFKDYLFKLENWQENFNKDYFDLPFLYLLIIFRQCISDKDIYMYCINLGLDDNIINFIFADTKIYNIYIDESGKIINNEEFLVGGYFIEDINFRCWNEKARRLFYNILGKYSNNISNKKIIYHRNEIKNKKLKKNITYDVFNFVKINNGKFISICENKVKNNLFSRRYYISLLSELIMYTVRTIIVENKINLIDDKLLLIIKVSSRSYKDQYNSITFKFKDVEKFLTNAIDSKIEVSEILDKWKSDADQYLTRERYIEKLDISPVIYDGIEQVKIKYGLNTKNIDYEILDFEMASMTPDLVIADYFCNFYFNFIKVEELKNLIDIFGYMIYTNIEYNPFNSEIDFDFNMKDYYNILKRVILYKKISSSDKVTKYTREYSKKLVAKIIEYLKTDNHTNKNRYIVGALKSILENIEYQSDFIRNYSDIIDSYNVLIDLAKNNVLTNDKVLNGAIIFAINTGKLYVFNHADDDEKAREVVEDNKNYRDDVLKSVDFIDIVVLFDNISSIVYWYKYNTKYSIKALKQTLSNKNIEIEDYEKARLHGTLGQSYNINYYITNNTNDLINAKDAFIKAINYFNNNNLEIIREYSYLQNVAITAKDENEFLEYTEKYLNLISDDYKNIVELNNKIDTYLSLSNKDKGYEFFVIRLLRYCNTFKITKKSKEIANLLITNHKHFIENNIVSLEDVDIQKEYGLLLYKYNDGEIDTQYLKKCYSFMKGQLGTFNYMRMLSLYLIEILMDNESNIDKALSIIIDLSKITGAGYKIAFKGLHNKASIVNIKEWASNVRDKLYM >gi|343386245|ref|AEM21735.1| hypothetical protein, complement(1256571..1256864) [Brachyspira intermedia PWS/A] MIKNNRSNHMKKIISNIFSLIKSIIIIIILLHIADIFLFGNTLNIPKKGRQIFNKISQYDSKYFMDSVKNIKYHINNNFNKYKSKWENISSGNDKAV >gi|343386246|ref|AEM21736.1| hypothetical protein, complement(1256861..1257229) [Brachyspira intermedia PWS/A] MSIISCTANTKPNIYHSLITIKSESHTRKPMSIYVSKTTENNYELMGIITTDKYSEEYDTGKDSYNISFYLDGGVYDIKFIWYEYKSVYPDPPYKDYKEYILQGKQIEKGINYKIDIDELIK >gi|343386247|ref|AEM21737.1| hypothetical protein, complement(1257290..1258261) [Brachyspira intermedia PWS/A] MQKFYALSILFLMLFVSSLSANVNDYKNYRISIRPFNFDPNYDTYIEEIIESVLTDNGLNVFNRDKNIDKMMLEEQENIKINNPDAQSINKSLITHVVSGNIMKLEDKYICSISIKNINTYEPEKSVTKVLNDLSYNNIVKLSLDLYEKITGQQSHIRVETHQVLHNYKIQNTIPTKKISRIPAMVTGVLFIASGLAGTIYSSVELDSWHREIGGSAANEYYLYKNPNSSLSGVIQYRKLTLYNAWKKGEINTKPDNMPYFTPVGSSIILGTSIAFTIIGLGLFGWSLSDQPYFASNFDIKPTIFDENGCFDLGLQATFICKL >gi|343386248|ref|AEM21738.1| hypothetical protein, complement(1258285..1258638) [Brachyspira intermedia PWS/A] MINELSNHEYKNFVILDKDIKYYRNEEIDYQSYNLNYENVNSFTNKYNAEYIMINKISRSPLNEYFLSSKMINMINGKIYLNKYEKIDNYEEFLTNSNVVLEKITNLAASISAQLKK >gi|343386249|ref|AEM21739.1| hypothetical protein, complement(1258782..1259705) [Brachyspira intermedia PWS/A] MSIKEAKINAYINMADKYFYVGFKADSIFLDKYKSKNINIAYIPFLEENKSLQGYAEIFDIEFIEEKYNKEENKYYVFSIVNKIKLYSILKNRILKNENSINTYNEYLISEEDPFNRFVYLEMMYILSRKNHTYNKQIEYMNFECLELEHKYDDILPKLKEAENKLTFKVSPTGIGISKQIIDVLNYDINQYGFNISSDDNASYVFQINITLKQVEDKDTHRNNYESHFSLYILNNNVTIHTFQFQKIPEDNYIDNFEKAKDLVKYNVEKILREEFSIKLKEFLDNKIKIYNWSINNMKKYLFYLLF >gi|343386250|ref|AEM21740.1| hypothetical protein, complement(1259741..1259854) [Brachyspira intermedia PWS/A] MEEYMRKIIVLKIIFICFCMNALAEIPGSIKKLEKNI >gi|343386251|ref|AEM21741.1| hypothetical protein, complement(1259888..1260259) [Brachyspira intermedia PWS/A] MAIISCAKATNPEKKEISYFAGKYEGSMYFKYPNVIISENYTTVYINESESLTINNKYIHNDYYSTYIRKLALYSFKYTDNNSVYDGKIDILIANNSFTLTMTVSKDNEVLIPIFNVVKYNQI >gi|343386252|ref|AEM21742.1| hypothetical protein, complement(1260321..1260773) [Brachyspira intermedia PWS/A] MFRFLIISMLITSSLFSETLILFPFNGIEHNDNISILEMFNEHISKTDTIKIINPPLMNYDFNSLNMKEYNEIMMNYAIKSNADYVLFGYLSYINETKKLNIKVMNIKNNNIIYSYPWSFEYIERIEYEISQKIYPDIVIKILDDSSMQF >gi|343386253|ref|AEM21743.1| hypothetical protein, complement(1260854..1261363) [Brachyspira intermedia PWS/A] MRKKILYILLVLTVICSSAFAYNNNNKSIVVITFQGPVDIDNVTLSNLFEIELINLEGIKVKSGKGLYNSSYDRGKVSDSKEYYRSLYSSTYENEAIKIAKYLRSDYVLIGQINKLGNKKRLVIRVIDTNRNHIAGAQCTFENPEDIAGWIATMSKRIVDGINNSSKRY >gi|343386254|ref|AEM21744.1| hypothetical protein, complement(1261625..1262119) [Brachyspira intermedia PWS/A] MRKKILYILLVLTVICSSAFAKSNYDSVKSIGIITFQGPDDETNVALSSLFAIKLANSGNFNVISGKGEKSQIESENTYSSLYSSDYENEAIRIAKKLDVSYILLGQINRLGDKNKLMIRVIDVKGNHIAGAQCSFEEYEDIERWIDSMCMKISSDIDSNNSQY >gi|343386255|ref|AEM21745.1| hypothetical protein, complement(1262428..1262844) [Brachyspira intermedia PWS/A] MPINGPVQKDNEILYNLLSIKLSEIPQLKFKSAKNNIIDAYIKNTMNNNSYAKMSTLNYEKFVADNLKHIESSYVLTGDIVPNTKRSVLFIKFLDRNGNLVSGQEFYFENDIMDLVKRIDNISYSISNKMLENYINWY >gi|343386256|ref|AEM21746.1| TPR repeat-containing protein, 1267116..1268162 [Brachyspira intermedia PWS/A] MIDDFYKLANEAFDAGNYEKSIEYYDKLIFYNGDNAEIYNCRGLANNKLGKYKAALKDFNTALKLDNNNADIYYNKGLTEYDMGDYEKAIKDYTKSIKLDNTIGDVYNNRGLCYAALGEFEKSIKDFTCAIKLNKNDAEFYYNRGLAKYNLEDYQNALMDFDKAIEINPKYSNAYNNRGNVKDELNYNEEDIIADYDKSIEIDNNINAYFNKALYYDINENYEKALNLYNKVLEIDEYYIEAYGNRGFVLYKLNKYDEAIKDCNKAIELDSKYWILYLNRAEIKFEFAKKNIDDLKKLNDEAFEDINKSYELALEDEDNLNEFKDYVLELANKNFEAAIKFCKEHKLL >gi|343386257|ref|AEM21747.1| hypothetical protein, 1268159..1269988 [Brachyspira intermedia PWS/A] MNIELLPKWDNYYINNDENSKFQADKTDRPPLTGKNRYVPNGLYDEKWENVYDAYGKADLTPYYIEALTSDDDNDVNFGVYGLYAATTHQGSVYKSSKMAVPYLADLLKFNNNASELACIFLARIALGEKHFINTPFFYKTKYYGTVKKYKNEILDYYNKSKSLEAMRLLCFIGNSLDEILNFSYDECFKLENGNKNDVYIRQASTLLVQGFTAAQHNYKISNKNYYKEYPNISDINDIKKLKVNKHIEEVYNIMNSSESLLVRGSAAICLAYTGIFNKDISNLLLYITENNCAGVDWVWDDNFSNIAKYAWAYSADIETLLNTEGIKTKSNVTGNINSDEKSYDDILIEAVTRVFPHKEKKEELINPELNDIQKRVLRKIVDNAPNLFGSYELETINMPLNTESAKRLIDDDYIKNKILCQIIDSKPLWYIIEESLIKKDEETITDIIINNNIDTMKLLFEIYAPIKNIINREVIVNTLNIYSSFDDKKILNENNSILLSSIANCLTKSIENYKDEIFNYLDETLIKVNDFKDDYDYKEKLVGEYVGVFLLTLGRSKLLDEKYYKLVRPYHKYIQYSVFPSKLFFELLGYTSLEHQELIKKQFNIKNI >gi|343386258|ref|AEM21748.1| hypothetical transmembrane protein, 1270073..1270963 [Brachyspira intermedia PWS/A] MKKFIPILPILSGIFWGGGGIFIRRLMELNINSFTVVSSRVIVASIIFFICVFLYDRSLIKIKLKDLWIFVSAGILGILGLNICYNEAVKQLSLSLSAVLLSLSPIFVLIFANIFFKEKITVKKVICMILALLGCFFASGVLETNETMHWTYFGIFIGFLGAFFYGLYSIFSKLAIIKNYNTLTVTLYALISIAIISLPFTDWKALSNVVVENGSGMLVFMLFHSLCTSVFPYAFFTIALGHMDAGKASILASGEPIAAMFFGIFFYHEIPTVLSVIGVLLTLTALTLLSLPEKNK >gi|343386259|ref|AEM21749.1| Xaa-Pro aminopeptidase, 1271353..1272429 [Brachyspira intermedia PWS/A] MNTNRLNRVINSMKEKDIYQFVITDRMSIYYLTNINIHSGERFLGLYINQDNEVHLINNQLFPLNNKDIDILYYSDTESAVKKLSKFVHKDKNIGIDKVMTSNFLLEMMELDIAKKYINASSCIDYVRMQKDEEEIKKMIKASKINDKSMKDIIDFVRVGMKELDALEELKLIYKRNGADGGFSFTPIIAFAENAANPHYSTGNTVIGDNGCLVIDMGCMHDGYCSDMTRTIFFGDPSDEAKKIYNTVKTANERAIDKVKEGLKFSDIDNEARSYITENGYGEYFTHRTGHCIGMDVHEYGDVSSVHHALLKEGMIFSIEPGIYCADKNTGVRIEDLILVTKDGHKNLNSFTKEMIIK >gi|343386260|ref|AEM21750.1| conserved hypothetical protein, complement(1272826..1273494) [Brachyspira intermedia PWS/A] MKKIIKIIVDIIMTLLFFILMAYHFTGDAIHEYLGFSLFIFFILHHILNFNWYKNLPKGKYNFNRALNTFINTMLFICMAGLMISGILFSQRVLGFLNIHNSGMFTRHLHMISNSWGFIFMSAHLGMHWGMFINMSKKFINIKKQISITIASLIALYGIISFIKRGLYNKMFLLVEFAFFNYEEPVIFFFMDYVSIMGLFIFISYYLQAFNNRKSNLKISSK >gi|343386261|ref|AEM21751.1| flavodoxin, complement(1273903..1274616) [Brachyspira intermedia PWS/A] MKNLIFILLSIIILSSCSNENNPDKIIKTDYIVSNIENSEIENNKTENINYTQSGSKILIAYFTWSDNTVVENPASIDVDAETSASVLSPGNAELIATWIQEETGGDLFSIKTQNKYSSDYDECLNQARKERDNNERPALTDKVNNIDDYDVIFLGFPNWWYTCPMAVFTFVESYDLSGKTIIPFCTHGTGGLSRTIRDLKKLLPDNCKVLDPIGVYRPEVKNSKSKVLDWVRKLDY >gi|343386262|ref|AEM21752.1| flavodoxin, complement(1274721..1275251) [Brachyspira intermedia PWS/A] MSLLISSTLLIGGLNAQSSKTLIVYFSWGGNTRTAANMIKNLTQADIFEVKTVEAYPSSYNDTVNQARKEQNDDFLPKLSANINNLANYDTIILCYPNWWGTIPQAVKQLLLTHDFSGKKIAPLCTHGGSRMGRSVTDITSLCPNSTILEGLSISGGSVNSSENNIKTWLQNINIL >gi|343386263|ref|AEM21753.1| 4-carboxymuconolactone decarboxylase, complement(1275393..1276187) [Brachyspira intermedia PWS/A] MIVFSCIANSQSKGESLTMTEKAKNKYNELLKREASITKTNDADLESIFNNFLYGEVYNHGTLEPKLRELVTLVSLTASQGTDMIKDHVEIALNVGASPIEIKEALYQCSPYVGFPRVFAALEKANEVFKEKNISLPIESQSTVTEQTRFDKGLETQVSIFGDAIHAAHSNAAPNQKHIQNFLSANCFGDFYTRTGLDLKTRELLTFIMLISLGGAEPQATAHANANISMGNTKDMMLEAVTQCLPFIGYPRTLNAITIINNLK >gi|343386264|ref|AEM21754.1| aldo/keto reductase, complement(1276258..1277103) [Brachyspira intermedia PWS/A] MNTIKLNNNVEMPILGFGVYRVEDYEECKKACLYAIEAGYRHIDTASIYLNEKAVGDAIKESGINRKEMFITTKLWIQDADYDKAKKAFQISMEKLGLDYLDLYLIHMPFGNYYAAWKAMEELYEAGYIKAIGCCNFYKDRLIDFVAHSKITPAINQIETHPFFQRWEDQDLMKEYNITLESWGPLAEGKNNIFNNEILKTIGKKYNKTVAQVILRWLTQRNIPIIPKSVNKERIIENSKIFDFTLDDNDMNIIKTLDNNKNIIFLNDDAEFIKQLLKLKY >gi|343386265|ref|AEM21755.1| conserved hypothetical protein, complement(1277131..1277511) [Brachyspira intermedia PWS/A] MNAFTQTTRIKLTFGSNEIYAVITNSKAGNDFLSLLPLSVKAEDFNNTEKIFYLDKKLNIENEPDGINPKAGDITYYAPWGNIAIFYKNFRYSNNLIYLGKFENASDISKLSNMKGDFNIGIEKAN >gi|343386266|ref|AEM21756.1| Cupin 2 conserved barrel domain protein, complement(1277576..1278088) [Brachyspira intermedia PWS/A] MKNILLILFVLITAISCNSNNTNNTAYKYNAAPTNTVLIKNGEGQKSKGSSDYFTGDVEVETITSPNETSKFSVAYVTFQAGARSAWHTHPCGQHLIVIEGIGLTQEEGKPIQEFRAGDTLYCPSNIKHWHGASYDSPMKHIAITGDSNGNNVTWMEHVTDEEYYSYTNQ >gi|343386267|ref|AEM21757.1| regulatory protein, MerR, complement(1278197..1278523) [Brachyspira intermedia PWS/A] MTISEVSELTGLSKDTLRYYEKIGIIPEISRNKSGIRIYNDYNLQCIKFSKSMRDLGISLDSIIKYIKLYKKGKNTLNERRSILINERDIMQRHINEMKMKLEILNKN >gi|343386268|ref|AEM21758.1| transcriptional regulator, LysR family, 1278676..1279563 [Brachyspira intermedia PWS/A] MDIKSLTYFLTAAREGSITKAANSLNLTQPNLSRQISNLEKEIGKKLFIRSNYSIKLTSDGVLLKKRAEEIIDMIEKTRMEFKSSDDVIAGDIYIGSAETYYMKLIADVIKSLRESHPNIIYHIHSGAYSEITEKLDKGLLDFGVLIGNIDSSKYDYIDIPYKEVYGLLMRKDSHLSKNKFIEKNDLFDIPIMCPKIFFNNKIQTSKFSEWIGNDFDKLNIILSYNLIYNAALMVEDGIGYALTIDKLVNTTNTSDLCFIKLNPRLEIELRVVWKKNQVFSEASKIFLEELKNKL >gi|343386269|ref|AEM21759.1| Multimeric flavodoxin WrbA, 1280365..1280904 [Brachyspira intermedia PWS/A] MSKKVLIISSSPRRGGNSDTLCDEFLKGAKEAGHNAEKIFLKDKNIGYCEDCGTCYKNNKPCVQKDDMKDILDKMLEADVIVMATPVYFYTMNAQMKTFIDRCVTKYLEIKNKDFYFIATAATENKDEMLRTIDGFRGFLDCLEDVREKGFILAHSVWNKGEINDKEFMKEAYNMGLNV >gi|343386270|ref|AEM21760.1| NorM, Na+-driven multidrug efflux pump, 1281002..1282324 [Brachyspira intermedia PWS/A] MFSNKYLIKLFVPLIIEVFLEYLVGLIDSIMVASVGESAVSAVFLVDFVIAFLISIFAAVATGGAVASGQHIGANNIEKADDSINQLIRFLLLFSVFITLIIYLFKDAIFSALFGSITDEVRNEANTYMLIVAASIPFLAIYNGGASMFRTIGNSKISMKIMISMNILNVIGNALLIYVFKMGIAGAAISTLISRIGSALIIIILGLNKNNLIYIKNKIMYKMDLNTIKRILSVGIPYGIENGMFYLGRLLILSLISTFGTASIAANSVSTLIASLEVLPGMAIGLGLTTIISQCVGANDYNQTKYYTKKIIAIIYVSQTITSAIMLAILPIILNIYHLSAEATGYTYKLSWYHAIMMIIWPLGYSLPVVFRASGDAKFPMIVASVSMVLCRIVLAYVFALYFKMGMVGTWIAMFVDWIVKAIIFTFRYLSGKWIKFQYS >gi|343386271|ref|AEM21761.1| maltose O-acetyltransferase, complement(1282655..1283209) [Brachyspira intermedia PWS/A] MNIKEFLKDYSSGKSIDMFSEEFINIANKMQETEKLLWQYNNTFQSYKNNKDILNKIFEANIDESVIIMPNFHVDIGNIEFGKNIFINKNCTIMDIGGVIIEDNVQIAHNVSIITPNHDFNNRNILIPKRIVINKNVWIGTGAIILPGVTIGENSIVAAGAVVNKDVESNTIVGGNPAKVIKRL >gi|343386272|ref|AEM21762.1| acriflavin resistance protein, complement(1283316..1286495) [Brachyspira intermedia PWS/A] MKNLIYFFANNRMLVNIIIFVSIMIGLYSYYNIDKESFPSTDLELMILQVVYPGASPLDVEQNAVIQIEDQLRTISGIDEFTSIITENAAIIFVQLDMEIDTSKAKDEIFRKMQSVPDMAPEVQTIEITDINPKLTPIYNIGVHFKKGYNGDEKVLYDFSKELERQLKYVDGVADIRVQGRTDPEIKILADPKKLQEYYISLTDIVNSLSARNIRATSGDLKKPIYMDLEENEEEKTIVTMGQFENPTEATNVVVRSTFNGQRVRIQDLAKVDSGFVEKSIYVRINSVEGYSLSILKKENADIVKTTENINAFLKNNQNLIPENIEVTTMGETSRMVLALTNVATSNLIFGFIIILVVLLIFLDFKSALFTSIGMIVVIFITFSYIHFSDLTFNIISLAGIITVIGMVVDNSIVVCENIYDFQKVGKTGLEGTVEAVKDVVSPIMVATMTTVVAFMPMLLTKDVVGKLIAPFPKVVVVALIASLFQAIFLLPNNLQDKTKKNSKLNFLRKIKNPLDFDKEKLFNAMKNPFNKALKILLKFRYLVVLFFIILLIFSFFLAKDSLKKFILIYDTSSDSIMINIDSGIGNSIKNTMKYVEQIENAIYKSVDPKDLIAVNSVVGKQVNQNIVDISEESANLAGITVYLIPSTERKKTAYDIMDDINAELEKTSLRQELDALMVSVKLPMDPGKAVDIKIVGNDINQTRKVRDEVKAYLLSLNGVINYYDDDKIGKDELRVLFDYDEIAQLGMNVANVANELRTAYSGTVATSIQELDYKLDFRVQLNRDYIYDTNVLNNLVIPNTYNRLLYLKNVAKIVETNGVSAIRHYNGQRCITINADLVQGQNTSIQVMFAIQNKFKDISQRYPGVIIGFGGEADQTVGALDGLTVTLFIAIVLIYLILLLQFKKFAQPLMIMFLIPFTLTGVFIAFYVHGMPMSFIGFIGIVGLCGVLVNDGIIMIDLINKIIESGKTNPDALDNPKKFAFDSIVEGATQRLLPIFLTTVTTVGGLMPTVYGIGGDADLIVPIVMSLAYGLIFSTLITLIFLPCVFMIAVDLKLIKLK >gi|343386273|ref|AEM21763.1| regulatory protein TetR family, 1286807..1287394 [Brachyspira intermedia PWS/A] MKSSSNKNNARVKKTKKLLEDSLGLLLEEKPFEDIRVIDICAKANMHRSTFYTYYNDKYELLKSKLDEYEAKFLEDLKRYKIENKLKDSHVDIMERILQYFYLNRKYLKIIFQNNKDGSVTSILREYLASYVIEGIKDFKTIRPNKDNVIRVMVSFYSGAFISVLTDWIVNDCFISVEELASYISDIIMQRVFSE >gi|343386274|ref|AEM21764.1| hypothetical protein, 1287527..1288057 [Brachyspira intermedia PWS/A] MKKIILFILLFVFSFNFLNAQNITKDSDYSKNWSSFIFRKTIDMRGALYEGRPGGDLELVSGNNPLHLVKIYKFIGARSDTHAYYNHQVPISMFYDNAPALGLNLVEGYSIEGGKIMRYSKYIKSYQGKLDSWKKANSTFTNERWVANSDADWSSYPVPQPEDVNWAEGEYAGELY >gi|343386275|ref|AEM21765.1| hypothetical protein, 1288038..1288544 [Brachyspira intermedia PWS/A] MQESYIKKYNVVYFYYISYIISFNGFIFITNKTVISYDNAWIKLVKNRIVKEADRDYLFKENGDLIINKKKRLNFIQAKHENMAVYSNTDYLNKFMLVFSGYPSIKVTFMEGYIVENNKLYYTYAYKPSYYTKLNKWMKFNGVFEDKENWIAKKTLNGVHFLVLNHQI >gi|343386276|ref|AEM21766.1| anti-sigma factor antagonist, 1288707..1289039 [Brachyspira intermedia PWS/A] MSLNIEDKGKVKVVSLVGKLDVNLSVSIEAELEQLVESGSINLILELSGIEYLSSSGIRVFISIMRKIKDKNGRLVLACVPDIIKKILKTVELEDLFEVYESVDEAVESF >gi|343386277|ref|AEM21767.1| hypothetical protein, 1289180..1296112 [Brachyspira intermedia PWS/A] MFACASSQKNTDYAFESRPFLKEYKRYSLTSGEVNPALDAVIDREGTWIYYSRENAGNTDVFAVDSYTLETYRLTRSPGIDTSVSVDDKSKYIVFSSTRDDAFGDIYLFKLYNLGIRTSKNNLENLEQSIVRLTDYKGYDTDPVVSHKGNSIAFISDRDGGVKKLFTVKPNGKDVQKLSDIEASSPAFSFDDTKIAFITSKVGERYSQLVLLDLNSDTNSQTNLTILTDTETFKFNPTFYNDDTIIFFEIEKDSDKDGNLTYYDKRRLMSYSLATHQYYVLSEDTQLTTFNVAYPSALVGAYVVSEDGTSIVTMGSTKEYFIKDDNSSTMYNSFVELPYNRKVDVIDRFAEYFPFSEDQNNVAKAYFNMMISSYTNNNIKEYNNTKKVLISEYPDTFPGFLTSKIDENFDTNNNWFDIESYTNEYFLTNNDLEMTNLIAWSGYISANEKYKVNKNNEDTFAILSEILNLNINKDLYLLIAKLYAHSVEDSGYIYPDDDDIYNNPYKRKDLLFSDRLEIAKDFIKDSKISYDTIIENAHPYAPLAVATRLIYLDGLILSRNFDDATNLFKPYVESKNDIMLALGYYANAKVLMAQKDDGAYALFKEALSSGGKNFDSTYEAQYCKDTLADYYKSLADKAYNEGKYAAAYDNYNETLKYNPNDTSASSRVIESGLRAYSTIESLEETIFERERNILSTRYSSHEAHAELANAYYYLANRYYGIAVSKQYSPERYVVSEKKREDGFYLYLNKAFDTIVEKATSYINFAIFLYPDEENYYVKKAEMLTFAQALRMQVLQDEKISKSVIELVPAYKDNAITNGQYMGYNMLAFQTQNLDSEIIDSLIMAKSKVRTKPNVVSIMLANSYLINGRYSDAVNEYKEAESLLNQAGSDKSKAWYHFFYGYSLWMNNDIKGAYREYEKARALFEKLGDKESVYKIVGYTSVAAIEQEDYEKAIDSLLERDKLTKDDVNKNELNQLLLAACYLKLEDYNNALAYCDSVKAQIDSLDSSVYTPNYVSITLYGANINVVNLGLASFGGYIPGEPLNVDKQQMLYSIYQELYEKMGRYSEAREALSSYRNYIIQDKPKKSIQPLMLATYYNNEGYLYYRQGDQSNSIMSFKTSIEEYQKTLDKKTLENNPSLQYQNAENDAKNYLSLSSLYLRYLSENDLTSIKREFFIELFNTTKTLQILSTNNVVSTKDRLLLYSHIAAFNYIMAFKLTADNSVNYRKKQSDDPTDMRDHDVNVQRLSMLKDAIDRYKYILSSNSNFPVDLKTEIIIRYNLAKAYELAGYIEEAAREYMSAFSKAQTSAFAVEEIAILTTLIDFSSKYRNRYPDSLDYPVQYVFRILKRLRESVFMITFVEDNNFILRQAKYKVIEFLQDSYPDASINILAMFDAIDMRRKFLDRRLYTLGENNYYLREYYKLYEKALYSYQMYLNSVATPYDSKMEAAMLKEISKFEKEAIEKFSNTPIEPIVICDVKPEDIDKSMRKDETLIWDTYLGYRFIRENGKTKFYMQTNAMPKTKNYVTHIGFRPIVISNKNIFVRELYDSTEYMLPAKTAYIDSKLIAFFRTTRNAQKEINNSMTMASNTNATNNVYSYNNLQNDNELNNNLYMNVSYNPEETNSMSSNDMSTNMTSTNTVSTNRRRRGNFRFIELKDIITNSYVPLVTDITGASASDISNIMKKNLYIVYCDNETFTNNRRVIRNINNIALVVGKGGKDSRVMFYTNYFRKLSSNSLEVSMKGYDNNMFTVYGKPDYNVSSLSNAAYEFKTRLYNSYSASASPSMTMMSNVIAYSQSDNEKMLNYARIVEDRYEVRDTNTAYLFSEEGYKFFASSYTNISDSNAYRFIKAMLPVYRRMGEEGAVKGANRALHFMYLYTNNNYDLIDEYFTPRTLSRFLKAKDDPKESVRYLNYIANRVDGENKDKILEVAVLYDLIYANTPIDTVTNFLNRMQNTNEVLTVANTIMNKDATNENDIFTTMNYIYGNQYIFETETVADFANRFYSLYKTNSAYIYGLLNKIRVPESNFDNNIKDAYEIFSNENTNTMFIFYAYEDNKYAAYSYVIGDSEVKKAVLIDRDKLNTYLNSFTNVAKPRDRRNSLKSIQSAMLSSDIIKDAERVKTIYITGSAANLFTVPFAYLEAFQNNDVIKIREFQYSPLSILDVGKPSIKLNTETNFYTSLESLAVKSFDNANGKIPLMHYIGIDTNRNKPYDDMDIFLSPARNNDINRYLKARNDTKLLFTYTTNASGDYYTVMKYLYNNFDKGIIDSYRYIKTYRVPVNAINPNDRDTLYMANYALFDYILPGIPKNYVDK >gi|343386278|ref|AEM21768.1| hypothetical protein, 1296266..1296955 [Brachyspira intermedia PWS/A] MQFSTVFADFNGGIGIYIPLGASISQSYQEHKLGVNSSDGKLTTDAAFEWGIGITPGIYNGFDNYMGFSIALDLAYHRDVYAFNESKAAGTTGQYQNVKTTYYFDTLNIGILPKFNIYNFFIGIGAGVKIPLAGGESTKNYNATYNQFETSNAYYTLNDIKNKYQMSVIPYLKLTLDYLFFFSDETALGLGLYVGYDFGPGRVNDSRFNKNDYGAVDIGGQFSFYFVDN >gi|343386279|ref|AEM21769.1| Hydrolase of the alpha/beta superfamily, complement(1297009..1297941) [Brachyspira intermedia PWS/A] MQYILYIILSIIILLLIILTIISNHFVNKLLIKTNKKLFERKESNKEESEEKKRIKEERRKWFESSQKDVYTISSDNLKLHAHLINNNSNVYVIIVHPYEARGSYMKYFIEKFYNMGFNVLAIDLRTHGESEGKIYSLGYLERLDVLAWIKYINDNYNDSQIILYGISMGANAVMMCCNEDNTNNVKAIIEDAGFTNAYEQLKRRLDMAYKFSFLPIVEATSLMSKIRLGFSFKNIDVKKRVAMSKIPILFIHGDKDELVDYNMVNKLYDACSSEKEKLIIKDGHHISAVFSNEDLYWNTIKNFIGKYIS >gi|343386280|ref|AEM21770.1| zinc transporter ZupT, complement(1298014..1298820) [Brachyspira intermedia PWS/A] MIENYSPVSLALFGGGITFAFTALGSALVFFFMSEIKPKLLATMYGFAAGVMTAASFWSLLAPSIELSENTNLPNWLIPVAGFLLGAFFIWVLDKVMPHMHIVNGHEETEGTKVQLSKSILLFLAITLHNIPEGLAVGVTFGAFSVGDSGVTFNAALALALGIGLQNFPEGAAVSLPLKTTGVSKLKSFSLGAISGIVEPIAAVIGALAVTKLTIILPIALAFSAGAMMYVVIEELVPEAVAEEHNHFGVFGFIFGFAIMMVLDVALG >gi|343386281|ref|AEM21771.1| Protein Kinase C, 1299023..1299373 [Brachyspira intermedia PWS/A] MSNYNEDKYFDKDCIFCKIIKGEIPSQFIKENEYCVVFKDLNPKAKVHLLVVPKPHVKNILETDEFIMNKVLETIKEVAKEQGLESFRIMNNCGAGAGQTVFHVHFHILSGDNLEE >gi|343386282|ref|AEM21772.1| TatD protein, 1299405..1300217 [Brachyspira intermedia PWS/A] MIDSHCHLTYISKKSKELEEVLERANKAGIFYFVDIGVHPDDIDERMFILSDAEGVFFSMGYYPDYANENDEDTLKAFELKIKNLNKKTLEKRNKSIYAVGEIGLDYYHNEDNKNEQKAFFRALCEAAKNVDLPILIHSRDAFKDTFKVLRDADLPKRGIFHCFSGNVEDAKNALDLGYILSFSGSSTYMKNDFIRDAVKYVPKDMFTIETDAPYLTPQKVRGRANEPSFIPYTVEVLAEVRGESSEDIMRTALENAVRVLELPIDLNRI >gi|343386283|ref|AEM21773.1| flavodoxin, complement(1300286..1300804) [Brachyspira intermedia PWS/A] MKYSIVYTSKSGNTEKLALAIKEAANGECLQCVKPDAVDNAKVNDSDIVFVGAGSYKGTCDEAAGKFMQTLKNKKVFLFMTVGYGDNQAYYDKMLNPAKTFLDASNNLIGTYACQGQWIDGQKKNLENMLEKAASEDEKKVVQAKLANYDNAMGHPNADDLNKLKEVVKSIN >gi|343386284|ref|AEM21774.1| 50S ribosomal protein L9, 1301012..1301527 [Brachyspira intermedia PWS/A] MEVILKKDFISLGYEGDICKVKDGYARNYLIPRNIAVVKNAANLRTLAQMQKSLEKKRAKRKMEAEILKGKIVDITVVIPMKVAENGKLYGSVSQQTIVDALKEKEIDINKRDVHMEKHIKELGDFEVEIKLYHSVNANIKIKVVNVDENPAAEEVKEENNAAVETASAEA >gi|343386285|ref|AEM21775.1| DNA helicase, DnaB type, 1301566..1302966 [Brachyspira intermedia PWS/A] MNNTPCSIEAEESLLGAMLQNSQAVSVAISKIKSTDFYSERNRMLYESILEMHNRGIAINAETTLRYLKENGLFEKIIQNDEAYLIRIIDGTPFHQNAKYYAEIIAEKSLLRDLITVSQDIQKSAYEAKDAETKDIADFAEKKIFEVTQRRLDNDFIHIRDLLYEALTTIESRKKHKGTVTGVPSGFIALDKVTHGFQPSDLIILAARPSVGKTSFSLNIIEHVITNIETSNFGIGFFSLEMSRMQLVERLIASKARISLSRIRSGDLEKQEWTKLGQTFNSLSQANLLIDDSSQLTIMEIRGKARQMKYKFAEMSKTTGKEIDLKLIVVDYLQLIHSGSNARRNGTREQEIADISRGLKALAKELNVPVISLAQLSRAVEQRQDKPRLSDLRESGSIEQDADIVMFLHRQKPNKEGKDDEVIDEKTNQVEVILAKHRNGAIHDGIPLHFIADQTRFENIYNSSES >gi|343386286|ref|AEM21776.1| Ttg2B, ABC-type transport system, permease component, 1302987..1303793 [Brachyspira intermedia PWS/A] MELFDMKIELRKGVKNKVVGFLATLGEFAALIMEVFKYTFRPTFSFKLLKEQIIRMGVDSFIVAAVTVLCTGMVMSLQIAVVLDSVLKGISQFVGSMVGKAMVKELSPMLLALIFAGRVGSSVTAEIGTMQVSEQLDALKTLYTNPIEYVAVPRFWAAVISLPMLTVSADVIGVLGGAIVTVFVLHSDPMHYFDRAISVISMGDFIGSLIKSTIFGAEVMIISCFYGFRTSGGAEGVGKATTISVVYSFMIILITDYILVSILGMFGM >gi|343386287|ref|AEM21777.1| UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase, complement(1303999..1305384) [Brachyspira intermedia PWS/A] MKKFNTLIKNYKVSKESQLTKECLNTEIKGIAYNSRLIKKNYLFVAIKGLKDDGHKYIESAINNKASIIIYDNTADKEFIKQLQDNHKDVHFVAVKNPRECLAYISAKFFDEPTKKINTIGITGTNGKTTTTYLLKSVLEANKNKTTLIGTIKNMIGKTEIKTNLTTPESIDLESIFDKSLKKGVSHIVMESSSQALAMNRCDYLNYDTAIFTNITEDHLDYHGDMQTYLKAKLKLFSLLKESSKKKKLAIVNIDTDNFKQISNHIKKLGIKMVTYGINEKADYYGKVISLNSKNTEYEFYAKGKFISKVKLSMLGRFNILNSLSILAYVCENKLNIEKSIKAMRKVQVAGRFEIVTKEKHPFIVAVDYSHTPDSLENILVEAKKLNPNRVIAVFGCGGDRDRKKRPIMAEIAEKYSDIAILTTDNQRTEDINQIMSDIEKGFKNNNYKKLLIEKKLYLKQ >gi|343386288|ref|AEM21778.1| hypothetical protein, 1305515..1305862 [Brachyspira intermedia PWS/A] MKKYVFLLVFLISAMTNLLYSAEEQWMVAPYKDEHACTVAINKYSSYEFYVIELSSEIANNIGKLNKELKGQFSELNPSNNKTYTIIYKVPKDNDKYILLIAFGVPAGKIGVPVN >gi|343386289|ref|AEM21779.1| glycogen/starch synthase, ADP-glucose type, 1305917..1307413 [Brachyspira intermedia PWS/A] MNIFMVSSEAYPFSKTGGLGDIAGSLPLELSSIRLGSSKINASLVIPLYKQNYKLISKKDIIAEFEIEHGKEKIKVEAARIKHPENNNVNIYFIKQDNFFKRNGLYSENGIDYPDNASRFILFSKAVIKLIIHLYKEENFKLDIVHIHDWQTALIALYIKEVYNDEEALKKLKVMFTIHNLAYQGNFSSDIYTLLNVSWKFFVHSRLEFYGNVSFIKAGIILSDIVTTVSPSYAKEIQGEEFGCGMNSLLEGISQKLYGVLNGIHYEAWNPATDKLIKNNYDINSVEKKKLIRNALYKELGFANKNYPLVTMISRFDPQKGLDLIYSAFFEISTYDANFIFLFSKNNYFKDFENEFTKRAGRAKNIKILFTFDESLAHRLTAGSDIYLMPSRFEPCGLNQIYSMKYGSIPIVHAVGGLKDTVINYSGNKSVNKATGFTFNEYSVKSFVDTMDLAFDLYYNKKDVWDKLIFNAMSKDYSLHKTVLEYTKLYKKLLNTEK >gi|343386290|ref|AEM21780.1| nucleotide-binding protein, 1307500..1307997 [Brachyspira intermedia PWS/A] MAKDPSFDIVSEVDMQVIDDCVNVAVKEIDNRFDFKGQNIQIELNKGEKTITILAPADFVLNQVRDILFQKFIKRGLNQKCLREKKKEKAAGDAIREINEIVHGIDKDLAKQIVKDIKDMKLKVQASIQDEQIRVSGAKKDDLQAVITMIKGKDYPIPLQFTNYR >gi|343386291|ref|AEM21781.1| LexA repressor, complement(1308058..1308684) [Brachyspira intermedia PWS/A] MTELTDKQRDIFNFLQKFTNENGYPPTVKEIMVHFNFASPTAVTTHLTALEKKGYVKKTGKRARGSVPIDTSGKGNHNMIKIPLLANEVKAGLLMDVADETVEETYSLPKSIAQDESNFLMKVIGDSMINAHIKEGDMVLVHPSNEADNGDIVVAKIDDNGNEEITIKRFFREKDCIKLVSENNNYPPIEKESVSIVGKVIGLIRLKI >gi|343386292|ref|AEM21782.1| hypothetical protein, 1309066..1310949 [Brachyspira intermedia PWS/A] MIAIIKNCIIILEGYIMKKNFINKNKKFYFLLLLLIFIIVLIMSCKKVNLLGPNNIPPPTKFPIIDDEKPEIPDYPDPTPVPDPPDEGDIEEKPIEVKPEVVQNGTVFGGYGRRFKFKNDWYVLATNEYEYNPETKILRQLNKGAVLRIEKDGKTITKIHSINSGDLEQTEYWTNLNSKKLVITDTEVNIPIKAESQGWATNWEYKIPDDVPNNISDHYDVITSNKTKMDYEKFAYIEKLIIYYSNRSSSDLLNWNKVSSSNVFDFPKVDFNNPNFQGRCGNATRNHIIYFKGKIFVFRTVFNVYDKLLTFYRDPSEGDFILCTDEYYTIEWGKDMSDAKNWVTNHIRNGLYSDHYNIWYDKNKLYVYIRSGGKFSYSDRWQLWIPYPYSYKSGLYTTEDGINWKEEPYDIIDKYKPTPADISLGYDKFSDDIINATNQMLGYEMQDGTPFEPSYTELNGKYYRTFNSTYPMPPIKKIMETVDRFETNFTVTEEHVKKSGYYQLQVSSVPPDKAQESDWVNVVPNNELASSIGWESGGADLFTFNNKIVRLVDYDRQFKLNTQYETALNLSEKYYNLLLNSPMSEFKKYDYYFLYYKVMADMLKIIKDKGNDYFRPDEAVTHYTFEL >gi|343386293|ref|AEM21783.1| purine-binding chemotaxis protein, 1311075..1311554 [Brachyspira intermedia PWS/A] MSSAISNQILVFKINNELYGIDILKVQEILNFMQPSPIPNCPDYLKGIINLRGTIILVIDLRARFHFDEPMNPENCVIVVVAIGDKKYGLVVDSVSDVLTINNENIQEDIDMHVGIDSRYIMGLVKANEQMIILVDIDKVFIKDELDDLTNAVNNSIVK >gi|343386294|ref|AEM21784.1| ribosome-binding factor A, 1311575..1311943 [Brachyspira intermedia PWS/A] MSSHRILRVNENIKQTLSMIIMREIEDPRIKNNLVTITKVDTAKDLKNAKVYFVCLHEDKQNEVLNGLNSAKGVIFSYLKKQLTIRYVPNLTFHYDKNLIETNKVLTDIKNLDIPEEIPEEN >gi|343386295|ref|AEM21785.1| phosphoesterase, RecJ domain protein, 1311978..1312973 [Brachyspira intermedia PWS/A] MENNKLNVSKKEIIDRLSKADNVTITGHRNPDCDCICSGLALSLIIKNILGKNAQVVNTDKMQRDLQNLLFVDKVIFEVNENTLPKKDVLVVLDSGDIDRIGWISEILNDYNEVIFIDHHKVRNIKGVTMFYDDTTAGATCEIIVDIFQDYLEKFDSNIATLLYCGICTDTGSFIFSNTTDRTLLYGSQLMKVGIIQENLGNVVRKRYTKNDVAALMEIYRSMVIDDKNKIGYLCLGDTICGTNMKELAVSASDTLIQMDDVLIGFIIHENEDSFRVSMRSRCPKNIREVAETFGGGGHPKASGFTVYKKDYTRENLIKEINDKLINLLAS >gi|343386296|ref|AEM21786.1| ribonuclease H, 1313009..1313500 [Brachyspira intermedia PWS/A] MTKDNIIIYTDGGCRGNPGLGAWAAILISERHNLRLEIGESEDNTTNNRMEMKAAIKALERLKHSHNIKLHSDSAYLVNGMTKWIYSWQKNNWVKSDKKPVENKEYWLKLIELSKKHNIEFIKVKGHSTNKENNRADEIVNILMDEHTEKGKSASFNEKTEYC >gi|343386297|ref|AEM21787.1| ABC-type dipeptide/oligopeptide/nickel transport system, permease component, 1314015..1315010 [Brachyspira intermedia PWS/A] MFIILMFMSSAIFNTVSEKTLKAQIEENINAEVRGLSNMRTEDVENFIKERRAYYYDIYWLNRSIGERIFIRGINTITFQFGKSSIMMDSNGNRDVIKIIGEALPRSIILFTTASVIQMMIGLIIGLIKARKAGGLFDRSTSIITMIVYGMPTWWLSMILIMIFVYKFKLFPSGGVHSIPTPTGIMYYLDMLWHMSLPLLTLTLIGFWGLSFVVRNIVLSTLQEDYIMAATARGISEKSVLLGHTLRSSAPPIVTITLLGLLGSIAGSIIFEGIFSWPGLGNLYWISVQQNDIPVLMGNLAITTALYQLGLVILDISYGFLDPRIKVGGKM >gi|343386298|ref|AEM21788.1| ABC-type dipeptide/oligopeptide/nickel transport system, permease component, 1315010..1316428 [Brachyspira intermedia PWS/A] MENNINKNNIKKKLAPLIEFFDEFKKDKTGVVGLCILVLAIMVSLLEPLLLTYKEAPKRWRDITYWQDNPASAAPEWLNFFQKEKSAITTDINPISVETNYIDGELNYKAVFEYNYKFDKAPVDLIFHANVNGSTGLIWNVTRPDGAVITLSDSLHNINGDLRISSFNDSKNRIFRFYRESVPRILARQIDTLTTNPMKILFNTKKDDMAKNFQALKGIYKFEVSGKFSEDNASFEDPYMVLVGSMSGIMGTDNMKRDIFSGLVSGLKWALFIGIATSFISVIIGVMYGIVSAYFGGFVDNTMQFIYQIFIGIPVLPVMIVMSAIFKPSIWTMITMMIFFSWTGSVMTVRSMAMQLKEETYIEAARTIGAGHFRIIFNHLAPLLLPFSFASMALAVPSAIVYESSLSLLGLGDASIVTWGQILHDAMKGSAVLSGLWWWIIPPGILIAILGMSFAFLGFALDKILHPKLRSR >gi|343386299|ref|AEM21789.1| hypothetical protein, 1316447..1316914 [Brachyspira intermedia PWS/A] MHIIKSLSLIFSILLFISCSDNKNNNEKFDIVPVDSTKSFAVLGYCVPAPEHAMNVKYAIVNKTIAESNFDYNNISYYYRASKNLNDLLSFFDNFKEERKNIDEETNIEITIQTNDKKEYIAYWNVNGIYYSLYSDEKNGIDDLALILMRNKALN >gi|343386300|ref|AEM21790.1| hypothetical protein, complement(1316916..1317587) [Brachyspira intermedia PWS/A] MILENLYYTDYYKNHWNKYSILFSDKYFESENKTILNDDYYIIHKKYSGYIHQKDIIGYERSLYTNHDNKLIYNYRSDDARMFKIINHNNNEYFVFNRDLSGFSIIDLNKTNKEFNFYHNKPINKNGIIVFMDAEYCNNKILFYIFYLSKAENGAFKRVFNYLLYDFSNGINSSQNYVNFIDVRKSVLDLYDYELYFTYKAYFDNNSIIAEDLSNGKKFNINL >gi|343386301|ref|AEM21791.1| conserved hypothetical protein, complement(1317850..1319667) [Brachyspira intermedia PWS/A] MNKIIVIISLIILLATSCQTLNIIIPNDVRKILAKNIDEDRSQNPLYREFRAAWISSVVNIDWPLKGGSESEQKKLIIKHLDTLYENNFNALFIQVKPDAGVIFKSEINPATRYFLGSASSDEKDDYPFETDMLEFIIEEAHKRNLEVHAWFNPYRMSLTYDKTKSYEEQFSKKNFIHTYVSNNLEPIYWYDNRLYLDPGEPISAKYITDSVIEVLENYDVDGIHFDDYFYQNAARGKTYKDWPDEVSAEKYGAKRGYDITNKSDDDYGMNGLYAWRRDNINRLVSDLYREIKSRKPYVKWTISPAGVWRNKDKLAEYPGSKYGSETRSYNPNFDALHADVLLWMLNGEKTTTLNNATRKDGLNRMYIDAIIPQVYWTSEHKTAPFDKIVKWWVDEAKKSNNGKLADIYIGHALYRMGSATNIEPWHDIDLMSRQINYIRDVGKGYIKGSAFFTMHNMYRKDRDTGNFGNDAIEYVRENNYIFKAIVPTMNTMKDISKAPLKLENPSIKKVFGGIEITFTDPNEYKLDKYGHPLPSYSSYYAIYRETIGESGIELIDKIRRTDFNTNAKVIYKDKRVNSKQTYIYYVTALDRIHNESAYLTIIND >gi|343386302|ref|AEM21792.1| hypothetical protein, 1319633..1319770 [Brachyspira intermedia PWS/A] MIKDIITMILFIIFIFIIDKCFRDYIFNDNNSQYMKKAFDYVYKY >gi|343386303|ref|AEM21793.1| aminoglycoside N(6')-acetyltransferase, 1319754..1320272 [Brachyspira intermedia PWS/A] MFINIKENIKYAKDISMMMTEAFNSFYSSYDTIELINKSFISLGYIENNILIGYTGLLEMYSNITCELHPLIIKSEYRNMGIGSKLLNEIEREAKSKNVLNIMLGSDDEDFRTNLHQFDFNNTDMSYILNNIKNINNHPYEFYQKNGYKIAGIFPDANGKGKPDIWLWKQLV >gi|343386304|ref|AEM21794.1| hypothetical protein, 1320318..1321028 [Brachyspira intermedia PWS/A] MLSDIFIDIRKNKKEWLKSKEGDEFEDRFEASLKRHGFNRRMSSDKEIKNILSSIKNDILDKSSDKVIDNVYALEDKSMENCFICQPYGSQNFPDFLIFTAKKIIAIEIKYSSNKSSSPMWNSNLPKSNAIYIFGSYGRGDVTFFIGDDVLPMNERNELIKFFEEIKKLEDNFKNKMKKESRNNLFAYKFDRGFNVYVRRAYEQNKTINENAKIDYFLHEDRIKCENNVIEFCNSL >gi|343386305|ref|AEM21795.1| Modification methylase, 1321044..1322270 [Brachyspira intermedia PWS/A] MQEEYTKESFDYLKNTDIEKRKRLGQYFTPKTIRDLLLKELVSISEKKDNVKILDPACGSGEFLLSCNEYFKSPILYGFDIDESLVAISKKLINNADIKCLDTLKLDTKQSIKYDYVIGNPPYFEFKPDKELKKKHNDIISGRVNIFSIFIKLGLELLEDDGYLAYVVPPSMNNGAFFSKLREYIMNISSVEYLHIVDGSDNFYMANQKVMLLILKKTNNHKNKKYIFSKNDITIFTEDKTFLNKAYKDTISLKEIGYEVKTGSIAWNKYKENLTDDKNNSIPLIYSSNIVDGKILIPNKRKLQYIRNIPKEFIIKNNVIAVNRVTGSHKNINIKSAIVKEKEFVCENHVNVIYPLSNYNKDYSLEYIYNALNDKDNIKVLSLITGNTQVSKTELERLLPIKKIIDKV >gi|343386306|ref|AEM21796.1| conserved hypothetical protein, 1322277..1322789 [Brachyspira intermedia PWS/A] MKYKPKYKFGLLDYIKDENINLSDIDTSDIIDMSYLFENSKRKNFDGIENWNVSNVTDMKCMFKNAEYFNADLSKWNVHKVIDMSEMFSNTKYFNCDLTSWNIDNLKYFEDIFENADSFKHTKTVLKFYNKCKSRNYKKKLQLMLETLDIKELYRELKNDKVNYKKIKIS >gi|343386307|ref|AEM21797.1| hypothetical protein, 1322900..1323877 [Brachyspira intermedia PWS/A] MENHFVKNISFENFKCFKKLEFDGFKRVNLIGGQNNVGKTSFMEGVNLSVYSEDALKLHTNIRQMIKSRQNDDIDIDFFYNDENVINIKTNNKNVKIIYIKDPSKENRMITTPYFNLIVGYSEFELDIYDFCNDKIIIKDDYHFIHSFKADEEYIASLYGQLTNLGKEDYIDNSLKIFDENIIGIRQIFNNNKVTLKLKLKYREKPVLLSSFGEGINRYIAIICAIWSSKDGYLFIDEIENGIHYTNYPKLWKLIFEISNEANCQVFAATHSKECIEAFNKENKDNDGLYLEFYRNQKTGLINIKDRDNEQLEYALLNNGEFRGE >gi|343386308|ref|AEM21798.1| hypothetical protein, 1323870..1324151 [Brachyspira intermedia PWS/A] MNNLIIVESKNDKSFIERLIEYYNCVNINVQCICEFECLEGINNLDKKLEEIRLDKYDRIGIIVDADKEGIDKRIEFINKALKKYVMMWNLHQ >gi|343386309|ref|AEM21799.1| hypothetical protein, 1324133..1324507 [Brachyspira intermedia PWS/A] MEFTSINKLEKSSKLDVDFACYIMNVNGYGELETVLKSIKKSDSVFADCLESWRECLKVHNKDISDKDFDKFYINNYIRFDTCNKYEQKQSSKYCSFESAMKKDIWDLDNNILNDLKEFLKLLM >gi|343386310|ref|AEM21800.1| ankyrin repeat-containing protein, complement(1324518..1325798) [Brachyspira intermedia PWS/A] MKKLIIITLFINIISLYALTENENKMINAVKTGDIRTIQTLLSQNVNPNIKDERGYSLIHIAAENNQTVAINVLKNSPYTDLNILLDNNTKITNNNQYIDGSYYSAMDIATINKNFESVKLLIDSGANINFQMKEKPRSEFLASEYANPQILELYLNKNIYLLMNSEDVISLIKSASIGNNVENINYLVKNLGIDVDTKDTNTMLHYAVGHGSIEAADELIKLGADIDNTNANFKTSLHYIIENNSNRLTESVNLLLSKKANPNIKDKNGNTALHLAVMNAHKSKKEYIEVINALIKNNANLNILNDKNQLALNIAVINNDTEISNILINAKSELNNMYNGSAPIHTAVKNNNIAITDSLLSNGVDVDIKDSKGYSPLAIAVENNNLEMCRKLIRNNAAVDSKAIDIAKKMNNKEIKKLLGLEYIN >gi|343386311|ref|AEM21801.1| HDIG domain protein, 1325978..1326550 [Brachyspira intermedia PWS/A] MASIERDKAVELFKKYNDEHSLFKHALSVEAVMRYFAKKNGEDEDEWGMVGLLHDMDYEKYPDEHCIKVKEILEAEGLPDSFIRAIQSHGYGLCTDIEPLSNMEKTLYAVDELSGFITACALVRPSKSLDDMEVKSVKKKLKDKAFAAKVDRTVINKGAEMLGINIDELIKETIEALIPVQESIGLKKIS >gi|343386312|ref|AEM21802.1| bifunctional pyrazinamidase/nicotinamidase, 1326566..1327207 [Brachyspira intermedia PWS/A] MSKIKILTIVDMQNDYMEGGPMAVKGATKLVPVINDLIKNGEYDAIIATQDWHPSNHISFASTHEKEPFSKIKVIDQDTGDEEILTLWPRHCVARTYGSAIVDGLRKKRDYIYVQKGVDPDDEGNSGFSYMHKEFIDAARENKETLVLDFVGVALDYCVFFTARDTAEYVASIDAEYLVSVNVLEYASAAVNPESIEGLYTSCPLINLKKVRL >gi|343386313|ref|AEM21803.1| methylated DNA-protein cysteine methyltransferase, 1327204..1327740 [Brachyspira intermedia PWS/A] MKIIRLEKKSNFNKAYIYKSHIGDLILKADETFQYITSLEFNLTNIKISLYDEEPSIIKKAKKELDDYFSNSLKKFSIPLAVYGTDFQYNVWMETSKIPFGKVVTYSDIARNISDKKGSISRAVGTAEGKNKIAIIIPCHRVVGVNKKLTGYAGGLDKKEYLLKHEGFDIVNSKIIMK >gi|343386314|ref|AEM21804.1| Ribosomal-protein-S5-alanine acetyltransferase, 1327807..1328304 [Brachyspira intermedia PWS/A] MASEIVDFYRRNKDFFKDFDPKRPDVFYNVNTHKDIIKREIEEIKLERMLKFWIYKIEDKRKIIGMVNFSNIYKGVFLSTTVGYKLDEFEQHKGYMTEALKAAIIIVFKELKLHRVEANIMPHNKPSLELAKRLGFEYEGLAKKYLKINGKWEDHVHMTIINDEL >gi|343386315|ref|AEM21805.1| hypothetical protein, 1328469..1328759 [Brachyspira intermedia PWS/A] MSVKCVWCGKNVEEIQGQATMDTCDECEDFFEEHIDDIAESLNELLKKNESSSSKPTEKKAWVSYSLITAIHMLSSKPYIEFKDSKYKDLISGDKK >gi|343386316|ref|AEM21806.1| hypothetical protein, 1328756..1329073 [Brachyspira intermedia PWS/A] MRTLYIITLIFFCFTASLRPKVQENFYCEYCGNKFSSVKLLTSQNCMRYPEGNYKGKHKLYEGTEKDEYTCKYCGNQYKTIKQLTSSKCMRHPNGNYKGYHSPAL >gi|343386317|ref|AEM21807.1| hypothetical protein, 1329132..1329509 [Brachyspira intermedia PWS/A] MSNNENNYNNKEEKVFEPEIVNNDEPYKNKSLNSILSWIPFILALIYTISPVDFIPDVIPIAGWGEDAMFLIVSALHGIQNTVLDKDTSIYKIIKYIKWVSLILTIIFILILVLLIVLVFKVSYN >gi|343386318|ref|AEM21808.1| chromosomal replication initiation protein, 1329598..1330989 [Brachyspira intermedia PWS/A] MEEINKYWNEFLDIISEDDEFAGVALLKGSVIVADDENKADIVCSGDFTAAHIKKDFLGRIKDFFEDKLGHDIDLDVKVDAELVDKYLNVEEIEESVDNSNNIENTSNKNVLDVSKKENAYGKSNLNDYFRFDNFIQGNNNRYVFEAAKYVSSNPGKEYNPLYIYGSVGIGKTHLLQAIGNSYMQSNPNAKVLYIDGSGFRDEYVSGLQNKKPEIFKKRYKSLDMLLLDDLQLLESAQETSKELFEIFQALDNASKQMVFVSDKPPKELRNIEARLKNRFEKSLILSIEPPQYETRLAIIERKLFDLHTSIDEEVMKYMAENITTDVRKIEGAIRAYLSVRDLMKITPDIEQCEKLDIFKDYFTNKPKLKNATIKEIKKIVADYYGVEISSFESKDRTKFISKARHVAIYLACEYSKKSVTEIGLDFNRDHASVIHARDKVKDELKTGSHLYSEINDIMAGIS >gi|343386319|ref|AEM21809.1| Protein grpE (HSP-70 cofactor), 1331558..1332163 [Brachyspira intermedia PWS/A] MEEEIKENSEEKEEANTEAEAVENNEQLEENAENNNEEDEITALKKRIEELENESADMKNKYMYAMAEAENIRKRTAKEKTDSIKRANKGLLLSLLTFMDNFERALKAGEQDSNVQGSEYYKGIELIHKQFIDFMHDNGVTEIESLGEEFDPNVHEALTMIEVPDIDKEKVVEVYAKGYKLNDELLRTAKVVVGKPAAAKE >gi|343386320|ref|AEM21810.1| hypothetical protein, 1332185..1332394 [Brachyspira intermedia PWS/A] MAHIQLFRAYYEPKADKKESIQHINRVLQDLSDAINNHIKDKEVINVDLTTSHLGNGHTEYVVSVLTKD >gi|343386321|ref|AEM21811.1| molecular chaperone DnaK, 1332541..1334412 [Brachyspira intermedia PWS/A] MEGGKPVVITNAEGNRTTPSVVAFTNKGEVLVGQPAKNQMVTNPENTIFSIKRFMGNTYAEVTEERSRMPYTVIEDGGKVKIKTLEGNFTPQEISARILQKMKQTAEEYLGETVTDAIITVPAYFNDSQRQSTKDAGRIAGLNVLRIINEPTAAALAYGMEKKKDEKIAVYDLGGGTFDISILELADGVFEVKSTNGDTHLGGDDFDQAIIDWLIDEFKKDTGVDLNNDKMALQRLKEAAEKAKKEVSSSLQTDINLPYLTADASGPKHLNVSLSRAKFEDLVRDLVEKTRIPCEKALKDAGLSTSDIDEVILVGGSTRVPLVQETVKNIFGKEPNKSVNPDEAVAMGAAVQGGIIKGDVKDVLLLDVTPLSLGIETEGSVMTVLINRNTTIPTNKKQVFSTAADNQSSVTIRVLQGERKMANDNRELGRFDLVGIPPAPRGVPQIEVSFDIDANGIVHVTAKDLGTGKEQKITIASSSGLSEDEINKMVQDAEKHAEEDKKKKEEVEAKNNADHMIYQTEKLLKENGDKLQPSDKSEIESKMSALKSAVDSNNTDSIKRATDDLQAAWSKASEALYKQAGAQQQAQPDAGQQAQQNNSQDSGRKDDGVVDADYEVVDDNDKK >gi|343386322|ref|AEM21812.1| hypothetical protein, 1334694..1335446 [Brachyspira intermedia PWS/A] MKKDVELIEVIKKNDFERVKLLVSKGADINIKNRYGNTPLNTASGFGYFEIVKYLIEHNAENTDALIMASMNGHEKIVKYLIEQGADVDIQDERGETALMNASQNGHYNVVKCLIDNGAKIDIKDNGYQTALMYAANNGYLEIVKYLIDKGADINNENRDGDTALVYASENGHFEVVKYLIEKGSDVVKYSSALWYASKNCHIKIVKLLIDSGADINEEYGYDKRYTVLSYALKEGNTEIVELLKANGAK >gi|343386323|ref|AEM21813.1| hypothetical protein, 1335582..1336274 [Brachyspira intermedia PWS/A] MKNKIIAFIKRKNESIHTTETIYIASILTMVGGFVDAYTYITRGGVFAYAQTGNIIFFAMGLVRKQFKDTLHYFISIVIFVVGIFFALYIKKILNKRKIIEFEYVIILINSILMFIVGILPETFSDTIIVGSISFMSAIFMITFNKVEGLSYVTNMCTGNLRSASENLFKFLFDKDKTGLKKSLMYITILCSFALGAFLGTLFTNMIGIRAIWVASGLLLVVESLMFFEK >gi|343386324|ref|AEM21814.1| putative chaperone protein DnaJ, 1336317..1336607 [Brachyspira intermedia PWS/A] MDKDYYKILDVNIFASNEKIKKSYRELAMKYHPDRTPGDENAHNMFVDINEAYEILSDKEKRMEYNISYLASNKYVVGGLAIAGLGVGLLLGRRKK >gi|343386325|ref|AEM21815.1| chaperone protein dnaJ, 1336697..1337827 [Brachyspira intermedia PWS/A] MAEKRDYYEVLGVAKTATNDEIKKAYRKLAMQYHPDRNPGNKEAEDKFKEATEAYEILSDEKKRAQYDQFGFQGVHSDFADAYGRGGFDFSSMFGGGGGFGDLDDIFSSFFGGGFSGRGSRSQRRGNDIRHDVTLSLEDAVFGKKMEIKLDKNDTCDVCHGTGAEPGTKTQTCPTCGGSGEVRMAQGFFSVRRTCSRCNGSGSIVTTPCKNCKGSGTVKKTKTISVNIPKGIDDNTQLRVSGEGEAIGGGIAGDLYLYIHVSPHPYFVRDGIDLITEVGINIAQAALGADIYIQTLDKKKVKIKIPAGTNSGQIFKLKGSGATHINRSGRGDLFVVVNIDVSSKLSAEEKRLFNELKKVMPSNDEPTLRKPNKTNW >gi|343386326|ref|AEM21816.1| hypothetical protein, complement(1337881..1338963) [Brachyspira intermedia PWS/A] MKEIIVLISNASNIKDKSNQFMLNMVEHFYKSSIRITVFSKSFPKNFPAYIARKHLSLLFFKKSAKDIANIAENADAIIAIDFPMNIIASMAKNILIKKRVNKLPVIVWYTLNFQNHLYFQEKKDSKTKLIDKRLMKLDYEHTDNIDIIICGSKKTKDRLLYLHKDIKNIEIIQPYFSPYIFINNNAKKEKDKSIIIFYNKEDSIFKCTAAYAQYLKESDDIYKLKIIGYDKELKENIHKLAIEQYVEFIDEDDNTQIGKEIETANCMIIHNIKDSFYTQLIAAWHYKTLPIIDAKSSSAEIASDDKNALIYDSKNPISIISKIKKMTENKKSYELFMSSIEEMQNTDEILQLISNFNHN >gi|343386327|ref|AEM21817.1| TPR domain-containing protein, 1339117..1341786 [Brachyspira intermedia PWS/A] MSDRNANITLESINANTNKTALSENTQYDLNKELDKVKKLMQDGNFFEAIDLCNSLETNYNNYYEIYYLRGLSYYRRADLYYASLDLKKLLSLYIEEKDYDTVYRLTYEFFDAINEYEETLRSCITAYKTTNNPYWLFLAGNSALKNGDVKSADYYFNACVKENSSYANEGFGDISYLNNQYDNAIDNYRKVRYSNNEDKIRIQTKISNTVVKKEIYAWDRSFSSQNYTNAMNILNNISSYSKDYPEITVALAKTYFALEDYNNAKSILLKLISSVKDFDEAYAILAQIYLYEKNETEAIKIIERGLEYTYNKPRLYETFASMLYDLGYSYYPDRIISQILNLYNISDENKIDYSKSLIRQKRYDEASELLKSVESYKDIANSLLNNIEYNKILDKAELLKQKKYYVDIMQLLSKYKFEGNEEQLRIGYIADAYNNLGSIDEAINILKENFNANTISVNNVFLLRKLLGIRASNNDTSAYQKERDAIDIRATEYWEEELKLHLNLVTDRVFEFIKFNQFDEALAYISDLRNKNYDVAYIKQIESTTYGLYAAYWYKNKRYEEATKTAALAVRRNRSNYDAVAVQNEMYIDSYLSSIGDYDNISAYVSLSSTMKEVLRISPAYIDNRIKLAEAYIYEYNIEGFNIINGITDYINVNGGKDLLLGRAYNRAYLYEYSLLSYNRALKYLNVNPIYVSESAVNIKNYNPSSEELKKLITENANNPDKLYAASKIYTKIGNYTEALNIINNALSFDANNINYLYQRAYIKELMGNTKDALFDYESIIKMKKNYAAANYRAALVYLNNLKNDTNSETYALNYLALVPDDYSGYKLLGDIYKFRAERYIDGNTKNLLKEALNNYQTALSKAVWGRDLEARNIILKEINYIQNKLIE >gi|343386328|ref|AEM21818.1| pyridoxamine kinase, complement(1342173..1342988) [Brachyspira intermedia PWS/A] MIMNNNFNVLLLNDLCSYGKASLTVNIPVLSHFGIKVSPLVSVILSNHTAFESFCAFDLTEQLEKIVEELKIRKPTFDAFYVGWIASGKQPSIVVDIIKHFNIGTVLIDPILGDNGKLYPSMSDEHVNAMKELIKYANIATPNITELAILLGKDPAIKYNEEEVKEMARKLSEMGPKTVIVTSVSKDENIGCLCYKDNNIITSYYPKINISIPGTGDAFGSSLLGYILKGDSIETALKKSTKFIYDCVETSIKDNDDRVYGIAIEKRLNLL >gi|343386329|ref|AEM21819.1| hypothetical protein, complement(1342985..1343209) [Brachyspira intermedia PWS/A] MRRGKKNPFQKEVERKFGTSGFELNSFLSGGKKMKVTKEEIEDRYDITLEQFAYFAQISGYKVLADSKALIIFK >gi|343386330|ref|AEM21820.1| hypothetical protein, complement(1343496..1344515) [Brachyspira intermedia PWS/A] MYLYNLGEKMIKKFFLIASIIIFAISCSNNSANKEQAITNPSEISNFLKQYNGRYYHEHEFTNGSYTHVVFRVENGNMYIGEDEDPVTNLSLLNNSLELNVNGNTQLSNTYNQIYSILEVNFFDDHIKFSGKNIFDKEDFNIPDEDYIVIKQFKDLGIYAGNYYIPTLDDKGNIKTKNYTILIDKSGNIYGYKGMTNVGMTFTLEGNVLKSEHNNNGDKIIMSYKLEQDRIVYQINFIYGSEYSYELMKSDLFSPYIGTYSADNITLQVNENNASINTATTGNYHSSIINGNNLVISEILFENDTDPIEIKEHKIVFSDDKTKVTYTKPDGTTVELTKQ >gi|343386331|ref|AEM21821.1| hypothetical protein, complement(1344565..1345632) [Brachyspira intermedia PWS/A] MFISLLILNCSATITNPSPKKETEIGDGSFIDPTPTPDPEPKPDPKPEEVIITDQAQIAEYIKNHNGVYYSRYEDDSLGVRYIIDADKIYNGYGTEVISTMKTLLGNKLQIYIEGKKSGSSANLGYEMNDEMYTFNFGSDGNIYLFANAIFHRENYQKPTTGYETKIGEPIQELITYSGNYYYYDYDDTKKYYILIDQIGQTYIDENLKINYSKTELSNNVLIISYTKTGGTSIREELHFYDKEGNKDYKLIFGNTWINNQLQYETLIKHNLFSTYNGVYKSADGTTTLTVTTTDAQITGVRYSYAPVVTGNTLTIYQYSSKEGTKEHKFVFSDDKMKATYTKPDGTTVELNKQQ >gi|343386332|ref|AEM21822.1| cation transport ATPase, 1346222..1348858 [Brachyspira intermedia PWS/A] MDSFLGSKDDILKTLNVDPKVGLTEDGRKKSLEKYGANSFTKEKGATLIQKILESLKEPMILMLIFAGIIAIGVNTVAYFNGGHADFLECLGIFLAISLSITITIVMEGKSAKAFEALNSINEDIRVKVIRDGNIEIINQKDLLVGDIAFIETGNKLPADGRLLESVSLNIDESALTGESEPVEKDSEALLSDTKTPVAERINMAYSGSFVTTGNGKMIVTSVGDATEFGKIARELSKTKKTSTPLQEKLAQLGKRIAMFGITAAVIVFIIQVVNFIRTGNASFDTISEAFITSIVLIVASVPEGLPTIVAVSLSINIIKMARQNALVKKMVACETIGSVNVICSDKTGTLTENKMTLNKLFANGEYIEPENIKNEKIIKNFAINSTADVDYKDGIAKFLGNPTECALLVAASKSGFNYKEIREKSKIIYEYPFSSDTKNMTTVAKVENETIVFTKGSPEKIMAMCSISDDEKKGIEKAIEQFQNEAKRVIAFAHKVVDDSVENVREKLESDMIYDGFVAISDPVRKEVYDAVDQCRSAGINIKMLTGDNIVTATAIARELKILNENSIVLEAKDIDAMDDNTLKQNLSKISVIARSTPTVKMRVVNAIKEMGNVVAVTGDGINDAPAIKNADVGVAMGITGTEVSKEASDIVLLDDSFATIVKAVQWGRGIYDNFQRFIQFQLTVNLASVVVVLISTLTGLKSPFSAIQLLWINIIMDGPPAIALGLEPIRDNLMKRMPTKRNASIVTKKMIFKIVFSATVMIVLFMLQSKLNILKVADAEKSTVLFAMFVMFQIFNSFNSRELGFDSVFKYFLNNKLMLLSMGVTFILQILATQYAGGFFNTVPLSANTWLKIVGVSFIVILAAEIFKIFARIVKR >gi|343386333|ref|AEM21823.1| TPR domain-containing protein, 1348957..1350360 [Brachyspira intermedia PWS/A] MDNIAIIVFVCVFITLLLIVKKFLFGKSLDKISDIDKVNKLISEGKHDVALIKLKEILAKDKPGTKRAEIHAMIGDCYANLEEYSFAIVEYRHAIDDGYKNPETILALARSLNKIDKKAEALAQYLTLFKIDDYKLVVALEIGIIYYENRQYETAIKYFDEALDVQPNNSEALKYKAFCFVNMGNFNDAISGMNNIYKKFPDDPLLNYNLGRAYRGREDYKTAIRYYANSYKDKEYSVKSLYEMGLCYIKLENIESAIKTLEKAISYDSYDKELNLAILYTLSECYDIVGNINKSMEILESIIVIDPNYKDANEKLNNYKDSRYSENIKKFFRLEGDAFIDMALKVVSSIGLIPYSSKITDKKYLIVFAKETNSPHSPKKIVYFRTSYSPIFNDELVHLYDYAVNANIANTMLITCAMVSPDAIRYAAMSRIDIVGIKRLENLLDKAQLTNLPVGVTRTEEKLNWIL >gi|343386334|ref|AEM21824.1| Ribosomal RNA methyltransferase RrmJ/FtsJ, 1350518..1350952 [Brachyspira intermedia PWS/A] MKKVQDFYFKKAKEENYKARSVFKLEEAQNKFKFIKASDTVLDVGCSPGSFSQYMLNKILKSGSVVGVDILPNSFAHQRFTFILGDIKEMDITTFNNTLFDVVVSDAMPNTTSDRETNHFRSIALCRAIFNLAKDVLKENGNFL >gi|343386335|ref|AEM21825.1| putative positive regulator of sigma E, RseC/MucC, 1351046..1351540 [Brachyspira intermedia PWS/A] MKAEKYFYFAKTLKSYDNIKGIIMKREFALVLETYDNNVAKVELQRSASCDGCTICNSGKPVVLRAFNKINANKGDSVVIEVEELKKGTNFFVYVIPLICLIAGYFIGEYISKLSNIENNLGPIFAFIVFFIYVILGLIKLKKDNKIIANIICKNQVIENFNEK >gi|343386336|ref|AEM21826.1| hypothetical protein, 1351549..1352052 [Brachyspira intermedia PWS/A] MKKIIPTIITIVVASIITYLLISKDRPYEELYTIGNDAVSSVNKVTGLKVHPKVDDIEEGDIKILNFYDVDDVLSYSVKYANYLWKNEGYYITTNYYFGKQPDGKIELAKNSSENGRVIRINVECNTNNSFTVILSLLNGSLIMRNTNEMNTNNINTNELNAVNTNN >gi|343386337|ref|AEM21827.1| putative glycoside hydrolase, family 57, complement(1352124..1354421) [Brachyspira intermedia PWS/A] MRYLILHGHFYQPPRENPFLGEIQKEASAAPAHDWNERITNECYSPNAYSRILDGYGRINDMSNNYEYMSFNFGPTLLDYIARTREDLLKRIIEADKKSIERVGYGNAIAQVYNHIILPLAKKEDMRVQIKWGLYNFEKYFGRKSSGIWLSETAINLDVVDALYDCGVKFTILSPYQAHYVKNITTTDVSGAKIDTSKPYWLYGHNGKRVAVFFYDAYVSQAIAFEHLLTSSDKLAEKIRNAYGERKLVNIATDGESYGHHEPFADMCLARYFKENVHYDNITPTNYEHYLNIHPPTEEVILHSGTGGRGTSWSCSHGVERWRSNCGCGGWDGCDLSWRGPLREAFDILRKMQDKLFATFLDFTDETRNSLREEYVRAIYNDLDARDLYEICSKYISFKEFVFLMESYKYSLFSYTSCGWFFEDVSRLEPIKNMQYAEQSFHYARLLVKDKNVDFVDKAQEEFLKTLEKSISNKPEHHSARYFYEKEAKVDVFAKLYVINYFIFNLIASEYRDVNINIFKHEIKSTKIEKNIIEGILIDNIAADIYFRVNTSSENHEFKNQIQISENYDDLDKCTVYTMYLKDLNSDIRDKLADSLFETDIKKLDHLMHEIYPEYRKLFTYFNLNSITPDYDYRRIMGAMASPILREKITERGRDAYDEVSENLKDARNAGIFISNSGISSLIGDNIKNALNTLYETGNTETIYDVLKDVKFLSNNDMPIDRNTFENIFYKIILKYKNTDIKFNDDEKASFKELGYWLNFNMDNI >gi|343386338|ref|AEM21828.1| hypothetical protein, 1354655..1356130 [Brachyspira intermedia PWS/A] MTLSTFTYAVDKKYIPNNVDSVFSINAGTMAEKGEINLQDIFNRFFMQQYADRYLEYRDDAFVAEVMTNKLNDYIDFSKTSRIVFFNGYQQMTLMFDVKDITELDKLMIKMASQEDKLVSVAENAAYRYLPLDEYNLISWNKEIFSVTLKLKDNYWYNEELNKEDITNIANYVFINNTPLEDEKFLALENETNDSYVWVNLSLLADENSDFAKFLFGRSYEGIPKEAYKDAIITTKINFNNGDAQVLLDSYTPNYPYDSLLLKKELADNIYSFVNGENNYGFLSLAFNSKELSGYLKNIMGDMKNLPFKEELKALEENGIDASKFIELFGGDIFVSVWDDPNADTDESPALLISASITDTDTVKVILQAFAEDVTDDVYTLGGHLCYIKDSILYISDNSNVIDSIINDQKPATVLSADKVEIAKNNTMALYLEFNSNLSLYGIGDEYTETFESVYLTSNILESNHTQMLLKVNTRDKEKNSLSIIKSFLGL >gi|343386339|ref|AEM21829.1| hemolysin protein, 1356142..1356864 [Brachyspira intermedia PWS/A] MRLDEYVHGEGYTESRAKAQDIILAGCVFVNGVKVTSKAYKIKDTDNIEVVQNIKYVSRAGEKLEKAFLEFGISVENKICLDIGASTGGFTDCLLKYGAKKVYALDVGHNQLVYKLRNDDRVVSIEDFNAKDIKREMFNGEIPSIVVSDVSFISISKIAPIIFKELNDLEFWVTLIKPQFEAERGDVSKGGIIRDDTLREKILNNAISRIVEIGFKEVNRTVSPIKGAKGNIEYLAHFVI >gi|343386340|ref|AEM21830.1| putative cAMP-binding protein, complement(1356861..1358063) [Brachyspira intermedia PWS/A] MLNYNTIKFNKSATIFIEGQEPKYTFYIIKKGRVVVYSYFADNYAVEYKEGEIIGLFNAVLNEPYFSTVKALEDTEVIEMNINEIEKIDTISLINKIYDYLMINIERWLNRYYYFLHKENNPYYSRHGKSKNIDIMEMCKIYLNNGFNDAAYKLYKKYIELNPNDEERKEELNNLYKNLKPIEEPENIEANIYKYKKGYCLYTELQSKDNLYIIKYGKVGVYNIFDSKQVTRRVLATDDVLNGYAPISKNNKYLSTTAIVLEDSIVQLIKKEDAMNLVQSDRTLRLYFVKMMSMRVYSTISRIRSFNANKIVSKFVIIIEALIKTELLFKSINKIKFQYNINDICSMIGVEYKESIDNEILKIKSLDISDEGYLMVNDVESFYKEYEIYKQRNTHKIETD >gi|343386341|ref|AEM21831.1| putative cAMP-binding protein, complement(1358114..1359271) [Brachyspira intermedia PWS/A] MNNYNTIKFPKSSFIYEEGNFPKDSFYIITKGKAKCYAINSNNYNKEYNVGHIIGLVNLAASEPYSVTMEATEDVEVLELTLSDISNITNNDLIKTIYNYLNTTLETWLSRYYIILVKNKVDLYYKENIFTMAEIYLKNDFPDIAHKLYENYIETLEDKNDIEYAKKELLKLPPANNPSTFTSNILLYKKGSCLYTEFKPSNHLYIILSGRIGIYNVINGKLLLKDIYKKNYVLDGYEPKLEYKPLLTSAVALETSYIKVVTKEEFIEMIIKDKHLRSYHIKMMSIKVINILSKIKALEETNTLSKLFIIISALLKTETLFEEINTTVLNYTIYDIENSIKLDINDILNNLKKIKSLEIINDKYIRITNINDFFKEYHEYQKNTY >gi|343386342|ref|AEM21832.1| hypothetical protein, complement(1359309..1360463) [Brachyspira intermedia PWS/A] MSYNITERFDKSSILFNNGESPKDYFYIITKGRAVSYNSFYENYKISLKEGSIIGLISAIIKEPYYVTTEALDDIEVLKININNIVQITNKELVSRVSNYLSYILETWLSKYYSLVIKNKVDLYNKEDILIMASIYKNNNFIDASYKICIQYIELCKNECNTEKVEQFLKYLKPKKEPELIEKNTYKVKKGYCLYTEIVSSNHVYIIKSGRVGIYNIINKKQTVRLIYPEGYIINGYPPSLEYKPLQTTAIAIEDSVIEILKKEELISAANKNEELRIGLILVTAVKVNNVTLKIKAVKEKELKNKLIIILYSIIKIETLFKKEKIIKLPYKIKDIIDMIDLNNDIKAIYAEFENIKHIELDTFKNIIVNNTESFLEEYENYIR >gi|343386343|ref|AEM21833.1| hypothetical protein, complement(1360531..1361688) [Brachyspira intermedia PWS/A] MEQQYNKITIKKSTIIFKYKEPAKDYFYIILKGKVTAYNVFYQNYDIHYKEGDIIGLISSIINEPYYSTIESNEDTEVLKIYVQDLAKIDNYKLIDKISNYLSSIFETWLSKYYSLITNNKVNLYNKEDIVTMANIYKNRGFTDASYKICNGCIKLFKDDIHINEAKKLIINTRPIAKPTRIEENVYSIKKGYCLYTEIEPSSYIYMIRSGKVGIYSIIDSKAVVRSIYSSNYIINYYKPVLDYKPLFTTAIVLEDSVIEIIEKDLMENIINRDNKFINNYIKATAAKINNTILKIKALSAKELNEKLIILIYSFIKMDTLFEKNKNVRLYYSIDDIKNILNIDTPNNEIFQILEQLKHMRIDKSENITINNYENFFREYENYII >gi|343386344|ref|AEM21834.1| hypothetical protein, complement(1361734..1362888) [Brachyspira intermedia PWS/A] MKKYRLVKYKKGDIILKDSQISKDCFYIITKGSIRSYNNFYNNTYKMGNIIGLIASIAKEPYYSTVEAIEDTELWEIKIENINKINNKHLINKISNYLSFVLEIWLSKYYSLIIKNKIDLYNKEDILTMASIYKDNGFIDASYKLCLSYINMFENDYNVNNIDDVKKFMKTLIKSKEPEHIDNNSYKMYKGYCIYTELEATNHIYYIRSGRIGIYNIADSSYITRTIYPAHFVIDDYAPTLEYKTLFTTAIVLEDSIVEILTKEELVKKLHDNAELRFKMIKMTSMKVISTILKIKSINKTELRDKLIVLIYGILKIETLFSEKTYIKLYYKIEDIKNMMHDDIDINDMQNALKNIEYLEFDCFNNIIVTDSYKYFKEYESYTK >gi|343386345|ref|AEM21835.1| cAMP-binding protein, complement(1362960..1364126) [Brachyspira intermedia PWS/A] MEKYDTIKFNKNDIIIKAGEQPSEYFYILMSGKTISYYEFHKEYKHESKKGSILGLISAIIKEPYFSTIEAVEDSELLKIKIDSIINIKDENLLTKIYNYLYFILETWLSKYYTILAVNKVDLYNKDDIVTMANIYKKNGYIDASYKLCSKYVELFPEDNDVVKIKNFMKDMENIKYTKEIDHIENNTYKFPKGYCIYTEIYSSDHIYIIKSGKVGIYSIVNSKQIIRNIYTEGYIINGYNPTLEYKPLLTTAIVLEDSIIDIINKEQLIEMIYNDKSLRINFIKMISIKVNNAVLKLKAIKKDELNIKFIIIIYSMLKMHTLYHKDAIKLTLLYSIKDIKNMLNIDIDNKKVRAALKNVKYIELDNDYNIRVTNIENYCKEYKNYII >gi|343386346|ref|AEM21836.1| cAMP-binding protein, complement(1364236..1365420) [Brachyspira intermedia PWS/A] MIDFNVVEFKKDSAIFVAGENAREVFYIIKEGTVIDKNYVVENTNFEFTSGDIIGIVPAILLEPYYSTAIAVTDVQLVEIHTKDIYNIEDIKIIEKIYKYLIKFMEIWLGKYFYKLSESLNIGSYKENDALEIANIYNDNGYKSAALYMYKKIIEMFPNEDHTVINEKINEIESNYKIKPPLEISSNLQEYKKGTCIFSELENNTDLYVIRDGKVGVYSVFDGKIITRIIFKSGNIIGYKPILGNKLLLTTCIVLEDTILQVVNKEDFLRLASNNTKLQYHLVNIMARRTYNTIIKSYSITIKNPIGKFYSMVYSFVKTELLFDKNIDFIELPYTLHDICTMVGIENIDYIKSEMNKIKVILFSGNEKIIIPNIQNFFKEYDMYRKRNSTPNIS >gi|343386347|ref|AEM21837.1| ankyrin repeat-containing protein, complement(1365505..1366545) [Brachyspira intermedia PWS/A] MKGLVYLGNNKIELKEIENPKIIDNKDVIVKVTLSSICTSDFHIINGAVPRAKENIVLGHEFVGEIIETGSEVKKLKKGDRVSGNCITFCGECYYCKNGFINNCEKGGWEIGCHINGCQAEYIRVPYADMSLNILPENVTYDNALFVGDILASGYFGAELCEIKNDDTVTVIGSGPVGLCAMMSAKVFGAKKIIAIDINEDRLNIAKENKLADFFINPNKVENIEEYIKDINKGRLSDGTIEAAGGENTFELAWKIARPNSVVALVAMYEKPQILPLNIMYGKNLIFKTGGVDAVHSDRILKLISEGKLNTDFLITHRVKLDDILKGYEIFDKKQDNCIKVAVEYN >gi|343386348|ref|AEM21838.1| conserved hypothetical protein, 1366625..1367398 [Brachyspira intermedia PWS/A] MQNIMPPIWFVNSSSYNKVFSNYFNRLSNDDKEEYKKLFEEPIVFKGFYDNNLMNGVGEQKYSLEKLRKDFNSGKKIDFLFFYGHTNDKKEVTKSSLSQWYIKDFKENDLVFNCMEKYMMYNKALLFDDKDIANEILNSNQPKTIKELGRKVKNFNDELWDKMKYKIVFTGNYYKFSQNTDLRNFLLSTKNKVLVEASPYDKVWGIKMKYDDENIENPFCWKGENLLGFALMEARDEIKRVYKNYDLIDWSKFLYKD >gi|343386349|ref|AEM21839.1| ankyrin repeat-containing protein, complement(1367413..1368516) [Brachyspira intermedia PWS/A] MKKLIFILFLFSLYLYAQNNDNNKSKVSEKLIDYVNEGNVKEAENILKKYNDYVNNRNYEGFTLLSLAVIRNNIEMAELLLKYKADVNANVDLGDSLLIGAVDNKNMEMVKLLLSYGADIDYQGFRGRTALFSSLNKGGENKENIEMVKLLIKNKADVNIAYDGDYGNEETPLMYAAMKGYKETVKILIENKADINKRNIYNANALIYAYMYGHEDIATILLQNGSDSLDKSLKVCNLNKETLLSYDVPLITAAHYSTNEVFLQKLIDNGANVNYKNYDEKTALIEAADYNNINAVKVLIKNNADVNVQNKYGMTALMWACRKGNLEMTKMLLDAGADKSIKRGNYDALYYAREYGKNEEIIKLLTQ >gi|343386350|ref|AEM21840.1| hypothetical protein, 1369077..1369412 [Brachyspira intermedia PWS/A] MNLFCTKKNINGIKVDKYTIKIKISFEAKVFPCSSEKTDNIKPKNNNTIIAKNSSNSTNSTNLIIKNNIIANKISDATENSIISPNLVKLLYVLFFILKLLSDKTIIIKRL >gi|343386351|ref|AEM21841.1| ankyrin repeat-containing protein, complement(1369918..1371006) [Brachyspira intermedia PWS/A] MKKLIFILFLFSMYLYSQTDNKTKVYERLREYVYEGNVREAENILKKYNGDINNLDYEDFTLLSIAVMDNNIEMAELLLKYKADVNTVVSDGDTALILAVDNNNMEMVKLLLSYGADIDYQGFRGRTALFSSLNKGDNGKENIEMVKLLIKNKADVNIAYDGDYENEETPLMYAIMKGYKETVKILIENKADINRRNRNNANALIYAYMYGHEDIANILLQNGSDSLDKSLKVCDLNQSTLLNLNVPLINAAHYSTNEVFLQKLIDSGSYKDYDYDTALREAASYNNINAVKVLIKNNADVNVQNRDGMTALMSACYNGNLEMTKMLLDAGADKSIKRGNYDALYYAREYGKNEEIIKLLTK >gi|343386352|ref|AEM21842.1| hypothetical protein, complement(1371038..1372090) [Brachyspira intermedia PWS/A] MIFNSFYFQVFYFFCYSFLFSVNSNFENVNKRTILITFLSFLLLFLLSIFTSAPLKDSIPNMTDFFMSNIMINKSILSSIMFFIIILLADNNFNIKNNTYNSFTKLGDIIVFSTIAAIIAFVFWVFIAFFYDRFIFRTNIAGDFESLIEKLLFMSIVFVFSIIPFILFFVQKRFKTVLSIYISRGLLFLYSFLIFALFFALLYEPIRPFDNTKSFIIYNALLILSIITLYFIRADYKAGVITKAMYIIFPILAFLFNILVLGASIYRVIISENKINEISIAVLNIIIAVNLVYIIIQNIKSIIKIFKNNININEAVIGNNKIYSFIYIYSIYSFIFSFIAPIIMVFLKDK >gi|343386353|ref|AEM21843.1| helicase, complement(1372327..1374894) [Brachyspira intermedia PWS/A] MNNNYAKEIDNVFSIDAINYMRKAIVDAYGNEVYFGINFNAYGILDYIEVMARGNKDSVPAIISLSLEFDAVIHNHPSGQLTPSRADLAIASELGNNAGVGFYIVNNDVDDYYEVVKPIKSENVKTIDVPEALYMFTENGTLSQLLKKYEYRQEQTELVEATIEAFNNNKHLISEAGTGIGKSFAYLIPALLWLKENKTRIVISTNTINLQEQIISKDIPSIIGGIAPNVKYALVKGRNNYVCIKKVKEGLNDHDKFDFEEQINFFEDIDHWLNITKDGSITDLGYKPKGELWEMVCCDTDTCTHRKCEYLEDCYFYKMRKQLNAAQLLIVNHHILCADLSLYAETAGRYSLLPRYTKVLIDEAHNFENSASSYFGDEGSKNGILKALFYLSRIKKNKRLGVIESINNMLNEKQSLIEKHEYDEILDLINKAHDLTSRVRNVVEDKSKEFITYCHKNIQTKEGLGYKFRISPELVMSQHWQNEGLKALREMVLSMTSLVNVCDKLYKKFFDIAIEKDFDYEEIAQMSNAYLERLKRQLVSLNSTIDYKKDEYIRWVETRLTKKGNLILNWHLTPVTVAKNLNDFLYSRFDTVAMYSATLTVSKSFNFFSNRLGFDYIEKNKKIEIYLESPFNYEDNARLYIATDMPDVAADTFNDFTSKVLLQVCNITGGRAFILFTSFASLMNVYENTSEKLKSKNINALAQTASIHRHTLLDMFKSSSNNVLYGVDSFWEGVDVAGKNLEVVIIPKLPFAVPTDPISEGRYRYIEENGGNAFLDYALPFAVIKFKQGFGRLIRSKDDRGVVFVLDKRLYTKTYGSQFIQSLPNAKILRGSMGEIFNDMNNFLTINFILNIKQS >gi|343386354|ref|AEM21844.1| enzyme of poly-gamma-glutamate biosynthesis (capsule formation)-like protein, complement(1375403..1376446) [Brachyspira intermedia PWS/A] MTHPTIVKAFESNDVLIDLKDYFKGDIVFANLEFVVNTNKPPMPYPEFNGSLDYLQYFFNYFNTFSIANNHAYDQGAQAESETVAELHRNNKLTLGGSTNSPSIAPIITNINNVPLFISAYTMLDNGLSHKTNKNDHFYFMNFFPKQEDLVEKVKSDLALATNNEIKIISLHFGLEYTTAPEEKTKETARALIENGVDIIVGHHPHVPRPVEIYEGTNHSGIIIYSLGNFIANHKGRYPHLDIGTVVSLEINENKEINFSYVPTYYAFFKQNGFEVVMKPIKEDPNINMPTLASNYVYNTYDTNAIKKGYELIHDFYSPLTNESVKTMFADNITNSSIVSNNSLAHR >gi|343386355|ref|AEM21845.1| hemolysin protein, complement(1376613..1377947) [Brachyspira intermedia PWS/A] MLSALFSGSETAYTSIDDVTLMRLVREKKIKEEDKKYWEKSSSMIPTLLVGNNIVNISASSIITVFAVRLADILPHVSTNVMVTISTATITILIIIFGEILPKVLMRVNAEKMMPYLLYFMKFCHFIFKPITFLMDKITTFIMNYFVPKRLRDAEKRSALSSMDDITTIIHLGHKEGIIKEYTHEMLTGVIDFRNKTVEEIMTPRVDMVCIEAETDVNEIIKLTVESGLSRFPVYEETVDHIIGIFHTRALFKEYVKGGGKMNKIKKKAIDYIMLPYFVPETKTISSLFNDMQKKKLQMVITIDEYGGTAGLVTMEDIIEEIMGDIEDESDKKEADVIRFKGKRIIINGNAPIEDVNKTLKLELEHEEYQTIAGYVIDMLDHIPETNERFILKGYRVRIMKVEDRRIVEMEFTPLKYSRTNESDNIDLQDTTDSEKNDSEILNE >gi|343386356|ref|AEM21846.1| hypothetical protein, complement(1378027..1378701) [Brachyspira intermedia PWS/A] MIKNIIYISIIISLLLSCTNTVSSNVIQTNDVAIKPDISDKYKITPNALRLQLLSEYTQTHYGSKLIYLDNPQIIVVHSTETPNLSIAVNIFKNDTLIGRPDIEAGGEVNVGTHFLVDFDGTIYANTPIEYIARHTVGFNYTSISIENIGYADKLTKEQLEANVKLIKYIKSKYKSIKYIIAHYEYKDKTLPHYSLYKELNTKYINPGKRDPGTNFMQELRKRI >gi|343386357|ref|AEM21847.1| CheC domain protein, complement(1378711..1379211) [Brachyspira intermedia PWS/A] MATTPIKFMDVRFINPFIVSLVSIFKEMAGLTMEKGTLVKGQGRKLFSGYGVAIGIVGDVNGQVLYEFPENFSQLLTENLTDKKRGEYDSEDDFEDMMRSVINEMGNTISGLAITKLAEEGISCDITPPILYFGKEIQIIPKNLQTIIIPFQSSLGFVSVNIAMDA >gi|343386358|ref|AEM21848.1| DNA polymerase III, alpha subunit, 1379494..1383204 [Brachyspira intermedia PWS/A] MSFVHLHVHTQYSILDGAARIKSLYSKKDKTKRLIPGLIDRAKELGMPGIAMTDHGNMFGAMEFFSEAKDKGIIPIIGCEVYVAPKTRFDKKIENSEEKSAMHLILLAKDKEGYNNLCKLVTFGYTEGFYYRPRVDHELIEKYNKGLICLSACMGGEIPIAIRKKDYKQASKLAEYYKSIFGNDFYIELQDHNIPEEKSLNSALYKLANHHNIELVVTNDVHYVSKEDAKAHEILLAIQTKATLDSPRRYKFPSNEFHLKTEEEMMKSFAKLPKAFENTVKIAEQCKDLNIMTKTYYMPNYELPNGETETTALRKMCLDGLNKYYNNDIPKEAMERLDMELGVIGKMGFEGYFLVVQDFINYARNHDVAVGPGRGSAAGSIVAFATGITKVNPLDYDLLFERFLNPERKSMPDIDVDFQDDKREVIIDYVKEKYGKDNVSQIATFGALGGRSVIRDVCRVMGIDLATADRLAKSIPDDVKRVVDIYDHPDCAALVKEIEGNRELKNMYEISTRLDGLVRNVGLHAAGVIISSHPIADLAPVYQDSKTGTRACQYEMTYVESAGLIKMDFLGIKNLRLIKDAIKDIKDRYGVEIDIDKIPLDDEAVYDIFRKADTGGVFQFESPGMRQMLINIQPTGFDDLVSSVALYRPGPLNSGMDKDYADRKNKRKEIVYKHPDLEPILKESQGVLIYQEQIMAISRVIGGFTAAEADDLRKAMGKKIVEKMNSMREKFITGGLERGYDEELLNYLFDTMKGFAEYGFNKSHSVCYALIAYQEAYIKAHYHMEYYVALLNTVIADTDKIALYLNEIKQKNIEIVTASVFESDALFSQKDGKIVYALHAVKGVGLHAALAIQEEREKNGQFKNLEDFVKRVDVHLVNRKVYETLIKCGAFSEFGHTESALLSSLDAILAHASNYQKETLSGQTMLFDSMSEDDSGSASLVIEKQVEYASNILMENEREVLGFSLRYHPFARYITKIDYKYFHNTLDIDNLKDKDEFLLPCVVMSAIETTTKKNTPMITLKVMDIFTEYVFYITANSQIEKYKDMLEEQTGILIKGRRDKNRFSDKIYNNIVDIKLLDSFLKDKNLKLKEVKRDNIKRENNSESTPENRQVHVNKNDAPFKNTSNKENDIKRSDNVVSNAPFTSRPNNSIAVKHTNSGKKQLALYMNKNIFDDMDLLCLQNAISSNPGDYTIFLKLKSESGMEIFKIGEDYKVDPNPRFLNEAKSALRSLIEIEYA >gi|343386359|ref|AEM21849.1| ATP-dependent Clp protease, ATP-binding subunit ClpB, complement(1383300..1385879) [Brachyspira intermedia PWS/A] MDYNKYTIKAQEAVNEAANIANGEDHNEIKSEHLLLALLKQEDGLIQPLVERIGVPINTLIDKTQRLVDENVKVTGENVQLHLSTNAGKVLAKAEKEANALKDQYVSTEHIFLALVEADNKAGDMLRKSGISKKEVLSALKDLRKGQSVNSQDPEAKMQALDKYCRDLTSLAEAEKIDPVIGRDEEIRRVMQVLSRRTKNNPVLIGEPGVGKTAIVEGLARRIVSQDVPDGLKNKRLLALDLGALVAGAKFRGEFEERLKAVITEIEKSEGNIILFIDELHTLVGAGATEGAMDASNLLKPALARGELRAIGATTLDEYRKYIEKDKALERRFQQVYCKEPSVEDTISILRGLKDKYEVHHGVRIKDDALVAAAVLSNRYITNRFLPDKAIDLVDEAASQLKIEIDSQPTELDKIERKILQLNIEKQALSKENDAASKERLEKLEKELSELSEERNAMKLQWDNEKGRIEETRKLKEELEALNIKETQYTREGNLAKAAEIKYGKIPELQKKLEEATKAMEEAKNSDKKRLLREEISEDDIARVISVWTGIPVSKMLASEKQKYLQLEEVLHKRVVGQDEAITSVADAIRRNRAGLSDENKPLGSFLFIGPTGVGKTELAKTLADFLFSDEHALTRIDMSEYMEKFSVTRLIGAPPGYVGYDEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRIVDFKNAIIIMTSNLGSDLILEANDTNDIKEKIQELLKMSFRPEFLNRIDEIITFTRLDKKYIAEIVRNQIARVANRLKDRRITLDVSDEAIDYIADIGYDPQFGARPLKRAIQNFIENPLAKEMLAGKYLEGDTIKVKKSGDGLVFEK >gi|343386360|ref|AEM21850.1| hypothetical protein, complement(1386179..1387927) [Brachyspira intermedia PWS/A] MRNKFYIIIFLLASLFILIISCKKINLLSPSIIPPPTEFPNDGQIPEYPIPSPTLPIPPKKTEEKNIVVTPEIVKDGTVFGGYGRRFKFKNEWHVLATNEYEYDPNTKRLTPTGKGAILKIDNNGKTITKIHSLSLGDDLEKREYWTNLNSRKVLIEESKVRIPTSGDYGSIYTKTEKKYEYKNIKYYNTNFKYISSVFLNLRGKDTSDLINWIDSPDVYKREYILPKLDFDNPNFQGRIGSGHADTTLMYFKGKFLLFTHPTVYDYYTDGFIPPSSEYFYLDSKYYYSIDVDKDTSDPKNWQTNETPWGRRTRIDNYRYDGKKMYMAGGNSYAYKYNTSDGYWYLDILKAYLPTMEDGIWSTEDGINWELEKTPYPFRYAGEIVNYLKINPLITYRASDDGTPFEPKYTELSGKYYRTFNTTYPIPPVKEIMQAVERFETNFTITEEHIKNSGIYQIQMSSVHPDNAKETDWVTIVPKNQITSSTAWESGGADLFNFNGKLVRLVDYDREFKLNNQYQEALNLSEQYYNLLINSPISEYKKNCYYFLYYKAMADMIKIIKDRSNEYFKPDKAFTHYTFEIN >gi|343386361|ref|AEM21851.1| sodium:alanine symporter family protein, 1388373..1389773 [Brachyspira intermedia PWS/A] MDTVSSIVAKVNSFLWDYLLIILLCGSGIYFTIRFKFVQIFKFKDGWDRTFGSISLMGKSAGKEGMSSFQSLATAIAAQVGTGNLAGAATALISGGPGAIFWMWVSAFLGMATIFVEASLGQKYKTTTEDGHIIGGPAYYIQAAYKGWFGKVLSVLFAIFIILALGFMGNMVQSNSISGAFVNAFPQIKPIYVGVVCALIAAFIFIGGLKRIASFAEKIVPIMALFYIIGSLIIILMNIENLGSSIVLIFTSAFNPQAVIGGGLGIGVQQAMRFGVARGLFSNEAGMGSTPHAHALAKVKHPCEQGVVAMIGVFFDTFIVVTLTALVILTSNILQTQIYPLTSAADIPEILKGVGLPQEAFRLGFGYFGVIFVAICLFFFAFTTIIGWYFFGEQNIKYLFGVKAKKVYAVLVVGFVLLGSALKVDLVWSLADTFNGLMVIPNLLGLLALGGVVSVLFKEYNELNKK >gi|343386362|ref|AEM21852.1| methionine sulfoxide reductase B, complement(1389852..1390214) [Brachyspira intermedia PWS/A] MEKRELTEEERNVIIFKGTEYPFTGEYNDFFEDGIYCCKQCGAELYRSEDKFKSHCGWPSFDDEIAGAVKRSLDEDGYRIEITCNNCGGHLGHVFIGEHLTAKNTRHCVNSISLIFKPKK >gi|343386363|ref|AEM21853.1| Sortase related acyltransferase, complement(1390232..1390804) [Brachyspira intermedia PWS/A] MKIRLANTEDTSQILSIYSQYIDTSITFEYKLPTLETFKNRIENIIEKYPYLVCEDENNKIIGYCYANKFLEREAYNWSCELSIYLDNKNINMGIGKKLCSIIIDILKYQGIKNIYSKITVPNTKSEKLHYSLGFNLIGTYNNIGYKNGKWHSVRLFEKELIFDYNNPKDIIPIKEIDKEKIIFFIENYK >gi|343386364|ref|AEM21854.1| purine nucleoside phosphorylase, 1391338..1392036 [Brachyspira intermedia PWS/A] MATPHIAANKGDIAETILLPGDPLRAKFIAENFLENVTQYNSIRNMFGFTGTYKGKKVSVQGTGMGMPSCSIYSYELIHFYGCKNLIRIGTAGALVDKLHIGDLVIGMGACTDSNYAAQYELPGTYAPIASYELLRKAVNKADEMKINYHVGNIVSSDVFYGANNATPKWAKMGVLAVEMEAAALYMNAAYAGVNALCMVTISDSLVTGEATTAEQREKTFTNMMEVALSLA >gi|343386365|ref|AEM21855.1| 3-deoxy-7-phosphoheptulonate synthase, 1392375..1393418 [Brachyspira intermedia PWS/A] MIVVMKPNAKEEHVNSIIERLKNAGLGINKSVGVDYTVIGMVGDTSKIDRELIASLPGVSKVLKVQEPFKRANRAFKKEDTVVDVSGVKIGEGKPVIIAGPCSVESEDQVINIAKSVKAAGASILRGGAFKPRTSPYAFQGLALDGLKILKLAKEEVGIPIVSEIVSIRHLEDFDNTVDMIQIGARNMQNFELLKEVGKLKKPILLKRGLSSTIEEWLMSAEYILNQGNENVVLCERGVRTFETYTRNTFDVSAIPAIKRLSHLPVIGDPSHASGKAWMALPLTLAAISAGADGMIIEVHNDPEHALCDGAQSIKPDVFSDIMESVNMISDTVAKIKEKHGGKIYTK >gi|343386366|ref|AEM21856.1| CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase, 1393554..1394831 [Brachyspira intermedia PWS/A] MLITIFALFILFQSSVFGYIDPGTGSLLFSALFGIIGTLFFLSKALLIKLKTISFSKSKNIETEASKKARIIIYGEDKRYYNVFKPIIEELIKLEIPVIYYSSSEDDQIFEIKNDLLHTEFIGVGNKAYAKLNFIEADICLMTTPNLDVFQLKRSKGVKKYVHIFHAPSEAALYCLYSLDFFDAVLLNGENQVADIRELEGTRNTKVKDLEIIGSTYLDELNKKKEEALKSITKSTDKRTVLIAPSWGMNGLLTRFGEKLIDPILDSGYHVIVRPHPQSLIVEKDMIEKLKNKYKDNSNLEWDFNRDNIYSLSKADVMLSDFSGVIFDYAFLFDKPTIIPSFTFDKRGYDAIELKGETWTFKTLPNISVSIDENNFANISSIVEDTINNNSLKDNILKAKDEAYMYRGQAGVRGANILKSYLETI >gi|343386367|ref|AEM21857.1| phosphonopyruvate decarboxylase, 1394944..1395963 [Brachyspira intermedia PWS/A] MEKYGISDNHIIAANEGNAVALACGYNLATGYYPCVYLQNSGIGNIINPVASLLNEKIYAIPTLFIIGWRGEPGVKDEPQHLFQGEITLKLLDDLDIEYVVLDKNVTFDIVEDSLNKFKSILDKGKQAAFVIRNDVFEKEKLFDYKNNNSLIREKAIETILKYSENDIIVSTTGKISRELFEIRENKKLGHNRDFLTVGSMGHSSMIALSIALQKKDKRIWCLDGDGAVLMHMGALAIIGNRKPNNFVHVVLNNFAHESVGGMPTVADKINLPEIAKKSGYEYAETVNSLDELNDVLSNLKNVLSFIEIKVSIFSRKDLIRPNITPLDNKNNFIKFLRQ >gi|343386368|ref|AEM21858.1| putative phosphoenolpyruvate phosphomutase, 1395993..1396889 [Brachyspira intermedia PWS/A] MKAFILKSDFSSYIVYNNEDLLKRQLRLLSKFEITDIYFLYKNNNIDKYCREYNLNYTIIDNISNVFDGSLEDDILILNGDSIFSEYVLSDVLAFNTKAAAVNSYVNLSGVTIDQNNIVKSIDINTRDNLFYYFPIIKINKLSNINDYSKIFDFEDISLIENNSNEICFVLDNCTRKKEYINDYFNKERVVYLAFSTDIIHGAHIRILKKAKELGKVIVGVMSDQAVASFKRYPVLDYEHRYEIIKNIKYVDEVVEQKTLSYTDNLMSIKPNYVVHGDDWRDDNLRYIRDETINTLKK >gi|343386369|ref|AEM21859.1| putative phosphoenolpyruvate phosphomutase, 1396979..1397848 [Brachyspira intermedia PWS/A] MRRGRLKKILSYKPTVSIIEAHNGLTGLIAEKTTVIKDGRYYQFDGMWVSSLCDSTSRGKPDIELVDLSSRLQTIDEIMEVTTKPIILDADTGGLIEHFVYNVKTLERIGVSAVIIEDKIGLKKNSLFGTEVEQQQDTIENFCNKISSGKKVLKTKDFMIIARIESLILEQGMEDALKRAFAYVEAGADGIMIHSRRKEPDEIFEFCHKFREKDNKTYLVVVPTTFNTVTEDEFADIGVNIVIYANQLTRSAFPAMKKTAETILYNRRAKEADDMCMSIKDILTLIPEE >gi|343386370|ref|AEM21860.1| aminotransferase, class V, 1397867..1398976 [Brachyspira intermedia PWS/A] MKIMNIKRNILLNPGPATTTDTVKMAQVVSDICPREKEFGEVMEFIIEELTNFVANNKDYTTVLFGGAGTAGVEAVLSSICNGKKILVINNGSYSQRMTEILSTYDADFYNYKSDLIKPIDYQKLEEVLKNNKFDYVCAVHNETGTGLLNDIEHIGSLARKYNIEFVVDAMSSYAGIPIDMEKMNIHFLIASSNKNIQGMAGVVFAICNRVSLEKLKNIKSKSYYLDLYAQYANFTKTKQTRFTPPVQTLYALKQAIIETKEETIEKRNKRYTESFETLIAGLKKLNLKLLLDYECQSKIITAIFEPECDGYNFNNMHDYLYERGFTIYPGKVSNFNTFRIANIGAIDKNDIANFLNILEEYLKSIKYI >gi|343386371|ref|AEM21861.1| choline kinase, 1398988..1399722 [Brachyspira intermedia PWS/A] MRGIILAAGKGTRLYPFTLKEPKPLFKVNGKTLLERNIDFLRSNNINDITIVTGYMNEAFDRYVEKYNLKKIVSDVYDKKNSSSSLNLVRDILDDSLIINGDIYIKENVFPYIKPNVSQIISKKIVKGEEDGYISRDSDDRVIKIVKKSTSGYGDTGMMYLVGDMAKAVSEKLPFAKDEEFWEDIVYNLIDDYPLYLTKIPNLIVEIDSARDAILEGLMTKEDVINACNNDDDLLKKLDEVLNY >gi|343386372|ref|AEM21862.1| MFS superfamily transporter, complement(1399832..1401094) [Brachyspira intermedia PWS/A] MNKINTKKWITFSILILGAGTFTKAAYLKDAFYIPMQEYMNVTHTQIGLAMSVYGLVQAFGGSLSIYIADRFSKKILIPFGLIGVSITGLYLATFPSYIGILICWGLFSLFAEIISWPVILKAIRLLGRDNEQGRLFSFLELGRGIVDVSIAFIGLRIFILLGSNALALRSTIIFFSITVMIAGILSYFLLENDTIKLEDKDGNKISKNRAVLNGIITVLKNKEIWLVSLTIFSVYSVYCGITYFIPFLKDIYGVPLEFLGTYGIINQYGLKIIGSPTGGICSDKIFKSPTKYLRLAFILSAITIIAFILLPHEHMNKYFYVGMILTLSYGVIVFSMRAIYFAPINEIKVPKEITGTAMSVACMIGYFPRSFIYTLYGYILDHNNGIKGYNIIFFIMAGFSILGILISSILLKNIKNKIN >gi|343386373|ref|AEM21863.1| inner membrane protein, 1401480..1404473 [Brachyspira intermedia PWS/A] MFFDILYNIFIYPIEFIIEILFYLFNTVFQSGYGVSLFFLSLCINFLSLPLYNIAESWQAKERAIQDKMKPMIDNIKAVYKGDQRYLLIRACQRINGYKTIYAFRGTLGLLIQIPFFMAAYNFVHSISGLNGQSFLFIKDLSKPDALIHIGSISINLLPFVMTLFSLFAGFVYAKKLKFKESLPLYIVSLIFLVLLYTSPSGLLFYWTINCLFSLIKNIVIEFKLYEIFLKNKYKLLKVYNIFFIIITAVFILLISLANIERKGYLSDFEFINNRDGYFYSARVRYYSKIFITSDIFSFVGNNDKLDDNVISIEFVGDSTITSTLTLKDKIENIKDDIVIYYRLSPRSYSINIYLFLLFITAILNMSNIYKFIFNKTSLIESFEKNRYKLMLTSCLTISILSGLFILSSLISNSPQEFSSPFYLIINDLSMSIGLFLFYPMFIYSLFSERIKNYLTLLFLFSVIFVLINTFVMTGNYININNEFLFDNADLLKFSFKELLLNLSLTFIFGLILIFILRINKSIFFININCIILAVLLIISLLDMSKIYNSHVKLNDIKQQSNELSGFKIFNLSKTGENVIVLFLDRAINSYWLDAFEEFPEYKEKLDGFTIYPNTVSFSGLTVTTASLYGGYDYLPFELSTNGSYVLKDKHNEALLTIPLLLGNYGYNSILLDPPYANFSDTSDLSIFDDYTNISAYPSDSILNYSLNIYMGGTNFNFEKTLEMDQKNKSLRFSLFRMMPINLRYNFYNNSGWFLASSSFLRFNSSVRYYSILDSTTNFMNINENGNYYNMIYNLVTHESYSFSSDFLPHTTLKDIDVKDLDIYKDESSVRHYYVNVAAINSLIKIIKYLKDNDVYDNTKIVVISDHGRGVNTTVFTNDNCEFMPLFNALLMCKDFNSKGNIKIDTNFMTIADMPYLVTKHIDNPINPFNNKIITNDYKNNGVNIISLDSWQVDRQLTNSYHFNYYYNVKNNIFDINNWKKFKIDWKTKESKEVELK >gi|343386374|ref|AEM21864.1| sporulation stage II protein D, amidase enhancer LytB, 1404589..1405695 [Brachyspira intermedia PWS/A] MNSIYAFANQNIIRVQLTDVKAPYTINIKGPYKAYNYKYESEIISALTNETVMVVENRLGLKVNDVGVYKEGIVFETQDGFTLNGVEYYGSLMFIPYNNTMIVVNELNIEDYVKGVLPHEMSPDWPMEALKAQAVAARTYAMYHILKNANKLPFDVDNTTKYQVYNGKEKMNWSVEQAVDRTRYEIAVYKGKVIATYFSALCGGHTDSAENVFGVAVPYLEGVSCPYCNAQIKPWTNTLTYNELNNDLANYSVHASEKSSIGISTDPKSGKATNIKIDESDISSRDFRTTLSPKVVPSLNFTIKKVDNGIIITGKGSGHGVGMCQWGAYGMAQVRKDYKEILKFYYNGVDIVDYNRVNKEFEPDVWGN >gi|343386375|ref|AEM21865.1| aldehyde dehydrogenase ywdH, complement(1405774..1407144) [Brachyspira intermedia PWS/A] MDLIELRDKQKKFFQTSKTLSYNFRIEQLKKLKSMLIKYEKDFIDALYKDMQKCEFESIASEFYMVIEEINLFIKNLKRWMHHKKVKKNMITMDAKTMVINKPFGVSLIISPWNYPVQLTFLPLVGAIGAGNTAIIAPSQLTPCVYDVIYDSIKNTFDEEYIAVIDKTVPPESTTKIEYDKIFFTGSPRVGKIIMSNASDFLTSVTLELGGKSPVIIDDIKGNNFNKAVKRIIWGKFLNSGQTCISPDYILLREDLKEKFLAAFSKEIELFNKERKLHRIINENHYKRIKSYLNDGKIIYGGEYDDNNLSISITIVEPKDLETNIIKDEIFGSIFPILYYKTKEEAREIINKVCSRPLAMYVFSEDIAFNYYFIEKMSYGCCAVNDTISQILNPHAPFGGIGNSGIGQYHGYDSFKCFSKETTILNKGYGFEIDTRYPPYEKNIKSLKFLYNLTKK >gi|343386376|ref|AEM21866.1| Lytic transglycosylase catalytic, 1407305..1409554 [Brachyspira intermedia PWS/A] MKNKAFKRFILFIICFAIIIAVIASMLTAQDISLKKKITSKNKINYGTALELYNREKYLEAYNQFTNIMNRDEDAIIKDYIIYYGAKSALSTNMYDEAIDLYSLLMKEYTNSPLYPYAEQYKALAEFYKDDYPVSNFFNSRKQKWIKEFVGIRALRNTDDTNKAKMIAYELITKLSNSEAIIYYNDNYEDEISLFDNELKYKAASVLYDAGFRKSALKHFEYLYSNNYNKGNSTYYMARINEAEGNRTEAAKLYDEYLSNANNKTYRKMGLYYSAGNYSKLTNNAKSMELYNTFLREYPRDDYVPRIYNNFVNTSLNKNNLVQAKVYLTNVMNKFPNSWQTELALKSYLRKAFKLKNKTETYFATSALEKRYTKFRHDFPLSWSMWSAEEFGDTEKRDEYLMKTLLTSKNHYFVKGALTLANDDMIKNVEISNTYYFDEAKKYYTDSNYTKSMEMLDKIQFLNYIATGKEDDLMKSARDMAKNILMQNDFVKELYSNKTDYTLFNELSLQTTNEVDRSILLYCYGDYDNAYTEYDKIFKKAEKVNYPLFYFAEKIFKDSGNTKRLMQISVNIGKYFDYPYTYNTDLLPDEFRKMVYPRYFDEYVLPEAKHYKIDPLFVYAIMREESTFDPKAKSWVGAMGLMQLMPATAAEQNRNPRYRYDPLDLTDPKQNINIGIGHLSWLFKNENASNYIIVAASYNAGSGRGARWKKEYGTNNMYRTGRFIDIEETEYYVEKVINSYEHYSKYYQD >gi|343386377|ref|AEM21867.1| Lytic transglycosylase catalytic, 1410073..1412253 [Brachyspira intermedia PWS/A] MTSILGAQDISLQKNIISKNKINYGTALELHNREKYLEAYNQFTNIMNTKDDMIIRDYIIYYGAKSALLTNMYNEAIDLYALLMKEYPRSSLYPYAEQYKALAEFYRDDYPISNFFNGKTQKWIKEFVGIRALRNTDDTNKAKMIAYELLNRFGLSEAAIYYNNNFSEDISSFPNNLKFKTAAILYEAGYRKASLKHFEDLYDNNSHKASSTYYMARIKQKSGDRKDAAALFDEYLSNANNKSHRRLGLYYSADNYTKLKNYNKAAELYNTFLKEYPRDDYVPRIYNSFVTLSLNRNNLVQAKTYLTNVMKRFPKSWQTELALKSYLRKAFKLNNKTETYFATKALEARYPSFRHDFALSWNMWTAEEFGDIEKRDEYLMKTLLTSKSHYFVKGALSLANNEMIANVQLSNTYYLNEAKRYYADSNFTKSMQMLNKIQFLNYIATGKEDNITREARALAKNILMRNKFVKDSYANRSENDLFNELSLQTRREVNKAIILYYYGDYDNAYTEFDKIFKKTQVTYPLFYFAEKIFKDSGNTKRLIQVSANIGKYFGYPYNDNVDLLPDEFRKRVYPRYFDEYVVPEAKYYKIEPAFVYAIMREESLFDPKAQSWVGAMGLMQLMPTTAAAENKKARYRYNPLDLTDPKQNINLGVSHLGWLFSSQKASNYILVAASYNAGSGRGRRWKKEYGTNNMYRTGRFIDIEETEYYVERVIKSYEYYSKYYKD >gi|343386378|ref|AEM21868.1| periplasmic protein, complement(1412375..1412803) [Brachyspira intermedia PWS/A] MKILKVILTIIIISSSSLFADDWIVSPDNLPERAKQFIAQIFPDAQIWYVEMDDGKYEVELSNGIKIDFLGNGDWKEIDAEYIGIPYNAFPANVANTIRNTYPQTVIISAEKKWGTYEIKLNNMMELYISSDGQLIGQKFDD >gi|343386379|ref|AEM21869.1| hypothetical protein, complement(1413025..1415589) [Brachyspira intermedia PWS/A] MKSLKKEIIYPIIFAILSILFFYSNLTFSYLQMGDVILWDIKNIKDAIFSGNLYFWNNAYFTIATSSTVPIHPKSLLIALLPNNIYPQVSIMFHITIMGYGLFLFLREKKLSIKASMFGAVALMFSNAMITLILPGHLGKFETYCYFPFVLYFLSKAMNSEKWIHFLFTGAFLGIAFLGGALDVAMYFALFLSCYFLYLLYNKKNDKKIIEFIKTDIKKIILLCVKFALVAVFSFLMSIQIIMVTKNTQDMGAAGVTDKNQLWEWATRWSYPPEEVLGFFMPGFFGYYSGSQTHPYWGRIANMPGEPKTSNFSLTSANIGYITFIFIIFAIFISRKKYSEKYFWIGTALFFLIASFGRYFPVIYGALFQIPIFQDARNPNKFIEIIPIPFAILSSFACDYIFKALEAKKEDKLLKYLEDDYKYINIAQKIMYAITIVSAVLALITILTNGMIYNSFVNDWKEANAALISKNIFMSFIRLTLISSSVLLLINNAISLKEVTIKDKFLVIVPLIGFILFSVYDLGHIGFLIIGSIIVFLYVVIANKDKLFYKYLPYMFIAVLFLDLAQSGNMFVVKSNYDQMYKSTPIVDHILNEKGNETTMPILIPYLYRYTTHTMPYYKIPLTEPPAASRLSKDITDVFSAFRINDYVGYQPRLMDLLGVRYILSPTYLDQSVLSNDLTKITEYQDQFSAAVLYELKGYRNKYEFVNNAYNAVDFNDGLGRITMPNFNLANEVVLLNNSNNNITLNNGNAIYTAELLEESDNKIVINVKTPEAGVLVSKERYNTDWSVTVNGEKKELLNANLLFRGVYVDAGDNNIVFEFTPTMKYLYSTIICWIIFIVISILNIVLYFKKQDN >gi|343386380|ref|AEM21870.1| hypothetical protein, complement(1416009..1416149) [Brachyspira intermedia PWS/A] MGPGIIKNVLSLIIKVSLKIINKIKKYFIYYSTYIFFTILYLVIFI >gi|343386381|ref|AEM21871.1| Serine-pyruvate/aspartate aminotransferase related enzyme, 1416112..1417257 [Brachyspira intermedia PWS/A] MRDKTFLMIPGPTPVPESALIEMAKHPMAHRSKEFSNILKEVYEDLKYVFQTKNDVYLFTASGTGAMCAALENLINEGDKVLCLSIGNFGARWAKIAASRGAVVTKVEVEAGKVITPEMLEEALNKDKDIKIVTLTHSETSTGAANDVKTLCSIIKKHGAVSVVDGITSLCAMEFKTDEWNIDVAISGSQKGFMIAPGLSFLTASEDAFKMHEKCKYPSFYFNWTEHKKSLAKDTTPFTPAVSLITSLHTALKMIKEEGIENVNKRHKKLSLALRAAVRTIGLKLLVEDDNNASHAITSILPPEGISVPDIRKTLKEDYDIIVANGQGNLENKIFRIGSLGFVCERDLIMAMGALEASLLKLGYKFELGSGVKKLIEELNK >gi|343386382|ref|AEM21872.1| hypothetical protein, complement(1417325..1417540) [Brachyspira intermedia PWS/A] MNYRGGFFSLLLLLCSPTFKVPNWFAYNKQINKFICTNVASAHFIITMLKKVYKLINNKLLNKLFSLSNYY >gi|343386383|ref|AEM21873.1| D-3-phosphoglycerate dehydrogenase, 1417596..1419200 [Brachyspira intermedia PWS/A] MKVLITDKVNECVKDIISDVSEAVFLPTMSEDELVKVIGEYDALMVRSQTKVTKRIIEAGKNLKIIGRAGVGVDNIDVEAATEKGVIVVNSPDGNTIAASEHTIALMLAVSRNIVPAAVSTKEAKWNRDKFTGNELLGKTLGVMGFGRIGRKVVHIALAIGMKVIVYDPFATEEIVQKAGAVYETSLDEFLPKLDYLSLHIPKTPETNNIINKDNLCKMKNTAIIINCSRGGLVNEEDLKNALENGTIAAAAVDVFVNEPKIETCPLVEYKKDNLILTPHLGASTKEAQINVALDVAKQIKQVLSGGYTESAVNIPSLNPEKLEPVKDYMKISENAGEMIMQTANGKIKSLEITAQGDLINLDIQPLEVAILKGALSYMFQDVNYVNAPYLAKQRGIEVKTIKSEAPSTFTSILKVKLTTDKETTSVSVSLIAKNIARIVKFNDYDVIIKPQPHILIVPHINQPAMVAKVATVLSGDGINIGSMSVSENIKGSSTSIMAINVDRVIGNDVITKISNIEGVQDPKYVRLTAEYSL >gi|343386384|ref|AEM21874.1| phosphoserine phosphatase, 1419219..1419845 [Brachyspira intermedia PWS/A] MKLAVFDFDSTLMDGETLDIIAKETNFAKEIAEITARGMRGELDFFESLQSRVALLKGIKLETVNEICNSLPVMNGAKEIIEELHKRDYKCVCFSGGFKNATVPFAKKLNLDAEFSNIFHVKDDVLTGKVGGEMMFSDSKGNMLLTLQRLLNISYDDTLVVGDGANDLSMFKYAKNKAAFCAKEILKKEANIVIDKKDLTLILEKLNM >gi|343386385|ref|AEM21875.1| Citrate (Si)-synthase, complement(1420015..1421358) [Brachyspira intermedia PWS/A] MKKEYLLYKLYDHSSKRIKIDSELFQKYNVKKGLRNEDGTGVLVGLTNVGDVVGYEKDENGNVYPIDGKLYYRGYSINDIAEDILKNNRFGYEEVCYLLLSGKLPDEERLQSFRDLIAENMYLDKKTIMNIIDLEGQNIMNILSRSVLEMYIHDPNPEDLSLDNLMLQSIQLIARFPAVIAYAYNMYKYSVNQKYLNITLPKPKYSIAENFLYMLKQEFSPLEARMLDLLLILHADHGGGNNSTFTVRVTSSSRTDTYSSISAGIGSLKGDLHGGANAKVMDMFIHLKEVIDNWEDKNEIDDYLTKMLNKEAYDHSGLIYGMGHAVYTLSDPRAVILKDLARQLAKEKKKECELQFLELIEERAVECFMKVKGEKKRVCANVDLYSGFIYDMLGIPKEIYTPLFAMSRIVGWCAHRIEELNFDDRRIIRPAYKNVIEPQEFISMDKR >gi|343386386|ref|AEM21876.1| isocitrate dehydrogenase, NADP-dependent, complement(1421436..1422695) [Brachyspira intermedia PWS/A] MSKIEMKNGKLIVPDNVTIPFIEGDGVGAEITPVSQMIVNEAVKKAYNGKKSIEWLEVLAGDKAQQKLGTPLPDETINTFKEYLIGIKGPLTTPVGEGMRSLNVALRQTLDLYVCLRPVRWFKGTSSPVKEPNKVNMVVFRENTEDIYAGIEWKTGTEEAKKFYNFLKNEMGVSKVRFPETSSFGVKPVSEEGSKRLIASAIEYAIENKLPSVTLVHKGNIMKFTEGGFKKYGYELARKEFADKTFTMEEYAEIKKELGEDKAKAKLKEAKESGKIIIKDNIADAFLQNTLLKPEDYSVIATLNLNGDYISDQLAAMVGGIGIAPGGNINYKTGHAIFEATHGTAPDIAGKNQANPCSLILSSVMALEYLNMNEAADMIINALEKSFESGYATEDLANFMDNGKPLDTKEFGEKIISLI >gi|343386387|ref|AEM21877.1| aconitate hydratase, complement(1423005..1425260) [Brachyspira intermedia PWS/A] MEVYDIEMIRNFYKGYSNKINNIKSKLNRSLTLSEKILYAHLYNENDIKDFKRAEDYADFRPDRVAMQDATAQMALLQFMNAGKTSSAVPATIHCDHLIEACKGAEEDLKNAINTNKEVYNFLESVAKKYGLGFWEAGSGIIHQIVLENYAFPAGMMIGTDSHTPNAGGLGMLAIGVGGADAVDVMTGMEWELKIPNIIGVKLTGSLSGWASAKDVILKLAGILTVKGGTNSIIEYFGEGASTLSAAGKASICNMGAEVGATTSIFHYDNNIKEYLISTGREEIAKLADENINNLKADEEVYNNPEKYYDKIIEINLSELEPYLNGPFTPDAACTISEFAKKVEENKYPTAMEVGLIGSCTNSSYHDLSKAASIARQVIEKKLKVKAKIIINPGSEASYNAALRDGIIDDFKKIGAVIMTNACGPCIGQWNRQEPDNTRANSIVTSFNRNFAKRADGNPNTHAFVASPETVMALSIAGDLRFNPLKDTLINEEGKEVKLDAPVGIALPKNGLNTENKKRQNAPDSNIEIIIDKDSKRLQLLKPFDKFNINDFNNMPLLIKVKGKCTTDHISMAGPWLKFRGHLENISDNMLMGAVNFFNDKTNCVFNQLNNSYEEVSKTAKEYKNKNISSIVVAEENYGEGSSREHAAMEPRFLNVKAVLAKSFARIHETNLKKQGMLAITFKDKEDYNKIQEKDKITILGLDNFKPKQNLTVKVVHENGNEDTFEAVHTYNEAQIEWFKNGGALNSLMKN >gi|343386388|ref|AEM21878.1| hypothetical protein, 1425434..1425958 [Brachyspira intermedia PWS/A] MKTKILLSLFIISLISSIAFAQPPAPDPANEPRYRYEATPRDREPVPPAPRDREPVPPRHRPGARGDIYRMCRNAGIYLTDEQIDEMSKIFYEYELKINDLEYQKRNIDYKFKLEREKIDIDLNLIKDLINQKKDLEKEIDYLRIEKDVAVLDVLTDEQLAQLNSYRMRYYYYR >gi|343386389|ref|AEM21879.1| large-conductance mechanosensitive channel, 1426084..1426281 [Brachyspira intermedia PWS/A] MIKEFKKFIMKGSILDMAVGLVIGAAFTKIVNSFVDDILMPPIGMILSGIDFSNIFIVIKKVLIL >gi|343386390|ref|AEM21880.1| sodium:dicarboxylate symporter, 1426923..1427969 [Brachyspira intermedia PWS/A] MIVSYVSMGIADLKEGSGFLLLVTCALAYGSTLIAGSASFLVAFNLFPSFMSADDIQKIAAAAGNSVSPYLSITVTPLLDTLAAVLFAFIIGLGISSMRGKEIGDYLYNVFKELSTIIDKVLRVSIIPLLPLYICGTFVDMTRSGKTFVILGILWKVFIVVIIMHLLYLLIAFLVSGSIGKKNPFMLMKNQIAGYATALGTQSSAATIPVNLQCAEKDGISEQIRNFVVPLCANIHMAGSMITITACATAVCLMNQIPITYSTILPFIAMLGIAMIASPGAPGGSIMTALPFLYMVGLGGPDSPLSAIMVALYITQDSFGTACNVSGDNALGVIVDTIYKKKVVKTDA >gi|343386391|ref|AEM21881.1| hypothetical protein, complement(1428069..1428920) [Brachyspira intermedia PWS/A] MQIVISVIINIVILAVTLPLFYIYIVSKARERLEKETMSKAREEIEALVKEFNNIALSRISILEDSIVRANRLVKELNNLQNGKKDNNINKSPAVKEEIKTEENTNKQEEKKLDVSVQEAQNIESNNSNKNVVMNNENKKLDIRVEDNNIKINSKAERKENTEKIEKAEKQEKKEETVKPKPKKSNIDTAAKAIDDEARREVIEKLRSKLDRTIKTNMAIYDKPIEDKTIALVNDPLDSTAKDYNKNDDIIKLYKQGLSKEEIAKKLNCSITEIDIVIDLNLD >gi|343386392|ref|AEM21882.1| hypothetical protein, complement(1428941..1429306) [Brachyspira intermedia PWS/A] MPIAPLDLQQLYMQQSHIGRMEHTRMAAKTIAMQSEDRDIHRDSYIKDSTVVKSENISDETRVKEKKDEQRPKDQGYMSYRKKNKKRMTDDTDNNEGNNTIEIEEVSATERTKGSKIDFLG >gi|343386393|ref|AEM21883.1| RNA methyltransferase, TrmH family, group 3, complement(1429453..1430163) [Brachyspira intermedia PWS/A] MFITSKNTIVEAISKDLVQTLYIKFPVSKREKDIIKLAEKKKVPIKNVDKNEMEKIVGKIYSIAADIKENVEIGIESFIEKAFEKRENPLIFILDSITDVHNLGAIIRNAYFFDVAGIIMPKDNSAPINEKVYEISEGAAYHLPISIETNLNRVIDLMKDKGFWIYYASEKGETSLEDFKFNSPTAIILGNEHSGVRDILKKNSDGSVIINSATDFDSLNVSAASAIIGYAYSIYK >gi|343386394|ref|AEM21884.1| Long-chain acyl-CoA synthetases (AMP-forming), complement(1430259..1432136) [Brachyspira intermedia PWS/A] MKNYTSIPSAFFETVQKMPQSPAYRYRDNNEEKVTITYKKLYDKVNAIAKAFDVKGLSKKHVAIFSENRIEWFISDMALLALGSADVPRGIDSTSDELNYIIEHSEAEAVLVENEYVFKKIEKHHKDLSLIVFLDSSKHDPDNNIYSFEKFLELGEESLNGDEEFAIKKASKLTNESTATIIYTSGTTGKPKGVILTHGNILHNVRVLPDIIKLQPGEKLLTILPIWHIYERTISYVTAIIGCFTAITNKRYLKNDFTEERPDIFISVPAIWVNIYNTVMKNIDRKSTFARNLAKFLIKRSIKYIRSVRFQNDLVYLLGDEHKSDKKSEYSIGIFDPIYHKMATKMVYSKIKELTGGKMRLTISGGGALPMYIEDFIEAVGINLVVGWGITETAPVVTLRSPFKNYRGTCGAPVPEVKIEVRDKEGNICKDGVMGVCYIKGPNIFKEYYKDPELTKQAKVDGFFNSGDLGTYTQQGEIVLTGRAKETIVLLTGENVEPQPIENKALESPYISQIMLVGQDKASTGAIIVINKENIKEHFDKQKISYDEKTLASSKDVYKLMREELDNLINYRNGFRPYEAIAKMIITDEEFTIENGLLTQSLKIKRANVMEAYKDKIDALYDKVK >gi|343386395|ref|AEM21885.1| mannosyltransferase, complement(1432217..1433341) [Brachyspira intermedia PWS/A] MNNIKKLAILHPTFGYNGGAENVILAFSKYCHSLNIEITIYTYRLRDDVPNYIKQIKTDIKLNPFIFNKTSKFLANELINYDAVLIHNFPATIFFGLASKYAQKNNIKLPKSFWYCHEPSVRLYGHDDESYKKLQKTWDIIARYTMHLDRLGVSKIDHIMSNSIRTKEAVKRVYNREAEVIYPCITDTENIMPINKGKHFVYVGRIEKPKNLENAIIAFKSFIEKIEDKELKFIIAGKGRHENYLKKLTEKLNMNNNIIFKGFVSDEEKKELLNKSYALVMPAINEPFGLTVIEALYSSCISIISNKSGVYEIVKDLSISCNMENTDEIITSMLLAYKDKNIKNNIIHSSKSILNIFTVSSYSENVIKYIVNHL >gi|343386396|ref|AEM21886.1| methyl-accepting chemotaxis protein McpB, 1433503..1435737 [Brachyspira intermedia PWS/A] MKLNSLTFKIPLIMGLSITLSIFVITVIMFLISLKSVDIAAQNGFETTAAAYEGTANLWIEHQKSIIESFATNESIVNYLLSADEYNTQLASNTLIGFKNYRNASLHFTILNREGKVLLDSENGSLINYNNGYDSDFTLYKNNTAKMGIVKSSITGDVVYKMYADIKDNNGNVIGVLSSHIDWSDFIKHCISFAKIGNTGNIMIVDEDKNIIAHKDENQILNSLKDFKALDDMTVLKKSIKHYRDNDNKLYMMYFSPIIYPHWYIVATIAESELYSPVNSMLRHPIYIAAILILLSIIMIWIFSKYITSPIKEIVKEADNIANGDLTTIISKKHLNRKDEIGDILNSFNKMKKVIKDIIKVVNSNISQTKRTAYSLYYSNKDLSERTISQASDINATTSFMKNISLSIDESTSDMKSMSDGMIDAKNEINNAGSIIFDTAKNTELVFESSKKIGDIIKIIEDIAFQTNILALNASVEAARAGEQGRGFAVVASEVRNLALNTSESAKNITSLIEDSNDKIKKATDSANMSQKLFVEIEKKIENTTNIMKDVVVKINKQQEDVSKINNSMLSIDAKTKDNADLVELMKNSSSELEKQTNNFFSAISFFKTGVHHLDWSENYNTNNEHIDEQHKKLLNFINDIYSAIYEEDAERVKNVFNMTLDYTKYHFSDEEKLQKENADRYKKIKEHFEQHRSFENLVTRKIDELNTSNDWKNTALDMANILSKWLIQHIGVWDKEFVKMVGI >gi|343386397|ref|AEM21887.1| methyl-accepting chemotaxis protein McpB, 1435960..1438224 [Brachyspira intermedia PWS/A] MKIYSLRFKIPVLFITAIVLSILLSLGVALFFSTKAIDDAVESGFESTSISYKNLINLWLEDNHSSMANFVTSQSLINFLLNTQDETLKVSAEEALKYFKTSKRSFINFILLDLNGNAILDSENGILNNVTMDRNDEGWKKFVSSGYNSGGEASVSKSVATGNPTYRVWAGIKDNTGRVIGVLSGNVDWSDLINGYILNVKIGETGKISIIDGNKKILAHNDNARILTTAGNNIPYDEVFKNKNGIMHYKDSSDNQKYLMSYYNVDNTDWYIIITMLEKELYSSLGRTIIFSILFGIAIIIIVTIVIVGFTRRLTSPLKEALRLANLISKGDLTFEVNNKYFGRRDETGELIKSFDNMKTSIRDIIDVANSNVALTKRTAYSLSYSNKDLATRTLNQASDLEKTAEATEEISSTIKKTAENAAIINDMMIDARNAVEEAGSIIAETAQNTSQAFEYSQKISGLVKFIEDIAFQTNILALNASVEAARAGEQGRGFAVVASEVRNLAQTTQSSVNNITSFITESNEKVKKATDSANMSRTLFEDIESKIEETTRVIADMANTTKEQLIGIDSINNAMSNMDAQTQGNSSLVSSMHESSKELEEQMEELSNAMAFFKVGAKKLEWLDQYYTHNKTIDGQHVQIIEYANKVHSALYNGVKEDVDEAFKGAINYTKYHFSEEQKIQVANKDKYHKIKEHFEEHRKFEKAIDDQYKAFKSSSDWRQVAIDFSELLAKLLIEHIGVWDKEFVRIAGIQDS >gi|343386398|ref|AEM21888.1| hypothetical protein, complement(1438296..1438784) [Brachyspira intermedia PWS/A] MSKVLKQSKAVLVTALMYNNINIYNSVLEKLVNNFGEIEVISDEYLFSHSAYYKEEMGESLNKRFIVFKNMIERDYISDVKKITDSIEKEYSDENNNRKINIDPAILTLENFILVTNKNFTHRIYLKDGVFADLTLIYKKKKDILNWNGLMQIIQAMKQKSF >gi|343386399|ref|AEM21889.1| serine phosphatase rsbU sigma factor regulatory protein, 1438970..1440745 [Brachyspira intermedia PWS/A] MDIYDIVDDPEKQLEVFSGIIKRMNASNDHDETLITIISEIKTIMYTDSILLYLVDQELYNLHYEMSIGPLGSKFFGNIIDCEKPLAVRAYTTSCSLYSNDPQEDSAFIPMKEILGEDLKNILFVPLKVRKKNIGSLFLINKKNGKFIEKDTVVMSLFANLVSLALVNKMVYDRAQSRAYEVGALYQMSISINKCETIEEILNDNISIVCEAFEVHRVSVILKENGVFKFKAGIGIDENVLKYGVVTVDDNVLAEVLRTGKPVYSIDVDRDIRFRPNKNLRYTRNSFMVAPIVGKDEIIGFLSATERNINKAFNLSNLSLLEMLAQQIGENYMHVLLSEESKIKESLTEEINFTEQLQKSVLPKEFPSDGLFDIAAVSIPSKNVGGDFYDYIKISDTKYALVIADVSGKGLGAGFFMTMTRSILRVYFSEMDDPAKILESTNKHIYKDSNNGMFVTCFLLVIDTENKTITYSNAGHLSQFLIKKYSISTLDSIHELHTHGKPLGFIENATYQNKQISYSTSDTIILFTDGITETFNQSEEEYGEERLKELLKNDYDNAKELLDDIVNETISFRGKTPQFDDITLLVARLLN >gi|343386400|ref|AEM21890.1| hypothetical protein, 1440840..1441838 [Brachyspira intermedia PWS/A] MKKIFLLITIMSLIIIQCGNKTDTQTTAANTNESAHSDNTIPASKILSQTDAAFLEKVKNKIVIDRNSQYTFKDNGDIEYVYDSGDYREEKNYIFESSKDGTNAYYYETYNIQDKYKEGPSNMATNYEGFSVINGILYEDNYEGYEGDPIETIMVKWEKENYYSNYYYREVKENPNFDNFPYENKADVTFDEYNRISRGILISKSDYKLEEVGDISMYNFDNVYTNGYNASIELKKNDDGTFYFYAINVTTDENGQTVTNIQSTDTDKMVLEENQYVEPYCEIFDNSMQYGEVYGADGTYMIDITPISSDALVLVENNGSYGFSGVFKKKSN >gi|343386401|ref|AEM21891.1| hypothetical protein, 1441999..1443498 [Brachyspira intermedia PWS/A] MKKIFLLITIMSLMIIQCGNKTSSDNQTDVNTNTVNTNEAVLSNETIPATKILSQEDAAFLDKVKNKIIISGMAKYTFKDNGDIEYVYDSGSYREDKNYIFESSKDGTNAYYYELYNIQDKYEKGPSNIATNYKGFSVKNGILYEDNYEGYESDPNETIITKWEKENYYSNYYYREVKENPNFDNFPYENKADVIFESYNERQQGILISESDYRPEEVGNINTYNFNGIYSNNNASIELKKNNDETFYLYAVNITTDENGQIVTNIQSTDTDKMILQENQYVEPHCGIGSHTLDYEETVGMDGGYIISIQPINADTIMVTEPNGSYGFTGIYKKSPEMAAAIDSNDKSTKEKAYYNACRWYAENYSELSDIFNKIVDFDFEGGGYYEINMENVYLYIAKFKNSGYFSDNYIKNLENSFEEIKKNLEENKQNDGSVEGMEADWFLATQEIDYYLNIITNEMKLKDIVPYGDEGDALCISNEAGESVILEVKKYGDEWLIE >gi|343386402|ref|AEM21892.1| hypothetical protein, complement(1443935..1444069) [Brachyspira intermedia PWS/A] MISKRRNKMSDYEYPKSPEKTIFIKNGEGKNLKEQKNILQEMLK >gi|343386403|ref|AEM21893.1| flavodoxin, complement(1444073..1444576) [Brachyspira intermedia PWS/A] MKALIAYYSHSSNTKKLAEFIGKVIKSEFANAEIDFFYTEPEKPYSSSYNTVLNEAKRDINSNIKPKLKNNIKSIDDYDVIFIGSPNWWNTIALPVNTFLNSFDFSNKIIMPFCTHGGGGSGSIKRDIEKESKSKQVSKILSVYGSSASSAENEIKKWIKDIFVKIK >gi|343386404|ref|AEM21894.1| aldo/keto reductase, complement(1445219..1446196) [Brachyspira intermedia PWS/A] MKKRMLGDLEVSAIGLGCMGYGVVYDENYDKTELISLIHEAVELGINFFDTAEAYGPYKNEEIVGEALEKYRDKVVIATKCGIKTVNGKPVLDAKKETIRTSVEGSLKRLRTDYIDLYYLHRVDANTPIEEVADTMKELIKEGKIKHWGISEPGANTIKKADKVCKLTAIQSEYSMIWREPEKEIIPLLEELNIGFVPFSPLGKGFLTGRFNADSEFAKNDFRSSVPRFQKENLKQNQVLIDILEDIAKTKNVSKSQIALAWVLYQKPFIVPIPGTRKIERLKENIYSINVEFTNEELNKINEAISKITIQGERYPKEHLEIVGR >gi|343386405|ref|AEM21895.1| oxidoreductase, aldo/keto reductase family protein, complement(1446259..1447158) [Brachyspira intermedia PWS/A] MKNIFISFLLIFITVLIFNNKAEANNMKGNFNFNTKTVKLNSGYEIPLNGIGTYSLLNDVCYNSILYALQNGVRLIDTAYIYNNEEEVGKAVRDSKINRKDIFIITKLYPNQYNDAEKAINDALKKLNVEYIDMMLLHHPGNNDVEAYKAIEKAIKEGKIRSVGLSNWYIKELKDFLPKINIIPALVQNEIHPYYQDTEVIEYIQSLGIAVQGWYPLGGRGHQKELLNDKVLKDIAKKHNKSVAQIILRWNLQRGVIVIPGSSNRSHIIENTEIYDFELSDDDMQRISELNRNEKHDWY >gi|343386406|ref|AEM21896.1| oxidoreductase, aldo/keto reductase family protein, complement(1447697..1448542) [Brachyspira intermedia PWS/A] MKKVKLNNELEMPILGFGVFQIPDYEECKKSVLNAIETGYRLIDTASAYNNEKAVGDAIKESGVDRKELFITTKLWISYAGYDNAKKAFEVSMNKLGLDYLDLYLIHQPFGDYYGSWRAMEDLYNEGKIKAIGVCNFYPDRLLDFVMHNKITPMVNQIETHPFFQREEDNKLMKEYNIQIESWGPFAEGRNNMFTNEVLKSIAKKYNKTVAQVILNWLIKRNVVVIPKSVHKERIIENFNVFDFELDDNDMKEISKLDTKQSLFLSHTDIETVKYLCNYKI >gi|343386407|ref|AEM21897.1| hypothetical protein, complement(1448803..1449210) [Brachyspira intermedia PWS/A] MTACNSVYGDNTTTMNTLNTSINLKINNKEYKLILYDNQTAKDFLAMMPLTITMNDLNANEKYHNLSKNLTTQSSRVGSIKTGDFMLYGSNCLVLFYENFSTSYSYTKIGYIENASGLKDTLGRGSVQITFSVNN >gi|343386408|ref|AEM21898.1| transcriptional regulator, MerR family, complement(1449264..1449644) [Brachyspira intermedia PWS/A] MTIAEVSKKMELSTDTLRYYERIGIIPEVERSESGIRNYTDHDLVWIEFDKYMRSAGMGIESLIEYIKLYNKGDATLEARKQLLIDQRETIVNRINELKETLEKLDFKIQNYDTKMRECEKRLSKK >gi|343386409|ref|AEM21899.1| hypothetical protein, 1449906..1450622 [Brachyspira intermedia PWS/A] MSDLSFRVLDWDFFAPNMDKSFILENINNDIKITYGDSNPDLDFIPRAQKRRLSQITKFSFESIKNILKENEQIPIFFVSKYGEIKQQYNMSKKIVTEHEVSPALFSFSVFNTAVAQLTIFYQNHERAIAITCYNNFIDTALIQAMAFLKTSESDKALILIADEKLPESYEEISKDGNYSFAFSCLISKKDPNIDIDVINREFDKDENSIIDFIKFISTDTADLELGKIKLIKNNIFY >gi|343386410|ref|AEM21900.1| acyl carrier protein, 1450659..1450826 [Brachyspira intermedia PWS/A] MSIEDQIKQIVIESANLEGVSIEDIDTDAPLFGDELGLDSIDALEIGVAIRKNLI >gi|343386411|ref|AEM21901.1| AMP-binding enzyme, 1450927..1452273 [Brachyspira intermedia PWS/A] MRKLSNTNFYSLKDSEDIFLIHKENKNFIKYKEFISDIVKSLEYISKYKEDTITVFIEDAYRFIAVITAGFILKKNVNVLNNNSPKYVESIIDNTMVYISDTENSALNLDEVFESKCNDKWFDLLKETIIDENVYVNFYTSGSTGYPKLIEKTLKQFEAEATKIVNQFTDNIKDSLFLYTVPHYHSYGFVFAVLVPFMLESKCINNRINYLETVNNFADYEKITIVTTPAFLKRIDKSSLKIKSKWYLFSSTGMLEEKVNDLCKEIFGTDVTEIYGSTEAGAMAYRRRSENQLWTRLSVVKLKVDENGSIECCSGYTGENVWIHVGDVVNMKNGDEFELLGREDSIVKIEGKRISVQQIDRQILMDKRFKDSYTIYCKSDKREYIASFIVMNNKDRNSEDMKKYVIDYLKGYFETVVLPKKIYFVDSIPRSEIGKIDRKALDAIMEGN >gi|343386412|ref|AEM21902.1| beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ, 1452275..1452607 [Brachyspira intermedia PWS/A] MSSIDYTIEEHTPDMFKAKIFISDNLFYFDGHFEKFKLLPAIAQIKIITDISKNVFHKELVVNKLLKLKFIDMILPNTNIFIECHLSDNIISFKIYDDNKKYSDGKVYFS >gi|343386413|ref|AEM21903.1| glycosyl transferase, family 2, 1452620..1453582 [Brachyspira intermedia PWS/A] MAHWTEEKEIGKRWKALFSVFVYKILGRTFIILYLIPISIVYFFYSKTRMQASREYLKKMSKYNKKIKSNFICSYKHLLSFVVSISEKFSAWNGDIPMTDLVVKTKDSYNEVIDLLNKKNGMIILFSHIGNIELLKGLAAINEGNPIKDYKINIIIDPKVNKNVNIVLEEGKNNSYIDFIDASNIGPHTIISIEDKLNNGEIVAIAGDRTTNKTDKVNYINFLGEEAPFPCGAFLIPILLRYPVYYFFALRENDKILAKKYNFYIYPSKIKLNDEELKNRKKKNEVILELTKEFASIIEEKAIEYPYQWYNFHDFWYKGD >gi|343386414|ref|AEM21904.1| esterase, 1453586..1454011 [Brachyspira intermedia PWS/A] MAAKKCYLENDYYIKPSFYDLDPMGVVWHGNYIKFMEQAREAMLEIIDYNYDIMTAKGVMWPIVKLEIKYINSIKLNQKVRIHTAITEYLNGMRVEYTFYDENNKIISKSSTLQMPIDSETRKGFLNSPKDFIERIERINN >gi|343386415|ref|AEM21905.1| outer membrane lipoprotein carrier protein LolA, 1454207..1454776 [Brachyspira intermedia PWS/A] MRKIFIIFMAMASILLCQVKDEYKNAKLLKGSYTQIVSQKGRSFESSGDFIVVSGYGICWFTKSPKESITVMGEKNVVQIMPDGKKKVMADSNNAMFAQIANIIKSIFTYDEKTINESFNKSVNGNIIVYTPKTNELKKIIEKIEVTFANAGYIEKIKMYSSNNSTTEYIMKVLSKSNRITSEETKYFE >gi|343386416|ref|AEM21906.1| hypothetical transmembrane protein, 1454895..1457075 [Brachyspira intermedia PWS/A] MSITPKFLEDKDFQKPLEDFFFKNSSSVKIFIESKYFDNAKSNALKLDEHIKESYTNVSVNLYSKNYDDILNTMVKYKYQLLSKEIRNYLLNDEADIVSENALANFYSPFFIPIVDNIEDDPFLTVNSKINEILTSENNLQSRDSIQFINYDDKYNILVNIDMPKNLDNEKFFDDITEYLKVLENEGNIKTYISGVPVHTYYSQKSAKFEITIISIVSFIVICLIFVFIFKSLKPYIISMCTILISGLSAFLYSSVFFDSIHIFTFVFGTSLIGISIDHSIHFITEWYNEEDKKEVLKKIFPSMLLGFVTTIVSYLSLSLTSLILLKQIALFSIFGLLSSFLTVNIIYPLLFKNDKSVIKKSILDKSKNILNDYVKIISIRNVLIIFVAIIIISIIFIPKIKVNFSANQLYNTPDFLFNSEKEVYNRLNTSLAKNIIISRGDTLSKALSAEESIANNFSNNNYTAISKILYSEERQKDNVKLVNDKLMPILRKQTEALNLDEISYQRIKSEFENTKNEVLDINKILENTNFNDLNKIIVTNNNRYFIIATSDYNTNNIIKSDNNDVKIFNINEEINDALDGTAKTAVKMALIAYIIIFIAMIIFFDTSKAIAIIIVQLMSILINLSVHSILGININIFSIFALILSIGISIDYSIFFSNSAADKEITFLAVFLSMMTTVLSFGTLAFSSFIPVKSFGLFLFIGILSSFIISPVLFNFNKLIKNNND >gi|343386417|ref|AEM21907.1| 3-oxoacyl-(acyl carrier protein) synthase I, 1457187..1458299 [Brachyspira intermedia PWS/A] MYNKYFLNGEYGLKENNDYVKKFFLGKIDNDFFNFELDNPYNNKINKMALHAVNQLKPIIDEAKKRYGKNRISVIVGTCENGSDETKDYILKGSVIDEKKILIMQSLNICCDFLQKYFDVSGISFTISTACTSSANAIIAADELIRSGVIDAAIVGGADVVTDTVVYGFDSLEVVDYNKTNSFSKNRKGINLGEGAAFTVLAKDNLIDSKNVLYLKGYNSNSDSHHMTSPDIDGTTTSKCINDALKHADMNINDIDYINLHGTGTSINDKMESTTLNIVNASNIYCSSSKTSFGHTIGAAAAMELGVCYITLSDINKEKILPPHLYDGEYDDTLAKINLVTGKVKSERLENCMSVSFGFGGSNTCLIVGK >gi|343386418|ref|AEM21908.1| FabA FabZ, FabA/Z, beta-hydroxyacyl-acyl carrier protein (ACP)-dehydratase, 1458318..1458806 [Brachyspira intermedia PWS/A] MENKYKLNIPHKGKMLLIEGISDINFDNKEILSFANINKDNIFYDISEPEGIESYIFTEYAAQTAAAYNGALSNNEDNKRIGFILNIKKVNCYINKIKSDNRVYIFVKETFNDKKIAYYDGEAIFYNDDINTLDEYKKIVNDDNKIMDCSIMVMESSADVFN >gi|343386419|ref|AEM21909.1| 3-ketoacyl-(acyl-carrier-protein) reductase, 1458832..1459560 [Brachyspira intermedia PWS/A] MKNKSILITGASGSIGFAISKKIIENGYDAVMCYNKNDSFIEKIKEFAKDYDVNIRFLKMNITDREEVKNILTKDIEENGAYYGIVLSSGITMDNAFPAMSGDEWDNVIDVNLKSFYNIVNPIIMPMIRNKKGGRIIAISSITGIIGNRGQVNYAASKAGLIGAVKSLAIELGKRNITVNCIAPGIIESEMINDEIIEHAKNMIALKRIGKPEDVANAVNFLLSDEANYITKQVISVDGGMY >gi|343386420|ref|AEM21910.1| ankyrin repeat-containing protein, 1459650..1460318 [Brachyspira intermedia PWS/A] MKKLINIIFIFALFFNVSYALTDNESKFLKSCEEGKYDAVVAFINKKVNVNVVSEDGVTGLMLASHHGHTAIARLLVNSNADVNVSDKVGYTALLMAAAGGYHDIVKILLKAKADVNAANSYGETALHIASYKLYADIVKTLIDYKVNINAINNDGDNALIMVFMSADKSENMLPVAKLLCDNGIDVNARDKNGRTALTYVKNNYKKPDTLIAFLTEYGATE >gi|343386421|ref|AEM21911.1| Phosphoheptose isomerase, 1460380..1461006 [Brachyspira intermedia PWS/A] MIEELIKRIPKLENIKDNIESAINETIKCYERGNKVLIAGNGGSACDSEHIAGELLKSFLKKRPINEEIRKELLQFDDGQYIADNLESPLRAVALTSHLGLSSAYLNDKEPYLVFAQQLLGFGDKGDIFFAISTSGNAKNIIYAAKLAKAMGIKVVSFTNENGGKLAEMADIAIKAPAKETHITQEFHEAIYHEICIRVEENFFKENR >gi|343386422|ref|AEM21912.1| protein of unknown function DUF534, complement(1461114..1462097) [Brachyspira intermedia PWS/A] MKNNKTIIFVLIIIFILISSFTISKKYMYPKNETDEVITIGISQMIEHDALDLIYKGIADELNKYYKDSNKKINIDYQNAQGEQANCNTIAQKFVNDKKDIIIAIGTPSAQSAVNLTKDIPIIVSGIGDPIGAKLVTNLNKPNVNVTGIINLPPIAKQIELMHTLLPNAKKIGLLYCSSEINSAYQIKLAKEKLDSIGLEYVDLTVANANEIQQIMLSAVNKVDAIFSPTDNIIANSMANVAMIEESTKIPVVCADASMTKIGGTVTYSVDYYDMGVSTAKKTIEVLEGIKDIKNIPLEPSENYNFVVNTNMINKLGISIPNDIYNN >gi|343386423|ref|AEM21913.1| lipopolysaccharide heptosyltransferase II, 1462280..1463323 [Brachyspira intermedia PWS/A] MKILLIKQTSLGDVLHMTPVIRALKKWKPDCTIDVVTDKRALGILENNPYINKLYVLDIYKYETEIFKSPLLFFSTIKEFFSHIKEVRKEHYDIAMDLQGLERSVIFLYLCHSKKKYAKGKWLGLKSNYYKDINAIVGLLSFLKFIDCPDDGTDLDYFLPKNIDIDFAERIKDIKYSINSNFAINNEYIVFSPFSRWDTKDLSVNKSREIIKEIQKLKDIQIIVSATSDYNEKCDEIVKGFDNVLNSSGLFNLPELAYLIRNSKGMITVDSFPMHTGCAFQKPLIAIFGPTSEVRVGPIARNSETIRVENLECARCYKRKNCPNNHICIENIDAEVLAKRFIEKLQY >gi|343386424|ref|AEM21914.1| metal-dependent hydrolase, 1463371..1464129 [Brachyspira intermedia PWS/A] MKITFLGTGTSDGVPMIGCKCRVCRSKDKRDKRTRSSILIRHNDKNYIVDTSADFRAQMLREKVDSLEAVFYTHSHADHTSGIVDLRSLNFIMHTAIDCYGNKDTMDTLREKYDFFFNPVQLGGGLPQVVFHHIESEMMFDDIKVTPIAVKHGVLNILGYRFNNFTYITDASHISDESLKLIEGTEVLVLNGLRYRQHHTHLSLQESVNIADKLGVKKAYFTHMTHDVLHKNLEKELPPNMYPAYDGLSIEV >gi|343386425|ref|AEM21915.1| hypothetical protein, 1464192..1464860 [Brachyspira intermedia PWS/A] MKKLVASLFFMVFVSINAFAQHGGGVALFVPLTGSFAFADLRGLDNSKIDILKSSSSFDFGVLLQPGYFYDFGGLLGFDVLADIGYYRSSYKYINSQDARIVSYTFDTLNTGAMFRVTFLVLSLGIGAGAKIPLAANLQDGDYNAKLNTDEIKKSFTSAVIPYLKFTVDFKYNLSSFAAIAAGLYFNYDFAMNYKHPNYSRYNIHSFDFGVQIGTYLVGTSY >gi|343386426|ref|AEM21916.1| magnesium transporter, 1464912..1466270 [Brachyspira intermedia PWS/A] MLKELLQPEIEDLIEEKEWDALTDILPLWQEVETANLITSLKNDDKYKVFSILPHEYYYKVFPELAPIDQQRIIENMQEADIKDLLENINPDDRTYFLASIPESMSENILKLLGSEEREIASWLLAYPEGSIGRLMTPEYISIKPDWTVSEAFEYVRSNIAESETYTTLYVTDARRTLIGSIALRKLFFTDKNTLISEITNNCPYISVYDDQENAIDVIKKYNLHSLAVVDDRHSMIGIVTVDDIMDIAEEEYTDDFHKMAGITSSEDQFDDNLKITPISTLYKQRILWLLILVFINIFSGGVIGIFQNTLQKHIVLVVFLPLLIGSGGNAGSQSATLVIRSLAIGDVVLKDWFYMLSKEVLVASMLGLSMALGAYILGVIRGGFEIAAIVSISMFSIVFIGSVIGLCLPFILTKFNIDPAISGAPMLTSICDIVGTALYCSIATIAFVIFF >gi|343386427|ref|AEM21917.1| ankyrin repeat-containing protein, 1466386..1468023 [Brachyspira intermedia PWS/A] MREIEIELHEASAKNNVLAVEILLKNKDIDINLSNILGLTPLMHACKGGYKEIVELLLNAGADPNKADQLYITPLMNACANGHKDIAEILIKNGALVNLSNCNNETPLHYSCSENHFDIIKLLVENGADVNAKTDINITPLMYSCQKSNFEAVKFLIDNHANLDDVDIYEETVLSYAISSGNIDIVEYILNKGDIEIPKYSLTIAAISGNLSLVHYIHSKLGLNKHNVFSSAFISAAYNGHLDVVRYFFDNSKKKAPKALAIAASAGHKDIVKYLLMNKVQPDGVTDNGKSALILSIEIENKEIIDLLIKHNVNVNQADDDYVTPLMYACYIGNIEIVKTLLDNNADISAVDSLERNAIIHAVIAGNIDIVELLLMHGMSLKGDGESITPLMWAVIYDNLKSVKYLIQKGIDIYQTDINGWNCFMFACAKGYDDIVKYILELYPDIIDNKNKLGETALMIASDNGKTEVVDYLLKNNASIKEQNANGDTALYIASSKGYFEICEQLVKYYEISDSSKNIFEKEYDVAKEKGYSSIINLFNNKLKS >gi|343386428|ref|AEM21918.1| permease of the drug/metabolite transporter (DMT), 1468105..1468980 [Brachyspira intermedia PWS/A] MANKERLGTIGIFLTALIWGYSFVAVKVVVKEIEPFYLVGIRNLAGGIFLSLVFFKRIKNISKKDIIFSAPVGIALFLGFFLQTMSSKFITASKVAFFTGSYVIFIPFFSWLIYKKRPHISAFIAAVITVLGLYLLSSFEGFSSIELGDLLALLCAIVFAVHLMLIDKMLEYVDGIIMAALQLIIAGIVSLFVGAITSTPFNVNVSSEAIYSLIYLAIGATGIAYLLQTVSQKYVNPSKAGIILSLESFLGALGGVIFMKDPVTINFVIGGICMISAIFICEIGSSVKKES >gi|343386429|ref|AEM21919.1| phosphotransacetylase, 1469346..1470353 [Brachyspira intermedia PWS/A] MASFMDNLKEKAKSNPKTIVLAEGYDERHVKAAVILKKEQLVKGLVLVGDTAKIQGLAKENDLNLDDGFVKIFDPTKEAITEKYIEMLFTAREKKGMTKDHAKDLITNHSIYAAAAMIADNDADGMVGGAVYSTGEMLRAALFLIGLKKGIKTLSSTFFLESPDKSLFTNGISCFADCAVIPEPTPEQLADIAKATAESYRSMTGNEPKVALLSFSTKGSAEHESITRVREAKKILDSQEVDFVYDGEMQLDAAMIEKVAAQKAPGSPIKGDANVFIFPELNSGNIGHKIAQRVGKCTAIGPMLQGIAKPANDLSRGCSAQDIADLAVITSLQVK >gi|343386430|ref|AEM21920.1| GGDEF domain protein, complement(1470589..1471584) [Brachyspira intermedia PWS/A] MENRIEVIKKDSTLLEVASLVSKSSNKILAVINDSDKIIGIVNYNELLVNILKNANKKDSKNIFNKEISSFMNKNLIVAHPEDDISVAFDIMKENKIDYLIIINNDNYPIGIVNIYDIYETIIKIRMRSMSIAINEVEKKSSMEKDKVIKKLMKEIDTLHAQSTIDPLTGLFNVRYFNKIIEEEVERAKRYKYSISIIFMDLDHFKDINDIYGHDCGNVVLHEIGRLLSNSSDNINMLRKSDIAIRYGGEEFIVICPNTKKEQAYIVAERIRKTVEKKRFAYESTIINVTVSVGIAEHKGTSKKPIAETIKNADTAMYEAKHLGRNKVILH >gi|343386431|ref|AEM21921.1| toxin A, 1471792..1472676 [Brachyspira intermedia PWS/A] MKKVNILIVLVFIYSKIVFADINTIFNMDIYERKLAVNTNTGIYSNELFIEQTALGGFNHIKFNLETRLYYRLYFYKNATNFLFKDTKVDFGIENNFSLSSDMVGLYVDVKPLSFLGIRVSGYADFMFNAMNFGYAGFDSKDVSYSFDELYAMEKGNAFGYIINISPYFIFKFNNFILINNLNMSYVNVGDKKYYYDPRTSILHAKSEFELINDFYLLGKISVFYIGGYYGLTYLINSKHLSHKFGITGIINFNFLKETLIFNVGASAGLHVGLPHYNNTTFIELKMSLGYKIL >gi|343386432|ref|AEM21922.1| putative Cell cycle protein, 1472692..1473786 [Brachyspira intermedia PWS/A] MISRKLFPDKYLLIIYIALLVAGLVSIYGAQTIHEPNTAYFSNHLKLLSFMLVFTIIIMIVPDFFTVLDKMVPLILLFTLILLVLVYFFGITVAGSYAKRWLLLPFGITIQPSEIAKITCSIYFASVLSKKGEKLIDIKRGLFPPLSILIIVSGLILIEPDSGTALLFSIVGFAIFFYGGIPLRSILLSGLLLLILFLIFIFNTPYMRSRVVSFLDPQSQPEEEVYQIRRAKLAFNYGGVTGIPDEYIADVSTHLPAALTDFIYASVSQRYGLVGNVIILLLFLSFTIRGFIISSRTKDLFLKNLSFAITMFISVQAYLNIMVATLMLPTTGMTLPIISYGRNALVVNMIMVGILLKITQRREQ >gi|343386433|ref|AEM21923.1| N-acetylglucosaminyl transferase, 1473783..1474772 [Brachyspira intermedia PWS/A] MNVILCGGGTAGHITPAISIYDYMKKEGHKPRLVVAQKDYPLIPSNYDFNTININSPGNFFKKIIFMLKFIPALMKSYNIISRHKPDCVIGMGGFVSFPMLYAAKTKNIPIFLCEQNSIPGKVNRIFYKNAKRAYLTFSKTLEFMPNGKVFGNPVRNDFFVVHRESARSVMKLKEDDKLLVVMGGSQGALKLNELFFECIKDIKAKVNNLYIVWLAGPKWANDIIAKVNSAKFENVFVHSYYKDMANLLHAADFVISRAGSSSISEILAVNVPSLLVPFPYATDNHQYFNALDLLNKDMAYLIEESDLDKEKLENVIVNNLNNEERLKK >gi|343386434|ref|AEM21924.1| UDP-N-acetylmuramate--alanine ligase, 1474887..1476275 [Brachyspira intermedia PWS/A] MFTKRKEKIHFIGIGGIGMSAIASVLNAIGFTITGSDLAKTAKTESLEAAGIKVYYGHKAQNIEDDVTAVVSSSAISPTNEEIIEAKAKKITVIPRGEMLAELMRLRYGIAISGSHGKTTTTSLISQIMMHAGLNPVCIIGGNHFNLKSNAACNDLSSEYMVCEADESDGSFLRLSPVINIVTNIDNDHLDYYGNVEALRVAFLEFINKVPFYGCSFLCFEDSVVKDLSKSANKKFYSYGFSKDYDFYVDKDSIRVEAPITYFTAYHNNECLGEFSVPLIGIHNVLNSLASIGVGIHLGIDIADIKEGLKTFEGVGRRLNKLYDKEITLFDDYAHHPTEIKATLASVKNAYKNRRIIAVFQPHRYSRTELLLNDFESAFNDADEVIISDIYAAGEAPIAGISGEIICDVVRKQNEHIRYVPNIEDVLPVLDDMKKDGDIILTLGAGNIVRISNEYARKLQNG >gi|343386435|ref|AEM21925.1| UDP-N-acetylenolpyruvoylglucosamine reductase, 1476268..1477170 [Brachyspira intermedia PWS/A] MVESFLKEKNIEYYINQAFSKFSRFNVGGNIDLYIVVKKISDFLELANFLYKNVIDYFVMGDTSKVIVSDNGYNGIIVSLEGEFESFEFLDDGVLKSNSSAILERLSHEARIRNLSGLEFVALVNTRIGAAIYDKLESFGISLLNLVKSVTLFNKQDCTVTELSKDEYLALTDKEKRFIIILSAVLVLEKDSPESIDNRIDWFRYIRGSVAPTDASIGPVFEDFYDVKAYEMVERVGGLDMQFGAMKWHKRFPNYIINESLYDAKTESTAEDVINLIEDTRKKIEQHYAFNPRINIVLLS >gi|343386436|ref|AEM21926.1| hypothetical protein, complement(1477228..1477728) [Brachyspira intermedia PWS/A] MRFLTILFIILFSISCSNNADKTQTTTSESVLDYVQVDSPNSFAPLGISITVAPPEHGQNGKYFIVNKNIAESTFDYMNNAYIYRASKDKEALLSLYGDYQNDINKNFTENEYKIDVEYNITSFNEKFTLWKVDDIYYTLSTKTEDDKDLTNLSVLYVNSIHWNKK >gi|343386437|ref|AEM21927.1| hypothetical protein, complement(1477764..1479182) [Brachyspira intermedia PWS/A] MEINLDNYVTIPLEKIKDYKEVILKDKIEIISKNENGVVNVIPYNKIDYLFNNNLKENPLFAGAQYYIYKSYLDMIEFFVSPNELNSKDYFYSIFTNCKDPIENTQKYQEAILENILSINEYKRVENIKNLIIELEIEENRDKFTCKAASLLGEILVRLGLMIRINVIGNISENNENYKNIYESTKYNTNYEELMKSISESTFVLLNKNYEKTDMFNDVIGFTGCNIIDHSNRLFINTIEFMIFYNKNISMGMLSKIRAKWKNDYMPYYIKVSKKNKFIKDISKLDNIFKLGIRQFDYSEIVNMSIAALLHDITLTEIINYLPTENININNELYAHAIKSYNYIKYSISNNQDINLAVGVHHEYYGYGHGLAMTICEAMKAKRPNFEYPYLISFDSKDIFNFTSFIFYPVKIIEILDLYDFLKYKHDICISEINTDSEIIDYMYDNFLKDEVKIDYIIFSIFKNYLSEMKNF >gi|343386438|ref|AEM21928.1| YheO domain protein, 1479260..1479988 [Brachyspira intermedia PWS/A] MENIKNYYIITVLIIKVGEAMYNYIYTQEDFSILNSYKNISISLGKYLGDNVEIVIYSFENEDCPIVFMVNEYMHNKSIGDAISDKDRSILNEILDKNNNKFFKNNFIETVTGECHKINYTVIENSNGIPIAMMVISWKFDISLVNTLKVFIPDNISSDVKESKNSKSEDIIIEALKKVIGTVDKDEVGPSVYNKTIIKKLYAQGIFEFKESVQLVANYLNISHHTVYLHLRSIKRSKKNNK >gi|343386439|ref|AEM21929.1| tyrosine recombinase XerD, complement(1480077..1481006) [Brachyspira intermedia PWS/A] MNMQNDYVFNDEKIYVLLEEFSDYLQTLNFAAHTINSYNKDLKEYFQFLHSKNIPLDEANHYTVRDYLTFLKEKSLTNSTMSRHLSSIKKFYKYLIRNGYSDKNRIVDMKSPKREEHIAKFLSIEDIDSILAIDDEGDFTLIRDKMMALFMYAIGLRVSELASLRLSMIKKGSETLRICGKGSKVRDIPILPIIYENWDIYMEKRRIIQKEYSENNDYLFINRFGKPISDRSIRTSMKRLIRNANISIDFSPHTLRHTFATHLLNNDAEIRGVQELLGHETIATTQRYTHVTNSRLFEVYNKFHPHSNN >gi|343386440|ref|AEM21930.1| NMT1/THI5 like domain protein, 1481565..1482587 [Brachyspira intermedia PWS/A] MYKKNILLLSFIIMILFVSCEEKTEKIEKTVNVFPARKYPIRVGYMPDFSGTSAVAIAKENGYFDEEHLDVTLIEFLDGPSEIEEMLLKNLEFAYIGHGAHSLAIEGKVNVLFPNGLSRSEQIIVRNAANIESVKDLRGKKVGTQLGTSSEILLYLALKSLGIKTNDVEIINMNGNTIVSSMMNDTIDAASVQAPYSFEILNSLGDKVKSIATTVDYSDVGSFPSSWVVTPSFQNNNSDIVNRFSRAILKAMDYRQLNMSEAVKMVADMNGKTVEEVDLERETGLWLSGDEVKKAYIDGDASKWYKTQQDIFIYTKTITNKVDINNYVQIKYMINNVFNE >gi|343386441|ref|AEM21931.1| Site-specific DNA-methyltransferase, 1483089..1484801 [Brachyspira intermedia PWS/A] MITNTEANIRDKYLKENLIAYIGNKRRLLSFIENTISRILEEDGNVNTALDLFAGSGSVSRLLKTMDLEVYSNDWEYYSYILNYAHLCINEEDLSNMFIHTGGAENTINMINNIEYIDDDDRYISKYYAPSNDENPDLMNERLFYTHYNAKRIDIIRHNIEMLYKNNAINEKEYYYLIASIIYESATHTNTSGVFKAFHAGFGGRNKDALHRIMAPISLKPIPLYNGKQCHVSMLDANEFVVKNKNKHFDLVYLDPPYNQHQYGSNYHLLNTIALWDKPAINKNIYIDGKKTDKGGIRKDWIKTKSMYCYKKTAKDTLINLLDNIDSKHIVMSYSTDGIIEYDDLISILESRGKLDIVTSEYTKYRGAKRSIVNKTKNIEYLFVVDTSKTSCSSTNKKLRYIDNIRLKMDNPLDCSKDSIVFDYDKDDVIVLNLKYSVHIINKDEICDKLKDKSLEYIKMFSIFLDRYIKEDNINALKIYSYHINAAILANDIRLIKYFGEYILQIYSRLCSRKSNEYLIDITNSILDILSYYNDEISIISRIKQRIIYNIKHSNISEINKNNLLIRLEK >gi|343386442|ref|AEM21932.1| SCP-like extracellular protein, 1484901..1485347 [Brachyspira intermedia PWS/A] MIIIIVFSFSVLSAQNYNDDINSMLKIFNEIRENENLYSFEIDDKLNNIADIRAKELAISFSHIRPNNTKYDELLYQNRIIAYSSDENIAYRFKNAETVASYWMNSSKYKVNILSDKFTHIGVAHYAINGEDFWVVIFAQLTKSFNYY >gi|343386443|ref|AEM21933.1| GTP-binding protein HflX, complement(1485444..1486451) [Brachyspira intermedia PWS/A] MNNDNLKKAYIIFVTDSRQYRNTKINIDNILNELAMLCDTAGYEVVNKYSFIQPKITAGTYIGTGKLESLKESAAIDNVEYFIFDNELSGSQVNAIEEGSNITALTRTEIILEIFALRAKTMTAKMQVELAFLEFEYPRLKGKRTNLSQIKGGIGLRGGAGEKQLEYDRRRARERIHKLKSQLSKVEKSASTGRKGRENTFRIAIVGYTNAGKSTLFNLLCKESVYVEDKLFATLDTHTRKLYLTDDTPVEVIISDTVGFIDRLPHTLVASFKSTLSEVVEADLLLHLSDASDENIEEKLLHVESIIKEIDASHIKRIVIFNKSDCIDEIQKIKY >gi|343386444|ref|AEM21934.1| HDIG domain protein, complement(1486470..1486874) [Brachyspira intermedia PWS/A] MGKRYKDDEMRKIILENDNKEYPNYITGALLHARVSSIITEKEFSITDKEILNAIESHTVGHRNMTMLEKIIYAADYLEPTRNIPAADKIREKIFTDFDNAFLEVVLESINFVLSKKQYLSDKTIELYNSLVIK >gi|343386445|ref|AEM21935.1| oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal, complement(1487108..1488103) [Brachyspira intermedia PWS/A] MENNIILKLENVKKYFYPSTNIIESLIKKSKEIKAVDDISIEVKRGEILAIIGESGSGKTTIGKLVMKLIEPTSGNIIFENENINNFTKEETAKYRRKVQMIFQDPYASMNPRFKIKDVLKEPLYIHNIEGDEKVYDEMVIKALKDVKINPPEEFMERYPHMLSGGQRQRIATARALILNPKLVVADEPVSMIDLSTRAEILYMMKELQIEKNLSYIYITHDLSTARYFADRIAVMYLGNIVEIGNADEIIDNPQHPYTKALIAAVPDASSGRVNIIKELPIKGEIPNASDIPSGCRFHTRCIYAKEECKNNIPNAKKISENHSVSCLFAD >gi|343386446|ref|AEM21936.1| hypothetical protein, 1488502..1490052 [Brachyspira intermedia PWS/A] MLLLHCMEQYMKNNSLIYILIIVLSISIGIFTRIQLYEKYNITSSDSLEHYYNMRKYYDNKVVPVMGVHLVSPNKLIGSEEVYDTKIPRVPGGLFYLQYTFLYFLSGENIETARLLNYILITISPLIFLIFIFKKFGLKITSIITSILFMNINFLNFQNEIYNPDTVFILSFLSITLILIYISSDNRWAYIASIFIFPILALESMCHIAVFFSMVPTFLIYLIIRRNKTKKYIIPLSISVFISFLLYVPYIAYEISNGFPNLMNVVNLKNSVKPIIQPPQIWSILFFPTNEPNYNYGNGIAIIFTRWFNGDIKLVFSFIFYLASVIMGAASFIILITDLFRKKINDDPIFKESAIIYFVYIVATIAIFMILNLGAGRPRYFYNIYPFTFIPIIYFIKKIEHKKLFNFVVIFAILNLFAVNFQAYNDYKDRKDIGWNFMLPHIKNIIEDSNTNSFNLYDSDQYSYVLMKIENPNFKLDTNSNIKYNIIKPGDTNFNNSMLIIYSNEQYITYKEEITN >gi|343386447|ref|AEM21937.1| oligopeptide/dipeptide ABC transporter, ATP-binding protein, complement(1490045..1491004) [Brachyspira intermedia PWS/A] MENILEVENLKMYYHTSKGLVKAINDISFKIKKGETLGIVGESGCGKTSLGTSLLRMPSIPGKYEGGRIILDNEDIIPLKEEYIRKNIRWAKISMVFQGAMNSLTPVYTIEKQMIETINRHIDMSKSDAIKLIEEYLGYVGLHADVAKRYPHELSGGMKQRVVIATALFLKPKLIILDEPTTALDVIVQAQIINLLKKLKKDFDLSFIFITHDLALEAEISDRVCVMYGGKILELANNEDIYTNAKHPYTKRLLAATPRLNKAVNKLEFIEGTPPDLLNPPTGCMFYDRCKERIDKCKNEEPILKDIGNSHLCACHLIN >gi|343386448|ref|AEM21938.1| acetyltransferase, GT family, complement(1491105..1491554) [Brachyspira intermedia PWS/A] MFKIEKAGIENIEDISILAKNIYLKYNSSLDTDEGINNVLTFISANNMRLRFFMQGSLMLIAKNENDIIVGMLEITDFDHISLFFVDDKYFKLGIASSLFEEAKNILNSDKYTVKSSHYACEFYKKLGFVELYNDIQEENGVHFHYMIY >gi|343386449|ref|AEM21939.1| hypothetical protein, complement(1491563..1491922) [Brachyspira intermedia PWS/A] MLTFKTIDDKEMQHIMDTKEVSDDIKKSSENVLAIFTQDWCGDWKGLQRELNANKDNADIDITIFICLYNESPLYEPFMNFKENVWNNDLIPYLRYYKNGSFVKDTNHLPFQRLIKAFQ >gi|343386450|ref|AEM21940.1| conserved hypothetical protein, 1492068..1492772 [Brachyspira intermedia PWS/A] MINSFLFAGDFLDDQKRYNRVRTAIKEKDNIVKNTLKNNNIELEELNILITVYKQEDILEIYAKNKSDSTYKKIASYNIAAKSGILGPKRMEGDLQVPEGFYYIDRFNPASSYYLSLGINYPNESDKKKSNASRLGGDIFIHGANVTIGCMPMTDDKIKEIYLYAVYAKDNGQDKIPVYIFPFQMTDSNFDYYKKYYDESLIDFWLNIKNGYDKFQTTKKELNIKVDSKGNYVF >gi|343386451|ref|AEM21941.1| hypothetical transmembrane protein, 1493221..1493817 [Brachyspira intermedia PWS/A] MELDRGVYVFMLLSLASSNINYILISANKIIDTDIFHYISTFISTYMSKLSSFSFLILMIAYILIFMKKVVMKNINKSFFFIIMMVILSIIAILVFGNSFFLIVISFFGALGIVMYLPFTVYLVVIIMFLMTLFTSFMSCLVSKYYCPKLIVFTLFMLAGLDMSNFGLRLISVFAIMEMLSICNDKKDYDEHLTNNTL >gi|343386452|ref|AEM21942.1| nucleotide-binding protein putative, 1493871..1494320 [Brachyspira intermedia PWS/A] MKKEIIKEEKNISLEGIEKVAEFFKDILKDGDVVIMEGNLGFGKTTFVRILSRLMESEDIVSSPSFTLINEYDIILNGEESILRHVDLYRLEKEEELDDIGFKDKIRENGITMIEWGNKFKDYFEAPYYLFEIEMHEENNRLYRISFIS >gi|343386453|ref|AEM21943.1| hypothetical protein, 1494343..1495347 [Brachyspira intermedia PWS/A] MIFALLISCSKQIDKNTIVNALTSISSVNVVIGNTIDYEVRILSKNNIDYNFEDLSFDDRDNKCRIISVENKTRNVGEYKERIIKYKLGFYDVGQFVVYPFKISYNYNNEYRELHGEDMTILVYPFSDGETLPPMKGTIGIPMPKYVWLFAVLIVFAIIGIIILIFAVVKYIERKFNEKINIKEDTEALNALKLIDCNTYYNENKYAEYYFELTFIFKRYLTKRFRFNIEDMTTSEINQLFKENVFNESEYIIKMFEESDYVKFARQIPELKIMQKDYDFCVDYIVKNGNLYTALKLEEKENKKIRKEEKKRLRKELKEQKKLQKKMEHLQENS >gi|343386454|ref|AEM21944.1| tRNA modification GTPase TrmE, 1495357..1496751 [Brachyspira intermedia PWS/A] MNEYDIKDTIAALSTPYSKSALAIIRMSGSKALEIASKICFYANNENKNINNFEHRKSYYALIKDENNIPVDEVIVLSSLSPNTFTSEDTIEFISHGSIVVIDALMNLLIRNGARAANRGEFTYRAYINGRIGISEAEAIHDLIDSNNKLMAEASIYKMRGRLTREIDKLRENIKNSLMLVYGELDFPEDETESFSYDKLIENFEIIKKDIENILSNSKRVENLINGIKVAILGRVNAGKSSIFNMILDRERAIVSNIAGTTRDFLSENIYIDNIPFYLMDTAGFHKKADNDIELEGIERAKKCACESDIILAVFDGSDIANEDDINLIEFLNTLDNKNIIYILNKSDEDKKFNKEIDNANIINISTKTKSGKGELISALKNYVSDSDMDIFNKETYVNNRERGYLESGLKQIDICIKKSLESYSLDEVAEEMNILNNILGNVSGKVDAEEVINEIFANFCIGK >gi|343386455|ref|AEM21945.1| hypothetical protein, 1496952..1497626 [Brachyspira intermedia PWS/A] MAASGFEGIINIPSGLSVGIPMGNSELEIGLGFDIGVTAQFGYVIDFKNNIGLSILAETGYSYDTYSSSISSDSTKSVVSTSAFHSFQIGILPKVNIYDFSIGIGGGLKIPVAGIEEEKTVTYGTNYTAAGSTVNMLDIVNKYDKMNVIPYIKLTLDYSVFNNYNVGANFGLYFDYEFGVRKKIDETKYVSTDAFGVGLQVGLRFSPFNSHQNDLDKKEQEKKE >gi|343386456|ref|AEM21946.1| hypothetical protein, complement(1497848..1499746) [Brachyspira intermedia PWS/A] MDTKIIDNIDSKVLRYKNIFAIPSIHSRVYFSLAVREAFEKFKPDIVAVEHPANFADSLREAVSRLPFVSLIIREIEDEAVYIPIDPCDSIIEAVRLAIDEEIPFFPIDKDITSINTNSHYLMPDDYVMKNIGLEKFYNEVKNNYIFHKDESDEEREIFMAKNLHELSKKYNKILLVIGMSHWENIVSILQKLDDEKLDNKAKEEIINKKFSEDDEEYIYSEPKIYNVHKESLNKMLGEFPFTTYMYELYRNGELETFDKIHIIETIFKEAKMRYKLPISLLQQKNMMKYLRNLCLLDNYIIPDYIDMLTAAKCMINNDYALEVMEGMEYYPHYTEEDENYPTIKLNRDPSTNGMEGMLKDKKIKLHKYDNVWKTSFKKVNVTTRPSEKYEGEWEDVWNKRTNLLSHVPEDILMEKHMNILRDKIRNMLTEDKARIEPFTVSIKDGIDMRETIRNYYKNEIYVREIPKIKGNIGHMVVIFDDEHDEDYDWNIVWYSEAHDDSDLILYSTEPGNTLVGPGISKCYFGGYASLMPPQAPHDVWRMYKHLKKEGIVRNYADLLLYTAIIYSVDKYLGYVAPNPPSNILKEFAKKNSVEIVYVPLTTFSSETLRKLRHFHVLGNKRLRKIADDYII >gi|343386457|ref|AEM21947.1| membrane carboxypeptidase, complement(1499757..1502036) [Brachyspira intermedia PWS/A] MVADIVLQPDVQAVELYKPTIPTKIYDIKGEVISEFFTEQRALVEYKDLPPQLIEAIISMEDNNFMSHFGIDIIGIFRGTIGNILTGRRARGASTLTQQVARNIVLKSTERTITRKLKEIWVTFQIEKRLTKEEIVTLYFNQIYFGHSVYGVQAASRFYFNKDVQNLDLAECAMLATLPPAPNAYSPINNPNISIARHKVVLNRMADLNFITRDEAKQAHKEFWESYTGKIGRRGSTAYSASIDRAPYVTEYVRRQLVNRYGEKALKEDGLKIYTTIDIEKQEAAQKLLTEALTEYNNKYEGGSMDIVNLYNRETIDKMKMLSILFNLPENTAYNKFNIAVRDTLNKYTTLPLALMSDIFGMEEVNDITMEVMKADEAELSRQIEGALVSIDPRNGYIVSMVGGSGFTARNQFNRATQARRQAGSAFKPFVYAASMDVTNYSPSTIVSDAPIGFVPEEGEDGEVWIPKNYSGNFKGDVSLRYALSASLNIATVNVLNYVGITNTIRYVEPIFKAEPDSDKSKRMFNHDLTLSLGTGLFTPLELTTGFAEFANEGKEVNPILIRYVTDRYGIVMDNFEDDLKKKITLRGGPKQVISKEVAYMISDILMGVLRGGTATSAMYEAKFTRRGAGKTGTSNDWKDAWFVGYTPELATGIWIGFDSFKYSLGNNQVGGRVAAPIWGKYMVEALKEVKPTWYKKPENVVSMQVCAISGKLPGPSCYSFQTDLFVQDKVPTDTCNVCSHYLEDSNELDNIIDSFLNY >gi|343386458|ref|AEM21948.1| hypothetical protein, complement(1502375..1503754) [Brachyspira intermedia PWS/A] MKKTLLLLSSLILLLSSCSQKNNENTNIFEALNGSEFYLTSNPKITIGFENSNVYGNASINRYFTSFSISNDQIILGTNIGATLMAGNEEDMKAEQEFLTDLGKANSVSLENDKLIIKTSENKELSFTKRSLNYNDLYGREFILENKYPEIGITIGFDTNKVYGFSGVNRYFAGYTLTNNNVISIGALGSTMMAGPEENMKAEQDFTTLLSEASNITLSMTNLEITTKSGEKLIFKDDSISSNKLLGRTFLLKNFYKYPNVEITMSFYGKENQVNGFSGVNTYKTSYTNINGNEVKFNGLAMTKMAGPEENMNAESDFSKYMENAKYMYLKGKELIIIANDATILRFVEDYFDVNEHSGKEFKLSNMLEGTEITLSITNNSFVGKSGVNNYNIPFEIKDGKITMSKTGISTLMAGPEADMQAEDEYLKLLNKANYISYNNNTLCIKTSDDDILLFNMVN >gi|343386459|ref|AEM21949.1| acetyltransferase, GT family, 1504163..1504663 [Brachyspira intermedia PWS/A] MCNIREAHIEDAENVVNYIVKVSDETNFMMSDSNERELDVKKEEEFLQSIQKSITTKMFLCEIDGEIIGICNLKGIDRKRVKHRVNLGISVLKKYWGNGIAKRLINYAVAYAKENSIKKIELTVRTDNERALKLYKSLGFFIEGEIKSFFCIDDIYYNCYIMGLFI >gi|343386460|ref|AEM21950.1| flagellar biosynthesis protein FliP, 1504884..1505657 [Brachyspira intermedia PWS/A] MVFLVLCLLVPVVAYAQENTQIPIPTIGLNVTQAQTPQQVSLGLQILFLLTILSLSPSIIIMTTSFIRVSIVLSFVQRALSLQETPPRALIMGLSLFLTFFIMMPTLTQVNNEALQPYLNGTIGVNELYSRGIQPIRMFMFNSLRGENGMKSLDLFLSISNTDIRLREIQTVEDLNRIPTIVVVPAFIINELTIAFKMGIYLFIPFIVIDLVVASILMAMGMIMLPPIMISLPLKIILFVAVDGWKLLILQIVQSFQ >gi|343386461|ref|AEM21951.1| flagellar biosynthetic protein (fliQ), 1505765..1505983 [Brachyspira intermedia PWS/A] MLLSAPVLGVSIIVGLIISILQATTSIQEQTLTFVPKMIAMLAVIYMLASWMLNYTSAFTVRLFSILPSIAR >gi|343386462|ref|AEM21952.1| flagellar biosynthetic protein fliR, 1506074..1506835 [Brachyspira intermedia PWS/A] MVRFVAILMVAPLFSSNVIPNTIKMALAFIATAAIFPLVANINVQAAPTFVEYFLTLVNEALIGILIGFLMSIIFTAYQVMANFFEIQMGFGISETVDPISQVTVPVLGQLQSLVVILLFIAIDGPSWVIRTLFYSFKAMPVLSDASKAVFTSSFNGVIDRMIYYMSSLFSVALSLALPIMLTLFLLSLSLGLLAKAAPQMNILMLGFPMQIAVGVAAYYILIPVLVSNFMKVLETTIADVNNIITFLSGGTV >gi|343386463|ref|AEM21953.1| flagellar biosynthesis protein FlhB, 1506832..1508034 [Brachyspira intermedia PWS/A] MIKKILSSIFELFIIFKAKLYRKYLRLTGKGYVLTLFAAPEDEGRTELPTERKKRKAREEEGRVVNSAEINQTLVLAVSIAVIALLTTYFTHTVAQFFISVMNKISNADASINNAAYTDMLLEIFVLLAKTAGIIMAVALVVGVGVNLAQTQFLFTTKKLKPNFKRIAPTWSNFKERVFISSQNLMNLAKILFKMVMISILTFTTIYGKHTELFNMVNMGLSQAMNLFFFIVLEMLAKVIIFMIIVSAFDYFFQKRQYINSLKMTKHEMKEEFKEMEGDPLVKSQLQEMARKIVSRTMLKSVPEADVVITNPTHFAVALKYENGDYAPVVTAKGADHIALKIKEIAKENDVQIVENKPLARELYYNVELGQYIPEKLFHVVSRILGEVYRLRNEKMARAI >gi|343386464|ref|AEM21954.1| flagellar biosynthesis protein A, 1508056..1510167 [Brachyspira intermedia PWS/A] MNGAKSILDNIKLPSNLSRHSDIMFAIGAVMVIMMLIIPLPSIILDFLLIINIIVSLLILLMVLSIRSANDFSVFPSVLLVMTAFRLALNVSTTRAILTEGANFNGKVITSFADFVVGGNIVVGVVIFIILIIVQFVVITKGATRVSEVAARFALDSMPSKMMAVESELQAGAITDKEAEEKRKKIRGESDFYGTMDGASKFVQGDVIAGIIITVINIVGGLIIGMTMRGEPFTQAVNAYTRFTVGDGLVSQIPSFFMSFATGLLVTRSSSEDNLSTQIAVQVFAKPKNLFIGAGFAFFLMLLPGFPKIALFVIALALFLAGYALKKEQQELGLNEDGTKTDAGEQVHQGPLDVTPFLKVEKIELSVGASLIPLALESEGGDLINRISQIRRELALEVGLVVPPVRIVDNSVIEPDEYTVSINGTEMAKGFVRPNMLLALNANSPDGPSPDCEKVREPAFGLPAYWIKVDEKDMAEKKGFMLFQPTSVIATHFSETIKRNANLLIGREEVQNMLDLIKDDHKALVSEVLAAKPHNESPLGYIQKVLQNLLQEEVPIRNSVAILEGVADAISIMGSEQATELVRSRLASQISQMVADQDRNIRVITLSQQLQNNIAQNLANTGNLQGSQMIAMSFESMQNLIKNIKDAVKLVSDSGVDDIVFLTSPIIRRPLYQFIAKNVGKYKVIATTEIAQGYNVQGIASIK >gi|343386465|ref|AEM21955.1| hypothetical protein, 1510231..1510404 [Brachyspira intermedia PWS/A] MKTIKIFGKNREEIEKQARDKYGESYFIISVRESKRKNIFGMIKKEFEVSIGILEQY >gi|343386466|ref|AEM21956.1| GTP-binding signal recognition particle SRP54 G- domain protein, 1510440..1512437 [Brachyspira intermedia PWS/A] MVDIRTIRGKDKKDALVKARVEFGVNFVILTSKDIKVGGFLGLGTKTEHELRIMLNNSIYDRKNNSMNEDKSYSDDEDEMYRSKLLSDRIEMKKHSSETIDASEMADRIVSITKALKEKSASRNNSFSNNNASRSNFHENSYSTENEDIPEELLNDTTTNNNSTKANIIEEKIEDNNTREKSVDNFIPLPNFSNNQYSNFQGSTFANMRNPMLSDYSSNNAFSPISNYSNFATNNISNNNIPNNSFMNNLNNNVMYNHTNSSNNNQNNINQNNSSNSVDDNVKKIVQEQIRDIIKEYLENNIPNINLNKNNSNNSNINEDSKHQNKISHSDTSSDEDEIKNAIEEIKESRREQRIIREQRESKEENNVRESKNNIRDYFNDDTKEEDYDNEENDIEDNAEANIADGMEESFSYLRDREFPEEILLELREYLLTSSNARFFQSKDVIREEVEKYFAERLILSNGIEIGAKKKIIVFVGPTGVGKTTTIPKIAAQYMKSGKKVSFVTIDNYRIAAVDQLQRYASIMKVPFTSASTPEALRAEIRKMDNSSLLFIDTMGRSPKGAEDIVAMSKYFTTVGRFDMDIQLVMSATAKYKDALKILNGFKPTNYKGVILTKVDETDYLASSICAITKKKLPITYITHGQGVPKDISTAKKYGYKIMEGLFGH >gi|343386467|ref|AEM21957.1| flagellar synthesis regulator FleN, 1512490..1513353 [Brachyspira intermedia PWS/A] MKDQADELRKMMSMKDKRPQRIISIASGKGGVGKTNIAINLSIALQQLGQNVILVDADLGLGNVNVILGNMPEYNLYHVIKGVKKIHEIILETDYGIRYIAGASGFSSLANLSGRALTKLVNSMDSLNDADIIIVDTGAGISDNVLYFLLSSDESIVVTTPELTAILDAYGVIKSIAPENANADIKILVNRVIKASEGKEVSDKIIMTSKKYLDMDVKYLGHVMEDKTIPYAVSQQLPFYQYDNKCQASMSIHNIAKRIIDMEYDDGREVKGFGGFMESLLSFVSKK >gi|343386468|ref|AEM21958.1| hypothetical protein, 1513376..1514008 [Brachyspira intermedia PWS/A] MNNIVEKVKQYFSSNFGKLDGIISILSFVVTLVMSVLYKNRIDISLFKALLSGIITFAILFLIGLLLKRYLGDIIESSNVSTNMDMDYNSLDDHSIANNISDDSVNNIDNTNNTTNDFNPDNITISPDSINLDRKPNSKPSPASSGGDIGDIVFGKSPSSNNTSYSTSSSSMFPDKKVSDNEMIKEVQEDPEKVAKAVRTMMAKDEKDDK >gi|343386469|ref|AEM21959.1| RNA polymerase sigma factor WhiG, 1514045..1514368 [Brachyspira intermedia PWS/A] MKDKDKIPNITNENEQEYWLEFKKTLSTNIKTAFIIKYSPLVKYVASKIYVNMEFHKRIEFQDLIGFASFALTDAIDKYNPNRDIKFKTYAIARIKDVIREELRRLD >gi|343386470|ref|AEM21960.1| RNA polymerase sigma factor WhiG, 1514416..1515243 [Brachyspira intermedia PWS/A] MNIMKMNKKDKDKIPNITNENEQEYWLEFKKTLSPYIREALIIKYSPLVKYVASKISVNMGSHKHIEFQDLVGFGSFGLMDAIDKYNPNRDIKFKTYAVTRIRGAIYDELRKLDYLPRSIRKDVKEIEKAREILEARLSRNIKPQEIADMLGIPISKYNETMKRYIEASPTSLSDVWYVGDDSDEISVIDTLKSNDKTNPEYLAEREDVKNKIIAALKKLPEKEQQVLILYYYDDLTLKEIGKVLDVSESRISQLHTKAIQQLRYSLSEIKKQLL >gi|343386471|ref|AEM21961.1| RNA polymerase sigma factor WhiG, 1515259..1515444 [Brachyspira intermedia PWS/A] MNELKKKILETKKMSEKEKQVLILYYCDDLTLKEIANVLDVSESRISQLHTKAIQQLRYIL >gi|343386472|ref|AEM21962.1| Polymerase, 1515492..1517477 [Brachyspira intermedia PWS/A] MNELKKKILQSDFYKKIYNNKNTRSVELSVASLERGMQEAAAIFQCPIYELSYKVLEEGNKGFFNIGAKPFLVRYTHITYDKSNMGVAAANTYEDIYSEGSVQQKIVFNKDTEVIVRVKRDGVFLKVKPPVGDGKRIEDITVLEEKLIDAGIKEYDSHLAKKMLHEQTGQYVKIAEWDIGKSANNAKISYTITEDKMRAYVTVTKPNKGGREMDLQDVKELLENSGVTFGFQEENVTKCLEEGTFNIPILAAEGRQPVNGENAKIEYLVNVNKKVIPKFIGEDQSIDYKDLTIVENVEKGQKLARKTPATDGEVGRTVLGVKIETKSGKDIEIKEIVGDNVEMSDDGEYIIASISGQVVLKGKLLSVEPIFEVSGDVGPETGNINFIGSVVVKGSVNDNYSIKAEGNIDVHGTVGKCDLEAKGDIMVKLGIQGNENSHVKAGGDVIAKFIQFSNIEAGNNVVVTEAILNSNIDADNRIILIGKRASASGGRLRALREVNGKVLGSQAGAKTFIETGISPAKRRAIDDLDREKEELDISIEETERNIKSLEQAGKLKKLDDEKKEQLQSYKEQLEQANTRREEIVLNREALIQEMEIEKVESTVSAGKEMLPGVELTIGSAEFSIRQSYKAITFFEQDGMIQTEKYRGEPKNEKKLITMINE >gi|343386473|ref|AEM21963.1| hypothetical protein, 1517486..1518451 [Brachyspira intermedia PWS/A] MALKINDFYRTAIDCAMDADPRGRKTVEKELNSIKKSYDKLDDKKKEYFDKDTLFNPYSDTRILNIAEDKDIKKILCGIDMQTSELLLADRLNEKNYNIDLVITHHPNGYGFVNFYDVISMQADKNALHDVAINVSEALTNKRLNEVSRSVYSSNHYRDVDTAKLLKLNYMCMHTVADNFVESFLTENIKKENPYTLSDIIDFLYTIDEYKISAKRLNPPKIFNGSNKSKVGKFIVDMTGGASFDVGMIEALSKAGVNTIVMMNISDRLLDECKKYYMNIVCAGHISSDSLGINLLFKAIKEKTKEDFEIIPASGYIFVEK >gi|343386474|ref|AEM21964.1| phosphatase, HAD family, 1518486..1519151 [Brachyspira intermedia PWS/A] MPKYINVLFDLDGTITDSAPGIINGALYGIKKINDVYNLNISIPDNDTLRKFIGPPLDTSFRKYCLDDEKLSLDFIKFYREDYNGNDGLFNCTIYDGIYDLIKTLSENNYKVFLATAKPKESALRIIEHFYMTKFFTNFYAPILGGKIKSKLDVLKEALEKENFDKEKTIMIGDRIDDIDAAKNIGIDSIAVKYGFGNEEEFKNATYIVNNTKEIFDILSK >gi|343386475|ref|AEM21965.1| putative D repair protein recO, complement(1519140..1519778) [Brachyspira intermedia PWS/A] MESISKLNINIYEKKENQLSILKESSIVKNYKILEKSIYSSLAVFYIREVLLYCAKDFDNRYFILMEKTLDALESLEGNNNNNKIKKMYINILMRAFEMKTLHIAGISPHLDKCTICEKNNDLLYYSILEGGLICQKCRNLVKDSINITEYDIAFMRIIKHTSLIEIIKNENLKQIYNESLDNVKYIMNKSIFNHINKTIKSQKVLEEILLT >gi|343386476|ref|AEM21966.1| hypothetical protein, 1519747..1519941 [Brachyspira intermedia PWS/A] MFIFSFDILSKSEPNAFELFFALWHIACIIELLVRKDAMIDEVLYALYDSINASVFFINIIPYI >gi|343386477|ref|AEM21967.1| hypothetical protein, complement(1520000..1520167) [Brachyspira intermedia PWS/A] MPRVINNDCVACGSCVPECAFDAISEGNIYVIDPNKCTDCAACEAVCPSNAINPA >gi|343386478|ref|AEM21968.1| homoserine dehydrogenase, 1520472..1521725 [Brachyspira intermedia PWS/A] MVKKKEFKVAVAGYGHVGKDTVKTIIENNAIMEKRTGIKLTIKTIFSRNIDKVKDDKFLDKVEIKTKDLNDILNDDDLDIVIEVLGGMDTAKELLMKVKKPVVTANKALLANCFGELIKDRKTDIAFEASVAGAIPIIKAMKESLVSDRMENVYGILNGTCNYILTNMTKNNLDFKDVLKDAQDKGYAEADPTFDIDGIDTAHKLCILSSIAFCNVISFDKIFIRGIRNIILDDIVFASEMGLTIKLIAEAALDENNNAYIYVIPTLLNDDNMLSKVDYAFNAITVVGDRSGDTVFYGSGAGGRPTSSAIVSDAVTLARNSLITDELRIPILGFVEENKDLQVKDFKEKHETFYVRFKSNKNNLLAFNEAFYDISIEKSVERNGNFMFVLKDVNINSIIEAINKVEKIDDIFIAKIK >gi|343386479|ref|AEM21969.1| selenocysteine synthase, 1522359..1523705 [Brachyspira intermedia PWS/A] MNNKFNLIQTNAVLEDESIKPYHKIISRPIAADIIRETLEKLRTQLKNNPELQYDKKDIIKLCEIEIKKKANLPIKKVINATGTIMHTNLGRSPIDAEVWDSVRELNINSNNLEYNINNEARGIRGEFVYSLLSKLTGAEDALVVNNNAAAVFLILKTLASNKEVIVSRGEQVQIGGGFRIPDILKEASAKLIEVGTTNILDIKDYEESITENTAMILKVHTSNFKIRGFVKSPSLKKLRETIPDNIALVYDEGAGIFDESMSEEEHIKSALKSGADLVCFSGDKMFSSVQAGIIVGKKKYIEKIYKHPLMRAFRCGKTVLSILEKSIIKRLNTEGNFKGYCETLLSIDKEIIKQKALKIIENIEGFEVIEEDIETGGGAMPDTFYPSYAISFKPKNIKSIIKFMHNLDVPIIPKVKKDSVLIYVITINDDDINYIKEVLIKIKDSDF >gi|343386480|ref|AEM21970.1| selenocysteine-specific translation elongation factor, 1523744..1525546 [Brachyspira intermedia PWS/A] MNRIIGTAGHVDHGKSELIKALTGISMMRLPEEQKREMTIDLGFGFFKPNDDITIGVIDVPGHERFIRNMVAGMWSLDLVMLVVCGNEGWMNMTEEHAKVALSLGIRNVVCVINKIDLVDDDKLKESEEDIKKNLYRIFNKDIEIVKVSALNGTNIDFLKDRITDILLNEKYEDDIKTHIYVDRVFSIKGAGLTITGSLRGGIIKKDDTLIHYPSRKEISIRNIQSYHEDKEIVYSASRIAINIKNIKKEEIRRGHLLCCKEEKVFSTDEIILELINTNDAEYLKKIKNAEFAAGTECLIAQILPIYKNKTYSDKDNKNNKEIDNRFIRLKFDEPISVFWKERGILISHGGSSIIAAGNVFWGEKTNPFIRKRIIDNANEFLGEVKREKYNDLFMSVNGYTEASGEIPDYAIKVANFFVKKDYLNTLLERLKNLIENKKEGISFEDIRNYLNINNAFTKVFIDYSVENQILMPFNNIYKKYNEEITLNNSQKILLEKLKKEDLNGLDEKTIKTFTNGMKDIKVLSASKKAVYLDEGIYYHIDVYNRIKKLILQNTKTNDIITIAFVRDKTGLSRKYVLPILNAFEREKLVRREGSERIVL >gi|343386481|ref|AEM21971.1| tRNA bind CsaA, tR-binding-domain-containing CsaA-like protein, 1525646..1526002 [Brachyspira intermedia PWS/A] MDIKEEIKSESSFDNFLALDIRTGTIIEAEDFPKAKRPAYKLKIDFGKLGIKVSSAQITKLYKKEDLIGRRIIAVVNFPKKQIANFFSECLVLGAVKDNGEVVLLTTKEECENGTVIG >gi|343386482|ref|AEM21972.1| TPR domain-containing protein, 1526037..1527641 [Brachyspira intermedia PWS/A] MGLLNREDIETLQSFNIDGGGYFYKMLNYLQEFIENGIKENKFTLEEAREDLDIALWYSYACNNIGDYEHYYMSKEFMKYSEKNAKGCGTWYYRHAVALIYCGKLEEALKYSEQGVIEEPDYPWGWLELAKLRLHFGNKEGAVEANNKGLELVPGDYEFLRQAEEIENYYSIEALEYHYINEESDKNLLRGLDYGEDKLNAIAYILCDEEKLQAIKDIINPIDWEADHPYCTFKFYVADDLVDGVFLMNEAAISKLDKELIKESIEELKDVKNKINNEENSKLTFVKFNIDYTIEAGFKNEETDKSFSIRKMFNKDSEYKKVADEIFDSYGMPLEPYLEELPNIVTLYKKEYGFLYYAECWINEDNIVKHTGIVGSSGDVKEYECSNPREYKNFLDDFYKEYNDYKVIDNEDLSYLILQFEIEPFENELPEKYADVLNKIGNVLNSVLSWNGLGSLDSWNAGETENIKGKYVINFFSVVVDVDIAFRLILNEVVEEIKDDINCDHIKMAYVPYIDNGENFTLIYSSDESTDFSI >gi|343386483|ref|AEM21973.1| excinuclease ABC, B subunit, complement(1527813..1529861) [Brachyspira intermedia PWS/A] MNFKLESNFKPSGDQVTAIDSLVKGLENKNKYQTLLGVTASGKTFTIANVIEKANRPTLVMSHNKTLAAQLYRELKDFFPNNAVEYFVSYYDYYQPEAYVPAKDLYIDKDASVNDEIDRLRLKATTSLLERRDVIIVASVSCIYGLGSPEDYRKLYIAIEKDGEYDRDEIIEKLVSIQYERVKDVLERARFKVIGDTIEIMSAYSDEVIRVEFFGDTVERIIKINPITRQKLAEQDRVVIYPAKHFVTGGDKLATGIKLIEEELEEQYNKFKSEGKLVEAERIYGRTKYDLEMLREVGYCAGIENYSRPLSGRKEGDRPACLIDYFPDDFLTIIDESHVSVPQIRGMFFGDRSRKETLVKYGFRLPSALDNRPLYFEEFEKLTHDTIYISATPAEYELKKSSQVVEQIIRPTGLLDPIIEVYPIDGQIDRILEEIKKTVSNNERIFITTLTKKMAEDLTKYLNENGVRTRYLHSDIQTVERVEIIRDLRLGAFDVLVGINLLREGLDVPEVSLILILDADKTGFLRNTTTLIQTIGRAARNANGRVIMFADSISDAMKVAIDETERRRKIQMEYNKEHNITPKTIIKKIQDIIEREEKVETSYELHFDFRRFNERVKIDPEQKSDDYIKELEKEMKKASDSLEFEKAIEIREKINQLKQLKPQKKNVHKNVTSKNPNGKTNK >gi|343386484|ref|AEM21974.1| peptidase, complement(1529864..1530718) [Brachyspira intermedia PWS/A] MKKYILLLFVISSFLFARVPIDPNRIRVTSTFGEFRTDHFHNGVDFGGHKMEIYPVKDGEIVYYVDEDEDPTRPLYGVGNVLMIEHPDNLRSYYYHIEPGTIEKSYAKVTEKDVVALTGNSGRSGGAHLHLTIENMKEGLVVDPLEYLSIDKGSTQAPLIHGIYLRTENRLIQIKDKMPMSYNGEIKLFVKAYDLLGGIPMGLKRVKIFMNDDLVRDYDFTYFIKRDNVYYISPNYTFEEVYGVDSHFYRGGVFVPKRGKYTFKAEVTDFDNKSVVLTRTVNFY >gi|343386485|ref|AEM21975.1| hypothetical protein, complement(1530715..1531890) [Brachyspira intermedia PWS/A] MRIKEKSIIESENIHKIEPLLIRYLTIITALVLIVLFIFFFGTNRLNEEYNTVNVWSKKTDSLDPPSHDENFYINGIFKHNFFTKPEGIIHYFDFNGDTIYSTNLSRGELATLNNQNFIIYKRYGNYIDAYNNMGGIIWRTNTSIYPEIAPYAERIVYHSSDNSKIQMFDFNNNPLSKHVQYGEIITDGAFALYTGDYIAGFSSGDIAYINRNGELSFAISTILSEINIVKSVAISEYGSFALAVSGIRPEYITLYDANGNTMWYSDTGLNRRRHVSSYISEKSMTAFMLADRDIILYSLNKGNEIKRINLEKYNMQNAINMKLNGETNTTIMSVSKDAQSVVLIYDNHTREIIFEKYLDGWVYNLDISNLENEYMIVTDKMIYTYKRVKL >gi|343386486|ref|AEM21976.1| peptidase, complement(1531927..1533108) [Brachyspira intermedia PWS/A] MKYIISIIFLISLSLYSQNNIQYLGNTSLNRGGKNIDIKTSNEILANDIIETEKNAFAEIKIGNKYYYLAPNTKIKVSNNNAVLITGAMYTRNKAFNSLEDFKKYDNDIKIYADPFPFYAGKVSTIFIASKDEVKIENSKLMGSARPIVKFFEVKNADRNMKVYKSVFGIYVGAQDKKYQFISDIKLKDNTLLNVAIDIKLDFTPPPPKPKQIPGVTATMKNIISNPQKSKEEKELLNGKVYISYTPTNYADKVYIMPSQGRYSSGFGAFRGYTKDYARYHQGFDIANTNGTPIIAANNGVVRVSRELFVRGNCVVIDHGEGVYSSYFHMSKLIAKEGQYVKKGEVIGLIGSTGMSTGPHCHWEMRAGNMTFDPLSILEKPVSFNTKMLTQIK >gi|343386487|ref|AEM21977.1| TPR domain-containing protein, complement(1533157..1533846) [Brachyspira intermedia PWS/A] MSIGSSRSKLEDGIKFFRNENYKEAIDSLEKIFSEKNDVESGYHLALAYAQIQDYDNTLQVFDKIMRRLDNPLRLMQAHIIVGYIYAVKEMYDLAEFELLDALSSGVENTQIHAALGYVYYKKGNIRKAIEHLRKAVNLDPKSANARNSLGFILADTETNIEEGIEEIRKALSIDPNNPAYLDSLGWAFLKKNDFERAKEFLTKAFELAPTNRDIKEHLLKLDKSSYKK >gi|343386488|ref|AEM21978.1| hypothetical protein, complement(1533969..1534469) [Brachyspira intermedia PWS/A] MYIDKLWGEYFGDCDDSLVLLEYFDENDNTQYSVKKIFTDFNVYNEYSTIKVDSFRKSKDIKYVCNGIEHNIDIVIDLILDLSVLILECLHNKKIYLKDLYSNSEKDKYISINADKEDIELFINILNDFSVNGSKYDLADMCDDETINNIAEKTKYIANEMSKFIY >gi|343386489|ref|AEM21979.1| Patatin-like phospholipase family protein, complement(1534789..1535685) [Brachyspira intermedia PWS/A] MKKLGLVLGGGGGLGSYQIGVWKALREYEVDKMIKAISGTSVGVLNACLIAQNNYDIAEYIWTNEIEDKILSKKKMDKNNNYISSNGIFSRKGLIEIIEKYLNIDIIINYEYPIYATAVNLKNIDAEYFKLNNKSAKEIKEIMMATSAIPVIFGRQTIEGVDYIDGGVEILKGNNLPLKPLYEENCDEIIAINLYKESTREKFNNCKVYEIVPSNDIGNFFNGAMDFSLEGAKMRIKEGYNDAKNMLKEIFKMGKTQLENLENNNMLYMYENDNAAERKKLKNKLNKAIDSLKIDDNK >gi|343386490|ref|AEM21980.1| hypothetical protein, complement(1535707..1537200) [Brachyspira intermedia PWS/A] MDFTIPYENEIDEKDKTIIQEYILNNIKDYENNSTKLTELIIEAVSSLSAGKSRTEYLAKQGFLENIINSITGQNRKIRGEIDYNYAVVKNASLKMIEYLANQNKITYEGLIYLNNKLNNIERNIEEELITICNNVRESFNVILNKINKESNRIDSLEKKVQLLEFKAASNILEFDNIKYIDMDNIEKIICLSNDLFTKISSVNNSDNNIPKENIYMIKSILFDFNVDMNQKIKVNDIYCKLIEKPNFINKLFLNTQNNINTYEYIIPILSGIKKIEKLDKEESYIINSIMKINPNINIKDIKIDLVNEYGINISNFDYNTEITNYDIIILIINELKMISKNFNPPIKYSDSKKSIELAREYFENKKYKKAMAECDSILFQDKDNKEARHIKIESLYKLLIKEVRNFESPLCYKEIAKIYLIKKDYENTLKYLNKYFDSYSSNKEIFKYKEKLQFQYKKIMEYEEKTNKKLEKTTDQNKRDYLEFINDFWGVYLNKI >gi|343386491|ref|AEM21981.1| putative esterase, 1537364..1538314 [Brachyspira intermedia PWS/A] MKNIFIMLCFLILFVSCSNTNIANTNNTNVIISTNEDGSIVFEQKDVVYNIDYKPNVVYANKDNTDLTLQIMIPRTLNVDTNAKYPLVVYIQGSAWRKQNVYRNLVALGDFARRGYVVAIVEYRPSDTAVFPAQIEDTRDAIKFMLYNSDKYNADTNNLFVWGDSSGGHTSLFTAIPLNDNDNTIPNINAIISYYPPTDLLEMRNDPLGSTTGDANSPEGIFIGRKNVYDYPEEAKKISPYYEISKAKNLPPIFLAHGTSDGLVPFNQSKILADKLKEENRVYEFYAIKDADHGDWQFWTKDMFDLVENFINKYKK >gi|343386492|ref|AEM21982.1| hydrolase, complement(1538368..1538982) [Brachyspira intermedia PWS/A] MLNNNIKLLIFDMDGTIIDSAYLNYYSYYNALKEFNIELDKDYYYNKCFGLHYKVFTKNVLELNNKITSDENKNNELIESVHNLKEKIYLENLNLIQIHPFILETLIDNYNKKENKKYTALATTASPKGVYGILKEFQLEKLFDLVITGNDVEKKKPHPEIFLKCFNHFNVEEKESIIFEDSEVGLEAANQTNAWVIKIEKWAK >gi|343386493|ref|AEM21983.1| Pyrrolo-quinoline quinone, 1539121..1540707 [Brachyspira intermedia PWS/A] MRNTKSRIEKIIKLLSEGLYEREEIVSLTLLSAIAGKPIFLYGPPGTAKSFIAKRVSSAFKDSKYFGYLMQRFSTPEDIFGPISLEELKNDKYIRKIDGYLPDADFAFLDEIWKSTPAILNTLLTIINERVFKNGSEEVKVPLKALISASNETPPEGQGLEALYDRFIVRLIVNNIKNRDNFEKILENTQLDSYINIDDELRISTDEWVNIRKEANNIKLSKSVIDIIHNIKLSIEKFNEDNRDIAIYVSDRRWQHISYLLKTAAYLNDKNEVDIYETILIYNCLWSIEEHIDVVKKIVENAISLCYDLNNQNISEWRESFKSVQKNIDDEFYNLEKTYDTENIDDKPHIAKTLSINIDEYGNKGETIIYIPIKQLGKKGYFYPLDIGRNQTRKFRCNFNGTEKCTVEINSATLANGFVSGMLSKNYEFLCEVEPDFYMKKVSPKKLEKEKKDAYLKLIKSLISSIENIIANFKNDFNKNKYTNKSIFISDENFNFFTEMFNSYIENLESEKLDAERLKSEIEEHETI >gi|343386494|ref|AEM21984.1| von Willebrand factor type A (vWA) domain containing protein, 1540694..1542091 [Brachyspira intermedia PWS/A] MKQFNNDSYKDEIKKTEAMAKGVFNSAFNNLYNDERLTQELEIKITKWKKDLNIFLNDNNPYQDNKTELDIALKKLKNTSKEDIFNDLNSLNALSVDTKFWREKLSNSDDLNILKKNIISVWEKTYNKKNNDWLVSTVKERRDKFISDIESWINLLKKLKYMSNILRIKTGVLWDFRVGELEEEDISLLKRWVDFINEYKDIEIICDSIGRRIDIEKSLKNVEFKNTYSNTNKKISSKEEIVGIYFAKDLENVIPEELSLLCNEESEKLFKLKYIENRLMCFDKSAYVFNDDMEHLVRAGYKEGRGDMIICIDTSGSMKGINEYIAKATMFKMVIRALAENRNAYLINFSTEIYTCKFTKENGIEDLIKFLKLSYHGGSDIYKALYEANRMMNTSSFKNADVLVLSDFIMEDMPNNLVTMCSKQKNNGNKYFAVSIGRFPFGYSYRRVFNKHWIFDIDNGLKEIY >gi|343386495|ref|AEM21985.1| glutamate racemase, complement(1542093..1542920) [Brachyspira intermedia PWS/A] MNIHSFSSDMPIAVFDSGFGGLTVLKQLLKILPDENYIYLGDNANIPYGDKSKEKIIELTLKMADFLIKQKCKMIIIACNTISACTYHILKQKYEVPIIEVISNGAIDALNNTKNNNISIMGTEFTVHSNAYKEMINKYKKEIKVTQVACRDLCPMIENDWYSYDNRLEVLTNYLESIDKNSDTLILACTHYPHITNDIKNLLQNNIKNSIKNIIDPSYHTAISVKKYLEENNLLNNINDKYIKIYTTEDIEKENKIIDIFMPKNSKYSLEEIKL >gi|343386496|ref|AEM21986.1| hypothetical protein, 1543124..1543336 [Brachyspira intermedia PWS/A] MLIGMGVVVLFLIILVFVMKFVAGIVAQVDKLMPPPKEEISAAPPVISSSNDKMVAIAIALAHVHSSKSK >gi|343386497|ref|AEM21987.1| biotin/lipoyl attachment domain-containing protein, 1543376..1545178 [Brachyspira intermedia PWS/A] MAKKEIKFMLTAFRDGFQSVYGARVLSKDFMPAVEAFVKAGVTYFESGGGATFQSAFFYNNENAFDVMDTFRKTVGPDVNLQTLARGVNVVGLESQPREMIKLHADLFKKHGITTIRNFDALNDVNNLIFSGKCIKEAGLKHQVCVSMMALPPGCEGAHDAAFYGKVLTQIKDKVDFDSVCFKDASGTTTPQVVYDTIKEARRILGKDVHIQMHSHETAGIGAVQYRAALDAGADCIDLSAAPVSGGTCQTDLIVMWHALRGTEYTLNVDIDKIREAEEVFKECMKDYFLPPESRTVEPMIPFAPMPGGALTANTQMMRDINVMNRFPEVIKAMTEVVKKGGFGTSVTPVSQFYFQQAFNNVMQGEWKKIADGYGKMVLGYFGKTPSTPDPEIVKIASEQLGLQPTTELAMDIDDKNPKKGRKAAEQALKDAGITDLSDENVFIAAACKEKGIQFLKGEAKLGIRKNAGGASEGVKATSNEVTVTVGGSSYGIKIENGKAIVDGVSYDYTIKDGIVAGAAQSAAPASSGAATPVTAGLPGTVLKIVAPVGTQVQDGTTILIVEAMKMEVEIKSSASGVVKEVKVKPGDAVVAGQELAIVG >gi|343386498|ref|AEM21988.1| Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit, 1545212..1546588 [Brachyspira intermedia PWS/A] MRKIFLVFALIFMTASVVLPQESAQEPLNIKDSLISLVRNTAFGGLFPRSEKEIADAQVKAEKSKQEKYQTKLNDIKVKSAPLWQNAIMICVGLLLVYLAIAKGFEPLLLIPIGMGGILANIPIANIAALPVVEIMNGIPVTISSGGFLGQIYTFGIESGLFPLFIFIGVGAMTDFGPLIANPKTALLGAAAQIGIFGTLLGAMIISTYIPVISFSLKDAASIGIIGGADGPTAIFTASRLSPHLLGAIAVAAYSYMALVPIIQPPIMKWLTTENERKIEMKQLRPVSKREKIIFPLTVIILVALLLPDAAPLIGALMFGNLIKESGVTERLSKTAQNELINIVTIMLGLSVGSKLAADKFLRFETLGILVLGLVAFSMGTAGGVLLAKFMNLFSKDKINPLIGAAGVSAVPMAARVANKVGQESNPHNFLLMHAMGPNVSGVIGSAVAAGVLLAILG >gi|343386499|ref|AEM21989.1| glycosyl transferase family 2, 1546904..1547842 [Brachyspira intermedia PWS/A] MKITIIVPCYNEELVIEILYKRLINVLSNYNDYEIIFINDGSNDNTEYIIDKYRKENNNIKLFSFSRNFGHQAAVSCGILNSSGDIAIIIDADLQDPPELIPSMIDEYIKSKSNVIYAKRISREGENFFKKVTANLFYRLVNLLSDIKFPIDTGDFRLIDKNIIDAYKQFKENPKYIRGLISWMGFKQQPFLYNRKPREAGKTKYTYKKMFNLALTGIISFSTKPLRISLILGILSILCGVILSLYVFIKYFFFNADIIKGWASIMITVIFMGGVQLLSLSVISEYLSKIYEQIKNRPEFIIKSNRETNYEK >gi|343386500|ref|AEM21990.1| glycosyl transferase family 39, 1547832..1549265 [Brachyspira intermedia PWS/A] MKNNIKRFTNTIISNKIFLISFILIILSYILRTILLIFTTLIDDEAYYALWTKHLPFGFFDHGAGIAFFMKSSMIIFGNTGFGVRFGSIIISILVSVLLYLFLRKEKDENTAIISVILFNTIPFFAGLSLIVTIDTPMFYFLLLAIMAYYKAIYSNKNYFYLAGFLFGFSLLSKEGAIFVGASISFFTLISKNRKSIFSSKEFYLSFIVAAIVYSPFIIYNFQTDFTFIKYALDRQLQKPGSINRTLDFWGAQIGLYSPLFFILFCYLIVKVYIDFFKKKEIENNFYFALISLLPFIYILQKSFKNKLEANWALFIYGGGIFLVSYYISKNWNKKYIRNLFLANILFCNIAVLIIICQYFFAIIPIKGDPTDRYYKYNAIRYDLKDYYDSYMNKDIRIFGLNYQIPSMINFYIHPEKESVCLNWGTYHPTVFDFWYNDKDFLGNDLYHITTSSDTNFISKYFDNVEYITNFQSYRKK >gi|343386501|ref|AEM21991.1| hypothetical protein, complement(1549429..1550391) [Brachyspira intermedia PWS/A] MINFEPISLEKQELYHKYFSMTPEQSADYTFMNLLGLKDIYMLEWAFTEKLVWIRQKSPYTIYWAPVGDWFNTNFCTDFSPCEISGETIIRIPKELALFWEKTTKIKVKETRDEWEYLYDFNELVTLPGKKFHNKKNLYNQFLKNEFKYVPINDKTVINDILDFEAKWEEEEKKNNAALNENNAEECETFDSTKLLTHEVRAEADTIMIKTLLGNWDIINNIIGGAIYIDNKIVAYTIADLSMRDTIVVHSERGDRNYKGTYQAINRMFLENLKNYVSDYERFKFVNREQDVGDLGLRKAKMSYNPVGYIEKYKGFCTDF >gi|343386502|ref|AEM21992.1| hypothetical protein, complement(1550463..1551020) [Brachyspira intermedia PWS/A] MKKILILNGSPRLNGNTSALIEEFTKGAKLNGNDIIKFDLDRMNIHCCKGCLKGGKNPDSPCSQKDDMDKIYPHYKEADILVLASPMYYWSFSAQLKIFIDRIFAVTEIDPNYKTPYKECFMLMAAEGNDDNNSKPVIEYYQSLLNYLGWKDLGYLIAGGVFNIGDIKGKDEFLNKAFEMGKAII >gi|343386503|ref|AEM21993.1| transcriptional regulator, 1551152..1551490 [Brachyspira intermedia PWS/A] MKKDNSKLKEKYMEDTGFAYTMSLISGKYKMIILYILSELNVVRYNELKRIISNISHKTLSLTLKELEKDDLVARKEYPQIPPKVEYSLSKRGKSLIPILDAICVWGEKNRK >gi|343386504|ref|AEM21994.1| ribosomal large subunit pseudouridine synthase C, 1551688..1552608 [Brachyspira intermedia PWS/A] MGDRFSYYSRNKWQDLIGQGLVLLNNSKVKYTRVVKKGDEIAYHIIGMKEPEVDKNVSIVYDDGDLIVANKPANLPVIPSGKYYHNTLHTIVKNMLNSNINMLNRIDRETSGCVVLSRSSKSASNFCAMLAGRKVNGKQYKRNSIKKTYIAIIENAKDIEDKFTVEGYMLESGHEYYRRFQTLHKENIEGSKYSKTSFKTIKRIGDYAVVMARLYTGRMHQIRVHLYSKGFFMVGDKIYGKYGPKVFDDFIEKGIIPENFFNRQALHAYSLKFNHPITDEIIKVKAPLPKDLKELIKKIKNNVKNK >gi|343386505|ref|AEM21995.1| periplasmic protein, 1552704..1553132 [Brachyspira intermedia PWS/A] MKKLSIFLASLFILSASSLFADMVVPPSALPQQATSFIQRVFPGTQIWKVERDGRKFDVQLSNGVSIDFLANGDWENIDSEYAPIPDAAFPAAVIQAVKNAYPQAAVIDAEKEWGNYKLKLNNMMELMVTGNGQIMRQKFDD >gi|343386506|ref|AEM21996.1| Predicted transport protein, complement(1553199..1554251) [Brachyspira intermedia PWS/A] MGLIVDIKKKLSNFDLDLQFEVKSGVFSILGASGSGKSMALKCIAGIEKPDSGYIECNGNVFYDSKKHINIKPQKRNVGFLFQNYALFPNMTVEENIKCGIRDKKNNIDIEYIMKKFFIHHIKNKRPREISGGEQQRTALARIFVSSPNILMLDEPLSALDYHIKWELEKFILSTIKEFNGTTLFVSHNRDEVYRLSDNIGIINKGKFDIIDSKYNLFENPKTYFSALLTGYKNFSKIKILENTKIECIDWNIILEIKNNNLENIENANYIGMRPYSFFDYDDNKQNNIYIKSKITNITEDMFSYIITLVPNNSENQITWRLDKNKYKNDYELGKEINLSFNTDDIIFLK >gi|343386507|ref|AEM21997.1| ModC, ABC-type molybdate transport system, permease component, complement(1554270..1554938) [Brachyspira intermedia PWS/A] MEYSPLILSIKTALYSTIITFFVGIYAAIIVVKIKKFSSLFDIIFTLPLVLPPTVVGFFLLLFFGRNSFIGGIVDKLGFPFVFTLRGAVLASFIVSFPLMYRTSKGAFEQIDKNIINAARTLGKSENWIFWRVILPNTWHSILGGTILSFTRALGEFGATIMIAGNIPNKTQTMSLAVYTAVQAGDRELAFKWVMVIVLISFVSIMMMNVILPLSDTIKKRL >gi|343386508|ref|AEM21998.1| ModA, ABC-type molybdate transport system, periplasmic component, complement(1554943..1555734) [Brachyspira intermedia PWS/A] MKKIIFITLLISYLFISCGSSNTADNTSKTNTENKEILVLAAASLTDVLTELANNYKTETGTTVTFSFASSGALQTQIEAGSPADIFFSAAQKQMDALQEKDLIDTDTRKDLLENKVVLISPTNSNLNIKSFTDMTNANVTKIGLGEPKSVPVGQYSEEILSNLSILDTVKQKAVYGSDVRNVLSWVRTGEVDCGIVYATDAQIANDINIIAEAPEGTHKKVIYPIAIVKSSANKEEAKKFIDYISNDKAAEAFKNYGFTVIK >gi|343386509|ref|AEM21999.1| molybdenum cofactor synthesis domain protein, complement(1555786..1556262) [Brachyspira intermedia PWS/A] MKILVITVSDRAFKGIYEDKSGAVIVKTLEDNLKEKITNIEKVIVPDEYDTILNTLNENKNNFDIIITTGGTGLSQRDVTPEATEAFCKKEVRGISDYIRQESIKDTIFATLSRGYAGINDNVFVVNFPGSKKGAEYCTNLIIPLLEHIISMMKGEGH >gi|343386510|ref|AEM22000.1| MOSC domain containing protein, complement(1556234..1556683) [Brachyspira intermedia PWS/A] MEKKYFKLISLNISKDTGTVKTPVESITLVEDKGVLNDAHFDKLKDRQVSLLAIEDIEYTNDKMKANLKPGDFAENITTKDVELYKLPIGTKMYIGNTIVEVSKIGKACHHGCDIKQLVGDCIMPKKGIFVRVIKGGEIKLEDTCYYCI >gi|343386511|ref|AEM22001.1| putative dehydrogenase accessory protein, 1556845..1557714 [Brachyspira intermedia PWS/A] MNNKQILDKALELINNNIEAELIKILKISGSAPRTLDAFMIVYKEDDKQKNIGTIGGGLLEFEALKDAYVLLDNKESSIKKYNLTPQEAGGIGMVCGGSAEISFVYLNDNKDMISNLKKEIEDKESNVYIFGGGHVSYDLVEVLYKIGFNCIVIDDREEFANKDRFPNASKIIVENYENVFDKISITDKDYIVIVTRGHSHDYIVEKNALKTNALYIGMIGSKNKIKTLHDRLKSEENYTDEMITRVHAPIGIAIGAESTEEIAISIAAELILVRAKAENRRKIKINLL >gi|343386512|ref|AEM22002.1| molybdenum cofactor synthesis domain protein, 1558062..1559282 [Brachyspira intermedia PWS/A] MARTFLHPNEALELVLKNSEDYGNEKISVLDSYNRVLVDDVYALNDDPPFSKSSMDGYAYKKEDENKNSYVLIEDKIIYAGLCDKIEVKSGECIKIMTGAMIPENCDAVQRVEWVEEKKEKKENGKTIINFTKKEITNNVIKKGNNKKSGDKILDKKMLLPKDVAILAGFGYNNVEVKKKINTAVISTGNEIANIGESLKEGQIYDANAPMLVARTSALSCNSKFYGKVNDDEKEIKEILSKALEENDIVLISGGVSMGDFDYVHKELLELGVNQIFHGVAMKPGKPLFFGKLGKKAVFALPGNTVSSFMTFEIMVKPYILNCLGINYDTNYIKAVISEDFKRKDTERLEYIPVHLFFDDTKLLVKLIKYNNSSMISSFSEANGILKIDIGISDIVNGSIVDVRFL >gi|343386513|ref|AEM22003.1| molybdenum cofactor biosynthesis protein A, 1559266..1560063 [Brachyspira intermedia PWS/A] MLDSFNREINYIRVSVTDRCNLRCVYCMPEEGIMKKTHSQILTYEQIYNVVKEASELGVKKVRITGGEPLVRKNIDELVAMIRTIDKVDIIAMTTNAVLLDGIAEKLKNAGLDSINISLDTLDSERYKYITRGGNLYDAMKGIKKASELGFQLKINVVVYDEKSKEELPLLKKYAESINAKLQTIQYYNLNSQKLDSIDYDRPARCKYCNRIRLLSDGYLLSCLHSNIKFKVDFDDIRGSIIKCIEGKPENGAYSDAESLSMIGG >gi|343386514|ref|AEM22004.1| Molybdenum cofactor biosynthesis protein C, 1560089..1560538 [Brachyspira intermedia PWS/A] MSDKLTHIDESGNANMVDVGDKNIVKRTAEATGKIYLSKETLKLIEENNIKKGDVISVARIAGIMGAKHTSELIPLCHNINIEKVSLDFTLEEDGIVIKSYCRCSYKTGIEMEALTAVSVAALTIWDMCKAVDKNMRISDITLLSKTKS >gi|343386515|ref|AEM22005.1| hypothetical protein, complement(1560617..1561303) [Brachyspira intermedia PWS/A] MKKFLLMLLMSASAFAASGFESALNIPLLISVGIPIGNSGERRNVDVVLNSGITAQLGYGLYLDNGIGVSILGEIGYAFNQFANYYPDRQYKESVINSFHSLQLGLLPKFNIKNISIGLGGGLKIPFSGTIKTYNEYSSSERSTYYTDMNFQYIRDTYNQMFVIPYIKLTFDFYTPEFDEDSGTLSDSSDAGIGLYLGYDFGPKGKNNVGSDSFTIGAQFSFRIKPVD >gi|343386516|ref|AEM22006.1| methyl-accepting chemotaxis sensory transducer, complement(1561470..1563302) [Brachyspira intermedia PWS/A] MLGNNKSGIGNNSLIFKFLIPYMAALFIICVAIYILYFPQYKTRFLNSNKYNAYNISSEIENNISSLYGKINIFYSYVEKEVNRDNLLNVFRNIIKNETDLINIFYADTIPYKDGGTVLNTIGELPNDYDQTSREWYKNAIASREIVVSEPYVDVVTKSIVVTFSKTIYVNGQINGVVGIDVDFSKIISSALEEAKKYNYNLNIINKDGLYIYNQNENYILKENIFNNKEISQYRNDIINNNNYGWIDKKISYISSKIKNSNWNIIVSLDNKELNSSLLKLLILIISVFIILSAIEATLVIVIAKPISNTLDNTISIIKSMSKGNFNTHFDEKELNKKDQTGDVIRALNDMQNKLGDIIYSMKDNINGINNSVNIITNGNIDLSDRSTSQASSLEELTRSVEFVFSSLKETAENAGNAKNMSEKVSNATRNGVNAINATSENMALISEASKKISDITKIIESIAFQTNILALNASVEAARAGDQGKGFAVVASEVRNLAINVGNAAKDITAIANETIEKIQNGSASVQASSYILNQIEASVNDVLTLLTEISSAIIEEENSLSQINSAVIEINRITQDTSKIANDGANASKDVLDKSNNIVDQVSYFHFN >gi|343386517|ref|AEM22007.1| ABC-type oligopeptide transport system, periplasmic component, 1563563..1565152 [Brachyspira intermedia PWS/A] MVIFVFFISCGGGSSKYEEGVLRLNVGPEPQTIDPTLNSAIDGSMYIIHAFEGLATKDKEGKIVGGVAESWDISDNGTKYVFHIRSNAKWSDGKPVTANDFVYSWRRATDPKTAANYSYQMEPLKNAKKITAGEMPVDSLGVKALDDNTLEVTLEAPIPYFDQLMAYPVYFPLRQDIIEANPDSWTMSPETYIGNGPFKMTERSIDNQIVMEVNTNYWNVSAIVPKKLIFVLMDNGTSVVAGIKEGSIYFSDRVPTQDMNVLKEEGYLQIKPYLALYYYSLNNTNETLKDVRVRKALSLAIDRNYIVEQVTRGGQIPAAAVVPALISDVSGSFRTNGGDYYSVKPEDYTKNIEEAKKLLAEAGYPDGKGFPVLDFKTNPGEHTSIFEAIQQMWKNNLGIDSTISSEEWAVFQQTRLDKSYVIARNAWVGDYDDPMTFLGMFLSHSAQNAEGYNNPQYDALLAQASSTGDNNVRMPILHKAEDLFMSEMPIIPLYFYTLPVLVNPNLKDVQYDVLGKHKFFYAYLENNEN >gi|343386518|ref|AEM22008.1| aminoacyl-histidine dipeptidase, 1565284..1566723 [Brachyspira intermedia PWS/A] MFLNNFDNLDSKEVFRWFAEISKIPRRSKQEKQISDFLVQFAKDRNLEVYQDKVNNVIIKKEATKGYENIAPVIIQGHMDMVCEKTSESKHNFDKDPIELIVEGDVLRANDTTLGADDGIAVAYGLALLDSKDIPHPALEILITTDEEDGMSGAFSVTDEHLNGKTLISLDSEAEGVLWVSSAGGINAVVEFNIEREVNNNPALKIEIKGLKGGHSGMEIDKQRANSIKILGRVLYSVKDYINISYIEGGSVHNAIAKSAYAVITAEDTNKVKNIIEELYKKIKFEYRVIDPDMEIVISNAENVKECYKKELSNNVINFMMLSPDGVLYMSKDIEGLVQTSANNGVLKEKDNKLIFTIFIRSCVESSSNEIVARVKALSSLTNASFIDQDGYAAWEYDPNSKVRDIAVKAYKTVTGKEADVSSVHVGLECGILKQALKDVDIISMGPNIYNVHTPREYLSISSVDRLWKVLKEIIKNIK >gi|343386519|ref|AEM22009.1| cysteine synthase A, 1566816..1567730 [Brachyspira intermedia PWS/A] MIYNSILDMIGNTPILRLKNIESKFNLGENVELYGKVEKNNPAGSIKDRAVKQIILDLFKEGKLKEGATIIEPTSGNTGIAMAAIGKYLKLNVIIVMPSSMSEERRKLIRNYGARLELVDGGMDAAVKRAEQLNKKIPDSVIPGQFVNGSNVDSHFLTTAPEIFSDIPDVDYIFAGIGTGGTITGIGKYVVDKNKNTIVVGVEPESSPLLTKGRASAHKIQGIGPNFVPEILDLNVISKIMDVSDENAINTARDICFNEGLLVGISSGANVYAAIDLYRNLRKKDYKIKMLCILPDTGERYSWN >gi|343386520|ref|AEM22010.1| serine acetyltransferase-like protein, 1567730..1568470 [Brachyspira intermedia PWS/A] MGTFMKLKTFNELPNQKDIRDIVKLIRDYTFPNFFRESPNRDIVKKSIAKLYMKIVTDDSRLLDFIEQLDDIVISLEHDLEFFYQSDPASKSYDEIIFTYPGFRAIFHYRIAHIFYKQNESLIARTISEFAHSKTGIDIHPGAEIGDYFFIDHGTGIVIGETTVIGHHVKIYQGVTLGALSLTNGRALEGKKRHPTVCDNVTIYANASIFGGNTTIGANAVIGANCIVLESVEENRKLTLNDNMSV >gi|343386521|ref|AEM22011.1| 2-keto-3-deoxygluconate kinase, 1568925..1569947 [Brachyspira intermedia PWS/A] MASVVTFGEIMLRLSPPSNLRFVQANSLDVRFGGGEANVAFALSNFGIDASFVTKLPNNDIGHACINELRRYGVDVSNIVLGGNRIGIYFLEKGASQRGSKVIYDRANSSISQCTKEDFDWDKIFDGAKWFHLTGITPALGKNVAEVCIEACKKAKEKNITISLDLNYRKKLWTSKEANETMSKLMPYVDICIANEEDAEKVFGIKAKDSNIIEGKLSHEGYKDVAKEIVDRFKVKKVGIALRGSISASENLWSCMLYNGEEYFFSKEYLIKIVDRVGGGDSFAAGLIYSLLNGKDDREALEFASAASCLKHSIEGDFNVVTVDEVMTVYNGDASGRIQR >gi|343386522|ref|AEM22012.1| ROK family protein, 1570033..1570989 [Brachyspira intermedia PWS/A] MKEVVIAIDIGGTSMKGAVIEENGNILYKDNFDINPSHTTEEHKKVITEFVEKLKSNIPNDYKPVGLGIDCPGVMNRETVHMGGAENIPGLKGLKFSDIGDKFNLPTKTANDASMAALGEAKYGSGKEKDYQSVMFVTLGTGVGGGFVLNGKLFTGSLGGAGEIGHVFVVPDGDKCNCGSSGCIERYASATGFIAMAKQKIHKGVIPTTLTYEELDKGKAKALFDAAKKGDALAKETIAECSYYLGMSIAQALNMLDLDLVLIGGGLCKDFDMMIEHINRGVRNYGLRMMVANLEIKPASLGNDAGVLGCAALFFRNN >gi|343386523|ref|AEM22013.1| 30S ribosomal protein S2, 1571220..1572041 [Brachyspira intermedia PWS/A] MIMSLPVMKDLLEAGVHFGHPTRKWDPRMKPFIFQERNDIYIIDLMKTLTYVKKAHEAVKEMARNGGNVLFVGTKKQASQSIKEAAEKCDMYYVNNRWLGGMLTNFATIKKSIARLKKIEKEEVDGTFDKLPKKEVILLLKEKERLEKNFAGIKDMENLPDMLFVIDPMQEAIAVSEARKLGIPVVAVVDTNCNPEVIDHPIPGNDDAIRAISLFAGVVASAVIEGQNEAGKETLAKHESSSDEAAEEVYDNSATEAAEAVAEKYGVSQEDDQ >gi|343386524|ref|AEM22014.1| elongation factor Ts, 1572088..1572942 [Brachyspira intermedia PWS/A] MANISMDTIKELRERTGVGIMDCKKALQETDGDMDKAIRLLKEKGAAVAAKKNERTVKEGSIGFCVNDDKTKVACIELQCETDFVAKNELFINLAKEIANTAMGLDDVSVETVLNAKGSNGDTIQGMINEGIQKWGEKTVLAEAKVMKTDGFFGTYAHFNNKLVAIVEFDVKPKGKCQEIADQIAMHVASEKPLALNREGIDPNAVKEQKEIFEKQVRDAGKPENMIEKIVDGKMSSWYSESVLIDQKLFTDNKISIKSLIDEVSKEAGSTATIKNFVIVSLGL >gi|343386525|ref|AEM22015.1| hypothetical protein, complement(1573040..1573606) [Brachyspira intermedia PWS/A] MLKKLMIIIFSLLFIISCNNNVSNPNDSSSNGNNNNNDGNEDVFDVNNYTNAYDSKFNETFNQIRDFEGLSFSYGAPTASINKTDNILIIPYVGMSHPTTMKYCFIEAIVDDTGTPKIIETSEVKTIIYGSHQREDGSYASDTGEAYIDFPNYKYNDYGNYKPTRYLMIISSENVSVSGGNYPSYAKF >gi|343386526|ref|AEM22016.1| hypothetical protein, complement(1573616..1574449) [Brachyspira intermedia PWS/A] MLIFVFSCNKKTTDPTSNNGGNDNGNITSKFDPSEVEILIPVTYYLNSRVSGNLTSFKSVQSETGKTVYEIPITFNDERLLDEIDYIRVSYKGVNVRDTALTEYRKEDLGDYLKTYLVSLTNESSGEVNELYLGLYTELQFSKYMVKRSAIDLCTFHYNDTLGYYTNSYSHRSPSLKKYEQYDKIQLKNDIITAFNESVIRPDYSSIYYPRYDYEFIGDFLVEDNVADNEINEWMRPAANYKRLTFKVKPRAFKGYRFTDKENLKEYSVLVYLKKDE >gi|343386527|ref|AEM22017.1| TPR domain-containing protein, complement(1574926..1576287) [Brachyspira intermedia PWS/A] MEASLIVILVLIVLLGFATQYVIKSGSYPIKLKKIVQAYNEQNYDVAMREINTLDPKYKKDANILWMTANMYYKQQQYILAMAALQNMIDGAYFTKELTELSVREFLAKIYEQTGNSKKAIDEYDMITKIRDQDYDSLYKAGVVCYNYGEWVQAQKYFSLAVAQNDSNPQLLYMLAFCFYKIRSYHAAQQQIEKAIALDNSNPEYHLLLGEILSSSRDFQNAIKELEIAYESNEISDKDAISLNLANSYYELGNFSKAREYYGQVLTKENIASEKVVDERYRYAETLVKNKQFEAAVKQWEIIKSIRNIYLDVDQKLKTYSSIIANNAFRTALEMDIIEYLEKYFYRILTLNGYVVTDHTKKSDTLVFFVTIKKFGSEGQSYKSTFALDTSGYPMRQDTVDQFMEYARQYKSAHSFLISIGDFAPNLKVDDTVMIIEPERFEAIIEGVISFSD >gi|343386528|ref|AEM22018.1| hypothetical protein, complement(1576302..1577342) [Brachyspira intermedia PWS/A] MEDKQINLSKSYIYGFFAAMICTLIYSAVIIPIYILLISPNTQNFFVYLLYALDVWVWIWIGISILYAFIIVLMQPTKSYTGVSRTIENLLFFVVTSVILILSLSYVPEVQKLLYKRDYTFYSSILAIGLFFISIQLSYNLKKLMIFMYKTILYNLGYNIGDDTVEEDNENYYENNEYEIVRIDKSEYEIFSSTIKNIIAFSQRYKHAIGIIAFKISNASSIREEYGNAAYRKLEDELIKAIKKNARIGENQCLLYEGIIYSVIFANEEEAWKATKRYFKALKNYNFEYNDESVDINVSMAVSGFDFSHNMSNKMSVFVVKDNMMKKIKDALNESEETGSPVIYYE >gi|343386529|ref|AEM22019.1| L-lactate dehydrogenase, complement(1577367..1579514) [Brachyspira intermedia PWS/A] MKGKRIIIIGAGLLQVPAIQIAQEMGLYTIVFDYNKDAPGMKIADYPMIVSTRDVDGSVRAARDLSQKMEIHGVITVGTDASTTVAAVANALGLPGNRFEDAYAASNKIRMRERFKKNNVPQPNFFPVWNYEEAMDAYKHLNTPVVVKPADNMGARGVMKVSSESDVLAAFNRAKSASPSGEVIMEEFMDGPELSIDMLIYNDEIYVTGVADRIIEFPPFFIETGHILPSALEKEKLDDAINVMKAGIKALNLKIGAAKGDIKVTKNGAMVGEIAARLSGGFMSAYTYPFATGVNLIKNAIEIALGNPPSDLKPKWDKVSVEKAFLPGTGIIESIDGIENAKKIEGIKEIFIKTKPGDILVTPTNNLEKAGNIIAVGNTRDEAIAMANKAMSCVHFKLTDEKSITIDEIKKIAKEKLSSNSNASYLFVEDSEDKTGLSEYNFSPSIIHKEPEANIEINLFNMHLSQPTIIDTIHNLREAINGIMDIKEYYETVIDVASNCEVLAIFNDFNDDEIFELSLKTIKGRKRGIIMIDGNNTQEIITQKLQSAEKNGACAVGIDFTYCYNINELNKIHFKTEKDLAKIAKQLDIPLIIKGISSNRDLDNMKISHINNVYFSNNNKYALKGMEKVADTVNKVDFNSNHHFNILAESPRYGVDVFKYLVLGANAVCVTEESFISIIGKGRKGLEYLLYSNRDKLEKMIKLFGQTGDVNYIKY >gi|343386530|ref|AEM22020.1| hypothetical protein, 1579778..1580989 [Brachyspira intermedia PWS/A] MKKLLFIYLSIFTVFIVSCGNKVLNPSESVDGITYYDVNNAETAKFNISVFYDDPNKPEVLNDIEFKKIAESGNAIVYIQSGQSFDINNVKKCFNKFEANYDEEVKIYGEPISFPNINNDKVVFLIYDFYPKSDLSGTGFSNSDDLQNNAKTINHGKYLYIHSKYLEDPDNVAATMMHEFQHLINASVNLMNGKKAMDLWLNEALSESTSVLFAPAMYDNRASGFNSFPYYSFYSWYIQGIIPINGLIQISYCSSSIFMKWIEHVGGIETINKIAHSSPLLDTRTRLVNSVKGLNIGNSVEEIFISWIKDIYKGNLPGVQVTEIPLDPNNNPLIIPGQGFPLVPGAFIIYNANKYNLNNTSIKTELLDAEKNIYLAWNPNFDSVDVEGTIDPSAVMWINATPK >gi|343386531|ref|AEM22021.1| hypothetical protein, 1581304..1582539 [Brachyspira intermedia PWS/A] MKKLLFIYLSIFTVFILSCGNKVMNPTESVDGIVYYDVNNTETAKFNISVFYEDLNKPEVLNDIEFKKVAESDNAIVYIESGQSFDMNNVKSFFNKFEENYDEEVRIYGEPISLPNINNDKLVFLIYNFFPKYPLAGGGFFNISDLYDNKKDPVLNKGKYMYIDIKFVKEVNIVFGVMLHEFQHLINVSVNRVNEKQTMNLWLNEALSESTSVLFAPAISGGRNKIFNLLPYYSFYSWYINDIIPTRSSFDAINVSYSSSSVFMEWILEKGGKEAIRAIANSDPSLETRARLVNSVKDLNIGNDIEEIFISWIKDIYYGRLNQFTVRPFDFWDDTYSNLLMDPNKGLALVPGGFIIYDANKYNLDNIQGLKKQVLDAEKNLYLVWNPKFDSVDAEGHVSENDVIWINATPK >gi|343386532|ref|AEM22022.1| hypothetical protein, 1582853..1583062 [Brachyspira intermedia PWS/A] MKKLLFIYLSIFTVFIVSCGNKVMNPTESVDGITYYDVNNTETAKFNIANFNENNGIDSIASSEFKKNC >gi|343386533|ref|AEM22023.1| hypothetical protein, 1583109..1583660 [Brachyspira intermedia PWS/A] MNTVKELFTKFEANYDEEVRIYGEPISFPTINNDKLVFLIYNFYPKSEGYFAGFFNPSDFYDDKPDTLNKGKYMYINITTISYTDEIVGTMFHEFQHLINASVNLINGGKAMDLWLNEALSESTSVLFSPFTADDRKKIFSLFHYYSFYSWYIDGTINYPIIINGVQIPNIYISYSSSSVFMR >gi|343386534|ref|AEM22024.1| hypothetical protein, 1583736..1584215 [Brachyspira intermedia PWS/A] MVNSVQGLNIGNSVEEIFKSWIKDMYNGKIADVKFGVMDFMDNTYDSKLMDSSQRLPLAPGGFIIYDANKYNLNNQSIKTEPLDAANNIYLAWNGNFDSVDVEGKINANDVIWIAPIKISTTPSSSKSEMLNFDYSKFSRMPIDKVLTPEEVIEAKSRK >gi|343386535|ref|AEM22025.1| hypothetical protein, 1584435..1585778 [Brachyspira intermedia PWS/A] MNKNIIFIFSDQQRWDTMGIYGQKLDTTPNLDKLGKESTIFNNAFTCQPVCGPARASLQTGLYSSKTDVFVNAIPLNKNIKTIASYFSENGYQTAYVGKWHLASTGVGNDGSSEDYIYNPIPEDKRGGYKDYWVVSDALELTSHGFGGYLFDKDMKKVEFNKYRVDAVTDYALDFLDNREKDKPFFLFISYLEPHHQNDKRRYEGPEYSKEKFSNFELPKDIEALGCGDAKENYADYLGACHSIDYNFGRIREKLEKLNIWDDTYIVYTSDHGSHFRTRNKNMPKNGQDDYKRTSEDAAIHVPLIIKGGEFDTGKREEKFVSLINLPPTLLKMANIKYQNMDEKSIQDIIEDKNYQNVVFLQISESFVGRAIRTEDYSYCIYDPDKNPLEDKDSLTYKSYSLYDLKKDPYQLNNVVDDESYNDVKMKLKSIIKEKIMSIEKLDVKID >gi|343386536|ref|AEM22026.1| putative extracellular solute-binding protein, 1585981..1587267 [Brachyspira intermedia PWS/A] MAIISCSKKTSDSNADAWTEITPDTETTIEVWAWNIGANHLEDTIPSFNAKYPKIKVNVTEFGGPPALKQKLFVTLGGNSELPNYVQIEDPDIALITEQYHQYFLDLKDQMPENWSNVVEPSKIPTSFDSAGKQVVMPWGIAPAVLFYRADLFEKAGIDVNSIVTWDDFIEAGKKLQAALPNTKMIGFPHPTGYSHFIRATMLQQGKDYFDKDGKISISSKEGVEAAKLLQRLISEGIAFDTTDWTGTIRASKTDDIATIPYGIWWGGTLKDQAPEMKGKWKATFLPVLVEGQPRTSIWGGASGSIINCGDPVKQTATLEFAKNAILSVENQMMAFKKYGLLPAYTPVYDEEEFYEEDPYFGKGFNELIPQLSKEMPLVAKYTEAFPDAQTMMESAYQDLVNNNADPVKTMENVAKELNNSTGIEIAQ >gi|343386537|ref|AEM22027.1| putative extracellular solute-binding protein, 1587340..1588659 [Brachyspira intermedia PWS/A] MSKKLLIIVFSILFVVSCSKKSSDNVDAWIEITPETETTIEVWAWNVAANHLEDTIPSFNAKYPKVKVNVTEFGGPPALKQKLFVSLGGNGDLPNVVQMEDIDTPLITEQYHEYFLDLKDQMPENWSNVVVASKIPTSFDSTGKQVTMPFGIAPAALFYRADLFEKAGIDVNTIVTWDDFIEAGKKLQAALPNTKMIGFPYPQGFSHFIRATMLQQGKDYFDKDGKIAIYSKEGIEAAKLMQRFVNEGIAFDTTDWTGTIRASKTDDIAAIPYGIWWGGTLKDQAPEMKGKWQVTYLPVLVEGQPRTSIWGGASGAIVNVGDPTKQTASVEFVKNAMMTIEGQLIAYKQYGLIPTYLPTYEDAKFLEADPYFGASFNELLAELVKAMPLSAKYTESFPEAQTLMESAYQAIVNDKADVEKTLQSTAEQLQNSTGVEMAK >gi|343386538|ref|AEM22028.1| L-arabinose ABC transporter, permease protein AraP, 1589245..1589865 [Brachyspira intermedia PWS/A] MLITSTLLGSIIHRGVKKLKSFFEASYFIPVLVDAVAYSMIFLLIFQDRGIINFILSKFGIDAIPWLKQSIPAKLLIVIVVTWRWTGYNMILFLAAMQNIPEDYYEAATIDGANSWQKFLYVTLPSLKPIILFTSIMSTIGTLNLFTEPFLLTNGGPNNGTMTLGLYIYNQAFVSLNMTYAATISVIILLIVGALTFIQLKLGDKK >gi|343386539|ref|AEM22029.1| hypothetical protein, 1589865..1590692 [Brachyspira intermedia PWS/A] MDKKNKIITIILYVFLSIGAFFSIYPIYFMFVAATKSSGEIFMNTPPVFFGNYFFENLNSLSNRIPIWVALFNSLKVSIIFTVVNLLLCSLSGYAFAKFDFKGKNFLFTCVLLSMMIPVYSRLIPLYRMMTFANLQNTHIALILPGLAGAFGVFLMRQNFLSIPDALIEAARLDGASEIYIFFKIVMPLMVPSLAALGIYIFMGQWSDFTWPLIILNTEDMYTLPVALSVLKGDTRIDYGQIMVGAIFAVLPVLVAFLFSSKYFISGLMGGAVKE >gi|343386540|ref|AEM22030.1| sulfatase, 1590929..1592353 [Brachyspira intermedia PWS/A] MNNKKPNIILITADQMRADSVEYMNEEVKTPVLNELAENGTVFTNSFCTSPVCTPSRASIFTGRYPMNIGAWNIGTELNEDEITLADYLKEENYFNVASGKMHFRPQLKNLNWEFEDVPKRDRVRERDKTYYGFDITHITEDDKQGEYLDFANSHGGNLEIGKGYDGVNPIKEELHQTYWTAQKAIDEIDNYNFDNPLFMWVSFVDPHHPFDPIKKYYDIYKDINPKELNSKLKLDKKRPEHLTKQGERGYWPGGGEEHNYSEEEIKEIKRLYYGMISFIDSQIGRIIDKLKEKNEFDNTIIVFTSDHGEYLGDYGLLKKGPFMYDCLIKVPLLFYGKGIVKNRSDEIIENVDIVPTLLDMLGKEIPYGIQGHSLKNILTGEDKNKKYKKGAVITYDAHDRGIFIKTYRTKQYKLSIFLDEEYGEFYDLEKDPNEENNLFFNKEYDEIKNKLLLEMCHKMIECSDPLNKRYASW >gi|343386541|ref|AEM22031.1| putative ABC transporter periplasmic binding protein, 1592443..1593435 [Brachyspira intermedia PWS/A] MFLLASCANKGASSSGDAKTLKVAVMPFLNSVPIEYMINNKLDEKYGFKIETVYFPSGGPMNEALGAGLWEVGTLSAASVYSLANYNAHVVADIGHSEGGIEVLVNPDSDILTVKGVNKDFPEVYGDAATLKGKTIAVPTGTISHLNVIHWLRAINVDPNTVNIVHMEFPQAYQALKAKKIDAAALNPPTSFSAEADGMKIVSSLTTLNIPQYDSIIVSDEAFKNKKDTIVLYIKAFLEACDALQADPNMAAQELLNWYTKNGSTSTLEACQSEVKTRPFVTTEEIKNIKIGDSVRITADFFASQSLITEDKLTVVDQNVDTELLGKALN >gi|343386542|ref|AEM22032.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease componen, 1593473..1594303 [Brachyspira intermedia PWS/A] MEENIENISLKEKEKIVIANKKKEKSKFFIISVISVVVFLIIWQLITDVFKLFPSYSLPSPYTVFKSFIYKLTNKAPDNGTLFQHILASLQVALTGYFLGAAIGIPLGICMAWFKKFNLVATPLFDLIRPIPTIAWIPMMILWFGIGLGAKSAIVFMSAFVPCVINTYSGIKATTQVHLWVAQTFGASRRQMLKEVAIPTALPYIFTGLRVSLGSSWTSLCAAEMLAASRGLGFMIQLNRQLARADLIIVGMLTIGAVGAILSVGLGYLEKKYVKR >gi|343386543|ref|AEM22033.1| ABC-type nitrate/sulfonate/taurine/bicarbonate transport system, permease component, 1594317..1595117 [Brachyspira intermedia PWS/A] MKNKEKTRLKLSDFEKPIWAVISIIGFLIVWQLLTTYTPIKITTPKPLEVFKFLVWSLTHNIGQQTILGHIVISIFRVLTGFAIGAVTGVILGISMGVNKYARAIIRPFFEVFRQIPPIAWIPMAILWFGIGEVPKVFIIFIGTFVNVTLNAYAGSSQVNPTLIGAAKMLGSNDRDIFLHVILPASVPQIFNGMQVGFSVSWMGVLAAEMVSSFAGVGWVIIRGSDTANIPQVLAGMIAIGIVGLLLSSLMRYIEKRLTIWNSTGI >gi|343386544|ref|AEM22034.1| ABC transporter related protein, 1595139..1595897 [Brachyspira intermedia PWS/A] MENKTIIKMNHVNKVFFSEHGYKEVIKDISLEVKENEFVVLFGPGQCGKTTLINLIAGLETAENSDIEVNGKKVTEPHPERGVVYQTTALFPFLTVMENVEFGPRARGIPKKERREKAKYYIDLVGLNGFENSYPNQLSGGMRQRVGIARAYCNEPVVMLLDEPFGHLDAQTRYMMEEEVEKIWQKEKRTVVFVTNNIEEAVYLGDRIILLTNCPTVVKKEYIIDLPRPRRLTDPNFLKIRNEINDNMDITL >gi|343386545|ref|AEM22035.1| ABC transporter ATP-binding protein, 1595916..1596668 [Brachyspira intermedia PWS/A] MTNDTREVKVKVSRLTKKFGDLLVLNDISFNVMKGEFLCIVGPTGCGKTTFLNSLTKLYKPTYGAIQIDGEHVDLKKHDIAYIFQEYSTMPWLKVEENVKFGLKIKKLPQDVIEERADRVIKMVGLESLKTFNPSELSASMLQRVVIARAFAVEPELLLMDEPYGQLDVSLRFKLEDELLNIWKTLGTTIIFITHNIEEAVYLGERVLVLTNKPTSIKKEIHIDLEHPRNIADPKFVEYREEITELIKWW >gi|343386546|ref|AEM22036.1| transcriptional regulator, complement(1596731..1597765) [Brachyspira intermedia PWS/A] MATIREIAKLAGVSIGTVDRALNNRGRIDPDVEQKILDIAKSLNYKPDKIAKSLAIRKKKFKIAAVLNTYNNLFFEDVIKGIEIAGKEIEEFGMSVIIKRCKDFDADNQLELIEEAINEGANAMAIVAINDERVINKISQLHNNNFPIVLLNSFVNSKDCIAYVGCNYDLAGEIAASLLNIISNGNNINLLVFSNNFNKMLGNKKRVDSLVSRLNSDYKNVNVQSIIEMEKDNNLNFDKSKDNLLKHMDTDVVICPGAETSKYVINAIKELGLYNKIKIITYDFSEVVKEGLLDRGIIASITQNPQEQGYRAIKVLFEYLLTKTIPDKRYTYIETQVIFRENLL >gi|343386547|ref|AEM22037.1| type I site-specific deoxyribonuclease, HsdR family, 1598072..1598200 [Brachyspira intermedia PWS/A] MYDAMLSPINTDYNKKEKIKTMSKKLAVIIEKNSEYIDWQSK >gi|343386548|ref|AEM22038.1| hypothetical protein, 1599069..1599599 [Brachyspira intermedia PWS/A] MKKIILLILTLFIILVACKNDGGSIYAMEQRYRNFLNILPDDVKNDYTLNSDKYGNMYKEWINEFNTWTDNILNEENKREQEISARITPDKIEYALETLTSKDYERNLPVDLMAKVKVHTDQLSLKIDELQKDEAFSNSMIKLKKYEAVENFTTEDTIFYYVWNYLITIERPRRFQ >gi|343386549|ref|AEM22039.1| hypothetical protein, complement(1599560..1599682) [Brachyspira intermedia PWS/A] MQTNINTIYYRRKSKISSIIRTKLNDYNHWKRLGLSIVIK >gi|343386550|ref|AEM22040.1| hypothetical protein, complement(1599872..1600591) [Brachyspira intermedia PWS/A] MIKPKEVTMNRNEILERYNQILNNINAAKQKYNIEYDINVVAVSKYSSIETIKEFLSLDIDLPLGESKAQSLRDRAGEIAQLKNNVKWHFIGRIQSNKVKYIVRYADLIQSVDSVEIAEYINKEAIKNNKVQNILLQFNISDEDQKGGFNINNYIDIYENIIKMSNISVKGLMGIGKDSENLLLIEEEFEKLNTIYKSINLKYNNPLSILSMGMSSDYELAIKHGSNMIRIGSSFLGNS >gi|343386551|ref|AEM22041.1| hypothetical protein, 1600762..1601217 [Brachyspira intermedia PWS/A] MRVQERRNREMNLNSLLMTSQDASMKVAVSSSPFAAMLEEEKEIKRYSYELDELKRQIYDAGNMLEKSANMKDFQKFRDLIRSLTDKLVKDAYRIRIVSSYMRRGREYQVVSKINEELDSLYRLIMSEQKNHIAIANKVMRLKGLVLDLMS >gi|343386552|ref|AEM22042.1| inactive metal-dependent protease, putative molecular chaperone, 1601214..1601915 [Brachyspira intermedia PWS/A] MNILAFDTVSSSFSIALQKYDDSILEYNKEDVRNHNEEILPVLNNFLKENNISLDKIDYIVLGIGPGSFTALRIAFATVKTICYAKNIPIIGISSLETLYENIKSYEGIKASMIDARKGSIYTDIYSGNNKIKENLDITYEEFINIINSIENNDKTLTLCGDGFYKNQDYFKEKLKNYKINDIDKSFNIIKASNSIRLSIPRIKSNNFDNIFNLLPLYLRNSEAENKKMNEKQ >gi|343386553|ref|AEM22043.1| methyl-accepting chemotaxis protein McpB, 1602105..1604186 [Brachyspira intermedia PWS/A] MLLVTVMTIILVTLIINIGSQGIRSSAIFGFESTTKVYSRMINVWLGQAIFTSEAISSGYPEFITYITTRTPESKAAVEATLKNIVANNHNVEGIVILDGAGNVIADNLDGKVVNTARNFSGTELWQKIMTGQSSMHYTVDPSPADNNKYVVKIFSPIKDSTGNIVGAISTMIDWLGFIDKELTLVKFGNTGHPFIVDKDRWVIADPIPSHVRSEVLRNADYIKYAVENESGYYEFKSPFNDKDSIATFYREPISGWSVVMSIESAELFSHITSMKRYAIIGTIIILVIASLVIVFYINKITTILHLLAIDLTSLSKGDLSWSTPPGFEKRKDEFGEIAVALINILDQLNEKVRIVYDGAYTVKASANEVAQGNIDLSNRTENQASGLEETASSMEEIASTIKSSAEHTLEGNNMMINSKKAIEEAGRIIEESTQNIEAVYESSSKISAITKIIEDIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRNLAQTTQTSVKDITTLVADSEEKIAAATETARESKEIFQNLRVQIEETAKIMQDLSSTAMEQQAGVDQVNIAITQMDMTTQQNAALVEEATAASEALFSQAEELLSAMEFFKLRGSNYKKNISKVERKKATPTTDTKAVQENKPAPKSEPQKPVTKKPELKSPIKKHHEEKMPAPTPARTVKDNEFGNTFDTSKDTSDGFESF >gi|343386554|ref|AEM22044.1| rhodanese-like domain protein, complement(1604256..1605284) [Brachyspira intermedia PWS/A] MVKVIDIEEFLKLANNDELPIIDVRSPIEYNHAHIPNAHNVYLFNDEERKDVGTIYKQIGRKEAILKGLEYVSVRMTAILKSIDEIAKKYNSTNKILMHCFRGGMRSESTAWLCSSYGYDVYMLKGGYKRYRNYVLDSFERDYKIYLLTGRTGSGKTLILNKLKSIGYNVIDLEKIAKHKGSAFGWINEGEQPSQEQFENNLSYELLKYDINSTLWFEDESLLIGRRAIPKSLFNKMREAQKIIYLDIPKECRAEYIVNTYGKYNIDDLKESILKIKKRLGGERLKESLELLDNGNIYECVLNMLYYYDKAYKLSINENKLVSIKCENNNFDNIVESIVKAI >gi|343386555|ref|AEM22045.1| hemolysin III putative, complement(1605344..1606018) [Brachyspira intermedia PWS/A] MEKSAFYIDVQNRYHKSKKIGELYSAISHGIGALLGIAGLVLMLVKTKVNPIPIIIYGTGIIFLYSFSSLYHFFPDGKVKQLFRKFDHIGIYVFIAATYTPVCIFSLPRNVGILILSVIWSCALIGILSNTVIKYKNIVLRLVLYILMGWIIIFAFKPLMNRFDIMHLNWLIWGGIFYTIGAFLYALGKKCNDKTKQFTHDIFHIFVLMGSFAHYWFLYSYVIN >gi|343386556|ref|AEM22046.1| hypothetical protein, complement(1606158..1606766) [Brachyspira intermedia PWS/A] MKLFLLFPLFFFMLSCVTAPEIYLNNNVIHWKEYVANKSSSDIYQNIYRFDKNADMDFIVYGYKSKIKYKLFLMKESDEAFYYKNTTLKSYIIESLPSLNLYEDALKNNDNSRLYINDYFNRTFSDRSIYLPIGLAFKDGDLYIAKTYGKDYQDRLSHWLRKNGYGTGKEWIPAINVDWNSYPVPIEHEIDWNDLEIIGKLF >gi|343386557|ref|AEM22047.1| Psp1, 1606961..1607944 [Brachyspira intermedia PWS/A] MIKNIAHIKFRGSNIGKFEHLHIENIKVKDACVIETDEGVEIGHVLNFEDIDVDLLEEENNINSDNIENNDEIHEDNETINEEEISEELKDIAAEEENNSVKVKNNKNKIFNILRIADEKDLEQYRINMEDAAEAFKICKEKVNNHNLDLKLISSYYFLDRAKLLFEFIAEERIDFRELVKDLAAHFKTRIELRQIGVRDEARSIGGCGICGRELCCKVIKGKFETITIKMAKEQGMLLNTMKISGQCGRLMCCLAHEYKAYCALKKDLPKVGTKLVFNNVPAVIKELNPLNKKLLIETEDKRLIYISVSDLKTNEEGFLIANIKAE >gi|343386558|ref|AEM22048.1| tryptophanyl-tRNA synthetase, 1608098..1609081 [Brachyspira intermedia PWS/A] MLSGIQPTGSLHIGNYLGALKNWADILNDYYGFFCIVDYHAITVEYDVSQMQKRIMDAAVEYLACGLDPNKCSIFVQSDVRAHTELAWIFNSIIPVAELERMTQYKDKSRKNVENINAALLTYPSLMAADILLYHPDIVPVGEDQEQHVELTRMIVRKFNNRYGEYFKEPDTYHGKVLRILGLDGQNKMSKSLNNHIALSLTAEETEKLIMQKAMTDTNRKLKTDPGNPDICNVYSYHKIFSSEDEQKEVCEGCKNASIGCVQCKRMLAKNINNELAPIRENINKYSNDKDYVYDVLKEGAKNASEVAEKTLYEVRNLMGLVDNKRK >gi|343386559|ref|AEM22049.1| aminodeoxychorismate lyase, complement(1609161..1610168) [Brachyspira intermedia PWS/A] MKKLFIILIILVAIVSASSVAFIQYMISPISKDSEKVYFEIKQGEGASTIANKLELQGLIRNSKVFLLFAKYLKYDRKLLSGYYEVSRNMNMIEIMKHLNSGKQAMVRLTIPEGKNIYEIGTYLESQGFTTKKEFLEVCHDKEILKKYNIPSDSVEGYIFPSTYYIVKGNPTKVLVMYMIDSLFKQFPDLEERAKKMGRNVHEILTMASIVEKEMGPLDDPKLISSAYYNRLKIDKRLEADPTTIYAMTLVKGDYIEKPNLKYADLRMEHPYNTYKNTGLPPGPICSSGAKAIEAALDPADTDYIFFVADGTGKHAFSVTYEEHVENINRYIFKK >gi|343386560|ref|AEM22050.1| Histidyl-tRNA synthetase, class IIa, complement(1610253..1611503) [Brachyspira intermedia PWS/A] MLDIKKPRGTNDFFYDSSKRLEYIENKIKNIVKLYGYGRIRTPLFEYTDLFTRGIGEGTDIVGKEMFTFEDRGGRSLTLRPEGTASVARAYVENSMQNEFAINKLFYLGTMYRAERPQKGRYREFNQFGVECIGNSSPLIDAEIILLNINVLKEFGIDDVNLLINTVGCSKCKPSYNNALKEAIGSRKEELCETCQKRYEGNILRILDCKNEKCKETIKDIPKFYDYVCDECKEHFDKLCEELTRIGQKFTVDPMLVRGLDYYTKTAFEVQTNALGAQSAILGGGRYDNLIGIFNNGKDVPAVGSAMGIERLLLVLENQNNIITDRLDAYIVAFKETENEVLKIMQALRANNISCDYDFAVKSIKSQFKSANKRNAKYAIVLGEDEFKRGMCKLKNMDSGEEKEISINDIHNNIEK >gi|343386561|ref|AEM22051.1| hypothetical protein, complement(1611530..1613605) [Brachyspira intermedia PWS/A] MKKVIAFILLLYFPLFSQNSITFPDYIEDLQTKSPKKSIDWFKKNSYSDQYGVNEYVFDFYRGVSRYLSFVKFGSARTEVNRAASDFRKALELPNDPVYSYNDRAFLYLGGILTILPGDKELPARIFKYYADNCKTSNPHYPTAIYWSMYLSYITPMVYESYYETLNILSKNPNNKIYDYFSGENKPISEMMKKLKSPQDMTQKVYEWTTSNMDVYTLIKNSIPILPEEEGLSVFTAQKFDTFERYSPSKDIDEIEKEIEENEASEEDLVKTEIAPEEKEELDELQDIAKKEKTPENASNRKIPSIEKEIVDEIVIDDPKTIEYKTNILRGTKEQKDVPEPTNIETEIEDKPLYPLTILIDKSPNNGPIGVDIEDYSFNTEVSTNFVIEVSEGMYEAYISFGDKLYTNAVKVEKDKYNLFSIIIKDHTSTATNDIDSLKEEIKEELIDVDGEEEKEEVVEEKKEDVSVTVGKENTPVNRYDGNAENTRNIIREVLSRPAKVATEWFNTNPYNEYMGISVEEYTYYRGVAYYSRFLNEGRRSAEFAAQAKSDLTFAYNKKDNSNLLMRTRLYLGAVNLFAYNDLYEADKMFAEVGSSLSEDHRYYPTVLYWRSKIGVADAAKLEEFSKILSSKPKNTQILDYSSTMFKDLSSMPSYEEKITGIRAVGNSKPIYEPPKNTSKAGSTKTQEVLN >gi|343386562|ref|AEM22052.1| hypothetical protein, 1614157..1637757 [Brachyspira intermedia PWS/A] MFAEEKAVLEGIVEEKISEVRDNAIDLEIAVKKAGFISKSMEEDLAKLNKRIESYKDYKAAVSQYQEQVDSLEEAYLEILNKVDTVLKERNTIEKTYKRISDVKAKMTELEKNVGSIQDKLIESYNSKLNEFESELYKRFDALTTNLLARDAHYSTMAEQEKEKISALTEEFKLHVAKKEELFTNQLTQLAERTARHNIEQLAELFEKGRDELINKYSSFADEIDVKSKDIENRYETLSQSKDGLETELNNLRDTIHDRLNSITESSVLEFKDEMEKTKEMLYSTLKEGLEKISQDKEEFLDSIEQKAHSLEKSIDDIKDKADYISKDYAEKAHQLENEFSVLKDDINNRFIAEVENFSNHIRNVLENEDDGVITLYRNKTKELNDLIISIDGMSEETMLKAESRFEDIVNDIDKLKDDILTRAQDDMEYSIDKARSSLIAEINELRNDVETETNLLKDKIDETHYQTSEIISILNNKQEEILDSLNLQKEYLYKDLEAQANDRVNEIEKLFSSVKSELEENIDSYIKNTSSDLTAIDEKLSSLKEQYDKASSDIDTLSKDTEYNIKENLEKRLEILEQSSVEINGLVSRANEKLDTGIKDTEEKIDDIKKEISQYSDAYIESLKSHLKNVLDDYEQTKMKAITDSIDSVINQVDESEKRHDELISNIENSIDEFKNKMDLAINENVKFNEESKKEVVDMLHNELRQATDAFDTLLNEKRDSMNKIKDEIEDIMHRVENGRDTFERTINKVYENAEDKEKALMSDIEDKYNSLDKKIDGVLDERRADLNAISAEYNAMLEKYSNNLKDDYEELKHHASLMSDEYKIRIENLGERINEIIDNANNMQSIIDSKASEIDSYIVYKKEEIDRKSSDIFAGVEENASKKLDELRELIDNSINKYQDEIKEIEAYRLEEKQNIIQDVENIGASIRKDYEQYTNLLEDFYNKEKDSLNDYANNLKDEIEKAREESETKHLANEANYIDEYLNKASSKIDEEVNRLNEELNSSFNTLYSGFSKILAKIRKANNKKLLQYISKIKRHANKVISNTAAEVRDSLGLTLEDLRNEFISLKDNVDDRLREEADKLISNNENVLAILDDHNNRLEQINDLSNTIENIKETLLEQINELNSHLSDTNENFNNIIDNIKSSIIDRDELIELQNSEKDFLKNQIEDIKEEFELFKDQMLRTNEVEIPALFDEEKERIENMFDEFSKNLLMRLTDNESDIHYIKDVLSEERSHLISQIEILRKDVDDIKDDNTVTVLSEEKAVLENSLTALRDDFDKIIDLENDFVTLKNRMEGIDSGLKDDVKDLSDKLRDLKNNLEERIEKDSNGLYRDLESLNNNFEDVRKNMSSFFNKDEIEEMLNKEKSRLDSIFESLTSNNESFKDRLEKRITYFEDMWSDNTKIKAIYASDIREEVENIRKEADIKYDNHIADLKQKMQLIEQDIYDWKNGNLNTLLSQLDEAKRGIEEFINTSEGKKNQFLIDMVNDIEKKENEIYSRIDEKVLEAENKLSSIDEKLNKAIGNSLEEIHNRINESVAKYDEEIKRIEHHRETEAENIISDMEDLGNSIREDYEEYSIMIDKIYEDAVSELEVHLDNIKKEIERSRAESEEKHVTNEKNYIDDYLLDYSEKIESRVNDKLNILTESKAQLDDMVKESFDALNTNLNDVISKFNEEANNQIHSVVSRLEEEASERLRNEQKYMSELEEQLRAISVKIDNELYNISTKLDNEISDVKAKYKDLSNDFDEALDTIKASIFDRDELIELQNSEKEMLAEQIDTLKTEFDSFKDELLKANEEDIPTLFEEEKQKIERAFEDFTSSILERMNNSENDMNYVKDVIIENRNVFLDKIDNIKRDIESIKEDNTIAQLALDKQSLEDSFNTIKADFSKLADLETALTQLKGNVEDIDLNFKDDIKILSERFEEFENKSVADERFDNLSFNIDEIRDNLKDSINKSSELENEFVSIRENILEALSKNENIETLFADEVKKLDDLFSNLKTDNAEFRNRLEKRIDYFEDTWSDSSRIRSLYAAELRDELENIKSEADIKLENYVNDLKSQIEAVNNDASAWRDEYINNLKEKIDSIDKDISSWKDGRINDLLEQLENAKESINNYLESSEGKKEEFLSDILAKIEDKENSIYNRIDAKIEDIENRLSMVDGKVSDDIARGLEEVENIVNKAINKYDEEIKNIEHHRAEENTKLLDDIQSGYDYYSKLINTTYKDSLSSLADYTNRIKADIEKARKEAENKHINNEKNYIDQYLKDYSAKLDDKVNEKINILNDSKNKLDDMIKESFNTLNVNLNDAISKFNQEADSKINSTIEKLEKDASERFFSYKTYLSELEDNLRAINAKIDNEIYNVSSKFDNDISDLKNKYKELTIDFEESLDMVKSSILDRDELIELQTSEKELLSERIDDLKNEFESFKDEVLTANKDDVPTLFDEEKERIEKAFEDLTNTLFDRINDSEKDINYIKDVISEDKISLLEKMDNLQSEIDSLKENDTITQLTLDKQVLEDSFNSIKNDFSRLEDLEKHLSELKDSMSNVDLDLKDEVKSLADKFNSFEDKIKENVDNLSDNIVDLNSDINVIRNAINDSIKKSSELENSILRDKEVLENRLFSIKENLMSMSSNNKVSDALFNDEVKKLENLFDNFKNDSIEFRDRLVKRIEYFEDTWSDNAKIRSLYAAEMRNELEEVKKETELKFENYLNDLVNRVETIDENISSWKDGKINELLSELELAKNNITSYLESTEDRKEELISDVLSKIEEKENAIYNKIDSKIADIEDKLLVLDGKVSNDTANKLEEVKEIVNNAITKYNEDIQNIEHYRVEEGNKLLDDIKSGYDYYSKLINSAYKDSLASLSEYTNRIKAEIEDARKETVYNNNIDKNYIDEYLKDYSDKLESQIADKINILNESKNQLDDMMRDSFATLNDNLNDAIAKINENADNKLNAVIRKLETEASDRLFDYKEYMKELEDHLASINNKIDNEIYNVSSKFDDEVSDIKKKYDALNIDFEETLDLIKSSILDRDELIELHNSEKELLAGRMDELKEEFDNFKDELLSERIDELKNEFKSFKDEVLAANKDDIPALFEEEKQRIENAFEEFTNNLLERVNISESDINYIKDVISEDKLTLLEQIDNLKADIDSLKEDDVFTQLSAEKEALEQSFNSIKNDFAKLEDLEKHLYELRDNMEDADVTLKDEVSSLSSRFDNLENAIKEDRENIEKELASGLNEVSSLSSRFDNLENVVKEDRENVEKELLSGFNNVNADIDDIKNDIINSINKSSELEDALLKNKEELEDKLSAIKNNLLSMTGRSETIETLFNEEVSKLEELFDKVHNGNIEFRDRLEKRITYFEDTWSDSTKIRSLYASEMRNELEEIKKETEIKFENYLNDLNKKIDNINDDISIWKENNINDLLAQLESAKEDISAYLDTTEDKKNKLVTEVLSKIEERENNIYSKLDEKIADIENRLSEANTKLNDDIAVNLDNLNNMINDAMAKYNEEIKNIENYRAIESDKLLEDSKKLIEDIKNGYEHYSNLINEAYNNSVNSLTDYSNSVKAEIEKSREESEAKHLNNEKNYIDEYLKNYSDQLDSKVSEKIDSFNTAKDSLDRLVRKSFHKLEANVQDAIHKFEKESNSKVVEVIKRLEKDAKTVIFDKNEYSVYLTEQLGIIYKKIEDEVSKINERIDGDVSNVKEKIDSDIASLSSTIYDDINTIVEKYESLSKDFDSSLEVLKDSIIERNELLEVSSADKDLLVSKLNDLKKEFESFKDDITKTTNDSIPALFDEEKLRIENAFEEFSAVLLDRVNNSESDINYIKDIIYEDKSYILDRIDNLKKELYSLRDDDTINKLTLEKNALEESFNSIKDSFSKLEDLENNLYQLRDDMADVDINLKDEVKNLVSKVDELDSKIREDVSRDLEDYSNDLGMLSNNLNTLNEYIESIKSNMQDSLNRASEIENNILRDKEELENKLSAIKDNLLSVSGKNDNIESLFNDELQKLESLFDKVRNDNIEFRERLEKRIEYFEDSWSDSSRIRGLFSSDIRDEIENVKSYTELKFENSLNELKEKMDSMNDDIAVWKDEHISDINSKMASINADLESFKDEYLNELQSRIDSMDSDILSWKDERINELLTQLEEAKNNIASYIDNSDVKAEKLLSDILSKIEEKESHIYNKLDEKIADIESRLSDTDSKLNNEISGNLNNLYNMLDEARVRYDEEIKNIESYRTDENNKVLEDYKKLIDEIKSNYDHYSNLINETYNNSLNSLTNYSNLVKEEIEKAREESESKHLNNEKNYIDNYLKEYSDKLNNEISEKVNMLTEAKEQLDNMVKESFDNLENSFNDAVVRFEEETSNKILEAIDKLEKETESVLFKKYMSALDDRIHSVNEKLDNETSNLKDKYEALSSDFDEAVDIIKNSIIDRDELISLHNDERNAIVERFENLKNDFESFKESSLKFDNEDVPALFENKKKEIEHIFEEFTSAVVERVDITDDEINKLKDAIVSDKLDLLEKMDNLEVELESVKKDNTVEQLALEKKALEDSFNAIKADFAKLENLETNLYQLKENMSDVDVLLKDEVKALSNRLADFEEKIKDDIVRDLDEYSIELNNLTDNVGKLNSRIDDVKSQIEDSINKSSELETLISNEKEELESKLSSIKDELVSRDENNDNIDKLFTQEKEKLNDLFNQIKEDNKEFRYRLEKRVAYFEDTWADSSKLKNIFSTDIREQLDNIRNDNEIKFENSINYLKNKVESIDSDISNWKENTVDELVKQLGEARESISNYLNDSEIKGKELVDNLLSRIDEKENSMYQTLDEKEKNMYQTLDDKEKSMYQTLDDRARNMYQSLEEKEKSMYEVLDNKVQDIESRLSIIDSKLNDDISSNVENLYNMLNEAVAKYDEEIKNIEHYRLDENNKILDDIDNVGKEIRSSYENYSKLIEEVYNNSLNSLKDYSNSIKDEIEKSREETEEKHLSSEREYIDEYLKGYTEKLESQVSDKINILNDAKNDLDNMLKSSFDDLEARFNESMAKFEEASDNRVFKTLQDIEKKADDVIYGNNYIYKIEDKVKDFYGKIDTKLLHFADRYETLEKKIYDLESNQNYIYRLEDKIRDLNEKLDDRITNVNERYDNLRKSFDDKFAYIESAVLNNEQVQKLRDDFIIFKDDVLKANRNDIPELFNKEREKFEELFNSFTNDIVSKLDNSNANIEEFKNTIYEEKNSILENMESFRYELDELKNNDSIEALEAEKARLEDAFNSFREEFERLYDLESEVYNLKSNLDGIDSNLRNDVDKLFDEVSEFKYALEEKIDILEDNTVSRDLFDDDREKLYSLYDELEAGNKDFKDLIDKRINYFEDTWSDPNKALKLYENALRPEVDDLKSEILSNVQNQVNEMESSLSAWKDGNLSILLEQLKEAKENIDNFIESSKDKKNGIIAKMISSIKEDILGKESEINTRLEEKLSSVNARIADFENKLTSDVSKFNDMISEAVDKYQDELKNIESYRLEENESIMRNLEDIGRNIISNYENYSRMLDSVYENNKNALDEYSNSLRIEIEKARVDTNKGYIDEYLSEYSSKVEADIKERLEELEKNKYNLDIMVNDSFNNLNQSINNAVSKMIEDSDSKLRDVIDNLEVQINDLIANKEEEIVSRISAYETELKNNNSSSLEDIKNELLGLYNEFKENVNYDNLKDISEKLNGIETSLSEVNTQLENKAKDISDRIDLEKEELYASVNKLSSEFEDFKSNIDERFKTQVSDFVSNNEHILSLFGEYSEKISSVTNILEDIENVKVSLIAEINKVKEEIDSKYSSLTKDFDKSIDEIKDAVLDKNNILQYYINEKELLWKEIDALKATFASLKDGILNSNEVVVQEAPSVIDSEKARIQSIIDDVFETLSAKISNNEDSISNLESSFSEYKSLISDAIDGFKDEISSIRNSNNYDDLIEERNRLEESFNSLKDDFSKIEDLEKDLHLVKDKLKGDDSSLIDEVMRLSDELEELKSSLSDMNNSNNVNSDNDIDAVYEDFKQLNESLESFKETVIPQLSSFSKLEDKISENREEIYKYINSIMYSLPEAYISREEISNLETKLYDIFNNFNDGIVSIKNDLVSNIEKDTKEFKDRIEKRIEFFEDAWSSEEKLVELYGNVIADNFDVLKQGLESQFNDSFAEFKDKIENMQNDLNNWKSSNLDAITDTLNNAKDIASDNADYSEIKSMIETLKEDIYNKQLELKNDFDSKLEEGISNIELQINTFDDRIKDLEYSQDTLASDLALYKEKLDSILDDYEDKVQSKVINLKNSLKAEEKDTLDYIENNISSIKNDINSSSKGVDLKIKALESYISKINNELNTNTLKLSNELAKDKKELLDTINGLKKEVYDRITEEVSNKDSELLNDFEEFKNKITEEISNKDSEILNDFEEFKNKIINAVPNMDELAELFVSEKEDIVNEFEELKNELLDNHLNNQNFAKMFEEEKAKLIDELDHFKSAVRVEYISAEERFEALKKDYMNNLNNLLDVEKADLESSFEEIRKEINNIKDSSVSKEEIEKLIDSYEQEIGSSIENKKVEVAENVESGKVDTSYVEKLIEEERARINETLESFRKNIEENYSTVEAVAEVLSKEQDEVEAKLLGMKEDILSEMPTLENVSQIFVDEKENLKEELRDEFASLRDEILGSVPTNNDLANMAQQYGAKIRDDFQILEQDFSESIKRYKENLSNEMLSFRNEFNDRIANIKDLAEALQAERDRLMAEIDDIKLKYESGTIYSGEALNTIEGDRDRLVNEFIDFRKSIVELIKEQDETMTMLNNEKINIIDSIEALKNQISFDTISRDDVAAMIEDERRQVAEMFESIQNDSIDTDLRYLTDSFRDDIIKVFEESNDEFRKRIEARIVHFEDAYASADRIKEFYKDAIIKEVDNLRGDAENILIDLNEKVENAKEQIDLLENNKVQGIINKIDEAENDINSLINTMKANIKEQENELRMLSQSQKHISQEVETVRREREALMDMVKNSDINIKNKLESLTSAVSEAAEMASAKIAEKEAAFSSKVKEAEEYINSLSDRMTVENNNALAKAREDVNNLVASFNESVIKETNDLAPHITNTVQNFINNEMKKFEKFSDVRSAIEGIENDINNKITDAFNNMNKELEDNIIEFRKKIDTYQEEFISELKMSVNMEGEKAVDEIKSLHDDEVAKLKEMYLTTEKFYTDRQEKNHEDFSKLFEEAYKEYNEKIESLYAQLDDTKLQISTSVEDVVADLKQALSIKDEFLTSVENNKEKLEAVEEQMNNLQNEFAPSVEKLKDIIEEKALELQEKINEYSQDIELQGDKFNSRLEELSNNAKSTIENKVTEFDSIIENISNRMDTLLEEKNSEFDALKAHYEGLSESLTALKDSISEAVNERIEEANSIIEENVQTIEESANEKYEKYIARLNSNLEQTLSLLMNDAKEHIQKAKDEIIKAHTDNLDEYDQRITNMKDIVSALEEDITKYSSEIDARLESINLSYDEKTNVILKDFENRTDELKLKLNDASESIDKMLDVKTNDISLEYEAMKSKIDNIAKDIEKYMNTVKVFDKAKEMAESIKTDVSKLNTLVEDTKATTIEMNKTMSEFDSLKKMHQEILGYAESLRKEKNSLKDTQEKVNMLMEMSGEIQERFVNIAENNAIIERTEEGIQVVIDIASQIENKLSFIKDKEEYADDILQQIRKAEVETDAIFERVESIKEAMVEVEDTRKNFMDKIYSLERDMAKIDKNDKKVQLFISKLEEIDDIIQAIQDQGENLVRMRNQYDDYDKSIAKNLERAEYFVRYLETLLDNAGKYISDKGSKSTSKKTTKIDSKKEELIIKMYKQGWKPEDIVKNTSYSRDEIEKTIKAWKDKQSRG >gi|343386563|ref|AEM22053.1| hypothetical protein, complement(1638069..1638812) [Brachyspira intermedia PWS/A] MKKIFIFNIIAIFLFISCNEELITIVDEYNSPYAVYAIPGDNKVSISFWSGVIASDFAGFNIYAGTSPNFTQPDNAIKNSSGAYPTITGSNHTRTNFVREIPNYTFNNGTLYYVAVTAYGTNDLVDNKYIETTINATYPVIPRPEGTGNDAPALSANGNNVGNIDAAGGKVTPSSGWKVQYFGYQTNFNAVVIVTNNTDDAFDSEAVYSVNGLYIFKSGNQLAKIWIKSATSYQWAYQANASQWWGI >gi|343386564|ref|AEM22054.1| hypothetical protein, complement(1638815..1639594) [Brachyspira intermedia PWS/A] MFFISCGLPDVTGVTLELNQPYITKVIPGQNKITVEFEAQNNEPSFSGYNIYFGDSTNPRKYRLYNQQKALPTLIETKSSTIKKYSFSIEVGSYFSTNSADIYTLKESDLNNGIPIYVWVSAYQITPQLESYYYYDNFVKMGTPRPEALNQTINVDSTINMEGRDLARLINDAGTLYFQNAANTSMMVMSGTSLNDIVVPPENGYGNINLSVKANRLYLIKIIDGNNAYYGKIYVRSVNGTSSITADYCRQTAANILSY >gi|343386565|ref|AEM22055.1| deoxyuridine 5'-triphosphate nucleotidohydrolase, complement(1639674..1640153) [Brachyspira intermedia PWS/A] MLSFLDNIIKYLEKIMLKIKIINKSDNPLPKYQTPGSSGLDLHANIDKPITLNKNDIVLIPTGLFIEIPEGYEAQIRSRSSLALKNGIFCLNSPATIDSDYRGELKIILASLTDVPFTINKGDRIAQMVFAKVEKASFEEVDTLSDTQRGEGGFGSTNK >gi|343386566|ref|AEM22056.1| gluconate transporter, complement(1640134..1641423) [Brachyspira intermedia PWS/A] MLLVAIFLAFTLHVPSNNDTNYITEISALIGKGFGNALASVGIIIVLGSVIGNILEMSGAALKLGEIVLRVVGKSHPALAMNILGFIVSIPVFCDSGYLILTPLRKAVAKKSGASPVALSVALSTGLYASHALIPPTPGPAAVVNLFGLEAHLLTIIIIGLIVAIPTSLVGAIYGIFISKYIKKPNYPDKSPTYETLISDIGGLPPTWKALAPIVVPILLMAIGSIVRFDSFRVGSGMIKNIFIFLGEPSMALFIGFLFSLLLTHKFNKEEISMWIGDGIRSSGSILAIVGASGAFAEVLKSTELAKIIPELGHIFGSLNMGLILPFIMASALKIMLGSSTIAVVTVASLFAPLLGTLGFNTPISQILVLMSIGAGSMIASHANDSYFWIVVELSGLKINDAYKARTLATFVQGITALIIIMILAFLFR >gi|343386567|ref|AEM22057.1| Phosphocarrier protein HPr, complement(1641570..1641881) [Brachyspira intermedia PWS/A] MTLTNVVTIKSKNGMHLRPAGVLSQISSKNEYSNIGIFLLYNGVRADAKSVFNIMGLGAFQGANLILEIEYEEGMEEVAKQAEKELVYFFEEGYIHAEVPEDD >gi|343386568|ref|AEM22058.1| exinuclease ABC subunit A, 1642436..1648252 [Brachyspira intermedia PWS/A] MANNSIEIRGAKEHNLKNVSLSIPHKTLTTLTGVSGSGKSSLAFDTIFKEGQRRYLESLSAYARQFLGVMAKADVEHIEGLSPTISIDQKSVNKNPRSTVGTVTEIYDFFRLLFARLGIPYCSKCGHKISKQSEDQIAQSVLREFAEKRILVLAPIVRDRKGEYRKEIEEVKLAGYPRIRIDNIVYKFDEDEIPELKRYEKHTLEIVIDRIKVEDKYLSRITDDIERAIRITKGLVAFYEEHEKSEEVLETDTPENAEEDTKTKKKKIKMSKQFEIDKYYKLYTTERSCANCGHSIADIEPNLFSFNNPMGACTVCGGLGVEHVFTEKHIVKDENLNIYEGALSCFVDDHIGFDMEYGTDELEVIAKTYKIDLKKPWKDLTKTEKKYLLYGTDKEVKWRKRFWYHSKLVEERVPGILDRLKYDYETYKNSYYANFMDEVQCPKCKGKRINEDALSVKFNGKTIADFSSMTIEDLYDYFTKLKLKPNEEVIGSPIVKEIIYRLTFLVKVGLTYLTIERSSPTLSGGESQRIRLASQIGSGLEGVLYVLDEPSIGLHQSDNKKLIESLKTLRDKNNTVIVVEHDKETMEESDYLIDIGPNAGVNGGEVVGIGDYEEFIKSDRSYTAKYLRGDDDIEIPKQRREGNGKFLKVIGANQFNLKNIDVQFPLGLFIVVTGLSGSGKSTLVENILMRALHNHFYGKTLTPGSHERIEGLENIDKVIEVDQSPIGRTPRSNPATYTKVLSPIRDLFAATKLAKMRGYDKGRFSFNVKTGRCPTCEGAGVIELEMQFLSNVLVPCEECGGKRFNAETLDVKYKDKTIYDVLEMSVSEAITFFDGITSITRILKIMEDIGLGYIKLGQPSTTLSGGEAQRIKLASELHKISTGNTLYILDEPTTGLHFEDIKKLLKALDGLVEKGNTVLVVEHNLDVIKCADHIIDMGPLSGDKGGRVVAEGKPEDIINVKESLTAKELKEILKPSKKKKENIITEETKKEENTSLIIKGANKHNLKNISLTLPKNQINVITGVSGSGKTSLAFDTIFKEGQRRFVESLSTYARRFLGRFEDANVEKIEGLAPAIAIDQKNVSRNPRSTVATVTEIYDYFRLIFARVSKPHCPHCNDKNTLKAETPSILATEIVDTMDLHKLVIISPLYHSSFNHRFTFDDNDAKDIKKIIEKTREAGYVRMQINNNDYVIDDITEEDIKELSKEEIYSVGIVIDRIVVGKDKRARIADAIDRAMDLSNGVAHIKASHGIIVKESFHTKFPACLLHGILFDFEVTPRHFSFNSHWGYCEECKGLGSKPTFSIDLAIKDSTKPLFDGALDTAIHNMFSTPGKHYTDSLMRFLRRSGITKKDLYETPFNELDKKVIDAFFFGGDYSVGNVITAWHSNNDVTSEDYSEWKDQSLGKFFIDEECSSCHGERLNEIIRSYTIQNKNISQVCAMTVEENIHFFDELPNLLTERENTISKEAIKEIRTRLSFLDKVGLGYLFLSRKYATLSGGEAQRIRLASQLGSKLTGVLYVLDEPTVGLHPRDTNHLLDTLKELRNLKNTLVIVEHDRDTMKAADNIVDMGPYAGAFGGEVVFQGKYDDILKDDNSLTGNYLSERKKVFEKTAVRNEETECIKLKNVSTNNLKNIDVDIPLKKIVVVTGVSGSGKSSLIIDTLYPALKKRRLNQYSKFESVEIPSIVSDTILVDQISIVGSIRSTLVSYSKVFDKIRNIFAKTPTAKAKAFAPGRFSYNGKEGRCNICEGKGIRKIAMHFLSDMEIVCEACGGKRYNDETLSVRFKSLNIAEVLELTVDEAIEFFDFDKSIVKTLSIMSEVGLGYIKLSQRLDTFSGGELQRLKLATELAKKQGDEHIVYILDEPTTGLHFDDVNKLLIALNKLVEKGHSVIIIEHNPDVIKAADYIIDLGLEGGTNGGEIIAKGTVDQILEMKKGYTWKYI >gi|343386569|ref|AEM22059.1| hypothetical protein, complement(1648332..1648862) [Brachyspira intermedia PWS/A] MKKTKNNDAAGAFRLLKLSFFIESLCRYIKGKDPDTIEAEFKQRCKKDGKWYSYDPNIWNGHPTDEEFEAYVEKLKSEGVEGEEDECTYWTEEDLAIYHEAEKLLYAISKTRENRRIIREGNIEENIFEYDEDTNELLKLLSDNNHHEALKKAKEIIQEDENPDEIMSIYHLTNNI >gi|343386570|ref|AEM22060.1| hypothetical protein, 1649148..1649486 [Brachyspira intermedia PWS/A] MSDTKNKKEYKYTHLSTTVRITESELDLINKVVASDFVNKNQFVAFLLRDYLKKYTDENKQDDVNTLNTEDKSDNQNNSNISIADLNNSINILNQTISNLADLIKKDNTNND >gi|343386571|ref|AEM22061.1| putative dynein heavy chain, complement(1649626..1650765) [Brachyspira intermedia PWS/A] MKAIFLTVLCTLFIFVSCGNSNNTKQKTTSDNTTTEITPLQLSENEKANNYEVVYLVADTGEYINSEIAQNEKGNFGVIYYRDINQNLNTFNVTRAGELDEGNISATSYDNKTLEGNFPSTAYPFVAKIDGKEMTFKAAKTPVTGARIIEYTYSNVSPESSTNGQRFFQFKTAIFALKNDSKSASIDKVNLDINKDFGITDANTFNDLGKLLTAQSLISNKMTPIYDEWVKSDYISHIENYSSQFGIDYLSEKVVSINKMVYEYTGGAHGNYATINSVYSLETGNQLKIADLITDLKNADLIKLIVDKLVKIEGRDANSYFGLDELSLENNNFYLTSKGLVFTWGIYEIGPYAIGETRVLIPTEEIKPYLKDEYKTIFE >gi|343386572|ref|AEM22062.1| glucose-1-phosphate cytidylyltransferase, 1652138..1652734 [Brachyspira intermedia PWS/A] MKTVILAGGLGTRLGEETTIRPKPLVEIGGRPIIWHIMKYYSHFGINDFVILLGYKGYMVKEFFDNYRRHLYDMKIDFKNNSSSSFKKDNNNSFEEENWVIELIDTGENTMTGGRLKRAYPYLKDESSFCFTYGDGVSNININEEIEFHNKHKKTATIGAVYPPARFGALKIENDNSVSSFIEKPRGDNAYISGGFLY >gi|343386573|ref|AEM22063.1| CDP-glucose 4,6-dehydratase, 1652913..1653977 [Brachyspira intermedia PWS/A] METLEIKEILKIFKNKNILITGHTGFKGSWLSKLLLEIGANVSGISLKANDLSLYNLLNLDNQLKSYIIDIRDLDNIKNTVTYINPDIIFHLAAQPLVIDSYNNPVYTFETNVIGTINLMEAMRELNNLECAIMITTDKVYDNKEWVWGYRENDSLGGHDPYSASKACSEIAIKSYRKSFFNNISIVSARAGNVIGGGDFADNRIIPDIVRSIEKDIPVELRNPNSVRPWQHVLDVLYGYLLLAYNIINKNSVSDSYNFAPIDEGNKFTVEYITKCFINNIGKGSYKINIQDTNKKEMNMLRLDSSLARKELGWNEKFNTEEAIKQTSIWYKEYLNNNDLNAITSKQIKEYIEG >gi|343386574|ref|AEM22064.1| DegT/DnrJ/EryC1/StrS aminotransferase, 1653984..1655291 [Brachyspira intermedia PWS/A] MDRNKILDLVKEYARKEYAKKEFIKGVSSVPVSGRVFDEDDIAALVDSALDFHLTTYRYNDEFEKGLKEFFGLKYCLTCNSGSSANLIAISSLTSHLLKERALKSGDEVITVAAGFPTTVNPILQNHLVPVFVDVELETYNVNVEELEKARSEKTKAVILAHTLGNPFNIQRVKEFCEKYNLWFIEDCCDALGSTYNNQKVGTFGDIATLSFYPAHHITMGEGGAVLTNNPILKKAMESIRDWGRDCWCAPGCDDTCKQRFSQKLGDLPEGYDHKYTYSHLGYNLKITDMQAACGVAQLRKINKFIDKRKDNFKKISNKLEKFSKYLILPKAQENSDPSWFGFLISVKPDAPFSRNDLVKYLNENKIGTRLLFAGNIVKQPYMIGRNYKIVGSLINSDFIMNNTFWIGVYPGIDDSMIDYVDVIIGEFISNLGGK >gi|343386575|ref|AEM22065.1| pyruvate carboxyltransferase, 1655291..1656115 [Brachyspira intermedia PWS/A] MIGNITVFDCTFREAGYQTGWFFDEDFCRDYYKFAQSAGIDYLELGFFHNKEADPNRGHFRYCSLDNEEIKNIFSITKNTVKLSAMRDIQRPLTDLLPKKETVIDTVRILTRSSETDFSILEKHVKEIKNLGYEVFINFTSSGHNTIEKNREFAKFAKQHEIPVIYFADTESIFTPEYVRNTLEACREEGVEAGMHLHDKNGTAEMLLEVALHYGCKYTDITMMGLGGKWHDGNLSTEHFLRKYNYNPGYEQTRLKTMLIQNLIKYNKSTAAVL >gi|343386576|ref|AEM22066.1| thiamine pyrophosphate protein TPP binding domain protein, 1656124..1657908 [Brachyspira intermedia PWS/A] MKLSDFIFKFLNEEYNIKDVFMVSGGGAMHLNDSVGNNKNINVICCHHEQACAIAADGYSRINGNLAVVNVTTGPGGTNTLTGVIGEYLDSVPVLYISGQVKFETTIESCRELNLRQLGDQEINIIDIVKPVTKYASMVKDPLKIKYEIQKAIHIAKSGRKGPVWLDIPLDVQASDIDENNLEEYKIETINTPIVKEEIKKVIDILQNAKSPVIIAGHGIRLSNSINEFYELIDKLDIPVLSTFNGFDIIPTDNKNYVGRIGTIGNRYGNIILQNADVVLSLASRNNIRQISYNYENFAKNAKHIIGVDIDNAELNKPTINYTLKINNDVNLFINTLNNSLENIDIKQHTKWREWAFNIKNKYSKLLNEYTISNDVNPYYFTYELTNKLSNDAIVTCTNATPSLALFQVGSVKTNNRMFCNSGCAAMGFGLPASIGAAVASKYKNVICLEGDGSLMMNIQELQTISHYNLNIKLFLYNNNEYASIRQTQDNFFKRRTGCDFNSGVSFPSWEFIAKAFNLKYFCIDKKENIDNALCEILNINGPVFCNVILEKDYLFLPKISSEKLPNGKMVSRSLEDMTPLLSKEELDENIYKG >gi|343386577|ref|AEM22067.1| hypothetical protein, 1657912..1658991 [Brachyspira intermedia PWS/A] MKLKGNIAIYGAGGIGKELYSVVSKIGNKIVCFIDKNKSGNKIENINIVSLDEARKYNIDTVIIGIFSYPKECNIYDIVSLLNKYDFDNIITFEEMFQNYYEYFSKSNYYWLAPPMFFEKDMERINKAREVFCDEKSKIIFDSQMKHRLGESYKILEKPDYNNIQYFPEDIPLQKDNINFIDLGAYIGDTLINILDNGIKLNKVLAFEPDIKNYKELSINMKKLQKKYNIEEIFLLPVGVSDTIELASFNYAPSDGSFFSDNGEVNVPIISIDDIIYGFNPNYIKMDIEGLEFKALNGLKNTIIKDKPNLAISLYHLPADLYDIPLWFNENFENYSLYLRVHFSHCFETVLYAISEDKK >gi|343386578|ref|AEM22068.1| NAD-dependent epimerase/dehydratase, 1659042..1660067 [Brachyspira intermedia PWS/A] MINNIIILEDIKFIFNQLKILTNLSKLDNSNILITGGTGLFGKSILNFLLYARKYYNFDITILTRDKYNFLFNNLQYNKDFIHFINGDIRNFNCDKEYDYIIHAATPASDKLEKENPLEMYSIILDGTKNIINIANKMNVKKLLFTSSGAIYGEQYESIKSFKENYYGNPITYYGKAKKISEELFLTSNINVSIARCFAFVGPYLNLNIHFAIGNFIRDVIQNKNIIIKGDGRPLRSYLYTADLVIWLFTILLNSENRSVYNVGSSYEISIYDLAKKVSNLGINYTGNIEILTKPNYNYPTPKYIPDNSKIIEELKVKENYTLDESINRTMEWNLSIGATK >gi|343386579|ref|AEM22069.1| glycosyl transferase family 2, 1660064..1661092 [Brachyspira intermedia PWS/A] MNISPLVSVLIPTYNRKDLLKRALDSVLKQTYKNIEIYITDNASTDGTKEFILEYLNNDNRIIYSRREKNIGPLYNGSEAYTHLKGKYAIVLCDDDYFVSNTFFENAVKAMEENENVVIVRGIVKCFNEKNNNIFIDTYNSTKYIKGIDYLLNYANHEGYDNITSFFAMFRKSTADKTGIFKKFLPSADTWLWLYLFLYGDVYFLSDEIIGCYVEHNLGQDKYNIDTISNVDYMYELINDLKNKAKELHPNHINEIDVKIEKIFSNVLIWHTAQLCKIIGKRKAFSIMKKKDIISKYPRIKSQIFGSLSFTIPFKLVLLGIEVYEKIIKIYFLGISINIKRK >gi|343386580|ref|AEM22070.1| hypothetical protein, 1661098..1662471 [Brachyspira intermedia PWS/A] MNNSNMPLVSIVIATYNREKMLKEAIDSALNQDYKNLEIIVANNASTDGTDELIKKYTEKYKNIIYIKREKNIGAHANGYRAYKEVSKGKYIFFLCDDDYLISPTFITNAVDVMENNKNVVLVTGYVLMYFEDINKYLTIPYNDDKLISGIDYLINQSTVTMPNKYPEIIALFFLTSRECIENNELFSTFKESGDLAMRFYAPSLGDIYFLHEFVGCYRLHKAVRETSNIDSLYNDYCRAIEFSDNIVKRYTSLYPKYEDFWKNYIPLKIADSFIRDRIFKTFGLSHYTKEKVKKLKEFFKKYNIKNIHYKIYKYLYVVLVPSKARFTLSPFIFEYVRRSYIYCAILRIGFYKMDSALFGFIKDKNWLRIWILFFNLKIKLKNKYHSEIPKLYAYASNDILKNGKIEVYYTLDKSKEDQISSYDNIMEFIPNSNISKGEPITKTNTTKIKKIKNETY >gi|343386581|ref|AEM22071.1| hypothetical protein, 1662489..1663724 [Brachyspira intermedia PWS/A] MNNNIKISVIVPSFNSERYISRCLKSLINQTYKNLEIIVIDDCSTDNSCKIIEEFQKKYNNIILLKNEENKKTFETRRIGMETAIGDYIGFCDADDFHESYAFEYLLNLIQQDNYDMATGIFVYNENNWPCPKNSMVYILNNYDLYKNLFSKSEIHSLSISIFKKETIKKSLLEVPKNIKISNGEDFLWFAFIYYNVKSYIHGDKPIYNYCKNELSVSRSKNIYSALSRVVDYSILYYQLEQLLINRNQYETYRMRLSNIGMGMSKAAMERLKNNTDDYIELWEKHSSETMKKLLVNNILINKQQENIDFKIFNDRISKIELEINNINNNMVKIEKNLIKYSNNFTNILKNIINIIVWWIPIRKWRDDFRNKMLNPDQTRPDQTRPDQTRDRNYVYLNNIIIMDKLQAVFY >gi|343386582|ref|AEM22072.1| hypothetical protein, 1663740..1664075 [Brachyspira intermedia PWS/A] MNKIFNPFFINANLVINNDDIRNIEAFRKAVYHNIGNSYITYAFMKLVCGGVYDAKRINDIYDYDYNNESDIDYINNECTHVIFILQDHIRAYALEFPIYLLDFLKKSTNQ >gi|343386583|ref|AEM22073.1| Radical SAM domain protein, 1664438..1665181 [Brachyspira intermedia PWS/A] MSYSFHYDIDYMALSNKKYVSFSSMEDWENYLNNFTMYLGWRMHGAIVALNSGIPSIVINPDSRAAEMCELFKIPYMPHILKRPLIDAKWLYDYIDLGPMNIEYNKLYDNFINWLKKFGIEKQENNFDYIKQPSIKFQDDITIKENIIHMLNYKCNILKSNINTLNDKLNNNSQILKYKDNINKLAWWIPVKKWRDDFRNKMLNTDQTRPDQTRPDLICREYIYTNNNNIIIINNKLQPMLQDKIAA >gi|343386584|ref|AEM22074.1| Radical SAM domain protein, 1665363..1666463 [Brachyspira intermedia PWS/A] MLINVDEIKSNNLTYDLIVQRRKDLFYSINDENDHSSDNCKYCSNLVDKKFSDVNFDFLGGAHLPAGFNIQHYTACNQRCKYCTFTKQNFFVKPQYNILDYFKIFAEKGKIRGGNWVDFSGGEPSMLDNFDEIINYLLSINFGTIVVYSNCVKYSESIFRGLRENKIILTTSVDTGIPSLYKKLRGVDTFSRVISNLIKYRNSGTKGLWLKYIICEENRNEDSLWSFLLAMMALRPNNIMICPDFPYGDIEIPMETVEFAGELWALVESLLGITPIDYTSSFGAPKMVEYHKNLEVSIKKHREIVKKLNYNNINDNSSVINSDEYLKNEISEYKLKLDRYKDNINKLAWWIPIKKWRDNFRSKMLK >gi|343386585|ref|AEM22075.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein, 1666877..1669144 [Brachyspira intermedia PWS/A] MIETKEGFHYPLIDDEKCTDCGVCVKRCHSLNDNFKTKHRKEFYEVKASDEIRMKSSSGGMFSLVANYILDRGGYVCGASFSEDWLRVEHIIIDNKKDLDKLRYSKYIESDLGDVFIEVKKLLNDKKEVLFTGAPCQVSALNHYLGRDYDNLLTIDLLCNSVVPQKIWEKYIKEKVENIADIEYVSFRDKNIFKWTTGLYIKTNNKEYLSFGINDLYYKMFVNHTSCKEECLHCKYRRFDRPGDITIGDYWSVKAKYKDDKGISLIKISSNKASKIFNKIKSNCEYKEVNITHDGFEPWITPIWTNRKYFFDNLDKESIEELYKHCSDTKYNVGIVNMINTNNTGGVLTYYALYKLIEQLGYNPILIFNYQATRNLYDNTLGCKAILRYLNVGNSVYNESELYKYNKYCDTFIVGSDVVFALPSWVNLYHHLMNFVPSYKKKISFSSSFSCLPQDYNIGIKRKSLMKYYFEQFDKISVREDDGVEICKNIFNVKADHVLDPVFLLDNYDELLNNKTSTIEGNYLFVYYRNLDNTMQDLINYIEEKLDINVIKLPVTGDWKPTPLYELEDWLYIIKNCKYLITDSYHGFCFGLYFNKNILIKIDSGSSRLLSLMRMFNLEDRIVSSVEDIKNRDLLKDMDYTEINKKLEAEKKRSIEWLKEALESPKVLKEDSYKDDLINILIKDSMNMGASISNLQNNNIDISKSKVIIDLNNKINKLINTIAWWIPIKKWRDDFRNKMLNTDQTRPDQTRPDQT >gi|343386586|ref|AEM22076.1| coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein, 1669361..1671586 [Brachyspira intermedia PWS/A] MIETKEGFHYPLIDDEKCTDCGVCVKRCHSLNDNFKTKHRKEFYEVKASDEIRMKSSSGGMFSLVANYILDRGGYVCGASFSEDWLRVEHIIIDNKKDLDKLRYSKYIESDLGDVFIELKKLLNDKKEVLFTGAPCQVSALNHYLGRDYDNLLTMDFLCNSVVSQKIWEKYIREKVGNVEDIEYVSFRDKNIFKWSSGLYIKTRNKEYLSFGINDLYYKMFVNHTSCKEECLHCKYRRFDRPGDITIGDYWSVKAKYKDDKGISLIKISSDKASKIFNEIKSNCEYKAVNILHDGFGPWITPIFTSRKYFFDNLDKESIEELYKHCSDTKYNVGIVNMMFTNNAGGVLTYYALYKLIEQLGYNPVLIYSKLAANNLYDNTLGCQIALRYCNVGNSVYSESELYKYNTYCDTFIIGSDVVFALPSWVNLYHHLMNFVPSYKKKISFSSSFSCLPQDYNIGIKRKSLMKYYFEQFDKISVREDDGVEICKNIFDVKADHVLDPVFLLDNYDELLNNSKVKIDYDYIVVYYSTFDEKISNITNYISKELNLKVEIIPAINGYRDNPEYTIEDWIYKIRNCKYLITNTFHGFCFGLYFNRNIIISIYSGSSRLLSLMRMFNLEDRIVSSVEDIKNRDLLKDMDYTEINKKLEAEKKRSIEWLKEALESPKVLKEDSYKDDLINILIKDSMNMGASISNLQNNNIDISKSKVIIDLNNKINKLINTIAWWIPIKKWRDDFRNKMLN >gi|343386587|ref|AEM22077.1| hypothetical protein, 1671657..1672232 [Brachyspira intermedia PWS/A] MNKRLNNIDFLKIIFNFGIIYGHILQHYLIPQFKEYKTLFNYTSYSYGYMCEFLFIISGYFLFKELNKNDTRTFIIKKIQRLWPIFAFSIFITYILSRFSLSSWTDINVIPELLFLNRAIIYDIPVVVGIAWYVGALFWSSIFYFIISKIFEKKAIYIIYLITFFSYMILFSKVYLYSEPRVFNSFITFLC >gi|343386588|ref|AEM22078.1| hypothetical protein, 1672226..1672741 [Brachyspira intermedia PWS/A] MLRGFAGVGLGILFAYNVRINNDTNINLKSFIIGILEIIIFILIILYLSIIKIKFSFPIGFSLFTILFYLFLKGDGIFSIILNKDKIIIPFISKYIYGIYIMQFIVFGICNKFLYKNEYLGVVKFPILNIIITILLCFIVGILSNIIVDKIVYYVCIRPDQTRPDQTRLNM >gi|343386589|ref|AEM22079.1| glycosyltransferase, 1673038..1673646 [Brachyspira intermedia PWS/A] MYENIKKDIDNVVWWIPFKKLRNSLKNYLLQISDLSSKISNLDNKLNNLDNKLNNLDNRIPNIVENDLNYIKEKIGYADIRTYNIDIRTINMEKQINSINKDIRIKLNHIASEEYNYDKNIFNSITPPYISIIVPIYNIGKEYLLNCLNSLVNQTLKEIEIILVNDCSPNEEDDLICQEYALKDKRIKYIKHKKIKVLAELE >gi|343386590|ref|AEM22080.1| hypothetical protein, 1673643..1674398 [Brachyspira intermedia PWS/A] MTALREAKGYAIGFADPDDAVALNTYEIAVSRMLINNVDIVCFNYYWIENDEITDMHINIPQFLYGNNILHLLSIEKMHAPLWDKIYRKELIDRFEFDLFIDNNKLDDMIAIVKILSVANNFEYIPIPLYFHNRRYISITNDIDKKYIFDDRKYSVENIFDYFTSNFQLKEKKIEMNNFIITLYRLTYVFIDMKFYRTKQTDEDIEIRNCQIQLLKDLIKDNIRDGYITEEIFMDICNKRNLLPLIDLYIN >gi|343386591|ref|AEM22081.1| 5-methyltetrahydrofolate--homocysteine methyltransferase, 1674769..1677393 [Brachyspira intermedia PWS/A] MSNTKEKLKELIKEKYLIIDGATGTELQKKEIKKEFWIIDGNNIEGCNEILNITAPNIMKEIHIDYLNANANIIKTNSFGAIPWVLSEYDIADKAYELAKSAALIANDAREEYLKNPNSKGDLNRDVFIAGSLGPGVKLPSLGQISFDEMYNGYIEAAKGLIDGGVDIILLETAQDVLQLKAAILAVNDTAKKLNKEIPIMVSVTIEKEGTMLLGTDIETAYTILSNLDIFSIGMNCGTGPDMAMRHIKKLSEISCLPISIHSNAGLPENRGGKAYYSMTPEEFADINSKFFELDGLAFIGGCCGTTPLHIKALADKVKGMKPKNPALEKQRPYIASLFNVVSIKQNPAPLMIGERSNATGSKIFRELMIAGDMDGMLDVGIKQVKAGSHAIDVNAAWAGRDEVEDITKIISAYVKQISLPLVIDAIKPNVIEAALKVYGGKPIINSANMEQGEEKFDAICSLAKRYGASIMLLTIDEKSMAFTCEDKLKMAERMYDRAVNVHKILPHDIIFDPLTFTLASGDEKSFLAGVETLNAIKELSKKYPECSISLGVSNISFGLKEEARKIMNSVFLYEAINHGLTTAIVNVAQILPLSKIDEKEIELARELIYNKSNTKEPLINYINHFSDKKEKKELAGNEENIKKPIREAIRDAMLDGEWKDMQNLLNEVKENSEEFGGEKKFAQAIIDEILLPTMADIGVKFGEGTIQLPFVLGSAEVMKKSVDFLSEFLEKKKQEKTAKIILGTVAGDVHDVGKNLVEIIIKNNGFETVNIGTKVPIEKFLEAYHEHNADCIGMSGLLVKSTEVMKDNLAYIREKGLRIPIILGGAALTKEFVENDCKKVYGDTAKIFYCKDGFDDILAIKEIIADRDKENNN >gi|343386592|ref|AEM22082.1| 5-methyltetrahydrofolate--homocysteine methyltransferase, 1677414..1678226 [Brachyspira intermedia PWS/A] MPEINHKNHEHYINKPPFYGRKVFEFNKEIEKEAFDMINKVRLFRAGFGYSAKNQDMEKYNEMIKTKVEPKYEEMKSNIIENNLIEPVMIYGFYKTFTENDKLYIYNVDFNTNELKDEKIEIPLERMENEPYNSIVDFFDKEEDTIGFTFVSLGEKFHKFLKGLYDNDEYKEYYFYNALGTNIIENYVDILQSHMDNLLNLKNNGKRKHVGCRYSFGYKALTNMYGNRIIFNQLKPEEFNVTLTESYMMDPEISTCAIISFCEDSYYFAN >gi|343386593|ref|AEM22083.1| methylenetetrahydrofolate reductase, complement(1678228..1679163) [Brachyspira intermedia PWS/A] MNNNSSNVENFITKLENRDEYTFTLEISPQAKYDLGYIEEKINNSNISNYIDGFVVTDSPFANLKISSILAALQLHQRLNNNKPFIATQTMRDKNSIALQNDLIGANYFDIRMILAVTGDPINGGNQKQAKSVFEGNSELLIAIIKDLNKGKSLGEFTFKEPLKHIYPFCVINSYAKNNDNLKVRLAKKANSGVKAIFTQPIYEAERLELLLKWIDELPLKNKPVLVPGFFPILTYKTAYFIYYKLPGAYIPETWLHKLKKASDKSPEEEKKVAVELSSDLFHSMLKKHKKMHIMSMNNYDFVVDLLKTIK >gi|343386594|ref|AEM22084.1| NorM, Na+-driven multidrug efflux pump, 1679290..1680681 [Brachyspira intermedia PWS/A] MNVSEDATLKETERQIRKYKELTESKIEFLVIKMGIPTIISMLTTSFYNMADTFFVSKINTQSTAAVGIVFSMMAIIQAIGFFFGHGSGNYISIKLGAKETEEASKMAATGFLSAMIVGFIILILGITFIKPLAHVLGSTETILPYSISYMKYILIGAPYMTASLVLNNQLRLQGNALFAMIGLITGAILNIILDPILIFHFSMGVKGAAIGTIISQFVGFCILLIGTNVWGTLPIKLKDFSPSIQKYKAIIVGGLPSLCRQSISSFSTAFLNTASAPFGDAAIAAMSIVNRVAMFANSAIIGFGQGFQPVCGFNYGAKKYDRVIKAFFFCVKVSTFILIMLSIFIFINSSQIVHLFNDKDEALLSVAYNALHYQALSLPLWGFITLSSMMLQTTRKTIRASILAVAKQGIFFIPIIYILPKIFGITGIEIAQPFSDFLTFLLSIPLGYSMIKEMKSELRKTI >gi|343386595|ref|AEM22085.1| hypothetical protein, 1680742..1681284 [Brachyspira intermedia PWS/A] MEIKDSTRSALVRKGNELFNQKDIEGAYRCYLTASYYGGIEKVADYYNFEKKNIIKAMQLYKFIMKEDSNLGGNVRAKQKLDKLAESVVKVLRKWLKEDETFNKDNENDKLELNSKNAILPNNYKKNSLEDILKAKEKIDSKNNDLQVNDKTVNSDFYSKNINIKKPVFEQIYTNKQNKK >gi|343386596|ref|AEM22086.1| N-acetylglucosamine-1-phosphate uridyltransferase, 1681306..1682841 [Brachyspira intermedia PWS/A] MEKNVVEIENALASLSSKFSKNDTLVIILAAGHGKRIRSSTSKMLHTIWGVPSIERVRLAVKNGMPKSNITIVVGIKALDVANAVGKQANTNFAYQEEQRGTGHAVKVGLDKSDLKNIKYCYVIYADMGLIDSETMKEFHEEFLKSKTDMIVMTAMYDGPKGSNYYGRILRSRGLTCDGKKSKYRQGSQGNVIGVIEYKDILAMPDDKKLFKVYKDEKFSYEKDELLDNFNEYVAGIYGFKMKPLEELIQKLESNNAQNELYLTDLIEIFINNNLSISTYMPKDSRVVLGFNDKTVLKEMESIARSNVYNKLKNIITIYDGEDFFIDDSVVEQILEIDKDEKPLDIYIGKGAYIGKGVKVNYGVTISHGAKIEGNVYLGEHAYIGDNVLLSCLENQKLILDDNVKIYSGNQIKGNVYIGKNTTLERGVNVTGSDNHPVNIGSNVLIKGVSYLYGSIVDDNAYIEHCIFYYSHIKALLDDKGNVIKCRFIRPKEEGVEAVSKIEDAKKSKKK >gi|343386597|ref|AEM22087.1| hypothetical protein, 1682816..1683946 [Brachyspira intermedia PWS/A] MLKNLKRNSVLIFVTIIILFASLNAQYQKEIKKDAPPLTEHYVRMSGFESLYTWSIASLREEPYISELFIDGYNNVHFAYYDNLLNTAVYVTGKDGNFTRTILDNNRDLGNFVSIALNNRNVHVSYNKANKILYVNNNSGTFNNYTMDIRQNRKIVDLKLVMSAFNYPTLFFVDNRGILSVSRFYRDNFFSDFIYTNRIVDSVYPVAEKDGYALYMHEYQTGNILYGSRKTNTAFKFFDDRAIVTNSSIYSVSYEEHNRFNIVYLTKDNPQTINYTRFYDGVFTNGAIITEDENIISLDSALDYAAQIMVLYTKENGNKYLFMDNRIIDLSVLGTSIGNVRLKSAQYPYFYILYYNNIFNELRITKINISDIEKLK >gi|343386598|ref|AEM22088.1| hypothetical protein, 1684014..1684895 [Brachyspira intermedia PWS/A] MSDDQPKISFIEKNPRTCPVCKNEFYHEMLLTGGGRLIAGKLRDDLRRTYEKSKKYGTVYPLIYVVVVCPHCLYAAFQEDFNLIDHKKIDEAADGAKLRASYMKEFFGNDVDFTRHRTLIEGAASYFLALDGYRYIGKDSAPTLKKALCSLRLSWTLEDLANVYPNENYDRLIPFFQYKASELYSASIECMQNGKENFEKLKSFGPDIDNNFGYEGMLYMGALLGMDASKFIPDPKVKAETLVQAKRKISKIFGSGKSSKSKPSALLEKIKELHVAITEELNQLNEEYGIDVS >gi|343386599|ref|AEM22089.1| Permease, 1684895..1685965 [Brachyspira intermedia PWS/A] MKKLNAYLLKEFLSFFFGSLLLFVVLVTIAELSGRLSYYIQRPEVLKYIIIYHSFRIPHNIYYIFPVALMFSSTYVLGTFVKNKEMLAIENSGISLFRFSMPMFIIVIGLCLFLVLFWQFVAAPSNKKSFIANDTINGYDQASKSGPWELFGGNNYLYFIETYFYKEQYMKNTIVLKLNDDGGIKFRISSPHIQWNNEDKKWYVLNGILTTFNENKEIKVEKINNYPLDVLERPEHFYGRPLLDSMSLTEEARIIKLQKEVNMNTSRLETDLHYRISYCFSGFIIVLLASLFSKFSTQSVLVISLVMVIIVALMYYSILMIFRSMGEAGNMNPFIAAWMPNIIFAILCILAFKKFH >gi|343386600|ref|AEM22090.1| ribosomal-protein-alanine acetyltransferase, complement(1685985..1686401) [Brachyspira intermedia PWS/A] MENLEIVNNINDNIIDSISLISSKSEYTHLSKDYIKQYIKDKYHKVIIIKDDNQITGFLIYFLLEPEADIIFIASYPNNKGYGKKLLSYLFDDAKNNNVNSIKLDLHENNINAKNFYIKNGFKEIAVRKNIMMINLML >gi|343386601|ref|AEM22091.1| prolyl-tRNA synthetase, complement(1686489..1688204) [Brachyspira intermedia PWS/A] MPTLKEAPSDAIIASNKLMLRAALARKISNGLYSYLPLGVRVLNKISNIIREEMDAIGSNECIMPILVSKELLTPSGRWERFKKELFRLKDRNDVDMAMGPTHEEAFTITAQNEIQSYKDFPLTLYQIHTKFRDEIRPRFGVIRSKEFTMKDAYSFHITKECLDKTYNDMSGAYTKIFKRMGLDTVSVKADSGAMGGEGSEEFMVLSEVGEETIIFCSKCDYRANVEKANVREEEAAKSYTDKALEEVHTPNIKTINDLEKFFNTSSKNFIKSIIYKTEEDEVILVAIRGDLEINETKLSNALGGLDIELADEETVKEVTGARVGFASPVGLKKKIRIFADNSIKSVADAIVGGNKDDTHIKNVNIERDFNIDVWGDFRTAKEGDRCPVCGEVLYQKKGLELGHIFKLGDKYTEAFNFKVLDENNKEITPIMGCYGIGVNRALASVIEQNYDDKGIIFPISVAPYEAIVVAIDKETEDSFKKAEEIYNALNSIGVETMFDDRKERLGVKLNDCDLIGIPMRIIVGKKALQRGVVEFKLRKSQESVEVKVEEIIEYVKTKKQELFNEINSKL >gi|343386602|ref|AEM22092.1| putative alpha-1,2-fucosyltransferase, complement(1688290..1689270) [Brachyspira intermedia PWS/A] MLHDDYDHFINKLVWLIPFSKHRNNFRNILNDIVNTMYKIEYLTDVNNSTYYEDMIIIDQMDGFSGQLGRYMLGEYIKDHYNKKVKYNLNWYSEFGLDCDKKEKREFDLLNCFQDIKIETVTKKEANLYKRLFYYSDGNINNIYEACKLKKNIYLYVFPTLNLFDKEYINTKLDIHKNLYPRLKGNNLEMYNDIIKHPASVSVHIRRGDIYSHGGFGVFNKNEKNYKEYIFKSIYKMIDLLQPIKPKFYFFSNDMKWVKNNILKYLNKEVDYIYNDYNKNQVYMDIYLLSLAKHMIFTIGAFSRTAYMFNKNQNIIVITADNINLL >gi|343386603|ref|AEM22093.1| hypothetical protein, 1689489..1690340 [Brachyspira intermedia PWS/A] MQQAKKIDIFDDIFVYNQFNLPTDKKFEDNFYHKLKAKYRYGYWVWKPFIILNEMIKINEEDIIIYMDIGCNINDSGIKRLYEYLDIVIEYDNLCFELEFLEKCWTKGDLFNYFNKINDKSVTDSKQRCATGLILKKTEKNVSFLKEWLDVFYNDFSLIDDTKSHIHNLDGFIENRHDQSAFSILSKIHNFHSISAKEFETNDHNFPFNASRDKKFIGEKFTKDIGWLVPIKNMRDEIRNYLKYNINNFLSIHLGYKKAKSISDKIVYNFFNLILKNEVNKYL >gi|343386604|ref|AEM22094.1| 1-deoxy-D-xylulose-5-phosphate reductoisomerase, complement(1690344..1691492) [Brachyspira intermedia PWS/A] MKKRILLLGATGSIGTNTCSVVREFNNDFEIVGMSTNSKIDILNTLCTEFKPKTVNISDKNAENIFKDYDCAKNLNVYEGTIADFVKHTDFDILVNALTGYAGFLPTVEAIKKGKTIALANKETLVVGGDIINQLLKEHNANLIPIDSEHSAIFQMLRHFPKESLSKVIITASGGPFFRTLKEELKNVTVEMALKHPTWAMGSKITIDSATMMNKGFEVIEAHHLFNLDYDKIETIIHPQSLIHSMIEMNDGEIYAQIGKNDMRLPIQHALTYPQIRNTPFEKLKLYEHSEINFYKMDFDKFIMLRLAYECGKKGGLYPCVLNAANEICVYSFLEKRIGFTDIFDIVSKVCDRKINVPLTIDNIINMDSEIRKETSWIIKNK >gi|343386605|ref|AEM22095.1| inner membrane protein, 1691737..1694742 [Brachyspira intermedia PWS/A] MFFDILYNIFIYPIEFIIEILFYLFNTVFQSGYGVSLFFLSLCINFLSLPLYNIAESWQAKERAIQDKMKPMIDNIKSVYKGDQRYLLIRACQRINGYKTIYAFRGTLGLLIQIPFFMAAYNFVHSISVLNGQSFLFIKDLSKPDSLIHIGSISINLLPFIMTLFSLLAGFIYAKKLKFKESLPLYIVSLIFLVLLYTSPSGLLFYWTINCLFSLIKNIVIEFKLYEIFLKNKYKLLKVYNIFFIIITAVFILLISLASIERKAYLSDFVYSFKDGNIYGYEATIKYNSKIFKSSDLFDININTDVFLSDNIEDVLLIDNTINTKYVSISLNKKIEDIDDAINIYYKVYLKNYTINIFIIITILFIVFNMNKIFSYIFNNSIIFDIYLKNRYKLILTNCLVITILSGIFIPSSLIGASPQEFTNPFYLVINNFTISTGLFLFYPIFIYFLFSEKIKNYITLLSIFIVSILLIDTFIMKGNYININSDFIFDNSNFLKASFKEIYISVILFIFSVLILILFIKKNINILINIYFIIIITLFGISTLNIITIFKEHSKLISISNNKNDIKIFNLSKTGENIFVFILDRAINSYWIDALDRFPEYKEKLDGFIIYPNTVSFSDFTTSISSLYGGYDYLPYELSTNLSCNIKNKHNESLLTIPLSLEKYGYHSILLEPVYANLKLIPDLSIFKDYTNIKAYNNNIVDSYSLAQHFNIRDFNVNEHNKIKQKNRIFKFSIFKMIPINLRYDFYSNGDWFNYNDFNVNPSIYSYAILSNIRKFININNEGNYYNILHNMITHDPQFFSSDYLPHTIIKPVKAEDMVIYKDENSTRHFYANIASINILTNFIDFLKENDVYDNTKIIVVSDHGRDVNTTVFENKLKFVSWYNALLMYKDFNSHGNIKIENNFMTIADVPYLATKHIQGITNPFNNKIITNDYKTNGANIILLKTWDISKQFYNRYNFDIFYTVKDNIFNLHNWKKYTIDWNTKDTNWNPKDSREIELK >gi|343386606|ref|AEM22096.1| ABC-type uncharacterized transport system, 1694879..1696507 [Brachyspira intermedia PWS/A] MSNKKFNLKIATLASWVLLFFAWIFFYAVTQTPTPVFWAVLALTSIITITTLIVDRKQIVSFLKMRFVHKAFFGILSLIIILAILVGLYIISINFPIRFDLTQNKSYTVSQQTMDVLSRIDSPLSIVVLRSPSTDPTSADWRADLLLEQYKRINKHISVEYINPIEKPSAKSKYQMTQVGEIVFTYGQGKQVRVYRKDLTTQSKVTSDPLFVGEEKFTQSIYTLLDTESYTVYFTIGHGERQIQDRGGEGLSYVKTYLENENYKVKELNIILENIPTDASLIVIAAPVETFSDFEIDKLNNYVKTGGKLLVLYDSFMDRSKFNSNLGNFLSDWGFKTKNDYIIDTASSVVIPVNIVPQYTSHPITQTLKEGNVFACLVVARSILSGENKYNGSFENIITTTPQGYGKEEATFDLSRARFNPRTDIPGPVPLAISGTYEIEGRKDPARIVVFGDATFALNAYINPEQGQSVDIAFAGNKDLFMNTVAYLLEARQKITIRPKEASIKNLTLTTTQTNFIRYVAQIGLPCLFGILGILIWFLRRR >gi|343386607|ref|AEM22097.1| hypothetical protein, 1696544..1697818 [Brachyspira intermedia PWS/A] MNNIKNLYKKYSYYINYALLVFINGIASVLNYISSIYINRSLSISDFAHYNGIINIYSIIVLTVSSFSYYIMHNYKDDEDAKSYWAYGYILAIIIFVIYILSIPLMDILFNIKSYSSLLIMSIGIFASILVIVSQSILKINNYIAYDYTASLISIFIAKILLLAYFIITGLTLERAIISVSLFCVLYLIINLIELKKLKLPYYVQINKIKTYFSIKNLSEFLTYIINIVIINFIFNWISLSDVLMANRYLDKTSAGYYSTISLIIKMFFYIGTPVASVMFSYILIAKKDNNKNKERKIVYYSIALFVFASICLSAFLIIFAKQIVLIQFTNRYEAIIPLIPQAVIFGFSLGFTVIAFNYGLAYKLFAPFYGYLIIFAYVYFSLRNGLRTFENFIFIMKIFFIALLIYNILIILIHRIILRTNEN >gi|343386608|ref|AEM22098.1| ankyrin repeat-containing protein, complement(1698033..1698833) [Brachyspira intermedia PWS/A] MKKIVLMAVLCTLFSFNALYPELSKDEKEFVAYIANGNKEEVLDFLNNKKVNINLDIMDGATPLILSIIYKQDEIAKLLIEKGADLNKKEKESGATPLILSILYEQYEIAEILIEKGANVNIKDNSGFTALIHAIQREKTDLSKMLIEKKSDVNTKVSFKTDGLYLKDFTPLTFNVDTEVAELLIKSGANINTRLSIKDDSRNIQLENITPLMWVIFDYNTEIAELLIEAGADLNAKDKNGNTALDYARYRNDSKIEKILIENGSK >gi|343386609|ref|AEM22099.1| ankyrin repeat-containing protein, complement(1699057..1699755) [Brachyspira intermedia PWS/A] MKKIVLMAMLYTLFSFNALYPANSENEALFLSYIASGDIEEVSNFIDNKKININARIKNSATPLIFSIIFKQDEIAKMLIEKGSDLNIKDNLGFTALIYSIMYNRTEISKILIEKKSDVNTKVSLNENGVYMKNVTPLILNENKEVAQSLINASADINIKFSFQDAGENIKLENITPLIWFIFTDNSEIVKLLIESGADVNAKDKSGKTALDYAKDKNNPKIEQLLISKGAK >gi|343386610|ref|AEM22100.1| ankyrin repeat-containing protein, complement(1699991..1700689) [Brachyspira intermedia PWS/A] MKKIVLMVVLYTLFSFNALYPANEETEAQFFLYIGSGNIEEVSNYIDDKKININAKLDDGMTPLILSIVYKQDEIAKMLIEKGANLNIKDKSGFTALIHSIMKNRTEVSKMLIEKKADVNIKLSLNENGIYMKNFTPLILNEDKEVAQSLISAGADINIKLTAKYPGQDLKLENATPLMWFILNDNTEIAQLLIEAGADINAKDKSGKTALDYAKEKNNTKIEELLIAKNAN >gi|343386611|ref|AEM22101.1| cAMP-dependent protein kinase regulatory chain, complement(1700976..1701611) [Brachyspira intermedia PWS/A] MDNNLSSHTKKYNTDDVIFLEYEKGDKFYLVQSGSVKITKVIKDVEKLLDIVYAGEFFGEMAILEDTTRSASAIANEPTVLLELRKENFQSILANNTVMALKLSKTFAKRIFDAKRRLLILQLNETDLRVYDCLLLLAELQNIPRDHYYEPQELNATINDIANWCGVKVVDVQKVLNTLVKTGKIDIRTNTIYVKNLKEIQRQIDLKRKKS >gi|343386612|ref|AEM22102.1| cAMP-binding protein, complement(1701637..1702623) [Brachyspira intermedia PWS/A] MQTRVYKAGSIVYFTGDTSDRVYILKQGQAQSIFLSEETGYETRELINIGEFFGVKSILGTYPQEDTVQCLTDCVVIIITYEEFESLIEKNKPIIIKMLKVFSNQLRRINKRVRELVENDISEEGQDPLEGLYGIGEFYFKNKKYRNALYAYKRYIQYADEDSAFYNTVKEKIEECKEELDITDDSDIAPPVSNAPASAPKTQAKAAINDPAYNKAVELYNNNDYVNSLKAFNNLIKSPDTAVAENSIFYMGKCYYNINKYDNASTVLLSAIKKYPKSQNVKEAILFLAKSCEGSGNKTKAKAYYQKVISMPPMDNFSKEANASISRL >gi|343386613|ref|AEM22103.1| Predicted flavin-nucleotide-binding protein, complement(1702737..1703324) [Brachyspira intermedia PWS/A] MRRKDFIFEDKEEIYSMLNSIEFGVMALPDDIPYAVPISFCYKNNEIYFHGAMAGRKYEILKNNPKVSFSASKPYSYIPSEFLNGKMIPTQFFFSVFIEGKFETIDDISRRKEILYEIVKKYEPNNDNLSIDNKMFDYAQNNMLIGVIKIENLTAKAKFGQNMQDEEITIIIDDLNTRSKDIDIETVDMINKLRK >gi|343386614|ref|AEM22104.1| D+ synthetase, 1703463..1705355 [Brachyspira intermedia PWS/A] MKIAVSQLEIIPSMPCDNTVRIISFISKAKKENADIVIFPELCVSGYMIGDMFESEGFIKECEELGEEIIKSSNGIYVIFGNIASDKNKKNFDGRIRKYNAMFVAKDGKLIHNNTTEYPFIIKSLLPNYKEFEDPRHFFSLKDLAFENNADIKEYLKPLEIECNGEKIKLGLTICEDAWSKNYTFSPMDIINSNKDVDLFINISSSPYTLVKDAKRHSMYGEIASKHNTPLIYINNVGIQNNGKTVYTFDGRSSVYDNKGNLLLTGKRYEEDLYFIDIDVKNKAFGKTIEIKEENEYKLIYETVIYGIRKFMKSIGINKVVIGVSGGIDSALSSVMYVNAIGKDNVLLVNMPSKFNSDTTKNLAKTLSDNLGCAYMVVPIQESVDYTVKQLESSPIIKDGKEDHLKLSSFVIENIQARDRSSRVLSAIAASFGGVFTCNANKTETMVGYSTMYGDGAGFFACLADLWKYQIYGLANYVNKEVFKKEIIPEGTINIVPSAELSTAQAVDEGKGDPIKYDYHDYLFKFLMESWNRAILEDILELYIEGNLEEKIGCQKGTLKKYFKNGAEFVDDLERWWKQYMGMGISKRIQAPPILAVSRRSFGFGNRESQNRIYYTAKYLNLKNKIFEIN >gi|343386615|ref|AEM22105.1| putative methyl-accepting chemotaxis protein, 1705488..1707416 [Brachyspira intermedia PWS/A] MAATIIDNNIRQDILDYSAILETTVKDINSFLEEVGRVYSFIGEKFPMIEQEMKNENEKANKLLSYFTNKEKGEKNFSNDLDENQEDFFRSFDRMQSFISQDNELSDSLVEDVGRTSNIMDSIEQIRMLADQIKVYSLNAIIISSKYGAGGKAFGEISKNIIKMSETSNEQADQMNRIGKELFVRFESFKTEILKTNELQRQNFTIMREQLDKEHNNMVNSFAVFSNIISDIISRVDNTYDFIFEVMMVLPREDIVRQQTEHIIESMNSIVYENRNFIEYYGKEVETMDAADLEKEENQSLEHKLLDLLTFDDVVLTLIIENFKSIHEEIDLTNSDIYKSLKGLKDALTDITLDRTTIVEYMIGGESGKSEFPFTVSESLFNEYMGFIKLYLENFKLFLTNKYRISDSNIAIIDSIEELESMFLETKNIAKTFNSINFLAKIELEKNSDIFNNSQTFSIESVESIATNITETVDGCLEQFHNIKSAIFSSINKFKSNINQQSSEHSFIESMTDSVSKRLDESKYIINNNIKRLDSYADELFGLIDKTLIDLSSLSTLLTKINEIIEIFNSMRNVIRDKKNEYYNLLGIENWKIESDKYLDIVNSYTIKKERAIANSILSGEDAPNVDISIDVGADSGDFTMF >gi|343386616|ref|AEM22106.1| anti-sigma-factor antagonist, 1707441..1707704 [Brachyspira intermedia PWS/A] MSVIEINDNLNIRTMSKYFKNVIKSANYNEDMTVKFNCEGDAHVDLAGLQILYAMKKELAKNQKNLIVEGMDNLFVEYLKIINDKNN >gi|343386617|ref|AEM22107.1| chemotaxis response regulator CheY, 1707724..1708092 [Brachyspira intermedia PWS/A] MAKTILIVDDSNTARASVEYTLKKGSYTVVSADDGTTGLEVLGKTPNVDMIITDLNMPKMDGIEFIKHVRKVDQHKYTPILMLTTESQDEKKMEGKAAGASGWLVKPFNPTQLLDVVKRFLN >gi|343386618|ref|AEM22108.1| chemotaxis histidine kinase CheA, 1708231..1710327 [Brachyspira intermedia PWS/A] MEDNKSDEDLLNKIFRSAHTLKSSAGTVGFTTMSELNHVAENLLEKVRSGKLDVTPQMITVLLEFLDTVKLMLQNIVDGKSETEGVTNIDSLKAKIKAIADGNDVSTAAAAPKASPEPKKEEPKKEEAKATETKPEEKKEDTKADESSATSGGENSFHIEMGFKATIFDNGIDPLMFLNDLRAIGTISNLKIECNSLPTILNLEDPYVCYTQFSLDFETNAPEEQVQNIFLFVIDDNDINIINTKAEIKDDDEANKAVETKEEQPAKEEAKEDTAAKPEEKPAETAAAASKPAAAPKTGTKVQAPSTVRVDTRKLDSLMNLIGELVIAQSRIMQLTQSLDIDNGLKEAVSSMDRTSRQIQEEVMNIRMMPIGPIFTQFHRYVRDLNLELNKEVKLVLKGETTEIDKNMLEQLSDPLKHIIRNSMDHGIEKTKEERIARGKPEYGTITMSAAHQEGHVVIEVSDDGNGLNKEKIFNKAVEKGLLSKDGKYSDIEIYRTIFSPGLSTAEKITDISGRGVGMDVVRANVEKMKGKIEIKSAEGQGSTFIIKLPLTLAIIEGITFALGKQIYIMPLISIIEQIKVKNEQVKPFEGKGEMIKIRDEYLPLIRLHKVFEIDTQVENIDDGIVVVVEAGYRKCAIFVDELLDQQQVVIKSLDSAFSKHAGIAGGTILGDGRIALIIDIQGLVNMSLQGKINNGVK >gi|343386619|ref|AEM22109.1| chemotaxis protein CheW, 1710339..1710869 [Brachyspira intermedia PWS/A] MLDNQKINAANIPQVGGTSLEHDENISIEPSQQFLVFKIDNEEYALDVLSIEGIVGVTNITPVPGSPKFMRGLMNLRGNILHIVDIRIRFGLDRRDDHSIEDDVIIVISTTNRKFGILADMVSDVITVYESQMTETPIDNMRGLQISNVIRLENKIIMVLPIEEIIKSNETTNQTV >gi|343386620|ref|AEM22110.1| chemotaxis protein methyltransferase CheR, 1710888..1711739 [Brachyspira intermedia PWS/A] MEDMNEHMPALSDAEFNELVKIIYDKTRIQMTSHKRALVTSRLSKRLRALKMDSFREYIDFVKNAKDEELTNFVNAVTTNKTDFFRENKHFEYMKSTFLPDWEKNFKAGKVKNLRIWSAACSTGEEPYTIQMTLHEYFGANYDKYDIKVLASDIDTNVLAHGRAGIYKEESVEPIQENILRKYFLKGTGDKEGLYKVKDILKKNLFFRQLNFKDEDFDIHTQFDLIFCRNVIIYFDKEFQKELFNKFHRYLKEDSLVFIGHSETLFGVSDKFKYVASNIYKKI >gi|343386621|ref|AEM22111.1| chemotaxis protein CheD, 1711756..1712349 [Brachyspira intermedia PWS/A] MIDFPAAANSNFKRITIYIGGYYASKEPAVIKTVLGSCISVCLFENKLKFGGMNHFMLPEMREWENPAEDYNNTRYGVFAMEVLINEIIKLGGKKENLTAKIFGGGHVLSGMTSNILQVPDKNIQFAKKFLADEKIPIVSEDIGGSWPRKVFFFNTENRVLMKKLEGKTKEFSAEQEIKYSKNLQHKLEEKSDITLF >gi|343386622|ref|AEM22112.1| response regulator receiver modulated CheB methylesterase, 1712374..1713507 [Brachyspira intermedia PWS/A] MATKIKVLAIDDSALIRQLLTKIVNSDPALEMVGTAANPILAENKVKNLKPDIITLDIEMPEMDGITYLKKLMLNNPIPVIMFSSLLDKHRELALDALNIGAFDYVIKPSANVRDGVEELATDLVEKIKNAYANRAKFYRKHGVTVPTEPAATTERSSISLEAPKTAGFKVYQKNTADIILPLTPSRETPMDKIILIGSSTGGTEALIECLKNVTPSAPPIVIAQHMPEHFTTSFAKRLNSILKIDVFESEDGMSVGRGQAVLARGAKHTMIKVRGGKYYIEVRDGEPVTRHKPSVDVLFRSGAVYAKNKAIGIILTGMGDDGANGMKEMKDAGAYNIAQNEETCTVFGMPREAIARGGVDEVLPLDKILAAALKRV >gi|343386623|ref|AEM22113.1| hypothetical protein, 1713601..1714329 [Brachyspira intermedia PWS/A] MDFISKLISSHKQFNNISIIPTGSKRNRTDINYMEYLNIFLILDDTTNTSDTRKFKSSILELIKNNDLYSNKVNVTSSSLILEYESEKIVLIPSFKNLDNNVEGALVTDSNEKNEIFYPKLDNRNFDKKEHDCGANFINLIKLFKNLFLAFSAEIKYINELTPAITEALIWNLPNEYFQFKDYADAILKALDYIYQRIASDDYMSLSEINDIKVLFSSRNNMDRKELLKALYKLKQFIHENI >gi|343386624|ref|AEM22114.1| glutamine synthetase, 1714439..1716526 [Brachyspira intermedia PWS/A] MKKIPEIFGSMVFNDNVMKDKLPKDIYKKLIKTIKNGERLNLEVANVVAHAMKEWAIEKGATHFTHWFQPMTGITAEKHTSFITQTDDGSIRMEFTGKELVQGEPDASSFPSGGLRATFEARGYTAWDPTSYAFIKDDTLCIPSAFCSYSGESLDKKTPLLRSMEVIEKEAKRILKLFGYDDVNRVFTTVGAEQEYFLIDRDLYLQRPDLRYCKRTLFGACPPKGQELEDHYFGAIKPRVLAFMKELDHELWKLGIVAKTEHNEAAPGQYELAPEFTVTNMATDQNQITMELMKVIAEKHNLACILHEKPFTGVNGSGKHNNWSIATDTGLNLLDPGDNPSKNKRFLLFLVAILKAVDEYQDLLRITTASASNDHRLGAAEAPPAIISIFLGDDITEILESLESSKKYKGKEKVEMEMGVNSLARLTKDTTDRNRTSPLAFTGNKFEFRMVGSSLSVSGPNIILNTIVAEALSQFADILEKSDNLEKDIDELIRETFKKHKRIVYNGNNYSNEWVKEAEKRGLFNLKTTPEALPHFISKKNIEVLTKHKVLTEAEIHSRYEISMEEYVKEINIEALTLIDMVHKQILPYSIEYVGELANTADKKRNLKLKFDVEKKLINKLNDLIKDLDSKLEKLEGYTVEAKKINDIAKSAKFSRDKIFACLEDMRVTIDELERTVSKKYWKLPTYGDMLYSLS >gi|343386625|ref|AEM22115.1| putative transcriptional regulator, complement(1716849..1717613) [Brachyspira intermedia PWS/A] MSDKKKFERLFELYTSLILDGFIDKKKFKYFNDSSKRTALRDIDEIEKYLKIDLISEHNRYTIKKDDLKKLKKGFNFDDDNLKKNVDILFSVFMKKISSNLALIPNSTIYKLLPQNVDNEYYDVIVISNNDINNISGDGENIEKLLSCVKDLNDINFDYYIQSSNINYKVKAIAYLIYYFQGIWYLVAYDHKHQKIKTYSISNISNIEIIQKLKFNNIKEKEEYEKEHKNRIDYREKLIKLIEKKKVYIGVIIN >gi|343386626|ref|AEM22116.1| hypothetical protein, complement(1717625..1718755) [Brachyspira intermedia PWS/A] MRIKKRLVAKKDDYYEYSSSYIRKYIAIIIVALFIILFTAIFIHVNYRVIPLKAYMRNDTPVLDANTLSITNNNGIYYTGDFTSIPKSIHINDDMVENLYLYLFHDNHIIFWKLYKYGLKRYFSYYAFNIFDGDSQSFIIKENEKDFLDFYDNFVRAQFRKNVGEFSIEIPNFYNTKINIKSSIENLINAEFSFKFTNFTASMVNWKYNRALYTAFYYGLPSGYLVVPGSENAITDTSSVMAVNTVGRNPSRYAHNIIAALVYTSYTTDPIPVFIYDSKPESQNSRIIKFLFKNKWYVYKNFESHEYKDVIDYYSKEEGFSFVFTVTGNYLYESFGGFSKIDMETTKGILDGYFTINNEQFNINGNAVKEFVHSVF >gi|343386627|ref|AEM22117.1| Predicted metal-dependent enzyme, complement(1718746..1719876) [Brachyspira intermedia PWS/A] MLERILYLVYYIPYFNFKIDEVYNLSKQLDENRIKEGVGGQAVIEGIMLRNKSHYVVAVRKPDKQIDFIKAAIPENKNKLSKMPFIRGVVNFVDMMRLGYKTLVFSANTAGIEEENNKKDSKPKSEKSENIAMTLSMLVSLAFAVGLFIALPYFITTLIGIDEKSNFVVFNLVRGCIKLSIFVLYLLVISFFKDIKRVFEYHGAEHMVVNAYEHGLDPDTGNIRDYTTIHPRCGTTFMFLVLTVSILLYMFTSYFVYTYIYASYTPPKIVGNLTVLAINIILLPIVSGISYEILKLGFKFYNFPLMRLAILPGLALQKITTRRPQDDEIEVALFALSKLLDTSIEKRTEEEVQESIKASLENNDNIKSDTEEKLCV >gi|343386628|ref|AEM22118.1| hypothetical protein, 1719932..1720345 [Brachyspira intermedia PWS/A] MILIINFIILAFISCKSTTPQMKEVQEKSPVKKEEQIPKATTLKDRVGYYKSKSPYFTFNADLKENGYAYVVLKGWMVYRGYVKVGDPSSEATKFRLDIDNITYVILEFKDLNNAKASVILKEVVQQVLPMSKVQNQ >gi|343386629|ref|AEM22119.1| Glycerol-3-phosphate dehydrogenase (D(P)(+)), complement(1720397..1721353) [Brachyspira intermedia PWS/A] MISVGIIGAGGWGLALANIFSEKHNVKVWVHSEDSYKLLSTSYRNDNYLENIELNKNIQFTMDIGDAVNDSEIVIIVTPSFAFAEACTNIEPYISNDQILVSATKGLDRKTGKTMSEVARSIISGDLSILTLSGPSHAEEAAKGVPTAVVVGGEKGVSEYVRDTLTVPPKFRIYNSTDQKGVEIGGALKNIIAIAGGIVDGLKLGDNTKAALITRGLHEIVRFALSKGARIDTMYGLSGIGDLIVTCSSGLSRNNRLGRELAKGKKYQDVIAESHGQVAEGVYATTAAYEYAQKNIYICQSQKPYIIYFSIMRIYRIL >gi|343386630|ref|AEM22120.1| transcriptional regulator, TetR family, complement(1721445..1722005) [Brachyspira intermedia PWS/A] MKNDKKDLRILKTEKLLKESLLELLKTNSLKDISVTEICDNAMINRVTFYDHFNNKEELLNSIIEDIKQDVIKELKKDNSIYDFKKNYRKILEKVINYFDDNKQYFDVSLIDHNNTILFVSSLHKIFIDYLGETMKEDNIENTKIISQFFSGALVSVIFCWVKDNNKINKEDLLNNICILLEKSFK >gi|343386631|ref|AEM22121.1| hypothetical protein, 1722084..1722200 [Brachyspira intermedia PWS/A] MKIYFIHKYTLYFNKKQINLLAKNNIYYTINKFFDRDM >gi|343386632|ref|AEM22122.1| transcriptional regulator, PadR-like family, 1722657..1722989 [Brachyspira intermedia PWS/A] MNYDDIVSNLMQELRRGTLIIVVLSQLKKEEYGYNLITKLKENGITVEANTLYPLLRRLENQGLLKSEWNTKEDKPRKYYSITKDGKEVLKKAVHHWKEFSSNVNKIIDK >gi|343386633|ref|AEM22123.1| hypothetical protein, 1723013..1724017 [Brachyspira intermedia PWS/A] MKNKENKKAEDIIERYIYTVTKSMPDKIKEDVSNEIRTLIDDIIKERFSNSDYKINDIKNILTEIGNPYELACKYDTNYNKSLIGYPYYIYYKLVLKIVLSSTLLGIVVSSIFNIFINNEAFNLINTASDIFTALLLAFSFVTLIFVFISNKNIDISSITVDFDNLPKPINKKRSLYNSIIKIYAAIIFLSLLFLSPNIFSIKINNEYFAFFNIDIIKNSFLFPLIFILMLISREIIKMFSNTYNKKTSILFIGIDIVSAIASSLWLLSYNVININFINALTKLESANSLAFNIFNNFQLFCLICILFALFLDSIYVLLKLKNNLAYKRYICKV >gi|343386634|ref|AEM22124.1| trehalose-6-phosphate hydrolase, complement(1724048..1725712) [Brachyspira intermedia PWS/A] MNFKNKVVYQIYPKSFMDSNNDGFGDIKGIISKLDYLQNLGVDIIWSTPFFVSPQKDNGYDVADYYNVAPSYGTMEDVEELIKEAKKRNIDIMFDMVFNHTSTEHEWFNRAMNGEEKYKNYYIFKKGKVVDGKKIPPTNWVSKFGGNAWQYVEKFDEYYLHLFDVSQADLNWDNKEVRKEIFDIVNFWIKKGVYGFRFDVINLISKPEVFKDDFEGDGRRFYTDGINIHKYLKELNKNTFGKYDNAITVGEMSSTSIENCIKYSGEKENELSMVFSFHHLKVDYKNNDKWQLMDFDFQELKNILFSWQEGMQDNNAWSALFWCNHDQPRIVSRFGDDKKYHKESAKMLATVIHCLRGTPYIYQGEEIGMTNAYFDNINQYKDVESINYFNILKNNGIEEKEIYKILQSRSRDNSRTPMQWNNKENAGFSNAKPWIEVISNYKDINAENNINDENSIFNHYKKLIKLRKDYKVISEGKTIPILKDDKNVFAFIREYNNEKLLVINNFYGNECTIDLSNIDFDIKKSKCLLSNYDEAVLDNTLKLRPYESIVLYNK >gi|343386635|ref|AEM22125.1| trehalose PTS system, IIABC component, complement(1725832..1727760) [Brachyspira intermedia PWS/A] MGKFTEDATLLLKYVGGKENVKAITHCVTRMRFVLVDTKKADIKAIEKLKSTKGTFTQSGQFQVIIGNEVSEYYNEFVKISGIEGVSKDAVKESAKGNQTFLQRLMSNIAEIFSPLIPAIICGGFILGFRSVISDIKFFEEGTKSLTQISQFWAGTNDFLWLIGEAIFHFLPVGITWSITRKMGTTQILGIVLGITLVSPQLVNAYLVGSVDPKFYDFGIFKMPMVGYQAQVIPAIMAGFILVYLEKFWRKVVPEYVSMVIIPFASLIPTVIIAHAVVGPIGWKIGEAVSYVVYTGLTSKFGVLFAGVFGFFYAPLVITGLHHMSNAIDLQLMSQFGGTMLWPMIALSNIAQGSAVVAMSILQKRNNKAKQINIPAFISCYLGVTEPALFGVNLKYGFPFICGLIGSCVAAIISVGSKVMATSIGIGGIPGILSIQPKHMLMFAVAMIFAIAIPLVLTLIVGKKKLKPEDLTDNIESSETVSDNASAAEAITLDDDNFVSPMNGKLYKLSDIADEAFSSGAMGEGFAIELADGMVTSPCDGEIIAAFPTKHAYGIETANGNEILIHIGMDTVELNGEGFESFVKVGDKIKKGDKIAKVDLEYVKNHGKSLVSPVVFTDGTKINLLKENTIIKNGEGKIIEIK >gi|343386636|ref|AEM22126.1| trehalose operon repressor, complement(1728316..1729026) [Brachyspira intermedia PWS/A] MASKYEEIYNSLLDKIRFGYYKKGDILPSEYDLMKEYDASRDTIRKSLQLLSNNGCIQKHKGKGSIVINSNIYNFEFGGIFSFKEVASKMYGKKVETIVHRCECIKPDALVKSALKLNDDDKVWAIERIRNIDGENIILDIDFINASIIPFIDENILKDSLYEHIEKNLQLKISYAEREISCEKINNNDKKLLDLKDYDMVINVESRTFLSDTRVFQITSARHRPDKFKFRDFARR >gi|343386637|ref|AEM22127.1| putative outer membrane component of multidrug efflux, 1729202..1730722 [Brachyspira intermedia PWS/A] MNKSVEEIDIYYFFTFSFFNFFIFAQTNNTNTIILPYAQYMERIKLLIPEMKLTASQESNAANNLTKAKSSGDVKFDLQAGAIGKQSHFDEYNFLPTSDFNYNGFRIGAGFSGLVPYSGTRWSVEIKHDSFFGNFNTGDISLPVDTPFGTVNGKLPNLSTNNFKYYYPSIKIQIAQPILRDFFGKLDRYPIKDAEYQLTIAKLKRIIDDNSVLTSYQKIYYQWIMARKLIALYNEMIREARSFENQVYKRYTSGVIDNDSYQNAKRQTLKYIEARDKSELMLKKVMRNIQFFIPEENIQPNEEDWNQTLETSINAKIDIVPFLESAQGQMAYQLKLRSEYAISVMKNNALPDLSIVGSVSLSSLDDSGYFKSFSTMTNVDYFVGLMFSYPIGGRDAKAKMEDAYAALNAVTADFDRVNRDFDVQIGTYYDEFEAYKKMLENKKLEVNAIVSRINTQNAKFRQGRLPIDEIINARLDLAQARAELLNLQYLIITTVMDYNSLVLLNN >gi|343386638|ref|AEM22128.1| acriflavin resistance protein, 1730743..1733913 [Brachyspira intermedia PWS/A] MDKIIELFAKNRLLVNVIILVTLAVGIYSYLNIKKEAFPSTNFDVMIVQVIYPGASPEDVEQYAMIPLEDELQTIAGIDEFYSIIIENAGILTIRIDMNLKDSRPVKDEIFRRLQNAPNVSKDVSEIKIFEANANRLPIYNLGLRFKKGMEGSEKELYDISKKFEKELKYVDGVANIEVYGRTDPEIQILADPNKLNEYYTSLSEIVQALSLRNIRSTSGSMKPDENADLEEKNKLLVTTGQFQDPLSITNVIIRSIFNGQPIRIGDVARVEELFVDKSVYMRVNSQSGYSINIIKKEDADILKTIYNVNAYFEKNKDTIPNNIEIVPMADNSRTINDLLNAVSSNIITGFIIIFVILIIFLDFKSAIFTSLGMLIVISVSLIYMTYSGITFNIISLGGIITVLGMIVDNSIVVSENIFNYHQRGIRGLDATKSAVGEVFMPMLVSTLTTVASFAPIIFVTGTMGRLINQYPRVVIVALVVSIFQAVLLLPNNLITKEELTGEHKRKRFNFKNPLDFDKDKLFDKLKIPFVKFLRFTLKFRYIVLIFFVITLLITLVIARVIFAKFTLVYDTSADVIVVNMDTGVGSSLYKTEKYLQQVENIIYETVNTNDIIAVYSLLGKQLDKNTVEVSEEMDNLAGIMIYLVPANNRKKIAYDIVDDLNLAIEKSGIKKELALITVNTKLPINPGKAVDIKIIGNDTAMVKEVKDKMKEHLLSLNGIINYDDDDKIGQEELRVIFDYDRMGELGVNVAYAARELRAAYAGIVATSIQQFENKLDFRVRLDKKYTYDTNVLNNLYIPNTYNRLIQLKDIADIYITNNQSSIKHYNGKKSITMTADIEQGKNTAIQATYAMQDYFNSISKDYPNISVEFAGEVKETRGSIIGIAWGYVIAIIAIYVILLLQFNKFVQPFMILGIIPFGIIGVILGFAAHRMPMSFVGAVGIVGLAGVVVNNGIIMVDLINRILEQGNIHTKEDVLNAVVEGAGDRFRAIFLTTVTTIFGLLPTVYGIGGRADLIVPMVMAMAYGLLFAALLTLILLPCLFMISADLKLIKINYKN >gi|343386639|ref|AEM22129.1| hypothetical protein, complement(1733975..1734151) [Brachyspira intermedia PWS/A] MPSKHLVKQNEDLKQIAIQYYGTTQKINLIIKSNSFLAVREIINSLPQIIEGDILFIP >gi|343386640|ref|AEM22130.1| DNA circulation family protein, complement(1734179..1735429) [Brachyspira intermedia PWS/A] MSWEDRLLEASYISPSGIPFNFLYEDVSYEFDKKTTSFIFPDIDGAYVQDMGVGENRYPLNIIFCGENYDLEADRFVKALKEKGRGTLIHPKYGIKKVVPFGTIKRNDGIVNNANQCIFEIIFIEDNIRTDNSLLESISNIIDKIQNCVDVYAQYASFNFVKTFAVTSVGELITIRDIATQSFTDVFNQISYIAGINDDYDSILKLLNDSFIDTINEIGNKPINAINMLMSAMLIPAQIPNYDVSSKLDIFENLINPKLKTKYNKSIYDANIANTNFAIDKVFMYTAAAGMCQSVIYSEIKTRDKALEINDRINNNYNNIQKWLDDNIKSLSFTDDESDYNNILELISQTKNYLVNNAFNLSSANKIILDEDRNIFELVSELYGSLENIDDFISLNKLNIQEIGILPKGKEIVYYL >gi|343386641|ref|AEM22131.1| putative prophage protein, complement(1735430..1736830) [Brachyspira intermedia PWS/A] MMKSSGLAGDKLVTMSQNMSALAGDMASFYSLDIEDAFEKIKSGISGETEPLKALGIDMSVGNLEEAFDIDWKSLTSAEKTMYRYKYLMKASKDAQGDFLRTMDNSLANQRRVIGTTISQILARLGSVFLPGLIKISSSILKAIQSIDVEDIASKLETFVSSIDFDYIINNIKNTISDIISFIKQIDFNSIFNKVKDIVSRIFYFVKQIDFKTILNFMFNLIKTSITIISILKPFIPIILAIVAAFKSYQTIMLAAAIAQMAFNIIMAANPISIIIIAVGILIGLIYILIKNWDTVKNAVINFVNTALNFLDNLFNKIYEFIDSAPWFLQAFIMPFKIGIDLVRTLLAVWKNVVNAFKENGIKSALIEIGKGIIALLITPLQNVLGLISKIPLVGNITSRLSEKMNDIKSSLVAPTTKEERANVTKTIENTTKGIVEIRDTTGKAKMTRPINTKNPNITFKPSGAF >gi|343386642|ref|AEM22132.1| putative prophage protein, complement(1736836..1737261) [Brachyspira intermedia PWS/A] MASKYSIEAVFKAIDQFTAPIRNMQKSSNKLSASIQTDFAKAQREALKFKDNFSKNVSKAVSSIGKITAKIGIASSVAAGVAGAAFIKISKDAIDLASDLTEVQNVVVVTFGKNADKINGPKLLYSLSDFQSFKLKSLQVH >gi|343386643|ref|AEM22133.1| hypothetical protein, complement(1737272..1737412) [Brachyspira intermedia PWS/A] MLLQICSDYSSLPNIENMTIEQIKFFYNPLISSLIETQKEISKLKK >gi|343386644|ref|AEM22134.1| hypothetical protein, complement(1737475..1737588) [Brachyspira intermedia PWS/A] MYSVIGNMIGRDPKFISNLDGADSKLLQAVMILFIQG >gi|343386645|ref|AEM22135.1| hypothetical protein, complement(1737607..1737894) [Brachyspira intermedia PWS/A] MEIKIERKTAEIEFNDFCEMWDIDNDVSIMSEEDKEGFEKQKNTIIKAIMQGRLTINKEDRTLKYIVSEFSEKSGEELKIRRLKGADYMSMDNYK >gi|343386646|ref|AEM22136.1| hypothetical protein, complement(1737898..1738278) [Brachyspira intermedia PWS/A] MAGVGGPIKGIYIDGRNFVVDGEVDAQFFPGGFTNEVKPNGDGTQRLVKSIKPSELNDIPIVIDDSRGDEEFLQNVMNKHEFVQISFTTINGDVFSGLGQIVGDAYTSKKEQTKTVSFQGTFEKQG >gi|343386647|ref|AEM22137.1| putative tail protein, complement(1738520..1739992) [Brachyspira intermedia PWS/A] MSVDVSALSRVLGIDVTPRNFNVGSAMFLPQRIAIIGQGNSNAQYTLDKYSVTTLGDVAEKYGYGSPIHLACRMLFPTNNDGIGGIPVTIYPLTDKESSVAANGEITVTGNATEQKSVKIYIGGIACQFLVSKGDNADSVLTKIKTSIDSILEMPVTTGEISESKLPITAKWKGESGNQISIDISEAIVKGLTFSITKFSNGALNPDVDTALNKIGEVWETFILNLLNYDDEDTLSKYRNFGEGRWNNLIRKPCLVANGCTDDFNTRTAITNGDAQITDRINFLITSVGSRELPFCIAARGLAKDIVSTANNNPPQNYKGYLTQLEAGKDEEQEDYTVRNNAVKLGSSTNIKVGNTAVLNDIVTFYHPANDDIGVYKYVCDLVKIMNVLFNCELIFASDEWKGAPLLPDSAVTENPTAKQPKNAKAALMTLADSLEKNAIISDKEFTKANITASIDKQNPKRINWTFPVKISGNVEIISGDIYVGVYLEK >gi|343386648|ref|AEM22138.1| hypothetical protein, complement(1740262..1740945) [Brachyspira intermedia PWS/A] MNAIINKLIDKKDTFEIIRLKIASILKYELENQKKLAKEQGKDDNKYNIDIYVERINPWLIYSNEINGDEKGALPLVNITFESDNLTQSGSMNIVRQKSQGTFYIDCYALKNKSFDENADEASSKEADRISTIIRNILMYSGYLCLGLEGLVVRRYITKREKLTQNSDSNSSESVSVCRLTLIVDYAEYSFEEDPVVLESIIGECLLNDTGKVIFNADYISEPKPSA >gi|343386649|ref|AEM22139.1| hypothetical protein, complement(1740965..1741189) [Brachyspira intermedia PWS/A] MVGVSSRQVEITCCIETLKNKGFAYPSKNWILSYINTNNEEFYFSIKQIRPDRTLGIYNLVLEIMKIDKIPIKE >gi|343386650|ref|AEM22140.1| hypothetical protein, complement(1741201..1741344) [Brachyspira intermedia PWS/A] MNLLEQAKKDLRFTLEDINNGFGTEFQFNDGTKIEPIICNVSDIGFF >gi|343386651|ref|AEM22141.1| hypothetical protein, complement(1741341..1741583) [Brachyspira intermedia PWS/A] MKYRICKGKAISTRKGIINELEEIDESLLDRNAEKLLNVKIIEKIEEDNTETSSQQENNTISEEENKEKKYSKNMGAKKN >gi|343386652|ref|AEM22142.1| putative phage protein, complement(1741608..1742696) [Brachyspira intermedia PWS/A] MPNIREAFLKSYKERQVLNPFLSKWFKTTPRDIVSAGKVKIDIMRSSSKVAPVVTALSEHSPKLIRTEYTEKEFTPPKVAIGFDITAEDIDTKVFGLDPYASANVPYIADLQSRIMDKMREGELAIARNIEYQASQIFQTGKLTLQDDKGNNVYEIDYKPKASHIVTVSTAWSDYTNSDPDKDISNLYKEILKDGKTRAVNIIFGSNAWENYCNNSKVKDKLNLRNANVGIVDPKYLYDDADYLGELLIGTNRFRCYCYEGYYTNASGKDVNFLDPDKVIMIPDSESINCDFRKIYCTSSTITGVDPRLESIIPSYMNLENRAYTIRAWLNEPADSLSAEISTRPLLIPVSLDSFGCIKTTV >gi|343386653|ref|AEM22143.1| hypothetical protein, complement(1742789..1743157) [Brachyspira intermedia PWS/A] MSNIKEEKISYDGVIRNVLKSETPLVTLEASSPIKKGTILMRNGDKYKPYETGSSDPVGIALNDVEETEAGDYPVGVMLSGSADINRVILKGQEAGTGITTEIKYKLRMYSIYLESYIEIGK >gi|343386654|ref|AEM22144.1| putative phage protein, complement(1743169..1744245) [Brachyspira intermedia PWS/A] MNKISISGIIGWYFTSRDFRNLTQNMNGDLEIEITSPGGFVFSGIEIHNLIKEYSNNKGKVTIKIIGLCASIASYIAMAGDKIISYDNAVFMIHNVSISTSGDYRELNKQAKEIEALTNIIAKAYSKKLNIDINEIRKLMDNETFYYGEEILGFSDEVVSNGNGEVSNKEEAYILAKNRIYSCINKMSESNKAKDDLKKAVAFLALAVNTDDENNDLNNSSNNITKTAEFINTSENNNTKKEDKEIMDLQELKEQQPELYKTVFNLGIEHERKRVMAHIKLGKASNLIDKSISYIENGASISDDEVLAEYHSAQLSKNILNMHIEENPENTNMLSEEDKDKALEEQYLNELNKYNPKR >gi|343386655|ref|AEM22145.1| hypothetical protein, complement(1744454..1744567) [Brachyspira intermedia PWS/A] MLTQKDLIKEYQNNLKKISEWQEWYKINTSSNYFYNK >gi|343386656|ref|AEM22146.1| hypothetical protein, complement(1744698..1745021) [Brachyspira intermedia PWS/A] MKSKYFIYFLITGIVFGYISFLNYTIKTKDKKIKYLEKEIYTAKIEISNITALKNINFEKRQIYIDETFKNSSNLINEIENKNLTKNELRALNTSIENYYKIASNKK >gi|343386657|ref|AEM22147.1| hypothetical protein, complement(1745050..1745343) [Brachyspira intermedia PWS/A] MKKLFGFLDSKGLGKKTSWFTSIGAFAFGIIMTSFIMITQKRFPNYNESIAIVIVMWGASLVTGTTDLSIIINNFFKAKYNYKENYKENDSNNQHNN >gi|343386658|ref|AEM22148.1| hypothetical protein, complement(1745345..1745755) [Brachyspira intermedia PWS/A] MPRTTISDLDKRIASICHRIGINEDGSSNGNGLINTMKEIKERLDSHEKYLDNLSEDMVKIDYRLEKLESLAKVISEEQQKIINEMKEIKKNIDDSITSTKIKKAANFILLLAGVLTALGTILGTIYFFTNHFIGK >gi|343386659|ref|AEM22149.1| endolysin glycoside hydrolase, complement(1745769..1746251) [Brachyspira intermedia PWS/A] MKMFLAQTSHESKNFTVLKESFKYSPKRLLEVFPSKVKTLENAENICSQGWKSIAELVYGNRKDLGNINAGDGYKFIGRGIIQLTGRNNYSKYSKLTGLDLINNPDLLLEKDVASEVACCYYKNRGLIGIRDIKEITKKINGGYNGLHDRIRRFELIKDI >gi|343386660|ref|AEM22150.1| hypothetical protein, complement(1746764..1746961) [Brachyspira intermedia PWS/A] MKTELNQKISKEITDRTNADKNLQNQINSIMSLIPKDIKTNVEFDTGKTLDGKRMYGMYVKKVFL >gi|343386661|ref|AEM22151.1| hypothetical protein, complement(1747003..1747257) [Brachyspira intermedia PWS/A] MKDYSQAFINTNGEEFPNTKAVDAGSPGNTNGTEIIADLLNDNWGFSQSLLKAASISPNGEDETADNSQKLEAIKNFIMMQIRH >gi|343386662|ref|AEM22152.1| putative capsid protein, complement(1747317..1748936) [Brachyspira intermedia PWS/A] MKFKIFGLDININKYNDKPLLINNNSDRLNNPYNYYLTDIVQTIFNGDTFPGSFGITKDYTFVDYYTLRKRSVQLFKENPYARGILRRILRNEINKGLTLEANPLTMYTKMTEEETVLWSQKAELDFNIWAENPKLCDYYNQKTFGQLQLDVRQTALISGDCLVILRISPKTKMPYIQLIDGSHVRTPLGYTPRKGNKILHGIEFDNLGRQVAYYITNNYNDNLLEYKRIPAYGEKSGRRLAWLVYGTDKLLDDCRGEPILSNILYMMKDLDRYKDSEMRAAVINAMLPLFIKKGEKGLGSAPYQHGAIKKTDIIINDKEESRKFNITDNLPGMVLDELKYGEEPVSFNTVRPNVNFGIFQETILNTISWSLEIPPEIVRLYFQNNFSASRQANNEFNVYLQARNYQFSKEFLQPIYNEKVISSILNGKLEAKNLSKAIMENDIETIYSWTNASWSSISRPSVDIQKDVSAAATAIEYGIGSRDFWNKRIVGKSFQEVMRILKKEKDVMDKMGLSFKDIEDSSGKPINNIDNEEYKELE >gi|343386663|ref|AEM22153.1| hypothetical protein, complement(1748960..1749256) [Brachyspira intermedia PWS/A] MSNKLDDDNNISSLSSKEYYKNEYNNLRILLFEYDKAILSVQNHKSYTLNTGQTTQTVTRHNLSELIEAKKDILNQMRELEMHLGIGKPSVIHVNPSW >gi|343386664|ref|AEM22154.1| putative large terminase subunit, complement(1749339..1751252) [Brachyspira intermedia PWS/A] MTYKKEYELPSHYIERVRALDKEISPIPGFYKFSRTPFWREILDNMSPKSPYQKIVVMKGVQIGATTGILENIIAYNIGCDPKPQLYISADKELVKMNMEIKVERMIDSCKLRDRIFSQTGVNTKKTGDTSLQKDYIGGFLIAIGAQNPGKLRSMSFPVILFDELDGMPDKIGKEGDPVSLADNRTNAYASKRKILYISTPLVEQTSKIYKLYKEGDQRKFFVPCIKCKKKQELIFHGITETGHTYGIVFSHNNGEIDYSSVGYKCKYCGHIMKNHDKSIILQEGEWISTSKSKDPKLISYHISALYSAVGMFSWEDIVQKWSKCWDIKNNRLKDKEEYREFRNLMQGLPFEERGEAIRADKVKQNRSYHYLKNQINNKNFIEETGSGILLLTSAVDVQKNGLWVDIRGWCERGISYLIDAFFIEGETENYNSIVWKQLDDIVMNKNWISDDEKIYRINSTFIDSGKYTDYVYEFCKHYSYGVYAIKGNDYIQGGLTYKAFNRDTILKAGLSLALHINTTKQKDFIARTLNLPRETNKLLPDWYINFPNDFADDYFDHYSAENRIDEYDKITNKYIRTRWKLTAGRENHLFDTHCYNLANLEFFAFNICKYELNIEYLNWKDFWEYSKQGYFYDEIK >gi|343386665|ref|AEM22155.1| hypothetical protein, complement(1751293..1752015) [Brachyspira intermedia PWS/A] MKVSSKEFGRLANVSIEALRQAVKNKKLIRDNQYRYDLTNEVNISYLLNKGLTLEDINNFAKSISGHNLENIEKITDKSSQSLKNKGNNEEKETEILDEKKFTDITGLPAYLMNLTIKELVIEYDEPVKLKFWADVLYKLLQAQEREQKIKERDLELIEKDFVMKYIFKYIELLNLRLLDYPDSAVDNLTALIKTNENNVRIKIIEEMTKDFSMILTETKESIKREINKLLNKHLENNNE >gi|343386666|ref|AEM22156.1| hypothetical protein, 1752185..1752775 [Brachyspira intermedia PWS/A] MNISNILNKLQCNTAFAKPLEIVFSEYQFHNYHQLISFITQIALKSENFYFTEESFSSTNKLINSFECMNIKQAEKLSKKGDKSIAAYIKKYGTANDNNKYNYRERGLIRLKGKENYALYGKKLGIDLIQSPYNAKRDYIAARIALEYWFHNKCNEKINNLEELTRTVQGNIYSIDKIIEMINIIKSPNQKGDINA >gi|343386667|ref|AEM22157.1| hypothetical protein, 1752768..1753103 [Brachyspira intermedia PWS/A] MPNKKTSIKELDDYIKAHKDNEKAKAVLDEKKKAAIRYLKNNTDGKIEYNHKNITLVNTNKYAYSSEVTGIQKNIDALIEDRKKQEKIEVLNGTAKVIDVSSYIKMTDKEA >gi|343386668|ref|AEM22158.1| hypothetical protein, complement(1753104..1753799) [Brachyspira intermedia PWS/A] MYEIKVDTSKLKFGFANIKKAAEISIKNTLNTVVFLSRKNALQNINNDFNLRNNFTKRNIQVEKAENTSISNMFSSVGARDKISYMALHEEGGIKKSKTGNNILMAQTAARNGSNSNLVSKELYYNKIKRNIIKYNKGKGSKKSRLIAAAYEAYKKNKFLRYKDNIYKITGFTKAGDKTYFTKEHIYNLSQKEARIEKREWLKPAIEKPIKDFQNIFNSNINKLLKSKHII >gi|343386669|ref|AEM22159.1| hypothetical protein, complement(1753805..1754131) [Brachyspira intermedia PWS/A] MKYLYILFIILSINTLYLEAQLYRRSGIYIDKENRKLIIYNDGSGIFKENGIKSKTFKIGNKMSLQNEYRFIFNFKNKPYSNTHLIFIDDDSIVLIINNYIKYYFEKE >gi|343386670|ref|AEM22160.1| hypothetical protein, complement(1754215..1754880) [Brachyspira intermedia PWS/A] MLENNILSHNNCTNQKIELIDNAIDFIYNRLDEWKLYLYKEEQMQPCSENENNLTSKLVKFLTTYNKVEHNYYFNSEEPQKGQCKIDIACYGIDRKTILVIEAKRLPTPSKKREMEYVTGFENKNGGIQRFKLGIHGENYNISAIIGYVQNKDYKYFYEQINKWILELVKSGKDSTVKWSNDDCIKITVAEDNDKAHYKSNNTRISLENIELHHLFINLCI >gi|343386671|ref|AEM22161.1| hypothetical protein, complement(1754885..1755961) [Brachyspira intermedia PWS/A] MNHYDNNIIYNNDILQYNFSCLSNILGGGRIIYLMKKLYSFPKLKDFLKSKNLESYEGYIIGGENSESQKKKAEWLANYKYISEKQLKNVEFEINSNIFENLNFVKEKKFVRARNEKIYKSPLFLIYEGVNLDCAISKKYDIAYKDRIVGIISNNKNDINLIELANNFYRNKKIMSSSIKILSNYSISQRYVLSKNDVISVPFEKDIEKSLLEWEKDIINDIDYIIDFIKKGNESYIMKKVTSKEDINKYNDTFVRLMLTSFNNFNFLYMFEKNGIIFSVYSFTKNTSFNIINDEKLMNNLVKEIYYKYGTSLYINRIIRIFSNDILIIVKPNKLRYWIKSIAIRDVDDVINDIITQG >gi|343386672|ref|AEM22162.1| hypothetical protein, complement(1756112..1757722) [Brachyspira intermedia PWS/A] MDILELIGFDKNDQNLKSYIINLNEDLSQETDDVKVYAYEARKLSNKINYILLQNNVNSLKPIAYIIDNTYDKLIDTYFEDIKYYLWLNASVPILYIINDTKIDIIFTNKKPTYKGDHFEFINDIIDLKTSINNNKQFEKYSIYRLIDGTFWEDSSNEDKIIEEELSHKILIDKIKDADKYIMNKFKYNKQKHIIGRKLLIVTLLIKYLEDREVLKKEFFYTIGEKYSSYIDILRDQNIESLKKLLLILENKFNGDIFVLDNIKELDLEIINTLYKVIEAKNYKNQWYLWKLYNFKHIPVEVLSSIYQYFANDKLGAIFTPIHLVNLILDEVMPLNEIRGNEKIFDPTCGSGIFLVSAFKRLVLKNIINKNISSPYDSNMLSPEQLKNILVNSIFGIEIQKEAAQLTCFSLALGICDALTPNVIWEKLKFDKLINSNIFNNNFFDSNDEIKNKVKNGFDIIIGNPPFEVDTDNRQKIKKGVICYDIQIKCINEYLSDNGKSLLIQPYGILYNKKLSKRKREILIIFMYLKYMILLL >gi|343386673|ref|AEM22163.1| hypothetical protein, complement(1757779..1759275) [Brachyspira intermedia PWS/A] MFSICCIISNLDGTKEENFCLYLNKEEIIEFFSIFNEYFQIDMDTNELDYPKYIKIGMDNEYIDKIKAFFEKYSIYFVFRFIIEKMKKMKEERIVVMGFDIERTNYITKSQLIDMDNSYKNFENIIKKNVTDILKSKKRFRKCYHEIDKAKCSNDMTSAHSISKSSSLRKISENNFLYNFETNFYKFFDDNNKDPSCILQPKKIGVNEASTFYGFCRYHDNILFKDIDEEDVEINEKNAFLLGYRGFIKEYYNKEWSIEFQKNLISDISNVITTPFIGECKSATIPNYLKEFITKEYGNIDSYIKNVFYKNLLNDNTFLKELEKGAEDCKKMRDRYFQVFINKNYDSIKYLVFTFSNIPDILFSGAAPILYDFDGNCLQNDINNLENIAINSIYYKNGGAVIFQWFADDKINPKFIDSIIKTYKKEKNNICNIIIQLVFSYIENIFMRISWWDKLEKKLKEELSNRNLDTIYNKPYKSLIPNGNQYCNWGNVNIIKGF >gi|343386674|ref|AEM22164.1| hypothetical protein, complement(1759313..1759657) [Brachyspira intermedia PWS/A] MKLTKRNKNEYLKDIDTKRYYDINCTLQNLSSEINKIRLEKNITQKELANRAGITQQQLSKVELGANCNMSTFISVALALGATIGLVGINVINNKQDNKVSFNDKNFVYKNTNI >gi|343386675|ref|AEM22165.1| hypothetical protein, complement(1759686..1760060) [Brachyspira intermedia PWS/A] MKTDKFEKSMSKIEDIEFKTAIEALLDQLELYGKELKEPKCKHLENNIWELKLYNKNHKSRILFFYAFDENNVNDEYAIMVILIKKQKNNYSKEIKYVKKIMKIFYLTYKTKEELAKEWVKKLA >gi|343386676|ref|AEM22166.1| integrase domain protein SAM domain protein, complement(1760263..1761192) [Brachyspira intermedia PWS/A] MASKKNKELIFQGNNNIITEQQAAILVKQANYLNILDYMKEEQLIKQIDYETEKENFFKQCSKTKSNHTKRQYKNGLNKLEEYCRMNNKNILFIKAREADDFITEVNSSELSNLSIRALVSSCSSFFSFLERRYPFIKNPFRGTKTRPPVKNKKRLEVPTKKEIELIIKDISDPLIKVAIIFIMECGVRVGALPKLEIRNNKYYSYSKGKEISWKVTDKVIKLLKQNNLSFNNPFKNKSSEVIRNIFYRSSKRLYNQGKIKAAYSIHDVRHYFAVTLYKQTKDIELIRQALNHSSIAITGIYLKSLEVE >gi|343386677|ref|AEM22167.1| hypothetical protein, complement(1761471..1761752) [Brachyspira intermedia PWS/A] MIEDIINSYNIDRDLTDIDVLLELLIKLENLGVEEVFVNNEYFNEPKQIISIHKKRAVSSAVYLSILDMSFNESVNLIKGEKEKNNIDYVYRI >gi|343386678|ref|AEM22168.1| hypothetical protein, complement(1761764..1761991) [Brachyspira intermedia PWS/A] MNITKLIDSLQSYKNKGCNRVLISNDHFTLNQYIKKIELDKNNSKQINFIIDEVFICDAINIAKIHKDNNETITI >gi|343386679|ref|AEM22169.1| single-strand binding protein, complement(1762031..1762153) [Brachyspira intermedia PWS/A] MQDKNTNSTRSKVRIIMQSMQMLADKKESNNTAENNNQER >gi|343386680|ref|AEM22170.1| conserved hypothetical protein, complement(1762739..1762879) [Brachyspira intermedia PWS/A] MIKAIINYNDINDEFRRMNDILGVLQYKYKNIDVSYNKVKNKMNYL >gi|343386681|ref|AEM22171.1| conserved hypothetical protein, complement(1762898..1763629) [Brachyspira intermedia PWS/A] MKKLKSSKYKNLYDILQSVSYKHTIAKVFYDFIAMTALNISIGISLNPEEIKNRIEQLKKISDHYDKNEMELFNTFKLEIANEYQNNRYQDVLGTLFQELNLTNEYKGQFFTPYELSYCMNKITFDKSLLKERDFIHCYEPAVGSGGFVIASCQIAEELGYNYAEKLIWTVNDVDLMCVYMSFIQLNLIGAAALIQHCNTLSMKVFDRFYTLGYILNRCSQRLQIEEHCNKMLKIIKDVQKIS >gi|343386682|ref|AEM22172.1| hypothetical protein, complement(1763639..1764046) [Brachyspira intermedia PWS/A] MRQHACGDRSRELENKITKGRKLSELTLEELKELKEITMLDNYDDCPPAAREDIQKEIDKRKNKTIGTTFEEQIKSNNEIIDFSEDENNSNYRIDEENEEDPLSSGVDEDNINRWDFDSDGDKVDSEGNKMLFAD >gi|343386683|ref|AEM22173.1| hypothetical protein, complement(1764349..1764519) [Brachyspira intermedia PWS/A] MRELNFIEDNGLFGITFKSDDKAEANTVMNAIQRFISKISNKETKENIDFSICPTG >gi|343386684|ref|AEM22174.1| hypothetical protein, complement(1764570..1764998) [Brachyspira intermedia PWS/A] MRNTEIAIFWDGNITKDIELFESLGLIKIIDNYSKGIYEKDLYVKVGEYKAKDVYIEEELKEKLEIKDCGYARSCYKWQNVQLFNWIIFSDIYIFNGAIEDTEKAKAKVVSHQSYIENYRMKKVDLTKPLDLFHKLEESELN >gi|343386685|ref|AEM22175.1| AAA ATPase, complement(1765033..1765827) [Brachyspira intermedia PWS/A] MEELKETARDGKDPNCTKCDEYRFVKSPDDLSFSGRSYKLPTMCDCVSDEKSKISEKIERIESIIKTYNLLFGTLDNEMTLDLFAERFNQTELINSIKKYLNVGSTMSLYFRGKSGTGKTTMLKMLWQIYAINNIKVMYMKASHFEDLHKNLFNQNAKDKDMKATIDKKIDNAKNADIIMIDDIDSVGFHYAIDGYYKIFDNIRSGEKTVILTSNKSYDDLLKGLNKKTDAEYIKGRLTSRLLNLKVVDIEMQKFKIKSNKLAS >gi|343386686|ref|AEM22176.1| hypothetical protein, complement(1765859..1766767) [Brachyspira intermedia PWS/A] MAELEKFSALYGKIDYPADLLAIPFEIMEYRNRLGLSLSEFEFICWIFHLTNKNIQYIKDKYITNKKTNFTRQRKSLKAKGYLKIKIATEYKDKKVIRKALVYDFTSLKNKIEELKEEDKKLQNLEAPVTVIYDEPSLFNEDVEENPIYPVKLLTDDKEIKELQLQCDFLEKFKKLYEELLLEKLDYSTRAPYKMHLIKIFKNRVNNNIDDVLEITKNAFYKLPVEKRYAMKLQDLLKMALCQKNESTKNNDNKENKTQSEETQETKKISIPSGIDKLNYLLKIIEEGGNFDEAYSQIANCG >gi|343386687|ref|AEM22177.1| hypothetical protein, complement(1767330..1768202) [Brachyspira intermedia PWS/A] MKDNNKIFDYMTEDDNIKRVKIFHSIRGNAQNFGEMPPIDLQIDLDKEYKEYKNEKENKIDNVIKKLKNIILSKFKEKNITKDYPIVLYAIAPNSILVSIAYILEKYGYNFVFLPKPKDSLSWGFKDIEIDEPELKSFVESKSNVMRIDNINHPIGIILSGQSNINDIEQVYKDDKNLILNKGFDYSYSNIITITHQVILEEHSHKSLVNKRCYYLFTKKIDEIFDDIVKYRNLEEVHILSSIPANGLLYVGQKMADYKYDYLTFYIYNYSSDNNRYELGAILNSNLLEY >gi|343386688|ref|AEM22178.1| O-sialoglycoprotein endopeptidase, 1768336..1769334 [Brachyspira intermedia PWS/A] MKILGIDTSCDDTSAAIVEDGKNVLSSVLSSSIDAHKEFQGVVPEIAARKHLEAILYVIDKALKDANTTLDDIDLFAVTNRPGLLGSLLVGVASAKSLAFSLNKPLLALDHIAAHIYSPHLTNDIEFPYIALVVSGGHTIITEVHDYGEYKVVGTTLDDAVGEAYDKVSKFLNLGYPGGPIIDRLAKEGNKEAIKYPIVLLNGIDEFNFSYSGLKTACVYSTKKYLKEGYEATNENIAAAFQISAIEPLYIKTLKYAEKSGIKRVTLSGGVACNSYLRDRFGNSKDFECYLPALKYTTDNAAMVAGLAYHMKDKQDFADYNLDCFSRVLNKK >gi|343386689|ref|AEM22179.1| adenylosuccinate lyase, complement(1770050..1771342) [Brachyspira intermedia PWS/A] MIKRYTRKEMGELWSLQNEFQVMLDVEIAACEAMAEIGEIPAEAVKNIKEKATFTVERIAEIEKETNHDIISFVTAVQENVGEGGQYIHKGLTSSDVKDTALAVMMKRSAEIILDDLKRLSEVLLRRAKEHKYTPCIGRTHGIHAEPMTLGLKFILWYDENERNIKRVEEAKKQVSVGKLSGAVGTYSNIDPRIEEIVCKKLGIEADKVSTQIIQRDRHAQYLTTLAIVASSLEKFATEIRNLQRTDIREAEEYFSEKQKGSSAMPHKRNPITCERISGLARIVRGNALASMEDITLWHERDISHSSVERVILPDSTIAVDYAINKFIDIVDKLLIYPEAMKANIEKTGGLIFSQRILISLVNKGIDRDNAYRWVQRNAMKRWLNNEDFRENVHKDEDITKYLSSQEIDDCFDYAYYLRNIDVIMKRFGI >gi|343386690|ref|AEM22180.1| L-allo-threonine aldolase, 1771489..1772511 [Brachyspira intermedia PWS/A] MEIYDLRSDTITKPSEEMRKAIYNAECGDDVYMEDPTVNKLQEMAADITGKEKAIFVSSGTMGNLIPMMILGRKTRQVLLEEESHIIHYELGGVSSLAGIIPLPVKAERGILTKDIIKNYLNEQPYYMSSVNIVEVENTHNRHGGSVYPIEVLKELHDFTKSKNVHLHMDGARIFNASIANKVSVKEIASNTDSITFCLSKGLGSPMGAMICSNKDFIDEAFRIRKLIGGGMRQIGLMAAAGIYALENNIPSLEEDHQKAKKIANAIIESGIGTLNLANVETNIVIADTKKLSSEILSKLSEKGIKASSFGDYKIRFVTHRDISMDKVDKVCEIIKGLKI >gi|343386691|ref|AEM22181.1| methyl-accepting chemotaxis sensory transducer, complement(1772635..1774452) [Brachyspira intermedia PWS/A] MKNKLMIKFLAPFIIFLLLLFVVIYIFYKPLYKSRFLREKNLQALEAKTRTEGYVEELKNTIYVMDAYLSSNPNWEEFGNFITNVQKLNEGYLNVYFGNSTPYPQGGVFMNTLEVYPRTYDQTSRDWYKDSVATNNIMISDPYIDFAVNKLTITFGKAVYTNGSLKGVCAIDFANINTITESLKKNFEDEIYIVSDKGIFMTHDNKDYILDETNNLFTYPIFADFKNNLSSHIGDLDIIGNEWYSIKKTDNAPWILVFKGSADIFYSQFRFLMLSFFLCIFLLIVLEFLLVARIVIPLSNNLYHAITIMTLMQDGRFDSQFEERDLKRKDVSGTLANSINDMQHIMYTIVSELKDNISLINDSSEKISRGIDNLSDRTSSQAAAVEEITSSIENLLTAISSTSKNSYNAKNMSSKVTESTQNGVAAVNEISHNMIEISESSKEISNITKLIQSIAFQTNILALNAAVEAARAGDQGRGFAVVASEIRSLAQNVNEAAGNITSIIENTVSKIEVGDESVRKSLDILVEIENSAKEVADILIHIYEATSEEEESVKQINTAMNELNKITQENAELVNDSSLLGKDVVNGTTNLSSELEYFKLDKNFK >gi|343386692|ref|AEM22182.1| methyltransferase, complement(1774548..1775444) [Brachyspira intermedia PWS/A] MICEVCGSNNYTEIGIIKNIWKNDKKVYQCSNCRLYFIDQPTDEEIYLLYKNEYHNNIKNKLFEKAKSKMRYARSLSQFNFLNKYIECKNKKVCEIGAFDGLLLSIFKKYGCDVYGYELNDNARDYAKAKYNIDLEPNFLESEEKYDIIMLSHVIEHFKNPFEILLKIKNMLKPNGYLYIEVPNSPMKDQCSYDMLMRYLSTEHIVNFNKDNLIKFIEKSGLNIIECNYSNYKVPVNNELLRANILEGSLPNMNNMFSFSIFALKMLISPKSIFIDYSDNNNIWSYGENIRVISNLKN >gi|343386693|ref|AEM22183.1| putative transcription elongation factor NusA, complement(1775468..1776958) [Brachyspira intermedia PWS/A] MFENVGTYLQLVSDEKDISVDLLKEVIASTMELALKKKYGDDIKFHIHFDNKNNPTVYKGASVVEEVRNKNKEISLEEAKKLDQDINLGDEVLILVDQVEAFGRIESTVARTAFFQKISELEKNLIYNEFKRRENQLVNGYFQREHRGTIYINLGKTEGELQKKDQSPREHYTVGDRIRAYIYKVQGGKDEKGKEVHTKILLTRTKPDFIKKLFELEIPEIADGTIEIKNVVRQPGLKIKVAVASNKPEVDPIGACIGQKGIRIQSIIKEIEGEKIDVVKWSKDIREYIAEAITPAKPIRIIITDPEKKEAMIIIPDEQLSLALGKSGYNVKLASQLTGYYFDIKTETDIKENPELLKDIVPLNQIFSDTTEEVQAADEELETAEVFESNLYSLQGIDEAIIKTLIDNNINSIEELYNMSVEDIMEKTNLEKDVVDNLMLVMKDVVEVVEASDDEYETTSEEVVEEIEVYECPNCGSSITEDMTKCPKCGIELSFE >gi|343386694|ref|AEM22184.1| hypothetical protein, complement(1777032..1777643) [Brachyspira intermedia PWS/A] MAAKTDTLFLYYRKIIKNSICMNNNKTKPQKQKEYGREPKRKKLKNKEKLNKKIDNNIIDEALLFNGIKDVLEENNIYLLDLKVRAISDNKKVYAVIFKKKESVSHTHCIETTRKIQDCIKANGYDEGDYTITVSSAGFRWKFNDRYELFEDMPIKIKYRSGEEFITAYAMLKKSEDDCIIISITDENNVINEKNIKILKKIL >gi|343386695|ref|AEM22185.1| cardiolipin synthase, 1777866..1779353 [Brachyspira intermedia PWS/A] MVSIAIKMLLENRPPYSFIAWLTVLVFLPYIGVIFYIFLGMDWKKSKKKISAKLPEDMIKNYFSSLLKEQIKILDNMQGNYGKHINLVKLAIKSGYSPITVQNEVYVFDEGDKLFDAIIQDLKLAEKTIHMEYFIWRSDKLGNRIKDVLINKAKQGVEIRLIFDGVGSLKRISRKYRKELKANGIKFLYYHDPFSILWTRFVNYRNHRKIVVVDGVVAYMGGMNMGQEYIDGGKRFNSWKDVHMRIVGDSCNLIQNVFVCDWYNAGGRDLEIFNIEENKHKHFKKIKYVNKELNEEKVSIIRKDLFPQSFTDKFLPVQIITSGADSKWDSIQKVYSKMIEEAKESIYIESPYFVPDDGFLRTLENAALSEVNVNLMITGNPDKLVAWWVAQTYFETLLNAGVNIYLYEKGFLHSKFCVMDGRIVSCGTCNMDIRSFYLHYEMNAVIYDIDIAKKFEDIFKKDMLDSHKITIEEYSKQPMLVRLRNSACRIIAPVL >gi|343386696|ref|AEM22186.1| hypothetical protein, 1779384..1780337 [Brachyspira intermedia PWS/A] MMKKIKISELDNQALFDLGLSKERYILFVDDIGIKKDNIPTLNELLRTREDFFINISSEKDESNKNYISGNDLLTALSEIRNLIYHASLKYPLKNISIFARLINLRSLHLYGDLPKDMELKPLDNIENLESVYIENGLTLRQDVYLSMRSTIREIGAGTFRMESFDKNPNLKKIAILTGVSHEEEMPKKLPELEELYIEKGKNIRSFNFISEMKTLKTLELNNIPTLKEIPDLSNLEDLKKVILTNLRNLENMDAILNHPRIRILILENIKCFNIDMLSKETAPRLKYVSVISDDKNWDKRTKKLLEEKGYKDYNED >gi|343386697|ref|AEM22187.1| carbon-nitrogen hydrolase family protein, 1780327..1781118 [Brachyspira intermedia PWS/A] MKISAFEFDIQKDKYKNLDIINNHLKNISDKEKSDLIVLPELSSNGYLFENREELINTAEDIKDGIFINSLSEMSKKYDISIIAGFAEKFENKIYNSAAIIEKGNIKGIYRKIHLSDFEKKFFDIGEINNADLVFNINGINISVQICFDLWFNEISRKQILNGSNLICVLANFGSNTTFEIARIRAIENLTPLVLCNRIGIEKNSIMEASFIGKSFICDETGKLLTDIDNNQNNKIINAEIEIKNKRQNIICSDFMKEIKRHY >gi|343386698|ref|AEM22188.1| methyl-accepting chemotaxis protein McpB, complement(1781186..1783054) [Brachyspira intermedia PWS/A] MGVLFMKFMQTLKFKMPFTIISSVAIMLLVLMIVIISASAIFMERTAISGFMETADGYRDLVSIWIEDQSDLTSVISKESEFLDYFENPNQYTLSIASGEFTELLKELESHFSAFALIDLNGRVVLDTASNEHLNTVSQKTIWKELQNNNYKYAIEDEIYLSSVTGNYVIGVLAGVFDTNARPAGVLYAELRWDSFVQKYFSEITIGKTGNIYIVNEEGRRVAHKEVKKVNTISIGSKNALSAAASQRKGALHYEDEGKKIMAFSRLENIDWIMCVTMLDSEFFANKNTLIKITIVLSLLLLIVTSFIVIVYVNKNISRVLSRIASDLNRLGNGDLTVSAPSKFLTNKYQNHEFGIIANGFNNTIEKLKNIVSNIIDSSNNIELTSKELASGNNDLALRTQSQSSSLEQTASSMEQMASTIKNSAEKSVIGNNMMNDSKKSVEEAGLIIDSTTRSMEDVYEASRKITNITKLIEDIAFQTNILALNASVEAARAGEQGRGFSVVASEVRTLAQNTQTSVKDITSLIADSDEKIRVATEAARKSQEIFVDIKDKIENTANIMRDISTTAVEQQSGVDQVNQAVLKMDASTQENASLVEQSKEASITLSSEAQKLIDVVSYFKL >gi|343386699|ref|AEM22189.1| galactokinase, 1783292..1784575 [Brachyspira intermedia PWS/A] MYNISQLKDFLKEKKMDEKFSSIYGGDAYSISEAYNRLSDTIKHFESIEKTQEIYVFSASGRTELSGNHTDHNNGCVLTASINLDKLAVVAKRDDNKIVVYTDYSNTPDIIDINDLNINKDEYGKSNALTRGVCAGIKNKGYNIGGCTVTLNNKVLIGSGLSSSASFESLIGEIQNALYNEDKISKVDIAKIGQYAENVYFGKPCGLMDQMGCSVGGIMSIDFKDNDNPIIEKVEYDFESKGYALMIVDAKGDHSGLTNEYAAIREEMNAVANYFGKKVCREITKKELIDNASKLRAEVGDRAIMRAYHFLEENERVINQINALKKDDINTYIKLMNESGLSSFMYLQNCYSVTSSKNMGVALGLTLTKDFLKGEGACRVHGGGFAGTIQALIPVNKVEEYKKYMNSIFGEGSAVKIRVRQSPVCEI >gi|343386700|ref|AEM22190.1| Multimeric flavodoxin WrbA, complement(1784666..1785361) [Brachyspira intermedia PWS/A] MKITVIHGQNHKGSTYNVAKMLYDRLGGEVTEFFLPRDFNSFCVGCNNCFIKSETLCPHYDKLKPITDAMDDADIIILASPVYVYHVTGAMKAFLDHYGYRWIVHRPNESMFKKQVVCISTAAGGGMKNTCKDMADSTFFWGVAKTYSYGFAVREVTWNNVKDEIKDSIARKMDLAAEKIKREYGKVKPSIKTKIFFKIIKSLHKKKNFTENDFNYWNERGWLKNTVPWKN >gi|343386701|ref|AEM22191.1| Predicted polymerase, complement(1785383..1787119) [Brachyspira intermedia PWS/A] MAKEVTTQTLSIDPNNYEFYYDNLVNTREIYDQIVDVDSNDQNLYEELLKNYVRPGDAVLKSISKREGVKASKNVKFDKMTGLYKSTVYGYVFYDELKSVSVIPVINVADKWRGVMVLPPQKRQKKQLVLEEIQTIISQIPIKLMVNYDKITELVEYNLKYDEGVMCVFVEGRKPIDGNVQKVILDYDFTLDSGKESETGAIDFKERGFIHNIEAGVQIAHFMEEKPSIDGLDIYDVLMEAHHDDDPCYKLGKNVVVDSDGITIRSGIRGILSNHNNTLSVSTVAEIDKVDLSTGNIEVNGSLIIKDNVAPGFSIKTEGDIYVHGNIEDAYIECAGNLIVSGGIIGGPNSTIHVNGKMYSQFIRNANIICKGDLLSQQLVNAEIAGNDRVIVLEGKGVIIGGNVKALNGVWAKSIGSMSESKTTITVGRDAEADAEFKNIVSTVKTNKEEMSKIKSLLGTEYFKNPKAFIQRIPPNKREGIKDILRRITNLVRETAQLEARRDEMSAEFEKLSHSSITSMEGFFPGVTIYISSMRKYISKKISGTEYFYSKELRDISEKAPKLLPLEEYDFPREIKRD >gi|343386702|ref|AEM22192.1| Methyltransferase, complement(1787150..1787953) [Brachyspira intermedia PWS/A] MENKECEFCGSTKSEVYIKTDLVSYNKCLNCGLIYQYPVLSQEEINDIYSDNYFEYEVANQENFFGLMKLAMKDIGFDKIESELPNKNVLDIGCATGMMLNYLKTKGYNAQGIEICSSSAEYARKNYGITVHEKPLLDVGFESDYFSFIHFSHVIEHVPNPADTLKEIYRILAKGGYLAITTPNADGMFAKKYGGAWRAVMPQHLWLFSKTTLSKYMKSIGFNIISDFSWGSIPIEKKPNKIIKTFFDKYVKLFNRGDVMLFLCKKV >gi|343386703|ref|AEM22193.1| PASTA domain containing protein, complement(1788032..1788658) [Brachyspira intermedia PWS/A] MAKVKEFFNKIISFIKKIIYKILPDGIISDPKSFLVFRRLILFAVLLFVLQGIVVTLIVFIVVKSGGESFELPDVQGKEIFEAFNLLEKEGMNLNVQTHYFNNYPLGTIVSQEPKGGVKVKRGRTVYLVVNVAEQALVKMPDVTGMKYDKALSIISNDVLNTMTNVNILPKVTITDDMYENDVVLSQIPAADEVVGVNTEIILTVNNK >gi|343386704|ref|AEM22194.1| methionyl-tRNA formyltransferase, complement(1788681..1789559) [Brachyspira intermedia PWS/A] MELDNVNLNGVIAPIDTKKDRKGNIINSPVVEIALEKHLNLFQPESINKDDFYNILLDLSPDFLIVVAYGKILNKRTLSLPKIMPLNIHGSLLPVLRGASPVEHALLYGFEKSGTTLQKMDMKLDEGDIILQHEVNIDKDWKFNDLYDKIKESGVYLLKEFFKDTNKHISNMIKQDDALATYCSKIKKEDGKLDFSKDALSLHNMTRAFVRWPTAYCFYKDVSIKVFNSEYICKLDNNTDFGKIVDINNNGIYINALNGIYVIKELQREGKKRQTVKEFLCGNKLVVGEYFN >gi|343386705|ref|AEM22195.1| hypothetical protein, complement(1789683..1791119) [Brachyspira intermedia PWS/A] MNKYYEINLDKLIELKEMISKENIELTCVNPKGISIIVPGNCLDILLQEKDNVLLKDSKYYISSFSNKFFNLNNPQTNKNNVVEGSDDNKFNEYEYFYHIYKNCISKNEKLKSANDTLLTRMLKEKPSNRLYLLKPYLDQLKLEAKTPKVTPEIAPNIERLLTGMGIVGRLDFIRHLKYIKSAGKNRNDTVGTETEIMISSIMNAIVTYLEKEYFYRDIFDNLDMLDDSNILSHSNRVCILMIEFLYYYNNIFNKGLSSKLRQDYKSLYFEKYKTILSRFNLVKSIDKLENVYRLGIRKFTGSEIVSYAIGAFYHDIAMLNMIDFVPTDDFIKDGDFKDFHTAKAYYFLKYVLNQREESCLSVGLHHECYGYGSGILKNFFDKKINDPKHKVDFLMSFEPEDIINAECFAYFPAKMLEVVDIYDTLTFMEGSRNKNPEEVVFFMKKMFTENKIAVDPIVLDLFIQFLSNVKGVDIIEG >gi|343386706|ref|AEM22196.1| hypothetical protein, complement(1791168..1791782) [Brachyspira intermedia PWS/A] MKKIILLFVFIFSISLYPKIGMKESTIVEKKDYGYIVYAEDYYRLYALPSYYAEYDLLRNVDYLERALDAPFDFVNRALTIIETEEAYTRYKDLMHMQFNYLITQNYIYLAGLYDKKNYYFYNSQFDEDIKKSFEYAVFFYNLAKERWAVTKELAEKVMKNKAKLEMDNLIDKAYKIALGEIDYNKTADRQLKHIDEILQEMEN >gi|343386707|ref|AEM22197.1| ankyrin repeat-containing protein, complement(1791848..1793785) [Brachyspira intermedia PWS/A] MENLDNNNNLDNSNENNNLINNNQNNSNNNINSNIQRIDKAKEAEENKKYIFKVAVVACAIVFVLLVGAGILVGLFLFVKSKSDMEKMVINYEIYSEEIYKKKYGDSIVKEMVNNNGADVNETGDNNQSPLFYAVQNNNIKAVEFLIENKADAEIANDSGITPLILAISNNNTKIAELLIKEGKANVYGSYTGNDIAKYPMYYAVAQTNKTMIELLLKNSFDLKREPSLLSYAIANSDESIVRYLIDNGADINYKNADGTTVLYNAVLSLNPALVDYFVSKGAKIEDAGESDMYGNIIMAAAGSKFNNTSSSPVDLVLVQQKSADSAKVMGKIITNINKNTLNRLINGKNALIIAAGNSYIDTVKVLLTNGADVNSADNDGWTSLMYAANNGDIELAKVLIENKANVNAKSYEEKTPLLYAMNSPIESSRNDMINLLIENKANINVEDSNGLSPLTVAVMNNDVELTKLLIANKANLSVVTKDGESLIEYAINNDNVDLLQILVEAGADINYAGISSYTPLMIAAKSGAENIARILLTQKVDINAVDKYGDTALHIASEYSKLPIVRMLLEKKPNLNIQDQNGDTPLHKAVNSGSVDIVSELVLSGADVMVRNNRGNYPIDIARDNNNSAIFEILKEAEEKQNNN >gi|343386708|ref|AEM22198.1| solute binding protein-like protein, complement(1793878..1796484) [Brachyspira intermedia PWS/A] MKLNNKILYKFPILILFIILLSCSNSQEEIEQKEIDRGGALIDKIIYEVRTDMTIAIKDVADGRADLMASGIDGSTYLSLGETDLEKLDTYAVPSGSWSLLFNPVPNKAPYTVTTRDGKTHFNPLAIKEVRFAMNFLIDRKKLVDEILRGAGQPSFTQATPGQPGTYRYNLIPSKMGMTENGNQEKALNDINKAMEKAANLPENRGKLVKENGWWKYNGEVVTIKFVIRVDDPTGRLPAGNAISDLIEKTGIKVEKLLYDRNKSTQVVYGSDPKDYEWNIITEAWGAGATRAWWDVTLRQMYVREGNYMPGGNVAEFWNYDNKEASRISDKNSNGWFLTADEYWTGNMRLQEIGLQDAVRIYLNSQTQFFVANKERFNRRMLYGVGDGINDWSIRSADIKPNRNGEKVLRVLQHSAQGSLFISPWDPVGVGGFSDAYSAIMIGPCSDAGASFESPSTAKTEFILGEADTNSLEIEVRAGNNGIPVGTVKVPQNAKMYNPYTQKWEEGLTVKVNDKGELVYTKSDNLTAYVKCDFKPRSFKWHHGIDSSLVDLMYGSVFIANIITKTNENDKYYDSAMAGRYLSAMDGAVGSVINEDGSFTVYGNYYWPMDMNRQIGIASVGPKIGNPNRNTVIPFEINEAIMKIVLEGSKSGNVYTISQDQSLTSIDVKNPTCVSDIKEKLIEMRDSQYIPAGIEDFITKEEAVKRYQAAIDFIDKYGHAYISNGPFFISRIDSKANYIELSAFKDYGYTAEYWIEKLSTKMSRIEDIDMPAIANRNNDMNINIYVSSYNYPDNALEMPDPNTTVKVLLQLPNGGEREYNAVLENDVFKLTISKEELASLPRGNYIVVIESYIADETPYIETRNFVLQ >gi|343386709|ref|AEM22199.1| ribonucleoside-diphosphate reductase, beta subunit, 1796768..1797838 [Brachyspira intermedia PWS/A] MKVIDIEKKPENEKIFFGDFGHYLRIDSVSHEVARKLKEASEGNTWFSKEVDYKSDKTRFSSLPEDAQRAFKLNIAYQTLMDSGVTSGFSSILNRIVTSSIWSILYARIAIEENIHAESYSYGLSEVFGHEATDTLDLVYNDEFVKHRMEKEVELFGNVDELCNLENSTATLDEKKQAVLKLLMGIYLLESVKFPFSFLVTFTINNNYDNAIAGFTKTIKLIAHDELNTHVPTGKNVMNILRKENDQGFTHLFKSGWFNDMAKAMTEFTVNEEIKWAKYLFDGYEVAGINSSVSEHFIKYWAGVRLRDLGVESQYNEKKSDIIDWFNSYRDINKQNAALQETTNTSYQKGALKNDL >gi|343386710|ref|AEM22200.1| ribonucleotide-diphosphate reductase alpha subunit, 1797885..1800206 [Brachyspira intermedia PWS/A] MIELTKDKKHIIIKRDGREEPFNEEKLRKVIDWATEGKEAFTNQLLEGLNIKINDKMKIEVLYDELINTAVNMISPLYPMYDTIAEKLYLMKIYKETCGLKKIGSYPHIKNFLKKGIKYKIYDKDIIQLFTDKELDKINSMIDPNRDLLFTYKGLAIFYKKYCKNIGNKKLELPQITYMVAAMFSFYDDYYKGENKDKLEISKSERLKYIKRTYDMLSRHEITFATPRIANSMTIKAQLASCILNTPADDTWSLNQTDGNMALYSKFSGGIAYDASYIRAAGSTIQTNRGRSDGPIPFIKRVEQTISSFNQGGVRKGACVITFPWWHLDVLDLIMLKDAGGTEDTRARKLVYSIRISNIFRERVNKDGYVTLFDPKETPLLNEEYGKNFDVAYMYYESKSSIRKKKIKAKDLLFQILKVRQETGNLYLTFVDNINEQNMVNKFVGASNLCQEIVIPSYPSKLIKEKYVINEDGEYEIIQRKKSGEIGICNLVSVNLMSWVNFSPEKKKSFCYTLLRGCDNIIDTQFYPVKEGEIANKKNRPIGIGVINYANLLASNKIKYTDKEALEFTNKVFDDLYYHIYEASNILARERGPYKTFNESKWKEGLTPFHISLLNNNKKNNLNVSVDKEKWDKLAENIKNNGVRFSFHGAIAPTATSGKSVSATESIEPIVDLFFIEEGIQTLPSLVPNIKKNREYYERCWNIPAKTIIELAAVRQRYIDQSQSLNLYYVKPDSAKELWDDIQYAMDLGLKTLYYMKTPKSNFELEEVCESCT >gi|343386711|ref|AEM22201.1| phosphate ABC transporter, phosphate-binding protein, 1800462..1801169 [Brachyspira intermedia PWS/A] MLILISCGGGASSATDIVITGSSSVSPLMFKLAAKFEELNPDYTVTVETSDSTIGVQDTINGNNNIGMASRNLKEDELTGLDTYLLCQDGIVIIANKDSEITQISEEELYNLYMNNTAIGNITKSISREDGSGTRSAFTDLTSVGKENPLPSTVEILDGTGKVKTSVMSDASKIGYISLGSIDDTIKPLAYKAKGQNEYVSASVENIQSDTYKLYRPFYIFTKKELNLMKGLRLS >gi|343386712|ref|AEM22202.1| putative phosphate ABC transporter, permease, 1801347..1803152 [Brachyspira intermedia PWS/A] MNNNINKHIRNEIIDNIMKYVFFICSIFSVIVVFSICIFIFIYSLPIFKETGFLKFVFGMDWSPSSKHFGIFPMIVGSVYITILSTLLGGGFGFFTAVYISMFAPNKLKVILSQVIDLLAGIPSIVYGFFGMSVLVPFLKKISPNDIGEGVLASSIILAVMILPTITSITKYNLEAVYKYYYDGARALGNTHSQAVFGVIVKAAKSGIFSAIVLGMGRAIGETMAVMMVAGNAPFIPQDLFSYFRTMTINIALEMGYATGIHRSALIGTAFVLLLFILIINIILSLLKRNNLYFSFSFTSLFKKNKELKTDINNFSFKNYEMKMQTIKGDMLKYISIFATAVSTLFLIFIVVFILVRGLPHITLNLLFGKSNNSQMTLLPAIVSTSMMLFMSLIIAIPLGVFAAIYLTEYSKAKSKLISLIRIFTDSLSGIPSIVFGLFGMLVFANLLGIGRSILAGSLTLVLIILPSIIRQTEETLMSIPASLREGSLALGASKVRTIFQIVLPCGFSGIMTSVILSIGRIVGESAALIYTAGAVRYMPKGYLSSGSSFSVMMWMFSSEGLYINQTFATASILLIMIIVLNALLFFVNKKLKRIINFKTI >gi|343386713|ref|AEM22203.1| Phosphate ABC transporter, ATP-binding protein, 1803166..1803963 [Brachyspira intermedia PWS/A] MNNEINNELNFDFDTDKIIKVKDLDLYYESFQALKKINIDIDKNSVTAFIGPSGCGKSTLLKTFNRMNDLVPKCRVEGNIEIAGVDIYNKHINVSYLRKNVGMVFQKSNLFAMSVYDNIAYGPRTFGIKKKSQLDEIVEYSLTKAAIWDDIKDRLNKNALGLSGGQQQRLCIARALSVNPKILLMDEPTSALDPISTGKIEDLINELKNEYTIVIVTHNMQQAMRVSDKTAFFLFGEIVEYTDTEEIFSKPKDERTEKYITGRFG >gi|343386714|ref|AEM22204.1| phosphate uptake regulator, PhoU, 1804035..1804691 [Brachyspira intermedia PWS/A] MEIKMKKFEEELNKLIEHVTEAGDMILEALRNSTKALTNGDIELANQVIENDRNINRMSYKIESSSLKMLLLEHPVATDLRIVSSALKIATDLERIGDQAKDICDLLRFLLEGNIYKKNLDIIIEMSNIIEYMITNCLNAFKEKNAELSKNVIAKDDEVDKLFYKMRDSMVELIKSGAENADQAIYLMMIAKYFEKMGDHAENIAKWVYYYSTGERFK >gi|343386715|ref|AEM22205.1| ABC transporter related protein, complement(1804773..1805561) [Brachyspira intermedia PWS/A] MLELKEVYKTFNRGTITEKKAIKGVNLKLNDGDFVTVIGGNGAGKSTLLNLIAGVYEVDYGTISVDGVDITDKKEYARAGLFGRVFQDPMVGTASNMGIEENLALAKRKGKRRTLRWGITKAEREEYVEKLKRLDLGLETRLQSKVGLLSGGQRQALTLLMATLKKPRLLLLDEHTAALDPKTAKRVLDLTEEIIREDKLTAFMVTHNIKDAIHYGNRLIMMNDGNIIYDVSGEEKKSLEIADLLKKFETADGSLSDKLLLS >gi|343386716|ref|AEM22206.1| hypothetical protein, complement(1805577..1806482) [Brachyspira intermedia PWS/A] MEGIFLAIEGAASQGIIWGIMTLGVYITFKVLDFPDLTVDGSFALGGAVSAILISNGMNPFITLFFAFLAGSLAGFVTGFLNTKLQIPGILAGILTMIALYSINIRVMGNRPNIPLLGMDTSLTIIQNMLSLSKVLSDLLVGFIFSVIIIALMYWFFGTEMGCAIRATGNNERMIRALGVDTNVMKIIGLMISNALVALSGALVTQSQGYADVGMGTGTIVIGLASVIIGEVVFGNRFSFWYKLASVVMGSIIYRIIIAIVLQLGLKATDLKLLTAIIVAIALSVPVINRKVTRVVGGKRK >gi|343386717|ref|AEM22207.1| ABC-type uncharacterized transport system, periplasmic component, complement(1806611..1807582) [Brachyspira intermedia PWS/A] MKKYLYSLFIITSMIFISCSSGGSNSNAAGDKVLKIGILQLIEHDALDASYRGFVDGLKEAGYEDGKNIIIDYQNAQGEQANCVTIGQKFVNDKSDLILAIATPAAQAVANMTKDIPILVTAVTDPAAAKLVADNNAPGGNVSGTSDLTPVEAQIELLNEITPNLKTVGLLYCSSEQNSVFQMDIAKKKLDSMGIKYIDATVTSANEIQQVVQSVVGKVEAIYTPTDNMIAAGMATVALVAEPAKLPVVCGEGGMTMLGGTATYAISYYELGKLTATQAVAILKGEKKPATMPIETLKTFDLVVNTNMVNSIGITIPESLYNK >gi|343386718|ref|AEM22208.1| hypothetical protein, 1807962..1808108 [Brachyspira intermedia PWS/A] MTARYRLVIIDENSTEQAWYGGSDETVQPDENTICTKYGFVFGYIQNY >gi|343386719|ref|AEM22209.1| hypothetical protein, 1808552..1809031 [Brachyspira intermedia PWS/A] MALALAVSCAKNNPNNPTEDPNTPPDNEWVNNPNFTKLQQKWKYDNYNGGYDITADKVDDWAETAVNYSVSIKYIKWISDTAGIIYGQYTSEPYWAPGVKGKYYAFAFLNLTETTIEISGASGDGNYTDTLTEAISKFTVDNSGKGPYFGVYSKCIVTK >gi|343386720|ref|AEM22210.1| hypothetical protein, 1809055..1809612 [Brachyspira intermedia PWS/A] MKIKKSYLLIIIFSLIVSCSNPATNPDNNNNENTQSSVKAVTSGIYAIQYGSKTSEIDVTDKANLQNLWFNLVNGQTVYKANDYKVIAGNFDNNANYYDSADKANIRTKFIECGVYEYNSKKYLAAIYWDNETGVGKEIRYRLIIVDENGAEQAWYGGGSDENVKPDENTQWVKYGFVFGYIKNY >gi|343386721|ref|AEM22211.1| putative outer membrane receptor, 1809695..1811677 [Brachyspira intermedia PWS/A] MKKLNIYFTALFIITAIFFNHQNINAQTYLIRELKGGIWVTSQVEITNAVQTNQTNNAAAPNIPKTPIKINNNVITSEEIERRGYKNAQEVLANQPGFVNKGSYMGNETVEPAGGSADNMKIYVNGVLMNTAKGNADAGVDLRRIPSNLIEKIEIIGNSIYITTKTPVEDILLISLGYGAYNTITPSILFSKNFDNKHIVTFTADSYYTDGDYYYDFSNQAGKPIIGYLNDNKQLIINSSLDYRYNFENKDYLRAFVNISYSDAVSKYKLPPDNTTDSWFKFTTLTSSISYNGFSDILDYNVNLSYVFDSFVDRPYYQYGKPISDYQSHGISLNANISRMDELLPNTITLYNKLTPEYRYDFLMEDKNAVETNYNFIPQRHSLSLLYEPQLSFGYWDNNTPIFSLLPSIKYEFQHEDFENNRNNNYLAYTVGFNLNFYKGYSLYFSYSHDYSVPTFNDLFYNNFGNPNLKPEEYNQIYTKLTLEPITNLKIETSYAYTVYTNKIVWYSTIPQNVDSAISHIVTPSIEYSIPFAQYHKIKTKIGYSYQLAYMGKDKLPKIGLPEHVVTALLGYDFVPKNKVLSSLSLNIYYTYSTPRPLSEYKPIYYSEVFHDFNISFYSIWFEHLIFSMHFKNILNRTPILSTYSIAKPFTWEFEIGYNF >gi|343386722|ref|AEM22212.1| hypothetical protein, 1811886..1813019 [Brachyspira intermedia PWS/A] MIEFILNTKIISGHNALLELDFSKFKRVSIFTDNNMLKIGACDSTIELMKKNNIDYEIFSDIEPDPSFEIVIKCLSKILTFESDTIIAIGGGSVIDTAKSVIYFALEINKRMPSGLKKPFFIAVPTTSGTGSEVTSYAVITDKENHQKVPLLSNKMLPDIALLDSQFTLTVPPRITAETGMDVMTHAFESYVSVNSSPFTMPYSEYAIIGVFNNISKAVHDGKDVKARIAMHELSCTAGIAFNNAGLGLIHAMAHALGGRFRQPHGRANAILMPYVIEYNAKHCKKSAAKYAKIISLLNVKNIDDDITASKILKALILELNKTIGINEKITDYGVDKTEFENAIDEMASHALKDVCILTNPVKPSLEDVKNLYRNLI >gi|343386723|ref|AEM22213.1| hypothetical protein, 1813158..1814927 [Brachyspira intermedia PWS/A] MLKDISNYIKYRIDRMLNKGLFYQLMLLVFAIIILLLIVSIFIIVFFQYPPKDAFWDSLMQFIDTGNISSVEGNTGIVITFLMVTFVGVCGWGSLIAMINKALQDRINNLSKGNAFIMEKNHAIILGYGEEALTIIEEFIKAKVKTIVILSEHNVDVIRKRVSFIKGYKKTNIIIREGTTSRIENIKLLNISKSSSISIINNDDTESLNILLALKKIIEEIEENKIENKINICVLVHEEDTIEIIKSIENKNFVIHVIYKYEILYKLIAQSIIYTGLSNVYEDLFSNDGNVFYIENDHDFDNWKFEDAASKYFDKGMILLGITKEDKSQILIPNYDYIIKKENRLIILSKNNYDNTIKEYPDIKPNIIKYKNNILLICEEKKYNEIIKEISEYIENNNITMLSYDLIKSQKNKYKFMLEKLKKENTTKIVLISEDNITDVKSINILLIIREIIKKEKLNIAILSLLNSIQKRNLIYSDDVRDFIVSGKLIGMLMAQASISSNILYIFYGLLSRNGKDIIMSPYSDYFNESRTFKDVYFTLLKKKIILIGIKRYNDIILNPNSECMLDNKDEIVIITNYILEEENEELIF >gi|343386724|ref|AEM22214.1| ankyrin repeat-containing protein, complement(1814948..1815292) [Brachyspira intermedia PWS/A] MKNIILIPLMIIALTFISFNKLYPLNQDEETFLDAAIFGDEDVIEKIIAKNINVNIQDDVGNTALILACMEGHVKVVELLIKANADKSIVNKHGNDALYYAKMNNYNNIIKLLE >gi|343386725|ref|AEM22215.1| PerM, Predicted permease, 1815850..1817031 [Brachyspira intermedia PWS/A] MIRDIINPIILFLILIAALIPFWKYIWAKTSIVLILALFTLWVIKEAGYLVAPFIWGIFIAYMFDPLITKMQKKIPRIVGVLLIYIPLLILAIIFVIFILPRTIEQVEIIFKTLPQYVDKIYSSISDMLITLSEKLNRTVGKSFDINLEIDSKAINDFLFGNSGVITLMYRKIIDFRFQNINSITTIFSIIFSYFVILPFVTFYLMLDFQNIKERIIKIIPMRWQSSVSNIIKNSNYIINSYVVGMTILAVSFFIISYIMLSVTNTKYAFILALLRGLLNYIPFIGPFAAFLSALFIGIITEPVWWHGALKMCIIYGIIQILDSGIMAPKILGKSVKIHPIAVMFSTIIGGVLFGFLGVLFAVPFCGIIIITIKNFFNKYYHSKFYTLTKRGE >gi|343386726|ref|AEM22216.1| hypothetical protein, 1817080..1817556 [Brachyspira intermedia PWS/A] MAIMIFLPTFIGKRIPPAFSKEKTQIFNIKRNELYNLLIDYENYPVWLKYISIVRTEKLDNDKIKIMQTYSNRRTYQELIEVRRIENSEISMVKTENEFTALWTYILEDAENDRTRLTIKETMYVYHPYLRFMLKYVLIDENGKNDFFRRVRSFINKK >gi|343386727|ref|AEM22217.1| putative ethanolamine utilization protein EutQ, complement(1817668..1818099) [Brachyspira intermedia PWS/A] MEDMKNIESIVNKVVCDLLNTGTASGYKLDDSNTHKKTLVKKSISDIDSNKKKYEDNSYVTDVFNEYERCHLKCLLMELDNTDMQCVLGYDEIYFVLEGTLIINYEGRKIEAKSGEIVSVFKGDAITFSTPFYTKFLRIINPK >gi|343386728|ref|AEM22218.1| microcompartments protein, complement(1818123..1818398) [Brachyspira intermedia PWS/A] MENLNLSIGIIETTGYIATISALDTLLNASNVIVIDKELIGAGIVVIIIAGSISNIKEAIKSAEMAVEKLNAKCRHTIIARPHNDIWSIIP >gi|343386729|ref|AEM22219.1| hypothetical protein, complement(1818437..1818721) [Brachyspira intermedia PWS/A] MNKNKIVYNTQNVYELINCNSDTIYVPSNVIFTPSAMDIIRSKRIKIVYGDENCACSCGSEVSNNNDTTEIVKQTIKILVNKCNITDEKIIKML >gi|343386730|ref|AEM22220.1| microcompartments protein, complement(1818740..1819285) [Brachyspira intermedia PWS/A] MKSIGMIELNSIARGILVTDHIGKAANVKILRSHSVCPGKYIVIFSGDVGAVESSKRAGVEIGGVSVINSFVIANIHETVIEAINGTLSDFPREAIGVIEYFSIASAIQGADDAAKASDVSLVNVRLGFAIGGKSYITLTGKVSAVEEAVKAGMRKAEDEGLIVDYCILPSPIDELYNSIL >gi|343386731|ref|AEM22221.1| hypothetical protein, complement(1819282..1820943) [Brachyspira intermedia PWS/A] MVLAKVIGSVWATKKEEALSGSKLLITRVFEPDTNKELNILVACDYIGAGIDDIVIITSGSGARNAQGDKNMLPIDAVIVGIVDQVDLNKLKNEGLYMSLKEKIYNAGIVGAGGAGFPSHIKLPEKVEYLIANAAECEPLLKTDQFLMLKYAEKIVKALAIIGKEVSAEHIIIGTKKKYVKQIEALEEAIKKENAHIEIKAFKSFYPLGDEQTLVYNITKRVIKAGGIPLEVGCVVFNVATLCNIYDSLNDKPVTSKYMSILGEVENPCIVKVPIGANLREILYQANVKDDNKYVIVGGPMMGRYYHITETSNLSVKKTTGALIVIDEDHYLVKKKKVNYSKIVAMAKCSCIQCSACSELCPRNLIGHKIHPHLVMRSVAFADLENIENNSEQTLDKLKEANFCCECGICELYSCPMGINPSNMNIYVKSLLRKANIKPDRNVKDYGVHPSIEYRRVSTNRLTTILGLDKYSHVEVDMDNPKEINVSKVSIELRQHIGMPAEAVVKVGDSVSEGQIIAAVPIDKVGANIHSSINGIVESVDTEKIVINGENVK >gi|343386732|ref|AEM22222.1| hypothetical protein, complement(1820967..1821611) [Brachyspira intermedia PWS/A] MDDLTLKKIVLEVINQLNKTCVDSIFVLSNGFCFQNELESIGYNLNIASSANDINIDDYSAIIIDDLSAEILSCISNLIYKNENTSFIINALLSGKKVIALKNNEQFDNYKNTASSQLFSKLLELENIAKSYGLIVLEKNNFLSYFKKDVKENDDKNIVSSGNCCDFTDKRVITKSDIIDIVNDYSSIKVGNNAIITPLVMDYIKENKINILYE >gi|343386733|ref|AEM22223.1| ethanolamine utilization protein EutJ family protein, complement(1821614..1822459) [Brachyspira intermedia PWS/A] MSFSFEHVNSLIDETTECIEKVNDFNINDKLYVGVDLGTAYIVLVVVDSSGKPIATELQYAEVVRDGLVVDYSKACSIVRELKGKLEKRLGVELVNAAIAMPPGVHDKSVATHRYVAESAGFEVLNVIEEPEAANYILNIKNGAVVDVGGGTTGIAIFNDGKMIYTADEPTGGTHFTLTIAGNYGIPFNEAENKKKDKNNSKEIFRIVMPVIQKVGSIINRHIKDYNVDLICLVGGTVCLDGFEGIIEKETNVQTIKPKNPFLVTPLGIAMSLVNNNKDSE >gi|343386734|ref|AEM22224.1| putative propanediol/ethanolamine utilization protein, complement(1822456..1823091) [Brachyspira intermedia PWS/A] MNEQSLLINNISDSIKYEINKRKIIKVEISARHVHLSQKDLETLFGVDYSLTPKRELSQPGQYLSGERVKLVGPKSEMRNVAILGPTRKNTQVELSLSDARALGVKDITINESGYLQGAGSIVIVGEKGRIEAKNSVIIAKRHIHLRTKDAEEWNIENGQIVKVKVYGIRSLIFDEVVARVNDQFMPAMHIDFDEANACGLLSQGYGEIIL >gi|343386735|ref|AEM22225.1| ethanolamine utilization cobalamin adenosyltransferase, complement(1823088..1823849) [Brachyspira intermedia PWS/A] MKVLTEQMLRSEILNKDVSEYFIEEGVFVTPSAKEYLASRKIELKIVSKNHNLNIGSSTSSPKSYGIREIENMGYYVDYETNKRLDTKPENYTHLYNNVLVEKNHPRIMFRGKLDSMLALIVDIQYEFKERHEDKLLEYLKKYQKLIHTILYSEVSNKGLEFDTIFGLTEEEIRKISHHPKEYFGCDHIFVNYNMPYTVIKLNLIRTAVREAELIAYNALKNEREDLIKLLNRMSSAIYILMLMAYTGKDVTK >gi|343386736|ref|AEM22226.1| microcompartments protein, complement(1823878..1824186) [Brachyspira intermedia PWS/A] MASSMALGMIETKGLVSAVEAADAMVKAANVNLVGKTLVGGGLVTIMVRGDVGAVKAATDAGAAAAAKVGELISVHVIPRPHEEVESLLPNNPPANNSDKQE >gi|343386737|ref|AEM22227.1| microcompartments protein, complement(1824212..1824484) [Brachyspira intermedia PWS/A] MASSMALGMIETKGLVSAIEAADAMVKAANVNLVGKTLVGGGLVTIMVRGDVGAVKAATDAGAAAAAKVGELISVHVIPRPHEEVEGIIK >gi|343386738|ref|AEM22228.1| microcompartments protein, complement(1824509..1824781) [Brachyspira intermedia PWS/A] MASSMALGMIETKGLVSAIEAADAMVKAANVNLVGKTLIGGGLVTVMVRGDVGAVKAATDAGAAAAAKVGELISVHVIPRPHEEVEGIIK >gi|343386739|ref|AEM22229.1| hypothetical protein, complement(1824811..1825392) [Brachyspira intermedia PWS/A] MEYALGMIETHGHTAAIEALDAANKASNIILPSMVHVGSGRIAISFFGDVSAVKVAVDCGVAAAEKVGKVLGSNVIARLDKQVLDTLFAYASSDNNNTVEDGNKEIKENEENNTEYKESEEKQTEEKEIEENKQSESNTEIINENVDNTSSDSNAEDASLFDEDVNKKTDNEADSNENVSKKKTRKKKKNDNQ >gi|343386740|ref|AEM22230.1| Aldehyde Dehydrogenase, complement(1825439..1826830) [Brachyspira intermedia PWS/A] MDEKLIESIVREVAKNINILESNNNTNTLGIFDTMKEAIEYASIAQKKFLCSTLSERKRITDSIRNKLRPLVKEMSVMAVEESKMGRVEDKINKNTLAIERCTGVEDLHTGALTGDDGLSLLEFSPFGVIGAITPVTNPTETIICNSINMLSAGNSVVFSPHPSAVKVSNWLVTKINEAIIEAGGERNLVVTVSKASVEEVDYMMESPKINALCITGGMPIVIKGLKSGKKTIGAGAGNPPVIVDETADIEQAAADIVAGASLDNNMPCIAEKEVLAVDSIFDYLMFNMEKNNAFKISKKEDMMKLEKALINPDGTVNKKFVGKDAKYILDTLGIECSYDPRLIIMETHKEHPFAVEELMMPVLPLIRCKDFDEALDLAVKLENGCRHTAAMHSKHIDRLTIAPRRLQTTIFVKNAPSYAGIGLGGEGYTSFTLASSTGDGITSTITFTRKRRCVLKNGLFVR >gi|343386741|ref|AEM22231.1| hypothetical protein, complement(1826849..1827247) [Brachyspira intermedia PWS/A] MELGLNDAFSMALEALKKAGSIHVDVCISIVNSHGEEIFFCKMDNALKISEKLAFKKAYSSVSLKVPTSEIKKLIDDSLCGLDTAMSGELVMFGGGIPIFKDGKLLGAIGVSGGAVEEDILIAKSALEVFNK >gi|343386742|ref|AEM22232.1| hypothetical protein, complement(1827263..1827613) [Brachyspira intermedia PWS/A] MDIPSIIIYDLGNTDSKLMDQVLYGIEEEGIPYIFEKKEIGEYRDVKEASYKAAVASQLSVGVAADNEYIAVHYANLDENTPLFFYPVKSMNIQNMRSVGANSARLVKGIYFILND >gi|343386743|ref|AEM22233.1| Diol/glycerol dehydratase reactivating factor large subunit, complement(1827615..1829486) [Brachyspira intermedia PWS/A] MGEHSNNNNFMEVPMKYIAGIDIGNSTTEIAVAKISDNNDVEFISSDLVFTTGIKGTFSNKHGIFGVLKKSLDKVNLTIEDISLIRINEATPVIGDVAMETITETVVTESTMIGHNPKTPGGSGIGIGKSVLYDDISNINKGEDVIIVVPNSIDFKDVANSVNNAVSKGINVNGLILQKDDGVLVQNRINKNIPIVDEVLLIDKVPIGMLCALEVALPGKVIETLSNPYGIATVFNLSPEETQSVVPIARALIGNRSAVVIKTPEGNVKERRIPAGKLKIIDAKKSLEVDIEAGAEKIMSTINKATDIEDIIGEPGTNIGGMIEKVRQTMAKLTNKDKDDIKIRDLLAVDTFVPRSVKGGLANEFSMESAVGIASMVKSDRLQMEIIANELKKDLNINVEIGGVEADMAILGALTTPGSSSPLAIIDMGAGSTDASLIDKDGKISYTHLAGAGNMVTLLINSELGLDDLEMAERIKKYPLAKVESVFHIRHEDGTVQFFKEPLDPKLFARVIVVEENNFVPIDSDIPLEKIRIVRRTAKEKVFVFNSIRALETVSSTGNIRDIPFVVLVGGSSLDFEIPQMVMDALSHYKIVAGRGNIRGKEGPRNAVATGLILDYVRAMRNS >gi|343386744|ref|AEM22234.1| glycerol dehydrase, complement(1829692..1830171) [Brachyspira intermedia PWS/A] MIKEIVSNINNTSNSRSISNSSVEISAKDYPLGYNRKDLIKTSTGKSLDDITLDAVMNDRVGPNDVRITAETLEYQAKIAESVGRKIFAMNLRRAAELTRISDDRILEIYNALRPFRSTKAELIAIADELESKYSAKISASLVREAAEVYEKRDRLRRK >gi|343386745|ref|AEM22235.1| dehydratase medium subunit, complement(1830217..1830903) [Brachyspira intermedia PWS/A] MNIDEKTLKLIVSEVIKNINSQNNNTNGSTSVSSNPNPNVSTDHQAPPPLNFKELGKAEVGKNKSEVVIGIAPSFGLHQTETIVHIPHSQVLRELIAGIEEEGLKARILRFLHTSDVSFIANAAAKYSGSGIGIGIQSKGTTVIHQKDLLPLSNVELFPQAPLLDLPTFRAIGKNAAKYAKGESPTPVPVRNDQMARPKYQAIAALLHIKETEHVIDNADPIELSISL >gi|343386746|ref|AEM22236.1| Glycerol dehydratase, complement(1830914..1832575) [Brachyspira intermedia PWS/A] MKSKRFEILRNRPVNQDGFVGEWPEVGLVAMDGPNDPKPSIKIVNGKIVELDGKKAEDFDFIDTFIANYSINIENAEKAMAIDSKKIALMLCDPNVTRSEIIPITTSITPAKISEVMSCMNVVEMMMALQKMRARKTPSNQCHVTNVKDNPIQIAADAAEAAVRGFDEEETTVGIVRYAPFNALGLLVGAQVGRPGILTQCSLEEATELLLGMRGLTCYAETISVYGTERVFTDGDDTPYSKAFLASSYASRGLKMRFTSGTGSEVQMGYAEGKSMLYLEARCVFITKGAGVQGLQNGSISCIGVPGGVPSGIRAVLAENLITECLDLEVASGNDQTFSHSDIRRTARMLMQFLPGTDFIFSGYSSTPNYDNMFAGSNFDAEDFDDINVLQRDLKVDGGLRPVKEEEIIAVRNKAARAMQAIFADLGFPEITDEEVEAATYAHGSKDMPDRNVVEDLKAAQSILTNGITGLDVVKALYRKGFEDVAQSVLNMLKQRVAGDYLHTSAIIDRNGYVISAVNDVNDYHGPSTGYQISKERWEEIKNIPNAISPDSI >gi|343386747|ref|AEM22237.1| propanediol utilization protein PduB, complement(1832597..1833289) [Brachyspira intermedia PWS/A] MSRAIEFVGTAIGDTIGLVIANVDKSVLEKMNFETKYRSIGIIGCRTGAGPHIMAADEAVKATNTEIVSIQLARDTKGGAGHGSLIIFGSDDVSDSRRAVEVVLKDLDRTFGDVYGNEAGHIELQYTARASYACNKAFGAPIGKAFGICVGAPAAIGVVMADTAVKSANVEVVGYASPANGTSFSNEVILQICGDSGAVRQAIIAAREIGCELLGTLGATPKNDRPSYII >gi|343386748|ref|AEM22238.1| iron compound ABC transporter, ATP-binding protein, complement(1833869..1834654) [Brachyspira intermedia PWS/A] MNDINKANKINKMVEVKNISLSYPNKKEVLKNISFDVNSNESLCIIGPNGCGKSTLLKSLCKIINFDEGEILINNENIKKVDTYKTIAMMSQMSAIYFGYTAYDTIMMGRYSSYKDKLLSIPSKEDKEFVIYYMEKLKIVHLKDKLITELSGGELQRIFLARTLVQNPSIILMDEPTNHLDLNSQIELIYNLKEWVGNGLRCIVAVLHDINAALNFANKLLVLKNGSSKYFGSIDDFDMRLLNDIYDINVIEYMKNSLKRW >gi|343386749|ref|AEM22239.1| ferric ion ABC transpoter, complement(1834661..1835668) [Brachyspira intermedia PWS/A] MIKKVIIILLLVIISTVLSICIGSVFIHPKEVFAILLYKFFNFEIMNIDKINADIIGIRLQHSILSLFVGASLSITGVVIQSILRNPLASAYNLGISSGAGLGAALLIIMHISFNQYFFIGVSMLFASITILFILFISNRIDKYMSNNSIILAGIVISLFLSSVMSFLSYMFPKYSNQIILWQLGSLFVRNKLDIFIIILMILISLLLLMKYSSVLDIMTFGDETSLSLGINVKNMRIFFILISSFITAVLVAFTGIIGFIDLVSPHVTRKIFGAKHIVVLPMSALMGALILNVSDIFSRIIVQGANIPIGIVTAVIGAPFFLYVFISSNNMKGM >gi|343386750|ref|AEM22240.1| iron compound ABC transporter, periplasmic iron compound-binding protein, complement(1835674..1836612) [Brachyspira intermedia PWS/A] MKTVRVFLFIFLSIFLFSCSNAGTNNKNLSIKDRAGNDIVLPEKIENIACLSPAVTDVILALGLADKIIAFDSTSKEILQTNNIDVSNIAVFDMLNPDSEKMIAMKPDIVFVNTFSVFSGKNSLDSIKASDICIVVIPNSDTIKSIEDDITFLGNVLNKSGESSNIINVMDKNIENIRAIGESIQNKKKVYFEIAALPNLYSFGTNVYLDDMINIIGASNIFSDKNSWITTTEENVLFANPDIIFTSVHYIDNPTEEILSRASWQNVNALKNKNVYYITSGSLPTHNIVNALIMMAKYAYPDEYKDIEIIRN >gi|343386751|ref|AEM22241.1| biopolymer transport protein ExbB, complement(1836685..1837317) [Brachyspira intermedia PWS/A] MNSIFGSESLLNSAMIICWIGLLISSILGLTIIVDRFIYFTRIKSQDNSLAPKLISLIKDKELKAAIALCETAKSPLANIVMSGLKNSDMPKESMQSASNKELPRLERFISALSTISTVAPLLGLLGTILGMIQSFAVISVAGSGNPSALASGIANALLTTAAGLIIAIPTVVFYNYFVNTLNERILFIENLSNEVSDYIINDSNTKTEN >gi|343386752|ref|AEM22242.1| hypothetical protein, complement(1837438..1839165) [Brachyspira intermedia PWS/A] MIKNLINKNKKLYFILLLLILIIFLMISCKKINILGPNNIPPPTDFRLPEDTIPGHIDVNPVPAKDGEVFGSFQRKFKYQGKWYVLADYMYDYDPKTKTLNRKAEDIILQIDNNGNIVVYDKDSKGYRDLLRMNVIEENRVLYEDSYYGTYSYSSSSYTTINCKGTEHYHPFRTGITFNNVIYTSSDLINWTTDGSSDNVYKTFPSVSPNPNESFQGTFGVSSYKIVEFKDYIYLIGLEEDFDEQNPSGCRNENAGSFTVSKDIYYRIDKNKDTSTGANWEKITTPWGQRSSLSIRYDENKIYVTKGERGYYELGNPYWDYKTQSFENDNTIWSSTDGVNWQVEPNSSAYDNANEIYSYSSSVGGDLPYIQNKIKTPEEPNWIKLDNGRYYKSDNSPYATYTINNKTYYVPIPPYEEIRKAYDSGQEYFTITEAHIKSAGLNQFLTKDKEPNKDEDWTVITPIDYTDKLMVWQSGGEKVMLNINNKAVQLVDYQQIEYMYNTIKDYSIVINDLRKTAKELRDGTYFDPFVGTYVKNVRVGMEYDARADMLELLKSNREYIMPDEAVTHYTVEFKY >gi|343386753|ref|AEM22243.1| N-acetyl-gamma-glutamyl-phosphate reductase, 1839590..1840648 [Brachyspira intermedia PWS/A] MIKVSVIGATGYAGAELIRLLLSHSKVELKNLSSKSFVGKNINEIYPNLNKNLDKLLLDENEIFEDTDVVFASLPAGLSDDIANKCFEKNILFIDLGADFRLDDEEDYKNWYGKEYKYKNLHKEAIYSIPEIIKYDNVYNKKELKNAKIIGNPGCYPTSIGLALAPAFVNKLIIKDDIIIDSKSGATGAGRELKLNTHYTECNEAFAPYKIAEHRHTPEIEQTLSNIYGEDIKVTFVPHLLPLNRGIVSTIYGKLENKNIKLEDIHNTYKEFYKDSAFVRVLNIGEIANLKYVKYSNYCDISLHMDARTNKLIIVSTIDNMVKGAAGQAIQNMNIALGFKEDEGLNFIPPAF >gi|343386754|ref|AEM22244.1| arginine biosynthesis bifunctional protein ArgJ, 1840778..1842007 [Brachyspira intermedia PWS/A] MTDIKQIEGGICASEGFLANGVHAGIKKNSEKKDLAIIYSKSLCSAAAVYTQNKACGANITVSKEHLKDGKAKAVICNSGNANTCNKDGVDKAKEMCKLTADVLGIDEKDVAVASTGVIGVPLPIEPIQKNIKTLIENANHSAEHAKNAANAIMTTDTFMKEIAYEFEIDGKKIHIGGMSKGSGMIHPNMATMLAFVTTDCNISSEMLQKALSEDVKYTYNMISVDGDTSTNDMCVVLANGEAKNTLIDKEDDNYKIFCKALNMTNTYLSKQMAKDGEGATKLIECEVINAESLKLARKIAKSVITSNLVKAAMYGCDMNWGRISCAIGYTDADFDINKVSINVGSKYGEMNVYKDGYGVEFDEDEALKILKEDEIKITIDMNCGNYKATAWGCDLTYDYVKINGSYRS >gi|343386755|ref|AEM22245.1| acetylglutamate kinase, 1842043..1842909 [Brachyspira intermedia PWS/A] MDNISNRDKAFILNQALPYIQKYTGKTVVIKYGGSAMENPELKKKVMSDVALLSTVGIKVIVVHGGGKDITAMLNKIGKESKFINGLRYTDSETAEIVKMVLAGKVNKELVASLENCGGKCLGICGIDGKMFKVSKYKGDYDLGFVGDVDDVDTDLLNTIISNKYIPIVATVGCDDEGNVYNINADTAAAKIAESLKAETLIYMTDTPGLLKDKDDENTLISQINIKDIDNLIKDGTISGGMIPKVKHCIDAVDNGVSKVFIIDGRLCHSLLIEMFTDEGIGTMFYKD >gi|343386756|ref|AEM22246.1| ArgD, Ornithine/acetylornithine aminotransferase, 1842952..1844184 [Brachyspira intermedia PWS/A] MPCKKTNNNQDNEKSKLKKEYINNGKKYVANTYARFDIVLESGKDCKLKDIEGKEYIDLGSGIGVNSIGYGNKNYINAVTSQLKTLQHTSNLYYTKPYIDLAKKLCSITKYDKVFFCNSGAEANEAAIKCARKYSFNKYANNNKDYKRYKIVTLKNSFHGRTMATISATGQEVFHNYFFPFLEGFSFAEANNYEDTIEKLKDNACAMMMELIQGEGGVIPLDKEYVQKVQKYCEENDILFIVDEVQTGAGRTGKFLCSEHFGIKPDITTLAKGLGGGLPIGAMLMSKKCSDVFVPGDHASTFGANPVVAAGALEVLNIIDKNLLKEVEKKSKYIKSKLMKLDNVVSVDGIGLMLGIGLKEGLNAREIVEKCISKGAIPLTAKNKIRLLPPLTISDKELEKAVSILCECLG >gi|343386757|ref|AEM22247.1| hypothetical protein, complement(1844249..1845049) [Brachyspira intermedia PWS/A] MINFILLKKEFKSNLKILLIFAAVLTMYGAIIVSMFDPKLVDSLNSMVESMPQMFALFGMNNFSNNLTDFLIDYLYSFLLIIFPLVFIVLLVNRLVIRYIDKGSIAYLFATPNSRIKIISTQILNAVIEIFILNLYITMLIIFTSEIMFKSELDISKLIIINVGLYGLWLSFLGICFLSSISFSSSAISLWAGAGVCILFMLFQMISRVGEKAEFFKYLSIITLFEPSKYSTDFNIFLIGTICLFIIGIVTNILTVIIFNKRDISA >gi|343386758|ref|AEM22248.1| ABC transporter-like protein, complement(1845094..1845978) [Brachyspira intermedia PWS/A] MSVIKVDNITKDYGSSRGVFDLSFEVNKGEIFGMLGPNGAGKTTTIRQLMGFIKSDKGNAKILNMNCFYKRENIQSKLGYLPGEIAFMDEMKGDDFINFIADMKSIKNKNRIKELIDIFELDANRKINKMSKGTKQKIGIVCAFMNEPEVVILDEPTSGLDPLMQKKFIDLILEEKKKGTTIFMSSHIFEEIEKTCDRTAILKDGRLIAIENMDELKSKKNKNFEVVFKNEKDAENFKNKISFKSELNNNNIVKIVIANNEVNSFIKELSNYDILDINSSSQTLEELFLHFYNK >gi|343386759|ref|AEM22249.1| AcrR, Transcriptional regulator, TetR family, complement(1845997..1846611) [Brachyspira intermedia PWS/A] MSKNANIPEDKREAIINASIEEFSKYEYKHAILENISNNANISKSLLLYHFQNKRNLYLYVYEYVYEYIGKIIADSDFFKITDFFELMEYSFYKKLEMMEKYKSIFDFLIRGYFDESEVVKEIVNNYKNKKQIDISSYFKNIDTTKFKDDVNMQDIIEMITYTSEGYLQSRKKMKIKIDKDDMIKQYSKWMKMFKQISYKEEYL >gi|343386760|ref|AEM22250.1| Dihydrouridine synthase-like (DUS-like) FMN-binding domain protein, 1847117..1848088 [Brachyspira intermedia PWS/A] MKRNILIEGVDIPSRFFLAPMAGYTDHVFRRLSRRFGAGLLITELVSAAALARQVKKTYRYMEHKEDEYPISLQLFGANEDDYKRAIEITDLSGFSFIDINMGCPTKKVVKNNGGAGLLEDTDKMISVLKAVKSVSPLPVSVKIRLGLKRGEGGEIERALAMKENGACFLTLHGRYASDMYRGTADWESIAKVKEALGEDYILIGNGDIKNKEDAIKAFDISKVDGIMVGRGAIGNPWIFAELNTIFEDNDEYKLKEEDNLKNIIREHIDGCCELYGEISGIHFMRKFIMKYLTGYRMENKIELMKCENKEELFKILDNIITE >gi|343386761|ref|AEM22251.1| ABC transporter related protein, complement(1848177..1849292) [Brachyspira intermedia PWS/A] MSSIKFEHIRKVYDNNVEVVKDFSLDIADKEFVILVGPSGCGKSTTLRMIAGLEEITDGKLYIGDRLVNDVAPKDRDIAMVFQNYALYPHMTVFKNMAFGLELRKTPKDEIKKRVEWAAKVLDISHLLDRKPKALSGGQRQRVALGRAMVRNPSVFLLDEPLSNLDAKLRVQMRTELIKLHKQLQTTFVYVTHDQVEAMTMGTRIVVMKDGDIMQVDDAKTLYNSPKNLFVAGFIGAPQMNFINAKLSKKDGKWYASFGRYEIELNNERVSKIDDSYNGKDVILGIRPENITLYKDKSETNSNNLIEAIIDVIEMIGSESYLYMNFGDLQVTIRINTSDDYERDQRAYMEFDLNKLHIFDKDTEKNILIEQ >gi|343386762|ref|AEM22252.1| phosphoenolpyruvate-dependent sugar phosphotransferase system, complement(1849802..1850800) [Brachyspira intermedia PWS/A] MESNKKDVKFILPMNLLGGRENIVKVNNCATRLRLEVKDVNKVNAEEIKKYYPAVQKISDKEVHIVVGTNASELAESLERIMAFDDNASNRAMTLLPLLGNRENIVKVNNCATRLRLEVKDVNKVNTEEIKKYYPAVQKINDKEVHIIVGTSVSELAEDLEKLITSYETNDRDITYANDALMLIPLIGGIENIVKVNNCATRLRLELKDVNKVNADGIKKYYPAVQKINDKEVHIVVGTSVSELAEDLEKLLGSQTLKTSLLLPLVGGIDNITKVTNCATRLRLEIKDINKVNIEEIKKYYPAVETINNNEIHIVVGTDASELAKEFKKFVI >gi|343386763|ref|AEM22253.1| phosphoenolpyruvate-dependent sugar phosphotransferase system, complement(1851136..1851627) [Brachyspira intermedia PWS/A] MESNKKDVKFILPMNLLGGRENIVKVNNCATRLRLEVKDANKVDEKEIEKYYPSVQKISPTEVHIIVGTNANLIAESLEKILASDYSVYNNLSDIISLLGGRENIVNINNCATRLRLEVVNADKINEEKYYPVVQKISPTEVHIIVGTKAFELADELKKLLNK >gi|343386764|ref|AEM22254.1| pts system, N-acetylglucosamine-specific iibc component, complement(1851749..1853173) [Brachyspira intermedia PWS/A] MVPVAVLPAAAILLGIGYWIDPNGWGGGSPVAAFFIKAGGSIIDNMPILFAIGVAFGMSKDRNGAAALAGLVAFLVVTTLLAPATVAMIQSKPVEQVPAGFAKINNQFIGILCGVIAGGLYNKFSEIKLPEFLAFFSGRRFVPIITSVVMMVVSFILMVIWPAIYGGLVAFGEAIIGLGPIGAGIYGFFNRLLIPVGLHHALNSVFWFDVAGINDIPNFLGGQASIDAGTATIGVTGMYQAGFFPIMMFGLLGACLAFIKNAKPENRNKIKSIMLAAGFASFFTGVTEPIEFSFMFVAPVLYVIHALLTCISLIISASMKWMAGFGFSAGLIDLLLSTKNPLAVNWYMLIIQGIVFFVLYFVIFNFAIQKFNLKTPGREDDDDVEVEVSVSGDASYAEKALMLLPLLGGIENIVDIDNCATRLRLEVKDNTIIQAAEIKKMFPGVLTPGKTSVQVIVGPKVQFLADEFKKVAKK >gi|343386765|ref|AEM22255.1| PTS-dependent enzyme II, 1853464..1853943 [Brachyspira intermedia PWS/A] MEVFIMGLFSKKIEIKSPIKGRLVDVTEVKDEAFSTKALGDGMAIVPEEGKVYSPVDGEVITMVDSNHAIGLSSKGIEILIHIGMDTVKLGGKHFKAHVKEGDKVKVGTLLIEFDKEEVEKEYDITSPVIIPNFSELKSLTKTAPRNVSTDDVIMTAVK >gi|343386766|ref|AEM22256.1| response regulatory protein (atoC), complement(1853999..1855348) [Brachyspira intermedia PWS/A] MPKILVIDDEKNIRDGIKKSLEFEGYEVVTAENGEKGIEIVYKGGIDLVITDLKMPEKTGEEFLKDILDFDKHIPVIVLTGHGNVETAVEMMRLGAYDFMTKPFNLDKMLLIIARALESKNIKKTNETLESRVDYHESFYGMIGHSPKILKVYEAIKQVARTKATVLIEGESGTGKELVANAIHQISDRAKQPYITVNCAALSEGVLESELFGHEKGSFTGAIDKKIGRFEAANKGTIFLDEIGEINQIVQVKLLRVLEERVIERVGSNTPIEVDIRVIAATNKKLSEEIKEGKFREDLYYRLNVIKIEMPPLRERREDIPLLIDNFIKEFSKVHSIEIKSVDKKVYKILSSLQWEGNVRELRNTIETMVVMCKDGKIDESNIPDWALKNSESNFVVENDVTLEELERMYINHLLSNNNFNKAQVAKILGIERATLYRKLKEDIKDNKE >gi|343386767|ref|AEM22257.1| sensory box histidine kinase, complement(1855352..1856533) [Brachyspira intermedia PWS/A] MNRRNQFFDKILQNFDKVSDNEKKKVFKRLSTLWYSQNIILENLEEGIIAIDDKNAIQGINKKACFLFSIPRNSEGKPLSKYMSSTDIGRSILELMKDNISDTKLLKDDENERILQINILPIGDSGRIIGTLIKAFDITKTYESAQKLKRAEQLASLTTLAAGVAHEIKNPLGSISIYVQLIDKIIKKNMDNECQCYKDFKEYSDIIKEEISRLEETINSFLFSVRKLELNIEDVNINELILSTIAFLKYEIEKNNVNIDVKFDKDNLILKLDEKYIKQSLINIIQNAIDAMSDNADDKKKEIFIKLKTVDNYAVISIKDTGVGIKEESLGKIFEPYFTTKRHGTGLGLTNVVRIIEAHNGNVTIESEYGKGSEFIIKLPLKQENQKFLETDL >gi|343386768|ref|AEM22258.1| peptidase, complement(1856584..1857939) [Brachyspira intermedia PWS/A] MSENSFMNRIKEIYNDIKNKAKDIDEIEIYMSSSGEEEFTVREKDLDKYTYAESGGIGLRLIKDGKVGISFTEKISADINIDDLINNAKTSLHYADSEPEYNKLIDKDDDEKSYDMINKDIVNLSNDKLKEISLSIEDKLYSLDNRIVNVPSAGLARYNFNKCIINSNGICKEEKKNSIAYYGEVIAKENDTVKTFFDVYSSTDAVFDIDSFTKNIVDNVVNKLSAKPIESGKYKTVFTNKAMRIIIGAYLGLFSSEAVQKKLSLLQGKLNQKIASSIINIKDIPMYDKGLANTNFDGEGSKTKDLNIITNGVLNSYLYNNYTAKKDGIKTTSHASRGFKTSIGISCHNFILENGNNTQEELISQIQNGVLVNSLTGTHAGVNAISGDFSLQAEGIKIENGKLSYTASPFIVSGNILDLLSNVEMLANDTDYHHSSIYAPSALIKELSFAS >gi|343386769|ref|AEM22259.1| peptidase, complement(1857940..1859328) [Brachyspira intermedia PWS/A] MKYFNFDENFLHTVLEEALKNGGEYADLFFEDTKVNSISYLDSKVDDMSLGNNYGVGLRIIVNKKTIYLYSNDTSNNSLINLAKSAASIVNDKKYMVKDFIQSKEKDNHPLHINPFDVNFDDKIEVLSYLDKTSRGVSDKIKQVNAMYSEKQRNILVCASNGILKEDSQTYTRLIMMAMASDGTNTQTARRTKGALDGFQVIKDINLEDMAMETANSAIKMLNSKYPKSGKYPVVIDNAFGGVIFHEACGHALEATSVADNASVFCNKLGEKIASDVVTAVDDGTIKNAWGSYNIDDEGNEAQRTVLIENGILKSYLVDELGSMKMNQKITGSARRENYKYPPTSRMRNTFIDKGNASFDELISGIEYGLYAKKMGGGSVDPATTDYNFAVSEGYLIENGKITEPVRGATLIGRGDETLMNIEAVSSNLELADGICGSISGSVPTTVGQPAIKVKELTVGGR >gi|343386770|ref|AEM22260.1| nitroimidazole resistance protein, complement(1859362..1859775) [Brachyspira intermedia PWS/A] MLAVLGDDDYPYAVPLSYVYYDNKIFFHVAKSGYKLDAIKNNNKVSFCVIEKDDVKPKEYTTYYRSVIVFGKAFIIEDDNQKRKAIEKLALKYYPNDNESNRNNVIDKEYDAFYIIELHIEYMTGKEAIELVNNAFK >gi|343386771|ref|AEM22261.1| hypothetical protein, 1859950..1860345 [Brachyspira intermedia PWS/A] MHTINVKTKARFDIVDITGEVQKCINDENIESGIAVIFVPHTTAAVGINENADPDVVFDMKNAFNKLVPQHDNYEHREGNSQAHVLSSLVAPSLTVIIENKKIVLGTWQDIYFFEFDGARNRKVYVQIISK >gi|343386772|ref|AEM22262.1| aldose 1-epimerase, 1860624..1861628 [Brachyspira intermedia PWS/A] MFRSKKEDFGKNSYIYTLENDKGLKVKLAEVGATITGIFFKDKEGKEVEVAFGSDDIEFYTDKAKNGHMGATVGRVAGRTLGAKFKIDDKEYNITANKAPDHTHGGTNGLSYVMYKSIQKKDNEVLFSYVSKDGEEGYPGNLNLIVKYTITDENEIIIDYIATTDKPTPLNVMNHSYFNLNGSGNIKDHEMFIDAKYYLADENGITSGEILKTKNTPYDFTSLKKVDDIIKAKDGCDNCFIFDDNDINKQRVKILSRKTNIALEVFTTQPSVLFYTANHFNNFKVRDQILNRHEAFCLETQSLSCALNFNHFPSIILYPDREYNHRTIYKFSLI >gi|343386773|ref|AEM22263.1| hypothetical protein, complement(1861709..1862386) [Brachyspira intermedia PWS/A] MKRIFILFILLLSFNALYSADFVAGFVGRIGGSSATTDRSKVFTSNFRDFDNSFSFQPGVFWGYDDFLSAALLLDIGYSKDRYEIKYTINGKRVLENYNFGSFSIGVFPRFNVGFFSIGFGGGIKLPLSLKYTKEGDEFSKNRYSLDFGDIQDAFTTSYIPYIKVSADFLIKINRKFMMSLGVYANYDFPIDIDKNGIFKDFTINQDSLASFDIGFQIGMYFLSR >gi|343386774|ref|AEM22264.1| hypothetical protein, complement(1862395..1863009) [Brachyspira intermedia PWS/A] MSVGFTSQFGLSGANTNASKVFPSGFRDFDSGFAFSIGINQPVASSMSFSVLLDLGYYHDSYDFRYNINGKRVTENYQFDSFLVGGYGRFNFAFLSIGAGGGVKIPGMATYRVNGYNIGGRYRFSFGDLNDIFESAVIPYVRFSLDFSIFNYLLIGVYVNYDFPLYFQHNNYMDNVFVNKDSISAFDIGIQFGYYLNINFNRDY >gi|343386775|ref|AEM22265.1| hypothetical protein, complement(1863125..1864294) [Brachyspira intermedia PWS/A] MNNDNVNTSAYKNIIRNFNIAIGIAFILLVSAIYVTYIFNINIPQLNSNTNLAVLEGIAIESFIYNIRIFFSFLIPLSSFIFIFLFVLNPISMKSILISFVLIFLMAFYLYKLPYDILVNPFENLYAFISLIINLISANLIILFIAGLSFIRYDIKKFNALYDFYTMITEIIIWSFLILFVISLIVFSIIAVLYFNDKIDAKRIFRFLIRNDMKNLKILLSVFAVLNTLIIYFSYLLYNKMVNTKLSISVSRVITPLVSVLSIVIIILTFRYHIINNNHFRFLFLLYILFMIFFILNIFLFRIDKEHNKIEYYIYIISNVFGIIFSIFLLYISFNQFSYYYFIILNLIAMINFLYNIFVSIMKKYIKFMFLYNFIYIIFFIILLFIDFI >gi|343386776|ref|AEM22266.1| hypothetical protein, complement(1864297..1866243) [Brachyspira intermedia PWS/A] MFYVLIFSSCSKNETINNNLNTNDINTNNINADNLQTNDYSDIVYKNDNAFFDMKYVYKSIRVDKEAFSNILISYYQDSKYSNIINRNKDFLNKKLVGDNDIKKYAIDFISNTYHNHYSDNVHSDNSVFSYASEYNYVEQNLALKKARELLLSIKNKDADIYLALFLSHFATDSLYYFNDMQNYLKEWKKLGSTNISMMIGIVGEGNNINNIYSNKMKLINYIIEAPSDLGPEKLVADAYENGFLSDISKDTGYLDIYNENNYNLSSVIYNNDSNISYFTVARDIVNTNIINKYIRTYTGKTLTRDKMASPVYYENFYYTYNPSLDQKYEDFADLYFLEFNKNTFIYSIKGNKLQGVYYLNPMFIGNIKYADYKIEEIFNFHLGDDSKLESAKISAIKTTDLKNIATNSQFILEGKFDKNKYAEYLDDILSFPIYNPEFFLCDINNDGKDEIMVRGTYKHSGERSGIASYTLLLKDNLELNLESTIGKSINGSSKQGLNNFQKMYLEDGKNKILLIDPNANTAQDIFAENGVVNVYEFTYKTYKYNPRVVWKGKIVNGVPDGVLKTDAGFDMYKAKSDSDKAIVSDKTLRVADKLMSDEYDKESARLSKDKQEELLEKKRSYTKAIQDKYGDILEIENEMIKILGIDK >gi|343386777|ref|AEM22267.1| HAD-superfamily hydrolase, subfamily IIA, 1867123..1867893 [Brachyspira intermedia PWS/A] MISIISDMDGVIYRGNNLIEGAEDFIKMLLYKNVPFLFLTNNAEQTPRDLKRKLESLGVNGLDEKHFFTAAQATAIFLQRQLANGTAYVIGTGGLVSELYNVGYSINDVNPDYVVVGKTNAFNFDMLQKAVHLINKGAKFIGCNPDIVDPAPNGELIPAVGPILAAIETATGKKPYIVGKPNPIMMSIAKNQINAHSENTLMVGDRMDTDILGGLGAGMKTALVLSGVTTKAIMEEFPYRPNYIFNSVAEIDIEKL >gi|343386778|ref|AEM22268.1| major facilitator superfamily MFS 1, 1868137..1869273 [Brachyspira intermedia PWS/A] MSNLLFIIMTLLWLSLYVYIPYQVPYLSSINISTSMIGIIIGVYGGAQVFLKFTFGILNDYVGKCKVFILLAGILTFLGAIIRLFNLNAVGFLMGGILCGISASIWTVFMVLYASYFDKSQEYKATSKSLVASVSGMFLAFLIAAFSYNKFGMKFLLYVSAVSGVLVFILGIFLQDRKSSKKLSIKGLLSVIKNKRLVIFSVLAIVMQGIQMAAIVSFTLNRIKELGGSDQNVGMASITGMFFAILGAFAPSRIKNENNIKKYIPIFFVVMALYCITVILSDNVYVIIVSQSFGGFSSGILASLLTSESIKEIDTNKKSSAMGFFQSTYSFGIFIFPIITGKLIDMYSINIAYIVLAVISLLSAVISIIYYMGNRYKK >gi|343386779|ref|AEM22269.1| putative transmembrane protein, 1869349..1870275 [Brachyspira intermedia PWS/A] MSENSKSNNNVGYIFAILAVIIWSGNFVAARFLVNLTPIEISFYRWLVTFLVLTPFCIKKLLETIKYIKGIWIQVIILSILSVTLFNTFVYMAAHTSNATNMSLLATLSPIVIALISRVVWKTKLSIYQKIGLLAVIIGVVILITKGSIEVLMKLQFAIGDFYMLIAVIIFSIYTLILRIKPKEMPHHIFFYLMVIIGFIPLMAAMIYLYISNNAHALNMQTGLILLYVGVFPSALGFIFWNIAIAKIGAIKGAIIYDSVPFFSSLEAVILLNEKLLLSQVLGGILILIGIIYSSIGDKIADKIKNRK >gi|343386780|ref|AEM22270.1| signal peptide protein, complement(1870340..1870849) [Brachyspira intermedia PWS/A] MKKKFLFVSALLMLSVLVLNAQNVKANDVVGLWYAEKDSLGRIPVVEIYEENGRYYGYSFAYKEPYNGPDSLDEKNPDPELRKLPLKGLVYIMGLVFDKKEWNGGKIYNPYDGKTYNSKMSIDKDGKLVLRGSIDKAGLLGKSMKWTRVPDSEKSRFTPLKKSELRKFN >gi|343386781|ref|AEM22271.1| hypothetical protein, complement(1870999..1871706) [Brachyspira intermedia PWS/A] MNNFFFADSYVLAGIEQEFSSFSRTSAYVEFQPLIALKMLFKFTYEAGLADPGRPVLVDGNTKEFNHALPPFTGLNPMNKKPQYVGGNTIYVQFAPTLTMGGPAGPGLIALIYTPYINYVRAFGVDKNEYVYLARESIVVKAEDVYFNHDIKLGYSMKEWGMSFAINTTIEHMLSSSKDLYRVGLFAAYSYKKALNSVPSLSPFVSTKIGTWLIEKHAQYKFVIQLDAGIEWKFH >gi|343386782|ref|AEM22272.1| hypothetical protein, complement(1872027..1872527) [Brachyspira intermedia PWS/A] MKNKIITILIFTMISSIIAFAQNADDIVGLWYSQADAKNRVSVVQVYKENNKYYAYSFAYQNSTDTVNDVNNPKAELRNLPLKGLVYLYDLEFSKGEWKGGKIYNPEQGKTYNAKASISDNKQELKIKATIDGAGLFGKTLTWKKVPSNEVSKYTPLNKSELRKLN >gi|343386783|ref|AEM22273.1| Phytoene dehydrogenase-like protein, complement(1872634..1874265) [Brachyspira intermedia PWS/A] MTNNNKYDIVIIGSGLGGLTSGAYLAKKGKKVLVLESHNIVGGCATVYKRKNVKFEVGLHEMDMAKKSRDGKYPILKQLGIYDRVDFVKLPQTWRIKTESTDLVIPEGYQNVMNTLEKEFPEEKGGIKKYFGGLSRMMYMIRRLPYDLKFFDFLFYPITTFPMNLYHLFTQKKLGNVLDSIIKSDKLKRILNINITYYHDNPYEFTWYYHACAQGGYYNQACFIKGGSQNLSNALADIIRENGGEVRVSSEVKKINVKGNIAEGVTYFDKRAKEEVTVNADYVIANAAPKVVYDELLPKGYEDKRINKLKNSVSLYTVYIIFKKKFTELYPNNAYSTFISTEKMLNTPFKEDAKGQRNIPVEDRNFVFVDYSTIDSGLVEEGDERSFAVLTGPSYLDEWKDLSDEDYKAKKKELAEKLIDRAEKHYPGFRDNIEYYEVATPKTIKRYIKTPEGTAYGFVQDGYLKKSRSVRVSPTVKNLHFASAWGFPGGGFTGAIMSGYLAARNILFPIKPYIVLRILLCSAFGTAVGTIHHWLPALMNLFK >gi|343386784|ref|AEM22274.1| hypothetical protein, complement(1874558..1876282) [Brachyspira intermedia PWS/A] MSCKKVNLLGPNNIPPPTAFPIIDDEKPEIPDYPDPTPVPDPPDEGDIEEKPIEVKPEVVPNGTVFGGYGRRFKFKNDWYVLATNEYEYNPETKMLRQLNKGAVLRIEKDGKTITKIYSLKLGDNLEQAEYWTNLNSKKLIIEANKVLIPSNPEQKAYGYDLYEVKFEKLNFDSVICLYPYYPFGVYSNYTIDFISRESDSLINWAYSANREKKTYNIPQPNKDNPTIQGRYGVHGLTFSSLFYLNGRLFLFVQESPMDTHPEGYRDPSAPKFFHPGMRYYSVDVNKDTSDNNNWVEHEFPLRKERESDTYIWYYKNKLYVFETLYIHYYEYNKNNNLWSNAFELAADATKRWSTEDGINWKEEKDVDFSKLKIYKTIDNYTVPLLSYEPPDGTPLEPSYTELNGKYYRTFNSTYPMPPIKEIMETVDRFETNFTVTEEHIKKSGYYQLQVSSVPPDKAQESDWVNVVPNNQTTSSIGWESGGADLFTFNNKIVRLVDYDRQFKLNTQYETALNLSQKYYALLQAAKTMEDYKKYDYYFLYYKAMADMLKIIKDNGSDYFRPDEAVTHYTFEIN >gi|343386785|ref|AEM22275.1| hypothetical protein, 1876499..1876615 [Brachyspira intermedia PWS/A] MIDNRIKNLYYWLGLAWLGLAWLGLAWLGLAWLGLAWL >gi|343386786|ref|AEM22276.1| FrvX, Cellulase M-like protein, 1876876..1877943 [Brachyspira intermedia PWS/A] MNDVLNLMKDLTNAFGPSGFEDDVIEIIKKNTSFIDNERDSINNLYLGLQKIDSSKPIVGLDCHIDEIGFMAEHINDNGTISFIPLGGWHIPNIVSNSVVIKSSSGEYVKGVIGSKPPHFMTDEDKRRLPTLQDMYIDVGTRSKKETEEIFGIQIGDPIVPDVDFRYDDRTKSICAKAIDNRVGALCVIETLKALKDEKLDVNLVGMMTAQEEVGTRGAAVAANKVKPDLVIVFEGSPADDTFYYGDRAHGAIGRGSQLRVIDGGMITNPRLNKYTIEIAKKNNLAHQVIVREKGSTNGAVYHKTNLGSPSVVLGVATRYAHSHYCYCSYDDIVASVEIAKALIKTLNKEKIKEF >gi|343386787|ref|AEM22277.1| hypothetical protein, complement(1878459..1878893) [Brachyspira intermedia PWS/A] MDDKDIMDPNVYQIKENDWKVEENGNIITYKLLAYKLSSWSEDTYLVVKVNKENNSKEIIIDWNSKDFVFAEHKAFFRFDDDLPDNLDCKAGENRLSSIVLKPDYVYDNLLDCNMLIIRASLEKSKTTRMFDVSKFRDIVKNKL >gi|343386788|ref|AEM22278.1| sialidase, complement(1878966..1880081) [Brachyspira intermedia PWS/A] MKINILNENVIFENENLYPAFPSIIKLDNHRCMVSFRTAPKIKKNYSHLHSLSKAMLAIININKNSVEKVFEFGEYDEAAKQDAQLFRIDDKTIMAYYFRYTFHPMNEKELFKDYTFIEYNNTIALLSGIGICISYDNGKTFSKPYIIEADNMKHFAVRGSICKINNEILLPIYAYKKNINKNNCKYQCHIISSKDSINWKLKTFLCETEFKKINGKKSRIEYVEPSLLNYKNNIIAFIRTHINNEYGVTSISYSNDKGKTFSKPMFTDIKGYPLNPLILNDGKLLLTYGYRLKPYGMRAIVFDNADDIFDIDKINYKANNEEIIIDSDMKSTDCGYPWCIENNGIISCVYYGYKDKNKIRKIYMKRFTLI >gi|343386789|ref|AEM22279.1| hypothetical protein, complement(1880185..1880955) [Brachyspira intermedia PWS/A] MKKLILSAMLIFTLSTTSLFSQNIGEPTGNAFLDYMHGRSLFGINFGPTLYAGLFDIGIGIMEPTFQNVINDFTGGNAGAYVDTKLKHYAFGLGFSYDFAPVDFMTVGLDIGFAVGEIKMDRYNVSFSTVPWSLNVKFFFWRNAPFGFFLSPRFGGTALSISGSALKEGGISDIYSHGGFYMSLELGWRIQLFPKTGANWPVQVGIDISLFDIGYYVAPWTSPLFEISHLASFKQYEPFANIRALLLPRIGITLRF >gi|343386790|ref|AEM22280.1| TPR domain-containing protein, 1881135..1882379 [Brachyspira intermedia PWS/A] MNKKNRRKINNIKRRKKYHKKNIKSNKIKNLQESITNKAKEYINEENIQKIKDTAGKGFEKAKNFTSENIDKFQKYLDEQNFKGKLQNMANAGMDKIKEHSKKRYISRLFIFFHKHYILNFSILFIVAILVFRNIYINHNREIEKSLNYSITNYAPSLDNIIIAKEDYYTNTIIRQISSNKTSTNNIVLKSSSINDLEATLKNVLDNYNKNLQTSLNETIKSSNTVINFWFAFLSVIIIIFTLVGIIINNRIIKTSKKRINKFNREYNKKLNTMKKQVIEFKKLKKESENNLQINSLYNLANTAFDNKDYNTSISYYDKVLELNNSFAHAIYNRAIAYYYVNNHTKCAFELITLYNNNKSNEIKNLILKNIIELANNNIEIAILFCDNENIDYKSLQQKEEKQSLFERIKNIIS >gi|343386791|ref|AEM22281.1| N-glycosylase/DNA lyase, complement(1882380..1883057) [Brachyspira intermedia PWS/A] MDKEYAKHLMGIYKDKVLHERMKRRLEYFERVFKRDNDKRLFAELAFCICTPQTKARSGAAAIIDLYNNNLLFKGSAEKVANILIKHVRFHNMKAENIVLARKLYFPNEKFVLKDRINEALKNDTMVELRNELAKEVKGYGLKEASHFLRNIGFGQKIAILDRHIMRVMDKLSILPEGMTPKTSLTKNNYLQCESNLVEYSKSEKIPMEYLDFVFWYDATNDIFK >gi|343386792|ref|AEM22282.1| hypothetical protein, complement(1883143..1884840) [Brachyspira intermedia PWS/A] MIKNLINKKLYLILLLLILIIVLMISCKKINILGPNNIPPPTDFRLPEDTIPGHIDVNPVPAKNGEVFGGFSKKFKYQGKWYILADYMYNYDPKSKTLNQIDKNIILQIDDNGNINVYAKNVNYDTFSRLKYNISVIENDKIIYEPYTYGGFSMLHIPVDYELIITSILYDSIYYTSSDLLNWQTNGSTNNVRYQMPSPNPNNPNESFQGKFGMNVSDFFQFKDYIYLMGLRETFLEQNPTGYRNVDLGPYTVSKNYYYRIHKSKDISVGANWEKIDNTPWGERDSFIIRYDKDKIYVTGGDRYYYKHNPSINKWEIVIERFVDDKRIWSTTDGLNWTLEPNSDAYNKSEFIYYNPFKGLDRYLQNRVRTPEEPNWIKLDNGIYYKSDNIYSSWNIDGKEYYYPEPPYAEIDAAYNRGEEYFTVSETHLKGAGKNQFFAAREKPNESDSWKLITPIDYTDNLMVWQSGGEKVLLNINNKVIQLVDYYQIELMLKSPPIQSYPDVINDIRRTAKMYRDGTHPYGKDILKAMYNDARADIVEAYMKNYKEYIMPDEAVTHYTVEFKY >gi|343386793|ref|AEM22283.1| hypothetical protein, 1884873..1885028 [Brachyspira intermedia PWS/A] MIVYIFEKILGKFFLMIDNKPSSYYWLGLAWLGLAWLGLAWLGLAWLGCDS >gi|343386794|ref|AEM22284.1| putative exonuclease, 1885296..1886366 [Brachyspira intermedia PWS/A] MAKLLISSDLHLSVQEKEYSLSVLDEIIEYAKDYDALMLLGDTFNTFEDLQELKDIFSKKMEDYQKDVYLLKGNHENLKAKGITLSKLKFPENVIVIEDISFFNIDNLDIIALPYSEKYIIDNDINKKIESLNADNRIVIAHGIVEGTLWAIEENEESASIPIDIIKKIDPNIAIVGHIHKQMEVNIENIEIIYTGSARVWRRTKSEMGIRRCLAIDSANNSIKKTFINIKNAGVYRVYESNIYNISNIEQKASEWDINDIIDINIYGIAEDENELDEKINNIKNKYSKYVRDFNIKTSDIFLLENAYNESIIKEFLSIADEYEFNSNNEEDLEIVELAKRIGIEKLYTALQNNKR >gi|343386795|ref|AEM22285.1| hypothetical protein, 1886400..1888562 [Brachyspira intermedia PWS/A] MILNLNKFGKFKNKSFEISDNLTLFYGENESGKTTIFDSLMLLFSENKKTSSFAKQIKLRYGDDIDINTEPEIDESIKLHPQSYNNLYSIRQSEIIFEMSDSKKDSKDWESEIKKKLFASDIDVGKIISEIKAEHSGKSQTAIPAQLKNTKYRNEEIKEELNDLYSKANTEVNKKDKLKELDELLKETNSILKEKIDEYNKLNALREEKNKAKEKNNLLNINTMINEFNKKDQFIKENINLQKDHSKTINDLSGRIDASENKISYLKGKIESLQKSSEERNKTDYQSIMLRIDKAIKKIDALKEKNNKIPKIVFLAAVVLISALLSLYFKNPYWFLIILPSIPFLLIKEGKNDKFINDILDSLPELDIASDNLELSALKDILLRELAKIELILEKNDDEELDNYKKELEEAIINLENHQKELNNFFNKLNVKNKENYYEIKSNFDNVYKSTEELFKKLMIEAKKFGFKDIKTLEANCNRILKELDEKGVNPDDFNEMEMKALENKLRELEREINSIKENMNKVISNASYIQGELNSSDDVHKEIINLESEFAENNEEIKNLNKRKKALELLENMLSKINKKNDDIFNSLSNDAELLYNHITGKSLSDNGISMSGFDKNKIMVKDKQNEMRNVELLSSATKDAVYIAMRLSILSKIHETGRLILLDDPFITFDNNRTKEALSFMREYSKKYNIPIAIFTKDVFIRDIMKNYKEAIIHELSK >gi|343386796|ref|AEM22286.1| hypothetical protein, 1888647..1889744 [Brachyspira intermedia PWS/A] MKRIGIYIDLENVSHLSYEVNFEQMFNNIFSFYKNNLKDKEILYSIKKAYGDAKSIKKYSKKLRDMHIDIIYSVPVNKAKNMADMISSIEAFEDFVINKKIDIVIFVSRDVDYTVVMDRLSRYGAIVGIVTVFDNAKRSIFKNSCNHIFKIEDYKLAEKHENETKKEENNIDKMEFLTFFYNRVLEIYNIQNTETVKMSISDICNKINEDFNFEKGKSAIEQTQFKKMKNVLKYLNNNGIETAINNDDFYINQINTFKNVMSKILNLTSNEISEKNFILAFKEIISNYEENAVISLANTMNEINKKFKIGNNSSAVKNTKFKKPSKFIDYIIKKDIPIELTNKGNAFIMKDKNKVLEIIETICNE >gi|343386797|ref|AEM22287.1| Prephenate dehydrogenase, 1889803..1890633 [Brachyspira intermedia PWS/A] MGLMGGSLIKALKHSNQNYNIYAIDTNKENIDSALKEGYILKGYSNYDNIKEFIELSDIIMICTIPSIAIDIINKYKHLIDNNKILSDFCGVKTDIFNNTKDKKYVGLHTMAGKEKGGYINSSETLFKNSNAIIVNNENANENDINIIEKLSKDIGCNKITKTTAQKHDEMIAFTSQLMHIVACGIVNHDHFLPSLGFEGNSLGDHTRVGTIDANMWSELFLYNSDYLYDSLDKYIKCLDDFKKALKDKNRDELKKLMQHSNNTKKEWIDIKNNSL >gi|343386798|ref|AEM22288.1| TM2 domain family protein, 1890708..1890911 [Brachyspira intermedia PWS/A] MEVSDRSWVVTLLFAIFLPVHRFYVGKIGTGILYWLTAGGFGIWYIIDIVMILLDQFTDKEGRKLRK >gi|343386799|ref|AEM22289.1| homoserine kinase, complement(1890975..1891913) [Brachyspira intermedia PWS/A] MNKSQNKKLVTFKIPATSANIGSGFDSVGLALDLYNEIHIYSNDNSKKIEFEISGEGENEISKDNNMILDAMKLVYKRLKSKPDKGYIIKCINRIPLSRGLGSSSAAIIGGLLSANYILGNKLSIEDDILNMSVQLEGHPDNVSPAILGGIISGVVRKDEDFKYVKIKPPKDLKAIVAIPNFYLSTETARNALPKEITFKDAIFNISRAALLTSALSSNRLDLLEVATDDKLHQDYRAKFIPGLKDLFKNTKAAGAYSVTISGAGSSILSLVKNDEKIIKKVSEAMKSSFNKKKIDCEIKVLNIPQKGVIIK >gi|343386800|ref|AEM22290.1| threonine synthase, complement(1891916..1892971) [Brachyspira intermedia PWS/A] MKAWKGLLREYRKYLPITHQTPLITLHEGNTPLIKAERIGRDLDIELYLKYDGLNPTGSFKDRGMVMAVAKALEGRDTKAIMCASTGNTSASAAAYAARSGIDCIVVIPDGNIALGKLAQALMYGAKVIAIKGNFDEALKAVVDITNKYPITLVNSINPFRLQGQKTSAFEICDVLGKAPDYLAIPVGNAGNISAYWMGFKEYKENGNINNLPKMIGFEAEGSAAIVQNKIIENPQTLATAIKIGNPASWKLAVNAANESEGFIDSVTDDEILEAYKMLTMEEGVFAEPASAASLAGIIKSRKAGKINKGDTVVSVLTGNGLKDPDNAIKICNEPIKVDNNIEEIRKAIGI >gi|343386801|ref|AEM22291.1| DNA segregation ATPase FtsK/SpoIIIE-like protein, complement(1893209..1896799) [Brachyspira intermedia PWS/A] MGLFKRKLTIQKRAEQKKFEQRSENQNFDDYIQEEYENRNPFFDIMGFLCLLFAGILLLSYFSMNMEDLNSNNEIKNLLGIFGAYISSYSFLAFGFASYVIPAFFIYAGVNIILKNSTDRILISALSSSILMILLSILLNIFLGSLDFYNKGGMLGEFIGGSLVSIFGKTGAVMIVIAGLVITAIIFAKLSIMDLVNYFRNMMRNVDFEKIKDIEQKVVNGIKDLEIKSIKNTETSLQTDNKEKTYSRDYIPLFDTKEISELEFKTVPFIEKVENNNYSFDEKKYRENLLRRNNSVNSFFTKTDSFSKEAENLTNELKNMHFNGGININALENREEDLGLTLAEVVFGKEKANKNHPVRNSSMEMEDEFYRNYYNDFINKKKNEELEETENNDFNEFEGLDYNINYLKKSDFKRAAYDDSFNNYAKYNVEDQYIRANSVESYENYMYDYSNINNTNKEETNINENVEEEDSFEKLQRLVEENKRNKEIESNEIYEVHNNIDSIVETKKEEEKKEYVLTSNNVGNSINSSKKKKEAFEFGMGYASKREYNRADHIPNYNNHDNNNYIDSKIDEFDLDEEELYNADSNIEDIRLKTRIVSHENNINNENLLESNNNLNNALDNSIKEDNNIENHNNIIDTPILKESEEINETDKKIDNNETHINNAPQEEAGFINIESQKTVDTLKPMKSVIGTKSIKNFDSERIQSNFDTKYVDKHYKHPPFDLLNRSIPVNDGAMMESIKQTAMQLEHTLLDFNIEAKVTGVSRGPVITRYELEIASGIRVSKISNLTDNIALALASESVRIIAPIPGRSVIGIEIPNKVRNAVFLRDVLESTDFRQSKLDIPFVLGKGIYGNNVVSDMSEAPHLLVAGTTGSGKSVCLSTIILSLLYKFRPDELKFIFVDKKRVELSIYNGIPHLMSPVVSDEKKATIVLRYIVDIMEKRYERMERFFVRNVKTYNEKVRQLLKEGETEFNGEPLELFPYIVLVIDELHNLMVVASKEVEDLISRLAGMSRAVGIHLIIATQRPSADVVTGVIKANLPTRIAFQVPNKTNSRIIIDMSGAEQLLGKGDALFCASGSQMPDRVQGAFVSDNEVKKVVDYLSGQMSPMFDESLIAALEGSDADDKNTDEEDILDEELWEDAVQLVARTGKASASFLQRRLKIGYNRAARIVEIMERQGIVGPENGSKPREVLITLDE >gi|343386802|ref|AEM22292.1| undecaprenyl pyrophosphate phosphatase, complement(1896824..1897633) [Brachyspira intermedia PWS/A] MIKAVILGFVQAITEFLPVSSSGHLRITEYFLNFHAENILSFEVALHFGTFLATCLIFRKDIINAIVGFFSGLKDVKYASKNSEGFRISLMVIIASIPVAIVGLLLEQYLSNLDLQRIGLNLIITGSILLLTRKLDKNTYSNDLKDVFTMTYRNAFIIGLAQSVAIFPGISRSGMTISAALFLGLNRDLAGRFSFLISLPAIFGALLLSIKDIANFDITYALVGFFTAFVFGIIALKFLLSFLKKGKLFYFGFYCLIAGMAVFFYFLQV >gi|343386803|ref|AEM22293.1| conserved hypothetical protein, complement(1897755..1898384) [Brachyspira intermedia PWS/A] MEKNKLYFIIILLLFYLISCSKNNVQKGNFYSKVYTDVSFEASKSKAIDSIYYYIAKETSSIINRTDFNIVAVSLKDNNLIDFDNKDIANIKEYKKDDNFYVEIKVKDIDVYNRTLAILQKLKKEGSVEDKFFRANASIQMPDAGNLSAYTKQMLTQNALKRAYESLFKILRSNDIDVNRAVQLTNEAYILEESYSSNEYNVVVETILE >gi|343386804|ref|AEM22294.1| hypothetical protein, 1898473..1899216 [Brachyspira intermedia PWS/A] MNIKIFILLLTVFIFSSCQKKEDNFLEDMASLDKAYMDTLLIIRDVNNPNRKEAIEKFIVIWNDFKKQYYNSNTEDPQWKADFDSLQDILIRSHYYISSKEDESAGYSILHDIKYVLSDLRKRNNVNWFFDNLNSIYKIAYRIGELSKIYAGSNTTLSPEEEEKLIVVYYLLDDAVKTTISEFDKSNIHLLHLSQQQLGTLKHNIETIDDLVKSIGNDLFSKKYSNLSNISENILNIYFNSLQIIRG >gi|343386805|ref|AEM22295.1| pseudouridylate synthase, 1899256..1900113 [Brachyspira intermedia PWS/A] MGITSFDAIKQTKTMLKQKENILEKRVGHAGTLDPFADGVLILAFGRYTKLFFLFDDLNKEYIASGIFGESRDTDDIEGNTIKKSDNNNKLSFEELESIIKTNFKGNIKQKPPIYSAKKINGKRAYDLARDNKSFELKDVDVCIEKIELLEYDYPYFKIKTSVSKGTYIRSIIRDIGEITGNLAYTKELKRVSIGNYNIDMSCNIEDINKNKILSFFDMFKKFDKTIIEDESDIKQILCGNTKTIEDIKINNKYMALTDNKNNLLAIIEKNCTDKNNKYAFIDID >gi|343386806|ref|AEM22296.1| 3-dehydroquinate dehydratase, type II, 1900257..1900700 [Brachyspira intermedia PWS/A] MNILVINGPNTNMLGVAQTKIFGNITLGDIENKIKEAALGSAKVSFFQSNHEGAIIDRIHRAYDESIDYIIINAGAYAHTSIAIRDAFLATNIPFIEVHMSNVYAREDFRSKSYLSDIALGVITGFGDNSYILALAHLLSVEKRNNN >gi|343386807|ref|AEM22297.1| PepP, Xaa-Pro aminopeptidase, 1900721..1901836 [Brachyspira intermedia PWS/A] MCKLTLTESGENKKFNYDARLERLLKLTNENLLITKNENIFYLTGFKGSAGWLLISKGKKYLFVDSRYCEHASKVTHKTTVILVAGTYHDALAEFCKENNIKEIYTAKNGLYLSDYENIVASMVNNSIKIGISKADIDTIRNIKEKEEIKIIKDNLNRAEKAMTKMLAFVKEGVTEQELAAELEYQMRKEGGDKTAFDTILLFGERTSLPHGVPSERKLKLGDNILMDFGLSRDGYKSDITRTFFFGKGNNFEEMSKIYNIVREAHHKGIEAIHSGVSGKEVDNAAREIIKNNGYGQYFGHGLGHSVGLEIHESPRLSPLVDHVLEGGCVVTVEPGIYVPNLGGVRIENMAIVTKNGGVSINDTPTDLIVL >gi|343386808|ref|AEM22298.1| hypothetical protein, complement(1901898..1902572) [Brachyspira intermedia PWS/A] MFKSYKIIFISILFIVLSQISYANIGGFELIANVPIGAGITLYEPASKFKANGNFQIGVEANIGYMFNIKENMGMSLLGSLGYGFTGFSYSKNNDANFKSSVHDIYIGFYPKFNIQGFSIGINSGVKFDLASTSSIKTSSSDSKLETKIQPRTYIKGTFDYSLFFDDNNALNIGLYIGYDWGFAWGQTITDSSISSGDKYGNLDVGAQIGYRFGPRFGANILNK >gi|343386809|ref|AEM22299.1| hypothetical protein, complement(1902575..1903174) [Brachyspira intermedia PWS/A] MRYIKIFFILLIPFILTACFIPERRLYFSWNRPTEQKDPCNYEFNISSNMNLIETERGMMIDTDKEIYYRLNEEKPYNVEDYVYVMNEIISFMSNNKSCILVVEGHADIIGQGKGDRNLKLSERRASVIRDVILSSGFSHNRVKIFPYSDIMPKYTNDINKNRRVNFIALKCEMDLDNYEKYYNNYYTNIINQSNYMEK >gi|343386810|ref|AEM22300.1| hypothetical protein, complement(1903187..1904440) [Brachyspira intermedia PWS/A] MKKVYLIFFMMIIISINLYSQIIPTIDYKTFINAYIESTGMYNNIPKETLNILTDSKQMNQLFDDGIKSFTFGEILTIIQNPEKVLDTTTNESVILLVGTTLGFLEVANMQQGTATVVINALKNKAAFNAASGNNTGLLIPMHTPIGSFGINLYSDVPLLHINDIQNPPKRENDYDSLAKALDILPIPHINAYLQVNLGPVPLALTLRGGISLGFKEIYGAVVNDVEIESLGWNVGASLKAYLFRTKYFFGDLRFDFNYDEGNLKLAANNRNVYVPLYLGYNGGTDTGVVFNGNAFLESKWKTFALSPKLVFGFKMQEKVPVIQYLAAYFSVGADIIYGSLESKVGVNGIGSYANIVGHKITVDDLYVPNSQDKMSYQLYDMRVGFHFDIFYQSFAIEYGIFTKQFAVSFIPINIRF >gi|343386811|ref|AEM22301.1| hypothetical protein, complement(1904582..1906495) [Brachyspira intermedia PWS/A] MIVIIKNCIIILEGYIMKKNFINKNKKFYFLLLLLILIIVLIMSCKKVNLLGPNNIPPPTKFPIIDDNKPEIPDYPDPTPVPDPPDEGDIEEKPIEVKPEVVQNGTVFGGYGRRFKFKNDWYVLATNEYEYNPETKMLRQLNKGAVLRIEKDGKTITKIHGINSGDLEQTEYWKNLHSKKLVITDTEVRIPVKAESQGWATNWQYKIPDNVPNNIGYYWGYSYDEETGEKIEDIYKKITNDNFGYVEKLIIHYSNRSSSDLLNWKKASSSNVFDFPKPNFNNPSFQGRFGNTIENRIIYFKGKIFVFKLDFNFYNEYLTYYIEPNDEDFYWSKNEYYTIEWGKDMSDAKNWVTNHMINGLKIYGIWYDENKLYAEIQSSYLKRGYNDRWKLWTNYYVNGNDPKNVYTTEDGINWKEEPYDVMDKYKLKGAGISRGYDPASGSIINITNKMLGYEIPDGTPFEPSYTELNGKYYRTFNSTYPMPPIKEIMETVDRFETNFTVTEEHIKKSGYYQLQVSSVPPDKAQESDWVNVVPNNELASSIGWESGGADLFTFNNKIVRLVDYDRQFKLNTQYETALNLSEKYYNLLLNSPMSEFKKYDYYFLYYKAMADMLKIIKDKGNDYFRPDEAVTHYTFEL >gi|343386812|ref|AEM22302.1| flavodoxin, complement(1906777..1907334) [Brachyspira intermedia PWS/A] MSNKIAVLYKSKYGTTRTYAKWIADKLHGDLYGIDNVTFQNLDTYDFIVFAGALYAGKLSSAKGIKKFYKKLKGRKNLYCVIVGLGNPEDKELYNDYVNKNFHSDEKENMKFYFLRGSIDFDKLKLHHALMMLMLKRIISAKAVKTEDEKALLDNYGKKIDFLNKTSVEEIVVDIKNKIKELQNK >gi|343386813|ref|AEM22303.1| putative GTPase ObgE, complement(1907410..1909452) [Brachyspira intermedia PWS/A] MDQFIDVVSFEIEAGHGGAGSVSFRREAHVPMGGPDGGNGGDGGDVIVRVDARINSFGKIKSRKRFRARDGEPGRARLSDGKRGDDVVIRVPIGTVVYDEDTNNILADLLEDGQSYTVARGGKGGKGNKFYATATNQAPDYAQHGLEGEKLNIRLEVKLIADIGLVGMPNAGKSSLLARLTRANPKIASYPFTTLTPNLGVCYLDYERSFVIADIPGIIEGASEGAGLGLTFLRHIERTGALCFVIDLTDEDVADTYKKLRNELKQYSKELIKKKSIIVLNKTDMLEKDEIKEKVKAIEKAVKKEYKNNKETHYEEPEIFALSVFSLDGELLDKVTNAFYKANEERYDNTKKETKEPLLLNQNKNKSKLKTKRVFGPVVSKRLGNSLGIDVIPHKTCSYNCIYCQLGSEENTKTNLANYYSVDEIIYELKEALLNNKNIDYITFAGSGEPTLYKDLKKLIYEIKQITDIPVCIITNGSLLYKQEMRSDLLIADLVIPSLDAGNIDTFKLIDQPNKEIDFDKMVNGLIEFRRVFKGEYWLEVFLLKDINDSKEELDDIIKIVNKIKPDRVQLVTATRRTSNEKAKALNDEEMEKAKKYFEANCSIEIDVPSVSDKAKGNTKKITEEDIINFLIRQPDTVHMIAISFNEDESRVNELLKKLVESGKVREEMVNGVLSYAVNL >gi|343386814|ref|AEM22304.1| outer membrane protein OmpA family, complement(1910513..1911724) [Brachyspira intermedia PWS/A] MKKISLFVFIFSILIVSVLNSEITHKFYWNLEKGKRIESVKTADVEYYENGILTSTYKERNIVDLTVIAIAPKGGYRVSGVFKIFRMMKGEKVFHLDEEYTSDFIIHTNGKFEVPYNYFMPNVRHVPTFPDNEVKLTESWNRESIEIVKVNNAPNLTMALSSDYLFANVETNDDGSRNAVIQYHIMTDKDLLQAGLSRKGYPERIYGFNYGTFLWDMEKNIPVSQQERYQILFGYGRELSYASLQYKMNIISTYKIYDTITREEEEYNRKKLEDNLYNDDNVTIDTVPEGLVLRLGEILFDTDSYTLKPEAKNTIDNVIKAIKETYPDREIIVEGHTDNTGQKEYNQQLSEKRAKSVADYILPNLDHDKLSYKGFADDEPIASNDTADGRRKNRRVDIIIKLR >gi|343386815|ref|AEM22305.1| putative methyl-accepting chemotaxis protein, complement(1911752..1914532) [Brachyspira intermedia PWS/A] MAAISVGSYSILLKTIYQQSSSLRGYVYIFILFLALFTAVSMFFDCLKVEKGKSIPLGKIYVVKSGIAVVLVAIVSYTVYILDGSITLFEILNIRLIMVIFLISIAMAVSSIFFNILVRPLYKKTGGKEYYLPMVYNFLPVSMATVIFIVTLINGMHYRSEIIYDRQYDMMVKKGYANDFINNISDSLGKYVTVVDNIVAYMNIIYRNTYTLDTYTSLLSSYLSTRYANDNNISSVGIYFGDLENVNININTNGIDNLSINWKYDVNNLANINTNSRPNIAGNYITKLSTETNSLIDITPNADTFYIYNPILLNNRNVGFVTLEVRSSIYLDVLSDDTFKTNLNIFLTDNLYNIKASNNPSLIGDTQRDLDGSAVGVEIKNNKSTNYRNNIVNVNVISFDDSDTLVIKYPLFNNLYILNVWQHSNAYQNQLFRNTIIKASIAIYLGLLAFLLVILALILSLRKTLVFAKNVSESLSEGEGDLTIRLPVISNNESGELVHSFNKFLDKVKNIIVSVKNNAYTLTGNIQNMRASISISISDFNTIYKEFETELVNSNKIAESSANAARVSFMQRTRFTAVNETVQLLLENINDINDKMKQQSEAVTKTSSSVQQMMANIVTVSHGATKANDYAKILYTEAQEGSNIGESVVDSIQSIKEYSKQITNITQVIHNIAEQTNLLAMNAAIEAAHAGEHGRGFTVVADKIRKLAEDTGENSKIINEIIEETTQAIDHTVSLAFKSSESMEKILEGSNTLADLIATISGANDELDIGRREILMNISNLNNITEDVQELSLKQMQMSSAVSQNISSVDKLAEDVVNVVNTAETEMKELVNSIENVSNLSSTSSHNMETMDKRIKELQYIFLQLYKLVISFKTEKTEEDIAKEKSKTKVVDKKRIKLERKAEKARLKEEKRRLKELKKETSKVKK >gi|343386816|ref|AEM22306.1| putative methyl-accepting chemotaxis protein, complement(1914798..1917647) [Brachyspira intermedia PWS/A] MIFKSDENTLKRRLKFYLPALFIFAGVVSVAIFSILLKTVYQLSSSIISYLYIFIFILIAVFCISIYFDCLKLEKGKFIAIGKIYVIKAGLAVVLVAIFSYSLHIYLGKISIFEMLNIRLIMVIFLISVAMSIASTSFNILVKPLYKKTGRREYHLPIAYNFLPISIATVIFIVTFVNGMHYRSEIIYDRQYDIITKKGYANDFANNIADSLGKYVTVADNIVAYMNIIYRNTYTLDTYTSLLSSYLSTRYTNDNNISSVGIYFGDLENVNIDINTNDINKLSIIWKYDINDLANIETNGRPNIANSYTSRLSTETNTLIDITPNANTFYIYSPILLNNRHVGFVSVEVRSSVYLDVLSDEAFKNNLNIFLTDDSYSIKASNNPSLIGDTQRDFDSTAIGIEIKNNNYNNYRNNIVDVNVISFENTNAVAIKYALFNNLYVINMWQHNSAYRNQLFRNTIIRSSISIYLGLLAFLLVILALILSLRKTLVFAKNVSESLSEGEGDLTIRLPVISNNESGELVHSFNKFLDKVKNIIVSVKNNAYTLTGNIQNMRASISLSISDFNTIYKEFETELSNSNKIAESSANAARVSFMQRTRFTAVNETVQLLLENINDINDKMKQQSEAVTKTSSSVQQMMANIVTVSHGATKANDYAKILYTEAQEGSNIGESVVGSIQSIKEYSKQITNITQVIHNIAEQTNLLAMNAAIEAAHAGEHGRGFTVVADKIRKLAEDTGENSKIINEIIEETTQAIDHTVSLAFKSSESMGKILEGSNTLADLIATISGANDELDIGRREILMNISNLNNITEDVQELSLKQMQMSSAVSQNISSVDKLAEDVVNVVNTAETEMKELVNSIENVSNLSSTSSNNMETMDKRIKELQYIFLQLYKLVISFKTEKTEEDIAKENNKKALDKKKLKLERKAEKARLKEEKRRLKELKKENAKNKK >gi|343386817|ref|AEM22307.1| F0F1 ATP synthase subunit beta, complement(1917722..1919134) [Brachyspira intermedia PWS/A] MVEGKRGKVIQVVGSTLDAEFEEGHLPAILNALYIDKEIEGVQRHIICEVQQHLGGGRVRAIALESTDGISRGDDIFDTGNHIMVPVGTETIGRIFNVLGQTVDKGEPIVAKEYRSIHASPPKFETLEPKLEIFETGIKVIDLLAPYIKGGKTGLFGGAGVGKTVLIMELIHNIASEHGGYSVFAGVGERTREGNDLWSEMKESGVINKTCLVYGQMNEPPGARLRVALSALTMAEYFRDSAGLDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGALQERITSTKNGSITSIQAVYVPADDLTDPAPATAFTHLDATTVLSREVSEKGIYPAVDPLASTSRILDPNILGQEHYDVARKVQHILQRYRDLQDIIAILGADELSEDDKLIVSRARKIEQFLSQPFFVGEQFTGLQGRYVKLEDTIRSFKGICNGDYDDLPDQAFRFVGSIEEAVSKAKTVSN >gi|343386818|ref|AEM22308.1| inositol-1-monophosphatase, complement(1919181..1920074) [Brachyspira intermedia PWS/A] MLNDIIDMLTNGFSSKKKKSNFSENDAILNEIKDLSKSKLNKCLKDAEHIAIKAGKYSLKYFGCPKKVSKKGKTDLFTEVDLKNEKKIKEYLLKCYPKFGFYGEESKDNTSKKFTWIVDPIDGTSNFIHGYPFYCISIGLAYKGIPILGVVYAPLTDTVYKAHIKSKAYKNNKVIKVSSSNKLIESLIITGFYYNASVDDDFLHDRMVDFANMVKSTLALRRDGSAALDICMVAEGAADGFFEYGLSPWDICAGSIILKQAGGMVTGINMEEYDIFSKEQYIASNKKIHKEMVKVLE >gi|343386819|ref|AEM22309.1| Ttg2C, ABC-type transport system, complement(1920102..1920812) [Brachyspira intermedia PWS/A] MGKIKLKGDGYRIYVDYVFIGDLQENGKVSYRGGGIQIGFIEKIAINPDGTIRVTLFITDKNVIIPVGTKFSIQTVGLGLGEKYIMVSPPAINTTGMTSMAPNTIVKGVEPFSIETTLGSIGDIGKDLNFQELSAVVSNLAQTINLISGVIVSNESNINNSISNASATLGYINNIARDLSYVINDVEQGNGTIGAIMKDPQLHTNFNQIVDNLRVFSEKIKDNPSLLLFREPEAKK >gi|343386820|ref|AEM22310.1| ABC-type transport system, ATP-binding component, complement(1920932..1921711) [Brachyspira intermedia PWS/A] MSDIIELKDVYKSFGAQRVLNGVNLKVNKGETLSVIGNSGCGKSVLIKHLMGLLQPDSGSIIVDGQDINKISDNELTEVRKKFAMVFQGAALFDSLNVYENVSFGLRRIKKDIPEERIKAKVAEVLEMVGMPNIEHKMPSELSGGMKKRVGLARAIAMDPEILLYDEPTTGLDPVMSRVIDDLIVKMQSILNVTSIVITHDMTSVFRMSDRVVMLYKGQIIEGGDPDHLAETENPHLKFFFMSSIAKKGEDIESIRPKD >gi|343386821|ref|AEM22311.1| mannose-6-phosphate isomerase, class I, complement(1921713..1922690) [Brachyspira intermedia PWS/A] MYLLEFNEIAKEVIWGGNSLVSVYSKPFDKNKTIGESWEICDLPNDNNIVSNGELKGKTLSYLVKEYASELLGTKCKDDYFPLFLKLIDAKDKLSIQVHPDEEYASKKHNKHGKNEMWYVMETYGDAKLLIGLKENISKEDLKNALNNSKNIENMFNYFDIKKGDAFYIPSGCIHSILGNVVMAEIQTPSDVTYRLYDWNRVDKNGKSRELHIEDSFNVIKDINAFNLKSDKKNVFKDKKLEINTVFSNDYFNAEEYIINESYSSKTNGESFEIMMVLDGEGYIESNIADNVIKLNAGKTVLIPASLGNYFIKTDDIIKMLRVTL >gi|343386822|ref|AEM22312.1| protein of unknown function DUF523, complement(1922729..1923160) [Brachyspira intermedia PWS/A] MLVSACLLGLKCRYDGNDNKSDELLKVISMGYNLIPVCPEQLGGLSTPRKPAEIIKGRVINIDNEDVTENFLNGANEVLKLAKLYKTELAVLKERSPSCGFGKIYDGTFSKMVINGNGICADLLYNNGVKIIGESEIKEYFGL >gi|343386823|ref|AEM22313.1| hypothetical protein, complement(1923237..1923365) [Brachyspira intermedia PWS/A] MYVTISSKKCLLNYKKAIEVFIKLKDLYANEALMQFIFKINK >gi|343386824|ref|AEM22314.1| ribosome recycling factor, 1923630..1924178 [Brachyspira intermedia PWS/A] MSKESYKDRMEKAVSSLQNDLKGIRTGRANASILDGVKVEAYGSSMPLKQVGNVSTPDSRTIMIQPFDKGLVSDIEKAILKADLGFNPFNDGGNIRIVVPELTKERREELKKGVRHRGEEAKIAVRNIRRDENDKIKKELKDKTITEDESKSQEKKIQNDTDSYIKKIDDMITAKEKELDTI >gi|343386825|ref|AEM22315.1| undecaprenyl pyrophosphate synthetase, 1924175..1924897 [Brachyspira intermedia PWS/A] MITDEPNIPEHVAIIMDGNGRWAKSHNKSRSLGHRAGSENVINIVEACCELNIKYLTLYAFSTENWKRPEEEKKALFKLLKEFYKKEIKRLISNNILVKHIGDISAFPKDTIETIEETEKETLEKCKNPILTVILALNYGFRDELKNALKNICYDAINNKIDIESIDENFIQNYLYTKGIPDPDFLIRTSGEYRLSNFLMYQASYSELYFTDILWPDFSKENFKKAIEEYSNRNRRYGGL >gi|343386826|ref|AEM22316.1| phosphatidate cytidylyltransferase, 1924903..1925808 [Brachyspira intermedia PWS/A] MKKRLISVAVTLPLFLIVMFYDKVIFLFHIAILAISILSASEIFYMAKVHRQKNLRTVVATMIAMVLGYIITICDVNVFKGDFSNLYKIVETKHPSMDLSLVMVFALIAILFIINMFKVHVSTFEEKGRAILTAVFCFIYVGLGVWHISLMRFMPSGKYYIVFIMLCAWFSDTGGYIIGRKFGKHKLSNSASPNKSYEGLVGMFIFTIPLSILYYFLYSNGYLTCLLGKNIPNFSFPQLMLLTVIFTLTGFLGDMGESLIKRMYDTKDSSKLFPGHGGVFDIFDSVILTAPISYYVFLLIQ >gi|343386827|ref|AEM22317.1| extracellular solute-binding protein family 1, 1926096..1927394 [Brachyspira intermedia PWS/A] MLFIIISITIMSCNNNKQTSTTAAKLPAIDENTETEITVWAWNVAAKALMETAKAFNAKYPKIKVNVQEFGLAQNVYERYGVILSSGNGVPDVIQIESDYIQTYAETYPQYFLDMKDYITIDGVVDPSKIASSYDSTGKLVSIPWDSGPVVMFYRVDLFKEAGIDPNTIVTFDDYIAAGKKLQEKFPNVYMTGLPFTQDENLYRALLIANKSYYLNDKGEITVASQKAIETLQMIKRLIDEGVAKNVVNWDGSIVANKNGEVASYIIGGWWGGTIKDQMPEMKGKWGIMPIPALNQDAARASSSGGAGLSITATDPIKQAAALEFVKESLMNVDNQLMMYEKFSLFPSYLPAYDDSRFLKADDYFGDNFNKILADVTKQIPNVIYNSDDFAEVRNTVVSAYEDVLNNNKDIASTLNDAANQISSATGRAIAK >gi|343386828|ref|AEM22318.1| hypothetical protein, 1927710..1928459 [Brachyspira intermedia PWS/A] MKQNRGVLTFAGIENYKRLFTDQYFFISLKNSLIYLIIQVPIMTILSILLAIILHRGITKLKSMYRTAFFVPFIVESVAYSLIFVLLFQERGVVNFLFSIFNIGPIMWLTQTWPARIVIMLIITWRWTGYNMVIILAGLQTIPEDYYEASRIDGANAFQQFFYITIPMLKPVILFSTILSTIGTLNLFTEAYLLTNGGPNNSTITLGLYIYRQAFQSLNLTYAATISVAILVIVGVLSRLQMKFGGNNK >gi|343386829|ref|AEM22319.1| hypothetical protein, 1928456..1929289 [Brachyspira intermedia PWS/A] MNKNKQQKITRIILYIVLTIAMIACIYPLIFMFIAATRESGDIFLFPPPITFGSKFLENLKNLQERIPIWHALFNSLKIAIIYTVINLLVCSMAAYAISKFNFKGKNIVFVIIMLTMMLPAHAKLVPLYRMMTTLNIQNTHLAIILPDIAGAFGIFLMRQNFHSVPDTLIEAARIDGANEWTIFLKIVMPLMIPALTALGIYMFVAEWTNFTWPLIILNSPEKFTLPVALSQLKSDTRIDYGQIMVGAIFAVVPIMAVFLTLQKYFISGLTGGSVKE >gi|343386830|ref|AEM22320.1| amidohydrolase 3, complement(1929361..1930908) [Brachyspira intermedia PWS/A] MDKNDNIYESVAVENGRIAFAGTNEEVAKKFPNAEDIIDLEGKTVVPGFNDSCVNFVEYARFNTMLDLSKCMSIKEVLDLAQNAQKYEGWVIGWGWNQDYFEEKRMLTKNDLDNISNEYPVAFRRCCGEMIVANSKALEICGITEDMKSDSIDFENGLISSKDMILILSKIKSLEIDTLKSIILDTQEAFFKMGITSVQTDDLRSLPDFDYRKIIDAYQKLNREKKLKIRVCEQAQFINKKDIDDFRDYYYYQYINDERFKVARIKLVIDGGIGSRTALLREDYNDAKGFKGVSQYSQEALDELVSYANSLDYSLAIQATGDGAVDMALNSIEKIKNTKDFKYRRNGLVYAQITDKQLFERMKELNVGIYYQPIFLHYDMHIVEDRVGKEKASTCYAYKTAKDMGVHIGFGSSGPVDGISVMEGIHCAVNREDLNGWPENGWMPQEKLTVKEAVYLYTMGSAYMSSEDNIKGSIEEDKLADFVVLDRDIFEIDPKEIKDIKVLKTIVDGDIVYSA >gi|343386831|ref|AEM22321.1| hypothetical ABC transporter ATP-binding protein, complement(1930961..1932778) [Brachyspira intermedia PWS/A] MAKSIINIVNISKRFVHKVLLDNVNLLIEEKSKIGMIGRNGAGKTTLLKILMGLEEADDGEVIFSDDVRVGYLRQQGDFDDNEKVIDYLTRVTGKESWKCSKIASRFGIDHIKVNNNLGSLSSGYRMRVKLSEMMLYEPNFLILDEPSNFLDLNTLIDLENFLTDYNGGFLIVSHDREFLKTTCEKTIEMENSKITYFPGNIEDYFEYKEEKEYTIKKYNKNIEERKAHLERFVERFRYKATKAKAVQSRIKQIEKLKTIEINHPSKNVRIKLPEVPEKKGFALISDDLAVGYGDKVVAKSGRIEIARGSRVAVLGQNGEGKTTFLRTIAGRLNPVSGTYNYSYGIKIAYFGEDTYKNITSNDTVLSYLKKNAKQGLLTQELLTLLGSFLFSGDDVNKDVKVLSGGEMARLSLLAAITQCADVLILDEPTNHLDFETVEALANSLRDYGGTIFFTSHDRTFASLLADTIIEVKDKKLSLYSGDYEAYVYRVRLDALEEEEKELEYQNKNNSKESSSNDDKNSNNYEERKKIRNRLSRCESLLKKHEKQIEDYKKEEAEILKFFETSANYDDEKSKRLLEVKKLIEETENEWLLVNEEIDNIKAML >gi|343386832|ref|AEM22322.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase, complement(1932886..1934301) [Brachyspira intermedia PWS/A] MILDLNKTYIKVLKKQNILILGATLRSGVSIANTLYDINRTFNVNIKYALSDSKTEEQLKDSIEALKDKDIKLFFGNQDISILDNITLIIISPGIPHTIPIVEEAKRRNIKIIGEIEFAYNFIPNRNYIAVTGTDGKTTTVTLIHEIIKSYKKARLLGNVGNTFSKEIETIEPDEDIILELSSFQLETVEKFHAHIAAILNIAEDHLDRYRDIEDYFNTKKNIIINQNKNDFLVLNYDNIYTNIWYNELNGNSKSKLLTFSLKSKFATIYYNEEDEYIYYENEKLFSIANRKLIGKHNIANILAAVLICLKDGIPADNIEKVVNNFKGIEHRVELVSEINGVKYINDSKATSMNSVMSALKSFDKDIILIMGGRNKNIDFTPLNSIVNARVKKLILMGEAANVLSDMLHFDNKIIVRDLTDAFNYASSIAINGDTVLLSPGCTSFDMFKNYEERGKYFKSLVYKLSENLKE >gi|343386833|ref|AEM22323.1| hypothetical protein, complement(1935134..1936153) [Brachyspira intermedia PWS/A] MIENTVLNYKNLEEYFLFTDDSKLIKYNKKYNSYKDLIKIENINSKEEVTVLKLMYPYICITEEKGLNSAVVNIETLEVIYLKREDYHSEVSSYSNEFCIINNEIHLITQTKWNTLNIMNLKTKEMITDINRDEEKFGIDYFHSNLLVSKDYKHFLCNGWVWNPVDCISCFNIEEFLKEYEKCQVDVVNEYISGYNWDRPLAFIDNKRFVLACDNTNFNDEDFIYNQLRFYNIDDIKIDDSDNNEYRYLESYNSININLFSLDENNEVHGKLYFYKDNLIAFDFNKYSINIKSYNIKDESIKNIITIKNNNCFFNDVFGIIYYIENDTIKEIDVNNFII >gi|343386834|ref|AEM22324.1| cation efflux system protein, complement(1936242..1937114) [Brachyspira intermedia PWS/A] MSNEKKSKYMIIEGIVSVIINILLFAFKYAVGLLTGSLSIMADAWHSLSDCISSIIVIIGGIFSKRPPDEEHPFGHGRIELITSFIVGIMLVFIGYSFFSEAIQNIMNKKSASFTTMAIIAMVVSILVKELLAQYSFWGYRKSGSKSLYADAWHHRSDSVTSIIILVGILFGKSFWWLDSVLSILVSLVIFYAAFDVIKSSVKPLIGEYPSKETIESIKKIAEEMNIDNTDLNLHHFHIHTYGDHSEITFHMRFPKDMTVFDAHSKATLFENAIREKLSIEPTIHIEAYK >gi|343386835|ref|AEM22325.1| Malonyl-CoA-[acyl-carrier-protein] transacylase, 1937369..1938283 [Brachyspira intermedia PWS/A] MSNIAFLFPGQGSQCAGMGKSLYDNVAESKAIFDKAANILDDVDIKALCFEGSEDDLKKTENTQPALVTVGMAVYEALKAKGVKGNLFAGHSLGEITALSAAGYISFEDAVKIARTRGLLMAKAGADAPYGMAAVMGLDYDAVSKCMPENKEVVAANYNLKDQIVISGLLSAIEAVTPKLQEAGAKRVLPLKVSGAFHSPFMKPAADSLKEFLEKIELHNNDNKVLSNVTAEVHDFNSIKENLYKQMFSTVRWYDSMLNMQKQGITKIFECGPGKVLVGMTKKITPDITALPVFDIDSLNAAIQ >gi|343386836|ref|AEM22326.1| alkyl hydrogen peroxide reductase, complement(1938420..1938983) [Brachyspira intermedia PWS/A] MSLINKKLIDFKVEAYQNGEFKTVETKDVLGKWSVFFFYPADFTFVCPTELEDLGSVYEELKKINCEVYSVSADTHFVHKAWADATKTIANLKYTMLGDPTGVLGRFFEVFVEEVGQDLRGSFIVNPEGLIKAYEVHDMGIGRDANELVRKVQAAQYVAEHGGEVCPAKWKPGAKTLKPGIDLVGKL >gi|343386837|ref|AEM22327.1| bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities, complement(1939129..1940328) [Brachyspira intermedia PWS/A] MTIEQFNDEYLVSREGTNSEKWETKKDKRFNTDGLLPMWVADMEFKAPNEVIEAINKRVIHGVFGYTVLWDSYFEAFFNWQKSRYNIDLKKEWISFSIGVVTSIYWLVNAFTQKNDSIIILTPVYYPFYNAVKDNGRNLIECVLNNDNGIFSIDFDRLENDIVKNNVKMMIFCNPHNPVGRVWTDEEIDKTFDICKKHNVYIISDEIHQDINLGIRPFISALSIKNKDKYMDKLIVVTSASKTFNLACLLNSHIIIPNEDTRKIYNDYVNTISRTELSLLGMVAAEAAYKYGADWLDGLLKTIKRNYDYIKNELNEKVPDIIISPLEGTYLPFIDLRKVVNPDRVKEFIQDDCKIAVDFGEWFSKDYKGFIRLNIATNFEYIKIFTDNVILQLKTKNYK >gi|343386838|ref|AEM22328.1| conserved hypothetical protein, complement(1940454..1941473) [Brachyspira intermedia PWS/A] MFDYGYIPVIPMFIGIVIILIFIIIFLRFFPIGLWVTALFSGVRINMITLITMRLRRVNPSLIVLNQIKLWKAGLKIGSNELEAHYLAGGNPTAVADALIAADKASLDLSFERAAAIDLAGRDLVDAIRTSVSPRVIATPLIAAVAKDGIQVKATARVTVRTNINRLVGGAGEETIIARVGEGIVTTIGSAASHKEVLENPDRISQVVLAKGLDSGTAFEILSIDIADVDVGSNIGAFLQIDQAEADKKIAQAKAEERRVMAIAREQEMRAQVEEMKAKVVEAESQLPLAIAEALKKGNIGVLDYYNMKNVMADTEMRYSISGMDSMSKNNNASGNVKQ >gi|343386839|ref|AEM22329.1| uridylate kinase, complement(1941493..1942197) [Brachyspira intermedia PWS/A] MKKRVLLKISGEALLGQKEYGIDNNVVDRIALEMKEAGSDTEIAVVVGGGNIFRGMQLSDKTGMVRATADSMGMLATIMNAIALKDRFMAAGTPTQILSAFNIEGMIEGFERDKAIRILERGNVLIIAGGTSNPYFTTDSTAILRALEIGASIVLKGTNVDGVYDKDPKKNQDAKMYNEVTFKEAINQNLRVMDMTAFAMANDNNMPIRVFNMHTNGNITKALLGESIGTYVHN >gi|343386840|ref|AEM22330.1| GCN5-related N-acetyltransferase, complement(1942297..1942782) [Brachyspira intermedia PWS/A] MSDKKFSIRFASVEDIPTIMRFIKELAVYESLEHELNLTEESLKENIFEKKKAEVVIAFEDDVPVGHAVFFETFSTFVGRHGLYLDDLYVNEKYRGFGYGKKLFEEVAKIALSRNCGRLEWQCLDWNKSSIDFYLSTGAEMVKDARVYRLTNNALKKFLDF >gi|343386841|ref|AEM22331.1| GCN5-related N-acetyltransferase, complement(1942826..1943311) [Brachyspira intermedia PWS/A] MSDKKFDIRFASVEDCALILKFIKELARYEKLEHEVTATEEILKEWIFEKKKCEVLIASENSIEIGYALFFHNFSTFLGKAGIYLEDLYINPDYRGLGYGKKLLKEVAKIAVERGCERLDWQCLDWNKSSIDFYLSLNAIEMSDWNSYRLSHKVLRRFAEE >gi|343386842|ref|AEM22332.1| aminopeptidase, complement(1943328..1944452) [Brachyspira intermedia PWS/A] MKDSRIEKLAKNIVTYSCKLKKGEKILIKCYGEGEERNLVNAIIKEVYKVGASPFVWNHDPHILRELLKQCNEEQMKIWAKSDLMLMKEMDAYVGIWGGLNSSESSSVKMENHAIYEKFYLDPVHMKERVKNTKWVVMNYPTPAMAQQASMSTDEFEDFYFKVCNLDYSKMSKAMDNLVKLMNKTDKVRIVGKDTDLTFSIKDIPAIKCAGELNIPDGEVYTAPVKNSVNGVLSYNTPSLYSDGFTYENIKFEFKNGKIINATCNDTNRINKILDSDAGARYIGEFAIGVNPYITEPMKDILFDEKIMGSFHFTPGACYDDASNGNSSKIHWDLVCIQTKKYGGGEIYFDDKLIRKDGLFVIDSLKCLNPNNLK >gi|343386843|ref|AEM22333.1| hypothetical protein, 1944577..1945101 [Brachyspira intermedia PWS/A] MDYKMKNNILSIIFIIIFSSLLYGQNNAKDVEGFWAMPEKPKGRMKIAKIIVIDNKVYAYGIALHDDVKSTLDIHNPNKSLRDKDLKGLIFIYDIEFKDGEWQTGRIYHTDQGSTYYAKISLSDDKKTLFLKASLDKRGIVGATVEWKRLSKEESNKYSDIPVNKLRTIEGKGI >gi|343386844|ref|AEM22334.1| extracellular solute-binding protein, family 5, complement(1945105..1946730) [Brachyspira intermedia PWS/A] MKKNILIKLFCLFYAVFILSCHKEPKNILNELTVSVGPEPQTIDPTINSAVDAMIYTTHLFENLTIRDENNNIIPGAAESWTSSNNNTIYIFNIRSNAKWSDGMDLKANDFAYAWKRIVDPKNGASYSILLDVIKNASDIMMGKKDKETLGVKALDDKTLYVELEYPVPYFAEMVAHTAYTPLREDIVSKNEDGWTLDVNTMVGNGAFQIVRWDHNSRLVVRKNTDYWNYKEIKPDIINFEFIDNDNTAMSAIINEEIYFYHNTPINDREKLLKDGIARPVPNISLYFYEVDNRKEPFNDVRVRKAISLAIDREYIVNNIMKGGEKPAAAIVPYNIKDVDSTNDFRNKRDGYFSTKSEDYQKNVEEARALLADAGYPNGENFPVFEFISNPGFHITIAESIQAMLKEALNINMVIRQEEWAVLLQTRRDGNFDMARQGWIGGYNSPAAFLSLVKTGYVLNEGRYSNPEFDKALLNASIAENDSDRSKYMHEAESIAMNDMAIIPIYYYAGTVMQNSKLTNVIYDIFGIYNFSKAEIIEETN >gi|343386845|ref|AEM22335.1| acetate kinase, complement(1946866..1948056) [Brachyspira intermedia PWS/A] MNVLVINSGSSSIKYQLFAMPEAKVLAKGLLEKIGEEISALKHTAVEKGKEKKIEQKVADHKAGMSLIFSLLTDKEVGVIADMSEISAVGHRVVHGGEAFNKSTLITDEAIKAIEACCDIAPLHNPAGLQGISACKEILKDVKMVGVFDTSFHQTIPDYAYMYAVPHEWYDKYKIRRYGFHGTSHKYVYGEFCKAANKPNANVIVCHLGNGASVTAVKNGESIDTSMGLTPLEGLVMGTRSGDMDPAVPTFVMAKENLSAKEMDNILNKKSGLLGVSGVSNDMRNLEEAAKTNPKAELAITMFCYRVKKYIGAYMAALGHLDGIVFTGGIGENSAYIRGRILEGLDELGIKCDADKNSKARGCANFEKDGAAIKLYVIATDEEKAIAMDTYNLALK >gi|343386846|ref|AEM22336.1| hypothetical protein, complement(1948222..1948473) [Brachyspira intermedia PWS/A] MLFAKKQEITGTIRMVGTAIFPEIVITTEERDYYFDKQFFDEYARYVGQNMTIKAKVKKDTIWLADRSKSFDRYTIMWIEKKE >gi|343386847|ref|AEM22337.1| Peptidase M30, hyicolysin, complement(1948554..1949825) [Brachyspira intermedia PWS/A] MCEFMKKIFCIIIILILSIISCGKNSVTNPAKSIDGLIYPNNSMGQKTFKANYRKQGNKPYDFYKVAEYDKLIVYVMAGSGYNPESVDYIAKVFNDNYDEEVRIYGEHTDVDKNGKIIILLLELNADYSDSIGTGYFYGLDLLLNENNNAEILYMDIKMVNEKPEYMSGTIQHEFQHLINFNVNYIRNGRQMSTWLNEALSESTSILFFNQVKVDSRINEFNKATLGYYCFYTWNLPSESVYPNNPNSKYIFANYPSASVFMNWLYQKSGKNSSVFQNIAKYSSLVDYDRVLNNVSFTGASSWDDLLLKWIEGVANGEVEGANIEKQEENNNVNLYPGAIVAYDGTLSSSDNLVTRKLSSGLELALNKDIYTGYTPTSVSITIPKASSIQASKMYKTVSKDDKPYIPKYRHILFDKDGKIKEY >gi|343386848|ref|AEM22338.1| Peptidase M30, hyicolysin, complement(1949833..1951071) [Brachyspira intermedia PWS/A] MKKIFLMLFLLVILSSCQKVANILGVDIDSSLTYPDETMPKKTFNVFTFGVDGKAIRKTSQFYKVAEYPKLDIYVMASSGYKPENVDYIANVFNDNYAEEVRIYGEHTDVDNNGKIIILLFEINDSYSGAITTGYFYRADLILNENNNAEILYMDIKMLNDNPQYMAGTIQHEFQHLINYNVNYIQNNREISSWLNEALSESTSVLFSPTTVNSRIKEFNEVTYGYYCFYTWNLPSTMNVFANYPSASVFMNWLYQKNGKNSSVFQNIAKYSSLDDYNRVLNNASFTGASSWDDLLLKWIEGIKNNEVAGANLQLQKGGDTVSLYPGAAVAYSGSIQSSGNLVTKDFADGVQIALNKDTYVGDAPNSININIPKASSIQASKMYKTVSKDDKPYIPKYRHVLFDKDGKIKEY >gi|343386849|ref|AEM22339.1| spore coat assembly protein, 1951271..1952044 [Brachyspira intermedia PWS/A] MKKLSFIIMFIFLSTLIVNANTIEDEVLRLINLERSKESLPPLPNNQRLHSLALYHADNMAQKKFFSNTDLDGLDSKARQVKLYPEMVGNISESLHKLDVIPFTDKKAAESIVKDLMKTPDSRKNILSKEYNAIGVGAVKRGVGVYTTVTFANIVAESVDFSPTAKYESEITAKYRILNGAAFTDFKLAVEMADPEARITGDDGKTYIGKVIYDVKDMGNSILGRTFKAEYGKGDYKISILYKGQHFLSNVRTITVE >gi|343386850|ref|AEM22340.1| Biopolymer transport protein ExbD/TolR, 1952070..1952474 [Brachyspira intermedia PWS/A] MKFRRRFNIKSGIDLTPMIDIVFNLLIFFMVGSTIIVTPQIEISLPKSTSAVGSEKNDTVVISISKDGQKYINGYVSEDIDADLKKLADTEGELEKPVEIRSDQDVKTQVLISVIDSVKNAGFTKLSIATETKE >gi|343386851|ref|AEM22341.1| dTDP-glucose 4,6-dehydratase, complement(1952830..1953699) [Brachyspira intermedia PWS/A] MRKFNNILVTGGCGFIGSNFIRYILQQTEYKGNIINIDALTYAGNRENLLDIEEQYKSRYFFEKVNICDDKKINEIFNKYNPDCIVHFAAESHVDRSIYGPKDFIETNIMGTFILLEAARKLWENNKENKLFHHISTDEVYGSLGEIGYFYETTPYDPRSPYSSSKASSDHIVKAYYHTYNLPVTISNCSNNYGPYQFPEKLIPLMISNIVEEKDLPVYGDGKNIRDWIFVEDHNNAVLDIIYKGNVGETYNIGGENEITNIDMVNILCEKLAVKMNKDKNYYKNLSNL >gi|343386852|ref|AEM22342.1| dTDP-4-keto-L-rhamnose reductase, complement(1954586..1955440) [Brachyspira intermedia PWS/A] MVWIIGKNGMLAQDILQIFNKNNIEYIATASDIDITNINILNNFIKDKNIKTIINCSAYTKVDLAEDEKDICYKVNAEGVKNITEIAFNIKSDLIHFSTDYVFDGDNTKPYNENDITNPINIYGKSKLKGENYALSYNRSTVIRISWLYGIYGKNFVYTMINLMNSKESIKVVNDQFGSPTFTQDVSEAIFNLIDKNNYGLYHYTNEGNISWYDFANSIYKIGKEYNVINNDCKINPCTTEEYPTKAKRPKYSVLSVKKIKKYAKIYDYEYSLNNFFKAHKNKY >gi|343386853|ref|AEM22343.1| dTDP-4-dehydrorhamnose 3,5-epimerase, complement(1955559..1956026) [Brachyspira intermedia PWS/A] MAFTFIKLDIEGLFIVEPKVFGDSRGYFLETYSEKDFFEAGIKEKFVQDNQSKSTKNVLRGLHYQKKYCQAKLVRVLEGEVFDVAVDLRNDSPTFGKYYGVLLTEENKKQFFIPKGFAHGFIVLSNSAVFVYKCSDFYHPEDEGGGGYIMIIVLI >gi|343386854|ref|AEM22344.1| ABC transporter, transmembrane region, complement(1956195..1958015) [Brachyspira intermedia PWS/A] MRHKKLFIPSFILSVGYTIINILPPFFGQMAIAITGGKRVDLLDKIPFVSDLTAKFSNLDTKSLAQQFLNVDSIGNPVIMAQFAFIIIIGFIYVIFRVGFDYTKTFLFAFTAQEIGKDVRADMMKGLLNTDIAYFKQEKEGDLMSRVINESGTIEGFLSSTLPNMITVPLTLILTLCMLLILNVKLTLACFIAAPLIALGIDKVSKLIRTRVTAEQNLLGATTSVIQEDIRGIEVIKIFSKEDQEVNRYRTVYSELIKFMRKISLLTSLNRPMTELVMIVAMLIILAYGGFLIFKGEMPFEFLWGFLLYMLNISTPVRDLSGIVINLQRTMGIAQRVFQIMDLPSENVDDPNKKEMKPIEHSITFENVHFEYGKRGKEKPFHLGPVNFNVKKGDVVAFVGNSGGGKTTLISLIPKLFTPSQGVIRFDGIDINELNTRSVRNQIGVVSQENILFYGTVRENILYGKPDATDDDLLRAAKIAHADEFILKLPNGYDTHIGPRGVMLSGGQRQRIALARAVVKRPSILILDEATSALDTESEMYVQKALNQIINLQTTFVIAHRLSTIKNATYICVVENGKITESGTHDELMKRGGKYQYLYSLQFRDN >gi|343386855|ref|AEM22345.1| lipoprotein releasing system, ATP-binding protein, complement(1958207..1958896) [Brachyspira intermedia PWS/A] MSDNKEVLINIEKLKKTYAGPPKVEVLKSISLKVYRNEILAITGESGSGKTTLLNLIGGIDDITEGSIDILGNNIGKMNEGQLAHFRNSSLGYVFQFHNLLGEFSALENVMIPSLMLKYNKKEAKQKAEALLETVGLKDRMEHRIGELSGGEAQRVAIARALINKPSVVLADEPTGNLDKKNAEVVRELLWSMTKQSNASLIIVTHSVSIANMADRKLRLEYGENLIEY >gi|343386856|ref|AEM22346.1| lipoprotein releasing system, transmembrane protein, LolC/E family, complement(1958889..1960199) [Brachyspira intermedia PWS/A] MRLELMLGVRYLRAKKKFSFVSIITIICVLGILVGDMVMITVLSVMNGFQDDIRDKILGMRAHINISAYSDQPLTDYKYVVDNIMGNKEITSAYPYIVLPCIMRSYGFTTLITVRSFEDNIFTTDKDFIKYFNFVEGNNKNMNTNDALIGSEMAKDYALSIGDTIDIISASGSFDRGFKPQKTTFTIKGIYKTGYYEYDSRMVIVPLATGQKMVGYDNAVTGVAVKVRNFFDADKVAKKIDTDLKEFYNVMPWMLFDRNFFQALHTEKLMLALILSFIILIAALNIASSQIIFVKDKRRDIAIIKTLGLRPSNVAKVFFLEGAIIGLIGTVLGVIFGILLANYVNEALEGLRIIMQFIVNIIWFIPSKISAGISIPIVPDFFPSDIYYVSGGLPSIIHVSQVIMVASISFLLSVLFAIIPAYIASRYKPAEVLRYE >gi|343386857|ref|AEM22347.1| TPR domain-containing protein, complement(1960321..1961394) [Brachyspira intermedia PWS/A] MNCIDNLLELANKAFGSADYKKSLEYFDKLIFYYGDSVEIYNNRGLAKSSLGMYEEAISDFEKVISIDAEYVNAYNNIGLVKHNLGMYEEAIDYYKKALSLDNKCIQAFNNIGLANHNLGMYEEAIKYYIKAIEISPNVHTYNNIGLIKNDLGMYEEAIEYFNKVIRLDNNYIKAYYNIGLSKYNLKKYDEALEYFNKVLELDSKNIHSYNNIGIIKQDLKQHSEALEYFNKALALDKNYSKAYYNRGLSELELELYECALYDFNRCLELEPNYYPACCKRGEVKLKLKNYREALEDFNYYIEHSNPDKQIYYYRGFCKYKLKDYNNAIKDFNMSHNNIKTFLLKIISKFTLLFVKK >gi|343386858|ref|AEM22348.1| Dihydrofolate reductase, complement(1961542..1962048) [Brachyspira intermedia PWS/A] MIVSLIAAVDSKNGIGLNGVMPWGHIKEDMQFFRSTTTGYAVVMGRVTFESLGSKPLPNRKNIVISSSINNDLLEKYDNLFYESSFENTISKLLLEKNNQIFIIGGESIYKKALDYADIIYLTHIDKDYNCDRFFPQIDTKLFQSSKLKTFFHNDININIIKYTRTLL >gi|343386859|ref|AEM22349.1| thymidylate synthase, complement(1962045..1962845) [Brachyspira intermedia PWS/A] MQNYLELLREVLEEGEETKDRTGVGTRRIFGPQLRFKFEGNKIPIITTKRVFMKGVIIELLWFLQGSTNIKFLLENNVHIWDEWADDMGELGPVYGKQWRAWETKEGNKIDQISNIVNTLRNNPTSRRIILNAWNVGEIDQMHLPPCHMMCQFSVNSKGGIITHLYQRSADLFLGVPFNISSYAILTRLLAMHSGLHASELIMTFGDAHIYNNHIEQVKLQLSREPFNQTTELFIENRPNIFSHVYEDFRLEGYKYYPTIKAEVAV >gi|343386860|ref|AEM22350.1| hypothetical protein, 1963161..1963514 [Brachyspira intermedia PWS/A] MYKILILLLSFSIIIGSCQRKEIISIERGVVDHRFVGSWKLINGNEKYTFFNNNKIEYTSSNGQEKQIYTYEWKKEGDNYYYRLWNNELDSWSDFPIKYINTNTIKIYSDFFKKSYI >gi|343386861|ref|AEM22351.1| hypothetical protein, 1963551..1963814 [Brachyspira intermedia PWS/A] MDLLVIIFFIAIIIIFILMFGILFFVSGIGKIVDFISMIIFRNHEDCPFCKCKNSMRIIKTSTGYKKVCNKCKFSVEIDNNKNDGNK >gi|343386862|ref|AEM22352.1| Ribonuclease BN, Ribonuclease BN-like family, 1963965..1965689 [Brachyspira intermedia PWS/A] MAKIQKIKNFFKKLKIFFNEEIYYTDPKLFNPIQKFFLNSYRIVVFAVTDFFKDDCTIRAAALTYLVTLSFIPTLIVGLFILRIFNIYQNIFVFIFDWMEKNAPFYEPMVRQILNIADNTDLTSFGIIGIISTIVSVALILHSIQKSLIKIWRVKIKTSVPRVVANYIALLFLIPILIGISFTLITYTSISLHNLPALIKILLSWVTPIISTSILVLFLYVLVPQTKVNWSNATISSVLVAMAIITLFSVYFKLNIDVKNYKQIFDSDKYKIEYLVKEINTGNEEENINNNETIENENNDLTTNNTQNMLQKNTKIDVENIKSIKIERISYVIIENVGTGISATTYEKEPIDTNMLEFQTFSPNVSEQLLKYNFQIDDIVTISSENNMLTSIMPAELSSASSFAQIPVLLLLLYIVWNIILFGAELTYSIQYFRSYGVDKNSIKLSFAEKELIALEFMHTIAYRFIKKKKAITMYELAKELRTAPTIITEISEPLEKSMYVIKISNGPNISYSLGCQPESIRIGDILYCVRMEGGFRNKSIKTDDKYKNIIYQNREISKKDYNTNLLDLVKYKK >gi|343386863|ref|AEM22353.1| Histidine kinase chemotaxis sensory transducer, 1965834..1967588 [Brachyspira intermedia PWS/A] MYIVILLIYEPIYKENFMKDNINFMHNVESDISNWLLYFNSKIEVIKSYNTAPISKEDMLIAFGEILKDPGMVDLYFANDIPFKDGGSFINLLEASLPPDYDQTTREWFQGALKTTNFYVSAPYIAATTGEVVVTFAKAVYTNNALKGVIGMDISLKNLETISDKYGNENNATINIVTDKGIYLNHKDKNYLLSEQNTLSKNNLFSKYINDVTGKEIFYNLDNKNWIISMKIPSVSWICTSYGDNTKLNKSLAFFKILLLIIILLLILLETILVMVIARPISNSLNLVALNMSKMAEGNFHIKFDDKYNKKKDEMGRVVNSINDMQSHISEVISNFKQEINNINSDAATISNGSIHLSDRTSSQAASLEELASSIEALSNSLRDTSINSSKAKEVSTKAAEATKNGVEASNRTLKDMQDISEASKKISDITKMIQSIAFQTNILALNAAVEAARAGEQGRGFAVVASEIRTLAQNVNDAANEITNITSDTINKINVGNEAVELSAKLLGDIEAFVFEVSEDLSNITNAIIEEDDNITQIKMAVNSLNDITQENSYMAQESANLSKNVSEKTEAMVKDLEYFSLE >gi|343386864|ref|AEM22354.1| hypothetical protein, complement(1967831..1968736) [Brachyspira intermedia PWS/A] MIKKSLLILISLFILLSCAEHVAAPELYSIDVSLPYEELKQEIKENLKFYFEKEGSYKVVLTGTPSIKYDRTNSVAEALKNALIEMDIKDITIDIDIRYINYINGTLTERMFSPEIGNYISVFYNFIFPENRITTIGNRAFEINYSIKEIVIPDSVTKIDFAAFGGCHRLEKITLGKGIKRLDGEPFWPSDNLNEIDTSRCSSLEYIGRRICCQLPALTEFAIPASVKEIDRFAFYDCPNLTTIIYYGDSPNNIKFLDKNIFDNCPVKNLIVPNAINPDDDAWKTFGNANFTYVGREKPKQ >gi|343386865|ref|AEM22355.1| chaperonin GroEL, complement(1969401..1971032) [Brachyspira intermedia PWS/A] MAAKQLLFDEEARRALMRGVDALANAVKVTLGPRGRNVVIDKKFGPPTIINDGVTIAKEIELEDPFENMGAQIVKEVATKTNDVAGDGTTTATVLAQAMVKEGLKNVTSGANPMLIKRGIEKAVSEIVGYIKSEAKQIKGKEEIAQVATISANNDKEIGSLISDAMEKVGKEGVITVEEAKSLETSLSLVEGMQFDRGYISPYFVTNGDSMTAELEDALLLIYDKKISNMKELLPILEKIAQTGKPFIIIAEDIENEALATLVLNKMRGVLNVCAVKAPGFGDRRKAMLEDIAILTGGQVISEDLGMKLENAAIEQLGRAKKITVDKENTTIVEGAGSKEDVKSRVATIKKQIEETDSDYDREKLQERLAKLSGGVAVINIGAATEVEMKEKKARVEDALSATRAAVEEGVIPGGGITYLHAQHKLESLTVENPDEQVGVNIVKRAIEEPIRMIATNAGLDGSVVAIEAKKQKGNMGFNALTNEWVDMLKAGIIDPAKVSRSALQNAASIASQVLTAEVIITDIPEPEKPMPPMPGGGMGGMY >gi|343386866|ref|AEM22356.1| 30S ribosomal protein S21 putative, complement(1971219..1971437) [Brachyspira intermedia PWS/A] MSELVRVFANEGEPVESVIKRFRRACENEGILQDLKEKQFYKKPSLEKKLQREKALKRMKRKIKKERRLGLL >gi|343386867|ref|AEM22357.1| hypothetical protein, complement(1971691..1972626) [Brachyspira intermedia PWS/A] MCNRFDINIFDDIDILKELAKTWHAYYNFRMSCISLKNSEYLLSILSLILNPANHYEYKDIGMISYGILEEYHSKHKEFGILKEFLDREYNSEILSEIVTLLEGNDIVIDKKYDEDINYIDNLDLDPILKLLVYQKISYEYVKKYQSSFIICRVIFNIYSYKLKLLDTPILYPYQFFEASMNGASDKESIIRYLKFLRGICLYAVDTISFVHKNLLVLKNKLLLNKNFKKLTDSNVFSIIFITPYIRIVDLMEIFDWKRDKAARLLSKLREEGLFSETKVKKEKIFVNKYIIGLFESGENEKPEEFLNKFI >gi|343386868|ref|AEM22358.1| transcriptional regulator, 1972809..1973378 [Brachyspira intermedia PWS/A] MTPREQIVNAGKRLFKKYGFKKASMSDIALMVHKSKSSIYHYFKSKEEIFFAIAENEANDLKKELYEAIKKEDTAEAKLRAYILTRQKGYIKLANLYEALHSEIFEDFTLIEHMRAQYHKEEYNTIKMILRSGVKKGLFNIDLRLATEAILAIIKGFELEWAKNKNSELYEKDLDTIINIIFYGIVKRD >gi|343386869|ref|AEM22359.1| hypothetical protein, 1973356..1974972 [Brachyspira intermedia PWS/A] MESLKEIKNYNKFFFLYPLTYIIYITLSFAIGIAVAFKNNSFLNISIIISFILIVLSIILALKNKLNISIMILIFSCLFIGYSYTVIRYYDILKNPLSNFDRPIEAYNAKILSYDGVVGFRERYIAYVDKVYDGTNWYNYAGNIRIYNDSLKTLFINDEITVSSKINLYKNILTNNDIYNSKIIIEVLADRMLYGVASIYRYNNFVIQKNGFSIVNYINAHSIKIRNMIKKSLGSNMEAIPYSIAQGIMIGDKNIIPYHIRQYFIDSGISHILSISGLHISMILSILFLILSFFPINFYKRILISTIITIIIYPPITLFSVSIIRASIMAFCLLISYYFDRNRNSINALFLSGLIILLLNPNSIKDISFQFSFLATLGIIIYYPIFNFYIIKKINNINTNNKITNLIKNISIKLLAFLSISIFALIAVLPLSIHHFSILNITSLISNIFAVPISFIILSSSILTIITYQIYAPLSIFPSKTAKFFSSVLIELANKFSNLNFLKYELSLNLYSAVFITFIIVFIGIIIRVKINKSNSSS >gi|343386870|ref|AEM22360.1| hypothetical protein, 1975066..1975350 [Brachyspira intermedia PWS/A] MNKYILIHRIVNASIFMLFPIAAFYIVEHNNIKTGIYEAIFIIVNAVEILLFIAFIILYFKCEWGTRKHHALVKAGISFIVYLLIIIMTMAAIL >gi|343386871|ref|AEM22361.1| 3-Deoxy-D-manno-oct-2-ulosonic acid transferase, 1975371..1976633 [Brachyspira intermedia PWS/A] MQKFLMSVYTIFGYIFYPIIFIAFSIMMIFNKPIRKGALSRLGFIYPKENNKNAVWIHAVSVGEIVAVKEIIFTLIDKGYTIYLSTTTVGGYDIAKKNYGDKVELFYLTLDYPHMINKLINLISPEYVMIAEIEIWPTLIYSLHKKLIPLYMINGRIGKKEIKGYKNFKFFFKPYFNMYTKILAQSNIDKENMIYIGMPESLITVTGNLKYDITYHVDEKKIDDLENMIPVNKFVITAGSTHAGEEELILKAINDLGIKDKVYIVIVPRDINRGEDIQKLANKLDYEMPLYTDYDKTSEDGIIINTIGELLNWYKLSDLVIMGGTFMGTMGGHNILEAIYFKKPVIVGKYMYNFIEIYEYMKEAVLTCDDKVKLADTIKEAYQNEELRNNLADKAYNLLIQNNGASKRTIDIINKYQGIV >gi|343386872|ref|AEM22362.1| hypothetical protein, 1977275..1977805 [Brachyspira intermedia PWS/A] MSPKTAFEVGVIFNPRVTLNIDKYNNIHIGIDVGWYRDTFKFQTASQNFTHEFDTVMTGINFRWSPSLFLLGIGAGVKFPFLGKYWTGDSNVALNVGHFSTRFNNTVIPYISFYTGIDLYLVSLALYVNFDIPNMQIKDNLSSLGEGYSYPGKLASVDIGVQIGLHLDIFEFGENQ >gi|343386873|ref|AEM22363.1| hypothetical protein, 1978218..1978904 [Brachyspira intermedia PWS/A] MITIFIMTSALAYSNSLGLGLYIPLGGSIPSIYQNNNADPNLTLSPQSAFEVGVIFQPRINFNIGRKGIHNISIGLDIGWYRDTFKFQYDYQDFTHEFDSLMTGINFEWRPAIFQLGIGGGIKFPFTGKYWIGGNDTGLNGGTLSSRFNNPLIPYIRLYTGINLIVLSLSLYVNFDIPNMAIKDNLGSLGEGYKYPGKLFSVDVGVQFGIHLDIFKFSEKEREELLFI >gi|343386874|ref|AEM22364.1| folylpolyglutamate synthase, complement(1978940..1980262) [Brachyspira intermedia PWS/A] METNMNNMNEALDYIYSFMGKKTLHKNSFNHMNNVKGILKILGYKQIFKVIHITGTKGKGSTTLVLSKMLSSIGYKSGAFISPHIVNERERISINEEWISEEDFINITNKLKNIIDNNEIYSNVTVFEIFTIMGLYYFFIKGVDYACIEVGIGGKLDCTNIVESDISILTSISYDHMEVLGYTIEEITTQKAGIIKPNSVVISAYQEENSIKIIENISKENNCKLYVFKRDFNSEIILNSNEKLEFNYLENNKKYSFSTVLLGEHQAENISLSFKALNILLKADNNHTEKNINKAVKSLKDFSINARLTFMHKNPDIIVDGAHNSKSLERILNTIYKWYDDVIILFAPLSQKDIKNMSEVLKQHDSLIVLSSPDNIAHKEADSYKTYKYFKDNSNVKHIPNFHEAVENLKSINKINKPVLVIGSLYAASEFISLYKNKDI >gi|343386875|ref|AEM22365.1| valyl-tRNA synthetase, 1980503..1983157 [Brachyspira intermedia PWS/A] MKHTLEGSYTPKNIEDKLYNFWKENGFFHAVMDKNKEPYSIVIPPPNVTGVLHMGHGLNNTLQDILIRFHRMLGKCTLWMPGTDHAGIATQNVVERRLKAEGKNKHDLGREAFVKKTWEVANEHHSIIVKQLEKIGCSCDWDRERFTLDEGLSNAVREVFVELYNQGLIYRGKYLINYCPSCGTALANDEVEHEEVAGALYHVKYQIEGKDEYIEIATTRPETILADVAIAVHPDDERYANLTEQDVLILPIVGRKLRLVKDTYVDKEFGTGALKITPAHDPNDFAIAQRHNLEIINILNVDGTFNENTPANYQGKTVKEARALIIHELEKLGAFVGKDNIKHQVGHCYRCHNVVEPYYSDQWFVKMKPLAEKAYKAVNDGNTKIYPERWINTYNHWMTDIRDWCISRQLWWGHRIPVWYCDDCGEMMVSKTDITECTKCKSKNIHQDEDVLDTWFSSWLWPFSTFGWPEVNEELKYFYPTTALVTGYDILFFWVARMIMAGTHFMNDVPFKDVYLNGLIRDKIGRKMSKSLGNGIDPIEIIDEHGADAFRFTLSFITSLGGQDIWLDRELFKMGGKFANKIYNSAKYIFGNIDDNANIKDLDSYTLENKDKWILSRLQKAIESTTQKLKEYRFDEASQTIYKFYWNEFCDWYIEISKFDLKDESKKEKTIAVLLYVLEESMAMIHPFMPFITEEIYSNLPKHNIDSKALMIREYPKSNAKYIFEDIEKDFNLIQDIVSGIRNSRSSFNLPPNKKLDVIIRYTSDYFKNTAESYKDIISALSLTESLNIVSSAESERNKGSFVKVFEGGEINVNLIGIIDLEAEKKRLEKEAAGYKKDLEAVNKKLSNENFMKKAKQEAIDTENRKKKEFEDKLKGIEEVLSSL >gi|343386876|ref|AEM22366.1| Na+-driven multidrug efflux pump, complement(1983461..1984804) [Brachyspira intermedia PWS/A] MQLNNKVLKENSSKKIFINYAIPSMLGMLMESSAVFIDGLFVANFISSEAFSAIGIVWPITALSFALYVMLTLGSIAIAGKCIGENNMRRASLIFTQTLITVITLTTPVLILIYIFRETLLPLFGAHGNIYNFSLEYINGVIVAVFFWGMAYVFSQFIRLNGSPKFASLMFITSSLTNIILDAIFIVVLKLGISGAAWATAFSYIISFIIGFSYFFNPKCKIKIIKVYGGWNYIFKAILNGFSEFLSNISSGIIPWLFNITAYKILGNNGILIYSAANYIITFFIMIASDIGEILSSLISVSYGAKNKNKMKDFLKMGIIFVSSLSISASIILLINPNILVNALLKNIDSKTAEDAMFFVRSSIPIFICVGINIIMSAYYTSIQKAGASALIAGLRTLILPVLLVLTLPNILGFLGLVLVLPISEIITLIVSMALYKNRSIDILIRY >gi|343386877|ref|AEM22367.1| peptidase T, complement(1985419..1986546) [Brachyspira intermedia PWS/A] MKLAGILVDDLKTLGLKNIILNDNAIVTALLPKNKDNVHSIGFVAHLDTVDIGLDGNVNPQILNFKGDDFYLNKEKNIIFKVSEHNEINNYIGEDIIFSDGTSVLGADNKAAIATIMSALKYIIENNIEHGDIYIAFVPDEEIGLLGSKELDLNVFKPDFAYTIDSCEIGEIVYETFNAATAIINIEGVTAHPMSAKNVLVNPILIAIDIANEFDRKETPECTEKKEGYIWVQGISGNQRHASLRLSIRDHNKALYENKKSKVKEAVEKYRKLNSRANIELNLQDVYSNISDSIKDDRFAIDIMYEAMKNLNIDPKTLSMRGGTDGSVLSSKGLLTPNYFTGAHNFHSIYEFLPISSFYKSLQTTIEIIKIISSK >gi|343386878|ref|AEM22368.1| ABG transport, putative transporter family, complement(1986684..1988246) [Brachyspira intermedia PWS/A] MEKENVKENVNGKFEHFLKAVEFLGNKLPDITILFLIAFFIMIILSWILSHFTFNYFHPTTGEQIKIINMLAPNELAKFITKMISNFVSFPPLGITLVGTLGIGVANGSGFIRMIIIKISSVIPKKAVTPAVMFISILSHISSDSAYVILMPVAAMMFFSFGKHPLAGISASFAGLAGGHSASYTPSIIDPIMQGFTQNAARMIDPTYTVNVLCNYFLSFSSTFAVILVGWFVTDRIVEPFLWRTMPIDKDATVENTDISLVTKEENRAFKIAVLVLISMIILLIALLAPKNSLLRSPDGELTTPDAPIMQAIVPVIFLFLTIPGFVYGKLTNKFKTSRDFSNAMADSIKNLASFLTFAFFCSQFLYMFGNSNVGTLMAISGAEFLKSLNMPPQITIAGIILLTGVLDILISSASSKWAIMAPVLVPMLMAVGISPELTQASYRVSDSAMNIVTPMFSFYPLIISYCQKYCKKTGVGTLSSMMIPYSIGIFIALLIMLYGFWALNIPIGFNSGYVYPPVH >gi|343386879|ref|AEM22369.1| transcriptional regulator, BadM/Rrf2 family, complement(1988324..1988743) [Brachyspira intermedia PWS/A] MKISSRFTIAVHTLLCILEFKDEKMTSSLISDSVNVNPVIIRNILIQLQKADIITVKRGTGGISLNRKIENITLLDIFNAVESLDDNKLFSFHEHPNKKCPVGSRINDILQPKLDDVQHAMEKELKKTTLKDIYKSFKN >gi|343386880|ref|AEM22370.1| Lytic transglycosylase, catalytic, 1989131..1990474 [Brachyspira intermedia PWS/A] MLFASSCDTFDMYIRKALDGVNLYELSVFGESLGGDIKVVELRGFDVNNFRNDRVSYYINRYQGSWKNYMQKIIDRSQIYLPYIKEVFAEKGVPEDLVYLPIIESDFNPQAVSHAGAAGLWQFMPMTGAIYNLKVNYWSDDRFDPERSTKAAADHLVRLDKNFKSWVIALIAYNAGGGRISRAIREVKSNDFEDLLKAGVLPKETEEYIPKYVAAVIIAKNPEKFGFKVNKPKVVFPQGDLVYVDDAADLSVIAKMIDADTEDLKALNPHLARGVTPPGMVRYPLRVPEGLGEKFNETFAKIPASERVTFRRHEVKMNETLSHLSKFYGVPINAIVEINKLKSRSLNIGQQVMIPIQGLDNAKQVDLAQYEEEQQRIREGKFVYFESLPPPDYEYKDIMYHVRAGDTLWIIARRFHVDIAEIKAWNKLNSNVLSIGTEIFLRIPVNK >gi|343386881|ref|AEM22371.1| LPS biosynthesis related glycosyltransferase, complement(1990477..1991139) [Brachyspira intermedia PWS/A] MSFDRLDENKYDNYVRFPIWIFYNFNGLLDNKNYTKDDIKKVIDNINKAKSKKNKFASLVASHDATNIRTQIYNKIIKIDNINCPSKLFHNDDTLKTDFNNDKIEYLKEFKFNICPENTISDGYITEKLFDAFKAGCIPIYNGDENIELDLVNKNALLFFKKDEDNTELIKEIENLHKDDKLFDAFQKQIKIYDSMVDYLWDRRVKILSKLETLINERLK >gi|343386882|ref|AEM22372.1| GDP-D-mannose dehydratase, complement(1991584..1992585) [Brachyspira intermedia PWS/A] MKKALITGITGQDGSYLTELLLEKGYEVHGIIRRSSSFNTERIDHLYSDPHINDVRMFLHYGDLSDSSNLSRILEKIQPDEIYNLAAQSHVRVSFDMPEYTADVTGLGTIRLLDAIKETQIKTRFYQASTSELYGKVVETPQTEKTPFYPRSPYACAKVYSYWITVNYRESYDMYACNGILFNHESPRRGETFVTKKITHAIARILNKEQDKLYLGNLDSKRDWGYAKDYVEAMWLMLQQEKADDYVIATGETHSVREFLDEAFGLVGLDWKKYVEIDPRYYRPTEVDLLLGDPTKAKEKLGWQPKTTFKELVKIMLDYDLKSVGLSLDKFKN >gi|343386883|ref|AEM22373.1| GDP-fucose synthetase, complement(1992600..1993532) [Brachyspira intermedia PWS/A] MKKVYIAGHKGLVGSAIDRVLTKNGYNNILRKTHSELDLRNKEDVFNFFEKEKPQWVFLSAAKVGGIYANNTYPVDFLLYNLQIQNNIIEASYKYNVEKLMFLGSSCIYPKECTQPIKEEYLLSGYLESTNRPYALAKIAGIELCDAYNRQYNTNYISVMPCNLYGINDNYHPENAHVIPMLIRRFHEAKINNLKETTIWGSGTPLREFMFSDDLAEACLYLMENKSHEDIGKFINIGSGKEVTIKELAELIKKVIGFEGEIKLDSSKPDGTMRKLLDVSKINSLGWKYKTELEEGLKIAYNDFLKNYNK >gi|343386884|ref|AEM22374.1| putative Na+/phosphate symporter, complement(1993550..1995220) [Brachyspira intermedia PWS/A] MLLTLSFYLIGGFGLFMYGLKVFSDGLQESTENALKDILHKVTQNKILGISLGFLITAIVQSSSAVTVMTVSFVNANLLTLSQAINIILGANIGTTVTGWIISLNIDVLALPSLGIGSIIVIFGSENRKLRFFGEILMGFGMIFYGLILMKTAFEGVRGSEDFEKVFLMANADTMYGRFLCVVIGMVVTAIIQSSSAALGVTISLASVGLIDYPTGVALILGQNIGTTITAVLATLGASTNAKRAALVHCLFNIFGVIYMFFLFPYYIKLVDIIVGFMNIGDPNLIVDNKYVNISFYIAAAHTMFNIINVIVFYFLTEKLEKIVCFIIKEKEDEKHVSVLSDKLLNMPVSAEIEVRKEVTYMGDIAKKMLARIEQLFDNPSERLLTKIRDHEKMLDNTDQEIHSFLLKLLGKNTLNSANIASLINISTYYENLGDNLKDLGKAIIKGSEKKTLFNETQKEDIIKMLHNNKDFIDYLSGLILQYYSLNREKTYDEAMEKYHQIKGFYYEARERHYDNVDKSLIPALNAHLYGDVLVYFNRSIANLVNIVEAITGKDK >gi|343386885|ref|AEM22375.1| hypothetical protein, complement(1995454..1996104) [Brachyspira intermedia PWS/A] MSIEMKKIEDSNLFMMCKSINKNALSDIPNGYHIRNCKRDELNLWFEFPFDNEEDKKNYRNFMEQYFKDVYGSNEKLFFEKCLFICDDNDTPIGTCFDWKAYNSITTIHWFKVKKEYEGRGIGRSLISHVLNSIDKKDFPIYLHTQAGSFRAIKLYSDLGFVLLTDEKIGYRENHLNIALPYLKDKMHSEDYNKLKFYKSPKEFLYAVSTSAINQF >gi|343386886|ref|AEM22376.1| lipoprotein, complement(1996104..1996649) [Brachyspira intermedia PWS/A] MNKEKYKPQTKDELIDLIERKIKFDRIDTSLIIDMSGLFENSMLRNFKGIETWDTSKVTDMSSMFCGAKSFNHDISSWNVSKVKNMSNMFCFAEKFNQPLNSWDVSNVTNMENMFRIARVFNQPLDNWNVSKVKNIDGMFWVADSFNQNLDSWVLAKNAKMYMSFYCSAMQDNTPIWYKSE >gi|343386887|ref|AEM22377.1| glutamate dehydrogenase, 1996840..1998192 [Brachyspira intermedia PWS/A] MSSQMNEQLEAIYNKIVKRNPGEVEFHQAVKEVLSTLEVVLKKKPHYIEQKIIERICEPERQIMFRVPWMDDKGEIHVNRGFRVQFSSVIGPYKGGLRFHPSVYLGIIKFLSFEQIFKNALTGLPIGGGKGGSDFDPKGKSDNEVMRFCQSFMTELQRHIGYDIDVPAGDIGVGAREIGYLFGQYKRLKNRFEPGVLTGKGLGYGGSLARTEATGYGLVYFTDLMLKTNGKNGFEGKKVIVSGSGNVAIYAMQKATQLGAKVVACSDSNGVIYDENGINLDTVKRLKEVERKRIKEYVNAHSSAKYMENGNIWDIACDIALPCATQNELDAKSAETLVKNGCISVTEGANMPSTPEAVEVFQKAGILFAPGKATNAGGVATSALEMQQNASMDKWDFDYTDNKLKNIMTNIHNTCYETAEEYGFKGDYLKGANIAGFVKVADIMIPYGLV >gi|343386888|ref|AEM22378.1| putative flavin reductase-like, FMN-binding protein, complement(1998305..1998808) [Brachyspira intermedia PWS/A] MEKINLAKASLITSPNPVALVCINKPDGETNVTAVSWYTYLSYNPSMIAYAMNKDSYGGELVRENKKVIITIPSENIKEIVVGCGMYSGREIDKIRNLGIKMQSIPTSDIKIPLHSAAAIQCNLKEFIETGDHYLYICNVEEVYADYKEKPVFAWEGYSKIAAAKEA >gi|343386889|ref|AEM22379.1| hypothetical protein, complement(1999066..2000469) [Brachyspira intermedia PWS/A] MNIIEEINQLHENDEHEKIIDIIIEIPEDERSAELFSLLARAYNNIEKYDEALNNLMYIREEGIDDALWNYRVGYAYYYKGDRENAEMYFKKAYDLNNDDTDAYNFYMLCSEDKDDGINFEERVNRFWKWFEENEKVISDFIEQKSDMSSDEIIEFISNGVALISNNLQFVFGGNYEFTFTVEGKEYLFYFTPRIVAAMPEKLKSKWKFFPYMQKQDIANSNFRMYNKDLSFKEILVYPEYDEDTNFFNLKFYNKKLNELEEDYAYNAFYIMLEHAVGENIFKLYLLGNVEKSDKKLDGMIELTKLYDFIMDTLKNKNKEIILDPINRYTVYECKPTDNFFREDIFMGNTCYMELIDDYVNYNIDTIVNISKMGARAVYLTYVFSDNKDNDFNDENINQKLFDERNNISDELESMMGEKGSGKEIGIVLGSAFGILCGYIDLLLYNQDEFIKRAEEVLKNTIINLNY >gi|343386890|ref|AEM22380.1| hypothetical protein, complement(2000537..2001412) [Brachyspira intermedia PWS/A] MENKLKTKQIKYFNPLNDYFMRYMFAKEGHEHILLNLINSVRADYNQEIFEEVKVLNTFNLKETVNDKQSIVDVRAVTKSGETVLVEIQRVGNQSFVYRSLYYWAKGYVSNLRNNEKYNDLKQVIVINILDFNLLKDIDKEHSCYVIKELETNHILTNHLEMHFLELPKYLSSTSSLTDELNAWFCFLTIKEKREKMEEIMKMLVKKNPIMKEVYDEYNKFVDTKDLFENYAEYEKNYFDILALSEERMKGREEGEKNKAISIAKSLKKSGLDAKFISENTGLSIKEIEKL >gi|343386891|ref|AEM22381.1| hypothetical protein, complement(2001463..2001810) [Brachyspira intermedia PWS/A] MNNNFDEKIKPFFFVEHENTASLCLNVGEYKAEIFEEREDEGFEGSGYDWQSLALVFLDEKVPELRDVIDFDSEASMFCAYSSDIEALKKFALLFKEACEDDKLIRDLFSRAELD >gi|343386892|ref|AEM22382.1| ankyrin repeat-containing protein, complement(2002165..2002827) [Brachyspira intermedia PWS/A] MAAEKSDIMSIRNILNKKDVNINVQDRYGVTPLMHAVFNKDIYILELLLKNNANPNMQNDSGKTALIYASSTCDFDMIQMLIWYKADVNLTDNYKSTPLMYASSRDVNIIKLLAESGANMNAQNLDGKTALMYNILNKTSLDMVKTFIALGTDVNIQDIHGYSALMYAAILDYRELVEILIENGADVNKRNNYNKTALTMSEENKNYKMAEILIKYGAVR >gi|343386893|ref|AEM22383.1| DH:flavin oxidoreductase/DH oxidase, complement(2003038..2004072) [Brachyspira intermedia PWS/A] MKPEKSNLFTPLKIGNLEIKNRVVMPPMCMYSAEDGYVNDWYILHYATRAIGGTGLVIVEATGVLPYVSSITDGDLGIWDDKYIDGLSKLVNAIKSNGASAGIQINHAGRKCESAKVDKIYAPTAEAFNDKYRTPVEMTQDDINEVVDAFVKAFVRAKKAGFDMIEVHAAHGYLISTFLSPLSNKRTDEYGKNRAKILEEILRKGKEALGKDYPIQIRISSYDWKEGGNTVKDFADMLKPLEEEGLFDSINVSTGAVTADGKIIPYEGYQIPFCRELKQYMKVPCIGGGLITDPKMANMIVRNGAADAVYIGRELLRNPYWALQAARTLGIDVPFPKQYEQAKR >gi|343386894|ref|AEM22384.1| ankyrin repeat-containing protein, complement(2004241..2006901) [Brachyspira intermedia PWS/A] MIRNGFLLIILLFTISFNIFALTQKEQEFFNAIKENKYESQLKNLLRYKMDLNATNEKGLTPLLYAIECNNERAVRVLLEYNDVNIEAKLPDDFADYPYINKVEGDSFNIGGATPLMFAIFKSNPRIVKQLIDKGANVKARDNEGTPVFLYACGFGNGNIIRMLLVKDRTLVNDKTSNGNINGLHYAASLNNLETINFLIKNVDMNINDRDSNGCTALYYAAYYAKKEAYNLLIKLGANKDIGDNYGVKPEYVLSGGSSAVDLENNQEENNNSLTNTYEENMFIARTIQTSDTNALRNIMMYSNFNMNDVIIAYDTPLTYAIHLGKDDMVNQLFRYKMSGTNIINIETSFIPAEEVYFDESTNGIEFTGNVYLGNASPLQYAIFKGNTNIINTLLKLGADINRKDSLGNNALMYAASYGSAEVIDTLLNYSSNSYRVVDIYGDTPLHNAAALGNTNTLIALMNRTPININAQNIDGNTPLHFAVKNHNSNTYRFLLLKGADYTIKNYDGKTASDLLYGDGVESIESIISNNLNTNNVITNDIITNEIITNDIMTNNGSYSNFYTNEKLNNSKASNDLYGNTNFNNMNDTNNNTILTNSYYNMQYNNNIFDEVKVMQVNNFADDLIYEYSDDKTLDDENDDYVEPDTDDDYSHIYETSKPLFDAIYNGNIEEMLKAISNGVDINSRNEEGFTPLLYAINYDQLEAMKALLSYSNVIDIEMSLNNYTNVYSVKGENFSGEVLFNGTTPLQYAIFKGNTNAVNLLIESGSDMRKKDYNGYCSLFYASAFSNPDMIHFLLSKDSSLTREKSLSGRSVMHFAAMYGNNNAISYYLSNTFLSINAQDNDGNTPLHYANEKGYATTIELLVKSGAKTDIKNNEGLIASDLLKK >gi|343386895|ref|AEM22385.1| ankyrin repeat-containing protein, complement(2007056..2008351) [Brachyspira intermedia PWS/A] MNDNVYTNEVVNSNYNIDYTNEVEYDYNSNIKYNSLYEAIDNYDVEYVRTVISNEDININSKLPDDYPNNLGGATPLLYSIYKNAGEITEILVNNGANLKARDFKTWNSIMYAAAFSDLNTIALLAEKDSTLLDTKTEFNVTPLHIACDYNNLDTVMYLCTNSNIDINARDIDGWTALYHAAHSKSMETYNLLIILGADTNIADNNNVLPETVLTRKIDNEVNEVREIDIELFKAIEKDDSRSIRALINRGANINAKDGYGLSVLHLAIKNNSIRSVNVLLANKNIDLESKLPEGYFTHLGEDSSDAVYIGNATPLIYAIFKSKGDSRIVNELIKKGANVNATDEEGWSTFLYAAAFGNSSMLRNILSKNKSLINSKTKNNVTPLHMAVVYDNLDNIKYLVRNLKVDINAKDDDGWTALYYAAAKQKKRSL >gi|343386896|ref|AEM22386.1| hypothetical protein, complement(2008480..2011374) [Brachyspira intermedia PWS/A] MWLYAQDTNADNTIATNNNTISTNRGESAIMQINRFDAKRNPVSFINLVNFTPYYVLQEYARVNNIEIYPYDTESSLRARIIERQVNIKQEVIKGNDQVKEVARTTINKGGAQVELIGADFAERYAVEEAGEELISLYGNVTMKMYNNTLVADRVVYSLKTGEVFASGNITVKAEGSTLNGEWFMLNRENKKGILFNGGTKFMGFTVEGRVIKFNDQDFFAENSSVSFSRLTPVAHDFLASRVYLWDSKKMMVFNSIYRVGRQPVFYFPLFIQNNFGTGIITSFGQSLREGVYIQNYKIFDLYGVQHKVRFDAYQKLGFLIGDEIRYTSQYQNLALDAMFALGRQYYLLDSYITSSIGYGTRYVNYFASGESGKFVPRYKFQYDHTIQLYNSKNINSYVTGKLNLNSDLYFRSDFYNQRGQFDILTFFTSLTGELQDIGDSYPERYIENSVYVNNNIYGLNLKVGAEWDLEAVRNISVDVNTNFDYYMPKPYKLILPSVEASYSSVFGDETSYYFPNVNINYNLRANYNHTINYKTSEGIAFYNNPRLDSQLNDKLAERNNLNLYGDLSRTFTNEFIRFVPSVNMEYAYQNSISPTAEDLIYDKDNTYFGIGTGMNFSMFLPYSILPYNFTKYFEPTIRWDTTYSLGYRFKEKYIDNNYGNSQFGEFNNHNFTTKFSMGGTGYSLFYLPDLNLNMETFITTGYDFIPSYNAETKTYQVEFSTNKMLTTEVGASARLLYNQSYISYDITRNLLGTNLTANRINAYFHFPIPLGKITDWILIKNNKKPFFDGIVNDFNLYFGFSFTHDFINYRYNTAAFTFGIELQVLEQWKFRIATTSANENAYRYIKSYAEKENQTWVNPFWDIINSFNFSDSKKRTESLFKLKSIEASIWHELDGWQIQATFAVRPSTLPSDITSGSVKGVYWNKEFWIEFTLTDFPTVGLPKKEYNLNSTITDLQDSAASTQ >gi|343386897|ref|AEM22387.1| tyrosyl-tRNA synthetase, complement(2011444..2012640) [Brachyspira intermedia PWS/A] MEDKKYSIDESIELITRGISEVIGLEEIKEKLKSGKQLTVKAGFDPTAPDIHLGHTVLLRKMRHFQLLGHKVIFLIGDFTGRIGDPSGKTKTRPRLTLEDVLKNAETYKQQVFKILDPEKTIVEFNSKWLEKMSFADVLGLTSRYTVAQMIERDDFSKRYKNGQPISIMEFLYPLAQGYDSVSLECDVELGGNDQKFNLLVGRTLMKEYGLSPQAVITVPLLEGLDGVEKMSKSLGNYIGIYDSPKDMYGKAMSIPDSLIAKYMELLTDIPLDDIKNYVKAMENGENPRNIKGILAKEIVKIYHGEAEALNAEEEFKRIFSSKGLPDEIEEVSISKDDNILNVLSICMSSESKSNLKRLVSQGSVTLDNEKINDINAVISKEGILKVGKRNFFKIKFS >gi|343386898|ref|AEM22388.1| D Gyrase B subunit, 2013024..2014934 [Brachyspira intermedia PWS/A] MAAEKTYSSKNIQVLEGLDPVRKRPGMYIGSTGAQGLHHLVYEVVDNSIDEAMAGYCKNITVTIKKGNIIQVEDDGRGIPVDMHPKLKISALEVVMTKLHAGGKFDNETYKVSGGLHGVGVSVVNALSTELIAEVNKDGKLYRQVYHRGIPEEPVKEVGTSKKTGTTVTFKADDEIFETTVYDYKILANRLRELAFLNRGIRITLVDEREAEVVSNEFYYEGGIEMFIAHLNENKKPLHDKPIYLHKNEDKTDVEVAMQYVDAYNENIFTYCNNINTTEGGTHLVGFRTALTRVYTDFAKKLELDKKSKITFMGEDTREGLVAVVSVKIPNPQFEGQTKTKLGNTEVRAVTEKLVVEGLNDYFSQNPKVIKAILEKIISAAQAREAARKARDLARRKNALESDSLPGKLADCSEQEVDKCEVYLVEGDSAGGTAKGGRDRHFQAILPLRGKVLNVEKARLDKIIDNESLKPIIAALGCGVGASFDISKIRYGRVIIMADADIDGSHIRTLLLTFFFRYMRPLIDLGHIFIAVPPLYKISFDKKNFVYAYSDEQRDKILAENKDKKYDIQRYKGLGEMNADQLWETTMNPETRLMYQVLTEDAEKADQLFSMLMGDEVKPRRDFIESNARYVKNLDV >gi|343386899|ref|AEM22389.1| thioredoxin reductase, 2015027..2015998 [Brachyspira intermedia PWS/A] MDNKYDLIIVGGGPGGIAASVEASILEMKKVLLLEKGDNHSTTIRKFYKDDKRVDKDYKGEALDLKGNIKFKTATKGDVLDLFSECLFGNYIEAMFNTEVESIQKNGEYLEVNTSDNKKYLSKYVVVSIGKMGRPNKPDYTIPASLNNVVNFNIYKCKENEKVLVVGGGNSAVEYAYLLGKDNNVTINYRKAEFTRPNEKNLETIKEDISSGKVKAKLGIDITSIEDKDGKVLVHYTDGTEDTYDRVIYALGGVAPVDFLKRCNIELDANGVPMVNDNHESSVQNLFIAGDILYKSGGSIAKALNAGFDIVKYIDELMKKSGN >gi|343386900|ref|AEM22390.1| phosphotransferase enzyme II, B compnent SgaB, 2016026..2016328 [Brachyspira intermedia PWS/A] MLKVLVVCANGTGTSLMMKEKAQMALIKLGIENLSIDHCDMNHCKTGDYDLIFCPTSFLDSFKEAEQKGAKLIGIKNILSEEEFKQKLEESGYLDELKHK >gi|343386901|ref|AEM22391.1| ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component, complement(2016384..2017283) [Brachyspira intermedia PWS/A] MKNIKLILIMIFIFIGSLYSQEMYLLSGPTGIGGLKMMKDYRGVNIHFVNAPNNMLSLIVKGQTDIAAIPANMAAIIFNRQLDYKVIAVISETKLFIVSADNKIQTINDIKNKTVYCGTKLAAPDLMLQYLISKENLPKVNINYSLSNPDLAKAVASKNADIAILPEPFVSSAMLENKDVHIVVEMSKYVENYPVAVLIAKNSFINHNRALVQEVLQQYKKSTDYIINNKNEIESLIKDSSMIINAKSAVYGINRMGLTFYTGEKMKFALNSYYNFLYNFDKKLIGNKIPSNEFYYIEK >gi|343386902|ref|AEM22392.1| nicotinic acid mononucleotide adenylyltransferase, complement(2017329..2017886) [Brachyspira intermedia PWS/A] MKIAILGGTFDPPHLGHLILADTVITNCNYDKVIFIPAKIPPHKNISGEVSNEDRLNMLKLSIENDERFLLDEYELNNDGVSYTINTLNYLYKNYDIEGKIGLIIGADLIKDFDKWREPERIAEISDITVVNREDDKNLYKENIDKYNIKVIMAPRIDISSSLIRNRIKEKKDSDILLKKKFMII >gi|343386903|ref|AEM22393.1| UshA, 5'-nucleotidase/2',3'-cyclic phosphodiesterase-like esterase, complement(2018064..2019908) [Brachyspira intermedia PWS/A] MKRGYIVMSIFLSALLTNVSCNSKDKNRVYPEGEVNFTIVQTTDIHGMIFPYNFITDKEEDTSMAHVSSYLKQLKNEGKTILLLENGDSLQGQPTVYYYNFVAINEPHIWSEVLNYMDYDAVAVGNHDIEAGHSVYDKLAKELKAPLLAANLIDEKSKEPYFKPYTVVEKNGVKIAVLGLIEPAIDRQLPKVLYEGLATEDMVESAKKWIKVIKDKEKPDMIIGLFHAGADHTDDKETYKNENASQLVAEQVDGFDIIFVGHDHQGWSGLGYDQTSKQKTKEVKSPSGKIVPIYGGVNSARYIASVDVSMSYNKNNKTWNMKFDGNLLDPSQFESDKEFLEKFADARANIEKWVSRDIGNLNTKLVSDEAIFGDSYFLSFIHKLQFTIAEKELGEKADISFAAPLSKDAVLNNGVIKVKDMFNLYPYENFFYVMKLTGKQIKDAMEYSYGRWFNTMNNINDHLIAFKKDSSGKLIFNKRYNSYDTITPSYNYESVAGLNYTVDVTKPNGEKIIIESLSDGRSFELDKEYKVAINSYRGSGGGGHLTQGAGIDLETLQNMDLVLKSTDKDLRYYIINWFEEQNGPITVEKLNNWKVVPENYVKAGKQRDYKLLYP >gi|343386904|ref|AEM22394.1| hypothetical protein, complement(2019984..2020340) [Brachyspira intermedia PWS/A] MENLNLNDIEQIMTFYLIFNFVILACIIYIIISLIFRLLPKKQEEQSKDNKKNKSSNKKKKKDIIDLFWTEDKDSKTRTTIKRSVFIIFIAFTLYYIFNSINFIIANIDIVKKVLKIE >gi|343386905|ref|AEM22395.1| hypothetical protein, complement(2020366..2020704) [Brachyspira intermedia PWS/A] MKQHIIFNEKTTEEQIKVINEIIKNNKLSKLNNELEKILYNELKAGNEIREISVGGFGDEKHLFIFLNKTFITKIVKNDNNVKYIEVNDIHYWKAEYTDLVNKQTIACFFNS >gi|343386906|ref|AEM22396.1| peptidase, 2020845..2022665 [Brachyspira intermedia PWS/A] MSNENKSNTLIERKDVKIEDTWDLTLLYKNDEEFEKDFKAMEEFSKEVSKFKGNLSKSAAELKNILDSIMNASIILDKLGSYAFLKQTEDLTNNDSNIKVARFSKLASEFSANLSYFDPELMSIDDEKINTFLKDEVLKDYLIYLRNILKYKPHTLSEKEERILALQGELASTASNVFDTLNDADLDFGTLEHNGEKTTLTHATFSSFQESQDRELRKNSYNQFYKEYDKHKNTLAELYASQIKQDIFDAKIRNYNSVREMELFGDDIPVSVYDSLIESVHNALPALHSYYEYCAGKLGISDFRQYDKYAPVVKDVKIHHTFDKAIEVLSKALSPLGEEYVSTLTKGLNSRWVDKYENKGKTSGAFSAGCYTSEPYILMNFRDESVESVFTLAHEAGHSMHSYYSRKNNPFQHHDYSIFEAEVASTFNEKLLFNYFMQNESKKEVKAFLLNKDINGFVATVFRQTMFAEFEHIIHKEAEEGNPTTLELIRNVYKDLLKKYFGAKAVFEETSDLEALRIPHFYRSFYVYKYATGMSAAVALSNRVLEGNAKGDYTNRDNYLKFLKSGGSRTPIENLKVAGVDMTKPEVVESALKLFAKEVEELKALN >gi|343386907|ref|AEM22397.1| 50S ribosomal protein L20, complement(2022857..2023210) [Brachyspira intermedia PWS/A] MRAVSGVVRKKKVKKILNMAKGYYGSHSKQMKQAKEAVIRGLKYAYRDRRQKKRMMRRLWTLRINAACRPLGISYSKFINGLKKANVIIDRKALSNLAIDDYKAFEAVVEVAKKALA >gi|343386908|ref|AEM22398.1| rpmI, 50S ribosomal protein L35, complement(2023226..2023429) [Brachyspira intermedia PWS/A] MKQKLKTKSGAKKRFRFSKTGKVKFAHAFGSHKFLSKRPDTKRKYRKARIADDTNMLEMPRLMPYGR >gi|343386909|ref|AEM22399.1| translation initiation factor IF-3, complement(2023554..2024141) [Brachyspira intermedia PWS/A] MATVKKEGERINQFITAPEVRVVHDERGSLGVMSIKDALALAKSEGSDLVEIAPTAEPPVCKIINYGKYKFDIQKKSKEAKKKQKLVQLKEIKMRPQISIHDYNFKMKHIREFLDEGNKVKITIMFRGREMAHTEFGYDLINKIIQDLENEAATEKPAKLEGKNLSAVLNPVKVKKTDSEGSSNKKESSEVNNEE >gi|343386910|ref|AEM22400.1| threonyl-tRNA synthetase, complement(2024154..2026124) [Brachyspira intermedia PWS/A] MNANKSINSRGVIMSKINYLGQSYDLSNGESLLDFLKQNAKKDSKDAVAAKFNGTEVDLTYTPETDGDLELILTTSDEGLEILRHSTSHLMAQAVRRLYPNTQVTIGPAIKDGFYYDFDAEKPFTEEDLPKIEDEMKKIIKENIPVVRKVMNKNEAIEYFKKANEPYKVEIIEGIDADTVSFYEQGDFIDLCRGPHVPSTGYLKAYKLMSVAGSYWRGDSNNKMLSRIYGTAFESKESLDKYLKKLKEAKERDHRKLGKELNLFSFHEEGPGFPFWHPRGMVIYKAVESYIRNENEKRGYVEIKTPAILNEELWHRSGHWDNYKENMYFTEIDETKYAVKPMNCPGGLIVYNSNIHSYRDLPLRVAELGFVHRHELSGALHGLFRVRAFTQDDAHIFCTEEQLGDEIINTIEYYLSVYKDFGFENFEIFVSTRPAKSIGSDEIWELATKSLINALDKLKISYKINEGDGAFYGPKIDFNIKDVLDRNWQCGTLQVDFSLPMRFEISYEGKDGKKHTPVMLHRAILGSMERFIGILVEHYNGKFPLWLSPLQVAVVNVLNEKSQIDRVNEVAKALKDAGFRVEVDEGDDNLGTKIKKYRLQRTPYTVIIGAEEVSSGKLSIRTRSSQEIKDMDLNEFIEKLKKESKERMNDSIFTTK >gi|343386911|ref|AEM22401.1| fructose-bisphosphate aldolase, 2026361..2027323 [Brachyspira intermedia PWS/A] MVKFSDLGLVNSRELFKKAIGGGYAIPAFNFNNMEQLQAIVQACVETKSPVIIQVSSGARKYANQTLLRYMAQGAVEYAKELGVNVPIVLHLDHGDSLELCKSCIEYGFSSVMIDGSHYDYDKNVELTRSVVEYAHKYDVTVEGELGVLAGVEDDVVAEHHTYTQPEEVEDFVKKTGVDSLAISIGTSHGAYKFKPGQNPQIRLDILKEIEKKIPGFPIVLHGSSSVPQEYVKMINENGGKLDDAIGIPEEQLREASKSAVCKINIDSDSRLAMTAAIRKVFHDDPKEFDPRKYLGPARDEMKKLYMHKIINVLGSDGKI >gi|343386912|ref|AEM22402.1| conserved hypothetical protein, 2027537..2028433 [Brachyspira intermedia PWS/A] MKKYILILLFALIISCTKTVDKSPLTLQTDFGRKDNAVASMYGVALTVDKDLKVYDLTHEIPAFNIWEAALRLDQTARYWPEGTVFVNVVDPGVGTDRKSVVMKTTNNYYFVTPDNGSLTFVAESLGIEEVREIDEAVNRLTNSQESYTFHGRDVYVYTGARLASKQITFEQVGKSLGTNITKIEYQKAKFENGKFSANIPILDVQYGNVWSSLPRQLMLDNGVQVGDILNVSIYNQGNLVWNGDVKLVNTFGDIPEGDNMAYFNSELNLSVAVNMGNFSDKYKVYSGPEWSMEIIKK >gi|343386913|ref|AEM22403.1| hypothetical protein, 2028867..2029484 [Brachyspira intermedia PWS/A] MARRKKKKSSPLFILFILLIAAGYYYYNNVYNKKEISKTEKPKKETVTRYNRDDWGDWADEDNDGLNTRHEVLARESLVKPVISNNRVISGKWYDKFTGKYFTNAKDLDIDHLVPLKNAHISGASNWSKEKKNEYYNYMKNENHLVAVSKGANRSKGDKSPVEWLPPNEEYQCEYVREWYKIKTDWGLTIEEGFDEVSNRVCKGK >gi|343386914|ref|AEM22404.1| putative ankyrin repeat-containing protein, complement(2029959..2031575) [Brachyspira intermedia PWS/A] MSCSNSEEKKENNINPNVNTNSNALSQNTNTIITNQNNIVTNNVNNKSDVIVRKNIYPIKSYTEEELDEILLVRINKLLGEYVNDKENGELIKKEKEKLKPIRDLLIKTINAEDEDGNNALMLAIKYSTDSIVYYDLIKWIVEHGIDLSSKKIFKTLSYYYYLKKTYYDHIGSKEYSDIVYYLIDSGIYFDYKDVYDLMVNNGDSDIIKKMLDILYDYNFEKVDYNLQSDLLFTSIHNQDIDLVKYFLDLGADINSLNRMRDGSIGTPLMYSAFLENYDIAGYLLEKDADVNINCFQDNQELENIWNYYSYYSDERDEIINNFPVLSPTNLNGTVITGNNYYDLIVKILNKTAQNFKLANTYFYYEPTSESIVKSDTNNKYMFISSPILNQEYIDYPDDFTSEEDKYFHYITIWKKEDNKASFVSGFYPLQDAFYEYTYLSDFNITVSGNYITAEQYDSGKTYYYTFIIENNELYLDKFSTGKSNLISASATNFSEVYNEEYYYNYKSDAQKFNQTSRVKLIDVEKGFFEQLIEDYNK >gi|343386915|ref|AEM22405.1| hypothetical protein, complement(2031675..2032436) [Brachyspira intermedia PWS/A] MNNLIQNNSVIAFILLDDKMFNDFSKQLKDDWNIDITVVSHNNKNTFNIEAIDFEYELAPFNVPDNEAEILMNYNDIDNATREKILSHKSFLSIKVNSENTNFKDIALTFSKVCYSIIKVNNVSAVLIGEINLLISKDTYLFEMNEYIKNDKYFPTRLWVRVDVFSDNNGNHAYTEGLKNFGKYEIMAYKTLREVESIIRVLMILSRSIIENNLNLEDGNTMQTDDDYIGMFKFFDNKFIMLEKSLKDINKNQ >gi|343386916|ref|AEM22406.1| UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase, complement(2032455..2033807) [Brachyspira intermedia PWS/A] MGNTLLKDIIAVTKELNSKCSKNIEELNANKELEISTDSRDNFDEKKLFLAINGEKFDGNKFALETYNKGCRYFILSDASIKLPDDAVVFYTDDTILFFIKLAREYRRRFNIPVISITGSCGKTTTKELTHLFLSTKYKALKTEGNLNNEIGVPKTIFNLDNSYEIAVIEAGMNHKNELLRISEAIEANTVIINNVEPVHIAYLGSIENIAYAKSELFNHTRENANAVINKNTNCFDILKKEASRNNIKNIIEADIKEIIKKDDNTFEYKGITFKHNLIGDFNLHNVLSALKAAELYDVDLQKCADILITYESQKNRMQIINIKDCNVINDCYNSNPAALKNMIKFLSQRSESKKIAVIGDMLETETENSSYHKDIGKIINELKNIDTVIAVGKHSKDIYDTVNCEKYYFENAQSSVEKVKEFLKDDTAMLIKASLGMGFAVIIDSIKNI >gi|343386917|ref|AEM22407.1| conserved hypothetical protein, complement(2033880..2035700) [Brachyspira intermedia PWS/A] MRKLFIFISIFIFYVSSCQKNEITIPDNLKTMLIKDINDDRSLNPLYREFRGAWFSTVNNMDWPLEGKSEEEQKKLALKYLDTLYNNNFNAVFVQVKPDAGVIFPSKINPTTRYFFGKDSTNETDDYPFKTDMLQFIIDEAHKRNLEVHAWFNPYRIAVTYDTNKSYAEQFSKKNFIHVYAYSNNLKPIHWYDNKLYLDPGEPISAKYVIDSIMEVVENYDIDGVHFDDYFYQNMIDDKTYKYWPDETSSSKYASSQGYDASNTNYDDYGVNGLYAWRRNNINTLVSSIYKEIKIRKPYVKWTISPAGVWRNKEKLSDYNGYEYGSDTQSYNPNFDALHADVLLWMLNGEKTESLKNATEKDGINKMYVDAIIPQIYWSDKHETAPFDIIADWWIEQAKKSTNGKLADLYVGHPLYKMGRDTNVEPWQDIDLMSKQVDYIRTNGRNYIKGSVFFTMRNMYKDDIHTKGFGYKALNYLKENNYTFKSIIPTMNTMKDLNITPSGLTNLYITNKFNSIEITFTDSGEYKTDKYNCAVEGTSVYYSIYRKDVAEDYIVLIDKIRRENFNSDSNVVYNDKTANPKKTYIYYITALDRLHNESMPIMITNR >gi|343386918|ref|AEM22408.1| putative YD repeat protein, complement(2035786..2037801) [Brachyspira intermedia PWS/A] MLILFSANVFGVVTRTLSSGKKGFYDNGVYDGIMLTEQGSLTLAPIIEQNGVIAGKDIWKMYPANDGSMFAAISGSGAELYKRTADDTNFTLFASEKSENAFTAVIADSEGNIYAATGPYAKIIKYDSQGNELWRKTLDDTYIWDMKFDDKGNLFAAAGGNNARVLRIASDGNIKEVLKTEEQHAMSLLYDENGNKLYVGTAGRGLVLVIDLSTNLENPSYNVLYDTAENEVYAITMDNIGNLYFGTSTRQPAYLILPSIIDGDKRPDESENEFRNSLYKADTNGTVQRLFFLNQTLVLALSSDKNNNVYFVTGDTADIYKIGGNDGLLSYIGGLKNKILSTFAVSDDGLYFAISKTGEIYRVKHTYPNKGTFTSDSLDLKLLSKLGSLSTMSTIPDGSSISIEVRTGNVARVDNTWSSFVPVNADGKIDAPYGRFIQFKVTMTTSDTETTPILNSIDLSYVENNLSPEVLNGGLTTHYLQQNDSTETAKNPQLEENESMIYWKGSDPNGDKLIYNLEYRLKGEKNYRKLADNLSTSYFKFESYLLPSGIYDFRITASDRYDNPISIAKTKTLEVFNVKYDNDPPEILDFNVTGSGANRKITFRVEDKLSFIKTVRYSTITGEWKYIVPDDGMLDSMNEVFTVNIDDANAGSVTVEVMDTDGNTKYYSFLI >gi|343386919|ref|AEM22409.1| hypothetical protein, complement(2037894..2039654) [Brachyspira intermedia PWS/A] MGTMRKKLIFIFTLSIILTFNLFSQTNEELPPYPPENPEVIPISEIYEGMEGVGYTVIHGTNVEPFKVKVLSILKKRWHNSDAILIRCEGLNLDHSGTVAGMSGSPIYFDGKIAGALAFGWNYAKDPIAGVTPIEEMYKLYEDTNAKAPMLGFADDNSLQTPLMFSGISSKAFNEYSSVFKKAGFYPMQAGGSISDTNQASKFLFGDSVAIVLADGDISLAGIGTVSHTDDEKFLLFGHSMWSKGRIIAPVSRAYINHIVASVSSSFKLGYAYSNYLGYTVYDGAFGVSGVYGEVPENVMVPVKVEIEDQTFLTRDFNFRVLNDPAYFSDILSMSIYSAVSSAAGENEEGVFSISYEIETDYFDEPYKVSNRILSYSSTDAFKDAIDQVIAPVNFFIRNNFNRVGIKSVKLSIKRSGLEYVFLNDITLVEPRAVAGETIHLRLGYTPYGKEKQYVDVPVRLPVNLKTDVYTIYAANEYIFNYAEQLFMPSKYEIRSLDDVQRIYGKSYDDSALKVWLYSSSRGVQIGKDLYPTLPSSRYGAMAKNATSDKAAVITPINGNYQMDSSILGLMKLDIIIEGARKYENR >gi|343386920|ref|AEM22410.1| hypothetical protein, 2039833..2040501 [Brachyspira intermedia PWS/A] MVEAKILNLAITDKGFVVILKPEKSDKVVPISIAYLEAQSIMSSLIGYKIERPLTHDIIYSIFQNCNIRLINVIIDNVHIDTFFAKLVIEHNAKNIFIDSRPSDAIALSLKSKAPIFIEEHVIEKAGILLEENDNLMKVKEGIPFTYQKFERDELIKEKNGENIFVKKEPEEINNIDNNQLNNNNNNKKNKEELQKLLDQAVKEERYEDAAKYRDELDNLTE >gi|343386921|ref|AEM22411.1| hypothetical protein, 2040581..2041753 [Brachyspira intermedia PWS/A] MKHYIKIILFLILFSYSVIYSKPSDKIKFEKDQLTELECDFFIKVDNGETNDLELHYDGFIIASGITDKDEFEFYRQKLNDIRNFAKKELSQYTKEGAYAFGKRLLNWLYTSGTLKQYFETSTLFQDLIYKGEYNCLSSSILYSLLYKEFGFEVTGVLTSSHSFCTIYADGKSVDVETTLSRGFDPGQKEIRNTGNSTIVTFVPQGNYRDRNNVDILTLIATLYPNSISLKKIEKDLEKQLVMAKKAYYLSPNTKMYNDNLVNAYNRLALDYLNKKNFEAAYKTLEEAYMFDSDNAMTKNNKIHYYNTIGTSYLSVKDFPNAIETYKIGISDIGEGADILKKNLKVSYYNYAVTEYNQRRYNNASIISEEALKLFPNDRDFIRLLSSIPK >gi|343386922|ref|AEM22412.1| hypothetical protein, 2041780..2042283 [Brachyspira intermedia PWS/A] MKFYFTIIIFILITCPYSFAQNNYNLNIKFRVIEKFDKILSSDNKEYVFYIDANYIFTDEGKTIYSNNIYNIQNTLNDLERQEKDAKTQAEKNAINQNIRMYKALLAYNTPPKKFITLLINRQIHQYISKYPSSYIDDMMQNNLQDFYDDIRNNIVYNERYTGKLLP >gi|343386923|ref|AEM22413.1| carbohydrate kinase, PfkB family, complement(2042331..2043233) [Brachyspira intermedia PWS/A] MLNILTFGELLYDVYDNVSVIGGAPFNYSLQLSRLLSKDDKLKFITALGNDDYSKDALSFIDNENIDKSLIQILKDYETGKATVFLNEKKVPDYIIHENSAWDNIEYNGNIENALKENYDLFYFNILSQRNEKSYNTLKNIFKNINAKYKVCDVTFRKNYYTKEKIKESLEFINILKINDDELAIIKELFYTSMPNDNEVLLKAINKDFNIDYIFLTLGASGASVLYNNEYIFNPSNKVNVVDTVGAGDSFCAALSYAILRGLDINNVLKFASSVSEEMVQVKGGTARYDIEKVKSKYSL >gi|343386924|ref|AEM22414.1| penicillin-binding protein 3, complement(2043253..2045157) [Brachyspira intermedia PWS/A] MNDSRVKRLYLFLICFFIGTIAIFIQLFNLTIKERKSVSSLVGLDRPRGTIYDSKMRPLTINIPAYTIYLDTESVSLDGNDETDINEAYSQIFNIINITKEKFADLLNTKRRTIMLAQNINLDSYKKIKEIKNKYNVKSIYGIESYKRFYPYKDIFAHVIGYMNRTETEGYAGLEATYEAILSSENDNPKDIVLTLDRDVQTIVRNEVLKTVAEKSPQSVTVIVSDVNTGSIVANYSYPSFDPNNPFIYVNNERMDRSIMSTIYPGSTMKIFAELAAIEQGVVNSDEVFHCKGYYDYSRQTRIHCDYPHGDVAFNDILKYSCNFAVVTIAERIDNQFFYDYLKRFGFGEPTGVGPYKNEWSGIYHSLNKWHRFSKGYLAIGYDLSVTPMQIAASYLPLLNGGWKVPMHVVDSFYDGIEKISATNNLKRTRIIDEQYSQIARVLLRKGVESGSTGHRANLLNIDVVGKTGTAITEVYRNNESEKPEKYYQSIFVGGFPLEDPKISILVLLDDPQGQGSQGAGRVAAPLFAKIANQIIPYLGLIDGEIYTINTNDFLSLVPHSSNITNNVMPNLNGLSLRDALNSISYIVSNNNAKIMIQGEGYITDFSPQAGTSVTNDSIIRLSLKAPIKEQENK >gi|343386925|ref|AEM22415.1| extracellular solute-binding protein, family 5, complement(2045441..2047018) [Brachyspira intermedia PWS/A] MLLLAASCSKKGNTNDQGIIVNLSVEPKTIDPSLNAQIYGVIYISHVFEGLTVRDRNNKIVPGVAESWEISEDGKTYTFFLRTNSTWSDGKPVVAEDFVYSWQRQVDPKVASEYSYQHEPVKNAMAITRGELPVDALGIKAVDDHTLVVELEAPTAYFLEVIAFPTFSPLRKDIIEQYGDKWTLSPETYIGNGPYVMSERNIDENIIMVKNPNYWNADTIVAEKITFVFMQNGAAAVAGIKDGSLHMAYEPPQKDIPTLTEEGLIQIKPLIATYYYPINVTNQYLKDPRVRKALSLAIDRNYIVEQVTKGGQKPAGGWVPYAVNDVNGDFRINGGDFYDVSKEGYAKNVEMAKKLLADAGYPNGEGFPVIEFKTDPGNHVEIFEAVQQMWKEHLNIDSTITQIDNALLGQTLLEKNFMIGRLYWSADYSDPMSMMSLFTSYNTQNNGGYSNKRYDELIGQAMSTDDNNIRMQAMHEAERILIEEDMGAIPLYFFTEPLLVNPKLKDVVYNPLGFHKFFYAHLDEN >gi|343386926|ref|AEM22416.1| lactate dehydrogenase-like dehydrogenase, complement(2047162..2047980) [Brachyspira intermedia PWS/A] MLDKLKEYGVKYMSTRSVGYDNIDIDYANKIGIKIANVPSYSPNSVSEFTILSLLSLIKNYNNLLINGYNRNYTRTGLVAKEIRNLNIGVIGTGRIGSLTVKHLKGFSPKNIFVYSRTEKEEIKQYAKYVSLDELYKNSDAIIYHIPYSKETENMICKDSINKMKKGVYIINVSRGGIVNNKDLLEGLKSEHIGGAALDVYSNEIEYVNKDIKDIVLKDEIIEELFKMDNVIITPHFAFYTDEALLNMVSISIDNIFEFKITGKCINQIKNI >gi|343386927|ref|AEM22417.1| hypothetical protein, complement(2048387..2049415) [Brachyspira intermedia PWS/A] MSQQKISPNDEVLAIKILAEYTDLNKYIYLVFFIDKYNSSLIDIAFVISDDKKLLTFLNAYTDLLELYKHIKIYNKLNNEKNQYFDKFNELISNIFNEDRNINNIIIYQSNNNSISIIDIFASTMNRFMDFHIGTFDINSSIIDINAVRTTIENVNKEMEATDSMHAAYQNTGDGTKAENGQAEEVQPPTYKLINASFVVDPIGGKSINDIVPGDKVIVTINSNTVEENIIYLELKGKKDKYSKYLVPAEVLEKTVEEKSIKILLKLIDGYCCLIEEIEPIKLKLFNPEKDLYVEPSKEEENKSLFERIFSKIGTFKLIMFGLGAIIIFVFIAIVYVFFFQT >gi|343386928|ref|AEM22418.1| TPR domain-containing protein, 2049603..2050295 [Brachyspira intermedia PWS/A] MSENTNKLQKNAELIFTYIYNNRIIFISGFVLIVVIIAGILLYRANIESQDAASNVEFESALALYNVYQNAQLPPEQLNDPAIIIDITSRFQKVYGAAKGNNLKLRSAYALGCVYYDINNYKEAEKYYQEVANSRGFYLQETAMYNLANTQIGLSNYTQAASTLENFIKAYPKSYLLPQATLTLSDVYLAQNDRTKALNTLKSWTTKNTNNVEYLSLFRETISLIENNVY >gi|343386929|ref|AEM22419.1| DNA or RNA helicase of superfamily II, 2050337..2052031 [Brachyspira intermedia PWS/A] MNKNAPLIVQGDGTILLDVSTKHFEEIRNFMLVFAELVKSPEYIHTYRITLVSLWNAASLNYTSEQILSFLKKYTSYEIPKNIVKQIETSIEKYGRIKIIKEDDKYYLISEDKNIIDEILHYKLMIKYIKSQINPNKLEIDATYRGHIKLALINIGYPVQDLAGYKTGEEYHFHMRDKLASSGDDFALRDYQRNSVDAFYADGKPEGGAGVIALPCGTGKTVVGIAAMHKTQTKTLIIVTGVTACRQWRDEILDKTDIPPEDIGEYNGLNKEIKPITIATYKILTYRKNKESPFVHFELFFQHNWGLIIYDEVHLLPAPIIKLTSEIQSMRRLGLTATLVREDGLEKDVFCLIGPKKFDIPWRELEEKKFIAEAYCYDIRIPLDDSHRSDYVVSSDKVKFRIASENVFKYTIVKKIIEKLEGKNILIIGQYLDQLNEMKKRTGYTIITGKTPQSERDIIYKKFKTGEIKILIVSKVANLAVDLPDANVLIQISGTFGSRQEEAQRLGRVLRPKKGENKSYFFSIITTDTKEEDFAHKRQLFLTEQGYHYELLDKDSFEELEFNN >gi|343386930|ref|AEM22420.1| PTS system, IIabc component, complement(2052087..2052344) [Brachyspira intermedia PWS/A] MELNYKKIAEDILSKVGKDNIESLSFCATRLRFIVKNREQIKDAEVEKIEGVTGVFYNSGQYQVVLGKNVKDVYDEIAKLGVTTL >gi|343386931|ref|AEM22421.1| hypothetical protein, complement(2052528..2053691) [Brachyspira intermedia PWS/A] MKKYKPATKEELKELVFKDGIKLDCVDTSLITDMSYLFHESKRKDFEGIEDWDVSNVEDMSYMFASMDFNFILDLSRIDFNPNLNNWNVSKVKKMSNMFAYCSSFNQPLDKWDVSNVEDMSFMFNLAKNFNQPLNNWNVSKVKDMRGMFKLAESFNQPLDKWDTSNVEDMSFMFNLAKNFNQPLNNWNISKVEDLSNMLSYCTFFNQPLNDWDVSNVKNMEDLFNSCENFNQPLDKWDTSNVENMCRMFDNCKNFNQPLNSWNVSNVNYMSCMFLSAESFNQPLDKWDTKKVTNIEFMFGYAEKFDHYESLEHWNLDKLKDITLICDDENKLHTRLKIYMQAFYPKEDYITITKDNVKEIYDLIAKDKNRRIVKLRKKLEEDFSLDI >gi|343386932|ref|AEM22422.1| hypothetical protein, complement(2054071..2056659) [Brachyspira intermedia PWS/A] MKKYKPETKTELKKLVFTDGIKLYDVDTSLITDMSKLFYESKRKDFEGIEDWDVSNVTNMDMMFAYMGYNAMVRYSNIDFDHDLSNWNVSKVKSMNNMFAYCSNFDQPLDNWDVSNVEDMRFMFCGAKEFNQPLNSWNTSKVKNMRGMFEECEFFNQPLDKWDTSNVEDMSNMFIRAKRFNQPLNTWNTSKVKDLSSMFAYCDAFNQNINDWDVSNVTNMDSLFRQCDKLNQPFDKWDTSNVVNMEKTFFSCTEFNQPLNSWNVSNVENMDMMFYMAQSFNQPLDKWNTEKVITAVGLFRFAYKYDCYESLEHWNLDNLEEVGTFCDDEEKLHTRLKVYMQAFYPKEDYITITKFNVKEIYELIAKDKNKRIVRLRKRIESDFSSELSFVTKDYNFTTIEKAEKYAQKKYNAKREDKKLTFIKDCHVLVKDKSREVDITVIKYIYSEYLSLKRTINRLEKIDNIINLLDFESFLKFVRDVYLENQNKEIAGFLYAMYGGDEALKEISELISLGIDSKVFLIMIKFNIESRYAQSLLYEIYSDTKTAEIRREAGRMINELIEKMNIGYTEFRLRCTPNYGFNSQGEKILNDDYKLIVNTDYSLTLFDIKNNKELKKIPQNLDKELKEEIKELRKEVQKFINHNARILSITLIDGDIYSYDLFKEVFIDNYLMNRFASALIWNLHDKDKNFITTFRYSADGSYSNCEDEEVKINADNFISLATPAEMDDDTINKWKKQLEDYELVQPINQLTVIKLDKNNLKKEIKKIKNIEASYGAFKFFAKKYDMYTNDVVGYNETITYTFPANDGDIFTISAKVDADTEYDEPVDITIDFQKGENKEEISKRFVYSFLVFMIFDFRLTDLF >gi|343386933|ref|AEM22423.1| hypothetical protein, complement(2057171..2059765) [Brachyspira intermedia PWS/A] MKKYKPTTKEELKRLVFTNNGIKLGDIDTSLITDMSDLFNKSERRDFDGIEEWDTSNVENMAYMFAYMNYNVLGQYSMTEFNSNLNNWNVSKVKNMIYMFAGCTYFNKPLNKWDVSNVENMSGMFFGAKKFNQPLNNWNVSKVKDMSDMFHNCEAFNRPLDKWDVSNVKDMSNMFNVALKFNQNINNWNVSNVEDLSKTFRYCKAFDQPLNDWDVSNVKNMQHIFEDCENFNQPLDKWDTSNVESMEFAFRACGKFNQPLNSWNMSKVTNIEHMFAFTEEFNQPLDKWDTRNVISVMLLFAYARKFDHYESLANWNLDSLQAISIICDDKYMDKLPTRIQVYRQAFYPKDDIISITKFNVKEIYELIADDKNKKVVRLKKRLESDFSSELSFVTNNYNFKTIEKAEKYAERNYNAKKYDKKLEFIKNCPVLVKDKSREVNINLIKYIYSEYLSLKKTIKKLEKIDNMVNLLDLKSFVNFTKEIYLKNQDEVITAFVYAMYGGDEALKKISELMNTIESKNLLTMISFNIESRYAQSLLYKIYLNSTKSAIRKEAVEMINELLEKINIGYTEFRLRCMPNLGFNSKGEKKLNDDYKLIVNNDYTLTLFDIKNNKELKKVPQNLDKKLKDKIKELGKEADKFINHSSHILSIMLIDGDILSYDLFKEVFIDNYLMNKFGSGLIWNLYDKDKNFITNFRYTSDGKYLNTENEKIKINADNFMSLATPIEMDDETIDKWRKQLEDSKLSQDINQLTSIKLNKDNLKKEIKKIKNIDTSYGAFKFFAQKYDMHTNDVLGDNDTITYTFTANDGDIFTMSAKVDEEVEYDDLVNISIDFKKGENKKEISKRFIYTFLVFMIFDFRLPDLF >gi|343386934|ref|AEM22424.1| hypothetical protein, complement(2060380..2062767) [Brachyspira intermedia PWS/A] MNKYKPATKEELKNLVFTDGVKLNDVDTSLITDMSYLFHKSERKDFEGIEDWDTSNVDDMSFMFFWAIEFNQSLNNWNVYNVKNMSGMFQAAMKFNQPLYKWDTSNVKTMSFMFNYAKSFNQNINNWNISKVEDLSYMFCECEVFNQPLNNWDVSNVNTMEGTFRRAYKFNQPLYKWDTSKVENMHEMFVQCKDFNQTLNSWNVSNVKNMEAMFCDTLSFNKPLDKWDTKKLKKIDSMFKYSKSYDCYESLANWDLNKILNMNELCYDKEKLPLRIRAYLQAFYGSNKNYLTITKDNVKEIYYSILKDTNKKIVALRKQLESDFSLVLSSVTNDFKTIEEAEKYIENNYNKKDDKKVSFINNDYKVLIKDKSREVNINVIKYIYLEYLSLKRDVKRLVKIDNIVNLLDRESFIKFIKNIYDETNKETAAFVYGIYGGDEALKNIYKKAHDTKLSLIIIKLNNQSKYALKLLYEIFMTTKKTEVRLEAEKIINELLKEMNIDYSEFRLRYALDFGFNSQCEKELSDDYKLILNSDYSLSLFDIKNNKELKKIPKNLDKKLKVEIIKLRKEIKKFIKNNSNILAITLINGNKYSYDIFKDIFIDNVMMNRFASSLIWNLYDKYYNFITTFRYSGDGSYSNCEDEEVKINDNNFISLASPVEMDDDTINKWRKQLEDYEIAQPLQQLTVIKLDKNNLEKEINKIKNINATYSSFKYFTKKYKMNISNVIGYDGIITYSFSSNDEDIFTMTSKIQGEYDEQVNITIDFKKSENKKEISKRFVYTLLVLIIWDFRLTDLF >gi|343386935|ref|AEM22425.1| hypothetical protein, complement(2062851..2065265) [Brachyspira intermedia PWS/A] MEKHKPSTKEELKNLVFTDGIKLSDVDTSLITDMSELFQKSQRKDFEGIEDWDTSNVENMSWMFRECFSFNEPLDKWDTSNVINMKGMFSLAKAFNQNINNWNVSKVADMSYMFNACDYFNQPLNDWDVSNVKTMEAMFHSALSFNQPLDKWNTSKVENMHEMFCRCKQFNQPLNSWNVSNVKTMEAMFYSADSFNQPLDKWNTKKLSKMYSMFKYTDSYDCYDSLANWDLNKVSDISDFCANYERFYEKLPLRLRVYMQAFYGSHKVYVPIENNEEYDDDEYDFISEEYDLVSRDYITITKENVREVYNAISKDTNKKVMALKKKLETEYSGELSSITDDYNFKTIEEAEKYVENNYNKKDDKKVSFINDNYKVLIKDKSREVENKVLKYIYLEYLVLKRDIKILTQVDNIVNLLDKESFIEFIKNIYNETNKETAAFIYGIYGGDKAIKNIYKKEKDSKLSLLIIKLNIESKYALRILHEIYSNTKKSEVRYEAYNLIDEVIKKMNISYNEFELRFSPDFSFNSKGEKVLNEDYKLILNSDYSLSLFDIKNNKELKKALQNLPEDLKDEITKLRKEIPSFMKNTSSLLAVLLASGEKYSYNLFKEIFIDNAIMNRFASSLIWNLYDKDDNFVTTFRYSGDGSYSNCEDEEVKIDDNSFVSLASPIEMDDDTINKWRKQLEDYEIAQPLQQLTIIKLDKDNLKSELEKIDNSEIAYGTFKAFGARYGMYTEYIGYDVVSSYSLKSKNGDTFSIYANVNSNTDFHDRVKIDIYFTNENGEEVSKRFIYTLLVLMILDFRFTDLF >gi|343386936|ref|AEM22426.1| hypothetical protein, complement(2065593..2068166) [Brachyspira intermedia PWS/A] MKKYKPETKQELEQLVYTDGIKLYDVDTSLITDMSELFHNSTRKDFEGIEDWDVSNVEDMSYMFAHMSYDSFENRSKAKFNHNLNNWNVSKVKHMSFMFYYCQDFNQPLDKWDVSNVQDTFRMFDNCKKFNQPLNSWNVSNVTNMSGMFQVAESFNQPLDKWDVSKVTTMRAMFNYAKAFNQDISNWDVSKVEDMGYMFSICVNFNQPLNDWDVSKIKTMEGMFRNAFKFNQPLDKWNTSKVENMNQMFNEALKFNQPLNSWNVSNVKTMESMFRGTESFNQPLDKWDTKKLKTMFGMFDFAEGYNSFDSLANWDLNKVSEMSNLCFKRYEELPLRIKAYLQAFYGSYKDYLTITKENVKEVYDLISKDTNKKVLSFKKRLESEFSEELSSVTDNYNFKTIEEAEKYVEDNYNKKDDKKVSFINDYKVLIKDKSREVANKVLKYIYLEYLLLKRDVKKLVQIDNIVNLLDKESFINFAKNIYDENNKETAAFIYGIYGGDEAVKNIYKKEHDTKLSLLIIKLNMQSKYALRVLYEIYSNTKKSEVSYEADKLIDEVMEKMDISYNEFQLRFSSDFGFNSQGEKELNKDYKLILNSDYSLSLFDIKNNKELKKIPQNFDEDLKEEITKLRKEIPSFMKNTSSLLAVLLASGEKYSYDLFKEIFIDNAMMNRFASSLIWNLYDKDSNFITTFRYSGDGSYSNCEDEEVKIDDNSFVSLASPIEMDDETINKWRKQLEDYEIAQPLQQLTIIKLDKDNLKSEIEKIDNLEIAYGTFKAFGERYEMYSEYIGYDVVKSYSLESKNGDTFTIDADVNSKTDFHDRVKIDIYFTNENDEEVSKRFIYTLLVLMIWDFRLTDLF >gi|343386937|ref|AEM22427.1| type-I restriction-modification system HsdM, 2068396..2069985 [Brachyspira intermedia PWS/A] MADNKSIIQRDELHSKIWKIADDLRGSVDGWDFKQYVLGMLFYRYISEHLANYINQNEWDSGNKEFNYTDLDDKDVEDVKADIITEQGFFIYPSELFENIRKEANNKINKEDSKDKHNLNERLQKIFKDIENSAKGTKSETKIAGLFDDIDVNSNKLGPTVLKRNERLIKLINGIADIELGDFKDHSIDAFGDAYEYLMGMYASSAGKSGGEFFTPQEVSELLTRITVTGKSEIRRVYDPACGSGSLLLKFKKILNDEERKIFYFGQEINITTYNLCRINMFLHDIGYEKFDIAHGDTLTEPKHVDDEPFDAIVSNPPYSIKWAGEDNTLLINDPRYAPAGILAPKSKADFAFILHSLSWLDTAALAAIVCFPGIMYRGGAEQKIRKYLIDNNFIECIIQLPDNLFYGTSIATCIMVLSKSKIDGKTLFIDASEDYEKATNNNKLSDKNIQDILSYFTKRETKKHKCYLAKKEEIEAQDYNLSVSTYVEQKDTREKVDIKVLNKEIEEIVLKEEKLRKEIDKIIKEIEE >gi|343386938|ref|AEM22428.1| hypothetical protein, 2069996..2070784 [Brachyspira intermedia PWS/A] MRLSDVLSKKVSSEFVPVDNFFGYRKYKMGKSKKIDIGTVALNFFCEKCDEYRTFYSRYEADCIYIDEKKANINCMLFDKCNTFVVVIFLIEIENSITDNLPKVRILKKYINKFDNVKLIDNIYGEYTDKLEMANIAFNANLGAGSIIYLRKLFELITEEIAVKSGISIDFTTKNGKNKKKIFKDLLKEVDEKCNIIPVEFSKNRYDLFRKLSDIIHGEYDENTAIEKFDAFYRLITGILDNIKNREELIETAKKVGLKKDE >gi|343386939|ref|AEM22429.1| putative type I restriction-modification system, specificity determinant, 2070848..2071399 [Brachyspira intermedia PWS/A] MERVKEKGKDDLNVKQVYVVSNVKGIVRSEDYHDNNIHSDDTSNYTILRQDMFAYNPSRLNVGSIGRLKKTISGLVSPMYVVFSVDKSIVDVTYFEYFIKSPKIINKIDSLKEEGARFRFDYNRWNWIKIPVPPIEIQKEIVRILDILTEYQDYLNEEVILRKKQYEYYRDKLFTFKEKKIKD >gi|343386940|ref|AEM22430.1| type-I restriction endonuclease R subunit HsdR, 2071563..2074685 [Brachyspira intermedia PWS/A] MENKENIDIIKMSEESTVVAKYIPVERTRTKYQTEEELEQEFIKQLTEQGYEYINIKNENDLIKNLRKQLEKLNNYTFFDTEWEIFFNTTIANGNEDIINKTERIQENYIQAITLENGYTKNIKLIDKDDIYNNNLQVINQYKEESSEKKARYDVTILINGLPMVHIELKRRGVNIREAFNQINRYGEENFWAGSGLYQYVQLFVISNGTNTKYYSNTTRYRHIKNSERQVKTSNTFEFTSFWADARNKIIPDLVDFTKTFFSKFTLLNILTKYCVFTSDKALLVMRPYQIAAAEKIINKIILSENHKIRSKKESGGYIWHTTGSGKTLTSFKTATLARSLNFVDKVLFVVDRKDLDYQTMKEYDKFQKGAANSNTSTKILKEQLEDDNAKIIITTIQKLSRFIQKNENHEVYKKHIVMIFDECHRSQFGEMNEKIKKAFKNYNIFGFTGTPIFKKEKDDEKYPNLKTTENAFGEKLHTYTIVDAIRDKNVLPFRIDYINTVKEAKDFEDKKVKGINTDDVLLNDERIRLIVKYIIEHFDQKTYRNSNNAAYSHDIIVNVEDMAKSKHNTVKEKKEKREVKGFNSIFAVSSIKAAKKYYKEFQKQISETSSNLKVATIFSFVQNDNNDNYDDTIQEENFEPKNLDEDSREFLESAIKDYNQIFETSYDTSDEKFENYYRDVSLQMKNNRIDILIVVNMFLTGFDAPTLNTLWVDKRLQMHGLIQAFSRTNRILNSVKTFGNIVSFMNLEENTNKALSVFGDKDANSIALLKIYKDYFNGYDENGEHVLGYTEIVDLLKTKFPINEAIVTEDDKKLFIKLFGDLLKIRNTLSAFDSFREDREKILSDIDFQDYSGKYSDLYTEITQSKEKNKNNPEIENIQDDVVFEIELIKQVEVNIDYILLIVARYKNENKDKDTIIEHVRKLINAGIELRSKRELIENFINQMNASDTDIQEEFYQYVKEEKEKDLIKIIKDENLKEKETNDFITSCFEYGEIRTSGTDIDKILPPISRFSKQGNKIEKKQIVVEKLQSFFEKYSGLI >gi|343386941|ref|AEM22431.1| hypothetical protein, complement(2074690..2076045) [Brachyspira intermedia PWS/A] MNILVINGSPKGNNSITLQTLLFLEKLFIEHKFEFLNVGQKIKYYEKNFNEIKEAFEKANIIIFSYPVYTFLIPYQLHRFIELLKENNTEVKDKFATQFSTSKHFYDVTAHKFLEENCLDLGFKYIKGLSADMEDLMKKEGQDDAINFFNYLIFSIENNLYTQSINSKPQDKIIYKRRFNNNIENKDRSKDVLILSNTSKDDENLKNIIEDFKNIIPYKTREINIREYNFHGGCLGCFGCAITGKCVYKDGFDDFLRNEIQKADAIIYAFTIENHYTHSSFKLYEDRQFCNGHRTVTEGMPIGYIISGDYDSEYNLQTLIESRAEVGGNFLTHIANDYNKDIYNELEKLSSIMKYAIDNKCTRPKNFYGVGGMKIFRDLIYVMQGLMKEDHKYYKKHNIYDFPQKQRMKMLQIKLVGALISIPSMQKKMKNKMNEYILMPYKKIIDNAKHK >gi|343386942|ref|AEM22432.1| transcriptional regulator, LacI family, 2076342..2077325 [Brachyspira intermedia PWS/A] MKIRELSRISGISPATISRMLKDPNSVKESTRNKINDILKNNDIDKYFNTKCIKRIMLIIPDLSNTFYLDLFNGIVSIVQKNNIPFEIYLTNESIKEEEKIFSRIKTSRDIGVIWVPASNERDKLPYDKNTNLVSLVDRNLPFDNIYIKNLSDNFNAAKKSTDLLIEGGAKNPIIITGGLSLSNAQERKEGFLESIKNHNLDNGVNRVYYGDFNDSESGYNIIKKLVKEKFEFDSILAANQILAVGILKALNELKLSIPDDVSIITFDKLVNLYSFYENNNISEVVFPAFDIGSNATSMLLEQKTFNIQKQIFNYSAEFHLKGSEKK >gi|343386943|ref|AEM22433.1| putative carbohydrate kinase, 2077335..2078918 [Brachyspira intermedia PWS/A] MKYIIGIDVGSGSSRAGVFSLDGNSLGFESIPIKLRKIDENFVEQSSNDIWNSVCQSVKKVISKSKINADDVIAIGFDATCSLVALDKDDNPVSVNKDCLDDWNIIMWMDHRAIKEADEINSKKFDVLKYVGGKISVEMEIPKILWLKRNLPENYKRVKQFFDLADFLQYKACGSNIRSSCTVACKWTYLAHENKWDEKFFKSLDLYDLIEENKIGNIIKEPGIFAGNLTEESSKELGLSTNVKVAVGMIDAHAGGLGSLIGKAENTLVIVAGTSACHMMNSKEAIFVNGVWGPYYNAMVSGMWLNEGGQSAYGSLIDYNIKKHPYFYNLIKEGKTFKDIYKILNDEVYKLKNINKFYIKDIHILDYHYGNRSPIADPKERGIEIGLDMSEDIISMAKLYWATIDSICFGTRNIIETSKNNGYTIDTIIVCGGAAKNPLFMRELADICQCKIYTAGHEESVVFGSAILASIASGEYKNYEEALSKISKKGECIEADKTMKEYFDKKYQIYLELYKDKLKYEKLMSDF >gi|343386944|ref|AEM22434.1| lactaldehyde reductase, complement(2079018..2080166) [Brachyspira intermedia PWS/A] MARYILNETSYFGIGIRSELATEIKARGFKKALLVSDKVLDSCGVLKKVKDVLDGAGISYDTFLDIKQNPTIKNCKDGLAKYNESGADFLIAVGGGSVMDVAKAIGITKNNPDFADVKSLEGVAATKNKSVPIMALPTTCGTAAEVTINYVIINEEENRKMVCVDPKDIPIVAFVDAELMASMPNSLVAATGMDALTHAIEGYITKGAHTISDMFEYKAMQLISKHLRGAVKDKNMTDMDGMSIAQYVAGMGFSNVGLGIVHSMAHPLGAIFDIPHGVANAVLLPTVMEFNMPVCIDKYVDIAVAMGEKVDGLSKEEAAKLAVEAVRKLSKDVNIPANLRELKIKEEDLPRLAKDALADVCTGGNPRDVTLDDILALYKKAY >gi|343386945|ref|AEM22435.1| L-fuculose phosphate aldolase, complement(2080228..2080932) [Brachyspira intermedia PWS/A] MSKNSRKDLAKSIIDACLSMRKDGVNQGTAGNISLRYENGMLITPSGMPYEIMTPDDIVFVDENGTPEKDKIPSSEWRFHLSILKDNPNFNAVIHNHAIYSSMVSILNIDYIPAIHYMVGVAGGNKIPCVKYATYGTQELCDNISESMKGYKACILKNHGLLAADETLPKAYHVMMEVENLARLYMGVRGIGDYSVLSDAEMEIVLEKFKNYGLNVKHKTKDKPKTKSKAKTKK >gi|343386946|ref|AEM22436.1| Carbohydrate kinase, FGGY-like protein, complement(2080972..2082381) [Brachyspira intermedia PWS/A] MSNKVYSIACDFGSSGGKIFLSKFENDKMSLEEVHRFSLTPIKINNYYYTDFIYMYNELLKGIKKVVDMGVQPSSLGINSWGVDYGYIDKNGELLSNPVNYRDTRTIDTIKKLEKIGLGARELFNITGISCMPFNSIMQIYEDIQGRADIVNNASKLLFTPDLFGYFLTGNISSEYTISSTSQLIDVKKKVWSEEILQKIHFDINKLPPLIEAGTKKGLLKQEIADYLGCKPFDIISVASHDTASAVLSAPIFDDNTAYLSSGSWSLLGVELKEAVLIDEAFENNFTNEMGYNNTIRFLENINGLWTIQLLQKKYQISFNDMEKLARDNIKDEHRIDINDNRFYNPKDIEDEILSYYKDTNQPNVSKDSRGVIIASVYNSLAESYAKYINSLKKLLNKDIKKLCIVGGGTRDKLICELTKEKTNLTVSIGPIECTATGNILSQFKALGVLKDVEEMRKLVINSFEISEI >gi|343386947|ref|AEM22437.1| ABC transporter related protein, 2082614..2084110 [Brachyspira intermedia PWS/A] MSDNVILKMTGIEKRFKGVYALKNFNFSLEKGEILALIGENGAGKSTLMKILSGIYKKDAGTIEYFGKPLEVSGPKEAEENGISIVHQELNLMNHLTVAQNIFIGHEPLNKFGLIDDKLMIKRARKIFEGMNVDINPAAKIGSLTVGKQQLVEIAKALTHNSKILILDEPTAALTESETKELFRIIKDLQITGVSIVYISHRLDELFILSDRITVIRDGEYIDTKITKETNKDEIVNLMVGRVIYETPKTESKVAKDAKEILRVENLVVPGVVKDVSFSLKHGEILGFAGLMGAGRTETARAIFGADKFESGKIFVEGKEVSIKSPVDAIKSGIGYLSEDRKRYGLALGLPVFENMMMGNYDKFSNMLMVQNSKVKNIAEEEVQSLNIKTPSIDQLVKNLSGGNQQKVVIANWLIKECKVLIFDEPTRGIDVGARSEIYNLMEKLVSMGKSIIMISSDLVEILRMSDRILVMSEGKKTGELDIKGTTQDDIMKYATMR >gi|343386948|ref|AEM22438.1| inner-membrane translocator, 2084463..2085251 [Brachyspira intermedia PWS/A] MVGGVLITNFKVPMWAILIIVIAVATLGGFINGFLISYFNLPPFIATLGMLMVTKGLSGIVSKSQTIYYPTITDPDYGWFRVLFNATESNFPSGFIMLAIFTIISVLVLTKTIVGRYIFALGSNEEAARLSGIKTNKWKIIAYTISGFFCGIGGLTFAASYSSISPGAGQGYEFDAIAAVVIGGTSLSGGVGSIIGTIIGVYIMSVLKVGLPSVGVEQFFQYFTIGIVVIIAVLIDVYRIKMSNKVKKVDVKKKDENNLKKK >gi|343386949|ref|AEM22439.1| periplasmic binding protein/LacI transcriptional regulator, 2085399..2086421 [Brachyspira intermedia PWS/A] MKRILLLATTLIGLTVMLASCGNKEPYIAVVSKGFQHKFWVTVRDGAEAAAKQNGVKISFVGPETESDSKIQQDLLDSEINKSPDAIAFAAVTGDFTEQIKRIKEKNIPLIGFDSGILPDQAQGAVLATASTDNRAAAAIVADKMFEALKTRIATFTAANKAKIAVLQLDNSDTGIGRAEGFVKRFTELADGDATTAGKYTLQVIVPTTQNEADIANEVNALRGKSCLGIYLSNEAMARGFLVVYKSAEAGAANTIVGDAQDGGDLIAMGFDSGKPQLDAIRSGIIKGSVTQDPYSIGFQAVTLAYKASKGESVANVDTGAKWYDSTNIDDPEIAKLLYE >gi|343386950|ref|AEM22440.1| L-fucose isomerase, 2086451..2088232 [Brachyspira intermedia PWS/A] MFRMQNNLPKVGIRPVIDGRRNGVRESLEDTTMNMAKIAAKLIEENIKHPSGEKVECVISDTTIGGVAEAARCQKKFDENNVKLTLTVTPCWCYGSETIDMTPAIPKAIWGFNGTERPGAVYLAAADAGHTQLGLPVFSIYGKDVQDAGDENVPDDVKEKILRFVRAGLAVATMKDQSYISMGYVAMGIMGSMVDAEFLLDYLGMRTEFVDMSEIKRRLELEIYDKEEFKKAWEWAKQCKFGADNNKVKASDEEKEKEWATSIKMAMIMRDLMVGNPKLAEMGYIEEAQGHNAIVGGFQGQRHWTDYMPNGDFAEAILNSSFDWNGIREPYVVATENDSLNGLSMLFAHLLTCKSQLFADVRTYWSPEAVKRVTGKELTGKAKDGIIHLINSGAASLDWTGEEKVNGNPALKEFWNITEEEAKKCLDATQFSPANREYFRGGGFSSTFLTKGEMPMTIIRLNLVKGYGPVLQVAEGYAVNIDDSIFDPINKRTDSTWPTTWFAPILTGKDSFKDVYSVMNDWGANHCAAAYGHIGADLITLASMLRIPVSMHNVSEDRIFRPKAWKAFGTKDLEGADFRACKHFGPLFGKVTR >gi|343386951|ref|AEM22441.1| RbsD or FucU transport, 2088317..2088754 [Brachyspira intermedia PWS/A] MLKGIDPVVSPELLKILCEMGHGSEILFADGNFPSYDYNAKKIIRLDGIDIPTVLKAIMPLFPLDTFVESPVVLMQPNADFGREPDVWAKYKDIIGKHQKVNYEYLERFAYYDRCKNVYAIVATSELEIYANIILKKGVIFPDKK >gi|343386952|ref|AEM22442.1| gamma-glutamyltranspeptidase, complement(2088864..2090483) [Brachyspira intermedia PWS/A] MDFYDNTYPSKRNVVFGKNIVSTSNILASQAGLEILKKGGNAIDAAIATAAALTVVEPTSNGLGGDAFAIINFENNLYAINGSGFSPKNLDVDKILSLNLDQMPTYGLLPVTVGGIPATWATLVKKFGKLKLIDVLEPAIRYANEGYAVQPQVALDWKESYYTYLKESDKLKKEEFRYWFDTFTFNGRTPELGEIVKLPYHAKTLEDIGNTNAECIYRGEYSEKIDAFMKKYGGYLYKEDLNEYYPEFVTPITTNYRGYDIYEIPPNGHGITVLMALNILSHFDLKDLTPLESTHYKIEALKLAFIDTKKYVADIYHMKTSIEEMLSKEYAMKRASLIRINKALEPINHIFSSGDTVYLATADSEGNMVSYIQSNYCAFGSGIVIPETGIALQNRGANFSLDPNSDNFIAPHKKPYHTIIPAFICKDSKPYAALGVMGAFMQPQGHLQVMSNLIDHNLNPQAALDKPRWQWVGEKNIELEYNFDDILFSELSSLGHNITKKPHITNFGYFGRGQVILNNYNNVYCAGCDGRTDSGIAAF >gi|343386953|ref|AEM22443.1| TPR domain-containing protein, complement(2090623..2092722) [Brachyspira intermedia PWS/A] MQNKNYTLEEIENIINKECSYEVDETDSTEADDKLDNNENIIDQVIEVLKEYIKKDKNNVKALTLLGRAYYSNRDNKKAEKQFRKALLINPNDDKALYYTAVNYLYNFRGNEKYNEALKLIKKAIELNANDSAYWHLLGYINRENKNYYAAIEYSEKAVKLNKSYVVDDGNYMEYYLTVIGESYFKLGKYDEAIKVFKEIIKLPRHDQSDFMYLGLSYFAKKEYDKAIENYEKVLEIHPSCDYIENTSAINALAKSYMALGEYQKGIDAYKEYIKKHEWRWIRYLYNKDIEDYKYLIEAFNQLIDEEPSNFEYYDGLETIYSYDLRISDKAANVLEKYLLNNTDNIKHQVYGTLAHLYEEIYRYDKAIEMCNKLMEINDFDSYYYSLLGHIYQEIKNYDKAIEMYEKYLNFECRSSGNVYCNMAKLLDLYEQVSEMDKRDLFINKALNYYIDNNKYINAAKLYLHIGEKYKAIEYYQKYINLLDDNKKYKYDFTSIAEIYESLGEKENAEEYYKKAIEIYENKKDKNYWDLESIGDLYNSIGNKNKAIEAYKKAIKLEIKSASCMFRRENIWERKEFKGYYSRKIGDLYMKIDNKNKALKCYKHAVSLEPNREEYYISIAKVYNDINEKDLSKEYYKKAIDIDKKYFETRPYRCDTLKEMAELYLKIDDKENAKECYKKILEINIYDDEAKECLEKLNI >gi|343386954|ref|AEM22444.1| hypothetical protein, complement(2092791..2095073) [Brachyspira intermedia PWS/A] MENKNYKNYTIEEIKYLINKGINNEDIEEDDEYCYKESEKIIKKQLKNDVNNKELLFLLGLVQYGIYSSSGDEGKSIETFKKLLRLDYEKDKVLYYLAVLYYYNKPNSKILIKKIIELLENAIELNDRDSEYWYLLGRTYFYHIKDYDKSIFCYKKAAEINYTETMYNSKKYYHYELGKINLYVGSNIDAIKNLKKAIDNFDYSYNLSDAWYYLGLSYEKNNQYDEAVKSYENALYINADTRLDDYFYGSLYTVKSLYDLYKKLGKNDEAVYALENSIEKDSYIPFYFIPFPNRKEEYKNFKGSEIYNDIVKAYTNVIKNNSYNAEGYIHQLSYFYELYKEYDKAIELYNKISKDSYENIATIYEKTKNYYKSIDIYKMLINMYPDDASSYYSNIAYIYKKIKNYEEAINYYRKAIETDSKNTDYYINIAETYEKIKNYEEAANYYNKTIELYNGPCRYYKKLAEAYKNIGKYEKAIEAYKEYLKIVNNEHEVSFLYTVCFKLNTLKNIAHLYDKLNDIENRNLYYEKAIERCGELIKKYKSYKKMYLEEMADIYMKIGCKEEAFEIYHDLIKKYDKEILKNKKDYELLEKQGDLYVKIDNKEKAFEIYNKAIGLCLKKIERFKKTKISDTDEEYEDKISFCMEDLSYLALFYQKVSRYEESNLAYEELIKIYEEKVTDSEDSIFYLESIAELYIKLNKEDDALKTYKRILEIDKYNDAADKIKDIQSGNKIITANIFKLSHRKYIQHGQTEMVLKKFCI >gi|343386955|ref|AEM22445.1| hypothetical protein, complement(2095098..2097173) [Brachyspira intermedia PWS/A] MKKIYTLEEIKDLINRKINNDIIYNDADTVYYEIDAYKALKEYSENDPDNKELLFMLGLMEYDRNYIEEAEKIFARLLDVNYQKDKVMYYLASLYYEDSSMFHFSAKINIEEICKLIENAIELNNNDSEYWYLLGGINLYTNKDYNKALYYYKKAYEINHSEIIKNHKEKYYYTLGKVNLYLGNYDDAIEIFQKTIKDFRESEYFKYSISRDEEANYIHYLGLSYEKNGQYDEAIKSYKKSWSIYQNSCIDIESDRNREHIIKSIYDLYKKIGKNREAIRFLKASILYDISYPLKIIPSDIEEKDFKGSDAYNDIVQAYTLRIEERSFHNMQYIMPCREELADFYKTYKEYDKAEELYKIISIESYKNIARMYAEDENYDKAIDTYKTIIKIYPDDDSSYYSDIAYIYEKIKNYEEAINYYNKSFEKGNLGCSRRIAELYENINEYSKAIYFYTKYIDFSKNDFYVLKNIANLYNKLNDIENRNLYYEKYLEILKGFIKVEYDEYDTKEDLEEIESIYLEIGEKGKLLEVYDIAIRVFREKLKKYGECYRIYQYLGDIYLKIDDKEKSLENYNKSIELLTKKIDEYRNISKLDVYKKIDFHYIRYLSNLALLFEKVSRDDEYIPIYEELIKIYEDKMTDDVEHVFYLKTVAEFYMKLNQKDNALKMYEKILERDADNDEAKEKIRCIKLEQ >gi|343386956|ref|AEM22446.1| hypothetical protein, complement(2097230..2098954) [Brachyspira intermedia PWS/A] MKKSYTLEEIEKIIDENERGVNKNKDENEDIIQILDEKKYIAKILEEYLKKDSQNIKLMLLLAKVYNSIYQSEEAIRILKRVVKLDAYDDKNWFYLSYSYYCIGEHKKALINIKKAIGINDNDYIYFYILGFIYTRMSKHNDAFYNYQKASNINNTSISSEVLSYGVNLILKTCLKLKKHKYAVDFLKRLISIYNNDETLCVLGEAYLENEEYDNSIKCFNEILERNNKSYFHCMHSAFDSLILVYTKIKEYRKPVELYKKYIKEDTSIAYRFFKFTTGFKEIDNYEYCIKAYNELIEEEPHKIVYYEGLSGVYEFIFDLNKAIEVCEDCIKKNNSFDYDFYYDLGFLYYRTKQYDKAIEYYIKAVNIMDADNNNNRIFLNIADIYCYKMNKFNEALEYYNKAIHLDDENIIRCYEGIIYVFNKLSRFEERDILISKIIELYKKESIEYYLEETADLYAKIDEDEKSLSYYEKYYIENPEDIYVLETISEIYKKINQPDKAKEYYNKYTELLKKRFAEDPKYIKRLRKLAKSFLENENNIEIDLEKRMKAVGDIYKRVLILNPNDHEANKFFNK >gi|343386957|ref|AEM22447.1| hypothetical protein, complement(2099264..2100433) [Brachyspira intermedia PWS/A] MEELNRQNKKYIIQDKNDYYSTKHSLNYFLEELDKLIKKNNIEIKEEDKLIINDHHNCSVYTFIRVLEKYLIRINFEQFVHPDPETQKDLLDWGEYKCLLEKDKFPDIYEEYHNDKFPILDDEFSELHVYSEPSEENNFIGGYELLIPSWHYEYDDGEYRDFIEKEDDKKYAKEEMISEKYRKNGVIYFETKELVDEFFESGEVDSRRWYMEWGSENKNEAMKYFDERLDKHWEEEYQRELDKYNITDDDDCMKTYIIYDEEDIDYYFENRDLFSFPFFITGYNELFEHFYKKLMKDREEVNNSINDDIKEKCDKLLYDYILGYSPNHRFAPNKALYVLKEYIKENYKDNSKEYIDLALRYIMNYTRHLDRDKLIERYYKGDKRFLYKL >gi|343386958|ref|AEM22448.1| hypothetical protein, 2100641..2100895 [Brachyspira intermedia PWS/A] MAQNFYCEYCGTIYSSIGALTGGACIKHPDGPNKGKHKLYEGGEKSDYFCKYCGNKYHTIASLTNGHCIKHPNGPNKGYHSPAL >gi|343386959|ref|AEM22449.1| conserved hypothetical protein, complement(2101093..2101734) [Brachyspira intermedia PWS/A] MTRTNFSIIYKIIIIIIGTFAVLHGFFYDNFKLDIETAYYFTYQSNILVIVYFILDIFTIINKKETFYPRFKGAVTMSITVTFLVYHFLLSPTADKYEGLSYIRNLIVHYIVPIMTIFDYIIFDKKGIYKIIDPLLWLIIPFVYFAFILIRARIGSPFSDGSYYPYFFVDINKYGLKTVLRNVFFITLFFALLGYIEYFIDRFFNKLFSKHNK >gi|343386960|ref|AEM22450.1| ADP-ribosylglycohydrolase, complement(2101755..2102696) [Brachyspira intermedia PWS/A] MSLENKLKSAILGLAIGDALGVPYEFITRNIIKKDPCKDMIGYGTHNKKPGTWSDDTSLTLCLLDNLNNKNINYNDIMNSFAMWYDKGYYTADGHTFDIGITTSDAINNYKSEKNPIKCGLSDEYSNGNGSLMRILPIAFYINKYFYGKLFDNSEVINIIYNISSLTHSHKRSLIACVIYTAIALNLINDMNIEEAINKALKDSFNYYKNEKEINNYKRIFDSNFKKLNDTKIESSGYVVHTLEASIWVLLNTSNYKDAVLKAVNLGNDTDTTAAVTGGLAGLYYSIDNIPTNWIDILINKELIINICYKFLK >gi|343386961|ref|AEM22451.1| FMN-binding domain protein, complement(2102847..2103203) [Brachyspira intermedia PWS/A] MSLKKVLFLVVTVLFAASLFLFAQGKIDLAKIPDGTYLGNYKATYKTRQGDYQAKVTVAGGKLTKVVLTKCGHSSGPARGKAAYDKMIKANNIYVDGVSGATWVALVEDALTKLTPAK >gi|343386962|ref|AEM22452.1| hypothetical protein, complement(2103279..2103764) [Brachyspira intermedia PWS/A] MYNYVLKKNKILTNIWESYFKFGGYMKYGYIIIIIFALLVSCKSAEKTVNNNINFNEGWVNENKFIATSIGYPNGYAVTKDEIETSAFNAALALSKVKIENAFAKELPNKKYENDELKNIVEKYIKVEYSSFVDDRYCQIKTTVEYNNLLGLLRNGNIKKC >gi|343386963|ref|AEM22453.1| hypothetical protein, 2103837..2105453 [Brachyspira intermedia PWS/A] MKKLYIISIVFLLLCARGFTQIYTFQIGEKLNNSYILSESNYAIIIEKNNANSGKTFDIIYKDARLTGYKDAGSIKILPNGTLVATMLKTSLGKDMWVLIYGNVEQEFDSIEREIYSGNNSIIFTRLMNYGIAVINGEAKVQYSELYDSVINDNSYAFSYSRDGQYFVNINGEEKQVSAKADRLKFSNDGNNIVYVIENEGNAVIFTGSTDSEGFRLVDDLASFNNNSIAYAVKAIPGMDTNSTNMISSNDSMSNTFITNNMTNEVITNTTTITNYNLSNISVYTNEEGVTVKGQSNTIALMVVTNVITNIRYNELTDLPAAAVSTNSIISNEFIMTSVIANGRNYGEFNLVTNMSFSPDGKTLVFVNINSNNTMQLYVGGNMTTNYDMIHNYKYSDDSKILAYSAQTNNVSFLVVNGKRLPRTFDKINDIYFSTNNSLVYNASMNEREYIIANDFESPSYNKITSFKFVGDSFAFTAERLGKHYYFILNKNNSVRREFGGYDYVSAMDNNQEDALSIVSDGKNIFIIKNGVIVNNQQ >gi|343386964|ref|AEM22454.1| Predicted hydrolase of the metallo-beta-lactamase superfamily, 2105629..2107542 [Brachyspira intermedia PWS/A] MNNNNDKIRIIPLGGVQEIGMNMTVIEYGNELLIVDCGFMFPRYHMLGIDYVIPDTSYLEDKNIIGLILTHGHEDHIGAIPHFLRKFPDIPIYGSRLTLAFLRAKLNDYKNEYKDTKLYEVEPRNKIQLGMNFDIEFIRVNHSIPDGVGIAITTPLGVIIHTGDFKIDLNPTTDKFIDLYKFAEYGENGVLLMLADSTNCQRDGFSMSESVVQNNMTPLFAYEDGMIIVAVFASSIERIQDLVTAAKVNNKFVAFSGRSLIKFTKIAQDMGYLNLYDIVIPIDKINKYPREKIVCITTGTQGEPYSSLSLIAAEAHKHIKVEDGDMVIFSSSVIPGNEMAVTRMINNLFDLGAKMVGEDKKLLHVSGHASSEDLKLMYRLVKPKYFIPIHGEKRHLITHIKLVENLNGLDTKGFLLYNGDVLEIDETLEAKITEPIEIRNIYVDGKGVGDLEESIFYDREQLSLNGVVVANVVAKKNAAGQYDIKVDLESKGFTYTGGEKERIINKTEQLREEGISSAIEAVRKLLNRNKRTPSTIKYEVREALRKKFIQIIGREPVIFVCLYMDHVYIEQSHSSNDDNDNIDKNNIENIEIENNNDEEKEKCHTKKKKRIKKTVIKKNTSQIKRLKSKKKKAVKES >gi|343386965|ref|AEM22455.1| SppA, Periplasmic serine proteases (ClpP class), 2107686..2108531 [Brachyspira intermedia PWS/A] MNGIITHTKRKNGLGIEYPSVTEQLVSDFEYYLQHPKVKAIVLQVDSPGGSLTSCEEALKYLKELKEKYPKPIVASFRSMAASGGYYISMIADKIYANESTLTGSIGVISQFFNISELMDKYGIKMYTIKSGRNKDSLSPFRAPREDELAYWQDMTDEFVGQFTNVVEQSRGDKIKGNREDIFDGRVFSGKKALEIGLIDSIGTLHDAVKDAAQMGGIEDEEPYIIKKPKEKNDVLNLFFSNISEAIKPKSSFPFPYEEIMNTKYIGVPMYIYIPNYNGAN >gi|343386966|ref|AEM22456.1| hypothetical protein, 2108531..2109094 [Brachyspira intermedia PWS/A] MQLHEAIYYYLLKPKEAIKKSINFEYSFFVYLLASLSISISAIYTINNKSNILNLLILTFGIAAYMAISNIVKIAVINLTVSLFFKNSSNNIKIFINNCFGIYGIFIFILPITLLFSRFSTLYFIQVIMFFILGLYYIVLMFNNIKHSFNIDSSFKAFLVLITPIICDYLTYISLGILIFGSIINYI >gi|343386967|ref|AEM22457.1| permease YjgP/YjgQ, 2109097..2110350 [Brachyspira intermedia PWS/A] MKKINKYIILETIGPFLAGILFFTFVFVIQLLPELIRLIVNNGAPLLMSLEVFVYMLPFNIAITIPMSILMASIIGYGRLSSDNEIIVMRALGFPHMRIYMPIIILGFITFCFSLFFNNVVMSESNYRYRTLISYMVNIKPSIAVGKLEFSEIKDMGLSIGSKYANDTSMSNVVIYDKSKTKRVITAKYGLWKNNEANAQVVTLTLYDGVVQEMPDYGFVSNDYTVFDSMDINIVRNVSTLTSHERGLREMPSWKIMEKIKDSKAAANKSVDEQISGMINNAYKNVKKTGIDITSFSNEYIQTNAAELTSIREKAIDEAAPYFYYVEFHKFISIPAACLFMVLIGAPLGIVGKRSGKGFGFGLSVIVVVIYYLLITAAELMAGGKKVPPLIAMWFPNIVLALMGSFLMIRSFFSRGK >gi|343386968|ref|AEM22458.1| hypothetical protein, complement(2110813..2111145) [Brachyspira intermedia PWS/A] MMKNIIFCLVIILSIFTFSCEKDKSVIDKATDAINEKIDDASKAAQDGIEKAGNVTEKTLDNASKAVEDAMQKVDPSKVMDEASKSIESGLKKAAEGLDKAKENFSNSIK >gi|343386969|ref|AEM22459.1| TPR domain-containing protein, complement(2111194..2113233) [Brachyspira intermedia PWS/A] MLKDRIENMFIQARFYFNLEKYSSALRIYLKIINCFEKNCEELDTNYVDRYFARSCYKTALTLYYLNRYEESIEYYSKAIEINPLYEKAFINKGIILAKLMAFDEALYAFNMALEINDKSEICYFNIGIIYSKLERYEDALFYFNKALELGYDYAYLNVAMVLEKLGRIDEAFNIYDKAFEINKSLEVLYLNKASLLININRYKEAIECLDKALYILDENNSKGDTIVKNKEYIELNVMQNDTIYDRIYFLKSEALIGLEEYDYALTLLLDIKESRNVTIFNIISRFIEYINIEKIIDIVLNENSFWTEEKEEYFNFIVRDIKDISKLKKLWILQYIFLYLVSVKDDDKINEISHYTSIEVFDDMAFDKRYDKSDNSRYNTYLKKNKLRMTSIKNANDPKEGKILMQLLRNNKLNSKYGNINNFIALQTSFSRCKDSLTMYRLYGKYDNKEGTGCCLVFDKSFFDTSFNNLNNSILFSFSYDKNNYSNIEFYNEQTLPLYFVLYYNAKNNEIIFNPCESDYDNIVIDLNKEYDVWSYDKKFYDKLKNNIGYIFNSIFKIIKKFNSEELSLSYQLLMNIQYLIKDSSFIEEQEMRIIQLVEYGSNPLHIDDKMKRSYKNYLYIFDNKSLKEVILAPKVDDADFLVEKFNDRLAKATSIYNSKNMKNKYKVNVYISNAPIS >gi|343386970|ref|AEM22460.1| tryptophan synthase beta subunit, 2113399..2114652 [Brachyspira intermedia PWS/A] MKNSDKGFFGKFGGRFVPEALEKLLIELEEAFLHYINDKEFLSELEELRSDFLGRPTPLMYAKNLSEKIGGAKIYVKLEGLAHTGAHKINNSIGQALLAKKMGKKKIIAETGAGQHGLATAAACAKLGLECSIYMGEIDVKRQQPNVASMELYGANVVSVTKGGRGLKDAVDAALEDWVKDLKDTHYLLGSAVGPSPYPDIVRTFQSVIGRELDKQIQERNLNVKALIACVGGGSNAIGFFEPFIERENPKLIAVEAGGISMNLGENAIRMTNPYAKDIAAQGYMSKFILKEDGEISETMSISAGLDYPGVGPQLAYLGESGRIEFTYATDKEAINAVKEFAKNEGVIFALESAHAGAKAIEYAKQYTKDDVIIVNMSGRGDKDIFITSPIFRPDKWKEFLKSELERLEKNIDIHKF >gi|343386971|ref|AEM22461.1| hypothetical protein, 2114841..2116598 [Brachyspira intermedia PWS/A] MKRNLILSLIIILLIISCKKINLLGPNDIPPPTEFPDTEYPTPTPVPVPPIDIEEKPITVKPEIVSGKTVFGGYAKRFKYKNEWYVLATNEYEYDTDTKSLEKTGKAALLKIANDGSTITKIRSISPLMDLEDADYWTNLISDKLVIEANKVKVLSEAYTTSKFICIENPDFKKGNIVNYSMSGTFIIIKSFNENIKYVESDDLINWNYYLNPITKEYNMPNTNHINPNFLGRYGINTDEYFIVYFKEKIFLYTKYKSIFDEHPDGNRDPSKPPFDYYNNEYYIIDYGKDMSDAKNWTTNYFPDYNNEKLLVTMYFHTDNEKLYFSQGIFGDNKFVYNEKSGNWSSEASIKYQNICFSTEDGINWKADTLPSSDKLTDIRSYVFSYPNFEFRNNMIGYEEPNAAPLEPSYTELNGKYYRTINTTYPVPPIKEIIETANRLETNFTITEEHIKKSGTYQLQVSSVDPNKAQESDWVSIVPKNEINSVIGWESGGGNLFTFNNKIVRLADYDREFQINNQYENALNLSQKYYNMLKTAPTMEDYKNYNYYFLYYKSVADMIKMIKDKGNAYFMPDKVCTHYTFEVGN >gi|343386972|ref|AEM22462.1| major facilitator superfamily protein, complement(2116619..2117866) [Brachyspira intermedia PWS/A] MKLNYTHTLYASYIGYVNQAIINIFPPLVFIMFQKDFNISLTHIGLLSSFNFAVQMIIDFLAIKFIDKIGYRIPIVAAHIFSALGLFLLGILPFYIDPYTAILVCFFINAISGGLIEVLVSPIVEALPEKQKTKAMNILHSFYCWGSMAVVIFSTLYFNIFGIENWRYMSMIWAIIPFINIFLFSNVPLNVLKTHEDNMNSDNTVSIRKLLSVKIVLVFVILMICAGASEQSIAQWVSLFAELGLNVNKNVGDIFGACMFAFCMGIVRLIYGMRSESINIEKALIVSAFFCTVGYFVTVFSPYAFLSLIGCGISGLSVAIMWPSVFSLAAKNYNRGGTAMFALLALAGDVGCSIGPGIVGLVSNNRNIADRFSFVLINSDYIQAGLKTGILFAVIFPIIMFIVLILFKNRKNKSV >gi|343386973|ref|AEM22463.1| putative signal peptidase I, complement(2117909..2118640) [Brachyspira intermedia PWS/A] MNYSYDREELKKEKLNALKAVLKPFIFIYYRSNSLLYRVVARLILGFIIAFVLFGIFTLFIRIDRMKSSTMMNTIEPNEILITSKLRYGIALKPFVSSLTGKTIIFSRPKRGDIIFMIDPRTEKEFFLKRFASYFVYFVTFGNVNISNTRYLIKRVVGLPNETIEIRNKVVYINGEVLNEPWANVEFDGRILDAEVSTRDNFGPYIIGYNEYFVLSDNRDYGYDSRDFGNVHFSNIDGKVISK >gi|343386974|ref|AEM22464.1| putative Glu-tRNA(Gln) amidotransferase, C subunit, complement(2118678..2119001) [Brachyspira intermedia PWS/A] MTTDREELEALLYQTRLRIEESQKDEMLDRLNKDLEFIEGLFEVNVDGIDPLYHVIDLPEYLREDVQGPTLDNEVIMDLCRSGEYGYIVVPAVPAALENSEHQAKKS >gi|343386975|ref|AEM22465.1| transpeptidase involved in peptidoglycan synthesis (penicillin-binding protein 2), 2119303..2121324 [Brachyspira intermedia PWS/A] MNFLEIELNKDKKIISEDFKYRKRLIVVFIISILVAALLLIRLFYLQIIQNEHYDSLARNNKEQIIPIDAYRGEIYDRNGVIVAENIKTYTMYMIPVYLPKNYFEREELLYRVSKVFNIDLGHIKSSLEKVSKNSYESVEISENISMSQMSYLAERSEEYPGVYYGSKSIRHYPLGETMTHVLGYIGNISQEEFESKQAEGYRRNSVIGKEGVEQFYDKELRGIDGYEQWIVDSRNRVKETITPAIGKPIPGKKLILSIDSKVQKDAEDLIKGQVGTIIVSKPTTGEILAMVSSPWYDPNIFIGKIDRQKYAELINNPANPFWNKAIRGRYPPGSTFKLVTAVGALTEKRIGVNTTRFCGGGMLLENRFYRCTGQHGYVNMYKAIQYSCNTYFYNLAYELGPNFIKRYAEMLGFGDVTGIDLPGEKVGVVPSADWKRRKIGEYWWDGDTIQYVMGQGYMSATPIAVHMATSAIINDGVMYRPHVVKEIRSSQTDEVIYNNDKVIIKKLDIDKNIFTVVKEGMRMAVTGGTARNGAWSPNIKLAAKTGTAQNAQGKDHTWVTIFGPYNPRPTDDMIAVTVMLEHSGGGGGTTAGPIATAMLRSILGGEDAVEARNVIYARMQYIYQQIRLAREKMRAEAEAKANEENGETLENIDGEQQKQEEKTEEDERIKYE >gi|343386976|ref|AEM22466.1| putative rod shape-determining protein RodA, 2121388..2122632 [Brachyspira intermedia PWS/A] MTAGAIAVYSSTYSPESGKTSWMFLKFIFFCATGIVLIFISMFINYTKLAEHRMSLYIPMLGVLILVLIPGIGTTVNGSSSWLFGMQPSEFGKIVVIIFLAGYLDQIGDKIKEIKYFALAGLFISIPIGLVLLQPDLGTVLVYCFIVFIMLFVGGVPTRYIIALISIGVIGLSIPMFLEYKRMSDDIDNILFNFLSQRIYIGYLAGIFLFVSALLLTLNFYMNSKYVGLLAFTFFVLFLCMGAALTFDIGLKEYQKQRLLVFMNPQLTRLSSGYNIIQSLIAVGSGGLFGEGFLNGSQSQLNFIPQQVNDFIFSNICEEWGFIGSALVVLAYAVIFIRGTMAAYFAKDRLGALIVSGVIAMFLCHVIINIGMVVGMMPITGLTLPFISSGGSSIWTFSISIGLIFNVEARRYVH >gi|343386977|ref|AEM22467.1| SpoIIE, Stage II sporulation protein E (SpoIIE), 2122644..2123795 [Brachyspira intermedia PWS/A] MKNNILTEKILIVDSSIDYAKFLQNFLKESGYLCYIALSYDEAITMSYDKIPDCILVDYMLPNAGACRLSQHIKNDNMLKNITILFLTATNSKSEFLKAYECGADGFFLKSLDTDILLSKVKSYIRLKKAIESNIMYMNMLKQDIEYASKLQKSILSYGNTSIPKNDISIFHYAPNEVSGDYSGIKSINDGWYSILLADVSGHGVAASMLTILIKSFFDSHIVTNSHNTSPANFIKELNQFFIEENFDKNLFASVFYATYNNETGELICSSAGSPKPLFKSKDEILEIDVGGPLIGMTEDIEYTETKIQLNHNDILFIFTDGAYEIFDKEGKMFGDELLKNVFTKHSHKDVNVIKDSIIKELKSFSDNILSDDISMIILRRTN >gi|343386978|ref|AEM22468.1| GPR1/FUN34/yaaH family protein, 2123952..2124563 [Brachyspira intermedia PWS/A] MNNEVKVTQTLADPSPYGLFGLAVITFVASTQKLGLTTGVSGLIPWAIFLGCIPQFVAAIVDFKKDNVFGATVFGAFGVFWFAVAFIWLISMGVFGEAMKSSLDMKQFGVVCIGYFFLVGALTFGAAEAHKVLFFIFLAVDVLLIAMALNYLGIAPKETQLIAGIAEFVTALIGFYGCAAGVLNKNLGRVVLPVGKPLGIFKK >gi|343386979|ref|AEM22469.1| hypothetical protein, 2124781..2125506 [Brachyspira intermedia PWS/A] MKLKIGILTIVNLIAFIALLYMFDIFGVVNYYTLMRNKIAPNVPGFLTRFTQKPRVEDMTLLAREDLNKMRESFNLREKDLQAQESLIASRAIELNTQSELIEQDRQNLLNAWSNYQATMDESSQYQLVLTDLANKINSMPPQNSVALLNQLAANGSDDLIIDVLLEMDSIAAAEGRNSTTSYLLSLMDPNVAARILEKYEARSNPGNNTVPSSPNDFPNYLPDQMNNDAMLNEGIMDMGA >gi|343386980|ref|AEM22470.1| hypothetical protein, 2125646..2125834 [Brachyspira intermedia PWS/A] MLRLALIFVILFSFNIYSQNIDDKPMKINKNYFTDDGNLKNNRNLSVYAIRKLDLQINNFMR >gi|343386981|ref|AEM22471.1| hypothetical protein, 2125888..2126487 [Brachyspira intermedia PWS/A] MEIISMKKIILIFLAIFSFNLYSQNIDDKPMKINKNYFTDDGNLKNNRNLSVYAIRKIRFTDKSSYEMIILKNNYWYYYSLFQIEQNNKYNYIGTIAFKSFNQTEGLVGNIVYKDNFFTVEHTVMSNLKMYITFKYNDDKKIYLDKASMIVDIIDNSTISNTNEAKTTSKQVNGNVVPNKILYEDVTMDMISKLLSLDL >gi|343386982|ref|AEM22472.1| 2'-5' RNA ligase, 2126563..2127093 [Brachyspira intermedia PWS/A] MRAFLALNLNKEIKNKYSNILRINENIAELKKVSKDKMHITLVFFDNIKEEQIELIKKEVINSSPTPFNINFENISYFTNKFKDINVIFIKAASEELKNYVKTLRSNLDNINNLKYDKKDFKSHITLARVKKVYDNEKLKETIEEIDFTSSSFIADSITLYSSDFYNYTEIFTINF >gi|343386983|ref|AEM22473.1| putative flavoredoxin, complement(2127117..2127653) [Brachyspira intermedia PWS/A] MKKKIDVLDYASHILKEVKKGVLITTKANEKVNSMSVSWGCLGIEWNKNIFIIFIRENRYTRKLLDENPEFTVNIPVDNIDRNIIKVCGTKSGLNTDKIKELNLTLEDSNIVSVPGLRELPLTLECKVIYKQMQDSKEIPEDIKKQFYPQDVESSFYGSNKDYHIAYYGEIVDSYIIE >gi|343386984|ref|AEM22474.1| Fe-S oxidoreductase, 2127819..2129276 [Brachyspira intermedia PWS/A] MNKINRIYIGYPPFESDRGVALLSQNRQFQWFKSPTYIYPVVPATAATMIKNAGYNVDFIDAIARNMTTKEWHQYLEANTPDLLFFEVKTPVIYKAWKIVDDLKEKYPNMIVVIAGDHVTAMPEETMNNCKVDYLLTGGDYDFLLLNLIEYLNGKAQLEKGIYYRESNTIKNTGFFELRHDLKSLPFIDRDLTEWQRYAYDNGNFKRIPGTYIMAGRDCWHHRCTFCSWTGIYTNFRARTAENVVDEVDFLYNKYNIREIMDDTGCFPVKKWLNDFCNYMIDKKLNKKVNIDCNMRFGACNEDEYRLMKKAGFRFLLFGLESASQNTLDRLIKGNKVEEILPSCKAASDAGLSPHITVMLGYPWETEEDIEKTYELTKKLLLKGYAKTMQATIIIPYPGTELFNQCKRENWLTTENWEDYDMRTAIMKTDVGEEKIKSWIQKLYNLSFTPQFLMHKVLSIRDLDDIKYYLRAFKKVSKVHLKDFE >gi|343386985|ref|AEM22475.1| hypothetical protein, 2129352..2129909 [Brachyspira intermedia PWS/A] MARVKFMEYEEAQGKVKEAFDYQLKKSGNVTNMKKALLNDYATYEAFMGWYVSFDRLVEVVGKRAAMILAHSVSTTNGCMLCSLFFIRDLKAIGDDPKNLKLDEKEQLLSQLGMQMVKDPNGVTDELMNNFKKHFNDSEIVTIVGFAAQMMATNNFNAVLKIDLDESLIPIQGEFEKETWRAKNN >gi|343386986|ref|AEM22476.1| non-heme iron-containing ferritin, complement(2130018..2130533) [Brachyspira intermedia PWS/A] MPIIKEETVKLLNDHLNEEHYSANLYFNMAGWCEKQGLKGCSKFLYNHSAEEHTHLEKFREYINKAGGQAIMGEMKAPECNFNSVQELFEKVIKHEEYITSCINKLVGIAMDNKDYVTLKFLEWFVEEQLEEEELFNDIIKKIKILGNLEGRNLYTFDKFVGNLDTEEHNS >gi|343386987|ref|AEM22477.1| methyl-accepting chemotaxis protein McpB, complement(2130683..2132527) [Brachyspira intermedia PWS/A] MLYVGKITKNLSYKILEETSLKEANDIKFNIEKHLYSVLGLKVNIENIYNRGIRDRATYKQLTSVFFNSLPDDINGLSIAFEPNALDNDADYTNSEYRAANGRFNYYISRNGESYLGIDTFNVDYYTEPKRTGSVYVSGVYNSTVNADTVLFTLCIPIMPNNKFIGVIYVDIFADSIVALLGNINIFEDTTVALYDQNGLVVYDSYNMDNVSKNVYEVYPHYKDYNVLENIKNGKPLMVEGYSDVSKEELLYEFTPIEISKGVFWCLELASAKNVVLKDSIAMSYVLLIILISIIVILLLLIPYIIGRKVSSIISSLSKDILAMSEGDLTREIPKHFDKRRDEWGDIARGWDKAMKNFNNVINTVKNSAEQVSTAANEVLIGNNDLSQRTESQAASLEETAASMNQMASAIKESAENVSTSTNMVSEAKEDLVKAGNIVEDSVSKMNDVYESSNKIMDITKLIEGIAFQTNILALNASVEAARAGDQGRGFAVVASEVRNLAQTTQESVKNITSLITDSNEKINLAAKSVQESKEIFDEISDKMDKASSLMDRINIAAQEQERGIEQINIAISNMDTAVQKNAALVTEATSASESLLSEANELVRSIEYFKLKY >gi|343386988|ref|AEM22478.1| dihydroxy-acid dehydratase, 2132862..2134544 [Brachyspira intermedia PWS/A] MSFRENSSLRSDRVLKGDERAPNRSLFYSMGYTDEELKRPLIGIISAYSEIVPGHIHLDKLSQAVKAGVLIGGGTPILIPAIGVCDGIAMGHLGMKYSLPSRELIADSVESMVIAHGLDGVVLVPNCDKIVPGMIMGLLRMNIPGIVISGGAMLPGDHGEEKVSLSNIFEAVGAKKANLINDAELEEYAQHTCPSCGSCAGMYTANSMNCLSEALGIALPGNGTIPAVYSARTLLAKKAGMQVMELLKKDIKPLDIITPESFKNALAVDMALGCSTNSVLHLLAIANEAGIELDLKIINEVSDRTPNLCHLAPAGHNYIEDLYKAGGIPAVMKELDKGGFINTSLMTATGKTIAENIKDAVNKNNNVLRNIENPYSKTGGIAILWGNIAKDGCVVKRSAVADEMLVHKGPARVFDSEESAIAAIYAGKINKGDVVVIRYEGPKGGPGMREMLNPTSALAGMKLDKDVALITDGRFSGASRGASIGHVSPEAASGGEIAFIKENDIISIDIPNHKINLEISDEEMEKRRKETAIKPLEEIRGWLGRYRKLVQSANTGAVLK >gi|343386989|ref|AEM22479.1| glycerol dehydrogenase, 2134893..2135981 [Brachyspira intermedia PWS/A] MSLENLFLPNFSIGSDAYKDIYDVCSNYGKRAVIISGKKSIQASIESILNNIKDITITGMFHYGDKSTFENVDLLKEKKAVMEADMIFAVGGGRALDTSKVLAHTINKPIFTFPTLASNCAAVTSLSVVYNNDGSFKKMFSDKRPPLHTFINTDIILNSPENYFRAGIGNAVSKQYESLFSTRNENLNYKNFLAVEIIKNCSNDILKHYSEAINDFQNKKVTDVLNRVILHIIYTTGLTSVMAKDDHHISLAHGMHNGLTKVKRIGDNLLHGELVSYGILLLLTMDKQFEERENIFKFNKSISLPTCLKDIGINKASLEDEELNNALEIALAGKDLNISPYKVDKNMILKAIIDLEDFNNKQ >gi|343386990|ref|AEM22480.1| transporter, 2136014..2136961 [Brachyspira intermedia PWS/A] MIKMKTLKQISNFFGKYMAVIVLIVAAVSLFFPKTVSFIKTSYVNYLLMIVMFGMGLTLKLEDFKVVFTRPKDIIIGAIAQFTIMPLLAFLLSIIFKLPPELAVGVILVGTCPGGTSSNVMTYLAKGDVALSVGMTSVSTILAPFATPLLTLLYAGQKVDVNAVSMFVSIVQVVILPIALGFIINKFFYKFTNSIKEILPLISVLAIVAIVAAVVSANSQRLMQVGYLVIIVVVLHNCLGYLLGYLLGKLFRLNNAKCKAVSIEVGMQNSGLATSLAATHFASMALATVPGAIFSVWHNISGSIVANIMASKIKD >gi|343386991|ref|AEM22481.1| hydroxyethylthiazole kinase, complement(2137838..2138590) [Brachyspira intermedia PWS/A] MKSKSPLVHNITNFVVMQITANALLAVGASPVMTFEKEEFEDMLSIASSLVVNIGTLTTVSIEAMHKACEIANKKNVPFVIDPVGAGATKLRTKTAIDLIKNYNPKVVRGNASEIMVLAGESIKTKGVDSTANVNMALEAGKHLAKEYNTVVSISGETDIITDGNKVLYVSGGSPLMPVNTGMGCTSTAITGAMLAVAEPLIAASSAMCIMASAGEKASKKCEGPASFSVAFIDELYKLDINDAANRVRE >gi|343386992|ref|AEM22482.1| phenazine biosynthesis protein PhzF family, complement(2138651..2139442) [Brachyspira intermedia PWS/A] MKYYIIDSFADEVFKGNPTAVCILEKNISHKLMQNIAMENNISETVFTIKNGNNYDVYWFTPKCEIDFCGHAVLAVAYAILNFAEKESNEVSLNTKEGILTIRKKDDLYEMDTPNYDLKPIEITSDIIEAIGGIKPLEAYIGRDIVCVLEDENQVINAKPNLEIIKKLDGLLFHITSDVKYKKNNQYDSITRTFGPKLDADEVDVCGSGHCHIIPLLSKKLNKDYFTAFQASPRTGVLYCDIKNNKLKIAGKACLYCISEIFI >gi|343386993|ref|AEM22483.1| hypothetical protein, complement(2139772..2141124) [Brachyspira intermedia PWS/A] MDNVSNSESVLSSDDLANIKFSKSVYLKFIILSFIGIFMLFIPIKIGDVKSIPIDHLVSFIRKIPFVDPYYGILITMFGGIYPFINKSWNKNKTEIVFSFIKLTSIPFIIMAYFGLGPADFHKPNMLLFSYNLLTQIALINSIGFIFLSFLVDYGLMSFAGIFMRCIMKPIWKTSGRSSLDAIASFVGSYSIALLMTSKVYKKGFYSKKEACIIATGFSTVSTTFMIVVAKMFGVIDKWNIYFFGTMLITFIVTAITVRLYPLRNKPSDGYMDKEVAEEPIYKGGNIFKLALNEAAEVASHSDSVLNSVVKNLKEGLIVSISVMPNFMAITFIGLLIVNYTPLFDVISYIFLPITKLLGLGDEAYIVAKACSVTLVEMSCSSSIVMYASQFAKSVVAVVCVAEILYFAAPIPVILAVGIPIKIRDMMIIWVERIILSLLFAVPFAYFFLS >gi|343386994|ref|AEM22484.1| hypothetical protein, complement(2141390..2142316) [Brachyspira intermedia PWS/A] MKDNKNYYTIIPSAVRYDKRLKPLSKLIYGEITALTNDKGYCWANNNYFAEIYSVSKDTISRAIRQLEEYNYIKCIYDKSKQNNEKRKIYLNKKLSISKMPIRYSKNSTDGIDKKVEDNNKYNNLNNKENESDNKNDSDKINKTDNINSLSSSFDSFVNELINTFNFLTGSKASKLYQVHSFKTKYKQEEIKSIFDDRKFDWKDCINLAKKKVKDKDNLSGIWLDFLSYLKIYLIKGDRENTIKRHYSKEELIKREEKIKEIELIKMQKEREEKLKLLEEEKRLGFDKMTEDEIIEFTKRNLMFLKRA >gi|343386995|ref|AEM22485.1| hypothetical protein, complement(2142397..2143740) [Brachyspira intermedia PWS/A] MKKNILFVFSDQQRWDTMGIYGQELDVTPNLDKLGKEGTIFDNAFTCQPVCGPARASLQTGLYSSKAGVFVNAISLPENITTIAKLLNDNGYQTGYVGKWHLATDGLGGDSSKEDYIFNPIPEKKRGGYKNYWVASDVLEFTSDGFKGYFFDKDMNKVEFEKYRVDAVTDYALDFLDKRSNDKPFFLFISYLEPHHQNNKNKYEGPLYSKEKFGNCKIPEDVKALGYGDSRENYADYLGACNSIDYNFGRIRAKLEEKNLLDDTVIIYTSDHGSHFRTRNKTLPENGYDDYKRACEDAAIHVPLIIKGDSFNGSKREEKIVSLIDLPPTILKIAGIENADMDGKAIQNIIADNNHENIAFLQISESFVGRAIRTPEYTYAICDPNKNPAKDKDSLNYQSYILYDLKKDPLQLNNVVKDPSYTEVLNKLKSIIKDKIKKIESLDVTID >gi|343386996|ref|AEM22486.1| sulfatase, complement(2143762..2145252) [Brachyspira intermedia PWS/A] MFDSLNKHFLEPYGCTWTKTPNFQRLADKAVTFDNCYAGSLPCMPARRELHTARYNFLHRSWGPLEPFDDSAVEILKENGVYTHLISDHLHYWEDGGATYHNRYNSWEIVRGQEADHWKAVLNFKDLPKKYLGNINKQDQINRKYMEDEKDHPLSKIFQSAFDFLDKNINNDNWFLQIECFDPHEPYFTYDKYKDNYDFNYGDLYFDWPNYSKVEETNDEIEHCRYMYAALLSMCDNYLGKLLDYIDNSKEDIVLIVNTDHGFLLGEHNCWGKNIHQLYNEISNIPLFIYESKKHNEKNINNRRKALVQTIDLPVTILDYFGIEKTKDMKGFSLKETIDNDNEVRKYALFGMHANQICITDGRYVLMKDYALKKDGSNDTELYNYTLMPMHMVNFFSIDELKTTELHDAFSFTKGCKVMKIKYLTLPKKMTLIDELDWVLYDLENDPHQENPIKDDSIKNEMIKNMVLLMIENEAPIEEYIRLGILEEYNKYKNMH >gi|343386997|ref|AEM22487.1| ABC transporter ATP-binding protein, complement(2145277..2146020) [Brachyspira intermedia PWS/A] MEKEIKVKVNNLVKKFGDLLVLDNISFNVNKGDLLCVVGPTGCGKTTFLNSLTKLYDITSGEILIDDEPVNLKKHNIAYIFQENSTMPWRNVEENVAFSLDVKKIPKEEKKRRVDEFIEIVGLSKFRKYYPYELSASMLQRVVIARAFAMYPELLLMDEPYAQLDIELRYKLEDELVKLWQRTKTTVIFITHNIEEAVYLGENIMVLTNKPTKVKTIVENNMPRPRDIADKEFVRLRNYVTDLIKWW >gi|343386998|ref|AEM22488.1| ABC transporter related protein, complement(2146043..2146516) [Brachyspira intermedia PWS/A] MGNVEYGPRIRGVDKKTRREKAQYYIDLVGLKGFENSYPIQISGGMKQRVGIARAYCNEPAVMLMDEPFGALDAQTRYLMQEELIRIWEKEKRTIVFVTNNVEEAIYLADRIIVLNECPTSIDKEYIIDLPRPRSYVDSKFLSLRKELSALVSDRIV >gi|343386999|ref|AEM22489.1| hypothetical protein, complement(2146794..2147579) [Brachyspira intermedia PWS/A] MKSNKFKEAYLSFFAAVTSIVVFIILWQLAVSFSDLGKLMPGPFTVIYNFFYTLVKPIGKYSIIGHIAWSLSRVLIAYVAAAILGITLGVLMGWNKYICAIFDPIYQLIRPIPPIAWIPIAILWFGLGELSKYFLIFLAAFNTITLNAYYGAKSVDKTLIGASKMLGANELQTLFTVVLPSSVPVIFAGLQVAVSVSWATVVGAEMVRSSEGAGWVIINGQETNNTTQILVGIMAIGIVGYILAIIMRKVEDKLCSWNKNS >gi|343387000|ref|AEM22490.1| binding-protein-dependent transport systems inner membrane component, complement(2147579..2148211) [Brachyspira intermedia PWS/A] MKLYDSSPDGATMIEHMASSLQITLIGYFLGLIIGIPLGILMAWYKPVDMFVRPLFDLLRPIPGIAWIPLMIIFFGIGIMSKAMVIFLSSFIACVVNSYSGIRQTKDVHIWVGKTSGASNWQLLYMIAIPTSIPMILTGVRSALGASWTALVAAELLASTKGLGFMIQQSRGMYRTDIIIAGMIAIGIIGSILTYLISLIEKLILRGAKW >gi|343387001|ref|AEM22491.1| hypothetical protein, complement(2148378..2149376) [Brachyspira intermedia PWS/A] MISCGTKTASSSKKIRVGTMVNTVALPIAYALEKGMYSNEGIEIEILTFASGAPINEAFAAGEIDIAASGLASVFALAQGNAKWIGEVNTTGGMGIFVRKDSPIAKEVGKVAGNTSILGSVETVKGLNILGPLGTTAQFNAIGYAKKFGLSGTDIKMIHMDNGPAYQAFVAGEGDAIAASPPHSFQARDAGYVLAATFEDATDVVSMDGIYVGNKFLEDRRDEVVKFIKATYKASEILSDYKTRYDFEKDWFERNGRVYDDKTLDNDIKYKVYVTPAMMQEETYVFGDGMTGTAQFFYEDNKISKDTLPNVQKSYDVSVIKEALGIDVKVDQ >gi|343387002|ref|AEM22492.1| arylsulfatase regulator, 2149624..2150742 [Brachyspira intermedia PWS/A] MNNVSVLIKPSSSLCNINCKYCFYIDEAKNRKIENNGIMTEKVMKAIIDKVLQNADKNALFSFQGGEPTVAGFEYFKSFIDYVNISNKKNININYSIQTNGLLIDDKWCQLFKENNFLVGLSLDIIKDIHDNYRVDKSNNDTYNRVLETKKLFDAFNVEYNILTVLTSELSKYPKDIYKKIKKLNIKYTQFIPCLSEMNSPSTEYSIKPKEFSNFYKEIFSLWKEDFFNNNYYSIQFFDNIIPLFFGGYPPMTCGINGTCTNQIIIESNGDVFPCDFYCLDDYKIGNIAEDDLMQIYSSSKAKDFINEKSNRINDDKHTLCRSCRYQRVCSCGCKRMENNMYIDESGEFCGFKDFLDYAINDMAIVWKMISR >gi|343387003|ref|AEM22493.1| Excinuclease ABC, C subunit, complement(2151087..2152928) [Brachyspira intermedia PWS/A] MNQEVKSYIHDKLKRIPDKSGVYFMKDSKSEIIYIGKAKSLKKRVSSYFNNSNKDAKTTALVEHIRDIEYILTENEVEALILEAEMIRKHKPHYNILLKDQKSFPFIAITNEHFPRVIKARNVIDKDNARKYKKYYGPYVAAERADNIVKFIIDNFKLRRCKYDFPLKRPIRPCLYHHIGKCTAPCADLIKEEDYDKTIDDAIMVLEGNVDELVARLKQEMFVHAEKLEFEAAKDLRDKIDLLKYITVEQSIYIPESDDIDIIGAYGENGNYTIVILSVKGGKLADRKTFSMQSPNDEDYYNENNMSKYSEILSAFFTQYYTHANLIPASISTDFPLNDVDIIKDYLKQVSGRDVDIKLDKSRKGLMAIANENAKHLFKEKALIREVPLGITRLQEIFKLKKAPSIIESFDIAHIQGSYTMAGMVRFVNGVSDNKNYRIFNMKTVTGIDDFASIKEAVYRRYKRLRDENLTFPDLILIDGGKGQLNSAIEALKELDIKGQPIMALAKKFEEIYLPNRNEPVQLSDNEPARLFLQKVRDETHRWVNSSHGKKRSREMVRSELESIEGIGKKTIEKLYSHFINIDNIKNASFESIRNIPGISYKAANNIYDHFHK >gi|343387004|ref|AEM22494.1| putative purine phosphoribosyltransferase, complement(2153084..2153482) [Brachyspira intermedia PWS/A] MEYDIITWENIDEAIEILAKQIEDSKIHYEVIYGLARGGLVPAVMLSHRLKIPMVLNMEEVWRLKVKNKAALIVDDISDTGETLKYFDDQKFDIATLFVREHTSKIKPRYSYKNINHDNWLLFPWETKSSSK >gi|343387005|ref|AEM22495.1| phenylalanyl-tRNA synthetase alpha chain, complement(2153503..2155926) [Brachyspira intermedia PWS/A] MRVPLSWLKEFVNLDGFSVEEIAKQITLAGSEISSIETTGGDIPSVIIGKIVSVHKHPDADKLSVCKVDVGDGDTLSIVCGASNVREGIYVPIAMIGAKLPNGLTIKKASIRGFESNGMICSRTELGYEEAEGVYGIWILDEDIEKVHADKDSILGNSLSTIVGSTDHIFNVEITANRGDLVSIIGFARECSLVLERRVSIPSVNTYDAAGGNIDITVENQESCYKYVGRLIKDITVGPSPDWMQKRLKMCGINPINNIVDVTNYVMLEYGQPLHAYDFDKIKDGKVIVRNARSGEKITLLDGREIDLTDDVLVIADSEKPIGVAGVMGGDNTKIESETKTILIESAYFDHIAVKKSTIATKTKTDASYRFERDIDHTLTLAALNRVVDLIVTLDNGCKIASRSKEVNVKQFDANIIVFDCGLVKRYLGLNMNKMEISSIFKRYGFKAVALGENNLKVEIPYYRHDLSIAEDLIEEIARVYGYNNISSNVPHIKCNPINTDYSEVSFVKHRMASYGLYETKQYSMGDSNVFKSMGIEEEKLIKVVNPLTNEMDVLRPTTLASLLDSVAYNQNHRHKNGALFEVGNIFYKENENFMEEKHLSAVMFGLYQEKLWNKEARAYDFFDMSGVIEELLIRDLKCTDYNLIPKEHKWFIPTMSGEIVIFGEKIGIIGRLHPKLLKLFDISGEVYFLDIDIRKTLKLVKERVKKQKLKDIGKYPAVFRDLALVCSNNIEFSKVIKSISKFNNIIQNVSVVDRYVGEQVEEGKQSIAISITYYDPNKTLREEDINSVEKSLLEMLKTRFDINLRA >gi|343387006|ref|AEM22496.1| phenylalanyl-tRNA synthetase alpha chain, complement(2156041..2157060) [Brachyspira intermedia PWS/A] MENLEELHSFLKNSIENANTQAEIDDIRIRYLGRKGKITELLKSLSSIDNIEEKKEFGKKINEIKNYCENALSEKKNAISEQEFLSSLEKNKIDITMPGRRPKSASINLLTRVEEEIVSILTEIGFRVVEGNEIEDDFHNFEALNIPYYHPSRDSHDSFFISKEHVLRTHTSGMQIRTMLETPPPIAVVSPGKCARRDAIDSKHSPVFHQVEGLMVDKGISFNDLKGILELFCKRMFGDKTQIRLRPDYFPFVEPGADLSATCVICGGSGCKTCGGEGWLELMGAGMIHPNVFKHVGYDITKYTGFAFGMGIERVAMIKYGITDIRMFYENDIDFLKQW >gi|343387007|ref|AEM22497.1| hypothetical protein, complement(2157172..2157975) [Brachyspira intermedia PWS/A] MNINDINYIIDDYIKIMAKNNNIDSIVLSGSKTSLINDDMSDYDIYVYCKASAKSREDMDSRKEFASKYASYFEIGNDYFEHGDEMILKESGICLDFMYRDLSWIEGEMEYVWRGCNSKIGYTTAFLYNIKHSNILYDKEGKFKKFQDELNLEYPEKLKNNIIEKNFNVMYGKKIASFYEQLEKAVKRNDIVSINHRISAILSSYFDILFALNKELHVGEKKLIQYALKLCRKIPDNFDKDIKNVIFYDENILEKVKILIENIQKIL >gi|343387008|ref|AEM22498.1| hypothetical protein, complement(2158079..2159815) [Brachyspira intermedia PWS/A] MIKNLINKNKKLYFILLLLILIIVLMISCKKINILGPNNIPPPTDFRLPEDTIPGHIDVNPMPAKNGEVFGSFQRKFKYQGKWYVLADYMYDYDPKTKTLNRKAEDIILQIDNNGNIVVYDKDSKGYRYLLRMNVIEENRVLYEDDYYGSYSYSSSSFTTTDCKGEEDYHTFSTGITFNNEIRTSSDLINWTTEGSRNNVYKAFPSVSTDPNASFQGRYGARGYKIVEFKDYIYLIGLEEDFREQNALDGCRNENQGPFTVSKNVYYRIDKNKDTSIGANWEKINTLWGQRSSLNVRYDKDKIYVTKGERSYWEWIGPPYWTPKEQSFENDSTIWSSTDGVTWNIERNSADYDNAEEISSYYDIAVGGNLPYIKNRIKTPEEPDWIKLDNGRYYKSDNSPYGTYTINNKTYYVPIPPYEEIRAAYDSGQEYFTITEEHIKSAGLNQFLTKDKEPNKDEDWTVITPIDYTDKLMVWQSGGEKVMLNINNKAVQLVDYRQIEAMYNSIKEYSIVINYLRKTAKELRDGTYWSDFANDYIKDVLLGMEYDARADMLELLKSNREYIMPDEAVTHYTVEFKY >gi|343387009|ref|AEM22499.1| MATE efflux family protein, complement(2160018..2161358) [Brachyspira intermedia PWS/A] MTKDMTVGSPFKTIIYFSIPMLIGGIFQQFYGVADTIIIGKFAGSRALASIGATTSTMFFFLSFAVGFTNAFAIVMGQFFGAKNDNMLRKTFLNSIYVTLGSSLILLIFGLFFLKPLMILLKTPDDIIENSIIYLRICVGLSFGQLFYNGAASILRALGDSKTPLYFLILTTVLNIILDLIFVVLLNMNVAGVAIATVISQMISAFLSILYIIKKFPILKLSKDDMSFDSNNLLMIIKIGLSMSVQAIFLSIGEMIISGVVNTFGTNVVASYTTGNRINQFASMAFFVISEAFAVYTAQNFGAGKIDRIKSGFKSIILLSLSLSILATVIIFLFGDHLVRIFISSKDEYIDIISEICKGYLRISSLFYPFLGIIVLYNNSVRAIGKALIPLISGITEIIIKIGGSLLLSIPFGYIGVWFANPVGWAVGIIPTCIYFHKYAFKIKRQ >gi|343387010|ref|AEM22500.1| von Willebrand factor type A (vWA) domain containing protein, complement(2161374..2162261) [Brachyspira intermedia PWS/A] MFKDSNITTQDLLRSVRQIEIKTSKIVNSYFAGQYHSAFKGQGIEFDEVRKYTIGDDVRAMDWKVSARYNEPFIKRFREERELSVVILADFSASTDFGFTKTKHNLIVELSALLSFSALKNNDKVGLLIFTDTVEKFIPLNKGKNHVLRIIRELIEFNPKSTQTNVASALEYFNRIQKRDSITFLITDACSELPKKEIDITRKRHDFIVCLVNDSLEYHLPSLGGTLVLSDLENDDYVYFDMSNKKIREEYFNEQNRIMEERLNFLKRNSIERIVLDTSSDYVNDVMKFFVKRRR >gi|343387011|ref|AEM22501.1| ankyrin repeat-containing protein, complement(2162591..2163739) [Brachyspira intermedia PWS/A] MLRKSLIIIFLFIAGILYSQESQDPPVSIPIIKAIANNDIKTLQKLIKDGADVNVKDAEGNTPLIWASLLGFDKIVEELLSNDADINMGNSFGNTPVMAAVLEGKSSTVRILISKGADLNLKNKDGWTAVMWACVNGNLSVLKMLVNAKAEVNIKDVNGSTPLMVASDSGYADIVRELIKLDTNVNEKNKFGDTAIMMGAIIGDVSIVRELIKAGANIDEKGSNGGSALIYAARFGRTDVVRELLKNNADINITADDGTSPILAACIDGHSDIVKELIKNNADINKADNVGYRPLIVSAIEDHIVIVEALLKAGADIEATTNEGYTALMGAAIRGNLEMAQVLLDAGADINHKASDGKTALSMAEEKEQEEMVNFLKANGAK >gi|343387012|ref|AEM22502.1| metallo-beta-lactamase, 2163976..2164743 [Brachyspira intermedia PWS/A] MDYLNDNTPLKPTKVFDNVYCIGTVSVVAWVISTSDGLILIDSMWDDRDAKLIEDGIKGFGLDPKQLKYIILSHGHGDHYGGAKYLREKYGAKVILTKTDTDLMYNLNTGANSPRSPKTKVDIYSKDKDIIKLGDTSITILETPGHTAGCTSFIFPVKFRGKEYTAVLWGGTGLPKDRDLISKYKTSAEYFKKEAISRNASVSLTAHLFADNGYANLEKVGNLKANEQNPFIMSKENMEKYLNSLIERAEKELNK >gi|343387013|ref|AEM22503.1| putative transcriptional regulator, 2165020..2165247 [Brachyspira intermedia PWS/A] MIDKLELKSFIIRKENKLDKRAFSLFLTDKAKENLPIMETYENKVLENIVKELTEEDADKFISILEKIRKNISDV >gi|343387014|ref|AEM22504.1| truncated hemoglobin, complement(2165300..2165674) [Brachyspira intermedia PWS/A] MKYSEINNEGVEKLMDIFYAKIRTHEQLGPIFNGAVGIDDASWERHKEKIAKFWKTMLLNENLYMGNPVQPHINLLPFDIKLFDVWLDLFKECLNQVFEEKPAEHFYEVACNIAKNFKAVLFQQ >gi|343387015|ref|AEM22505.1| 3-hydroxybutyryl-CoA dehydratase, complement(2166110..2166952) [Brachyspira intermedia PWS/A] MKVGVIGAGAMGSGIAQAFAQTEGYEVYLCDIKEEFAAGGKEKIAKGFAGRVAKGKMQQADADKILAKITTGLKEICKDADLIVEAAFENLEVKKTTFSELHKICKPDCIFSSNTSSLSITEISAGIGRPVVGMHFFNPAPVMKLVEVISGLNTPRDIVEKIIKISEEIGKTPVEVKETAGFVVNRILVPMINEGIELYSMGIASAEGIDNAMKLGANHPMGPLALGDLIGLDIVLAIMEVLQKETGDPKYRPSALLKKMVRGGLLGQKTGKGFYDYTKK >gi|343387016|ref|AEM22506.1| 3-hydroxybutyryl-CoA dehydratase, complement(2167009..2167785) [Brachyspira intermedia PWS/A] MEFIKYEEKGMIGIITISREKALNALNSEVLNEIEKAFDAVDLNNIRCLILTGAGEKSFVAGADIAEMSTCTKAEGEAFGKKGNDVFRKIETFPIPVIAAVNGFALGGGCEIAMSCDIRICSENAIFGQPEVGLGITPGFGGTQRLPRIVGVGMAKQIIYSAKNIKADEALRIGLVNAVYPQADLMAQAEKLANAIAAAAPIAVRNCKKAINEGLQVDMDKAIVIEEKLFGSCFETEDQKEGMKAFLEKRKVEKFVNK >gi|343387017|ref|AEM22507.1| acetyl-CoA acetyltransferase, complement(2167965..2169152) [Brachyspira intermedia PWS/A] MSRKIVIASACRTAIGSMGGSLSTVPAAELGAVVIKEALNRAKVAPNQVDMVYMGCVIQASQGQNVARQSSIKAGLPVEVPAMTINVVCGSGLDAVNIAANMIAAGNADIVVAGGTENMSLAPYALKKARYGYRLGNDTVIDTMVNDALTDAFNNYHMGITAENICDDWKLTREELDAFAANSQQKAVKAQEAGAFKKEIVPVTIKTKKGDIVFDKDEGPRAGTTVESLAKLKPAFKPDGGRVTAGNSSSINDGAAAVVVMSEEKAKELGIKPMATWIAGCLGGVEPRIMGIGPVAATKKLMAKTGLTIKDFDIIESNEAFAAQSVAVGKELGIDVEKQLNPNGGAIALGHPVGASGCRILVTLLHEMEAKNAKRGLATLCIGGGMGCATIVERE >gi|343387018|ref|AEM22508.1| D mismatch repair protein, 2169418..2171295 [Brachyspira intermedia PWS/A] MIKYKTMIKNIIKLPQSVANRIAAGEVIERPASMLKELLENAIDSGASNIEVSVEEAGIKSMIVEDDGNGIRFNELPLAITHHATSKIHSIEDLDSIYTLGFRGEALASISDVTNLEIVSKSVEESNGGKIVVEGGKIIEHKPAAASQGTKIIAKNLFFNIPARYKFLKHISREFFLVKEVFDMEALVQPKISMKLKNNGKVVSSYIKVDTLKERIENYLSDSNVFRNLIEVEIEKDDVSIYGLFSNSKISQSMRKNNFIFLNNRPIENRVLAYAIKNAYSNAIPKERYPFFFLYINIDSSKIDVNVHPSKKEVRIKNEREISGILYNTIVNNINSGNNFDSVNIEVDLDKDITPTFPIQQNNNYNTYNTPNYNTESADEIKYDNTSYSNNSYNKDDLNVENNNINDNIIEENSINKEINLNNNNFTYNNIEFGEYTRAIGQVFSSYIVAERGGEMYIIDQHAAYERLNYERIYKTLMSKKIEYEKLLIPCEIEYRDYEIDILNASKESIESLGIRFESNSKHSIIIEDIPIYIPRNQKIEKIIKDILDIYISKGDNNNLEKVIKHTCSTISCKYSPKAGDKLSNSDMQTLLDLLEEENILTNCPHGRPFVLRLSKEYLDKKFFR >gi|343387019|ref|AEM22509.1| hypothetical protein, 2171622..2172272 [Brachyspira intermedia PWS/A] MLIEIQRVGNQSFVYRSLYYWAKGYISNLRNNEKYNDLKQVIVINILDFNLLKDINKEHSCYVIKELETNHILTNHLEMHFLELPKYLSSSSKLTDKLYAWFYFLTIKEKREKMEKIMEMLVKKNPIMKEVYDEYNKFVNTKDLFENYSEYEKNYFDILALNEERIKGREEGLKEGIEQGEKNKAISMAKNMKARDMDLNLISELTGLSIEEIKKL >gi|343387020|ref|AEM22510.1| ankyrin repeat-containing protein, 2172581..2174092 [Brachyspira intermedia PWS/A] MKKVFIILFLFNILLYSQTLDESLFLAVEDNNIEEVKSYLAKGANPNARNEYGLTSLMTAAVSGNYEMVKFLLENGADINTKDNDGNTALYYNICYDHYGEEEKLENAKKIFNLLIKYGADVNTKDNDGASLLNKSYRASTALAQNREMFKVLVENGFDLESRIKAGEHSPDDYDYTPLMIAALRNDYDMVKFLVEKGADVNAKTHYSSEYSSVVTPLLLSLDDEHIESRYDENSSVAEYLINNGADINVTNEDGETPLMYASKLHNIKVVELLIQKGANINAFDNYGNTALIYGVNNLETVKLLVENGADVNFYKGGSTALISACEYSHERNIDVIKYLVSKNANINAQDNKGDTALNKTLDTSDEGSIDILDFEIANFLIEQGADVNIKNKREYTPLIYLGMGEGNFNNKSFQEYRIELAEVLLEKGADINAQDYNGYTSLIWACASSGSRFAEPFVKFLVEKGADVNIEDDHGDTALDIAEDLKLRKIAGILKKAQRNRK >gi|343387021|ref|AEM22511.1| uracil-DNA glycosylase, 2175066..2175815 [Brachyspira intermedia PWS/A] MNKIESYFLQQNKIKFSNVVCSQHNKKIILRNPKKAVKKEEKDIKDEGIELMKEIHNEELKKIYSEVEKCMKCEALCNSRLNVVFGRGDEEPDIVFVGEAPGADEDKQGLPFVGRGGKLLDKWIERMNINNKKYYIMNALKCRPPENRDPLPEEKSNCRDYFVNQLKILNPKIICALGRHGFGNLIDFDLKTPFGKARNKVHYYNNNGKDVPVIATYHPAYILRNQKEEDKVISDLEFMLSELEKIENN >gi|343387022|ref|AEM22512.1| ankyrin repeat-containing protein, 2175888..2176646 [Brachyspira intermedia PWS/A] MPNSFDNIIDASDYQTYENIEYSNIPKKPTIFDYINHKNELSDIIERINKYLDNNGDINAVNKNGNTLLMEAVAIGYYDLADYLVEKKADISITNANGENALILSAHYPYIMNLLINNNADINTADNNGKTALHYACEYGDLYSVKLLIKSGADINKKDILGKTILMYAVENEHLLLIKYLVEDLQVDINEKDDWGQNAMFYATKIDIARYLIYNDMNYTDVNSIGLKPYEVMKYNGYINVSNYLQKLEKRR >gi|343387023|ref|AEM22513.1| hypothetical protein, 2176752..2177549 [Brachyspira intermedia PWS/A] MLLFPQYLSLTNNNILVNIGEGRVDYTTYTIYADATADFVTDTRLHPEALLILQQQAEEETMKTLYDTLGNIPIDSEDNIYSIIEENRLLKEKVVNSINNARLVGISYPTRTSVKVLMALDIITNNLMSDLINNIHIYKPEPIVTYFDAGTDYDSLVIDARGVGFKPSLFPTVYDEDGNEIYSLAYINKNIASTNGYITYSTNSFLTNQNMTNTIGKKPYNIVAWRSRGRLSSDLVIGNEDASIIMSSPNLKNAIKNCKVVFIID >gi|343387024|ref|AEM22514.1| molybdate metabolism regulator, 2177624..2180914 [Brachyspira intermedia PWS/A] MSIIDSYIDDIFKNHPYKDDIKKYVNNENDNINFDTEETNLTISNNRSIYSNLLELYANDKQNESLIRLFKVISMQKIENIYIFEMLIINIISGMNVKDALLKCISIKKINDWNRDYKKYSYNVNPISNEIMNAKINILIYYYYAEKYFPKETNEYMENICSSNIDDIINEYGDNILIPLMALTIKIYFGDYSKISAILEYSQKVNYLDSIISLFIIVNIDDNISKRFKELIENNMLSGNENLFISLAYMIKLFFLTRKNYSEKFKNKSFDDFIYDLVDFNIPKYFIFLIKYLDTNLSINSNKVFEGIKNLYSKDKESFYKLYDILKKVEIPYIIEMKSVLNCVLLNAKDDNADVTVLDNSIDYFIGNIKKELEKIYDIKSDNIFELLENENIDKYDLSVNLSNELIFTTKIVVLMYDYNEKARKIVRALLKSLPYNLAIPLMIKDRKEFYDIKLKEILDYLQGYDLDLKDLIITYLYTYPIYIFSTKYILKLVTKNADYTVEMFHDKTFLKAASYKSYALIDFLELLYKKDKAGFTNYSAICYVLHLKNKEIINCALSLIEEDEYNSRAYVENSIHAYREDVQFELKKIIKKWNYRRKGFKFKTLDDINQYIDDYYEESYEHLIDFIDESLISDVVLRSDKNTKVPVKIIKYILLEYMLLKEPYRIKDIDRMIDLFDMNSIRSTFENVYKYWTDNNCEESKKNIILPYCIYADYSQIVNLYDKIEYWQENFQSSLAAYIIPAIAMNGEKFALMIINNIIYTSNNKVVKNAAIGSFEKAAECLNIPIDNLFDKVLPNLGFNVERNKVINYGKQQFTLQLLSDSYLEIIDNENHKILKELPDAIDGDDEIKVTEAKKDLIHIRNSLRAIIAYQTDKLKKVMFNARKWDYETFFEVFVENPVMQYFTLAFVWGVYDEDNNLIECFRYMEDGSLISIDEDLYELPKNIKYYISLYHPIDQDEDYQKVWTYQLELYEINQPIEQIKIKRYILNDNDVENDSIISLKGQKLSLEYMEKLSKELDMKTEYFDEYVSYYMADNVLKIICEINCSISDEDMIIDSIKFYELEKYNKFGRVISPFDIEKRFISTMIYYLSLGFYD >gi|343387025|ref|AEM22515.1| RNA polymerase, sigma 54 subunit, RpoN, 2180907..2182217 [Brachyspira intermedia PWS/A] MINNSLSANTSIRTAIKNDLRLNYQTRVWLDVISLPAIELKEKIQKAMEENPFLEYDFNDNYSKSSSSKASSDINSIIENTIENNKESLFSHLKSQIDITFDDKKEIELAEQICSFINEDGYLTIESGEISNILNADIKQIDKIISIIKTFDPYGVAAKNINECLSIQLKMKKKEADDKEIYDTAINIVENYLDELSKKNYEKIALNLNIEVNTVLKALKLIQTLEPYPAREYDTSSVKYIVPELFIFKENENWIVKTDETFIPHLKISKKYIKLLDREESKDNINFLKEKKKEAESLINASNDRKKTLLKIGEALLKFQINFFEYGKEFMKPLTLKDMSLEVNLSESTISRIANGKYLNTVWGTFSIKYFFSRAVNGGLGSRGVKEIIKRIIENSQAKLSDEKIRLILKSEGIDISRRTVAKYRKSMNIFSSRNR >gi|343387026|ref|AEM22516.1| hypothetical protein, 2182234..2183010 [Brachyspira intermedia PWS/A] MHQNIIGKNVRITKNVREHIANKMQNIKIHADRIIDANIICDYMHGEYTVQGTIAFGKKVFHDKEKEKDLYVAIDAMFQKIEREIRKSKERNIDRSQRAVVDKSVQADEDDDAYSINSVGIYEKPLDELDAVLHFNSDKKPYMAYLPIKQGEDLFSIKIGKFPVFLFKGNDNKVLEVYNKDEEYWNIDEVSVTPDNHIDASKSENYLIKEYNVSEAVNYLTENADKKFVVYISSITEQAEALYKESDNSFVLIRMFDI >gi|343387027|ref|AEM22517.1| PTS system, fructose subfamily, IIC subunit, 2183051..2183515 [Brachyspira intermedia PWS/A] MSLIDYINKDSIMIDVQETDKERLLSKMVERLDECKLLVSKDDAEHAIMAREQLMSTGVGNGIAIPHAKTDAVKSIVLSVATIKNGINYKSVDKKKVFAVFMLLAPKTSASENLKVLTAIAKILRDNPHFLEKLINVEKPEEIMELIAKEEMKI >gi|343387028|ref|AEM22518.1| Hpr kinase/phosphatase, 2183515..2184480 [Brachyspira intermedia PWS/A] MSKISVSKFLELNELRNNTLKIRRLTGLIGMENSIIGYDINRPGMALFKYFKDFAYERIQILGKGEANYIITLDEENKIDVFEEMLSYKIPICIFTYNITPPESFIEIAKKNNICVIISELKTSDMIRGIESLIEEEFVESFTIHGGLVEVFGVGVLILGKSGVGKSEATLELISKGHRLISDDTVEFKKLKDGRIIGRKNEYIKHNMEVRGIGVVDISRLSGMSAIRDKKRLDLIIELEHWKDNEQYDRMGLIDKTYNILNTEVPYQKIPVRSGRNVCILIETAAKNYRLKQMGYNSAKELDKALIAQIEKKRTDSTNNY >gi|343387029|ref|AEM22519.1| Septum formation initiator, complement(2184474..2184812) [Brachyspira intermedia PWS/A] MNENKQNIDKNEKKTYSIGSLFIVIILFVIVISIFTFARNVKANEILIELSKLDNEIERLEKEVKVLSAEEAEYSSPNRFIETAIINGFTSVSGDKNDILYLKIEDQNNNNQ >gi|343387030|ref|AEM22520.1| S-adenosyl-methyltransferase MraW, complement(2184827..2185729) [Brachyspira intermedia PWS/A] MDNNEELEIVHTPVMLKEVLSFIPENAKIAIDATLGEGGHTKAMLDLNLEVHSFERDSAILEIAKKRLKNYDKFHYYNNTYDKMIEELDDSIIGNVDFMLYDLGVSLFHFKKAERGFSFKDNVRLDMRLGLNEKSAYDVINGYSEEELERIFRDYGEISNARKMANVIIKERNRRKIETSRELENIIFHNTDKSQRYGKIHPATLVFQAIRIEVNDELNILEKSISNIPSILKPNGVVVVMSYHSLEDRIIKRFFKENEKTKNKDGIFKLLNNKVKLPTNEEIKSNPASRSAKMRIAQKL >gi|343387031|ref|AEM22521.1| hypothetical protein, 2185872..2186402 [Brachyspira intermedia PWS/A] MGKLGRVLWLIFGILLIISGIATLFNPIETVLMLAYIIGFLTIFSGISAIFYYFSLRDKSGSTLILLDGIVSTICGIIIISNLQISGAFVPYMAAFFVIVRGVVAISSSIELKKFGYNQWGLSMFSGILTLIAGIILTFNPILGAVYVSVVLGLALILYGIITLQLWFAFGKFFKI >gi|343387032|ref|AEM22522.1| nitrite reductase [NAD(P)H], large subunit, 2186482..2186700 [Brachyspira intermedia PWS/A] MFEKNLNSTICFCKNIKYKEVIDAIKENNYTTLEEVMHHTKAGITCWSCRGDIKDLLEEYKKTGKILSIKNQ >gi|343387033|ref|AEM22523.1| putative Fer2 BFD, BFD-like [2Fe-2S] binding domain protein, 2186722..2186901 [Brachyspira intermedia PWS/A] MTNNDFICKCKELSLEEIKSLEKEYGIKTLKELVQHTKAGTECGGCRNKLKEIFKFNLK >gi|343387034|ref|AEM22524.1| Transketolase, pyridine binding subunit, complement(2186969..2187886) [Brachyspira intermedia PWS/A] MEKKAIRNAYGEALKRLGEINKNVVVLDADLSGSTMTKLFKSAFPDRFFNMGIAEQNMMGAAAGLAIEGKIPFASTFAMFGAGRAFEIIRNSICYPKLNVKVAVTHSGISVGEDGASHQSIEDISLMRSIPNMIVIVPCDAVEAEKAVFAAAEYDGPCYLRMARPATNIITKEDTPFKIGKANVLREGKDVCIFACGIVVSEALEAAQMAEKDGISVTVVDVHTIKPIDREIVVEMAKKHKKLISVEEHSIIGGLGSAISEVLTDEYPAKLIRVGIKDTFGESGTVEELINKYGLNAKAIYDTFK >gi|343387035|ref|AEM22525.1| Transketolase N-terminal subunit, complement(2187926..2188723) [Brachyspira intermedia PWS/A] MSSLNTQIRKDIVSMVYNANSGHIGGSLSLVEIMHTLYFKIMNIDPKNPKMDGRDIFIMSKGHASAVLYSTLAHRGFFSTDELLTYRKLGSRLQGHPSKKNLECIEASTGSLGQGVCIALGAALGYKLDKKDAKVFVIAGDGEAQEGTFWESAMAAANYKLDNYTLIIDHNGLQIDGKNDEVMSLGDLEAKMKAFGFETYVVDGHNEKELEEVFNKKVSGKPKCVIAQTVKGKGVSFMENNVGWHGKAPNKEEYEKAMEELNKLD >gi|343387036|ref|AEM22526.1| endonuclease containing a URI domain, complement(2188807..2189001) [Brachyspira intermedia PWS/A] MSVEHYIKTMDKKVKTMFIENNRLLKSYYIKEMKNKKKDLNISISIRSVSKKDIEHINNIFHKE >gi|343387037|ref|AEM22527.1| spore coat polysaccharide biosynthesis protein F, complement(2189180..2189860) [Brachyspira intermedia PWS/A] MKKIVIILASRLGSTRLPQKALKPMANCDSMLELIIKRLRSSKRANDVIVATEEKSYEAFKNIFDKLKCSYFVGSEEDVLNRYRKAAEEFNADIVVRATGDNPLVSVKALDMIIDYHIEKNADLSHYDLLPYGSGVEVINYEALKIADDNSKDAFEHEHITQYHYRNPDKFKIENPEVKEEFAMPELRTTVDTIEDYNNVCKIFEKYNNDIYVDVDTIISDIRNGR >gi|343387038|ref|AEM22528.1| 2-dehydro-3-deoxyphosphooctonate aldolase, complement(2190487..2191302) [Brachyspira intermedia PWS/A] MIFDYKGITNKNKDLIFVAGPCVIESEEMTMTIAKKLKEIKDKLNIQLIFKGSFDKANRTSLSSFRGLGMKEGLQILQNVGKEFNFLTLTDIHVPTDAEEAAKYVDFLQIPAFLCRQTDMLRAACETGKAVNVKKGQFISGYDCKYIADKCTDAINENRLFLCERGTMFGYGNLVVDMKNLEIMKNYAPVMYDATHSLQMPSANNGQSGGAREFIPAILKSAVALGIDAVFMEVHPNPDKSPSDSGTIFDLNKVEELWTKVIKINDLVKSL >gi|343387039|ref|AEM22529.1| acetyltransferase, GT family, 2191773..2192318 [Brachyspira intermedia PWS/A] MKENLENRDFYKQLYNDAFPPEERWNFDMTLENKDNHNYKFYAILDDDVPIGLTMLWDLDDFNYGEYLAIDKNLRGKKYGSEVLTKILEILSNKLIVIEVEPYDLNEIAQKRIEWYKRFGLILADHEYDMPCINENQEISTMKMKIMTSRKIQDKEEHDNITKIIYNKVYKPRLDEIDKWK >gi|343387040|ref|AEM22530.1| acetyltransferase, GT family, 2192309..2192830 [Brachyspira intermedia PWS/A] MEIELIESIDSSNYNEEIIKDSFNIRENWSLKESLNNNKIKKNLYDIKKDNIHIGVCLSWLLEEFTYIEYFAIERKYRCMGYGSAALKKLIKMYDNIILEVVPEDTNDLAYRRVNWYRSLGFYLYNDTYPYPYFLDNGEVTFIDFRLMSSNELTSYEYKKIVNLLHKNIYNLY >gi|343387041|ref|AEM22531.1| glycoside hydrolase, family 3 domain protein, 2192891..2195266 [Brachyspira intermedia PWS/A] MNDNKYSQKIKELMKEMTLEEKVSLLSGKDFWSTKAIDRLKIDSVYLTDGPHGVRKQSTESDELSLQKSISSTCFPTACCSACSFDPNIMYEMGEAISREAKANKVSVVLGPGVNIKRSPLCGRNFEYFSEDPYLAGKMASGWINGLEDNGIQSSLKHFAANNQETLRLIIDSVVDERALREIYLYAFEIAVKEAKPSTVMCAYNSVNGTFASENKYLLTDILRDEWGFDGIVVSDWGAVNDRVEALKAGLDLQMPSTNGEDDKKVYNAVKETIIDEKILDKAVERLLYFSLYSMDNIYDNFDYDKEEHHNIARKIAENSIVLLKNEDKILPAKKESKIAVIGEFAQKPRYQGNGSSLINAYKIDTAEEYFKENNIEFNYAKGYDSNSPDIDNALIEEAVNISKDKDIVIIFAGLINSYESEGFDRKHLNLPENHNHLIEEISKVNKNVVVVLSIGAPVLMPWIDKVKGVLNLYLAGEAAVSAAFNIIFGIVNPSGKLAESFPLSLEDNPSYKYFPGGNKAVEYRESIFVGYRYYDKAQKNVLFPFGFGLSYTTFEFSNLIVSDANTIAGLDNIHVVFDIKNTGDVFGCEVAQVYISAPENNVFKPQKELKSFIKVFLEPGETKTVILKLNKRSFSFYNADTKQYEIESGIYTIYIGNSSRNLLLSKTMEINSINYYQKRIDNYFNFKDINISDNEFQQLLGRKLKPINIKASKPYHLNNNLADLLDNNIAKEFYNKLLSGLNDMFKDDKTDTKKMFESMMLETPLRSLHTMSGGIISREDVENLINTLNK >gi|343387042|ref|AEM22532.1| probable periplasmic protein, complement(2195350..2195778) [Brachyspira intermedia PWS/A] MKKLSIFLVSLFILSASSLFADMVVPPSALPKQATAFINRVFPGVQIWKVERDGAKFDVNLSNGVSIDFLGNGDWENIDSEYAPIPDAAFPPAVLQAVKKAYPQAAIIDAEKEWGNYKLKLNNMMEVMVSGNGQIMGQQFDD >gi|343387043|ref|AEM22533.1| glucose-1-phosphate adenylyltransferase, complement(2195964..2197250) [Brachyspira intermedia PWS/A] MRAFNTVALILGGGRGTRLYPLVKARSKPAVSLGGQYRMIDIPVSNCINSGFRNIYVITQFNSASLNNHIYNAYRFDNFSGGHVSILAAEQTDTNIDWYQGTADAVRKNLAHFDNEFVNNVVILSGDQVYRMNYNVMLQHMLETGADIVVGTVPVVREDAKGFGVMLVNKRGQITNFMEKPKEAEELDSLKLSEDQKKMFNIEDPEKEYLASMGIYVFRRNVLKEILSDVSMMDFGKDIIPEAIKKYKVFSYAFQGYWEDVGTIKAYFEANISFGSKNPPFDFYDENAPIYTHVRYLSPSKVEKATVTSSIIADGCRIENATIKECVIGVRSVVQSGSTLERVVMMGSDYYEDSDDIERLNVKHIPKIGIGKKCTLKNVIIDKNVRIGNDVVITNKKKIQHQDSEFYCIRDGIVIIPKNTIVKSGTII >gi|343387044|ref|AEM22534.1| Hydrolase 3, haloacid dehalogenase-like hydrolase, complement(2197345..2198130) [Brachyspira intermedia PWS/A] MIKAVFFDIDGTLVSFNTHKVSDSSKEAIRLLKEKGIKVFIATGRIKNHINNVDGIEFDGYITANGFDCYIGDKSIYRHGIAKEEVYSLMDYLKNKEQFPCSVMMNSGIYINYVTDKVKRVSESINLPIPAVDNYYDFLEENINDILQINLFVDAKKEKELMSKIFKNCESSRWHPDFTDVNTKGGGKHIGIDKIIEYYGIDLSETMAFGDGGNDITMIKHASIGVAMGNANEEVKEVADYITDDVDNDGVYNALKHFNVL >gi|343387045|ref|AEM22535.1| Hydrolase 3, haloacid dehalogenase-like hydrolase, complement(2198153..2198941) [Brachyspira intermedia PWS/A] MIKAVFFDIDGTLVSFNTHKISDSSKEAIRILKEKGIKVFIATGRIKMHINNVDNIEFDGYITANGFDCYIGDKSIYRHSIAKEEIYSLIDYLKNKEQFPCSVMMAKGVFINYITDEVAKYLESINLKINVAENYYDFLLENIDDILQINLFVNEEKERELMSKIFKNCESSRWHPALTDVNTKGGGKHIGIDKIIEYYGIDLSETMVFGDGGNDASMIKHAAIGVAMGNANESVKKIADYITDDVDNDGIYNALKHFNILD >gi|343387046|ref|AEM22536.1| Hydrolase 3, haloacid dehalogenase-like hydrolase, complement(2198965..2199762) [Brachyspira intermedia PWS/A] MIKAVFFDIDGTLVSFNTHKISDSSKEAIKILKDKGIKVFIASGRALFQIDNLDGLYFDGYITINGGSCLVKDNGNYKEIYRVSLDKDDLFALVDYLNKDKFPCTVITSDNLFINYTDDIIAHLYSMANVKVPESRDFNDYVPNNYDKILQLNIFVDENKEKYLMDNVLKNSKSSRWHFSFADVNSKYSGKDIGIDKIIEYYGIDLSETMAFGDGGNDIGMIKHAAIGVAMGNANENVKKIADYITDDVDNDGVYKALKHFNILD >gi|343387047|ref|AEM22537.1| intracellular protease, complement(2199879..2200403) [Brachyspira intermedia PWS/A] MGKTNKILYVMSGQNFQDEEYFESKKIFDNAGYKTEVSSTFIGTAQGKLGGMTNIDLLFSEVDAIEFDAVIFIGGIGCITLWDDWRTQGLAKLFLDNQKIVAGIGSGIVIMANAKILDGINVTCLPADESHVRHGNANVLKDNVVVSGNIITANGPASSKEFANAIVGALSNIS >gi|343387048|ref|AEM22538.1| glycogen synthase, complement(2200440..2201933) [Brachyspira intermedia PWS/A] MSKMKVMIASSEATPFIKTGGLADVVGALPIYLKKLDVEACVVLPKYRDINFQDCYLENVLPTMGVWMGNGEEWCSVFKTVKDGIDFYFIEHHSFFSREGLYHDASFNDYQDNAWRFGFFSRAALQLCKDLQLNVDVVHANDWQTAAIPAYIKTWHWNDQIGHAASMLTIHNANYQGIYNATTTYDYLGLGWNNFSPDTFEDHGNINFLKGGIFFSDVVTTVSPTYAREIASPYGGHGMAPYLQNKTTSFFGILNGIDEEVWSPEKDKFIPANYSADKMEGKKVCKRELQKRFLLEEDDDVVLIGAIGRFVDQKGYHFISSIIDSLVNNMKVQFCILGTGDKGLESFFGDIPKRYPGRVGSYIGYSNELSHLIEAGCDLFVMPSLFEPCGLNQMYSLRYGTLPIVHATGGLEDTVENYNEQTGEGTGFKFYDSTPSALYNTIGWAVSVYYDHRDRFTAMQKRAMKIDNSWEKSAKEYVKAYELAILNKNNYDRNCGL >gi|343387049|ref|AEM22539.1| transcription elongation factor GreA, complement(2202102..2202566) [Brachyspira intermedia PWS/A] MAKPITKEGYDKAKARLSELKAEFETLPAIIAEAREKGDLKENAEYHAAKERQGLLNAQISKLESDLAGCEIIDPANLDKDTVTFGKRVKVKDKTRNAVFEYRIVGELEADMTKNEITIVTPIAKGLLGKKIGDVVTIKVPAGDKVLEILEISI >gi|343387050|ref|AEM22540.1| beta-fructosidase (levanase/invertase), complement(2202636..2204138) [Brachyspira intermedia PWS/A] MQLIRGNEMRLVSKVFEEAIKQKEIEYSKDNNNKWRLNFHLMPPVGWLNDPNALSYFKGEYHIFFQYSPFDVEGGLKFWGHYITKDLINHKYVGVSIYPDEKYDCHGVYSGSALTEDDKLYIYYTGNVKLLGKHDYIESGREANTMLIISEDGINFSKKECLMEMKDYPKDITNHIRDPKVWKENDSYYMVQGARKYGKDRDNDIGEVLIFKSEDKRNWKHTSTINSKNRFGYMWECPDLFNLDGQNILITCPQGVEQIENVYENIYLSGYFLINDDYENKEHIEVNNFTVIDRGFDFYAPQTFLDENGNRVIIGWMGVPDTEDDHKNLTVQYGWQHCLTVARELSFKNGKLYQKPHRSLEKLREKKIFEKSCSYDLLSDNLISKDINSYEVLIDNIKSSDNFELLISEGVSIKYKNNRFILEFINDIGKKIGGGRYKRSCDLEKLESLRILIDTSAIEIFVNDGEIVFSTRYYPDEYSFKIIGNMNLTIYKLSNFNINH >gi|343387051|ref|AEM22541.1| PTS system, IIabc component, complement(2204248..2205669) [Brachyspira intermedia PWS/A] MAINYKKTAEEIIRVVNKDNIISATFCATRLRLIVKNRESIKDSDVQKIEGVKGVFFNSDQYQIILGTGVVNKVYAEVVNLGVTGAAKQNTEETKKVGEKNNFRKFIRIFADVFVPIMPAMIATGLFLGLKGALINDSFLGLFNLQVSNIPVSVMTFMSVLTETTFAFLPALVCWSTFRVFGGSPILGILLGLMLVSPALPNAYLVANPDSGVKPIMLFGFIPIVGYQGSILPALIAGIIGSKVELNLRKVIPNIIDILATPFLTLLIMLILSLAVIGPIFHIVEQWILIAINFSLSLPFGIGGFIIGFGIIFIVVTGVHHIMNLIEISLLAATTFNPINPLLSVANLAAGAACLAVTLKTRRKSVKAMGYGATLSAWLGITEPAIFGINIRYGIKPMVCGAIAAGITGLIARLLNLQATANGVTGIPGALLYIYDGKQLVGYIAVALVTVLLSFTITWFFGVPDEYMQEDEE >gi|343387052|ref|AEM22542.1| sucrose operon repressor, 2205835..2206800 [Brachyspira intermedia PWS/A] MATNKKITMKEIAEIAGVTKTTISRYFNGGYLKEETKKRIMEIISEYDYEPNTFARLKAKKSHIIGIIVPALDSIVGARVLTGLEKTLREKHYMPIIMNTNHQHKLELQYIEKLKRLNVDGIVLSATYITEDHKNILKKLDIPIVIYGQECSEGISIVNDDYNAGVDIGEYIGSKNHKNIGFITVDENDIAVGITRKNGVLDGLSNYGIENIKIEIADFSYEKAKIATEKLLKNKNIDAIICSTDRQALGVYKVLKEMGLKIPDDVSVISFGGYDIDEIIEPGLSTIKFDSFNAGVCTANTLIDLINNIKVKKYCMLIMNS >gi|343387053|ref|AEM22543.1| dihydropyrimidinase, complement(2206890..2208329) [Brachyspira intermedia PWS/A] MKKIIIKNGTIVNASETYKADVLIEDEKISQIGADLKCEGAEIIDASGKYVMPGGIDVHTHMDIDVGIGRAVDDFYTGTIAAACGGTTTIVDHMGFGPKDCNVFHQLKHYHSLADNKAVIDYSFHGVLQHVDEDVLKGLELLAKEEGLQSTKLYLTYNYKIEDDNVVRVLKKMKEINGVSAFHAENHYVVEYLKKKFVEEGKTSAHYHPISRPAEAEAEAVNRIIHLSVVAGNAPVYIVHTSASKSVDEIVNARALGHKNIFSETCPQYLVLTDKEYDREDGLKFVMSPPLRKQEDCDRLWKAIADGHIQVIATDHCPFNYETDKVKGKDNFTKCPNGAGGVEERYPLMFSEGVMKGRISINKFVETLCYNPALIYGLYPQKGAIIPNADADITIIDPNKKSVITKSNMHGACDYTAYEGMELLCSVDTVISRGKIVCKDNKFLGNKGDGKFIKRKSLDHYADFNKHFKLGDYIDIDCN >gi|343387054|ref|AEM22544.1| hypothetical protein, complement(2208458..2209387) [Brachyspira intermedia PWS/A] MKEINRLNDLFVRYLIGTEGDEDILENIVNAVLNDAGFESVSNLEIINPYNLPENENLKESILDVKAKTKDGKKILIEIQLIGNNNFIKRILYYIAKNIASELKENENYINISQMISISFLNFNLNIGSETDIKKEHKCLQLSDINNPSLKLDDFQIHFIEIKRFAEILKNASIDDYNKNKLLSWIDFFTTKDLEKDINKLIGGNHIMSKVIDKYKRFVADEKEMSAYNERDTFLYGQAAMLQYERAEGKKEGMEIGFKQGIEKGIEKGIEKGYKESQINIAKEMKKENMNIDVISRITGLSIEEIKDL >gi|343387055|ref|AEM22545.1| ankyrin repeat-containing protein, 2209564..2211921 [Brachyspira intermedia PWS/A] MKNIISIISIFVLIACSCGNSGNTKQTENTQTNQTQTNEQVYINPTTTNTNEYVQGIKMYPMYSQTLGGSLFLAVKYNNIEEVKSYLDKGANPNAQDEYGFTALMYATLIDIAKLLIEEGTDVNIKDNAGATSLMYAARDTNYEMVEFLLKNGADVNIRDTSGKTALYYSIQHDSFGQENAIKILNLLIKYGADVNTKDNDGASLLDVSYRISESFDKNKEMFKILVENGFDLESRIKTGRSDYDYTPLMIAALRNDYDMVKYLLDKGANPNTVNNENKTALTIANDYGKFDISKLLIQQGANINTQDEEGCTALMNATMIGDYEMVKFLLENGANINTKDNDGNTVLYYNIRYDHYEKEEKLENAKKIFNLLIKYGADINTKNNYGASLLDTAYTTELALNREMFKVLVENGFDLESRIKGGEYYSPADYDYTPLMIAALRNDYDMVKFLVEKGADVNAKTHSEHSSVETPLLLSLDNEHPDYRYYYYKNENSSAAEFLINNGADINVTNEDGETPLMYASKLHNIKVAELLIQKGADINVINEDGKTPLMYASKLHNIKVVELLIQKGADINAFDDYGNTALMYGVNNLETVKLLVENGADVNFYKGGSTALILACKPSLEINIDVIKYLVSKNADINAQDNEGYTALNKTLTTMPDFEIAHFLIEQGADVNIKNKNQYTPLIHLGMLEGSFYNISFQENRIKLAEVLLEKGADINAQDYNGYTSLMWACTRKSNESFVKFLVEKGADVNIEDDDGDTALDMAENLKLREIADILKKAQRNVK >gi|343387056|ref|AEM22546.1| Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, complement(2212287..2213114) [Brachyspira intermedia PWS/A] MSLFNDELVIVRGAGDLATGIVYSLYKAHFKVIVLETQYPSSIRRRVALSEAVYDGESKVEDIESVLVKSYEEALNIIANKNYKKIPILIDPNCDILKNIKPTFLIDAIIAKKNLGTNKSMAKYTIALGPGFTAGKDCDIVIETMRGHNLGRMYLEGEAIPNTGIPGNIGGKEAERVIHASSDGIIENVKNIGDFVKEKEVIAYINNNNEKIEVLATFDGLLRGIIKDGFKVHKGLKIADIDPRKSEYDNCFTISDKARNLGGSVLTAMMYLYNR >gi|343387057|ref|AEM22547.1| aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL s, complement(2213130..2215700) [Brachyspira intermedia PWS/A] MGEIAKIIINGKEMSFDSDRKLMDVLRNDCKCKSVKDGCSEGACGTCTVLIDGKPTKACIQTIGRLQGKSVQTIEGFTQREKDIYAHAFAVAGAVQCGFCIPGMVICAKGLIDKNPNPTRLEIVAAIKNNICRCTGYKKIIDAIELAAKMIRENIDVKEYKGKVKLGDRNIARVDAKEKALGIGEYCDDIELEGMLHGVAVRTKYPRAKILKIDISEAKALKGVVDVITAKDLPGAKKIGHIFHDWDVLIGEGETTRFIADGLALIVAEDEATAKKARDLVKIEYEELPLVRNPQEAMKEGAPLVHEERESNLLTHERLVKGNADEVIAKSKYKVTKHYELPWTEHAFMEAEVAVAMPFNEDGIFVYSSDQSVYDTKKEVALALGIDAEKVVVENKYVGGGFGGKEDMSVQHYAAIMAYRTKRPVKFKLTRQESINWHPKRHPMSIDMTTACDENGILTAMKATLITDAGAYASLSGPVLQRACTHAAGPYNYQVIDIEGKSFYTNNPPTGPFRGFGVPQSCFATEMNINLLAEMCGLDPWEIRYRNAIRPGQVLPNYQIADEATGLVETLEAVKDIYYNNKNVGIACSLKNSGVGVGLPDTGRVRLVVKDGKVNVYSAASCIGQGIATVLYQIAGETLDLNDDEIIIHQPNTATSPDSGTTSGSRQTLITGEACKRACEDLKKDLAGKTLKDLEGKEYYGEWLTITDKMGVDKPHPVSHVAYSYATQVCILNDDGTINKIVAAHDIGKAINPIALEGQIEGGVVMSLGYALTEKFPLEDCVPKVKFGTLGLFRADKTPDVESIIIEKPGVPYGYGATGIGEISSIPTAPAVALAYYKFNGEFQTELPLKNTPYSR >gi|343387058|ref|AEM22548.1| oxidoreductase, Fe-S subunit, complement(2215797..2218766) [Brachyspira intermedia PWS/A] MSDVMTPIPFGNLMNWILEEKKSGKVFGVSRAFKADKAKYYEIFGRKLETPIGPAAGPHTQLAQNIVAAYYTGSRFFELKTVQKMDGEELSKCVAKPCITANDECYNCEWSTELYVPQAFDEYVKAWVALKVIAKEWDLGDMDGFQFNMSVGYDYEGIKTEKIDTFIEGMKDASNTPIFKECKQWLTDNISRFQNFKKEDIDKINADVCNSVTLSTLHGCPPTEIEKIASYLITEKKLNTFVKCNPTLLGYEYARKTLDEMGYDYISFTDFHFNDDLQYSDAIPMLQRLQKLAEDNSLAFGVKITNTFPVDVKQKELPSEEMYMSGKSLFPLSMTVASRLSKDFDGKLRISYSGGCDYFNINDVIDAGIWPVTMATTFLKSGGYQRGEQIAKNLKEPKAFTKVDVAKTEKIIEWSKKSKHHIKPVKPLASRKVNKKVPLIDCYIAPCMETCPIHQDLTTYIRLNSEGKYEESFKVIIEKNALPFATGILCPHTCMDKCTRQFYEEPVSIRACKLEAAKAGYSKVIGTLKPAASIGKKAGIIGAGPAGLSAAFFLARAGVDVTVFDKREKAGGVVANIIPSFRISAEEIGNDVSLCKQMGVKFELGKEIKDIKEFAKNYDYTVVCIGAHKNMPLKLEAGESMNALKFLEEFNKTNGNVALGEDVVVIGGGNTAMDAARAAKKNKGVKNVRLVYRRTKRYMPALEEELQEALEDGVEFMELLAPVKLENGKLLCKKMELSDYDEKGRRNVVETGETVEVPASSVIASIGEQIESDFYKSNGIDVDDKGKPKCSAANESSIKNVYVAGDGLYGAATIVEAIRDAKVVAEAILGKAVAPDLPSVSTEEISYSKKGNLKEVSKDPEATRCLSCDYICESCTEVCPNRANVSIKVAGHAKISQIIHVDYMCNECGNCETFCPYSSAPYKDKFTLFATEDDMKNSKNDGFLFLDKEGNAKLRIDGKEESYKVGGKNNGVYTIVDAVFNNYKYLILK >gi|343387059|ref|AEM22549.1| chlorohydrolase/aminohydrolase, complement(2218864..2220195) [Brachyspira intermedia PWS/A] MLLIGGGKLITRDPAKPFIEDGAVLCDGRLIKEVGKTSDLKAKYKDAEYIDAKGSIIMPAFINVHEHIYSAMARGFSINGYNPKGFLEILDGMWWTIDRNLTLEQTKQSAMATYIESIKSGVTTVFDHHASFGHIEGSLFAIEEAAKTMGVRSCLCYEVSDRDGEAKSKASVKENLDFIKHAMADKTDMIKGMMGMHASFTISDKTMEACMKDLPEGIGCHIHVAEGIEDLHACLKEHGKRIVDRLYDFKVLGPKTILVHCIYINPHEMDLIKETDTMTSHNPESNMGNACGCPPTMELMKKGILTGLGTDGYTHDMTESYKVANVLHKHSLCDPNAAWGEIPTMLFENNAKMANRYFDTPLGVLKEGAAADVIIVDYKNYTELSDKNINGHILFGMNGGHVNTTVCNGEVLMRDRKLTKIDEEAAYAKIREEADKLWKQINK >gi|343387060|ref|AEM22550.1| hypothetical protein containing PAS domain, 2220376..2221029 [Brachyspira intermedia PWS/A] MSSNIILETLISVAHGIARQFGNNCEVCLHELKEDDLEHTIIFIINGGITGRQAGEGASNIVINTIEKLRKGEPIVDHLSYLTKASNGKILKSSTVFIKDMNGKYRYILSINFDITNFLPFKSDLDTLLQTEDKSKLEEIPNSAQELMEKLIIKSEELVGKPASIMNKDEKIKAIKFLNDSGVFLITKSGDKVSNHFGISKFTLYNYIDSKKEDINE >gi|343387061|ref|AEM22551.1| diaminopropionate ammonia-lyase, 2221022..2222215 [Brachyspira intermedia PWS/A] MSDLKWAENKMPKTEDKNLPIMSIEEVKKAKAFHQSFPQYTETPLADLKEMAKYLGLGTIKVKDESYRFGLNAFKVLGGSYSMARYIAQKMGKDVSEFPYDVLTSKKLKDEFGQATFFSATDGNHGRGVAWAANKLGQKSVIFMPKGSTETRLKNIQAEGATATIEEFNYDECVRKAAAEAAKVQNGVVVQDTAWEGYEEIPAWIMQGYGTMALEADEQFGERPTHVFVQAGVGSLAGAMVGYFSNKYKDNPPVMVVVEADAAACLYKGAEAGDGKIRIVEGDLDTIMAGLACGEPNITSWDILKNHADCFIAAQDIVAARGMRMLSAPLKGDPQVVSGESGAAPFGALATIMLNDEYAELRKKLKLDSNSKVLLFSTEGDTDPERWKNIIWEAKER >gi|343387062|ref|AEM22552.1| acetylornithine deacetylase ArgE, 2222274..2223605 [Brachyspira intermedia PWS/A] MSAISKEQFEQIKAKAEGYKADMTKFLRDLIRIPSESCEEKGVIERIAEEMKKVGFDKVDIDPMGNVLGYMGTGKTLIGIDAHIDTVGIGNKDNWNFDPYEGYENDVEIGGRGTSDQEGGIVSGVYGAKIMKDLGLLNDKYQVVVVGTVQEEDCDGLCWEYICKESKIKPEFVISTEPTDGGIYRGQRGRMEIRVDVKGISCHGSAPERGDNAIYKMADILQDIRSLNENDAKDSTEIKGLVKMLEEKYNPQYKEANFLGRGTVTVSQIFYTSPSRCAVADSCSISLDRRMTAGETWESCLEEIRNLPNVKKYGAEVSMYNYDRPSWTNLVYPIECYFPTWVIPEDHVVTKTLEEAYKGLFGTERVGPTPEIDKERKARPLTDKWTFSTNGVSIMGRNGIPCIGFGPGAEAQAHAPNEKTWKQDLVNCAALYAAVPTIYCENK >gi|343387063|ref|AEM22553.1| ornithine carbamoyltransferase, 2223707..2224846 [Brachyspira intermedia PWS/A] MYQNDFFLTWDKTFDELQAVWTVADALRFLRESNISTKVFDSGLGISLFRDNSTRTRFSFASACNLLGLEVQDLDEGKSQIAHGETVRETANMVSFMADVIGIRDDMYIGKGHEYMKEVSESVKQGYNDGILEQRPTLVNLQCDRDHPTQMMADSLHFIHELGGLENLRGKKVAMTWAYSPSYGKPLSVPQGAAGLFTRLGMDVALAYPKGYELMPEVEAIAKKNAEAAGVKLTITNNMDEAFEDADVVYPKSWAPFAAMQERTDLYGKGDTDGIKALEKRLLEQNANYKDWCCTEEKMKKTKDGKALYLHCLPADINDVSCKDGEVEASVFDRYRVPLYKQASYKPYVIAAMIFLSKFRDPQAVLSKLASDKKQRIFG >gi|343387064|ref|AEM22554.1| carbamate kinase, 2224976..2225917 [Brachyspira intermedia PWS/A] MENKKRIVIALGGNALGDTLAEQMEAVKITAKNIVDLVESGCEVIVAHGNGPQVGFINNAMNEYTNNHNTGNPIPLSVCVAMSQAYIGYDLQNAIMEEFSNRKITVPPIATLITQVVVDENDPAFKNPTKPIGQFMTKEEGEAKAKELGWIVKEDAGRGYRRVVASPKPVAIAESTAINAMLNEKALVICCGGGGIPVIRIGNHLKGMAAVIDKDFAASVLAKELNADMLIILTAVEKVAVNFGKPDVKWLDSMTIAEAKKHCDDGQFAPGSMLPKVQACMQFVEATGKEAMITLLEKAKDAINGKTGTRVVK >gi|343387065|ref|AEM22555.1| aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL s, 2226075..2228210 [Brachyspira intermedia PWS/A] METLIKELKNSVARVDALDKITGKTKYLNDIDFGKEVLHAKIVHSTKARAKILKINIPELPEGYSIIDYRDVPGKNAATMIISDWRPFADDNVRYIGETILLIVGPDKNVVYDIAEKVTIEYEDLEPVLNIEDSKKLLGGPIYGDDNIFISFKAGYGDVDEAFKKAKTIIEETYHTPYQEHLYMEVNGTVGVWENDGVTLYSSTQCPYYVQKAVAPVLGVEDSKVRVISPTIGGGFGGKEHYPDILSAAVAVAVHKLKKTVKLILDRQFDLAYSVKRQPAQITTKIALDENNNIIALDVVSDMDAGAYESSSRVIMQRCTYTAANVYHFPNVRVLGRLYCTNNVPSCAFRGFGGPQAIFAIERTMDNVANKINVDPIELKRKYFVKQNDPTITGGIFHDNIILPKMLDLALKESDYENKVKKYKDDMYKGIGISCFLHGCAFTGSGERDIIKAKLKLKKKGNKVTILTSNTEIGQGLHTTFRKIAAYNLNIPLENIDISVYDTNLIPNTGPTVASRSVMIVGYLIQEACKKLKDRWNESEEIEITEDYKHPSHLVDWDSTNLRGDAYPTYGLGINVVEVEIDKFTLEVKIVGVWAVFDCGYAIDEKIVEGQIKGGVAQALGWGALENIVNKDGRFLQVKMSDYMIPTSLDLPEIKTYIMGEPYQYGPSGAKGIGEITFDGAASAYASAMENALKHHFTKIPILPENIAEVI >gi|343387066|ref|AEM22556.1| aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS s, 2228210..2228698 [Brachyspira intermedia PWS/A] MPIKFKVNGNEVNTELDPLTRLIDFIRDELKLTGTKEGCGEGECGACAVLMDGKVVNSCLIPIILCEGKEIITIEGYSETERGKIVTKAFVDEGAVQCGFCTPGMIMSSEAILNDTKGKPTEYEVRKGLSGNLCRCTGYDHIVSAVLRASDIAFKEGKNLWQ >gi|343387067|ref|AEM22557.1| aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM s, 2228689..2229228 [Brachyspira intermedia PWS/A] MAVTLKAKNINEALDFRASNDSVIFAGGTDLMVEHLRGSNLIAKFDKPILFINDIDELKGIKEDENNIIIGALTTFDEIIKSDLTPQVLKDSASGIAGPPIRNIATIGGNICNASPSADSLPSLYAMDAVLVLKSKNSQREVKIKDFITGVSKTILKNDEILTHIIIPKKIINILFIEK >gi|343387068|ref|AEM22558.1| Xanthine/uracil permease, 2229656..2230942 [Brachyspira intermedia PWS/A] MIVGCVTPALIVSSAAGLKSGSPEQILLVQSSLVFAAISTIIMLFPIPITKNYHIGARLPMIMGVSFAYVSTMQSIARGPEGTGLGVRGIAIILGAQIIGGVVAIIFGFAVDKIRKLFPPLIAGTVVFTVGLSLYPTAVRYMAGGSTLYKINGEVVPFGSWQYWAVAGITLVAVIFFNQFTKGFLKLASVLFGLIVGYIAAFFFGMINFTSVANAGIFQAPKLIPFGIEFDPSAAIAISLLFAVNSVQAIGDFSATTSGSPIGRMPTDQELKCGITAYGLTNILCSVFGCLPTATYSQNVGIVVTTKVINRIVLGIAAIIILIAGLFPKFSALLTTIPSCVLGGATIMVFASIAMTGIKLVFTENMGPRNTLIVGLAVALGMGTVQVGGALDTFPAWAKTVFGSSPVVIATCVAIILNVILPKEEAKK >gi|343387069|ref|AEM22559.1| MobA-related protein, complement(2231049..2232233) [Brachyspira intermedia PWS/A] MSEIIIVCGAGGKTSYIKKIAENNKDKKIVITTTTKIFKPENYTETINNHSFDNDNIIVLGKEYDEKKLMYAGDEQLENAIKYADIVLIEADGAKYHSLKIPNDEEPAIPSFLYGRISKIVVIMGFHSLGRKFKEVCFRYNLCYEIDPERIVDLDTINYIVDKYYINKLKYKCSNIKLYLNDFTENNYIDYKKTAFIILASGKSERFNGNKLIHKFKSLNNKTLFEKTIDKISDVRKLFKEDKKLKNIETDVIVVSVYDDIINKKFENKDYYAFYNDRHNEGISASIKLGINEALKLKSDSFAFFVCDMPFLESNDIFNMLKYFYYSHKNIGAMFTDNRPSNPAIFSSKYVNDILSLENDFGAIRIIKKNIEDCFFYTIDENKLKDIDTREDLF >gi|343387070|ref|AEM22560.1| cation transport protein TrkH, complement(2232236..2233993) [Brachyspira intermedia PWS/A] MKNIFNNKVNNQNNPNKTFIQAIDEFLRRISNLIAIAGSIFAIFVLLMQVRQISIYNFYIYNYDKIINIITICFVFILIDQIRIAPRKLYIVVPIIQLVGLLLLNFFSRKYYDVYANRIIWTIAGSILFFLVIVINWLRLSYSKFTLYQMIIASFIFVITLGSLLLYLPLSTVTGKLSFVDALFTATSAVCVTGLSVIDISKEFTLFGQIVLIALIQIGGLGIMSISAIVLLFSISKGSVQDRVRTLEMFNTQNKDIIQSTIKVIFLSTFLIELLGAVSLFTVMDTNAKLGTRIFSSIFHSISAFCNAGFSLYTDNLHQYSANVVVNVTIMLLITLGGIGYPVMLTVTRAIVNKIKGQRYVFDVQARIVIFTSIILILAGSAFIFFNEYSNSLKDLPLKEKILVSLFQSVSPRTAGFETIAYNSMSNVTIGVVIFLMFVGASPNSTGGGVKTTTLFVFMFSVITAIFNRPYIVVNGRKIKDDTVNKSVAIVTLAIAISVLASFIMFYIEKSNTMMPILFEAISAISTVGLSLGITPTVTVWSKLILIVLMFIGRVGYLTLFMSIGSINKGKYGIIDLPTGEVTIG >gi|343387071|ref|AEM22561.1| biotin synthase, complement(2234081..2235202) [Brachyspira intermedia PWS/A] MININKVKEIINRIEIEEKISREDALSLLSSFKYDNNINIKKLNDEEKEEVKKLKEYLRIKAREKADKIFGKYVFMRGLIEFTNYCKNDCIYCGIRKSNKNAERYRLDKEDILSCCKLGYEIGFRTFVLQGGEDPYYNLEIMSDIVESIKTKYPDCALTLSIGEKEEEYYKILKEKGANRFLLRHETSDNIHYSKLHPDDMSLENRKECLRTLKKLGYQTGTGIMVGSPYQTLENIADDFIFMQEIKPEMIGIGPFLPHKDTPFANEKKGELELTLILISVLRLIFPLSLIPATTALGTIKEGGREMGILYGANVVMPNLSPMNVRKKYLLYNDKIATGSESAEGVESLRKNILDIGYILTGERGDFDINRHI >gi|343387072|ref|AEM22562.1| GTP-binding protein, complement(2235227..2236420) [Brachyspira intermedia PWS/A] MKNMNDTPNSNRTHIAIFGRRNAGKSSIINAIANQNIAIVSDTAGTTTDPVKKAIEINGIGACTIVDTAGFDDEGELGALRIERTKKIMESSDIALLVFDASFKDNDYSLELKWKNKLETLEIPIIAVFNKIDLNTDYKNIEQNIKEIFNLETVSISASNNINIDSLIETIKLTIPKTEEISITGHIIKEDDIVMLVMPQDIQAPKGRLILPQVQTIRDILDNKSVIMASTFDKFENALKALSKAPKVIITDSQVFKEVEKLKPKESLLTSFSVLFARYKGDEEVYKKGADFIDNLTKESKILIAESCTHVPLEGDIGRVKIPNLLKKKFGFEFDIDYVAGNDFPDDLSKYDLIIHCGGCMGTRKHILNRIRICKEQNVPITNYGMTIAKINGVKYI >gi|343387073|ref|AEM22563.1| thiamine biosynthesis protein, complement(2236536..2237960) [Brachyspira intermedia PWS/A] MSSATLFKYDSKSRNANEFINDEEILKTISQVESGNYNIRNILDKAKEMKGLEPNEALALLLCDDKDAENEMFEIAKKIKLEIYGKRIVLFAPLYLSNYCINGCVYCPYHAKNKHIARKQLTQDEIRAEVIALQDMGHKRLALETGEDPDYASMEYLLESIKTIYSIKHKNGAIRRVNVNIAATTVENYKKLKDAGIGTYVLFQETYHKPTYEKVHTSGPKSNYEYHTEAMDRAMEGGIDDVGIGVLFGLYNYKYDFTAMLYHAKHLEDTFGCGPHTISVPRIRPADDVDVKSFPNAITDSLFKKIVAVLRIAVPYTGIIVSTRESQKSREEVLEVGVSQISGGSRTSVGGYVEEEEENSKQFEISDNRSLDDIIKWLADIDYLPSFCTACYREGRTGDRFMAFAKSGQIKNFCQANAIITLKEYENDYAKEETKKSIDKVIINEIEKVPNEKVKVKLVDSLKGIDAGRRDFKF >gi|343387074|ref|AEM22564.1| hypothetical protein, complement(2238004..2238255) [Brachyspira intermedia PWS/A] MENNRIAVVGIIVEKTENVSKVNEILHDYSDFIIGRMGIPYREENINIISIVLNAPNDKINSLTGKLGMLEGVSAKALYANKK >gi|343387075|ref|AEM22565.1| methyl-accepting chemotaxis protein McpA, complement(2238713..2240503) [Brachyspira intermedia PWS/A] MSIIMLGFLLSASVFFSNKGITQSTDTGFKNTVEGYANLFDSILDAQIMVNVAYSSSANIRNYLTDMSNSYRNNVDLDITSYIENNNFIENISIMNTNGVIVFDKNEKLIGRNFMDLRPDMMRKLLAGEELAFGNEIKQSAATGELTISLGIRILDYNNQLIGYLVSIIKIMVIYDNYFSNIKLGRTGRIVAVNDQLKVVMDTDPNEIAKDAPNEYDNIIKSGSVSGNISYVANNHVREGFYKKMKIHPWIVAYAMDEEEIYEINKSILVTSIIIGIISMVLMTLVVFLFTKSIIKPLNIIVEEAKEIEEGKLVINRKPLNRKDELGQLSHSFTSMRIKLIEVIETTLNNADKMSLAANNLAAGNKDLSRRSENTAANLEETASSMEEISSAISMATSNSVKGNEMMNHCRESIDNATSVVSETVRSMNEVNADSEKIKDIIKVIEGIAFQTNILALNAAVEAARAGDQGKGFAVVASEVRSLAQSSQDSAKDITELVNQVYEKINRANKIVESQEELFMSIKNEIDETANIIKDISSAALEQQSGVAQVNKAVTEMDSITQENAALVEESTASSLALYDDAKELQSVMSFFRIER >gi|343387076|ref|AEM22566.1| methyl-accepting chemotaxis protein McpA, complement(2241033..2242703) [Brachyspira intermedia PWS/A] MDALTEAQMLLANSYASDANIRNYMIFRDDVYSVYSGRDMTNFIEKNSYVESLYLTDINGNVLLTTSEALRNRNMADIRPDLWRKLSTGEKVAFGSPRESPVSGEITLGVGSIVTDFTNNTIGYLVSTIKGSVIHDNYFSKVRLGRTGRIVAVNENFIVTMDMDPANINKPAPEAYKNIFNNALDEGPYSYKNGNILRIGYYKKMDVQPWIVTYAMNEDEIFEQIRTTVFVSILVAVLSIIALVIFMFMYARRITKPLRIVVEEAKEIEEGRLVMHGRKVNRKDEIGELSRSFHNMKYKLIDIIETSLNESSRMAQAANSLATGNKDLAEKAESTAGNLEETGSFMEEIAAAITVSINNSVKGNEMMNDCKIAIENAASVVEETVRSISEVNADSEKIKNIIKVIEGIAFQTNILALNAAVEAARAGDQGKGFAVVASEVRSLAQSSQDSAKDITELINQVYEKINRANQIVGSQEQLFVGIKEQIEETADTIRSITEAAVEQKEGVAQVNKAVQEMDTLTQENAALVEESTASSMSLYDDARHLQEIINFFSIEK >gi|343387077|ref|AEM22567.1| tsr1 protein, complement(2243038..2244720) [Brachyspira intermedia PWS/A] MDNASLDISGWILEYKIQLKTVSSFFETDMTINDMMSAVYKMKSLDSELVDVYFGGDIPYANGGFFVTAIPDTIPSDYDQTTRDWYVNSINTNDVYVSEPYTDASTSSSVITLAIAVKNSSVVKGVAALDVYFSKIEEIMNKIKNDKGYEFFVILSDGRYLNHSNKDYLLNDRYSAFNMPEFSDVKNNMINGSAVSIYKDQWYGIKEIKGFPWYIVAKGNDKELKNNIYKLTFYLFLVIILSIGLEVVLVTVITIPITDTLNEAIHNIDNMALGNFDTKENDSKKHNNIAHALSSSIYDMQKNISSVIYNLKLDIDSINSEMEKISLGNNDLSDKTIDQASSINELASAIQFLSSSIADTYNNTNNAKEVSKKALECSIRGVEIVSKTSSNMEEISDASKQISEIIKMIQSIAFQTNILALNAAVEAARAGEQGKGFAVVASEVRNLAQTSSKAADDITSIVESTIQKINLGYETVAESSSLLNEINNLVTDVSNALVNISNAAEEEKDNIEQINVSVSSISNITQRNSLLANDSALSSKEILNKTGNIANNISYFRFKN >gi|343387078|ref|AEM22568.1| penicillin-binding protein 2, 2245101..2247689 [Brachyspira intermedia PWS/A] MEKIIRRIALTIIYTLLLSIIAVSIIFIPKGYNFYKYCKEYINKPFSENELNINEERALKIYDRNLILISTIFPKHGGFFEEVKYNDLSTNLINAVVSAEDKNFFNHNGIDYKAIIRAFLSNLISGRVVSGGSTITQQLAKNIIPRERTYINKFYEALDAIRLERNLTKEQIITEYLNRVFFGNNCYGVGAASDLYFHKKAKDLNINESAMLASIIKSGTKFNPYKYEERLKSRRIYVLGEMKNNNFITEENYNQYTNEKLKIFDDKEKYTFKAPHFTMYAKESLEQLKYTGVIELRTTLDYKMQKEAVLVISNSSQSLHTFNVRNISCVILNAKTGEVLSMIGSMDYFDAETHGAVNGATALRQAGSTLKPFMYAYLFDKGESPASVIADIKTHINSPGGDYIPENFDHKYRGPVTIRDALANSLNIPAVKWLARYSIKDFQNILLKSGLSSIDKNPDYYGYSLVLGSAEVRLVDLASAYTIFPNSGTFINNYSITSLKKANGEVITLPKKTTRKVISEESAYLITSILSDRNARMGSFRSYKGIVYPFSIAIKTGTSKGSRDAWAIGYTKDYIVGIWLGDFAGSEMINITGGNGAVPILYDLFTMLNKSQKETKWNKPDTIVKREICLISGKLRGEFCKETRMEEFSHINVPKEECDVHNLYIKTNYDGSISEKVFVNLPSEYNGWIREQQIERPTSEWTKVNNIYAYNRMKNTINNQNSGLETHTDSTTENINNAENTFVYDSAERPQMNLNAVPYASPERTINIKERLSIKEPTDNSVYKIDSTLPIEYQNIFISSYIPKNVVSANLYCNKEIIANIDDLKKQYIRWNLKHGDYIFYIEAKTEEGETIKSSPVKIYVQ >gi|343387079|ref|AEM22569.1| hypothetical protein, 2247768..2248523 [Brachyspira intermedia PWS/A] MLNKKIISILLMLSIAFSLQSAYKTNQYMKVVDVKGKVKISSQKAIVKPAQNGDLLFSKDNISTEANSSLTSYLESNNIFKVKGNSSLNIDESYDKAGNTKLHLNKGDFLIAASSNAKPDSIIISTSNANIKVSGVAAVTYNDGNTKAQFLYGDGEVNGTKVDQFMEANIDNSNKISIKNIELNQDLTNTINEIASMPYVETVVPEKIDINDIKNQVSTETNTVAEITSIDYVGNTNENRTTFVITNEIRK >gi|343387080|ref|AEM22570.1| hypothetical protein, 2248604..2249800 [Brachyspira intermedia PWS/A] MRKLSSKTTEFYKTFTHCIPSDKEIAKKEEEILENIINMSTKEVTAYIRQYIIKLTYYRKNFLDVETAELISKMLLEISFVLRIQYLDYLKNKENNTLNNDDYDINNLSKILQLLISEIAMIISVKEYETNNMFNNFDALKSDTTIGHSIRIFIMIIEAVNFFNKKLNQGAANKMRIDFKKTYYKYSEKIYQRYNLINEINTLDSNVKLGVRKIENNTISEIAIGVLMHDISLDKEKDYIPIPSEEKDNHSIKDYGFAKYFMRGNEGVALTVSLHHEYYSHGYGLFTELYKAVLRRNPNHKIEYIVSYDYKDILTLQSLTYLPAKMLEVIDIYDTLTKNMKKTPKEAILFMTENFLEKDIMLDPIMTDVFIEYLKEVKKSNYNKLKITFNSFLYTFFI >gi|343387081|ref|AEM22571.1| 1-deoxy-D-xylulose-5-phosphate synthase, complement(2249756..2251609) [Brachyspira intermedia PWS/A] MYLESINTPSDIKNLDIEQLKLLASEIREFLINNVSNTGGHLGSNLGVVDLTLVLHYLFDSPKDAFIFDVGHQSYTHKILTGRKDKFNTLRTYGGISGFPKRMESEHDIEETGHSSTSLSFAYGLACSKEILGLRGEVIAIIGDGAMTGGMALEAMNNIANTNTDIIIVLNNNEMSIGKNIGAISKFLNTTLNDSLVQEASEKVRDLVSTLPFGDIANEFIDRGKGAIRTFVAPGIAFREMGFKYFGPVDGHSFEDLISTFQKAKSIRGPRLVQVNTIKGKGYKIAEENPSKFHGIGPFDIETGELKNKSSSKTFSNLAGECIIKAAEENKNIVAITAAMESGTGLTEYAKLFKDRFFDVGIAEQHAITFAVGLSENGIIPFVCLYSTFLQRGYDQVIHDIGIMNANVKLMIDRAGLVPEDGDTHQGVFDVSFLRIIPNITIMAPVGEKDFRDMVQKSVEYRGPTVMRYNKSAVRELKANIVSDNFEIGKAHIIRESNKEKNLIISYGPTLIDIVDAVDEINFDCSIINLSTLKPLDEETILNMIRKADKILIIEESIKNGGIGSAILELMSDNEIYKNVKVHALPDKFFEVATRNELLKIYKLDKEGIKETIKSYF >gi|343387082|ref|AEM22572.1| aspartate carbamoyltransferase catalytic subunit, 2251940..2253019 [Brachyspira intermedia PWS/A] MRNFISIKELSKEEVIEVLDVAKELDNTDSRERRKLMDGMIMTSIFFEPSTRTRLSFTSAAYRLGCKELGFDNPDQSSIKKGESLRDTIIMVSAYSDIIVMRHSIDGAAKFAEEVTNCPIINAGDGANEHPSQTLLDLYTLREELGTIENKKLAFVGDTRYGRTVHSLVDGLMMFNGEFYFISPDVIQIPDYILKELDNANIKYKKLSNYEEVLKEIDCLYMTRVQKERFDDINEYEEVKHAFRISKDSIVGKCKDDMIILHPLPRVDEINIDLDDTKYAKYFIQARNGVPTRMAMMALATDAIKSKVKRKEMNYEVVENKEIVCPNNKCVTHFEETKNRVVKKGYGDFCYYCNREIGK >gi|343387083|ref|AEM22573.1| putative dihydroorotase, 2253036..2254268 [Brachyspira intermedia PWS/A] MIIKNAKIPNNEKIVSIIIENEKIKNIDYDNNFEKYISDNKTDDIIDANYNYVLSGIIDPHTHMRDPGLTHKEDFNSGSKACARGGVTVFLDMPNTVPNTISKENLISKKSMMIGKSYVDYGFHFGGSKADNSDDIKNIINDAASTKIFFNASTGNMLVEDDKILEKLFEVSKIVTVHAEDKMVDKAIKIAKNTNTPLYLCHLSLESEIDSLRKAKDSGMIIYGEATPHHLFLNTEDVNKNDRNKMLLRMKPELREKSDNKALWNAILDGTIDTIGTDHAPHLISEKLEKLTFGVPSVEHSLELMLKKVNDNTIDLKLLTKIMSEKSAEIFSMKDKGLLKENYDADLVIIDLNDHSEIEEKDIITKAGWSPYIGYQRGGKVLTTIVRGNIVYNNGKFTDNFIGKEITYSN >gi|343387084|ref|AEM22574.1| hypothetical protein, 2254397..2255440 [Brachyspira intermedia PWS/A] MRGIQMIKIKIFITILSSIIILSCSANNNTAETKLTDYSDKNNWLSIPSTSNEVDVFYLYSTTWTRANSNDSIVCPIDYEPMRSTITNSMLEQTGIFEEVGNVYAPFYRQADALYLMNTNNNISKEEQDKYFYSSPKEDAIAAFDYYIKNYNNGKPFILAGHSQGAMMIKEILIDYFKTNENLKNRMVAAYIFGYSVTQQDLDENPHLRFANGEYDTGVIISYNTEAPDFNGYNPVLLEGAISINPISWTLDETLATKEQSLGANISHNYGNPKANIVTNAGKPSKIADAKVDKARGVIRCSTINIDDFYVRGGGVFEKGVYHVYDIALYYYDLKENVRKRVGAFWK >gi|343387085|ref|AEM22575.1| hypothetical protein, complement(2255541..2256116) [Brachyspira intermedia PWS/A] MKKVLFLFAVLLAFSSCSKKEYNDGWFDIEKNYVDIPQKKYDYSSVGTKSANNSQNNNELKQDKIDTSTLDMNNVIEIKERMFINQCNDVYLNPDDYRGKLIKLQGIYDGFTDKETGEKLNFVFRYGPGCCGYDGVAGFEFDYKGNIPNPQDWIEVVGVVEILEIDNYETVRLNAISLNVLDKRGKEFVAN >gi|343387086|ref|AEM22576.1| ABC-type Mn/Zn transport system, complement(2256132..2256959) [Brachyspira intermedia PWS/A] MIALIQELFSYTFIVRAVIVGILVSLCAALLGVNLVLKRYSMIGIGLSNVGFGALSLSLMFGFSTLQLSIPIVAIASILLLRLSENSKIKGDAAIALISSVSLAVGIIAITVKTGINTDVCNYMFGSILAMSKSDVYISIAVSIVVIVLYVLFYNKIFLVTFDENFARAVGINAEFYNMLISILTSLIIVLGMRMMGAMLISSLIIFPALTSMRIFNTFKSVVISSAILSVFCFFIGIIVSFQLEYPTGACIVMVNLAMLLIFSIVGRFIKLGAK >gi|343387087|ref|AEM22577.1| ABC-type Mn/Zn transport system, complement(2256956..2257648) [Brachyspira intermedia PWS/A] MLNIKDLSVFYDSNEVLSNINFSLNKGDYLSIIGENGSGKTTLIKTILGLIKPKKGSISFNSIKKNEIGYLPQQGIVQKSFPASVFEVVISGRLNKKKFLPFYTSKDKKITLDNLKKLNIENLKNKSYKDLSGGQQQRVALARALCSTKELLILDEPSTGLDPIATADLYNLIKKLNDEVTIIMVSHDIANAVKYSNKILHINKNILFFGSTEDYTKTDIYRKISGEDMR >gi|343387088|ref|AEM22578.1| Metal binding protein, complement(2257648..2258661) [Brachyspira intermedia PWS/A] MQKKILIVLTLLFSIIISCNDANKSSKENNKEIDNSKLKVVTTIFPIYDFTRNIAGDNVNLQMIIKPGIEIHSFNTTPADVIDIQNADVFIYIGGESEAWAEKIISSMNTNSKKIIRLIDYVKALDEEIVEGMEHDIDHNYEEEANHEEHENHTEESHTHEGVYDEHIWTSPKNAQLMVTAICNALSEIDANNAGIYKTNADKYNQELTALDEEIRNAVNSSKRKNIVFGDRFPFRYLAEEYGLEYRAPFTGCSSQVDASPKTIAYLMNYIKDNKIPYLYYIELSNEKIANTLIEQTGAEKLKLHSGQNVSKDEFDSGVTYLSIMRDNLESLKKGLN >gi|343387089|ref|AEM22579.1| hypothetical protein, complement(2259113..2259721) [Brachyspira intermedia PWS/A] MKNIILSIFLCLFFVSCLDYTQYVTVDENKNVTVVAIVTVSKSLIELAAYSEGYEEGVPDYYYEDILRDMESEAKTSYPRNFKFKYINNDNEIGLYVNGVLKESDITEDDNSLLPVRNGNKFLFTPFKDSENTSEYKEYESMYSSMKMKLIVSKSYIPTVSSCYLSSYDDIKDVNVYDLRDAFLIEIPIFSGMNNPVLYIEL >gi|343387090|ref|AEM22580.1| Formiminotransferase-cyclodeaminase, 2259865..2260284 [Brachyspira intermedia PWS/A] MSKLIDKKLADYINDVDSSLPAPGGGSVMGAVGSLACALAGMVGHLTVNKKKFLELSQQEQDNFNKAIENIRNIKSRLMDIVDKDAESFNAFMEAMKLPKNTDEEKAKRKTAISDAAKKAIDIPFSALKSCYELMPFLK >gi|343387091|ref|AEM22581.1| hypothetical protein, 2260854..2261129 [Brachyspira intermedia PWS/A] MISLSEEEKEKIKEFIKKEGKSKRLISRANIILALDEKKNTGLTHTDIAKQYNVTYHTVVNIINEYVKSGLDETLTYKRNPNSNRKKKQAN >gi|343387092|ref|AEM22582.1| beta-hexosaminidase, complement(2261160..2262194) [Brachyspira intermedia PWS/A] MFLILLLFYACKSASSVMEEQSYIDELKQSYPDLSSYIDKVAEMSDKERKGLLLMVGIKDKVLSEETIKTLKDNHIMGVILFDYNITDEKQLKKLTSDLRKYVNPNMLISIDQEGGEVNRINFDKLKNISPKNIGDSNSAEYAYNIAYQKSKFLLDLGINMILGPLCDIPNDTNSYLYNRSFSTNVNIVAEMVSNTVKAQRDAGIISVLKHFPGHGDTAVNSHNDFPSINKTTNELLSNEFIPFKSGIDAGAEMVLVAHIKNKYIDNKNTASMSKKYADILEKDLGFNGVIITDDLAMTGNIDKGINFGINLISNVYENVEYMFEDIDADIISCARLLKIISEK >gi|343387093|ref|AEM22583.1| hypothetical protein, complement(2262209..2263159) [Brachyspira intermedia PWS/A] MLYIIIITIILLFVLVFLFITHFNNNEEKTYLNNIDNDKEILTFISVKNYDNELINIINTTKISGIIINIDNLDIDTLYNIIKTIKRSINRKIFIALDQDYKSTYNIAYHQKFKVYPSYIGERESEEYAYKIAYERALKLKSLGINMILSPICNTYCNEKSHLKENIFTNDKILASRLIYQTVKAQKDAGIITALKYFPKYYDDELYIDEKIDNVENVLDNRETFLAGIKANADIIVMSHIKNADKYKDFLINNMKFKGIIMTDYINDSKNIISYGINVFSYNYYRNKNIKNMIKNNIKEMDLEVCSKVLKLIERL >gi|343387094|ref|AEM22584.1| spore coat polysaccharide biosynthesis protein spsC, complement(2263166..2264377) [Brachyspira intermedia PWS/A] MNKKIPFSPPDITDSEINAVVNVLKSGWITTGTVNKEFEEELCKYIDVKRVKLFSSATSAMELALKIFGVGDGDEVIVPAYTYASTANVVVHLGAKVVFIDAKEDDFNIDLERLEKAITNKTKAVIAVDIGGKPCDYDAIIKILESKKELFNASENKYQKELKRPLFLLDAAHSIGAVYKGKRTGSQADMSSFSFHAVKNITTSEGGALSFNDIGNLNADDIYKELSILSLHGQNKSAFDKNKGGKGAWRYNIELPGYKCNMSDLHAAIGLSQLRRYDSMLNHRKKIVDIYNYILSKNKRIILPNFKDDHSESSYHLYLIRIQDFEEEDRDLFIDKMSELGITLNVHYLPLPAHKAYIDLGYKMDDYKNAFNLYKNQITLPLYSTLKEEDAEYIALNIIKYLN >gi|343387095|ref|AEM22585.1| transporter/membrane, 2264611..2265378 [Brachyspira intermedia PWS/A] MLSIENLIIIIIGCSIAGFVDAAAGGGGLISLPAYLIAGIPPHTALATNKFTSTSGAIVSAFTFFKNGKLTTKLIKFLIPMTILGSIVGVQVIVLIDAKILQPLIMILILAVGIYTLFSKTFGTENQFDENNLKTKNYIVGMFLAFLLGFYDAVFGPGTGSFLIMFFVLYYKMDFLLASGNAKALNLTSNLCSLIIFAIEGKVNYMAGVFVIPFIMTSTYFGAKFAIKKGIKVIKPIFVSISLLTTLKILLDIIR >gi|343387096|ref|AEM22586.1| conserved hypothetical protein, complement(2265836..2267074) [Brachyspira intermedia PWS/A] MNKEIIENILLTLINEFKKDEEEKYNAVSNTIYSIHKSFLYEEELKTNRLNEIFSKIKIIIEKVKNEMKKFPPQFCIFDVVNLQRHENYNSNLLAKFLKINIENEGTELSFVKDFLIYLNDKFKWGYYGLKNIEELEEINHLDIKIKREEYAGSRRIDLFISYKKDFAIIIENKIYAGEQDNQLDDYYQNKKKDNYKNLYMIFLTPSGYEPYTLSEKSKKELGNNFQTLKHSDIALWLENILENEKYSFLHDSNILFKDNDNKYIKDYRLLKSAIIQTIHNANMISNNTKELDMTKSKIQELLEANIFKDIQTVEDAEEYRKIFTSVIDIINQKQIHIIVKPHIEFTEKVLEYLKNNDKSKYYIFLTERKIINDIYQEGYSHNIKYSFCNGEVELILESSKDCFFFIFTCII >gi|343387097|ref|AEM22587.1| glycosyltransferase, 2267848..2268684 [Brachyspira intermedia PWS/A] MVSIIITTKNSENFIADCINAVKNSNYKDTEIILVDNSSTDRTVEIAKELGAKTFIKGPERSAQRNYGAEMSSGEIIGFLDVDMTISENVITECLEFFENNKDVQALYIPEKIYGNTFFNRVRNFERSFYDATVIDAVRFFRREAFIKIGGFDLNLNSAEDWDIDRRIKEIGKVDIIKSPLYHHENHTLKQYIIKKSYYASSFNNYFNKWGHDETTKKQFGMFYRYIGVYVEKGKWKKLLLHPIYSISMYFLRFLIGVVYILSKFNISKKENVYKDKK >gi|343387098|ref|AEM22588.1| hypothetical protein, 2268681..2269946 [Brachyspira intermedia PWS/A] MININNKKLLIILSVTAIIIGIFLRFYIYNKTILGNPPRLDEQYQFYQTKKHIKEKRLPIEGAFLNTPETYDSEEDSRVPGGYFYLTYMIKYLIGGQTYEGARLVNLITSILISIIFFVWLYKRFSLTTFTIILMLMSVNVYFLRAGNDIYNPHNPFILSFIFLPVLYEYLYNEKKFIYAVLLFPILALSAQCHFSNFFSIIPSLIVFLIIRWKKDTKKNIIPLSIGVFISFLTYLPYLIYQFKNNFESLSKILGRKSELAHYVIQPPQIYSIFLFTTNESGGKYTNGIKDIINAYFGSNPLYAFTFIFYILSLLFALTALIYTYKHFFTKKMVTDNDKKTNALKDLLFFYIVYIISTIVFYMVGGIAGGGRPHYFYSSFTLGFVPIIYFIENINYIKSKYINYICLYALLNMIAIFIYRI >gi|343387099|ref|AEM22589.1| hypothetical protein, complement(2269947..2270549) [Brachyspira intermedia PWS/A] MNNDINKIIEIANNNQKKAFDIVKELDIENAFKGIGARINLVGSLKMGLLMKNRDIDFHVYTPELNIEKSFLAISKIASNKKIQKITYTNLIETEEHCIEWHLFYKGNDKDDNENWQIDIIHILEGSYYDGYFEKVADDIMNMLTEEKRNIILKLKYETPNDIKIMGIEYYKAVLKYNITTFEEFMKWRDKHIFNGIIEF >gi|343387100|ref|AEM22590.1| hypothetical protein, complement(2270658..2271428) [Brachyspira intermedia PWS/A] MRKIILSIIMFIAIASTSFAVNGGFEFILNVPIGMSVGVYDYDLTDRAENLDVWLNGEIRNNVGRNSGVGFDIGVTAQLGYMFKFTDKLGLSVLGEVGYSHDTYSYISKLDKNISYTYSFESIQIGILPKFNFFNFSVGIGGGIKFPMAGNYHSKIGSISTDTKIDSDYMKRNFKTGVIPYIKFTFDYSIFFTEKMAFNIGLYLGYDFGVEPNLYFINTGLPNWNLGNNTLVVDEVSYSSFDIGIQLGFKFGPRTK >gi|343387101|ref|AEM22591.1| hypothetical protein, 2271781..2272518 [Brachyspira intermedia PWS/A] MEIIRDILINDNEDQSKYDLHNYFLNNKGEAIFKHLPFFDIYERHFSKYRGKDINMMEIGVGSGGAVKMWREYFRNNNPDANINIYAIDRNPKCKQFEQDNIKIFIGSQDDREFLKEVKSQIPKLDILIDDGGHRMNQQITTFEEMYEHVKDDGIYLCEDVYTSYWPNFGGGYKNPNSYIEYTKNLIDSLNAYWATEEDDLYPNAFTDSAYSIHYYDGIVIIEKRKRDTRYNDICQQAIIGKTKE >gi|343387102|ref|AEM22592.1| hypothetical protein, complement(2272579..2272914) [Brachyspira intermedia PWS/A] MSYMHKDSANGKWNTLSLAEQMANIGSEVYRAIKFKNKNNFEYSKNAAYRALELIDLTILAQYKKHSIKEFTRLREVLCDYLLGDNEYNTDESIMKYFDSFAYILAKRKGK >gi|343387103|ref|AEM22593.1| hypothetical protein, complement(2272926..2273267) [Brachyspira intermedia PWS/A] MIIIKESIEVSEIKNMLGNFFTDMVKGVVDIEKNELALDAELHSDLESLLIENGSLQKNLWGINIYPELDDEDFIEFDSLINIRPADNNRSRYVEDENIRNKIIEILNNLIIK >gi|343387104|ref|AEM22594.1| hypothetical protein, 2273363..2273527 [Brachyspira intermedia PWS/A] MNVFYNLYSDNKNSFYYCYKNNKNLNAIINANFKAINEQFKLTKEVVSLLKASL >gi|343387105|ref|AEM22595.1| flagellar hook-associated protein FlgL, 2273801..2275054 [Brachyspira intermedia PWS/A] MRVTEQAQFNRTVSTIKRNYNEMEASQTRLSTGQRVQYPHQNVTSTINSIYYRTRMSSVDRYQSNIVDGKEKLSVAHDSMSAITQALNRARDLAVQGANSTYGADDRAKMAMEVEEMIERIYDISKTQSKGEYIFSGTSIKTAPFRAFYGYDEKAGRSIVKSVMYEGDGNAQNREVENGQLINVATPGNYAFWGTDMEIISTTDASTYVAAEDQDIMIDDMVVNIKQGDNIEAIVQRINDANGNVSASIGDLRGGEKVIQLKTGSPHKILLQDLAGGTVLQDIGLVREGAANNLENNYEPSALVTGKSVFETLIYLRDAMLNDDVRAIGSEALGYIDSSLDNVATVQANASSKVTRLDMGYASFEDQKLAIEEALAKNENIDYAEEIVNFNMWQYAHNASLQTAGRLLGRTLMDYLR >gi|343387106|ref|AEM22596.1| flagellar assembly protein, 2275124..2275588 [Brachyspira intermedia PWS/A] MPEIESRILGKIEVSDDSLYHLNGTILAFEAYDEFYLVNMDEEGTFKILQSKDDKNVCFILIDPFLIFKNYEPDVHDDDIKYLGIENNEDLYLLTIVSIPNSDFKSMSANLVAPVVFNIKNHKAKQCTVSGDKYTTRHSILLEDNDSNTEERSS >gi|343387107|ref|AEM22597.1| carbon storage regulator, 2275591..2275839 [Brachyspira intermedia PWS/A] MLVLSRKINQSIVIGDNIEIMLVDIRGDQIKLGINAPKNVKIFRKEVYEEIESQNLEASKEATADKLNILSNFVKNKFGKKQ >gi|343387108|ref|AEM22598.1| hypothetical protein, complement(2275925..2276833) [Brachyspira intermedia PWS/A] MIKDFFYFIVIILSKTIIDLFRSFGSIIIFGFILYVLSSITRRIFAKTLGSKTEVYITGWIGTPIHELSHALFCLLFKHKINDIKLFNTKSDTIGYVLHSYDSRSWYQQMGNFFIGVGPIIIGTLIVYLLFILLAPELKNNVFEIPVIKYKQVFNSDILSIFYYTISNIFVYTYNIFINIIKNVIAYSSFKNITFWIFLYLSIAIASHMELSPADISHASKGIIVIFALSLILNTLFIIMKVFFKLDIPIFINQFFNRILETYNMLLIFSAIISLFNFLISYIILTPINLIKNRSLINPFTS >gi|343387109|ref|AEM22599.1| hypothetical protein, 2277043..2278128 [Brachyspira intermedia PWS/A] MKKIIFLMLLILNSFAFAIDDIVDKDNMHNLIEGVTSTRFGSDRVSTIYDFAPLMNHNTPFKLGVSILDLSHIVNNSYTNADGGRKLAFLPKGFVGLSYGIFGFGYQFNLYNELSEKKMPVAHSHSFSFGLATEKYRFTLPFSFSLGDEKYYGGKLSLSTTPKFSFMFRGGLLDEFTMSLHYGIQLSTVTNDVAGTQIAPMVLGGSVYGSIMLTRFDNYPVQISLPVKLAFYYGIGARWATIDAGYAEDALLNYLYDDEGGRSTDSMYFYVLLPAKFEAKLGAIYTYVMPRLMFEGKIYKVDGEYNLHYGVEGEVRVTLVENFTFGLTGYAEGQGIMKKSADFNIYNAFGGGIDVWGIWRY >gi|343387110|ref|AEM22600.1| hypothetical protein, 2278612..2278746 [Brachyspira intermedia PWS/A] MNEKRRYIMTKLFNILDNECTFINDEDYRVLISEYYEIIRKYEE >gi|343387111|ref|AEM22601.1| hypothetical protein, 2278936..2279067 [Brachyspira intermedia PWS/A] MKKGDLHMTKLLNTLNNDCILLDDEEYNLLISEYNDIIENVEE >gi|343387112|ref|AEM22602.1| molybdate metabolism regulator, 2279223..2282690 [Brachyspira intermedia PWS/A] MDLEEKLAIYYQGSAIEDDMAKCEATNDFSKIKRHPYDYFHYKEEFLKDYFSIEDEKLKKRYEHFMKILIYGKDKEGEGGTRYVIFDYIVNRDFEKSLRYLVYGYEKRYKEQARTLNGESLIYTVFEDFNKYFSKEFQEYTDKYIDIINNNDNKKILKKMDRDAVIPLIAICSVIKNNKECDEKYINAAIKSFDVLPNLYDTLNVIAAILDKNESIKNKFIEVLNKNEEYIIDINIILGYHLRSLDYNNPYKAREKFFNAINYPNDFAFIAQHFEDYFHYAFIYGARDLYLNHKEDFYKIYNFVENSLNSDRYNNNRNNDRNKRIFIVLSGVLLEHNNNKIDTNNLKNAVSVLETIVNKFTKDNSDRYNKRPAFTTTVKIEEIFDKDKNKLFDTLIDYYTDKKNTYNLYSTYRWGNTLPEYCLNTELYYLFSLFNYDIDEMKNYKKFALDILKYLPIQIGIRKYIEVQASIGTKTLKEVIDSLLNNKELNITLKEILLSYYFDYAGDLSNYYYDYGGKSLPTLYKELRCVDENNNVIINSVKDELLKSYFDEVVNILNDDKFIKDNIASNKNTALDILRTLYNKCHYNDYHLVYTILENTKRVEVKRHCIKVISDNESITREYVEKMSEKARSSELKGALKNIIKNWNLKKYGEYFKSIDEALEFIDTYYNTNYEKNIKFLEDVHLTKVLYNNGTLADERIFKYIIMEYMNLVEPSRLKDCDMLAEILDTTSFTNALEMLYIHWKDSNYEATKKNILIPYLIYSDDLKIDKVYPLIKEFAKGSRTVMAAFIVKCMALNGKNYALILVDGLTRKSPTAKIKEVAIETMENAAYMLDMTADELSDRIIPNFGFSQKGERVLNYGGEARRTFTLSIDNNLELTITDNEKQKVIKSLPAPNSKDDKAEADSAKKECTTLKKEIKTLIQNQKIRLQKVLLNGRKWTYNNFKTVFVENPIMNIFALKLIWGAYDENNNLIQSFRYMEDGTFNTVDEEEYTLPENSLITLVHPSELDADTIAKWKTQLSDYEISQPIEQLDFKYEEIKEEDIKEDKIHSLDSKTIKAGVLMSLATKYDMARGEAMDGGTFCEYILKDTYLNISVHLSFDYMYFGMDGNEDINFGDIEFCEITDGIETLINPLKVNKRFASSIYSIVKSVFVD >gi|343387113|ref|AEM22603.1| thioesterase superfamily protein, complement(2282963..2283310) [Brachyspira intermedia PWS/A] MKLEHVDKGKAVISCENKKEFSQYLGYMHGGMVSAIADTAGGHAAATMLKEGYKTVTSELKIHFLKPVVSKKVIATGEVLSAGKRLIIVETTVRDEEDNMLAKMIATMFVIEPSK >gi|343387114|ref|AEM22604.1| sodium/chloride-dependent transporter, complement(2283672..2285060) [Brachyspira intermedia PWS/A] MNNEKRERLSSRIGFILVSAGCAIGLGNIWRFPYITGKYGGALFVIIYLICLALIGLPILIMEFSIGRAGQKDIAGSYKVIEKEGSKWHLIGYVQMLGCLILMMFYTSVTGWTITYAYYMATGATLGLTPDGISEFFGKMLSNPAIMILSLFIAVFLGTLICFKGLQKGVERASKIMMSSLFVIVIILIMRSITLDGAIEGIKFYLLPDLSKMFNGGIGNFFEVIYAALGQAFFTLGIGVGSMTIFGSYIGKERSLTNESIIIVILDTSIAFLAGLVIFPACFAFGVNPGEGAGLAFVTLPNIFNSMPMPRVWGTLFFLFLSMAALTTVVTVFENLIAFTMSQFDMPRNKASILVGIVVFICSLPTALGFNVLSFIQPMGKNTSFLDLFDFIISYNLVELGGIYIIIFCVSKYGWGWDNFIKEVDSGSGIKFPKFSRIYITYVLPVILFAIFIINYIYKFFL >gi|343387115|ref|AEM22605.1| putative histidinol-phosphatase, complement(2285417..2286088) [Brachyspira intermedia PWS/A] MKYISNLHTHTIYCDGKNTVEENIQYAIDKELISLGFSGHSHFYIDDTSMSEENTIKYLENIKKAKYIYKDKIQVYLGIEGDYYSNLNKDTDKEMGLDYRIGSVHYIDDGNNSYFPIDMSKDTFNETIKHFGNIKEVIFRYYDNVIKMIETQKPDIIGHLDLVRKYNLNKEYFTEEEDWYIKKVDEVIDVIEKNGCIVEVNTKLMNKNNLNAHYPNKTTIKNY >gi|343387116|ref|AEM22606.1| putative hemolysin, complement(2286329..2287627) [Brachyspira intermedia PWS/A] MDIIIIIVLILLNGIFAMSEIAVISARKSSLMKDSKEGNKGAKTALALADNPDKFLSTIQIGITLIGILTGIYSGDTVAKEVSNLLVKINVPLSYASLIAQVLVVALVTYLTLIFGELVPKRIGMVMPERIAKVVAAPMTILAKIGAPFVWILSNSALLVSRVLGIKDDKSPVTEEEIKSMIEEGRQGGEVKEIEQDIIERAFFLGDRKIESIMTHRNDIVFLDVNMSNDEIKKIVSKHSFSAYPVVDKNLDNIIGVVRVTDIFDKLNTSKAKIEKFVKKANYFHNNMEVYLVLEEMKKNNTKIGLVSDEFGNIDGMITQSDIFEALVGSVAEGKESKDIRKRKSGGWFVDGQCPIYDFLEYFEIEDENASNHYNTISGLILELLQHVPSEGESLEWKNLNLEVVDMDGARIDKVIVNKIEKTDENKTLDNE >gi|343387117|ref|AEM22607.1| thiamine biosynthesis protein, 2288351..2289421 [Brachyspira intermedia PWS/A] MSDKKAKAILLLSGGLDSMLVGAILKRENIDVLALRFVTGLEYAVIKEELLEIYSEDPAKKAADFLNIPIRFVSLKDVYLDMFLNPKYGYGSAINPCLDCHILMLKTAKKIMEEEGYDFIATGEVKGQRPMSQKSQDLINAIKESGLEGRLLRPLSAKLLPITKAEEEGLINRENLYDIYGRSRNVQMKLAEEFGITDYPIPAGAGCAIVDKGYARRYNDLVSNNGKDILNIELMQYLAIGRHIRMNKNVKLLLGRNEKENDALEKRKRINCIVLRPNYNRGPFGYSEIYDDKSENIDKDIIYKSAMIMGYFSKEEKDTLSITASYYNNSDNKEYKSEIIEIDNKESKNTKFEQIV >gi|343387118|ref|AEM22608.1| Sporulation domain protein, complement(2289487..2290197) [Brachyspira intermedia PWS/A] MIFSISSVALILFIFVLGFHLGGSKPVHANNTDDSIAALMRNAQDSENMAATEVSTADMPNNDITALSEYDAAVNNSIIREGNTSADRYNEYTQNLASELDAINENIKEKDTAGLAPNTTYTPPQQMASIAPVKTTTTTTKKSTVPYTRSSSADSIYFIQVAVGYDKDNTYSARDSLKAKFPKAFIKEETMSDGKMMYKLKVGRYETREEAQKALAEIKKIPAYKDSYIYSDKKVS >gi|343387119|ref|AEM22609.1| dephospho-CoA kinase, complement(2290256..2290876) [Brachyspira intermedia PWS/A] MERNIVGVYGLICSGKSSFSKMLAKEMNALYIDADLIGHKALIENKDNIVKEFSSSILDENNNIDRKKLGGIVFCNAKKLKKLQELNYPYIENKVKEMVDSTDKDVVIEAALIMRSKIPAICSSLIYVNAKTSDIIKRMKKTRNISEREARKRLKMQRDVKNNRFDADILINNMKDYNNLIMISKKLGRYYGVKSKSKRRRKRRFY >gi|343387120|ref|AEM22610.1| TPR domain-containing protein, complement(2290896..2292824) [Brachyspira intermedia PWS/A] MKKNIFKKRLLLSLFIFQIFTFHAFSQNTVEDALKLYNERNYESSIRILESLNVKPSDLDSYLLLIDNYMKLNNFAMVETLIADAERYHSRNYKLLERKLMMELMNNRNSEARTTVNDIKRLDSKNYIANYSEGVLSERAGYYQTAMNMYERARVIDRVRPEATVALAYLHLANGDNQIALNLFNENMTNNPRMAESYYHLANYYYLNKDYNKSLNEINNALFYYTNYNDAKILKANVYISLGKYDEAIAILEYMPDTGFQDNFKYYYIGNVYEGADNYVRAKNAYINYLRTKPDDELGRLAYERVLLHTNPTPDYERDRAALYYGNLASYYTRLADNIRAQAYLKHMLKLNPANTYARLMLSDVYRRMGLEEKSLEELEIAKNVNPEEKSIIYKYDSYKRKLDKNIVSKSWGIEQYNLETPGFTVAITDTITAQKDSPLFLNTSLYQTLAYVLPQFGRFKVLEMYTNYYDTIDLYRELNSRNVDYFLRGSAFQNNDTFTIMLDLVDVKSEKVVTNFTVMTRGREKVMGAAVMAGRVVNNSIPFYSKVIKIHNDNIYINAGRMQGVTNNMNLILYDTSAPRTDLSTRGYNRAIGMIKVITADENVSLAKLIDGRLLNKVNLNQIVMPYITNTVQNTNTNAVN >gi|343387121|ref|AEM22611.1| Cell division protein FtsZ, complement(2292840..2294810) [Brachyspira intermedia PWS/A] MADNMKGSEKMAFKNDSSSLDTVIKVIGVGNGGCNAVNRMIEEGLKDVEFIAMNTDAQALSRSNAPTRIVLGDRVTQGLGAGTDPDKGAEAAREDIANIEEVVSGANLVFIASSFGGGTGTGASPVVAEAAKKAGALTIGVVTKPFEYEGKLKMSRAESGIDKMLSVVDSLIIIPNENLYDMVDMDDYSYEEALSVVDDILRQGVQGISDIITQTGFINVDFADVKTMISLSNGRAHLGIGVGKGDDRLQKAITNAFENPLLDVSSIKNARGILANIVCPKDFAMKEYREASKIINNYANDNANIKIGVCPKEDIKDEIIVTIVATGFDANSKNDSENKDVDSHANDIINKSVTSNKKDEVINNNTNTSNDTVTNKTAEPVVESKSDNKVDDKKVNDKEEVNNKPEINKVEVNKVEINEKIIAESKTASKNIAENIVEIDNINTIVKEPEEEKEVELETAQTKTEIEAVNNINVINNKSADKIVVEEEKQEIKEQVLVSNNNDIQETKEYKFENNIRNLKKPLITKTNRFNNINENTFIEEENKSSISNEENYNKNDDIIETFNRTIVNNNSEYAHRYETKERISEEMRFEDEEKHNNPHSDYHKKPFDIVSDDYMEKHNKMGSKMSIFGETYTVDNDLEKPAFLRRQIQARNTMR >gi|343387122|ref|AEM22612.1| MiaB-like tRNA modifying enzyme, 2295136..2296389 [Brachyspira intermedia PWS/A] MNIHIHTFGCRLNQYESEKISYELKNLGANITELDNAEAIAINTCTVTNDSDKKLISYLEKLGDIQDKKVFLIGCYVSKKDKDSSIFKDNIVLIPNEKKEEASEIIFNTLHNNSNNKIDNPIFFPQEQSRAYLKIQDGCNVFCTYCIVSRVRGSHRSVEPSKIYDAIKIANDYNYKEIVLTGLNLGSYNYNNEINFTKILQNILEHSSKYGIRIRLSSIEPIYFDDELISLFKNDDILCPHAHIPLQSGSNKILQLMNRRYTREDYLNITEKLYKTNSNMSISSDVMVGFPHEDNNDFNDTYDLCEKSKFIKIHIFRYSNRENTPSSKMDNQVGYRAKLKRAKILNDLNNKLKDLYYKNAEGRDLKIVIEKALQDNNYIGTSAEYLKCKLHSENTLNKKDLVSAKALKYEGGIMICE >gi|343387123|ref|AEM22613.1| hypothetical protein, 2296778..2298172 [Brachyspira intermedia PWS/A] MINTNKELNNERKQNILNLLNKCKETDKNFKQFASESHKYKLNPPINKNKVIELENKYEFKLPEDYFWFITEVGNGGACHGYSMDKFEDMYFDYLKYDNRIDLMIEYSKKVNEGNANDIEDIDFEYYGILRFGTLGCSSSIGLIVTGENKGKVIYYDDEFYEEPFITCYDNFVDYYENWALETSLDYNMGSFGLRLKLEIDDLIKSYYDILNNEKEDNIINKQSIITTMHKYKSLEEKYLNEIYDLYNLEKDENYKLKFAVLLINHNYKNIEKNIKEAFQNQDIIDSYVKVLYLKVHADTNLFVGNFKKEIFDWTNEIKSALEYYKKIYNEENKTNNYRLLIDMALYLYKNNLIDFKEFDIFINNRNSTILYILSINTLENDNIFNIYINEFVESCSNKNTSQIRNTIAYLENILKNNKKYKKEIINTIKTEYQKLLEYYKINEPKDESIIHFINNTSKRIFNY >gi|343387124|ref|AEM22614.1| hypothetical protein, 2298189..2300558 [Brachyspira intermedia PWS/A] MKYKPTSRKELKDLVTDENIYLGDIDTSLITDMSGLFEFFNRDNYEGIENWDTSNVEDMSGMFTANRNFNKDISKWNVSKVKNMSNMFFSAEKFNQPLNDLDVSNVTNMNSMFMNAKSFNQPINNWNVSKVKNMDNMFHNANSFNQDINDWNVSNVESMNHMFSSAHKFNHPLNNWDTKKVKRMSGMFSLAYAFNQDINNWNVSNVTNMRCMFMFARNFNQPLNNWDTKKVKDMAAMFSSAYAFNQNLDDWNIDNLSDMTNFNKDSALELTIKFKTYLYAFTLDKKEKNNLNDFIKNNAEEVYKTIENNKNKKINLLKRYLINNFYNELKELIPNYIESFNNIEEVYDYIDKNYNKKDDKKVKFIDDIEIENIDKRIIKYIYLSYLELKREPYRIKQIDYITNLLDEKSFINAMKTIYEITNKETSLIMYAIYGGDEALREIYKKEKDSKLCLLVFSINKNSKYAVNMLYNVFRKSKKSEIKEMTEIIIEEMAKENNLSVYELGLKAVENFGFDRNAEKIINNSQYKIILKNNYTIELFDIKENKTLKQIPKNFDDSTKGEIKYIKKEIPNIIKNQSNNLIKILLAGKKYDFNFFKEIFIDNPIMNIFAINLVWNLFDENNNFITTFRYSGDGSYTNCDDDTVNINNNYFVSLSSPIEMEEEIIVKWKKQLEDYELSQPIMQFTNIKINNLEEALKKLQNIEISIGSIKAFSQKYDMNTEYKSYYEINGYSYKDLYNNQKFYMKTKTLNTDTNNNYKIRINIKFNNASNRFIYTCLILLICDFGLTEIY >gi|343387125|ref|AEM22615.1| TPR domain-containing protein, complement(2300833..2302827) [Brachyspira intermedia PWS/A] MIKKEIQQLLELGKNAFKEKRYEEAIYNLEKIIDIYNKDLVFYSDDEFIIYSDDDDNNDDETNYEDINDMHNILISAYYNIGTSKCNLKEYEESIKYFDKTIELNDKYSNAYHSRGVAKYGLGLYEDAIDNFNKTLELDSDFKDAYFIRALSYAKIDKHKEAVDDFNTLLIEYNEINYIYYYYRGLSKYNLNLLEEAIEDFTIAIDYCPDESYIYYERALVYSNLNMFKNAIDDYTKAIELNEMDVDSYYNRALTYFKLEEYNKAIEDYNKVLELNPDDTEAVYNKGLCKQNLGLFEEAIEDFNSIIDSDNEFVCYSLGICYLELKRYEEAIDYFDVFIKFNSCYADAYYYRGNAKFDLEHYEEAIEDYNKTLELDNDHIDAYYERAMAKINLNLYDEAMKDFDEALYDAESDSDRAYLYTLKAALNEISKNYDEAIDNYTKAIELGDDCYCKRAIAKHNAGLIKESINDYNKAIDLDPDNYEIYSYKGNAELDLYLYEEAIRDFDKAIELNPNYDEAYYNRGIANEALKNYDEAFRDYQTTIKLNKEHDYAFNNLGGCYVRLKEYDEALENFYKALEINSELSLPYNNIGEVKSRLALKEKNNIENYNKLNGEALEYFNKSYQTALKNNDEYEINAIMDNMKELAAENIEPAIEFLKNNNIDY >gi|343387126|ref|AEM22616.1| Suppressor of fused, 2302967..2303629 [Brachyspira intermedia PWS/A] MSKEELNNNEEINTSGFDAITETFEKIYPEQKEPLHYRPIISYQLGGKDPLDGISIYRGKGYYHFVTYGFSELYEKESENKEYSGFGFELTFKLKMNEKQINNTKDDDTADNEIKTVVGFLQQLARYVFESGAVFNPYEYIWTKQKEGIDAEQKSKITGFITIPDEAGEINTPNGKVIFVELLGAADSELNAIYDKKITVKELAQKIGTDITDYNRESLL >gi|343387127|ref|AEM22617.1| fumarate reductase/succinate dehydrogenase flavoprotein domain protein, complement(2303634..2305271) [Brachyspira intermedia PWS/A] MNINKKFYCDVLIVGGGIAGLIAAERALKVFKRVCIADSSKICSGASYFPLKATLGIQATKDENDYDKYYEDITNMGKGVENPELIKTYIKNIKRDVYLLKRIGFKPWLRKDSRPACFAKYSRNIFLINDWNGARKRANKIFRKNKRLKIFEESSLIRIIKNNDKVYGAIFQNKDKFFFIKSKMIILAAGGIAGNYKNSLYPKKINGTCHITALDAGAYAQNMEFIQFIPAYLKPKYNVLFGEHTLKYCIGMYDEDNKLILEGINDDKNKKLWIERSAYAPFSIDFESSEIDLKIPYSGVKLKYSEDLYKDKEEFYTVYLDWLKKEMNIDLLKDETLITHFAHSCNGGIKIDSNGFTGVNGLYAIGELSSAIEGANRLGGNSVGGALVFGNNAVKDAYKYIKNNKFNDNKKLNSIEKEFNDWINDISKDDKENNLKKNEVLEKIRELVSENLSVVRSREKIEKFLRKIDEIRSNYSIKENIKDGSIEIYLIIESVKMIALSMLDREESRGAHYREDFKDSSDKIYKLQVKRENNKTIINKIYIND >gi|343387128|ref|AEM22618.1| Na+-driven multidrug efflux pump, complement(2305546..2306889) [Brachyspira intermedia PWS/A] MELNNRTLIENSSINLFSKFAIPSILGMIMGSAAVFVDGFFVAHFISAEAFTAINIVWPITALSFGIYVMLTIGSVALAGKCIGENNIRRANLIFTQTLIVVLTIASFPLIIAYIFRESLLPFFGAHGEVYELSLDYVEGVLFATFFWGMAYVLSQFVRLNGSPRFASAMFIISSLANMVLDPLFIIAFHFGIAGAAWATAISQIIAFLMGLLYFFKPNCRLKIIKIYGGWIYILKAAFNGFSEFLSNFSSGLIPWLFNITAYNISGNRGILVYSVANYAIMFFIMLAYSIGEALEPLVSVSYGARNKNRMKDFLKISVFLITFISVLSSIILLIDPSLLVNTLLKDVDNQTFDDALFFVRTSIPTFIGVGINIIMSAYYTSVQKAGASAIVAALRSMILPVVLVLTLPNIFGFIGLVLVLPISEIATLIVSFALYKNRSADILLTE >gi|343387129|ref|AEM22619.1| GCN5-related N-acetyltransferase, 2307145..2307495 [Brachyspira intermedia PWS/A] MNDTIEKAIYFPKTETLSNEEKANKYFSLQDYTGISVDNDKVFGVYILHPNNIGKCGHISNASYEVSKESRRKRIVEALVRDSMKQVKKLGYKILQFNAVVISNINAHKLYKKNWV >gi|343387130|ref|AEM22620.1| ferredoxin, complement(2307644..2308486) [Brachyspira intermedia PWS/A] MMTSVLVASISSGLIALILAVLLIFSSKIFKVEVDERVTTLTEMLPGANCGGCGFAGCAQFAKALVDDKAPVDGCSVGGPDTAAKVADFLGKVAPEQKEKTRAYIFCHGHNGIAKSNKVYKGAPTCVSAVMAGGTKECSYGCVGFYDCMNACEFGAIVKDEETGMPVIVEDKCVSCGACVKACPQKLIEIHPASQDIHVYCKSKDKGPIAKKACDRACIGCNICVKNTKEGGMKVDNYLAIVNYEDYAVTDESIAKCPTKAITNEKVNSVKSLPVPLKKA >gi|343387131|ref|AEM22621.1| RnfA, Predicted DH:ubiquinone oxidoreductase, subunit RnfA, complement(2308524..2309105) [Brachyspira intermedia PWS/A] MVNLILLFVATVLVNNFVLTKFLGICPFLGVSNKLDSAISMGIAVTFVLVLTAAVSWMIQYYILVPFKIEFLQTILFIIVIAALVQFVEMVVRKTSESLYLSLGIYLPLITTNCCVLGLALFGVLYKYNFIQNIVFALGAGVGFTLALVIMASIRERLMTADIPEAFKGPAMPFITAGILALIFYGFSGIIKI >gi|343387132|ref|AEM22622.1| SoxR-reducing system protein RsxE, complement(2309105..2309758) [Brachyspira intermedia PWS/A] MKNSQVFMEGVWKNNPTFVQVLGMCPSLAVTSSVMNAIGMSVATIFVLVCSSALISLIKKIYANEVRIMGYIVVIAAFVTLTDIVMKAKFYTLSLALGPYIPLIVVNCIILGRAEAFANKNGIIPSIFDALGNGVGFFIALTLLASIREILGNGTWLGFDIVGTLRGFFESAMPFALNAYNEITTPWVVMIMAPGAFFTLGTLIAIKRAIDARGGKA >gi|343387133|ref|AEM22623.1| methyl-accepting chemotaxis protein McpA, complement(2309906..2311834) [Brachyspira intermedia PWS/A] MKINNLSFRIPFIISIMFILCMSIIVLIITIISSRSIEDTAIKGLRVAAKSYSDMIDLYFTEKRLVMDLYSKDPNLAKYLVDPSEENKLAAEESLKEFTREVADTQVFYNYSLVNFDANIVLDSIGGKLLHINYGKNSSDWTRFRDTGFDFAGRDLIQPSSANPLNAICVIWKGVKDENGKVVGVLNSSINWMKFIADYIMPSQLGETGSIMIIDKNKNIIAHNDTNKLYIYESNIIGTSAYERKPETIRAKEDEFFQHVLDAKEGILEYVDDNNVSEIALFNPIHNTPWYLIVSYSQDEIYGDKNRLTKIVVIIAIVMAMIICFIGKLIARSIILPLNMVVNEADNISKGYIVNNDNVSCSTRKDEIGKLMCSFYNMKSALINAVNVANSIAVDAKDKAGEISSKNSKLHAETESNSYKMQETSSITNNIGNSVLETTNYANELINIMKEANSSIDMADSSISEAADNANSVSEASNKIKDITNVIENIAFQTNILALNASVEAARAGENGRGFSVVANEVRNLAQSTSGSVKDISSLIEESQKRIELAAKSTNQSKELFNDMKEKIEKAYSLLSNFNSALKLQKDGIDSISSHIINIEDSSKNNTKLAEDVSEISEELEELSIKLEDAMSFFKIKDDGKL >gi|343387134|ref|AEM22624.1| ankyrin repeat-containing protein, complement(2312431..2314581) [Brachyspira intermedia PWS/A] MMFTDKEKIEFFNAIEDGDIQQIKYLLNKNNYININVFGIAKILIEHENNKNVIEKKDIEIDFKNKDGCTPLMIASYKGNTDIVKLLLEYNASIDMTNDDNYTALIYACIYGRADVVKILLEHKADMYIETKLENNYLTALMIACSQNYAEIVRILLENGYDPNYKNKKGETALIYYSFIKNDKLSTEIIKILLEYGADINSTNSKGSTALMLASYNEEKKDFMMTLLENGADTEIKNNFNQNTALLNACERRNIEGVKVLLEYNANINVQDEFKKTPLILACDANSYDMVKILLEHNADINLSDHRKETPLMYAVYERNTKIVELLLKYKPDLTLKNESGKTALDIAYNRNNYVKEITDLIKESSSREIQFLYAAAENNADKVLKYIAEGIDINNTIDESDDSIGSNALLLASQFHHKEIIKILLENNVDVNFKNYLNKTALEYVANNDNNFDIAVEFIKRGADVNAVDNENATPLMYAASHNAKKILNLLIEHNADINIQTKLGYTALILAAMHNHINIVKILIKNKADVSARDGYGRRCSYYADENWNDEMYKIFRNYHDDEYKKSSQFIFDVLYSKTDEINKYISEGGDVNFQDDGGLTALTVVEKIEIAKILLDNNADINKKGRDGYTPLMMAVRRDNINLVEFFIKNNADLNMTDPEGNTALIVAAQNHKYDIFELLLKNGADSSINSEDLEFYIEFEDEMKDMLKKYGK >gi|343387135|ref|AEM22625.1| flagellin domain protein, 2315198..2316070 [Brachyspira intermedia PWS/A] MVINNNISAINAQRTLKFRQVDLKKDAAQISSGMRINQAGDDASGLAVSEKMRTQIRGLRMAERNTQDGISFIQTTEGYLEETTNILQRIRELAIQAANGIYTDEDRLYVQIEVSQLVDEIDRVASQAQFNKLNMLTGRFARSTGENAPAASMWLHIGANMDERKRVYIGTMNSQALGLKNPVGPAVTATFISVSSPSKANSVIGMVDEALLKVLKQRSDLGAYQNRLEMTAQGLMVGFENMQASESRIRDTDMAEASVKLAKDQILNQANLSMLAQANQLPQGALRLLQ >gi|343387136|ref|AEM22626.1| hypothetical protein, complement(2316120..2316551) [Brachyspira intermedia PWS/A] MCNLCSKYDTCKKLCNDVLKEINKSLGTRKINSDRTDSRESILTNDDLDNILYTNALTDSEYSRVSNLIIAILTPKQKRIMKLFAEGKSQGELAKKLNVTQSAVSQYLSVIKKRYPSSLIWLLIYDYKNFIVYSLKIKGEASD >gi|343387137|ref|AEM22627.1| hypothetical protein, complement(2316556..2316780) [Brachyspira intermedia PWS/A] MNKFQSTIYYKRLIKNILDNIKEDDYFYNKKTNWEEWVIMRVDIKNAIRQLEDVDTENYKPEILDKILCILKEY >gi|343387138|ref|AEM22628.1| RNA polymerase sigma factor RpoD, complement(2317132..2318895) [Brachyspira intermedia PWS/A] MMTEEDCDLLIKNNEKIRKLLEKGNANKYLTFKEINGAIDNMDTDVMDILFQLLAARKIVIVEDKREFESLSKNQNKIDDAAKFIHVEDKVGNNDDPIRLYLKEIGKVSLLTHDDEVDYSKKIESGETEIESIILNTHLVVGEVLNTIKNVQIGKVSIHEILEPPRIYNVSTQEKRKLERKYKNFEKEYVALAEKYLALDKRIKKITTQKTIKALTKEQEEVKENIVKLLTKVRLNRMEIDRIAEKLKFYLHRINQIEEYFEKLKKRYYKEISDFENYYKEIESGNKDIYIRLVDEFNITPEAIEAVITSFHKAQVRMADIYDEVRIDKETLVEWVRKIDSSRRKIAQAKDHIVKANLRLVIAIAKKYVNRGLHFFDLVQEGNIGLIKAVDKFEYKKGYKFSTYATWWIRQAITRSISDQARTIRVPVHMIEQINKVQRVLRQYMQQHGREPSIQEIAKALSWPESRVKSVRNVAKDPVSLNAPIGDEEDTILGELIEDKEFESPQNITTFKILRKQIDSILDSLPDREQKVIRMRFGLVDGYSHTLEEVGYVFKVTRERIRQIEAKAIRRLRAQSKKKELKDFLDS >gi|343387139|ref|AEM22629.1| DNA primase, complement(2318892..2320694) [Brachyspira intermedia PWS/A] MDNLFIEKLNNLLSRVSLVDILRDRYKVIHRGGSQYTVQCPFHKDGQETNPSMSVDDSKGIYKCFTCGAKGNVITYLKEKENKSFKEAVQYLGNRFSVDVSGFFSAKTTQKDKIYLESRRINRIACNFFGKSLFLKDKNGDYFYKDAEKYLKSRKIPFSIIKEFKIGYAPPSWNALMNALTENKITVNNMNILGLVGVSKNNPNHYYDTFVNRIMFPIINEREEIVGFGGRSIDGKEPKYLNSKESLIFKKKSSLYGINIAKSYVMKQDEIMLVEGYMDTIACHKMGIKNVVGTLGTAITEEHAREIKKYTKNVVLALDSDEAGIKAAKSAIITLLKFDLKLTILSIQETKDLDEFFTVYGRSRFDILYNNKLNWYDFVIDTEIKKDISSLSIAEKLNVINSFYKYLDAVKSETEKQMIISYVASKLNVDREAFNKDYLNTYNANQYASGIKYDKKVKNNTDNKFYYENSLIYLLALNPSLIKEAEREISVDLIKKDITREFYIRLLTLNKEASVEDALNVLGNEHIANQILSKKKLYSENIYEKLEELIIKIKSGCIDSEKKELQNNINLDNLDNIYEAARRISLLNKQKEKLHQGSDL >gi|343387140|ref|AEM22630.1| hypothetical protein, 2320935..2321981 [Brachyspira intermedia PWS/A] MFSYFEKSQRRRRILNNIKSRRIIIDKFNIPLGIVPSEYVYPIEGTKIELKNTDNGDVYSYKISVSAEKIFSLYMKLLKLFPSYGTMIIERISEDVNRDFDVLMSDPDVSLNEIRKVFRRYNELWVECGFVGFGVIDELTEFEIFINLDKEIEINTSYKNMKQINRILRSYKLLNDNVSFISDYEHMHYSLSSIVADEGCSEADEYVFDYYDIINNLKSTYGFTTINLNDVNNIIKTPKWWNVTVKGLGKCQKRTFISTYYIVANTIEEMETLIDEKMKDMNVDYYYIYDFYNVDPNDYNYESVNVTNIQNVSFEKAPFGIWGQSDVFICKAKNIASYYINKNYARTY >gi|343387141|ref|AEM22631.1| nudix hydrolase, 2321965..2322531 [Brachyspira intermedia PWS/A] MQEHTNDNFTNALKIKEHVKYQFKYCPYCGEKDSFIFNDVKIFQCSKCKRTYFTNPASAVGVIIETPNGIVFVERGIEPKKGYIDMPGGFCEPYERVEDTAVREVLEETNIKLNDIHFLISGANEYIYDGIMYVTTDIFFYSKLDYVPDAAPNDDASKVIFIKRENIDFEKIAFESAKEAFSYYIKNF >gi|343387142|ref|AEM22632.1| LepB, Signal peptidase I, 2322561..2323091 [Brachyspira intermedia PWS/A] MTNKRQILEIILASLSAILIAGFIRIFFFDTYIVTNKSMEPTFFEGDQILLLKKNFVFNRIKNFDVIVFNYNDTNLVKRVIGTEGDKVEIKDGGLYLNDKLIEHEYYIFSNEDNGLYILGNNQYFVLGDNIKVSEDSRYFGLIDEKDIKGQVILIFSPKKRFQLFNNIFHNNNISE >gi|343387143|ref|AEM22633.1| branched-chain amino acid transport, complement(2323097..2323411) [Brachyspira intermedia PWS/A] MLITALMIVIGTAFLRFLPFLIINKSLSENKYVQFLGKVLPYSMIALLVVYCLKDINIIKFPYAIPELISIAVIVVLHIIKRNVLISIGAGTVLYMFLVQVIFV >gi|343387144|ref|AEM22634.1| branched-chain amino acid transport, complement(2323419..2324135) [Brachyspira intermedia PWS/A] MNTKKHDLIPALKYAFPYTIPVLVGYIFLGMAYGVLMKAKGFDTWLAVFLSLFAYCGSMQYTAINYLFLAPFNPLYAFILTLIVNSRVGFYGISLVSKFQNTGIIKPYLIFALSDETFSILCSADIPENINKNAFLFFVAFINHMYWNIGTLLGCLIGSFITFNTKGLDFVLTALFVVIFTEQWLESKDHRGALIGLICSIPILIFKTNIFIILAMVLIFISISIVYKYNNEDGKIYE >gi|343387145|ref|AEM22635.1| CutC family protein Copper transport, complement(2324137..2324874) [Brachyspira intermedia PWS/A] MNTKIEICVDSVQSCINAEKGGADRLELCGNMFEGGTTPSYGVLELAREKVNATIYAMVRPRGGDFCYDDIEFEIMKKEIKLMKELKIDGIVFGILTKEGRVDKERCSKLLDLWGSSKATFHRAIDVSRDLNEACEDIISLGFERILTSGGEANVMSGIIKLKELVEKYNDKIIIMPGSGINERNIEYIKDTVKANEYHMTANKTVNSLMEYRNENVFMGAALRPPEFSVKYTDENKVKNIKSKL >gi|343387146|ref|AEM22636.1| hypothetical protein, 2325399..2326592 [Brachyspira intermedia PWS/A] MNIKKLLSILFICIMFVVSMTSCNNRVNDPTQNAGGNDSGNNGNDNGNNNNGQIEPTVININLNEKIDDATLTEKFANSKNQYNKYQLSIVGDVTAEDLKTLNLFLGGKYAKGEYTLPLILDFKKANFENNTINDFGKSFGIYLEKITFPDTLRTIGKKVFEDVENLKELNLPDSLISIGDLSFSDIASLERLVIPDSVMSIGNVVFTRTYFIKELKLSKSLRTVGFSSINLSYDATAVLDEINLPNLTYVDASGLSGIKTKKLVLPETLIYVGPRALDISTSEMIKNELRIPKSLKRIEEYSFYGTDVIYLYDTIEHIDMTYSTKAVVYYGTDPNKTVTGGGIYAYDYSVALYLPNVKVGDPNANPAIWETFLLDKSRGYKFLPQNIHFGTEPAQN >gi|343387147|ref|AEM22637.1| hypothetical protein, 2326607..2327758 [Brachyspira intermedia PWS/A] MKHKILTAIFLILLIVSCKNNTMDPSSSNNDNDNNNKPPIENPIKSTVINITLGEKVDSETINTKLDNSFNETGKYEIEIIGDMTDTDLKALNSALKAKFTSPSIKLSLKLKEANIPNNTITSSFGEGYLSSIEKLILPDSVSMIENDSLSLLPNLTELELPENLIIVGNNVFKDISKLTSLNMKNQILEIGDNSFCQLSSLTSINISDSLKIIGRYSLSGAKNIKTITLPYYLSYIKEYAFSDWTSLTEVIFNENTAIIESYAFNNCTSLKIINFEKASALFTYVFVNAFSGINGLDKLYIHSSAQVKIDDNVFNNVKNIIIKGNRNDFVSLTIGGDLSSSKIYFPDIRNGSTYQNYELWKGFLRKSGELWREDQILYNQTI >gi|343387148|ref|AEM22638.1| hypothetical protein, 2327949..2329067 [Brachyspira intermedia PWS/A] MKKLFIMLLLNIIYISAFADTTDITKHLFFTLEGSIDKYPITINIHIENPDNITENKKSNIDGYYQYNNVNTPIPIDGEMDKNIIKFTAFDYDNSNKKEEFRFKINSSQLNNIINLGNGKKNINLGNGKKNINLKGSWQNNNKKLSCNIDTVKPLGDKIHTVYDIYVSKEYKDNTYGLSALYIENLKSSIYEGKIINKINNTNEMIKKINDDIAKVNLNEEEIFYEVNFYNFYNKFFNDNILCFTSSTEYYYGGAYPDTAISHLTLDINKLEIKVLTLSDFVNDSDKFRKALQSEIDKHYKEIGEDDFTIDVINKSDSYYAETLMSRNVAITRHSDGISLHIKFELPHVVRALDDFEISFEKLKPYLKKNIY >gi|343387149|ref|AEM22639.1| hypothetical protein, 2329140..2329748 [Brachyspira intermedia PWS/A] MKDLYKLKQILNESVTIENLNRINDYFVRYLFSHSGNENIALNFINAVFKDLNFETFKNIEILNPSPKAGSRLNIAENYDEKESIVYIKATTETGITVLIEIQSKGNEDFIKRALYYRAYNYSSSLNRASFYDELKPAVSINITNFVLTDEDKVHSCYIFKELNNNKILTDHCQLHFAPKVGFAPFADTYNRIKKIQEKHIN >gi|343387150|ref|AEM22640.1| hypothetical protein, 2329789..2330004 [Brachyspira intermedia PWS/A] MEGSMSEIVKEKPIMEEVQKKYNNFIKSRLMMMEYEKKEAYLHGNQIMLDEERRLGIEQGMEKGIEQGRKE >gi|343387151|ref|AEM22641.1| glutathione peroxidase, complement(2330171..2330527) [Brachyspira intermedia PWS/A] MQDLYKKYKKDGFEILDFPCNQFGGQAKEPIEEIAEFRKEKYGITFKLFDKVKVNSKNADPLFTYLRTEKPTEEGVDKIRWNFGKFLIDRQGNIVGRYDPRVKPEELDEIVAELLKKE >gi|343387152|ref|AEM22642.1| peroxiredoxin family, thiol peroxidase, complement(2330753..2331250) [Brachyspira intermedia PWS/A] MTVTFQGATQNLEGAQLTVGAKALDFTVLKTDLSPWSLKDAGDTVKIISSVPSLDTPVCDIQTKRFNKEAASLKGVTVVTVSVDLPFAQARWCAAANAASHIVASDYNQKDFGRKFGTLLKELQLLTRAVFVLDKDNVVKYVQYVPEITNEPDYEAALNAAKALL >gi|343387153|ref|AEM22643.1| Pseudouridine synthase, RsuA/RluD family, complement(2331365..2332018) [Brachyspira intermedia PWS/A] MKIIYEDDYFIAIDKEAGIEVDNNLINAIKKEYTYIDNLYLVHRIDKFTSGIVILARDEETKKYFEESFKNKTINKVYHAIVQGKVEKEKGTIDISIGIDKKNPNRRIPLSVKEGGESAITHYKVLKRLNEHTLLELKPLTGRTHQIRVHLSYIGHPIIGDKIYSKNADIYKMKGFALIAKEVHFVHPFTKKDVNIDIKYNKEFLIRLKLLESRKRI >gi|343387154|ref|AEM22644.1| hypothetical protein, complement(2332039..2333766) [Brachyspira intermedia PWS/A] MNISVKLHNLLKEEQSELDASYKIEKNKDNIIIISKNGRALHSKYNINNECKRALENINKNKNLLIIYGYGLGYTLKYLLENIDEYFNKEIIKTLKIIVVIEDAAVFKYSYYNIYNTDNNNIFFIYKDDSINYVNNIIDYKSINGINLVLLPSLTKEEKDNANIFYTQILNIMEKEISNIFTNMYFENIWTKNIIFNSEYIKKSSDIIHFKNAFKGFKALLICPGPTLKHSIEYIKKERENFFIICVDTSYSVLCKHGIIPDFIITVDGGFFNSLDFVYENRAFPYLVMDISANKIIPRNINADIIRFTSSENLGIIKYIQKFTELSCLTTSSTVATTMIDFANYIGLDEVLLIGFDNSYPFYERHMKHALSYEYMVNKTNKLKTYESYYFNAIKNNTNIDNYPPTEFVFESQMEYFNEFRDRYSNMKIKRITKEAVKIDSIEEGSIENFYVDNIREKALNIANGIYKKDSDTDIKKAYIELKNILEEFRNILSNTYNNINNNLNNIDELYNETMNLVKEYQKKASILQTILSTTILMCERGERETREKLIFLIAESLRNVNYFFTRISLIIEKL >gi|343387155|ref|AEM22645.1| chemotaxis response regulator CheY, 2333888..2334313 [Brachyspira intermedia PWS/A] MSTSPLGYNTKTGKPYKVMVIDDSSTIRIAERKILLSENFEVILEADGAMDALTKLREAVDKPDIIMMDFEMPQMNGIDLLKRIRALNIDAKIIVVTSYANKGVLMEFLKLKVDGYVVKPVQRQTVMYHLAKVIGREDYLK >gi|343387156|ref|AEM22646.1| DNA gyrase subunit A, 2334511..2337015 [Brachyspira intermedia PWS/A] MAVKKNKEDNSEERQYSTLTKDILKRVDHISIENELRESYLTYAMSVIVSRALPDVRDGLKPVHRRILYAMYDANLTHDKPYKKSAATVGEVLARYHPHGDSAVYGTMVRMAQDFSMRYLLVDGQGNFGSIDDDPPAAMRYTEARMTRFAEEMLNDIEKETVKFVPNFDDSRTEPSVLPATVPQLLVNGSMGIAIGMATNMPPHNLKEVVNAIVYYIDHQDAEIKDLMRYIQGPDFPTAGIIYGKEGIKEAYTTGKGRIKLRARLEVEETKRDREAIIVKELPYGVVKTTLHEKIAELVKQGKIEGVADIRDESSNRAGIRLIIELKKGVATQIVLNQLWKHTDLETTFGIINLALVNGEPKVLNLKELIKYFVDHRVEVITRRTEYDLNQAKAKAHILEGLLIAQANIEEVIRIIRESENTDAARNTLMNRFKLSEKQAQAILDMPLKRLTALEKLKIEQELQQLREFIAYCEDLLAHPEKILAVIKDELKKIAEKYGDDRRSEIIGKTNDTEIDEEDLIHDEDVAVSITTQGFIKRVPASSYRTQGRGGVGVQGGKSQGEHYIEHLFVASTKDYLFIFTDRGKAFWMKVHEIPALTKISQGKSIKFILNLAPEEKITSYFTVSEFDPKQSIIMVTKMGTIKKMELKHLENAKKRGILALTLENNDELVAVSPVQTGDDFIMTTAAGLALRITEEKIRKMGRAAAGVKGIALDDDDICVSGNAIHKGESLIVITENGIGKRLSSKQFNVKGRGGKGQIYIKPDNKTGNVVSVKTVGDKDEIMVVTTDDMTIKIKADSIPELGRNAKGVKIVNISDGARVSDLAVVPADNEEKK >gi|343387157|ref|AEM22647.1| hypothetical protein, 2337277..2337627 [Brachyspira intermedia PWS/A] MDTILKLPYEAEIFIKSKFLKAQIVEIEKIENIFKVELDNEVFITFDEYGNWISINSQKRLPEAVIPDVVQNKISKLKKSETKYQYENLDINEIRRIINSYRVILDHYLEMHIYSN >gi|343387158|ref|AEM22648.1| ABC transporter ATP-binding protein, complement(2337629..2338303) [Brachyspira intermedia PWS/A] MNIKIINVSKVFPLGVNQFNACEDISLDINQGDFISFVGHTGSGKSTLLSIIGGILKPTGGTIYYDSFKLNGANEDVLASFRREYFSYIFQYPVIIPTISVIDNILMPLAFKHKITEEKINQTKENIELFALKDKTYSKASNLSGGEMKKVAILRALAYGCKCLIADEPTSDLDPATTKTLMEILTTLNKQGTTIIMVTHAHNIAAYANNVYEMSNGKIVRCLK >gi|343387159|ref|AEM22649.1| hypothetical protein, complement(2338300..2338863) [Brachyspira intermedia PWS/A] MYNSTIGYASKLIKGSIVFSIIIFISLSQLMAVTSIFSLVWKYEILLNENIPFFREFSIYALFIGIFIIGILYSAISSSYIFSKNSRMFSTLRIFGATKLAIRKLAILISLLYPLVSFAICIIEMLILYLRYSSYILTLIEFSDVINGAYVVLLANAVLIVGFMIGAFISNSILLHKDPYDDLRGTL >gi|343387160|ref|AEM22650.1| conserved hypothetical protein, complement(2338994..2339497) [Brachyspira intermedia PWS/A] MILLFTITSCASNVKVSQSKYNSVWIKAVKGKSVLAPNGYLYTFKENGNVEYKVNGMKRGTGIFLYAESGTNAYYYEKMPLSYVAYDVRDSIPNDKVDMFVGFILNNGKLEMTAGYTKEYKKRLSDWKKSNLTIYNTLREGKDMSEYPIPLIEEVDKFNTIEFGRLR >gi|343387161|ref|AEM22651.1| transcription-repair coupling factor, 2339693..2343427 [Brachyspira intermedia PWS/A] MHNNESIYTELIERFSKSEEFLNFDIKTVKSLTGLKGGSDSLFFASLFNNNEESILIIKENESDAMLLSQSLNFYNIPNYYFPDYDTVPFTKMSPVTDIAQDRINILYKLINKEKCIIITTINAVTRKLPNRNDLKKLPIYLNVGDKLDLDNLRLTLYDLGYVIEREVAEKGTASVRGSIVDVFSVEYDNPIRIELFDEEIESIRLFNIEDGRSFKSVENIIIYPVREAIYSDSAVSEFLNNNEIEDELKDNITKRKYFAGSETLLPIFYNDLETIFDYFDYGYIFIDDALKLKNKLITIIDTIKENFNDIDNMFTIIEDIYKLYIDNNYFSEIVKKSINISPFITDIDIYKFHFEEGVSFKSRLTDFLDYVKEYREKDYLIILSTGHHDQALRFYKIMQDLSPTIITENEIEDEEKDSEDKEITDNKEINNNDNLENSENNEDNKEIILEDTNKKEEIIKDYSKNENNFYIITTQASSGFIKNDIKTIFIADWEVFGRKRKKVRKIPKVNKNLIETFVDLNVGDYAVHVNYGIGKYLGLTRKMSNGKEKDYITLEYAKGDKLYIPVEQMNFVQKYISGHGEAPKLTQLGGSAWDKIKSKAREDALATARELIKLYAIRSNIRGNVYGPDTQWQDDFEASFRYEETVDQLRAINDIKEDMESGKMMDRLVCGDVGFGKTEVAFRAVFKAIMAGKQCAILCPTTILSQQHYNNAKKRFEDFPIRIEVLNRFVTSKQTKKNKELLKTGSCDLIVGTHMLLSKDVEFKNLGLIVIDEEQRFGVKHKEALKKLRLETDVLTLSATPIPRTLNMALTGIRDISIIETPPLNRIPVKTFVTEFTEDAVVNAIERELKRDGQVFYLYNRIDTIESFALMIKKLCPKARICVAHGRMTGHQLEKIMGDFINHKYDILVSTTIIENGIDIPNANTILIDNANKLGLSELYQLRGRVGRSDREAYAYMFYPSDLALTEVAYKRLEAISEHTDLGAGFKIAMRDLEIRGAGNILGKEQSGMIYQVGYELYTQMLEEAANEYKGEIKEVTFDTVIDLKHNLFIPDSYIADSKEKISAYKLIMRSQSDEDIEYAKEFMIDKYGKLPKELEDIFDIAKLKIILKRMRILSVIEGQYNIYLKLDKLSKIDTDKLVKLINTKNSGVYFDKDNLNQLIIPVIHEKENDIEWKLEKIKNVILEIEGENYAPDTNSKNDKNINDNQEEHSKMSVAEANIKNNKNNRKRTVSRRSPKLIKVNKK >gi|343387162|ref|AEM22652.1| transcription-repair coupling factor, 2343599..2344351 [Brachyspira intermedia PWS/A] MIKVLKVSRYELIFEVIKEKKNIKIEELIERLNVSEATIRRDLTFLEKAGKIRRVHGGAILVDTQEESLIYKKEIYSEEKEKIGKFAASLVESGNTIYLDAGTSVFAMIKYLAGIENIKVVTNGLSHIEELYNKKIETYLIGGKMKMLTGALVGASAVLSIKNFNFDLAFMGANGIDIDGYSTPDSEEALIKSEAASKANKTYFLCDESKLKKKSLINFYHLEDSYLITNAKEIDDNIKNKLKDLYIVNS >gi|343387163|ref|AEM22653.1| fructose-1-phosphate kinase, 2344369..2345316 [Brachyspira intermedia PWS/A] MIYTLTLNPAVDYYIDMNNFEEGDLNKVNNAYTLAGGKGINVSKVLKNFNIDSIALGFCGGFTGDYIKKHLKGYGIKENFIYLEEDTRINIKLKTNKTESEIAGKSPNISKEKVNELLNYIKNNIKENDILVLSGSVPNSIDSSIYKDIIANANKNIKVILDARDEAFKFGLKEKVFLTKPNKKELSEYFNKNIESADDIIKYARELIKEGSENVIVSLGKDGSILVTKDKAYIGNAPDGKLISSVGAGDSMVAGIVYGISNNLNIIDSYKYAIASGSSTACSEGLTTFENMNKFLEKVEIKKLIKVYKVNINGG >gi|343387164|ref|AEM22654.1| fused fructose-specific PTS enzymes: IIBcomponent/IIC components, 2345319..2347199 [Brachyspira intermedia PWS/A] MLKDVITLDCINTDLKGTTKSEIIDEMVDILYNNGKLNDREEYKQEILKREAQSSTGMEEGIAIPHGKTKAVKIPTVAIGISKKGVDYESLDGEPSHLFFMIAAPENSNDSHIELLSKITTLLLEDDIREALLNAKSKEEVLDILIKNAEKDNENSSLNHETNNSNDSYQVLAVTACPTGIAHTYMAADALLKKGKELGITIKVETNGSSGVKNELTKDEIKNAKGIIVAADKNVAMERFAGKNVDIVGVKEAIKNPEQLIKNAMNQTAPIYHSNEDNTQTSNKFAKKPKTGVYKHLMSGVSNMLPFVVGGGILIAFSFMFGINASNPNDPSYNYFAKLLNDIGGGNAFFLMVPVMSAFIGMSIADRPGFAPAMVGGLISLNSGGGFLGGLIGGFLGGYITLLLKKVFNKLPESLDGIKPVLLYPLFGIFITGAIMYLFIVNPIAAINTGISNFLKNLGTGNLILLGALLGAMMSTDMGGPINKAAFTFGIAMIASGQYAPHAAVMAGGMVPPLGIALATTIFRNKFSADERDAGKTCYVMGLSFITEGAIPFAASDPIRVIPSCMIGAAISGALTMAFHIELRAPHGGIFVLPIVNNPVMYLLAIVVGSVITALLLGFIKKPAEN >gi|343387165|ref|AEM22655.1| extracellular solute-binding protein, family 5, complement(2347282..2348883) [Brachyspira intermedia PWS/A] MKKIFILFMIFISFIISCSNNNKSEDGISIFINTGPEPNTIDPSINVTSDAVFYLMHTFEGLIEKDSEGKLTPGVAESWEISEDGLTYTFKLRTNSKWTDGKPVVASDFVYSWQRVVDPATGSQYGYQHEPVKNAKAITAGTMPKESLGIKAIDDYTLEVQLEAPTAYFLELLSFPTFYPLRKDIIEQYGDEWTLNADTYIGNGAFKLIERNRDESLVMVKNTNYWNVEDIVPDKITFVLMENETASVAGVKAGSLHFARSFPRQDIKTLQKEGLIVIEPRISSYYYCLNLTNEILKDVRVRRALSLAIDRNYIVEQITRGGEKPAGALVPFGISDYEGDFRKNGGEYIDITENGYAKNVEEAKKLMAEAGYPNGEGFPVMEFKTDPGLHVKIFEAVQQMWKENLGIDVTLTQEEWAVFLQTRYDRNITMARGAWNGDFDDPINFMTLCLSYSPNNYSVYSNKAYDDIINQVMLSGDQKFRMQTMHKAEEMLMREEAIIPIYYYTEPLLVSPKLKGVYYDPLGFHRFHHCYLE >gi|343387166|ref|AEM22656.1| extracellular solute-binding protein, family 5, complement(2348918..2350510) [Brachyspira intermedia PWS/A] MYLTISCTKIEETITHTPPQGKYFSLVINIGQEPYTMDPSINVTGDSLIYLNHIFEGLVGKDKDGKIIPAAAKSWAISADGLVYTFNLRQDAYWSDGNPVLAKDFVYSFRRLFDPNTKSKFAYQYNVINNSKNILEGEIETKYLGVEAIDDYTLEIVLDRPLTYFLEILSYPTFYPLREDIIKLYETNWTEKAETFIGNGPFKVVERKIDDVIIMEKNEFYWNNKEVIPSRLEFVMKNDTQYSLTALKNGLLHFSRNFPIEHIALLQRGGYIHNVPRISTYFYFLNTTNKTLSDINVRRALSLAIDRNYIVENVTKNGERPATAFVPYGIPGFFGDFRENGGDYIDIDKKNYENNIREAKRLMILAGYPNGNGFPVLTLKTTYGTHRKIFEAIQKMWKDNLGIDVNIEELESSDLFTQRFDKNFEMASGGWNGDFNDPINFLSVFLSTSPNNNSLYTNKRYDDLIKTATLITDSSHRMMTMHKAEELLISDMAMIPIYFSSEPILVSPKLKGVLYDSMGQHSFMRAYLED >gi|343387167|ref|AEM22657.1| putative Methyl-accepting chemotaxis protein, complement(2350613..2351899) [Brachyspira intermedia PWS/A] MMLAGALAMVHTYHISRGMSLVTMDQISEVQLLNMRDLINNELNFMKSIKFISEELYCSNIRNRKIYENVMCKFSKKISENAEAVFLLFLPNAIDNDNIYKSDSWYKNIDGRFGIYMGKDKDGNISRLGTENLQLKLSFIEDTIEKNNMYITPIYSVQIQNRYKQVQTCLMPIYSNNDDIIGVIGLDVSSDSMNFDNGEDISTTLFDENGNIIYCNIDSEIIGENFTNLYHPYHNHNVIDMIKSNESLMVEKYNVKKSNRYFYIVKPINLFDDLYWGIEVAIPSIMVLKNNYKMVIMIGIMISIIIILMIIIIPNIISKKVIPVINFFNKNKLKTKSNNADLNNIKSDDAIIDMNINHENTIKYLNAVINALKGKTYKVSDDSMLKKSNDHKSNNDSQFVKEASENSKSINEESEELKNIIEYFKLIK >gi|343387168|ref|AEM22658.1| hypothetical protein, complement(2351998..2353398) [Brachyspira intermedia PWS/A] MNNKVSINVKISLLILMPIIAIILLFGIINTIYTYKMTKEMTLFIISQMAEKEIYEIENIIDVELNYLNNIKYSVENLYNYDVRKRESYEDLMNRFAHEMSTNAASVSLIFFTNVIDNDSMYINNPLYHDINGRLGISLVKDSENNISRINLQASDLEYTYLNTTIKSRKPYITTLNYYPVQGKYRPMYTYSIPIFSKDNEMIGVSSLNLTLDNIIFYEDTNGFTISLFNENGNIMYCTTDIYSIGENITNLSDVYESSDLENTIYSNNTVWKESYNKKTSSKYYNLFTPLHVFDDLYWGIELAVDSKAEFFNHYKIMIMMWVIIAIIIISIFIIVPFIINKKLLSVMNNLNDNITKIKEGDISWSVSENYLNMNDEMGDMSREINDTVVYLNDLINSVKGTANKISENSNNISELVYKINDCCEDNEIEKNQTSNIVNNVNKNLKSLLEESNELQKTIKYFKLKK >gi|343387169|ref|AEM22659.1| putative methyl-accepting chemotaxis protein B, complement(2353419..2355368) [Brachyspira intermedia PWS/A] MFKRVSLQVKISLIILIPLLIMLAISNVVNIIYVQNASSKLSYKILEEVAKGEGNKITAVVKDDLYQITGLKYIIENMYNSGVTDRNAYEAVARNFFRVLPDTVVGVMLAFEPNILGNDAAYSNVYPLTKGQQTYYISRTSGNNIEERALSAADIDADYYKEPISKAREYLSGIYDFDLGNNDVVKMYTWAIPIMYQNKPIGVITADIKVETLNPTMKNIQPFANSEGLLYDHYGNVLYDAGETKNLGKNMYDLYTHYKDYSVFEKVSSGGTVSFENYTAYYKGDATYYFVPLEVSAGQYWILEIMASNKDIFKESDVIRIVMVIISLIIIIIAFIMIPIIIKSKVVNVIISLSKDMQKIAKGDISFKISKEFLNMNDEWGDIANSLDGIINNLNKVVKTVKNAAERVSIEANQVLEGNNDLAQRTESQASSLEETAASMNEMASTIRESAESVAQSTSMVSDAKESLNKAGAIVEDSVNKMNDVYEASTKIMDITKLIEGIAFQTNILALNASVEAARAGEQGRGFAVVASEVRNLAQNTQESVKSITALIADSNEKTNLASESVRESKEIFEDISVKMDSASNIMDRINVASQEQQKGIEQVDSAITNMDSSVQKNAALVEEATAASQALLNEANELIDVIGYFKLQ >gi|343387170|ref|AEM22660.1| putative methyl-accepting protein, complement(2355616..2357250) [Brachyspira intermedia PWS/A] MLIIFEPDTIGNDSDYTNSEKYGPANGRFNYYLSRDDNSKIRTSYFDTKIFQNDTYKKTLSTGETYISDVYKSPVNDKDLFYTWAVPIKTSNRVIGVICLEVNVNSINDSLSQINPFEGSTITLFDNVGTIAYDSDKAIYISKTLDEIYPYYKEHDVFNKIIRGENLLFENFSGTLQKFYTYSFTPVEISKGKYWGLKITAPNDVILKDSDIIRNIMFIISALIVVISAIIVPLIIKRKVTKLIGYTARDITRISNGDISFHISNDFLKLNDEWGDIARGLENTLKNLGNVVSTVKNSAEQVSTAANEVLVGNNDLSQRTETQASNLEETAASMNEMASAIKESAEGVSQSTSMVMDVKECVNKAGLIIEDSVNKMDAVYESSSKIMDITKLIEGIAFQTNILALNASVEAARAGDQGRGFAVVASEVRNLAQNTQESVKNITSLITDSNNKIKLAANSVQESQTIFNEILEKMDNVSSIMDKINTASQEQERGIDQVNTAIDNMDSSVQKNAALVSEATSASESLLSEAKDLIKAIEYFKLKS >gi|343387171|ref|AEM22661.1| putative methyl-accepting protein, complement(2357353..2357523) [Brachyspira intermedia PWS/A] MIPLLIMLIISNAINIAYVKSASKNLSHRILEESSKGEAAKLLSYMKEDLYSLVGL >gi|343387172|ref|AEM22662.1| putative methyl-accepting protein, complement(2357843..2359735) [Brachyspira intermedia PWS/A] MIIVSSLVNIILVNNANRAKSLSYLKKTVEAESYRGQNILKIEFNYLNELASSLEDLYNIGIRDRNTYINVVSNYVRKDEASTIAMGFLLNKDLIDNDADYTNNEFYRDIKGQFGVYLSKNNGNVVQQRILSSDLNADYFVTPKSTSKPYITPLYSYNVAGNNILIYTWSIPVFDNSGKNIGVVIADVTPQSISKSIEKIKPYPESKVILFDSAGNLVYNAGNLEGIGKNGYDVYEWYKTLGIIEKVQSGQSLDFEHFTTVFNEVGTYVVSPIPMLEGHNWGIEILTPSRVIQAETRYIRNTMVLILVFILIVSLIITPIIIKKKVSNIIIVLAKDIVAMSTGDLTVEIPKGFEKRTDEWGDIARGWDKAMNNFNNVINTVKHSAEQVSTAANEVLIGNNDLSQRTETQASSLEETAASMNEMASAIKESAESVAQSTSMVSDAKESLNKAGVIIEDSVNKMNDVYESSSKIMDITKLIEGIAFQTNILALNASVEAARAGDQGRGFAVVASEVRNLAQNTQESVKSITSLITDSNDKIKLAATSVQESKTIFNEILEKMDRASSIMERINIAAQEQEKGIDQVNIAISNMDASVQKNAALVSEATSASESLLSEANDLLKAISYFNLKN >gi|343387173|ref|AEM22663.1| NorM, Na+-driven multidrug efflux pump, complement(2360029..2361435) [Brachyspira intermedia PWS/A] MSNEAVLDNNNLKSNELGNKPVGKLLFQLALPAIAAQIINVLYNVVDRMYIGHIPDIGAKALTGVGVTMPVIMAVSAFAYLISMGGSPRASIMMGKQDYDKAEEIVGNCAMTLIIISVTLTIILLLFSKPLLMVFGASENTIIYALRYLRIYSIGTIFVQLALGLNAFITAQGKAKTSMFTVLIGAVTNIILDPIFIFVFNMDVRGAALATIISQAISCIWILSFMTSKRTVLKLKLKNLKISPNVILPCLALGFSPFIMQFTESILFVSFNTSLLKYGGDLAVGAMTILSSIMQFSFLPIMGLTQGAQPIISYNYGANNLNRVKSAFKILLISCLSFSFLMWFISEFFPYVFVRIFTSDEELINYAIWALKIYMAASLIFGAQTACQQTFVALGNAKISAFLAILRKVILLIPLIFILPIFMENKVMAVLLAEPIADFLAVCTTVTLFTISFKKLMSINANDKLATK >gi|343387174|ref|AEM22664.1| putative 5'-nucleotidase, 2361574..2363094 [Brachyspira intermedia PWS/A] MKNLYILLIVSILILSCSNKANDQKVFTIVHMNDTHSKDKEFITVSKEDGTTNRYGGAARRKTFIDNVRKENENVIVMHAGDTITGSVFSIVYQGMDEVELMNEMGVNVSTLGNHEFDFGIDQLNNIISNRNFPTIACNVKVKATGENYIPPYIITNIKGVHVAIIGVLQSEKMNIIQGLDYIDIEEEVSSLKNLLKEIPLNTTNDITILLSHAGFDTDKKIAQEIPNTFNIIIGGHTHTLLKKPIIIGKTTIVQAGQYGEYIGTIDVIFKNGKYAYPEYTLTRLDENIKEDETILAKIEKMQLEVDKEFNIEIAKLPYELTDENVRNKSTALGNFVSDIVASSQEGIDIALINSGSLRGQLPSGKVTLGNMYEFFPFDNLIILTTLKGKDLKNILELSASRKGEGAFLQVSKDCIINFDSKGKLLESSIKGRTINDNEKYVVAVADYIFNGGEKYIDESGKPLFQYGENTIHTGLDIRDLIIKTLKEYQNVPENAIDNTERIIFK >gi|343387175|ref|AEM22665.1| rhodanese-like domain protein, complement(2363156..2363587) [Brachyspira intermedia PWS/A] MKRNLFIIIALLLTTIVCNAQTAKTNEAVYELDNVKVVNKNGLALNDFISSWKADPNIILVDVRTPQEIKETGTIKGAMNIDYRAKGYSKKILSLDKTKKYFFYCKSGGRSGKTVQYLLDNGFKNVNYLKDAGYTELNAALKK >gi|343387176|ref|AEM22666.1| hypothetical protein, complement(2363811..2365826) [Brachyspira intermedia PWS/A] MKRYLTIKNFRNINPVIVSKEAEYNSEKKEDEVKYGRLYLNGDIEQGALISIIGANGTGKSNILSAIEKSFKGGINGRKDNPKIDGFIGCKPELEIFIEADSGLVYKGKCRTIRIKKTGYSEKDEYKDKLVWELEENKINSDIILSKNYLSKIMDYIYNSTNNVTSKYGSSIYFVYEYNYKYDNKSKTEYAYEDILNYTVSKIMDIISKYKENENIDKLKLLISLLDDESYEQNKNTGYREFNFDENQINKNDLKYLLEILAEIESVNINIYVHRENVKNSELTVGCYSSNGHYHDKTENIITKSHFLRSLFKAADNMEMYNNLIKNYTNILSDVAFAKQTENEINKLFDNTVSKKFNELYKSNNEYKFKIALDEYFIKIYFETRNGITNLENESEGFNWFFSLFFNTINPNELKKGDIIIIDEPEQHLSVPLIKELRKFLKEFAKDNGVTIITSTQIPYFADIHYLDELKIVEPKQDGIGVKIENDFSATYGKVDTLEKIINAFGVKHIDIMRDTKIVYVEGITDYNYLTAFKLLMEHIENREINTAFMPINGVGRPNDERKKNDIIDSLCKLSAKPILLIDSDISADQFTELAEGTNLRITQLEDISSNFVTIEDLFDDNDKQIHKIDKKNKDALDSALFKNNIIDYYEKNLISQTTIDNFFKVIREID >gi|343387177|ref|AEM22667.1| hypothetical protein, complement(2365844..2366350) [Brachyspira intermedia PWS/A] MENKLLREKIRDLGLRISDLAEYLKISRPTLYKYIDMYEEGNRSTIDTKILNLFDYIQNSKNIGSNNVIYYIMNNIVENSNTNNTEEVKRMKIKSLLKTENKTKEDFIYMLTEDNFFDPILDYLMKCKKLSTDPDKKLSEEDYEFISPLMSLYKSQGFRMRLSNKDKQ >gi|343387178|ref|AEM22668.1| CoA enzyme activase, complement(2366611..2370915) [Brachyspira intermedia PWS/A] MEKIFKAGIDIGSTTAKMVVYDNDNMIFKTYVRHNADVKDTLLSILDNLQAMHGDLKLSLAMTGTAGMGVCEKTGISFIQEVIASSTAIRKIYPYGRTLIDIGGEDAKIIVFDDNFKADIRMNGNCAGGTGAFIDQMATLLNVQPSELSVLAEKSTSIYPMASRCGVFAKTDVQTLISRDIPKADIAKSIFQAVAVQTVNTLAKGFEIKPKILFTGGPLTFLPELRKTFLALLNASEDDMYTVDHPELTAAIGAAFGEKEEQTTIKVSELYKLVENISAEVKITNSKTREALFTSQEEYKEWTEEHSKDKVRSADVSTVNGKNTFLGIDSGSTTTKIVIIDEDGQVVLRHYRNNNGNPVGAVTEGLTEIKKELDEKNIKINIARTAVTGYGEDLIKAAFNMDEGIVETMAHYRGAKAFDKDVSFILDIGGQDMKAIFIKDGIIENIEINEACSSGCGSFIETFARGMGYKVADFANIACESARPCDLGSRCTVFMNSKVKQSLREGSSVADISAGLAKSVTLNCFTKVLKITDTSILGDHIVVQGGTFKNAAVLRSVEKFLDKKVIRPDISELMGAYGCALLALDTYNAKEEDTTFIGLDNLQEANDYERKQLTCKGCENLCTVTRLKFKDNKSFYTGNKCERIFTNKGNKERNYGMDITQKKLSLLFDRPLAPASDEIKGTIGIPRVLNMYQNFPFWATILVECGYRVQLSSPSSMAIAEKGSGTVMSDNICFPAKIANGHIYDLIESKVDRIFYPSVVLEKAEDDGSVNSYNCPVVTGYPDVIDSSISPLTKYGIPFDAPTISFLNEDLLYKGCKAYFVKVLGINKKDFDRAFKMALKEQVRIKEELRAEGKKIIEHAKETQTPTILIVSRPYHIDPLINHKIPETIASFGINVITEDGLDIDESLADVQVLTQWSYPNKMFKAALWACKQKDMKLEVVQINSFGCGPDATTSDEIKSILNAYGKSPTLVKVDEISSPGSIRLRIRSMIESMKMKGDFTPSEESNRTIIKRYEKNDRRAILVPKFGHFYDPMILTLLERSGYDTIPLPEPDVESVELGLRYANQDICYPATIVIGDIIRAVQSGKYDPKNIAAGITQTGGQCRASNYASLIKRGLINAGYPDVPVVTVGLTVINDQPGFELSKMDLMKEGIIAMPYADAISTMYYYCAAREVKKGESLALANKYIALHPKDFALKPTDKLLKQAIAEFNAIETNDNLMLPKAGLVGEIYVKYNSFANGDVCDWLMAKGVEVIVPPVFDFFVQKVISEQVNKETNARDVSFLGYYGSKISEKVIDMRIDSINQMMSKFKGFRPAHHIRQIAENAAKVTAMTNQFGEAWLLPGEIATFAEEGVNNVLCLQPFGCIANHIIARGIETRLKTRYPDLNLLYLDMDAGASEVNTVNRLEFFVRSAKDSMNTAANINYVKESIGEYAK >gi|343387179|ref|AEM22669.1| aspartate alpha-decarboxylase, complement(2370945..2371181) [Brachyspira intermedia PWS/A] MDGERVSVINLSNDIRFETEVVKGIRGTGIIGINGDNVHYAKKDDTIIVLSYGHIPEENIKNHKTKIIFVNTYNMILE >gi|343387180|ref|AEM22670.1| hypothetical protein, complement(2371443..2372267) [Brachyspira intermedia PWS/A] MFYLQKESEFSEEYKDVAFIIGSPDFFGAKTEDDNKINVLIMCIAYKDIETGYIEKNKKIVVRMKIYEKELDYYKKIIKRESIVKLKVRYEKEQGEDLAEFLLSDIIDNNYKDEDLNKMLKEYLIPIYYNDEVLGSFLYNRMVGSFDKEIEWVNNKKILTAFDDSNESDKNKAASFLRDVFLNKEEFDKKVKDYSARKIIREGNNISSKNGGNTIDEEVFIKEFMGKMDFLEIIVHEKDDYVNYRLGNKNVFRMDIIVEGNLNGNLFNAFISPF >gi|343387181|ref|AEM22671.1| hypothetical protein, complement(2372308..2372421) [Brachyspira intermedia PWS/A] MSFFIFNSFNIFLRNFIIKNIYYQYSIFFFDNYCYLF >gi|343387182|ref|AEM22672.1| conserved transmembrane protein, 2372408..2373493 [Brachyspira intermedia PWS/A] MKKDIFTSSIGVIIAGAIIGAIAAWLSVMGNPANMGICIACFTRDLAGAVGLHRAAAVQYIRPELIGLVIGASVSAILSKEFVPKGGSSPIIRFCLGFFAMIGALVFLGCPWRTLLRVAGGDINGIFGLIGIIIGGGIGVFFWKQNFSLGQPKAYKNKLVGLLPLVVSIILLILLLKQTKFSEGGPIFFSESGPGSMRAPIIIALIASIVIGFIAQKSRFCTVGGLRDGIFMKDFHMTKGVIAFIVAAFIVNIITNRFSFSMENQPIAHTNILWNTVSMILTGLAFTLGTGCPGRQVIQSAEGNMDSFIFVIGMLVGAGFAHNFNLASSTSGPTTYGMGAVILGLVFCIIIGFTMKENTAN >gi|343387183|ref|AEM22673.1| putative SirA like N, SirA like N, a protein of unknown function, 2373769..2374002 [Brachyspira intermedia PWS/A] MPDTIKVDTRGMSCSQASFQAKCAAINNTELNTIIEVLVSGHSSCESVIRGCKKYGYEGTFKNIENEDILVTLTKVK >gi|343387184|ref|AEM22674.1| hypothetical protein, complement(2374366..2374521) [Brachyspira intermedia PWS/A] MNIKGALMPPFLFNLFLIIIMIVNRIIMFYKNYMYIPKQLYFVKSKVIFLF >gi|343387185|ref|AEM22675.1| glutamyl-tRNA(Gln) amidotransferase, A subunit, complement(2374535..2375773) [Brachyspira intermedia PWS/A] MPLLGVPLAIKDNLCYKDHLMTASSKMLEGYKAPYTAPTVQRLIDNGAIIIGRTNMDEFAMGGTTETSNYGVTRNPKNRAHVPGGSSGGSAAAVAANFAFGALGSDTGGSIRQPASFCGIVGVKPTYGRVPRLGCIAMASSLDQVGPLTKDVKDAALMTKIIAGFDPKESTTLNIPVPDYVAALDGNIKGMKIGLAKEYYDTDLISHDVKENVMDAIGKLKDQGAEIVEISLPNAKYGSRVYTAVMDVEVASNMGRYDGIRYGYHPKGDFNLDEYYYTSRSVGLAFETRARILFGTLMTGKRFFYSHYQHALKVRKLMQMDFDNAFKNVDVIVSPTSPVTAGLLGTRDQTDSALSFLADSYVSNINLVGLPAMSVPCGADKNNMPIGIQFITKQFNEVDMFRMAYAHELASK >gi|343387186|ref|AEM22676.1| hypothetical protein, complement(2376153..2377049) [Brachyspira intermedia PWS/A] MKKLLVMFLFVAVSISAFAYETVPYMFHNMVPYGITPDEVNEILIASNFSSAAAEPISGTFYVSKYPDPDLVWYNPHTMNWINVKFTTNDVSELFTRDSGILYFNFIVTNEFKCMTVRADNINDDATLAGKQTKWAYKFFFHEDKLFAVSAVYEGDYTLEQYKSRNEGKEYAHPGYVMSRGLFSRTLGGFHTKYGGFHNSRYSTFDDFTSMRYGNYANKSANTSLAVYYATYGGKNINFVASYVDNFRMQPIANRFQKSYYENYFDFADVPVGIPPEINPPKDENADENNTQATDNAQ >gi|343387187|ref|AEM22677.1| 30S ribosomal protein S6, 2377302..2377652 [Brachyspira intermedia PWS/A] MREYEILFVTEINDAVHQTAKDHVKTILQNYHAEIFNEADYGIHNLSYPIRKVNQGKFYYYHFRCDGNSLASIEKELRYELSILRFIIVRLDEIIQKNKKENNKENVNNEEASKEA >gi|343387188|ref|AEM22678.1| single-stranded DNA-binding protein, 2377665..2378096 [Brachyspira intermedia PWS/A] MATDFNSVTLIGRLTADPVSKYLPSGSAVVEFSIANNYYVSSKNTTEVNYFDVVAFGKMAETVSKYLTKGKQVAIMGTLRQERWQDKDTNAARSKVRIIMQSMQMLGASSGNVAAGMDTAYSPSVSAGNVDLGSFEDDDEVPF >gi|343387189|ref|AEM22679.1| 30S ribosomal protein S18, 2378134..2378466 [Brachyspira intermedia PWS/A] MDLENTENVENNNNEEEIKAKGEKKPHFNKELNEKDGRKKFFKKKVCYFCKNNIDVLDYKDIKLLKRYVKDSGKIIPKRLNGTCSKHQRLVTKAIKRARNIALLPYETRY >gi|343387190|ref|AEM22680.1| thiol-disulfide interchange protein, 2378626..2380362 [Brachyspira intermedia PWS/A] MNIRLLRYIIITIFITAYISLAQNNNLLNLNQFDSLNKNPEINFNLETNDNKLIVKAIIPNNYYAYLDSKIANKILFFADNKEINTTYPKGKKYHDDTIIKGEQEFILNDIDINKINFIKTTYQLCSAKDNVCLQPQSKIIYGEEIDIANTNITDEKPENASSIENYIKGSNNIFITLILIFAAGLASVLLPCTYPLLSITVSILGTTTDEKNNKKSSVLASLLFALGVITTYTLLGAVVSVAGFAFHKTILFGSIGYNPIVLTILVLLFLYFTFSMAGFYEIKAPSFLQSAKTNAYSKKNQSIFHKYIMGLLAGIVATPCAAPIIAVILEIGFLNPVFATLYMAVYALGFASVLFILGTFASILTKMPKAGTWMVYVKYIFTFLMMIISFYYANILFGVLGFNKISYILASATILVFAVLVYIIKNKSAMLSALEIKIFVSVVIISIALGCTYGFIKQKNEVSNHITYSEALELSKQNNKPILIDFSAVWCANCYELKEKVFVNEELKKFIDDNLIFTEVDVDKYKNISDEYNVKWLPWIIVIDSDKKILYTKNSFSSFDDKMALSIKEELEKIINK >gi|343387191|ref|AEM22681.1| hypothetical protein, complement(2381195..2381404) [Brachyspira intermedia PWS/A] MDDGCKKVCKAIELIENSNIKLFLEYYIEPSFHRGGDTRIMKIYSLLDNIDTKWYILLEKTYFLSNTIK >gi|343387192|ref|AEM22682.1| hypothetical protein, complement(2381422..2382831) [Brachyspira intermedia PWS/A] MSDNIPKPKFISDKPVDENFFEGNNSFTLIKNSIVNIIKGNQLDNKVIALSGKWGSGKNTIINMIKKEEKKDIKVIEFDTLSLYNEHIKKSFLINLANELGIKETCQELEKSKLEELISGTVKKTTKKTGNKLYTSTKLIILVIFIYIVHMPIYKIVSYFGDMLNIFHHSYYKMYNLIISVLVSILILFSFSRSRKDGESDKKNKENKKEENDKNNKCKLIDNIINVIFPFINSSLKTEEISNEETETGDITSLDFKKYYHHIVEQYYRKETHCNSIAIVIDNFDRIETEKIKNILYDLYLFISTNNELDKNIFFIFLIDKEILFNYINGQRNIDTVMNINSKFNDQMNTENISSVNSQFFEKIFTLIIDIPNISHINWGTFFENKLKEAFNNIVITDNTIKSIINLYNVFSFGNIIPRDIIYFINKVVLNYLMIKEGNLFSNEEIFKASIITSFFVIFIDEKNILLST >gi|343387193|ref|AEM22683.1| hypothetical protein, 2383269..2383433 [Brachyspira intermedia PWS/A] MTALSILISCNNKSNNTQNNTTFNNNTNITITNNTTQNTNQIISQQTTPTRKKK >gi|343387194|ref|AEM22684.1| ankyrin repeat-containing protein, 2383577..2384827 [Brachyspira intermedia PWS/A] MQNIKDLLLKGINSKDEDGNSVLTLMHKLDYRNYAYNDLVKWLVEHGISLDDSEILNYNYTDEIIDYLLDSGVNFDYQTVYNKIDLKNNNYNLISKLIKKLESAGYYFSDIDYQLQSDLLFQSILADNLDLVILFFKLGADINSINRMSDGYVGTPLMYSVYYEKYDIMDYLKEKNADITIHCFQDTEELESIHTYDLHISFVLMENFPVLSPTNLINTVITGNNNEDLMIRILNKISQTFKFADTSYIYSPTSQTEFTNNNEKYILIQSHILNEEYVENLISMEKYVHDFEVNDKYFNYVTIWKRDKNDENKAQFITGFYPMQNEDYSQTYDIASSGNYVTIEAIDDGTYYYTFIIENNDFYLDKFSMEKYNRSDLNKKEEEHYYNYKTDAAKFNHTSRIKPIDLERGFFNNLIE >gi|343387195|ref|AEM22685.1| ribose-5-phosphate isomerase B, complement(2384907..2385374) [Brachyspira intermedia PWS/A] MKEIKTMKIAIGCDHSAVELKKEIIKYLEELGHNVTDFGTHTTESVDYPIYGKKVADAIVSKECECGVLICGTGIGISLSANKVKGIRAAVCSEPYSAKLSKQHNNSNIIAFGARVVGVDLAKMIVKEWLDAEFEGGRHARRVDLLTKIENGEEI >gi|343387196|ref|AEM22686.1| acyl-ACP thioesterase, complement(2385425..2386132) [Brachyspira intermedia PWS/A] MYEMKTIVGTSQIDKDGLLKTSSIFDLMQDCSFFQLDSEEDLTKYFNENNVSMFLVSRQVDIYKLPKYSDKVIVRTYVYECNEAYGYRNTVIYDENYNELAICYAIGGFVDLSNGNLIRVPSSFIENFKFDEKQEMNYLPRKIKVDNNLLKEVDRFKVKKYFIDDNNHVNNARYIDMAIDYVDDYYKRIRIEYRVPAALGDTIVVKKAVIDDKVLLKFDSEDNKTYAILEFSYSL >gi|343387197|ref|AEM22687.1| hypothetical protein, complement(2386672..2387385) [Brachyspira intermedia PWS/A] MNNIFYPSKNDNKKIYIAILSKGNINAHDITLECRENAEKDFFKYINFDINKAIFMHQVHKDNIIKIDESNIHLFGSREKLVKDTDALITNLKNIPLIVQTADCAPIILYCDESKSMAAIHSGWRGTVQNITSKTIDLMKKEYNANPSKMYAYIGPYIAQKDYEVGDEVAIHFKNKAMIDDKWYIDNGLEIKDQMIECGILENNIEISSINTYDDICYSYRRDGVQVGRMLTLGVIL >gi|343387198|ref|AEM22688.1| conserved hypothetical protein, complement(2387378..2387614) [Brachyspira intermedia PWS/A] MEYTDKEIILELQEDNKLLSSKIDIYKEEINELKQKLEYAKKFFTLYENIMEQSRNETKELTIKVKELEEEIRRLKNE >gi|343387199|ref|AEM22689.1| 3-isopropylmalate dehydrogenase, complement(2387749..2388837) [Brachyspira intermedia PWS/A] MEKNIVVIEGDGVGPEVVGKAVDILKRIEEKYSHKFNLEYVDMGGASIDKYGVPLTDENLEKCIKSDSVLLGSVGGPKWDNVAPENRPERGLLKLRKGMGLYANIRPTKILKSLEYASPLKETICKDVIDFIMVRELTGGVYFGEHKFEVVDGVKQATDLMLYTETEIKRIGKVAFELARSLKRPLTSVDKANVLHTSKLWREVMNNLAKEYSDVKYNDMYVDNAAMQIASNPSQFGIIVTENMFGDILSDEASVISGSIGMAPSASLSDGTVGMYEPIHGSAPDIAGKDLVNPIGTILSLAMMFRYSFKMENEAEDIEKAVYKAIDDGYRTTDIMPKHNMMTYLYKQVKCSEMGDIILSNI >gi|343387200|ref|AEM22690.1| 3-isopropylmalate dehydratase, complement(2388845..2389348) [Brachyspira intermedia PWS/A] MGDNMKAKGFVHKYGDNVDTDVIIPARYLNTANHKELAAHCMEDIDKDFVSKVKTGDIMVGGDNFGCGSSREHAPIAIKESGISCVIASSFARIFYRNSINIGLAILECDEASKKINAGDEVEVDFDNGIIKNITKNESYKAEPFPEFIKNIINSNGLLNSIKNSKG >gi|343387201|ref|AEM22691.1| 3-isopropylmalate dehydratase large subunit, complement(2389379..2390626) [Brachyspira intermedia PWS/A] MTITQKILAAHAGVEKVEAGELIMVKTDLVLGNDITSPVAINEFEKYGFDKVFDKEKIALVMDHFAPNKDIKAAEQCKQCRDFANKYDISNYYDVGDMGVEHALLPEKGLVAPGEVIIGADSHTCTYGAFGAFSTGVGSTDMAAAMATGQVWFKVPSAIKFNLKGKLKPNVSGKDVILHIIGMIGVDGALYKSMEFRGEGVSSLTMDDRACIANMAIEAGAKNGIFEVDDQTIEYLKDIVKRDYTIFKADDDAVYDKEYDIDLSSIEPTVACPHLPENTKEAKELKNIKVDQVVIGSCTNGRLSDMATAANILKGKKVAKGVRCIVIPATQKVYKECIKLGYMDIFIDAGCAVSTPTCGPCLGGYMGILAHDEVAVTTTNRNFVGRMGDKTSKVYLASPATAAYSAITGYITEPK >gi|343387202|ref|AEM22692.1| hypothetical protein, complement(2390711..2391382) [Brachyspira intermedia PWS/A] MNINNELDDKDIISEEKSLEYLIDNTKKYPNKSESWSKLGEFYFYELNDYEKAIENFNKAIEIDLHNEDNYIKLISIYKEMEDNDNTLKTINKLIEMGDNKEDNYLMLCKYYESINDYDNAIDTIKKVIEFSPEEYNYLRLAQYYDKTEKYDDAIETINKLIELGIAVNDGINYFMLGKYYIKKGENDIAEKHFNKAIELDPDYKSYLENHKFDEETEDEYVV >gi|343387203|ref|AEM22693.1| 2-isopropylmalate synthase, complement(2391463..2392959) [Brachyspira intermedia PWS/A] MRKIKIFDTTLRDGEQSPGCTMNLAEKLEMAAELDKLGVDVIEAGFAICSDDDFNAIREVSKVVENAKLASLARCNKKDIDRAYESLAEAKHPMLHTFIATSDIHLKHKLEMTREQVLETIKESVSYAKTKFEFIEFSAEDASRSDREFLAQAYSTAIENGATTINVPDTVGYTTPLEMADLIKYLKENVKGIENVDISVHCHDDLGLGTANSLSAVLAGATQVECTINGIGERAGNASLEEIVMGIKTRKDFYNAYTDINTKRIYKISKLLSTISGMVVAPNKAIVGANAFAHEAGIHQHGVLKERSTYEIMNVEDIGIPQNKMVLGKHSGKHAFKDRIESLGYDIDDKSLEDKFIEFKALADKKKIVTDSDIEALLIGNNDSENPTYTLNGFVVNDGNSISSLATVSIMDNQENIVEGIGKGNGPIDAAFGAIDSITSNKAKLVNYSINAITEGEDALGEVIVRLASNDKTVIGRAVSTDIIEASLKAYVNGLNKL >gi|343387204|ref|AEM22694.1| ketol-acid reductoisomerase, complement(2393421..2394416) [Brachyspira intermedia PWS/A] MIKKYYDADCNLGLLDGKTIAIMGYGSQGHAHAQNLKDSGMNVIVGLRKDSANCKKAEEAGFKVMEVEEAAKLADIVMMLVPDEVSADIYNTQVAPHMKEGNVLMYAHGFNIHFQFVVPAKNIDVIMVAPKGPGHTVRSQYLEGRGVPSLIAVYQDFSGRAKDYALAYASGIGAGRAGILETTFREETETDLFGEQAVLCGGVTELMKAGFDTLVEAGYEPEMAYFECIHEMKLIVDLIYSGGFAMMRYSISNTAEYGDYRTGRRMITEETRKEMKKVLREIQDGTFASEFIQEFSAGRKAKFNATKKLESEHKLEKVGAELRKMMSWIKK >gi|343387205|ref|AEM22695.1| acetolactate synthase small subunit, complement(2394447..2394974) [Brachyspira intermedia PWS/A] MDKKQRRVLVLFVDNSSGVLNRITLLFSQKGFNIETITCSVTCVPSISRMTIVTEGDDTQISHIIKQTYKLIEVHSVHLIDHTNSIIRDLLLVKIEIDDSNRRKACDITNAHSGVILDIGKKSMIVEITASVTVIDGYLEALKDFNILELSRTGVTSIQLGDEVPDMNIINNFEF >gi|343387206|ref|AEM22696.1| acetolactate synthase, large subunit, biosynthetic type, complement(2394993..2396666) [Brachyspira intermedia PWS/A] MKLNGSDIIMEVLIEEGVDTVFGYPGGAALFIYDAIYKYRDKIKHIMPADETGACHAADGYARASGKTGVVIATSGPGATNLVTPLATAYMDSVPLIAITANVPESLIGKDSFQEVYIAGITMPITKHNFVVRDINDLANIIRKAFVIANTGRKGPVLIDIPKNFTFTETEYERKEKFVPKHVKISAEDEKTIEEVAKLINESKRPIIYFGGGAKDSSDKLREFMINSNIPSVHTLMGAGVLGYNEKLNIGLLGMHGSATANKVMNEADLILAVGTRFSDRVALNTSKFGGVAKKIHIDIDKSEINKNVHVDYSIIGDLNDVLDRFNKLVKRVEDDEWVKYLSDLRAKEMKEDSDRNTKKDGIYPSKVMDIIGNKTKDDAIYVTDVGQHQMWAVQYIRHTKPRSFITSGGLGTMGFGYGAALGVQVAKPDRRVIHITGDGSFYMNLNEVATAVEYNLPVITIILNNSTLGMVRQWQTIFYDKRYSSTDINKKMDYVKVAEGFGAKGFRCETIKEFETAFEEALKCNCPVWIECVIDKDLKVLPMIPAGGTIDDIIVD >gi|343387207|ref|AEM22697.1| hypothetical protein, 2397096..2397917 [Brachyspira intermedia PWS/A] MKILKNRYKNKILYIKNNKRIIENRIENKSGVYKFINYILLIFIFIFSFLPEIIILSLISAVILYSSVSLYSKRYIYSSIEEIPYNDVALVLGTSKYMNNGRINMYFKFRMDAAYELYKSGKVKYILVSGDNRYKSYNEPRQMRLDLIKLGVNKKHIFLDFAGFRTRDSIIRANKVFELTNFTIVSQPFHNERAILIARQKNINAIAYNANNVRKLYRVRQFPRELGARALMFLDILFNRPPKFYGDIIKIEEREDDIIDKSNKFDKSKIKKL >gi|343387208|ref|AEM22698.1| sodium/glutamate symporter, 2398012..2399394 [Brachyspira intermedia PWS/A] MLLIGVFLRAKIKLFQKLYLPASVIGGFIGLLISPEILGKFSNYSISSEWISTYSLLPGILSIPIFAAIPLGMFLNETKSIKSLYPTKVLIAFGIFQCASMFQSAIGYATNILFTKINPDINMYRTFGYELSAGFAGGHGLAASTGKLLEGFGIPQWEIAQGVALTTATIGLVGGMIFGIIFINIAVRRNKTNVIKKVVNENDDNQNINKIDRNMEVGYNNDISKQASLGRETFLSSSIETITFHLAVIFAVCGLAFIVLNFIKKLKVPGLDVLPVWTYSMIIMFALNMIIKKLKLSWMVDAKVKAKIIGTLSDFAIVSAITSLPIKAIIHYIAPIIVMCVAGFIFTYLIVFIFNNMLFKDDYAFERAIISWGTLTGVLITGMTLLKICDPEYKSPALTEFSLGFSLMSVTGLLVVPILNTVLAVGSTWDNLITALITSAIYLIIAFAVYFVHKKSAKQS >gi|343387209|ref|AEM22699.1| peptidyl-prolyl cis-trans isomerase A, complement(2399480..2399971) [Brachyspira intermedia PWS/A] MKEHLFIETDYGTIEIEFYPEIAPKHVEAIKKLANEGFYDGIRFHRVIPRFMIQGGDPVSKDATKRHLHGTGGPGFNIPAEFSDKPHKRGICSMARSQHPDSAGSQFFICVADAPHLDGQYTVWGNVVNGMDVADKIVALKRDHNDNPMENSTMNKVYVKEVE >gi|343387210|ref|AEM22700.1| peptidyl-prolyl cis-trans isomerase B, complement(2400003..2400578) [Brachyspira intermedia PWS/A] MGKKLKIIIISLLGVIVFGTVLIAQKPKTSKEHLFIETNFGTIEIAFFPEKAPKHVEAIKKLANEGFYNGTLFHRVIPGFMIQGGDPLSKQPNRSLHGTGGPNFVIPAEFNDVSHKRGICSMARGASVNSAGSQFFICVADSPFLDGQYTVWGEVVSGMDVADKIVSLKRDANDNPLEPAKMNRVYVKTVN >gi|343387211|ref|AEM22701.1| putative outer membrane protein (tmpB), complement(2400654..2402063) [Brachyspira intermedia PWS/A] MYAQETNELVLPPELPADLPVSIKESDDYKLAQRYREMAIDAHSVGDYNQSIEYSKQSKEYSDKIILRYGVYEYVLNSQRDAERKLSLFKGVGGDTNELTTSLYEESVTDLNSAHSMLETSTNSTDYTNTMLEYNKSAEKSELGYNVLAIDLRREYLMSESVLTNGDNNDTQITNLRDESKNALSSGDYTNSLAKSREAMNMLDMLEAPLAYAKAQDSMDKAKQDGYNNSKPNLYTEALKSLSSAGETLIANNYSDSLMHSKNVISLVNSMESTSGDISSPEEEVIVTDGTVFPQYYIVQSRRTNTDSLWRIASYDFIYGNGNLWKKIYDANKDTIKNPNVIRAGQKLIIPSLKGETRQGTYSTNQTYGNITTFSTNQIEGNIIIEDEKAMEEQTEQTEETVIDEQTDTADENAEMTEDTAATDENAEMTEEDTTVTDENAEITEEDTTVTDENAEMADDETTAEEGNQ >gi|343387212|ref|AEM22702.1| putative lipoprotein, complement(2402151..2402783) [Brachyspira intermedia PWS/A] MYISVFLDKIFGVIMKLKKYIFMPLVFCLIIVVSCSESMPLKEYKDATTLRDKAIRYDLQNYSKEQFDIAEANYSEAMILIDENKDSAKVKELLTTASNSYQTVLNDGLPQYAEVLRSEIDLERVYSKEVKAYRVDKENYEFAELNYINALSALSTNNYEEAVSCFLNAKKYHHKAYFTTKIRYDESTRGIKEAEDKIRQVEELERSSSK >gi|343387213|ref|AEM22703.1| Heat shock protein, complement(2402894..2403358) [Brachyspira intermedia PWS/A] MKKILSLVLIVMGTVFVVSCGGNTSNTTTNDAAAAVVTVNDLLGKEYSLTNMYEGKEVTIAFSDTNMLGGKSAVNNYFTEFSLDGNKIKLNALASTKMAGPEEDMAVETEYLQILNGADTISLDGDVLTITTTSGTNLIYTFKGNVEVASENAN >gi|343387214|ref|AEM22704.1| ankyrin repeat-containing protein, complement(2403493..2403945) [Brachyspira intermedia PWS/A] MKLNNKIFLFFIVFSLLFYNSAFSKSNVELVNAAENGDIKKVRELLRGGANINEQDSKGDNALIKASENGHLKVIELLVQYRCSLNLQNKDGRTAISKASENGHVNVVRLLIDAGAKVNLKDRKDKTALTYASEEKHKNVISLLKAAGGK >gi|343387215|ref|AEM22705.1| ankyrin repeat-containing protein, complement(2404117..2404539) [Brachyspira intermedia PWS/A] MKKILVLIFIISVSVFAQRKMTPLMEALEKKDTKIAIELINSGVDINTKDRMGETPLIEAAEEGLTEVVKVLIEKKANLNAANVRNRTALSRASHKGYTEIVLMLVNAGADRSIKDKYGKTALDYASERGHKDIVSILKK >gi|343387216|ref|AEM22706.1| ankyrin repeat-containing protein, complement(2405051..2405506) [Brachyspira intermedia PWS/A] MENFNYKILIFSFVLFLIFCLNAFSKSNIAIIDAAGRGDINKVKELISSAVNVNQQDRIGENALIKAAEGGHIEVVKLLIENKVNLNLKSKWGRTALMRASSKGYTNIVKVLVEAGADLNIKDNRGRTALTYANQRGHQNIVKILKSAGAK >gi|343387217|ref|AEM22707.1| ribosome-associated GTPase, complement(2405828..2406931) [Brachyspira intermedia PWS/A] MKIKDIGFDEYFEKLALKSLNVNSLEEINNEELVPARVIRINKRYYTLFADDGEFLARIKGKIRYNSEIQSELPVVGDWVLMKKSDNNAFIDTILTRKNILYRKANVKKNDIQAIVSNIDYAFIIVGIDNEMPMSAIARYLSVVHTSGIKPIIAISKIDLYEDAEYKELLAAIKETYPNETAFAYSSKTGKNADTFLKYIKKDTSSVFIGASGAGKSTIINYLLKDEKMKTQEVREYDFKGMHTTTHRELLVLDSGGVVIDTPGLRNLGLWEDDKGIKKTFEDLEEYAKKCKFKDCTHQHEPDCYILELLENDEIPYERYDAYITLLNENRELQKSSIEIKKDRKMALKKITKHRNNYKKINVKNKK >gi|343387218|ref|AEM22708.1| major facilitator superfamily MFS 1, 2407106..2408266 [Brachyspira intermedia PWS/A] MVNLLLAIIYLSFISLGLPDALLGSAWPTMHKELNVPISYAGIISMIISAGTIISSLQSDRLTKKFSTAKITAFSVAMTAIALFGFSITHSYLFLCVWAIPYGLGAGSVDASLNNYVALHYESKHMSWLHCMWGIGATIGPYIMGYAITNNNWNAGYRYISIMQIVLTAILFFSLSLWKKNDEENKEKISTKVLSLKEIIKIPGAREIMICFFCYCALEATTGLWASSYLNLYKGVDIKTAASFGSLFYIGITVGRAISGFITMKLNDNQMIILGESLILIGIILMIIPAVNIVSLIGFITIGLGCAPIYPSIIHSTPSNFGAENSQAIIGVQMASAYIGTLAMPPLFGYIANHISISLLPFYLILILVLMFIMHRLMIIKTIKNK >gi|343387219|ref|AEM22709.1| cadmium-translocating P-type ATPase, complement(2408327..2410264) [Brachyspira intermedia PWS/A] MLKNKERLLFLSEIFLGLIVLILLYTLHKTIHGAIEYIIFFIPYFILGRDVFKNAALDFIKGKFMRESFLMSIATVGAIILHELPEALAVLMFYRVGEYFEDMAVDKSKRTIAALMAIRPDSANIIRENGNVEKVDISEVHINDNIIINPFEKVPLDSFIYEGESWIDTKALTGESMPRSVKVNDEILAGTINGDNTIKAKVIRAYGESSIAKILKLVQDSQNRKANIEQFISRFAGIYTPIVVFGAIFLTVIPTIIYGTEVFDNWFKRSLTLLVVSCPCAFMVGIPLTYFASIGRASKFGIMVKGGVFLDLLAKVDKVIFDKTGTLTKGEFSIRDIHNTGLYDNETLLKYAAYAETGSSHPIAVSIVEHYKNHHNGIINDSLISTHKDISGKGASSIVENKNILIGGLDLLKQNNVEISEIKENINVHIAVDSKYVGGFFIDDSVKDDTKEAIDLLNSMNIKTALISGDNVDRVEAFAKEMNIQSFKGGCLPEDKVTVLEEMMKDSKASIFVGDGINDAPSLARADIGIAMGGLGSDAAIENADVVIMDDKPSKVALAIKLAKKNHVVVLQNILLALVIKFGAIILGALGLASMWLAIFADTGVTMIVVLNALRLLYPLGEKEEAVNIDTKTCDIKVTNCGCGH >gi|343387220|ref|AEM22710.1| transcriptional regulator, ArsR family, complement(2410331..2410648) [Brachyspira intermedia PWS/A] MKKNIKKDIETSDEEYLNNDDDCEISTKDSNISSLIPKLPNDEEFSLLAGFFSVFSDPTRLKIISALSEKELCVHELSSLLDMKQPSISQHLKMLWQARVVKNGR >gi|343387221|ref|AEM22711.1| conserved hypothetical protein, 2410919..2412904 [Brachyspira intermedia PWS/A] MYIFKKQDKDFRNLTNEEINFLKSQGCSSQSWEKILIKNVDLSRIKDVKFYGKVKINALNGMVKYHKKVKLLASINRATLINVYINGNVYINNVGRFIENYKIENGVIIENAGSIYMEGKSSFGNGVETSPIMEGDGRSVKIFYRLNSHIAYLVAMYRHEKVMREKINTLIDEYTKQKTRRFGKIKKYAQIINARLIKNSLIDPYATIENTDEINNTTVISTKECPSYIGTSVILKDSIVLKGAHIVDGTVIKKAFIGEGVKLGRQFSCEDSLLFANCEGEHGEMFSIFAGPYTVTHHKATLLIASHFSFFNAGSGTNQSNHMYKLGPYHHGFMERGCKTGSNSYILWPSHIGAFSTVIGAHYDNVDTSDFPFSYITEHGYHQTRLIPALNLFGVGLSRDENKWRDRDRRKGDKKDLIIFDVFSPYTVSKIIKSEKILEEIKKESNNIYNKDFLTYKNMIIKISSLDKYSKRYSIAIDLYLHNKILSYIENSKNIDEIIKNLQYNEDTIFEKWVDIGGLICAKQRVDNIIKDLENDKINDIKSLTEKFENIYNIYSEDEKSWVMNTVKSRYNINTINKENIKKLLEDHKSLLKEAYNIFYKDVEKEYDISKMVSSGIDDKTMMEKDFEAVRGTVNDNTFVIKYKKDMENKIESINNIINIL >gi|343387222|ref|AEM22712.1| putative ribosomal protein L11 methyltransferase, 2412933..2413802 [Brachyspira intermedia PWS/A] MLIYSLSIKIERGFEDIIEAVIESGKLNILGFNTEFPIKEESISIVNIYNENEEILKNNLSIIEENIKGIAEYTYKIEELKSEEYLTSYMDFLKPFNIGDVTIVPNLKDFYNEECENPLYIAKQYAFGSGTHETTSLALEMIYEYSNNNDIISKSIVDVGCGSGILSLFAYKLGARNITSIDIDNDAVHCTLDNADYNSIKLDNVILGNARDLINMNLKFDLVIANIETDILIDILPDLKELLKPSSILILSGILLEKESYMINAIRENKLNTILRKRKNDWVSLMLNL >gi|343387223|ref|AEM22713.1| gamma-glutamyl phosphate reductase, 2413846..2415144 [Brachyspira intermedia PWS/A] MQLIDLVKNAKEATYKLQSLNTDIKNNALLEIAKKIEENKDKIFEANKKDLEYAQKLLDENKISKSMFNRLKLDENKLIDVVSGIRDVVKLEDPINKVLLETELDDNLLLKKISCPIGLIAVIFEARPDVISQISSLCIKSSNAVILKGGSEGENTNKAIYSIIEETLNNIKEFPKNSVNLVFTREDIKELLSMDKYIDLIIPRGGNSLVQYIKSNTNIPVLGHADGICHLYIDESADQEKALKICLDSKAQYPSACNAVETILINKNIASEYLPKLYDLFKENEIKMNGDTEVKKILTSSDIGEVKEWHFEYGDKEVSLKIVSDIEEAYDHINKYGSHHTDSIISENKDNIEKFMTFVDSANVYCNASTRFSDGFRYGFGAEVGISTNKTHARGPVGLEGLTIYKYKIFGNYQIVNDYVTHKASFKHKRIK >gi|343387224|ref|AEM22714.1| hypothetical protein, complement(2415358..2415744) [Brachyspira intermedia PWS/A] MRGLVFIALFSTISIFSISCSSLFDPDYRGRFRPYDLIGTWRNIDNYYERFTISYNGILTFYNADGTYSRHYIDNWDYYKYDERSYYELVISNIPIVGSIIFYFTSENECEISYGNISNLIYYYEKLY >gi|343387225|ref|AEM22715.1| sporulation initiation inhibitor protein Soj, 2416022..2416786 [Brachyspira intermedia PWS/A] MSKVIAIVNQKGGVGKTTTAVNLSACIAKMGHKTLLIDIDPQANACLGVGVTREQMQKSVYDILIGQAEAKEVIIPTYQENLFLIPADSDLVGAQIELVNEIAREYKLKKAVETVKNDYEYIIIDCPPTLGILTLNALTAADSVLIPIQCEFYALDGVAELNNTIALVKENLNKELKIEGVLLTMYDARTKLASDVVKEVVNFFKEKTYKTMIPRNVRLSEAPSYGKAIGDYDKDCVGARSYKEFAKEFVEKSK >gi|343387226|ref|AEM22716.1| stage 0 sporulation protein J, 2416870..2417835 [Brachyspira intermedia PWS/A] MSRKGGLGGQGLSALIKSTDNEIRTAAEEAERRGVLEIDVSLIDVNPDQPRKVFNEEEIQGLAESIKENGLINPITLREKDGKYQIISGERRFRAFKFLNRDRVPALVLENIADSKMLELTLVENIQRADLNAIEVARSYKKLIYDLNIKQEELANRVGKSRSTISNSMRILDLSENIQNLVLESKITEGHARTILSLDDENEREEFAKEIVEKGYSVRECERIVKERKNNISNDSNTNNNEENTENQNEVKKDNKKDPNIKKLENDLEKIFSTKVNVIDKNGKEGKIVIEYYSSDDLSRIMDMLEKVYERETGIKPTLEY >gi|343387227|ref|AEM22717.1| hypothetical protein, 2417844..2419040 [Brachyspira intermedia PWS/A] MKTILKYILIITIITLNLYPRETMLIATVDLDHSLRANEPMRKEFVRTINRFASLKQKTSISVDREKKKLFSTNELSLEEGLTVASNLKVQAVIIMDSEKVLKDTNNTATNKNITINSNEINTILSNYNITNTMLSNDIVLTNEVKDLGDLIEYGIGEKTEKIDKDGEEKSDEELYEMRYNFKVIDMLTGDTLKEYELKNQSESVTTIQEICTYLEFYFSNLLFKAMESPINGIYLNFRIERITLENKTNVINNEGEIIEGESFTLNFRPNTEGYLYIFAFQNDGNVILMFPNDFNNFINNKYENKIEARKNYVIPPANSKFNIKIRPPFGEDAFYCLYTKKEQQWITGEYFKGDGFQMCPKNKIAEFTDKLKYKLKFISSNDWQISKVYLKSISEIK >gi|343387228|ref|AEM22718.1| hypothetical protein, complement(2419106..2419795) [Brachyspira intermedia PWS/A] MKKVFFCLLLIFINSLFLFSKETIERDLSYNPNFSSSKFNDWLLVATFDGDNVPTLQFIDKTENMFWESSDSSIKEYMYKGKNSKAGIFFISSMTYYQYRGYNPLYTEKRNRANANMMKRFYFYRFTGKGGGIISLDNTLVAIDIYTKYVYIYGVPVEEEKVFGVDVPQRWGPSDTVKYKGSILPFYKYDPVGHVQEDGTIVLYDFYLNSFLDKENRYQPLLNSKYIYK >gi|343387229|ref|AEM22719.1| hypothetical protein, complement(2420502..2421410) [Brachyspira intermedia PWS/A] MRGFESPLTVIGPFLQPIRAIFIAIALFPLRKIIATKFGWFILWLIFACIGIIAAPSSAPSSIEGLIYTQLPLEFHLVNLPELLIQTFTFSIILWVVEMLPHTEKEFSSRVFLLKLLFAIIYTMIGIFLTSICGIIIMNFLELDYNNAKLDRGTVSYLSTISILTIIISYSFADKVYKNKLWLLLTIPLILLLYILFPYGYNYLFNTVYNNNMSLIPYSLSAVLMSIIYYVLFVIIYGKLKNINKKSDIIEADIIETKDAETTDENNDRDNLKVIEINPEDNEDEKKDDVKYIEINPYDNNK >gi|343387230|ref|AEM22720.1| metallo-dependent phosphatase, complement(2421592..2422407) [Brachyspira intermedia PWS/A] MSVKNILCLGDIIGVTGRYAIRRHLEEIKLENNIDFIIANGENAANGIGITRDTAAELFNSGIDVLTSGNHIWNNRDVFALIGNEHRLLRPYNYPSDAPGLGYYIYDMLDCKIGVINLMGRTFMDTLDCPFKKANLAIKHIKEKTNVIFIDFHAEATAEKIAFSYYLEGQVSCIFGTHTHVQTADEKILSSYTAYISDLGMCGSYNSVIGMKKEPAIARFVTKMPHRFEVETTSPMINGIVVQVDTVTGKALSIKRINLVYHNDIVERQEK >gi|343387231|ref|AEM22721.1| metal-dependent phosphohydrolase, complement(2422413..2423828) [Brachyspira intermedia PWS/A] MLQSAREQAENERKTILSEANSEIQKERNRLESENRDRKAEIQKLENRVLQREANIDKKSQYLENKEHNIENKMKKIKEQEDKLTSVIQEAEKELERIAGLTREEAKADLIRSIEEDAKKSATKIVDNIEKNAIETGEKKAREIIVQTIQRLSSEVAQETSVTSVSLPSEEMKGRIIGREGRNIRMLETLTGVDIIIDDTPEAVVISCFDPVRKHIAKVSLEKLILDGRIHPARIEEVVERTKREVEDSIMEAGENAIVDLNLTTMHHELIRHMGRLQYRTSYGQNMLFHSKEVANIAAMIAAEIGANVEMAKRSAFLHDIGKAIETEGEGSHAMSGADLAKRCGEKEEVVNAIRAHHNDVDTQSVEAVIVKAADAISAARPGARRESFESYIKRLDNLEKIADSIEGVEKSFAIQAGRELRVMAKSDMVDDVQAKQIARDIAKRIEDELKYPGIIRVTVIRETRAVEVAR >gi|343387232|ref|AEM22722.1| rubrerythrin fusion protein, complement(2424054..2424593) [Brachyspira intermedia PWS/A] MAAKTLEEVLYQIFQGESNAANRYSSFGKASSNKAIQKVFSTTSLAEKIHAEKMRKLALRSGLDMSKFVPQLNPVEPLSDKENLEAGIKGEVYESTILYPQLAQVAIEQKNKLASDTVNSLGKVETEHAKLFQDIIDNFLNKDGDVTFYLCPSCGNIYRDKAPETCETCGGSGKMFQKY >gi|343387233|ref|AEM22723.1| cytidylate kinase, 2424794..2425414 [Brachyspira intermedia PWS/A] MNNIIITISRQYGSGGRNIGKLIANKLNINFYDKEFVEIVAKRTGINKQYLENVEEKFTNDNLFFSAFHKEHFSSPFSGQIKYSTLDKMFEIQSEVIKDIANKGSCVIIGRCANFILKNTEHKCFNVFVHAPNKDRIERITKEYGVKIEDAETQLINTDKYRSNYYKYYTGMEWGNMINYNLTIDSGYFDEENVCNIIIEAAKKRM >gi|343387234|ref|AEM22724.1| hypothetical protein, 2425498..2425998 [Brachyspira intermedia PWS/A] MKDKIIKDFYENDYFSYESDCDLWNDEKISLLIDFGEEANKSEMLMKYIDKINEILKWIDEHKKNVTDFLIEKQCLELAEEWVTTCEEVDENTYKNQSGELITIPIKEEDFFNAIYIDTILIDFDEDETRPDTTLHILFEPDYFKHHSLIVYIDGERNIEYGDIAG >gi|343387235|ref|AEM22725.1| Glyoxalase/bleomycin resistance protein/dioxygenase, 2426153..2426323 [Brachyspira intermedia PWS/A] MIIVTDLNKSVEFYKNILELNVIMDFGADKTLTGNLVLKTKDTYKDFIDNNDISFV >gi|343387236|ref|AEM22726.1| conserved hypothetical protein, complement(2426856..2427935) [Brachyspira intermedia PWS/A] MELYQELFNDYLKEYYKTLEELLNCLENNDKEKFQINIEPFIYKKDNESEYIKDKNYIERLKLILSILYHKNRNKLMSKKSFEDLLVCLFEEEIKDRQTNSYQGIGTSLEIMSFLFVKLYNDNINKLLSKYKDLFDKAKNANFDCNCGYGIDDYDYYNERLDELSIDAVISYFIDIDELKLCSKLIDIWKDAVKEWDKNNLDKLKYYESLIEDKESLLETTKKLFEMAVKENESNWDIVSALNNYLKSLIDNKKYDYAWQLISKYINNIKNIHDDKFYNINLGRYIIERAADIMLNINNEKLEKEIWSFISEPFTAEHHSSYLKLYEKVLLCCDIVRDEKLKNKISEEYQKELKKLKLY >gi|343387237|ref|AEM22727.1| puttaive chloride channel protein, complement(2427955..2429205) [Brachyspira intermedia PWS/A] MKINFEIKYIKLFTLSACIGAVVGFIVSIYRIILYKLSVNVFYVSNFIFAKWYYPILLFVFLIAMGCLIGYILIHYPQIRGAGVPQIKYYISLHEPKNIFLEILFKLFGSMISFASGISLGRAGPSMHVGMLVGLFFHKYFSKLAKYRRYLLVSGACAGMTATFSAPFTGIAFSFEELGEHKNHIVFVCIVFSSIASILVIEHIVGQGFILNFNLPKILEVRHYISLLPFGIICGILASILNYLMNFFSKMYQKINNDIIRPVPAFLLAGLMIMFFPYVLGSGDLLIGSIVKDKFSVSMLFILIFMKLFYTSVCATSGAVGGIFFPTFILGASIGSLYDIFLVKYFPDYAVYGDLFILLGITSLMSGITRTPIMVCILILEISNSISNFSALVIVAIISYMVAKVLGVTSIYDHND >gi|343387238|ref|AEM22728.1| translation-associated GTPase, complement(2429270..2430370) [Brachyspira intermedia PWS/A] MALSIGIVGLPNVGKSTLFNALTNAHAEAANYPFCTIDKNEATAIIKDERVDKLAALFKSKKKVYNTTTFVDIAGLVKGASKGEGLGNKFLSHIREVNAVLHVVRVFEDGNITHIGEVDPLRDLDIILTELMLADIETINARMEKQKKVAKGAKVKAAEEEVALLEKILPELNNFKPVFSLDLTDTEKEILKPLFLLTAKSMMIGANLSENELANPEKNSNYVTLQKYANERNIELIPFSAKIEADLQDLDEEERLSYLEDLGVKESGVARLTKAGHRLLKLLTFLTSGEDETRAWTVREGAYAPEAAGVIHSDFERGFISAEVINCDKLLELGSFVKAKEAGAIRLEGKQYLMQEGDVVTFRFNV >gi|343387239|ref|AEM22729.1| Rieske (2Fe-2S) domain protein, 2430610..2431593 [Brachyspira intermedia PWS/A] MIYNMWYAVLDSKEVKRNKPLFAKRLNKNLVFWRDSNNNICCIDDKCCHRGASLSHGKICGNNIACPFHGFQFDKTGKTVMIPANGKNTEVNKNFFVEGYEVRELYGFIWLWYGDKDKINDRIMFPDDLKDKKFSYSTIKDEWHNHYTRCIENQLDVVHIAFVHYNTIGRGNKTVVNGPLVELDEDNNILKFYVNNVIDSGQKALRESEMKKEDFKYFLYFYFPNTWQNYIFEKMRVFGVFAPVDDENTVIYMRFYQKIVNIPFIRSIVNLIGKKYSDIVLKQDKNVVKTQSSKESYLGMKEEKLIQGDKPIIIYRSTRDKLKKLND >gi|343387240|ref|AEM22730.1| hypothetical protein, 2431649..2432026 [Brachyspira intermedia PWS/A] MIGISFESSYYLKDDSVIIISLYNNIYDEHLPQVKDLFSEFITKNINNIILDLSDCLFIEKEIWEYLVELKKELLHKKGDLVLANMYGVVKNDYNTMELSNYLESFNDINNAFYNFGILNDIKSA >gi|343387241|ref|AEM22731.1| hypothetical protein, 2432163..2433080 [Brachyspira intermedia PWS/A] MDTNNIYQNMNIDLVKNLMEHYFLAIVIVASISSVVIIGALNKFSGGLSTIIVIGILAFFITLYPAYTVAFDKNIDYLRNELNDKTSLFIDDTGRYFTRVDNYLIKVGYKLLDNTYKNVILVDPTVMGKLYIGDYIYITDKEISLHEVKEINGTSVVEKTSSIFNRNAISNYLSSFTADIIFGFEVFPIIVALLKIITLTEMPIYAIVLLFINLWLMMFAFYMLGLSLNSRQYIYHNILNALLLYGIIKIIFAVSIEQYNLLEVIVRNVNYWTMNLYMFIGSLITIIISLALKKIINNDKKTINN >gi|343387242|ref|AEM22732.1| riboflavin biosynthesis protein RibF, 2433104..2434039 [Brachyspira intermedia PWS/A] MNRIIYDFCKLPIKKDSIITIGKFDSVHRGHQKLIKYTVDYANKNNLISIAIVIKKKNVSIYNTEDNNTLIKSMGINYIIVIDFLPEFYTMEAKEFFDKLIEYYRMKHIAVGADFAFGKDRMGDSEFLKKYSKECGIGVSFINFLNYKKDKISSSNIREALSNGDMVSVNRMLGREYSMSGLVVHGNALGRKIGYPTANLEIPKNIFIPKMGVYSSTVKIGNSDTIYKALTFIGISNINKELRVESHILDFSKMIYGKKITVVLLKYIRDNIKVNSIDEVKKLLENDEKKIRKYFKRRTKQCLSQQTKKQK >gi|343387243|ref|AEM22733.1| ribosomal protein S15, 2434006..2434275 [Brachyspira intermedia PWS/A] MSITADEKAKIIKEFGKNEKDTGSTEVQVALLTNRITYLKGHFQTHTKDNHSRMGLLKMVAKRRKLLNYLRKTDIEAYKNLIQRLKLRK >gi|343387244|ref|AEM22734.1| polynucleotide phosphorylase/polyadenylase, 2434363..2436483 [Brachyspira intermedia PWS/A] MFCGEELILETGLLAKQAHGSVTLRLGNTTILATVVAAKEPNLESDFFPLTVNYNEKYYAGGKIPGGFFKREAKPRDKEILISRIIDRPLRPLFPEGFRNEVQIIPTVLSVDTDMPTDALALIASSAALTISWIPFGGPVAAVRIGYKNGEYIINPKNSELATSELDIIVAGSKDAILMIEGEAKEVSEEVFIGAIELAHKEMQKYIDMQNEMATLCGTQKIQQELFEFDAELVKMVTEYGRNKIEAANYNPDKTKRNESMDNAFDEIEEYIKTQVEDEKLISQVKGICHSIEEEIVREAIVEKGMRPDGRALDEIRPITTMTNLIPRVHGSALFTRGQTQCLSIVTLGSEKDAQLMDDIYGKENKTFMLHYNFPPFSVGEVGRYGAPGRREIGHGNLAERSFNAVLPPKDKFPYTIRVVAEILESNGSSSMATICASTMSLLSAGVPLNASVAGIAMGLATYKDGYKILTDIQGVEDHLGDMDFKVAGTRKGITAFQLDIKLTGISAQILKEALEQAKKARYFILDKIDATIANAGEISDFAPKYKTMDVNPEKIRVLIGPGGKNIKAIIEETGSDVEIQDSGVVNIFAPDTPTLDKTIKLINSYVKDPEVGEVYDGIVKDIKDFGAFVEILPGVEGLCHISELAYKHVMNVEEVLKIGDEVKVKILDIKGGKYSLSRKALLEKPADYVEEEYNKKEKKHGKKRF >gi|343387245|ref|AEM22735.1| ankyrin repeat-containing protein, 2436951..2438276 [Brachyspira intermedia PWS/A] MTVITLYAANNESNNDKVKDITINNTETTDNIENTEYIQIEDNTLIEPDKEADEYAENENIKEETKDNSTFNESNNEKLKNTVMTNEIIMPSEELLKLLEKNKNKTGVAEMIELINEGGINAASKDKIDIEDIICHTNTTSLMLASSFGHYDIAKALIDNGALVNLRAGDGFNALMEAVRTDNIEMAKLLIEHNSDINIKNKDGKNMIMIACENGNEEMFNLLIENNADINEKSSWGASALIYASEKGNINIMQYLIDNGIDVNGKADDNGDTPLLWAVTGENPYEASKLLIENGADVNATNNSGVAPATILAGSVPKVVKLLKDNGADLDTKFANDDPPIAIAASVGNLEIVKALVENGADVNYYPNDMNYTAIYHAIDQGCYEVAEYLFKNGVDLNIELKPSDVYGGAIKESYNVLEYAEAMQDKKMINIVSKYYKKKK >gi|343387246|ref|AEM22736.1| C-GCAxxG-C-C, Putative redox-active protein (C-GCAxxG-C-C), 2438651..2439097 [Brachyspira intermedia PWS/A] MKTNINIEECINDAKNVFGKGFGCSEAIIYALNKHFEFNLSDDAIAMSSSFLRGVGGSGCLCGAVAASSMCLGFLFGRREPHQKVDNCLRLSNEFHDSFKKEFKSTCCRVITKGMEQNSEERKKSCKDVVAFTTETTAKMIMRELNKN >gi|343387247|ref|AEM22737.1| hypothetical protein, complement(2439094..2440275) [Brachyspira intermedia PWS/A] MNSLIKELKTQSQKNIIILALISILPFTIYFLFFALNINSDYRITEITSHFFVFRIFYLFCFSLMFNLDNKKKIFITFLIFLFVGILSVIIPSSEFTFKDIIDRDKKLIFFVHTILNKNLFLDIIFFIMFALSFNQYKNYKDINQAFTFSANIIILTSIVPAIISVMFMMFFAAVINLFRGIIINIFDDTLIVFNVFILSVFYIFAFTPFIIYFLYKKDVKNISIYFSRIIMYISLYNIIKHLFSIIVPIIPYSSPYDIRINFIIYNVALAIGAVNLFFVRMDYKSSIFTKLVYIVFPIVAFIFNIIILTSTIYRIKEYGISPNKLTLIFTNIIMLIHFILIIFDNIKSLKKLNSIKNIKDIILTNNRSYYVYVYGIIAFIVCFIMPLFYNIF >gi|343387248|ref|AEM22738.1| phosphoenolpyruvate carboxykinase (GTP), complement(2440415..2442208) [Brachyspira intermedia PWS/A] MKVEELKHEKLKAWIKEVADMCQPKDIYVCDGTKEEYDNCMNGLVELGLAKPLKKRPHSHSFRSDPSDVARVEDRTFISYPDKEDAGPTNHWMAPDELKGTMKELYKGCMKNRTMYVIPFSMGPVGSPIAKIGVEITDSPYVVCNMHIMTRVGTKVLEVLGADGEFIPCLHSVGAPLADGEKDTKWPCAPIEKKYISHFPNENLIWSYGSGYGGNALLGKKCFALRIASAMARREGWMAEHMLILRLTNPEGKKFHIAAAFPSACGKTNLAMLQPTIPGWKCETIGDDIAWMKINPEDGRLYAINPEAGFFGVAPGTSYDSNPMAMDSIKENTIFTNCVETDDGDVWWEGMGEAPKHGIDWKGNDWTPESGEKGAHPNARFTAPARQCPVICPDWEDPKGVPIDIFIFGGRRASVMPLVHESYNWDHGVFMGSTAASETTAANIGAVGALRFDPFAMLPFAGYNMGDYMNHWLEMGDKLGDKAPRIFYVNWFRKDADGKWLWPGFGDNSRVLKWMCERVEGKIDAVDTPIGKMPKEGDLDLKGLDIPEADFKELMRVDVEAWKDQANQIEAHYAKFGSRLPERLKKQLEELRARLSK >gi|343387249|ref|AEM22739.1| hypothetical protein, complement(2445070..2445252) [Brachyspira intermedia PWS/A] MKKFFVGLFIGIVLTIFSYNVMPKLYSEFSSKDSSALNNIAYELRNIRKILDDIKTELRK >gi|343387250|ref|AEM22740.1| extracellular solute-binding protein, family 5, complement(2445270..2446835) [Brachyspira intermedia PWS/A] MLSCSNLKSSNEGIVVSVGGMPSSLDPAFAKGINTAVYITHAFETLTQRDEDGTIIPALAESWESMSNNTVYIFHLRDNAKWSDGKDLTANDFVYTLRRLIDPEVASPFSLGFDIIKNAQSIMKGDKKLEELGVYALDDYTLKIELDIPLPYFEEAMASDIASPVREDIIETYGEDWALTKDHYVGNGPYIMTEYEEAVKIVMEKNPYYWDKDNVKAEKITFEFLEDVNTAVAAIYADSILFYPEAPENERASLIEQGIGREVDITSIAYYMVNLKRRPFNNPLVRKALALGIDRNYIVNNVLGGGRVAADGFVPINVKIGTNNFRDNAPQYISLEESNYNKNIEEAKKLLAQAGYADIKKFPIIELITTTNPSSLFVAEAIQSMYKNNLGIDLKLRYEEPTTYLQSIKDGSFQMIKAGTSVAYNQASGYLRLFQLDGLGNDGGYTNAVYDYLVDIAMTNANEDIRIKAAYDAERILIQEDMAIIPIYYDKATIMQSKKLHGVKYDIFSIYDFRNAYISNQ >gi|343387251|ref|AEM22741.1| PTS 2-RNA, RNA 2'-phosphotransferase, Tpt1 / KptA family, complement(2447182..2447742) [Brachyspira intermedia PWS/A] MKDNKLTKEEIKISKFVSLVLRHKPENIGLTLSKDGWANVYELIEKIKATGRNINEDILERVVLYNDKKRFSFNENHTLIRANQGHSINVDLQFEEKEPPEILFHGTSIDNIESIKQEGIKKMGRLHVHLSLTEETAKKVGERHGKPAIIKINSKQMYEDGIKFYLSENKVWLCDYVDPKYIIDVI >gi|343387252|ref|AEM22742.1| predicted glutamine amidotransferase, 2447928..2448644 [Brachyspira intermedia PWS/A] MSVIGLSGNILYENNSIPKAFINRSYVDSVIRSQGAPFIMPITEDKEIIKKMVENVDGIIMTGGVDVHPFRFDEEPIEKIGTISAERDEFDFTLMKYAVEMNKPIFGICRGIQVINVYFGGTLIQDIPSQRNSNILHSQTAEYHTATHKIQIVKDSIIYDMLGETAEVNSFHHQAVDKLAKDFRVTATAKDGIIEAIEYKKKDSFILGVQWHPELMSSRIIKMQNIFDMFVEVCNSRK >gi|343387253|ref|AEM22743.1| hypothetical protein, complement(2448647..2449504) [Brachyspira intermedia PWS/A] MKLIKFLFIFTIIYTLIIIKPLTAQTNLQAGLYIGADLNGRFSPYLDGGGKIMLFYRFISDVFPGYIWEGIKTDLGISDHISAEMNRLTIFVNSSISEYFNIDARFSMLNYYLSYAKRGFVNFNSPQDEFGTNGIANAPKTSNLSFEAEITPTFKVSLFRSLFEGRGLILQAGLTFKYAYNMFGKYHLDYDLLLIRDQNDISYKLDSMILFDLMPLTVGINYMLAYMNNTKQLWHSIGAYAHFQYEFINRIYTEVNLRIGQYLGHPEFPATLYFDMNAMITYRII >gi|343387254|ref|AEM22744.1| recombinase A, complement(2449663..2450949) [Brachyspira intermedia PWS/A] MATKKKETAEVKKDGKSEAIEAITDQINKKYGPGSFMRLGSNKTVNVDVISTGALTLDHALGVGGIPRGRIIEIYGHEASGKTTLTLHIIAEAQKAGGYAAFIDAEHALDPVYASALGVDIDNLYISQPNSGEEALEILEKVVSSTAFDIVVVDSVAALVSKAELAGDIGDAHIALQARLMSHALRKLTAIISNTNTAVIFINQLRQNIATTGYGAGPTETTTGGKALKFYSSVRLDIRRTEWIKKGDDTIGHKVKIKVVKNKLSSPFKVVNLEIIFGKGISSEGLLIDLAMEAKIITRSGAWFYYNGEQIAQGKEKVRELLASDPKMRMELEIQIRETLNMGGADKVKEKLAEYLEEQKNGGAKEAVKENNDDENNEAASSKKKSKKAEEDEEANLLMSAEEAYSDDDDETYSDNDFEDTIVTPVKN >gi|343387255|ref|AEM22745.1| hypothetical protein, complement(2451589..2452305) [Brachyspira intermedia PWS/A] MSFAASGWQFGFMVPIGMSLGFYNIGFDNNVSEEYKKNYKKDSGTVGFDAGVNIYGGYAVSDGDIGISLLLDLGYSHDSFGLSGSYKENNIDYTKKEYYTFENFSIGILPKFHYQNFAFGLGIGVKLPLYLTHSMELTSGNTTTKTESNYDINNMNNVMKNSVITYVKLTFDYSFYVHEKVALLLGAYIGTDFGIDLRGTEGYYDSANKWVKVIDSRNLASFDLGIQLGMKFGEDLFN >gi|343387256|ref|AEM22746.1| iojap superfamily-like protein, complement(2452382..2452843) [Brachyspira intermedia PWS/A] MKLHNDKNNENKELKNNEANKVLETKLKKRKKKFIDKEKAKELTLKAAKALYDKKLEDIVILDLEDVTSLSDFFILATASSSPQMKAGSDAVYKDLKEEGVLPYAENDNDPEGVWYLSDYGFLVVHIFTEEGREYYNLDKLWHEAKKIDMPEI >gi|343387257|ref|AEM22747.1| hypothetical protein, complement(2452827..2454026) [Brachyspira intermedia PWS/A] MNDKALKTISQANKKAVMLIIFSIIFSVSFIVIIFYYFFISKLDIAKKNDEPLYFSVLFIDDNNDIYGAYVGIISSLNNRIGLIGLPRNIALWENNDSAPQVIRELYKNGGENAVFRAIENSVNKKITYRIAIDNNQISDIIDLIGGVKMYVEEPINFKDEEKGYELSFDIGEWMFTGKKIISYLHYLNMKGYEDIETLYRLEDVVVNSMIALIQSPQLRNIIHSKDMRNAIFSKVKSNLRPPDIKAIMNILANSNERTLVIENIDARVDDNGILTPIFEGSAFIKQMDDLTLYVELKTQKSELNNEDVSLTVLNATTVGGLADRINIRMRYRGFAAGEYGNFGTNLNESVVLIRDGQIEKAFMVANEGRVTRVYAKTDRRVLNNAVLILGNDYYEITQ >gi|343387258|ref|AEM22748.1| hypothetical protein, 2454191..2454310 [Brachyspira intermedia PWS/A] MNFFRKIIFIFGILLSLISINALMACKNPKKEEEIDKDY >gi|343387259|ref|AEM22749.1| hypothetical protein, 2454315..2455295 [Brachyspira intermedia PWS/A] MLFIKNKFILLIAILLFSINAYSITITILPFESVDETWVEEYKADDGVVRVLEDSLVNTKMVNVTDYDLLISYFSSYDIVASYKTMQTNLQLASDFIKETFNSDYIITGEILNFNLKKGGKDTANVEFKVNLININTLRTVKSFTDTGTYTLPNNSPVYSAEDALFTETALGAASAIALNKIANKITEYLGNPPLTGIVTRIENNKLYINLGKNNNIKVGDEFNIYKVDKVLKLPTPENNPTNNISNIPKIPVNNNNTEKGYISVRSNQEGDVWYTSEMLYKYRFYKNEEKLVASAKVIEIYDYYAILEYKLDAKIEPMMIVKIKN >gi|343387260|ref|AEM22750.1| hypothetical protein, 2455307..2456290 [Brachyspira intermedia PWS/A] MISKQNVLYNEIEKDDYYIYIDQKTNKGIFRPYYKGSCNSFLYDFKLDICRTFHKNARSYSIVDMSLDGTKIMTISVTSNDSQNNVFKIIEIGTNKVLLEINDLYVYEAFFTGNPRYILIRAREVNIMKVFVYDVQTKKTMHTLKENILIGNGCFNEQRVIFTYPSITENRVINYLNFNTLTETKELIGYSEIRVSKIFDAANKELLLVDNDESVSLYSNKKIIWKIQFLSFLNHYIGGFFYLKEDNKVYLDTPAIIQEKMSNNQIDAMVLYRIDAYSGNIETIQLPAKIKYKKFTHMFDYKLIDTAGNIFDLKDRTAYSFPLNVHR >gi|343387261|ref|AEM22751.1| bifunctional methionine sulfoxide reductase, 2456369..2456815 [Brachyspira intermedia PWS/A] MIIVISCDETANKEVCNVCNETKTLSAKEYHVLINKGTEIPFTGDLLNIKEDGIYTCKICDTPLFYSEAKFNSGTGWPSFDDAIKENIKLVPDGDRIEVVCAKCGGHMGHVFYGEGFTEKETRYCINSVSLNFVNKFTNENNNENSEK >gi|343387262|ref|AEM22752.1| bifunctional methionine sulfoxide reductase, 2456973..2457482 [Brachyspira intermedia PWS/A] MNNSTAMPENVKYAYFSSGCFWGTEYWFEKSKGVLSVVSGYAGGHKVNPTYQEVCTGLTGHLETVRVAYDPEKTTYEELVKLFFETHDFTQKNGQGPDIGSQYLSAIFYQNDEEKEIAEKYVKMLREKNYDVATTIRPYKNFYEAEDYHQNYYAKKGSMPYCHFYTKIF >gi|343387263|ref|AEM22753.1| phosphodiesterase, complement(2457554..2458450) [Brachyspira intermedia PWS/A] MNFLKKVSKRNKIIFLVVIIFVFTMHLYMYKTAHSMRVRYITLEFKDLPKSFDNMKLALAADMHAGLYIPESHVRRMSDLIMNEKPDMILFGGDYIYSAPHKFSHYDKKNTEKFNNGIKGLEAKYGKYAVLGNHDNWESTEDISNALISNGFKVIDNNISFITNESGEYISIGGVGDFLTDDVKFDIATSNVKAEDFHILLSHEPNIPLKRAKDGGYMKFIDFFFSGHTHGLQISFLPMWVWEGINKNREYPLFPAVYGLMNYANMKVYVTCGIGAVLMPLRLFAYPEVVIITLKSSK >gi|343387264|ref|AEM22754.1| hypothetical protein, complement(2458467..2460569) [Brachyspira intermedia PWS/A] MKKINILICLISIVITFTALFSVNYLGKNDSDTSLSNINIMNSTYKESRDYILDDYYIFDYSDKEQKLRDIFKSSPIASRLKYRASLISHLGEEEIVINGIDIKNDDEVFGILNNRTLENFNPDNSIIISKSIASVLDVNTNDTIILKLITKTGHYNAEEYTIIEVSDNLNYNYALIDINNLNNFVGLENAATEIYVKQNISDDKLFDYDNDINQIFGNGFGAYTKKDILGSDYKANENDSKYKIYIILIYLFVLLSVFIFINSYTIYSYRDLLKSKLLYSASGFAISFIIYFFILLYKGELEFDYIYPLLFIINILSVIIANVKYQVWEKVFLQDDEYKKSKNILIIFGLVCTYIIVFLVLYISFFVFANKSNENINKESPEKIFRIVKNNTSRNTFLFNGSIDFSTNNSFSNDINDSITNLLFKEISSYDEYADIETVLTFPVGVVIRTGSIYSRVYAYDKNILENGMSVSNILIEGEMFESPKREIIIGKDLANYLNLKIGDALSLIAKASRGWLETGYFYVSGIYDLKNKNYDIIGDVTAMNSFIYLKEGDKSPYNESIIVFSNNDDIYSLLNKSEIINNNDLKIVSADKVYYMQNSSSIRNITILLIITLAFSLALLSSSVLSIFHRRLSKYINAWNKSLLLNGLYALSFVIAIILSIVIISVFMIFSIKLVLFSLCIVLLSFVLSLLISNYNYI >gi|343387265|ref|AEM22755.1| lipoprotein involved with copper homeostasis and adhesion, complement(2460762..2461136) [Brachyspira intermedia PWS/A] MLAISCSNKTESTQNTADNNAAAETQLSSNTQVFEGDFVYYADSANFSNYTEMKNYPVAMEGEYLNLEREYTGFNFAEPTKVNLKVEGYLEERPGMEEGTTNMFLIVTKVIGFDTNKTTPLFQK >gi|343387266|ref|AEM22756.1| lysyl-tRNA synthetase LysU (class II), complement(2461266..2462798) [Brachyspira intermedia PWS/A] MSENQNNSENTQNEKNTSVEKNAEKENRREKLNTLRGMGINPFPNSYDVTYKSKDIAEKFEELEKNETEVAVAGRIMLYRVMGKSSFLTIKDAVGTIQAYIQKDKVGDEFYNTVFKKLIDIGDIVGVKGTVFKTKTGEITIYANELKLLTKSLNPLPEKFHGLTDTELRYRQRYVDLIMNDDVKEAFIKRSKMISAIREVMIENNFLEVETPMMHPLIGGAKAKPFITHHNTLDMTLYLRIAPELYLKRLVVGGFDRVFELNRNFRNEGISTRHNPEFTMMEAYMAYANFHKVMELVEEVFSKVCFKLNGKYTSQYKDYEINFKPPFARVPMVDLVKEHSGLDFNAIQSDDEALEKAKSVGVEIDTSKTKPTKWEVMVAVFEEKVEEKLIQPTFVINYPKAVSPLSKSYPDNPDITERYELFIGGMEMSNGFSELNDPIDQKERFEEQLKAKARGEDETMDMDLDYINALEYGLPPTGGLGIGIDRMAILFLNVASIRDTILFPQMRKLD >gi|343387267|ref|AEM22757.1| extracellular solute-binding protein family 5, complement(2462929..2464530) [Brachyspira intermedia PWS/A] MKKIIYFLFLFVSIIFISCSSENNKSHELFINVGSEPKTIDPALNISIADSTYIIHTFEGLLSKDKEGKLIGAAAERWDISEDGLVYTFHLRTNAKWSDGVDVTAEDFVYSWRRVLDKNTASGGSLQLEPVKNAKDIILGKLNSDSLGVKAINNYTFEVTLEKPLPYFLELTALSTFYPVRKDIIEKYGDTWTMNPESYIGNGPYMMIERNIDDKIVMVRNANYWDYWNLGPEKITFIIMNNPTASEAAIKEGSLHFSTIIQNNDIDKLRDEGFLRYINKLGVVYYALNITNEILKDDRVRKALSLVIDRNYLVNNVVKSGLPAGSLVPFGIPYSEGDFREIGGDYISVKPENYDTNLYEARRLMAEAGYPNGSNFPVITFLSDSTASSQIFEAVQHMWKETLNIDSTIDQEELAVFLQTFFADKNYVVARGGWTADYTDPMTFLSLFLSYSPQNHSSFSNEEYDNLIISSMSMTNEIERMNTLHKAEKILFDNDVIIPLYYDTVPILINPKLRNVVYDTLSRYKFTYAYLEE >gi|343387268|ref|AEM22758.1| hypothetical protein, 2464715..2464945 [Brachyspira intermedia PWS/A] MNNKLKIIKYKAILFFIGLIFLSASFIIIYLHFRFNNENIIKINANIESIEHYEYGIIKKQKFANVIYSFTYEGKK >gi|343387269|ref|AEM22759.1| Conserved hypothetical protein containing a ferredoxin domain, complement(2465196..2465966) [Brachyspira intermedia PWS/A] MKIYEIIFSPTGGTKKVADAIASEISQKTNSSIEKIDLTDYSMDFSSVKISQDDIAVIAVPSYAGRVPEIASKRISQIKGNGANTVIVSVYGNRDYEDTLIELYDIAKELNFKVTSAIAAIAKHSIAYKYASNRPDENDIAKLKEFAGNIINASEVLDEHKLKGNRPYRQISKVSLVPKTTNKCNDCKLCAKKCPVQAIDINNPKIIDKNKCISCMRCVSICNSSAKYINKIMLIIVHFALRKSCSKSKDYEFYIN >gi|343387270|ref|AEM22760.1| ankyrin repeat-containing protein, complement(2466965..2468068) [Brachyspira intermedia PWS/A] MKKLIITALILISIISCNSKKTDNTEVTTDTNAINSNNTETSNNDEYVEDNNTEEINTDTAEISESGIEVPGWDLEAFNDLKNVKDAESLKSWEEKHGERSLIMALQYGDKKMVTELLSYGVNVDQTYLDNDSPLKTASAKGYLELVKEFIKRGADVNFIGDGNIDALHSAVMSTNENSLKIMKELLDAGAEVDLEYGWEEPVPILLDTIGVDESKCDLEKFKMLAEYGADINYVDSYGYPLIRYAVNAGCLDIVKYLVSKGIDPAMKYELKEYYPNVNISLLASTLYNSDTEMAKYLIEQGADVNTPIPSEDGYPLLLQAIDNGKTELVKLLIENGADTTVVNKEKKTVFDIAREKGYDDIVALDK >gi|343387271|ref|AEM22761.1| conserved hypothetical protein, complement(2468651..2469757) [Brachyspira intermedia PWS/A] MKKIIITALMLIGIISCNSKKTDNTEATADTNAVNNNNTEISKNKISNNDDEKIYQGYASNDMWSIYKTTMLEEEKKLFNEIDSIKDKNSFNDWQSKNPSKSSLVFAIDKFPTEEKAIELISYGADVNMKDDNDSRTPLELASKMGYLKLVKKLIKKGADVNFREEEGGDIDALYYAVESEKNYHFEVVKELLNAGADTDIIYGTRNILNVAIIGRCNLEKVKLLTEHGADINYSNFEYGPVIAVAISQGCIDIVKYLVSQGVDSAMTYTNVYSLYSGKSYSLLNAAVRNKTTEIAEYLIEQGADINTQTDSVSGLPLIFVALRVENIELLKLLIEKGADTSVVDKDGKTIFDLAKEQGYDEIAALEK >gi|343387272|ref|AEM22762.1| ankyrin repeat-containing protein, complement(2469783..2471045) [Brachyspira intermedia PWS/A] MTAIALYASSESNNDELNNEDNTLIDPDKETDEYTENEEIKEETKNNNTFNDGNNYKLKNTVTTNEIIMPSEELLKLLEKNKKKTGVAEMIELINDGGINAASKDQLTIGDVTHYTNSTPLMIASSYGHYDIAKALIDNGALINLRTDDGFNALMEAVRTDNIEMAKLLIEHDSDINIKNKDGENMIILACENGNEEMFNLLVENNADINEKSSWGASALIYASEKGNINIMKYLIDNGIDVNGKADENGDTPLLWAVTGKNPYEASKLLIENGANVNATNDGGVAPATILAASTPKVVKLLKDNGADLDTKFLDYYPPIAIAAGEGNLEIVKALVENGADVNYYPNDINYTAIFHAIDQHNYEVAEYLFKNGVDLNIKMKPDNDYGRSIKESYNVLEYAEAIQDKKMINIVSKYYKKKK >gi|343387273|ref|AEM22763.1| ankyrin repeat-containing protein, complement(2471470..2472642) [Brachyspira intermedia PWS/A] MFMKKIIIMALILISIISCNSKKNDNAEVTANTNAVNTNNVETDTKLISVINTNTLESNTKEYEGYATNIYYSASSAEKYSQAIADFNLIKDKASLDEWQSKYTDQTPIKFAIDYYPTEEKAIELISYGADVNQKDFMGLTPLMNASINGYVKLAIELINHNADVNARELDSRGNISADSLFYAVNANNSLELVKVLLNSGANPNIVYSDPEEGNFTILDRSLYYNNFEIFKTLVENGANIDKVNDRGEPFIVDAIRRERFDIVKYLVEKGIDPTMKYTDYRNIPFSLLAATVNNNDTKIAEYLIDKGADVNTKAIIDNYMENDMTSNDKDDSKEAVNLILTAIENGNTSLVKLLIENGADTTVVNKEKKTVFDIAREKGYDDILELENK >gi|343387274|ref|AEM22764.1| ankyrin repeat-containing protein, complement(2472973..2474079) [Brachyspira intermedia PWS/A] MKKIIIMALILISIISCNSKKTDNTEVTTDTNTINTNNAEISNNDEYVEDNNTEEINTDTAEISESGIEISEWDLEAFNELKNVKDAESLKSWEEKNGERSLIMALQYGDKKMVMELLSYGANVNQNYDINSPLKIASAKGDLELVKEFIKRGADVNDKSEGGFDALFSAVMSTNENSLKIMKELLDAGAEVDVGYGYEEITPILFEAIGYVGESRCYLDKFKMLAEYGADINYVDNYGYPLIHYAVNAGCLDIVKYLVEKGIDPAMKYELEEYYPNVNISLLAGTLYNSDTEMAKYLIEQGADVNTPTPSEDGYPLLLQAIDNGKTELVKLLIEKGADTTVVNKEKKTVFDIAREKGYDDILELENK >gi|343387275|ref|AEM22765.1| hypothetical protein, 2474474..2475214 [Brachyspira intermedia PWS/A] MSDDFKNLAATNKESALYKSVISENIDEFKYVIENIENNKEYITYSITNIETWYNYIPNLSTNSFSNFVKVLLDNGMDINESGKNLILDVSKSYDSHRQPKFGSSEIIGVPDSKYKIETLMNLGANINIQDNDGNGILHYILSRDNIGIEEYDIFEMLIKNGININLKNNDGDTALHKISYKKNNGHRDIDMEKKVISLLIENNADKNIKNNNGKKAYPGAFIYNIKLILVKYLMIYYTLFLYFYL >gi|343387276|ref|AEM22766.1| hypothetical protein, complement(2475253..2475366) [Brachyspira intermedia PWS/A] MKKLYHNFSSIKNNNIYNFNQHKNQLSKKSSYIFNKS >gi|343387277|ref|AEM22767.1| hypothetical protein, complement(2475368..2476222) [Brachyspira intermedia PWS/A] MELRSNNKKFNVLNDYFMRYMFAKEGHEHILKNLINSVRIDSNQEPFEYIEVLNTFNLKENVFDKESIADVKAKTKSGETIIIEIQRIGNQSFIYRSLYYWAKNYFTNLKSKDIYSDLTPVISINILDFNLIKGIDKPHSCYFIKELETNHILTNHLEIHFLELKKFNSNNKLCKDLSDWFEFLNSKDKLEDTMEILVKKNPIMKEVYEEYNKFVNSNDLYNGYSNYERDYFNVLMLNEERIKGIEQGIEQEKYSLARNMKNKNMDLNLISELTGLSIEKIEKL >gi|343387278|ref|AEM22768.1| hypothetical protein, 2476344..2477147 [Brachyspira intermedia PWS/A] MNKYASPIYKYKGRVNLIISLISALINLTALLNINNFNLITFNAVYLFSFFSVFMFINSRTVYTNIFKNYKKEIKNKTLFSFVGFVISLILYILITKIVFNKMVVFNYIYAIFPIMNFISIILANIVYFILEKLFINENKHLFNIKCISNILLISFVYTSVFILLYLFYESKYIIILLSISNSLLSSAILSVFNIMSSKFMNPWSRFIFVNAGYIISFILSLIISSIITVIFFTFTIKIFVFTSTIILLSFIISLLLAHYIKAYSYL >gi|343387279|ref|AEM22769.1| hypothetical protein, complement(2477174..2478064) [Brachyspira intermedia PWS/A] MELGSNNNFNVLNDYFVRYLLSDKGSEAILLDFINSIMLDSGMKTFRSVEILTPFNFKENYEDKETIADVKCITQNGTVVIIEIQLQGNSRFPERILYYWASNYNKLLKQGEKYDALTPVISINLLNFNLDDNDFIHSCYMIYDTNNKRLLTDHLQIHIIELKKFKYNTLEYDLNCWLKFFTMKDKDNKEVIMSELVKEKPIMEEVQRRYNNFIKDRLMMNEYDKRQAYLYGNQIMLEEERRLGRVEGKEEGIKEGIEQGIEQEKYSLARNMKNKNMDLNLISELTGLSIEKIEKL >gi|343387280|ref|AEM22770.1| DNA mismatch repair protein MutS, 2478207..2480870 [Brachyspira intermedia PWS/A] MQETFFGSEKEENQKLTPMMRQYKEIKDKYSDSILLFRMGDFYEVFFDDAKVVSDILGLTLTKRANVPMAGVPYHAIDNYLSRLVKSGMKIAICDQMEDPKLAKGIVKREVTQVITPGTISENKYLESKSNNYLASVIVSKSEKNAALSICDISTGELYATEINSNLENHNEALKEIINELTEEIIRFSPKEIMTIESVSESIIIKEIQNKFNNVFYSTTPNYTAEHSYAYKTLTNHFKTVSLKSFGIEEKPLLISLLGSTIFYIQELSKTSLEHISNIKLYNRRDSMTLDYATIASLEILETIRNDNNKMTLFDTIDRTKTSMGARYLKRIIVEPLLNIEEINKRLNNVEFFYKNQKFMYKIRDLLQDIGDIERLASKLALGRINPKELVSLKRFLVGSLEVVTELAMNNFEDVNFEEVNDIKIITDLIERAILEDPKVVINEGDIIKDDYDETLKKYNEARREGRSWIAELEHNYKQDTGINNLKIRYNNVIGYYVEVTKANVSSVPSDFIKRQTLIGSERYTTSKLMEYETIINEANEKSYALEYDIFIEVRNKTNEYLNSILKMARVISIIDVYSSLACLAKEDNYIKPIITDDGIIDIKDGRHPVVEVNLKTESFIPNDTYLDNKNEHMLIITGPNMSGKSTYLRQTALIVLLAQIGSFVPASSAKISIVDRIFTRVGASDNIARGESTFLVEMNETAYILNHCTDKSLVIMDEIGRGTSTYDGLSIAWAIVEYLVHEENKKAKTLFATHYHELTMLEDLEGVKNYKVLVEEYKDEIIFMKKVTEGAAKSSYGIYAAKIAGAPNKVIKRATEILKRLEADASVQVENIELNTQKSKNILPLYEEPKIIEKESEIEKEIKDLNINTITPLDAMNLINKWKNMI >gi|343387281|ref|AEM22771.1| Cupin 2 conserved barrel domain protein, 2480959..2481282 [Brachyspira intermedia PWS/A] MTEQYYYKSTTEREFDCVKDDERLIETLSDKGYTVYAIAQKSNQLIPYHEHPSEEMVIVLSGKVRYIVEEEIVDLEEGDIIRVRPHSVHSMIGISENGISNLLLVFI >gi|343387282|ref|AEM22772.1| deoxycytidine triphosphate deaminase, complement(2481640..2482158) [Brachyspira intermedia PWS/A] MILSGLEIEKNLGKDIIIEPFNRKQLNSNSYNVKLHDKLLVYKDNVLDMKKPNEVDEIIIPKSGYELKPNELYLGRTLEYTNTKKFVPMIEGRSSIGRLGIFIHITAGFGDVGFAGYWTLEIFCIKPIIIYPGVEIAQLYYHTIDGEYEEYTSSKYQNNTDVQPSMLYKDFK >gi|343387283|ref|AEM22773.1| glucose-6-phosphate isomerase, 2482259..2483590 [Brachyspira intermedia PWS/A] MLSINYKNVLGFLQEHELEYLAEHAKYANELLENKKGAGNDFLGWVNLPTEALKMVKEIDELAKEIRENAEVLVSVGIGGSYLGGKAVIESFLNPFSQAKKGNTQVVYAGHNMNGEYFKHLLDYLEGKDFYINVISKSGTTTEPAIAFRMLKEYAEKRYGKDGAAKRIIATTDKAKGALKTLSTENKYRTFVIPDDVGGRYSVLTPVGLIPIAVAGINIEEFVKGFDSMAKITKEMDYKKNPSMLYAMLRNALYNKGFSTEIMVNYIPRMHYVSEWWKQLYGESEGKDKKGIFPASVDFSTDLHSLGQFIQDGKRGLFETVIRVDKEDIDLKMKKEDSDLDGLNYLDGKSLHEINKSALEATVLAHVDGGVPNIIIDLDKITPFTIGELLYFFEKACGISGHILGVNPFDQPGVEAYKKNMFAMLGKKGYEEMGKTLRARLEK >gi|343387284|ref|AEM22774.1| putative methyltransferase type 11, complement(2483673..2484293) [Brachyspira intermedia PWS/A] MKDYEKLSKEHFNKQASIYDKKDTIYYSKYGKISCNYVSEYLKNIDYNKLLDIGSGTGYLINMLKDKEMAEFYGLDLSEEMIKIAKSKKIKNAEFILGSANKLPFDDDTFDIVTCIQSFHHYPYPNEAMREAYRVLKKGGLYILSDTGVGGIAAWIDNHILFKIMKSGDCHTENKEGISKLMIKNGFEVIDKKQIKGFIYSVVGKK >gi|343387285|ref|AEM22775.1| hypothetical protein, 2484507..2485193 [Brachyspira intermedia PWS/A] MKKILILFTIVISFISIVSCSNQSEKQNNNSQQNGQKILKEGEWDINPKQINEVDENIKTIFDNTVKNLLGVKRELMLYIGSQNLNGTNYAFICRSEITYPSALPYYEIIICNVSPSNEISIVKLEKIIESSQSSVGGIVCTSSDEAKINISNSKEANDIIKVFKNAVKDIKDTKYTPELYAASQVVKGINYYFIAHAELNDGTHSIKLLTINNFTESSEVIEVKNIL >gi|343387286|ref|AEM22776.1| hypothetical protein, 2485310..2486986 [Brachyspira intermedia PWS/A] MRNIRYKYLFVILSVVFISTLENLYGQIAVNTYSLEITTNDIEIVKFINGYQLYLKKKPNVYGYRIQLKSQDGFNSYLHIDNSGSTNSIVRIRESDYHYKLGEVFKVFIPQNVYLDRRNNNSPFTLRDNITLVLEAYNINNETLINNEIILKANNAEISTPTITLRNVEKEGDLYAFYLYYSGGDNGEYAFYVREGRTNTSYKLIDTSYGNTGNYDSSGIILEDTFNRSLGKKLYIKAYFKQLPEDRYLSFNVFNTQGESFTYPIDYVIETTNVQKEVVPPQIPNGGNEGPVQIRPRDRVIETSTNTIIVKKDAQPQKENNEIKILSSANIVENPVTEEKPIIEEPEVKENFNYNLEAMDNLNNASKSFNTPNNYVKDQEELSDKFKGIIKRYKDEGSIDLVVVLDTTESMHPYLKTIKRDIRGMVTELFDNHKYSRVGFLLYRDVKDTYLTKKIDFSDNINFINREVNYFYAAGGGDKAEPMYEALQEALETFDYINQKRLIIVITDAPAKVIGRANLDLNLSTAKQKNVTVEFVLASEIEEEEEDLSDDYLYFFNF >gi|343387287|ref|AEM22777.1| PAP2 family protein, complement(2487049..2487639) [Brachyspira intermedia PWS/A] MQIINIFDKTIIEFAHSLHNNYQILDLFFSSITYLGESIPLMVFTIILIFIKRTRVCGINMAVSLFISIFIGAIILKPLIARERPFTDPIYNEYWIAVGKHLETSFSCPSSHTTASFAVLFPIFLYFNKKYSFIAVLIAALIGFSRIYLVVHYPSDVVFGAFIGITVSCLTYFIFKRLNIEYRLNQIPIINKFDNP >gi|343387288|ref|AEM22778.1| 6-phospho-alpha-glucosidase, complement(2488195..2489520) [Brachyspira intermedia PWS/A] MKKHSVVIAGGGSTFTPEIILMLLSEEGRFPLSELKLYDNDAERQAIVGNACAIIMKERAPHVKFSFTTDPKEAFTGVDFVMAHIRVGKYEMRSLDEKIPLKYGCVGQETCGAGGMAYGMRSIGGVLEIIDYMEKYSPNAWMLNYSNPAAIVAEACRRLKPNSKVLNICDMPVGIEDIMASICGLKSRKEMQVRYFGLNHFGWWTSIIEKSTGRDLMPILKEFVSKNGYLHPSMEGHVDADWHSTYEKARDILAVSPNFMPNTYFKYYLFPDYVVSHSDINYTRTDMVRDGREKRVFGECKRITEAGTAKDSTFEVGGHATYIVDLACAISNNTGERMLLIVPNNGSIINFDPTAMVEIPCIVGCNGPEPLVMGEIPRFNKGLMEQQVAVEKLVVDAWIEGSYLKMWQAISMSRTVPSVEVAKKILDELIEANKKYWPELK >gi|343387289|ref|AEM22779.1| PTS system arbutin-like transporter subunit IIC, complement(2489560..2491143) [Brachyspira intermedia PWS/A] MFANIDLRASFQKFGAAMFVPVLLFSFSGLVVGLTIIFKDQAIVGNLANPDGVFYKLVFIIEEGAWTIFRNMPLFFCLGIPIGLSKMAPERAILATLICYLSYNYFIAAILKFWGLQFGVDFTQEAGGVSGLALIAGIKTLDTSIIGAIFIGVIITTIHNRFYETKLPDYLGVFQGTSFVHIIGFFVVLVLAFLTCLIWPKIQALIASMQQFLANAGGAGVFIYTFLERILIPTGLHHFIYGPFIYGPAVVPEGIEPYWIKHVAEFSNMVEPLKQLFPEGGFALHGNSKVFGAPGLALAIYFCANKENRERMAALLIPVTLTSILVGITEPLEFTFLFISPFLFFVHSILAASLATVLYVVGGVVGNYGSGLIAFITQNWIFAMKNHSSMVIANIVIGLIFTGIWFVVFRFLILKFNIPTPGRGDSKTKLYTKKDYKEREAKKSSFEDQAVIYLEALGGRNNIEHVTNCATRLRVTVKDMNLVKDVDAFKKGGAHGLVKKGNAIQIIVGLSVPQVKAKFEELLKTSE >gi|343387290|ref|AEM22780.1| glycoside hydrolase family 4, complement(2491247..2492611) [Brachyspira intermedia PWS/A] MEMIKFVLVGAGSAQFGCDMLGDIFSTKSLEGSHITLLDINPNALKKVYDYVKEFIEANKLNFTVDATTDRKEAFKNAEFIISSIEVGDRFQLWDEDWKIPMQYGIHQVYGENGGPGGVFHSLRIIPPILDIVKDAMDICPNAYIFNFSNPMTAICTAVKRVYPNARFIGMCHEIGWLHKWLPKILRMNYDSLDIKAGGLNHFSCLLEIKDKKSGKDLYPDVLKNAHGYFEHEVGYSDLLKYAKANNAFSKTESFDHSIEEKLKGEFIWADRRLLKVILEKYKLLPITVDSHFGEYIGWAWDVVDHRGILDFYELYRTVLSKAEPKIELRVKERASSIIDGIVTNESYVEEAVNILNDGLIEDLPSWIAVEVPAEISKDGVKGVKLNNVPKGYLSLLRNYVSVYDLTAEAAIHHKKEYAIQAILANPVVNVCKNIEEMVDRMIDSQKPYLDYLK >gi|343387291|ref|AEM22781.1| periplasmic-binding protein/LacI transcriptional regulator, 2492900..2493874 [Brachyspira intermedia PWS/A] MVQKEKVENIAKILNIAETTVKRFFYSPEKLHSDTFREIMSVLAEYYPEDLRSIVKSDYRDILFILRDHNLMVASDIIKYLQKITLKYNISIRLYENSENIPLNILINKNKKKWSDIRGIISLSTETEEITNDFLIPTVFLNMPQQEYGLNIDVNDYLGGKLAIEHLYENNWRNPAFVGHYELSGDIVERYEGVKTACENLNIDCKLFNTYNFSMEESYNITRQILQDKTIDSIFYFCDQMAIGGIKAINEYGYEMGKDIGVIGFDNLEISEFLGLSSMDQKLYEKILYSIEYILFGNGKPFTEKSPLISYTPEVIARKSSLRK >gi|343387292|ref|AEM22782.1| hypothetical protein, complement(2493898..2494497) [Brachyspira intermedia PWS/A] MSSLKMLDKSVCYYKPFVMEVRDNKLFDPEYIKNTTSLKASEIFVSYATNGNISPLHSINAKIDERDITDLIDENNNIYDYMVFESLSLYSPIKENYNFMDLMLDIEKENEIHIIPIVEYDSNVIHSSLEQVELFHTRGFKIPFIIINVKKDVFVSSNVIKYITSQIDPIKVHITEFDNNAGISKINDIKYPNIIKDLF >gi|343387293|ref|AEM22783.1| alpha-amylase 1 (1,4-alpha-D-glucan glucanohydrolase), complement(2494581..2496701) [Brachyspira intermedia PWS/A] MKTINLILGNHNHQPVGNFDFVFENTYKNAYKPFLDILEKYKDIKFNFHYTGCLLEWLEKNHPEHIQALKKLAEEKRIEMQSGGFYEPIMPSIPDKDKDIQIKKLNEYIEKNFNITPQGAWIAERVWEPTLVKNLAMNGIKYIMLDDSQFLTTGIDTKNMFGYFITDNENYKLNIFPISQELRYLIPFRDVEKSIEYLKSIATEEGDRVVVLHDDGEKYGDWPGTQKWVYEDKWLEKFFDALTKEKDTIITTTYSEYMEKHPPISRIYIPTGSYEEMLTWVLPAKVQDEFHSKQEELKKSEDNEIVSRFMRGGFWRNYFSKYSESNRMNKRMIFTSNMIGEITDSNYKEKEEALSYLLKGQCNCPYWHGTFGGLYLNNLRHATYANLIKATSISLEKVYGRKYFLSHSLDFDMDGREEIMISCENAGLVFHTLSGSLIEWDLKKGNPTNLIDCLRRREEAYHIAAVRNSNNNQNNDEHVSIHEIAKKVDDKIAKYLVFDKNEKVFGVDHFLNKMPTAEEFQLLKYEENADFYNLHYDVLENLINKDYATVSFEKTSKVNGKDIHLVKRYIVNNDGKFSVESIIENKSNEDIEFVYALENNITLLAGQEPDRYYIGGNEKVSNNLSDCGEYKGTVFGMADESYIKINVLMEASEETVFLYMPNFTISDAVDKLEMNYQNSTIVCCKNISLKAGEKVKYKVKLDVKYI >gi|343387294|ref|AEM22784.1| hypothetical protein, complement(2497237..2497365) [Brachyspira intermedia PWS/A] MAVKGSPSYNESIKFAAASVSVSDKNLYPFLLNHFLYLYNFL >gi|343387295|ref|AEM22785.1| deoxyguanosinetriphosphate triphosphohydrolase, 2499359..2500390 [Brachyspira intermedia PWS/A] MRTIRLDIETREKGFLSPAAAFSADSKGTVYPREKDDIRTIYMQDRDRIVHSEYFRRLKDKAQVIMLSVGDFRTRLTHTLEVMQIARSIARALRLNEDLTEAIAFGHDLGHSPFGHAGERAISKYFKGFHHSSHSLRVVEHLEKGKGLNLSFEVRDGIIKHTKGKNGKLIADSSGPSTNEGMIVRISDTIAYANHDVDDAIRYGLLKYEDLPKDIVKVLGTTYGERADTMIMGVIEASMEKMEIDIDEKVLKAINDLRAFMFKTVYESKAILEDVERVNRIISTIFEYLLKHKDIIEEDTLFKKADIPYNSDEELVKDYVAHLTDSEAISLHKKITYGKFNYI >gi|343387296|ref|AEM22786.1| hypothetical protein, 2500368..2502344 [Brachyspira intermedia PWS/A] MENLIIYKPKNKEELKKLTDDENINLYNIDTSLIKDMSFLFKESKRKNFEGIENWNTSNVHDMIGMFKDAHYFNNDLNNWDTSNLKKISYMFFNASSFNKYPDKWNLDNIKEAYDVFNNDIDINKLPINLRINLYYEDFDKIKDIDIKDIYKTIITSKNRKIIAFRTKLEKEHYDELKNLIEHREQIEAKNEVKFNSIEEVKDYVNNNYEEYFDKNLKFIKDEYDILTKDKTKKIDIKIIKFIYGNYLKVKDNVMRLKIIDNIIDLIDIESFRNAAYKIFENDRSKIASRIIVGIYGKGNIIKDYAKSIQGKEFYPRSYYIYILALNDGKYALSLIDEMARKSKIESVRNASNSALDVIADRMKINRDELSGLLIPDFSLDKNGERIINIEEKKYKISVNSNMSIDIYDITEKEKILKTIPKTFSSELKSEINFMKKEIKNIVKKEREKILMLLMNGRKLSYDFWKKIYIDNSFLSQYSINLFWNLYDENENFINIFRYLGDGSFIDINDDYITLNENNLISLTSTTEINKDSIIKCINQLSDYEIAQPIKQIQIIDDLKDEFNKYNSITVTVSNIKNFASQFAFKEISEYYEEVNGYEYLDNYSGLSLYIESPFNRNSNYNDEIDIKISIQGKNENNKHLFERFMYGSILILENLIK >gi|343387297|ref|AEM22787.1| putative protein YieJ, 2502486..2502914 [Brachyspira intermedia PWS/A] MVYYTIPHCEDNIKPLCPECIVNGKAAEKFNCDFIDEPFDSDNIIENRDEKIEELTKRTPEYSAWQQPYYPNHCDDFCKFISYVGYKELKERNLLDKIIISSDNDEDSVREYIEDLEIEGNFQGYLFECLKCGQLILHTDCD >gi|343387298|ref|AEM22788.1| amidophosphoribosyltransferase, 2503544..2504959 [Brachyspira intermedia PWS/A] MMNNIYMNDKPREECGVFGIYSKEIKKDILKTLNYALYSLQHRGQESAGITVSNYKHLFTYKSMGLVSDLFSSNIPKDTEGNIAIGHVRYSTTGASKIENAQPLENLFRLGQIAIAHNGNLTNAEELRYELEEGGATFNATSDTEVIIKLIARKTVNNFIEGIKECVNIIKGAFALVIVVDGKLIGVRDPYGIRPLCLGTNANGDYFLASESCALDAVGSKFIRDIEAGEMVIIDEEGVKSFKYAKDQVKHYPCAFEHIYFARPESNIDGINVYNVRFQTGVLLAKKNTIDADIVIGVQDSGTIAALGFAKESGIPYSIGLVKNRYIGRTFIMPEQSSREETVKLKFNPLRHLIDGKRVILIDDSLVRGTTSRILIDIVRKAGAKEVHFRSASPVIKSPCYYGVDISSKKELIGAKLSVEEIRKEINADTLEYLTIEDMLEALQNQNYCIGCFTGEYPTEIPNRPAAEKTC >gi|343387299|ref|AEM22789.1| hypothetical protein, 2505056..2505547 [Brachyspira intermedia PWS/A] MKEVSYKICMNEEELVNALMSDDDVIYIEHKLGNKVSNIKNTGKIAWGVLIGGVLVAATAIVSSKKFGKDKALIASSIATVPSAGIAIIYIGLPSTISLIQIIIQAYKKNDGINGAKDIVFKLRNNYYIAEKDREKLTLKKTADEKVKEVKITEIKEAEKKEN >gi|343387300|ref|AEM22790.1| Phosphoribosylamidoimidazole-succinocarboxamide synthase, complement(2505622..2506338) [Brachyspira intermedia PWS/A] MSKEKKEMMYEGKAKKIYATDNPDEIIVYYKDDATAFNGEKKGSIKDKGVMNNEITTLLFKMLEKNGVKTHFIEKLNEREQLCQKVKIFPLEVIVRNLIAGSMAKRLGIEEGTVPPNTIFEICYKNDEYGDPLINDHHAVALKLATYDELKYIYEVTAKVNNLLKDALDKIGITLVDFKVEFGKNAKGEILLADEITPDTCRFWDKETGKKLDKDRFRRDLGSIEEAYIEVLNRLNNL >gi|343387301|ref|AEM22791.1| phosphoribosylaminoimidazole carboxylase catalytic subunit, complement(2506408..2506896) [Brachyspira intermedia PWS/A] MKVAIIFGSRSDTDKMKGAASCLKEFGIEYKAFVLSAHRVPEHLEKTIKNIEENNYEVIIAGAGLAAHLPGVIASKTILPVIGVPISASNLDGMDALLSIVQMPKPITVATVGINNSYNAGMLAVEMLALKYNDIKNKLIEYRKKMKEDFIADNEKPIEFDI >gi|343387302|ref|AEM22792.1| putative ATPase, 2507172..2508065 [Brachyspira intermedia PWS/A] MPDCSIAYHINAIRRIDENSELKNLFYNFDYRNNDIEFNYNFDNINHNLMITPILKKDISFDNKTDDINELEYKLNIEFEDKKKEEYKYIFRNTSIRKTIRRIGEKEYLNNIKELYLHNVVECIDLLDSLANIVKNKDEELLINLISFFNKNIKSIKIIKNDIYLDIEGINELVLLNLMGDGLKKYLSIIIPMVVNQYNMILVDEIENGLHHKSIKHLLRSILNLSKNNSNIQIFFTTHSYEVLKFLSEIADKEFNDMKDMINIINIVNTENKGFQSYNYDIDGVKELLENDSDIRY >gi|343387303|ref|AEM22793.1| hypothetical protein, 2508069..2508584 [Brachyspira intermedia PWS/A] MDNNKKYIILVEGKADKKFIKDYIKYQYQIDTDINDNIIIEENGGKSFNKNNINNIQKYIDDDYELAVIFDADNNFEEAKNNIKTNLNIDDNNIFLFPNNNSLGTLEDILSNIAVIKDIINCFDKYTNCIDSIPETITPAKKSKIYAYLESIKSYDKKTITEDKRDYTENF >gi|343387304|ref|AEM22794.1| conserved hypothetical protein, complement(2508927..2509091) [Brachyspira intermedia PWS/A] MLPFNPPFMYKCNSCGKFFSSKKRPSVLNLFGFGAKCPKCGSKDTKSMDHIIKK >gi|343387305|ref|AEM22795.1| conserved hypothetical protein, complement(2509247..2510452) [Brachyspira intermedia PWS/A] MENIMNDKIVKMRIGFSSIVIFRDILKNKVIKKLIKFLEAYDDDNKNNEIKLIDYYSDFLYELFKYNNNIADYLLSYIFKDDNIYINKYIKKDNLDYNLEESLKNELNFFEFLSSFDFNTLFSEEYSNQISKLDCDEINFYELYKKHIEEMPNKGHGIFYENNMFTLDDKKNIIPAKHQDMQDIKHLYGYERERSKVIANTKSLLEGKKANNILLYGDAGTGKSSTIKAIANMFKDDGLRLIEVKKSQLSFITDIIEDLSFSPLKFIIFIDDLTFSSNDDTFSYLKAILEGGVNSFPSNVVVYVTSNYRHLIKENFQDRTGDDIHIEDTIQQIMSLTNRFGIIITFQRPDKDLFIDIVLSYAEINNIEMDKEELIKQAESYAIRSAGRSPRVARQFIESLL >gi|343387306|ref|AEM22796.1| methyl-accepting chemotaxis protein McpB, 2510830..2512293 [Brachyspira intermedia PWS/A] MATANQKYEQAYNDCIGISGGTKPTPLNYDRGLYWSLYLGSGTKPYQDGQTKSYADVMKELNFSQDMFDLLALSKSRSEELVKLEVQAMDIIKSIPRNADGTIPDEYKGRQLEAIELVNGDEYERRVSEIMTPISQFFDKLESDNAIKLRAAAYEVRNDTILFFIGLLLVGSSVVVFLASLGKTIGKNLRLCVELASEISNGNLTAEIDERLCKGNGEFASLLKSFRDMISHLREIISRVLQSSKEISEAATEIAQGNTDLSTRTEMQASHLEETASSMEQIASTIKSSADNSVRGNQMMQDSEKSVQEAGEIIEATTNNIELVFEASNKITDITKIIENIAFQTNILALNAAVEAARAGEQGKGFAVVASEVRNLAQTSQSSVKDITSLIADANEKIKTATETARKSKEIFMDIEQKIEDTSRIMQDISAMAVEQQAGVDQVNIAVSQMDQSTQQNAALVEQATASSEGLMGQAKELVDLMHFFKV >gi|343387307|ref|AEM22797.1| glycyl-tRNA synthetase alpha subunit, 2512463..2513335 [Brachyspira intermedia PWS/A] MTFTDLIMTLNKFWSENGCIIQQGYDLEVGAGTFNPATALRALGPEPFSVAYVEPSRRPTDGRYGENPNRLQHYYQYQVIMKPSPENIQDLYIQSLEALGISFKDHDIRFVHDDWESPTLGAWGLGWEVWLDGMEITQFTYFQAVGGINLKPITGEITYGLERICMYLQNIDNVYDLEWGHGIKYGDVHLQGEKEFSKYNFEVADTDMYFRHFKEYEEECDRCLANGCVLPAYDMVMKSSHVFNMLDARNAISVTERAGYIARVRELMKKVSAAYIESREKLGYPLIKNK >gi|343387308|ref|AEM22798.1| hypothetical protein, 2513802..2514152 [Brachyspira intermedia PWS/A] MPSFANPFNANVNRKVTKEELIQAVRLDIAGELEAIYLYDAHVMATDDPVAKAVLADIRDEEKAHVGELMALLRHLDPKEAEHFESGQLEVKEMMEELGIKEPDLSGLTVGSLKKD >gi|343387309|ref|AEM22799.1| Linocin M18 bacteriocin protein, 2514186..2514995 [Brachyspira intermedia PWS/A] MDYLARESSPFEESFWQNIDKVVVETASRTLIGRRFLSIYGPLGAGAISVQYDKSDREEVFEDGFVKTSGRKSVELPQIYQDFTLLWRDLENNISNKLPLDLSIVSQAAQTLANKEDNLIFNGNDFLELKGILNAEGVQKLKISDWGQGENPYTDIVKAINMIREKGIVGRFVLCLSQSLYFDLQRIQQGTGMTEAQRISSMIGNLYNVPVIKGKKAALICAEPQYMDLAVGIDMSTAYLEQKDLNHSFRIMETIIPRIKDSNAIVVLE >gi|343387310|ref|AEM22800.1| hypothetical protein, 2515175..2516326 [Brachyspira intermedia PWS/A] MSYHCECEQCKNKEFNPEDYIIKEEDFKVLDKERPLGISGHLRVKDEAMSIAECIDSCIDALDELIITYNKSTDDTEEILKDYEKKYPDKIRLYYYAPNIIGYNENEYKTKYSEIHYFYHYSNFGYLKIKYRYYIKIDADQIYFTEKLLDIREALLSDINASETINKLLTIDKISWYIPIKKLRNNFRTYYIKKLFNIKDKYYNFNCPEYFLSLKDFIIYSKMKYTDNFYLLISGFELGLNNDSLCLNTSFVYNGATGDHFIFVPTQNYTYYLNSVGLESIHLPHNCSVLGLSWVHLGLIKRSINIDSEIKFMDIHKMNNEDILKYIENNLEKKEYQTLLSDLTIKYFDNDKQYLNKEFYDKYLKKTLEYVIKNRDQFIKRLW >gi|343387311|ref|AEM22801.1| hypothetical protein, complement(2516330..2517313) [Brachyspira intermedia PWS/A] MGSKNRFLLRELKKWNKDNIITDEQFETLSKRYRDDYIDWQPIIKAIMITGIIMVSIGFIAFISFYIFSLYFIVFLFALLFLSGFIIDEVFKRKDIYLPKTSSAIIAISSIFLSAFIFTLSYIITHNKDNFILLSLISIILFFIIAYIKRNYAVLSIAIIGLITWYGFEGFDISGIDLTLNNYIRFIITSVLMFLIGITDINKKLGERYSNFTIIYYTVGILYLNIILAIMSIFGNNLEPIIFEYGSSELLIYSLLFLFIDIIIFIIGYKLKISSIVRYSIFFVILNIYIRYFEYFYLRMNTWIFFIILGLSTILIGVIIERIIKYR >gi|343387312|ref|AEM22802.1| hypothetical protein, complement(2517319..2517639) [Brachyspira intermedia PWS/A] MSSKDLQLIANKLNELISYLENNDLDNFFKHKDEFCDLIILENSDSFNDNIKSDIENIVPANLMNTFMNFIKYIRALRTMKHNDNDYTRYTLDNIKFIKTQIFKDY >gi|343387313|ref|AEM22803.1| hypothetical protein, 2517933..2518364 [Brachyspira intermedia PWS/A] MTKKLFALLITLTIISTSNAFADWVVPASSLPQNARSFIQQIYPNTQIWKVERDDGKFEVKLSNGVKIDFLYNGDWNSIEGEYNAVPFNALPVNIANTIRNTYPQAAVIDVEKEWGNYKVKLNNFMELFITSDGQLMGQKFDD >gi|343387314|ref|AEM22804.1| ATP-dependent DNA helicase, complement(2518728..2520725) [Brachyspira intermedia PWS/A] MALMLNEEQRQAVEHIDGPLLALAGAGSGKTRVITERIAYLIKHGVLPSQILAVTFTNKAAAEMRERITKLLKEKPKQLVVSTFHSFCVRVLKGDIEKLGYKNNFSIYSSSDSKTLIRNILREIKVNTLNYDEGLFAWYIDRFKNNLMKPYEVEPHDDLEKIAKRVYEVYQSYLKGYNAVDFNDLINLTIDLYVEFPEVLDKYQERFRYIMVDEYQDTNFAQYKLTTLLASKYRNIAVVGDDDQSIYAFRGADVSNILSFENEYPDAKIVTLTKNYRSTKAILEAAHSVISNNTQRKDKKVVAEGEEGIPPTIMPCEDEREEAQFVADSIINYSISKRLNYEDFAVLFRMNAQSRLFEEAFRLRGLPYTVVGAFQFYERKEIKDILAYLNLFVNPEDEVSLLRVINIPKRGIGAVAINNLNEASIKNGVSLYHTLLNYESMDEISPKAKAGIKDFLEVIEHYHNLFTVDKNDLERPKLYENINKFLDVIAYHNEILNSSDTKEQGAKKMENVESLMNGILEYEKSNKNATLKNYLDRILLMSIEEQNDDEDKKKGIMLMSIHAAKGLEFPYVYICGMEDGIMPHQKSLDENGLEEERRLCYVAMTRAKKHLTLTYCRSRTKMGRKVECTPSVFLEEMSENLPEEMAMNEEEFFSNLKASLRPENK >gi|343387315|ref|AEM22805.1| hypothetical protein, 2520940..2521359 [Brachyspira intermedia PWS/A] MEVNMKKTISILFLCFIFICVIGCYNYDVTGVEIENDGNENTEDNGNNEVDKKSKVFLHYYGNLYVIKTPTMIIISPNDNLYFYDGNRKMNIQNIQKISDNEYNFFIEYYYNGNIKIYDRYLHFNIGSGVLTYNIDEII >gi|343387316|ref|AEM22806.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, 2521565..2522632 [Brachyspira intermedia PWS/A] MNIDNINDIRKKVKTVKIGNVLIGGNNPISIQSMTNTDTRNIKETVNQIKSLEDAGVDIVRLAVLDMDAAKAIKEIKNQTKVPLIADIHFDYRLALESMKSGIDSLRLNPGNIKDKEKVKEVIKEAKERNLTIRVGVNGGSLDRSIYKEVTPENMVKSAADHIKLMEDLDFTNIKVSLKSSDIKTTIEANTLFREKFDYPIHLGVTEAGTLRSSLIKSTSALSYLIMQGIGDTIRYSITGDPVEEVMAGKMLLKFLGIRNEPSIEIISCPTCGRCQVNVEEVASFIEKHVQNIKKNITIAIMGCVVNGPGEARHADFGVAGTGDGNFIFFEKENEPIKVAKDNIINFLTKKIEEF >gi|343387317|ref|AEM22807.1| hypothetical protein, complement(2522701..2522814) [Brachyspira intermedia PWS/A] MPFSLLFTCIYSNMLADNVYIYSIAFEEYLIDSFNFI >gi|343387318|ref|AEM22808.1| hypothetical protein, 2522858..2523184 [Brachyspira intermedia PWS/A] MIVEYFELEISKLKYILYSKKINYHNIINYKIKCFYNNIQNYISKNNDKMIYYDYKLYFIPFLIFDNFKHGKITEKEHNELLKSYRKLYKSFKKKQKEKKNIIILDIK >gi|343387319|ref|AEM22809.1| hypothetical protein, 2523847..2525109 [Brachyspira intermedia PWS/A] MMIFIASCQKTPTTPDTVPISLQNFTEWLNAIKVTDFTAQTVNNSLTLTSEKEMTAETALTSIKTALSALSKENIVINNIDSLTWQEEVTSDKEGIIKVSVSPAEGMKFADDLTASLANNEFTITVKPLVSEEDISIDGPGKSADMPLDISLYTGTDYAKEAPFTIKTGTGVFIHDITHSPLKWVVGIQDIWNVSNLEIFKPYISKYDTALYIDYLETFKILEDVNIKLKTSQIYKLTLTISYSKDNNTLTKNIDLYVNLKKDHQIVNDKAIIKAFIEGISGQTYTGSEETINIMINDNVTFNMVGLLPYLAESSSVNKLKFFDVSYGKKGSISYINSIATGLNRQDVIQRLKTKLLEIGINWSGSSFNFYIAESVFAISAIEPMTVSDSSFVFRTSSYSAIDITKGIDITLMIPEGWVE >gi|343387320|ref|AEM22810.1| hypothetical protein, complement(2525323..2525451) [Brachyspira intermedia PWS/A] MIGELSIIALIVRRRYLSIEERSEVLGYIFKTIIKNNIMTNR >gi|343387321|ref|AEM22811.1| hypothetical protein, 2525453..2526379 [Brachyspira intermedia PWS/A] MHIKIKNPDSIIDGKISSIKGHYKYDSINIPIQLEGNIDKKSMTIKTPNNEIFAFNFHEKQLYDIINSKSEIYFNLNGKWRNRDKSAKCIIKSIKFVHSIYEIYIEKEYKKNSGSMGAIYIENKSFAIYKGTSTNITLNQLISEINNNLDENLKTNNYTNNLNYTEFAVLSDYFDDKILSIKNYSDGYYGENGIVYKSYVTILTINSLVKIHNYLGNLVYDTKDFRTFLKNKIKKQNSNYDNDNFGEYFDEYITSLNYAEIYFNTDASVTVHFFFGKEKLEYSFININIEELKPYIKPDSFYSYLFYK >gi|343387322|ref|AEM22812.1| conserved hypothetical protein, 2526551..2527261 [Brachyspira intermedia PWS/A] MVAVLFYIIYMLMYNTRAYSIAVGFIILFFITLIAKVFGLSTLSWIFDQFFQVGLIAIVVIFQAEIKHALRILGGKAFLKKSFRYDEDQIQKILSATFNLSYKGYGALIVFQRNISLHSLVDRAVKLNADISIELVEAIFFKNNPIHDGAAIIMENRIAAASAYLPLTEIEPQIKNRRLGTRHRAALGISEQTDAVVVVVSEETQCVSIVHNGILEYNLNREELDKRLGELLEIKK >gi|343387323|ref|AEM22813.1| hypothetical protein, 2527357..2528331 [Brachyspira intermedia PWS/A] MSFLLFLFVRYQKEYTKDYVTKIDIKNIPSRLLIANDIPENITITLKGFKDNIYELPTEFSAYIDLTNASIGSNIYNVNLAGDIDYSKMNITVNPSEIPIILDELSYKTVPIKVPTVGIAAYGLTVDKIIINPSNTIISGPKTLISSIDEIKTFNVDITDKYMDYSSISRIHLPRNIKSDVSRVNVNIIFDKDLDRVEFNDLAINIDNLNGKFKINDHNPLIINKIVLEANKIMLANLSPDDIKLYIDLQEMTNVGMYSNVSVEANIPVHTRLIEIEPSFFDIEIIERDVTDTNNINYTNNNIATNEENINNETITNENSVTNE >gi|343387324|ref|AEM22814.1| hypothetical protein, 2528348..2528710 [Brachyspira intermedia PWS/A] MKRLRYGDVLIFLFIIIFSFFYAKNLISNKSSKIIIDTYDKSFRYDLNTDREITVTGLLGESKILISNQQIMFESSPCRDKLCIKAGALKNSPIICMPNGISIRFEKNMENDIEIDSVVQ >gi|343387325|ref|AEM22815.1| hypothetical protein, 2528719..2529261 [Brachyspira intermedia PWS/A] MLFLENIKSHTGKRRIYDIIFFAFLSSFIAAVENMFPRPIPYFRIGFSFVIVLMVVDVFTFKELLLLIFIKNVSVALAFAYILTPPFYLGLCGGITSIIVMKLMSYFKNTFSVFGVSLAGALISNLSQAFLSKYLFKLPDIRFLIVPVFILSLITGSIVGIITMVLCSDNYKKGLNNQQN >gi|343387326|ref|AEM22816.1| hypothetical protein, complement(2529307..2530122) [Brachyspira intermedia PWS/A] MFLFPLFALSCNNGALKPDVYSKESIDKKYPYWQVGIENFEVDSRLNKRTVITVEEKKYILVCMALMRLAVNTDEFAERVKASEGSLKSSVGDSYGGHTLQYGEQYNTQKLIDSVRSLKYNFIYRKMNVAVGTGTGEQGKSRYLRYGLQNENDIPTGKWIGLTTGNWGSLNDVLFGDYFTYKQSETYANVAGLMFHEHMHNIGFNHFGDYNVPAALQGVVTQILHEMLWKPIEGPALKNKYSKQLDELIAYYLTEYKHLLNEDTIFEPSAK >gi|343387327|ref|AEM22817.1| hypothetical protein, complement(2530174..2530950) [Brachyspira intermedia PWS/A] MRKLFLFYLFLFSLFILSCNNNALKPDDYSKESINKKYPYWQVSVSRFQISQNEKTYTTITVEEKRYILRGMALLRIVVNSEEFSGAVRSKKDELISGVSDSYNGKTLNVGDKYDPDRVTEIIRTVKYDFIYEKTSANQAGGVGTVGNSRYLRYGIQPEDQIFIGDWVGFVNANWLLWSYNNIGNFAPLMFHEHMHNIGFGHPGAYVLDDIVRQLGYRILSGDLKDKYARQLDELTAYYYTEYKDLLLEDTIFDPSLK >gi|343387328|ref|AEM22818.1| hypothetical protein, complement(2530971..2531768) [Brachyspira intermedia PWS/A] MLKINKEKIMKKLLNIFIIMFLSCFTLFAKSGLEIGVFVPLGLSIGINQYSLTNKNPTQQQENDLKSAIKQSDRKSGVGFDAGFLVHIGYRFDINKDFSISVLGELGYNHDEFSFYRISTDKKNENVYAYTFESMSFGIYPKFNWKKFSFGLNVGIKVPLFARAMSASINYDTKNMNKNIEDFNAFQIKNLFEVPIIPYLRFSVDYEVYSDKKFGLVLGGYIGGDFGMSFKNAMLNNQSIAKITRQTISSFDIGFQVGVRILPYN >gi|343387329|ref|AEM22819.1| hypothetical protein, complement(2531771..2532535) [Brachyspira intermedia PWS/A] MLFVLSYSVFAKSGLELGVFVPLGFNIGIHYYDKAPSGLDNQQAAAYNSYVTNNTRTSHIGYDAGALFQAGYRLELNKEISFSFMGELGYSRDTFNYRLKDSSNTGSQVLKFQNYRYYTFDSLVIGILPKVNYKRFSFGIGVGMKIFLSGTINNSSYNPTLGYTTETIKMLDTKNYKDYFTSNVMGYLKLTLDYSVYTSRNFDIVVGAYIDYDFGLRYQIKGSKINNNQLDAPIENIASVDFGIQVGTKIRPMN >gi|343387330|ref|AEM22820.1| hypothetical protein, 2532725..2533669 [Brachyspira intermedia PWS/A] MDIFFEEYININGIEQYFIHYPKKSNTTLLFLHGGPGESESYFLYKMHSKTQNYNLVYYDQRGTGKTQAKNKSKDKDITIEKLLIDLKETINYVKLKYNSKYIILLGHSWGSVLGIEFIKKFPNLVSAYIGMGQVVNFKIGEKTGFDYCYNIVQKSNNQKYIKKIEKLKNYPFIINKNNVFEIFKNFREIQVKYKLAGYYEGNDKLNKIIKQSPIYSFKDMFNSNSLILNQNIIYYLIDYDTTKFTNFNIPMFFICGANDWQVPTVVVKEYYKNIIAPDKDLFIVENAGHLLNIENTKDYNIIVEGICSRVSGI >gi|343387331|ref|AEM22821.1| TPR domain-containing protein, complement(2533697..2535286) [Brachyspira intermedia PWS/A] MEEEHNFIKTEENYEPAIEKSSSNGVMLTIIFLVLLIAGICYWIYNSNTYSRSYSYKNNIQTNTQLSNKNDILNRNNIKKNLDYLLEIKYKEYIAPHVNSFNSIIDNSGLLNVDTRTIAIIFAGTVFTIIASMFLFRGNNSEALENADSDVRFFDKDNKDSGNGNEDNKNESINKLDTSGIINSLDDDKNIIDTNNDGDKLVLKNNYYKYNKNADNVYWNVIKKNKNDENLNINELSLMALREVENGNDDNAINIYTKILSFDDDNIAVLKSRALLFNKKYEETSEDKYFDAALKDYNKIIDINSFNGYSNTDTLKDRSVLYTKKYHYTSNENYFNLALNDYNKVVNDNNDKDDLSTLLIYSDLYNEKYKNTRDKKYFKMSLDNYNKALAIDNNNTSIYINRGWLYLTDYKICNDIESLDNAEKDIKHGLNLEKDNFYLLNNSGITSLYKYKLEKQVKDLKESEYSFLKSIKNNKSNSVLAESYYYLSLVYDEYAKLTTITAEKMKEYTEKSKHYFEESRKLGYSAVSK >gi|343387332|ref|AEM22822.1| ankyrin repeat-containing protein, complement(2535369..2536148) [Brachyspira intermedia PWS/A] MKIYLILIFIIFNSFLYSEYISSANKYDINKDEDKIFIYVQQNDYKGVKELLDNGIDPNMLDSDKISPLMIASFNGFKDIVDLLIKNNADVNIVNNFGYSALMASAAGGHYDIFNILLENAANINQVNNDGNNVLIEACFSKSTDIVKKILELDTININHQNNMGYTALIQAVINGYEDVVNILLDNNADINIASNDGKSSLMFAIIRENTNIIDILLKYKPNINFEDNDSNTALDYAYDTGNEKIINMIKEYYENNKI >gi|343387333|ref|AEM22823.1| hypothetical protein, 2536253..2536645 [Brachyspira intermedia PWS/A] MNTAIFEIIMFSPILIAISLIILLFFILLYYFIKIINALFMKFFHIDKKLIDKVHIISFVSINILISAYFLINLLYKINTYGTDLNTFMDKDNQVYLGNIIFTFSLILESIIISIICIFLNKFKLFRNGF >gi|343387334|ref|AEM22824.1| ankyrin repeat-containing protein, complement(2536625..2537200) [Brachyspira intermedia PWS/A] MSDIVEYVKNNDIDNVKKCLASDNTLVDARDEESKFTLLMICAKKGYFDIAKLLVEEGANLNARSRTGITALMFACAEKQVKIAEYLIDSGADVNLRDKPLFSALLYACLTKEYNIIKALVEAGADVNVKNFKLVTPLMFSAGVNDIETMKLLIENGADIEHKNKDGERALEFAIRKEQKEAADYLKTVSK >gi|343387335|ref|AEM22825.1| ABC-type transport system involved in multi-copper enzyme maturation, permease component, complement(2537232..2537939) [Brachyspira intermedia PWS/A] MRNIYVVFSREIQSFYVSPLYYILGFIYLALTGYFFTIEIYYSRLAVMENTMYNIGFFTILFLSILCMKLIAEERASGTFELIMTAPITSLQYVIGKYLSVLVVYISLLAMTFVYPILLMVFGKPDIGVIFSGYLGLFLLGTAILGLGLIATSISKSQLVAAILGVSMGIFAYIINWLSEMFTGASKILNAISITTYFSDFTKGMIDIQNVIFFLIWAVACISISTMFVESYKWQ >gi|343387336|ref|AEM22826.1| ABC-type multidrug transport system, ATPase component, complement(2537982..2538977) [Brachyspira intermedia PWS/A] MIKVDNIVKYYGEHIALKGVSYTINKGEIVGFLGPNGAGKSTMMRIITGYLPATSGYVYLDDYEVYDNPIEIKKRIGYMPENVSLYTEMTVIDYLRFCAKLKGIPRKHIKTALENTIEITGLTKYRNRIIGHLSKGYKQRTGIAQAIIHDPEVLILDEPTSGLDPNQLIEVRSLIKSLGGTRTVILSTHILSEVEDTCERALIIDSGELIAEDTIEGLKMAMDREILGGNIELKVAGRYNDALLCVREVNGVVQAELNSYGDILIECERGNDSRAQIVKHLVNNNFDVLEIRAKERSLEEVFIYFTDKKKNEDFDKSKYIRDAILSAENNE >gi|343387337|ref|AEM22827.1| hypothetical protein, complement(2539228..2539920) [Brachyspira intermedia PWS/A] MFAFSLSSVFAQDTTTTTTTDTGTTGNKPREQLAQNFVDALAAQDEKLLISAIEGGSPQVKAMCFKALSEKGASSENLLEAINRYVSYGLNAPSSQNSDSMVRYQALQAAKAAKSETSVEYISQMLYSEQETSNIIAAAQALGEIGSNKGVAALLFQLRLAKTQAIVYEVVVALGKIGDQAALSDLIDLAQNEQYFIVVRQAAVDAIKNIKPSSDGGNNNTTTTTDTAAQ >gi|343387338|ref|AEM22828.1| dihydroxyacetone kinase, DhaK subunit, 2540224..2541219 [Brachyspira intermedia PWS/A] MKKIINDVSNIILEELQGMEKAYSNILKVNYDPIYVTRASKNSKVSLVSGGGSGHEPLHAGFVGYGMLDAACPGEIFTSPTPDQMEEAAKSINNDKGVLFLVKNYTGDVMNFQMAEDLCKADGIDARSIIIDDDVSVKNSLYTTGRRGVGATVFFEKICGASAEKGDNLDKVLEYANFCKENARSMGMALTSCTVPAVGKPTFDISDSEIEMGIGIHGEPGRERTNIKKSSEIAEIMMEAICSDIPYKNGDEVICMVNGMGATPLMELYILYNDVAKIADKKGIKIIRNLIGNYVTSIDMAGASISLMKVNDDILKLWDYPVHTAALRWGI >gi|343387339|ref|AEM22829.1| dihydroxyacetone kinase, L subunit, 2541504..2542115 [Brachyspira intermedia PWS/A] MCNNTKIKEWLINLSLVYDENKDYLTQLDADIGDADHGINMSRGFGFVRDALKDNDSAISAIFKQTATLLIKNVGGASGPLYGTFFLNASIVSTNKEELTLKDITEIFNKGTNAIAALGKSKEGEKTMLDTLFPALNAMKENNESIEDFKSKVLISAENGMKSTIDMIATKGRASYLAERSAGHQDPGATSSFMMIKELINIL >gi|343387340|ref|AEM22830.1| fused predicted dihydroxyacetone-specific PTS enzymes: HPr component/EI component, 2542139..2543584 [Brachyspira intermedia PWS/A] MVSLIFVSHSYKLAKIAAEYIKEVTNINNVDISFSGGTGDDHKEIGTDAVDVFNAIERVYSDDGVIIFCDLGSALISSELAISMLDEEKSANVRITSAPFIEGGINAAIQSSLGKNIDEVINESLESLTPKISYVKDKVDYNINNDALDDIEFKDYVKGEYKILLENGFHARPVFMFINLIANSKSEVYISNKTKHKPPVSADSITKVTLLNIEYGDVMEIYAKGPDADQVLERFEYLVNGKFETKKKTLQQKNIDNNAIVVSDGHVSGKATYMYFGINVKKEYIKDTEAEKNKFNQSIENVKKDLLEQKTIIEEKNLQNNEYLIFETYISMLFDDYVLKEVYDLIDNKKYSAAYSYNKVMRNIFKSFDSLDDGYIKERKYDIEDILHQVLKYLLDIKINMPEEDDVILIVDNIYASIVTEIGQNIKGVISINGSAVSHAAILLKSLNIPYVIYDSAMQLKGKDIVIDTKNEEGKIIYLKK >gi|343387341|ref|AEM22831.1| hypothetical protein, complement(2543565..2543687) [Brachyspira intermedia PWS/A] MMIVLKFIVFSKFYIKLYTHDMFIKQYKIIIVKAIIFLNK >gi|343387342|ref|AEM22832.1| Ankyrin, 2543665..2544138 [Brachyspira intermedia PWS/A] MNFNTIIIVVIVAIVILWPIMKKITKNIKIESSENIHIACLYGDLSKIKRLIASGVNINSKDFSNKTPLMYAAEDGAIETIEYLIKNGANVNDIDVRGDTALIIAVKNNNIKASQMLIENGADLRIRNEDNKDALNIAQDLGCKEIAEFIENKREDI >gi|343387343|ref|AEM22833.1| hypothetical protein, complement(2544170..2544409) [Brachyspira intermedia PWS/A] MAHNIIDGYRKIEGNYPTYREYLIHFYCKDCSNFWAVDDKEINISEDDDISQIDDIIEDSVSHCPICGSTNITRSNNNN >gi|343387344|ref|AEM22834.1| hypothetical protein, 2544632..2545069 [Brachyspira intermedia PWS/A] MTKKLKLFISVASLMMLSSLILTAEDMPIQANQLPQNAQTFVKTNFPNDQIVYAEQDRQSYKVELASGVEIDFDKQGNWTDVSGNNRPIPTKFIPTAVLKSVQAKYPQIEVLEISKEYNSYKLKLANNREVYVSNNGQITGDKLD >gi|343387345|ref|AEM22835.1| conserved hypothetical protein, 2545282..2545719 [Brachyspira intermedia PWS/A] MRKHFKQIILVASIMMLSVVSAFAADMAIQANQLPKKAQDFVKANFTNDKIVYAEQDRQSYKVELASGVEIDFDKQGNWTDVSGNNQPINTKFIPSNIMKTVEAKYPQVPVLEISKEYLSYKLKLGNNREVYVDNNGKIVGDKLD >gi|343387346|ref|AEM22836.1| hypothetical protein, complement(2545781..2547535) [Brachyspira intermedia PWS/A] MDLFMKNIKLKNNSFYLISLLVIVLLYYSITQLLFPMFSVMKVNFSIIDILYIYLFSIISYILSDKNNYISYFFIIVAVFSFFAIEPLGITIEAKPLFFTDMPDLYPSLIEVLPLYMKIITISATTLYFGLLFAYALYFIYRLVKMYSVNVKKAVIMTLIVAAVTYISFFRNVKMDSIYVDYINIANKYGIINTISYRISYDKFMKVNSDIESVQEAVNILKEAQSKRDISHLMLSYDCDKKRDVFIIFLESFYDYEHFLPLMDKDPFPEEYREWASNSTKVGPNDGYGSLFARTSGLTGTSPIFPKKQKTPIYTALPYLMKENGYHTIALEESDVTYYLDALFPNIGIDEVIFKLGLTNIKNYINTHDFDKPIFVTGFTFMGHAGSHVENDLDVYENNKSFMEKIDKRDIPVLVETMENSALTAKDIIDTKNIILEKYPDALIIFKHDHLYPYLKTIIHNSNIDDSIKECFFNSYDISPLLIWNGTNGYYKFEENGFPPENIPMFVAVNTCANYTNSIISLLYKDKTDGIIRFYNAFYTNDNGKLIRIEIDRNSLSYKENNAQRILSQDLFRGKKYFYQCINN >gi|343387347|ref|AEM22837.1| metal-dependent amidase/aminoacylase/carboxypeptidase, complement(2547627..2548853) [Brachyspira intermedia PWS/A] MKELDLIKNKIKIIKKELINIRRDIHSHPELSNEEFRTMDIVSKYLTFHSIKHRTKVAGTGVIADIEGIDKSFTVAFRADIDALPIEDLKYCDYSSKNKGVCHACGHDVHTAINMGIANIFSNNNENKEKIVPPCNVRLIFQPAEETTGGALRMIKENALENVNVIYGLHVSSNADIGYIQINDNIVNASCLDFIIKVYGKSSHGANPAGGVDAIVIASKIINDLQTVISRNIAAEDSAVITIGTINGGTATNIICDYVEITGTIRALKESIMDKVKSRIKKIIKFTANSFDGDAEFIETVYFASLVNWKDASSIIRENAFEFLGENKILELNPSLGAEDFSFFVQNKPGAFFYVGSRNEKKGITHKAHNGLFDVDENCIEIGLMLQIMNLYKSYSKKDLFYIGKERN >gi|343387348|ref|AEM22838.1| putative haloacid dehalogenase-like hydrolase, complement(2548890..2549693) [Brachyspira intermedia PWS/A] MNISKEQIKLIATDLDGTLLNNNKEITEYNINILKKLIKNYNVQLILSSGRPYEGVKSYNKILENNNYSIIFNGASIVDNSGKVIYKQTVEENNAKTIIKLSEKYDVCVHVYDNGKYIVSKEDFPIKSYVQKEQTIDPIIGLENIETYRFDKMLILGKRDILNELYKEILENTDVHSSFSGDLSLEITSKIGNKGKSLEWICNNKGISPDNIIAFGDNYNDIEMIEYAGIGVAMANAEEELKQKADYIALSNKEDGVGKFLSSIFSI >gi|343387349|ref|AEM22839.1| putative haloacid dehalogenase-like hydrolase, complement(2549697..2550512) [Brachyspira intermedia PWS/A] MDISDISKDKIKLIATDLDCTLLNDKKEIGSHTVEILNKLMNDYKIELILSSGRPYEGVKNYNKLLKNNNYSIIFNGACIADKEGKIIYRKTIEENISESIIKLSEKYNVCIHIYDNGKYIVSKEDFPIKSYVQKEQSLPAVYGLNNIRTYIIDKMLILGERDILNKLQAEIDSQFNVHSCFSGPLSLEITANGANKGNALKWVCDNKGISYNNIIAFGDNLNDIEMIEYAGIGVAMANAEEKLKQKADYIALSNEEDGVGNFLKNIFKLG >gi|343387350|ref|AEM22840.1| phosphoribosylformylglycinamidine synthase, complement(2550691..2554437) [Brachyspira intermedia PWS/A] MNYRIFIEKKDGFNLEAKRLENQLKENFKIKCNVRLLNVYDIFNIEESQLNNSIKVIFSEPPTDKIVEKKDFESLKYFAVEYLPGQFDQRADSALQCLKLIYNDIKDVTIVSGKVVIFDGNIDDSTIEKIKKFYINPVESREKDLSKLEIEPHQKADDIKDVENFINLNIDELHKYRDTLDLAMTYKDIEFVQNYFKNEEKRNPTETEIKVLDTYWSDHCRHTTFMTKINDVKLENDKSNFSEVILNAINRYYSMRKELYGEDVDSKRDINLMDMATVSAKYIKKKGKLEDLEISDEINACSIYIDVDAIDENGKNKIEKYLLMFKNETHNHPTEIEPFGGASTCLGGAIRDPLSGRSYVYQAIRVTGSANPLEKLEDTLAGKLPQKKITTTAAAGYSSYGNQIGLTTCLVNEIYDEGYKAKRLEVGAVVGAVPVSYVRREKPKAGDIVIVLGGRTGRDGCGGATGSSKSHTDTSLRLCGAEVQKGNAPEERKIQRLFRNKEVTKLIKKCNDFGAGGVSVAIGELSDGIDINLDVLPVKYLGLNGTELAISESQERMAVVVESKDADNFIKLANEENIEATKVATITDTNRLVMYLKGKKIVDISRKFLDTNGAKQETNAVLKDINFENNPFSTKNACSLTSHWFNMIEDLNVASQKGLIEMFDSSIGATTVLMPFGGKYQMTPSDVSIQKIPIFDNNAKEINTASAISWGYNPSIMKWSEFHGGIYSVIESMSKLVSIGADYKNIRLSFQEYFEKLGNDAKKWGKVYSALLGTIYAQTEFDIPAIGGKDSMSGTFNNISVPSTLISFAVSTVNSKDVISPEFKSANNYVYLIKHNMLENYIPNVSEIKENFDFIHQNIKDKKILSAYTIKFGGIAEALTKMSFGNRIGVDIKDELYFFNLMPASFIVETKEELNYKNAVLIGKTINEYKIKVCGETVDLEEIEKLWLDKLSPVFPYKTYEDVETYQLAEYKREAPFICKNKTAKPNVLIAAFLGTNCEYDTQKAFSDAGANTDIFVFRNIKPEYIKESIEEMSKKIDNSQIFMIPGGFSAADEPDGSGKFISAILTNEKIKNSIHKLLERDGLVLGICNGFQALIKSGLLPYGKIGNITENSPTLTFNKIGRHISQMVTTKVVSNNSPWLYNIPVGSELVVPVSHGEGRFFADENTVKELIKKGQVATQYVNLESKPTNEFRFNPNGSVYAIEGIISEDGKVLGKMGHSERYGNNLYKNIITKDIYNIFENGVNYFK >gi|343387351|ref|AEM22841.1| Glyoxalase/bleomycin resistance protein/dioxygenase, 2555239..2555622 [Brachyspira intermedia PWS/A] MKIAHIAVWVKDLENIKNFYIKYFNCICNDKYVNEKKGFESYFLKFEDDCRLEIMTRKDIKERNTNDDMYGFAHISISVGSKEKVDSLTEELEKDGFKIASYPRTTGDGYYESVVLDSENNRIEITI >gi|343387352|ref|AEM22842.1| metal dependent amidohydrolase, 2555652..2557346 [Brachyspira intermedia PWS/A] MKKLYFVLLMILSVLSISCYDKITHKIKVYHNGNILTMQGDEPVYAKAIEIRDNTIMKVVYTEEDEKSIVNNVYAEVVDLQGKTLMPGFIDSHSHLVRFAQALTTVDLTGSTNLLEMAQRITNYIEINKLKPDAWVVGFGYDNNLLPDKKNPNRDDLDKISTTHPIFITHASGHVGAMNSKALEEFGVDENTPDIEGGVIERYPDSRKPTGYMEETAFLHYANSINFELTDEDLMRFVNQAEDVYLGYGITTAQDALLSTAEFPLVNNMITNNRFRIDIIGFIDLKNSDSIVETNKEMVGKYKNRFKIGGYKIFLDGSPQAKTAWLEQPYVSGPARYRGYGIYDDAAVEKYVEKALDDEMQLQAHCNGDAAADQYINAFSNVMQRRNTTNNYRAVLVHSQIIRDEQYTSMSNLNIIPSIFVAHVYHWGDVHIANLGMERASQISASRTALNNNLAFTYHQDTPVIKPDMLETIWCAVNRITKNGVLLGDNQKVTPYEALKAITINAAYQNKEEDLKGTIEEGKLADLVILSDNPLTCEPMKIKDIEVIETIKEGKTLYTKNTAL >gi|343387353|ref|AEM22843.1| translation elongation factor G, 2559214..2561304 [Brachyspira intermedia PWS/A] MGKIYNPESIRNVALLGHVGSGKTSLNEALLYRAKSIDKKGEIERGTTVSDYTDEEIKQKMSIRTSLSFIEWNDHKINLLDIPGSGDFSGEINPALRVAESCIVVIDAEFGIQIETEKHWQMANNFRRPRIVFINKIDKEMVDHKALLEKIEHNFKEPPVVPIQIPMGNGKDFKGIIDVIYHKAFFRDEHGKIVEAEIPEEYYEEYRATRDRLKELVCEVDDSLMERYLDGGKFTDEEYIEALTKSILQYKVVPILFGTSIRDIGMGALLDTIIRYMPSPSYVPVTDGTDLLTNEPATRTILGDNNPFAAFVFKTTIDQYAGRISFFKVRSGSIKSGDEIYNSRTGKKEKVSHIYMARGKKQIESDTITSGDIGVLAKLSDCRTGDTISVPSAPFQFLPLKVPQPIYFTAIKILKNDIKALEVLDTISQEDLTFNIEYDSETKETIIKAMGALQVKLALERVVSLTKAEIEQSVPRVAYRETIRKQAQAQYRHKKQSGGSGQFGEVHLEVSPLPRDGGFEFINDIFGGAIPKQYIPGVEKGIQDALAQGPLGKYPMVDIKVRLFDGKYHDVDSNELSFRIAGSMAAKEAFKNASPVLLEPVMKVTVYVPEEFTGSIMNELTGKRGKILGMEAASNTIQMIKAEVPLSEMLTYSIEMKASTSGRGTFEMEHSHYQELTGPLADKVIEERKALLGSGE >gi|343387354|ref|AEM22844.1| phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type), 2561392..2562210 [Brachyspira intermedia PWS/A] MLKIIDKITKEHVFEDLESKDKESLFRALSEKIAPVASASADAIFDAFKKREDEYTTNIGNGVAVPHGRIQGYGKTDIFVGFLKNEINYDSDSDEKSPVKLVFAILSDLDNPQDYLLNLSQIFFLVNQKEILDKVMATKSYDELAAVLESFKKLDEKFEAEKQIKFLIELERAEIQIKAYELYSSTHSQQKSDVVLEEYKKYKDTILSKIDVAVLENYKRIKENKGEALAKIENYKCSACNVAIPKMTVNEVRRQNQIIMCFHCGRILFTTD >gi|343387355|ref|AEM22845.1| hypothetical protein, 2562219..2562629 [Brachyspira intermedia PWS/A] MISNLLKIWTAKRNILIILLLAFLYISCSPNKPSSSISEFYNYPNPFSPSKENTTYKVSINSGEIISAKVEIYSQNGDLMDSKDLTIDASKKTATCIWSGLDKNGKYLPSAVYDAKVTVKDNQDSTFTAEFKTSIR >gi|343387356|ref|AEM22846.1| hypothetical protein, complement(2563069..2564193) [Brachyspira intermedia PWS/A] MEDIVKEYIDYTKQKSNIEEVANKKLISQNEKFLKLKEYVKENHDKELDICRQIASEFENMDILKSYYAANFVGHSLHHEDIVDDEIGKKIINLFFRNIDNACRFIENAAQLYNVDEDDLTDDDIARINIDIMYRLDYKPLEAFIGIDMMIPPVMTVICSNQDLRKYFINLGLEDHIEYLEGYVNALSYVHIGIEACYKTKILVLSPKVQRGFYIEASDMSNGYYLITLLEAELYKKGLLKRYGIDNYEFNETIYNIAAGNEHPQELMEAEAHQQYYTIYALQKDGTYNIEDENGELDCYKILYSDMSPEEIPDLDGTHILIMDSEGMWAKPVKWDISYFTKPHQKLKPYVKILDEISDEEYNSWIEKIKNSNS >gi|343387357|ref|AEM22847.1| hypothetical protein, complement(2564230..2564907) [Brachyspira intermedia PWS/A] MIAVLVGSIIGFAFKNKLSKRYEEPVFIAAGIISLTIGITMAITTKHILIFAVSIMLGGVTGTFFRIEEKIELFGEFLKNKFAFKENSGNFALGFLTSSILFCSGSMSIVGSFQAGTQGVYDLIFTKSVIDGFVAVFMSTVYGIGVAFSIISIFVYQGALTILSSFLEPYVSETMLNEVSAVGGATVMMIGINLLKLAKIKTGDFLPALIYSILLVLLIPYIQFL >gi|343387358|ref|AEM22848.1| shikimate kinase, complement(2565017..2565544) [Brachyspira intermedia PWS/A] MNNIKNNKIIFIVGLPGCGKSALSKMLAEKLNYDLYDMDSFIEHKEGRTITNIFAENGEPYFRNIESEVLEELSNLNNAVISTGGGIVLAEKNRNIMKDKGLTIFIDRNPDIILENIDPTERPLLAKDKNKLLELSKQRDGLYRESAHIIFTHNTWEDNIDNTFKKFYDCIIDYI >gi|343387359|ref|AEM22849.1| prephenate dehydratase, complement(2565537..2566661) [Brachyspira intermedia PWS/A] MLNDELQELRKDIDRIDKQIVNLIDERMKVSLKVGETKKKYNAPIFDPKREKEVIAKKIELLENKELSSLITTIYNDIMYTSKQLQKHLIDEYNAEEDKKEDDKENIKYDEKIVYQGREGGNGHEAALKFFGENAKLIKKEHFDDVLESIRSGECYYGVLPLENSSTGMVNEVLDILADYNCKIVGEVYLPIEYGLMAKKGTNIKDIKKVISHHQALKQCSNFIKENNFEEITASNTAEAAFIVSNGDDKELASISNKHASKIYDLEMLEENIENIKGNTTRFIIVANYDNALKKGNKMTIRFLLPHENGSLADSLNKLKSFNLTSIVSRPHVERKWQYYFYIDMTGDFEKSKKEFEEFKNSVENLIVLGVYNE >gi|343387360|ref|AEM22850.1| hypothetical protein, complement(2567798..2568628) [Brachyspira intermedia PWS/A] MKKQLFKFILCLTAVIFAVSCGGKNNSTYYPGDDTTSTSLSVFEEIDYTQPDYNIIEADTGNEVSSEIDRAKFKFNISPSSANCTVSITKVTGGTTTLSSSDFNITTANGGTEATISLSSSGLSSLSRETKGKEIEYTLTLTFTATSAEVTENKEDTVDIKVRIIPLKVITKTEVENMIKALRKVTLAYSSGISSIADYDFSNITFNTAGIDVTATKEYPAGIPPVQFPASEAVSSLKNKIEELQEYKNLGFGTSWNDGIKTSHTISYDKKQQMQF >gi|343387361|ref|AEM22851.1| hypothetical protein, complement(2568954..2569523) [Brachyspira intermedia PWS/A] MAKRDENNNIDINAKRDINNFDLYYFIKNKKYYLPKYSFILKSKKRLMSIGEFLNLLKKNSIKNMSINLLREWDNKELLPAYRVERGMIRTESRYYIMEHLDIVKEIVKLKSYGLEIREIEKIIFENKSFEILFLSKIIKNKELFMKMKDIIKNIKHIEDDLVSSICTEVKKYLILMMMILKKLLMINI >gi|343387362|ref|AEM22852.1| hypothetical protein, complement(2569541..2569774) [Brachyspira intermedia PWS/A] MKDYLRNLLKILYILKIVFRDSLSINMEVVFGRGLHSENKIPVLKYVVLRQAKKYRDFGYKYRLNKKTANGSMIITF >gi|343387363|ref|AEM22853.1| hypothetical protein, complement(2570247..2570597) [Brachyspira intermedia PWS/A] MLNNLYFINIIDYEEYKKYNCFKLEELINYICDLIQDDEKFINIEENIKDFEIYQLIMKEIESIKESKIIYDRYKLFYFFLEEEYKLSYDNTEDIIKKINNFYNIYKSIEIPIKNI >gi|343387364|ref|AEM22854.1| hypothetical protein, complement(2570669..2571172) [Brachyspira intermedia PWS/A] MYDRILDLIRDNKNYNMEENEELQKGILYYDSVFHYLQYFIGYLFTDKKIINEEEYKKIIALYIYKYNTLRNHNIYRFYKYYSNNETAKKYNIKDYGIINYNIYYYQDEEKIIKKYLIYDYKEIYIYYYKFILMRIAYNIVGYHRDEKDYIKTRIEIKEEIEKIQIV >gi|343387365|ref|AEM22855.1| hypothetical protein, complement(2571241..2572188) [Brachyspira intermedia PWS/A] MASNKNSKAKQFNIKNNDRRYIIEKYNTSSKYDSYESTINKCYDDYYILHSLKNIVNKINALKKRNNDIKVLLVSINSGKPAQLEKGKYKYIEIEFDKRLNYKEGVPDYTDDIYLFLDENKICFFEIGVFLELYNNLKSYEQFSNIYIYEIINKIISPYKLIYENFPFFNKERNYKDILVDIKNKNFELIIKEREIERLKKVMQEYFDNNKKTVSILPSYRLYKEDKQKDTRYYTLESLIVLDEVLRIYKDIKSTEFVFIRNISYLYDAEDIAKEIFNFDKILKSNIYTIESEKYIKEIILNISDNKERQKEIKK >gi|343387366|ref|AEM22856.1| hypothetical protein, complement(2572318..2572806) [Brachyspira intermedia PWS/A] MRRKLLIISLLFIALFTVSCDMFKKAEEVTGPITEIITGIDSTYVGTWYVDETPDVSNFDFIGSYITIKEDGSMDFYFRKSNRTFNYPSSSILKVVNSYIATYNETDPNNNNAVLKKHILNMTFEERNNGNGTFSSIVNVSYSVEENNAGTIIKGVFVRKVQ >gi|343387367|ref|AEM22857.1| nicotinamide mononucleotide transporter, 2572976..2573662 [Brachyspira intermedia PWS/A] MKNFIKNELQNWKAAEIIWIIIASGIILSLSIYWKENIIGIVSSISGILCVILTGKGKLSSYIFGMVNTVLYSIIAFNAKYYGEFMLNVFYYIPMNIVGFILWSRNINNESKEVIKTKLDNKYKIIIFALSFISIFIYGLILKKLGGSLPFVDSASTVFAVTAQILCVKRCTEQWIMWILVNILNISIWYINFSSGGDNIATLLMWSVYLINAIFMFIKWYREANLQK >gi|343387368|ref|AEM22858.1| nicotinamide-nucleotide adenylyltransferase, 2573675..2574679 [Brachyspira intermedia PWS/A] MYNVGMYGGSFNPLHLGHIKCIIEAANQCKKLYIVLAVGNNRNEIDKKIRYRWLYQLTKHIGNVKIIFIEDDANTKEEYTEDLWEADSIKIKNAIGEKIDAVFCGDDYKNKDSFYTRYYKESELIFIERNEISSSKIRENVYKYWDYLPNIVKPYYTKKVLLLGSESTGKSTLTINLANYYNTNYIEEAGRKLSEKSGTDLLMLSEDFTEILLTHKLNEIKAIESSNKILFVDTDAIITNFYMHFLEDENIIDNERLAKAIIHINKYDAILFLEPDVDFVQDGDRSEVIKNDRIKYSNKIKDILHNLNIKYHSINGDYQERFKKSVSIIDKLFL >gi|343387369|ref|AEM22859.1| hypothetical protein, complement(2574769..2575779) [Brachyspira intermedia PWS/A] MFKDSRILIIISAVLLFMISCSNNPTNPNNGNNNNNNNDIIDKSKIDEIVASLGDLYINSSTENKKVKFTFSKETKTTASVNNYTVTVNATTETSSVPSANDRLYHHAIAEAVINKILSLSSTVTSEYVLDSDNVSIQNVNDGKRSVKVYIPFKKNNNSGNIILELKLGATIDSTVEFEKLTLSIENGAVGLQNIALQLYIQYATLEGELKEEDEIIRLGTLKTDDPTITYSVLRIEGLPVDAIGSMPVEVDFSNILKGTEAEKKENYTLLCDTEYRRFILTIKKPAVDVFIENLPHQSGSPTGQRGNIKITVKASKKYCNDSNELDIYIQITGKS >gi|343387370|ref|AEM22860.1| von Willebrand factor type A (vWA) domain containing protein, 2576045..2576989 [Brachyspira intermedia PWS/A] MPIIIFAYIQTRKNHSYSVKHPRVSMSKVLKSRYYVKDIPFMLIILALTFSIIGLARPARVSHLSDINGEGIYISLVVDVSPSMMAEDMIPTRLEASKKTMIDFIKKRNFDKISLVSFALRASVLSPATFDYTSLEEEIKKIEIDEEGSTSIGLGIATAVDMLRSVKEDNEKIIILLTDGENNSGEIDPKLASEIASNFNIKIYTIGIGDANGSHAWVTYDDPSYGKRRIRADFTLNEESLIDIAATTGGKYFNAKNASALDNVYNTIDRLEKKPILDDDLIQYDELYKPFIIIAFLCLCLSIILSTTRFLIIP >gi|343387371|ref|AEM22861.1| S-adenosylmethionine synthetase, 2577142..2578326 [Brachyspira intermedia PWS/A] MAEIKNYYFSSESVTEGHPDKICDAVSDAVLDECLKQDPNSRVACETLAKTGMIMIAGEITTKAKLDYQKIARDTVRRIGYTSSDMGFDADTCAVMESIAEQSPDIDMGVSAGKGLFNSESSNVSEGAGDQGIMFGYAINETETFMPLTIHLAHRLAERLTKIRKDKVVDYLRPDGKSQVTVEYKDGKAARIEAVVISTQHAAGVEHKQIEADIKKYVINEICPANMLDENTKYYINPTGSFVVGGPMGDCGLTGRKIIVDSYGGHGAHGGGAFSGKDPTKVDRSACYMARYVAKNIVASGIADRALVQFAYAIGVPEPLSVYVNTFGTAKVHDEVLANIVSKELDLTPAGIIKRLDLRRPIYEKTTAYGHFGRELPEFTWEKTDIKDLFANAK >gi|343387372|ref|AEM22862.1| conserved hypothetical protein, complement(2578416..2579684) [Brachyspira intermedia PWS/A] MKLFTNSNNRDDFFKTALLNSIKENDNIFIATAFFSDTEIINKAVEKNCNIKLIVRLSLATSIERLKEIYKKENVYVRFFTSDTFHPKLYIFGSTKAFIGSSNLTKSGISRNQEINISIESDNQNFDDLISIFYDYWESAEVLDDNIIEKYSKIEEEYYNVDIQIKNFKQKLQEEIGDFKFNNITTIDNTKKSKKSKKFSYVSDFKRKYQIFLERYKKLTEMYTSSLEKLNMDRKYKDIPLKIEIDQFLNWIKENKIKKGESYDKINDDKIESKLKLLIEEYYNSYNIESKYIDDYKKCRYTLKKDNIDTVSYNELYNALLFINAFRDRRRFFSSNSMKKEFLNLNNNLKNIIKTITYLLYDSEQYEIKMTNCIYDEDFKLKEFGENCVKELFGVMSDDENIPLCNDRVFEAMEYLGFGNLK >gi|343387373|ref|AEM22863.1| putative recombinational DNA repair ATPase (RecF pathway), 2579897..2580964 [Brachyspira intermedia PWS/A] MILKELTLRSFRNYNENIFEFSDKINVLYGHNGCGKTNILEAIYMLGNGVSFRTRLDRELVKNGNDNYFLRGIFREDEFNYDTNIEIAYQKKIKKVFIDKKEVSSRKDLIGRILYVIFLPNDTDLVIAEPKLRRDYFNMLISTISSEYLLALIKYNKLLKMRNICLSTKPNEAYIYNSDIAKLSLYIANENKKYSTLLEEKMNEIYKNIFNDENPYAIKYQSTIEDILNENEYMKKLETTLQEQIRMRTTYFGIHRAEYQFFYKDSLSKKFSSQGEKRMFTLIMKLASEKILSEYRKKSPILLIDDAMLELDNTRRDNILEYIKTLGQVFITVTEKEKVKNFENGKVFDIPNIRM >gi|343387374|ref|AEM22864.1| lipoprotein, 2580985..2582736 [Brachyspira intermedia PWS/A] MKYKPQTKDELKKLVKDENIYLGDIDTSLITNMKSLFANSKRENFDGIENWDTSNVTDMSDMFAGALNFNSNINNWNVSKVTNMSGMFSSAKKFNQPLNDWDVSNVKDMEFMFSEAESFNMPLDKWNTSKVFTMSCMFCKAINFNQPLNNWDTSNIENMQSMFAKAYNFNQPLNNWNVSKVEDMTAMFEGAKSFNQDINNWNVSNVRRMAHMFNGAESFNYSIENWIINEGSSIWEFFSGASSFKDIKSILNIYFISKKVNDRKKLLNMLENCDIKEVYKEVIKYNKLKDFIKKLENTYYDELKELIENKDSIISEYKKSKSNKLELKDNEKYKPKDKVELLKLIKEKVKFNKIDTSLITDMSGLFQNSKLKKFDGIETWDTSNVEDMHNMFRGALHFNHNINNWNVYKVVNMEHMFSGCELFNQPLNNWDVSNVKYMAFMFNECKSFDSDLSNWNVSNVDSMEYMFENAYSFNQDISKWNISKVKKLYSMFEEAKSFNQPLNDWDMSNIESIHGMFKGASSFNQPLDKWNTSNIKDISFAFAYCINFNQDLESWKLSEDVNMKYAFINSPIENNPPSWYKEN >gi|343387375|ref|AEM22865.1| hypothetical protein, 2582829..2583197 [Brachyspira intermedia PWS/A] MEGEYYMIIDKLPPNYINNIDDLFEHLYGVRPKKDGVSAELLYYIIKKNSNIDPNKEYEWNKEITFYEYNNVQIDVLEKIKDHYSQIIDIKDWKKNVDRPEVQKLESTTLHFEKIIIEYHLV >gi|343387376|ref|AEM22866.1| hypothetical protein, 2583278..2583766 [Brachyspira intermedia PWS/A] MRLSEYKDIENKLLEIVINMDIVLNIKMFPIFSNDDKEYNYKTFNKKTINMTIEKKDILLVNKNKRFDELEKNILSDCKWENLNDNIQKATLYEPIYIYFDNKIIKASGIEFTRYLHKQKIVVTKGKCLISLCDENGNVLEVFFEEELVKYKDEVLNMINNI >gi|343387377|ref|AEM22867.1| lipoprotein, 2583982..2586603 [Brachyspira intermedia PWS/A] MHKYKPQTREELQKLVQDENIYLGDIDTSLITDMSGLFSFERRKDFSGIGNWNVNNVTSMRGMFYNCYSFNEDIGKWNVSNVNNMGDLFYNCINFNQNISEWNVSNVINMRGMFNGCKNFNQPLSKWKTSNLENTEYMFRNCTNFNQSVNHFNMSKVKNAIYMFEGCKEFNQPLDKWDTSNIEYMNGIFKGCTNFNQNINNWNTSSLSIVIEMFNGCENFNQPLNKWNISKVRHLTAMFKDCHHFNQPLNDWDISKVENISNMFEGCKSFNQDLDKWDTSNVKSMNSMFWKAKSFNKPLDKWNVSNVNTMVAMFYNSGFKEYDSLNTWELNDKVIIDNIFDDSAVSSLSLKWILYLYTFSNINVLSVLEKNIKEIYKIAHTSNNKKIKAVKTRLENLYYNDLKEFLDYELFCNIEKYEESINKKLNKKDEAKVSYIENCNVLVKDKSREVDTKVIKYIYLKYLELKRDIYHLIEIDSIINLLDRESFLTFAKNIYKETYKETTAIIYTLYGDDEALREIYKKEKDSKFFLMILSSIKITEITDYAIKLLYDIYSKAKKHEIRISALHLLKEISKEKHLSLEDLELKFTSNFGFDLKGEKIINDDYKLILNSDYSVNVFDIKNNKLLKAVPKDFTEAIKEEIKYIKKEIPDIIKKLSLKLYKSLMYEKKYNYKLFKEIFIDNPLMNKFSSSLIWNLYDKENNFITTFRYNNDGSYSNCDDEEIKINDDSFIGLASPIEMNEETITKWKKQLEDYELFQPINQLSIIKLDKNNLENEINKLQNIEIAYGTFKAFGDRYSMIPSYMDYGTVKEYNLKINNGDNFDIIIDSEDNIDYKDKVKINIKFYNENNEKVSERFIYTLLILIIWDFRLTDLF >gi|343387378|ref|AEM22868.1| ankyrin repeat-containing protein, complement(2587006..2588007) [Brachyspira intermedia PWS/A] MESIKNNDIDKVKILLRDGINLDLYNINYGMSPLMYAAQLGNEEIVQELLDFGAKDFDFAFYVACAEGYWNIAEDIMKSGASNYNIALSYAAIGGQLDIVEKLIDLGAKDLNPALVSACEGNHLEVVKYLIGKGANVNTRAYIEVYRNYKGAERKSPLTASTNIDIIKELVNAGATNLNEAIIYNAETISTNFDSTYSTAILNEYINLGADINSMSTNDGKTLLMYLIEKRQLDFELIKKVIELGADVNARDRNGNTVLIRAVMYEYEAPIQDSNLNKKVYRTIGTPINVIEELLKAGASPTDRNSYGNTAYRLAARKKRDDIIKLFDEYLKR >gi|343387379|ref|AEM22869.1| hypothetical protein, 2588287..2588718 [Brachyspira intermedia PWS/A] MEISIRNNAPYIRNTNNIRNNNNNINNIVQEASQKTPISEVGVCKTCASRTYQDGSNDIGVSFKTPTKIDPSSAPSMVASHEQEHVANNQRSAEKSGGEVIFQNVTLTTNICPECKRVYVSGGVTKAAIASPSSKGNNVDTYA >gi|343387380|ref|AEM22870.1| beta-D-galactosidase, 2589259..2591487 [Brachyspira intermedia PWS/A] MREIINFNTNWKFTKEWNDNIKIEKLNGENITLPHTVAEIPLHYFNESDTWLVSGYQNIFKYEKSKLKDKRILINFEGAMAAAEVFINGKSFGEHKGGYLPFVYDITDELKYGENIIAVKLDSTEREDIPPFGNEIDYLCYGGIYREVQIIIVDNISIENVMLTGLANQNITGKIRIRNSKKESIKETIAINLYNREYHICEIKKEVTLKKGELFTDIKIDEHIDSDRIELWDIDNPRLYRLEVSIPSNEDSFSIKMGFRDAKFTENGFFLNDRRVKLRGLNRHQSFPYVGYAMPERIQKKDADILKFDLGLNIVRSSHYPASRHFLDRCDEIGLMVFEEIPGWQHIGDKQWQKVAVENVKDMIERDFYHTSIIIWGVRINESQDNHSFYKETNKTAHELDKTRQTGGVRYLVGSELLEDVYTMNDFNYDGIADPLRAQKFVTKLDKNVPYMITEYNGHMFPTKMQDCEERLIEHTKRHFEIINAVAIDNHISGSTGWCAFDYHTHYNFGSGDRICYHGVYDMFRNPKLAASVYSSQMNTKNEIILEPITIYARGERAIGGISPLMVATNCDYVEIYYRDELMVKEYPATGKYQGLKHAPVIIKIDVNVPGVSDMGWGDMKLIGYIDGKPAIEKKYLNNPTFKGLEVKADDYEINAVSSGSTWDSTRITVKAVDAIGNRLPYINEAITIEVKGSGELIGNDNPVLEGGYYSFWVKSNKTKGSIKVTVKNKRVKEETIEIKTI >gi|343387381|ref|AEM22871.1| HTH MARR, helix turn helix multiple antibiotic resistance protein, 2591718..2592158 [Brachyspira intermedia PWS/A] MKNEDIKKYMEVIYDFWYTSNRFYYLWAKQYGITDLALFSLFIIYNSGECVQNTITEKLSVPKQTVCSILDNFEKKGYIKKKINPKDKRNRLISLTKKGLTFAEPILKELEKLDMQMLKCLTENEIKNYVEPQKKLMTFMENYFNN >gi|343387382|ref|AEM22872.1| hypothetical protein, 2592220..2592660 [Brachyspira intermedia PWS/A] MKVIPSDSLLKNRKEKVSEKLCADCNSLCCHDLVMEISPPKNESELNTLKWYLHFRHSFIFIYENTWYHMIRSECRYLDKKTYLCKNYENRNEICSKHSPPKCERYEEWYDVIFDDQYELEKYVYEKKIIKKKSSTTKKKVAKKTK >gi|343387383|ref|AEM22873.1| Fe-S oxidoreductase, 2592681..2594144 [Brachyspira intermedia PWS/A] MKKKEIKKVCITYPPFEYNNGYPLISLNRQFQWLKNPSYAYPMLPSYAATLLKNNGINVVFLDTIASNITTIDWFNNIDDIAPDLIFFEVKTPIINYIWDTIEAIKERYENIYVVLAGDHVTALPEESMEKSKTDFVLTGGDYDFLLLNLVNHINNGEKLDKGIYYRTSNGNIKNTGKFELEESLDRLPFIDRNLTNWKLYSKTNEYFKKTPGTSIMSARGSLYNNYNSNSSNILFDKVRVRNPINVIDEIEYLNKRYGIKEILDTSVYFPTGEWLSLFCETMKERKLNKKVYIDCYVYLGILEYQDYKMMKKSGFKTVIFNLPSGNAKTIEKLGITDNTVENVIESIRLAKKAGLFTDIMVKIGYPWETDEDIINTFNIVKNLMLNGYINSMNVSLFIPYPGTKLFKYCDENNLIKTKNWFDYDMRKSVMELNMDDDQIFKYIEYFYNLSFNPKYVLQKIKSIRDIYDIKYNIKSFKNILSFYLND >gi|343387384|ref|AEM22874.1| PpiC-type peptidyl-prolyl cis-trans isomerase, 2594231..2595184 [Brachyspira intermedia PWS/A] MRKIIVFILSFIFIQSNLLFNDVVNSIVGIVGSMPITYEDFLSRKTFLTLQARSIGQRVTDDMVYKDLVEERVMYLKLKENNFVIEENDVKRRLESIAKQYNMNADQFAKQLMAEGISYDEYKNSIKKQIAMENLYGLVVNNTEISDKEADEFYNNTKDKSAFEADTLVKLSWIFFKATTFTEKGEKQELATKVRGMAARGKDFAELAKQYSEDEATRKNGGDLGYNLLYDAGKRSLPAQINAGLNLAKRGYKVGTVSSVRELVGKGFYIVKIMEIEKDMESIRTRVKNYLSESKMRESFIKWLDEETKRVSVQIYK >gi|343387385|ref|AEM22875.1| carbamoyl phosphate synthase small subunit, 2595444..2596529 [Brachyspira intermedia PWS/A] MKRYLILEDGSHYEGIGFGADNFKVGELVFNTSMTGYQEVLSDLSYCGQITVMTYPLIGNYGINRDDFESLNPAIFGLIVKEACKSPNNFRNSQTIDEFLKLKNIPAIENIDTRAITKKIREIGTLKAVMSDTIENKDDIVKMLKETPYMNDHVKMVSTKNAFPIPNRGKKVVLIDFGAKLGIIRELSKRNCDLIVVPYDTDFKTIMSLNPDGIMLSNGPGNPKDVKESINTIKELIGKVPIFGICLGHQLISLACGADTIKLKFGHRGGNHPVKDLETGRISITSQNHSYAVKKESLSNTDLIMTHISLNDGSCEGVKHKKYPVFSVQYHPESNPGPEDSKYLFDNFIDMINNNYGEKNA >gi|343387386|ref|AEM22876.1| carbamoyl phosphate synthase large subunit, 2596522..2599719 [Brachyspira intermedia PWS/A] MPKRTDIKKILVIGSGPIIIGQAAEFDYAGTQACQSLREEGYEVVLINSNPATIMTDAAIADKVYIEPINLDFAKRIIYKERPDAILGSLGGQTGLNLVVELAESGILDEYNVEILGTDLNAINCAEDRELFKNLMNEINEPVPESIIVHSVEEAIEFANKIGYHLVVRPAYTLGGTGGGFARNEKELIEICETGLKISPVHECLVEKSIAGYKEIEYEVIRDNNDNAIVVCNMENVDPVGIHTGDSIVVAPCQTLSDTENQMLRNVSLKIIRALKICGGCNVQLALDPNSFKYYIIEVNPRVSRSSALASKATGYPIAKISAKIAVGMTLDEIINPITKKSFACFEPSIDYVVTKFPRLPFDKFPNADRQLGTQMKATGEVMSIGRNFEESFLKAVRSLEIKCDHIIHNDVSEYTTKKLWERIELRDDLRIFIIAELIRRKEDINDIIEITHIDKFFLDKIKNIVTLEEKLYKNKMDIDVLRECKERGFSDSYISKVWEAEEIDIYKLRHENNIIPVYKMVDTCAGEFESETPYFYSTYENENESFKSGKESIIVLGSGPIRIGQGVEFDYSTVHSVMTIRDAGYEAIVINNNPETVSTDFSISDKLYFEPLTIEDVMHIIELEKPKGVIVQFGGQTAINLAEKLVMHGVNILGTSLENINKAEDRHEFEEMLKTLNIPQPKGETAITVDEALVIANDIGYPVLVRPSYVLGGRAMEIVDNDASLKVYMETAVKEVSNKAPILIDKYVIGKEIEIDAIADSENNVFIPGIMEHIERAGIHSGDSISVYPTQTISNKVKETIIDYAKRIGIGFNFIGLYNIQFIVDKENNVYVLEVNPRSSRTVPFLSKITNVPMANVATMCILGKSLKEQGYNNLYKEESDKVFVKAPVFSFSKLRKVDTILGPEMKSTGEALGFDINFEKALYKALIASGLRIPLQGNVLLTISDNHKNEILDLAKRFSNIGYGIYATKGTANFLREKGLYVKEVSKIYEEGLENIIDTIRLGKVDYVINTIESNSQTHSDSLELRRASAENNISCITSLDTAYALLKVIESMNFTIMDLSNI >gi|343387387|ref|AEM22877.1| 3-deoxy-7-phosphoheptulonate synthase, complement(2599798..2600829) [Brachyspira intermedia PWS/A] MKPNAKEEYINNITDRLIEAGLGTNKIVGVDCTVIGIVGDTSKVDRELMATLPGVARVLKVQEPFKRANRAFKKEDTVVDVSGVKIGAGKPVIIAGPCSVESEDQVINIAKSVKAAGASILRGGAFKPRTSPYAFQGLALDGLKILKLAKEEVGIPIVSEIVSIRHLEDFENTVDMIQIGARNMQNFELLKEVGKLKKPILLKRGLANTMEEWLMSAEYILDKGNSNVVLCERGIRTFETYTRNTFDVSAIPMIKRMSHLPVIGDPSHASGKAWMALPLTLAALAAGADGMIIEVHNDPEHALCDGAQSIKPDTFEEIMASVNMMAETVSKIKERHGGKIYTK >gi|343387388|ref|AEM22878.1| alpha-glucan phosphorylase, 2601212..2603773 [Brachyspira intermedia PWS/A] MKLNKYMVSPSVPKELEPLIEITKNFWWCWNQKAVTLLRTIDIDNWDKRDHNPIRVLGESLQERFDAMLQDDAAMMNLAEVYDEFKTYMKQETWYNSLDDSQKTPNEKIAYFSFEYGLHESLPNYSGGLGILSGDHLKSASDLGLPLVAVGLLYRKGYFRQYLNADGWQQEYDIENDFFNLALEKVLDKNGETMKVDVDLPGRKVYAQIWKANVGRIELYYLDANIEENRIEDRDITAQLYGGNLETRIQQEILLGIGGVKALEKLGIKPTIYHMNEGHSAFLSLERIRQLMENNHLDKNTAREVVFSSNIFTTHTPVPAGNDIFPIDMIQKYFTDYVKHIDMTMDEFIRLGRINPDDQKESFCMTVLALNLSAENNGVSELHGHVSRAMWKDIWKGVPVNELPIDSITNGIHTLSWISFDMQNLLDRYLGPRWRTKPLEYEIWERVQKIPDAELWRTHERRKERLIDFCRERLKTQITNRGFTKSEIEHADQILSPEALTIGFARRFATYKRGTLLFRDLERLKKIVTNSERPVQIIFAGKAHPHDNGGKELIRNIAEICRREDFRDHIVFIEDYDINVARYMVQGVDVWLNNPRRPLEASGTSGMKVPPNGGLNFSVLDGWWDEAYDGQNGWPIGNREEYTDLEYQDEVESKALYNVLENEIIPLFYERGRDNIPRQWVAAMKWSMQTVCPVFSTNRMVADYFHKFYNNASRRYFNMTENEFAKAKELKAWKQDIASKWSKVLIENTISEMPSRNLKVGSKFEVKTIVNLGDIAPDSVRVELYHGKLSMKEEIIDPITVEMKHSADLGNGRHSFSGTLECTNSGQSGYAIRMYPYHKDLSYKFDMKLIIWS >gi|343387389|ref|AEM22879.1| TRAP transporter solute receptor, TAXI family, 2604028..2604987 [Brachyspira intermedia PWS/A] MRNVIITATTVILSLVLMIGCQKSNNLNYIFATGGTSGTYYSFGGSIASIWNANIEGMNVTAQSTGASAENLRLLNRHEADLAFVQNDVMDYAYNGTDIFDGEVLTNFSAVLTLYPEIVQIAATKESGIKSIADMKGKRISVGDAGSGVEFNAKQILEAYGLSFNDINKSNLSFKESSDGLQNGTLDACFIVAGIPNAALQELSLSKDIVLVSLDKTQLDEILNKYKYYTEVKIPANTYNNVTTDTTAIAVKATIAVNNNIPEDVVYNLIKTLFDKKADLATAHAKGEELNIEEAYKGISIPFHPGALKYYEELGYNLQ >gi|343387390|ref|AEM22880.1| hypothetical protein, 2605063..2605587 [Brachyspira intermedia PWS/A] MLKKIIICISVIIIIIALLFVPLFPRLILNSVKNNKDNFIFNINKKEFLISYTHSVNKGRIRDYYIINNNNDIVLDKTRFVSYGAGMSDPEGNEKIIITDDYIEINNINKKIKDLYLFVGIVADHRIEFDGKEIKLNTLFKPQINIKIQYKKVSLFTMITNIMNNKILRGNNET >gi|343387391|ref|AEM22881.1| TRAP transporter, 4TM/12TM fusion protein, 2605831..2607552 [Brachyspira intermedia PWS/A] MPKDKLPWYDVILAVIGAASWAYISFNFEALIRRAGIYTTTDIIIGIIGILLVFEACRRIVGLPILIISIVFIIYALFGAYAPGFLNHRGYSLQRLVSHLFYNTEGIMGTPIGASATFIFLFIFFGALLDKTGIGQFFIDICNAIAGGFDGGPAKVAVLTSAMFGTVSGSSVSNTVGTGSFTIPMMKSLGYRPEFAGAVEASASTGGQLMPPIMGAASFLMAESLGIPYMEVAKAAIIPAILYFTGIFIMVHLEAKKTGLKGLSRDSLPKIGELLMKKGYLVIPLATIIYFFVLGKTAIYAGLMGIIAAGLVAIVNSIVDIIMKRQVSFGFKDLIDVFVNAARNIISVAVACAMAGVIIGVITLTGLGLKIGAGLISISGGIPLLLLFLTMVSSIILGMGVPTTANYLITSTIAASAIIGLGYEPLAAHMFVFYFGIIADVTPPVALAAMAGAAIAKSDPLKTGIEATKLSIGAFIIPYMFIFNPDILMINTTIADVIPILITSLIGMFGVSAGLEGYVFRKCKAYERILFIIAGLLSIYPEFYSDIIGIAVIAILVIIQIVTKNKMNTAAAA >gi|343387392|ref|AEM22882.1| hypothetical protein, 2608141..2609340 [Brachyspira intermedia PWS/A] MINFDELIDRRKTNSIKWTKAFGEKPLKENQIPMWVADMDFKAAPEIIEAIKKEADFGIFGYFTYDEYYESVIKWHKERYNWDIKKEWLNFTQGLVQGFNIAISALTRPGESVLVLTPTYYPMFAGIKNQGCQIVESDLIYDDNTCRYTIDYEDVAKKVKDNNLTAALIGNPHNPTGRLYSIEELSKLADILIENNVKMICDDIHCDIIVDPSKKYTPLASIEKYANHIISMNAPSKTFNLAGAKVSNIIIQNEEIMRAFKFQMERFCVSVSILSLVACKTAYSKCAYWVDEMKKYVWDNYNYIKEYIENSILKDYIKAVPLEGSYLMFADNKNLMKEFNMNQEDLNNFYYDSCNLSLDEGNAFGKAGIGFMRFNLATQRYYVEKAMNNISEAVKKLKK >gi|343387393|ref|AEM22883.1| putative effector-binding domain containing protein, 2609361..2609834 [Brachyspira intermedia PWS/A] MDIEIVEKEDFEVIGKVAEGESEKHSKWVLPLWQEFNKNIKEIINLVKIDENNNLSGIWGIMNDIDETFAPWGERGKYMAGVEVKENSTPPEGWTKWNIKGGKFIKVKCNIENYSKVFTNVVENYAPKNGYIIIGNVMEYYIPNSKDFYLFFNIKGN >gi|343387394|ref|AEM22884.1| non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family, 2609836..2610429 [Brachyspira intermedia PWS/A] MLEKLVIATANQHKLKEIESLFKGTVIKEILSMPSDIGEIIEDGNTFIENSLIKAKTVYNHTKLPSLADDSGLCVNALGGKPGIYSARYGGETLGYKEKMQMLLDELKDKNDRTAYFITSAVCVLDDNYYIAVEGRVNGKIIENPRGFEGFGYDPIFQPDGYDITYAEMSLEEKNSMSHRALAMNKMKDILSSIYHY >gi|343387395|ref|AEM22885.1| conserved hypothetical protein, 2610693..2611217 [Brachyspira intermedia PWS/A] MAKLHIDNENVKKYIFNISEKLMRHFDLEYEITKEDEYFDLYAFHRNDFFKSFITKSTVYEGYSVFEHMLLRFIKELKKEDIENFQDMLIRLTPILSNPNKFHKRSLITGILVTESPLDKEWEKITKKFFYKVNYKLLFHGWSETQYAIVSMTDKNVYLPKMRKKELKLLLSDF >gi|343387396|ref|AEM22886.1| carbon starvation protein CstA, 2611283..2612920 [Brachyspira intermedia PWS/A] MVIFFVAYITYGSYLAKKWGIDPGKKTPAHTLNDGKDYVPTDAKVLLGHHFSSIAGAGPITGPIIATMFGWLPVYLWIIFGCVFFGGVHDYGSLVASLRHEGKSIGEVIRHNVSQKGKIMFTLYAFITICLVVAAFLDITAGTFAVNVDNARESAAAGTASMLFIVLALLFGFLVYRRGAGVAVSTIVGVVLLAAIIFISDKFPFLALQKIHWQIILVIYIILASLMPVWILLQPRDYLSSFLLYAMVVGGVVGLVIMRPAVQTPAFTSFMPSEGNYLFPILFITVACGAISGFHALVSSGTSAKQLNSEKDAKLVGYGAMLIEGIVAIVALMSVSAVAGNGEGTPAARFATGVATFMTSFGVPLSMGKTFVTLAFASFALTSLDSATRIGRYLIQELGEYTGADGRVHKTFLTNPYVATGITVLVSLGFTLYGYARIWPIFGSANQLLAGLSLLAVAAWIKNRQKRNSWENIIPLVFMFAVTLSALALVVYTNVMKATFDGYVLAGIAAVMIILAVIELFITGQWARGLSKETASNPNDPIKNK >gi|343387397|ref|AEM22887.1| hypothetical protein, 2613112..2613534 [Brachyspira intermedia PWS/A] MSSKKFKLKEEKAVFADIKSAISIAIFDNEINNYDGSVDTDVRRAVMYNKIVFENLVKRLFSYQASREDKKDRLKELSIIKMIKNESNSISKERIYYIENPNEKTFEFLNDVLDKDKKVRGYSEYILYSLFNHYFDYIKN >gi|343387398|ref|AEM22888.1| TPR domain-containing protein, 2613580..2616432 [Brachyspira intermedia PWS/A] MKKILSIIIISIFISLSSMLLAQNAAPNDERNIDREFYNAEKLFFQKKYNFAREAFLLYLKRRPLSTNDMLYYYIGACYFQDKQYENAINYYKLAFDINDSYSYCNNIANSYYQLKNYEDALLWYNRSIERLHSPYTTKLNHEVLTNYTVSQNVVTNTIFIFDVNNTSSNESATNIAIGSNDSLTNTFISTNISTAPITTNTVSTNLSSDTNAISDAINNQNIANENIKNTLDNTFTKLPLFTNVVITNTYTNNYEFTNTTVIFEANANFNLEVVNPSVSETALPPDSVTNEAVAGDSNTVTMSTNSTVTGSTYVITEENPFIVTNIVIMTNVMDTNGNMVEIKTNIASVDAYNTWALYYSAYLNMGHTFLALGEITNAAISYEIFLTNVGGDYYQKESLERVISLIRSNDTSIKFMPFTNNHRVNTNNDGSITTENIFPNFDYERETIYPNGVRIVYENGKIEKTKMYSNNYEVSDTIYPYGKREIETVFENGDKRLETYMSDNSKSINTKNSAGDTFEYTLYPDGSFINRKTLDSNKAFVVERSDGSITTNYKDNNGAFFYTRSLDGTEVKRTEDNLGNITTETKRVDGAVIVKTENPDGSYVVVANYIDGSIGTTTVDTNGISNLKIVYPDGRVEERNSTGAGAGTFSYNVKSDDGSIITKTYNEDGSFTVVTKKVDGTVITDTVSEDTISEIKMPDGTTIKRVIRQDGSRETTTLNRDSTTVTEVVAADSSSITTTIKPNGSSIVVVKDIQGNTETTTTEADGSTSTTKTYTDGRSTVNEVRADGVSIDIENDGRNKTTVARDAEGYVLEMKQYRNEDPEITLLDSLGEPVEAEIAKTVIRRMDLNIRVEDIDNLKLPPPPPEPEPVEDTTVTDDTTTTGDTTTDGTTTGDTTGDTITDGTTTGDTTGDTTTDGTTTGDTTGDTTTDGTTTENTTGGTTTSPTTTE >gi|343387399|ref|AEM22889.1| formate--tetrahydrofolate ligase, complement(2616953..2618614) [Brachyspira intermedia PWS/A] MKTDIEIAQECKLERIEKIAEKLNLTDDDYEVYGKYKAKIELSLLNKLKDKKDGKLVLVTAITPTPAGEGKSTVTIGLTQGLNKIGENAVAALREPSLGPVFGIKGGACGGGYSQIVPMEDINLHFNGDFHAISSAHNLISACIDNHIKQGNELKIDVNKIVFKRVLDMNDRALRDIVIGLGGSENGVVRQSSFQITVSSEIMAILCLSNSLMDLKEKIGNVIFAYDINDNPLRVRDLKVEGAACTLLKDAIKPNLVQTLENTPVIVHGGPFANIAHGCNSILATKMALKLSDYTITEAGFAADLGAEKFLDIKCRLAGLKPNCIVLVATIRALKHHGGASDINKEDLEALTKGFENLDKHIENMQKYNVPVVVAINKFVSDTDKEVECITKHCESKGVDISLCEVWAKGGEGAIDLSHKVLKAASEESNYKPLYELEKSIKEKIETICKEIYSAGEVKFSNKALKMMKKIENMGFGNLPICISKTQKSISDNPALLNAPKGYTLNIDEIKLASGAGFIIAMAGGIIDMPGLPKIPVACNIDIDENGKIKGLF >gi|343387400|ref|AEM22890.1| Gfo/Idh/MocA family oxidoreductase, 2618819..2619781 [Brachyspira intermedia PWS/A] MDKVNISIIGVGRMGQFHLNVVSQINQINLSGIYDADENHLNEISQKHNIRKFNSLDEAIDNADAVIIASPTMYHFEIAKKAVEKGKHVLVEKPMTETYAQALELEEIVKQKNVILQVGHVERFNGAVQELHHIIEKPYLIEARRLAPFTPRITDVGVVFDIMIHDLDIVTSLVKKPIVRFSASGKRIRTNNEDIASALLEFEDSTIATISASRVTQEKIRTLAISTEEAYFILDYATQDITIHRQAASQSNIKTSVGINYKQESIIERVFIHRDNPLKLEDEHFANCILGKDKRFVSIEDDVNTIKLTEAILKEIKKTW >gi|343387401|ref|AEM22891.1| hypothetical protein, complement(2619877..2620503) [Brachyspira intermedia PWS/A] MGDMMKILRYIFMVNILFFNLFTIVHAEENKEDNEKKGFQSVLDNRFFSIGLFSSADSIKTTVNIEFGFKIIKYNNFQIKSYTAVTGSKIYDDSPQMYQLGLMQKFTFGNNDEYTGEIGISRYGFAFFSFGFLSFDPDKSGKFLFASPYYWEVGGGAGFNINVSEHVAIVLEFGGGLHLVPEGKELGYPEKINKAGFGRMSVGGRYYF >gi|343387402|ref|AEM22892.1| conserved hypothetical protein, complement(2620569..2620967) [Brachyspira intermedia PWS/A] MRILFICLGFIFVGIGAVGIVVPILPTTPFLLLASFFFAKGSKRFHDWFMSTKLYKKYLESFVKSRAMTLKAKLTILLPVSAMLIVTFIFVNNLHARIVLVILFIAKYVYFFTQIRTIKEGEETAELEESNK >gi|343387403|ref|AEM22893.1| hypothetical protein, complement(2620977..2621399) [Brachyspira intermedia PWS/A] MKTTNMKVIERYEQNNSLKIKRKIDYEKNMLLYMIKLYCRHNHKEYHKNYNKTFGSKNICKECEEVYNYACERTSKCRFISTKTFCSACSSHCYKKEMREKIKNIMIFSGKRMIFYSPVIALKHVFVMFVCNMKKNIKKY >gi|343387404|ref|AEM22894.1| variable surface protein VspH, complement(2621474..2622778) [Brachyspira intermedia PWS/A] MKRLYFILAALLITAYSAFSYTVVEDFNDFLVDENQLTIRLDRLGVLAGTENLRFMVGVSGETAGVLLDNLDSGTKGGINTFRPAAIAGFGYKTESFGIGLGYQFKYVSGSWQAHTPIITATALNDNLRINVPVTIGVGSGNVNEGDIAVSTDTRIEYYTGNNIFSRIRVNLKYGMYRLKANESRSGDLTGGGNLAGMGTVGENGKYGFIKDTIGQSIGIDVRGYFIAATDPILIEPQIRILYQGSIADFTGTSYKVTPPGMDSKEGGAGFGLYNIDASNPIGAFELGSTGSIPSAPYYDFTAHNIMFTGEGASIEIGGTEYYITKPQFIGVSVPVGFTAESEFITLYLEPALSFSMITGGINAYASSAKPVRIPPLFYSVGYLVYGELYITPKPNLEWYFEAQIGSATTIDSIGDSKQGGLAFNGSTGITWKF >gi|343387405|ref|AEM22895.1| hypothetical protein, complement(2622874..2623539) [Brachyspira intermedia PWS/A] MKYIIILFIITNIIYSYESKEINNFYNEYYSSSYNIKSIENNTSKTYKNIYVLITSKSITNEKEKYNYLKEAINDNADYIKSEDIDYLISISELMSYIVYYSGLSEKISFGSKSKEIYKKILEKDESNFFALLGTAIGYMHAPAIAGGSNKKAFEYFNSALNNSKEKYQKYLSYVWLSQYYFKIKDNENYNKYIEMSKKIYPNGKLLEEAIERNNTKNKPL >gi|343387406|ref|AEM22896.1| conserved hypothetical protein, complement(2623647..2624321) [Brachyspira intermedia PWS/A] MLTYYIRRLFYGKKILLSFILSSILSINSFNLFAYGGSFEISLNVPIGAAIGTPNDAMKALGYKSKKSIDSGLEIQVGYMHKIYNRIGAGLFLDIGYTYDSFASSKTLTDNSIIDTSMYIHNFEIGFMPKFTVWGFSIAVGGGIKIPMAGKKDLEYGYSASVMHYFKMTLDYSIFVTDNLAVVLGLYLSHDYGLPLRSLSETPRIGGSGGGAFIGFKYGSKLSD >gi|343387407|ref|AEM22897.1| glycine/serine hydroxymethyltransferase, 2624553..2625980 [Brachyspira intermedia PWS/A] MAVSKKKAAVKSSSKKVSKAAKKTVVDKKAASKKAVNVKKASKPAEKKVVAPKYYVSETPLKSADKEIFAAMKNEYKREVNGFELIASENIVSRAVMEAQGSIFTNKYAEGYPSKRYYGGCSEVDIVEDLARERAKKLFKAPFINVQPHSGSQANMGVYMAVLKPGDTCLGLSLDSGGHLTHGKNVNFSGKIYNFQHYNVSKETMQIDYDELRDTAKKLNPKLIVAGGSAYPRFIDFKKFREIADEVGALLMVDMAHIAGLVAAGVHPSPVPHAHFVTGTTHKTLRGPRGGYIISTEEDLAKKIDKTIFPGIQGGPLMHVIAAKAVCFKEALDPKFVKYQEQVVKNAEAMANMFLAKGYELISGGTDTHLILVDVKKSKGITGQLAETILDKAHITINKNGIPYDTESPMVTSGIRLGTPAITTRGLKEKDVMELTQYIDEVLSNSNDEKMINAVAKKVAALCKKFPMYKFIADM >gi|343387408|ref|AEM22898.1| HAD-superfamily hydrolase, subfamily IA, variant 3, complement(2626069..2626734) [Brachyspira intermedia PWS/A] MMSKNIKIKAAIFDFDGTLVDSESLYTKALIHVSNEMNVLKEVDFKSLAGYQTKDIDNILKKEGYHIPDNFFKEAEVYFHKIIETDLETFDGVMETLEKLKNINIVIASNSNINYVTRMSNKKGISKYIKDYSCYNGELKAKPAPDLFLNAFELLKKLDNNIKKEDVIIFEDSLAGIIGAKKTGIITAAITNSYSKEILLENGADIVLNRIDEIFNYIEII >gi|343387409|ref|AEM22899.1| glucosamine-6-phosphate deaminase, 2626904..2627662 [Brachyspira intermedia PWS/A] MGLKLIIAKDANAVGKKTAAEIINLLKVKKDAVLGLATGGTAEAVYPHLIKAYEKKEIDFKNVKSVNLDEYKGLDPKNEQSYRYFMNKNLFDHVNIDKKNTFVPKGIGEKEKILKEFNDKINKLPRDIQLLGVGPNGHIAFNEPDEALHADALCVKLDEKTIKANARFFASEKEVPKEAFSMGMGGILKAKKIVIAAIGKGKAAAMKELLTNDKVTTKCPVTFLKLHDDVVVVIDQELADAIGLEKKKGCKK >gi|343387410|ref|AEM22900.1| phosphopentomutase, 2627870..2629030 [Brachyspira intermedia PWS/A] MNKKKAVLIVVDSCGVGALPDAAVFGDEGVNTLAHLAKANGGISLPNMEKIGLGNIIDIEGVSKNNDTIGYYGKAMETSKAKDTTTGHWEIAGLVSEKPFNTYPNGFPEITLKKIEEFSGRKVVCNKPYSGTEVIDDYADEQLKNGSLIVYTSADSVLQIAAHEEIIPVDELYSICKKALEICNEYSPVARVIARPYIGTKGNYKRTERRHDYSVPPSGETMLDRLKNKNLPVVGIGKTSDIFAGVGITENRQTNKNNLDGIEKTIKAIKEIDEGLIFTNLVDFDMLYGHRRDPKGYKNALEEFDKYIPEMIENLNDDDLFIITADHGCDPTYKGSDHTREYIPILAYGKNLKKNVNIGVKDSFVSIAASIEKHLLGDTKLEGCFL >gi|343387411|ref|AEM22901.1| putative UshA protein phosphodiesterase-like esterase, complement(2629584..2631086) [Brachyspira intermedia PWS/A] MFSYSCSNSTVKKTGNTGNLTIIHMNDTHGKDEEERVVNKDVTNYMYGAARRASYIKQVKATNDNVLILHAGDTITGSIYSTVFQGRDEVDIMNMIGVDAATVGNHFVDFGLSNFTEIMKERKFPTLSLNIKNKADNSYYATPYIVTNVNGLNVAIIGVTTTDSVYSPKNIVDLIFEEEIKSLKDFLKQTPLNTTNDVTILLSHVGYEGDKKIAEAIPNTFDIIIGGHSHTELDKADVVNGTPIVQAGSYGHYLGHINFNVNNGIVDKNNLDYKLVAMDQTIEQDKDMLAFIDEMKGTVDKEFNVRVGTLPMDLAHDGIRSNSMPIGNFACDLVKDSYENVDIVMINSGNLRSVLKSGDITLGNIQNEFAPFDNEVIIVSLNGKDVLDMIKLSGQKRGNGGFLQYSKGMEVKYTANGELISAKLNGEDISEAKDYSVILSDFVFDGGDGYVDAENNPIGRKGKNVVHTGNDIRDALIAKIKEFNNIPADYIDQNPRVIFE >gi|343387412|ref|AEM22902.1| spermidine/putrescine transport ATP-binding protein PotA, complement(2631268..2632470) [Brachyspira intermedia PWS/A] MKKKLFAVFMLIAIVANAQTVNLSRFDTNYYHKYKGQNLSVNVYNWGEYISDGSDGSLDVNKLFEELTGVKVNYSTFASNEEMYVKLKVGGIQYDVIIPSDYMIERLIKENLVRKLNFKNIPAHTNIANRFKNLPFDPTGEYSLAYTWGVTGIIYNKSLVTESEDMIDWKILFDKKYQGQILMYYNPRDAFGIAQAYLGYSLNTTNESELRECAKLLKTQKPLVQSYVMDEMYDKMEAGEAAIGVYYAGDSLTMIDNNPDLNFVIPKKGANLFVDSICIPASSGAPELAEMYINFLSEPEIALANIEFINYASPNDGAIAIMSDETRNNRIIYPDQTTLDNCEVYITLPDETNILMEDLWNEILSNDNTYKGWVIPVALGVIVLLCVVIIVLKKMKRREN >gi|343387413|ref|AEM22903.1| spermidine/putrescine transport ATP-binding protein PotA, complement(2632501..2633310) [Brachyspira intermedia PWS/A] MIKKILSGSYIAFIFLFLYAPIAILIFFSFNKARGRGVFTGFTLNWYKELFSNDLILHSFFNTIIVAAVSSIFATILGTMAAIGINSFNKKMKSAVMGITYISIINPEIVTGISLMLLFVIMKLKFGFTTLILAHITFNVPYVILNVLPKLRQQDNSLYEAALDLGCTPSMAFWKVVIPDILPGILAGFLMALTYSLDDFVVSYFTTGITSQTLPITIYSMTRKRVSPEINAISTVIFIVVLVSLVVMNLKEIKKEKYLMQLKRKINKH >gi|343387414|ref|AEM22904.1| spermidine/putrescine transport ATP-binding protein PotA, complement(2633323..2634141) [Brachyspira intermedia PWS/A] MKTKIPAIPYLIWTLVFVLVPLFLVIYFAFTNQRGDFTLNNFANVTGFTPVIVRSVILAFVATLICLILAYPLSYYISRQEKTVQHALIMLVMLPMWMNFLLRTYAWMTILENNGLINKMLMFMGISPVKLINTQAAVLIGMVYNYLPFMILPLYSVMTKIHQSLIEASQDLGADSFNVFSKVIFPLSLPGMAAGVTMVFVAAVSTFVISRMLGGGSNILIGDLIEMQFLGMSYNPNLGSAISLVLIVISLCAIMLMQQIDDEDEDVKGMFL >gi|343387415|ref|AEM22905.1| spermidine/putrescine transport ATP-binding protein PotA, complement(2634138..2635178) [Brachyspira intermedia PWS/A] MSLKNINVSYDENSILENLNLDIKDKEFLTLLGPSGCGKTTILRTIAGFIKPNSGEVLFDGKVINDTPAYKREVNTVFQRYALFPHLNVFENIAFGLNLKKVPKSEIKDRVHQMLKMVNLENYGNRNIARLSGGQQQRVAIARALINKPRVLLLDEPLGALDLKLRKEMQIELKKIQQSLEITFVYVTHDQEEALTMSDTVAVMKDGEILQIGTPEDIYNEPKNAFIADFIGESNIIDGIMHDDYVVEFAGYIFDCVDKGFEKLEKVDVVIRPEDIIVVPPENANISGLVESAIFKGVHFEMVLDAHGYKWIIHSTEKWEAGTEIGIDIAKENIHIMKKTVEEVII >gi|343387416|ref|AEM22906.1| hypothetical protein, complement(2635537..2635923) [Brachyspira intermedia PWS/A] MMKKLFLFTLLVSSFLVISCSNKDTTGSTVTGIDSSYLGTYTGKMKYDTASSLEYQSTLVVNNDGSASFTVDTIFDNLNIPKADITKTGEGKYTANGIDFSFTGSSVTIKITLPGSTPSMSGTLTEQQ >gi|343387417|ref|AEM22907.1| hypothetical protein, complement(2636060..2636470) [Brachyspira intermedia PWS/A] MIKKLFLFTLLVSSFLVISCSNKDTTGSTEEKPIGTGIDSIYVGTYEGTIYNPDPTTQSMTFTLTVNADGGGSLKRVSNPTVPNDINKVFFSTDIDKYSDTKYKFKDNIFQLDFNNDKTVYLTFEGTDPITLTWKP >gi|343387418|ref|AEM22908.1| hypothetical protein, complement(2636648..2637076) [Brachyspira intermedia PWS/A] MIKKLFLFTLLVSSFLVISCSNEDTTGSTGTETRVGTGIDLKYAGEIYEALNVQKKNGTVLSVLRITISNDGGYKLFYVETSDANTYNGEVVPKEIFKVSDTKYNTEFFGEVTRTFEFASDGSTLTLHEPNSYNEDIVLTKK >gi|343387419|ref|AEM22909.1| hypothetical protein, complement(2637194..2637589) [Brachyspira intermedia PWS/A] MIKKLFLFTLLVSSFLVISCSNKDTTGSTGEQPIGTGIDSKWYNTYSGSISDKTTGEKIPVILKIDSTGVTITMNTIPFPTLPPETIVKDSDTQYHTLTTTDNNFTFVFDDGGVTFSVNPNVGSGYLTKQQ >gi|343387420|ref|AEM22910.1| hypothetical protein, complement(2637723..2638115) [Brachyspira intermedia PWS/A] MKSNIFKFLFVLSLLSFLSVGCGVKDILGLGDDNGIDQEYIGNTYSGKIDSNKSGTMSATITVNSDGSFTLYLGSSYTKFEASNIKNNGNGQYSGIQGVYSFSLEFTSSSVYVSLYNFSDTESIKGTLVR >gi|343387421|ref|AEM22911.1| hypothetical protein, complement(2638219..2639292) [Brachyspira intermedia PWS/A] MVINASYKNIFNFFIFAVSSIAFADITPKFGIKNSFNYIDLKESQYIPNSILSNDTYFYLGFEYLNNNFYFSFKPAIRIYTKDNRELIYDNGNLIKQHDNKAYLSFTFDEIQFNYINEILGFYIGKRKFHFGEGFNRQYMFVGESVLYNDYEALYNTELNFYQGNITHSIGFITDTKSIDLLKEPQYYTSWYYLKYSSSHLGLMGITKYTYDLQKQNNLMLGFEASYIFDIGFKLYGNVTYNILSSNNLGKSLNDIKSLLGINYTFIYNYDFILSPYVEYFYEDSHSFYSIGLYLSFLNNLFNIITYFSHSPNYKMDLNTKLLINYNNFSFTFNYYTPFKSNEILEHAFEISLEYNY >gi|343387422|ref|AEM22912.1| hypothetical protein, complement(2639305..2639985) [Brachyspira intermedia PWS/A] MCKKIVKILFIISILSFNLYSQNIFDDFVKIYNRDGKSYKMSGTFTDIKDGKKKVNNFDMIVGKNYKLMYLKNNNTLFLANDQGYFVQSKNQVSPLKISGSYVVTGAANMNDLMSINFTDDYKIEKVVSDEEVNLVKKNRSVPYAKATLKKIAGGYSIDFFDNSGKALKRGIYKIKDNYFNDMEFYNLIINTNTSTVCNISKTEPSSSSSSYFRSENMKMLFGLFK >gi|343387423|ref|AEM22913.1| hypothetical protein, complement(2639978..2641195) [Brachyspira intermedia PWS/A] MNIIKLAFDNLWYNKTRTILNMILIIVSFVSLMMISGYNNFTKEGIIISVNTSGGSVVIADKSYWDTKSEKINMLNNNDFEAIYKKLDTINEINDYQKKLDISGLVGNESKSKFFSGYAYEKSSKIMSSVSLKAGTPIFDDDIDTMVLGKDLGEFFNINYDDTPYLNLMTDFGDGINLGSLMAVGSISLNNSASDAITLYCPLNAMYEVFGLEYGNAHNLLVYLKDYKKATEIKNSLNKYFNENNLNYEAKDWKDLNAFLLSVIDMNTNNYLIALLILSILVFVSVMQMLTTNFLERLNEFGTMRALGINIKNVTLLLFLEIIIMAVLSSVISIIISYGASGILNASNFVMKFPGATDGYALSLLLTFKDTVLIFAWVLSVSILAGIYPIIKVIRMPIIEVIKYV >gi|343387424|ref|AEM22914.1| ABC transporter ATP-binding protein YbbA, complement(2641492..2642163) [Brachyspira intermedia PWS/A] MIRCESISKIYKTKDYNITANKNISLEIKDGEIVWVAGVSGAGKSTLLHILSSIDIPTSGSVYWNDNEVSKLSDKERSSFRLSNIGLILQSLELLKTQSVFDNVALPLKFLNESSSNINKKVNEILENLKIDNLKKKKPEQLSGGQKQRVAIARALVSEAPYIFGDEISANLDTETSKFIYEYIRNTIKKRNGIGFFISHDELIEDYADKKYIMRDGGIILNI >gi|343387425|ref|AEM22915.1| hypothetical protein, complement(2642166..2642939) [Brachyspira intermedia PWS/A] MIVLIFINVFFLCGLYGEISSEANSILKEIDNKNNEYHSGARLVRTSEAKDILNRVNNSNLREEEKMHLSIECYTLWANVSIANGTFEEDYKTLGEIYNNLKKDKVFKKGSSDIYASFANFANSFTSLAFFNNKYPYSVIVDMYTYARMALLKDKNNIRAKQVYGMWQIATLGFYNNAAYYSVISSLNDTSNLPDYMVYRAYIYRSMAYMKVNETDKAFKELDEALKMYPKGFYGYLLKSSYDKGKDGFLSAEGSDF >gi|343387426|ref|AEM22916.1| hypothetical protein, complement(2643060..2643782) [Brachyspira intermedia PWS/A] MMRKILTVLFLSLVLTISAFSYSKEFNELYNLYYMANTNKADDLNLAIEKMKKANVGKIEKQTYDNLILLMDIYMNPRSKREAYKLLNDNIKKNTPLLSEKDADYLSSVADVMSGAINYSSFNDVIKLSGKAGEIYDNALKINANHFPSLLGKAILTAYSPEFVGGGIDKSLPIFKKAENSAKEKWEKHIVYLWTSQAYFKNNDKANYDKYMKMAKDIFPEGAFIKNIIDMNAKGKGMFN >gi|343387427|ref|AEM22917.1| hypothetical protein, complement(2643818..2644408) [Brachyspira intermedia PWS/A] MPFLRSFNLLKIFFILPAFLYSPIYSIGIGIASYIFLLAFSIIKLLPYLNNLVLVFLQTALRNSANVLINILFVVLASLLIYFFKKKALKKGIDINISMALTIAVIITFLELIVSTFYLLIYSKDNVSNYNTIIMEHSFFYINSMIFTFIAVIVSYFIYMKIKDKAFFANNLNNNENNQDNDNNLNKENNVNNINE >gi|343387428|ref|AEM22918.1| hypothetical protein, complement(2644502..2644657) [Brachyspira intermedia PWS/A] MVNNITINNDLIIQQLIANVVSVIFTFIAVMISYFIYIKIKDKPFFCDVKA >gi|343387429|ref|AEM22919.1| hypothetical protein, complement(2644744..2645142) [Brachyspira intermedia PWS/A] MGSIKNKIIFSFLCLIFYTALGLSFYLIPFNSELLNIIAVTCITIFSVFFILPAFLYSPVYSIIIGVLHYIFFRMFEIIRIFTKLDSTPVTLIYLIFQSAFGIIINIVGIVLTCLTIYFVKNILKINVLILI >gi|343387430|ref|AEM22920.1| hypothetical protein, complement(2645163..2646158) [Brachyspira intermedia PWS/A] MLLLFFILSSFLFAQNDFVNSGFHYSYNYFGFPFSVDFGYAYKKNSHFIYVPRVGISFDYGAESSFGIFANVGMEYRYRRFFIDLNYKQGITPPFATFNYKDLEYYGQLKLGYSFDNVSIYYGMNIGKMLTSEREVYRLSSIFKINQSIGLSSTFVDDGVNKLKFNASVGASIIPNEKQYSYNVSASMPYSFFHYWGELGIMPYIGYSAYFDKSEKKYSIGFKYLYSLMMMPLSNLEAHVKNMDFLTFAHFEYKFFMRFLPSGFNDIYLVAFGNVGYGKYFESSIDKGNLLYVVGGGIGYNLYGTTPLQLTFGVDNNNSLVMNLIISAIMF >gi|343387431|ref|AEM22921.1| hypothetical protein, complement(2646604..2647272) [Brachyspira intermedia PWS/A] MMMNINEFYKNIKKKYPNTKEVLEQLDEIKDMLNSKVQHYVKNGMKYEEACSKSIDELGNIDEVFEDISKDAKIVHNLYIKILTALISSFSTALLAFIVGLIVNNLSFFNETTKIGYKLTMPYFYLVLFIYIVIYSFWNFSDNIKPKIRKYSYDIYKINLKNSIIAVIIYSVIMIIVNIITYQYNNYLWFIWAFNGILNWTISIIADYHLFRSRIFEYTEKF >gi|343387432|ref|AEM22922.1| hypothetical protein, complement(2647523..2647918) [Brachyspira intermedia PWS/A] MIDDFCNELKNKYPNTQKIRDQIEELRNYLYMKSEEYINDSKEEAFKKALKSFGDVDSLLEELSKDTKIVNKYRLYLFVGTIDIVIVAFLSLLLCFISLKNNYISFFSYINNSLIASIFFIISGIISIFYL >gi|343387433|ref|AEM22923.1| transcriptional regulator, PadR-like family, complement(2647942..2648271) [Brachyspira intermedia PWS/A] MYIESDIIRGHIDAVVLHFLKDNDSYGYELSKLITDKTNGEYEINGQTLYSAIRRLEGKKLIESYWGDESQGGRRKYYKITEEGKKFLQEEREIWLFTKKIIDKLLDIE >gi|343387434|ref|AEM22924.1| ABC transporter integral membrane type-2 domain containing protein, complement(2648755..2649447) [Brachyspira intermedia PWS/A] MKKAIRDPFLIFWSIFFPLVIVISLGLFFKMESYTVHILTAMSCVSVLAYSFMTTSFNVLSQRRRGVYNLLKVTPLPLYKYIISLSCAWVIISIISCLFVFFVCALFFKLEFSFASILLFLPVIILASLLYIFISFFVSSLVKNNETASILYNIILMASMFLSDGYYSLYNAPNIVKILSKLNIFQYFLNAFRGAFYFDFHAYFIGIAVLLVCLIIALMLAVNTFRYADK >gi|343387435|ref|AEM22925.1| ATP binding cassette (ABC) transporter, complement(2649794..2650486) [Brachyspira intermedia PWS/A] MEILISARNIEKKFNNNVILKNVNFDIHKGEIIALVGPNGSGKTTLINILLGILKADKGELKINIDNYKKHIGVQLQSTPFFEGYSVRDNILMFSALYDIKMSNEEIESITKKYGLNPKTPAIKLSGGEQKKLAIMIATMQNPDLLIFDEPTASLDPRERYNVKNMLLELAKNNKTILFTSHDLEEVEDLASKIVFLYKGEILESGSKEELLNKYNFDSLEKLYLHITNY >gi|343387436|ref|AEM22926.1| hypothetical protein, complement(2651013..2651645) [Brachyspira intermedia PWS/A] MNHSRLEYNEMYVYVSTYIYWLLMIIFAVIISLIQKQNILLYLYIERKYIIYIFINIFAVISAFELIMSVISLINKDIRVNTIFNNILLVPSVDMLYSSRSNPKWTLIMFASIIKCLFFNGVIYSAVKMQFSDYGIFFTIFIVSMLFSLEEILRVNSIKQALIFTIACFVVITINALTFEYSGSLIPSVFANISFTLYYFGQFENISKYS >gi|343387437|ref|AEM22927.1| CAAX amino terminal protease family protein, complement(2651750..2652370) [Brachyspira intermedia PWS/A] MAISFPTSLIGIFYKLNFGRINTILPNSLSYLLFVIIVFFTGYIGSINYNISIYFVILSFIMSFVCIGIEIFEAMLIHFFKYRFWIKNIEVHEIIEKKNILFDIIIIFIGALCEEIIFRQVFFNITYNVFGINIYIVIILSAFIYSINHIYFGANAVFQKFIVGIIYSLLFVYSSFSIIAPVITHFLQNFILYILSFRRNKREALN >gi|343387438|ref|AEM22928.1| streptolysin associated protein SagD, complement(2652387..2653733) [Brachyspira intermedia PWS/A] MIKYYPSHKNILNKYNSICGHQTGIMDSLIIMQANSVIAENINTCTAMLPDYHKILLGDNAEVNYHLSGYGIYRDEAIIRLLGEGIERYALFTANLYFEEKLKYASYNQLKEKYPDNIIPFEYVKIYSDEDCNKLNSIGILENITEDDILSWVLLPSLFDKEKEYYVPAQNFFLSHIIRRDKKEKIFIGGFSKGSASHKSIPLALKSAITEIIECDSCMIKWYTDSKVKEIIIDDDILNEVINSILKDIDYNVRVFDYTVDKKLGYVFTVMLENKNEKSPYIVVGASSGLNPRKVIYRAFMEALAILTLNINGPLSMPADYLETVSPKNYLNLDSNVNYWADAENKDKNLKFINSKVQDKIELKKYKNLEVNTESDLEYLLKGLYNVSKYAVYLDITPSEISDKDLHVMRVYVPELVQMSMPAFPYSKHPRIIDNGGISNNEFPHPLP >gi|343387439|ref|AEM22929.1| putative streptolysin associated protein SagC, complement(2653945..2655039) [Brachyspira intermedia PWS/A] MAKKNIKLYDNVSIFFNSDDEIRFRKGIWNFEEASLELSDLNDTIKEALIFIAKELFDDKLISFDDIVKKFSLNDKDSNFLNELISSLIGNRFLEYDDKKNNMLNTVYEFIGEYFYDIPDESKVQKNKIMFITDNDRLKEYAKLTSEDLYMNVIMMNADDIKKLEKANLTDTTDAIENMEKHKELIKLFDDISCVVVSAEKPRLNLLRNINRLLLDKSIPIVISILDGPFLNITTIKGKETGCYECFENRVVARNESLSVYNKFVKQTMNFKSNGKRTYITPILQTFTSLALYEAFLFATIGKCKLAGRVINVYIPLLEIQIQDLLRVPFCPACGNVSKAKYNEMYTSSKEIIENFSSKVILKL >gi|343387440|ref|AEM22930.1| streptolysin associated protein SagB, complement(2655093..2656106) [Brachyspira intermedia PWS/A] MKAKDKNLKNKLKKIEVSKEELEAKEIPLLFSVVNFSSNIPVSMYADTIGIKTSESSYRASMHSEVNRNISEEYLLNSKKSSIDLSTMLDVVGYSSFPIDASLSNRILLEEEVHKKGNAVKLPPYKNINAPIGSVIRSRRSRRDFKGKPLTMVDLSNLLYYGDGISGDFDFNLNKNEYGTITFSDKYISKLRTAPSGGGLYPIYLYIAALNINNLDKGIYKYMPFTHSLEKIKLFNDEDLENYYNNNVFGGGIDLRKTALSIYYVYSIYENSRKYGDMGLQFALIETGEIAQNIQLTAAASGILACDIGGFNKTLSEDLLNIDGNTNHVVHLTLLSK >gi|343387441|ref|AEM22931.1| Glu/Leu/Phe/Val dehydrogenase, 2656442..2657506 [Brachyspira intermedia PWS/A] MEIFNYMEKYNYEELVFFNDSKTGLKAITCIHSTKLGPSLGGTRLWNYNNENEAIEDVLRLARGMSLKSACAGLDLGGGKTVIMADPKKVKGNELFWRSYGRFIESLNGRYITAEDVNTSTEEMEYVAKETNFVAGLRSKSGDPSPMTAYGVYMAIKASALKAFGTDNLGGKKISIQGLGHVGLVLCDYLAKDNVHLFVSDIDNDKVKKAVELYKAKEVDVNSIYEQDVDIFAPCGLGAIINDETIPKLKCKVIAGSANNVLKESHHGRILKEKGIVYAPDYVANAGGVINVAMENPTYNYEAAKTATEKIYNRILEIFEISDRENISTNEAADKLAMQRIESIGEIHSRYIRR >gi|343387442|ref|AEM22932.1| hypothetical protein, 2658028..2658702 [Brachyspira intermedia PWS/A] MNTIKTMIIMLILASLLYSYNSKDINNFYNAYYSSSYNIKTIENNNSQTYKNIYSLIKAKTMTNDKEKYNYLKEAINQNKDYEKSNDADYLISVSELMNYIVYYSGLSEKISFGSKSKDIYKKILETDDKNFFALLGTGVGYMHAPAIAGGSDKKAFQYFNDALSNAKEKYQKYLSYIWISQYYFKTKDEENYQKYINMCKEIYPNGELLKEALDRNNTKKKTL >gi|343387443|ref|AEM22933.1| hypothetical protein, 2658840..2659247 [Brachyspira intermedia PWS/A] MRILFISLGFLFMGIGIVGVVVPILPTAPFLLLSGFFFAKGSKKFHDWFISTNIYKKHLESFVKSKTMTLKSKLTILIPVTIMLSIAFIFINHLHARIALVVVLLIKYIYFFAYIKTTKEYSESIETNIELDKEN >gi|343387444|ref|AEM22934.1| hypothetical protein, 2659306..2659869 [Brachyspira intermedia PWS/A] MSLFEIAYTEEDKKNKLLSGLDNRFFSIGLYSSADTIKTSVNIEFGFKLFKYNNFEMKSYTSIVGSKIYDDNPDMYQLGFMQKFTFGNKDEYIDKITIARYAFTFVSFGFISFEPDKSGKSLFARPFYWEVGGGAGFNINVSKHVGIVLEFGGGLHDIFNGKSLGYPKKLNMAGFGRMSMGVRYYIY >gi|343387445|ref|AEM22935.1| transcriptional regulator, TetR family protein, 2659983..2660456 [Brachyspira intermedia PWS/A] MRSLAEASNIAVGSIYNYFKSKEELTIEVIGSVWMDIFHPLNVCLESDNFLDIVDTIYKSLEKGSKKYPSFFSMHSTMMFGKNKSKGINMMNMIKKHIKEGLYKTLMNDKKVKEDAFNDNFTADKFIDTIFSFIISSMINADYDGSMIKEIIKRTIY >gi|343387446|ref|AEM22936.1| ABC-type transport system , ATPase and permease components, 2660486..2662234 [Brachyspira intermedia PWS/A] MINKRLISLMGNAKKYIAWHVIIQLVNLALNITAVIFMADIIQKASQGNVLKEDILKLAIAIFVIIILRFRFNILMANMSYHASGRVKQTLREKMYSKLLTLGSRYKEKFSTSEIVQISMEGVDQLETYFGRYLPQFFYSMIAPIVLFCVLSTISVKSAVILLICVPLIPISIIAIVQIAKRILKKYWGSYSDLGEIFLEDVQGLTTLKIYKADEKKNEEMNIEAEKFRIATMNLLFMQLNSTTIMDIIAYGGAALGVIISVLEYMKGNINLAGTFTIIMLSAEFFIPLRLLGSFFHIAMNGISASDKMFEILDMEEDDKRVNNINKENEEITFKDVSFAYNENKTILKNINMTIKEKSFVSIVGVSGSGKSTIAGLISLKNENYKGSIKIGSLELDTINKDDLYKKIVVVDHNSYLFEGTVYDNLKMAGDTITENQMNEALKKVELYDFLQTENGLNTVIMEKAANLSGGQRQRLALARAILFNADIYIFDEATSNVDVESEESIMQIIRDIAKEKTVILISHRLYNCIPSDHIYFLKDGIIMEEGTHNKLMSLNGEYAKIYNEQSNLESITKSESLSIAI >gi|343387447|ref|AEM22937.1| ABC-type multidrug transport system, ATPase and permease components, 2662283..2663935 [Brachyspira intermedia PWS/A] MRRSGIKIMAQLIGLITPLMHVMILAITTGVLGFLCAISITIFGGYAILTYLGLDSLFTIKTIFITVLVLAALRGILHYIEQLSNHYIAFKLLALIRDKVFKALRKLSPAKLEGRDKGNLIALITSDIELLEVFYAHTISPIAIGILTSLIMTIFIGSFNIVLGAIAFLGYFTIGFIIPYFSSKFGKNDGMAYRNNFGKLNSYFLDSLWGIKEILQFGYGEKRIQNIESKTDDLMDLNKKLKKYEGIISGLTTSAVSLFTLAVLIVSIMISKESNFAAIIIPTIAMASSFGPVIALSNLSNNLFMTLASGERVLNLLAEKPIVEEVYEGKKDISFNGVECEDVYFDYEGENILNDYNLEIEPNKIIGISGKSGSGKSTLLKLFMRFWDIKEGSIKISNTNIKDINTDKLRDMESYVTQETSIFKDTIENNIKIADQNATHEEVVEACKKASLHDFIMSLPNGYDTNVGELGDTLSGGEKQRIGIARSFLHKAPFILLDEPTSNLDSLNEAVILKSIKDNSENRTVVLVSHRLSTLNIADKIYKMKTDRVS >gi|343387448|ref|AEM22938.1| putative ankyrin repeat-containing protein, complement(2664161..2664544) [Brachyspira intermedia PWS/A] MLSKIIKKKDDENFDLKDHINKLLELISKSTEEEVNYADNKISCLHLAVQIDNADVVAALIAKGANVNAINERGVSPLHTAIIKNQPEEVIKVLLDNGADYNIEEANFSALALAEIMNVPYMHLFKK >gi|343387449|ref|AEM22939.1| glutathione peroxidase, complement(2664732..2665205) [Brachyspira intermedia PWS/A] MSIYDFNVKDINGNDVSLAKYKNKVILIVNTATRCGFTKQYKDLENIYEMYNSRGFEILDFPCNQFLNQAPESDEKIDNFCKLKYNTTFDRFKKIDVKGKNIEPLYSYLINNSNYLFNKDIKWNFTKFLIDRNGNIVRRFSSFSSYSAITKYIDKLI >gi|343387450|ref|AEM22940.1| nucleoside triphosphate pyrophosphohydrolase, complement(2665202..2665996) [Brachyspira intermedia PWS/A] MKSFEELISIIQTLRGENGCAWDKVQTFDSLIPCFLEEAYELVEAINNKDYENIKEELGDVLLHVVFFSELAKDENKFNIDDVCKNINEKLIRRHPHVFGDSNVKDVQGILKQWDKIKKEEKGTDGADEFKSVLDGIPKSLPIMEKSYKLMKKAASVGFEYEHIDDSLSKVEEELLEVKEAYKEQDKEHLEEEIGDLIMTVLDFARMNKINPVNSLIKVNEKFRKRFNYVEKTAYEMNKKLEDMSLDEMDQLWNEYKKKERENK >gi|343387451|ref|AEM22941.1| hypothetical protein, complement(2666009..2666533) [Brachyspira intermedia PWS/A] MSELVIYLIIAVIWGIVSLIQKATKGNKQNKKPKQKTYTQNNKKVNNKRFNDNKNEEQIFKELQRNIKNLKNYNEEVLRENTKREEVYTSSYETSNNDREILELQEKYNSKMSQINAIKEETVSSDFNNIRTSENKRQVNHMLSSLDIKNAIIYNAILEPRRINYMRIKKSKLS >gi|343387452|ref|AEM22942.1| hypothetical protein, complement(2666551..2666697) [Brachyspira intermedia PWS/A] MSNINLLLLIGFILLAVYSITTRIVNSRANKDKKENNNNYEEDNDSKE >gi|343387453|ref|AEM22943.1| flagellar filament outer layer protein FlaA, complement(2666842..2667492) [Brachyspira intermedia PWS/A] MFAQDAAQTGEQTTQNQGEDGNNFVTEAITNYLIDDFEFANTWQASMPRDYGVVSIIRREGGPADVVAEGAENNKYILGAKVEYFRTGYPWFSVTPPRPVKIPGYTKELSVWVAGRNHNNKMSFYIYDVNGKPQSVGNEALNFMGWKNITVQVPANVRQEEFRGQVEQGISFMGIHVKVDPKDSYGKYYIYFDQLMAKTDMYLETYREEDDPLDTW >gi|343387454|ref|AEM22944.1| putative flagellar filament outer layer protein FlaA, complement(2667572..2668294) [Brachyspira intermedia PWS/A] METRLLYNFETLDEWQPISNASRFMFRGDRTNENGVVMKYPNMRLFATKPYGMGNQSYNSTNSLSVSVSFFRKSYNFFDLVPTVQKIIPGKAQTFDVWVWGGNYDYTMEMIFEDYRGYTYTLPLGSIRYIGWRNMSTAVPSFIPQEEPYVPRAKGLRFMNFRFWSSPEERADNFVVLLDYFQTVTDTFREAYDGSDIETTLGQEVGGRSSEQYTEGGAKVVGEDGGTADTTTEQPQEAQQ >gi|343387455|ref|AEM22945.1| pseudouridylate synthase, 2668619..2669308 [Brachyspira intermedia PWS/A] MRLNKYIASLNIASRREADRLIQNGNVKVNGIVNTNPATQVDENDKIECSIEQYKEDKIYIKLNKPRGYVVSSNKNEGKPIYNLIKNDFDNIYPVGRLDKDSSGLILLTNDGVFAKQIIGENTNCEKEYYVRVNDSVPDGALKKLEYGISLDGQKLKPAKVKRVNKNSFHIILTEGKNRQIRRMCQKIGFEVIILKRLRISGILLGDLKEGSFQNLTKEEIDSILKSEL >gi|343387456|ref|AEM22946.1| hypothetical protein, 2669391..2670017 [Brachyspira intermedia PWS/A] MIEIAMAVSILSIIILFLIFLSKKQKDSSSKKDDDNQVNNSDKYIFNKITDQRLKYIESGNIKTKKVMNIEENKIFYSMVKILNNYNINPQVSFRAFLKGEEDTETWKTFRDFYCDFLVTYKKGSKINEPVAVIEYHGGGHFGDTENQKKKVENNDYVREKLFNKIGLKYFIIKDYDIKMKSGLIEEEKLNLFLNDINNILSNELKQN >gi|343387457|ref|AEM22947.1| hypothetical protein, 2670028..2670651 [Brachyspira intermedia PWS/A] MAIIALVLILFSILFLLSKSNYKQGYYKGYYRRNKYYKRHKKTEAERIQDITEQRLSNMETGNISIKKIMNIEETKIFYSMLNIFKDYNIYKQVSFKAFLDAEEDTDVWRSFRDFYCDFLITYKKGNKINEPIAVIEYDGAGHFGNTEDMKERIKNNDMIKELLINKAGMQYFIIKENDIKIDSKFIDDKKLESCLSDIMNSIKNDN >gi|343387458|ref|AEM22948.1| exoribonuclease R, complement(2671002..2672741) [Brachyspira intermedia PWS/A] MKTAEELIKKLMKNQMDYNIFIKFNSKTALEKTSLTNLIRKAISSGYIEKTAGNLLRVTKEGRQYINKLEGKEEAPKTVKSVRVNVDPKDAKSDSKIIAKSYNIKLDFSEELLKLAEEINNKADFTNIEDDRVDLRNLKTITIDSESSKDLDDAFSIEKTDNYKVYVHISDVSHFIELDSPLDLEARARGNSTYLIDTVYNMFPEVLSNNIISLNENEDRFAITFIFDINNEGEILSSSVCKSVIRSDRKLSYDYAEKLIKKEESDEDWLLELIDNGLNIKNILYKKRKEGRGVEFENQDIKIVLNDEGMPIEFYAEEKKESMAIIEELMLLANSQIAEKLSSYDGVIFRYHGLPDEYRFNNFKILAHTKGYNLKENPDKTYDIKGFIDNVKGKPEENLLIPVLLRSMTPSSYSIVNKSHFGLGLDYYTYFTSPIRRYADLLIHRIVKDTILSNKDVINEKLKNICKDSIESLSLLDKTSKKAEKYLIQIKAARYMKDRLGDEYYGAVSSITQKGIYVEIEGLEIEGFIEATYVGSNYRFYQDMQSVYVDKVKAYELGDRVKVLVASSNVENGKIFFSL >gi|343387459|ref|AEM22949.1| ATP phosphoribosyltransferase regulatory subunit, 2672909..2674030 [Brachyspira intermedia PWS/A] MNENDIVSKLTKIYEQYGYKKIKLSKFEDYNLYNNYKDFLQTEHILTFMNLNGNLQSLRPDVTLSIVKKVLKDNNKYTNKIYYIEDIYKIDSVSNEYEEIQQVGVEIIGTLSTYSNLEIISMAVDSLKSINDEYILEISSIDFMFALIDELNLDEDKKLEILNFIYSKNKHDLEKTLIANNIDDKYKNNIISLIDLCGNYREILKKIESIIINDKMQKAYDELKSLSAVFENYDNFDKILLDFSIESKLGYYNGIIFKGYIKGNNDAVLSGGRYDKLLAKFNAHTQNEKNKKNAIGFAVYMDKLYTNDTIKNEYDFDILILYKSGDEKILLSKVQSLIKENKKVRTDIYSDDYNTDYNYREKYIFENDALINS >gi|343387460|ref|AEM22950.1| hypothetical protein, complement(2674729..2674863) [Brachyspira intermedia PWS/A] MSNKKTKKLQNSTVMLTEHKLDDGTVVKLNPTVTRIVLCESDKR >gi|343387461|ref|AEM22951.1| ATP phosphoribosyltransferase catalytic subunit, 2675172..2675792 [Brachyspira intermedia PWS/A] MINIALPKGRLVNKVYTLFEKIGYENKELLEDNRKLVFENKDKNVRYLIVKPSDVGIYVEKGVADIGIVGKDILLENNHDVYELLDLKFGKCRVCMASVNGYKEDIERRLRVATKYVNISKNYFNSINRDVEIIKLNGSIELAPILNLSDVIVDIVETGSTLRENNLTVIKEIIDYISARLIVNKVSYKFKNDLIKTIVKNIEEVL >gi|343387462|ref|AEM22952.1| histidinol dehydrogenase, 2675803..2677077 [Brachyspira intermedia PWS/A] MIKVINYKECKSLDDILLRSQFSHDDVNEKVKAILEDVKQNGDNALKKYSKMFDNAEIETLEVTEKEIEEAYNRVDDKFKETLNLAYNNIEKFHKKQLRNSYITNEEDGIVMGQIINPIEKVGVYIPGGTAVYPSTVLMNVIPAKVAGVNEIILVSPPNKEGKINDNILAAAKISGVNKIFKTGGAQAIAALSYGTESIPKVYKIVGPGNIYVAMAKRLVYGEVSIDMVAGPSEVLIIADETANHIHIASDMLAQAEHDKLASSILVTTSKDIAEKTKEELYKQLEKLSRKDIALESIENNGRIIITETIDEAIYISNEIAPEHLEISIKEPFSVLSKIKNAGSIFLGDYTPEALGDYLSGANHVIPTSGTAKFASPLSVDDFIKKSYITYYTKDALSKVKENIINFAEHESLEAHANSVKVRF >gi|343387463|ref|AEM22953.1| C4-dicarboxylate transporter/malic acid transport protein, complement(2677605..2678546) [Brachyspira intermedia PWS/A] MISKINKMPLALTGLALGVGGIFNAWTIFTGIKYFAYVGALISSILILTIITKIFSSFGDFLNDLEHPVAGSTIPTLDMAVMVISSSVVQFVKPLGVAMWFTAIAVHVIFAFTFLAHRINLKDLHHILPSWFVPPVGIVVAAVTGTNMGFPQVSQVIVYIGTVLYIILFPFIFYRIIFHDPLADDRFPAFAVMGAPANLCLCGYLSAFTDYNTALLNFLLALGLFTTFKVYLSLIRAFQIKFIPLFAAYTFPLAVGAQALLKYANYSKSVNGEYYYIWNIVSIFELIVASMMIIYVFVNMMFFVHNNVIKEKK >gi|343387464|ref|AEM22954.1| DNA-directed RNA polymerase beta' subunit, complement(2678682..2682884) [Brachyspira intermedia PWS/A] MQFSNFDQIKISIASPQVMREWSYGEVKKPETINYRTLRPERDGLFCEKIFGTTKEYECYCGKFKSIRYKGVVCDKCGVEVTHFKVRRERMGHIELAAPVAHIWYYRNTPSRIGLLLNMNIAHLRSVLYFERYVVIDPGDSSYSKGDLLTEDEYNEALDRYGDNIRIGIGAEGIRDMLKDLDMDEEIRKLREEMIKKREKSDRRLRKRLEIFEDFKASGNDPTWMILDVVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNIRLRRLLVLRAPDIIIRNEKRMLQEAVDALFDNSRRKKVVKGPGNRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVAGPRLKMHQCGLPKKMAVELFKPFIMKKLVEINSAHNIKSAKRFVEEGREEVWGVLEDIAKEHPVLLNRAPTLHRLGIQAFEPVLVEGKAIQLHPLVCHAYNADFDGDQMAVHTPLSAEAQIEAWTLMLAPHNILNPANGEPIVNPTQDIVLGISYLTKLRTGSKGEGKMFSSPKDALLAYDNNLVELESRIKVLMKNKDGEEEFIETSVGRLKFNEVIPEDFRYQNRDFNSKDLAKFIHEVYLKHGTAVTVNMLDDIKELGYQSATVFGSTISIADILIPPMKKHEIEEATKQVEFIENQYMNGIITTDEKKQKVMDLWTTVEGRITEAMMDNLRQDQDGFNPVYIMADSGARGSKQQIRQLASMRGLMAKPSGEIIELPIISNFKEGLTVQEYFISTHGARKGLADTALKTSSAGYLTRKLVDVAIGVVVSEHDCGTVKGIAIEAIKNGDEIKKSLKERVVGFFTSEHIYHPVTKELICSANTEITEELGDLIEKSGIEKISIRHPLTCESRMGVCQKCYGRSLSTNNLASIGEAVGVVAAQSIGQPGTQLTMRTFHIGGVATQMVEENEIKVNYPIYIEQFSNYVVQPNGVKITARKGDLIIRRVLEKWEKSTLKDILTEQNTKVLIGDVIATLKDGTEIKATHNGTFKITDDDKYIMITGDKHTIVIKVGSEYKVDEHVFIEPNTVIASFDTYNEPIISEKAGIVRWQDIIPGRTLVESIDDQTGNVTNIIQEFKDASMQPKILITGEGDPFETDIPNGAQLLVENNQRVEIGEVIAKTTRIQQKSRDITGGLPRVQELLEAQKPKDTAIIAGIDGEVEIGGSHKGKKVVKIRNEFDETKHLVPHGKMLLVRNGDQVKTGTQLCAGKINPHDILETQGDLALQTYLLEEIQTVYNQQGVGINDKHFALIIRQMLRRLEITDPGDTKYIVGQYVDKYEFEEENRRYEEAGGSPASGKPVLLGLTKAALNTESFISSASFQETTKVLTNAAIKGKVDKLLGLKENVIIGHLIPAGTGVKLYNKLHVYNKQSGDLDKKDNIDNSAKEEEVMQITV >gi|343387465|ref|AEM22955.1| DNA-directed RNA polymerase beta subunit, complement(2682904..2686425) [Brachyspira intermedia PWS/A] MANNIQIDNKVYPERGVEFAKKYRIENGRVNFSRTASVIEPPDLLAIQKESYESFLQKDVPENKRKNEGLQEVLTSIFPIVASNEKMQIEFISYSIGEPKMTEKEARRRDKTYSYPFKIKVQLTVRDPERIIEQEIFVGDIPAMTDRGTFIVNGAERVIVSQIHRSPGVVFNRSDRDAMFVAKIIPDRGTWLEFELDTKKDIMYVRIDRKKKLPVTVFLRAIGITTNEEILKLFYEIDNISLEKLSDEDAKEALIGRRSYSTVFDTENPDEIILNPGELINPNLAERLLMSGIKEISVLNMEAIKDNVTIINTLDKDTTKNQEEACTKIYNVIRPGEPALIENVVRTCNDLVFDPKSYALGDVGRYKLNKRLNFPESEQDKVLRHKDIVETIRFLIKVFINEEQLDDIDHLGNRRVRSVGELLSIQIKAGFTRMERIAKERMQMQDMEAVTPQSLVSIKLIQAVIKEFFGTNQLSQFMDQNNPLSEITHKRRLNALGQGGLTRDRAGFEVRDVHHTHYGKICPIETPEGPNIGLIVSLATYAKINKHGFLETPYRKVIDGKVTDEIEYLTAHDEEKYHIADANAPLNEDGTFKDNLISTRFRSEFPYSSPDQVQYMDVSPQQIVSLSSSLIPFLEHDDANRALMGSNMQRQSVPLLYPEAPIVGTGVEAKICQPGTGIAVHAKRAGKVIKVVHDEIIIKPTKQNSDDDLDVYELVKYQRTNQDTNYHQRPVVNVGDVVKAGGLLADGPATDHGELALGRNVLAAFMIFEGYNFEDAILLSRRLVQEDVFTSIHIEEFSVEARETKLDKENITRDIPNVSDAAFKNLDERGIVRIGAKVKAGDILVGKVTPKGETEITPEYRLLHSIFGEKARDVKDTSLRVPHGKDGTVIDVRVYSRENGDELKPGVEEVVKVFLAKKRIIQEGDKMAGRHGNKGVVARIMPIEDMPFLEDGTPVDICLNPLGVPSRMNIGQVIEMLLGWSGHKMGLKYACPVFEGPKEEALREAFVTSGMNPNGKVRLYDGRTGEPFKNDVAVGYMYMLKLNHLVEDKVHARSTGPYSLVTQQPLGGKSQFGGQRLGEMEVWALEAYGAANMLQEFLTVKSDDMTGRARIYESIVKGDVISSPGIPESFNVLVQELRGLGLNITIHDEEGNQLPSTEKELRQKTKKQTKIFK >gi|343387466|ref|AEM22956.1| 50S ribosomal protein L7/L12, complement(2686556..2686942) [Brachyspira intermedia PWS/A] MALSKEEILQAIEEMKVIELHELVEAIKEKFNVTAAMPVAAVAAAPAGGAAAPAEEEKNEFDIILTGFDAAQKIALIKEVRAVSGLGLKEAKDAVEKGGETIKSGVSKEEAAAIKKQLEAAGGKVEVK >gi|343387467|ref|AEM22957.1| 50S ribosomal protein L10, complement(2686999..2687532) [Brachyspira intermedia PWS/A] MVFMPNKKNIETVSLLKETMGACAGLVFFDYRGVTVAQLTDLRRELAKTSSSMKICKNSLVDIALKELGREVKDEMFINPTAVVFAKEDVPGAAKVISEASKKNDKIKIKGGYMGEDLLNPADVQVVANIPPREVLLSHLVTALESPISGLANSLQSVISELAYVLDSVEEEKKKSA >gi|343387468|ref|AEM22958.1| 50S ribosomal protein L1, complement(2687628..2688329) [Brachyspira intermedia PWS/A] MATKEKKIGGKRYDAIRKQVEKLRLYSVDEAIELAKKNATCKFDETIEVTINLNILPKHSIRDTLSFPNAFGKEKRVVVFAQGEKADEAKAAGAMEVGFEDLIDKVKGGYTDFDVAIATPDLMKEVGKLGQILGRKGLMPNPKTGTVTLDIAQAVKSFKAGRMEYRADKNGIVRMGIGKASMTADKLNENFKVFYDEILRKKPSDLKGEYIKAVGVTSTMGVGIKIDHKRIKM >gi|343387469|ref|AEM22959.1| 50S ribosomal protein L11, complement(2688404..2688826) [Brachyspira intermedia PWS/A] MAKKVVGIVKVRIPGGEATPAPPLGPALGQKQIQIAAFVKDFNAKTSKMKGQLLNTYITVYEDKTYTFVTKGTSTSTLIKKKLGIEKGSGEPNKTKVATINQKQLEEIAQEKMAYMSANDIEAAKKIVAGTARAMGIKVE >gi|343387470|ref|AEM22960.1| transcription antitermination protein NusG, complement(2688872..2689459) [Brachyspira intermedia PWS/A] MSEEISDIKDYKWYIVHTQHGYENKVRERIEKRAKENGMTDLIVDIYIPSETVTSTKNGKKVSKEEFFYPGYVLVKMIMNDATQSMVRRTPGVAGFIGSHATTKEEGNIIPTPLSESDVARIFENREEKSKTGINEIIGMEFDIGEKVQVIDGPFNGLNGIIENINSDKGRVTVKIEIFGRSTPTELEFSKVKKL >gi|343387471|ref|AEM22961.1| pututative preprotein translocase subunit SecE, complement(2689465..2689785) [Brachyspira intermedia PWS/A] MADKKKNNIIDSIKEIKKELFERSVWPTRQDVINQTVVVIILLILASAFLGAADYVVTFLTRALLDGSILGSLISSKITLVLILAVVVLFVIYFAIRYMRKNRYNR >gi|343387472|ref|AEM22962.1| 50S ribosomal protein L33, complement(2689937..2690113) [Brachyspira intermedia PWS/A] MAGAKVKTEQIHLQCTECKRKNYITTKNKQNVPEKLELKKYCPHDKKHTIHKELKVSR >gi|343387473|ref|AEM22963.1| putative effector of murein hydrolase LrgA, 2690321..2690680 [Brachyspira intermedia PWS/A] MKLIKQFAIIFSIYSISDILSKTLKLPIPGNVIGMMLLFILLLTGIVKESHIDEASDLLIANMSLLFIPGTLAIIDEYQYVKAEIIPFVAICIFMAIIIMISTGLSAQFFEKLFSKFRK >gi|343387474|ref|AEM22964.1| LrgB-like family protein, 2691175..2691885 [Brachyspira intermedia PWS/A] MKELFIQNPIIPIVITLIAYIISYTIYIKTKLPILTPLVTSVILVGFSLYFMQVPYSVYNESGGKFINALVGPATVALALPIYRNLPILKANLAVIFISIAIGSSIGITGIFISAKLLGISDALFPSLLTKSVTTAIAVDITASMGGIRSITILSVIISGVTGAIVAPTVCKICKIKSSLAIGLSIGTASHAVGTSKAIELGETEGAMSGLAIGIAGALSVVLIPILYKLLLIIWG >gi|343387475|ref|AEM22965.1| hypothetical protein, complement(2691888..2692301) [Brachyspira intermedia PWS/A] MINVEDLVDVEAANINEDDWKLYKVFKPMKIFGKQLESLFDIGIHKVWKLEDIINNLKDHISILSDSRDQLKTAYGDFMFIDVDDNWYDNLEIYKILIKINEDGSIDSKVDCGDDENIFSVYFKNNDIIDIMESRIR >gi|343387476|ref|AEM22966.1| hypothetical protein, complement(2692356..2692586) [Brachyspira intermedia PWS/A] MKKYLFILSFMLLVMFSEKECKGPDGDSKPTPFRKETEMIYSKKYNLDVEGIFYSIIIFSVITLPSLYVINKIYDK >gi|343387477|ref|AEM22967.1| ribokinase, complement(2692724..2693596) [Brachyspira intermedia PWS/A] MSKKILIIGSINKDLVVTAPRFPKEGETILGSNFYTGNGGKGANQACAIGKLGGDVSILGAVGDDSFGKDLCNALISNNVNTDNLIIKNNVSTGIAVITVTDYGANNIIVAQGANALITKDDIKEELISLYDIIVMQLEIPLEIAEYAAYIAKKLGKTVVLNPSPSVKLSRDFLSYVDILIPNETEIDIIGGIDYAFECGVKNIILTLGANGCDFINKEGRKHFDAYDVDVIDTTAAGDSFLGGVVRMIADNKSIEEAIIFATKVSNITVTRKGAIDSIPTYNEVISKNW >gi|343387478|ref|AEM22968.1| putative acriflavin resistance protein, complement(2693626..2696763) [Brachyspira intermedia PWS/A] MKTIIETVVKRPVTILMVIVSVIILGIVSLSKLSIDFMPSIEVPYVSIYTRYKNAGPEEIEKSVTKIIEGAVATVNNIKEITSTSRENASDVTIEFNWGTDLNDASEDIREALEQVVDLLPDNAEKPIIRKFSTDDISLMEVAVYGMNDQAALYNIADNQIAPQIKQAKGVAQAEVLGGLKNEIKIDVNLNRLKAYNININEIASVLARDNNNLVGGQANQGFYRYTIRTMGEINSVDDIKNTIISLKKDSMGNASVVKIQDLAEVYQGYDDDVNIIKINGENSISIAVSKESGANTAEVSKNVIRQLEEYNFPQGVKYEIMFNTADSINEAIAGVLDAAWQGGLFAVIVLMIYMWNIRTVSIIAISIPISIIVTFTLMYFMKVTLNVISLSGLVLGIGMMVDNSIVVLENIFYYRHHGYGKYSSAINGAHKVSLAISASTFTTIAVFLPFLYIEGMVSQVFRDLCITVTVSMIASLLVAILIVPMLGARLITNKKLKLFSKFEALSNKYIHDNMSKLYDKILHFSIRRKKTVLIPSMILVFTVIFLGVMFIGKEGFPKTDEGQFMVRITMPIGTKYEQTQSFIELMENDIREIVKDDLVKIQSRIRKGDEANNANIRIELKSKSEGRKGTIEDYVELTREKLQKYPARININALGSASGGGTGEAIRIEMLGDDAAQAKELGDRIVSAISNIEGVRGAMVDIDESNRELQIYVNRNIAAKMGLKVNDVARIINTSFAGRTATTITPENSDFTDIDVNVQLENIDKVTIDDVKKVSIPVKGVLIPLSSIADIVKSYGPNRIYRKDRKRFTTVIANVYERPLNEVISEIKDNIDNNVFIPNGISINYGGDYEDMNEAFSQLIQALVLALVLVYAIMASQFESLIAPFVIAFAIPFGFAGSLIALFITNTTLNAYSAIGFIVLIGIVVNNGIVLIDYMNQLMHEKHINGDESALLAGKRRLRPVLMTTLTTILGILPMTLGIGSGNEMYKPLAIALLGGLVVSTMFTLIIVPTIYAAIRNKIPLKDYDKKDQESANDFALNNTVNAK >gi|343387479|ref|AEM22969.1| hypothetical protein, 2697184..2697879 [Brachyspira intermedia PWS/A] MNKKILSIIFTLFLAGLLSVSCSNKDTTGTGGNNDNGGASTTTTIPTGTQDGEGVDTSYQYKYASTADYGGLELTVDGKLSQTLTTQDQLQISTSTDKDPNLQGEYVGGVLIKMPQLTSLGFKSDLIRILPKNIKRNPGYGYDIHAVYVINNTNPEERLEYVELQTTGIQFGSSFITMNGDITLTKTTIVKEQDKDPVTTKVIYALKENKIKAIEKANSVTPIAGTPVNPQ >gi|343387480|ref|AEM22970.1| hypothetical protein, 2698052..2698558 [Brachyspira intermedia PWS/A] MKKINIHFIFALSLICLFYFNKNSYTQSKQNTIKVPEYGTGINKSWNDRFCVGFVQITKNGSSLGETQMRVLGSKNTYRDNGTLLIKLPLEDLYINSEIQAKNIVEMSSSEFSVHAVIYAENNDTPIIFKTSTFIYERSELYINASLSIKNDVYYIKGTLKHNPNFRE >gi|343387481|ref|AEM22971.1| hypothetical protein, 2698616..2699044 [Brachyspira intermedia PWS/A] MKIKLLIIFFALVFISCQSKEDGWFKNAGNKFYTNTKNQSILFIADKVLVGDEKTIIDPLGSLITLATTYVKEIKSKNEATYTMEFFGNQDFNFKLEGNTLNALINGEDVKFYYNDELTKKYYTNITAMQKWIEEYNATNTK >gi|343387482|ref|AEM22972.1| hypothetical protein, complement(2699134..2700177) [Brachyspira intermedia PWS/A] MEKLSKYNITFIVSAVSSLTIISMCAYMILNVPAYIMRVLMIIEFVCSFYFVCVFFYKLNRYSRIETFFYLIIYLVPFILSILGLFYITNFFSLNRVFLRENLIASFLTRGYHVLFVFYISHIIYFFYLFSIENKNTFYSLISSNFIIVVSVIMAVIFIVLYGIINWVFDDKIITSYGDKKNEIIYEAGLAFSQNAETDDLEYEGFAKSYDMVIVYYDNDLKYRAEDWDNFESMHLLFEVAIMQGNGFLFMGSGKEFIYPYYMFILIYVIVNSIILTSSIMFFKLFLDKKFNNYINIMVKGFKEDSYIYAIDTEKMDNTEIKKLAELYNKKLLTYKYRERFIKMFTR >gi|343387483|ref|AEM22973.1| putative pyridoxine kinase, complement(2700165..2700917) [Brachyspira intermedia PWS/A] MLVGNDAYEKFIDYIENVINFNFLSHIPGSDDTIEMQRESIINIVKRSNTNESFLDYISYTYTIFENDIIKQILSISWIKGNGEEDKIINDDKFELNNEELVNYISILLVLRDVMHTSYIASLPIYYEYKYEQKEFIDKAREMIEHSISNISTLEHINPIFIAIAAKSVIPYSMTNDELSSSSKLIAILFNLSRIMASYPYTDKIMENTQPIFSSALYNLVNNASFLGLDYKMIRVIYDKAKTGEIKWKN >gi|343387484|ref|AEM22974.1| phosphoesterase, 2701092..2701769 [Brachyspira intermedia PWS/A] MENEQNNINDNNPKNRKKIRRKIKKILKKRRKQKRINYINNLPLIRFMSNIDSKLFLKIFKDNRKGPVKSFMKFMSRMGDGYIWMIIYLIFYMFRIDYAALYFSRAVTGIFICIFLFLYIKSFFSRTRPYKKHQKTPIMYPPDKHSFPSGHTMVAFSVSFSMGSYSLYSALLFYPIASLIAFSRVYVGLHYPFDVVFGIIFGTLIGLLANVIFFYITGLPIIGHL >gi|343387485|ref|AEM22975.1| methyltransferase small domain protein, complement(2701786..2702394) [Brachyspira intermedia PWS/A] MYDIEITIKNIDLKFNSSDKLFSPRNIDIGTLSMIDEVNFENESKILDLGCGYGFVGILAAKIIGEDKVVMCDIDTEAVEMSKHNAVLNDVSNINIIQSDGLKNIADKDFSMILSNPPYHTDFSVAKHFIESGFYKLALNGKFIMVTKRLDWYKNKLSSVFGGVKVKEKNGYYIFISEKRNMIDSNKLKKKLKKKIEKFLKV >gi|343387486|ref|AEM22976.1| acylphosphatase, 2702482..2702760 [Brachyspira intermedia PWS/A] MFKVDIILKGRVQGVGFRYYAKQVADEMKIGGKVWNNYDGSVEVIGYLQTKNDIDEFVEKIKIGPQMSSVKEVTVTVTPSDPLVDEVFEIAN >gi|343387487|ref|AEM22977.1| putative peptidoglycan-binding LysM:Peptidase M23B family, 2702920..2704626 [Brachyspira intermedia PWS/A] MSASEFLKINNIKDPDKYNLKVGEVLKVKEKGYTLVYDTDNKVFGLKGEEGNSYKDYKVKNGDTLFGIAFAHGMTANEFLAINNIKDANKYNLRVGQTLKVANNQKETNSPSNNIINNSNNNDDNNTENYDTYKVQSGDTLYGIAFSHGMTASEFLKINNIDDPDKYKLYVGKTMYVKSSKKENNLNTNNEKDTVKEIEYYTVKSGDTLYGIAFQNDISVNDFLKINNIDDPLKYKLRTGEKLKIYARASASNAQSKTIKTYKVKSGDTLGEIALKNSMSLKDLLQLNNLKNNYVLKVGDTLKIYDNISIGNSSQTTAYRTLENYKVKSGDTLSEIALARGMDLVELYSINNINDKYILKVGDTLKVYANPKKTTTLVISNYKVQSGDSLYSIAKKHKMDLRDLMQLNNIKNANEYKLYVGANLKVKTAKMVPYSFNDDSILPESSFIWPYKGIIISGYGVASDKLANRGVNILGDVGDKVVASDDGIVEYADNIRGFGTVIILKHKNGYNTSYAHLSKINVKLGDIVKKGDYIGDIGDTGMIDRSELYFKISYQGRAVDPVKLLPKS >gi|343387488|ref|AEM22978.1| Methyl-accepting chemotaxis protein, complement(2704744..2706564) [Brachyspira intermedia PWS/A] MKNNIKLLLKLIIPYSLFIIITSAIIFVLFTKAYKSDYLEQISINIDKIGYYIQRDIDNVNLVLNMLDSYAVADLTPYEIGLSMSNVYNKRQEFFDILYGSTVPFSEGGLFLSVTHQYPTNYDQTSRVWYKGALSTNGIYITEPYIDFNTQKLLITFSKAVYTNGRLKGVMGIDFSSVSNVRTEGNIDKNNIFIITSDGLYIKHSNPDYVLKEGVTIFNTDNTFEGAEEYVNNIASPIKIKNNNWYSIRQIPNTKMALAVKGNLDDYKSIFNKTFFIFLLMLIFLLVMGLFLTTIVLLPLSKYLDMAITAIDNMADGNFSYRIDKSILSKGNRAGDLARAIDKMEANIGKLIFKIKKAIEDINAVGVEISQSSEKLLERAYIQAVNLEKLDEALKDIATAINLSSISVATSKDSMEKMENTTQTGVQTINEIESNMNEIQASSKKIFEITKSIESIALQTNILALNAAVEAARAGEQGRGFAVVASEIRKLATTVSQATKDITVIVENAVDKIDNGSISVSRTSKTLDSIAKSSVETSSILLDISASSNEEIERINNINNDIGVINEIMIKNEELSKQASEASAKTSKMAEDIVKELSFFKFGHGK >gi|343387489|ref|AEM22979.1| methyl-accepting chemotaxis sensory transducer, complement(2706571..2708394) [Brachyspira intermedia PWS/A] MIMKNRIRLILSFTIPYIIFISIIAVILLSIFIPLNKEFYFNRISLNVELAKSDIESRVDDIVNSLTFLSSYAEIGINTPNIAQSITNVKKFGNYFDVFYCNTVPYSRGGTFISSRITYPSNYDQTAREWYINASKSQNSLYITAPYIDFNSGNLVITFINKIMINNRLAGYFGIDFDNMNTVIRNANNDFIDSINVITEDGLYITHENNEYLMNPKMLVFNDNLFSSYKNNMEDSGIYIKDNYWYTVKKVNNAPWYIAVKGDASYYFGLIRYLILFLIAFGILFIIGELIIVSISLIPISDRLDDIIVSLENMANGDFTSRIKEHKLMDSSARRLSSVMEKMQRNIGKTMYKIKTGVEEVNKNGEAIANVSIELSNKANEQSVSLNNLIDAINSISSSIEYASKKTDYAKTMSDESFENTKIGVKMIGEIKDNMNEITEASNQIAHIIETIQAIASQTNILALNAAVEAARAGDQGRGFAVVASEVRSLAQTVTNSADNITSIVEGAVSKIEHGSEFVSKSSEVLNSIESSSLESSNSLSEIYKMSNDKKSGIDNINNIVAKINDITMSNAKFANESAESSVKASKIVNEIVDELSFFQFKSSNKD >gi|343387490|ref|AEM22980.1| hypothetical protein, 2708934..2709341 [Brachyspira intermedia PWS/A] MKIDFNLIKYIFDFIDNSSSYQIIGSSLSKQFDVYNENKIPENDLDESNQEIEKDYQNKRINFINHIQVLYDNKCLGIPYYPVSIEDLSDAYIRIMPNGYELLYILNNYNLEEEINKNIPISIIIKKYQNEILKK >gi|343387491|ref|AEM22981.1| hypothetical protein, 2709416..2709952 [Brachyspira intermedia PWS/A] MVFTMKNISKITLIILFILSSTLLAQWEVNIDNDLMFMMNFDKENESVLAIGVDTSIVDDILSVYDDSQIAAVAFYSDKIIPNDNLYLRIKKKSNNYITYSISEEDIIENDESIYIGIGIKTENGIRANNLINILLDSSELELYRDDELLGYFNLKDLKDILKENLGNTEWYNQKIKN >gi|343387492|ref|AEM22982.1| glycosyl hydrolase family 57, complement(2710120..2711706) [Brachyspira intermedia PWS/A] MSKGYLALVLHAHLPYVRHPEHENFLEEEWLYEAITETYIPLLDAYDRMVNDGVNFKITMSVTPPLMNMLANELLQNRYVKYIEKLIKLSELECERTSLDPNFHHTAEFYRDKFKKIRDIFVYKYNKNLLNGFRYFLERGNLEIITCGATHGFFPFMQEYPKAIEAQLKMAVKTHEKHLGRKPTGIWLGECGFFPGLEKHLANNGIKYFFVDTHGIMYADKVPKYGVYAPLYCSRESRVAAFGRDIESSRSVWSAEVGYPGDFRYREFYRDIGYDLPFEYIKDFIQSNGLRKNTGIKYYRITGKDCAKEPYNPEWAMEAAGDHAGNFMFNREKQIEYLDSVMDRPPIVVSPYDAELFGHWWYEGPMFIEFLMRKIHYDQNTIETITPKEYLERHPVNQISMPSMSSWGANGYGEVWLNGTNGWIYRHLHKAAERMIELAHDYYNETGLYERALNQAARELLLAQSSDWAFIMHTGTMVDYAVNTTKLYIKRFTDLYYAIKNRDLNEEWLSKIEWRDDIFPEMDFRIYS >gi|343387493|ref|AEM22983.1| ferric uptake regulator, complement(2711841..2712227) [Brachyspira intermedia PWS/A] MNNTRNTIQKQVILNAVRELKNHPTSEEVYNHIKPNFPSISLGTVYRNLNLLSETKEIQKLSIIDDAVRFDHITNDHYHFQCSKCKKLSDIPMEYQKKLDELVSKEYDVEIFKHDIVFTGICKNCKDL >gi|343387494|ref|AEM22984.1| hypothetical protein, complement(2712629..2712895) [Brachyspira intermedia PWS/A] MRVIRFIVFACFLVIFIVIANIIHKNMNSYEVVNIKNPFTYYNLIAYSNNDIKSLASISFKDSFESLSEMFDMDRSFVPNNILKKYKN >gi|343387495|ref|AEM22985.1| hypothetical protein, complement(2712957..2713613) [Brachyspira intermedia PWS/A] MEQKVSKLADSYLREKNIPVNTNMRMDIIAYTLNRVQPQYVTSARGVLHSYNKDPIQSNTEILSIIADACEIVTRRKENTLLESVPSIDESGYYLTYPSIMGNITASNNFERIENALVYIFSDGKILEGYGVNFPNPAIVSSNVPGKFMFCFMPKRVDSNTEVEVKLDIVVESEKFMQYESVLTFKLKPSYYNAGDMPLFSIEEVNDILLIENHNIPS >gi|343387496|ref|AEM22986.1| D polymerase III, delta subunit, complement(2713925..2714941) [Brachyspira intermedia PWS/A] MNKVSVKTEIEFQKVKDNYIKEPFKHCIYVLTGKERLFKKAFVAAMHSSMFSDEGDSEMNYSVFYDKNDAVGFMPLEVADTPPFGSKLRLIVIYKYNNFQEDFLDYCSNPSKTSIVILETESSLEEDPIYKYFSKKKDVNNIYFIDFPLPDEKDFRGLINAYIIKQGKKISSEAIEYLINNINLDYDSLYSELAKICSYNDKEYLNVEDIADFTYVSKNRNIFDFLDAVFERDRKKCFSIMHRLDQDASSSLTLMMNNFLAIYYMKIFPPQTTLGEISKLTKIPEFILKKKKTSLKLFSLEEVVNIISKISYLNTLSVTTPVNIFKAHFELFLFTITK >gi|343387497|ref|AEM22987.1| hypothetical protein, complement(2714987..2715409) [Brachyspira intermedia PWS/A] MDKNTEHITCLINHEESFKRIIINRNYKTKRYYIDFFVAGYKYNNGKDVIDLLLKNEPINLLRDITNPYDRFAIAIYDRSFDFRLGYVPSVISPLISYKLEDKRNRVYARIKNVKLDATDECKIEIRVFIDIAKKKKKAM >gi|343387498|ref|AEM22988.1| hypothetical protein, 2715680..2716258 [Brachyspira intermedia PWS/A] MIFILGEHIMKFYKYALIIFILIASFSCKKTELTITAPGPDFFLGKMENGNWGGVTVNGDKLTIDGKGDYTFEEPILGVGGIYNDGNGGYLVTVPAGDNLGTVEMTEKGKQAVDEILGIVGEENALGAINGIINSKDPNNINVDEIVGNASVTEEEKKRIEDIVIGLNGGNNFKNPETIGPNGPNTPSIPNP >gi|343387499|ref|AEM22989.1| hypothetical protein, 2716444..2717214 [Brachyspira intermedia PWS/A] MIPPMISTIFDNLETFSGLTGFDLGENKKFLDAINVKGSFWYVPTISYTLLLHPRIGVEVGVGVQSMSFSLTIPRDKAGELVDSTVNTGNLGNIGGLIGSDTTLKTSLIFIPVTFGITFYGGKNRQVLNTFRFGVEALISDVETENGVTGLKTKRHTVDTGMYISYELGWSIELFPTREWPVKPYIDISLFEIGYYVRSGLPGVYEDMREGINFFGGGLVDLTASIPAWSSFPSWINYVSAIRFSLFPRIGFSLRF >gi|343387500|ref|AEM22990.1| conserved hypothetical protein, 2717228..2717938 [Brachyspira intermedia PWS/A] MRKNILIILFLFILANITFADDVSNIVVEKYKNNSTNESALNSHRNSIGINFGSTIFYMLVAPSVFNLLMPLNDNGNLKLQGDFGLDITYTFRAAEKVDINVDAGFYAMKTYYNNTSAEYNGNVYGLGFSIGGRFYFNGKDRASGFFLMPKVGTTLFITQGRELQKSTSTYTNRNTNIWDFYISGEMGFRIDISRGLGVNSGVRPFFDISILDIGFSYRSIIRIVPLPRFAIGILF >gi|343387501|ref|AEM22991.1| tia invasion determinant, 2717960..2718625 [Brachyspira intermedia PWS/A] MKFLIRKFLLISILSACFTNMLMSMDIGAYLAPKFIFNVGDSKIKLQGNNKNTLNMYVGGGLALGYNFDIFHKYSTVRVEFEYLYRNALPGNAYKTDIKTINSHTFLIGAYYDYNFLYINYDNPDSIRSQLNGGKRPVMSVYAGFILGGQLDSYITCENFEYHGLFKTSKYYNKAQFVYGFGGGLAFHITEIVSIDLGYRLLLNTSSQLSHDVVASVRLNF >gi|343387502|ref|AEM22992.1| invasin, 2718636..2719274 [Brachyspira intermedia PWS/A] MKKNYIIIFMFIFLFHSTQKLFSIIPEGLYITPKFAFAHNGNDAYIKDNGEKGYFNYLGGGFALGYSIPTINKSSPVRFEFEYLGRKLVSMSDDLQMHTLLGSVYFDLNFLLTKEKLTDEVYKQTMLTQYAPFTIYLGISIGSRINTGIPEELNGVKLQNSSSTLVFGFSGGMAFNVLPYMSIDIGYRYLLDTKAQGYHEVLAGLRFKVPKI >gi|343387503|ref|AEM22993.1| hypothetical protein, 2719433..2720431 [Brachyspira intermedia PWS/A] MKKMINNIIFIVLIAFVYSCNNSSTNPSSNNPIEAPIENVTDYIVKANTTEADIEAKMKKYFEDKGSYAVFLEDTKENIANNKTLEIINTIIKKDVYTKDGVYLDLSRTTITELADNVFNGNRNLNKITLPNTITTIGGYAFRDCSSLREINFPSSITQIKGGAFQSCLSLHTADLSQTKLTVLEPYLFNDCSSLIKAVIPETVVDIKNNSFGDCSALKEINLPSKLIRMYPESFVGCKSLEKISLPSTLIYMYGYTFGECASLKDVEYLGNNPATIKVANGAVFDGYTENSTPVNLYLPNVTADPKDGSWNNFLGYDWSKQTINYGKTMPK >gi|343387504|ref|AEM22994.1| hypothetical protein, 2720450..2721121 [Brachyspira intermedia PWS/A] MKKAIILLFIFFILISCKYKITSPKIQYECGTTDNINDNNNLYTVGANSTEEEIRTALANNKEISGKNIIVVTGYIDNSSKIFDNIKTVIQNEKNIILDLSGSNLNADNKFTLNDVTSLITILLPNMQDIIENFLSGCTSLTSIQIPNGMTIIKDSCFNNCTSIKNVEYLGTAANAITATPFTDSKPTDLYLPNVSSDPNDGSWDNFLNVAWANIHYGASMPK >gi|343387505|ref|AEM22995.1| phosphomannomutase, 2721239..2722930 [Brachyspira intermedia PWS/A] MEQEVKARIDSWLNGSYDEETKKEIKALLDAGNEKELIDAFYRDLEFGTGGLRGIMGVGTNRMNKYTVGVATQGLANYILKQGGSDYKVAIGYDSRNNSDIFSKAAAEILSSNGISVYLYDDIHPISLLSYAVRSLGCIAGIVVTASHNPKEYNGYKVYWTDGAQVIPPHDKNIIDEVLKVKPEEVKMGDSSKVTIIGKDIEDKYMNDLMGYLVNPDIIKKHHDIKIVYTPIHGSGYKMVPMALRKAGFTNLTTMEGAQPPNGNFPTVESPNPENPEALKIAVDKAKEIGAELVMGTDPDCDRMGCALLTKDGSYMYLTGNQIGSIMAYYLITNKKNVKNPYIVKTIVTTELARAIADANNVKIYDVLTGFKWIADVIERDKEGTYLFGFEESFGYCINSNVRDKDGVSSCLMLAEVLAYCKENNMTLADYLESIYEKYGYFYEETISITKKGADGAKAIADLMTYYRNNLPKEISGVKVESISDYEKKEVYDNTGKKIKDITLPKSNVLQYILEDKTKITIRPSGTEPKIKFYFEVCVKESKDKRLAVAKEKVANFKKFIKE >gi|343387506|ref|AEM22996.1| Abortive infection bacteriophage resistance protein, complement(2723451..2724344) [Brachyspira intermedia PWS/A] MDIKRPYKYEEQLQKLKDRGCIINDDKKCMSILESVNYYRFSAYFLPFKQSNDIYIYGTSFEKVFNIYEFDRKLHTILFNVLEEIEIFIRAKIAYYHAHKYGALGYLDEKNFYNTNSNQKHINKKINYHKKFINNLKREIKNNQKVLFVKHHISKYNSNFPIWVATEIFTFGMLSTFFANLKLEDQKILAKDMYNITAKKLESWLRCCTDLRNICAHYGRLYYRIFSSIPKEMNHLNNNSERKLWGAILAVKELYPFKDKWDYDILPNFINLVDEYENYIDFVHIGFPKEWKDYLKK >gi|343387507|ref|AEM22997.1| RecG-like DNA helicase, complement(2724531..2726621) [Brachyspira intermedia PWS/A] MLNNDYSKDIFTKSIKYSKGVGPKYAEILAKKGIITLYDLIAFFPRTYDDRRKTLKLHEALENKDKTSVVYVEVIDVSSFTFQYRSKPLVIVTDGIAVCEVPIYGGRLPVGVTKGAKLYLTGKFVRSGRGKLQCRMTEFEKPSSNALSYGKIVPIYPLTEGLSQKKLRTLIVDELESFEKNMKYDIPSVIKKKYRLKSFVPSIMEMHFPTSFEALAEARESLIFEEFLTFQYIHLSERRPNILIKEERYNSLNLLEKVKSSLSFELTADQLNTIEEIKNDLFSTKQMFRLLQGDVGAGKTIVAFLTALIPAESGFQTAFLAPTEILALQHYNTFKKLIKAAGLEDIIKIDILTSSVNQNERGYLLKRLREGKSHILVGTHSIIYDEVIFKNLSYAIVDEQQRFGAAQRNKLLSKGNNVDFLLMTATPIPQSLALTLFGELDLSIIKSMPSSRKGVLTKYKELYERDHCYKFLKSRIAKGEQGYVVFPLIENNDSSFITLSSEFQRAKETYFSDIQIEIIHGKMKDEEKEYIMNRFSSGEIKVLFSTTVIEVGIDNPNATTILIEGAERFGLSQLHQLRGRVGRGDKLGYCYLILHSELNDIIKERINIICETTDGFKISEKDLELRGAGEFLGDRQSGIPDFKLGNIIKDKEIMRKAKDEMRSLLRDENSREAFYKENEAFILKANYLKSRIVKDE >gi|343387508|ref|AEM22998.1| hypothetical protein, complement(2726633..2727100) [Brachyspira intermedia PWS/A] MRIREKSKELWEKISLETTFDKLTSIIDKTKDILNLSSSRHLSKFLDKIQLMVDMIGDYINKNYREIPWKSLSAVAGALIYLILPLDVLPDLFPFIGLLDDAFIIGLCIKCFSTDLEQYKIWKYGESDEEVTDDGSESDEADYEIVDDKEKDDDK >gi|343387509|ref|AEM22999.1| PilZ domain containing protein, 2727263..2728018 [Brachyspira intermedia PWS/A] MDKEQVKGVIIENNPSILTKYKNAFNNIFDISTFNDTSSSLGYIIENNLSIYFYIIRYNETEKDGINLFVEKVKKINPQIKLVMTDVPDSFDEAAYPYALIFHRNTDASVIVQSIQNEVSKLLDDGSKKRRQYSRVNWPLNVIIAYKDKIRGTIDRNILSISGNGAYISSDTNIPDKGDMLGLTISFKDFKLFTEAKVVWINNENQKPDLPKGFAVQFIDIGMASQKIIDQIIRDKLLQELLVELKDENFS >gi|343387510|ref|AEM23000.1| 5-formyltetrahydrofolate cyclo-ligase, 2728002..2728604 [Brachyspira intermedia PWS/A] MKTSPNENNIKEAKNLIRESFKLIRNNLDSYFIKEKSAVIFKKFRNIVNINKFHSISVYVDFNNEVPTKEIIEYALKNNIKVSVPFLIDNHNMKLKYINDYDKDINRNTKFGCGEPFEHCKDCNINEISMFIIPALAFDEKCNRLGFGRGYYDNMLKRNKNALRVGLAYDYQILPSIPKDNNDEILDIIISESKVITATF >gi|343387511|ref|AEM23001.1| CheW protein, complement(2728607..2729122) [Brachyspira intermedia PWS/A] MAEQTEQQSIESTENRVDLEDSTNLVTFRLGSGEYAIDIMQAKEIIKMEKITLIPNAPDFVEGVINLRGNIIPIIDLKKRFNLEETEGDKNTGIIIVKIEDVDMGIIIDSISKVVSISNSDIQPPPPMLSGIGQKYIKGVGKLEDKLLVVLDLEKLFTTDEEEEETASAES >gi|343387512|ref|AEM23002.1| putative Na+/H+ antiporter, 2729433..2730860 [Brachyspira intermedia PWS/A] MNIKKINTFWKLFPLLFILITVLIFTVKYGVPIEFLLTIGTLIACIIAHFAGYKWKDMEEAFIKKIVDTWLGVLIFILIGIVVGSWVYSGTVPMLIYYGIKLIHPSFIPLMAFIITSFLSIFTGTSWGSASTAGVAFIGIAQATNTPLPLVAGAVISGAYLGDKNSPISDTTVLAALGAGTTLQNHIKTMLVNTIPSAILAAIVFTILGFNASPINSDILNLKEASEILTSLENIYNFNIFLLIPPIFVLIASVKGVNPVITMFIGSLIAIILGAIFQNFGFINAMKSFVTGFNISMSPTVNPESIPQNLHTLLNRGGMISTMPSVLFLILALTYGAMLQLIGTLNTLIELLVKIVRGARSLIFVTWFTTFTINSALSSLQFTFLTLGDVLKTVYDKYNVNRGVLSRTMEEGGTLTEVLLPWTVTGVYMTSILGVHTLQYMPYSFFNLISIGISFIYMLTLPKFAVQINKDILKN >gi|343387513|ref|AEM23003.1| hypothetical protein, complement(2731331..2731933) [Brachyspira intermedia PWS/A] MKWYEKYPEEFREVLKKIFLNNFFDDYNDKEYILTDHDISVTIEVFENSLLIKELEGNASFPYLKNKKCADKVIIQKESDKVYNIYIFELTRKRKGDDELIEQFEGACLRTLAVISYFKYITINKVYLFFVRKDMSADPISFRRPISNKKLLVDNDEVLELNNISSVFDGEILKIKLLEHNKTYSIKTHSKEYGLNISFL >gi|343387514|ref|AEM23004.1| hypothetical protein, complement(2731936..2733288) [Brachyspira intermedia PWS/A] MSEKNKYPKLYVKNFAKIKEAEIELAPFTLFVGDNNSGKSYLASLVWYISSVMFFWDYKQSLNFQNYHYLYNLANEIFSNNKTDVTEVKISNEVIDECMNVANDVISHNKVAIFENIFAYKNIIAEEIYISYTNYDININMKYHKSVSFNKSNDNIIYFYHNNMYFPGNASNSIDSIITLLCMRILEGIMSREYNNTLFLPISRTGFLLFKDLIINKSLNSYFSNNYYSNVNDKLELTLPIRDFFFKLSYLNFNENISKKNIVDLLENKIINGKIYLDNMPSPKVHYKSNNSDIDLKMHVSSAVITEIATLILFLKYSKHNEDIIMEEPEISLHPELQQQLTRVFIKLINKGIHILITTHSDTIVQHINNMIKLNSNDEERKKYLMNKYGYDEDDLISEDMVRMYQFDIEEDGFTKVTKLESSEYGFEVPTFNKVLKKISDEIYDFQEEL >gi|343387515|ref|AEM23005.1| hypothetical protein, complement(2733752..2733970) [Brachyspira intermedia PWS/A] MNIQIAKLFIVIGIISIIIGILFLFNIKIPFGKLPGDIMIKKENFTFSFPLLSCIIISVLLSFIMWLLSRFK >gi|343387516|ref|AEM23006.1| potassium uptake protein TrkA, complement(2733974..2734660) [Brachyspira intermedia PWS/A] MLQYAVIGVGTLGKALINRLMTKPSIEVFAIDNDINEIEAIKNNVTQAMRLDSTQKEALEAIEINKFDAVILTIGEDMMTSILTALLLKELNVKNIIARYSNEKHRAILSMIGITHLVSPEESMGVHIAEQLEVGDTLLLYDLTEYHSIVEFPVHGGLAGKNLKELDLRKKYKINVVAIKKETVGILGEKKVIVDCTPDPDVPMVEGDILVIAGHDKDIEKMYKKMAE >gi|343387517|ref|AEM23007.1| hypothetical protein, complement(2735673..2736011) [Brachyspira intermedia PWS/A] MFDNNVHYIRKELESIYKIIVENLGKELLNTEIKRLEYEPKMDRININNFIFIRLTFENEYDHKELYYDIYIEDEDGNDVERALISVEKPFTKVVDKIDYLVKLNYQANEDD >gi|343387518|ref|AEM23008.1| putative ankyrin repeat-containing protein, complement(2736100..2737077) [Brachyspira intermedia PWS/A] MRFILCTFLLLILLSCTQKSNVNVDENTQSNETSMEGVNIVQDLSIEDAIAEYEESPCIDIIKNLISSGNINNTLTETTNIVNAEDTEYDLSVTFDEGTTALMIASYYGYADLVNALIQNNADANIKNKRNYTALLYATDIWSRQGIGIYDSNFNVVELLVIAKADVNAVNNYGWTPLFFAADNSNSDVVAFLVDNGANINAVSDEGITPLLLANDVETVKILSKTVNINKPNLAGITPLISFAGREISIEAISILLENGADVNMVDKDGETALSYAVENGNFDAALMLLENNANPNLAKKKAKDLANIARELGDEEVASILDKY >gi|343387519|ref|AEM23009.1| acetyltransferase, RimL family, complement(2737146..2737724) [Brachyspira intermedia PWS/A] MLNTQRLIIRKFNIDDAEALFSILSDEEVNKYLPWFPFQSLEETKIHLQKFYLDTNDNHNFYRYAVCLKEDNVPIGYVHLENNNDNNDFGYGLKKEYWNMGIITEASRRVIEELKKDNIKYITATHDINNIASGEVMKKIGMHYQYSYEELCQPKNIKVIFRMYQLNLDDYNKRVYKGYWNKYTNHFVENIL >gi|343387520|ref|AEM23010.1| L-serine dehydratase, iron-sulfur-dependent, alpha subunit, complement(2738144..2738974) [Brachyspira intermedia PWS/A] MKISDIVIDIEAQSQKTDRQTVINNMTSYYDIMKEAVVNGKKDKFNFVTGLQNECVEIVENFYKSKKSILGETIGEVVTAAMAVSGYNACMGKIIAAPTAGSCGVMPAVLTVCENRGYKKEDVVKSMFTAAGLADIIAQIATFAGAEGGCMAECGSAAGMAASACAEIMGATPQQCADAFALTISAMLGLICDPIAGFVEVPCMGKNVMAAVHAMVSAEMACAGFRSVIPADEVVSAMKEVGDGMDERFKETSQGGLANTPTGRAIAEKLLGKINK >gi|343387521|ref|AEM23011.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit, complement(2739050..2739724) [Brachyspira intermedia PWS/A] MAGLFDIIGPVMIGPSSSHTAGACRIGKLAKKILGEDVKEAKIYLHGSFALTWKGHGTDKAILAGLLGFETDDPRLRDSYSFAEKANLKYEFIPTKLREAFHPNTVYIEAKGETNEIDILASSIGGGLIVLDKVNGIEVHYKGDFPTIAIVNKDVPGIIAKVTSIIFEKGINIENMNVTPQFEGPNRGYAIIVIGMTDVISKDIEEKIRKIENIRDFVFLDKLY >gi|343387522|ref|AEM23012.1| hypothetical protein, complement(2739875..2740801) [Brachyspira intermedia PWS/A] MKTKLIIVLLILLSSLNLYSQEEQLNNDLNYLGDDYTFTNPFRIYEVDKYYMGWQDPRAFIGRILFAKNFNVEKNLSLIAPDVNWDFKSVSVYVEGRLASEIMFYRNKYFSVGMGGAMEISILGRSSGLFDVYDFSGQFMVFADLWLQNLVGINMKIRFIPMYHQSTHLVDGFKGDTKIKSGSSYEFGSIAVYYYIKNFSIYLGSEISYNAVGNSPQLFRIHTGLDYRFPLYKDQISLITGINIAAILDKKDKLGFIKDPWHAAVNFGIGIEFYRYAISLKVGYGKPRGASSYFGYETKVGLEISLLF >gi|343387523|ref|AEM23013.1| TPR domain-containing protein, complement(2740958..2741788) [Brachyspira intermedia PWS/A] MKRIFFIFGILILTCLSIYAQGQSLNTPNRTADTVRTMEMDTNTYESLFSGKLEPAWVYIGEAKRAIHNGDIPYALYIMNKTLMYYPDNADAHYFLGLIYEKEAGNPAEQGGAASYHLAIEEYKRAINLATNLTIPAYKLDAYFSLLYIYEKLIDENNYAAVEKEIITMAENTYKNYEKGRIYFKLAEHYGSKNRGTSAVDYYRQAYINGYRQKLSLFRMSLIYRRMRNYVLEKETLMLAVKYDFDNVEPSNFDVQKAIVQRLEALKNVRIPKKLN >gi|343387524|ref|AEM23014.1| beta-galactosidase, complement(2741852..2743630) [Brachyspira intermedia PWS/A] MAVFEVKEDFILNGKPIKLLSGAIHYFRFVEEYWEDCLYNLKAAGFNTVETYIPWNIHEIDEGVFDFSGNKDIASFIKLAQKMDLLVILRPTPYICAEWEFGGLPAWLLRYDNMKVRTNTELFLSKVDAYYKELFKQIADLQITRNGPVIMMQIENEYGSFGNDKEYLKALKNLMVKHGAEVPLFTSDGAWDAVLEAGTLVDDGILATVNFGSQAKESFDATEKFFERKGIKNPLMCMEFWDGWFNLWKEPIIKRDADDFIMEVKEIIKRGSINLYMFIGGTNFGFYNGTSVTGYTDFPQITSYDYDAVLTEWGEPTEKFYKLQKLINELFPEIKTFEPRDHKRADFGEAKLKDKTSLFSVIDKISKCQKSDAPITMEKAGRGYGYMLYRTTVKGFDNNMNVRAVGASDRVHFYLNGEYKGVKYQDELIEPIEMHFNNGDNVLELLVENVGRVNYGYKLQECSQVKGIRIGVMADIHFETGWEQYALPLDNIKDVDFSSKWIENTPSFYRYEFDVKEPADTFLDCSKLGKGAAFINGFNLGRYWSEGPVCYLYIPAPLLKTGKNEIIIFETENVFADTIALKDKPIYKEIKK >gi|343387525|ref|AEM23015.1| methionine aminopeptidase, complement(2743691..2744503) [Brachyspira intermedia PWS/A] MAIKIKTQAEINLMRESGHILANVFKEVEKIIQPGISTKEIDKFVYDYIRKHNAKPSFKGYGNPPFPGSICSSINNEVIHGIPSKKKILKDGDIIGLDIGVYYKGYHSDRAFTFKVGNVSEEASRLIEVTMQSFFNGVKKIKDGVHLGDVSHAIQKTAEDAGYSLVREFQGHGVGANLHEEPAVPNRGKEGAGPILKTNMVIAIEPMVNMGHHAILIEDDDWTIITRDGSLSAHYEHTVAVKEDGVEILTALEDDEIVKNILLNKLKNSI >gi|343387526|ref|AEM23016.1| hypothetical protein, complement(2744517..2745047) [Brachyspira intermedia PWS/A] MARKDMVNSVIGDGSSFKGTFIVKGSFQIDGKFEGELKIDGHLIIGPNGKVKTSTILTESITIAGTLIGNIAAEKEVILIETGRVLGNIEAPKIDVGEGAVIQGEMTITGGQKKDITKVVHESFTGIKIEDEMSENNNTSDNNLSSDNTSSSDNNTYNSYDSYNTDNNNSNNSIFN >gi|343387527|ref|AEM23017.1| methyltransferase, complement(2745135..2746100) [Brachyspira intermedia PWS/A] MKEINNILEECRKIVNKNFSKEEIEKIESNDNFIKAMMNEENNNSFDIFYNMLKDSFSKEIFKKVIRYRYMLSFHRDVHMNFKKEVLFSFKYGIISTYKWIMSMISFLIFNRIFLPKEIGAFALFHIFKMKQYDIKDIFEVRNDSVVFDVGAWKGDTAYFFSKKCNDDAKIYAFEPDANAFEILKIMKEKYKLNNVILENILFSNRNETIDFVSMIPNTPVVKMNATTIDEFVESNNIKRIDYLKMDVEGAEKHILEGAVNTIKKFRPSLAIAIYHGGELFMEDFYKVPIFIKEITENYEYYIRTFSPWGGETILFCIPKK >gi|343387528|ref|AEM23018.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase, complement(2746227..2746943) [Brachyspira intermedia PWS/A] MYILPAIDLKNGEVVRLVEGDYDNKTTYFKDPLEVLDFFIESGSSYLHVVDLDGASDGETINFKTIEKIIKKCDLFVEVGGGIRNEETIKKYLDIGVKRTILGTVAVENIDFTNNMINKYKEHIAVSIDSRDRMIAVKGWKEIKKEDSVEFCIKLDSMGIDTIIYTDISKDGKLSGTNLDIYKELREKISCNIIASGGVTFEEEIIKLRDMKINGAIVGKAIYEGRMDLKRIIEIAKQ >gi|343387529|ref|AEM23019.1| putative ATPase, 2747210..2748091 [Brachyspira intermedia PWS/A] MLILSESRINVIENIKTISRFKENKTEIKTLFYNFDYNNNINFNYNKYDNTSYNINISPVLKDNKIPKDDNIELNYNTIINNDDSASIEEKKLNIPNINNTIYMMNKKTDNVGNREETYITSNIEYNTLTAYLIEILKNKNEQPIIEMLSFFNKNIKAISVLNNDIYINIEGMNKLVILNLMGEGLKKYLSIILPIAANKNNVILADDIASSLDNETAKYLFKSILNLSRNNDMQMFFTINNYETLKLLHETVNDSEEFNDIKESINIINIANTEEEGFKSYNYNIDNVKELL >gi|343387530|ref|AEM23020.1| TPR repeat-containing protein, 2748398..2748562 [Brachyspira intermedia PWS/A] MSIFGYLFKKPIDKSKLEKSRLKDYDKAINFYEETLKNNKDLKIDPYHIKSYNK >gi|343387531|ref|AEM23021.1| TPR repeat-containing protein, 2748574..2748792 [Brachyspira intermedia PWS/A] MGLFEDAIKDYDRAIELDNNYFEAYCNRANAKYNLGLYKEALKDYKKALELDTTNNTVIENIKNIENKYGLK >gi|343387532|ref|AEM23022.1| hypothetical protein, complement(2748916..2749380) [Brachyspira intermedia PWS/A] MNYKIFNTIQQEYIAIQEYIDEIRNLNIISDIKVFNNKSLFIIYLMDNSFDKRIENIELNLRKKYRNAFNKNIYVEEFSSFYGNKNEADNEIKNCVITDITSNFSNVNIQKMKMGKNLIKQNNMNVYNPPMKNNIAYHISFYIVTLPPQNSLSA >gi|343387533|ref|AEM23023.1| hypothetical protein, complement(2749361..2749783) [Brachyspira intermedia PWS/A] MKDRGEINIAVANYFDNNFHDFSILNRRDGNNVQSKDELRHIIIGRWYYGLYLLAKEKLGKQYISHTGYFDKNNKRKLGIWETLDDNAKIKGLSYDFEKNGTLLFDMRNRYEYNGINVPDTMFQKAQTIYEDMYNELQNI >gi|343387534|ref|AEM23024.1| hypothetical protein, complement(2749797..2750309) [Brachyspira intermedia PWS/A] MWAHYANKHKGICIAYDITDFFNEKDVLLEKLMYTTKLTFDYKNELDNFFNIEDEYHRLESDNIYPLHLFLTKNVQWMYENEFRLIKYIGNINNIINIDGYDFIKYKDNENSDYKIKIRKKIHIKHIYLGKDIEGNDQKIIKEIADKKTIPVSKIKCKKSNLYELESYDL >gi|343387535|ref|AEM23025.1| hypothetical protein, complement(2750561..2751850) [Brachyspira intermedia PWS/A] MKCNCYGKIANFYFDRKEYLNAVYNYENILNILENIKNKDYELMLFTADNYFANANAYYNEFLKSGNMDNIEIMFEYYNKAIDSYNLIDNKDYNIIKNIGMCHYQIANINLKCNMHNLTVTNFDLNSKMFDICITNFNAAISNFQYILKNSVTNLLSDYQQFEINFKIAESYFYLGYIYYLYHLSSNVYQCYENAMLYYNDAFKLISNTDNIQNKIVVLNQMGILYSYFGNYKLSINIYKYAVNIIGDIKNIRNDPQLYLSIYINLASSYIKNKNYDEAIKISKYLYDNIENIGLNNEHDITSIILSLSIVYAITRKYDEAITILKKAINENYTHYDIYHNLGRCLIEKGNYQEGINYISKSNREQSKAYLAYAHLKLNENEKAYEILDELVKNNVNYDVFIIVYRMYEEALLDKLKSKDIIEKILKKI >gi|343387536|ref|AEM23026.1| hypothetical protein, complement(2751982..2752146) [Brachyspira intermedia PWS/A] MFLDDELERINIEDENLVMILQNIIVDLNKYEINDYNKVLNLLYEIEKNILNII >gi|343387537|ref|AEM23027.1| leucyl-tRNA synthetase, complement(2752279..2754840) [Brachyspira intermedia PWS/A] MEYNFTTIEKKWQKFWKDNQSFKTVSKPTDKKYYVLEMFPYPSGKMHMGHVSNYTIADSIARYYKLLGYDILHPMGWDAFGMPAENAAIEHKTHPAEWTLKNIANMKEQLNLLGYSYDWDREVTTCLPDYYKWGQWFILKMYEKGLLYRKGGDVNWCDHCNTVLANEQVTPEGTCWRCDGEVTKKKLEQWYIKVTDYAEQLDADLKLLEGYWPDNVIAMQKNWIGRSVGAYINFNLDDGKEFPIFTTRPDTIYGVTYMAIAWNYDGLLDMCTPEQKSAVEEFIKKSAKIDQKTDYEKEGVFTGRYVVNPFNGEKAPLYAANFVLAEYGSGAVMAVPAHDQRDFEFAKKYNIPVKVVIQNADNSLKAENMTEAYTEDGTVVNSDILNGLSSRDAIKRAIEYATEKGFGKEKVQYKLRDWLISRQRYWGNPLPFVHCEKCGVVPVPESELPITLPMDIEFTVGDNPLKKSESFVNTTCPKCGGKARRETDTMDTFTCSSWYYARYTDAHNTQMPFDPETANAWLGVDQYIGGIEHACMHLLYSRFWYKFMRDIGLVKGDEPFNRLLTQGMVLANSYESRELKKFYTQEQMNNKEYEKDGIRKEDIIVKMEKMSKSKANGVDPAEIIELFGADAVRIFVMFVAPPEKDKEWSDEGVKGSSRFLNRIWNLFLKYKDEEAFKNGKSFDYNNLSKEGQKLFRKYNKTIKKVTIDIKDRFHFNTAIAALMELLNDMSVIKLANNDDYAMFKEVIRGYLILLNPIAPHMTEELYQILNFGKMILEESWVEHDEQYCKDDTFELVFQVNGKIRDRVEADVNISEDDAKTQALASEKVKAFTDGKNIVKVVYVKGKLVNIVVK >gi|343387538|ref|AEM23028.1| hypothetical protein, 2755184..2755306 [Brachyspira intermedia PWS/A] MEIQNLNKSRVGVIITVITQKNNRTIITKKTIKQNGWELE >gi|343387539|ref|AEM23029.1| cinnamyl-alcohol dehydrogenase ELI3-2 (cad), 2755404..2756654 [Brachyspira intermedia PWS/A] MKKAILITMLVILYVLSCNNSSNAQTSVNTENNNAVNNQKNSSNAMYNQELKKAPINIQTNANGRVKTKGFAAVSANMDFKYHEFTRHAVGSNDVLIEILYAGICHSDIHVVEGKSSNTPLVVGHEIAGRVVQVGNTVTKFKVGDFAGVGCMVNSCGQCESCLDNLEQYCLNRAVYTYGSRDRFHNNEITQGGYSDNIVVSEDFAILIPDNAELDKVAPLLCAGITTYSPIQIMNVKKGDKIGIAGFGGLGSMAIKYAVKLGAEVTVFDITEDKRQDALNMGAVKYVNVNNTEDLKNVNNTLNYIISTIPAYYDVNMYMRMLKRGGTMCILGLPRTSKMPTLIAMVGQHGSKKLFGSLIGGIKETQEMLNYSIENNIYPTVEIIKADAQTISDAYRKVIDGKVKFRYVIDMRTINK >gi|343387540|ref|AEM23030.1| putative rubrerythrin, complement(2756746..2757360) [Brachyspira intermedia PWS/A] MLKRLLIISIFLIFSFLVYSQTPKTANNTLEAVSIAYDVEINSSFAYAKFSAASKNKAIVNLFQAVSDSKSWHANILYNAAIQDKITDTILQAKVGDPKVGTDIENLKSAQSMTSYEYTKMYPELLKVINKDNKKEMSNEMNNIIKAEKSHNALFTQAISNLQNNKPLSDKYYLCETCGYVEANSAPNKCPICGSAKNTFKEYK >gi|343387541|ref|AEM23031.1| putative methyltransferase type 12 domain protein, complement(2757396..2758049) [Brachyspira intermedia PWS/A] MEWYMDSKNKKSIIIEHYIERVKDFNIPEYKVLDWESQDAQEARFSALLSHFDIRKSILLDVGCGLGHLAEYIDKQNINTYYIGIDIMPEMIERAKHKKFKNINPQFMTIDFFKNSDTKDDFDYIYSSGIFNLNLGNNEEFLRNAVRDFLIAARKGVCFNLLDISCKEKYGDKYYYYKKDEVFNMVCDIVKDLDLKCQIKISDEYLSNDFSVFVDIL >gi|343387542|ref|AEM23032.1| aldose 1-epimerase, complement(2758075..2759118) [Brachyspira intermedia PWS/A] MEFFTMQVKNFGNGYLLYELKNENDMILKLTDIGASIVGVFFKDKNGNEVQVSFGSDDYSFYLNPHDYIGASVGRIANRTINAEFTLDGQTYNLTKNDNGKHHLHGGDKGISFQKFDSKVLDNHSVLFSYSSNEGDEGYPANADIDITYSLTDDNEIIIEYFAAVNAPTPINLTNHAYWNLNGEGEIYDHNLFIDSSFYLPVTDECVSTGEILKTENTPFDFTKTKKIGADIEKANGYDNCFIFNEKNILSNTNEEENNLNKLRASCHSDKTGITLELYTTKPAMHFYSGNMLNNREVRNTVLNKHNAFCFETEYLPGAVNFPHFPSIIFDADRNYSHKTIYKLSLK >gi|343387543|ref|AEM23033.1| transcriptional regulator, ArsR family, 2759272..2759547 [Brachyspira intermedia PWS/A] MKDYKKEAIIFKAFCDENRLQILDMIKNDEICACKLLEELKIVQSTLSHHMKILCDAEVVIPRKEGKWTYYSINKEGFERAKELLNYYIKL >gi|343387544|ref|AEM23034.1| predicted permease, 2759723..2760736 [Brachyspira intermedia PWS/A] MTIIKSIFIFIQDQIISMKWLNTLIGNILNNFALSETVKGIIQFFIYDVIKIFVLLSVLIFCISYIQSYFPPERTKKILSRFKGISANILAALFGTVTPFCSCSSIPLFIGFTSAGIPISMTFSFLISSPLVDLASLILLSSIFGMKIAIAYVVVGLVLAVAGGSLIGKLKMEKYLEDFIKNIKVNNTELEIQTMTKKERLIYSKEQVIETIKKVYLYIFVGVGIGAFIHNVIPSEWINTILGKNNWYSVPLASLVGIPMYADIFGTLPIAESLFYKGAGLGTILSFMMSVTALSLPSIIMLKKAVKMPLLIFFVFIVTLGIIIIGYLFNNFYFLFA >gi|343387545|ref|AEM23035.1| hypothetical protein, 2760788..2761099 [Brachyspira intermedia PWS/A] MFFNNNKKSQCNCGGSCQTSSEENARIKILGTGCNNCKKLEENTLKALKDMGINLTVGHVYDIEKIASYGVISTPSLVLDENVLSYGKVLNKDEIIELLKDKL >gi|343387546|ref|AEM23036.1| hypothetical protein, 2761221..2761475 [Brachyspira intermedia PWS/A] MPDPLEDEGIEREVEKILLLGNDDENSLDMLDNLRRAILDLNLDLSIKYTDSKGTMSYYGVMTLPALIVNDELISYGEVLDREK >gi|343387547|ref|AEM23037.1| hypothetical protein, complement(2761514..2761726) [Brachyspira intermedia PWS/A] MAKSSFASSIAAIVFSSSFLQLAQPVPNIFTLASIGDSFVVSSSTKGVIDGPQPHPPFPNKISFNDMLSP >gi|343387548|ref|AEM23038.1| hypothetical protein, 2761743..2761868 [Brachyspira intermedia PWS/A] MAEIASYGVMSTPALLLDDKVLSYGKVLSKEEIIKILKENL >gi|343387549|ref|AEM23039.1| carbohydrate kinase, PfkB family, 2762051..2763073 [Brachyspira intermedia PWS/A] MSYIVGFGEIMLRLSSIDNERLFQSSKLNATFGGVEANICVLASIFGLKSRYVTALPNNAVGKKVEELLLSHRVDTSAISWEGKRLGIYFVDPGNNYRSSNVIYDREYSSISQALIEDFDWDKVFNDASYFHISGVTPAISQTAADLTLHAVKEAKKRNVKVSCDINYRKKLWKYGKTIEEVMPEIVKHSDIVFANEYDAVKILGVKSNVDVDGNISDEDYMDIMQQLINKYSLEMTVTTKRETISSNHNNIYCMLYADKKLYKSKKYYIKNIIDRIGTGDSFAAGILSGIQLFDNYQDILEFATASFCIKHSIPGDWNLTTKEEVINLMKSENGLDVKR >gi|343387550|ref|AEM23040.1| transcriptional regulator, GntR family, complement(2763079..2763786) [Brachyspira intermedia PWS/A] MPKAKNNNADNLIILDREINEPIGDYAVRCLEYNIINMTLLPGTFISEKIVSEVLSISRTPIREAFSRLEKINLIEIYPQKGTMVSLIDTSIVEETSFMRMVLEKEIIKMVCKNHSEKDLKLLNKNIEQYEKNINTNKVYDLLKLDNEFHELLFSMADKKLTFSLIRDSIKHFNRARIFNIMEMDRTRTLTEHRNILLYIKEKNIKKLLPIMEVHLTHVKDDMVFLKNKFPEYFN >gi|343387551|ref|AEM23041.1| hypothetical protein, 2764123..2764971 [Brachyspira intermedia PWS/A] MLFAQQAANTQTNPAYQFFNVYPGSMKMLSFYIEYASGDLTSLGTDPKAKRMMENFDTKLTYMQTLKSVPWLGFGFILQAQFDNPSVYDPSWKEGSRTGKNSSNPFSMVELTGNMHLFNTFSLGFTSTGDFVFVMYLNKKLPDVAAFKSHSITFMAQQNIYLRGNQYNSQTGALTQGWYDGTEFRVAYQMRFNDWFALRPEIQFKILSGAQTSFKDWYWIRFNPRLQFFLEEWTFFIEPRLFYGGIFKQDMSALGIGSSQFNKNGWGFELKVGIDLTKLFFD >gi|343387552|ref|AEM23042.1| beta-D-glucuronidase, 2765026..2766825 [Brachyspira intermedia PWS/A] MLYPRESKTRRVIDISGMWEFKIDSNNEGRKNGYANGLKDTTFIPVPSSFNDLFTDKNIREHAGDVWYETSFYLPSEWKDKDVNIRFGCATHEATVYINGKEVCTHVGGFMPFNAPVNEAGIFGEKNKLVVVVNNELSNTTIPCGHTETKPSGKKYIKPSFDFFNYAGLNRPVKITVTNKEYIHDIDIVSDINGGDGIVNYEVHTTGENKVYIKILDEEGNEAANAEGKSGKIVIKNAKLWNPKASYLYKFIACIKNGDELIDEYYLDFGIRTVKVEGTKFLINGKPFYFTGFGKHEDSEIAGRAYNPPIIKRDFELIKWIGANSFRTSHYPYSEEIMQAADREGIVIIDEVAAVGMFDVGSVLNPGASKTDYFSLDEVHNKTKEVHKKAVEELIKRDKNHPSVVMWSLFNEPDTSKDEAVPYFEDIFNFAKSQDKQNLPKTFAAIQASSPGKCKCMHLCDVITLNRYYGWYFLGGYEIDMSEEKFKEEMNLYSSMNKPVMFTEYGADTYAGVHKLPSVMWSEEYQCEYYEMNFKVFDSYDFIIGEQLWNFADFQTTEGIFRVDGNKKGIFTRNRQPKAVAHYIRNRWTKLPLDYKSKK >gi|343387553|ref|AEM23043.1| sugar/sodium symporter, 2766896..2768335 [Brachyspira intermedia PWS/A] MDNTNTYHRAKIWQIAFFAFNNTATNLYMFFMFFISYYATGMLGLGVVLVSTLLTVMRIWDAVTDPFVGYLLDKTNGRFGKNRPFIVAGNIVMIISCIIMYKFVYKAPQNMRLLFFILVYAVYIIGYTLQCVVTKSAQTCLTNDPKQRPYFTIFDGSYNVVLFAGMQIVVSKVWIPKYGGFNADFFNTFLIFTIIVSACLSALAVIGLWTKDRTEYFGLGKPQLITFKDYWTVIRKNRAIQMLVIAASTSKLFVTIQTNSIVLVMLYGIICGNYALSGEVSAIYSIPSIIIIILGMKFVASRLGQRKALLFGTIGCIIFAALLALLFIFGDPKTMSFTNLNFFTIAFIVLWILMQGFAGISTNIVIPMTADCADYETYRSGKYVPGLMGTLFSCVDKIISSFATTIVGLLIAMIGFKDTQPTPDTPYSTAIFWVTMFCVFFAPMIGWVLNIIAMRFYPLTKEKMEEIQGTIAEIKAKNS >gi|343387554|ref|AEM23044.1| Mannitol-1-phosphate/altronate dehydrogenase, 2768403..2770028 [Brachyspira intermedia PWS/A] MKLNIENLNDKTFWKNSNIKTPTYDIKQIRKNTSEKPTWVHFGAGNIFRGFIAAVADTLLNENIIDTGIIAIDTHAAGRDDDYEMIDKVYKPFDNLTLLASIKSSGDIDKKIIGSITDVVHADFINNYEELKKIFISNSLQVASFTITEKGYSIKDLNGNYNITVKEDINNGPKKAKNIMSISTAMLLERYKNGAYPIAMLSIDNCSNNGDKLKSSIIDIAKEWVKKGFADEGFIKYLEDDKKTAFPLSMVDKITPRPSEIIAKKLEEIGLEEMSVFKVGHNNMAAFVNAEVPEYLIIEDLFPNGRAEFEKAHVYVTDRITVQTSEKMKVTTCLNPLHTALAVFGCLLNYNFIYEEMKDPLLKKLVEKIGYDEGMKVVADPKILNPKDFIKEVIDERLVNPYIPDSPKRIATDTSQKIPIRYGETLKSYIKNGLDTSSLIGIPLTIAAWLRYLIGIDDNGKPIDISPDPMLEELQKHIKNIQFKNKESIGNNLKPILSNKVIFAVDLYDKEINLGEKIEGYFREMIASENAVKECLNKYIN >gi|343387555|ref|AEM23045.1| mannonate dehydratase, 2770060..2771121 [Brachyspira intermedia PWS/A] MTLRWFGKNFDSVTLKQIRQIPGVKGVITTLYDSKVGDAWKEEDVKALKKEVEDSGLKIYGIESVNIHDDIKIGLPSRDKYIENYIKTLEVLGKEGINLVCYNFMPVFDWTRSDLAKVRPDGSTVLSYDQDIIDKIDPQKMFEQIDSSSNGFVLPGWEPERLSRLKELFEMYKGIDDEKLFENLKYFLTAIMPTCEKYNIKMAIHPDDPAWPVFGLPRIIVNKENILRMVNSVNSPCNGVTLCAGSLGSNPKNDIPDIVRSLKGKIFFAHVRNLEHTAPGKFQEAAHLSSDGSMDMFAIMKAFYDIGFEGPFRPDHGRAIWDEVSMPGYGLYDRALGAVYLQGLWEAIEKMGK >gi|343387556|ref|AEM23046.1| glucuronate isomerase, 2771215..2772621 [Brachyspira intermedia PWS/A] MKTFMDKDFLLYNETSKTLFHNYACKCPIFDYHCHLNPKEIAENKKFKNITEIWLYGDHYKWRMMRANGIDEKFITGDASDYDKFIAWVKTVPNLIGNPLYHWSHLELQRYFDIYEVINEDNADIIWEKANQKLQNMTIKDILKKFKVHTIGTTDDPIDNLEYHKLIKEGKAQIGQINTKIVPSFRPDKSINIEMPDFSDYIKKLENASKINIKDIKSLIEALYNRIDYFKNLGCVSSDCSLSTVPFNLDEEKNIDNIFKKAMNKETLSNEDIEKYKTYILIKLIKKYKESNLVMQIHISAMRNNNEVMFKKLGPDTGYDSVGDSNIIEKLSLLLKTANNDGGLPKIIFYSLNHKDYYPLSTLMGCFQEGGIKGKMQLGSAWWFCDNKDGMEEQIKILANTGSLALFVGMLTDSRSFLSYSRHEYFRRILCNIIGEWSEKGEVPNDIKYLGNIIENICFNNSNIYFNN >gi|343387557|ref|AEM23047.1| 2-keto-3-deoxy-6-phosphogluconate aldolase, 2772668..2773300 [Brachyspira intermedia PWS/A] MLEKYIQNKIIPVVVIENEEEIRNVAELCLEFLPSIELTLRTEYGYKALEILAKDYPTLPRSAATVLNTEQVDRILDLGTNIIISPGFQPIMLEYAKKKNYHYIPGAATPAEIEQCLAYGHKYIKFFHAGLYGGINWIKNIAPVYQHTGVKFMPLGGVSIDNAKEYLQNKNVFACGGSWLCPRNLMEEKNWKEIKRRFEEAHHLIKELGI >gi|343387558|ref|AEM23048.1| O-linked GlcNAc transferase, 2773447..2773836 [Brachyspira intermedia PWS/A] MISEENKYFYSALSNIQNKKYDEAIGDLLKVIEIDNDNLDAYHNLARVYYEIKDYDKAIETYNKSIEIYPHDSDTYYYRAEVYMAKKDYDKAIEDLEKAIVKNKAYSDAYYLMSVAYRKKRNIKKLLNI >gi|343387559|ref|AEM23049.1| ThiJ/PfpI domain-containing protein, 2774095..2774715 [Brachyspira intermedia PWS/A] MQYYKYKILYNIGKLVNKGDDNMSKKVLVPLAEGFEEIEAVTIVDVLRRANIEVVTASLTDNLDVKGSHNIFIKADTTLEKIMNYDFDAIALPGGMIGMNNLKADMRVIEKIRDMYESKKLVSAICASPIVLGEAGVINGKYTCYPSCEIYVKGGEYVEKDLVVCNDNVITSKGPATTVFFALEIVKYLNGSNEELANALLVPLIK >gi|343387560|ref|AEM23050.1| nucleotidyltransferase, 2774742..2775728 [Brachyspira intermedia PWS/A] MKVIIPAAGEGSRLRPHTITKPKPILPIAGSTIIDFIMTEISSIQDLEEVIFIVGYLKDQMIEYLSNKYTNIKLTFVEQKEYKGLAHAISLTKEHIKDDDKIFIILGDTIFKLNLSNIVSKNENSLGVCEVDNPSRFGVAVLNEQGVITKLVEKPQEPISNLALTGMYNIVNTKELFEAIDYIIKNDIKTKNEYQLTDALEYMIENSIIFKTFKLDGWYDCGEKSTMIETNKSIIKHEILSKGIKDTAIIPPVFIDKDVKIENSVIGPYVHIGKNSKIENSILKNSIIFEEVNISNAFMDNSIISEKVTYKGKTHSMDIGASITIEQN >gi|343387561|ref|AEM23051.1| hypothetical protein, complement(2775803..2776234) [Brachyspira intermedia PWS/A] MENIIVKYLEFVLACYVVRFLATRFVLEFQSVKKFYYRREILPGVRNWNNRIKMIYYFEFFSFIQSLLIALFFMVFSHFVPLKEHLKLIIGFLTYSSLIIADKVRFSILLTNYPYSLLIMDTGIFLFVSFLQFIVMAFMNATL >gi|343387562|ref|AEM23052.1| radical SAM protein, complement(2776237..2777676) [Brachyspira intermedia PWS/A] MSFLILADKTFSNEFSEEFDSIFNDKINILKEKLNCDVKYIENNDLEKIENYLNNIYKESENYDNIIYIPGNMPLFNEDETIKLTKIHEENISYFSYGENYPSGIVPFIIRRTAFEKLFNIIKTKDIKVSENAINNIVFVDPNFFEIEILISEHDMRYYRLSLFADSKRNAILIKKLINYKDYNEMVKAIEENPSIRRTLPSFVEIDINNRQNVLNKYLLKNETIKNELSKEEKNITLDEFKTIYDKLYNFCGDFHMSIGSYYEPLLNKDVFDILEYSTRNKNVNVYLETNALLLDSDNAKKLLSMQSERNNLHVIIHLDTVEEDVYNKIYDNGDLKTIMSNIDYYLLREPKNTYLQITKQKDNFDYLASYYKYFDKYKVDIIMQKYYNYRGMIDDNRVGDMAPIINIGCWHLSRDLFIDSYGDVYICRFDINKEKKIASIYEENIDNIWKTLENYFIDNVCKKLDFCKNCDEWYLYNF >gi|343387563|ref|AEM23053.1| hypothetical protein, complement(2777700..2778407) [Brachyspira intermedia PWS/A] MKDIENILGEEKIIHKLYDDDPVIRYIKSFDNVLYADYSYSGNDSYETYDSLIGLFAYHKDDKYLFCEFGYFKENREELKLIVSDYPEYITLDNYELTNEVFNDLINLHNISMNQFSALMIGKNEIDNIKSNSLKKITLDEFIEIFPHRYINNRIRFSSKDKRYERIYIDDISEDLIYRCSYCGSSNLSKIVNNDINNLQDIDVLDYDDDAEKSLYICKVCGLISRSPDNIMDYI >gi|343387564|ref|AEM23054.1| peptide chain release factor 1, complement(2778427..2779479) [Brachyspira intermedia PWS/A] MVEKTYEDIVQKLNDANIKDNRVIQDLMKKKSEIEDIVEEYKKLKVVLKEIDESNEMINNPDTDKELKDMALLEIEELNQKKEDIINGLRLLLLPKDKNDGKNIIVEIRVGTGGDESALFVGDLFRMYTRFIERTNLKMEIIDTSPTELGGYKEVIFSVSGKDAYRTLKFESGTHRVQRIPATESGGRIHTSASTVAVMPEAMESDVVIKDEDIRVDIFRSSGPGGQSVNTTDSAVRITHLPTGLVVQCQDEKSQHKNKAKALKVLRARIYEKEEAERKAKEAKERREQIGSGDRSERIRTYNFPQNRVTDHRINVTLYKLDRFMDGEITEITDALFKKEQEDMLASYSD >gi|343387565|ref|AEM23055.1| hypothetical protein, complement(2779592..2781211) [Brachyspira intermedia PWS/A] MVSIKRQRQIKLFFILSIILIVIISLFIIFGYFPYGLHKKNMSEVKMPKDNIAYVSVKSLDKSVLKFSDSIYAYRISHDESMYDFSILLRKADAFADRLRTNDNFLVKMASKPILRRNAALLFWGYNGSLDNSEIFYLFDIGRLNSFIFKSFFNSENLTIDNITYEVKKINYNGSRIYALDNGSPYLFFNFYKGLLIVTKNYNHIKKLIDFLNSDTDGISEVKLLNNVENKYESDISFYVNKQLFDYNKCEGSLLFTPLQFFDNAYSIYGNAKINNDNGLMDIFVDYEYGGSERYSLYGLDGSIDIQNYLPKERTVMYFALKSYLAGLYPIMYNDLKMDHNNKLYSELYNLFTKMNDVYSFGSIINDLYGEMAVAYIESKRSELIYPLMIFNIENDTALLPKLEVALLEKYPNLIKKERNYNNSYIYSYDLNNGNMFYYTFVDKVYFVSENEKAIETIIDSVYDGESLDTYIKSQISKNINPDYIFTIQLAKSQDILRYFNIPLRTWSYPNSIIIGSTINSNYTHINIDFKANFNSVSK >gi|343387566|ref|AEM23056.1| putative flavoprotein, complement(2781352..2782566) [Brachyspira intermedia PWS/A] MHCVRKVTEDLYWVGANEHRLALFENVHPLTKGVSYNSYVLLDEKTVLFDTVDWAVCRQFLDNLEYVLNGKKLDYMVINHMEPDHAASIDEVLIRHPETKVIATEKAFMFMDQFGFTIPEEKREQVKEGDSKKFGKHEVAFVAAQMVHWPEAMVTFDTTNGVLFSADAFGSFIALDGRLFNDEVNFDRDWLDEARRYYTNIVGKYGPHVQNLLKKAGGIIDKIKMFCPLHGPIWRNNLGYILDKYNKWSTYEPEEKGVLIVYASMYGNTENMVGVLAAKLAEKGVTNIAMHDVSSTHVSYLIADTFKLSHVVLASVTYNLNIYPPMHSYLDDMRALNVQKRKFAIIENGSWAPKSGALMQEFIENNLKQCEILDAQVSVSSSMKAANVGEMDALVDAIVESINK >gi|343387567|ref|AEM23057.1| acyl-CoA dehydrogenase, complement(2782610..2784529) [Brachyspira intermedia PWS/A] MFKTTEKHEELRAKIRAWAEEVVTPIAHEHDQTGKFPTEAVKQLGKGGLDIMGLPFETKYGGAGFDNIAYAIAVEELSRVDGSMGVILSAHCSLGSYPIYAFGTEEQKKKYLVPLAEGKKLGAFGLTEPEAGSDAGGTETTAELKGDHYILNGEKIFITNSIEAESYVVFAVTTPGIGTKGISAFIVEKGWEGFEFGEKYDKLGIRASATAQLLFDNVKVPKENLLGKEGQGFKIAMQTLDGGRIGIAAQALGIAQGAYEAAVAYSKERIQFGRPIAQQQAIAFKLADMATKLRAARLLIYSAAAMKDRHEPYGTESAMAKLYASEIGLEVVNQALQIHGGNGYIKGAYIVERAYRDAKICTIYEGTSEIQKVVISAAILGKMPKAPVAAAGPMAKKGPITGERRNIIFKEGSAQDKVDALVAALKKDGIDFSVGIDINTPIVNAERVVSAGKGIGGKENMKLVEDLAKAAGAAIGCSRPVAEELKYLPIIRYVGMSGQKFNGNLYIACGISGANQHLKGIKNASIIVAINIKGSAKIFKNADYGIVGDVKEILPLLAKALDTGAKKPAEVPYKKMKKITPKKTIELPKIYVCSGCGYEYNPFIGDPESEIAPGTDFTALPEEWVCPECSEEKANFIKA >gi|343387568|ref|AEM23058.1| acetyl-CoA hydrolase/transferase, complement(2784598..2785944) [Brachyspira intermedia PWS/A] MDFKALYKQKLTTADEAVKVIKSGDWIDYGWVTATVIDLDKALAKRLPELTDLNFRGGILMWEPEIFKIENPEKHITWNSWHMSGLERKAVDKGFCFYDPIRYSEMPRYYRELPRGIDVAMFQVSEMDENGYFNFGPNASHMQALIERSKCVIVEVNKNMPRCLGAANIGGEAVHINQVDMIVEGSNTPIKEMPGGGATEVDKTVAKLIVEEIPNGACLQLGIGGMPNAVGSLIAESDLKDLGVHTEMYVDAFVDISLAGKITGSKKNIDRGRQTYAFGAGTKKLYDYIHNNPECLSAPVDYTNDVRVISSIDNFMSINNAVEIDLFGQVSAESTGFKHISGAGGQLDFVLGAYLSKGGKSFICLSSTVTGKDGQLKSRIVPSFANGTVITDTRANTHYVVTEYGKVNLKGLTTWQRAEALISIAHPDLRDGLIKEAEKAKIWRKSNK >gi|343387569|ref|AEM23059.1| ABC-type oligopeptide transport system, periplasmic component, 2786663..2788279 [Brachyspira intermedia PWS/A] MNIKRILFIFTLLIIISCNRKNSAIDPTRDIIINMGSEPVTIDPTLNSIGVVGTYLLHAFEGLTKIDKNNNIAPGIAEKWDISDDGLIYTFYLRTNAKWSDGKPVKASDFEYGWKRALDRNLDSPYSYMLEIIKNAKNINLGNMDITNLGVEAIDDNTLKVVLETPSLYFLDFLASSGVFLPLRKDVIEKYGDKWTLKPKTYVCNGQYILKERIKDEKIVFEENPFYYDKNEIIAKRLTFIPSADVFDMVEKIKKNELHFSSLEPSPGEIEYLMKDGYIKLNEAIGTIYLELNITNDALNDKRVRQALSLAIDRKYLVEHVVKGAQTPAGAFVPPAVKGSRFYFREESSNFINIDKHNENIIKAKELMTEAGYPNGDNYPILELKVSPGLFYEVGKAIQKMWKDNLNIDIDLIEEEFPATLMALTKKKYQIARMGWTGDYYDPMTMLDVMVSYGGVNHSGFSNAKYDKLITEAKTIYTNNYLRMENMKQAEAILLDEMPIIPLYYKADSFIVSPYLKDIVLNPLGRHRFNYCYIDLNQ >gi|343387570|ref|AEM23060.1| ABC-type oligopeptide transport system, periplasmic component, 2788374..2789960 [Brachyspira intermedia PWS/A] MKKFLILIVILSLFIFSCSSSKTKDDSIVVSLGGEVATIDPHLNTASAGTVYIRHFFEGLMKKDKDGKIVGGMAENYKMSEDGITYTFYLRTNAKWSDGVPVTADDFVYSYKRFVDPKTAAPYASLMAPVKNALKISSGDVNVEELGIKKIDDYTIEITLENPTAYFLELADMFVPVRKDIIEKYGDDWVSTPESYIGNGSYKMTERVRDDKIVMEINTNYYDKDSIVAKKITISMISDKNTALAALRNGQIHFSNLVPTQEVDNLQKEGLIVMNQAYGTVFFEMNLTNEALKDSRVRRALALAIDRNYIVDSINKSGQKPAGAFVPPLISDYEGEFREKGGDYISVQSNDYQKNIEEAKKLMAEAGYPNGENYPVLEVLVANDGNVVMVEAIQQMWKNIGVDAVIVPREWAVILQSFRDLSYQMVLSGWTGDYNDPMTMLELYLSYAPSNPGYNNPEYDKLIESSKHIVNPQERMKVLHEAEKILMYDMPIIPIHYRANALMVSKQLKDYKLDPLAKYRFHYSYLEK >gi|343387571|ref|AEM23061.1| hypothetical protein, complement(2790359..2790922) [Brachyspira intermedia PWS/A] MLYILYIISALFLLITIFFIKVNYLIYIAIAFFILHIIFTKSVFMTIKKLLYLIPYFLAIFIIQALNSRGEYYNLFGFYIDKVGADFTIIYFIRIASVLYFLSIFFIIIKKLKVPNGYIFDEMIRISIFMKIVRKSFFAEFAKIRDKNKTFQEKLNLIKNLLENVYNDSFRLYPYDMLISHYRNLKK >gi|343387572|ref|AEM23062.1| translation elongation factor P (EF-P), complement(2790922..2791485) [Brachyspira intermedia PWS/A] MLPVNDLRKGDAIILDGETYLVVDAHFHRAQQRKANVKTKLKNMLKGNMIEKTFSSTESVEEADLSYKKAQYLYEEGDSYVFMILDNYEQVHVSADILGDSKYYLLDSCEVDLQYINDEVTAVRFPIHVILEVTYTEPGFKGDTTGTTLKPAKLETGIEVNVPLFINIGDKIKVDTRDDSYVERVNK >gi|343387573|ref|AEM23063.1| ATP-dependent protease ATP-binding subunit, complement(2791568..2792800) [Brachyspira intermedia PWS/A] MSKKNNDKKEVCSLCGRELKELSRYIEGNEGYLCSDCSSIANDYFNMNMQKKKSKEKDYDIKIVPPKQIKALLDEYVVGQDYAKKVLSVAVYNHYKRITQNTEDKNDVEIEKSNVLLIGPTGSGKTLLARTLAKALNVPFAIADATTVTEAGYVGDDVENILLRLIQNADGDIKLAEKGIIYIDEIDKISRKSESRSITRDVSGEGVQQALLKIVEGTVATVPPHGGRKHPHQDNLHIDTSNILFICGGAFIDIEKSIAERTSKKGLGFAAEVNSMDNLNYDEIMKNIATEDLVKYGLIPELIGRLPVIATLEELKEEELLKILKEPKNALTKQYQKLFSYDNIELKIDDEALKSIVKKTMEEHTGARGLRALFERVMLDAMYDMPTDDKEKQVFELDKKYVNEKLGIDD >gi|343387574|ref|AEM23064.1| ATP-dependent Clp protease proteolytic subunit, complement(2792980..2793561) [Brachyspira intermedia PWS/A] MTIPYVIEQTSRGERSYDIYSRLLKDRIIFLGGEINDDVANVVIAQLLFLESADPEKDISLYINSPGGVVTAALGMYDTMQYVKPDVATLCVGQAASAGALLLAGGAKGKRFATANSRIMIHQPSGGSRGMVTDMEIQLKETIRLKSILNNIMANHTGQDIKKLEADMDRDYFMSADEAKEYGIIDKVFSSRE >gi|343387575|ref|AEM23065.1| trigger factor, complement(2793620..2794930) [Brachyspira intermedia PWS/A] MDIKDLNFETSTDEKDLVTLKITISKDAYDKELEKQIEYYKPRVNVKGFRVGHAPNNIILSRYREALEGATNEVLIEEAWNTYHDEKNVKALGTPKLLNLDKKDDGLHLDYEYYPIPEFNLPDLASINVEKNKYTVDDNVVEEAYKLSLQRFSHFEESELKSELGDRVFVKIEFDDDANKKYDKELTVVASDDENESIFAKNAVGVKKDDKKLLKTFVDGREATLIMNIVKVEKPDMKDDSKEEDRQKVKESLKEHLIKRAEDRANSELINDTLFNKLIELVNITLPKGYFEEQLEISLNEFERSMSSRGMSKTDFLISVAKTDEDIKKEYEENVRKQITFDMIMAKLSETYKDSITVNEEKAKEYANRMYQYQSYMGLAKLPKEEQQNIINYIMRDAHTRATSEAIMDYVKEHVNVSEKDAGEFKPEESDVWGGY >gi|343387576|ref|AEM23066.1| putative hydrolase, HAD superfamily, complement(2795157..2795948) [Brachyspira intermedia PWS/A] MIDNIKLIATDLDGTFFNSNSAISDYNKDVFQFLMKNGVEIILATGRALNSVKHYKNILSNDNYSIIFNGAAIVDNEGNFIYDKVIDANTSKSIINIYDKYNVYLHVYKQNIHIASDIDFYLKRYIEKEKVNDVAIGLENIEDFEFNKMVFIGDREELERLQNDIRNSFNVHTCFSHTNFLEVLASGINKGSALEWICSQKGIKRDEVIAFGDNYNDIEMIEYAGVGVAMENAEEALKKKADYICLTNDEDGVGKFLKKYMKF >gi|343387577|ref|AEM23067.1| ribonuclease HII, complement(2795988..2796668) [Brachyspira intermedia PWS/A] MDMFLDNKADKFVYEREYLSLGYKYICGIDEVGRGCLFGPVTVAAVIMPLELYNETELINENIVEGVDDSKKISAKKREELYDKIIDKALCYSIYSVDSKTIDEINIYNAVKLAMVNAINGLNIKPDILLIDAVKLDTDIKQCSITKGDSKSYSIGCASIVAKVYRDRMMNELPDSYQKYKVAKNKGYGTKEHMKYIEMYGPSDMHRYSFEPIKSNYKETENDLLL >gi|343387578|ref|AEM23068.1| hypothetical protein, complement(2796692..2801815) [Brachyspira intermedia PWS/A] MAANDDITKKDLSENNDNKIVNISERLDKLEKDVESILSDDKITDEEKENLIKEILQNEEFLQSAAETINKDSSKYDELINELKEQLSNSFDDKIDEKIEKNNANYNSIMLEQNLKNFKDISNLRKNQKDLENSITENNTKYDDIVNNINDINDKLDTNSEEYKKDIKILNSKLEEYKEEHSKFLEEEIEHFNNLKEELSNNIEEKIDEKIEKNNANYNSIMLEQNLKNFKDISNLRKSQKDLEENIKENVSNIVTSSINENNLKYDEVINNINNKLDTHSNEYKKEIETINSRLEEYKEEHSKFLEEEKLDNLKEELYNSFNDKIDEKIEKNNANYNSIMLEQNLKNFKDISNLRKSQKDLEENIKENVSNIVTSSINENNLKYDEAINNINNKLDTHSEEYKKEIDDLNARLEETKEDNVKFFEEEKSNLKKNYEDILIDIKDINEQMERYKSIYDEKLSTAENQFSTLILDQNLKNYNEIDNLKKDHSDLKDVVERIDNTLSINSLKYDDLISDINNKLSDNSLKYRRELESLKSKFEESREEQDKFLEEGKENLNNLKEELSNNIEEKIDEKIEKNNDNYNSIMLEQNLKNFKDISDLRKNYKDLENSIKENIANTVYASVNENNSKYDELIKNIDDKLSSYSEENKKEIEGLNTKLEEAKEEQTKFLEEEKESFNNLKEELSNSIDEKIDEKIEKNNANYNSIILEQNLKNFKEISDLRKNYKDLENSIKENISNTVYASVNENNSKYDELIKNIDDKLSSYSEEYKKDIDSLNTRLEEEKENLNNLKEELSNNIEEKIDEKIDEKIEKNNANYNSIMLEQNLKNFKEISDLRKNYKDLENSIKENISNTVYASVNENNLKYDELIKNIDDKLSSYSEENKKEIDSLNTRLEEAKEEQTKFLEEEKETLNNLKEEFSNIVNEKIERSNASYGSLMVEQNLKNFQEISDIKKSCEDLGNSINENNAKYDELIKNIDNKLFTYSEENKKEIDGLNARLEEEKENLNNLKEELSNNFDNKIDEKIDEKIEKNNANYNSIMLEQNLKNFKELSDLRKGHKDLEDSILSNNAKYEEVLNNINSINDKLDSTSEENKKEIDSLNARLEEVREEQTKFLEEEKENLNNFKEELYNNFDNNIDEKIDEKIEKNNANYNSIMLEQNLKNFKDLSDLRKGHKDLEDSILSNNAKYEEVLNNINSINDKLDSTSEEHKKEIDSLNTRLEEVREEQTKFLEEEKENLNNLKEELSNSIDEKIDEKIEKNNANYNSIMLEQNLKNFKELSDLRKGHKDLEDSILSNNAKYEEVLNNINSINDKLDSTSEENKKEIDSLNTRLEEVREEQTKFLEEEKENLNNLKEELSNSVDEKIDEKIEKNNANYNSIMLEQNLKNFKELSDLRKGHKDLEDSINENILKYDELINQLESKIANFNNSKEESFLDNENNYNNDYNIDEKIDEKIEKNNANYNSIMLEQNLKNFKELSGLKKAQKDLEDSILANNSKYDELISQLESKISNFNNSKEESFLDDENNYNNYNIDEKIDEKIEKNNANYNSIMLEQNLKNFKELSDLRKHYKDLEEEINRLANRDNHYNTNDTNFEEFADIINKRLNNQEAKNDEFIKAVNDILNRNNIKYEQLLDSVNRKSEVNNVRDNTEYVRYVKNHDERRKDINDNKVAKDIKRLDKKISDVTILSISIFAIIVVIFLAYQLL >gi|343387579|ref|AEM23069.1| DNA polymerase III delta prime subunit, 2801996..2803390 [Brachyspira intermedia PWS/A] MAKVLGQTTPLKIMSGIYKSGRLHHAYLFYGDEGIGKFESALNYAKAICCERGNGTYCDECKSCKMIDQYKHPDVIVAGTDERFRNAELYFNQYLEYKMPHLFNNFYSACRSILYKVESMLFDSYDNYPTSEPKEYMLGSKKETSRYALIEPYYLAVNYTLNELNADNVEFIDSIFRNKSKEALNIAKNKGGKKKISIEGDFFSALKKIHYNIIHTVIPLDTVRNIIELTYRKPRISNKRIIIIEGIELMDKRAPNIFLRTLEEPSDNNIFILITSDTNKLVQDGMKPLRSRMMELKFSPLSENTLRSILMKRLRLNEEKTALALENSYGSVAKAVKYVLDKKSNTSDNIYKVLLSFMDAALNNNPSQIASLATLLSDGDYEIADAFREMINILKKSLEDKYLEIENRDYILPSSISDESIVWTIDELDSTINTLINTNTQPKMLLYKTLGNIFTWLHNYNKNI >gi|343387580|ref|AEM23070.1| hypothetical protein, 2803400..2804446 [Brachyspira intermedia PWS/A] MKKLFLVLSVMILALSPVYAQDETTADTTATETTETTAETTTENQEAAGTNTVNEITSFGPSFTDLRNTDDVALDKEYNLLQTNLTKMREDYLFRVLYKANKILERYTNVNFTDTNEMFYNAVYYYDLVANPLANDNNIDIALQELDKSFKLYDDIKPIYEILGKTNELKQADYELNLYAGIFNLFKGTAGYYAKSRYHLVNALNNELTGANDTQRLIMLNTYLAGVNYNLATINQNSDVSKVYFLNEMFNNLWDLTTLKTEDENIKTAKYKLLITKYHKVLYTTSERFRTTYAKYYDELGFTYGQTEDEILSREKMPVFRDYENEAADPATTTDTTTTETETTEAAN >gi|343387581|ref|AEM23071.1| superoxide dismutase, 2804629..2805213 [Brachyspira intermedia PWS/A] MKLPYGKEDLAPYMSSNTLDFHHGKHLNTYVTTLNDLVAKDSALQGKSIEELITLSHNNADKQAVFNNAGQVYNHEEFFKMLKKDVAIPAEVKSKIEADFGSFDAFKEAFTTGGKTQFGSGWVWLVMNNGKLEVRKYANAMNPVADKVHGVLTCDVWEHAYYLDYQNRRPDFLTTFVDHLVNWDYVAERIKLAK >gi|343387582|ref|AEM23072.1| rubrerythrin, 2805258..2805794 [Brachyspira intermedia PWS/A] MKDLKGTKTEKNLNEAFAGESMARNKYTYFASVARNEGYEQIAAIFLETAENEREHAKVHFKYLNGIGDTLQNLQAAWEGENEEYENMYPRMAKEATEEGFDEIARSMKLIGDVEKEHRERYAKLREAVKSGSVFKKATKVQWKCRNCGFIVESEEAPELCPVCKHAKKFFEVRVENF >gi|343387583|ref|AEM23073.1| hypothetical protein, complement(2805881..2806978) [Brachyspira intermedia PWS/A] MTMTTIKDNNLFDVYKMYFKHGDFNDFSNVKRNHILSSLIREIKIINAKKDSISEKEIESIYDILVKLSVMARIDLIMAMKGIKSKDISFIGGIKRSKDVIDYALKIIVKLLYKLDEEQITSHYTNKFIDNDSISHTSRVFIITVRFMKYYNNSINNNIVSDIRKKFKKRYSNYYKNVLRKFNISKKITRLEHVYKNGLRDILFNELVNIAISAFWHDISNLSNNYNKDYNTSKCYSYLKHFVKYNYDISLTVGLHNEYYGYGNGVFLNYYNTIINSNTLFAPNYIISFDYNDTLKLNSVSYFPSKVLEIIDLFDRITYSNNSSVNNDDALAFISDNYLDKEVKVDPIIFDIFSSFVSDNIKLIA >gi|343387584|ref|AEM23074.1| inositol-5-monophosphate dehydrogenase, 2807259..2808380 [Brachyspira intermedia PWS/A] MPINIKEALTFDDVLLVPKESDILPKDVTLRRKLTKKVTLNTPLISSPMDTVTESKMAIAMALCGGLGVIHKNMPLEQQVKEVEIVKSFKDIENKEKATLSEDGSLIAAAAIGISDDRYERIEKLIEAKVDLIVIDTAHGHSKNVLTAIKEIKDKYTQVEVIAGNIATADGAKALIDAGVDAIKIGIGAGSICTTRIIAGVGVPQLTAIHDASEIAKKYNVGAIADGGIKYSGDIVKAFAIGADAVMAGGLFSSTYEAPGDVIIIDGKKYKPYRGMGSVGAMIHGSKDRYFQSEVVNKSKFVPEGIEGVTEYKGHVADVVYQIVGGIRAGMGYIGAKDIQMLQEKAEFIRITNQGLAESHVHDVKITSKAPNY >gi|343387585|ref|AEM23075.1| hypothetical protein, 2808562..2810034 [Brachyspira intermedia PWS/A] MSSNKNYVPKKKSPVIKTLQWLGVSAVSILLIIYFLVVDTRGSQKTPTIGSVNGKPIYYTSTSPYGRAFRQIEGYYQQLGIQINNEMYTYIEDLAFRRAVATILLNDVARKNINVSDNFIVEAMKSQFIDTNGVYNQMAYESFIKNSSQSDKVKIQKDLEEDILAQTASAELFTSVKLNDLEMQREYKRNLTKKDIEMVYINASEIVQSNQVADADLEKYFIDNKTNFAQADISWIITQSGGVADNLYKTLKDDITLFEKTAMEKSFDTNNYKLGYLTRMQMPNEDFANKIFANNATKGTNLLQPIYANGYYYIVLVNDIRIPEKYTDVNREVIRREYLNANMNTLLEAEKTKQAEVLKAAVAGINNLARLNGNGYIKYYKPDKPFSYNQGRLNTAEGAIIPDSSTESFYMHVFSMQTNQVSDVIKLDNGVAVIRLVAEEKPNMATLTTLDAATKNAVKRELSMQRMNLIQIEWENQHIADARVKKHNLR >gi|343387586|ref|AEM23076.1| hypothetical protein, complement(2810117..2810485) [Brachyspira intermedia PWS/A] MKAITTIVLLILSNTFMTIAWYGHLKFSEMKGFAKLSLPIIILISWGIALFEYCFQVPANRIGFQGNGGPFSLMQLKVMQEVITLTIFTIFTVVFFKTETLRINHFIGFLCLILAVFFIFKK >gi|343387587|ref|AEM23077.1| acetyltransferase, RimL family, 2811154..2811708 [Brachyspira intermedia PWS/A] MFYNYEKILETERLILREFEENNEKDYKGLSSILQDKDTMYAYEHAFSNEEVQQWFNNQMNRYKTYGFGLWACILKENNEFIGQCGLTMQNVDKKIHNSYELIEIGYLFNKNYWHKGFATEAAIACKNYAFNVLNADRVYSIIRDNNIASQKVAIRNGMKIIDNTVKHYYNMDMTHYIFCVENI >gi|343387588|ref|AEM23078.1| methyl-accepting chemotaxis protein, complement(2811763..2813505) [Brachyspira intermedia PWS/A] MVVIGLMLYFIPRYKKEFLLEIESNMYKKESSISSWLSYFYSEIDVLSSYCKYETDYTQMLDSFKELKNMKDEIGNIHFSGTVGYKYGGLLIIVYGDNIEGFDQTTREWYIEAVKNPSTPYLSAPYQDAETGETVITISKAVFQNNQLKGVVGLDISFAKIAKSLTADKDNKFFIALDDGRFITHTDANLLFNQQRNIYTELNAPKLNDKDYDVIINKKQKQWTAAYNIPNTPWILVGNGSSLNLSKKIFTLSIIMIIVAIGFLVIQFMLVLLNVNPLSQTLDRAIEVIKNMTNKHFNAVFDERLLNKSDQTGVLVNSIKDMQKSLGDSIHFFQESLNFINNEIDTVSDGTANLSYRSNTQASSLEELSSLIESLSTSLDETNVHSEDARNMSAKVADATKVGVESSSEITSSMNEILESSKKISDMTKLIQSIAFQTNILALNAAVEAARAGEQGKGFAVVASEIRSLAQNVDETAKNITNTINEALAKVEIGNKAVENSSKILSEIEALAEDMLNKLTSISERAVVEADSINQINISVRQLNSITGENSMLAESNASSTKEVREKIENMVERIGSFKF >gi|343387589|ref|AEM23079.1| fused N-acetyl glucosamine specific PTS enzyme: IIC, IIB , and IIA components, complement(2813733..2815850) [Brachyspira intermedia PWS/A] MLPIAVLPVAGLFLGVGSSLTNTTMLETYNLMGILGPGTIAYDILSVLSEAGNIIFGNLPIIFAMSVAIGMAKKEKEVAALSGAIAFFVMHASIGKMITVMGGADKLLAGSTTNVVGILSLQMGVFGGIIVGLGVAALHNKYYTIELPQVLSFFGGTRFVPIISSIVFLVVGILMYYVWPPVQVVMNKLGDLIAGSGYVGTLFYGIIERALIPFGLHHVFYTPLWQTSLGGTMMIDGNLVEGAQNIFFAQLGSPSTTAFSVEATRFMTGKFPFMIFGLPGAALAMYRTSRPEKKQVVGALLFSAALTAMLTGITEPIEFTFIFVAPIFYAIHCVLAGISFMLMHILHVTVGMTFSGGFIDLLLFGIIQGNAKTNWVWIVVVGAAYFFIYYFLFYTLIKKFDWKTPGREPDSEEPKLYRRADVAAAKAAASGEAVDTNPLFQYEEAPLITAGLGGKKNISDVDCCATRLRITVFDPSKVVDATLKASGAAGIIKKGNGIQVIYGPKVTVIKSRLEDYLHDPISDQEPQVPADAPKAEEKKEEKKEEKKVEVKSSSAVYKVYAPIKGNIIKLESVKDEAFSSGAMGKGIAIEPTEGKVYAPYDGVIETAFPTKHAIGLTSDDGVELLIHVGMDTVKLGGAHFISHIEEGQKVKKGDLLLEFDIEKIRGEGYPTLTPVIVTNSDDYTDVIPVAASSINVGDELLEVKK >gi|343387590|ref|AEM23080.1| hypothetical protein, complement(2816188..2817366) [Brachyspira intermedia PWS/A] MIELKGKYNKDCKIFTDNIDEESYSVLYKILNEKASEDVKIRIMPDTHLGKGIVVGFTMPLTDRVNPFHIGVDIGCGMLTSKLSDEIKDIPLEKIDKTIKQNIPMGQSTHKKSFNTLFNFKELNELIRNFIINYNKKFNTKFEVFEIDNEYIEKLCQRVEIDLEKFHNSIGTLGGGNHFIEIGKSSNNEYYITIHSGSRNFGNQVCRYHAKIAKNSEDCYLQDKEMFDYLIDMVIAQYYAKINRETILKIIKDVLNIEIEDSFSSVHNFIDFEDFIIRKGAIRSYENEKMIIPFNMRDGILICEGKSNEDWNCSAPHGAGRVLSRAQAKNQLDMKEFIDSMKGIYSSSVCKNTLDESPMAYKNPNKIEELIEPTVKIVDRLKPVLNIKSTSK >gi|343387591|ref|AEM23081.1| D repair photolyase, 2817580..2818188 [Brachyspira intermedia PWS/A] MLKYREINCKSALNKIDNEYGFCYDLNIYRGCLHKCYYCFAVYSHKYINSKDFFGEIFVKKNIAEVLEKELSSRNWNRDIINLGSVTDNYQEAEKDYKLMRDVLKLLIRYKTPMCISTKSDLILRDFDLIDELSSIVPVRIASTITTLDEKLSSLIEPNVITPQKRFDMLREFKKTKAIVAVHAMPVMPFITEDSIEDIFKK >gi|343387592|ref|AEM23082.1| putative lipopolysaccharide 1,2-glucosyltransferase RfaJ, 2818634..2819185 [Brachyspira intermedia PWS/A] MNKIMNISLISDDKFVTYIATLIVSILKNSSENDKFCFHLIEDGIKDENKNKLLMLKEIKDFEIKFYKPNYKNVEKYKKWQETFKKNGYPIWHYSVFIKLDIPFILKDLDNVLFIDADSIVLNKLNYVFNMDISNHFLICESWYCKGLKNLDPKLYKYILDIGYKNPEYNCVHGAVLLFNIKK >gi|343387593|ref|AEM23083.1| glycosyl transferase family 8, 2819143..2819607 [Brachyspira intermedia PWS/A] MCSWCCIIIQYKKIKEIFTEESYKIKIDECINKYINSIFTEEHIFLYLFKDCIAFSDLKTDYGENTEKIIISGYFISTGKPLKYGFDKEINDYYYKFWEYFSLTPFFKENYFKYMDIFSINRNRIALYKIIDKIVWFIPFRKTRDKIKKILLKI >gi|343387594|ref|AEM23084.1| putative ankyrin repeat-containing protein, complement(2820051..2820761) [Brachyspira intermedia PWS/A] MKKLLLISFVLMITLLISCGKKEENIISNANNIDNKIDTNVVKVQGKYVNMNADFSYGNREEGEYSKDYDIFEAIENHSLKRVIELIEEGEDINQTYGGGKKYSELLNNDYYLDGASPLMFAVFYRDLGIMKYLLDNGADPNIIQDEYGRNVFLLACGFGNVDVIKMIVDFDSDLVDSVSSRDENGLDIAYLYGNIEVFEYLVNTLGLTTDILDHVDEEDPYENTEHIKKLRELLN >gi|343387595|ref|AEM23085.1| putative ankyrin repeat-containing protein, complement(2820995..2821759) [Brachyspira intermedia PWS/A] MKSIKFSKSVLLVSLLSIILIISCGKKEETSVSISNNSVYVSDPNNIYHKTYTNVVKVQGKYVSMNAAFSYGNRKEGEYSEEYDIFEAIQNHSLKRVQELIEEEGEDIDQTYFGDSLYSEFMDDSYAIDGGTPLIFAVFYRDLGIMKYLLDKGADPYIKDDDSWNAFLWACGTGNVDVIKMLVNFDSDLVNSKNMYDANGLHMAALNDNVEVFDYLVKDLGIDINSTDEDGDGVLYYANEDAALEKLRELGAEE >gi|343387596|ref|AEM23086.1| putative ankyrin repeat-containing protein, complement(2821962..2822702) [Brachyspira intermedia PWS/A] MKKLLLISFVLMITFIVSCGKKEEASISNNSVYVSDPNNIYHKTYTNVVKIQGKFVNMNSAFSYDDREEGEYSEDYDIFEAIKNHSLKRVMELIGEGEDIDQTYSGRIKYSEFMDDNYVIGSGTPLIFAIFYRDLGIMKYLLDNGADPHIKDNNGLNSFLWACGVGNVDVIKMLVQADPDLVNSQNMYGDNGLYVAVLNENVEVFEYLVNDLGIDINSTDEDGDGVLYYAEKDEAIEKLKELGAEE >gi|343387597|ref|AEM23087.1| putative ankyrin repeat-containing protein, complement(2822877..2823626) [Brachyspira intermedia PWS/A] MWWYMKKLLLISFVLMITFIVSCGKKEEASISNNSVYVSDPNNIYHKTCTNVVKIQGKFVNMNSSFSYADREEGEYSEEYDIFEAIKNHSLKRVMELIGEGEDIDQNDRDFIMYSEFMDSHYIIEGATPLIFAIFYRDLGIMKYLLDNGADPYIKDDNGKNSFLWACGVGNVEVIKMLVEFYPDLVNSLNVYGSNGLHIAAGSNNVEVFEYLVNDLGIDVNSTNEYGNRVLYYAEKDETIEKLKELGAK >gi|343387598|ref|AEM23088.1| putative F0F1-type ATP synthase, gamma subunit, complement(2823765..2824643) [Brachyspira intermedia PWS/A] MAEKLNVLKARIKAVSSTHKITKTMDMIARSRTAKILTVEQGMRPFTQKLNRIVEDLSHSDMDHVHPLLAPKKKIKNIILFVVTSSRGLCGSYNTKIFDEAMERIRHHHRHGREVQLHVLGKKGEVYFEKQGIPIARKYPRIDEESTFDDCATVVQRFMHEYAVDNASRVEVIYTRYYTRVVHIPKIKSLIPMIPDEEDIEGHKIKKKLEYVIEPNVDDVLKEVVPMAIKTYFYFMLTSSFLSENAERAIAMRNATDNAERLLTDLKNKANRARQEHITNELLDIIGGSEAI >gi|343387599|ref|AEM23089.1| F0F1-type ATP synthase, alpha subunit, complement(2824702..2826201) [Brachyspira intermedia PWS/A] MNIKASEIAAVLKEEIKNYKADFTPNEVGVVVEVGDGIARIIGLPHVMANEMILFESGAVGLAFNLEEETIGAIVLGDYYGIKEGSKVSRLKRILEVPVGDVLLGRVVNPLGVPIDGHGEITTDKRRVIEFPAPGIADRQAVKQPLQTGIKAIDSMTPIGRGQRQLIIGDRGTGKTSIALDAIINQKGTGVICIYVAIGQKASTVAGVVDTLRQHGALEYTIVVAATAADSAPLQYIAPYAGCAMAEYFMYEQKKDTLIIYDDLTKQANAYRQISLLLRRPPGREAFPGDVFYLHSRLLERAAKLSDELGGGSLTALPIIETQDNEVSAYIPTNVISITDGQIYLLTSLFMSGVRPAIDVGISVSRVGGNAQTKAMKKVAGTLRLDLASYRSLEAFSQLGIGLDKATLAQLDRGAKMVELLKQKQYSPIPFEEQVIVIFAATKGFLDNIEVDRVHEFEWRLLQYMRADKQNILDDIREKKDIEDMDGLYKIIEEFKSKF >gi|343387600|ref|AEM23090.1| F0F1-type ATP synthase, delta subunit, complement(2826228..2826869) [Brachyspira intermedia PWS/A] MDSIAENILSDLKKEVLKEVTKEKASRFSRIVKNESSAKNYAKAMFDIASDMGKIEAIKSDLNVVYSSLLVDSDIYDFFKSSFIDGHLRMRILKKIYADKILEETFNLIAILIERDMINILFAIIVEYENLCNEYYNIIVVKITTASNMTDTEDMNKLKDHITNMISDKDIHFTFNIDENIIGGVVIEIEDVVYDYSVRRLLTELKSSISEIN >gi|343387601|ref|AEM23091.1| F0F1-type ATP synthase, delta subunit, complement(2826896..2827444) [Brachyspira intermedia PWS/A] MKESDKLQILKPTANAIFDIARELGMIKEIYNELSECSKLFQDIDIKKYFFDKSISKKDKKELIDKRLKPILSKETYAFVSILTEHDSIDVLPDIASLYKEIADDYSNIVRVRIITASTIDDKTVEDIIQTVKCFSNNEISYETVVDENIIGGIIVYIGSVVYDYSIKKQIDLLQSKFTYGN >gi|343387602|ref|AEM23092.1| putative F0F1-type ATP synthase, subunit B, complement(2827477..2827980) [Brachyspira intermedia PWS/A] MALLKIDPGIIIWTWITFLLVLAILGASTWKIILKGLNARADKIQEDLEEAEKTRENAKKSLAAYREQIDNAKAEASAIIENARVEANRIRDKIINNAREEAELNKNKIMSEIDRSKEEAMNSVKKQALDIAVVMAETILKRNINKEDNQALINEFINNANKENNQK >gi|343387603|ref|AEM23093.1| putative F0F1-type ATP synthase, subunit C, complement(2828016..2828237) [Brachyspira intermedia PWS/A] MELSILGAAIGAGLAAIGVGLGIGFIGSRAVEGIARQPEVSGKIQTAMLIAAALIEGVGLFALVICILALFTK >gi|343387604|ref|AEM23094.1| putative F0F1-type ATP synthase, subunit A, complement(2828274..2829185) [Brachyspira intermedia PWS/A] MIRGLFLLRNVVILTLILSCVFSFNVLYGAENINDYIMEEITDNTAHPFYTIPIKFGKYIDFDFKITKHIILVTLAGILSVCSMKYLAHKLKRPLNRPTYLQSILEGLIDYMNKDVIGATLGEEGKKYVPFCLTVFLFVLFSNILGLIPASIKFPTEDGNHSYLAGGLGANIGFTAAIAVVVFIVYIFAGIRKKGIIKYWTGLVPKGLPLPLIPIIWVLEFITLFNRAFALAIRLFANITGGHIMMIVIPYLIVMSGTLLVSPFAVLFLGFIYVLEMFVAVLQAYIFSLLSAVYIGIAISDEH >gi|343387605|ref|AEM23095.1| anti-sigma factor antagonist, complement(2829545..2829676) [Brachyspira intermedia PWS/A] MEVNIKELENNTVILKLDGDIDVYTSSDLKDSIFSQIEFGAKK >gi|343387606|ref|AEM23096.1| hypothetical protein, 2829976..2830704 [Brachyspira intermedia PWS/A] MPKVNQEYFENKRKIILDAAIKVFFKKPAYSVKMKDIVKESGLSQGGVYKYYSNIDEIVIALINSNKTEVNPRDIIENFYDEPEKAIFELFNAFRKFFFITAKEFGKIMFELQAMFFNSKERMQKLKDNINKDLVLNYWFSELLIFIDKKIDEKYFNPVIDPQDIYMQMIVAASGIGNELILNKYYNLDRKLYYYKGDEEKIEQEEAGRTLDVNLDNLIDTLYKTLLLLLGSKNIHKYSFKN >gi|343387607|ref|AEM23097.1| integral outer membrane protein TolC, efflux pump component, 2830839..2832221 [Brachyspira intermedia PWS/A] MTYAAYMETIRDQIPELKINAVTETNAEMNLLSAESSGDVNLSAQVGAVGKYGSLSSGYSSTTSSPSINATGIQAGIGLGSLIPYTGTKWSVNLTHTSFLGGKLNMPGGQSVDFKNYQPSLTLEVTQPLLRNFFGTLDRYPIKDAEYALTIAKLQRKLDDASVIVSYQKIYYQWIMYEKLLAYYRNMYITAKRFENQMRDRYNNGLIDNDSYQNARTQTMVYSDYYAQNQINLDSLLATVGFFMPVTNIKPDHTTWDAYLDLGSNMQMEAVPFADSVNGQIAYQSKIRAEYTLEAMKNGTLPNLDFVGSVSLNGLSPNSDGYFQSFNSMTNVDFFAGVQFSYPIGNRANKAQYQMAENSLYGIIAQYDQLEKDFNTQLQTYISKFNAYKNLIASKQMQIRAINSRIATQLQKLDQGRLEVDDLLTSRLELVATQTELLNLQYEFITTIFDYRALLAMDYE >gi|343387608|ref|AEM23098.1| acriflavin resistance protein, 2832382..2835576 [Brachyspira intermedia PWS/A] MERIIVFFAKKTMLVNIIVMAVLFVGGYYYFNLRKESIPSTDLDKMLIAVTYPGATPLDVEQNAVIPIEEQLQGISGIDEYETTIIENIAIIIVTLDETLPDRQPVKDEIFRQMQNVPDLSEDVEEVTTYDLNPNKMSIYTLAVHFKEGMEGDERELFDVSQMLENDLVRLEGVGEVRISGRTDPEIKVYVDPVKMQKNYIALSDVVNALSVRNVRATGGDMESGGKEQTVVTYGEFQDPMESSNTVIRSTFNGQRVRISDIGRVESGFEEKTTLMRVNKASGYSLSIVKNENADILKTIDVVNQYLKDNADLIPDNIQVSVMGDNSRTIKSLLSIVTSNLIQGFIIIFITLIIFLDFKSAMFTSLGMVVTMFSCFIYMQVADITFNTMSLAAIITVLGMIVDNSIVVSENIFNFKQAGYKGLEATRLAVSDVVMPMVASTLTTVAAFFPMLTISGMMGKILNLFPKIVIFTLVVSMLQATLLLPNQLQDKEDKYKSYKPKKKSKFKNPLDFDKDALFDKMKIPFGAILEKLIHIRYIVVGAFVALLIASVFLAQNSFKNFVLIYDTSADTIVINIEMPTGTTKEVTTEQIAKIEDAVSRVVKPEELVALYSLVGKQVDQEVVSEEKGSLAGIMVYLVPAAERERTADELVVLINQEIDKTDIRQNVPVFSMNTKGSIDPGDPVDIKIVGNKTELAKQAKEEIKAFLATIPGVIDIDDDDKVGKEELRIMLDYDKIAELGVNVATVANEVRTAYYGTEATYIQELENKLDFRVVFDDEYTYDTKYLENLLIPNTSGRLIYLKNIATIERADGLATLKHYNGQRTITITAGIEYGKNTSQQVMNAVREKYKDFSKQYRGLKLEFGGEAKETVKALKQLAFSFAMAFVFVYIVLLLQLNRFIQPIMIMVIIPFGLIGVLLGFAIHRMPLSFMGVVGIIGLAGVVVNNGIILVDLINKIIDEGVEGGKKGVAKAIVDGAKQRLRPVFLTTVTTVVGLLPTVYGIGGRADIIIPIVMALAYGLLFASLLTLIFLPCMFMIMFDLRLIKIPSTTNPTEEITTTITTAGH >gi|343387609|ref|AEM23099.1| hypothetical protein, 2835785..2836246 [Brachyspira intermedia PWS/A] MAKTIKCKSCKTVNDKYAKQCRSCGTLLYPEISHKKAELITIILDVIFTFIYLFGIYLFIVNCNNNETPKYITILPAPNTLPYFLIILLFAAFAASKILYIVNVFALKKDIIYTIRRFSMFIEAIIMFPLQTILALYFYEPATNQDKMNKKMD >gi|343387610|ref|AEM23100.1| pantoate-beta-alanine ligase, 2836250..2837086 [Brachyspira intermedia PWS/A] MYLTILKNIKSAYKFINDNKDKSIALIPTMGALHEGHAALIKKAKKECDIVIVSIFLNPLQFMKVEDIEKYPQDLDNDKKLLEECQADVLFLPSVEEMIPDDYSIHINIENSKFNIISRPIYYKGIITTVLKLFNIISPTNVYFIEYDYQEVFIIKKIIKDLNYNISLKTIPIVRDENMVALSSLNTLLSDREKEEATIIYKLLKEAREEFKKGGTKSSYLVDIIKNNLKSHKMLKLEYIYIADKETLANVETATKNSIILISCYCGSTRLLDNMPLK >gi|343387611|ref|AEM23101.1| 50S ribosomal protein L13, 2837552..2837878 [Brachyspira intermedia PWS/A] MLKGKHKVDYAYNLDNGDYVIIINAKDIVLTGNKKKGKIHYRHTGYPGGIKAISYGELLEKNPERMVKIAVKGMLSHNPLGRLHLKKLKVYAGSEHPHEANKPTVVNI >gi|343387612|ref|AEM23102.1| 30S ribosomal protein S9, 2837892..2838290 [Brachyspira intermedia PWS/A] MAAKQLTIFTGKRKTANARVRITLGSGKILINGKNYAEYFCNRAALLKVVEDALKVTGNFGKYDVFANVHGGGVSAQADAVRHGIAKALVGESQDFRTTLKRNGFLTRDSRVVERKKYGRSGARKRFQFSKR >gi|343387613|ref|AEM23103.1| DNA-binding transcriptional regulator of transcription, DnaK suppressor protein, 2838335..2838700 [Brachyspira intermedia PWS/A] MTAKKLKKFKDLLLEEKRKTLDELLSGNETYEALKDDSHGDMVDIAFQAYEKQTLMNFSQKEKDKLDMLNNALKRIEDGTYGKCIDCKEEINEERLTALPYTLRCVNCMSKYEDKKRREKM >gi|343387614|ref|AEM23104.1| primosome assembly protein PriA, 2838703..2840688 [Brachyspira intermedia PWS/A] MYVKVVFNLPIDRILTYRKPDEINDSLVGCRVVAPIKGKNNKGIVVEEVETIDGNYKVYPIKARIDLEPICSDKEFKLAKWMSNYYHSSFGEALFAALPVGTPAKKEKKAKPIPAKQKPYLKLNEEQEAVLKKINESIESNNPKTFLLHGVTGSGKTEVYLQAIKKVVDMGKQAIVILPEISLTPQTIKRFAERFEGKIAVLHSKLSPNSKYRYWQMIKKDEIKIVIGARSAIFSPTPNLGIIVIDEEHETSYKAGDTPRYHARQVAFYRKSHENATLLLGSATPSIESFYYASIGKIELLSLKKRAASVNMPEVKILDLKKEKRADAFPMITQKLAEEINRKLEKKEQIILFLNRKGYAPVVTCSYCQRVLECPNCSVSLTYHKKKNVVMCHYCGYTQYLDELCDECKIGHFERIGSGTEKVEEHLNILFPNAVVERMDQDTVGGTKNYEKIFKRFSDGEIDILVGTQMIAKGLDFPNVTLVGVLLADMSLHIPDFRSAERTFNLITQVAGRSGRGEKNGIVYIQTYSPNNYSIECAKNHDYISFYNKEIENRKAPLNYPPFSRLIRLVIRGIDEKKVEDDANKIADMLRMETYNDSDKIIILGATACAMSKLNKYYRWNILIKTPSHSLLKNFFNKLNTSFTADKGNYIEIDIDPINML >gi|343387615|ref|AEM23105.1| two-component response regulator, complement(2840696..2841304) [Brachyspira intermedia PWS/A] MNNTEELIYDDDDMLSPIDAAKIVGVSRTTVNYWVRHYGLKADVTPGKRYKIRYADLKAFLAFNKKEKRIKLKRKQSKYKLAIIEPMEITRKNYLEWLKDDYDVTCISNLVAPLKELKKISPDIILMDINLSDDKDYFYIIDEIKKEISLRTSLIIIITKRYNEDDVVNGLEKGACDYVKKPVGQNELKARIKNAIRFYVDV >gi|343387616|ref|AEM23106.1| mannose-1-phosphate guanylyltransferase, 2841592..2842656 [Brachyspira intermedia PWS/A] MKKSILIMAGGIGERLWPLSRECKPKQFLSIIENKSLIEQTIDRALKITSEDNIFIITGKRYKDAFAKYMPSFKNIIYEPMGRDTAAAIALGAISIKEKIGNAMIAVLPADPIIKNEDLFIKSIENAIEVSENTNEVAVVGIKPNRAETGYGYIKIKDNIKDDVYNVDRFVEKPNYENACKFLEDGNYLWNSGMFIWSIDNILNSIKELMPDTYNKTVQTLEAKDDTQKEEIFKTINKISFDFGIMEKIKNIKCIKSSFFWDDLGAFSALGRIYDKDDNNNVIIGNVYAKEAKSNIIINDDKDTFIAIDGVDDLTIVKSNGVLLIYPNNKDSKIKDILKDIREKDELKDKRNLL >gi|343387617|ref|AEM23107.1| hypothetical protein, complement(2842660..2843505) [Brachyspira intermedia PWS/A] MAICKQKISNTENCPREEYKDGLCILHHNSDDKPEGLFRRIIRDDIYRGFYNFSYMISYDGFNFEGLKIEKNTNMLFTNSSFYGPFQMRNFNLFGSLDFTDSNFESGFFITMSNVYKEIIIKNSKINMDFDMSLSNLQSIDIDNITVECNFSIANSDIIDKLSFNHIHFKNNFSMLNASLQGESSFENIIIDGDADFRNMVFYKSLKFENVEIKGRTIPYEIIDNEKIEFVNVLINGKVIDDNQKERKEKEKKESQLEKIKEAKEKMYKETLLNNKYSKRK >gi|343387618|ref|AEM23108.1| hypothetical protein, complement(2843518..2844513) [Brachyspira intermedia PWS/A] MLKKIFIILFIYSSVFFAADLSSLSSKHSLSVLETSSTRSKGMMGADFLIGNDSSALFKNSSSLMGVLRDSVNLNYTFTSNPQNDYIFNASYAHIGGSYAVGVGFAGDINKVYSYDSLGAKKNDIYNGLYLINVGAAYAINESSFIGANIKSVVNNSGKDNNFGMFFDVSYMQSLFTPNFKLGVGVRNFGFYDNVFAKTDTDITASVAYAKSDGSFAVSGQYTISVPSVSHEFSVGLEAMIIDFNKLGLFKKKTAWYDDLPESILDAPDFVQKRLSQQLPSGILARLGVGTKGVSLGLSIYLDLFRLDYAISFDNFSKDNISHDIGMSFVF >gi|343387619|ref|AEM23109.1| putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, complement(2844595..2845449) [Brachyspira intermedia PWS/A] MPIIKAPCKINISLDITSKRKDGYHLIESLFHTVNLYDIITIEKSDKYNITTSGKYALEDDKEENIVTKIFNHFKNNMNLNNDYNIHIEKNIPTGAGLGGGSSDAANIIKFFLSELNIDINDELIESFSSFGADIPFFIRGGCAWVSGIGEKIRNYDFTLPYNVILIYPNIHVSTKLAYSKFTPEDFNKSDLFYIKNMLDNKDINFERIVSKTYNVFEKNVFNLEKKIEEIKNKIESIIKRKVTMSGSGSSLFALYDNDDVMIEDDFQKLKNELNMDIYKLSLI >gi|343387620|ref|AEM23110.1| hypothetical protein, complement(2845530..2845940) [Brachyspira intermedia PWS/A] MKKILITLIAILFLLVSCLEDLDTVRKQSLFAFYDEMKTEILNDNIDWIEKNSDIENIENIKNIILDNTDSIKKLMSSSNKEYSVTINYTIGDNTNPASGYYIVRNTEFSPTYYYIRLVNNSNKWKIESIDKLPLK >gi|343387621|ref|AEM23111.1| hypothetical protein, complement(2845956..2846441) [Brachyspira intermedia PWS/A] MKNIFIFTIILIVFASSCKKEYGVEYSIYEYEKYISTLIANKDTLEFTSNFIQNLDENIINTLNEMSLIYELTPVNIIESIKNRGALYQRIFSDNDDSLCNYLPKDGGYYDVNVTYKKYKDIMVAQIEYPSFNKISENSIEFVAIYLNDKWNLITINFLNI >gi|343387622|ref|AEM23112.1| putative chemotaxis response regulator, complement(2846438..2847607) [Brachyspira intermedia PWS/A] MLGAIRILIAEDSKTTSALLNNVLANHYRLEVVSIVNNGIDAYKSIVAIKPDFVVMNIDLPLMGGIELLKLLKKENIQTNILIMSSLAQNKDLSSRALDLGALDIIYKPRNINAEFVKDNILNVILETIKNNQIKSDSAFDYNSTILNSCSMKEVIEDEEKTYMDKFDDNVKIMPYDQKQVATALSISFRKDFKAPLLVAIGISTGGPRALRIMLPSIPKDFPLPILISQHIPKEFSSSLISSLQDISSIRIKEAQVDEEILPSIVYVSPGDKNMGIYMDSKGKLRIKFYPDPDKKFVYTPCVDYLFNTIDDVLKDKAIAIVMTGMGNDGTSGMTRLYNHNNLTIAQDKLSCTVYGMPRSVIENKVAHVVLSLYDIAEFLVQYLRGKLK >gi|343387623|ref|AEM23113.1| apolipoprotein N-acyltransferase, complement(2847619..2849835) [Brachyspira intermedia PWS/A] MSFIALVPLNIIIFKADKIRYYVISSSIFVLLFFGTLLMWIVAFMLRELGSLISFLTLFTILFLLIFLFYFPAMLLSGFLSKKNPEFRFIIVPVVFTFMEYMRNIGFLGFPWGIIGYSQWNFPIFIQSADIFGVLGISFFVYFSNSIIAHYLLLYAEKDKIKYKKPYIPALIFISSFVLVIIYGAIKMNVEESRRTFQPKTNIALIQHAFDPNNQWNSIYTGEPFRKGVGGIQGFAEKFLLKSDKFKNEEKPDGSTQNGTIAIKRICSLAKDAALSKPSLIVYPETAAIEGYSFIVNNYKDILDVGVPDYAYPQIYNMYLFYEMIKYTQTYHLVGTVSIKENTNKDAYNQYSYYNSIEFVNDRGNKIDEYSKIKLVPGGESYPFQDNQFLLNTFPFKNIINFMYKQFDSAGANRWERGKKITVFNHPNGYRISGSICYESAFGDFMRKFAYNGAQALAVITEDSWSYSDESLLQHFYMSVFRAIENRRDIVHNGNSGVTGHISSTGKIISTLPFWKPDYMIANVALNDRITIYTRFGEWFVYLCIIAIIVFILSATTKTLFELKEIIKKRFFAKKLETVEEVALPSAKKVDEYIDNDNNHDLPSLDDLDELISKKETKSKITKENIVRENKAGKIAVIEEKKESPYKESDNNKKIVVNKKTNALENVNKNKEDKKLNSDQKIDLFSDNTINNSDKYSIFEEDKYTSAISSALTGIIEENEESLNNKDIKKNSNAIKGD >gi|343387624|ref|AEM23114.1| hemerythrin-related protein, complement(2850031..2850501) [Brachyspira intermedia PWS/A] MEFMMDNNNEQQESTVFIKWVPLYETRHKLIDSQHKELVNIVNELYLATVDNNANTNEAFIKAIKKCIDYTQYHFKTEEKIMDLINYSDAENHKAMHKSFYLEIVDQIRKYEEGQPFVANKFIKFLKDWLLEHIGFQDKKFVNEIKEALKKKEANQ >gi|343387625|ref|AEM23115.1| ATP-dependent protease HslVU (ClpYQ), ATPase subunit, complement(2850569..2851930) [Brachyspira intermedia PWS/A] MSFDAKLESELTPRKIVEALDQYIIGQTEAKRSVAIALRNRYRRRHLPDDLRDEVAPKNIILIGPTGVGKTEIARRLAKLVNAPFIKVEATKYTEVGYVGRDVESMVRDLVNVAIFDLKTAMMKEVEKEATEIALDKLAKLLLPSVKKENDENISEEEAEKKKNAKEQIKKRIQNGDFDESYVEIKISSGNNRMFGIIPGMGFEESDMIQSMVGSIMPTNKKHKRLRVKEAKKYLINEASESLIDMDKITSDALSLTENMGIIFLDEIDKIASGNKTDSADVARHGVQRDLLPIVEGTTVNTRYGPIKTDHILFIAAGAFHINKPSDLIPELQGRFPIRVELKALSKEDFKDILVNPKNAITKQYQELLKTEGVTIEFEEEALSAIADIAYNINTNVENIGARRLYTIMEKVFEEISFSADEHKGEFIKINADNIKESMKDIEDNRDISRYIL >gi|343387626|ref|AEM23116.1| ATP-dependent protease HslVU (ClpYQ), peptidase subunit, complement(2851932..2852462) [Brachyspira intermedia PWS/A] MFKGTTICAVCRDGVTAIAGDGQVTLGETVMKPNAVKLRKLYGGKVISGFAGSTADAFTLFEKFEKRLQEFSGDLTRAAVELAREWRTDKMLRNLQALIIVASKEKMLLLSGNGDVIESENNILAIGSGGQYAKAAAMALSENTDLSAEEIARKSLEIASKICIYTNSNISLEVIK >gi|343387627|ref|AEM23117.1| putative ankyrin repeat-containing protein, complement(2852692..2854716) [Brachyspira intermedia PWS/A] MTFSYSVFALTANETNLFNAINEKNSDNVSNILNNSADIDINVLDDEGYTPLHRAVLNKDLDTVNVLLENENIDINSKLDMKVSIDGWYLGGATPLILASYIGDTNIVSVLLENNADIKAQDDVDGSMAIHMASANGNNDVVMILLDKDPTTINDVDNRGNTPLHWAAMKDKPETVKLLMENGADIESKDADGWTPLHYAAAFSSLQTVQTLVDLGADKMSKTKDGNEPIYYAKGDDVKNYLAGNDNIAREGTPEDNLEGDETVVADNNTADNNTEEAVNNEEETVAEEEVTEENEEYAQNDTAEEEVTGENEEEVVEEQTEEVYVDNTINAVDLDVKQLELLVAVKNNDIIALNTLIKEGVNPNFVDENGYTPLHLAVINSNLDTVEALLKYKDINKEAKLPYKATLDNWYLGGATPLIVASYVGNADIVYTLIEAGCDIKARDDIDGAMPIHVASANGNDDVVILLLEKDKTLVNEADKNGNDTPLHWAAMKNKPSTINVLLKYDADTKIQNSDGNTALHYAAMYASSDVVKNIVASDKSSVNMANNENMYPIHYAALENNTDALVALVQNGKADVNIKDSNNDTALHYAAAYGNMDSVVALVEKCQADKTLKDSDGYTAADLALDNGYNNIANYLRGAAYIPDNNQDNTGNEQELILPEYNKKPNLDKKWW >gi|343387628|ref|AEM23118.1| iron-containing alcohol dehydrogenase, 2854960..2856147 [Brachyspira intermedia PWS/A] MQSFIYNNPTKVIFGKNSEENTAKEIKNFGAKRVFIVYGTKSVKESGLLEKIENIIKKENIEYELFGGVRANPTLSHAREGVKKAIDFKADFILGIGGGSAIDTAKAIAHGAANPETDIWEFWTREKTLEKSLPIGCILTISAAGSETSNSSVLTNEETLDKRGFPTEFNRPKFAIMNPCLTFTLPYYQVACGIVDMLMHTFDRYFGDSENSINGDNNQTTDAIAEAVLRTIFKNGLIAMKDKNNYDAMSELMWCGSLSHNTLTGLGLTFDFIVHKFGHELSAKFDCAHGASLSVMWGSWAKYCLKDKKERFIQYSKNVWNIDDDTGLKGIEKTIEYFKQINMPTNFTELGVGIQSEEVLHDLTRRCIKDGKLEFKHFRALNREDVYNIFKMANV >gi|343387629|ref|AEM23119.1| (3R)-hydroxymyristoyl-(acyl carrier protein) dehydratase, 2856379..2856843 [Brachyspira intermedia PWS/A] MEKININKIMELLPHRYPFLLVDRVESVEEGKIHAIKNVTFNEPQFTGHFPESPIMPGVLMIEALAQTSGIYCYTKILKPDEYGKKFMFFAKIDNVKFKNPVIPGDVMDMFVTVEAFSNNLLKTHGEVKVNDKLACSGDLGLFLVDKEAMKIDK >gi|343387630|ref|AEM23120.1| UDP-N-acetylglucosamine acyltransferase, 2856871..2857665 [Brachyspira intermedia PWS/A] MSNNIHPTAIISDSAKIADTAEIGPYAIIEGEVSIGENTTIGAHSVIKEYTTIGKNNIIHDHAVIGNLPQDIHFDRKTVSFLEIGDGNEIREFANLHRASKENAKTIIKNNCYIMATGHVAHDCEINDNVIICNGALVAGHVRVEKGAFISGNCVVHQFCAIGQYAMISGMSAVGRDILPFALTAHAGEAIIYKLNLVGMRRAGFTSEQISQAEEAYDMWFNWNKTKQEFLDTYLNDTSLNPIARDIVEFISKARRGITPRKTV >gi|343387631|ref|AEM23121.1| putative lipid A disaccharide synthase, 2857681..2858811 [Brachyspira intermedia PWS/A] MRIFIATGEVSGDIQGALLARKIKELDPNIILDGFGGVEMQKANVNILSDMSTLSTIGIFEGANPKVAFKNLGAFNRLKEYLKNNKVDIMLLVDNQGVNLLLAKYCKTNNIPYMYYFPPHVGIWGAWNAKRLLSAKKIITPFLFDYEVYKKYGCDVMYSGHPFADLNYNKNIPELNMPKKEYTVGVLFGSRNQEIKKLAPVFIKSMKMLNDMLSSNIRFVIPIAYPEYKDPIEKILDSHKNLLENVSYSLLCGDDKDYVYSYSDALIMSSGTASLLAACYGKPMVICYKISFITFFLGKLLTNIKYVGMPNVLLNEEAAPELLQNDCNPNAITSHIIKYLTDKEYYKKVSNNLLRVRETLGEKNVLERIAKEIINS >gi|343387632|ref|AEM23122.1| hypothetical protein, 2858808..2859617 [Brachyspira intermedia PWS/A] MIDSKTNIEEISKYIKNHKKEPIKFNITWLDSASKQKINFILEEILKKYNISKYTNDAHYIIMELISNAIKARYLHAITINTLIEKFPDFIEKIKNEEYFDDYYIMSEYSNILKDEETIKQLKEFIKLENKLIKDIDNNIEIDEDKYSKLLLCNSKLTITLIVRFNKNNIEFEIINDAPLTMISRTRIDSKRLTFKEYYKNNLVEKFFMEQLDNTESAGFGLALCDLRLFNQTLEPHNHLKIYDENHKTHSKLILPIKKEFTLVVYNKY >gi|343387633|ref|AEM23123.1| hypothetical protein, complement(2859945..2860727) [Brachyspira intermedia PWS/A] MNKKFLKILLLVVSLSLFAISCSSNNPTNPGGEGTTPPSGSKKATIKIKVKDDLIGGIVSDIESIRFNNQTFTLDSFDQVNKEVTIPDNGDYVYVKLKIGTELKSRNIFTPIENGDTIMDTDETVFIISKTDSMDYYDPNGMGKTISDTIGNFINNYGVIEFKNNTGFININNLVWETDQLLSSTFANGQSFKVFAKPATGKSIGITLENSKGGSTTGELKGPYQVIKGEVTTVELTSETPAKSGAIDSTLYNVYADKLN >gi|343387634|ref|AEM23124.1| putative Smr domain protein, complement(2861503..2862084) [Brachyspira intermedia PWS/A] MSKNSEEEERRLFEFYLEHGHFPDEFNDKKEDIKKEFNKNKIDKENNFNKEIQINSKEELAYTKEDEEMFLSAIENLDCTNHSKKSIHDRKVNTKFKPNIKNAIPKDRLDLHGLTSERALIEIKHFIYECQKNKISPILIIHGKGFGSENRIPVLKNLVEYYLATDGKNYIKYSSDAPINLGGSGAKIIYLDI >gi|343387635|ref|AEM23125.1| transcription termination factor Rho, complement(2862108..2863607) [Brachyspira intermedia PWS/A] MPFPTKKRVKVSNENEEIETAPVQVKKVVRKKVVKQVVAENNEENTNNSEIVLEKDEFDKEIESNDEVKEIKRPHDILYISKLSVLTFEELLEFAESYGIKKDTNNNIRRQELMHAILKAQIALEGKIVAEGTLETLQDGFGFLRSKNSNYLVGPDDIYISPAQIRLFGLRTGDLITGEVRPPKDNAGEKFFALLRIETVNGEEPNNLYKRPHFDKLTPIFPNERIDLEFAPNKISTRIINLVSPIGKGQRGLIVAPPKAGKTMMLQEIANAICKNYPDIKLFILLIDERPEEVTDMKRQVPEAEVIASTFDETPDKHCQVSEMVLEKAKRLVENKHDVVIILDSITRLSRAYNLVVPASGKVLTGGVDSNALHKPKRFFGAARNIEEGGSLTIIASALVDTGSKMDDYIYEEFKGTGNMELHLDRKLANRRLFPAIDIDSSSTRREDLLLTEEEKNKMWALRKYMQSQGIDEDQLIETVVDKMNSTKDNAEFLKLLNS >gi|343387636|ref|AEM23126.1| 50S ribosomal protein L17, complement(2863723..2864109) [Brachyspira intermedia PWS/A] MRHRVTVKKFNRTSAHKKAMLSNMLTSLFKYEKIETTKEKGRAIKQLADKIIYRAKVDNVHNRRTVAKYVKDKTILAKLFKDIAPRYAGKNGGYVRKILSYKRFGDAADMCVIMLCESDSSSAKTENK >gi|343387637|ref|AEM23127.1| DNA-directed RNA polymerase alpha subunit, complement(2864151..2865125) [Brachyspira intermedia PWS/A] MALKEILESIRHPHRVTFEKKDLTPTYGKFIAQPFERGYAVTVGNALRRVLLSSIPGYAITTIKIDGVSNEFENVPGMKEDTIVMIMHLKNVVVSLPSHMDTKTIHMKKEGPCVITAGDLVADDTEAQVHNPDYYIATIAEGYTFEMDIQIEGGYSYVPAEMNIELLEDINAIAIDAIYSPIVSVKYNVDPIRVGQRIDYGKLTLEIETKGNIAPDKALSQAAKILRDNLKHFMDPEEANGDDEKIEETPKDSVLDSLKGKHIEEVEFSVRTANFLMASDLKTLDKVAVKTDADLLRLIGANEMIIEEIKEKLAEYNAHLGMRG >gi|343387638|ref|AEM23128.1| 30S ribosomal protein S4, complement(2865156..2865725) [Brachyspira intermedia PWS/A] MLKGDRCLTAKCAITKKRDVPGPANRKMKQLSEYGIQMREKQKVKRIYGVLEKQFRNYYHEAIRVAGVSGENLLRLLELRLDNVVYRLGLAKSRNQARQFVAHGFISVNGKRMTVPSYCVKVGDKVAFTERGNAVAEVKTIVEGLKSEYVPAWLSLDLSNKTGEIVTLPIREHIEYPINEQLIIEYYSK >gi|343387639|ref|AEM23129.1| 30S ribosomal protein S11, complement(2865825..2866235) [Brachyspira intermedia PWS/A] MATQKGKKTLKDKKIKKDRKVEAFGIVHIKASFNNTIVTITDRNGDTLSWASAGLDGDYKSSKKSTPFAAQVASEKASKKAYEMGVREVEVYVKGPGMGRESSIRAVEASGLKVKLIKDVTPMPHNGCRPRKRRRI >gi|343387640|ref|AEM23130.1| 30S ribosomal protein S13, complement(2866252..2866629) [Brachyspira intermedia PWS/A] MGVEIRNNKRIEIALTDIYGIGRTLAHVICDKANIDYSIKAKDLTDAQITALRDAIEATTKVEGDLRTELYNNIKRLKDIHSYRGMRHIKRLPVHGQRTRTNSRNARGGGARKAIAGKKKAPGKK >gi|343387641|ref|AEM23131.1| translation initiation factor IF-1, complement(2866805..2867023) [Brachyspira intermedia PWS/A] MAERETIEVEGTVVEPLPNATFRVELENGHRILAHISGKMRMNFIRILPGDKVTIEMSPYDLTKGRIIYRYK >gi|343387642|ref|AEM23132.1| preprotein translocase subunit SecY, complement(2867028..2868368) [Brachyspira intermedia PWS/A] MFKSFANIFRVQELRSRILFTVIAILVYRIGSHIPTPGIDPTALLGFLSSSQGGGGLLTIMDLFSGGALFRFSILALGIMPYISASIIMQLLGVVIPALERMQKEGESGRKKINQYVRYLTLVLCIVQSAAMASWIQSINEGAMIFMNPGIGFILLVVVTATAGTMFLMWLGDQITERGLGNGISVIIFAGIVARIPAGVYDVIQKRESEYLNSLVIVLFFIIFAIVIFCVVYEESGQRRIPVQYAKRVVGRKVFGAQSTHIPFKINPSGVIPIIFASALMAIPAQIASLTRGVQWRWLDALLRFFSYGSWAYIILYCLLVIMFAYVYTSVQFNPDDIAENLKKSGGFIPGYRPGTQTAEYLKTVLSRITIGGSIFLAAIAVFPDLMSKIPIFAPFRGTNNSLVYLMGGTSVMISVSVAVELLKQIESYLQMHNYDGILKKSKVRR >gi|343387643|ref|AEM23133.1| 50S ribosomal protein L15, complement(2868380..2868871) [Brachyspira intermedia PWS/A] MAQENTKILRAPKGSSKKRHRVGRGQGSGWGCTAGRGDKGAQSRAGYSRRAGFEGGQMPLHRRIPKSGFTNAAFKKCVNIINVGDLDSIGGNEITRETLLQMGFLSSKRDYIKLLSMGEVKNAVTITVDMASKKAIEKIEKSGGKVVIHERKKYIRKKEDKKS >gi|343387644|ref|AEM23134.1| 50S ribosomal protein L30, complement(2868883..2869062) [Brachyspira intermedia PWS/A] MAKVVITLVKSPIGYEKSQRDTVVALGFKKGKRVVEKEATPQINGMINKISHLLKVEYK >gi|343387645|ref|AEM23135.1| 30S ribosomal protein S5, complement(2869062..2869544) [Brachyspira intermedia PWS/A] MYEERLITLNRVAKVMKGGRRFRFAALMVLGDKNGHVGLGYGKANEVPDAIRKAIEQAKKNMIEVNLKGETIPHNTVGVFRSSRIVMKPASKGTGVISGGPARAVLELAGVKNILSKSLGNNNSMNLAKATFEGLKSLKTVEYMANKRGVSIDQIYGRAE >gi|343387646|ref|AEM23136.1| 50S ribosomal protein L18, complement(2869592..2869948) [Brachyspira intermedia PWS/A] MSLREKIKAQRERRKRSIRIRIEGSSERPRLTVHKSLKYVSAQIIDDSKGITLASASSQEKDLKSGKNVDIAKEIGKVLATRAKEKNISEVVFDRNGYIYHGKIKSLADGAREAGLKF >gi|343387647|ref|AEM23137.1| 50S ribosomal protein L6, complement(2869959..2870531) [Brachyspira intermedia PWS/A] MSRLANKPIAIPQGVEVKIDGHKVIVKGKRGELTREFFDYIIFELENNSLWVKPPKIESTDEKAIKENKAKYSAQLGLVWKLISNMIEGVTNGYKKVLQLEGTGYRSNVQGDTITLQLGFSSDVKMKIPEGIKVTVEKDTKITIEGNDKEQVGELAMNIKKKRPVEPYKGKGVRFDGEHVKYKESKKAAK >gi|343387648|ref|AEM23138.1| 30S ribosomal protein S8, complement(2870556..2870957) [Brachyspira intermedia PWS/A] MSVHDPIADALTIIRNGCRAKKESVTIPFSTKMENILAILKKEGYINDFKKVEVKDKNFFRIEIDLKYYEGSSVIEGIQRVSTPGLRVYTSVDTIPQVKNGFGISVISTSKGVMTDKEARKEKVGGEVLCYVW >gi|343387649|ref|AEM23139.1| ribosomal protein S14, complement(2870974..2871159) [Brachyspira intermedia PWS/A] MARLALKVKATKKQKYKTRQYNRCPICGRPRAYIRQYKMCRICFRDLANKGLIPGVTKSSW >gi|343387650|ref|AEM23140.1| 50S ribosomal protein L5, complement(2871159..2871665) [Brachyspira intermedia PWS/A] MNLSSTMAIPKIEKIIINMGVTQAVTDKKYVDSAVEELSQIAGQRAVVTRAKKSIANFKLRQGMPIGCRVTLRGERMYDFLERLIFIALPRVRDFQGIPRRGFDGNGNYNLGIKEHTIFPEISFDKTDAVKGLNITIVTTADNDDMARTLLERVGLPFRAAPKSQENK >gi|343387651|ref|AEM23141.1| 50S ribosomal protein L24, complement(2871740..2872081) [Brachyspira intermedia PWS/A] MIKKQDLSKTKYKVKKGDTVEVIAGEQSGERGEVLSVDRTRGRVLVKNINMVKKTMPKSQENQKGGIVEKEASIHISNVMVVNKAGKATRVGRKEVDGKLKRYAKKSGEVLDK >gi|343387652|ref|AEM23142.1| 50S ribosomal protein L14, complement(2872084..2872452) [Brachyspira intermedia PWS/A] MIQVPSTLNVADNTGVKKLKCIKVLGGSRRRYATLGDVIICSVTDIIPTCSIEKGKVVKAVIVRVKKEVRRPDGSYIRFDENAAVIVDDKREPRGKRIFGPVARELRDRGFMKIVSLAPEVI >gi|343387653|ref|AEM23143.1| 30S ribosomal protein S17, complement(2872458..2872820) [Brachyspira intermedia PWS/A] MESKAKKYKRVLEGIVVSDKMDKTIVVKVESKQKHPLYGKTISKNKRYKAHDEKNECHEGDLVRVIECRPLSKDKKFRLTKIIKKAERIEKDSIDSDVENVLKREKHAPEAAVSSQVEGE >gi|343387654|ref|AEM23144.1| 50S ribosomal protein L29, complement(2872833..2873039) [Brachyspira intermedia PWS/A] MAKNTKDYKSLGLEELKGELLKLEKEYQEHRFEKVVGDARQTHQLKKARKDIARVKTFIRQHELGIKK >gi|343387655|ref|AEM23145.1| 50S ribosomal protein L16, complement(2873039..2873434) [Brachyspira intermedia PWS/A] MKYRKHHRGRMKGKSKRGSNLTFGDYGLMALEPVWLTDRQIEAARIAISRHVKRVGKMWIKVFPDKPYTKKPAETRMGKGKGNVEYWVAVVKPGKVIFEIAGVPEELAQSAFRLAGFKLPIKTKFIKREAI >gi|343387656|ref|AEM23146.1| ribosomal protein S3, complement(2873452..2874189) [Brachyspira intermedia PWS/A] MGQKVSPIGLRLGINKTWSSKWFEDSRTYADSLHEDLSIRRYIMNYYYKTLKEEQKKIGGKKESFDPAISDIQIVRFPDRINIFISTARAGVVIGPKGQRVETVKTTVQKMVKKPVHFSITEIRDAELDANLAAQSVARQLEMRVAFRRAMKSVITQAMKKGAKGIKVMCSGRLAGADIARTEQYKNGSVPLHTLRANIDYGTAEALTTFGIIGIKVWIYKGEILDKKEHKQDDAGKVISAKGDR >gi|343387657|ref|AEM23147.1| 50S ribosomal protein L22, complement(2874193..2874600) [Brachyspira intermedia PWS/A] MDYKVKVRYLRIGRRKVARLLPFVKGEYVNHAISNLATMPQMSSVVLRKAIKSGIANAIFQSRNINPDTLWVKTAYVDKAPTLKRIRAASRGSADPILKRLSHITIILSDDKKPEKKKLKAKSAKTEEAPKAAEV >gi|343387658|ref|AEM23148.1| 30S ribosomal protein S19, complement(2874612..2874761) [Brachyspira intermedia PWS/A] MIGFTINVHNGKTFVAVYIQENMIGHKLGEFAPTRKFISHAGAAKVGKK >gi|343387659|ref|AEM23149.1| 50S ribosomal protein L2, complement(2874881..2875717) [Brachyspira intermedia PWS/A] MAIKKFKPTTPSLRYRTVVDFSDITTNEPCKSLVCGKKRISGRGSNGRITMRRRGGGHKKLFRFVDFRRDKHDVEAKVVSIEYDPNRTARIALLHYTDGEKRYIIWPLGLNVGDRVVSGENAKVKIGCSLPLKKIPLGTIIHNIEITPGKGGQLVRAAGGGAQITAKSGGYCVIRLRSGEERRILENCYATIGQIGNLDHFNTTDGKAGTTRHKGRRPKVRGVVMNPVDHPHGGGEGKSGQGNPHPVSPTGVPTKGYKTRKKHKYSDRLIIKRRGGKK >gi|343387660|ref|AEM23150.1| 50S ribosomal protein L23, complement(2875730..2876023) [Brachyspira intermedia PWS/A] MYSLLIEPILTEKSNMLRTEPRGTEKRYYVFKVRQDANKTELKKAVEKIFNVHPLDCKIINVKPKKKNRRMSRRGYTRSYKKAIIVLDGKESIDIVK >gi|343387661|ref|AEM23151.1| 50S ribosomal protein L4, complement(2876035..2876682) [Brachyspira intermedia PWS/A] MEVVILNENGDSVGNLEIVDEIFKSEVNNNLLYEAIKNELANRRQGTHSTKTRAEVSGGGKKPWRQKGTGRARAGSTRSPIWVGGGKTHTPKPRDYSYRLPKKMKRKALLSVLSLKYGSNVLKVFEDFTFDAPKTKRMASFISKVKEPNTRKVAFVVGKDESLGDNYNKLLLSLRNIKDLKLVNADSMSIHPLFYADEVYFTKTALSKLNARIKG >gi|343387662|ref|AEM23152.1| 50S ribosomal protein L3, complement(2876711..2877364) [Brachyspira intermedia PWS/A] MVGIIGKKLGMTTVFDETGNAIAVTVVEAGPCTVMQIRDNEKDGYSAIQLGYGAVKEKHLKKPQIGQFKKANLEPKKYLKEFRMDDASSYTVGQELKADIFQAGDFIDVSSLSKGRGFAGVMKRHNYDGGPMSHGSNFRRRAGSIGCNSYPARVWKGKGMPGHMGNTLTTIQNLKVVEIRPDDNLIMIKGAIPGAINSIVKLTSAVKKRNKKKNSMN >gi|343387663|ref|AEM23153.1| 30S ribosomal protein S10, complement(2877469..2877774) [Brachyspira intermedia PWS/A] MKEQKIRVKLKAFDIELIDQSAQSIVASVKKTGARVSGPIPLPTSIRKVTVIRSPHVNIKSREQFEMRIYKRLIDIFDVTPQTTESLKKLALPAGVDVQLK >gi|343387664|ref|AEM23154.1| elongation factor Tu, complement(2877855..2879081) [Brachyspira intermedia PWS/A] MAKGTYEGNKTHVNVGTIGHVDHGKTTLTSAITAVSSAMFPATVQKVAYDSVAKASESQGRRDPTKILTIATSHVEYESDNRHYAHVDCPGHADYIKNMITGAAQMDGAILVVSAEDGVMPQTKEHVLLSRQVGVNYIVVFLNKCDKLDDPEMAEIVEAEVIDVLDHYGFDGSKTPIIRGSAIKAIQAIEAGKDPRTDPDCKCILDLLNALDTYIPDPVREVDKDFLMSIEDVYSIPGRGTVVTGRIERGKIEKGNEVEIVGIRPTQKTTCTGVEMFKKEVVGIAGYNVGCLLRGIERKAVERGQVLAKPGTITPHKKFEAEVYILKKEEGGRHSGFVSGYRPQMYFRTTDVTGVINLAEGAQMIMPGDNANLTIELITPIAMEEKQRFAIREGGKTVGNGVVTKILE >gi|343387665|ref|AEM23155.1| elongation factor G, complement(2879157..2881193) [Brachyspira intermedia PWS/A] MAHIDAGKTTLSERILFFTGKTHRLGEVHEGAAEMDWMEQERERGITITSAATTCFWNGHRINLIDTPGHVDFTAEVERSLRVLDSAVGVFCSVGGVQPQSETVWRQASNYKIPRAIFVNKMDRIGANFYAVLDQTRDRLKANSHPVVIPIGAESNFEGVVDLVNMKEIIWVSEDGMKMEEREIRPELKEKAEEYRNSLLEAIVEYDDDAMNKFFEGEEIDVPTIKRLIRTATLTADFFPMFCGTAFKNKGIQVLINGIVDYLPSPIDKPEVEGTDLDGNVIKRKIADDEKFSALAFKIMTDPHVGKIAFLRVYSGILESGSYVLNATKGKRERIGRILQMHANKREEIEQVYAGDIAAAVGLKETTTGDTLCPENAPIILESINFPEPVINVAIEPKTKGDRDKMSVALSRLAEEDPTFRVSFDEETGQTIIAGMGELHLEIICDRMKREYKVEANVGRPQVSYREGIKKTVEVQGKFVRQSGGKGQYGDVWLRIGPNEPNGGFKFNNEIVGGAVPREYIPAVEKGCVESMNTGVLANYPMLDVIVSAFDGSFHPVDSSEMAFKIAASMGFKDGCKKADPYLLEPMMTVEVVTPEDYMGDIIGDLASRRGQVHGFTDKSGYKSINATVPLAEMFGYTTSIRNVSQGRASYTMQFSHYEEVPKNVAEEIIGARMGNNK >gi|343387666|ref|AEM23156.1| 30S ribosomal protein S7, complement(2881258..2881728) [Brachyspira intermedia PWS/A] MARRRRAQTRKIDADPVYGSVVISKFINKLMYDGKKSKAENIFYKAMDLVKEKTGKDGLEAFNEAIENIKPRVEVKSRRVGGSTYQVPVDVRPDRQNSLAFTWLIDASRKRGGRSMIERLSNEIVDAIDGKGQAVAKRDTVHRMAEGNKAFAHFRW >gi|343387667|ref|AEM23157.1| 30S ribosomal protein S12, complement(2881743..2882045) [Brachyspira intermedia PWS/A] MKCPQREGVCTRVTTTTPKKPNSAMRKIARVRVTNGMEVTAYIPGIDHTLQEHNRVLIRGGRVKDLPGCRYHIVRGSREATGVEKRMKARSKYGTKKPKA >gi|343387668|ref|AEM23158.1| bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein, 2882659..2883339 [Brachyspira intermedia PWS/A] MNNINQNEISKLKFDDKGLIPAIVIDYYTKEVLTLAYMNKESLEISIKEEKTCFYSRSRQELWRKGETSGNYQHIQSIKSDCDNDALVIEVIKDGPACHTGSESCFFNEVYSKEDYKDFSIDKLYELIRGRKINQTEGSYTTYLFNSGIDKILKKVGEECTEVIIGAKNDSNKETIYELSDLLYHSLVLMVEKGITINDIKNELANRSIIDKKENKKHEIIQNSNT >gi|343387669|ref|AEM23159.1| hypothetical protein, 2883722..2884231 [Brachyspira intermedia PWS/A] MSIILIISCTKDYGVKVTKPGADLILSKMQSGNWAGASANGDKLSINTGNNAGDYTFDSPVLGIGGIYKDSNGKYIMTAPAGSELYVVEMDENAKKAVDTILDVLDDKGGEAVVGNLISSIMDKGAENIDLSNSDEILKGTNLSADKKAEIENILKNSQGGFKNGEAIK >gi|343387670|ref|AEM23160.1| hypothetical protein, 2884253..2885161 [Brachyspira intermedia PWS/A] MKKIFILLSVLFCLSAYASAKGLPLSTEVTGEDYSWIKGRQMISVNLNPGGAVFYPLLFNTAVNNAVNLTGLIGMDLGDINKYFDYADAKGSAWYIPAISYSLFVHNQIALETGIGVYSSTYDLTITKENAGKLLEALGQGNYAGVVGKDTTFNASFIFMPVTFGVKFYGPKRQFYNAFRFGIDAFFYTVTTDNGLTGIRTDHTVHDAALYVSYELGWNIELFPTKEWRVKPTIDIAILEIGYYVRPWTQNVYNTVTGGVTSLTAGFSAFNIPAWSSFPDWAKYLANIRFALFPRIGFSLRF >gi|343387671|ref|AEM23161.1| hypothetical protein, 2885174..2885884 [Brachyspira intermedia PWS/A] MNIKKIIIFISVLIFTSVNIVNAQDYLKHSLGIDFGTTLFSMGTMPLITELIFKTKEGASGKFYDGKFGIRLTYNYTYLPKQSIDATLGFYAFDTHYGDYADPIKDSAGNIINSGTISKFYNGSTIAIPASIGVRFYFNKNDTPSGFFLLPKVGMTTFIVNGKELRDDGSTRYKTTTVYDFYISGEMGFRIDLFSQMGANWEVRPFIDISLLDIGYSFTPGIRLIPLPRLAVGISF >gi|343387672|ref|AEM23162.1| OmpA family protein, 2885917..2886582 [Brachyspira intermedia PWS/A] MKKILLISIITCFMSSSLFPIIDAFYIAPKIIYNFNDSGYKNNKNQNIMNNYLGAGFSTGFDFYRYQRNIPLRLELEYTFKDGMTGNYHTGNIVKQSQHSILAAAYYSMHIYHIKKSELRTVTAEEIYSRTPIMSLYLGLLMGTKINANTYDRWFEENGRVKATVTVPSPTFAIGGAVGVDIYVTSFLNLDIGYRILYGLDSVLSHEFAIAARFPIPDLRK >gi|343387673|ref|AEM23163.1| hypothetical protein, 2886588..2886845 [Brachyspira intermedia PWS/A] MKKIALLLLILIALASCQTSTMIIMPVQNVQMPAYPPQSYLGEKSKLNSNSYYNLNNSLGMNSSLFNNSIFNTNNLLRKNFVYLK >gi|343387674|ref|AEM23164.1| tia invasion determinant, 2886870..2887496 [Brachyspira intermedia PWS/A] MIILLFFIVAFSSKSLSAAIFSGVYIAPKINFKHEALNKTNKLELGKLPFLEKNNYVGGGFAVGYDLFRKTRLVPLRLDIEYMFQGVIGKKETWMQSIMASVYYDINIFFVRNNELDNLTTRALYSRVPNMSIYFGLSFGNRLYQMHHEYSDIGKALITRSSFAFGINAGLVYNILDWFALDLGYRYLLGFGFHDAHEVLLGARFTIR >gi|343387675|ref|AEM23165.1| putative peptidoglycan-associated outer membrane lipoprotein, 2887628..2888260 [Brachyspira intermedia PWS/A] MHAVLYNDNSQATKTASKTYTQKNDITIVADSIKEQEEYTNNEEQQIIEEKTEEKELTNNDVIEKEKPQIIKQTEVIKQDDNEILVTANIIAFDFDSYELKNEYDEGIDEICKYLNKNQNINLIIEGHSDSSGDSNYNIYLSENRAKAIFDKLVDKGVDKDRLRYIGYGSTHSSEYNDKDRKCQFVIINNSNEEKEYKKENETDIIKLKR >gi|343387676|ref|AEM23166.1| lipoprotein, complement(2889121..2891385) [Brachyspira intermedia PWS/A] MKYKPQTKEELKELVKDESIYLGDIDTSLINDMTVLFKESKRKKFDGIENWDTSNVIDMHDMFFNCRTFNSDISKWNVSNVENMACMFFGAEEFNQYIGDWNVYKVKDMNSIFFDCKKFNQDLNSWNVSNVENMSFMFYGASSFNQPLNNWNVSNVKNMYGMFSGCKKFNQDLNSWNTSNAENMSCMFFEAENFDQSISNWNVINVTKMYSMFERCKNFNQSLNDWNVSNVTDMNSMFKCAEKINQLLNNWDTSKVENMRSMFEEAYRFNSDINNWNTSNVKDMSNMFCKCKSFNKPLYKWDTSNVVNMKCMFFEAENFNQDINNWNVSKTENMLGMFENAYNFNQPLNNWDTSNVLYMNYMFFNAKSFNQDIGSWNVFSAIYMSYMFSGAESFNYSIENWIINEACFIDDIFSGASSFKNVKSILNIYFLSKGNNRKKLLDMLENCNIKEVYKEVLKYNKLKDFIKKLENTYYDELKELIENKESIITEYKKAKKIELKDNEKYKPKNKIELLKLIKEKVKYDKIDTSLITDMSGLFQNSKLEKFDGIETWDTSNVEDMHNMFKGAVYFNHNIENWNVSKVEDMAYMFEGCTRFNQPLNNWNVSNVKYMNFMFSHCIIFNNDLSNWNVSNVEIMSFMFESAYSFNQDISKWNISKLKYADAMFRYAKSFNQPLNDWNMSNAESITSMFQWASNFNQPLYKWNMSNIKYISFLFDNCINFNQDLESWKLGENVNMKYAFSNSPIESNPPSWYKS >gi|343387677|ref|AEM23167.1| hypothetical protein, 2891745..2893052 [Brachyspira intermedia PWS/A] MINGDNMQKIIIKNLLIVKNFEMEIDKFNLIIGEQSSGKSTISKAIFFFKEINAQIKFYIFVYKNNIQSSIKKIYNNIIKDSFITIFGKLENIDDDLYLKYIYKSNTSIEITKKNNDLDINYSENIIGFFHKLEIDIKKLFEEYLNFNSPIRFEDIFERGIGREIDDFFENESMTYYIPASRSSIALLNNQRTRLDYDTIDFIFYPFITLVEKIEFLFKDGVQNFIKNINDDYKKTILNKMNKKIEKYMGGEYFCDDKFGYIKLENNKKIPVDKISSGQQEILWLLNVLLGITWLNKKNQFVIIEEPEAHLYPKMQKEIIDFIVNFMNMTNSSILITTHSPYILTSTNNLLYAGKLKENYKNNKEKIEKINNIVGEYGAINPSEINAFKLYLNDFRYTNIINEESEINCEEIDDVSNTINETYTKLFDMELNNEQ >gi|343387678|ref|AEM23168.1| hypothetical protein, 2893042..2893551 [Brachyspira intermedia PWS/A] MNNNYELLKKDDRKTLSDAQTKLYIKAENDILIIKVDNGIFNDNVKKCDYLAYREKEVSNFIELKGSKIDKAYIQIIETIKNISNNDKLKHLIDIKELKAYIVSKEKNKIPQGIENKSKELAKILFTKSKIKPQDMFQLINYVLVVSDKDKRQSNGNRIICSYKNPIIL >gi|343387679|ref|AEM23169.1| argininosuccinate lyase, complement(2893943..2895331) [Brachyspira intermedia PWS/A] MKEKLWGGRFSKELNKEANDFNSSLSFDCKMYKEDILGSIAHAKMLGECSIIPLDESVTIINGLKQILDDIENNKLQFDFELEDIHTQVERWLIDRVGEVGKKVHTGRSRNDQVALDLRMHLKNKVENIKSLILDLISTLVSIQKEHTKTYMSGYTHLQRAQVITFAHYLGAYVEMFKRDFDRLTDAYKRIDVMPLGAGALACSTYKIDNKKTAETLNFKNVMLNSLDAVSDRDFVIEVESALSIIMMHLSRFSEEMILYSTSEFKFVEFDDEFTTGSSLMPQKKNPDILELIRGKTGRVYGNLFSILTVMKSLPLAYNKDMQEDKEGIFDSLENVKNCLSILPNVLKTMKVNKDNMLNSVNEGFLNATEVADYLVRKGMPFRDAHGVSGRLVVYSINNNKNLSTLSIEEYKKESDLFEDDIYACITPEAQVSNKTMIGSPSESAVLEVIKINEDWLKSNGK >gi|343387680|ref|AEM23170.1| argininosuccinate lyase, complement(2895338..2896522) [Brachyspira intermedia PWS/A] MDTTVIIPWLKENYDYDVIAVCVDVGQGTETDGLEERALKTGAVKYRLVKCEDEFVTDYIYPIVKAEATYEDKYLLGTSAARPLIAKKLVEVALEEGATAIAHGATGKGNDQVRFELTVKALAPNFEIIAPWREWNISSREEEIKYLEDRNIEVPMKKDDSYSRDKNLWHLSHEGLELEDPANMPNYERLLKLSNTIENAPNEGQFVELEFEKGIPTKVDGKTFSPSDLVKYLNEIGGKHAVGIVDLLENRVVGIKCRGVYETPGGTILYAAHREIEHLCLDRETLYFKHVVSHKLTDLVYSGRWFTPLREALCAFIDSTQQTVTGKVKLKLYKGNVIPAGVTSPYSLYNQSLASFTTGELYDHHDAQGFITLFGLPLKVNALMKEQAKKMGLK >gi|343387681|ref|AEM23171.1| ornithine carbamoyltransferase, complement(2896854..2897795) [Brachyspira intermedia PWS/A] MKKVNLSGRHFINLEDFTSEELSALIDYTFELKSKVRNREEIDIMKNRTMVMYFSKPSLRTRLSFEIGMKKLGGDAFVLKQDEIILGQRESIEDSSNVISRYCDLIMIRTFAHSDVEDFAKYSKVPVINALTDLSHPCQIMADLFTMKEHFGKLKGLTLTYIGDGNNVCNSLLTGCTSLGVNIKVGVPKGYEPDAKTIEVAKNIAKNTGCTVDILNDVKEAVSGADVVYTDVWASMGQESEKEKRLNVFKGFTLTKELFALANKGAIALHCLPAHKGEEISEEVFNMNSQYIYEEAENRMHAQMAIMSSIVKE >gi|343387682|ref|AEM23172.1| hypothetical protein, complement(2897962..2898480) [Brachyspira intermedia PWS/A] MVFMFNLYEELTKIEILLSKEIEVYKVILEDEEKKVNSIINTRLQDIHLYCDHQNEKMTEANELRKMRENVIDLIVLNKFPHLSETATLSDIIRRIPLNKTARISALRLELVTLMARLKHLNKLAPKLFDEALDLFANMKEVLNESKKVGYNNKGKEHVVNRKLSVLVNKQV >gi|343387683|ref|AEM23173.1| hypothetical protein, complement(2898577..2899872) [Brachyspira intermedia PWS/A] MNVEFLLSATFDNRRVIPNQDRLFKAIVSSLNEVNINPLVMISEFSIIEDGSTLIYSFHPSADPIYFEFKTDTLYITITTGSFGAGYHRFIVGVLDRIARRLDIEFKEDLVHKDPSGYFRSRDFEALKKFFVNSLADYAKMLITHHDNGFSNFMISMPYNYPVIEKEYFALSSLGYWGKNWFTDFIDASEEDRLTLAADFFLWDIEEMNAKFWFKSFISMIWLYFPFREAIDNKEKTMYKKIMYAFQESYKKDASLKYPWDILIDIAHYLDDENLAKFIESKKTAHHQDTLQIGFRLEKARFSIAAGFTIILPMRMNVFRNDKSLIEFKDINVYIAMQVYSFANEEIDVIMEYVLKQIDIAGEDKGEKLDVKSQSGKIESIVYEKELEDNDHIITVACAAKKLALLAWFTYSDPEYRDMCIEAIKSIDVEN >gi|343387684|ref|AEM23174.1| hypothetical protein, 2900395..2901372 [Brachyspira intermedia PWS/A] MTVIVSSISAVGIIYINNTKDIMSSSDLKQIQLEEEKKRIRKDIIIRPGAIETIALHLAYSNRISPPTIKNRELGFYLDGIWFNWANGKLLTDEDMTNQDNYIPFGFYPYTIDGLPEVQKETPERTKELQEYYKKRVNNTKYINNKFLDTLYDGTSERSMIKHISTKSILGYKVRVHDYVYEQLSNVSVEVKLIAQTNQEVENFLDSLKIVSGYVWKIISKSASRSYHSYGVAFDTLPKKNNGKQIYWAWTRVNNKAWYAVPYDKRWHPPKEVVEVFEKYGFIWGGKWHNYDTIHFEYRPELIIYNKIKNDEDATYELVEKYGIF >gi|343387685|ref|AEM23175.1| hypothetical protein, 2901395..2903089 [Brachyspira intermedia PWS/A] MDNTIFTKNIELLNKNKYNFRAVKKLIEYNAANNKYQLKQAKNDLFAVMYNNKPLTSLYNPMEEAKRLISQFITNNNEHIGIFLSIASFFHIEYFLSLNENNKAIIIEKDIEIVKLILENLKPSNENILKNTILILNEDLENILAFFNFYMNDNDSKKIVYIRHIRASNIDDETREYYDNVNISLANSIKEKLMSLTSNYYFAPIWARNTLYNMHFNEGYSIKTFYNILKRETPVLLVSAGASADDYIENIKELSNTHFVIVLSHAFNSLIKNNIKPDAVVSTDGGFYSSIHLKELLKKENENINIFTTHTAYPFPLTHIENKRIFYFSHDESFEKILYPINDDDNNNIYFYMEGSVIMPALRIAYMLNPKYILLAGCDFCHIDDKTHSKYSNASAHDYINSSKLKTFESAKYKRLNDNQKIKCYDNVYRNTSSSLLSYKNHFESLIGEISETTDIFTLTVQSASIKNVKIYNSNNLDNNKNIEIKNYLKENIDKEKLVKEIDNFINNINKENINKEDFNNNMKNIADIISPWHVEKFEKSVISYEELKSYMNKWYNDIKLLIY >gi|343387686|ref|AEM23176.1| hypothetical protein, 2903311..2903850 [Brachyspira intermedia PWS/A] MKKIVFVFITLLTISIQAFSAAVTTHYNNWKIRRISYNNTDTKTVTMTIKNNNSLEVYIAARNNQVSVSINWYKDKVDENTPVVEYSFNNSPYKSVEPFMRSSSDNFDILYTISPAFGIIQEKEVIDFLNKLINSKTLSIRANSNSEAYTIDVTGLKEAMHKTDFSGTLLEKYKSQILK >gi|343387687|ref|AEM23177.1| conserved hypothetical protein, complement(2904441..2905073) [Brachyspira intermedia PWS/A] MTVQEEYFQKLSSVLKDKFNKKGFAFDSFSNKEEAKKFVLSLIKENDTITFGGSTSVNQMGILEDLKNYKNFVDRNNKELKAEAEVKAFSSDVYLCSANAITKNGDIVSTDGGGNRVAATIYGPKKVFLIVGRNKVCDTVEDAIKRVRSIAAGENSVRFKVDNPCCVGNMVCDEENCDIEKRLCSYTIIVNKCHIKDRIHIIFIDEELGF >gi|343387688|ref|AEM23178.1| Flagellar filament core protein flaB2, complement(2905541..2906320) [Brachyspira intermedia PWS/A] MAALSSGMRINRAGDDASGLAVSEKMRTQIRGLRQAERNTQDGISFIQTTEGYLQESQDILQRIRELAVQSANGIYTDADRMLIQVEVSQLVDEVNRIASQAQFNTLNMLTGRFANPNEGGAPVASMWFHMGANMDERRRVYIGTMTAAALGLQTAEGTGISISSIDKANSAIGLVDEALMKVSKQRSNLGAYQNRLELTAQGLMIAYENTAASESRIRDTDMAETSVKFAKDQILSQANLAMLAQANTMNQGALRLVQ >gi|343387689|ref|AEM23179.1| hypothetical protein, 2907533..2907817 [Brachyspira intermedia PWS/A] MLEKVKDFYRTKKILFFIILFVWLLLVVVSGVLIGSCSRPKVIPLTPEEENSKAINILKEDEEKILKGEMLSTKENLSFEDLEHSRNFVESRKK >gi|343387690|ref|AEM23180.1| hypothetical protein, 2907840..2909138 [Brachyspira intermedia PWS/A] MRVFLCSSVMAMFIIINAAFAQETITVQPDDKVVTNTSSARVKSGPIEDDLIKSVDLAENTLFSIKLNATNFDRYIRITSYSTNLDFVRFTRDKTNAFLTFRTLTAGIGKLDFQVDNEESIIRKYFYTITVTNSQGIASMETNAILDPDNETNNMSTNEMMTNDVMTNDMMDTNNTATNMVNTNEVVPNDANQTNQTASTNNAQTSIIKKPADKPAKVTETNPEIIALFNSAEELKNIKDYDNAVNAYSNIISSYPNSKYSVYSHFRIGDIYNQKKDYNNAFDMYNEASKLKNAGNNEKAAAIYSMGVMKKSENKHDEAIVYFNDIMNNYSQTPLYGNAVYEIADSLKQLGRISDGADMLEKSLEKNVKFSKRGDSILLLAEIYEKGDNNIRNFEKAYKTYNLYLAEYPTSSKAKYANDRKNFLSRNAVHLQ >gi|343387691|ref|AEM23181.1| hypothetical protein, 2909307..2911283 [Brachyspira intermedia PWS/A] MPRYEQLKSKSKSISYTRQIRNESKEINLKKPIIISATFIIAAALIFTVVKKYSPMVDIAIKDFFSINHREALVLESDGITEDQNKMSFLNNIPLFNFFIKTDTNETLSVMAYETNSKIETSLDMMSENITNSSIITKESLLPFFNNSGVSNSILYDSGYIDYGNNHESVILSNNMNTLNRIPENDIINDNEENIIVADIENTPNTEEEKTYNYLEQMILENRQNNNTQDIKTTNTITNKQNNTESKKSIFDDILKPKDNTTKRETTTMKPASTTTFSTRPPASYVENTTKKDNANNDLNIDKYLNNNDDKEKVINNNQVNNNTVNNDRNINNNRKDNLNNNRKENIANNNRNLNNNEVNNNNVTENRKDIMQKSVYTITNSFDKSNIDYNRVINDMVNPNNNVVRENNNNIVNDSKVNNSKVNNNIISKDNNSIINKPSEEKNNINENKENNIIKNNELKDNNIKETDNNIIKNNSIKNNNAEYKKEIIKKAQSDINNYNIKKANNNITRDLKERKLKENSNEGIYLVEYSESTGSITLIFRERKFNNKSSVEEAIKELLVGATDEENNRNIISCIPKDTELLDIFIENNTVYLNFNENFEFNPLGNEGTMVQIYQFVYTATQFEGIDNVIFLINGQLNETIGAEGAIENMPFSRFE >gi|343387692|ref|AEM23182.1| Rhodanese-like protein, 2911387..2911704 [Brachyspira intermedia PWS/A] MLKSLNVQEAADLIKSNNDIKLLDVRSKMEVNMTGAIEGSILIDLNDPKAENLVNGLDKSEKYLLYCATGARSEALAHYMDRNGFKEIYYLIYAGHSQLAMALKK >gi|343387693|ref|AEM23183.1| extracellular solute-binding protein, family 5, complement(2911828..2913417) [Brachyspira intermedia PWS/A] MRKIIFLLITVFLFLLSCGNDKSYVETIRVTIGAEPQSIDPSFLSAIDSMIYAVHVFEGLTSKDENGNIIGGVAERWDISEDGLSITFHLRDNAKWSDGKNVVADEFVYSFRRLADPNTASAYSFLITPIKNADKILKGELATEKLGVEALDDRTLKVYFESPTAYFLELAAIPIFSPLRKEFISDNWTFSPKTYIGNGPYRMIDRKPDQIISLELNTNYWNKDMMIAKRIDFVMFSDVSTAYAALKEGSILYSYKVPTADIDLLRKEGYLVTTPSLGTAYYALNNTNEVLKDKRVRRALALAIDRNYIVENITKGGEIPAAAFIPYGLKDIKGDFRENGGGYYSVKKEDYKANIEEAKKLLEEAGYTNGANFPVLEFKTNPGVGITIAEAVQQMWKENLNIDMTITQEEWSVFQKNRQTRNYVVCRADWIGDYLDPMTFADLFVSTSAGNRVGYNDPEYDRLILEAKNTIDNKIRMDNMHKAEDKLIGEDMAFIPIYHYTSCSMQSPKLKNVLVDTLEIRRFFYSYIE >gi|343387694|ref|AEM23184.1| extracellular solute-binding protein, family 5, complement(2913606..2915204) [Brachyspira intermedia PWS/A] MKKIMTLFLMAASLFVLSCGGSGGNNNDAIVINMGAEPRTIDPSLNSLNVVSAMLYHPFESLTKIGADGKLTGGMAESWDISEDGKTYTFHIRTNALWSDGKPVTAYDFEYSWKRVVNPDVAAQYASLLEIIKNAKEINAGNMDYNELGVKAIDDHTFQVELVDPAAYFLEFMTTVSVFAPVRKDIIEQYGDDWTLSPETYICNGPYQMTERVMDEYITFEARTNYYNDETVAKKLKFISMADPNTAIAGIRGGTIHFSALEPPSSEIEKLKAENYIALKDGVGTFYLSLNITNNALKDKRVRQALSLAIDRNYLVSNVTMGGQAAAQGFVPPSMDGINGPYREEAGILIDTDNYTANVEKAKALMAEAGYPNGDGFPVLEIRVSPGLHIIVAEAIQQMWKSNLNIDVTLKNDEYPLVLQYLLERNFDIGSMAWNADYRDPMTMLEIMVKGNTFNYGLYDNTAYNTLVNNARKTADPAVRMKYMMDAEKLLIDDMPFIPLYHRSYTLMVSPKLKNVVYNALGKHKFNYCYIE >gi|343387695|ref|AEM23185.1| extracellular solute-binding protein, family 5, complement(2915233..2916813) [Brachyspira intermedia PWS/A] MMFLVIISCGKKSETNNESVPSISINLGPEPKTMDPTLNSINVVSSYILHAFEGLTKIDSNNNVRPGMAETWDISDDGLVYTFHIRKNAKWSDGKPVTAHDFEYSWKRAVDPNTAAEYSYMMEIVKNAKDINAGNMDYNSLGVRAIDDYTFEVQLENPAIYFIDFIASTVVFMPVRKDIIEQYGDKWTLTPETYIGNGPYKMKERVIDEKIVFDINTNYYDADKQVAKQINFVLMSDPNTAIAGIRGGTIDFSALEPPSAEIEKLNNEGYIVANNAIGTYYIELNITNKAFADKRVRQALSLAIDRNYLVKNVTKGGQVPAGAFVPTEVRGLNSTFRKENKEYIDVNDYENNVKKAKALMAEAGYPDGANYPVIELKVSPGIYVLVGEALQQMWKENLNVNVSLVQEEFPITLQTLVEKDYQMARMGWTGDYNDPMTMLDVMTSGGGVNHTGFANKEYDDNLLTAKQTEDNKIRMAAMAKAENILMEEMPIIPLYYRADSFMKNPKLQGVVLNPLGRHKFNYSYIK >gi|343387696|ref|AEM23186.1| hypothetical protein, 2917003..2918238 [Brachyspira intermedia PWS/A] MIRNIITLSFILLIISCSNNKNNNINNNQTNTNAIETQTNETKTNELKQAEESNNNNTKNIEWISHHYYMKNDEGDFFSVYLNDRWPDYINSDSELMPNYEKIKAAFNYKNLNDIYQFYDKNSILDITNNRIYAEAENGDSIESTYSNITSFKMTSKSLNSSSKNINTTSSLKAAVYNYAYSDVSDTNEYGSASTFSYKDSIFLLIPDDTNKLEVYDKISFDINEGFNLNNLKRNENLEFEDKKGSISKLFENDMSDPYDEWLTNSADSYESSKSINITYFNDKTISITRTSTLYLGGAHGVYNNYNLVYSLETGEKIEVTNLIKDFDDDELRSIMRDKLLSIEDRDEESYLVPLDEITLADTSFYIYADGVHFVWPIYTITAYVLGETEIIFDFDEIRPFIKDEYLYIME >gi|343387697|ref|AEM23187.1| alcohol dehydrogenase, 2918724..2919875 [Brachyspira intermedia PWS/A] MAIIEFNIPTKITFGVDSLDCLPDTIKKYGGRTVLVTDGASFNQTGLIDQIVNKLNDSFINVMVYSDINSTSTSDAADIIANLVRYSRAESIVAVGGFKIQNTAKGAAIVVTNSGEASDYINGQPVYHKPLPIIAVPTILGSLSEISTGMCLYDKYEEVNKQNNESNVYSSNCIIDPTLYATVPVKYTISSALSVFALSFDIYMSNTLTSITEPLIVHAMKISMQGLKKLIADSNNIDNITTLATANMLCATSACHSSLGAIRALSIAINSVYAVNKSMVCSILLPHIMEYYITVAPNKYVVLSNVIDGIDPEMTPFEIANQSAQHIKQFLHNINLPTRLNEINIDRSKFDKVAELALKYPGMDQLPRTMNFDSIMTILDQAY >gi|343387698|ref|AEM23188.1| exonuclease, complement(2919872..2920735) [Brachyspira intermedia PWS/A] MDLIKKTFQHIEGIGPKKESLLWQEGAVDWEDALNNINYYAMPSSMREALKNELPKSIYNYNSKNYSYFLKRFPDSIIYRLYPLLMDKTVFLDIETTGIKPSKAHVTVIGCYDGKEMKVFVHGRNEHEFLDYIKNYSIIVTFNGSCFDIPFLERYFATTIKSAQIDLRFVLKDLGYTGGLKKIEQDVGISRGDDMEGVNGYTAVLLWNYYQDTKDETAIDSLIHYNLLDTINLEHLLRLAYNKYAESYNCQLLEYKTLPSVDHYKPNKKLIDALHKKPYKYAPKSED >gi|343387699|ref|AEM23189.1| cysteinyl-tRNA synthetase, complement(2920758..2922176) [Brachyspira intermedia PWS/A] MKDIVFYNSLTREKEVFKPINANEVGMYSCGPTVYNYAHIGNFRAYIFSDLLRRVLEDYGYNVKLVMNLTDVDDKTIKNSKENHISLNDYTKKYKEAFFEDIKTLGIKKATVNPAATDHIKEMIDIIELLKKNGHTYESDGSVYFKISTFPQYGELANLDKQELLDGASGRVLNDEYDKENASDFVLWKAYTEDDGEVYWDSPFGKGRPGWHIECSAMSCKYLGKHFDIHTGGVDNKFPHHENEIAQNEAAFNEKFVNYWLHCEHLIVDGEKMSKSKGNFYTLRDLLDKGLSPEAIRYSLINSHYRKQLNFTIEGIKQSQSAIDRVNDLIFRLKDINNTESNEVNENLLKELELSNEKFSDSIYNDLNISEALGVLFTLVKTVNTSFDSINVSTRDAILKFIERVNNIINCFNIGDTDKKADNEDEINKLIEERTLAKKEKNYQKADEIRNQLLSMGIEIMDTPQGVKWKRK >gi|343387700|ref|AEM23190.1| hypothetical protein, complement(2922622..2923119) [Brachyspira intermedia PWS/A] MVKSMQIEDVADISISDENSTMTFQELAENYASIIMNKNATPDQLEALGSIIKLWMDTLAANYTRDEMFNEYSRITSTLSCMSIHLILRIAIKDNNIPTESAQNNIYNSINNKFIPSFAEFKNDGWKTEFNFYVINMSAAVCKWYEDKSKKLDYPDFKVWRDGSF >gi|343387701|ref|AEM23191.1| hypothetical protein, complement(2923374..2927102) [Brachyspira intermedia PWS/A] MAKLSHLEKEYIKANYKNKSIDELTKKLEKDRELIEEYINNLQNSQKNNTKTNKEKVNKENGGNILSKLFSKKANQEPIYKRYEIKPYHLSKIDAIFAAVAFLFTFFLYLFTLTPSLSAGDNGELTTAAYFLGVGHAPGYPFYTLMSKLFTYIPFGNIAWRTNLFSGTCAAIAMIFFYLIMVKVLGQNRVERGFSPIVQIPALFASIAFAISDNMWAQATMAEVYSLNILQIASMLLILVYWFENVWKHANDEVPYYGNKYLMAFGFLYGVALANHHVTLPFAFAPLLFIAVVLFLIHKDRYINHIETSFISIFVFLVLLFIGGFGYYRFIMNYEAYLYFPPGVASNDSIFSIIFKPFADMNIMSDIFTALANGSYLRPDMIQNLKAPFYPTLYKGMFLVFWPLFLVVVWCLVYRYFLCKIDKFNNDNDFITGISISYYKMLLMLAVGVMIYAYMPIRARALPPLNWGQLNEPSGWENLSYLFSMIHRKQYGASGNDIAAAFILHPEQVSALINIFKTQLTVLGLLFLIPGLFQIFKKNKFIGIFSVFGLLSFAVSLMAYTNPPPSVRTLSFVEVFFLPATLYMLVIIGFGIQWYMEYFNTNIKNVLKKPSEETADTKLKPYHAISLAAILVIMIPIFIMNLSRNNNSKDFSNHDYSYNMMNSLPDNAIFATEGGDNQVFGLVYYTMVERRRPDLKIYDQKGNVFERIYGNLMKTDGRWLGDISDAVDKDFIESGRPYYMAWRRDGLYRLGDYYFKAYGLVFKVQPIKYALVDELEFFKVLTVNDYKDIAKEHLKRDYENEKIAADLNALLDEGLISVARKNIYDGNEEITFVKMYELPFPQFKTEEDYWNSYTMQGTAEEISHYDFLTREIFVSSYSLARIDLYNRRIKTYQKLLGFMGNGDVAKNGMTRAEANQKIAEFQDLKKQEEDRMLTIGFDMSNVYFAIGNQAIMDGNYERAAAMFEELIKLEKLIYPAYFNLTASYEYLARSKDTPYDKEAEYLNKAKETLERAEKTFHRGKDMGNAAREQNQTYQQIKQFMARIDAQLKTTRQQADNLKAQAMKEDTFESYSSYANYIYQNRQDIEETLWAKLEAKKRARSKDHIIGVNKDISILYANLGDTASSITILNDTLKMPDLTRDERRGIEFDLANIYLNNKMYDEAISTYSKYTNELTQDGAFALYAIGHIYIEQNKIIEALNIYNDFKRIMSPLAASNDVIANLDKDVESRRLQIMQYLGTMNNN >gi|343387702|ref|AEM23192.1| hypothetical protein, 2927530..2927664 [Brachyspira intermedia PWS/A] MNNTSSEIVLNDQEVQDFVTFLNEKKEFLDTGLGAFHTDNHSNW >gi|343387703|ref|AEM23193.1| hypothetical protein, 2927790..2927912 [Brachyspira intermedia PWS/A] MFSSESINKDFLVEFINGIKNQIVVTLHGGEPLLIGKKKL >gi|343387704|ref|AEM23194.1| hypothetical protein, 2927966..2928769 [Brachyspira intermedia PWS/A] MQTNGILLDDEWIYIIFEQYKKLNIEISISLDGSFEMNSLRINYNNQNTYNDVLNAYRLLSKNNINAGMLSVISKHSLNLYVEYIELIKKIDNLKFVKINPLFNMENNNLSKDSITPTEFAQFIINVANLYIKEEIYKKIAIEPILSMIQKINNKESKYCNYNKNKCYQFISLYPNGLVAPCDCFSSSEFEINIDKTISISENIVNAINENTIFNSLMNDCKNCNIFDFCNAGCISQRYYFRNNKDLYDDYCESKKMLYSFSSKFKV >gi|343387705|ref|AEM23195.1| Radical SAM domain protein, 2928931..2929266 [Brachyspira intermedia PWS/A] MLKNIKNNKLSSIYFGGGTPSLLNEHQINQIKELFDNYNISSEEVSIEIYPDICNFDYDNNNFFNRFSIGVQSFDDKLLKLYNRKNYDYKIIEDIIYKIKKIIITIKLILI >gi|343387706|ref|AEM23196.1| hypothetical protein, 2929263..2930099 [Brachyspira intermedia PWS/A] MIFDEYILEDDITKALKLSPDSIVFYPNTKNRGLKRLINIYDSLNKLSFSVKNYKPLGKSKFIYLKENTEESNYSKVEYRYIGNIIGIGHNSVSYINNESYLSIFDGENFYFNKRDRIPRYHNTIISSSFTGVLKNTINKYFKSLLDCNLFIEDENNNEVIYIPEYNYIYFYKYLLENYNNKYAEVFISSVSFGDSDYHNIEYIVNNYIDDETQNNLKDFSKANNICNNNKAFIRKKAPNKFILIEGIDGSGKDTFANFLQSEIKKDLNTLKMLLYQL >gi|343387707|ref|AEM23197.1| hypothetical protein, 2930592..2931545 [Brachyspira intermedia PWS/A] MDKGITLILNLVGNACNMNCSYCYEHDTIKYDTINNLNIAKINDVKEFLSSFIDYHHIHILFHGGEPLLYGKDLIKDILKFIKTNFLNKYTIQIQTNGLLIDDDFINIFLDYNVQLSISLDPIGDMDLRKANNFEYRKVVISNISKYIKKIDTIGIVSVAHKYNINYFKEFIDELINYKIKFLTINKIRYSTHNTDYYITEKEYNKMLKEILIYWINNKKYKSIDIQPFISLLTDSKICIYSSDNNKCKYFKTFYNKEYNTEYCSHIISNKMPNVDKKCLECYIYDWCGGGCLVDQKDETFCESRKDFKLFLDKIKL >gi|343387708|ref|AEM23198.1| hypothetical protein, 2931542..2934694 [Brachyspira intermedia PWS/A] MKINNLIANNIINLNKNIDFDKSISISGLSGSGKTTFCKVVSDESLKRIVTLLPKVEYRFLFSEFLKTNFSAQNITNIPLTFFLEKTSTSSNVRSTVGTYTPIFKTIRSLFAKKYKCPSEFFSFNNSKFWCKKCKGRGYNAMVECKECNSERYSDEIKKYTITCHDKEYNIIDFNKMNIFKLIELSDELGFNKSIKKMLDNMIKLNIGYLSLDRIVSTLSGGETTRLLLSEFITYSVNSLIIADELSIGLDEDSLYNMLEQIGDLSNNNQLWLIDHNNIVINSTQEKIYFGPKSGKYGGKIVDESPRPKEEFFEINESEAKDYYVFSDLEKRNLKIKELKIPENRLISIVGESGCGKSTLVNDCISSVFNKLYKNAKLILIGQNRNQSITSKSTIETFLDIKNNLSKIKDLNKNAPIEDIINMIDTNEKAYKYLSSLIDLGLGYLNLNRKIQTLSTGEFQCVHLISELFIDLNKKTLFIFDEPSKGLSQNILNKFMKYIHNILNNKNITVIMIEHNSYIIKLSDFIIDFGKRTDNIISHLNILSNSKYHDNKKKNNKNIMIKSSISNKSGIEYLKDEEVEDYFKKSENIFKGGILKNISQTARWIYGDYFSDEVIPEIAIDFESQLYSKNTFLYETLGIVNRIISLGDNVLIDDIDIFDYYNEENLCKCCRGNSVIDSFNINNIIKNKDSNLWNDLFEDDIMKALKNYNFQKIKFLFKEIKKDSKLDLNKDFSKMNPDEINTFLYGYWKTDFYDSDKKTRRYWKGIIFLIKKYMKQSKSKLKEIINSSKEEIICPICNGSILGHNNKFYIKNKDIRDILSSSISENMNILSDIEPINSVIDILGKDIKLNYDVSNLPQDKQAKLKLLEIYYSSFYGFYIVLKNINPFKDYAKKIIENIAINNKVIICDYKNINDTKENILNNDFSNYKINSFVYELFGFKKISTEINKIIKSYPCEHCNGKKLIREEGVFEGIDAYEVPCDICGETGISEKGLKQIIDGYSVDTWINGTISDVIKNNINIKDIKDIKIYSKIKDLNKKELMNLLNYLKEK >gi|343387709|ref|AEM23199.1| Radical SAM domain protein, 2934694..2935659 [Brachyspira intermedia PWS/A] MLTYDLKVGYSCNNRCKHCVIADSSDKLADNNINIDLTTEECLKQIDDQVKNGINKIVLTGGEVTIRKDFDTLINKCVENNLSITIQTNGRRLNNDFILNSIKDVDDIKFVVALHGAKSNTHDTITCVKGSFDETCKGISAIIDYKKILILKVVISKINAEELPDIVTLANSLGVKYICFAFPHGQGNARKNFEEVIPKYSYLQPILDKVVSNSIKYKINIEFEAIPFCILHKYMHLVGELKYLKSEEICSQVHEEVFDWNEIRHSIKRKGDNCQKCALYSICEGPWSEYVEAFGSDELKPIIVSEEQKNKILEALKQFTF >gi|343387710|ref|AEM23200.1| TPR domain-containing protein, complement(2935656..2936987) [Brachyspira intermedia PWS/A] MNSDSEDIYTNAFIGYCNVIISKCICEKEINSFFDIFEDTKILDKYSNIININFIVHNIIFYLDKVNDKFDNSFTNIIDKICNLDIIWEKEEYFNYIVKPDVNNIYEYKKLWILQYIMLDLLSVRKKGNIDKLCTYISIDVFMKLYKENKSKLKMFSVSRVNDYREGKIINDILYKKEININYDEMENNFGVKKKNISFAALQTSFTRVRDSLTMFRLYGKNTKYSKDDKNEGTGVCLVFNKNFFDVFFKNPSTPISDKKNNVLPIYSIMYYDHYENKLIFNQTPSNYQAIEIGLNETNNYKWNNDNSLKEEEKLKNRIGYIFNKIFEIFIKNNTEREKLKILYKLLINIQYLIKDAAFVEEQEMRILQVAEMSDNDVQYDEDSKTLYKDYLNIFDRDALREVIIGPKVKDPVSLIEGFQKDLENDIRTPYGLKFTISKAPLA >gi|343387711|ref|AEM23201.1| hypothetical protein, complement(2937347..2938375) [Brachyspira intermedia PWS/A] MNCLYCSEIIKDFYKEKNTFNLNNILEIIDGLPRDTHIIFHGGEPTLSGKDNISSIINFIKKSEFIYKPAIQTNGYLDESWVDFFYENKDNLSLSISLDGNYQASIFRLFNKEKAFNKINEFLNLIDKRNIEFRCIATINSKSYNLMYDIIEYFSNFNNIKFLKLNPCFDIDNNGIKEYSITPLQYLKSLKDAFNYMIKYKTYKKFKLDPITDIIESFNNNNKEFNLKCNKFYSVYPDKSIMFCDAMHTDENAKSLFNSYPEYIEKEIEYCKSCNMLEICSGGCPSVRNMYRKYNEKLLEEYCQYRIEIKNIYCPILIIVRRYLCYYVNLMNYFIVKNMMNV >gi|343387712|ref|AEM23202.1| hypothetical protein, 2939045..2939527 [Brachyspira intermedia PWS/A] MNFLKTNRLTIILIFIIISYIFYNEFIKNNTNKEINIYNLNYIVEDNYIIEYNYNTDSDIEYQDIRRYRSDVDLDLEEDRVFIMFTGSLIIGFLLSFILLSKNRLPKKELIAAKIILIVFVIIIGIIIFINYENIKNILEYLSLPIGFIIGFVLGRLLFK >gi|343387713|ref|AEM23203.1| hypothetical protein, 2940034..2940618 [Brachyspira intermedia PWS/A] MKISILAVVLIIISFIFYDEMTKHNYNVSNVNVIEKNEESNIYNGNYIASDDDIILENSYDFNNSVETKEIRRNYLRWRDREHPNVDFEEDSKDLYVRLIIIFMVGCAIIGVLIDILFFKNASYKFNIIVLAVILVISSIIIYKIHENLAILNMRGSTESILELLAFFFGGIISFITLSISKYLRSKDNKKNNE >gi|343387714|ref|AEM23204.1| hypothetical protein, complement(2940764..2941396) [Brachyspira intermedia PWS/A] MKDIIFNLIYKINIPENDLFRMSALFLCSFIIVFLILLLIKGDFSFDEFIGDSNGIGLGIIIILVIAFFGVSGFFIIKYIENTYEYIFIAIGIITALFNIKDDNIKKTLIVALIFFLILLYAAFFNAPPTINDVSINNQNITNNYTNDLKSTLSTQRNIADLLLGYNNLFPSVLFGDITLKDYIIIGFIFILSTIVIIYIIKRIGKRKSK >gi|343387715|ref|AEM23205.1| hypothetical protein, complement(2941951..2942484) [Brachyspira intermedia PWS/A] MSKKESAKSIIIFAIFLFSPIIIPPALIILFSYRDTNIGFAKEVEINIKNYLETTYLKNISKEEKKENLTTYIKNSFFIKYYTAKAFFNTIFMRVSLLYAILAIFTGIIPNTKNEIKKFYRIMKEDKKSLLFTLFLFANVITITVLCVINAKSKIEYLAFSAIFFRKILDTFLEKYS >gi|343387716|ref|AEM23206.1| hypothetical protein, complement(2942935..2943228) [Brachyspira intermedia PWS/A] MDLKIPSVRVLIVYTLTYVLSLATTAIIAQKYYHEDIKIKEDIRETITTILVVFITLALIAFVLIVIAIYMESNREYLAFSGVIFGFIACIIIRKIS >gi|343387717|ref|AEM23207.1| hypothetical protein, 2943302..2943478 [Brachyspira intermedia PWS/A] MSKFDALVCLLLSIISFFSCIFLSALAKNDIAVGGIVQDKKIYIIKAITLTLLSFFYF >gi|343387718|ref|AEM23208.1| hypothetical protein, complement(2944247..2944822) [Brachyspira intermedia PWS/A] MKIKKKKNDSKDNVIVFILYLFLSLIIPSTAISFFAMADKNIKEKKEIIYNDKEIIDNNKQTNASNFDKEEVLQKIITSLLLKGNSSSKYSGSKVDLKILGIRVLIVYGLTYILSLAITAIIAQKYYHEDIKIKEDIRETIGTILVGLATLALMAFVLIVTVINMESNREYLAFSGVIFGFIACIIIRKIT >gi|343387719|ref|AEM23209.1| quinone reductase, 2945194..2946195 [Brachyspira intermedia PWS/A] MKAIQIKKYSKEIDINIADIPIPEISDNDVLIKVKAAAVNPLEMLILTGAVRLIQDYKMPLTLGNECSGIVESVGKNVTGFKTGDKVYTRLPISKIGAFAEYVAVDSKFISLMPKDYDFVTSAAIPLTALTAYQAFTEELEAKSGQTILITGGSGSFGELAVPIAKYLGLNIIVSGSERLKEHFINLGADKYISYNKENYAELVSNVDHVIDTLGASEFDKELSVLKKGGKLLSLRTSPNKKFAEDNKLPFFKKLLFSLAGSKYDKKAMKEQKEYRFMFVRADGEQLRKITKIVEDKNIKPKIYSTVFNMDNASEALRTVLKKHTDGKIIISI >gi|343387720|ref|AEM23210.1| predicted ATPase with chaperone activity, 2951217..2952740 [Brachyspira intermedia PWS/A] MHTKIYSEALYGIEGIPIVIEVNISEGLPKFDVVGLPDQAVNEAKERVIAAINNSDRFFPPKRITINLAPADLKKTGSMYDLPFALGILSSSAQIFFSDFMDKTIILGELALDGSVREVKGIFSMLLNAKELGITNAIIPFNNMEEANIIDGLNLYPVKTLKDAIDAIEGKKAPIVSEGKFNFSNEENENIDFSDVKGQEYAKRAAMIAAAGGHNFIMIGSPGCGKTLIAKRIPTILPPLTFEEALEVTKIYSSYGLLSKNMPIVKKRPFRIPHHTSSYVSLVGGGRNIKAGEITLAHNGVLFLDEFVEFQSSALQTLREPMEEKTITISRANGSISFPANFTLIAAMNPCPCGYYGDEKHTCRCSDIARKKYIAKLSGPILDRIDISIEVRAVEYAKMTSKADGESSASMRKTVIEARKKQEKRFKDNGLKIFSNSSMGIKDTEKFCILDDKAKNLLNMAMERFSMSARSYNKILKVSRTIADLDDKDIIGVDHITEALQYRFNLN >gi|343387721|ref|AEM23211.1| thioredoxin reductase, complement(2952975..2953907) [Brachyspira intermedia PWS/A] MSVYDSVIIGGGPAGLSAMLYLGRALTNSILIEKKGIGGQMMSTDAVENYLGFPEEMSAFELVARMQQHAEKFSKNEIVYDEVIKVENIKDEVKKVITADGNTYETKTIILAMGGSSKKLGTKGEDTFAGKGVSYCATCDGAFYRNKTVAVVGGGNSAFDEAYFLTRFVNKIYLVHRRKEFRAEPINVKHLTDTGKVEYVLDSVIDEICGDGKVNSIKIKNVVDGSMHDQAVDGVFVFVGQEPSTHFLKDTGLELKDTGHIVTDMSTMETNIPGVFACGDSILKPVRQVANAVGEGAVAAMSVTHYLNKA >gi|343387722|ref|AEM23212.1| hypothetical protein, complement(2954002..2955357) [Brachyspira intermedia PWS/A] MQIRNPIPIKFIFKSLFQDVKTSIVEEYSKIFYPTYYFSMQMTPIFDIVNQAPEAYKILITNFFPKHTFIEKAAMQVGNNYMSITKEGNGYKVVGHIVTNSSSNLYSSVPFEQLSIDSFYIKDGKPYIHLIYIANENVAFEYISQFNVNFNDVELRDIDNMHAYLITGNSKITFPISYSDTNAVKDNLDYNVIADIMTEEFDGTNEDMIKVSYKDNNYWGYKGTFAVANNNIQIGIIIPEKDLINKIQIPIILFLVVFIIVTIVIIVMLAIHYIRMIEELKRNHMNITKIIENGENTNVEFKSTLRYDSNTEKINKALEEVIMKSIAAFSNTEGGRLFIGITNDGEIIGLEHDYSTLRQPNRDFFELHLRTLIETYYGNAFSAEGIRIDFVTHEGKDICIVYIRKGREPVYTKITNKQGAKEEKFYIRVGNSSREIANASEIIAYVKKHFK >gi|343387723|ref|AEM23213.1| acetyl xylan esterase, AXE1 family, complement(2955597..2956577) [Brachyspira intermedia PWS/A] MAFFDLSLEELYKYKGSGEEPKDFDEFWLNTLNENNHKTESEYTLIDTYLKLFDVWNVSFKGYSKHVINGWYIAPKYARENNEKLTCIMHYPGYGGGRDYPNSHLLFPSAGYSIFVMEVRGQGAEGGNGATTPDPVGSTPHADGFLTMGILDKKDYFYKRVFVDAFKSIEAAKEHPLTGKIAINGTSQGGGIALALLGLSALKNEKIEAAMIDVPFLCDYKRACTITDTLPYNEIARFCKTNRMYENRAFETLSYFDGAFFAKRSKVKALFSVGLMDILCPPSTVFAAYNNYAGEKSINVYTFNGHEGGDNEQSERKLEFLNYLNL >gi|343387724|ref|AEM23214.1| putative thiamine biosynthesis lipoprotein apbE, complement(2956671..2957672) [Brachyspira intermedia PWS/A] MKKKIYFSIPIIAVALIIAISFYRARDKYVTATVVISDTILNITAETSDKNMDKLISSITNEINRMDNIVNPYNTSSEIGRINSESLSGKTEIEISDEMAHIFTTGLKYSKLNPSFDISVRPLIELWGFGVKENQTVPLKQDIDNALANIDYSAASIITNEDNKKILKLSKPLTFDFGSYGKGYIIEKLKNVFAEYGIKNYLIDYGGDTYANGVNSKGKPWIIAIRNPRNDADGYLGLLESTNYTIVTSGDYERYFTQDGTNYHHIIDAEIGYPTYNSISATIVHTNAEEADALSTTAFLMGTNFFTNEAFKYKEAYIVTPQGELFIVTNDNF >gi|343387725|ref|AEM23215.1| hypothetical protein, 2957958..2958389 [Brachyspira intermedia PWS/A] MTKKLLALLISLTILSTSSLFADWVVPASSLPQKARTFIRRVYPNAKIWKVERDDGKFEVKLSNGASIDFMPNGNWLNIDGEYNGVPMSVLPQAVANTVRRTYPQARMIDVEKEWGNYKIKLNNMMEIYVAANGQLMGQQWDD >gi|343387726|ref|AEM23216.1| N6-adenine-specific methylase, complement(2958478..2959041) [Brachyspira intermedia PWS/A] MHIISGNKKGRKIITPKRDFRPTQGKVKEAFFNIIDIENKTFLDLCSGSGAMGFEALSRNAKFAAFIEIDREAVKTIFSNAKAIFSDNENIYKIKRVSAEDYVKKTNDKFDVIYLDPPYHSKIYFDVINNIIKRNILNDNGVLAAEFGADYYKKFLENEELKNIISGIMEYDIKTYGESVLIIFKYI >gi|343387727|ref|AEM23217.1| hypothetical protein, complement(2959080..2959610) [Brachyspira intermedia PWS/A] MVWGCAIVVGRGFYASKILLGLFVIGTGIYVLIRYCFNINMPFILYTPIFRMVIGMIIIFLGVYILFGMHYVRDSIPKNKKTKYNVYFKTDSIDLSELEIDRNRAIDINTIFSDTVVFISDKVQVHIKASSAFGSVSLPTGDSVSFGETNFVIGNSDKILYLNVSSAFAQIRVLYK >gi|343387728|ref|AEM23218.1| inner membrane protein, 2959919..2962621 [Brachyspira intermedia PWS/A] MILADIFFDIFIFPIEFIIETLFFLFKNIFNLSYSTSIFLLSLSVNFLSLPLYNVAEKWQEKERDIQNKMKPMIDNIKAVYKGDQRYLLIRTCHRINGYKVIYAFRGVLGLLIQIPFFIAAYNFIYSLSDLSQGSLFFIKDFSKPDNLINGINLLPFTMTIFSILAGMVYSKKLTIKESMPLYITSLIFLIILYNSPSGLLFYWNINCLFSLIKNIVLEYKLYKALNKDKILKICNISVILAFIILIVMSFKNKTDIKNILTLFIVIILTLNFDYIEKSLITNNNFIKYRYKLLILSCLIITVLSGLFIPTSLINNSVSEFNNHLNLIINNFSMSIGIFLFYPLFIYNIFSDKTKNYITLAFIFLSVIFIIDTFIFAGNYPNMNSDFMFDSAIKIINKDIIINIVIILISSLLIYFIITKSKFSILINIDYIIIFVLIASSIFYTYKVLSYDDTYTKTSYKLKNGEKIFNISRNGENIFVIILDRAIPSYWFDAFNRFEEYKDMFDGFTFYPNTVSYNYNTITIASIYGGYDYLPYETSTNKNNNLTNIHNQALLTLPLSLEKYGYKSYILEPVYANMSFNGDLSIFKSYSNIKAYNKDYIYDYSINKYTNENNIITSNLDNDKLIRFSFFRIIPVWLRKTLYSGGKWLINENNIINTSIENYALLDSIKDLINIDENGNNYNIMHNNTTHEPHYFLPDLLPSVSLNYIDTNDLKIYKDTNSVRHFYANAASMKNIVKIIDFLKKNNVYDNTKIIIISDHGYRINSKYFEKPNTKFIALYNSLLMYKDFNSKGRLNIDTNFMTVADMPYLAVNHIKDIKNIFNNKIITNDYKTNGANIIRIRSWKPENQSSNTYDFNSYYHVNNNIFDTNNWKFYRWYYSSNYSKERDLSLGFIEETTND >gi|343387729|ref|AEM23219.1| hypothetical protein, 2965108..2965848 [Brachyspira intermedia PWS/A] MENIIDIINKAQLKTIDKDTFLSIASMCSFIPKSITENNTWKKLSLSAKEVYRTLVANYDYELGIAKTTHSQILNEAGIGGNATIVKSLDTLEEKGFITRVESKAKSHHYLMPYQEKFYATICNFEARDFSILYTVNKKAKKDTQIKQVTNKLFFKVCYNLSCLGIDEPQKLIDKYSSDGNQLRIILSMCNYVYIAKEKNLNKDINLNKYLIDSLKRGNITENIFDEKTMNTIKSILINRKQNITE >gi|343387730|ref|AEM23220.1| hypothetical protein, 2965853..2966122 [Brachyspira intermedia PWS/A] MATKKTTTNKKDETKETKKSATEKTTSKKEEPVKKTTAKKTTEKAEKKEEPVKKTTAKKTAEKAEKKEEPVKKTTAKKTTEKAERKKSL >gi|343387731|ref|AEM23221.1| hypothetical protein, complement(2966088..2966369) [Brachyspira intermedia PWS/A] MEVNGFVSVLVSFISLVSTVFSSTVAISATFFQVLPFFNFFYSFFTGSSFFSAFSVVFLAVVFFTGSSFFSAFSAVFLAVVFFTGSSFFQLFQ >gi|343387732|ref|AEM23222.1| conserved hypothetical protein, 2966626..2968494 [Brachyspira intermedia PWS/A] MDDDENLDNTRNTTDEISTSKPVISSVFAAHNIKTEETEKVEEKNEQIEDTTATEESNTETIASSAIVHNNTSSPYSFETFESNREKEEKTEEVEKTEENNYTQDENTEDKASEEIETKEDLIEEKETVVEETKELDVIAEEKTEADTDEVEKIEETVKEETVKVEEKATYSKSDIFKRPVIIPTDDEHIQKSKFNQEEIDTAIKSAPTIDENASVENYKDYSSSSASETKIEELKETINEKIQELKDKEIKIIETEDELKTSSLPEIEKKPAEPYVAPDHSISENKKSNKIVPIVGIIIIILGLSFLGIQFFSGRNNEIDDNFYEEVTNNNTLNTNDLTTNNVISVTNNINTNITKPQTNNAVNTNTTRPQTNNTVNTQTNTTRPQTNNALNTQTNTTRPQTNNAVNTQTNTTRPQTNNTVNTQTNTTRPQTNNAVNTQTNTARPQTNNAVNTQTNTARPQTNNTVNTQTNTATPPTPPKEPEITPPTPPTPPPNPPTANTNAAANNTQANNNTLAYDTDTYKTKWTDTLSSIATAELGDSRRWPSIAVLNENIIKNNPDSIVFNIDIKIPNGGKKKLEDMNDSEKRALYNDYIKVSEMYSKMGKQNLANTIKSQANSILK >gi|343387733|ref|AEM23223.1| hypothetical protein, 2968507..2968887 [Brachyspira intermedia PWS/A] MKKSNKSNNKNSILTFSCTGCGICCKEKGYVFFNDDDIKRASKLLEISPLVFINKYLEYEEGYGYYIKVTDDKACTFLDENNRCTINSAKPNQCGTFPYWKEYMDKNGNLISGKFKRACPGVKIKK >gi|343387734|ref|AEM23224.1| hypothetical protein, 2968974..2970425 [Brachyspira intermedia PWS/A] MNDLIEKYEILTVKELKTIKDQLIAHNIPLFRLDKERKVIVFPTEQLGLIIDNEKYSNLKIYIPKNFSMFIEEFKSITQTNNSDNTSDESTPYVFRTPKESEKEMGKRISEISKMTYKEKVNTIKNYDEKLKEIAVDKETGINKNTAQQIVNVGNDVGLIAKVTMFESIQKIKGEEITQEQAKEENQEITETTTNLVTTIVDMLAANTETQKVFDELRNYSDGGVMSHSNRVFISYVNFMVFYNNLINRRHLVHKIRTSYTSKYKKFYEQVENMFNKEGIHKNLATVEDCIDKGIKIIEEREMNLYSVGALLHDIGKVKDLDYFEGANGRDYERIKKHLFNSYALVSQTSEYPLEVILTVALHHEYYGLGYGPYEHLHALKLKKYPNFQIQRIMTYDAKAIDECEAFAYFPAKMLEIIDVYDALIDPARKYRGGKTFTPEEALNIMREDFIEKHVKLDPILYDVFVEFLSNSIEQDLMSCKLI >gi|343387735|ref|AEM23225.1| conserved hypothetical protein, complement(2970509..2971126) [Brachyspira intermedia PWS/A] MIRYILLISFFIISLSSSFLYSQDNLNDNPTNALKSRLFFTERDKLTSKMNIYTSWKETYKYLRDNRFRFYKRAGRTLTLEFRYKYPSQLYVNNGTPIIFTFDDGSTLELTNIQKVIYNPYLMGDINYYDVEVRYKFNQDSEFESFANKSISNIRFNFINQFGEEDYEDIGISILSTSNWQEIFAAFKNGIDALEEIQGTNDNNY >gi|343387736|ref|AEM23226.1| Heavy-metal-associated domain (HMA) containing protein, 2971286..2971654 [Brachyspira intermedia PWS/A] MESIIILSIIIIIAVFAVINYIKKIKSGNCCSSEGAFQAIEKVKVKDKNKNNYPYKQIIKIGGMTCTHCAKIIENNFNKIEDVYAKVSFDNEEAIILTKKQLDNKVFEDAIKESGYRYYIKN >gi|343387737|ref|AEM23227.1| hypothetical protein, complement(2971950..2974223) [Brachyspira intermedia PWS/A] MKRSIIATTILLLISISLVALTFGIGERMTIVSYNDNNTDYLFDETEKNHRIDMYNPDSLSLVTSKPIYDYDLSVDLEDIYTEEEISADSDIEYLNQNMLLSDEEMSTEMPNPNILPAMAYNANNIDKTADKLSVAVDLAIQNARNREAPRVAIDLSKISVFRYEPVVINASVYTEDVVKNISIYVRYKKDKIVRMNGDERHSINVFKVKNSEYKGTYLHPFGGDLGEYQAVVLVQTKNGVYGYTKDFTVKGRQSPSAKETKKIATLEYAIDLTTKKIPSVETGEPTTYDAIYDWVRYMKCDMFWAIGGQTTGWTAGITPEEPWAKAMIKNIENLASSKAKGNVELGAYVMSYFAAGGGARKGGYEVSIGYNSATQSLVESRHISLDDPKRVQDIIDILKRYDSNPNISYLGLDFIRTGEVDGYEMVDEMVELTGVYVPSNWSTMSKAARMRWLAVNRGRKEIGMKWRWFRAHKEALIIKAIKDSGIRKKLWAFTLGWNHGQEHGQDPYMFFDAGIDYDAVMIYEASRPQHVSMLTAWPQYLSGEYNVLVGNMIDNRLQDGSLRPELEYMRRVYESEAKFNRSSRIRGIFFHDISRMLWSKFRGSGNGIREWANINASIVSRIEEKYSENPFNVTVKLDERNRTGVLTIVNRTSKMQNDVTIKTDLAQALSTIVLDNETVDIGPGETVEIGFRYAYGRSRYSSLMAFRVASSSGEENVAVAYTLLNSLRARPKQEESPTLAKSSDDSKKEDEKVKDN >gi|343387738|ref|AEM23228.1| site-specific recombinase XerD, complement(2974251..2975183) [Brachyspira intermedia PWS/A] MSVKQVSDQEILSMYLNYEAVEKGLSSNTLESYKRDIVIYLDFLSRNKKSILKATRKDIEKFLSERKEQGSKSRTVARNKVSIVNLYKFLVMENYISKNPTDNLEVIRLKRVLPESLTDTEVDDLLAVHNEKTDKGLRDKAIFELMYSSGLRVSEICSLKIDDIFFEGKYLKICGKGKRERIVPINDRALDILQRYIQTSRVIMVKGKKTSELFLNFRGDKISRVGIWKIVKEAMKKSKIEKNIYPHTLRHSFATHLIQHGADLRAVQRMLGHSDITTTEIYTHVDSSHLKKQIAKHPKHSKHARQNTNI >gi|343387739|ref|AEM23229.1| histidinol-phosphate aminotransferase, 2975586..2976569 [Brachyspira intermedia PWS/A] MNKEIFLDKNENPYKPSKNIIKELEKFDIDSLRFFPEYSPQQLDEEMSKYLNVENNNIISVNGMYEAFACIINSYDKYKIFIQEPYRDLYTRIFLYYKMHYEVIEAREDYNICLKKHIRNKNSIIIASNPNAETGMFINIKEIEEFLKHYEGIYVIDESYINFAGESAIKLINEYKNLIIIRSIAHSHSLSGLNINFIISNSENIENMSKLRQKYGINKISETITLAALRDEKTSYNNIFDIVLERERLDTLLSKEGFIVVPSRANFLLIKHVNKTSDYIYEELIKRNIFVKKYDKENILANFLRVTVSTHKINNMFLNELKDIIYT >gi|343387740|ref|AEM23230.1| D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain protein, complement(2976968..2977924) [Brachyspira intermedia PWS/A] MNKPKIVVLDGFILNPGDISWAEIESISDLTVYDRTDYNKVYEAAKDAWGILNSKVVIDKKLMQSLPNLKYIGMLATGYNVVDIEAAKELGITVTNVRGYGPQSVAQLVMAFVLSLSFRIVEHNNQVHNGDWIKCKDYSFSSYPLMEIENKTMGIFGFGDIGKEVAKMAKAMGMKVLVYSISKKENVENASSIDELFERADFLSLNAPLNKETENIVNIDLLSKMKKTAFLINTSRGGVIVEKDLAYALNNDIIAGAALDVLSKEPPTEDNPLLTAKNCYITPHFAGNTLEARTRLMHKVYENIKAFLEGNPINVLTK >gi|343387741|ref|AEM23231.1| Protein of unknown function DUF2314, complement(2978216..2978347) [Brachyspira intermedia PWS/A] MGKIIEINKDNFVGILDNKPYYIESIKYGDEIIFKIENIIDIY >gi|343387742|ref|AEM23232.1| Protein of unknown function DUF2314, complement(2978332..2978511) [Brachyspira intermedia PWS/A] MSEYYLENAFELNKEYTDTFEIPSKEEIDSLKVNDLVKLIFVENNGSTETISERMWVKS >gi|343387743|ref|AEM23233.1| putative molecular chaperone, IbpA (small heat shock protein), complement(2978741..2979187) [Brachyspira intermedia PWS/A] MSRRIFVPTLHSIFSNANRCNSTGNCGHYNGYNAYNDYHNRVSNYRIEEDDKNYIIEMDMPGVKKEDLEIGIKENILSISAKRKKTFKSENGESREEVISSYEQSFNISTKGIDVENIAANLNNGVLMVTLPKKEELKYEKKIEIKGE >gi|343387744|ref|AEM23234.1| heat shock protein Hsp20, complement(2979288..2979707) [Brachyspira intermedia PWS/A] MLDDFRSFDEAFGSLYNNDEVRKLSHYNIEEDDKSYTIEMDMPGVRKEDLEIGIKENVLSIYAERKRVNKQKLIESSAENSENKENDNEVVVSKYEQSFNISTKGIDVENIEANLTDGVLKIVLPKKEEVKYEKKINIG >gi|343387745|ref|AEM23235.1| biotin--protein ligase, 2980111..2981094 [Brachyspira intermedia PWS/A] MGKNLKENIISILESNKGLFISGEKLANDLNVSRAAVWKVIKSLKNEGYDILSVSNKGYALSKETDILSSKIIKDNMPKYRDNFNFVIYKTVESTNIVARGMAMNGADSGTVVIAEEQTSGYGRNGKSFFSPYGTGIYMSIILNLKKEKKIFNSSFITTAAAMAVSKSIEEISNENTQIKWVNDVFINGKKVCGILTEGAFSFEDGKLDYAVIGIGINVNFPKNGFPEEINNIAVSINKMQNNKDIRNILIAKILERMYEYYFNNVAFYDEYKKRSFLIGKKVSLNIDNEEHIVKVLDIDKTFALVAEFQDGKIDRIVSGSVNHRVS >gi|343387746|ref|AEM23236.1| biotin synthase, 2981243..2982109 [Brachyspira intermedia PWS/A] MANGIRKYFCSNIFDMCSIINAKSGKCSENCKFCAQSSHYDTKCDEYDILDKEKILEQGKSDFNKGVLRYSIVTSGRALYGKEIDEVYDAIETINKETEGYVCASLGLLDEEGFSKMKNAGLKRVHNNLEASRNFFPKVCTTHTYDDKINAIKSAQKAGMVVCSGGIMGMGETWEDRIDMAIELRELGIMSIPVNMLNPIASTPFENIKPLTEDDMKRIVAIYRFINPRAFIRLAGGRGLMKDKGRSCFLSGANAAITGDMLTTAGISIETDKKMVEELGYKIQLKED >gi|343387747|ref|AEM23237.1| dethiobiotin synthetase, 2982144..2982791 [Brachyspira intermedia PWS/A] MAKAIFITATGTDIGKTYVSGLIAKHMKDKGLNIGYYKAALSGSLDITDSDAWYVKQQADLLDSYDEMVSYTYKHAYSPHLAAQIEGNPPDIKVIKNAYKNIDNRHDYMIVEGSGGIICPIRYDNNQKIFLEDIIKELNIPSLIIADAGLGTINSTVLTIEYMRSKNLKVNGVILNRFEIANEMHDDNRKMIEEMTGVKIIGVVIDGILKLDEKI >gi|343387748|ref|AEM23238.1| adenosylmethionine--8-amino-7-oxononanoate transaminase, 2983239..2984579 [Brachyspira intermedia PWS/A] MTLEEKDLKYIWHPCSQMKDYEELPPIIIDRGKGIYLYDKNGKEYIDIVSSWWCNLLGHCNEKINANIKAQLDRLEHVIFANFSHEGAIKLCEELIKIIPNGLTKFNFSDNGSSSVEAALKMAFQYQHQIGNTKRTRFMCFTDGYHGETIGALSVGSLDLYAKIYKPMLMDTIHIEAPDCYRCKYNQNRDTCKCECFEDAEKKFKEYGEETCAVIVEPLLQASAGMRIYPPLYLKKLRELCDKYNVVFIVDEIATNFGRTGKMFACDHANITPDIMCISKGLTGGYMPMAITITTDKIYNAFYADYNEGKAFMHSHTYSGNPLGCSAALAVQKVLREDDIINKAQVRAKYLNNKLKEKLLDHKNIGEIRNIGLINAMELVTDKNTKEGFDSKLRMGYQIYRKALQRGLLLRPLGNVIYFNPPLIINEDEIDNAVDLCVSSINDILK >gi|343387749|ref|AEM23239.1| hypothetical protein, complement(2984697..2985215) [Brachyspira intermedia PWS/A] MRLSVFKVGSIVKGSGARFITISLLLISFFEQDTNTINSINKPAVIIFLNICFSFALILYFYFLVYYYTNKKLTKLKIFSIYLNNYILSKIIFLFLLLVGTSPHTPTSFVATGEARLWREAKRLHLGFNLINYLTCKTKLVLFSTNFILALFATFCGGKKLTILYKDIGLQS >gi|343387750|ref|AEM23240.1| oligopeptide ABC transporter periplasmic subunit, 2985184..2986662 [Brachyspira intermedia PWS/A] MDPTLNTDNLTMIYILHAFEGLTKKDANNKIIGGAAESWDINKAGNIYTFHLRTNAKWSDGKEVKAQDFVYTWRRAVDPKTANKYSYYFEVIKNAKEVISGEKTIEELGVRAIDDYTFEVELNSPTAYFLELAAYPPFYPVREDIINEYGDDWTLKPATYIGNGAFKMTERNFDKSIILERNTNYWNNENIKPNKLTFLLMEEPNTSLAGVLNNSIHFAKPFPRNDIESLKQKGIVHIVPVAASYYYRFNLNKEVLKNEKVRKAISLAIDRDYIVKSITRCGERPAGSLVPYGINDIDGDFRTKAGEYIISSNYQKNIEEAKRLLSQAGYKNGRNFPVIDLLIATREFDINIADAVQSMLKENLNIDVRIVKHEWASYLQNMYDRNFDLAVYLWYADYNDPINFLNIFKSDAPNNYGSYSNKAFDDYIDIASTNKNNQIRMHALHLAENVFMNDNAIVPIYFYSEALLVSHKLKNVEYDSQGLYRFFNAYLE >gi|343387751|ref|AEM23241.1| xylulose kinase, complement(2987307..2988824) [Brachyspira intermedia PWS/A] MNYYIGIDLGTSSVKSLIMTSNGKISALSQKDYDFDKPYYNFAEQDVNVWWESTIFTIKDSLNQLRKIDSNYKISGISFSGQMHGLVPLDKNGNALRKAILWCDSRSVKELNYINKKIGLDKIMQINHSPIAAGFLLPSLLWIKNNEPHIYEKIYKVILHKDYIRYKLTGIIASDITDAAATGVFDSDNSFWSDYIIKELNLDRNIFPDIFYPYEISGSITENASKETGLEIGIQVSYGGADQVMQAIGNGIINTNTASITIGTGGQILMPIDKPIYDKKNMASHTFNFLFPNTWYYLGAALSSGLALKWARNNFCNTDETFKNIDSKVKDIKSGSDGIIFLPYLAGERTPHMNSDASAMFLGLTLNHDRYHILRAVMEGVVYSLKDCFMILTDDLNIKCNRLIASGGGSYSDVWLQIQADILNMEIYVSKTKEQAALGAAITSAVADKEYSSYEEAIKNIITYNDKPVTPINENVKIYFEYYQIYKECYKRNFELMSKLKNIAY >gi|343387752|ref|AEM23242.1| adenine phosphoribosyltransferase, 2988968..2989480 [Brachyspira intermedia PWS/A] MELKDYIRNIQDYPKQGILFRDITTLLQNKDAFKYAIDKMAEQISSEKIDYIVGAESRGFLVGSALAYKLNCGFIPVRKKGKLPYKTISEEYALEYGTDTLYMHEDAIKKGERVLIVDDLIATGGTALAMIKMVEKLEGIVVGSSFLIELKELNGRKEIEKYPVHVLIEY >gi|343387753|ref|AEM23243.1| co-chaperonin GroES, 2989592..2989858 [Brachyspira intermedia PWS/A] MSSIKPLADRVLLKVLEQEEKTSSGILLPDTAKEKTQKAEVIEVGDSEDIKVKKGDIVIYDKYAGIQIKEGDTEYLIVKNEEIVALIK >gi|343387754|ref|AEM23244.1| hypothetical protein, 2990089..2991318 [Brachyspira intermedia PWS/A] MLKYFIIFLAILNIVYAQDNTTNKDPEYKFTYEKENNFTIYKESDETNESNTTNTQNEISIMLERRGFPLVNRLVRFTSLHPDMFDFEIDENQKEEILLKEIDENEETALNTNESVNMYTNIYVVPTDENGIAKAKLNLKNPGNGVVLMHILYVGSTGNTNISYEEYAYVNIEEKKENRISSKLLIGDSDDVNIKSSILITSTLFPSLFLVSIALIFISYFKHIYEEYRNSKSKIIIYTFFGFASIKKNFALMIFIILTELLIVACFLLLDSYIFSVILIAFFIAGFLMKREKIYAIAFFILACISTIYLYLETFSTHIATEYIVNNAVMGNPVFVFFFFLIFTALAGGIYIPICVLILYQTVFVMSDTSLITALIGIFVSSIFYIVKVKKDIPFLYRLNLLKIKDNNR >gi|343387755|ref|AEM23245.1| hypothetical protein, 2991322..2991600 [Brachyspira intermedia PWS/A] MVFDLLRDLELLLSDIVFSGINNIDYSTIDKIEVLAKRFEKISMENIKNLLIEFTDSLKKYKTDEDKRTNIKEVSDNISKIEFYIRNALSYE >gi|343387756|ref|AEM23246.1| SsrA-binding protein, complement(2991608..2992096) [Brachyspira intermedia PWS/A] MASKKDKKSGSNTISSGEIVKNKKALFNYELVEKFEAGIVLLGTEVKSLRERSVNMSDSYASFKKNGELFIVNMHISPYHFGNRNNHEPLRERKLLMKKRELKRLQGKIKEQGLTLIPVKLYFARGKVKVELALAKGKKLHDKRETLKRKTLDREMERYIKR >gi|343387757|ref|AEM23247.1| hypothetical protein, complement(2992222..2992782) [Brachyspira intermedia PWS/A] MDHSAHTAHKSGSEIIDLMHQPMMDQAFQKTANIDADFLFNMIPHHKGAILSSQKLLETTKNENLIELANNIITEQNKEVTEFDALIKELNAKNTDYSDIDTVAIGNEMQLIMDKMMADMAVIEITGNNDIDFLKGMIPHHQAAIDVSKKILEYTKDDKIKEIANRIIKAQEKEIEDMNNMINSMS >gi|343387758|ref|AEM23248.1| hypothetical protein, 2992784..2992990 [Brachyspira intermedia PWS/A] MLALVSAVSVFFSEQDINNKAAKEIINVVIIFFIFHPFIYFLSLIFIQSNNFYNMKKVKNYNDIKNYI >gi|343387759|ref|AEM23249.1| putative RimM protein, required for 16S processing, complement(2993001..2993333) [Brachyspira intermedia PWS/A] MFQLKDINNIEDAQKLIGLDIFIDSSYLPQLDDDTFYEAELIGYKIIDTDNNIYGEITDVYSLPSNYVFEIKLKENNNIVSIPFVKAYFGDSDKSNKTICIIQKPIFDDD >gi|343387760|ref|AEM23250.1| R-binding protein (contains KH domain), complement(2993507..2993749) [Brachyspira intermedia PWS/A] MTEEKELIEYLAKKLVDEPDGVSVKVIEGEKSTILELKVNQSDIGKIIGKRGRIAHALRTILFAASMKSGKRVMLEIIDN >gi|343387761|ref|AEM23251.1| hypothetical protein, complement(2993856..2993993) [Brachyspira intermedia PWS/A] MNVEGLKKWLSNGAQPTYVVKSILVKEGLMEKDKGAPLERKKKEH >gi|343387762|ref|AEM23252.1| Signal recognition particle GTPase, complement(2994163..2995518) [Brachyspira intermedia PWS/A] MFGNLTKSISNVFSKIQGKKVLTDKDITDSLLTIKEALLSADVSLEAADKFLEEATNRAIGKEKLEGVEPANQFVADVHDTLVNMIGEGESGLKLEPVEKTTITLLFGLQGSGKTTTSAKLAKYYKDKRRVMLVGLDVHRPAAMEQLAVLAREVGVPYHIDTKEKKAYKILKKALSIAKKEQYNMILVDTAGRLEIDEEMMLELRRVVNSANVTEKLLVVDSTAGQSVYDVAKSFQNNIGINGVILTKFDSGVRGGAALSLKYATGSSVKFVGVGEHLDDIDVFDAKRVAGQILGMGDIVKLVEKARAAISEKEAQEMLQKVIENNFDYNDFLKQIEATAKMGGLSKMTSMIPGMANVDTELLSREEEKFKKYKAIIQSMTKKERLALFPLNNSRKMRISKGSGQSVYDVNQLIKQFTMMKNMMGSTKKMDKLAKSLEGMGMSIDDLNKLM >gi|343387763|ref|AEM23253.1| putative Zn-dependent peptidase, complement(2995656..2996921) [Brachyspira intermedia PWS/A] MVKRLTLKNGTRVVLEKMPMLDTVSIGFIFLTGSANEKKEENGYTHFIEHMLFKGTDKISSKELIRNIEGVGGIFNAFTSRHLTSFYINIISKYFDRAVDTLENIMLHSAFREDDINREKKVIIEELKMSNDTPEEISANQFFAAAYKGTSMSFPIGGNINNIKKISRDKIYSYFKEHFNSNNLIISIAGNFDIDYAVDRLEKIKLEKKTRTVNDELPFYYKTITKEKQEINQVYFSLVTPSYNACDNKKRYAMNIVNDIFGGSSYSRLFQSIRENKGLCYNIYSYNSSFINGGTFEIHGSTSLDRYAETIESIYYEIERLVNERISEEEIEEAKESYKGSMAFSKFSAEFIMNKNARHELYSSKYISFKELYNIIDKIDLKLVNEVIDEKLINKKFFLTSVGASGTKDISKALSSKLKLN >gi|343387764|ref|AEM23254.1| Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit, complement(2997104..2998231) [Brachyspira intermedia PWS/A] MNKALGLDFNNLLTGFYPPTIAQIIMMLLGAYLIYMSIYYKKKPLLLLPMGVAILAANMPLPKMTEDVVSGFLGLMHSGADSGVYPVLVFFAVGTMIDLGLVLADPKNFFIGASSQIGILVVFYIMSSLNLGEDLSAATAIIGAADGSLAMYMASLITEPKYFAAIVMSAYLYMELLPLLQSGLTKVLTTTRERKIPMNYLRQVSRGEKIIFAVIAMGLCGIFLANSFPLIAALLFGSILRESDIIKNFSINLQKSLTGILTMLIGIAIGSSASADYFMTFNTVIIFAFGLLSLILSTTIGIIAAKVINILSGGKVNPIIGSAGLSAFPIPAWGAHVYGQENSSSNCLLLHAMAVNISGIISGAIVMGILLTFFH >gi|343387765|ref|AEM23255.1| acetyl-CoA carboxylase biotin carboxyl carrier protein subunit, complement(2998247..2998645) [Brachyspira intermedia PWS/A] MTKQYKITVNGKTYDVSVEEIRPVASNKTVSTIVSAPVNTPKPAVAPAPKPAAAPAAPIDENAISVKATMPGTIVSFSVAVGDKVQEGQVVATLEAMKMENEITAPASGEVKSIHVEKGSSVVEGQVILQIK >gi|343387766|ref|AEM23256.1| sodium pump decarboxylase, gamma subunit, complement(2998736..2999056) [Brachyspira intermedia PWS/A] MEHNAAITIFGIMSVFIVALVFYILSLVLGMIFKTRNIKKEEEIIKVVEESKTKEEDLIDDTELVAVITAAISAYTGMSNNRFIITSIKESKTPIWGMVDRVNKLK >gi|343387767|ref|AEM23257.1| Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta), complement(2999086..3000630) [Brachyspira intermedia PWS/A] MQEKINELRKRKEKIEEGGGKEKNEERHKKGKLTARERILQLLDEGTFCEIDAFIEHRCSDFGMEKNKVPGEGVVTGYGKINGRQVCIYAQDFTVIGGSLGQMHAAKICKVQDMAIKLGCPCIGINDSGGARIQEGIDSLRGYGDIFYRNVQASGVIPQICVIMGPCAGGAVYSPALMDFIFMTDKSSNMFITGPQVVKAVTGEQVSAEELGGAFVHSKTSGVASLMFPDEVSTLEGVKKLLSYIPQNNLEDVPLENTDDDPNRADEELSNVLPDAPNKPYDIKEIIKRVVDNGEFFELQPLFATNIVICFARLDGKSVGIIANQPNSMAGVLDINAADKAARFIRFCDSFNIPLVTLVDTAGYLPGVGQEHNGVIRHGAKLLYAYSEATAPKITLIIRKSYGGAYIAMCSKHLGADMVYAWPSAEIAVMGPDGAANIIFKKDIDNAQDPKKVRAEKIEEYKKEFANPYRAAVRGYVDDVIEPEYTRSYLINALHLLASKRETRLPRKHGNIPL >gi|343387768|ref|AEM23258.1| hypothetical protein, 3000942..3001460 [Brachyspira intermedia PWS/A] MSKKIFLSLLFVLALAVSCKNNVAEPTITTTITFDILSEQLYTADTSFTISKEAPSIIPITTGKIINSIIYLSPTPIGDNNDAATAITPARLKDGLDKTFASIPNSTINYEVIPPTITTDGKQTITFDIIMTPKNSYDKFDTSTFRKTLYLKEVTEKKIVYGIQYEAYWAAN >gi|343387769|ref|AEM23259.1| hypothetical protein, complement(3001770..3002576) [Brachyspira intermedia PWS/A] MFLLLFIFAISCSNPSTEPSNDDTTNPPTEDKYVASGMPSSYDGTAWKFYSADGNTYDVTIKDGGISGLKYDNNSAAVSFDKSNIYKSVNYNNILLVYADSYKGYIKIYDTSDAAYLYITDGTKVINGFIDNRTIQGRGVSSQCEGTWEYVEEAVSASTFRTHKLVIDKTLISYSLIYDQQGENVNSRLSIPTSWFKVNGTGATAIYTDPVVYSEGLVIDSEGNLTFNYTPIKSYNSPVVENGKVVGETYTYINLNTLDKYTYTKSVQ >gi|343387770|ref|AEM23260.1| hypothetical protein, 3004107..3004748 [Brachyspira intermedia PWS/A] MKKIITIACLLIIALSGNLMAKTGFEVNVLFPFGVSLGTYTGTDASKYTKADAGFEFGIHVIPGYYFGISNIALGIGLDIGYQKDVFAFGLKGEKGRYGASFDSFNLGLMPRIDLAFISIGVGGGFKFPIAGLMYDKRGSNGIAQASMYDTKTIYREFNKPFIPYVKVTLDFILPLNLTAGIYISYDIPFMESKTYDFKLSSVDLGAQLGIRF >gi|343387771|ref|AEM23261.1| putative acriflavin resistance protein, complement(3005139..3008225) [Brachyspira intermedia PWS/A] MGIVAVVILGAVSLSRLPVDFLPDMELPFISIRTTYDNAGPEEVEKSVSRIIESAVSSVNNIKEVSSSSEEEESRVFIEFNWGSDLASATADIREAIDRIRKSLPDDAESPAVYKFSTDNIPVMEISFYGTDNLSALYNLVDNQILTSIEQVGGVAMAEIRGGLKTQIKVDVDMNRLQAYGLDINTIVSTLAMENQNISGGETYEGVYKYTLRTTGEFKTVNDIGNVVVALKTNSTPIRLRELATIYEGYDEDGDVMKVNGTPAVNVSINKESGANTVAVSDAIKKRLDSLNLPEGIKYEVLFNSADNVNNAIKGVLDTAWQGGLFAVIILMIYLWNVRTVLIIAISIPMSIIVTFTLMYFFGTTLNIISLSGLVLGIGMMVDNSIVVLENIFFYRNNGYGKYSSAIDGTSTVALAISASTLTTIAVFLPFLFVEGQTGQMFRDLCITVTVSMIASLAVALTVVPMLGARLVTTKKSKFLSKFENFFDKYFHSKVNYIYEKVLTFSVHHKNRVLIPVITIVFAVIIVGLMLIGKEGFPESDEGQLMASITMPVGTRKEQTGAFIDRMRKDMEDVIGKDLSRIQSRARSGSDANKGQIRAKLIDKSDGRTKETEEYVELVRKRLASYPATINVDSVTSMRGGGNSDSSGIDIDIVGEDLVRARELANNVMAALQDVPGLRDVRLKKSDASPELNVVINRDLASKMGLNINTVANSIKTSFGGTTATRMTPDNSDVTDIDVIVRLNERDRINIEDVKRMLIPTPSGMVPISAVASVDKNFAPTEITRKNDSRITSITASGYGRPMNQIMNDVQAAINQKVFIPSGFTIVYSGDYEDMQEAFGQLIQALFLALVLVYAIMASQFESYIAPFVIALAIPFGFAGSLFLLLVTGQTLSVYSGIGVIVLIGIVVNNGIVLIDYMNQLMHEKKINGDKAALIAGPRRLRPVLMTSLTTILGLLPMALSSGEGNEMYQPLSLAVLGGLTVSTMFTLVIVPTVYAAIRNRIPLKDYDAKDIASVETSINDALSTPGK >gi|343387772|ref|AEM23262.1| membrane fusion protein, complement(3008318..3009577) [Brachyspira intermedia PWS/A] MMRRISIIILSIVLILSILSVSCKKGAVDLKRKENPISVLVAAPIKQPLEEYLDLSAEIKAIKEVEISSDVPGKIANILKYEGSFVNKGDTIALIDRFVIGANYAYAPARTPIAGYVTTTYMAVGASIAASTPIANVADISQLEVEIQVPERSIAGIELGQKVIIRVPSAPNKEIEATITKRDYAVNPSTRTLMVKALIDNKERLLLPGMFSDVSILLNSADNVFVIPNSAMFSDDLGKNYIYVVKEDNSNNPPSEVQAANSTNVKYRAYTREVNVLFTSKDKVALSGGLEEGEEVVMFGREFLKNGSLVNRIENDPTILEYITPPTAVASADTNIINNNNNNTQKAQQSATKPAANTNTTVKNNTATQKPATTTKPAATVRNNTPAATTKPNTTTTVEKPKQTETNTSNDDAIYSIGG >gi|343387773|ref|AEM23263.1| outer membrane protein, complement(3009585..3010925) [Brachyspira intermedia PWS/A] MSISLYSQDLTDNIASNEAPEVKKISITLEDALMMAFDASKTLKQAEYDVRIAQVQKDASFSDLFMPSLSISGGLNLAESKEYSVNDINTGVYSSPDTWSASATLSKTLFTGFRNWNTDRARDVNLKMKKDTYYDERLNVDLNTKLNFYNTFVAQENYRVYLQQQLNYSNRMRESYIKYRNGQVSEYEYLNAKVQYETTKPQVITLSNQYQSLKLTFIRQIGLTNIADEVDLVGNILDATNIALPDMSYDDLLTVIMNNNIELKNMASNLEMLEYNRKVARSYLWPTLSANANVGITTVDKIKMENGTFKKNRQGEFNWGVGFSLNYSLDSLLPFSSTAKGAEEIELSIKQMEVSYDELRDTIEINSRDLISTARSQAVNLQSQAENARTAAYALQMAQRQYRGGTISTLELNDAEITYLNAQLAYLQAIYDYFSSTLQILKLLGA >gi|343387774|ref|AEM23264.1| hypothetical protein, complement(3011293..3013866) [Brachyspira intermedia PWS/A] MHYAVFIVKYFSLLRIIDDEKTDKNNKKDNNNFDECFKESIKDNVIFFPIRHHSPACSYHLKKIFESFKPDAVLIEGPSDCNDLMKYMIEEDTKAPFCIYSSYVDGNDEKYRCYYPFLDYSPEFTAIRESLKNNIHCSFIDMNYAFMIENSKPEKENNNNNNEENSEDIYSNKENDNEDKKKKLISIYDNDDNKFNVNAYTVELTKKAGLRTFAELWERDFEINGILKDSKDFIKSVYALGYYMRLIEDEDFETRNREYVMALNVKEALEKYNRVLVVTGSFHTKGIIDKLKEDEKDNKKLNKEYKNLKKYIISNTANYLIPYSFEDADARKGYRAGIEFPAFYNLVYKELENYSSKNDNDNIENMYLNVVMSFIIKASNIDRHNHNVSIPDCINAYYMAVNLAKLRGKHSAGVYELIDAAKSAFVKGDISLENTSNLDLMMKLLSGMSNGTVSSKSIVPPVVIDFRNKCKEYKIKTDKTEEKESILDIVKNESHFEKSKFFHKMRFLDTGFCKLEKGPDYVNKINKNLAREIWKYEYKTSVESALIDKSVYGVTIEELASNLIVERLNNRIEAREVSKLLIEANVMGIYSFFTDNYNKIEETILSDNNFISLCSCLNNLSYLANMEAINNNLSKDRESLFDNYDIMPVIESLAKQTFMLAVVNMDSMKNLNEEEALKNSHYIKDLYSFTLENPNYCDMDIFNDKIDLMLDNTFGSSHIYAVCLALKYKSGRLMADEFSNIVSSFMESSDIEAASYFLNGILLAARDILFINENIIESIDSAIKNLDEDKFLEVLPNFRYAFSNLSPVEIERFSGIIADKYNISKNKILIDVNLSIEEIQLASKIDNEVFDLINKTL >gi|343387775|ref|AEM23265.1| putative ankyrin repeat-containing protein, 3014356..3015375 [Brachyspira intermedia PWS/A] MKYLLILFLSIIIFSCSNNNNNNKESNNNNTDKAAINIDDSKDINQTEQSNTDDKDNKSNNSSINTNETEETTYYSYTDEEIVSFIESGDFQTIKKLIESKSLDVNYNLEIDEYSKSTPLIKAIEYKQTDIINYLLENNADVNLTLGYSTPLTEAMYDEELVRKLIDLGADVNLPAQSGFTPLMASHNNIAIAELLIEKGADIEAKDDYGINALVYASSDENEEMVKFLLAKGADANTVCEIENEDMVISPTPLMNAAYNGNINIINMLLENGADINYTTDFGTTPLMMAASFNHFEAVKVLLENNADTSITDEDGRTALDWAKLENFEDIVELLEEYN >gi|343387776|ref|AEM23266.1| ankyrin repeat-containing protein, 3015600..3016622 [Brachyspira intermedia PWS/A] MKYLLIFLLSIIIFSCNTKESNNNNTDKAAINLDESTDNNINKTEQSNTDDKDNKSNNSSINTNETEETTYYSYTDKEIISFIESGDFQTIKKLIESKSLDVNYNLEIDEYSKSTPLIKAIEYKQTDIINYLLENNADINLKEELTGFTPLMASFHNIAIAELLIEKGADIEARNVDGINALVYAVSLNDEEMVKFLLAKGADANTVCEIENEHIYMPPTPLMNAVYNGNTNIINMLLENGADINYTNDSDMTPLIYAAYKGNTNIINTLLENGADINYTNYYGMTALMYAASYNQFEAVKILLENNADTSITDEDGRTALDWAKLENFEDIVELLEEYN >gi|343387777|ref|AEM23267.1| ankyrin repeat-containing protein, 3017063..3018094 [Brachyspira intermedia PWS/A] MKYLLILFLSTIIFSCSNDNNNDTNNNKELNNNADKVTINLDDNTDNNNINKTEELKTADNEENNSSINTNEMEETEYYSYTDKEIISFIESGDFQTIKKLIESKSLDVNYNLEIDEYSKSTPLIQAIKYKQTDIINYLLENNADVNLTLGYSTPLTEAMYDEELVRKLIDLGADVNLHAELTGFTPLMASLHNIAITELLIEKGADIEAKDDDGINALVYAASFNDEEMVKFLLEKGADANTVCEIKNEHTDISPTPLMNAAYKGNTNIINMLLENGADINYTTDFGMTALMMAASFNQFEAAKVLLENNADTSITDEYGRTALDLAKSEDYKDIVELLEKY >gi|343387778|ref|AEM23268.1| hypothetical protein, complement(3018354..3018758) [Brachyspira intermedia PWS/A] MNKKIIFLLTLVFAAIISCKDNVTNPNTEIKKITIAERAGSYEATYGTSKVAFTLDNEGNITSFVRGTFTIIYEGEKMNIVQDPSSTQTIIAFQLENYTYVIQFESETEATGGQLLLSLPGVSQPPAFTLVKIK >gi|343387779|ref|AEM23269.1| hypothetical protein, complement(3018797..3019591) [Brachyspira intermedia PWS/A] MGDIIKNDKKILLIFIIVLSISCSKNNNSATNPNSPSSSDLNQWKGIYKSISDEQGNILMTLTINDNNSLDIVANNESMHVDPYIIQESSENIYTIYEKENNEEGIILIKILWEGRFVEIDLWNSVNGQLTSLGRVTLCKEEFYNVNSGISDYKGIVYTQFDDASSKPLTVTYEIDAQGAIIIKDSSDASQTIINPGFIVKVEYEQGLRYMNFIDPNSYIIFDKYSYRDNADNLISYDALLQNTAFGYPTIYVDLNSKTQEPAQ >gi|343387780|ref|AEM23270.1| Predicted phosphate starvation-inducible protein PhoH-like ATPase, complement(3020244..3021599) [Brachyspira intermedia PWS/A] MTENFIPNKKVFVFDTNVILHDFKSIFSFEETNIVIPITVLEEVDKFKKGSDTINFNAREFIRELDVIVEKNEELQGVKDIFKKGALLDNKSKVFIDVNNEEREEFKKVFAGNIPDHKILSCAYNIKCENHRVILITKDINMRMKARSLGIDTQDYNTDKIEKLSSLFTGIESISGDNARIYIKELSENKEIEVKGEHSIYPNTYFCYRVKEDDEAVIGKYKDDTKTIVHVDTDINAYGIKPRNEEQAMALDVLLDNNIPLVTIMGKAGTGKTLLALAAALAKRREYRQILLARPVVALSNKDLGFLPGDVNSKLDPYMQPLFDNLSVIQHIHSDDSDESKNIKKMLENEKIVISPLAYIRGRSLNKIYFIVDEAQNLTPHEIKTIITRAGEGTKIVFTGDIHQIDTPYLDERNNGLTYLIDRTKGEVLSGTVTLEKGERSQLAELAANVL >gi|343387781|ref|AEM23271.1| acetyltransferase (isoleucine patch superfamily), 3021949..3022515 [Brachyspira intermedia PWS/A] MNIEEFIKHCKEGNPISSEDKELAPLLYECSQNAIKVTMEINNSYHTTEEVRKLFEQLTSEKIDESFTCFPPFYTDFGRNIKIGKNVFFNTGCSFQDRGGITIGDNVFIGMNVIISTLNHGIEIQNRSTTYPSKVTIGNNVWIGSGANILPGVTIGDNSIIAAGTLVNKDVPSNVIVGGVPAKIIRNL >gi|343387782|ref|AEM23272.1| Hydrolase of the alpha/beta superfamily, 3022558..3023649 [Brachyspira intermedia PWS/A] MKKIILSATLILTFLISCNNNQSQNNQSKGGDNMDTRVFKIYTNIEMKKVRFKNRYGIEIAGDLYLPENYTNQKNPAIVVSGPFGAVKEQASGLYAQEMATYGFVALAFDPSFTGESGGDVRNTSSPDIFTEDYSAAVDYLGLLDYVDRNRIGAIGICGLSGMAITAAGTDTRIKAVATLSMYDMSRDMSKGHQDYYTPEQRRKIREYLSEQRWKDAESKTYALGNHEPYFDENNNLMASAMVVPEELPENADPVFAAFYNYYAKRAYHPRAINFVTSWTATMPVSFWNFPLMANIKDVSPTPILLVAGDRAHSRYYSEDVYKEALEPKELVIVEDADHVDLYDNMEKIPFEKLSQFFNDNLK >gi|343387783|ref|AEM23273.1| transcriptional regulator, LysR family, complement(3024183..3025100) [Brachyspira intermedia PWS/A] MYFGEYMEIRALKYFLTTVREGNITKAAKYLNLTQPNLSRQINILERDIGHKLFERKHNNIILTPEGILLKKRAEEIIDMIDKTRAEFNFTDELIAGDIFIGAGESWAMSLIASVMKDIQKTYSHIKYNIYSGNFQDITEKLDKGLLDFGLLIDPADLSKYDYLKVPAKDTWGLIMKKDSELAKKKSIIKTDLLNIPLIISRQVIETEMQDNDFSRWFSDTFDKLNIVATYNLIYNALIMVQEGMGYALCLDKLIDNMHNENICFIPLKPKLESGLNIVWKKNQEFSRASKIFLDRLTNEFNNKM >gi|343387784|ref|AEM23274.1| putative dual specificity protein phosphatase, 3025259..3025711 [Brachyspira intermedia PWS/A] MKKLYKNLYVGNDRDCEEFKGAIVHACQSCFVRGVRGNIGDKKVYQNNNDLYLNLLDISSLSFEYAFPMIKRAMEFIDEHINDMEVLVHCNFGMSRSPSIALLYMARKGYISNTSFKDALRDFHEIYTYYSPGMGMYRYFDNYWYEIMSF >gi|343387785|ref|AEM23275.1| DNA-cytosine methyltransferase, 3025823..3026794 [Brachyspira intermedia PWS/A] MCRFIDLFAGVGGFHLAFNSEYCVFASEIDKYASETYKLNFPDTRLEGDITKIDEKDVPEHDILCAGFPCQPFSVAGYRKGFEDVRGTLFFDIARIIKYHRPKAVLLENVKNLENHDNGNTLKTIINVLQDLNYYVCYKILNSAEYSNIPQNRERIFIVAFNKDTVLNYSYFKFPEPVELTNTIHDFIDQEKQDDVFYYNNTKYYEIFNEGMLNKNTVYQWRRHYIRENKSNLCPTLTANMGEGGHNVPIIRDDYGIRKLTPRECFNFQGYPKNFKLPNQSNSKLYKQAGNSIVYPLVKKIADNILKVINNINMSEETNAEFF >gi|343387786|ref|AEM23276.1| conserved hypothetical protein, 3026778..3027926 [Brachyspira intermedia PWS/A] MLNFFELDKKENKNYVNLMKIVAKLSRLYSDSDTPYIYYRAMENLFCYCFGAKNLSRSDIAFDAKLGNLGIGLKTFVGENKDYSFEKIAEFNKDSKLIKDKKDEREIMEFLANLRNDRINLAKNLYGISESLYHIIARRKKSLLFFETDYNEIDISNLRIERQKGSKEEKSLNFTDGNHLYKFNFSKSTLFRRFDIPKESSCTDVVIFENPAELLLSIDEITYNFKPKCEYVILPLYTVKEGKKIVQEKSALNQWNAGGRKRDPDEVYITIPSFIRNNFPNFFPGRDTPFILKTPIGEILNAKVCQDNNKALMTNPNKALSNWLLRNILKLKELELATIERLEILGIDSVIITKEKAGEYSIDIQSWGSYERFIEEVKTNEN >gi|343387787|ref|AEM23277.1| DNA mismatch endonuclease Vsr, 3027949..3028371 [Brachyspira intermedia PWS/A] MSDTKTPEERSRNMARIKSENTKPENIVRKYLFKHGFRYRKNDKRYPGKPDIVLPKYHTIIFVNGCFWHMHNCSRGRMPLSNKSYWVPKIKRNIERDKNNIINLESMGWKVIVIWECELKNKIAEERLKKLCEEIINDKN >gi|343387788|ref|AEM23278.1| riboflavin biosynthesis protein RibD, 3028700..3029809 [Brachyspira intermedia PWS/A] MQNNMHEKYMKMAIEEAKKGEGFTSPNPLVGAVIVKDGKVIGIGYHKKCGENHAEINAFLDAKEKGENVEDADIYVTLEPCSHYGKTPPCADAIIKNKLKRVIIGCVDSNPKVAGNGIKKLKDAGIEVIVNVLEEECRKLNEVFFYYIANKRPFIVMKYAMTIDGKIATVSGKSKWITSEKTREHSHRFRNKYSAIMVGINTVIEDNPTLNCRLPNTRNPIRIILDSSLKIDLYSNICKTAKEIKTFIATISDDDKKIKELESFGIDIIKTENDNGKVSLKDLMRILGEEKDIDSVYVEGGAALHASLLKEKLVNKALIYIAPKIFGGLEAKSPIGGEGIDDPNDAVKLTEGSITKIEDDLFLEYYLQY >gi|343387789|ref|AEM23279.1| riboflavin synthase, alpha subunit, 3029909..3030550 [Brachyspira intermedia PWS/A] MFTGIVEEIGTVKSVQSKVITIEASKIFDDLHLGDSVAVNGTCLTVSSFDNKIFNADVTQETLNRTNLGSLKNGSKVNLERAMTLSGRFGGHIVSGHIDGVGSIKSMKKDDNAIILTIEVPKHLMKYIVEKGSVAVDGISLTVASLTDNTFSIAVIPHTLKETVLYYKKEGDKVNIENDVIGKYVERLLTFKEDNDDSKKSNITMDFLLKNGF >gi|343387790|ref|AEM23280.1| bifunctional riboflavin biosynthesis protein, 3030633..3031832 [Brachyspira intermedia PWS/A] MENVYSTIDEALEDLRNGKIIVVSDDEDRENEGDLICAAEFATTENINFMATYAKGLICMPMSKEITNRLNLNQMVTKNTDNHETAFTVSIDHVETTTGISAVERSITALKVIDENAKPEDFRRPGHMFPLLAKEGGVLVRMGHTEATVDLMRLAGLKECGLCCEIMRDDGDMMRRDDLIDFAKKHNLKMITVSDLIDYRKKNEDLMELYAKAKMPTKYGEFEILTFVNKITKEHHVVLTMGDISSGEDVLCRVHSECLTGDALGSKRCDCGEQYDYAMRKIAEEGRGIMVYMRQEGRGIGLVNKLRAYELQDSGLDTVDANIALGFRDDMREYYEAYQMLKNLGIKSIKIMTNNPDKIKYLNNYGLEIKDRVPIQIEASEYDAFYLKTKKERMGHILD >gi|343387791|ref|AEM23281.1| riboflavin synthase, beta subunit, 3033394..3033864 [Brachyspira intermedia PWS/A] MKTFEGKLVSEKPIKIGIVCARFNEFIVSKLLGGALDALSRHNIKDDDITVAWVPGAFEIPLIASKMAKSKKYDAVVCLGAVIRGSTTHYDYVCAEVSKGIANVSLNSDIPVMFGVLTTENIEQAIERAGTKAGNKGFDSAMAAIEMVNLIREIEK >gi|343387792|ref|AEM23282.1| rubrerythrin, 3034064..3034552 [Brachyspira intermedia PWS/A] MNLKGSKTEVNLRNAFIGEAMARCRYMYYAEKAREEGKEDVAAAYEKFARNEQEHAKIWFENFHGIPTTEENLKESIINENYESIDMYLSYAKTAQEEGFDELAMAFMNVARIEDGHKKQFQSLLRASKVDIPSWQCDICGYIDSENKNPSICPVCKHKIKK >gi|343387793|ref|AEM23283.1| coenzyme A disulfide reductase, complement(3035014..3036354) [Brachyspira intermedia PWS/A] MKKVIIIGGVAAGMSAAAKARRIDKEAVITVYEKTDVVSWGACGMPYYVGGFYESPNTMIARTAEATIKSGIDLKVKHEVLKIDAKNKKVLVKDIINNKEFEDNYDSLLIATGAKSIIPNIPNINIGNVSTLKDFSDSINMREKMKDSNIKNVVILGAGFIAIEAAHALKHIGKNVTIIQRSDRVFGNKFDKEFSDMVIEHIKENVDLHLNEKVQSLEADNNNNVKAVITDKGKYDADYVVVAIGVTPNNDLAKEVGIKLMDNGAILVDREGKTSIDSIYAAGDCASIYDKVLDDQTYAALATGANKLGRMVASNLVGGHEKFIGSLTSACILAFELEAARTGITEEEAKKRNINYKTVTVKDLDHTHYYPGYQDLHIKLIYLADSRKIIGGQILGKRGAVLRADVIAACIHAGLTVDELGMLDLCYAPPFARTWDSLNVAGNAAK >gi|343387794|ref|AEM23284.1| TPR domain-containing protein, 3036571..3037575 [Brachyspira intermedia PWS/A] MDNSSDYSLQNKVNNMISHYKEICDREPHNHKARVDFGVFYTQLGNHKEAIELFKEALLIKNNDYSIYRLLGISYTKINNYYNAITYLEKACELENNDYISLNWLGKCYIEVGRYEDAVNVLNKSFMLAPKEYLNWRTLGIALYNLKRTDESIESFERAIELNKYDYNSLYMLAIAYKDKYEYKKAIDILKKVTEVEKDNYSAYFNMGLCFFMIDDFDNAVSAFNSALNIDDKDYLLYYYLGISLYETKDYINAISYLNKSIEINNSHSSSYYYLGLSYYSAGLYDNAGNVLEECVKLDGNNKEVYILLANTYNAMGDIEKSIIAFNKSKEIIS >gi|343387795|ref|AEM23285.1| conserved hypothetical protein, complement(3037572..3038036) [Brachyspira intermedia PWS/A] MKYLKLIFLILMLNINIYSQTMTENSLPLRAKNFLNINFPGNNIESVSLYQNGGGYEVDIDFGYKFIFYNTGLWKKISIINDETKNIGIPRSCIHKSMVNVIDNEYPHSKITDIERRDKNFLIKLDDKYLIEITGYGIIISQENLDNVQSEATN >gi|343387796|ref|AEM23286.1| hypothetical protein, complement(3038149..3038283) [Brachyspira intermedia PWS/A] MIKKFKNNNYNDSVIFNDDDYNSLIEEYNDIIKDNTSEKENDNL >gi|343387797|ref|AEM23287.1| 30S ribosomal protein S20, complement(3038594..3038857) [Brachyspira intermedia PWS/A] MPNIASASKRLRQNEVRNLYNRKIKSFLNTQKKKVIKAVESNDKNLASEEFKKYASALDKAARKSVIHSNRAAAKKSDMMKKINAMN >gi|343387798|ref|AEM23288.1| short-chain alcohol dehydrogenase, complement(3039340..3040518) [Brachyspira intermedia PWS/A] MVVEPKILNNICITAHPLGCAKEVENQINYVKSQPKVKSNVKNALILGASGGYGLASRIAIAYGLGAKTMSVSFEKEATARRTATPGWYNNEAFSSFAKKDGIEDKNLILDAFLNASKEEVIKEAKTFFNGEKIDLLIYSLAAPVRMDESTGTLYRSSLKPIGKKYNGIGVDFLTEELLEVSIDPANEDDIKSTVKVMGGEDWKLWTDALLNADLLAENAINVAYSYIGPEMTKAVYREGTIGKAKDHLEATAHELDKEMQDKIKGHAYVSVNKAVVTRSSAVIPTVPLYIGILFKVMKNKGLHEGCIEQMYRLLNEKLYNGGEVPVDSENRIRLDDWELREDVQKEVLDSWNKLTKDNLKEIADLALFRKDYMNMHGFDEEGIDYSQDVQI >gi|343387799|ref|AEM23289.1| 5-methylcytosine restriction system component- like protein, complement(3041095..3042453) [Brachyspira intermedia PWS/A] MIKLKDNTKHEKLINIKENISEEDIISIKEIASKTLSDVKDNIIIFPNSIKESKDLEEDSRIFDIINDSLLTNNIMGFISYNNTQIKISSRFAVNDNEDYFLHYMLMKVLSINIVNLEHSKDYDDSFDFLIYMFISFFKRALRQGLFKQYKLIKHNDANVKGTIDINRYIKNNIPFNGKISYNTREYSYDNNITQLIRHTIEYINNKNRYLLSYDSEIKNYVQQVFYSTSSYERNKRESIINKNLKKLSHPYYYEYEPLRKICIQILRHEKLKYGSNDNTVYGLLFDGAWLFEEYLNTFLSKENFIHAENRNSKNGIKLLDNAWRVYPDFYKLENDNNIVLDAKYKRLNYYDNESIDRNDKHQIVSYAYTLNAKKAGFIYPLEEVNCTDANKIIKIGVLNNAYNGYADCGIYKYALKIPSTKSNGEDFQNIKEFAEVMRNIENELIKVLNKF >gi|343387800|ref|AEM23290.1| ATPase associated with various cellular activities AAA_5, complement(3042626..3045073) [Brachyspira intermedia PWS/A] MNNFWVINTSNLKYSKNINENQIPSFLDIMEREHICLFGYFDSSGQTFKNKIELGDIIIVSQRGIREAYKRDPEHNYFSGIVNSDAYLCRYYDNDFQARKIKKFISLKGKKLTFKEDSISYPTVQPIYKLKTSNDKDKILIDEIKKIMDINMIKECKELLEQNYNLILTGAPGTGKTYLAKEIAKEMMKDNTTQIKDYKQFIIDYYNKNKDRLEKLKKEGDELREQFRKKFPIESLKNISIDDYAVGRGDKNSFCYWIEYGLKRELLDNFSALGSKSSYILYYDKKTGNLVNETDKTDDELIKEIGEELYKMATIENYDDKDSVFNKRKNYLSIKIYNTYHPYTYFPMMSNEDILSICDIFSIEKDNNIYKLNKNIKSFFDNNLKDIDSYIIKIILSENIKLLEGNTENINSKELDYGFVQFHPSYDYTDFVEGLRPIKDSDGKIGFERKDGVFKEFCKKALKNLIDSKKEVSELNKDTIIKNNLIRFIDDVSNIINEKGYFKIDGIDRKAAPLKEINLYDTDMSFDIDTKSAHKIKKNLDDMVRLYKIFISKSISEWNRSMLISAFGFESFITYVYGFLKAFYEKYNSKIEEEVKNNTNTVEKVQKKNFVFIIDEINRGEISKIFGELFFAVDPGYRGIKGKVLTQYSNLIDEESEKYFYIPENVYIIGTMNDIDRSVESMDFAMRRRFAWKEVNAKETQENILKSLDSNIKQNAIDRMNALNNAISEIESFNSSYHIGASYFLKLENYYKSSSDNKNKAFDMLWENHLRGLLYEYLRGMPDAENKLDELKKSYNSGCDNNTQSDSNTSQDSNN >gi|343387801|ref|AEM23291.1| extracellular solute-binding protein, family 3, complement(3045622..3046239) [Brachyspira intermedia PWS/A] MPHSDTDDIGGFDYDLMKEVAKVSDLKIQFVTMQFDDLISALNKKRIDIIIAAMTITEDREKLVNFSDSYLTAGQSIVVNKGNTNIITTNDLIGKTIGAIKNTVSDITASKIEGVRQVIRFDIAGSAFLSLKTGKIDAMVVDKLTCINYLQYDKDLEIVETIEFPKMGYGIAVRKEDTILLNKINKGLQEIMTNGTYQKLVDKYL >gi|343387802|ref|AEM23292.1| D-arabinose-5-phosphate isomerase, complement(3046901..3047863) [Brachyspira intermedia PWS/A] MNIIERGKTTLLLESENLKMLSDKLDSNFENAVKELFNIRGRVITSGVGKSGHVARKAAATFASTGTPSFFVDPNECMHGDFGMITKDDYCLLYSKGGESREIIELVNWLCRQNIPYIAITNDINSTLSKNAKITLLTYVKEEACPLKLAPTVSTTASLALSDALATALMELRGFRAEDFAVFHPGGSLGRQLAKVKSIMHTENLPIIFPDTSLQEALFKIIECKLGIAIVVDDKNVLKGIIVDGDLKRLLVKDDDIKNILSKEVKYIMNTSPKVIYEDTLIGEALHIMEGKITNLVVVNNNNNPIGIVHIHDILKIKAF >gi|343387803|ref|AEM23293.1| hypothetical protein, complement(3047895..3048023) [Brachyspira intermedia PWS/A] MKTAVKINPEKIDLYKKKLKDEKYIDKAIERLAGHLISAVID >gi|343387804|ref|AEM23294.1| Predicted endonuclease, complement(3048034..3048399) [Brachyspira intermedia PWS/A] MANKKIIGNLGEDIALKYLEGLGYTLVERNFKGKKTRGEIDLVMTKGVVIVFIEVKYRRQGSFGYAACSISDRKKKKLYETAEEYLIEKGLSFNQKCSFGAVLIDDTHYNREISFIEDIFI >gi|343387805|ref|AEM23295.1| putative HD-GYP domain containing protein, complement(3048409..3049641) [Brachyspira intermedia PWS/A] MAKLIKINIQDIKTKAEKKDIYLYNDFLASTGYIDLKEDDMQRFQKWDINEVFMEDNTSLDMEVSADFDKFLREYKVFKKIYLNVIKKVRNNLGGYKNNNLVNMNELNEILDEVLDIVNRNLSSVLQLLNLTGLPRADEYYIRSLNVSLISMIIGRAMKFSENRVKKLGIGAILYDIGLVKVPDKILEKIGKFTPEEYTEIKKHTVYGYKILKTSFRFEEDLAMISLMHHEYYNGKGYPRGLSGNQINLYSRIIAIAHAVEKMLKPIRIASSNTKIKDNKSTFSLMLEKSNANKKKDISLYDAVKEIIHGANTKYDPNISKTFVSIFTVYPIGSIVLLNDKRKGFVFATNPNFPIRPIIKIVSNENGEFTDDGETINLLETNQLFIAGVDKDNNFLEEVRTKILDTEEEK >gi|343387806|ref|AEM23296.1| flagellar biosynthesis protein flhB, complement(3049645..3049914) [Brachyspira intermedia PWS/A] MSKDNKDIKNAAALLYNREMHNAPIVISKGNNYLAKRMVDIARKHKVPVISDENTAKHLMQLEIGEEIPYSLYEAVSIILKYIYKLKAE >gi|343387807|ref|AEM23297.1| hypothetical protein, complement(3049919..3051013) [Brachyspira intermedia PWS/A] MFYNDNMLNINSKYFNLITNKNNAQIKDGDVVRYSIMRKLDNDKALINVMGNKLIALFKNGMTDKGFALVSKKNGEVTLTILKNAESLKEAREGIQNKNNANVLLNITENNSEVSTMLSQKGIKPSHENIRYFETILKYLPDLDSDKKKFILNAMSNGVYLTVEEINSLGNIFKQFNDIIGYIKNSNKNTEITEILLMLANSVIQGDDNNSNNTIAENLNNYINTNASFNIWFMLFDMLHGELSSDNSNMMMLMLKILSANRKNRNFNETAFMIPIPFVIDGEIKDVLLYISKDENNKNRLTFVVYNDDKELCKIDITKDEYENKYLITVKFFDKKLYNKLNRIKEDMEKELSIFDNIKMNYEG >gi|343387808|ref|AEM23298.1| flagellar hook-length control domain containing protein, 3051112..3052716 [Brachyspira intermedia PWS/A] MVNGLGNLLSFVDTNVSSNNSPYNLNNYSYDDSFANMLNKTQTDYSAPSSVSNKIERHLNTEENQTENNYNSYDDYYNDYNQYDAEENTTIEEKVSSSSENAAKKTDETSDNAEEAKSVNNAEEQAENKSEELNASSNKDNIEAKAEKLASGNKEENVSAKEKLALTKEKAKLLLQNTSNDKKADAKEVNTSDTKENILAKADKKENTKNTEEIEKIKKQIESLNAEELSEEDEKELEDLIDSLEALKAMIENEGSEDKKEVLAENTEENIEVKDIDNPEVKEIKVASNKDNDKNIETKDINDINIEDNAMQVDNNAMADANIDMNIENKYADKKDAAEMKNNNSTVNNTISDDKGAELTIINMKDSAEGANLKGYNHYNNNVSKTHNSTNLTDNMIKFQDLMGKLVEKAQVAVNNGKSEVLMSLNPEYLGKVRLKISMDGDNLIGKIFVDNADVKDIFTKNLDTVITSLSEIGINIEGFDVMLRQDMPNDGGFGEELEAIGNRFASENSNNVEEVKADIKAYIVPERKLNLLI >gi|343387809|ref|AEM23299.1| flagellar hook capping protein, 3052791..3053585 [Brachyspira intermedia PWS/A] MISADALRMSDKEIKILKQEVGAFNLQHNFQRDPTQNSLGKDAFLKLLTVQMSHQDPLAPMDNRDMIAQLAQFSSVEQMTEVNKNLDSMKTFYSSQTGYSMLGKSVEVMDEAGNRFLGPVEMVMENDTGVALAVRTDNGLITVRPEDVMIVHSSGDLMASEAAAVSQVREAQSEDEAAKVFESSLIDKAQIIRPSGDENNGEGINNEFGDMRAAIEAEINSATQSEVSKTDNANLNKTEKTVGMMKAEEALMNSKESGNKTIKK >gi|343387810|ref|AEM23300.1| hypothetical protein, complement(3053863..3054102) [Brachyspira intermedia PWS/A] MVFSCAKNNPLNSSNNITIRSYEGTYTGKAKYTVIPSTGTDSIEENVNLIVNKDSTLTFKTQKKMIKIIILQKLKIMQI >gi|343387811|ref|AEM23301.1| hypothetical protein, complement(3054199..3054795) [Brachyspira intermedia PWS/A] MKTKIFILLMILILAFSCSKNNPVSALGTGSDTGIESGGTDTGTEEGSGGEDTGTGTGGEDTGTGTGEGDTGGTDTGETTIGIIYAGTYTGKAVKTRINNITEEEKVVEDVILVVNKDSTAIFKTASLGDYTFEKFEKIANNDSLYESIKSDTMLFLSFDKNTVTVNFIKKESSRESIIYGNGHEYDKGYGDLTKADY >gi|343387812|ref|AEM23302.1| conserved hypothetical protein, complement(3054838..3055245) [Brachyspira intermedia PWS/A] MNRISSSNITKLEDNEVFVFGSNTQGAHGGGAARFAMNFGAVYGKAFGLQGKTFAIPTVDYTKSGKMAVSEIKKYVDKFLAFTLEHKDLKFLVTEIGCGIAGFKVEEMAELFREALKDEYDNVYLPQRFVDYLKR >gi|343387813|ref|AEM23303.1| hypothetical protein, complement(3055284..3055670) [Brachyspira intermedia PWS/A] MANDKNNKEDYVEINEDDIEILGEDGIYRKYEVYKRYQNKNKMKLRYWLPFITAVIYTLSPIDLIPDRIPIGKLDDILLLVISFMYGIKRANFSYNPIINIIIRNIILSITITGFVMMIIIYILAALL >gi|343387814|ref|AEM23304.1| putative membrane protein, complement(3055689..3056396) [Brachyspira intermedia PWS/A] MEEKSILSFIKMVSNMPLVKIDKHKYLVAAFASEYPSLLQTILEKGAYDAGVPLNIIDTKLREAINYEIAKSSAISFVSGLPGGIVGIGAVPADTAQFLCHALRIVQKLCYISGLPSFTLGDSMTDDEACLAAVYIGVMFEDKEAIFALNSIWKAIAEKSARIGFRVSSVVGYAVISSILKSIGIKIGSKSFMKSVSKAVPLIGGAVSAGFTYTSLNKMSNRLYNKIKESKYSIS >gi|343387815|ref|AEM23305.1| hypothetical protein, complement(3056529..3057401) [Brachyspira intermedia PWS/A] MTTLEFINISDSIYDLCTKYPKIKEALFDLGFDKIKNPIMFNTVSKIMTLEKAAKMKNIDNNELRKKLNEYGFELNSISNKEDRNDILKSLIVKLHCTGDIETIKREFEDKLIKVSAEEVHNAMHELIDNGMSIDEAKRFFYIRTLVLKDAMDNNTETNHKAIDIFEEENRCIEKLLNEIKSYDNINILNELYDNLNRHYIKKESLFIASLKKYGNDEPSKVMSRVDKDILNELKDIIDYGKNNKINSENIILLKEHISDMIFKEENILIPLCVSILSKEDFDNIEIKYS >gi|343387816|ref|AEM23306.1| N-acyl-D-glucosamine 2-epimerase, 3057625..3058767 [Brachyspira intermedia PWS/A] MLKDNIIPFWLKNGLDKKHGGYYTALDRKGGLIETDKSVWFQGRFAWVLSTLYADFEKKQEYLDAAKSGIEFLEKYCFDKAGDGRMYFRVTEDGKPIIKRLRYYFSETFCLVAMAAYSRASGDKSYVKKAREILDNIDRYQKEGLLIPKFDAGNRPTIAFGPPMIMLATVQELRKADPENKDYYNKYIDNLLKNIQLFLYEDKKAVLEQCNPDGTLQDHFEGRLLNPGHAIESSWFILREAIERGHDETLKALGVKIFDWMWEWGWDKEYGGIIQYMDVLGKPKSEYHHDMKFWWPQTEAAIAALYCYYFTKDDKYLEKHDMVKEYTKKFIDTEYGEWFGYLHRDGRISTDLKGNMYKGPFHIPRMYMKCAEIIDAINAK >gi|343387817|ref|AEM23307.1| TPR domain-containing protein, 3058954..3061515 [Brachyspira intermedia PWS/A] MFDKISLQFIIYKKYLDYFMTDALKYKIEKLISSKKIEDAIKLVNRAIEEYNNDEDLYFNRGKLYSIINMYDEAIEDFNKAIKLNPNNEKAYFNRGITKVKLEKYEEAIEDFNKIIKLNPKNERGYFNIGFAKASLEKYEEAIKDFNEVIKLNTKNEEAYFFRGLAKVKLEKDKEAIEDFNKSIKLNSKNEEAYFNRGIAKTKLEIYEEAIKDFNEVIKLNPNNEKAYLARGIAKSYLEEYEEAIKDFNEVIKLNPNNEKAYLARGIAKIESGKHEEVIEDFNKAIELNPNNENAYFNRGIAKAKLEKYEEAVVDFNKAIKLNKNNEKTYFSRGITKVKLEKYEEAIEDFNKAIGLNKSYNKAYFNRGILKINFGKYKEAINDFNKAIGLNKNYNKAYFNRGILKTNFGKYKEAINDFKIFSKDNNDTSKIIIIKIVQEFDKYNDIDKFFKLLIMDENKELWKNEPITNLIFHFKESKKFDDELIKNIKYLILYEYFLLKILSFDTDDENIEISHYTSLDLLLILLGCKNENSDEIGNIRINNISTANDPKEGNILESIFNRNDIDIKIGSDEKIVTLQTSYSRNRDSLTMFRLYGKREDKEATGICLVLDNKYFTDSYTSPFSYYDFNVNNISIKNDEYFTDSYTSSYDSNVSNINIEYKSNIKKEKEENKRNLYWVLYYNEKLNKLVFNKEDLKYSSNIIDLNEIKKYRKKLKEDDTIEDKIKYAFSKIFEYTRKIKEKNIDPKLYNYLFENIKYIIKHEAFFEEQELRMLVTSDYKSKEIKADKINNKLYIDYLKLFDQNTNYIKEIIIGSKVENNESLAEYIRKILHEKNTDKNKLDDIKVLISEAPLR >gi|343387818|ref|AEM23308.1| hypothetical protein, 3061792..3062625 [Brachyspira intermedia PWS/A] MFSLRNELRKRDLETLDLFTLAFSLFKQNFINFIILSLICCLPLILTGIYFPISTFDPEKLKTYEDLINWFKNDVTIGFYINIFLSLFLDTISIISVSLLVERLIYRNVKSATWAIIRSFKFLLPTIFTTFIYFILVFLGLTFFIVPGIAFIVFFVFIKNICALRHTWGIDALKYSFYLVKPKFFKTLFLLGFIFLFQQVFAMTLFPSSLENREGLLSYFIAMIVLYIFNTYFQIITTLFFLNRDYVSSSMQENEDDEYDDEEENDGNDNDENDIEK >gi|343387819|ref|AEM23309.1| hypothetical protein, complement(3062698..3063072) [Brachyspira intermedia PWS/A] MIKKIALFYLFLFALISCNANSDGSTSASAKYKEAPRESKGLTNFTGIWNAKFPNNESSIVIENGENVLYNDLKASSIEDLGNDRYKMTISADKTFSVTLKFKSDTEGTVEDDNLGIGTLAKSE >gi|343387820|ref|AEM23310.1| hypothetical protein, 3063227..3063700 [Brachyspira intermedia PWS/A] MNTKYNKEIENQIYEIIKKDNPTFEEISKKLNINYDDLKNYINKSSKKYKKSLVKKIRKAKEEYLKDVKIKIENALIKKALGYYSKEIVREIKTDKDGKESKTKKIINKYNPPSERAIIVFFEILKNRNNKRLEKAELKRNIQEEDSRINIKVGFDN >gi|343387821|ref|AEM23311.1| glycosyl transferase, family 2, complement(3063905..3064810) [Brachyspira intermedia PWS/A] MKISVIIPCYNEEITIKQVIEEFRKYLPEAEINVFDNNSKDNSVKLAKEAGTIVTEVNYQGKGEVVRRAFSDIDADIYIMVDADMQYDISEIKKHIEYFLDKKLDMLNIAREVVDEDVHRKGHTFGNAMLTGFANILFGKRFNDMLSGYRIFSKRFVKSFPAASKGFEIETELTIYALQMRLSVGEVPAKYFKRPEGSHSKLNTFRDGFRILFTIIYLMMTEKPIIFFNIISIILFIIGMALGISITIEYFETLKVDRFPTAILTICLLILSALSFAIGLIMNAIGRVISENRRFKYNSVK >gi|343387822|ref|AEM23312.1| hypothetical protein, complement(3064807..3067371) [Brachyspira intermedia PWS/A] MKNKLKKISLTTSIILLIFILFLIVLGNISRKGYFSDFNLKSHNEGKYTYAFRINYYNKIFRNNDIYGVYPNIQSILNNNKHIKKIDMNDYNGTPFGTLVTAKKLNVDEKIDNIDYKLQIKPIFFLIFCISIIYIICNLKSFNIYKNIMKIIYYFNNFNYRNIIKKIIIVSVPLFIFIFVLLFILGKNDRIGYLSDLNLNIDNTLKINNFNVNATKKLFTLKNTLNNKELLNYIYTNDSITNYSYNFEIKYYSKIFKNSDFYEVYIDTNKSINNNIFIKKIDMNNTIGTPFGILASDKVINENKIDNIIYTLKIKSHIIYAIFLIFFILILCYLIKVYCSITSFKSNNINGLIIKEDNIVYMLKNDYYFLFSLILIFIFLFYFIYWLFFPGYYQYWDTSEVIWRAYTENYDNWRPIIISLVLRILYSIFGYDTYYLFLINILSWFIGLYLIIVSLYTKFKNKLVILLIFLSFLGNIFFTKINSEKDFTATLILWLSLSIIFYSITGNIKNPKILFFTKALSIFIALIALLWRHNFIVTVYPILFIYLFINIEKINNVKKFILSIISIMFVLGISLIIMVKIFPLFFIDEDRAKTATYHTFLIQISACAVDSNDSNLIPKNWYLDGRNFEDVKKIYNTERGSVLADLYAVNFDRNAPFKILPPNPNIKKNIKKVWVKAIISHPISYMKHIYNYAKYIFTTEDWSTFLRKLNYRFDPEYIQQTYKFPFMSNEYYNSIHNKNIQFDKNKEKIYSFFYRYLPDINISFFVILSFVLFFISLFCMFKFNNNFLIFSFLVSFSSAATCIIVLLFSPAPLYRYISPVVHISIISLISFITFIYDIGGLKIFIKKLRSNSNI >gi|343387823|ref|AEM23313.1| hypothetical protein, complement(3067448..3067561) [Brachyspira intermedia PWS/A] MFMQQTANSKQQTANSKQQTANSKQQTANSKQQTFIL >gi|343387824|ref|AEM23314.1| hypothetical protein, complement(3067613..3070009) [Brachyspira intermedia PWS/A] MKQNKKTFLLSYLVFILAIILFIVIFSILGSVERVGYLSNFNHILENKYYFTLKFESSIFKNNKIYRVYPNTNEMPDNVTNIRWSGSYYGNLVLGDSSIQLKENDKIENIKYTVKIQKNVFLFLLFIIIVFPAIYFYVIPNIYYHHKSYIFFFVLNSLLYLITSNLIMPLFSMMKLDFNIYDFLYTYLFVMIAYNLLVHYPFNLGNIKNIRIILTALFCVVSIFSFFAIESISLTVLSMVILFSDMPNLYSSLITVLPMHLKIITITVSIIYFSSLLAFVILFIFNIYKIFVERNKIASLVMIAFIIFTVFYLFLKPKNIDIWSIDFVRNAKRNGIINTLNYRINYDRLNNIKPSKELVSDSIKLLKEYESKRDVSKLYLKSTKNIFDNIKKIEDDMHSILIEASSKNSNFVYNNENIDYEYIEQLKNNYYDVYTNFEISITNDLSKIEELKKGLKRDVYLIFLESFYDYSHFRKLFNKDPFPKEYRKWADSSRKIAPNVNNGSFYARLSGLTGSSPLYPKTQSEKIENTLPDILSKNGYNTIALEEALNTYNLKTFYPSIGFKSQLFGLGTTNINTYLGTNIDNLGSPVFAAGFTILGHTDSHLSNDLNFAENNKKFLDNFEGNDKLHIIETIDNSAMTAINIIEIRDTILKHSPNAIIIFKHDHLYPYLKAIIERSSIDEKIKTNFLNDYKPSPVLIWDGTNGAYKAPENFTPENIPLFIAANLNVDYTNSVISLLYKEEIDDTISTYNKFYHTTNDSLIDNSEVSNMMIFKYENAQRTLSQDIFQGKKHYYNFIK >gi|343387825|ref|AEM23315.1| hypothetical protein, 3070285..3070575 [Brachyspira intermedia PWS/A] MVKMIILLSIISIFAVSCSYQHRHLVGNGPQTGVTLTRKQWYALWGLVPVNDVDVEKLAGGSENYEIYTRSNAGDFFINLFTGIIGFTSRTVTVRK >gi|343387826|ref|AEM23316.1| hypothetical protein, 3070597..3071172 [Brachyspira intermedia PWS/A] MKTLYFIITLFLISCTNNSYKDIFSNRDINFKKLSLDNDILYQNKYDISDIKVKLMPLNNSVRLTDEDKNHIIKNTGYVKDLYHIESIFWEENTQTTCLVGYMKKDNNSLEKLINYINKMERDNNILKNYFYINGKKNIQYKIQLENTVLFYTIFEAKDSKYLVLSYTFPEKNEYASMYNIANSINSVEFY >gi|343387827|ref|AEM23317.1| hypothetical membrane spanning protein, complement(3071961..3072734) [Brachyspira intermedia PWS/A] MDKEIEDFNKDFDDEIFDMAFVLKRSCCKYNKIPWDKYYTLFVSAIALKNISANVIIENTHIIIHKKVKEPEEYLKILKDESIVKLKVRKEKDPDDFYIRFLLEDIIDTNYKDNDLNIILEKYSEIIYYKDEELGDFVLNKDINSFKKEMTWTESNISIFFDNIDEEFNKQSVDIIKKIFSNKKDIDSKLKECAAESIFKPHNMEREEFIKLISLESISIYSKNCITFYFDDIDGHTILVNSDWDFNFKPITELMFF >gi|343387828|ref|AEM23318.1| putative membrane protein, complement(3072928..3073731) [Brachyspira intermedia PWS/A] MDKEIEDFNKNFDDEILDIAFVLKKQNLSAGKSKGKYYTLLVSAIAYKNIITNEIIENENLLIVKEIEDTKHYFQIFRNKTIVRLKVRKEKDSSGLYMRFLLEDIIDTNYKDNDLNIILEKYSKPVYYKDEELGDFELDKSINMFNKNIEWDNNNISISFENIDEEVNKKSVDIIRKIFASKKDIDKKLKEYISENLIEDANTWNDDDDKPHISKEEFVKLITLTSITIIYENNITFYFDDGDIFSRHVIAVDSDYDFNFEDAHIEG >gi|343387829|ref|AEM23319.1| hypothetical protein, complement(3073759..3076242) [Brachyspira intermedia PWS/A] MKNSISNEEKIRNKFEEMFSHENNKDAFLDYFYGKSNSCPTLSKNYLYYAEEIFKFYFDENTSKGDKEVLSRYAKVIIKDIYKGNPNPNYIIITTYMIVRLCSGEDLEKVLIESYNIDIEEIYIDDKKYSKSQLKNNKGYEYIKIQNKNFNRFLILENYIGKEFNEYLEKVKNDSKVLLEKEPHLLLTILVYIINRDDDKSLIKQLLNYIDLLKINDEETISLLFTIVDKDEEVYKRLINILNKDNNIIYFIVNLDSVMITNIELCKRFFKKYSEDPTYHYFEAREVADEYLEICSFPKEYIFLNKIYCGGNTHCTSSLTVELKKLYIEDKTTFYKLYEIIEKSKLECLYLDYVVLSAIMLAVNDNKYNINANSIIEKLKEISLEFLKKRESIKSFDDIISKSIKYIKEKPNGSYSAYLSAIMLFDEINDEASKITDILLKYYRIYIKIYIYIQKIFYNKNILEIKEKLVNEKEVQLKDIYLFIKSEDDIITLIKNNLEETKNIIKEEAFINSITENTKCTISFINAIFSDELRSLIDNKFDFVFKVLDTERDQRIQNHCILIIKNYGISIRSEVEKLAVEGKKSSIKIYQEIIKYWDLQKIDADFKFKNIDEIEEYVNKQYNKEHEILIKDIDENILSNILLKDKKTVSPLKIVKYVFMEYAALKEPSILKDCNKIAEFFDIDSFRNALNNIYTNWIKNKSNTEIKNIFIQYNNLTEDKLLQLPSETTNISYTTYDIKLKNILIPYCIFQTEDKLLQLKIQIEDWASSDMNDSEELAAYAVYAMALNGSSFALSLINKIYLEVKNKKVKKAAKNVLKKAGKVLDIL >gi|343387830|ref|AEM23320.1| hypothetical protein, complement(3076901..3080227) [Brachyspira intermedia PWS/A] MENNISNEEQIRNKFERIFQYENNKNAFLDYFYGRSNSCPTLRNYYGYEAEDIFKFYFDENTKEEDKKALSRYAEAIIKDIYKNQNVHIILRLSTGEDLEKALIESYNNTYERTIYDKKYSKATLLNNEASKYIQIQVNNFYKFSELEAYVYKDFNQYLEKVKNDNKALLNKEPRLLLTILVYLINRDDDKSLIKQLLNYIDLLKINYEETISLLFTIVDKDEEVYKRLMNILNKDNNMIYFLVNIYKDMTRTIKLYKRLFKGYSEDKGYYYYTQKLIPEYLELCNFPKECILLNTIVNNNTLFISYLTVEAKKLYDEDKETFYKLYEIIEKSKLENLYLDYAMLSSIMLASGDNKYNIDTNSIVETLKTMCVELLKIMQPIQSFDEITSKSFKYVKEEPYTNHSHYLSAIMSFDGINDEASEITTKLLKHYGIYGKISIYVSIQKIFYNRNILEAKEKLVNDKKVPLKDIYLSLLDSKDNIITLIKNNVEETKSIMEEKSFITSITANISGTISFINCIFSDELSGLIDNKFDFVFKVLDTAKSKEIKKHCVSVISNNESIVRSKVEKLANEGKEASRTVYKEIIKYWDLQKFDDDFQFTSVDEINEYLNKYYNEGHESLIKDIDENILSNILLKDKKTKAPLKIVQYVFMEYVALKEPSILKDCNKIAEFFDIDSFRNALDNIYTNWLNNKADTKLKNILIPYCIFQPEDKLLKLKTQIEEWALNARGALAAHAVYAIALNASKFALVLVDTMSVKIKNNQVKNAAKDALKKTAKALEISEDELIDKIIPDLDFDKKGMRELHYGGEANRVFKLQIKNDFTIEVTDSNDKVLKSLPAPNSKDDKETADASKKELTLIKKNIKMITSNQITRLNKVLLNGRKWSYKTFTELFVENPIMNIFALKLIWGVYDEKNNLIESFRYMEDGSFNTFDEEEYIFEDSLKNKKNITLVHPIELDEEQLSKWKTQLSDYEISQPINQLDLLFEEVKEEHIKNNKIISFEDQEITAGEIMSMANKMSFERSRDIEDGGSYTYYELKDSILNIACRIDFEYMWFGIEANEKVTFKNIAFHRLDENGNCNAEEYINPLDINKRFTSSIYGTVKSYFMK >gi|343387831|ref|AEM23321.1| hypothetical protein, complement(3080426..3082093) [Brachyspira intermedia PWS/A] MSDNTNNLNNRNNTTFILYIVVCSIFLIALIIIYLLFSSSIKKSMDYSIGKFETNSQIQLSNYYEFLKEMVTNESFENKEFIKNTLEEAFKPNIDLLRETLKDSKDFSINTVTFWLAFLSLIMIIFTILGIYANNKIMESNQKQSELIIKDLESKAENSFNNIGELVKENKEYIENLKSDFDNIKNSLLSEMETIKDDAIKTKDNTLNEVNSIKKEIDSNKKESEDLKSEIYEIRDESKKLLKEMREERKAQSEEGKNIIEKIKIEGNTQKEEAKDLKSEIERIKEEAEKMLKEMKEEREVQKEESEQTLEELNKKAKEIESTLKKIEKQTKQSKINADRAKVSELFNRALRENDKNNKEKAIKLYTEIINEYNSNDTDSLNNRGVLYSDKYKETKDEEYFDKALEDYNHILRIDNNDYGTYINMSFLYLNHYEINKENKESLTQAEKYLNEGLKLYTNDLELINNYGILLYFKYKEDKKTVDLNNSEMYFNKSIGNTRTKENIGETYYYLHLVYDEYAKLDENISGYSKEECEKKSKEYLQKSKDLGYKHFMDK >gi|343387832|ref|AEM23322.1| NAD-dependent DNA ligase LigA, 3083091..3085082 [Brachyspira intermedia PWS/A] MNKEEAKQKIEQLTETINYHNKLYYTDDNPEIEDYEYDKLFRELENLEREFPELKKDDSPTNKVGGTILEKFEKFEHPIAMYSLSNVMNEEEFLEFDNRMQKELNQSKIKYTVENKFDGLALELIYEKGKLTVASTRGDGQVGENVTNNVKMMNNVPKSIKEKKKLIVRGEALITKKDFEALNKEREELEEIPFANARNAASGGLRQLDSAESKKRRLKFFAYQIANYKDFDLTNEYKSMEFLSELGFTVEGVHPNIDAKKVLETYYDIQEKRSKMDYEIDGLVIKVDDVKHQEKLGFLSRAPRFAVAFKFKPEEKETVLKNIEVQVGRTGALTPVAKLEPVQVGGVTVSNVTLHNPNEIKSKDIRIGDTIVVIRSGDVIPKITRVVLEKRPADSKPFEFPKKCPVCGGDTAVTDGDVIVRCINEECPSKITRYIEYFVSKPAMNMERIGKEWIAVFTKSGLVKTPADLYKITRDDLFKFERMGEKLAGYMLESIENSKNTTLKRFIYALGIRQVGETTADLLAKYFTSIDNFKKATIDDLQNIEGIGEISAKSIYDFLHNEKTLKLIDDLLAAGVNPVFEKVVTVESPLTGKNVVITGSIEGFTRNSAKEAAERLGATVQSAVSKNTNILIVGEKAGSKLKKAQDLGVEIMEADKFIKLANG >gi|343387833|ref|AEM23323.1| nicotinamidase, complement(3085884..3086795) [Brachyspira intermedia PWS/A] MSVKIPYEKIVNEDFIGKEVNPINQQDIYKIALEYSNEVIKEFEDESINLLIVDPQRDFIDMEKGALPVKGAVDDIKNIIRFIYDNMERLSSIYVTLDTHRYDSIFHSIMWNDFNDKPVAPFTEITLEKILNDEIIPVYDEEIQINYVKALKEKNAQNLMIWPYHCIYATDGWLIDKQLANILLFFETSRRVYINKILKGQDSFSEMYGVIRPEVPTEYTKNYDTSWVYDIANADKIYICGEAKDYCVYESVKQFCEIYHNDKSVTETINIMMNCSSAIGDNKACEQKYEELSSKYGIKLLNI >gi|343387834|ref|AEM23324.1| hypothetical protein, complement(3087269..3088489) [Brachyspira intermedia PWS/A] MYYNVNISNIKFTIYLQKDMFMRKIIFKAIPALIISSGMLFAQYYDPYNYQNGYNYQNNQNNYNAYQNNNIPANNYYNNYYQEFMRTLSEEANNPNSIYYSPGFYEQYNDYNAMHGNPYQDTMNAMNWASQNYNAHSYYNEGSTAQNPYQNNYYNGYDNTYQDPYQNNYYGGYDNTAQNTYQSGYDNYNNQAYNNTASYVNPYEELMKMLEREAKNPNSPYYSPNANQNGYNESYDGTAQNNYYNDYNAYDNTYQNNYYSAYDNTAQDQYQNGYYTGYDYNAYTQTNNNMSDDPYKLAAEALIKAAEELTIKANGMPNQNNTANQNLNNNNQPAANTKNAPLYVQDFYTPFKVPQVVLDTAAAKYPNVQILDVEVKEIGTFEVRMANSMRLYIDRNGNFLREIVDY >gi|343387835|ref|AEM23325.1| hypothetical protein, complement(3088549..3088962) [Brachyspira intermedia PWS/A] MKTLLKTISLTLMIIFLASCSNDITKTGSGIDSKYQGKYSGAINRKHQNGIEDGRATFTINNDGSVKGSVTYYGGSNPEDVELSKEIIIKNSDNSYSAEINFTGLKKYTFTFNNNMLELNIVNEDNSVTSGQLTESN >gi|343387836|ref|AEM23326.1| intracellular protease, PfpI family, 3089077..3089577 [Brachyspira intermedia PWS/A] MKALIITDNFFEDSELFYPYFRLVEEGIEVDIAALNKGEIKGEYFFKVEAKLDFSEVDPSNYKALIIPGGRAPEAIRGNENVKKIIKYFVDNNLTIGAICHGQQTLISAKVLEGKDATCYIGIRDDLMNAKANYKDEKVVVCGNIITSRCPDDLPYFAKEIIKKLK >gi|343387837|ref|AEM23327.1| hypothetical protein, complement(3089655..3090560) [Brachyspira intermedia PWS/A] MKKAIIKIAVCFTAVLFAVSCGNDANTVTNPPIMDDTYDFKVYLSTVSTAPNYDRINVSSDKTKVSKASSLEFSMTPGIVKEAQARITDVKKDNASSLVLDISDFTIDSTITDLTESVLTLTQSGINKVKNANLTAATEYIYNVDITFTSDNEKLKNKEAVVTVPIKILVIKNVTKTDIENIIKKANGGTITISGGDASFDLNSFQLNQSGSTITSTGDNGGTYKAQEAAELFWKITDDNLKYSPSAKTSPISGDGKTADFTITLQFKDGYEIEDSNYAFVNKDGIKLSLKLNGTGNWKEY >gi|343387838|ref|AEM23328.1| hypothetical protein, complement(3090613..3092688) [Brachyspira intermedia PWS/A] MKKESINISDRKYNIKYYSISDEKAKYPYILPSLKTLISKCKECYIVSKISGNKLHDKPYNVERVKISKTDDNTFVYNFIDIGSIKEDIKGIMTNYKDTILFFEIGVFADIYSYLRSHLQFDIINCFSNDGIIDISSIKDNIFDKLPIKKDKLIKRMQNYYDDNKNCILPAYKVHDSIFEEDKKPSNKVLYSMYHLPVLEKISELENMKLNLKDIADIFFSNDNKENINKSLVKKITLNKIKLIEESVKHLNYTELTKRIDNFKYLEEISLSKIIEHIFCLYYVLQHDSVLRDSYISSISIILDPEMEEHLSLSEYFSNDAIYFDKMFYHFVHRIKYLYLKMDIKFDCLFIGLEEYIEYQYNEVIKLCIDKYNEMKNELKDLFSELYSDDNSKMYRMHNLSHENYFDNENKFKSILNDGQHYVSLILFNYDFLKFLCSFIRFRIDYDIVEGGEEIVFSNLESKKYSNNKIYNIASIIDDINTSFYIAETLYFFNLYSIKSYKDILNSLHSCIVKLSCLNYELLKEYLNSNDIEFRNYIDEFNLMLKIAEEHKCIDDISVNSNKEVIDFLKTFEELKDVKRYEDIFINNSFFIYNQEIIYSEEDEEKLKKMEEKERKFQEEEKRERKIFFDANYKTIYKAIMYYIKVKESEDFKYDEKYLEEHFINALEYMYRVSYYKEYLIINNPNSNNNE >gi|343387839|ref|AEM23329.1| Phage terminase large subunit, 3093393..3094763 [Brachyspira intermedia PWS/A] MNIKFDILKPFEKWANTEKRLKIAYGGRGGGKSESIARILIAKSFEKSGVILCSREIQKSISYSTYPLLISIIKELKLEKFFNIKRNEIINKITNCKFIFLGIRECSIEEIKSIYNVRICFIEEAQTLTQRSYEILEPSIRAEKSEIWIAFNPRFETDFIYQTVSKFNLENKFYTDKNNNKYNYQEYEDNNILITFINYDGNYYFSDILNKSRLSTLKLMPKMYDHIWLGKIKNKQGKIFLYSKLKFYDDNLKENINKINSSEHKAVVDPAFGEYNCFTSAIIYTQIGEDIYLIDSGLIRNDSNSTTDESIINFLSNKNIKKILCESNFAQKELVKRLEKHFEVTPFYVHKNKAERIVNASYLIYDKVYFPKSWQKVPEGSDTDKWLKTNNGRGYIALRQLLNFDDSLVGSSIKGDAFSYLDFPDALSSLIFFGIEEIINEENDDKMNLVNAIFGE >gi|343387840|ref|AEM23330.1| transaldolase, complement(3095413..3096066) [Brachyspira intermedia PWS/A] MKFFIDTANVDEIKKANDMGVICGVTTNPSLIAKEGRDFKKTIEEITTIVDGPISGEVKATTVKAEDMIAEAREIAKIHKNMVVKIPMTDEGLKAVKVLAKEGIKTNVTLIFSANQALLAARAGATYVSPFIGRLDDISMDGLELIRTISEIFATHAIETEIISASVRHPIHVTECALAGADIATVPYSVILQMTKHPLTDQGIEKFKKDYEAVFGK >gi|343387841|ref|AEM23331.1| aldo/keto reductase, complement(3096151..3097002) [Brachyspira intermedia PWS/A] MFDSLKDTFTLNNGYKIPCIGFGTWQTPDGETAVNSVIEAIKSGYKHIDTAAIYGNEKSIGKAIKESGINRNELFITSKVWNKDRGYKTTLAAFEKTINDLQIDYLDLYLIHWPASVNKFNDWDNINLETWRAMTELYKAGKIKSIGVSNFMPHHLKSLMETEVKPMVDQIEFHPGFMQEETFKYCNDNNILVEAWSPLGTGKMLDNETLKIVASKYNKSVAQICIRWCLQNNTLPLPKSVTASRIKENTEIFDFVISDEDMKTINAMEYCGGSGHHPDKVNF >gi|343387842|ref|AEM23332.1| arylesterase, 3097137..3097730 [Brachyspira intermedia PWS/A] MNIVCLGDSTTYGYMVGRNKVWTKILNDKFHKENKNIKFINKGINGDMISGMLVRFDMDCIKENADTVILMGGVNDIFTCKPLEKIENNFINIINKALENNIDIIVFTPITFVKEAFSFFESNNIEEFENILKEYVNFINDYTSKNNIKSIDVYDLFTNKILKENNYYDIFFDGVHLSENGHSVFASEIYKELNKYL >gi|343387843|ref|AEM23333.1| TPR domain-containing protein, complement(3097734..3098000) [Brachyspira intermedia PWS/A] MKKSNENTSLKYLELAKEKEEIGEYKEALEYYEKSIEEDPDNIEAYFGLNLINSYIEMEKELKNDDASDNINKHIEFFNIFNEFLNKK >gi|343387844|ref|AEM23334.1| arbinose efflux permease, 3098120..3099334 [Brachyspira intermedia PWS/A] MSNIDNIDNNVSNVSENKLLAIIALVLLSFALGTSEFIVIGVLTEIAEGFNITEVKAGGLVSMFALAYSICTPFSAAFAGKFNRFHFIIFASILFIAGNFLCSLASNYTFLLIIRMFIAIISGALISVSISFSPYISTKDKRPMVVAWIYSGFSIASIFGVPIGTSISYYFGWRASFIFISIFSAVMLVLMFATLPKNTPTHKVKLLGQFILFKDTRFILSTFTILFGAASSYVLYTYLKPIFLDYIHIPNKYISAALLVFGVTVLFSNLLSGKLAEHNGVYRLRYVFMMQFICMIVLPFALLNAISSSIVILIIGFLMYLMNSPVQLNILDFTEREYPSCLTLASSNNSFSFNFGIALGSFVGSTIFDNFGIRWVGFGGAVLSTLAFLCIVYLYKINSKTNNV >gi|343387845|ref|AEM23335.1| rubrerythrin, 3099633..3100130 [Brachyspira intermedia PWS/A] MDLKNSKTAENLKTAFMGEAMARCKYMYYAEKAREDGMENLALAYEKASRNEQEHGKLWFERYHGILSKDENLRDAIAGETYESEDMYLKFAKTAKDEGFTDIAMLFEHVAKIEEGHKKMFEQYLDGSNTNLDKWQCPKCGYVHKDSKAPKRCPVCEQYRVGGSN >gi|343387846|ref|AEM23336.1| GlpF, Glycerol uptake facilitator-like permease, 3100187..3100951 [Brachyspira intermedia PWS/A] MEVNLMYSKKAEFLAELIGSFFLILLGCGVVASVLIGNNGAPVNIHIAWGLAVMFGAYVSGKISGAHLNPALTLALAVTGRFPWNKVWYYVIAQMIGCFLGAAVVFAVYYAKWIEVDPTLSTTAGVFTTFPAVPGFLPGFIDQVVGTFILVFLILTTGDANNTPAGSNLGYLIVGLIIVVIGMSFGFMHGYAINPARDLGPRLFAVVAGFKNNGLTDGTNIWIVPIIGPIVGAVLGAVLYDFTIGKSLAKDKLQ >gi|343387847|ref|AEM23337.1| glycerol kinase, 3101002..3102486 [Brachyspira intermedia PWS/A] MSKYVVAIDQGTTSSRAIVFDYDQNMVSVAQKEFTQIYPHEGWVEHNAAEIWATQFGVLQEAIQIAGVKPEEIAAIGITNQRETTVVWDKNTGEPIYNAIVWQCRRTAPICDELKQKGLDTYIRENTGLVVDAYFSGTKIKWILDNVPGAREKANKGDLLFGTIDTWLVWKLTGGKVHVTDYTNASRTMIYNIKDLKWDENILRELNIPMSMLPEVKDSSCVYGYAHINGKEVPISGIAGDQQSALFGQAGFNKGDTKNTYGTGSFILMNVGENFILSKNGLITTIGIGYKGKIEYALEGSVFIAGAVIQWVRDELRLLHDAKDTEYFATKVKDTNGVYLVPAFVGLGAPYWDMYARGCLVGITRGVNRSHIIRAAEEAIAYQSKDVIDAMVADSGVKLASLKVDGGACRDNFLMQFQSDIINTKVLRPQITETTALGAAYLAGLAVGFWKDKDEIANRWKLEREFTPSISEEERKKKYMGWKKAVERSRGWAL >gi|343387848|ref|AEM23338.1| Predicted dehydrogenase, 3102673..3104112 [Brachyspira intermedia PWS/A] MYDILIIGAGVSGTSSARELARYKANICVVERGEDVCSGTSKSNSGIVHAGFDAANGSLMAKLNVLGNKMMPKIAKDLDVPFKQNGSLVVCTNEEDMPNLQAIYDRGIKNGVEGLQILNREEVHKKEPNLNDNVCAALYAPTGGIVDPFILNIAYAENAHANGVEFKFDTEVINIKKLDDGTFEVETNNGTIKTKYVVNAAGVYADKFHNMMSKNKIHITPRRGDYILLDKEVDNLVTSTIFALPTKLGKGILVTPTAHGNIMLGPTAIDIEDKEGLNTTAEGLAQIIEKSKMTVKNIPYNKVITSFCGLRPHEDNHEFIIKELEDCEGFFDCAGIESPGLVSSPAIGVMVADIVSKKGNFEKKENFIETRKGITHFNALSNEEKNKLIKENPLYGHIICRCEKVTEGEIVEAIKSPIGAKSIDGVKRRVRAGLGRCQGGFCSPKIIEILARELNVSPLTITKCGKGSEIVIGYDKETF >gi|343387849|ref|AEM23339.1| pyridine nucleotide-disulfide oxidoreductase, 3104177..3105451 [Brachyspira intermedia PWS/A] MESYDVVVIGGGPAGLAAAISAKENGIDNLLMLERDAVLGGILNQCIHNGFGLHRFGEELTGPEYAYRFIEKVVDLNINYKLNTMVLDIVLNNDKTKKIIYINKEEGLVEINAKAVILAMGCRERSRGALNIPGFRPAGIFSAGAAQHLVNIEGYMPGKEVVILGSGDIGLIMARRMTFEGAKVKVVAEILPFSGGLKRNIVQCLDDFGIPLKLSHTVIDIKGKERLEGVTIAKVDENMKPIKGTEEYYSCDTLLLSVGLIPENELSKEIGVQINPITSGAIVNESLETNIDGVFSCGNVLHVHDLVDFVSEEAETAGKSAAAYVLKNKRRDDSNSISLKGSNGVRYTVPSMINTDNVDDHVMVRFRVANIFQNKFLNVYFDGERVIHKKHLIFAPGEMETVKLDKAMLSKEGLKNIEFKIEDN >gi|343387850|ref|AEM23340.1| arginase, 3105489..3106373 [Brachyspira intermedia PWS/A] MSKTIRLIYPQWQGGIISDWIKELNPEDSSRGYYLGAKLLSILAPQNDNHETLEVPVSLDIKNREIKNGIMDYDFIVSQTKNALDILSKNNPDKIITFGGECSVSVVPFTYLNKKYDNDAALIWIDAHPDITLPEDNTYAGYHAMAVSACMGNVDKNISYILPSKISADRILFVGLRDWERDEIKKRQEEYGITHFAPEAISSSSESVIEWLKKSNASKVLIHFDLDVLDPNEIIAAVGVSPNGMKINEAVRIINDIAKEKEIVGFTIAEHMPRIEIMLKNMMADLSLFNELNN >gi|343387851|ref|AEM23341.1| conserved hypothetical protein, 3106415..3106774 [Brachyspira intermedia PWS/A] MEKKELTCICCPMGCALSVELEGSNVLSVSGNTCKRGDTYAKDEVVRPVRMVTSIVKVKNGKLKMLPVKTKEPIDKSKINECLEALKTVEVKAPIHIGDIVVQNAAGVNIVATRNVEAV >gi|343387852|ref|AEM23342.1| conserved hypothetical protein, 3106899..3107636 [Brachyspira intermedia PWS/A] MDKDFKQQFDKVKHLLVPSFDLDKPFRDKKFNDTELDILDIGEVNLSSGKIIACDPLAYMYDDQVSPFIQTVKPNKYKVSLLIIKDEERISIAKISFSDKEPKRYELAVTGEEDLSEVEEGEFFGYPVDAGMGCFCDYDAAKKYFEYENKLEEESGGDFDNRYDDLFSDLLEDNAKKNPKYQSEYGDWLNWNVPESDSNIVLFTSGYGDGYYPSYFAYDENDNICALYTIFIDLNDEEDEDSDDE >gi|343387853|ref|AEM23343.1| NorM, Na+-driven multidrug efflux pump, complement(3108831..3110228) [Brachyspira intermedia PWS/A] MTDKKIELFENYPVHKALITLALPTILGMLVNVFYNMVDTFFVGQTGDPNQVAAVSLCMPIYLLLMAFGNIFGIGGGSYISRKLGARDYESVKKISAFAFYASIIVGFISMAVYLIFMKDILKISGASQNTYQFSKDYLVIVAFGAPFVVNQMAMGQIVRAEGSSKEAMIGMMLGTIVNIVLDPIMILYMNMGVAGAALATIIGNACSTIYYIYHILRKKSFLSIHFKEFTLHKDILINVFSIGIPVSINNILMSASNILINNLAAGYSDNVVAGLGVAQRIFTLVVLVFIGLSQGLQPFVGYNFASKNYKRMNAAIKISCAVSVVIGFLLLGLSLIFGRLAVAVFINNEEVIDYGVKFLVASYSIAPIIGFQFVFMSTFQALGKSIPSLVLSISRQGIAFVPTILIGTKLFGIKGIIWAQPIADIVTVIMASIMYIYIYRKMKRKALEEENNSENNSEPAYANV >gi|343387854|ref|AEM23344.1| transcriptional regulator, CarD family, 3110491..3111066 [Brachyspira intermedia PWS/A] MNTYVVYPMYGICKVVGISDNKVNSNLVECYVLECESENITLKVPINRVKEYRIRKIISKAEADNLLNILQTKPHDIENNWKIRYQENEEKLRSGDIKDTIEVARSLFTRNKLKELSASEKRLYEKAYMFIVNEISIALKKDRDEIEDIVSNALEKSAKKFKTKPLEKEKVVKEKEEKDTSKNGQKKEKRG >gi|343387855|ref|AEM23345.1| hypothetical protein, complement(3111227..3111478) [Brachyspira intermedia PWS/A] MLGMKAIIIPKIKYPSTNRMINFSFNDKVIPTVLIVLIVKSTVINVKKNAIKKPSMILEVFFLINKNSNKNTNTALIMNTVNV >gi|343387856|ref|AEM23346.1| Integral membrane protein (PIN domain superfamily), 3111486..3112148 [Brachyspira intermedia PWS/A] MFKLTKQDKTKTAKILDTSVIVDGRIYDIAEKKFFDGLLILPEFVIKEVQFLSDARDPQKRIRGRRALEILNKMKSSKNILLSITDIDFPNIKEVDLKLIELAKKMDAKVITNDFNLMKVASIHEVDILNINDLANSLHVVVLPGETINIDLIREGKDKQALGYLEDGTMIVVDNAKHLIGKNVEIEIDNVLPKEAGRVIFASLASSKPNNKKRHDNKQN >gi|343387857|ref|AEM23347.1| putative cyclase, 3112155..3112775 [Brachyspira intermedia PWS/A] MIIDLSAEIYNNMPHYPDDIDVKVSAENYEYFNITNISMCVHTATHIDTPLHCIKGKDSAASIDLNYFVGNAYCIDIMPDNDNKINFDDNFNFDIIKECNILLINTYWHKNINTEKHYKNFPYLSESFAYKLIDLKIKTIGIDTPSVDSISNNNLIHNILFSNDICIVENLTNLEKVSHKKFFFSAAPLKIKGSEGSPVRAYAIID >gi|343387858|ref|AEM23348.1| hypothetical protein, complement(3112857..3113471) [Brachyspira intermedia PWS/A] MLIITISTNLMAKSGFGVDLTVPLGAGIGFFYEDGKENKTLKPDGGFEFGVYLRPNYYFDLSVLSLGIALDFGYQRDVFAYKSDINKENLTFDSLSIGLMPKIDILFLSIGVGAGVKFPLGGSSYSKENSGGEHTEKYDLKQLQNNFNNLYIPYLKASLDFLLLYNFTLGIYMSYDFPVMEYKNVAPKVTFGGFDIGGQIGIRF >gi|343387859|ref|AEM23349.1| hypothetical protein, complement(3113785..3114681) [Brachyspira intermedia PWS/A] MRNINRMNDYFVRYLLGSLGNEDILENIVNCVLRDSKFDEVHDLEIINPHNLPENINLKESVLDVKARTKDNKKIIIEIQLSGNIDFVKRIFYYISKNVVSEINENEPYDIISQVISINFVNFNMDFYDEGKPHRCFKLIDTENHSVSLDMMQMHIIEVPRFIKVLNSSDIDDIKKNKILSWIEFFTVKDLDEVKDKLKEVNDIMPKVIDKYERFISSKEEMEVYNARDAFLYGQTIMLKRERDEGKREGIEQGKREGIEQGKKEQQISIAKKLKESGIDIKIISENTDLSIEEIKKL >gi|343387860|ref|AEM23350.1| pyruvate ferredoxin oxireductase, complement(3115015..3115569) [Brachyspira intermedia PWS/A] MSTERIIFAGFGGQGVMSMGQMIAYAGMIENKHVTWCPSYGPEMRGGTANCSVVVSDELVGSPMISHDASAAVIMNLPSLTKFEKDVLPNGILLINSSLIDKKASRDDIKVAYVEANKIAGDIGNPKSANMVMLGALLTLHNIVSFDSVQQAFLKVFGERKKDFLPSNEKALNAGRDAVKDLVS >gi|343387861|ref|AEM23351.1| thiamine pyrophosphate, complement(3115585..3116256) [Brachyspira intermedia PWS/A] MHGTSQRIIAECLEELNVLDRTVGIASVGCSVLAYKYFNCDMQQAAHGRAPAVATGIKRAIHDSVVFTLQGDGDLAAIGTAEIVHAAARGENITVIFLNNAIYGMTGGQMAPTTLEGQRTTTTQAGRDFHRAGKPIRVCEMLATLEGATFVERVALDSPANIRKAKVAVKKAFENQIAGKGFSIVEMLTSCTTNWGIAPTESHKWIREYMIPHYPLGNFRNDA >gi|343387862|ref|AEM23352.1| 2-ketoisovalerate ferredoxin reductase, complement(3116316..3117308) [Brachyspira intermedia PWS/A] MFFGYPITPQNEIPEFMSKAMYESGGSFVQAESEVAAINMVYGAGGAGVRAMTSSSSPGIALKQEGISYLAGAEVPAVILNVMRGGPGLGSIQPSQSDYNMMTKGGGDGDYNCPVLAPANLQEAADMIMEAFDIADHYRTPVYVAADGFIGQMMEPVDIVYKPKYEIKEKTWAACGKRGKREKNNIINSLYLEPELLYEHNLHLQKKYDEIKEKEARAEKYHTDDAELIFVSYGTMSRIVRGVVDKFREEGKKVGMIRPQTLWPFPVKAFDNPNCKMYISVELSMGQMVDDVKLAVECKVPVKFYGKAGGLVPTSHEIIDNVRVLAGGLL >gi|343387863|ref|AEM23353.1| ferredoxin, complement(3117373..3117606) [Brachyspira intermedia PWS/A] MAKGRVTIDREQCKGCSNCISVCPTKILYLDKENMNSWGYYPAAVTDMEKCIGCANCAMMCPDICITVERLDKEEGK >gi|343387864|ref|AEM23354.1| TPR domain-containing protein, 3117862..3120264 [Brachyspira intermedia PWS/A] MNIDDRKNIERLFDLGHDAFISKDYEKSIEYLDEIINIYNKDIIAYSDSEFIIYSDSYDNEDDEEGKNINNEDINTTHDTLVDVYYNRGLSYFNLKKYEEAIKDFDKVIELSPDKSNAYYNRGHSKSYLGQYEEGIKDFKKVLEFNEDDAEAIYYIGLGYFYLGRYEEAIKNFDISLLLDDEIDDAYYYRGHSKRYLNMYEEALSDFNKVIQLRDDDSDSYYSKGLTEFFLGLYEDAINDFDKAIELDGNYSNAYYFRGLTKNSLELYKEAMDDYKKALEYADEDNIISIYNDMGLLEYKLGNYKEAINYYTKIIEINDDIYYSYYNRALAEESLELYEDALADYSRAIELNPEDTYSYNNRGLIKNEMQMYDEALEDYNKAIELEQNDAYLYNNRALLKGRMHLYKEAIEDFDKAISLYSEDAEFYYYRGLTNSYLNELDEALKYINKAIELDSKYINAYNERGLIHYRNTDYKSAIKDFKKVIELDNESVYANYHLALSYDALEEYETALKYYSRVIELDPTTPDPYYNRALAEIEMELYNEAIEDFYKVIEIDNTIMDAYFNIGICYDSLKEHQKAIDCYTKVIEADKSSIDAYYNRGLSKVELKLYNEAFEDYIRALEIDPKYANAYNGIGFSKTKYSNNEFKNGNTQRAIDLLNDALLYYEKGLSLKINDNLNNASIYDSMGYTTTKLANIYLSMKDMDNAYKYYNNALLCFREALKLNSKHALAHNSIAYIYIHLDKMNNKNNIFNEEAYKYFSDAYSFAKKDDKKLIVKCITSLAKENIKTAVDFCVNNNIEF >gi|343387865|ref|AEM23355.1| sodium dicarboxylate symporter family, complement(3121400..3122728) [Brachyspira intermedia PWS/A] MQKKHINFTIRVLSALILGLALGFVLRTVYASNMEIVNQSIVWYNVVGNGYVRLLQMLVMPLIFVSITMALINIKGNSNNLGKMTMIIIAVLMITTAISALVGFLTAKGFGLDASKLQSLVGDISKGASNYEGRLEEFSSRPVPQQLLDIIPTNPFAALAGMGGSPTLSVVFFAALVGSSALGLRKKKPEVFEFFQKIMQSLHDVVMKIVAFVMRLTPFGVLALMAKFMATSDLNAFAQLGQFLLASYISIIIMLIVHSIILMIFGYNPIKYYTKAFTVLTFAFSSRTSAGTLPLTVSALKDKMGISEGVSNLSASLAVTIGQNGCAGIYPAMVVAMIAPTLGINPLEPAFLIKAVIIIAIGSFGIAGVGGGATNAALITLSALGFPVGLVAILLGIEPLIDMGRTMLNVNDGMVTAAVTGKICKEVDMDKFNSSDNTGSNM >gi|343387866|ref|AEM23356.1| peptidase T, complement(3123425..3124651) [Brachyspira intermedia PWS/A] MKTYERFIKYTSFNTTSNSRNENQTPSTEGQRVFAEYLVNELKTMGIDNAYVDDKSFVYASIPASKGKEDKPKLGFIAHLDTNEDAPGENIKTNIIKNYDGKDIVLNKEKNIVLSSIKFDNLNKYIGNDLIVTDGTTLLGADDKAGIAEIMTMAEILMNDKTIEHGEIKIAFTPDEEIGEGIEYFDIEKFNADFSYTIDGGEIGEIEYENFNAASCKITVNGVNVHPGYSKNKMKNAILFAMEFNSMLPAEQKPQYTEKYEGFYHLSYIEGTEEKAELEYIIRDHDLEKFNHKKEFIKDICDFLNKKYGENTFICDIKDSYYNMKEKILPHMHLIDNAKKAFNECGIKDKIRPIRGGTDGARLSFRGLPCPNLSAGGENFHSRFEYIPVQSLEKMTEVILKIVSIYSN >gi|343387867|ref|AEM23357.1| pyruvate ferredoxin oxireductase, complement(3125117..3127381) [Brachyspira intermedia PWS/A] MANKYNLAEQENILESGNELAAIAAAQINYHVMGYYPITPSTQIAEYLDEMKANGRHTVCMIPGDGEHGAAGICYGATTAGGRVFNATSANGLLFAMEQLPVQAGTRFPMVLNVVNRTVSGPLDIKCDQSDIMMALNTGWIIIMAHTTQMVYDFNILALKIAEKAKLPIIVSSDGFFTSHQKKKIYLFKNDKDVQDFLGKYTPEVTSVEPGKNPVTIGPYMNEDELTGSKLQLSQALEDSRAIITEVFEEFASLSGRQYHPIETYNMEGAEVALMLCGSSYETGTLAVDEMRKANPNLKIGAFAITQIRPFPEKELQKLLANVKVVVVGDRQDSYSGMGGNMSTEIRAALKNDVNNKSSVVSRVYGLGGTEFTLEKAKELFDLGLKELANPGSVEKHSYLEQYMGHAGVEMKPIHEPLTLESQKSGITVTMNEQTHKLDVKVPPLRELTGKAYRYAQGHGACNGCGIFSGINTFMKGIEGDVVLLVHTGCSMVVTTGYPYSSYRTTYVHNLFQNGAATLSGVVEMYHERKRRGEIQGPEDPTFIMITGDGGHDIGMGPSIGAAIRNHKMIILEYDNEGYMNTGNQLSFSTPLGHRTSTSNVGKAEVGKQFGHKDVAQIFAGCHIPYIATGCEAYPMDLIKKAAKAQWYANNHGTAFVKLLITCPLNWKSPDDMGKDIIKAAVDCCFFPLYEVEHGITTITQMVADDKKLPVTEWLKMMGKTKHLLKNQEILDKFQKEVDRRWTRIKAMHESPVL >gi|343387868|ref|AEM23358.1| pyruvate oxireductase, complement(3127396..3128364) [Brachyspira intermedia PWS/A] MGANSAGKMLAEVGVLTQGFYGAAFSSYGSEKKGSPVKSFVRFSDTEVRVNSTVEEPHVVAVFHMNLLKNPMTLAGVKEDAIVIFNTNKTPDEARDFAKLHGGKVVCVDAIKIANDLKLPSQAANTIIMGAMVNQLDFIDSAKFEEQIRKQFSGKKPELVEPNVEAFRRGGSDSVVKDFPADGKYPYIPYKKPEPVYGKNNQLTGGYINAAGNSTLKDLQVTRTGNIPVFNPKNCIDCANCEVVCPDLCIVWEKGPDRKDPNKIAMNMMGIDYQYCKGCLKCVRACPKGPYSGKFEKDQQALRIEVEADCNVDELTYSRYKK >gi|343387869|ref|AEM23359.1| methyl-accepting chemotaxis protein McpB, 3128943..3130688 [Brachyspira intermedia PWS/A] MSKKAIDKSSYDGFGTTIKGYSTFFDSLIENQLILSDTYASFSFVINYMEYRNPADESNMLTVLKLIGAKNPYVKSLSLIEADGTILNNSEDNNIDVGKKVADLYPDLWRRYDPVKKPTLADAIYKDKDGKWITAIISPVKSKTDNTYLGGMMIILDWQKVIDEISITAGEVLTHWIRLWVFNKDTLLVMHNVPSEVGKLAPVEIKTIVNNTEGKLEFQNDGMTKVCLYNSLKDQPWKVAFSMPLSFIEQQSTNILKIGILIGVLGIIFSFVIGFLYIKKIISPLKILVEEAEEMSKGEFVLRKFKFKKNEIGDIAYSFKNMRDAMVKIINEVNATSEKINNAAANLTQGSDDLSARTDAQASSLEETASAIEEMASTIKSSAEHSVEGNDMMIASKKAVENGASVIAETTKNIEEVYESSEKIKSITKTIEDIAFQTNILALNASVEAARAGDQGRGFAVVASEVRNLAQNSQSSAKDITLLIENIYEKINKSAETARESQSIFNDIQSKIDGTAKIMQEISTTAVEQQTGVDQVNIAVSKIDGITQQNAALVDETTNYARELLEQSENLKSIMTFFKMD >gi|343387870|ref|AEM23360.1| hypothetical protein, 3130811..3131902 [Brachyspira intermedia PWS/A] MITFITFLLITSLLNAQEKYTNAIMPPLPNAFDMFIGREGNNELPQYIEPDYFRDDYKRKLPNPNDTNLGFFQKYPIEFHLTTTFSYAAHTNTFNLRDTFATIGQTFHNDYIQFTGFITAYGYFDTHNPDIEYPYIKGNAGLYDGGVQAVFIDRILVSARGRATFDINTTTFMLMPHYYDTTLNPAHIDTPDYYIPQVLNGPGIRVGFIGNHYEIAYSQGDFRHSIPKAFLFRFNIPNIEFRFLYEHENRRDPQFYHINLFDSLVQASATFRFPLMNETIWLNAIAEYTWRENDAHYIRLEQGFEWYMLNIALREMVHIKDKNAKLYLEYAIFGKFKAGPAEFNVGFQGSTDGRYYIAGNVTF >gi|343387871|ref|AEM23361.1| hypothetical protein, 3131964..3132383 [Brachyspira intermedia PWS/A] MKKIICTILTLSVLSIYAYGASIALSEVPSKAIAFADKYFADYYLYRATEMGGSYSLIFKGGLKIYVNSNGEWRTVDGGGEEISIAYVEDKVRNAIKKEFPDEKVISIKKNSKNYDIEFKSRRKIAVDLEGNITKKGRW >gi|343387872|ref|AEM23362.1| hypothetical protein, 3132906..3134369 [Brachyspira intermedia PWS/A] MTTLDINEILGYGITEQPTEYNSEYELINWLKYDLLQQALSKCKTKNSNNIIIITDEEEKYYTLNIGIEDYKNNIKNKTIINFYLENILFDFSIKYANVNKVHYNLRLDNLIINNELDFSYNNFFNIFDSNIQFHNIEFENNLWFDHLILNKGIYFSGCYFKDKLCFGSSKINDKLYISNSTFENGISFANNQYINSIEIIDSYLNKELILKNNNIEKIIDINKINIDDNIEEKNYNSKIILDNVVFDNNTSSINLNNIKKVNEININNTFINGRINLKNIEVEEADFKGSVINGGLINPVNFKVHKFANRESALFLKNEAYARNNAIDALKYKAKEIECHKDDLMKLSKDIIQNKEYSFTKKIKELYKIVGDIASIYLSSLYSDNGQNWIKALFMTILITIICFTVFYIPDLTDSNIIRLYYRNLFPELIKYFIPTDYSLIIKYAASKLNLFLKTFGVLVYFLGKVLFWYGSVQTVQAFRKFAKGA >gi|343387873|ref|AEM23363.1| hypothetical protein, complement(3134409..3134585) [Brachyspira intermedia PWS/A] MSDIKKEYDFSKAHRITDFENGKFLINSEDIETPIYLDKKYYLNWKFYPNNQKLIYQK >gi|343387874|ref|AEM23364.1| hypothetical protein, complement(3134578..3134772) [Brachyspira intermedia PWS/A] MKDEEHSDYEDRFITMGNIKGKFIVVVIHTDRTKNSNEEVIRIISARYATKNEINQYYNRGDYE >gi|343387875|ref|AEM23365.1| tRNA (guanine-N1)-methyltransferase, 3135162..3135896 [Brachyspira intermedia PWS/A] MIIDILTLFPKFYESTTSFGVISMALNEKKIDLNIEDMRIYGEGNYKKCDDYPYGGGPGMIMTYNIFKKYFDSHKKGYTIIFSPSGKTLTQQKIKELAYKEHITMILGHYEGIDYRVEEKYADEALSIGDYVLSGGEIPALLLLDAIARYKGVMNNEESVISDTFEENSNGLLEYEQYTRPPEIDDMKVPEILLSGNHKNIDEYRRKRSIIKTFANRADLFSKINLNKKDIETIFEYLKENNNK >gi|343387876|ref|AEM23366.1| acetyltransferase, 3135913..3136404 [Brachyspira intermedia PWS/A] MKIRKTTVNDIDKILEIFDYARKFMAENNNPNQWVDGYPGKSDVELDIKNDSSYVCLDDNGEIIGTFSFAVGEDENYDKIYDGNWLNDKEYGTIHRIAVLGGRKGVASFCLNYCLGICSNIRIDTYKDNIPMLNFLKKEGFKQCGTIILKLNGGKRIAFQKTV >gi|343387877|ref|AEM23367.1| hypothetical protein, complement(3136401..3137327) [Brachyspira intermedia PWS/A] MKNDTVYALDLYNSRMVIASGSNVRYFPLEYKNLETSTISLIDSNSNIYITGYNLRYVGDVVVSNVMMSLPSESPSTEGDDAPQIETYTVKVTNTNYTKVGLVSLNKISPEGNTLYSIDTIIDNEYESLVKLLTLTNHKFAILKRDKDRIPLLDIYDMDSGKMENRYSLKEVEYIDTGKMSYREIVDCVYVPEKEVLAILTMNIVEGKHQEDIIYTSKLDNFKLKESYKIPCRDNSLAVGMSSTGRVTYTGMDNGMYFFIRTNPFLSQNHVKEYLGTDGFNKLRGIHMFDDSVYGFMVENGVIKFHNY >gi|343387878|ref|AEM23368.1| ADP-heptose synthase, complement(3137579..3138586) [Brachyspira intermedia PWS/A] MDLKDKAQKIIDAKVLVIGDLMLDRFTYGDVVRISPEAPVPVLHVNHEENYLGGAGNVARNISALLGNNNNDNIFIIGVIGHDKAADVIIDNMNCSNISSNGLVVDDTRSTITKTRIVAGTQQIVRIDEESTNPFSSNIVKNIEKAFIDNVDNYNVVIISDYAKGIITKQLSKKIIDTCNKKNKPVLVDPAIKHFSFYKKATLMTPNLKEAVEGAESKSPFYEFDEKAIKILGDNIIKKLSLSKLMITLGANGMALFDKEIKLKDKNVPYIIPTKAKSVFDVSGAGDTVISVLAMCLSVGLSFKDSSEIANAAAGVVVGKRGTSTLTLEELIDAL >gi|343387879|ref|AEM23369.1| lipoprotein signal peptidase, 3138797..3139372 [Brachyspira intermedia PWS/A] MIKLNKVIEEIKQKKIYFLIALLIFIADTVSKYFIDKYLQETIIKRVIGDILIFIYTRNYGVSFGFLNNVPETIQHIIPELLKVIVFIAMIVIFFIMLSINVKKQRLSMIGFTMVLGGAMGNLVDRIMRGYVTDFISMGFNETIRFPYNYNIADASITIGICIIAIGVFVFKEDFDKKKNIESDKNNTENN >gi|343387880|ref|AEM23370.1| Pseudouridylate synthase, 3139375..3140364 [Brachyspira intermedia PWS/A] MSIEELENNNSIDTEEIEDDEIDAESTNNKKSFIITKDDIGKRLDTFVSEKLNITRSQVKNYLTSIIVNDAEKKLSYSLKLNDNIIINLDNILKEKTDTENPLPENIDLDILYEDKYLLVINKPAGMSVHCSPSEMSGTLVNALLYKIKDFDFVGNKERAGIIHRLDKDTSGLMIIGKNANIVSSIQEQFKNRTIKKIYHAIVIGVLKDNYMEINLPIGRHHIYRKKMTVRDDGKEALTHIKVLKRFKAHTLIEINLKTGRTHQIRVHSSYKGFPVAGDKIYSKSFNKYSGLMLVAKKIEFMHPITKETLDFEIDYPDYFADFLYSDNI >gi|343387881|ref|AEM23371.1| putative leucine rich repeat protein, 3140446..3141051 [Brachyspira intermedia PWS/A] MTMTDNDFNKLIKWAKKNDAYNIISMTKKQITSAKELNLSNLDIERVSLEICKLTNIEKLYLSLNYIEKIPKQIKNLKKLKVLDISANNIKVIPKEIFDLTMLEYLNISNNYIDEIDNDIEKLINLKELDISSCNISSLPEGIFKLYNIEFLDISSNKIKKIDSKIKNLENLEELIIDSNKLKRIPKEINNLKKLKILSIF >gi|343387882|ref|AEM23372.1| pseudouridine synthase, complement(3141502..3142551) [Brachyspira intermedia PWS/A] MKKQQNEEAVRLVKVILESGFASRRNCEKAIMSGRVRVNNQVILDPAYRVKEDDSVSIDRELIKRQTKRYMALYKPIGVVSTTKYLPGRRIITEFFKGIKERLFYAGRLDSESRGIMIITNDGEFANIITHPSYEILKVYDVTVNGKIDSEALLNASKGITIKNVSYSPFKFKILSKGRIQSKIRLTINEGKNREIRKIFDHLGYKVIDLERISVGCVSKYDEVSGTLEAGHIRDLTKKEIDFFFKQKDKKLKDIESIFENIPDDIEDENYEDSISNDKEENKKVHDKSKWAKAKPKKKRLVTKKSSTFKGKIQKKNTKSEFSENRKDKKLIGKKITIENQLIKKVLGK >gi|343387883|ref|AEM23373.1| DNA polymerase III, gamma and tau subunits, complement(3143225..3144802) [Brachyspira intermedia PWS/A] MAENYKVIARKYRPQTFEEVIGQEHITKTISKSIAQKKIAHAYLFSGAHGVGKTSLARIIAKALNCVNGPTDKPCGVCPSCTQIENGTPLDVIEIDGASNRGIENIRTIIENVRISPVAGKYKVYIIDEVHQITNEAFNALLKTLEEPPAHVVFILATTEAERVLPTIRSRCQQYTFKSLGIEDLEKILKGILDKENIKYDEEAIFLIAKQARGSVRDSETILEKMIAYTTDKKYITSADVNAVVGGNNFSFVKEFFDIMISGDKKTYFEFVKKLFEESVDPRTFINSIIEYIRVVLMIKSGIDDIKLLEITENERDDLKVFANHYSDDEIERILDYILSTEERIRSASNTRTIFEMRMLLLLNTDNLIRPVDIISSNMQAAVSVNEDYGFESLSNNNNTSNNNTPAVNQPKPQYDVPLSPNDKRRIFYNKILSFIESESPTIYSLLSQGNPIESKGAVLIVALPDHIYDMTQTDKRINDLVAKAIPHFTKNKDVAIQFQKAVEGNMIDKLKSKLQATEVDESSL >gi|343387884|ref|AEM23374.1| Na+-dependent transporters of the SNF family, complement(3144961..3146283) [Brachyspira intermedia PWS/A] MSYMKKERGNFSGSIGFIIACIGSAVGIGNVWMFSWRVGQFGGAIFIILYFFFVIALGVIGLIGEFTLGRMNRTGPIGSFENALKTRNKNFGGIIGIIPMIGSLGIAIGYSVVVGWILRYTAGAIDGSLFSSSDIGLYFVSLVTDFGSIPWHIMGIVICVLILIGGVSKGIELTNMFLIPLFYILFIILLVRVLTLPNIKEGIDYLLFPDWQILSNPKAWAMALGQAFFSLSLAGSGMVVYGSYLKDDINIPKAAVQTAIFSSLGALLCAFVVIPAVFAFGINPNAGPPLVFISIPLVFQKMPFGYFFSILFNISILFAAISSLINLMECPIEALENRLKLSRKAAVITIGIIMISVGIFIERADRVGAWMDFVSIYIVPTGAMLSGIMTFWIFGMKTFRENVEKGMNKPLPKWFDFMSKYVFVGVSVLILILSITLGGF >gi|343387885|ref|AEM23375.1| tryptophanase, complement(3146296..3147639) [Brachyspira intermedia PWS/A] MVEPIRMISREEREEKIKEANYNVFALKAEDVYIDLLTDSGTGAMSDKQWSGIMMGDESYSGSRSYFHLMDVAKSIFGYKYFQPVHQGRAAEKVLLPNIIKKGQYSISNMHFDTTRGHVELAGGIVVDCVCKEALDTENYFDFKGNMDVERLEKLIKEYKPENVGIIIMTITNNTAGGQPVSIQNIKETSEIAKKYNIPLIIDAARYAENSYFVKKREKGYENKSIREIVKETFQYADGFTMSAKKDAIVNMGGLIGIKENEALFEKVKISTIPNEGFVSYGGLSGRDLEGLAIGLDEGLDFDYLNYRIGQIEYLGDILREAKVPFQYPVGGHALFVDAKKMLPHIPYYEFPGQALAIELYREAGIRGCDIGSYMIGNDPKTGKQIEAELELTRLAIPRRVYTQAHMDVVAEALISIRDRASSIKGYRITWEPPILRHFTSKLEPLS >gi|343387886|ref|AEM23376.1| V-type ATP synthase subunit K, complement(3147888..3148355) [Brachyspira intermedia PWS/A] MGFTMNTALLLGYLGAGLMVGMSGIGSAVGTSISAMTTVGALKKNKDAFGSCLVLSALPGTQGLYGFAAFFIMQPYLTADISIFQGAAILGAGIAVGLACMVSAIFQGKVCANGVEAIGNGYDVFGNTIIVAVFPELYAIVSFATAFLISGVLGA >gi|343387887|ref|AEM23377.1| putative V-type ATP synthase subunit I, complement(3148412..3150211) [Brachyspira intermedia PWS/A] MASLGLVHIEIANGVSSENIENISSKKNDALRAKNIINNALADAKKAKKDVSNVKADNLSKKANEVIENVISTSQASDKLKAERDMLKKELSVIAPFGDFSFDKVNGLKEKTGYNILFYSANAKEYNDYNFSEVKDIFTYSIKEEAGKVYFVAFKKDGSEETIPFDIVNMPSLSYSEINEKIAKLDKEIENNDTEIIKNQVFIEAINKEIDNLNISNHFEEAKESFVASEGTEGKILYVEAYVPKDKESEVKSLFDSKKIAYIMEDPSRDDRVPVELKNNKYSGAYELITKLFQLPNYFEIDLTPMIAVFYPLFFAYCFGDSGYGIVLTIVALIGLFTVLKGQLRGVGILALTLGICTTIMGVINGGSFFGVSIPSNTQIPLFATLSKYLIITDLKENWFLTPFNTALLIGVLHICFALLVGVIDRIKTSPIGDILGAIGKLLFIPGLVLWFLGDMQKMEVIKQFSTVYYALIAVGLVFLVILSNVGKKPDVLNSILGVYFAATGIMGDTLSYIRLFALGASGSILALVINQIGMSFKAIPGVGVVIMVVFLVVGHIAIFLLNILGALVHPLRLTFVEFYNNVGFEGGGKEYKPLKKAA >gi|343387888|ref|AEM23378.1| V-type ATP synthase subunit D, complement(3150277..3150876) [Brachyspira intermedia PWS/A] MALKFQYNKTALQNLRRQLSIREKALPTLKSKEAALRLEVRKITAEIELLKEEYQKLVKENQNYNGFWTEFPEIVKIKKINSELKNIAGVKVNILSNIDFAIENVSLFNMPSWIRLAISMFERLMTIQVKIEMTEARLNALAYARKKTTQKVNLYEKVQIPEYKTAIIKIKRYMEDEDNLSKSSQKIVKERNRAKEASL >gi|343387889|ref|AEM23379.1| V-type ATP synthase subunit B, complement(3150901..3152226) [Brachyspira intermedia PWS/A] MPKAFQKVYTKLVQITKATVSLRAENVGNDEMALVAGRPAQVVKMIGDIVTLQVFQGTEGIPTNAEVVFLGRPPRLKVSELLAGRFFNAYGEPIDGGAEIEGKEVEIGGPSVNPVRRKQPSELIATGIAGIDLNNTLVTGQKIPFFADPDQPYNAVLAQVALRAEADKIILGGMGLSNDDYLSFKNTFTEAGALDKIICFINTTDDPPVERLLIPDMACTAAEYFAVEHKQKVLVLLTDMTLYADALAIVSNKMDQIPSKDSMPGSLYSDLAKIYEKAAQFPDGGSITIIAVTTLNEGDITHAVPDNTGYITEGQLYLRRDSDIGKTIIDPFRSLSRLKQLVIGKKTREDHPAVMNTLVRLYSDAANAKMKKENGFDLTEYDERCLKYAAEYSERLLAIDINIKIDEMLETGWELMGKYFSKAEVGVKESLVEKYGKWTNN >gi|343387890|ref|AEM23380.1| V-type ATP synthase subunit A, complement(3152219..3153982) [Brachyspira intermedia PWS/A] MTKGKVTAIISNLISIEVDGPVSQNEICYVSCGNAKLMAEVIKISGTSASAQVFESTRGVKLGDAVEFTGSMLEIELGPGLLGKNFDGLQNDLDKLQGVFLERGKYNDLSEDKESTYDFTPIAKVGEEVQAGDWIGAVKEGWIDHKIMVPFKFEGKGVVESVASAGTYHLQDTLAVIKSANGEKVNVTMIQTWPVKLTIKAYKEKPRPFKLLETGVRTIDTFNPITEGGTGFIPGPFGAGKTVLQHALATNANADLIIMTACGERANEVVEIFTEFPELIDPRTGRSLMERTTIICNTSNMPVAAREASVYVGMTIAEYYRSMGLKVLLLADSTSRWAQALREMSNRLEELPGPDAFPIDLPAIISSFYARAGFVYLNNGETGSITFIGTVSPAGGNLKEPVTESTRKAARCFYALSQKRADSKRYPAVDPLDSYSKYIEYPEFIEFSDINIEKGWADKVTKAKDIARRGQEANDQISILGDDAVPLEYHQRLWKAELIDFVILQQDAFDKVDKNCPIERQKELLNQVMKVVEADYRFDDYSEVGTYFKRLINAFKQMNYSVYQSDDHKKYTAEMESIFAERSITHA >gi|343387891|ref|AEM23381.1| hypothetical protein, complement(3154011..3154847) [Brachyspira intermedia PWS/A] MGSYYYLISGLPEVKLSDAKAKYDINEITQSILSSLSAKDSKFFKYLIYQNDNKNLVSAIAKQKGLFTPYIEHIEPSIFGKEEMQKYSSISNLPLYMSKFLEDNKNIEWENARHIENTLLNLYYEEMIQSGNSFIKNYALFMRDMKNVLAALNGRALGFSSDEIAKELIGDYSLISALTKSTASDFGVGREIPYINTIVETFNSSDKADPYNMENIECSLVREFLDKLTSIKSFTTDNVFAYYINLTYAVSINGRNEEEGKKHLETLIGSLKEKASAM >gi|343387892|ref|AEM23382.1| V-type ATP synthase subunit E, complement(3154859..3155473) [Brachyspira intermedia PWS/A] MAEEKKLDSLLERIYQDGVEKSNKKADEIISNAKSEADRIIKEAEAKSEEIIKEAERKSEELKKNTITDVRMAGEQSISALKQRIKDLVTAKVLEDGLKGAFADTSFLKDLILEVVKKWDIASSNSDVTVYFPESKKADIDASFEKSIKSAINNATINFDKKLSNGFKIVPEGGNYQLQFTDEDFVEFFSDYIKAKTEEVIFTK >gi|343387893|ref|AEM23383.1| hypoxanthine-guanine phosphoribosyltransferase, complement(3156099..3156629) [Brachyspira intermedia PWS/A] MRKDEHISKVLISEEDINKKVKELAEQISNDLKDKENIPCIIGLLKGSFIFIADLSRHIDVPVEIDFMIVSSYGNNKIGSEIKILKDVDIPLTGRDVIIVEDIIDTGYTLEKICEVLKTRNIASLKICTLLNKPSRRKVDIKIDYNGFDIEDEFVVGYGIDYAQKYRNLPYIGVVE >gi|343387894|ref|AEM23384.1| electron transfer flavoprotein alpha subunit, complement(3156871..3157890) [Brachyspira intermedia PWS/A] MNLSDYKGILVFAEQRDGVIQNVGLELIGEAKKLAAKLNVSVTAALVGHEIEGLAQTLVEYGADKVVVVDNELLKQYDTEAYAQALTAIINAKKPEIVLLGATTLGRDLAPRVSSRISTGLTADCTKLDIDDETKVFGMTRPAFGGNLMATIVCPDHRPQMATVRPGVMQKLAKEEGKKGEVEVLPLTIDTSKMKVKILDVVKETTKKVDITEAKILVSGGRGVGSKENFKNLEAVASKIGAIVSGSRAAVDAGYIEQARQVGQTGKTVRPNIYFACGISGAIQHMAGMEESEYIIAINKDKDAPMFGIADLGIVGDVNKVLPLLAEELAKAIEAKKAN >gi|343387895|ref|AEM23385.1| electron transfer flavoprotein beta subunit, complement(3157926..3158711) [Brachyspira intermedia PWS/A] MKIVVCIKQVPDTTEIKLDPVKGTLIRDGVPSIMNPDDKAGLEEALKLKDKYGAHVTVITMGPPQAEAILREAYAMGADRAILITDRKFGGADTLATSNTLAAALRTLEYDIIISGRQAIDGDTAQVGPQTAEHLQIPQISYAKEIQYNEADKSLTVKRVIEDGYYLLNVQLPALITVLSEANSPRYMRVKGIVEAYDKEIEIWSSETIKIDPSLIGLTGSPTKVKKSFTKGAKQAGKVFEVDTKEAVNIIIEKLKEKFVI >gi|343387896|ref|AEM23386.1| acyl-CoA dehydrogenase, complement(3158750..3159895) [Brachyspira intermedia PWS/A] MEFNLPKTHELFRQMIREFAEKEVKPLATEIDEEERFPVETVKKMAEIGLMGIPIPKEYGGAGGDNLMYAMAVEELSRVCGTTGVILSAHTSLGTWPILQFGTDAQKQKYVPKLASGEWLGAFGLTEPNAGTDAAGQQTVAVLDEATQEWVLNGSKIFITNSGYANVYVIFAMTDKSKGLKGISAFIVESTTPGFSVGKKEKKLGIRGSATCELIFENARIPKDNLLGELGKGFKIAMMTLDGGRIGIASQALGIAQGALDETVAYVKERKQFGRTIANFQNTQFQLANLEVKVEAARLLVYKAAWRESNHLPYSVDAARAKLFAAETAMEVTTKAVQLHGGYGYTREYPVERMMRDAKITEIYEGTSEVQRMVIAGNLLK >gi|343387897|ref|AEM23387.1| dehydratase, complement(3159958..3160362) [Brachyspira intermedia PWS/A] MKFEELKVGMKAEVAKTITETDVILYAGITLDTNPAHLNEVHAQQTMFKHRIAHGMLTAGLVSAVLGTKLPGEGSIYMGQELKFTAPVYFGDTITATAEIIELIPEKNRVILSTTCTNQEGKVVLSGKATIMKK >gi|343387898|ref|AEM23388.1| propionate permease, complement(3160479..3161867) [Brachyspira intermedia PWS/A] MAFGTIGIILSLILLMYLAYRGFSVLIIAPILACFAAIMSGIDSGSIHILATYTETFMSSLAGYVRSYFPIFLLGAIFGKVMDDTGSAKSISYFICEKFGKEKAILAIVLACAVLTYGGVSLFVVSFAIYPVAAALFREAGIPKRFIPGAIACGAFTFTMTALPGTPQIQNAIPMQYFGTDAYAAPILGIIGSIIMGASGILWLQRRAKKAMAKGEGYGVHQNEPTVTNEEKKVPPFGIAILPILLVLVVGLITSKFVFPSLDLSYLESYGTSAGKVVGNWSLIVALVISIIVAILVNLKRMDNVTKTLTDGVSGSFLAVMNTASEVGYGNVIASMAAFAVVKGALLGLSSNPLVSEAVSVSALAGITGSASGGLSIALEALADTYLRDALAANIDPQVLHRIASMACGGLDTMPHNGAVITVLAVTGMTHRESYGDIAMCTAIIPVITVAICIVLASFGVV >gi|343387899|ref|AEM23389.1| coenzyme A transferase, complement(3161896..3163455) [Brachyspira intermedia PWS/A] MDKGKFIKASQVPELIKDNSFVGLCGFVGIGSAEEILTSVEKSFLEKGSPNNLSVIFAAGIGDSKGRGAGHLAHKGLVKRVVAGHWGLAPKLGELANNNEIEAYNLPQGVISQMFREMAAGKPGILSHVGLGTFVDPELQGGKLNSVTTEDIVERCKFSGQDLLFYHAPKLDYAILRGTSADEDGNISFEEEALTLEALSVATAAKNNGGKVFVQVKRKVKRGSIPPKEVKIPGILVDYVVIAETPENHMQTFGEYFNEGYVKNNFVVEGSLKEVKLDERKIISRRCAMLLDKSKKILNYGIGMPEVIAMVVNEEGQEQYFTPTVEPGAIGGTPMGGLSFGATFNATAIVDQPYQFDFYDGGGLDMAFLGLAQCDQYGNINVSKFGPKIAGCGGFINITQNAKEVVFLGTFTTGGLKIGVENGELRILQEGKVKKFVKDVEQVTFSGNIANKNNKKVTYVTERAVFTLVKEGLKLVEIAPGVDLQKDILDQMEFKPIVADDLKKMDSKIFIDEKMGLVF >gi|343387900|ref|AEM23390.1| predicted nucleotide-binding domain PINc family, complement(3164222..3164770) [Brachyspira intermedia PWS/A] MHKTNNSYNKNNSKNNKNKIDVKKLFSDIGTVANVLGKILTTSKSVVDELQNQNGILYVFDTNALMNDPNLISIPKRNSSYIVPIVVLEELDKLKLDKNRSQKASNAIRTINKSNVRIEKYSEHALPKDFDMRNNDNKILATAMKFSNKNVVIVTDDNNLKNKAKSQNIKYMSSSEFKRSKN >gi|343387901|ref|AEM23391.1| polysaccharide biosynthesis protein, 3165330..3166778 [Brachyspira intermedia PWS/A] MNKKNIVILGAGNAGETLASEILTSDDSNEYNILCFLDDDENKKQVNIENHSIDVKGKIKDIENTIEYYKNHSIEIEEIIIAIPTLKQKELLEILDIIYPTGIRYKILPCFFEIIKGNASIKDIRNIEPSDLLGREEIGFDEKEISAYYQDKTILVTGGGGSIGSELVRQLITLPVKKVMALDNSESAIHSLIMSINDRKNEKNKHKFQYIISNVRDYVKVDKILKEENPDIIFHAAAHKHLPFMEAYPEEAIKNNILATENIATLAIKNNIKNFVFISTDKAVRPTSLMGASKRICERMIMSLSHEQNSTAFKITRFGNVLGSSGSVIPVFEKQIREGKPLTVTHPEMVRFFMSIREAARLVIKACTLNDGIIFTLDMGKPVKILDLAKNMLKMYGLTEKDIPIIFTGIREGEKLYEEILMDDETLIPSQYKKLFIAKDPVKCLTPEERKVMIDAFDIASLDADKETIKMLMRKYIEEYTG >gi|343387902|ref|AEM23392.1| sn-glycerol-3-phosphate dehydrogenase subunit A, complement(3167032..3167511) [Brachyspira intermedia PWS/A] MLYFTNSEAEYVVGEKQADFIREVHGISDHGGCGIIKFKSGAIGFIKAVSTSPFKYMLEMDIMGENGRIRLYNNGNSFELYQYKQVDNNEAGSGYESLILTKQYNRDYQNERMLDAVHNIIECLENGGQPISNASTALESVKIIEGIKLSSDTKSKIDF >gi|343387903|ref|AEM23393.1| hypothetical protein, complement(3167598..3168047) [Brachyspira intermedia PWS/A] MYKVGIIGLGQIAYFIDKDPNRKIIWSHIKAYQNTENTKITAICGNSNLDLVKQIQKDENIEKGYIDYNKMLEENDFDIVSICTPIEFHYDIAKKCIETGVKAIFCEKTLSYSIEEAKSILELSKKHNTVFAVNYILRWDNINKQIKNS >gi|343387904|ref|AEM23394.1| hypothetical protein, 3168221..3168625 [Brachyspira intermedia PWS/A] MNIKIIKVIILAAGILLILGAIAGFVSIFIASKKYVHTVCIVEEYNSKKVYKSRKLRYENTMLISYETERYGTLYTTLKSYYPFRKVGDELALWFDPNKPRNIKLPFSEGCIWISLIVSGLICIYVGTFFDSKN >gi|343387905|ref|AEM23395.1| GTP-binding protein LepA, complement(3169017..3170828) [Brachyspira intermedia PWS/A] MSYAEKIRNFCIIAHVDHGKSTLADRIIEHTKAVSSREMKAQILDSMDIERERGITIKSQAVKLSYQAKDGEVYTLNLIDTPGHVDFNYEVSRSLAACEGAILVVDAAQGVEAQTISNFYLAFENNLEIVPVINKIDLPAANIELCKEQMEKEFGVNKDDIVLASAKNDIGIDEILEAVVKMIPAPKDNTNKKTRALIFDSYYDPFRGAVMIVRIFDGSIKKDDKLLLMETKAKYEVEECGTLLLGLKSANGLKSGEVGYIIAGIKNISDIKIGDTITLEEDPSDEPLIGYKEVLPMVFAGIFPAEDEDYTNLQKALEKLKLNDASLVYEPERSIALGFGYRCGFLGLLHLEIVQERLEREFNLNLVITSPSVEVKLKLTNGEEKLIDNPADFPSGQYIEKCYEPFINALIIVPTDYLGNIISLCIDRRGTQTSLTYLDDKRAEIKFDLPLIEVVYDFYDKLKSISRGYASFDYDFSDFRESQIEKIDILVHGEVVDALSFMSHRSNAETRGRQIIEKLKHLIPKHMFQIPLQAAIGGRIIARENISALRKNVTAKCYGGDITRKRKLLEKQKEGKKRMKAIGNVEIPQDAFISVLKTDDNTK >gi|343387906|ref|AEM23396.1| amino acid-binding protein, 3171033..3171809 [Brachyspira intermedia PWS/A] MKNIIIFILLIFIIACNNSSNTNISENSNETTSITNNIYSNKTLKVGIYLYDYPMLYVSNDNINGFDYDIINAIANEENLKLKFIPIQFSELIPALQTNYIDLIIAGMSITEERKQLVNFSDKYCSSGQGIILNKENDEIKVNDDLIGKTVGVIKGTISDNIISEVDGVNVERFDVASSALLSLKVNKIDAVMLDTITCEDYVKFDNTIKLAENISFKLMDYAIAVRKDDDVLLQTINRGLHTIMSNGTYQKLVDKHL >gi|343387907|ref|AEM23397.1| amino acid-binding protein, 3171912..3172679 [Brachyspira intermedia PWS/A] MKKIILTISMILSLLISCKDSSENMSVQQNISTDEYINVGIYVYDYPFGYLSNGNIGGFDYDLMNEISKISGSNIHFIPMRFEELIPSLESKKIDAIIAGMTVTEERKQYLNFSDKYYTSSQAVLIRMDDESIQTEEDLIGKKVGVIRDTVADTMISAKEGIDIERFDTGSSIILSLKVGNVDAAIFDRSTCEHYISYDKSIKLAENIKYPEEDYAIAFRKDENVLLDEVNKALSQIMTNGAYEKLVEKHLGTNQ >gi|343387908|ref|AEM23398.1| PTS system, IIa component, 3172805..3173248 [Brachyspira intermedia PWS/A] MGGLIMKPNLILMSHGNLASTLIESAKMILGDLPKDDYDVIHLHTDNTFAQIENQLKRLLDKFGNNQILIMTDLYGGTPFNIASKFYRKNDNICLISGMNLDMVIEYFSSDLDYNISKFIDEIISVSKDSIALYTKNEPEIYADIDI >gi|343387909|ref|AEM23399.1| MgtC family protein, 3173313..3174092 [Brachyspira intermedia PWS/A] MFVEYIKHALGDFSILEITTRILVAYIMGIFIGWEREQHKKPIGSRTTSIVCMGAALLSCYEDVFARAVILENAELIKSGAEALSKVPDYNRISAQIVSGIGFLGAGMIIQNRGKLHGITTAAIVWVTACIGIVIGSGQWVLSTIGCICIFLSTSIYRFFIPYYISNKKRSIVYLIEHPTKIDFETELGEYGIRFINLEIVGWKENKENNNTPNIISKIRIFVPQLDYKNIENIFRSLNVKPLKKLRNMIEKIDFDSIE >gi|343387910|ref|AEM23400.1| hypothetical protein, 3174102..3174950 [Brachyspira intermedia PWS/A] MNISVYIENLKIDDYHVKEKEIKISPVTIFSKKDIHMTNLIWYINNFHFFDFYKINDYELLSISKIISAIMENYKYNGSIDNDMILECINFLNDILEFSKKEILLKIFKGHSNTNIDKLYLKLNYNAEININSFFESDNIINIIFTYNKKSFSSKVFFSRKIDIFFMVLENIFKILINNNILNTLYIYDFTNIDLVNADKKNMPEMDFIFKLNEISQKENIQNINNKLDLIKTFMKYYNHNIMIEYFEDKELSNIISNNINRRNFLLVSDNAEDLNSLVSKI >gi|343387911|ref|AEM23401.1| hypothetical protein, complement(3175084..3175473) [Brachyspira intermedia PWS/A] MNKKLFSILFTLFLVGILFVSCSNKDKTGSDSSSNSNGKVDTTYEGNWYTDDQAQSPTMIIDANGNISFTNMETGDVPDKKVEGSGNSYTVTYSKGPGTDMVYEVTFKDSNNATYKINNGSAINLIKRQ >gi|343387912|ref|AEM23402.1| chromosome partition protein SmC, 3175989..3178826 [Brachyspira intermedia PWS/A] MHGFKSFAIETNIEFNEGVTVVLGPNGIGKSNIVEAFLWVMGEQSASRLRIDSAKGLESVIFHGTDTRKPSSLAQVALTLDNKSRWIKKYDLDEVIVTRKYYRKGLSEYYINDEQVRLKDIVDMFLDTGLGKNAYSVIKQGTVSEIAKQKPEERRSIIENAAGISKYLERRREAAKKLEESERNLDNVKIEIKNAEKHYKSLKEQAARTEKYYNLKDEQKKINISLNVNQVKKLKITLEDQNKSLEEHTNKKSELEKELQDLDKQKQQELLKFEETRTLSIELDKQVSLIITELTHIEKMSNQLKNQLDNAGKEKDETISRKNSLLKRIEEDKAQIAELEEAVKTIAENIEKSLKEQEAEETNIANEQNKIASLNDQISTLTNENQSATLKIADARERQLEVINKIITEIDEKKKDVMGNSFYQNIGKHETDIDIGFNNLLNAINIKMNTIKEFEEDGVLSNLNELSYNSLCSFIRNLGESLDTEKKDALFLQGIFKEYTKIKDPFVDLLFDKEGTYMQKEAIDKEISDLESFIKTNIEKIEEINNEIKIATDNINKSNANLTTLTIERAKYETNKKASEDRKEMILKSMKMIEDEFGSLNEKINRLEEEYKKLNEEYKENSINYKELEKKKSKTESESRHKANEIKKAESALSNFETSLAKRVKKLNEINENITRVGERINQSNDKIKDIYSHFYENYALNLKDFEENTQNLIDEESYKNKLNTINERIKNLGHINEMALDEYQEAKNRFEFLTKQKEDLEKSKEEILKIIADANKKAGEDFLKTFNEINKKFSETFKILFGGGNAGLKIQNEEDLLNSPIDIFAQPPGKRMENIVSYSGGELTMTGLALVFAIFLYRPSPFCILDEVDAALDGANIIRYKNMVKNLSDKTQFLIITHDEVSATIADAYYGITAEEKGVSKIFTVKVDKEGKVNGSEEKLVNQE >gi|343387913|ref|AEM23403.1| hypothetical protein, 3179309..3179545 [Brachyspira intermedia PWS/A] MESLINYIKKFPYLFGILIGLIFILAAIFKWNGLLNNNSSNFMIGIYEMFGEIGVRILTGILGTVIIISSVIILIIRK >gi|343387914|ref|AEM23404.1| hypothetical protein, 3179542..3180249 [Brachyspira intermedia PWS/A] MNIEKHLFDDTNFFPNKMQILILGTFPVPLYSNVEKFDKLSREEQNNAWYYSSKRSEFWKIIADCFDIDYKNDFLFNKIKKKKLFEENKIGIADVFSKCKRKNENSARDTDLIILEHNNILKNLITDENNYRDLKLIIFTSRFTENHFLKIINDIEYNIEESKEVYEYYNNGINEKGISIDIINALRERYLYVNASRKIKLSTITLKISPIKGVSLYSTKKELYKYYLNNSKNKS >gi|343387915|ref|AEM23405.1| ankyrin repeat-containing protein, 3180384..3181430 [Brachyspira intermedia PWS/A] MPNTGRLDQLLDYANAGDTNGIKRLISQGPISSFIDFGDNQGHNALITAASKGYKDIVLLLLSQNANVNLTCIHGKTALTYAADAGYVDIVSYLLAKNANPNIKINGGTTALLQAAGKGYYSIVEMIVNANADLRMMGTYRSGNDDGINYNMTPLMVASYNNHDLIVRLLLDKGSDINYVNEYGANALFYAIARGNNDIAKLLLERGADANIVASYGPYGNITPLALASTLGLTDIISSLLIGKSDINFKMRDGRTALIWAAIAGKSEAVNSLIMNKANLNIADNDGKTALMFAAENGDYASVEYLINAGAYLNTLDKFKKTALMYAMENGNTEVIDLLTRASLTYNK >gi|343387916|ref|AEM23406.1| CoA-binding domain protein, complement(3181498..3182163) [Brachyspira intermedia PWS/A] MISRTQIMRLLKYKNALRRMKSFGFIKAYSNNLGDAIGITSVQVRKDFSLFNISGNKKGGYNIDDLLEQIDSILGKQISHNIILVGYGKIGKALVNYRGFESESIRIVAAFDHNPEKIDRNASTPILPIEEVKDFIINNKIEVAILTVPDLEAQRMFDVICNAGIKGVLNFAPIKLLERPDCIINDVNIADEIESLFYFINDVKDTSSSSKKHKEKADKNN >gi|343387917|ref|AEM23407.1| D-dependent deacetylase, 3182424..3183155 [Brachyspira intermedia PWS/A] MIDYKLIAQTIKESKYAVAFTGAGISVESGVPPFRGENGLWEKHGSQFAEISYFVKHQKESWKSLKKVFYDPITDVKPNKAHIVLANLEKMGIMRSVITQNIDNLHQEAGSKIVYELHGTAQYAVCMKCKTRYKINKEILAMDPPSCEKCGSTLKPDFVFFGEQLPAIDFNSSIEDAQKSDLFIIVGTGGEVMPAAQIPHIAKRAGARIMEINPQPSNFTNNIVDIYIQEKAGVAFEEIEKYL >gi|343387918|ref|AEM23408.1| hemerythrin, complement(3183216..3183689) [Brachyspira intermedia PWS/A] MEEMVEITVRKGWIKWEERFKTGYKRIDNQHKELVNIINDLYETGVKGDIGDEEVQKAFKEIVKRTIDYATYHFAYEEKIMSAINYSAAKDHISKHRSFSLKIVDEVNSYERGDDLVIKDFITFLKDWLLNHIVLEDKKFIAEVKTTLAKMYEEEMN >gi|343387919|ref|AEM23409.1| hemerythrin, complement(3183700..3184143) [Brachyspira intermedia PWS/A] MSDKYIVWEDKYKVGYKRIDDQHLELIEIINDLHDCMDNRDSEDEELKAEFKKALRKTVDYVAFHFSYEEKIMHVIKYDKLIEHSSYHKEFTNTIYNYVKSYENGSLDAINNLVQYLKDWFLNHILVTDKKFIKEVKEALEKLSKEE >gi|343387920|ref|AEM23410.1| Phosphopyruvate hydratase, complement(3185047..3186342) [Brachyspira intermedia PWS/A] MSLIDNIVAREILDSRGNPTVEVDVWLDSGVMGRAAVPSGASTGEHEAVELRDGDKSRYLGKGVQKAVENVNEIICNELIDMDALDQVEIDRTMIELDGTENKGKLGANAILGVSLAVAKAAAEELGMPLYRYIGGTNAKTLPVPMANILNGGAHSSAPIDFQEYMVMPVGAPTFKEGIRYVAEVFHNLKAILHDRGLSTTVGDEGGFAPTLKDNEEPLQVIMQAIEKAGYKPGDDIMIAMDPASSEFYNKDKKKYVFHKSDNRELTPAEMVDFYVDLCNKYPIISIEDGVAEDDWEGWKILTDKLGKKVQLVGDDLFVTNVKRLQMGLDKGVANSILIKVNQIGTLTETLDSIELAKTHNYTAVVSHRSGETEDATIADIVVATNAGQIKTGSASRSDRIAKYNQLLRIEEELGNRAVYLGKKAFYNVIK >gi|343387921|ref|AEM23411.1| hypothetical protein, 3186597..3186950 [Brachyspira intermedia PWS/A] MFDEDTKGNRLTNETLNFILVKREDTNSFNKLTYISGTINNKSGNQIIKTIEEAKYIEDIKNTNNVKDLKFDNTKMTINYSKDKILFTDIDGKKYTLPLNNSENTWFYKLLNNSTNL >gi|343387922|ref|AEM23412.1| hypothetical protein, 3187086..3187406 [Brachyspira intermedia PWS/A] MREGYHADYTIESLFEIDKFFKEKMNLVLERDDNRNFIFSISAYIGEVIRKKFNGHWELSRDIDLDDETIGIGFKNHKTIYPLNITLELIQKKYTMKEYLKDNFGI >gi|343387923|ref|AEM23413.1| putative Phosphotransferase system mannitol/fructose-specific IIA domain protein, 3187458..3187946 [Brachyspira intermedia PWS/A] MISLNDVEKYINNSYVILDLKADNKEEAISEMLIYSEANGLRINIAQIIESMYKKEDIISSGLGYGVAFPHVRTNQVEDNDIIFAVSKKGLNYSALDKKPVHLLTMFLTNKNSNEKYLGLLSLFTKISRMSMYPVVLLESKTIEEFKEKLIDISREMLNAKQ >gi|343387924|ref|AEM23414.1| 3-deoxy-manno-octulosonate cytidylyltransferase, 3187980..3188750 [Brachyspira intermedia PWS/A] MAKITAIIPARYESTRFPKKLTYELLGKPIIIAVYDNVKAAKKIDDCIVATDSKEIMDICEKNNAKAVMTSSEHTSGTSRIIEVAKKIESDIIINVQGDEPLINESVLNPLIDAFDDENVDIATLKTRIEDDSQLIKDENAVKVVTDINNYAMYFSRATIPHKRFDQNISAEYYKHIGVYAFRKDILLKIEKLEECKYEMIEKLEQLRWLYNGIKIKVLETKKFLHGIDTREDLEFVQNYLRNFAQSELNNENLYK >gi|343387925|ref|AEM23415.1| hypothetical protein, 3188826..3189056 [Brachyspira intermedia PWS/A] MLEIIFIVSAVSLFLFTDFEKIFIVILDTVFELIKSVFIIIFLAKRFLVKNISQFLYDIFIEPIIYIFGFLNKKNN >gi|343387926|ref|AEM23416.1| phosphoglycerate mutase, complement(3189152..3189898) [Brachyspira intermedia PWS/A] MTKVVLIRHGESVWNKENLFTGWADVTLSEKGIEEAKAGGVELKKAGFTFDKAYTSTLTRAIKTLNLVLEEMGLLWIPVDKCWQLNERHYGALQGLNKSQTAEKYGEDQVKIWRRSYDTPPPALEKSDERYPGHDPRYKNLSEKELPLTECLKDTVARVVPFWENVILPDIKAGKKIIIAAHGNSLRALVKYLDNISDEDITELNIPTGMPLVYELDDNFKAVNKQYLGDPEAVKKAMEAVANQGKKK >gi|343387927|ref|AEM23417.1| TPR domain-containing protein, 3190028..3191593 [Brachyspira intermedia PWS/A] MNNEELDLQFHKLYEEGNHKGIIELILSLPEEQLNDDIKGQLAVAYNNTGEFDLAIEILNSLSEETKSHHTWFYKIAYAYSGKSDMSNANLNIDRALYTLEMNKSLISNEEYDYYSNLYNNLKEYIQGGSLHYEANSVNIDDPDSIIKDISSILSNDIDNEIIEGSIVIKKWNIFINAYPDTITDKSAVINYYISSPDWDRDIFECCASAGKDANTSVGLSNGSFIFGIMTGIKAMNENRILDEVETEFAGKKHKWKVYTSNLVNMGGDNGKPKNVNIYWDMFKDDILKRIGNQKICYIKIYGAKAGNDYSIGELRINDVNIPELADKMNEYVKTWNETDFSSDKQFFFLLQDNETYTPYPFSNDEILKFIREYSNIVLNLKESEESYDKLGNLAEELTKDYSLASDLFLFLPEICADNEFYNELHSGEIVNFNFQSSQKNCSVYKTQLYTYHLINNYLFELFREGAFNGKENEIYLRFINMSAGYNIYSQIKADYEKKNQKLENLEVNLGFNVDDDYEIR >gi|343387928|ref|AEM23418.1| TPR domain-containing protein, complement(3192007..3192270) [Brachyspira intermedia PWS/A] MSGLTFLFAFLLVISIFTRYFILPKIFSKDSKEFKKYVEEAYNDLDKYYNSGNERSKEMIKNSIIGMAKEGNDIAKKFCEDKGWDIK >gi|343387929|ref|AEM23419.1| glycoside hydrolase family 1, complement(3192914..3194338) [Brachyspira intermedia PWS/A] MAFDKNFLWGGATAANQCEGGFDKDGRGLANVDVCPIGEDRLKVISGKMKMFDFDDKHYYPAKLGIDMYNHYKEDIKLFGEMGFKVYRLSIAWSRIFPKGDEKSPNEKGLLFYENIFKECHKYGIEPLVTITHFDCPMHLIKEYGGWRNRKLIDFYENLCITLFNRYKGLVKYWITFNEINMILHLPFMGAGLYFEDGEDENKIKYQAAHHELVASALATKIAHEVDPNNKVGCMFAAGSTYPFDCRPENVWEALCRDRKEYFFVDVQAQGKYPNYALKMLEKNNCMPEIWEGDLKLLEENTVDFVSFSYYHSRCVDVSANTQSSEGNVFASAKNPYLKYTDWGWPVDPLGLRVTLNQVYDRYRKPLFIVENGIGAIDTINENGEIIDDYRIDFHREHIKVMKDAVEIDGVDLIGYTTWGCIDLVSASSGEMKKRYGFIYVDLDNEGKGTLKRTKKKSFSWYKKVIASNGEDLD >gi|343387930|ref|AEM23420.1| PTS system, IIABC component, complement(3194380..3196320) [Brachyspira intermedia PWS/A] MGKYESLAKEIIKNVGGKENINSLTHCITRLRFKLKDESKANDEVLKNMDGVVTVMKSGGQYQVVIGNHVAEVYADVCTIAGLESKSSNNEEEENNKGNLFNRAIDIVSGIFQPILGVMSACGMLKGFNALFLALGLYKDSSGLSILLNGIGDALFMFLPLFLGFTSAKKFNLKPMLGLAIGAAMCYPALQLSTLSKNAEPLYTLFANTIFASDVYINILGIPIISMDYTSTVIPVIFIVYFASKCEKFFNKIIPDLVKFFIVPMLVLLVSLPIGFLIIGPVTMFGSMIISQAVFAVRNVSPLIAGTIVGGTWQILVIFGMHWGFIPVYINNMVTLGYDNIMMPFFGCTFATAGVLLAIFVKTKDKKLKEMALPNFISSVFGVTEPAIYGITLPMKKPFIISCIVGALVGGFYGHFNFRKFFAGGMGIFEFPAMINPDGTSGNIIVAVSGAVLAILLGFVITFFTYKDKEKNAEITESTENKESVNDKNKTALLNKEIIFSPLKGKLLKLKDSKDEAFGSESLGKGALIIPEEGKAVSPINGTVSTVTPTLHAIGLTSDSGIEILIHIGINTVELNGKYFKSNLKEGDKVSIGDTLLEFDIDSIVKEGYSIESPVIIVNTDEYLDVLETESNVNINYKDSILTVIK >gi|343387931|ref|AEM23421.1| transcription antiterminator, complement(3196415..3197260) [Brachyspira intermedia PWS/A] MKVGKILNNNVVVVFENGKTEKIVMGRGIAFGKKVGDSIDEEKIDKTFLLENSDNNSKLQQLLKDIPAEYLNTTEKIIAYAKTKAERSLNDFLYITLMDHIYMAIVRTKDGVNIKNMMLWDIKKFYKDEYNIGLKALDIIEEDFNIRLSDDEAGFIALHIVNAQTNDDYGCIKEMGEITKLIQKIVMIVERHFNIKFNEESLYYNRFITHLKFFALRLFQKNIYNDKEDEDLLSVVKMKYKESYECTLKIAEYILLSYSYDISDEEKLYLTIHIEKAKRRE >gi|343387932|ref|AEM23422.1| hypothetical protein, complement(3198321..3198956) [Brachyspira intermedia PWS/A] MCAYEVCISAVPIYRWHTTIGNNMNIGAVRSIPTMFILNFFTLGIYHYYWIYYITLEVQNFTKRKDISPLLELLLTIITCNLYSIFWYNKYGNIIHKEIALKIDENDKNDVTQAVMVSFIIVLFVGIPIIGGLIFAFVMGALLSGMSVLYGGAYNSFTLNPEVLLVFAGTILALIIIVLVITAMLLIPDIIMQKKLNSIWTKIKELHYNKN >gi|343387933|ref|AEM23423.1| hypothetical protein, complement(3198984..3199790) [Brachyspira intermedia PWS/A] MKKIILFLLSINFLWAFPPDAAHFNELLSDNGKMTKNTLKVKKLDGTYSAAKIYFDGEVTLTGVLERADDFETNNALRFYPDNNIDLPFLFSTDSHNIDDYKEFERLDFGILLDDKNVNLPSPLNKAFLGVSAVRAEVTIRNYSFYGEGEAGREAYGDLVNFKLLGDIKTEYFTKDNYDRNYYDTLEYNSKDDYVNIRDKPNGKIIGKILKNDMINNGGLLLLVDSNGDLSDWEKNWIEVYYLPPDDNDGKGTIHGFVHGSQIKTRYN >gi|343387934|ref|AEM23424.1| hypothetical protein, complement(3200054..3200923) [Brachyspira intermedia PWS/A] MKKIILFLLSINLLWAFPPSEAYFSELLSDDGKVTKNTLKAYNVESYGMVYFDGEITLTGVLERSDNEDMGNNYTALRFYPDNNVDLPFLYDSSEMNLKNQGASKYGDSWDFSGVKFDRLEFGVLLKNIEVKLPEPLNKRFLGTAAVRAEVTIRYYRFYGEGEASREAYGAIVGFKALGDVETKYFSKYNYNVGEVHYNELQYNSKDDYVNIRDKANGKIIGKILKNDMLYDGGVLLSINGEGIDYENYQDIETKWLEVFYLPPEAGNGEDAIHGFVHGSQIKLENGGY >gi|343387935|ref|AEM23425.1| TPR domain-containing protein, complement(3201323..3202357) [Brachyspira intermedia PWS/A] MVKKYIVLIIVGIVLMVNISYGISQDERNFLNACHYGYIDIIEKLIDKVNINVQDEEKGYTPLMNAIRGRKIETVKILLEHNADVTKIKSNNGRNAFFWAAALDELEMLKLFEKYNPDFNTVDNDGATALFYASKIETMDYLIKNGIDVNKKDITGRTALIQYSLAYQSQNIVKFLIENGADVNAQDNEGITTLMFAVKDYNIEIVNMCLSANANLHIKDKEGKTALFYTLLYFYAIDYGKNMTYNMFGKINTEITEFITGNRKKEQEEATKNVIKFVKLLIDNGADINSQDNKGNTLLMYAVTFKYKPLVDDILKLNPNVNIKNKEGKTANDIAKEYGYKIVK >gi|343387936|ref|AEM23426.1| TPR domain-containing protein, complement(3202726..3203274) [Brachyspira intermedia PWS/A] MSIFSISCSNNNNNNILDAIVNNDLEGLKKLINKENINTGITIKDEVSILDRSYEINKETPIILAVLSRNKDMIRYLLDNGADPSIYDGRERNAFLWACGAGNVEIIQMLVEHDPNLVNSRTGNNANGIIIAADFRNIDVFEYLVKDLGLDVNHMDDLGVTALLLSRKKEAKEKLIELGAKR >gi|343387937|ref|AEM23427.1| carboxyl-terminal protease, complement(3203890..3205359) [Brachyspira intermedia PWS/A] MMKNKERLLWIFLLIFVVAISFFNFKSPSLAIAQQGNAQSDNDFYYYSRLFQKVFATLQQNFVDTNSVTTKKLMYGAIKGMLEATEDPFTFLLDEELNTALNTEMSGKYGGVGLSISKNADKGLMVVSPIEDGPGEKAGILSGDIITEIDGKSTKDMSVDNAANIMRGKEGSKVTLTIVREGVAEPIKYPLTRAIIEIKSVKYKMVDNNIGYIRITTFGDDTARDLENALIDLKKQGMKKLILDLRNNPGGRLDTAINIVEEFLTEGKIVYTRGRSRNENQDYYASKKGDEWLEGDTLVLVNQYSASASEILSGALQDSGRAKLLGETTFGKFSVQYVLPLDARDNTSFKFTVAHYYTPNGRRLHGKGLTPDFVVVEPKLTSTDITALTELRKGGQISAYAKKYPNESSDATALPAFKEELRKQNIMPSDYLLERLIYNERNLDNYKEIYDLRYDKQLKAAIEYLQTGKEPPQDKEEPRENWSNEKEEN >gi|343387938|ref|AEM23428.1| hypothetical protein, 3205569..3206267 [Brachyspira intermedia PWS/A] MKYTKNFILTFVVLAALLSCNNIPTSAIYTLKLKDRAGRYSVKGNFNKDITLDFIIFETGNINFIGKKADTANNLGTYILGNPETTNKTFSFDIKETINGVEPNTYFIDFLYSKLRYSNNEIPFEKTSDSTNIKFNERVGIYYNQNKNNKITVSKNKIEWSYFTDAYIDIADSYSEEMVFTKTVDFQNANNENHSFTITFTFTDNSIKLRFTITDPAYSKYNREEEYRIVWE >gi|343387939|ref|AEM23429.1| glycoslytransferase, 3206289..3207398 [Brachyspira intermedia PWS/A] MIKVSVVLPIYNVEKYLPKCLDSIINQTLKDIEIICVNDCSTDSCENIIKDYNKKDDRIKLINHDENQGLGFARNTGFNNSNADYVAFIDSDDFVSNDYIEHLYNTAKKYDADIVFTDNIYTVNESKGYIKPYYHNRLEKWKKDFKDKYLEGISNFDVSAIEKENTPEYPLAVAWNKLYKKSFLKEKKLLYTKVRLAEDVDMFYRILANNPKMYYNHNSKYYYLQRSTSLAGSVHTAKKIPIAILEVFENVFNYYKENKKELLIECNYYNFLSLMHTFNNYKADNKNEFYKKCHELMKKLDVEIDRDKHAFYAYSVYIMKTYDDYNIYLEKIESIKKKVFDAAWWIPSITLREKYKKANLDKLANKNWK >gi|343387940|ref|AEM23430.1| hypothetical protein, 3207481..3207999 [Brachyspira intermedia PWS/A] MKKEYKYRLTEDDFIDFQLHYLKSNSNMTSSVKKTIIILVVLYIVVFASMAIYFRDNAFLIVVIALLVSAFSILQIFTYKKRLEKKIVKKVKEYVRSGKLDKVFGDKELTIYDNKVVFKEDKGTSQFNKDEIIKIDSTNKCVFFYIDEMSAIIIPKQILNSEDIDLLLSYKK >gi|343387941|ref|AEM23431.1| alanine racemase, complement(3208004..3209101) [Brachyspira intermedia PWS/A] MANYTIAEIDLSILKKNMQIIKSIIKDVKLLNIVKANAYGHGLIEISKASERFGADALGVANVEEGIKIREAGIKLPILVLFQHFKDESDLVCKYNLSPIISNDECLESYDNFLKKNGGNLNLYIKVDTGLNRMGAKPEEVVSLAKKILSYDTLNIEGINTHYAASDMQDDYSVSFTNKQIEVFNNVLNDLNKNGIEIKNAHTSNSAAIISYKNTYFDMVRAGIILYGYNDEFLGIKPILNLKSHVVLVRNIKKGESISYGMTWTAEKDTKVAVIPIGYADGVPRKLSNNWEVKINGKYYPLRGRVCMDSIIAEIGNDNIKIGDEVLIFGNDERINADTLAERIGSISHEVLVNIGERVKRVYIE >gi|343387942|ref|AEM23432.1| methyl-accepting chemotaxis protein, complement(3209212..3211866) [Brachyspira intermedia PWS/A] MILVFFIISLVGSIIEIIGYSLITKAFLHTTALAIFNATINAALLSCVFMLLFKLLSKNFELDENIVTFYIPLIAKLGLIVYLFFSTIILAFLLNHVSIEEDVYLKNYSNLVLNEMLTISDNMKKFDDNIKLDMMSYSEAVLNIYSNKNVISRDDIQTHFVNRLAYINDTLENKYDSVSVNINQEYLDTDLPYSVTISKDSATDRYTSRVSDALTIHNFLENDIQNNFVTLGIDVYDRNNIYVSAYTPLRLFGRDIGYLISETGIGNVNSIIKKNDLLSQWSYIYYVAVKRDIILGSDSRYIAESASEVLSSSPDLVKNIENFEKSFGANKTFEIFYPINIAGKKSIAIVSYIEELKVIGLYYKDVSTIIKDSDINIQIFNFIFIFISIFILFFVIYLVILKILLSSISRANQSTKMLLGGNGDLRKRISSKNNDEIGVLIYNFNLFLSSLDNLIGDLKIESYKVFEEIKVIEKIIDENTNRINDQSSSITESVASVNNIITSIQNVTNSTDQQRHAFSSASIAVEELLQTIYKINDNMERQSSAVEQTSASIEEMISNITSVARSVNKADSFSKKLLVDAHDGGDTVDEVIEAVRGIEESSDQIKEIVNVIQGIAEQTNLLAMNAAIEAAHAGEQGRGFSVVADEIRSLAEHTADNTKSITNIIKAITKRIEETVELASNSGKSLDNILDMSENTARVVSEINTANSELEVGGRDILETIRHLNNITTGVKDSVKEQMNSGDVVDSQITLLDQITREVSDIIEANSSGAKEVMHAMSFLNELSVKTVEGNKEFYTATSKLNEIFVKFNELMGKFVTNADNLEEAKNERVAKKNPENYTVDERMDMELRSLEEEFKRDNDEFKKDDDVLEMLKEDFKNPEMFSM >gi|343387943|ref|AEM23433.1| flagellar basal body rod protein, complement(3212198..3213046) [Brachyspira intermedia PWS/A] MVRGVYTGASGMMAEQARLDVVANNLANVDKPGFKRDTVSFKAFPEMMAARTEDDGVVIFPLGSTDVRPYVGRMGTGVEVNEVFTEWEQGSLRETGNQLDIALGDKGFFAIETPNGERYTRNGSFLIDKDHYLVTKHGYKVMGENGYIQIKTNNFNIDEEGRVSINRRYQDGNTFVQFNDNEWEDEEILDTLKIVRFDNERYLKKEGESFWVDTDISGPAYIAQKGVDRPKVLSRFLEMSNVNPINEMVRMIEVQRAYELNSKTIATHDTLVGRVINEVGRV >gi|343387944|ref|AEM23434.1| UDP-N-acetylglucosamine 1-carboxyvinyltransferase, complement(3213064..3214359) [Brachyspira intermedia PWS/A] MYKYMIEGSNNIGGVLKVSGSKNASLPLLVASILTDEPVILHNVPDLVDVHVLINILEPLGKKVDFKNNTTVIISHNGKSEEAPYKLVKKMRGSIIVLGPLLAKRKHCRVSYPGGCAFGPRPIDLHLKGMEALGAKIDITAGYIDARVEGDLIGADMDLSGKFGPTVLGTDNVMMAATLAKGTTIIRNAAKEPECTNLVDLLSAMGAKITGGGTDILTIEGVEALHGAEFTVIPDRIETGTFLAIAAAGRGKLKLENAEPKHLTYVLDLLSDIGCDIKTTETTIEIDARNKELKPFKVETLPYPGFPTDLQAIYTTLACTIKGKSELIEGIYPDRFSHVPELVRMGADIELNTSDIVVNGGKELSGADVQASDLRAGAALVAAGAIAKGTTNVHRIYHIERGYENLEEKLKTINIETKKKKMIFYNYIIKN >gi|343387945|ref|AEM23435.1| hypothetical protein, 3214927..3215073 [Brachyspira intermedia PWS/A] MDNIFYLISREQSAISNQQSAISNQQSAISNQQSAISNQQSAISNQLI >gi|343387946|ref|AEM23436.1| hypothetical protein, 3215348..3215914 [Brachyspira intermedia PWS/A] MNKKSFLILILCLLFIFSCKNNNTNPDNTEPPPTKTDFEEKIESYQKDFSFGSTNEFIEDLSINNQTSFVKDTAIGHHYIGYDGKSLYTGTADSKYYVKTIYLAEEVTWNGVKYIVKKEIPFNIEDIKTFLSSTEPEKVTVNDLTKVYENANDFIYCISYPKNSEVKRYAVLAFRGISAYFGLIPSEA >gi|343387947|ref|AEM23437.1| TPR domain-containing protein, complement(3216513..3217214) [Brachyspira intermedia PWS/A] MSVVKDNDSSMDSKYYFDNANIFCLEGKYEEAIVYYNKAIELDPNYSAAYYNRGSVKADLGEYEEAIKDYDMAIELDHNYTYAYNNRGLAKDYLGEYEEAIKDYDKAIELDSDYSDAYNNRGIVKNVLGKYEDSIKDFNKVIELNPNDSDAYYNRGTVKDVLGKYGEAIKDYDKAIELNPNNGAFYNNRGVSKENLEEYNEALKDYKKALELDPNYDIARENIKEIQDKYGLK >gi|343387948|ref|AEM23438.1| hypothetical protein, 3217848..3218234 [Brachyspira intermedia PWS/A] MNKEYKDEIVYETMLKMGFLHYFNTNYYYNNKGIQFKNDAEYTFIGLFLSFDNNILTINHNHSILYLSEFLTKHNITKLTDIEPSSLIDVEYEGKDPYYCFSKLNNITQKVIITFIAEFDRIYSSLAK >gi|343387949|ref|AEM23439.1| putative GTP-binding protein, 3218383..3220542 [Brachyspira intermedia PWS/A] MINIAILGRPNVGKSTLFNRFAGRRKSIVDPMAGVTRDISIAKTYIDDIAFNVFDTGGLLDVSDDTLNEKVREKALKTALEDSDILLFLVDAHQSHPDDRHFINIIRKSGKPIILVINKVDADSHNNLVSEFYSLGIKDVSIISAEHNNGIDDLREKILEVLERNGFDLEAEREISKNNDSNNDEYNNTIEIENIDEDFEEEYYDDDLDEEDDEENYNNKKEKSKQYRLDEYIAQKKTINIAIVGKPNAGKSTLLNTLIGKDRSIVSNIAGTTRDAIDETFNFKDDDICLVDTAGIRKKKNVNTDVEYYSVNRAIKAIEASDVCILMLDVFEGLTDQDKTIANLIIERRKGIVIAANKWDIREKGTTWNDYEAYMKDAFPVLNYAFYARVCANRKNDAEKLLSLAVRVAKTRMQRFETHALTETMVRATREYSISAGGNPFKIFYVVQTGVNPPAFAVFCNHPHKLNSHYKRYLENRFREMFDFRGTPIILNFRKRGKNLEVKNMIVKIIVSILVSYIIGAIPFSFIIGKINGHDVRKEGSCNPGASNVLRVCGKKAGIAAYICDIGKGMIAVLVPSFILSSIISTHSYILVACAVASILGHVFSIFLGFKGGKGVATSAGSMFMLAPVSLILTMVFFFIGLFASRKTVAIGSTCGAIAFPIVLSFLYFKANFLYRIFFNINYIVLLPIAILLAIFIMIKHIPNYKRMLKGEENSFSKK >gi|343387950|ref|AEM23440.1| hypothetical protein, 3220650..3221027 [Brachyspira intermedia PWS/A] MKHCIKILSLSFIFLFIFSCSNKTKIAGRYEGVLNTTQNTKQLITNKCIVIVNDDNSMSIDIQGENIYKDNISISKEELIKIDDYSYVASKNSKNYTFVFHSGYMVLTIENTDNTTTKGELSKIS >gi|343387951|ref|AEM23441.1| VWA containing CoxE family protein, complement(3221653..3222792) [Brachyspira intermedia PWS/A] MDNNVDNKNINRWRLILGSFAEDNLKLDGEYAEMDQSLGFLYDREYSKEAGYADFENNDKQRGGKGASVLTVPTWVAKVKKLFPKKTVEIMQTHALEKYNLTEMITDENILKEMEPNMELLKNILTFKDMMNGNVKKLAYDIVRKVVNEIKNKMESDIKKVFYGKKLPNSTTQNKIFKNLDVKKTIRNNLKNYNIEDKTIFVDKLYFNQNIKKYNPWHIIILIDESGSMLDSVIYSAIMASIFSNLPYLSIKLIIFDTSIVDLSDSVKDPIDVLFKVQLGGGTDIVMALEYAKKITTIPDKTIVLLISDLYDNKDYKYMYKSARDIIEARSKLFVLPALDYNADASYDKEAAKQLSKIGAKVAAITPNELSKWISSVIS >gi|343387952|ref|AEM23442.1| abortive infection protein, 3223035..3224225 [Brachyspira intermedia PWS/A] MLKKFTISNYRSFYDEAVLDLTVDIAKENECRFIKKINDEYISKLCLLYGYNGSGKSNLINALKFILYSNNGYITSSDDSIKKLLDPNMIHGKNDKSRFCLEFYSNDECILYLYELVLDNENKRIYSEKLIKNNDIIIFKRELNYIKDGIFNYNKYIPDTNTFLSFINDEKIDEYREEVNYYLSLFKNLCFLFPFTNEADFSSYAIVEAFDYFNKYNVWYIYKKLLSFIDIDDLSIEESISQNEFSFIIDNKRLVSKHDSYKNDFDEVESEGSKIYAINLIYILVSLLNGTLSIVDEFNGIQSELLEFVVNLFGSNVFNKIHPIETDTSQLILSTHDSSLMSIEGTMLYNYFITNKENNISRIYRVDDLSKTNNNLNIDNLEKEYRKNRLGLTKKK >gi|343387953|ref|AEM23443.1| TPR domain-containing protein, complement(3224240..3225421) [Brachyspira intermedia PWS/A] MKEKAIRKLNLVILILFPIMLLVFSITYNIYSVGTENRIRKELENFTNSLSLRMESKYMDMMTLYFKEELNNYAIANEFTNLVKEQVRLGITPHFNSLKFSVDYTMKNNVRTTTYALLFIAVLMFILTLVINFTNNSISNTSYVSPPANNVNENIKEDTQKPSNPIGNMIDSSSSEAIRLEIEEMYKRLVKEMKNSRDDQALEIIEKMFQLDDRNHLALNGAGILYTKMYGRENKDEYFKKANEYFQYALSLYTNNENVSNNKAILYSVRYELKKSEEDYETALIIFNDALSANHLDVELLNNRATLYSVKYKIGGDENIFSRSLNDYDELIKIDYNNIYALNNRSALYFTKYKNSGDKKYFDKSIEDCNMAFKINSAEALYDNRGSLYIYKY >gi|343387954|ref|AEM23444.1| hypothetical protein, complement(3225762..3226502) [Brachyspira intermedia PWS/A] MGLFMKKILLIIIIITFNMKLFAASGFEAVLSVPLGVSLGIFNGEVESIGKEPQVNTKAGFDAGVNAQLGYMFAFEKFGLSVLADLGYSYDSFKYSVYHSVSALGGSEEYNIENSLYLHSFQIGILPKFNFGAFSFGIGGGVKIPISGTSESKTIKTINAFGNSIKSEYNVKKDYKKSDYLSSFISYFKVTFDYSFFFTSKLAFNLGAYFGYDIGLSYKATDLNEKYRVDSFDFGFQIGLRFSPKL >gi|343387955|ref|AEM23445.1| hypothetical protein, complement(3226587..3227288) [Brachyspira intermedia PWS/A] MKNIKKLSLVIALILVANIKVFAASGFEAALSVPLGASFGIFNGEITTTGIAPAINSEVGFDSGVHAQIGYMFDFGGFGLSLLGDLGYSYDSYRYSMSLTILGVEEKTYQSLYLHSFQLGVLPKFNFGNFALGIGGGVKIPMGGTSEVKYMVDGSEVLNQKLDYKSSDVKSNVIGYIKATFDYSFFFTDNMAFVLGAYIGYDIGLSPKGSDNRFDSFDVGGQIGFKFGPRVGS >gi|343387956|ref|AEM23446.1| hypothetical protein, complement(3227312..3228055) [Brachyspira intermedia PWS/A] MNKIKRLSLVIALILVANIKVFAEGGFEFAVNVPIGASFGITSGFEPKYTSSSGTTKSAITTEAGFDSGVQVQIGYMFTFGNFGLSLLGDLGYSYDSYRYSDYLDYEYNSVKEKHKETISMYMHNFQVGILPKFNFGNFAWGIGGGVKIPMTGTLEDKVENSLYGNSTTKIDYKSSYFEVPVIGYFKMTFDYSFFFNDSMAFVLGAYLGADIGPIWKQGEITLAKDASISSFDIGVNLGFKFGPRLN >gi|343387957|ref|AEM23447.1| fructose-1,6-bisphosphatase, 3228711..3230654 [Brachyspira intermedia PWS/A] MRDEDYLELLSKKYPTIDAASVEIINLKAISQLPKGTEYFLSDIHGESDGFEYLLGTSSGVIREKIELLFKNTLPEHDRVELQILIVDTKNLINKKANESDFGDWCKITIYRLIRICKLVTSKYTRSKIRKKMPANFAYILDELLQTDSEENKENYYFSIIESIIEISAADKFIIALCQLIRQCSVDRLHIVGDIYDRGPHPDKVMDSIMTFNEVDIAWGNHDIHWLGAAKGSLICVANAVRLAVRYNNFDLLEYSYGINLRSLSSFANDIYKDDPCEVFKPNTLDKNIYDEVDKDLAAKMHKAISIIQFKLECQLIKRHPNYGMDERILLDKIDYDKGTITLDGKTYELKDKNFPTIDKNNPFELSEGENTLIQTLAFSFMNSPTLQRHMNYMYAKGGIYKIFNGNLLYHGCIPTKEEGGFDDVYIDGKYLSGRKYLKQVEDKVRKAFYCEVGSEEQLNALDYCWYLWCGPKSPLFGKNKMTTFERYFIEDKETHKEKYNPYYYHIDNKEYCQNILREFELDINRSHIINGHVPVKTHKGESPIKGGGLLLVIDGGLSKAYHKSTGIGGYTLISNSNMMAIAEHRPFTEVVESGFKLSPRSIIVERFIKRVTVGETDIGKQLSKRIDDLLELLSAYRSGIVKEKVD >gi|343387958|ref|AEM23448.1| chromate transport protein, complement(3231107..3231685) [Brachyspira intermedia PWS/A] MIYARLFYVFAKLGLFTYGGGYAIIALLLGILKEYNWITSSEFSNLVAISQITPGPIAINAATFVGYKVAGVLGSAVATFGIFIPAFIITMIVSKFFYAFKNNEQFNNIMNALRVCAVALIASAVVTFTKDAFFVELTETSILRNIDFIQNIFKYISPIGIFIFALSIFLKIKKVPILAIILISAVLGIILY >gi|343387959|ref|AEM23449.1| putative chromate transport protein, complement(3231700..3232308) [Brachyspira intermedia PWS/A] MDSNTEKNTNSDNLSNTLKPKWYTMFFSFFYIGLVTIGGGLAMLPIMEDEFVNKRKFITKDEIIDIFALAQSIPGVIAVNSSLLTGFKVAGLFGGIMAGIGVMAPSFIIILMIAPIFERFQNTEYVNKAFLGIRGAIAGLILLSAFGMGKQVIKDKFTAFLFILSFVLVVFLHFNVIYALLLSALIGWIYYLINKYVIKKQS >gi|343387960|ref|AEM23450.1| [2Fe-2S] binding domain protein, 3232542..3232799 [Brachyspira intermedia PWS/A] MGGIHMEYDVEYLKNQTSINYDKTLCYCKNVSYRDAYKAIADNKFTTLEEVVAKTQASTGCGGCKDRILSLIEYAKKNNYEPLNV >gi|343387961|ref|AEM23451.1| YbaK/prolyl-tRNA synthetase associated region, 3232814..3233275 [Brachyspira intermedia PWS/A] MNEKVLNALKELGIEYKEFEEAGVTKTVDDAAKTLNIERGQVAKSILVKPSKKNFAMIIASGDKKISSKKMRTYFDCKTSFANAEDTFKLTGFTFGGVCPFGIDKDIDVLVDKSMKRFDALYIACGSDSSLAKMTYDEILEKISNVEVDLTED >gi|343387962|ref|AEM23452.1| hypothetical protein, complement(3233407..3234576) [Brachyspira intermedia PWS/A] MKKYFILIIFLFNIFILNAREYSTLNEVLKTPVSYNIYKGNNTEKTFNAVRYIKNNYSKETFKAKNIYSTSKIDVYLENGLEINERELENIILETSKIYEMEEYLYGKLKGKLTLLIMDINGGYTGDKPYMQGYSILDGLNEIKNDTQNIIFLDYINGWENPESVVNTIAHELHHVIHYSQLQNKSSNAFDVWVDEALSEAAVISYRGKVPSNRLNYYNTDSMYLITKGDYFINWNQGYTVHKYATVSLFMYWLGLHSKNGFEIYKDIANAPEEYRGTYKAILYAANKNIKQFQDWSELYATWLEANYKNDKSGLYGYKGYIETKPKIITTQYNCPMAPGSAIYVKGDFMSDDTLLRYVELGDDIYIVYNPDVNTKGKDRYLIVNSSFY >gi|343387963|ref|AEM23453.1| conserved hypothetical protein, complement(3234718..3235113) [Brachyspira intermedia PWS/A] MTKGTVRSVPMLVLLSIVTCGIYYLYWIYKTTDEIKNFMGREDINPTLELILVLVTCNIYSLYWYYKYGKIVYLEMTAKAGMDNSEDSTVLLVILGLLVYVVAGAIMQDKLNAIWNSIDDSGNATSNAENN >gi|343387964|ref|AEM23454.1| aspartate kinase, complement(3235259..3236620) [Brachyspira intermedia PWS/A] MKVAKFGGSSVANASQIKKVVDIVLSDKDRRIVVVSAPGKRLKEDTKVTDLLITLAETIIAGKDGKLELKIIIERFKNIIDELSLSHELLEEIQNDILKRIAEDKSLPTKFIDGVKALGEDLSAKVIAAYINSIGVKAKYVNPKDAGLLLSEEFGNATVLEKSYSNLSKLKDESALVIFPGFFGYTEKGDVVTFPRGGSDITGAILAKAVNAEVYENFTDVDGVFAAAPNIVDNPKLIDEFTYREMRELSYGGFNVLHAEALQPVYEANIPVHILNTNNPSAKGTRIVASRNKNVNPVVGVSGEDDFSCLYVSKYLMNREVGFGRKLLEIIENENIPYQHAPSGIDNISVIVRNSAITPEKEKRIYERVRDELHVDNIYFEHGLALIMLVGEGMQQCVGVSARAMHAMEKCNINIEMLNQGISEVSIMIGVKDDDLNKAIKSIYKTFFEEQNL >gi|343387965|ref|AEM23455.1| Serine/Threonine protein phosphatase, 3237230..3237970 [Brachyspira intermedia PWS/A] MNIFAFTNKGTDTKINTDTILFNSESVSGNPLLINEQNNYSHFIDNMEGTAVSMIADGLGDTFASKLAIDVYNENFLDLLELVGEQEIMNWIMHNFIKLEVVAARDSADDKEKAMAGASIAGVLYHKFAGVFVFNAGDSKVYAVNRNKVFQISRDHMKGNALENCACAGGGHYITIEGARRNQNYNYFIASNSMVELLLNKYGNIEEAINDIMGSSNTEEAINKLKNIAENSKDNVSALGLLNLFE >gi|343387966|ref|AEM23456.1| hypothetical transmembrane protein, 3238112..3238615 [Brachyspira intermedia PWS/A] MGYHKNMKKGTTRPIPIMLLLNIVTCGIYYIYWIYQTSVEIKMCSEREDLNPTLEILLGIITCGLYFKYWYYKYGKIVYKELPLKAGINNTEDKTMVLVVIDIIIALMWWGSMILRILLLAISSYTSSDEELIYSFLYIIPSGLIYVVNISSLIMQDKLNNIWKHMQ >gi|343387967|ref|AEM23457.1| adenine deaminase, complement(3238907..3240637) [Brachyspira intermedia PWS/A] MTIEKLSKMIEVSIGKNLADLVIRNCKVVDPISATITDADIAIVDDYIVGVGSYNGKEVIDAKGSYATSGLIDSHVHIESSLCTPVNFAEVVIPFGTTLIVTDPHEIANVCGIDGINFMIESAKKSPLKCKFMLSSCVPAVSFEDSGAVLDSKIIEEFINDEDIFGLAEMMNAPGVLSCDKDVLKKLLAAINADKIIDGHGVMLGGKTVNAYRAAGVYTDHECVSAKDLKSRIANGMYVLLRQGSAAQNLASLLQGVNQSNARRCAMCTDDKHLDHIIENGHISHNLKIAVEHGLDVFNAIAMATINAAECYRLKNIGLVASGYKADIVLFNDLKDFKANKVFIDGKLAAENGKALFKVEKDNYNDNIFSTINIAPITVDDIQIKLKSDEANVIRIVNKDLVTEKSVRIVGFENGYFKYRKSVDILKLVVVERHKATGKIGLGLIENYKLKNGAIATSVSHDSHNIIAVGDNDEDIILAIKEIEKCSGGITVVKNGKVLDTLQLKIAGIMSDDSPYDIVKKIYSMHELAYNELNVNREIDPFMTLSFMALPVIPEIKLTTNGLFDVKEFNFIDVSA >gi|343387968|ref|AEM23458.1| hypothetical protein, 3241043..3242725 [Brachyspira intermedia PWS/A] MGNKTRIGYISEFIFDNFHINKTLKLNGFDTENTKKLFTINGKLDNEALTNYIFTNESITNYSYGFKVGYYSKVFRHSDIYAVYPNIKKIAKENNFIKEIKIDKAGSPFGNLISTKKLEYNEQINNLEYILKFKLDIDIIVIVFGSILITSLFIKYSDNKIINNIPLLFILLLSFSILMFFIFFIKDKGGRQLNIVIRGFDLFADFYNQLRYVSERDVYFDTINGLENKIYLPFAFMIFYLFSILKNYASMSLHNIQTDPISNMSLVIFMSIGILLLILSLKKLYNKKEYSYIIPALLFMTTPVILTIERGNIIIHTAAFASIFLCLYRSEKRYEQIIALICLGIASALKIYPVILGFLLLQEKRYKDIIIGALITLALVFLPFFFFNKHSFLENFTQFILNMKLFSESYGIRYGVSLFIYKLGNYSDLYAKIIIFILFIISIIYSFVANEYWKKVLLLMIISIQSPTTAYYAELFMYPIIILFLSKEKFYKIDYIFLILFVLLIMPLQISIPISTLGSFLSATIWLIVLIETIITGTNSLKNNVYIIKEKLLIYRSSIK >gi|343387969|ref|AEM23459.1| glycosyl transferase family 2, 3242722..3243417 [Brachyspira intermedia PWS/A] MKLSIVIPCYNEENTIETIIDAVINSKCSIEKEIIIVDDFSKDNTRDKLEIIKDKVSLILYHEKNMGKGAALKTGIKAATGDFVIIQDADLEYDPNEYDKLLAPLINDKADVVFGSRFAGGESHRVLYFWHQIGNTFLTLCSNMFTNLNLTDMETCYKVFKKEIIQSIEIKENRFGFEPEITAKVSKIPNIRIYEVGISYYGRTYKEGKKIGWKDGFRALWCIFKYNLISK >gi|343387970|ref|AEM23460.1| hypothetical protein, 3244004..3245791 [Brachyspira intermedia PWS/A] MKNKLNKLLLITSAVLVVSIFALSALGSVNRIGYLSDFQLNKELSKKNEYHYSFRIKYHSKIFRNSDVYGVYVDTNKIIKENNFIKEIKMEKGGSPFGNLVTPKKIDFEKIDNINYILKIKFSVYLIFGIILLIFFILYNIKYFQYIIETPQNSDYIIFFIITLLCFFSYIYSDVLVVFPFSVNFFNVNPLNFFYEVYQKVGSYHKPDDLPYLAYFIYSILFLPLWIYSKIRNITYYTWHHAKFEIDTFEIIYIKLLLLIFVILSSFIIYKISKKIGFNDKKSKLSSFMFITSPFTMIPVFIISQVEIIMIFFTLLAILDYLNNNKRYILWFTIAIPLKLFPFFILIPLVLLKEKQIKKIALYIIIPILPYIISSILFKSPNPSDRNLVAFGTLMYHKIFGISIFIMIYSIICLFSYLKNIEDNNVFYKLTIYISFFVFSLIVIVNKSFHLYWIVIIAPFISILILFNTYNINIKIMMEFIATLFYSIHIARAGTMVSMSEALRTKSIPLIKLFVHNNSTKYNNIRDIFPTILGNADITNAIYSFYIMGIIIMLILFYKYNNYNDNNVNIPRYLIYIRFIPTLFIIFLIWYLSLM >gi|343387971|ref|AEM23461.1| glutamyl-tRNA(Gln) amidotransferase, B subunit, complement(3245854..3247305) [Brachyspira intermedia PWS/A] MEYEAVIGLEVHVQLNTKTKAFCSCPNTFGAPANTLTCPRCQAHPGTLPIVNKEMVHKTIKAGLATNCTIQKKSRFARKHYFYPDLPSYYQITQMDEPICTEGHLDITVLNDDGSSYNKSIRINRIHMEEDAGKLVHDDTGRPLSYVDLNRAGCCLIECVSEPDISTGEEAYQYLTELKKIFKYIDVSDCNMEEGSLRCDANVSIRPKGSKELGTKTEVKNMNSFRNVRLAIDYEIKRQIKALNNGEKILQETRLYDAKENTTKGMRSKEGAADYRYFPDPDIPLLVLKDEEIEQAKKELPELPQQKRERLKKDYDLPDQDIVVLTEDAALADYYEAAVKAYPKQPKKISNWIMVEVNAYLNKKLQTIKDFKPKAEHIGEIFKLIDEGVISGKIAKEIFEDMCETGEAPSAIVEKKGIKQVSDTGELETIIRKVLEENPKSVADFKAGKEKSFGFLVGQTMKATKGQGNPKLVNEVLRKILSE >gi|343387972|ref|AEM23462.1| glyceraldehyde-3-phosphate dehydrogenase, 3247579..3248622 [Brachyspira intermedia PWS/A] MAVKVAINGFGRIGRLVFQALVERGLLGKEIEVVGVVDVSTDAKYFAYQLKYDSVHGRMKADITTEGEDVLVVNGNKIKCIGATKELKDLPWKDLGVEYVIESTGLFTEKEKAEGHIAAGAKKVIISAPGKGDLRTFVYGVNHEEYDPANHHVVSNASCTTNCLAPIVHVLLKEGIGIETGLMTTIHSYTATQKTVDGPSKKDWRGGRAAAVNTIPSTTGAAKAVGEVLPATKGKLTGMSFRVATPDVSVVDLTFRSEKETSIKEIDVLMKKASETYLKDILGYCNEELVSSDFIHDSRSSIYDSLATTQNNLKDEKRFFKIVSWYDNEWGYSNRVIDLLLYMYNKK >gi|343387973|ref|AEM23463.1| phosphoglycerate kinase, 3248741..3250054 [Brachyspira intermedia PWS/A] MQTIFISDNYKSEPKPSAKQVWHILLGDGEHSNNKEFIMKKSVKDIDIKGKKVIMRVDFNVPLDKETSSKITDTTRVDAAMPTIEYILSQNACLILMSHLGRPKGEPNPKYSLKPVYDYLKTKLPNNKVEFAKDCVGEEVKKQAAELKAGDVLLLENLRYHAEEEKNDAAFSKQLADLADVYVNDAFGTAHRAHASTAGIVSAKAGMPAVAGFLMEKEIKYLGDAVANPARPFVAIIGGAKVSSKISVLKNLLNKVDTLIVVGGMAYTFFKAKGLEIGTSLCEDDYIATAKEIMDKAKELNKTLYLPVDNVVADKFDNDANFKTVDSNAIPAGWMGMDVGPKTLKELEEILKNAKTVVWNGPLGVFEMPNFAKGTFEVAKFIANSGAVSIIGGGDSVSAVNKSGVADKMTHVSTGGGASLEFLEGIELPGIAVLQDK >gi|343387974|ref|AEM23464.1| membrane protein, complement(3250681..3251268) [Brachyspira intermedia PWS/A] MDKGAYDAGVPDDYIEKVSKNAIKYEVGKSTTMSFLSGLPGGLVGVGAIPADVAQFLGHAIRIAQKLCYIAGMPSFSFGDEMTDEEAYLVAIYLGVMFEDKEAILALNTIGKVLGTAAAKVNFAVTSIIGYSVIASLLPKLATKLGSGIFAKTFVKAVPIIGGAVSGSITYVNLNSMSYKLYKKLKESRASIGQQ >gi|343387975|ref|AEM23465.1| hypothetical protein, 3251601..3252011 [Brachyspira intermedia PWS/A] MEQMMEELGSIFFLDELNILNNGYFAKLDDDDYEDDYDDDYDDEDDYDDYDDEGDFDDDDDFDDDDFDDDDDFDDDYDDEDDYDDDYDDDDDYDDDDIDDFDDDFDDDFDDDFDDDDEDYDDDYDDEDDYDDDFDE >gi|343387976|ref|AEM23466.1| hypothetical protein, 3252073..3252210 [Brachyspira intermedia PWS/A] MMSEKKFKKFNNNKENNKKFYNNKKIKITSIRKNTIININIRKKA >gi|343387977|ref|AEM23467.1| hypothetical protein, 3252243..3252569 [Brachyspira intermedia PWS/A] MREDVERPICPICNEPIYIVEEAIRHNASGELAHFECILNEIKENNIADMESEDKIVYLGSGTFGIIQERQNGKNTRFFVRKRINYENRKVKRIEDDADPEEEDLFNV >gi|343387978|ref|AEM23468.1| arginine biosynthesis bifunctional protein ArgJ, 3252562..3253725 [Brachyspira intermedia PWS/A] MYDMPLGFSSAVMKSGLKNNDYDLAIIKSNPPSVVSAVYTQNNFQAAPIIFSKKNDKNNIELLIVNSKIANALTGKKGYDDVLDIVKYASETYNIKKDNILMASTGIVGIELETEKIKKAINISNKHFNNNFDNISKAIQTRDKFDKIYTTQLEVASGKIANFYAVAKGSSIIHPNMATVLLFIFTDLNIEKEALNKAFKESIDKTLNRISVDGETSTNDMALIMANGALNNKIITEKNKKLFKDLKYKLDEICAYLAKMIILDGEGITKTMIVSVKRAKTQSNAFDIAKKIATSNLVKILFLSKNPNFEKILSVLGNCNININNVSLYVNDEEIYKNGIINKYNVDTERKENYITIDLGYNTKYEDYYYFTDLTQEYISIHSSYNI >gi|343387979|ref|AEM23469.1| MATE efflux family protein, 3254280..3255530 [Brachyspira intermedia PWS/A] MIGLSCYILADTFFVARGIGSDGLTALNIAIPIFNLVNGLGLMLGMGSATKYAILKTQNKNNEANIIFTNSLIYILIISVLFIVVSIFLTSHIAYILGARDNIHTMTNTYIKMILLFSPMFMLNNVLLGFVRNDNHPRLAMIAMLMGSLFNIVFDYIFIFPFNMGIFGAVLATVFSPIVSILILSTLFIKKKNTFFIVKPNISFKKFFEISSLGISFLITELSSAFVMVAFNIIILNIAGNVGVAAYGITANIALVIIAIFTGMGQGVQPIISMNYNNEMNINKIYKYSIILSASISIVVYIITFVFANEITSIFNRDNIEELQKISVNGLRIYFTAFIFVGYNIITCVYFSAMDKAKPSFIISILRGFVFIMPSIFILSSLFNMTGVWLSFPTAEIFTSIFSFIFFINFNKKKRY >gi|343387980|ref|AEM23470.1| acetyl-CoA acetyltransferase, complement(3256362..3257537) [Brachyspira intermedia PWS/A] MREIVIASAVRTPVGKFLGSFSNVSAVELGTIAVKEALKRANIKPEQVDETYFGCVIQSALLPNVARQISINAGIPVDKPALTINILCGSGLRAVSMAAQMIRAGDADIVVAGGTENMSMAPYTSSAMRMGARMAETKMQDTLLNDALICAFEHYHMGVTAENIAEKWGITRQEQDEFACRSQNRAEAAVKSGRFKDEIVPVTIKTKKGEIVVDTDEHPTFGTTMESLGRLKPAFKKDGTVTAGNASGINDAASAVVVMSKEKADELGIKYMAKVLGYATHGVEPRIMGIGPVEATRKALKMANLTVEDMDLIESNEAFAAQSIAVARELKFDMDKVNVNGGAIAIGHPIGASGARILTTLLYEMKKRGSKKGLATLCIGGGMGTSLVVEM >gi|343387981|ref|AEM23471.1| putative thiamine monophosphate kinase, complement(3258020..3258979) [Brachyspira intermedia PWS/A] MQEFKLIEKIKELTKSNNTDNLNIGDDCAVIRNISTDKDVLVTTDILVENIHFSLNYYSFYDIGYKSAQANISDIICKGAEPKNAFISLSIPKKINDENILEWYSGFIEACKPYNIEISGGDTTSSNDFFFISVTLIGIIEKNKSILRSNAKIDDNVYVLGFVGESDLGLKKLLSGNYDYNDYSIKTHLRPKLFYDRWQDIINKYKINSSIDISDGLLQDTSHIAEESNKTIEIYESSNWNLVNRFFNKDNKNNNKEILKSILTGGEDYAVIFTTSDNIPEENNLIKIGKVKEYSNTYIRFIDLNNKEIHFDSLGFVHS >gi|343387982|ref|AEM23472.1| putative electron transport complex, complement(3259350..3259925) [Brachyspira intermedia PWS/A] MKKEVGYTAVISVTITALLAGFLLSFVYSSFEKDILANNEKTVLNGVKTVIEGADELEGPLTENSTYPYYIGKKADGTVVGYAMLSSAGGYNGENKVLVGLDANVEKITAIVVTEQAETPGLGAKITEPAFRDQFKGQSTIVSLSVVKGIKPEEAGDAQIAAISGATISSTSVVNAVNSAKDEAVNLFKNQ >gi|343387983|ref|AEM23473.1| putative electron transport complex, complement(3259928..3261031) [Brachyspira intermedia PWS/A] MMKFYTESSPHIKDGDTTNKIMLRVIIALLPAVIYSIVLFGAKVIVLYLTAIITCILATVIVKKVRKKPLLPDYAVIVTAILLVMTLPPSSTITMVVIGSAVAIVFAKEVFGGLGSNIFNPALVGRAFLQVAFPAQMTIYAAPARVPFLDLFAPGLHNLVNSVTGGTQSIDMMNALTQSTPLTFMKFTYNANISTSLAEQIGFESHYYLQMLLGSTSGAIGETSFLLLLIGGIYLLATKTIDWRIPLGMCLSLMFVSLLLCLGMPGKFPSPIYQVLAGGFGLGAFFMATDMVTCPSSHLGAWIYAILIGAVLAILRAFGSSPEYMMYSILIGNMFMPLIAMLTRPMPVGKKELLAINKANAQKEGGK >gi|343387984|ref|AEM23474.1| electron transport complex protein, complement(3261044..3262351) [Brachyspira intermedia PWS/A] MNLGRFRFGGVHPHDSKDTADIASSALSKPPKTVLISMSQHIGAPAKMLKNKGDKIERGELIGEAGGYVSGNVHSSVTGTAASVEIAAPPLGRGANALLINVDSNADNLAYFESSDYMSMPVEEMSKKIQQAGIVGMGGATFPTHVKVDGAAKGNADTLIINGVECEPYITSDYRLMIEYTQDLFKGIEILRKIIPSVKRTIIGIENNKPKAIEEMAKIGKEHNVEVMPLRLRYPQGAEKMLIEATTGRIVPVSKLPMDVGVIVVNIATLYAIYEAVAKNKPLIERLVTVSGDAIKEHKNVWLPLGTPISHVVEECGGITAENVLILSGGPMMGAAIPNLEQCVNKGTNSLLFLDKDKLPKEVEYPCIKCGRCGNACPLHLSPTELAHTAKAKIKDKLNDLDIATCFECGCCTYICPSKIPLVQWIRFGKDLLRR >gi|343387985|ref|AEM23475.1| 3-oxoacyl-(acyl-carrier-protein) synthase III, complement(3262402..3263256) [Brachyspira intermedia PWS/A] MVYIKSCKGTYKNNKTNMAASDLALLSINEVIKDIDPNNIDAILCATVTKDYVYPSTACILAGKIKASNAFCFDIESDFTGFLSALRLAYAFVKSGRYKNILVVATESFYICDDENRFDDASAAALVTNEKSDIQIDFIDSVTDGNALENCYIPMGGTAKPYTKEGVLNKEHFISIKDSGIFEEEAKKAGLYVKDILSSNNINPDLYIPSYSSPNAYNAFVDALSVSKDIVYSKMENAHSSLSASSGVALSMALEDGSIKKNSKVAICSYGSGYTKSVAVISIN >gi|343387986|ref|AEM23476.1| fatty acid/phospholipid synthesis protein, complement(3263269..3264288) [Brachyspira intermedia PWS/A] MNLAIDVASGEKPLEELVSGAVSALQENKDINLILVGNEQSISKAISKTKYDHNRIDIRHTDEIIDMNESPANGIKHKKNASVLLAARLVREGEADGFFSPGNTGATLAAALTEIGRLKGVMRPPLISTLPKLNGEFCMLDMGANVDCTTDYIVQFAVMGRVFAKRYLKIDNPRVGLLNIGEEDSKGNANAKKSFERLQKMKKINFIGNIEPNDMLKSDSVDVVVTDGFDGNIVLKTIEGTASFVVNLLKEEVKKNPVSVMGGLMMKPVFNNLKSKMSSDSYGSAILLGLNGGAFVGHGKTSGVGIKNAILNMYRFLDAKVNEKIAKELYDSGAKRRIF >gi|343387987|ref|AEM23477.1| ribosomal protein L32, complement(3264320..3264514) [Brachyspira intermedia PWS/A] MAVPKHRKSKAKKRSRQAANDKRFLGSLSICPQCGAERMPHRICPECGFYKDRVVKAPKTQNAG >gi|343387988|ref|AEM23478.1| hypothetical protein, complement(3264656..3265645) [Brachyspira intermedia PWS/A] MMINQLKIIFFILIFFVISCSDEESSKETTIISIIKEKNTRRYNSIEKGLLDQINSDGMDVQINFYSLDNDELSIIRTANNVRDDNSSIAIVIGENATLLSMNIIVPQTIIFAGCFDDLSVSNINRNNIQNNNITGVYINLDITKYIKIISDKNVANIAYLYTKNSEMSANISKYIARYCRNENIIYYPLIIDDNLNSHNLEDAIKSKDIDYLILADEDYINDNIYSIAYLCDKYSIPLINTDVSEAVNTAILFSLDFNYYYLGRQLALLLNDVINNNGKTEGLGFVQLSDSYKILVNEDIAEEYDIKLTEEILDISSLLIKDGKVIKK >gi|343387989|ref|AEM23479.1| tRNA (guanine-N(7)-)-methyltransferase, complement(3265642..3266289) [Brachyspira intermedia PWS/A] MRNLNLDEAILSEYLLDDFNSEDSSIIENELQKRLSDYEIRELEIGCGNGKFIVELAMNNKDKYFVGIEYSYKAAKKAVSKAYKRNIKNLTIIFGEANNVIEKYLRGKYYFDKIYLNFPDPWPKKKHAHRRIFTRVFLDKMHTILKDDGIFYSVTDDDNYALEIMNPIYKEAENFKNVLDSEYVHKLEGYGVTLYEEKMRAVGHNIYFFAHSKNI >gi|343387990|ref|AEM23480.1| hypothetical protein, complement(3266819..3267886) [Brachyspira intermedia PWS/A] MKGAIDAWPFIGIEYERPTESYMPFDYIHESHKRENRVKNSFPSRILYELSTIEVHMNTLIGVNLKDGHFSMPNMYLSLGKSFHFDWMFSATPFVTMTSKFDVFSKDHATGSIGLYDAGIETVTLTRILLSFRMKAVNDINGNTFMLLPSVIDSESASFAPHWYIPRVNNEMGFRAGFIGYNYELSYSQGYSKDSNPLAVALKINGDYFRAQFLYQYNDKNSLSPENFQSIYNNNINNKEDYYTHHLVQLSGMGRIPFLDKQLWLNLLGEYTWRDNDAHYVRLEIGLEWKMLNIAIRPLFYIPVNYDDDNHVNKFDPKKDLFCLEYSAYVKFDPIYFGFQGSTDGRYYIAMKAVF >gi|343387991|ref|AEM23481.1| hypothetical protein, 3268096..3269130 [Brachyspira intermedia PWS/A] MKEFTILEEKLKDFLDEYQVISFDNKELHQIIEQLKSEKEELINSLKNVKDSFNILKEEKTILEADKRNVTDNYNSIKEDKDNLIKQLEATRIERDTLKSNLENTEKDSMTLIEENDNLKKELEKAIRAIDSLSKENNELKEKLSILIERIDSVRKSNFEAKKSHHASMIHNTENAVHNESVSNESSNNTSNNANEIIEEKEDKPLEEPSQEIKEEVKSAENVFESSVEEIDEEDPFSSADEYEEYKAENNVNKTDEIKETKEVREISNVKVTEDEDPFSNASDASWDNDIKEEQTKNKTNEAVEENIDKNSKEDNYEFDINEDDQYMFGDDDEEEFFFDNESK >gi|343387992|ref|AEM23482.1| hypothetical protein, 3269144..3269491 [Brachyspira intermedia PWS/A] MDDITIVEVNIYGRMLSIKSPESNAEYLKEVAEFVNESMNDIAEHYGPNYPRDTIAILACLNIADLLKREIANNKAGKDTLLALKESIASRSNELIRLIDETKETKESKEANKEN >gi|343387993|ref|AEM23483.1| hypothetical protein, complement(3269571..3271253) [Brachyspira intermedia PWS/A] MLDSYIYIVIVPISIVILLGLIFFFKTITGNNATYKPKNIKKKIEELEKKIQLNPKDYNSMYELAVIEEQYNMPEKALEKYEKLLSIKYFEGEELNIYKKLEELYNKLDNKEESLKYTLRIAQMDVNNTYYSIKAATELGREGAYKLATEYFNRVLNNKNDFEIYELKISAISYFMNKEYRKVIAMLEELHKRLSRNISNIEDDYDELILVEKILISLYIITDEINSARTFTESILSSRAIRNYPRYRFFINRIYLYILYKSDDNEAFINLYNQYSKQYRIDEIKKEESIIILDFAFYNYFIKDINSAMSYFEHIRLFNDPEFDIYDLDSIFTYLSEIAKAEVQLKKLRGDIQLNNKDKYVKENYEKYVNAQYIESWENSVRLWEDSFNSLDTILNLIEIERNVDIEKILLECNINENNATIENVSSKKVDKIFDISLSSFKSICQDIIQKKLLYSAVQEYNEKLIDYDYGDEVNYLAFAVNKSKKDLTLISFKRWRNTEVGELVIRDFLLLINEAGAKNGILVLPLELTNSARSYATHNDKIKVYTRNQFNYMLRDSKM >gi|343387994|ref|AEM23484.1| hypothetical protein, complement(3271271..3272950) [Brachyspira intermedia PWS/A] MSDTTLYIIIATIFIIILISTIIMIKNIFNKKVHKPSKNTKKKMHELRKIVSLNPKDLDSLYELALIEEEYQELTGALPKFELLLSKRYFKDNNINEIEIYKKLESGYNQLEDKENSFKYAMMISKLEPNNIDYALKIGNVLGQEGKYKLASEYFNKVIVSKENISIEEARTAALSFFMIKDYKKSIIFLEELYKKILNDKEIDILEIYNIEILLVSLYISADELNIAITFLEQILSNRNISEDHKLYVNRIYMYILYKLSDNDKFISKYNELRTYYKLDEAKKEYAALIFDFAFYAYFLKDINTSINYFTKLNSFHMLEYSVYYLDQILEYLNEVNKASIQLIKLRGDGKFNNEKYKNENYEKYIDSELIDIWELVLSLWQGTFIKFDHITSNAPNPENKIDIDKILSELNAARENDSTKNINLNEIDKIYSLNLSNFKKLCKNLIQNKLSYSILQEYTDNVINYNYGDEVNYLAYHVTKSRKDLTLISIKRWKNTEVGELIIRDFLLMVNESGAKNGILILPVRLSNSAKSYAKHNDKITVYTRSQFNSFLKTNFVN >gi|343387995|ref|AEM23485.1| Histidinol-phosphate aminotransferase, complement(3273060..3274124) [Brachyspira intermedia PWS/A] MSKFLSDKAKSIEPYTPGEQPKDKNYIKLNTNESPYPPSPNVKKALIGSSFDDLRLYPDPNVSDLKIEIAELYNVHTNNIFVGNGSDEILAFSFMAFFNKGDKVYYPNITYSFYSVYSSLFDLNEVKIPLKDDFSIDINDYKNLDAGIFIANPNAPTGLLLTLSQIEEIIINNRNNIVIVDEAYIDFAETESAYKLVNKYDNLLVIQTFSKSRALAGIRLGFAIGNENLIQGLKNIKYSFNSYTINRFSIIAGIEAIKDNNYFKDTVNKVIKTREKTKIRLKELGFNVLDSKSNFIFISHKNVFAEDIYMKLRDNGILVRYFKNDLINNYIRVTIGTDEEMDIFVEKIENIIKN >gi|343387996|ref|AEM23486.1| hypothetical protein, complement(3274223..3274339) [Brachyspira intermedia PWS/A] MNFFKKIKNFFDFLRNLTVIYIIKNTYSTFIYGEKYHI >gi|343387997|ref|AEM23487.1| methyl-accepting chemotaxis protein McpB, 3274457..3276298 [Brachyspira intermedia PWS/A] MKKIHSLSFKIPVIISSIIFITIASLASISIWSSSRAIRKSALEGFSSTVSGYSYMIDMVLHEQLLAIATYSQSGTLANGIINIDDITVRNEAEKRLKDFASVNTYAVNVGLADINGVVLLDSSNPKLIGASIAEIHKDLFSQMKANNYKFTYDNSPSISSTTGGQALLLCGGIKNSQGNIIGLVYINLDLQKVNDEFISSLKINGRITVANNNGNIILSSDNKRIGGNLPEVYDIIKTKKEGIIESYTYEGYEGKRSAAYQNVNIMPWTVVFAKSDSEIYKEIKYTILRTVIIGPLFIILCTVLIFMYIKSITKPLDELVLISREISNGDLTSTHRNIKRKDELGVLANSFFDMRDRLSDIIIKVRTSADEIRMNAKELSTGSIDLSKRTEAQAASLEETASSMEQMASTIKSSADQSLEGNKMMIDSREAIQNAGEIILDTTKNIEEVYDASTKIKDITKIIEDIAFQTNILALNAAVEAARAGDMGKGFAVVASEVRNLAQTTQSSVKDITTLVDNAYEKINKATESARVSQDIFSELQEKIENTAKIMQDISSTAVEQHEGVEQVNRAVTDMDTVTQQNAALVEEASASSNSLLNQAEELVNAMSFFKV >gi|343387998|ref|AEM23488.1| methyl-accepting chemotaxis protein McpB, 3276590..3278341 [Brachyspira intermedia PWS/A] MGTLSVLSSTRAVKRATLNGFKSTVSGYASMVDMVLHEQLLAIDTYSKSSTVFNILYTNDVNVKQQSINRLKDFNSVNRYALNMGLADVNGKIISDSDNASLEGTSIFDSDPELFTRLKANNYNGTYANTIAKDSQAILLCRGLFNSQGNLIGIIYINIDLGKVNKDFIDNINFDGDITIANDKGIIMLSSDHNRIGTSLPQVYDITKTTSEGLIESYVFGNDKNKRSAAYKNISIMPWSVIFANYNSQIYKDIRGIIFRTSTIGPFFIILACFVVALYIKTITKPLISLVLFAKEISQGNLVYEHQNINRDDELGMLANSFFNMRDVLLDIIMKVRVSADEITNSARALSKDSEDLSRRTDTQASSLQETASSMEEMASTIVSSTNKSVDGNKMMINSKASIEHAGSIILDTVQNIEEVNEASTKIKNITKIIEDIAFQTNILALNAAVEAARAGDQGKGFAVVASEVRNLAQTTQSSVKDITSLVDNAYEKITKATESARESQEIFKDIQDKIDVTSKLMEDISTTALEQQSGVQQVNKAITDMDAVTQQNAALVEHTSASSSSLLNQAEELVNAMSFFKV >gi|343387999|ref|AEM23489.1| flagellar hook-associated protein FlgK, 3278877..3280790 [Brachyspira intermedia PWS/A] MSTSSFFGIELGKRSLQNFKTALEVTGHNINNVATKGYSRQRVVMRSFDKPLEAPSLNRAERAGQIGQGAEITTVERIRDQFIDSKIMMELGTDGYWKTKSDYLKQLEAIYNEPGNANLRSDLDAFWDSWQEMAANPTERGTRMVLVERADRINNSINQMFNQMNGMRNNLNNLVENKVNRINDIANSIKDLNTEIVKQQALGQSPNDLLDRRDLLVDELSSLANVDIKSMDPDETMIYIGGRALVQGNVVSELSAEKNINNEGMYDIYWKKDHVQVQFEGGELKALLELRDVDTVDAINDLDTFAMNLADSVNEVHRSGFGLNQETGIDFFTVTKTTPSVIGNFDINNDGQEDSTIMFKVSGVNSVDSTASIGSSGTLVFGNKSREGADVAIDYTAQMKVGELIDKINSSEANVSAYLDDKNRLVLKARGFDDYMKPSYFIKHIQDSGDFLVGITGVLNQSGAAGAYNWQTIDQVNQLAGDFRNFTVTPDRHPAAAIAVNDIIRNDVNYIAASKGIDTTGNGFNDKWNGIGDGSNALAIANLKTKEIMVDSKSTFNDFYTGSLAKIASRTETANAETEKQTVVMEYLEKLRQSVSGVNLDEEVAQMAMYQHGYNASARVVSVMDQLLDVVINRMGV >gi|343388000|ref|AEM23490.1| methyl-accepting chemotaxis protein, 3280961..3283831 [Brachyspira intermedia PWS/A] MPILTTQEHFEMGIKIRIILIIVGVMVLVAFSTNFLSNTLNTETFSTVIERSLDNRFRLIEKEFEYNILSAREESAKISTTLSVVYNNIKNFTIDDRDEYFKNFLSATVNESQLYFNRIVSVLFHPNAIADGNEPFTLYRYSTFNKEFTKVNTTNKAMWDVLTNTYGQTYKSILRRQILKPYMINEGPHIGMTFNIASTIPDIQNEEKIVGIANVGVLFNYSTENIKDILNIEGADIMVIDKRNSAIINSKNPDIVNGRLDILYPQYYEVFNSNLTAGFSKTDNIEINNTLCKAYVANIAGLINIVMLIPNSYYTAQIKDMNDAIFYTIIIAFLMAIVTIIFFIKLLFSSITKISDAIGNSVDNKDLTVKIPAVSGSDEIGEMTKWVGLLNNSLQSVLSSVKRTILTSKKQSDTLSQKISDNLEIIYGINNNIEVIKNNVNDELNQVELVESSNQNMQEYIASNTSNIDSVEKDTRELQSKIIEEGENIEQIAASVEEMSKTIENIDAIISKATNKAKDLSLASVKSKEKMQATSMATGDLRNALGFISNFVSSIRNIAHQTNLLAMNAAIEAAHAGKYSSGFAVVAEEIRKLSEVSNEQADNANKVLQNIEEKIIITTNDLTESTEQFDILTKDVQEVTEIMDTVHVSSVEQLKAINEIVDSITKISQSSDHIKTQYIDMADKLGNIRNSLESLNNISISTSKTMNKLKTISESIHTSVVNISDSSNDLSTSANVMNKFANDNNKLLSELESEISQYRIRDIKTKKDTVTQRVKGITLIILKEFIKTKFGEEGYQKWVTAMEPSSSLIFKNEISSKEWYPYMTSFHKPYKLVCDLFYAGANTGIKEISEYHYHQIIPKYIRPLLFFVPKHFALTYAAEHIFTDLFDPARIELIKARKKLLVVHLTNFNDDPEVIELAVLAWASLLLESLTHIRSTMEITKSIKDGEIYTEFVLKW >gi|343388001|ref|AEM23491.1| ATP-dependent nuclease subunit B, complement(3283897..3287013) [Brachyspira intermedia PWS/A] MQELFLFPNYKAKNNYLKDRFKKYTLDITNYQTLHQYYRSSKEMFFENYKIDNNVQDIDESISIINIHNILFQYKEKNKEALISKQNTTYELAYTLYKLIEEITLAKFYGFKLEKYNNLKDINAIINLYKEYNKENNLLDEFDIFELFIKSIENKELEFLNTYESITIYNFEKIPPLHLIFLESLKKHYNKNIKVVMPYDMEKHFNNYKSFYQGIDNFEINETSNFAKALIGENKDINKYKDKIKFISGFGAKQEADTVIDEIIKLIESGVNPYDIGIIFSDIQSYSDIVSSRLKECQIKFNERRANFIWKVPIIPVLTSIFLILDKYNGEIDVDTLIKILSSAYIKLDGVNPYNIRDLIYSYEHFNSIEIFSKMSFKDFKNKISKKFEYNEASKSIAEFLDLLNNLVSKKSYKEIGLAYINILNFLNIGNIENTKDSEELDNIYDKKNEYFYRDNEALALFINLILEIAYTEKLENIDNQDISHFDFHSALNTILRDKSIGEDENRDITLTVSNLYDARGLKLKHIFILGMNNDFINRRPNAFFISAKFREAINKENKKIVFNTQSYLSDIHYALFLNILSSSYEDSNIYFSFRFKDEKGNLEIPFYYLENLYRELYNEDFKFESLEKNGLIYRKEYIQREDNIHTDKENLMSLFLYNDIAYKIDNAESIIDLVYHKQNKNIHHDFNNNEDIKNFFLNILKEKVSVTTLQAIMECPAKFFYSRLYSKESVESKIQGINYMDRGSAYHRFFQNFYEEVRNQYSDEGCHLIESEFNNYCNIANQVVEDHINKLIKSYSSKDLEEKYLLEYKFDLNVIREEALNVMSSFIKKEIINNKLKEEDEGAFYIPKYFEEKIGDEKDFVIYKNKDLSIKIRGIVDRIDLSYSDKKHKNINGVRIVDYKSSYKLEKPKGETQKDIIRETIRIYLQPILYLKYILSEYIKKNIEEKIKHCEVVFTVYREKEVINESQQINQMYNDRDMLLSICGFIDSEYNLTDYFDEVFNKILEGELVYISNITNCANCYNAPYCEKVYRKDDDES >gi|343388002|ref|AEM23492.1| NorM, Na+-driven multidrug efflux pump, 3287208..3288581 [Brachyspira intermedia PWS/A] MNQNDKKIDIFENYPVYKALITLALPTILGMLVNVFYNMVDTFFVGQTNDPNQVAAVSLTMPIYLVLMSFGSIYGIGGASYISRSLGARNYDKAKQVSSFAFFASVITGFVCMIVFLLFLNNILKLSGASQNTYKFAKDYLLIVAFGAVFVVCQMSLGQIVRSEGSSKEAMIGMMLGTIINIILDPIMILYMNMGVAGAALATIIGNASSTLYYIWHIAKKSSFLSIRFKDFSLTKDILNNVFSIGFPVFMNNVLISIANILINNFASRYNDNVVAGLGVSQRIFMLVLLVFIGLGQGVQPFIGYNFASKNYKRMNASIKLSCLFSFVSGIIFLIFAFIFSKELIAIFIKNDEVIEYGSKFLIAAYSVAPIIGFQFVFISTFQALGKALPSLILSVCRQGIAFVPAIYFGTKFFGINGIIWSQPIADVVSILLSGGMYIYIYITTKKKNMLENEINS >gi|343388003|ref|AEM23493.1| imidazoleglycerol phosphate synthase, complement(3289057..3289785) [Brachyspira intermedia PWS/A] MDVRDGRVVKGTNFEGLKDVDDPVELAKYYNNSLADELVFYDITASYEGRKLFVNVLEKVANEIFIPLTVGGGINTIKDFDMVLKSGADKVSVNSGAIKNPDLIREAAEKYGNQCVVLSIDIKRVNGKYSVFSKGGREDTGIDAIEWAVKGEKNGAGELVINSIDTDGVKNGFDIELLKEIADNVSIPLIASGGAGNLEHFKDVFQVKGVDAGLAASIFHFKEIDIKELKEYLQKNNIKVRL >gi|343388004|ref|AEM23494.1| Fumarylacetoacetate (FAA) hydrolase family, 3290060..3290956 [Brachyspira intermedia PWS/A] MKFVSFVEWNNTESVGILSKDGNKVIAINEIISDFKCNNNPMIQLINMINENNDILNKLKYAEENFERAYSIENVKILSPIRKPIHDIICVGVNYSDHLGEIKKDMKDFKEVKAPVYFSKRAIEIIGFGDKIKSRFDLDECLDYEAELAVIIGKTAKDIKPEEVNDYIFGYSIFNDISSRDIQKKHSQWYKGKSLDSYSAMGPCIVHKDDFKLPLKLDIKSILNDEVRQSSNTKYMIHDINYLVSDISKGMTLEAGDIIATGTPGGVGMSFNPPKYMKSGDKIICSIENIGELINFVE >gi|343388005|ref|AEM23495.1| hypothetical membrane protein, 3291528..3292028 [Brachyspira intermedia PWS/A] MRTISLRKINVNIFILFLLSIISLASPIITHYFGFKGTEFLPLFFALSLGAYILNPVFLIMLSFISPLLNYFLTNMPMPPTLYFLIFEGVVFASVISLMKNKNISFILTSLFAIILGRLSSVILTFIFDISINTWLNGVIAGYKGIIINWIFASIMYLILKDKINE >gi|343388006|ref|AEM23496.1| ComFC, Predicted amidophosphoribosyltransferase, 3292021..3292563 [Brachyspira intermedia PWS/A] MNNIFTAYKKFSIDNISITALGDLDKELGDELRAFKKKSIDFPIKITEQIKNYYSDYIKTNNKKFDIILYVPSNKNNGVMDFFADYIYKEFNIEKCEFIKIKKDIKEQKFLETLKERNENIKDAFEIVNYDKLKNKNILLIDDVYASGETIKEIIKIFKEFQFNYNLEILIFCYRNHIFS >gi|343388007|ref|AEM23497.1| aspartyl-tRNA synthetase, 3292782..3294542 [Brachyspira intermedia PWS/A] MRFKSAYNGILTKDDIGKEVKLAGWVLRRRDHGGVIFVDLRDRTGFVQIVFNPEISKEAHNDAQDLRSEYVISVEGKIRARSPEMINPKIPTGEIEVMVEKMELLNTSETPPFLLEDDIDTGEDIRLKYRYLDLRRPTVFNNLYKRFQITNAFRKHLSDNGFIDVETPILNKSTPEGARDFLVPSRLNAGDFYALPQSPQIFKQILMIGGFDRYYQIAKCFRDEDLRADRQPEFTQVDIETSFLNTDEFLSIMENVTANIVKDVYGIDLPTPFPRLNYYDAMEMYGSDKPDTRFELKLINVEDAVRGCDFAVFKNALDNKFIIRCLNAKGGEKLSRKDIDDFTKYVGIFGAKGLAWMRVTDKGLESNIVKFFSEENQKKILEVTKAEKGDLLFFVADTPKVTFDALGNLRLKVAEKLNLIDKDKLNFLWVVEFPLFEYDHKEKRISATHHPFTAPVPEDVAILESEPLKVRSDTYDLVLNGNEIGGGGQRIYDSKVQAIIFKLLGIDEEKAKLRFGFLLDALKYGAPPMCGMAYGIDRVVMLLQKQDSIREVIAFPKTQKGQCLMSGCPSTVDADQLEELHLSIEE >gi|343388008|ref|AEM23498.1| TPR domain-containing protein, 3294895..3296685 [Brachyspira intermedia PWS/A] MEVNNTNNKYKNNTCIMIILFLLAFGAFSGIYFLHTKNIESRFNKALENYSLNIQTIISNTTIDKTVTTNESENTITINNEFIISEEIANNFKSTFDINTKMLESSMAEIMKNSNDVLSFWFAFLSVIMIVFTFAGIFINNNILSESKENFKYINDLKKDIENYKEKIHNYELSIENLQLKIETETQRKIFELETNSNKFLKEIDEKNNEALNSIDKLKIEFNDSINSIQEKSNQMISDIKEQAQTESEQLIKSIKDKAEEETQKLIEKNNINIEISNLFNSAYQADNNKEYDKAINYYNQIIEMTDDLLKEYDKNSEEYSQYQNNYYIAYNNRGNAKYNLEQYKEAIKDFDKAIELNPNSSKTYYNRGNTKYSLEQYKEAIKDFDKSIELDPNNQDTYNNRGIVKADLNYYKEAIEDFNKSIELDPNCSEAYNNRGTTKLDLGFNEKAIKDFNKAIELNPNNSSAYNNRGNAKNKLGLYKKATKDFNKAIKLNPNNGNAYNNRGNAKNYLKKYKEAIKDFNKAIELNYNQFIAYYNKGISKSYLGLNDEAYNDFIKGYNLADDTSKKEYEQRIIDLAKHNNEAAIKICDKKGWKY >gi|343388009|ref|AEM23499.1| HAD-super family hydrolase, 3297294..3297977 [Brachyspira intermedia PWS/A] MNKLDLVIFDMDGLLLDTETISLAAWKKSFKNYNVNIDVEKLFFSKILGSNENTIKNTIMEISNNNEKLFYDIIKSQIEESFNIVREDGINIKKGANELIKFLNDNNIKKAIASSSIRKKVDLYLEKTNLKKEFDYIVCGDEAESPKPYPHLYNNACSYFNADKNNVIILEDSKNGLLSAKNANIEKRFYIPDLLLLTEEDEKELAYKKFHDLIEVKNYIENNFKYN >gi|343388010|ref|AEM23500.1| hypothetical protein, complement(3298319..3298741) [Brachyspira intermedia PWS/A] MNRLLKIIIIFSAFFISSCLNFNTGSLSFNNNGIDDKYYGTYEGSVTIIENNNLTSQATANVIVSSGSVVTIRIWGSLINLHIPIYKESLIKISDNMYKASVTSSGIRYDLTLSFNSSIMNLYYVSSNNAIGEGNLTKIR >gi|343388011|ref|AEM23501.1| hypothetical protein, 3298889..3299260 [Brachyspira intermedia PWS/A] MAIKEDNENNENPNDLIKEYIETNNELSDLMMKISNKENTTRLEIGISISEAINIRDKLSREIDIYKSILKEVNSKDFRTAKNEVKMKVLVNVKDIQNEFDKLSKAFNDIDVMIQSANWNTDL >gi|343388012|ref|AEM23502.1| nicotinamidase, complement(3299388..3300290) [Brachyspira intermedia PWS/A] MSDVYEKIVNEKYIGKEVNPINQSDIFHLADIYSKKFNFKNNDNNIALLIVDTQRDFIDPKKGSLPVKGALKDIKRIINFIYSNLEDISRIYVTMDTHYYDSIFHPYMWKKHSGEDVDPFTEVTLDKIYNHEIIPLYKKEQIQYLKKLEKANARNLIIWPYHCIHGTDGWLIEKQLNNMLLFYERLREKNIHKIIKGTERLTEMYGAVKPEVITPETRFFDMAWVYELKNYKYIYVCGEAKDFSLYNTLCQICDVYSSDKNITKKINVMINCSSSIYNTKEIEKKYSKLQKDYGINIIEV >gi|343388013|ref|AEM23503.1| arylsulfate sulfotransferase, complement(3300322..3301905) [Brachyspira intermedia PWS/A] MKRFAAFIILMMILFLCFSCSKKEIPLPDDKVGEFILNPNGQTPLSLLYKIETNNNYPVTVITEGRLGDEDIIFTYPKNYGSNFAIHGLYSENTNTVHIINGTNRISTNIIVDKLSIDGLYIPATNRVIRDLKPEENVYFFNINDESSITNLKDNNAELYFASPVINRSWKGLFLMGVSRKGNLRYVNYSNFYLTNEIAKVIDQDNDIVIYDTMGISDLLGNAKLDVTKLNIGVHHDVIRKKSDSNYIMLANSEWGVEDRICEVDSNGNLIRDLYVGDLIKKIVNKNGDESEKEYLKKLIFDEDNKYYSIGRKKDFPMDWAHCNSLVYDESNDILYLSVRSLAVMAVDYSEWELIWYMADDTLDTMESYNPYGRYLKDLKSFDPYKVLGDGNTDGPKSQHALFLISTNVIGMFDNQGDEDINPNGSRYVEYKITGSHGSWKAEKIYEYKTENKLYSHYISDIDFLSNGNMLLDFGNNAQIMEVDKETKEVFYHLKFGVKTWGIYRIDKMPLYYSDDHKYSEDSSFIN >gi|343388014|ref|AEM23504.1| ankyrin repeat-containing protein, 3302092..3302802 [Brachyspira intermedia PWS/A] MKEFFDAAKSGDLNKLKECLNKNININKLDDEGFTALMLASIFNRVNITEELIKNNADINLQTDENWTALIFASFYGHSEIAELLLKNNANLNIKNKQGFDAFLTAVFYKRIDIVKLLLKYNADVNTKNNEGFTPLIYACNHDNTDILKLLINHNADINGKTNDGVNGLMYACLMLKEDIVKELLENNINIDEVDNNGDNAYIYLKSNENNESDNEGNEDLKTMNRINDMMNNYIK >gi|343388015|ref|AEM23505.1| 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1, 4-benzoquinol methylase, 3302934..3304652 [Brachyspira intermedia PWS/A] MQDICIITDIGTIYGFGHITRMKFIANKLKEYYNFTFSSINNNSSIFKDNTINTCRYNEIENLNPYLVIVDSREVDSKYIKELKKISNVIIIDSVGNERAFADIVIEMLPNIDNSKEVNIKPFIATILNSNVKPKYDADAPILLYLGFNNELKNKAIEIISKIEDKNFVLIDTEKESEYSNIRYKNFGTDIFENPYSAVITYFGLTAFECIESSIPVILLSPTKYHDDLARIQEELFFNLGFFQNIDTDTAINKLKEFLFNNDMQNKFREKGKLINTDKSLERIKTIIDNIKDFKNIECPFCKSRNIEMKNRNLESNLYKCQKCNTLFRKYFLPPFTDYSSKYFVEDYKNQYGKTYEEDSANLTALAKRRLEKIKKIKPNGKVLDIGSAMGFFLKEAKEYGYETEGIEISEYASNYCINTLNLNVHNCSLLDFEYKEKEYDIITAWYVVEHIYNFESILERIIYSLKDDGILAFATPNGNGLSGRYNKNYFSIVPSDHAFEANPKSLDILMSKYSLKCINLENQSVYYNRFCDVFGLNFIRKNNFLSGIYSSFAKSKNLGDTFECIYQKSLK