Click here to switch to the map view.

The map label for this gene is 222102798

Identifier: 222102798

GI number: 222102798

Start: 461338

End: 461610

Strand: Direct

Name: 222102798

Synonym: Avi_7514

Alternate gene names: NA

Gene position: 461338-461610 (Clockwise)

Preceding gene: 222102797

Following gene: 222102799

Centisome position: 73.02

GC content: 54.21

Gene sequence:

>273_bases
CTGAGCACGGTCGATGTGGAAGACCTTCTTGCTGAACGCGGTTTTATCGTGAGCAGGGAAACGGTTCGTCTCTGGATGAA
CCGCTTTGGCCGACACTTTAGCGACTGCATTTGGGGAGACCGGCCCAAGCCGAACGATAAGTGGCATATGGATGAGGCCA
TCATCACGATCAGTGGGAAGAAATATTGGCTCTGGCGGGCCATTGACGCCGATGGTGACGTAAAAGCTGCGAAGCGACAT
CAAGCCGATACAAAGCCTGGTGCCAGATGCTGA

Upstream 100 bases:

>100_bases
CGAGACGACATGAAGTTGCCGAGCACTTTCCTCGTCTGAAGCTGTTTCATTTCCGCGTGAAGTTGTCGCCTACGCGGTCT
GGGCCTATCATCGGTTTGCT

Downstream 100 bases:

>100_bases
TCATCGGGCCCACAAGGGCCTGAACAGCAGAATTGAAAACGCTCACCGTCAGACCAGGAAGAGAGAGAAGATCATGGAGC
GGTTCAAGTCGCCCCGCCAA

Product: transposase

Products: NA

Alternate protein names: IS6 Family Transposase; Integrase Catalytic Region; Integrase Core Domain Protein; Transposase-Related Protein; IS Element Transposase; Integrase Catalytic Subunit; Transposase Protein; ISHne6 Transposase

Number of amino acids: Translated: 90; Mature: 89

Protein sequence:

>90_residues
MSTVDVEDLLAERGFIVSRETVRLWMNRFGRHFSDCIWGDRPKPNDKWHMDEAIITISGKKYWLWRAIDADGDVKAAKRH
QADTKPGARC

Sequences:

>Translated_90_residues
MSTVDVEDLLAERGFIVSRETVRLWMNRFGRHFSDCIWGDRPKPNDKWHMDEAIITISGKKYWLWRAIDADGDVKAAKRH
QADTKPGARC
>Mature_89_residues
STVDVEDLLAERGFIVSRETVRLWMNRFGRHFSDCIWGDRPKPNDKWHMDEAIITISGKKYWLWRAIDADGDVKAAKRHQ
ADTKPGARC

Specific function: Unknown

COG id: COG3316

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10474; Mature: 10343

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTVDVEDLLAERGFIVSRETVRLWMNRFGRHFSDCIWGDRPKPNDKWHMDEAIITISGK
CCCCCHHHHHHHCCCEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCEEEEECCC
KYWLWRAIDADGDVKAAKRHQADTKPGARC
EEEEEEEECCCCCCHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
STVDVEDLLAERGFIVSRETVRLWMNRFGRHFSDCIWGDRPKPNDKWHMDEAIITISGK
CCCCHHHHHHHCCCEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCEEEEECCC
KYWLWRAIDADGDVKAAKRHQADTKPGARC
EEEEEEEECCCCCCHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA