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The map label for this gene is dppC [H]

Identifier: 222102424

GI number: 222102424

Start: 18723

End: 19625

Strand: Direct

Name: dppC [H]

Synonym: Avi_7018

Alternate gene names: 222102424

Gene position: 18723-19625 (Clockwise)

Preceding gene: 222102423

Following gene: 222102425

Centisome position: 2.96

GC content: 59.58

Gene sequence:

>903_bases
CTGAATCTCATGAGCCGGAAGGGATACGATTTCTCCCGGTTCTTTTCGCAAAGGAATATTATGCGGTCCTTCTTCGGTCA
AATATTCAGGGACAGTGAAATGGCAGCGGGAACGATCATTCTGGTCGTCCTATTCGCCATCGCGGTTTTCGGGCCGATGG
TCTGGCATTTCGATCCGCTCGAAGTGGACATTTTGACCGCCCTTTCACCGCCGGACTGGTCGCATCCAATGGGAACGGAT
GATGTCGGTCGCGATGTGCTGGCCCGCTTCATGAGCGGCGCACGGGTTTCATTGGCCGTGTCGTGCGCGGTAACAGTTCT
CGCCACGCTGCTTGGCGGGGGGCTTGGCCTGGTGGCCGGTTTTTCAGGCGGCTGGTTTGACCTTGCCGTTTCGCGGATCA
TGGATGCAATCTTATCCTTTCCGCCGTTGATCCTGGCCATGGCAGTCGCGATCGGGCTCGGTCCCGGTGTTATTTCAGCC
GTGTTCGGCATCGTTCTGGCGGCGATCCCCTGGTTTTATCGCCTGCTTCGCAGCGAGGTGCTGCGCATTCGCAATCTCTC
CTATATCGATGCGGCGCGCGCCCTCGGCGTATCCCGGCTCAGCATCCTGCGTCGTCACGTCCTGCCTCAGGCGGTTTCGA
CGGTTTTGATCCAGGCGTCGTCGGTCTTCAGCTTCGCGATCTTGACGCTGGCAGCGCTCGGCTTTGTCGGCCTCGGCATC
CAGCCGCCGCTGCCCGAATGGGGAACGATGATCACGGAAGGCCTCGCCTATGCGCTGACAGGGCAATGGTGGCTCGGCCT
TTTCCCCGGCCTTGGCATCTTCCTTCTGGCTGCATCCGCGAACCTGATCGCCGACCGCCTCCGCGAATATTACGATCCAA
AATCCGCGAAGGGAGGGCATTAA

Upstream 100 bases:

>100_bases
ATGGCGAGCCCGCTGAGCGACCTCTGGAGAAGATCCAGGCCGATCTCGATGACGGTTATATCTCTGAGGCCTTTGCGCGA
CAGCATTATCCGCACGCATT

Downstream 100 bases:

>100_bases
ACATGCTTCGCTTCATCGTGGAACGGGTCTTTTCGGCGCTGTTGACGCTTTTGGGCGCCTCCCTTATTGCCTTCATCGTG
CTGCGCGCCGTGCCGACAAA

Product: ABC transporter membrane spanning protein (dipeptide)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MNLMSRKGYDFSRFFSQRNIMRSFFGQIFRDSEMAAGTIILVVLFAIAVFGPMVWHFDPLEVDILTALSPPDWSHPMGTD
DVGRDVLARFMSGARVSLAVSCAVTVLATLLGGGLGLVAGFSGGWFDLAVSRIMDAILSFPPLILAMAVAIGLGPGVISA
VFGIVLAAIPWFYRLLRSEVLRIRNLSYIDAARALGVSRLSILRRHVLPQAVSTVLIQASSVFSFAILTLAALGFVGLGI
QPPLPEWGTMITEGLAYALTGQWWLGLFPGLGIFLLAASANLIADRLREYYDPKSAKGGH

Sequences:

>Translated_300_residues
MNLMSRKGYDFSRFFSQRNIMRSFFGQIFRDSEMAAGTIILVVLFAIAVFGPMVWHFDPLEVDILTALSPPDWSHPMGTD
DVGRDVLARFMSGARVSLAVSCAVTVLATLLGGGLGLVAGFSGGWFDLAVSRIMDAILSFPPLILAMAVAIGLGPGVISA
VFGIVLAAIPWFYRLLRSEVLRIRNLSYIDAARALGVSRLSILRRHVLPQAVSTVLIQASSVFSFAILTLAALGFVGLGI
QPPLPEWGTMITEGLAYALTGQWWLGLFPGLGIFLLAASANLIADRLREYYDPKSAKGGH
>Mature_300_residues
MNLMSRKGYDFSRFFSQRNIMRSFFGQIFRDSEMAAGTIILVVLFAIAVFGPMVWHFDPLEVDILTALSPPDWSHPMGTD
DVGRDVLARFMSGARVSLAVSCAVTVLATLLGGGLGLVAGFSGGWFDLAVSRIMDAILSFPPLILAMAVAIGLGPGVISA
VFGIVLAAIPWFYRLLRSEVLRIRNLSYIDAARALGVSRLSILRRHVLPQAVSTVLIQASSVFSFAILTLAALGFVGLGI
QPPLPEWGTMITEGLAYALTGQWWLGLFPGLGIFLLAASANLIADRLREYYDPKSAKGGH

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787760, Length=257, Percent_Identity=38.9105058365759, Blast_Score=189, Evalue=1e-49,
Organism=Escherichia coli, GI1787054, Length=272, Percent_Identity=34.5588235294118, Blast_Score=169, Evalue=2e-43,
Organism=Escherichia coli, GI1789964, Length=254, Percent_Identity=41.7322834645669, Blast_Score=164, Evalue=8e-42,
Organism=Escherichia coli, GI1789889, Length=239, Percent_Identity=33.4728033472803, Blast_Score=134, Evalue=6e-33,
Organism=Escherichia coli, GI1787549, Length=291, Percent_Identity=32.6460481099656, Blast_Score=128, Evalue=5e-31,
Organism=Escherichia coli, GI1787498, Length=301, Percent_Identity=28.9036544850498, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI1788505, Length=234, Percent_Identity=32.0512820512821, Blast_Score=102, Evalue=4e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32364; Mature: 32364

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLMSRKGYDFSRFFSQRNIMRSFFGQIFRDSEMAAGTIILVVLFAIAVFGPMVWHFDPL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
EVDILTALSPPDWSHPMGTDDVGRDVLARFMSGARVSLAVSCAVTVLATLLGGGLGLVAG
HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHC
FSGGWFDLAVSRIMDAILSFPPLILAMAVAIGLGPGVISAVFGIVLAAIPWFYRLLRSEV
CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LRIRNLSYIDAARALGVSRLSILRRHVLPQAVSTVLIQASSVFSFAILTLAALGFVGLGI
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
QPPLPEWGTMITEGLAYALTGQWWLGLFPGLGIFLLAASANLIADRLREYYDPKSAKGGH
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MNLMSRKGYDFSRFFSQRNIMRSFFGQIFRDSEMAAGTIILVVLFAIAVFGPMVWHFDPL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
EVDILTALSPPDWSHPMGTDDVGRDVLARFMSGARVSLAVSCAVTVLATLLGGGLGLVAG
HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHC
FSGGWFDLAVSRIMDAILSFPPLILAMAVAIGLGPGVISAVFGIVLAAIPWFYRLLRSEV
CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LRIRNLSYIDAARALGVSRLSILRRHVLPQAVSTVLIQASSVFSFAILTLAALGFVGLGI
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
QPPLPEWGTMITEGLAYALTGQWWLGLFPGLGIFLLAASANLIADRLREYYDPKSAKGGH
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]