| Definition | Borrelia duttonii Ly plasmid pl15, complete sequence. |
|---|---|
| Accession | NC_011226 |
| Length | 15,049 |
Click here to switch to the map view.
The map label for this gene is 203283915
Identifier: 203283915
GI number: 203283915
Start: 1371
End: 3026
Strand: Reverse
Name: 203283915
Synonym: BDU_15003
Alternate gene names: NA
Gene position: 3026-1371 (Counterclockwise)
Preceding gene: 203283919
Following gene: 203283914
Centisome position: 20.11
GC content: 30.86
Gene sequence:
>1656_bases TTGGACAAAAAAAATCACACTATGGTAAGTATAGCAAAAGATAATAATAATTTCAAATATAAAGACCCAGAAGGTCAAAT AAATGCAATATTAAAAAGCCTTGTAGAACTAAATATCCATAAAGATCCCAATAATAGTCAAACAATACGAATGTCATATG TTAAATTGCAAATAATCAAGATGCTTAAACGCTATAAAAGAATAATTAAAGTTTATTGGGCAATAAATACTAAAAATACA AATTATAAACAATCAATGGGTATTGAAGAATATTCAGCTTGTGATATCCAAAAAATAGTACTTAAATTATTAGAAAATGA TGCTGCAAAAAAAGTATGTAAACGCACACTAGAATTAGACATAAAGCTACTAAACAACCTAAATCTAATAAAATCTAAAA TTATAAGATTTGGTAAAGGAAAAGGAAGTGTTGCTTATTATGTGCAAAACATGGAACTAATGCCTACACATAAAGACGCA ATATTAGAATATCTAACACAAATGCTACAAGATAATTTGAAAGATAAAATCATCATTGGAAATTTCGATCTTAATGAACC TTTTGATAACGAACCCAAAAATATAAATTCAAAAACTACAAAATTTATCACAGAAAAAATAGAAGAAAAAAATAACGAAC AACTTCATAAAAATCGTATGGGTATAATTTCGCATGTGCAAACACCGGACGTTATTAATAAAGCTAATATAAGCAATATA AATAAAGAGAATTCTAAAAACTCTTTAGAGAAAAACTCTGCAAAAAGTATTTCATGTGAAAAACCAAAAAGTGGTGAACA AAAAAGTGAAAAAGTGCGATTCAAACGAATTGGCGTAAAAACTAGACTGATCGATGTGCACAAAATAAGCAGAAACTATA TGCAACAGGTGAAAGAGCTGAGCAACAACGATTCAACATACATAAACGCCCTGCTAAATTTGGAGACTGCCATAAATGAG TATGGGAAAGAATATGATATCGAAGATATTTTGAAACACTTTCTAAAGCAATTTGGCAACAGATACAAGTACAAAGTGTG GATGATGATGAAAAGAAAAGATGGCGTGATAAACGACTATGATCTCATATGGGAGGGTCGATTCAAAGATTGGTACTCGC ATAAGTATAAGAAAAATTATACGACGACAAAAGAAAAATATGGCGAAAAAATAAGATTAGCAGGCAAAAATTTTGACTTT AATGCGTCAAAAAATGTGAAAGACGAAGAAGAAGAAAAAAAAGAAAAAGAGAAAACAGAAAAAGAACGCAAACTGCAGCT CAAACGACAACAAGAATATATAGAAAGGTTATTTAGGCAAGAAGAACAAGAAAGAAAAGAGCGAATCAGAAGGAGAGAAG AAGAAAAGGCAAAGTTGAGAATGGAGGTTAAAGAAGAAATACGATCTTATGTAGGAAGTATTGAAAATGGCGATTCTAGT GGTGATATTGCAAAGTTGTACCCTTTATATGAAGAGAGTAGGGGAGATAATATTGCTGTACGCCCGCCGCGGCCACAAAT TAACACTAATTTTGAAGGATTCAAAACAACCAAAGGACTTTCTCTTGCTAGTTTAGGAATTATGCTTCAATATCAAGAGC AAGATCCAGACAAAGAAAAAATTTTGATGCAAAATGCAAAAGGAGAGACGATATGA
Upstream 100 bases:
>100_bases AAAATCACCCCTACCACGAAACTAGTCAAGAGTGAAATATTTATATATAATAGTATACAAATTAAAGTCCAAAGATTCTT TAAAAAAGAAAATCTAAACT
Downstream 100 bases:
>100_bases AATTTACGTTGAAGTATTTGATAAGAAGACTTTATTTAAGGAGAGATAGATTTTGGCAAACTTATATGAGCGATGAGATT CAGTCTAAAAAAAATGATGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 551; Mature: 551
Protein sequence:
>551_residues MDKKNHTMVSIAKDNNNFKYKDPEGQINAILKSLVELNIHKDPNNSQTIRMSYVKLQIIKMLKRYKRIIKVYWAINTKNT NYKQSMGIEEYSACDIQKIVLKLLENDAAKKVCKRTLELDIKLLNNLNLIKSKIIRFGKGKGSVAYYVQNMELMPTHKDA ILEYLTQMLQDNLKDKIIIGNFDLNEPFDNEPKNINSKTTKFITEKIEEKNNEQLHKNRMGIISHVQTPDVINKANISNI NKENSKNSLEKNSAKSISCEKPKSGEQKSEKVRFKRIGVKTRLIDVHKISRNYMQQVKELSNNDSTYINALLNLETAINE YGKEYDIEDILKHFLKQFGNRYKYKVWMMMKRKDGVINDYDLIWEGRFKDWYSHKYKKNYTTTKEKYGEKIRLAGKNFDF NASKNVKDEEEEKKEKEKTEKERKLQLKRQQEYIERLFRQEEQERKERIRRREEEKAKLRMEVKEEIRSYVGSIENGDSS GDIAKLYPLYEESRGDNIAVRPPRPQINTNFEGFKTTKGLSLASLGIMLQYQEQDPDKEKILMQNAKGETI
Sequences:
>Translated_551_residues MDKKNHTMVSIAKDNNNFKYKDPEGQINAILKSLVELNIHKDPNNSQTIRMSYVKLQIIKMLKRYKRIIKVYWAINTKNT NYKQSMGIEEYSACDIQKIVLKLLENDAAKKVCKRTLELDIKLLNNLNLIKSKIIRFGKGKGSVAYYVQNMELMPTHKDA ILEYLTQMLQDNLKDKIIIGNFDLNEPFDNEPKNINSKTTKFITEKIEEKNNEQLHKNRMGIISHVQTPDVINKANISNI NKENSKNSLEKNSAKSISCEKPKSGEQKSEKVRFKRIGVKTRLIDVHKISRNYMQQVKELSNNDSTYINALLNLETAINE YGKEYDIEDILKHFLKQFGNRYKYKVWMMMKRKDGVINDYDLIWEGRFKDWYSHKYKKNYTTTKEKYGEKIRLAGKNFDF NASKNVKDEEEEKKEKEKTEKERKLQLKRQQEYIERLFRQEEQERKERIRRREEEKAKLRMEVKEEIRSYVGSIENGDSS GDIAKLYPLYEESRGDNIAVRPPRPQINTNFEGFKTTKGLSLASLGIMLQYQEQDPDKEKILMQNAKGETI >Mature_551_residues MDKKNHTMVSIAKDNNNFKYKDPEGQINAILKSLVELNIHKDPNNSQTIRMSYVKLQIIKMLKRYKRIIKVYWAINTKNT NYKQSMGIEEYSACDIQKIVLKLLENDAAKKVCKRTLELDIKLLNNLNLIKSKIIRFGKGKGSVAYYVQNMELMPTHKDA ILEYLTQMLQDNLKDKIIIGNFDLNEPFDNEPKNINSKTTKFITEKIEEKNNEQLHKNRMGIISHVQTPDVINKANISNI NKENSKNSLEKNSAKSISCEKPKSGEQKSEKVRFKRIGVKTRLIDVHKISRNYMQQVKELSNNDSTYINALLNLETAINE YGKEYDIEDILKHFLKQFGNRYKYKVWMMMKRKDGVINDYDLIWEGRFKDWYSHKYKKNYTTTKEKYGEKIRLAGKNFDF NASKNVKDEEEEKKEKEKTEKERKLQLKRQQEYIERLFRQEEQERKERIRRREEEKAKLRMEVKEEIRSYVGSIENGDSS GDIAKLYPLYEESRGDNIAVRPPRPQINTNFEGFKTTKGLSLASLGIMLQYQEQDPDKEKILMQNAKGETI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64955; Mature: 64955
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKKNHTMVSIAKDNNNFKYKDPEGQINAILKSLVELNIHKDPNNSQTIRMSYVKLQIIK CCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHH MLKRYKRIIKVYWAINTKNTNYKQSMGIEEYSACDIQKIVLKLLENDAAKKVCKRTLELD HHHHHHHHHEEHEEEECCCCCHHHHCCCCHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHH IKLLNNLNLIKSKIIRFGKGKGSVAYYVQNMELMPTHKDAILEYLTQMLQDNLKDKIIIG HHHHHCHHHHHHHHHHHCCCCCCEEEEEECCEECCCCHHHHHHHHHHHHHCCCCCEEEEE NFDLNEPFDNEPKNINSKTTKFITEKIEEKNNEQLHKNRMGIISHVQTPDVINKANISNI CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHCCCCCCCC NKENSKNSLEKNSAKSISCEKPKSGEQKSEKVRFKRIGVKTRLIDVHKISRNYMQQVKEL CCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHEEHHHHHHHHHHHHHHHHH SNNDSTYINALLNLETAINEYGKEYDIEDILKHFLKQFGNRYKYKVWMMMKRKDGVINDY CCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCC DLIWEGRFKDWYSHKYKKNYTTTKEKYGEKIRLAGKNFDFNASKNVKDEEEEKKEKEKTE EEEEECCCHHHHHHHHCCCCCCCHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHH KERKLQLKRQQEYIERLFRQEEQERKERIRRREEEKAKLRMEVKEEIRSYVGSIENGDSS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GDIAKLYPLYEESRGDNIAVRPPRPQINTNFEGFKTTKGLSLASLGIMLQYQEQDPDKEK CCCEEECCHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHEEEEECCCCCCHHH ILMQNAKGETI HHHHCCCCCCC >Mature Secondary Structure MDKKNHTMVSIAKDNNNFKYKDPEGQINAILKSLVELNIHKDPNNSQTIRMSYVKLQIIK CCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHH MLKRYKRIIKVYWAINTKNTNYKQSMGIEEYSACDIQKIVLKLLENDAAKKVCKRTLELD HHHHHHHHHEEHEEEECCCCCHHHHCCCCHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHH IKLLNNLNLIKSKIIRFGKGKGSVAYYVQNMELMPTHKDAILEYLTQMLQDNLKDKIIIG HHHHHCHHHHHHHHHHHCCCCCCEEEEEECCEECCCCHHHHHHHHHHHHHCCCCCEEEEE NFDLNEPFDNEPKNINSKTTKFITEKIEEKNNEQLHKNRMGIISHVQTPDVINKANISNI CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHCCCCCCCC NKENSKNSLEKNSAKSISCEKPKSGEQKSEKVRFKRIGVKTRLIDVHKISRNYMQQVKEL CCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHEEHHHHHHHHHHHHHHHHH SNNDSTYINALLNLETAINEYGKEYDIEDILKHFLKQFGNRYKYKVWMMMKRKDGVINDY CCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCC DLIWEGRFKDWYSHKYKKNYTTTKEKYGEKIRLAGKNFDFNASKNVKDEEEEKKEKEKTE EEEEECCCHHHHHHHHCCCCCCCHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHH KERKLQLKRQQEYIERLFRQEEQERKERIRRREEEKAKLRMEVKEEIRSYVGSIENGDSS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GDIAKLYPLYEESRGDNIAVRPPRPQINTNFEGFKTTKGLSLASLGIMLQYQEQDPDKEK CCCEEECCHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHEEEEECCCCCCHHH ILMQNAKGETI HHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA