Click here to switch to the map view.

The map label for this gene is bdr_1

Identifier: 203283913

GI number: 203283913

Start: 241

End: 765

Strand: Direct

Name: bdr_1

Synonym: BDU_15001

Alternate gene names: NA

Gene position: 241-765 (Clockwise)

Preceding gene: NA

Following gene: 203283916

Centisome position: 1.6

GC content: 22.86

Gene sequence:

>525_bases
ATGGAACATATGATACAGCCAGTAGTAACAAGACAAATGGTCTTAAATGAGCTCGTAAAAGTCGGGATGGATAGAGATAT
TGCGGACGATTTATCTTATAGATACTATAAAAATGAACTTACTACTAAAGATCTTGAACTTCTAAAAATGGCATTCAAAT
CAGATATTAGAGATCTCAATAATAAAATTGATACTGTTGAAAATAACTTAAATATTAAAATTGACACTAAATTTAATGAA
CTTGATAATAAAATTGATATTATTGAAAATAACTTAAATATTAAAATTGACACTAAATTTAATGAACTTGATAATAAAAT
TGATATTATTGAAAATAACTTAAAATCAGAGATTTCTCTTGTAAGAAAAGATATGGATCTTATAAGAAAAGATATGGAAA
TTAACAAAACAGAACTTAATAGTAAATTAAAATTAAATAATTGGATGCTTGGAACTATTATTACAATTAACGTAGGAATT
CTTTTAACATTAATCTCAATAATAAACTCAATTATAAATAAGTAA

Upstream 100 bases:

>100_bases
AACAATACATACTACTAAATCATACATCAAACTAAATTTTATTCATTTTCACTTAACAATAAACCCTAAAAACACTATAA
TATTATATAAGGAGATTTTC

Downstream 100 bases:

>100_bases
ACATGAATTACTAATTCTACAAATCTTTCATTAGCAAAATCAATAATTCATATTAATCTCTAGTTAACTTTGAATAACCT
CTGGCTGAATAACTCCTGGC

Product: bdr protein

Products: NA

Alternate protein names: Bdr Proitein; Repeat Motif-Containing Protein; Repeat Motif-Containing Gene Protein; Repeat Motif-Containing Gene; ORF15/Rep+; Repeat Motif Gene A Protein; RepH21 Gene Homologue

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MEHMIQPVVTRQMVLNELVKVGMDRDIADDLSYRYYKNELTTKDLELLKMAFKSDIRDLNNKIDTVENNLNIKIDTKFNE
LDNKIDIIENNLNIKIDTKFNELDNKIDIIENNLKSEISLVRKDMDLIRKDMEINKTELNSKLKLNNWMLGTIITINVGI
LLTLISIINSIINK

Sequences:

>Translated_174_residues
MEHMIQPVVTRQMVLNELVKVGMDRDIADDLSYRYYKNELTTKDLELLKMAFKSDIRDLNNKIDTVENNLNIKIDTKFNE
LDNKIDIIENNLNIKIDTKFNELDNKIDIIENNLKSEISLVRKDMDLIRKDMEINKTELNSKLKLNNWMLGTIITINVGI
LLTLISIINSIINK
>Mature_174_residues
MEHMIQPVVTRQMVLNELVKVGMDRDIADDLSYRYYKNELTTKDLELLKMAFKSDIRDLNNKIDTVENNLNIKIDTKFNE
LDNKIDIIENNLNIKIDTKFNELDNKIDIIENNLKSEISLVRKDMDLIRKDMEINKTELNSKLKLNNWMLGTIITINVGI
LLTLISIINSIINK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20337; Mature: 20337

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEHMIQPVVTRQMVLNELVKVGMDRDIADDLSYRYYKNELTTKDLELLKMAFKSDIRDLN
CCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
NKIDTVENNLNIKIDTKFNELDNKIDIIENNLNIKIDTKFNELDNKIDIIENNLKSEISL
HHHHHHCCCCEEEEECCHHHHCCCEEEEECCCEEEEECCHHHHCCHHHHHHHHHHHHHHH
VRKDMDLIRKDMEINKTELNSKLKLNNWMLGTIITINVGILLTLISIINSIINK
HHHHHHHHHHHHCCCHHHCCCEEEECCEEEHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEHMIQPVVTRQMVLNELVKVGMDRDIADDLSYRYYKNELTTKDLELLKMAFKSDIRDLN
CCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
NKIDTVENNLNIKIDTKFNELDNKIDIIENNLNIKIDTKFNELDNKIDIIENNLKSEISL
HHHHHHCCCCEEEEECCHHHHCCCEEEEECCCEEEEECCHHHHCCHHHHHHHHHHHHHHH
VRKDMDLIRKDMEINKTELNSKLKLNNWMLGTIITINVGILLTLISIINSIINK
HHHHHHHHHHHHCCCHHHCCCEEEECCEEEHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA