Definition Acaryochloris marina MBIC11017 chromosome, complete genome.
Accession NC_009925
Length 6,503,724

Click here to switch to the map view.

The map label for this gene is 158338542

Identifier: 158338542

GI number: 158338542

Start: 5502138

End: 5502254

Strand: Direct

Name: 158338542

Synonym: AM1_5444

Alternate gene names: NA

Gene position: 5502138-5502254 (Clockwise)

Preceding gene: 158338541

Following gene: 158338543

Centisome position: 84.6

GC content: 54.7

Gene sequence:

>117_bases
ATGGTGTCCTGCGCTGTTGATGGTCAAGTCGTCGAGGCCTATGCAGAAGGGATATCCACCTATCATCACTCCACTCAACC
TGGCTCTCCAGACAAGCCTCCCTTACCCATGGCCTAG

Upstream 100 bases:

>100_bases
CCCTGCAAGGCGGCTGTATTTTACGAGCTCATATCCGACTCATCTCAAATGTCCTGGTGGCCTAGTTAACCAGGTTGAGT
GTCCGAGTTGTGATTATTTA

Downstream 100 bases:

>100_bases
GGGTTAACGCTAGTTCAGTCAGCCTTTCTAAAACCTAATTCAATCACCATTCCTCAGGAGTCAATGCCATGATGCGCGCA
GAAGAAATCATGACCCGAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 38; Mature: 38

Protein sequence:

>38_residues
MVSCAVDGQVVEAYAEGISTYHHSTQPGSPDKPPLPMA

Sequences:

>Translated_38_residues
MVSCAVDGQVVEAYAEGISTYHHSTQPGSPDKPPLPMA
>Mature_38_residues
MVSCAVDGQVVEAYAEGISTYHHSTQPGSPDKPPLPMA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 3971; Mature: 3971

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
7.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSCAVDGQVVEAYAEGISTYHHSTQPGSPDKPPLPMA
CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVSCAVDGQVVEAYAEGISTYHHSTQPGSPDKPPLPMA
CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA