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The map label for this gene is ycjD [H]

Identifier: 158337456

GI number: 158337456

Start: 4360308

End: 4360682

Strand: Direct

Name: ycjD [H]

Synonym: AM1_4335

Alternate gene names: 158337456

Gene position: 4360308-4360682 (Clockwise)

Preceding gene: 158337455

Following gene: 158337459

Centisome position: 67.04

GC content: 50.93

Gene sequence:

>375_bases
ATGGCAAAATCTAGTGATCGAATTCGAGGGACTACTCGTAAGGTTGAGCGGGCAGCTCGTCAACTTCGTCACCATCCGAC
TGATGCAGAAGCGTTGTTGTGGGAAGCTTTGCGGAATCGGCAGCTCAATGGGCTGCGCTGGCGACGACAACATCCGATTG
GTCGCTTTATCGTGGATTTTTACTGTCCTTCATGCCGTTTAGTTGTGGAGGTTGATGGCGAGATACATCTGCAGCAACAG
GATTACGATTTGGCTAGAACGGCCCATTTGGAGGAGTATGGGCTTACCGTTCTGCGCTTTAGTAATGCGGCAGTGGAGTC
CAATCTACAGGAGGTTTTGGCGGCGATTTGTCACCATATATCGAGTCGAGGGTGA

Upstream 100 bases:

>100_bases
GCTGAGATTTTCAGTTGTTCTGGGGGGGGATAATGCAGGGTTGGATAGGGTTTGGGGTTTGAAGGCAGAGTGTTGGAAGA
GCTTTGGATGGGGGTAGGTT

Downstream 100 bases:

>100_bases
TGAGTGGTGCAGGGTATTTTGGCCCTCACCCCCCGACCCCCTCTCCCAACCTTGGGCGAAGGGGAGAATGCAGCGTATCA
GTGAATTCTTACTCCCCTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 123

Protein sequence:

>124_residues
MAKSSDRIRGTTRKVERAARQLRHHPTDAEALLWEALRNRQLNGLRWRRQHPIGRFIVDFYCPSCRLVVEVDGEIHLQQQ
DYDLARTAHLEEYGLTVLRFSNAAVESNLQEVLAAICHHISSRG

Sequences:

>Translated_124_residues
MAKSSDRIRGTTRKVERAARQLRHHPTDAEALLWEALRNRQLNGLRWRRQHPIGRFIVDFYCPSCRLVVEVDGEIHLQQQ
DYDLARTAHLEEYGLTVLRFSNAAVESNLQEVLAAICHHISSRG
>Mature_123_residues
AKSSDRIRGTTRKVERAARQLRHHPTDAEALLWEALRNRQLNGLRWRRQHPIGRFIVDFYCPSCRLVVEVDGEIHLQQQD
YDLARTAHLEEYGLTVLRFSNAAVESNLQEVLAAICHHISSRG

Specific function: Unknown

COG id: COG2852

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1162 and to HI_0925 [H]

Homologues:

Organism=Escherichia coli, GI1787546, Length=111, Percent_Identity=43.2432432432432, Blast_Score=91, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004603
- InterPro:   IPR007569
- InterPro:   IPR011335 [H]

Pfam domain/function: PF04480 DUF559 [H]

EC number: NA

Molecular weight: Translated: 14341; Mature: 14210

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKSSDRIRGTTRKVERAARQLRHHPTDAEALLWEALRNRQLNGLRWRRQHPIGRFIVDF
CCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHH
YCPSCRLVVEVDGEIHLQQQDYDLARTAHLEEYGLTVLRFSNAAVESNLQEVLAAICHHI
CCCCCEEEEEECCEEEEECCCCHHHHHHHHHHHCEEEEEECCHHHHHHHHHHHHHHHHHH
SSRG
HCCC
>Mature Secondary Structure 
AKSSDRIRGTTRKVERAARQLRHHPTDAEALLWEALRNRQLNGLRWRRQHPIGRFIVDF
CCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHH
YCPSCRLVVEVDGEIHLQQQDYDLARTAHLEEYGLTVLRFSNAAVESNLQEVLAAICHHI
CCCCCEEEEEECCEEEEECCCCHHHHHHHHHHHCEEEEEECCHHHHHHHHHHHHHHHHHH
SSRG
HCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 8075395; 1364817 [H]