Click here to switch to the map view.

The map label for this gene is sqr

Identifier: 158333650

GI number: 158333650

Start: 432067

End: 433377

Strand: Direct

Name: sqr

Synonym: AM1_0452

Alternate gene names: NA

Gene position: 432067-433377 (Clockwise)

Preceding gene: 158333643

Following gene: 158333651

Centisome position: 6.64

GC content: 52.71

Gene sequence:

>1311_bases
ATGGCTCATATTGTTGTCATTGGAGCAGGATTGGCAGGATTGCCGACTGCCTATGAGTTGAGGTACCTGTTACCTAGTCA
GCATCAAATTACCCTGATCTCCAATACCTCTAAATTCACATTTATTCCATCCCTTCCTTGGGTCGCGCTAGGGCTGATCC
CCTTGGCTAAGATTCAGTTAGAACTGGAGGAGTTGGTGATTCAACAGGGAATAAGATGGCTCCCTGAAGCGGTGGTTCAC
CTGAATCCTCGGACTCAAACTGTTTATACAGATTCTCAGTCTTTGGCCTATGACTACGTCGTCATTGCCACCGGAGCCGA
GTTAGCCTTGGATACGGTATCCGGCCTGGGACCAGAGCAGGGCTTTACCCAGTCGATTTGCAATCCTCACCATGCTTTAA
TGGCCAACAGTGCTTGGCAAAATTTTTTACAGAATCCGGGTCCTTTAGTGGTGGGGGCAGTGCCCGGGGCAAGCTGTTTT
GGCCCTGCCTATGAGTTTGCCTTATTAGCCGATTACACTCTTCGCCAGCAAGGGTTGCGGGATCAAGTTTCCCTTACATT
TGTGACACCGGAACCCTATGCGGGGCATTTGGGGATTGGCGGCATGGCAAATTCTAGCCAGCTCGTGACGGAGTTGATGG
CGGCCAGAGACGTGGCAGTTTTGGAGAATACCGCCATCGACTCCGTCACATCTCAGGAGATTATTTTGGCCAATGGCGAC
GCGGTGCCCTTCCAGTACGCTATGTTGCTGCCGCAGTTTCGAGGGCCTGGCTTTGTTCGTGAGACAGCGGGGTTAGGGGA
TACCAAGGGGTTTCTGCCCATATTGCCCACCTATCAGCATCCTGTTTTTCCCTCAGTGTTTAGTGCAGGTGTTGTCACTC
AATTAGCACCACCAGAGGTAACTCCGATAGCAATCGGGGTGCCAAAAACTGGACAAATGGTTGAAGCAATGGGGATGGCA
GTGGCTCACAATATTGCCCTGGCCTTAGGGGCCATCTCAGATCAGCCTGTTACCCCCACCTTAGAAGCCATCTGCTTTGC
AGACTTTGGAGATACAGGATTACTCTTTTTGGCGGACCCCGTTCTGCCTGATCCAGTGACGGGACGGCGACGCCGCGCCA
TTACCCTAGGGGGGCGTTGGGTGGGTTGGTTGAAAACAGCATTTGAACGCTATTTTCTAGCCAAAATGCGCTGGGGAGCT
GCCGTCCCTTGGTTTGAGCGCTTGGGGCTTCGGGCCGCGGGTTTTTCTTTGTTAGAGGCCGCTCCTTCGACGGAACCTGA
CTCGGTACGCGAGGACGTCCTGATTCATTGA

Upstream 100 bases:

>100_bases
CTCCAAGCCTATGGAGATTTAGAAGAAGGCTAGCCCCCTTCAACCTGCGCAACTTAATTAATTGAAATCCTTTTCAGACC
GACCTTTGAGAGGTTTATAT

Downstream 100 bases:

>100_bases
GAGCTGACGCGTTCTTTCAATAGGCATACATGTTGATTCCCCTGCAATGGATCAACTTACTCTGCGAGCTAGCGCTTTAT
GCTTTTCAGTTGACCAAGGG

Product: sulfide quinone reductase

Products: NA

Alternate protein names: Sulfide-Quinone Reductase; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Oxidoreductase; SulfideQuinone Oxidoreductase; Sulfide Quinone Reductase; NAD(FAD)-Dependent Dehydrogenase; Sulfide-Quinone Oxidoreductase; Fad-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Sulfide Dehydrogenase Flavoprotein Subunit; Pyridine Nucleotide-Disulphide Oxidoreductase; Sulfide Dehydrogenase; Quinone Reductase; FAD Dependent Oxidoreductase; Flavoprotein Reductase-Like Protein; FAD-Dependent Pyridine Nucleotide-Disulphideoxido Reductase; Dehydrogenase; Sulfide-Quinone Reductase Related Protein; Dehydrogenase/Reductase; NADH Dehydrogenase FAD-Containing Subunit; Sulfide Quinone Oxidoreductase-Like Protein; Sulfide Quinone-Rductase; Pyridine Nucleotide-Disulfide Oxidoreductase Family Protein

Number of amino acids: Translated: 436; Mature: 435

Protein sequence:

>436_residues
MAHIVVIGAGLAGLPTAYELRYLLPSQHQITLISNTSKFTFIPSLPWVALGLIPLAKIQLELEELVIQQGIRWLPEAVVH
LNPRTQTVYTDSQSLAYDYVVIATGAELALDTVSGLGPEQGFTQSICNPHHALMANSAWQNFLQNPGPLVVGAVPGASCF
GPAYEFALLADYTLRQQGLRDQVSLTFVTPEPYAGHLGIGGMANSSQLVTELMAARDVAVLENTAIDSVTSQEIILANGD
AVPFQYAMLLPQFRGPGFVRETAGLGDTKGFLPILPTYQHPVFPSVFSAGVVTQLAPPEVTPIAIGVPKTGQMVEAMGMA
VAHNIALALGAISDQPVTPTLEAICFADFGDTGLLFLADPVLPDPVTGRRRRAITLGGRWVGWLKTAFERYFLAKMRWGA
AVPWFERLGLRAAGFSLLEAAPSTEPDSVREDVLIH

Sequences:

>Translated_436_residues
MAHIVVIGAGLAGLPTAYELRYLLPSQHQITLISNTSKFTFIPSLPWVALGLIPLAKIQLELEELVIQQGIRWLPEAVVH
LNPRTQTVYTDSQSLAYDYVVIATGAELALDTVSGLGPEQGFTQSICNPHHALMANSAWQNFLQNPGPLVVGAVPGASCF
GPAYEFALLADYTLRQQGLRDQVSLTFVTPEPYAGHLGIGGMANSSQLVTELMAARDVAVLENTAIDSVTSQEIILANGD
AVPFQYAMLLPQFRGPGFVRETAGLGDTKGFLPILPTYQHPVFPSVFSAGVVTQLAPPEVTPIAIGVPKTGQMVEAMGMA
VAHNIALALGAISDQPVTPTLEAICFADFGDTGLLFLADPVLPDPVTGRRRRAITLGGRWVGWLKTAFERYFLAKMRWGA
AVPWFERLGLRAAGFSLLEAAPSTEPDSVREDVLIH
>Mature_435_residues
AHIVVIGAGLAGLPTAYELRYLLPSQHQITLISNTSKFTFIPSLPWVALGLIPLAKIQLELEELVIQQGIRWLPEAVVHL
NPRTQTVYTDSQSLAYDYVVIATGAELALDTVSGLGPEQGFTQSICNPHHALMANSAWQNFLQNPGPLVVGAVPGASCFG
PAYEFALLADYTLRQQGLRDQVSLTFVTPEPYAGHLGIGGMANSSQLVTELMAARDVAVLENTAIDSVTSQEIILANGDA
VPFQYAMLLPQFRGPGFVRETAGLGDTKGFLPILPTYQHPVFPSVFSAGVVTQLAPPEVTPIAIGVPKTGQMVEAMGMAV
AHNIALALGAISDQPVTPTLEAICFADFGDTGLLFLADPVLPDPVTGRRRRAITLGGRWVGWLKTAFERYFLAKMRWGAA
VPWFERLGLRAAGFSLLEAAPSTEPDSVREDVLIH

Specific function: Unknown

COG id: COG0446

COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI10864011, Length=245, Percent_Identity=26.1224489795918, Blast_Score=69, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46832; Mature: 46700

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHIVVIGAGLAGLPTAYELRYLLPSQHQITLISNTSKFTFIPSLPWVALGLIPLAKIQL
CEEEEEEECCCCCCCCHHEEEEECCCCCEEEEEECCCEEEEECCCHHHHHHHHHHHHHHH
ELEELVIQQGIRWLPEAVVHLNPRTQTVYTDSQSLAYDYVVIATGAELALDTVSGLGPEQ
HHHHHHHHHHHHHHHHHHEEECCCCEEEEECCCCCEEEEEEEECCCHHHHHHHHCCCCCC
GFTQSICNPHHALMANSAWQNFLQNPGPLVVGAVPGASCFGPAYEFALLADYTLRQQGLR
CCHHHHCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCC
DQVSLTFVTPEPYAGHLGIGGMANSSQLVTELMAARDVAVLENTAIDSVTSQEIILANGD
CCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHCCHHCCCCCCEEEEECCC
AVPFQYAMLLPQFRGPGFVRETAGLGDTKGFLPILPTYQHPVFPSVFSAGVVTQLAPPEV
CCCHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHEECCCCCC
TPIAIGVPKTGQMVEAMGMAVAHNIALALGAISDQPVTPTLEAICFADFGDTGLLFLADP
CEEEEECCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHEEEEECCCCCCEEEEECC
VLPDPVTGRRRRAITLGGRWVGWLKTAFERYFLAKMRWGAAVPWFERLGLRAAGFSLLEA
CCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHCHHHHHC
APSTEPDSVREDVLIH
CCCCCCHHHHHCCCCC
>Mature Secondary Structure 
AHIVVIGAGLAGLPTAYELRYLLPSQHQITLISNTSKFTFIPSLPWVALGLIPLAKIQL
EEEEEEECCCCCCCCHHEEEEECCCCCEEEEEECCCEEEEECCCHHHHHHHHHHHHHHH
ELEELVIQQGIRWLPEAVVHLNPRTQTVYTDSQSLAYDYVVIATGAELALDTVSGLGPEQ
HHHHHHHHHHHHHHHHHHEEECCCCEEEEECCCCCEEEEEEEECCCHHHHHHHHCCCCCC
GFTQSICNPHHALMANSAWQNFLQNPGPLVVGAVPGASCFGPAYEFALLADYTLRQQGLR
CCHHHHCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCC
DQVSLTFVTPEPYAGHLGIGGMANSSQLVTELMAARDVAVLENTAIDSVTSQEIILANGD
CCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHCCHHCCCCCCEEEEECCC
AVPFQYAMLLPQFRGPGFVRETAGLGDTKGFLPILPTYQHPVFPSVFSAGVVTQLAPPEV
CCCHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHEECCCCCC
TPIAIGVPKTGQMVEAMGMAVAHNIALALGAISDQPVTPTLEAICFADFGDTGLLFLADP
CEEEEECCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHEEEEECCCCCCEEEEECC
VLPDPVTGRRRRAITLGGRWVGWLKTAFERYFLAKMRWGAAVPWFERLGLRAAGFSLLEA
CCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHCHHHHHC
APSTEPDSVREDVLIH
CCCCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA