| Definition | Clostridium botulinum A str. Hall, complete genome. |
|---|---|
| Accession | NC_009698 |
| Length | 3,760,560 |
Click here to switch to the map view.
The map label for this gene is 153937679
Identifier: 153937679
GI number: 153937679
Start: 2026500
End: 2028719
Strand: Direct
Name: 153937679
Synonym: CLC_1912
Alternate gene names: NA
Gene position: 2026500-2028719 (Clockwise)
Preceding gene: 153936089
Following gene: 153937870
Centisome position: 53.89
GC content: 28.92
Gene sequence:
>2220_bases ATGAAAAAAAATCTTTTACCAAAACTGGTCTTACCAATTTTAGTTGCATCATCTACTATTATAGGAGCAAATCAAACCAA GGTTAGTGCTGCGCCTATAAAGGATGCAGAAGTAAAATTAACTCAACCTGATGGACAAGTTGTTCAATGTTACGCCTCAG GAGATGAATTCTATAACTATTTACATGATTCAAATGGAAGAGCTATAGTTAAGGATGAAAAAACGGGATATTATGTCTAT GGAAAATATGTAAAAAATAAAGTACAACCATCTAGAGAAAGAGTAACAAAGAGCAATATTGAAACTTTAAAACAAATTGA TGCTGATAGCAAAGTTAACATGAAAGATGTTAAAGCTCCAAAAAATGAAATTGAAAAACAAAGAGAATTTCTTAATGCAA ATAACCCAATCCAAAGGACAAAAAATATTGGACAACTTAATAATATAGTTATTTTTATAAAATTTAGCGATCAAGATGAA ATAACAAGAGATTTTTCTACCTATAATAAACAATTTAATTCAAAAAACCAGGCATCTTTAAATAATTATTACAAAGAAGT ATCCTATAACAAACTAGATGTTAATACAACTTTCTATCCTAAACCTAATGGAGATAAAGTTTTAAGCTATACTGACAGTC ACCCAAGAAGTTATTATACTAATGTTCCACAAAATGAAAGAGCAGCAAGAGAGCAAACCTTACTTAAAAATGCTGTTGAT TCTGTTAAAAGTGAAATCCCAAGTGATTTAAATGTAGACTCAGATAATGACGGCAAAGTTGATAATGTGTGTTTTATTGT AAAGGGAGCAACAACTGGATGGTCATCACTTTTATGGCCTCATAAATGGAATATGTTCTATCAAGATGTAAGAATAAATG GTAAAAAAATAGATACTTATAATTTCCAATTGGAAGATTTTATAGGTGATAATGGTATTGGAGTTCTAAGTCATGAAATG TTCCATACCTTAGGAGCACCAGATCTTTATCACTATAATTATGATGGCAAAGTTGCTGTAGGACCATGGGATGTAATGGA TCAGACTGCATCTATTCCTCAATCCATGGGGACATACATGAAAATGTATTACGGTAAATGGCTTAATAACATAAATGAAA TAAATAAACCAGGAAAATATTCAATAAACAAAATAGGCACTGAAGCTAATAACAGTTATATTATAAAGTCACCAAATTCA AATAAAGAATATTTTGTAGTAGAATACAGAAAAAATGAAGGACAATATGAATCAAATTTACCTGGAGAAGGGTTATTAGT TTATAGAATTAATACAGCATTTCAAGGTAGAGGTAATTCTAGTGGTAATGATGAAGTATATTTATACAGACAAAATGGAA GTTTAAATAATGTCGGAGATATATCTAGAGCAGCTTTAGCTTATAATAAAACAAGTATAAATTCAAAGGAATTATTCTTA TCAGATGGAAGTGATAGTGGAATAAGTTTAGAAAATATTAATGTATTAGGTAACACTGCTAACTTTAATGTTGTTATAAA CGGACAAACTGCTGATAGTAAAACTGTTGATAAAAACTTACCACTTAAACACCAAGTGAATTTTGATGATACTAAAACAT TATCAAACACTGAAAATATAATTGGTGAATGTGTATATGGAAAGAAAATTAATAATATAGAATTATATATAAATGGATAT AAATATATGGATGCTGAACGTAGCAAATTAAATGATCCAGGAAATAAATATAAAGGTTATGACTTATCTAAAGCTGCATT CAAATTTTCAATGGACTTTTCAAGATGGTATGAATCTAATTATCCATACGAAATAAAGGTAACTACAGAAGATGGACAAA GGATTTCAATTAAAAAAGGTTATTTAAGAGTAAAAAAACAGGAAAACAGCAAGAATTTAGCTTTCAAAGGTAATTTCAAC TTAGGAAATAATGAAGCTTTATATGGCGCTAGAACTTTAACTGGTGAATGCGTTTATGGAAAAGGAATTAAGGCAGTTAA ATTATATGTCAACGGATATCCATATGTTGATGCAAAAAGATATGCAATAAACGATCCACAAAATAAATATACCGGATATG ACTTATCAAAGGCAGGATTTAAATTTGATTTATATTTCTCAAATTGGCATAATTATGATTATCCTTACAAAGTAGTAGCA ATAGACTCTGAAGGAAATGAAATGTTAATTAAAGAAGGTCATTTAAAGGTTAGAAATTAG
Upstream 100 bases:
>100_bases TAGATAAAAATAATATATCCAATTATAAACCATTAAAAGGTATATATAAAAATCTAGTTGAACCAGATTTTTCAATATAA AATAAAAAGGGGGAAAAATA
Downstream 100 bases:
>100_bases TATTAAAAATTAAAATACTTTAAACGCTGCGTTAAGCATATGTAAGTAGGTAAATTTGTTCTTACACAAATTTACCTACA TTTTTTATAGCATAAACAAA
Product: hypothetical protein
Products: NA
Alternate protein names: M6 Family Metalloprotease Domain Protein; M6 Family Metalloprotease Domain-Containing Protein; Peptidase M6 Family; Protease; Peptidase M6 Immune Inhibitor A; Peptidase S8 And; Cell Surface Protein; M6 Family Peptidase
Number of amino acids: Translated: 739; Mature: 739
Protein sequence:
>739_residues MKKNLLPKLVLPILVASSTIIGANQTKVSAAPIKDAEVKLTQPDGQVVQCYASGDEFYNYLHDSNGRAIVKDEKTGYYVY GKYVKNKVQPSRERVTKSNIETLKQIDADSKVNMKDVKAPKNEIEKQREFLNANNPIQRTKNIGQLNNIVIFIKFSDQDE ITRDFSTYNKQFNSKNQASLNNYYKEVSYNKLDVNTTFYPKPNGDKVLSYTDSHPRSYYTNVPQNERAAREQTLLKNAVD SVKSEIPSDLNVDSDNDGKVDNVCFIVKGATTGWSSLLWPHKWNMFYQDVRINGKKIDTYNFQLEDFIGDNGIGVLSHEM FHTLGAPDLYHYNYDGKVAVGPWDVMDQTASIPQSMGTYMKMYYGKWLNNINEINKPGKYSINKIGTEANNSYIIKSPNS NKEYFVVEYRKNEGQYESNLPGEGLLVYRINTAFQGRGNSSGNDEVYLYRQNGSLNNVGDISRAALAYNKTSINSKELFL SDGSDSGISLENINVLGNTANFNVVINGQTADSKTVDKNLPLKHQVNFDDTKTLSNTENIIGECVYGKKINNIELYINGY KYMDAERSKLNDPGNKYKGYDLSKAAFKFSMDFSRWYESNYPYEIKVTTEDGQRISIKKGYLRVKKQENSKNLAFKGNFN LGNNEALYGARTLTGECVYGKGIKAVKLYVNGYPYVDAKRYAINDPQNKYTGYDLSKAGFKFDLYFSNWHNYDYPYKVVA IDSEGNEMLIKEGHLKVRN
Sequences:
>Translated_739_residues MKKNLLPKLVLPILVASSTIIGANQTKVSAAPIKDAEVKLTQPDGQVVQCYASGDEFYNYLHDSNGRAIVKDEKTGYYVY GKYVKNKVQPSRERVTKSNIETLKQIDADSKVNMKDVKAPKNEIEKQREFLNANNPIQRTKNIGQLNNIVIFIKFSDQDE ITRDFSTYNKQFNSKNQASLNNYYKEVSYNKLDVNTTFYPKPNGDKVLSYTDSHPRSYYTNVPQNERAAREQTLLKNAVD SVKSEIPSDLNVDSDNDGKVDNVCFIVKGATTGWSSLLWPHKWNMFYQDVRINGKKIDTYNFQLEDFIGDNGIGVLSHEM FHTLGAPDLYHYNYDGKVAVGPWDVMDQTASIPQSMGTYMKMYYGKWLNNINEINKPGKYSINKIGTEANNSYIIKSPNS NKEYFVVEYRKNEGQYESNLPGEGLLVYRINTAFQGRGNSSGNDEVYLYRQNGSLNNVGDISRAALAYNKTSINSKELFL SDGSDSGISLENINVLGNTANFNVVINGQTADSKTVDKNLPLKHQVNFDDTKTLSNTENIIGECVYGKKINNIELYINGY KYMDAERSKLNDPGNKYKGYDLSKAAFKFSMDFSRWYESNYPYEIKVTTEDGQRISIKKGYLRVKKQENSKNLAFKGNFN LGNNEALYGARTLTGECVYGKGIKAVKLYVNGYPYVDAKRYAINDPQNKYTGYDLSKAGFKFDLYFSNWHNYDYPYKVVA IDSEGNEMLIKEGHLKVRN >Mature_739_residues MKKNLLPKLVLPILVASSTIIGANQTKVSAAPIKDAEVKLTQPDGQVVQCYASGDEFYNYLHDSNGRAIVKDEKTGYYVY GKYVKNKVQPSRERVTKSNIETLKQIDADSKVNMKDVKAPKNEIEKQREFLNANNPIQRTKNIGQLNNIVIFIKFSDQDE ITRDFSTYNKQFNSKNQASLNNYYKEVSYNKLDVNTTFYPKPNGDKVLSYTDSHPRSYYTNVPQNERAAREQTLLKNAVD SVKSEIPSDLNVDSDNDGKVDNVCFIVKGATTGWSSLLWPHKWNMFYQDVRINGKKIDTYNFQLEDFIGDNGIGVLSHEM FHTLGAPDLYHYNYDGKVAVGPWDVMDQTASIPQSMGTYMKMYYGKWLNNINEINKPGKYSINKIGTEANNSYIIKSPNS NKEYFVVEYRKNEGQYESNLPGEGLLVYRINTAFQGRGNSSGNDEVYLYRQNGSLNNVGDISRAALAYNKTSINSKELFL SDGSDSGISLENINVLGNTANFNVVINGQTADSKTVDKNLPLKHQVNFDDTKTLSNTENIIGECVYGKKINNIELYINGY KYMDAERSKLNDPGNKYKGYDLSKAAFKFSMDFSRWYESNYPYEIKVTTEDGQRISIKKGYLRVKKQENSKNLAFKGNFN LGNNEALYGARTLTGECVYGKGIKAVKLYVNGYPYVDAKRYAINDPQNKYTGYDLSKAGFKFDLYFSNWHNYDYPYKVVA IDSEGNEMLIKEGHLKVRN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 83999; Mature: 83999
Theoretical pI: Translated: 9.08; Mature: 9.08
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKNLLPKLVLPILVASSTIIGANQTKVSAAPIKDAEVKLTQPDGQVVQCYASGDEFYNY CCCCCCHHHHHHHHHHCCEEECCCCCEEEECCCCCCEEEEECCCCCEEEEEECCHHHHHH LHDSNGRAIVKDEKTGYYVYGKYVKNKVQPSRERVTKSNIETLKQIDADSKVNMKDVKAP HCCCCCCEEEEECCCCEEEEEHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHCCCC KNEIEKQREFLNANNPIQRTKNIGQLNNIVIFIKFSDQDEITRDFSTYNKQFNSKNQASL HHHHHHHHHHHCCCCCHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCHHHH NNYYKEVSYNKLDVNTTFYPKPNGDKVLSYTDSHPRSYYTNVPQNERAAREQTLLKNAVD HHHHHHCCCCEEECCEEECCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHH SVKSEIPSDLNVDSDNDGKVDNVCFIVKGATTGWSSLLWPHKWNMFYQDVRINGKKIDTY HHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHCCCCCCCCEEEEEEEECCEEEEEE NFQLEDFIGDNGIGVLSHEMFHTLGAPDLYHYNYDGKVAVGPWDVMDQTASIPQSMGTYM EEEEHHHCCCCCCEEHHHHHHHHCCCCCEEEECCCCEEEECCHHHHHHHHHCHHHHHHHH KMYYGKWLNNINEINKPGKYSINKIGTEANNSYIIKSPNSNKEYFVVEYRKNEGQYESNL HHHHHHHHHHHHHCCCCCCEEHHCCCCCCCCCEEEECCCCCCCEEEEEEECCCCCCCCCC PGEGLLVYRINTAFQGRGNSSGNDEVYLYRQNGSLNNVGDISRAALAYNKTSINSKELFL CCCCEEEEEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCHHHHHEEECCCCCCCCEEEE SDGSDSGISLENINVLGNTANFNVVINGQTADSKTVDKNLPLKHQVNFDDTKTLSNTENI ECCCCCCEEEEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHH IGECVYGKKINNIELYINGYKYMDAERSKLNDPGNKYKGYDLSKAAFKFSMDFSRWYESN HHEEECCCCCCEEEEEEECEEEECCHHHHCCCCCCCCCCCCCCHHEEEEECCHHHHHCCC YPYEIKVTTEDGQRISIKKGYLRVKKQENSKNLAFKGNFNLGNNEALYGARTLTGECVYG CCEEEEEECCCCCEEEEEECEEEEEECCCCCCEEEEECCCCCCCCEEEEEEEECCCEEEC KGIKAVKLYVNGYPYVDAKRYAINDPQNKYTGYDLSKAGFKFDLYFSNWHNYDYPYKVVA CCCEEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEE IDSEGNEMLIKEGHLKVRN EECCCCEEEEECCCEEECC >Mature Secondary Structure MKKNLLPKLVLPILVASSTIIGANQTKVSAAPIKDAEVKLTQPDGQVVQCYASGDEFYNY CCCCCCHHHHHHHHHHCCEEECCCCCEEEECCCCCCEEEEECCCCCEEEEEECCHHHHHH LHDSNGRAIVKDEKTGYYVYGKYVKNKVQPSRERVTKSNIETLKQIDADSKVNMKDVKAP HCCCCCCEEEEECCCCEEEEEHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHCCCC KNEIEKQREFLNANNPIQRTKNIGQLNNIVIFIKFSDQDEITRDFSTYNKQFNSKNQASL HHHHHHHHHHHCCCCCHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCHHHH NNYYKEVSYNKLDVNTTFYPKPNGDKVLSYTDSHPRSYYTNVPQNERAAREQTLLKNAVD HHHHHHCCCCEEECCEEECCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHH SVKSEIPSDLNVDSDNDGKVDNVCFIVKGATTGWSSLLWPHKWNMFYQDVRINGKKIDTY HHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHCCCCCCCCEEEEEEEECCEEEEEE NFQLEDFIGDNGIGVLSHEMFHTLGAPDLYHYNYDGKVAVGPWDVMDQTASIPQSMGTYM EEEEHHHCCCCCCEEHHHHHHHHCCCCCEEEECCCCEEEECCHHHHHHHHHCHHHHHHHH KMYYGKWLNNINEINKPGKYSINKIGTEANNSYIIKSPNSNKEYFVVEYRKNEGQYESNL HHHHHHHHHHHHHCCCCCCEEHHCCCCCCCCCEEEECCCCCCCEEEEEEECCCCCCCCCC PGEGLLVYRINTAFQGRGNSSGNDEVYLYRQNGSLNNVGDISRAALAYNKTSINSKELFL CCCCEEEEEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCHHHHHEEECCCCCCCCEEEE SDGSDSGISLENINVLGNTANFNVVINGQTADSKTVDKNLPLKHQVNFDDTKTLSNTENI ECCCCCCEEEEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHH IGECVYGKKINNIELYINGYKYMDAERSKLNDPGNKYKGYDLSKAAFKFSMDFSRWYESN HHEEECCCCCCEEEEEEECEEEECCHHHHCCCCCCCCCCCCCCHHEEEEECCHHHHHCCC YPYEIKVTTEDGQRISIKKGYLRVKKQENSKNLAFKGNFNLGNNEALYGARTLTGECVYG CCEEEEEECCCCCEEEEEECEEEEEECCCCCCEEEEECCCCCCCCEEEEEEEECCCEEEC KGIKAVKLYVNGYPYVDAKRYAINDPQNKYTGYDLSKAGFKFDLYFSNWHNYDYPYKVVA CCCEEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEE IDSEGNEMLIKEGHLKVRN EECCCCEEEEECCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA