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The map label for this gene is ftsY [H]

Identifier: 153937568

GI number: 153937568

Start: 2426509

End: 2427420

Strand: Reverse

Name: ftsY [H]

Synonym: CLC_2299

Alternate gene names: 153937568

Gene position: 2427420-2426509 (Counterclockwise)

Preceding gene: 153936718

Following gene: 153935263

Centisome position: 64.55

GC content: 32.13

Gene sequence:

>912_bases
ATGTTTGGAAAATTTTTTGACAAATTAAAAGAAGGATTAACAAAAACTAAGGATGGATTTACAGATAAGATAAGTAGTGT
ATTAAATTTAGCTGTAACTATAGATGAAGATTTATATGAAGAATTAGAAGAAATACTTGTTACTGCTGATATAGGAGTAG
ATACTTCCATAAAAATCATAGATAGATTGAGAGAAAGAGTAAAGGAAGAAAAAATAAAGGATCCAGCAGAAATAAAACCT
TGTCTTAAAAGAGTAATATTACAAATACTAGGAGAAGAAAAAGGTTCTATAACACCAGACACTACTCCAAAAGTTATGCT
TATAATTGGAGTTAACGGTGTAGGAAAAACTACCTCCATAGGAAAAGTTTCAGCAAAGTTAAAAAATCAAGGCTATAAGG
TTATAATGGCTGCAGCAGATACCTTTAGAGCAGCAGCTATAGATCAATTAGAAGTATGGAGCAGTAGAGCTAAAGTAGAT
ATAATAAAACACCAGGAAGGATCAGATCCAGGGGCAGTAGTTTTTGATGCAGTTCAAGCAGCTAAATCAAGAAAAGCTGA
TGTATTAATATGTGATACTGCAGGAAGATTGCATAACAAAAAGAATTTGATGAATGAGCTTTCAAAGATAAACAAAATTT
TAGAAAGAGAATATGGTGATGCCTCTAAAGAAACCTTATTAGTTTTAGATGCTACCACAGGCCAAAATGCTGTTATACAA
GCTAAAGAATTTATGTCAGCTTGTCCTATAGATGGTATAATACTTACTAAGTTAGATGGTACAGCAAAAGGTGGGGTAGT
AATATCTATAAAAGACCAACTGGATATACCAGTAAAACTTATAGGAGTTGGAGAAGGCATAGAGGATCTACAGGAGTTTA
ATTCGGAAGAATTTGTAGAAGCATTATTTTAA

Upstream 100 bases:

>100_bases
AAGATGGTAGCCGCTCTAATACTCTCATTTTTAAGAAGGCGGGAGCATTAGAGAGGGTAGTCATCGGATAAAATAATAAG
CATATAAAAGGGGAGATACT

Downstream 100 bases:

>100_bases
TAATAAAATATTTAAAAATTAAACCTTTATAATAATATGTTTTAAATATAAAATAAATATTGATTAGCAATTAAAAAATA
TAATATAAAGATAAAAAACA

Product: signal recognition particle-docking protein FtsY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MFGKFFDKLKEGLTKTKDGFTDKISSVLNLAVTIDEDLYEELEEILVTADIGVDTSIKIIDRLRERVKEEKIKDPAEIKP
CLKRVILQILGEEKGSITPDTTPKVMLIIGVNGVGKTTSIGKVSAKLKNQGYKVIMAAADTFRAAAIDQLEVWSSRAKVD
IIKHQEGSDPGAVVFDAVQAAKSRKADVLICDTAGRLHNKKNLMNELSKINKILEREYGDASKETLLVLDATTGQNAVIQ
AKEFMSACPIDGIILTKLDGTAKGGVVISIKDQLDIPVKLIGVGEGIEDLQEFNSEEFVEALF

Sequences:

>Translated_303_residues
MFGKFFDKLKEGLTKTKDGFTDKISSVLNLAVTIDEDLYEELEEILVTADIGVDTSIKIIDRLRERVKEEKIKDPAEIKP
CLKRVILQILGEEKGSITPDTTPKVMLIIGVNGVGKTTSIGKVSAKLKNQGYKVIMAAADTFRAAAIDQLEVWSSRAKVD
IIKHQEGSDPGAVVFDAVQAAKSRKADVLICDTAGRLHNKKNLMNELSKINKILEREYGDASKETLLVLDATTGQNAVIQ
AKEFMSACPIDGIILTKLDGTAKGGVVISIKDQLDIPVKLIGVGEGIEDLQEFNSEEFVEALF
>Mature_303_residues
MFGKFFDKLKEGLTKTKDGFTDKISSVLNLAVTIDEDLYEELEEILVTADIGVDTSIKIIDRLRERVKEEKIKDPAEIKP
CLKRVILQILGEEKGSITPDTTPKVMLIIGVNGVGKTTSIGKVSAKLKNQGYKVIMAAADTFRAAAIDQLEVWSSRAKVD
IIKHQEGSDPGAVVFDAVQAAKSRKADVLICDTAGRLHNKKNLMNELSKINKILEREYGDASKETLLVLDATTGQNAVIQ
AKEFMSACPIDGIILTKLDGTAKGGVVISIKDQLDIPVKLIGVGEGIEDLQEFNSEEFVEALF

Specific function: Required for normal cell growth and morphogenesis; translocation of at least 1 protein is impaired in its absence [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI4507215, Length=294, Percent_Identity=30.2721088435374, Blast_Score=126, Evalue=2e-29,
Organism=Homo sapiens, GI226371618, Length=199, Percent_Identity=31.1557788944724, Blast_Score=116, Evalue=3e-26,
Organism=Homo sapiens, GI295424842, Length=334, Percent_Identity=29.0419161676647, Blast_Score=109, Evalue=4e-24,
Organism=Homo sapiens, GI23308697, Length=334, Percent_Identity=29.0419161676647, Blast_Score=109, Evalue=4e-24,
Organism=Homo sapiens, GI89061728, Length=135, Percent_Identity=30.3703703703704, Blast_Score=73, Evalue=3e-13,
Organism=Escherichia coli, GI1789874, Length=300, Percent_Identity=48.6666666666667, Blast_Score=263, Evalue=2e-71,
Organism=Escherichia coli, GI1788963, Length=299, Percent_Identity=33.1103678929766, Blast_Score=152, Evalue=3e-38,
Organism=Caenorhabditis elegans, GI17539958, Length=285, Percent_Identity=28.4210526315789, Blast_Score=118, Evalue=3e-27,
Organism=Caenorhabditis elegans, GI193206261, Length=296, Percent_Identity=28.7162162162162, Blast_Score=103, Evalue=1e-22,
Organism=Saccharomyces cerevisiae, GI6325345, Length=301, Percent_Identity=30.5647840531561, Blast_Score=150, Evalue=3e-37,
Organism=Saccharomyces cerevisiae, GI6320498, Length=231, Percent_Identity=28.5714285714286, Blast_Score=87, Evalue=2e-18,
Organism=Drosophila melanogaster, GI17647949, Length=287, Percent_Identity=29.616724738676, Blast_Score=123, Evalue=1e-28,
Organism=Drosophila melanogaster, GI24641198, Length=225, Percent_Identity=30.6666666666667, Blast_Score=98, Evalue=7e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 33091; Mature: 33091

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGKFFDKLKEGLTKTKDGFTDKISSVLNLAVTIDEDLYEELEEILVTADIGVDTSIKII
CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEECHHHHHHHHHHHHHHCCCCCCHHHHH
DRLRERVKEEKIKDPAEIKPCLKRVILQILGEEKGSITPDTTPKVMLIIGVNGVGKTTSI
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCC
GKVSAKLKNQGYKVIMAAADTFRAAAIDQLEVWSSRAKVDIIKHQEGSDPGAVVFDAVQA
HHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHH
AKSRKADVLICDTAGRLHNKKNLMNELSKINKILEREYGDASKETLLVLDATTGQNAVIQ
HHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEE
AKEFMSACPIDGIILTKLDGTAKGGVVISIKDQLDIPVKLIGVGEGIEDLQEFNSEEFVE
HHHHHHHCCCCCEEEEEECCCCCCCEEEEECCCCCCCEEEEECCCCHHHHHHCCHHHHHH
ALF
HHC
>Mature Secondary Structure
MFGKFFDKLKEGLTKTKDGFTDKISSVLNLAVTIDEDLYEELEEILVTADIGVDTSIKII
CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEECHHHHHHHHHHHHHHCCCCCCHHHHH
DRLRERVKEEKIKDPAEIKPCLKRVILQILGEEKGSITPDTTPKVMLIIGVNGVGKTTSI
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCC
GKVSAKLKNQGYKVIMAAADTFRAAAIDQLEVWSSRAKVDIIKHQEGSDPGAVVFDAVQA
HHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHH
AKSRKADVLICDTAGRLHNKKNLMNELSKINKILEREYGDASKETLLVLDATTGQNAVIQ
HHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEE
AKEFMSACPIDGIILTKLDGTAKGGVVISIKDQLDIPVKLIGVGEGIEDLQEFNSEEFVE
HHHHHHHCCCCCEEEEEECCCCCCCEEEEECCCCCCCEEEEECCCCHHHHHHCCHHHHHH
ALF
HHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7584053; 9384377; 8654983 [H]