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The map label for this gene is cmr3

Identifier: 153937358

GI number: 153937358

Start: 2245661

End: 2246860

Strand: Reverse

Name: cmr3

Synonym: CLC_2116

Alternate gene names: NA

Gene position: 2246860-2245661 (Counterclockwise)

Preceding gene: 153936213

Following gene: 153935145

Centisome position: 59.75

GC content: 22.33

Gene sequence:

>1200_bases
ATGAGCAAATATTTAGTTAAATTAAAGCCAGTAGACTCTTTTTTCTTTGGGGGAGAAAAAGTTTTTGACTTTTATGATGG
GAAAAAACCACTCAAAAATAATATAGTTAAGTCAAGAGAATTTCCTCAGCAAACATCAATTTTAGGAATGATTAGAAAAG
AAATATTAGTTTTAAATAGTTGTATAAGAGAAAAGTGGGATTATAGTAAAGATCAACAAAAAGAAAATAATAAGTTAATA
GGTGAAAGAAGTTTTAATATAACAGATAAAAATGAAGATTTTGGAATTATAAATAGTATATCTCCTGTTTTTATAATAGA
AGAAACTAAAGTTAGTGATAAGTTTTTAATTAAGATACCTAAGGATCACAACGTAAATGATAGCTTGAATAAATATAATC
CATTTAAATTTAATAATGATAAAGGTAATTGTTTGAAAGTTAAAACTAATTTAGTAAAAGAAGTATATCTGCCAATAGAT
TTTGAGGCTAAAAAGGGTTTATCAGAGGACTTTATAGATATTAAAACTGGAGATATTGTAAGTAAAAATAAAGTCTTTAT
AAGGGATTGTTCTATAGGTATAAAATTAGATGAAAATCATAAGACAAAAGATAACTCTTTATTTAGATTAGAAAAATATA
AGTTTAAGTATGATAATAGATATGAAAGAGCAGACAAATGTTTTGCTTTTATTTTAGATGTAGAAGAGGAAAAAGGAAAA
ATTACTTTTGAAAATTATAAAAATATAATTACTTTAGGTGGAGAAGGAAGTCACTTTTTCATATCTTTTGAAAAAGTTAA
TTTTGATATTAAGGAAAAAATAGATTTTATAAATAAAGAAAAGAATAGTTTTACTATAAAAGAAAGAGTACGAGTAGCTA
CTAATAAAGAAGAAATCAAAGAAACAAAACTCATATATAAAATAATTTTACTATCAGATACCTATATATCAAAAGATATT
TACGAAAAAAATTGCAATTATTCAATTTCAACTAAGATAGATTTTAGGAATCTATGCAGTGATAATTATTGCAAAAATAT
AGATGAGTATCATTATAAAAGATTAAAAAAAAGTGATAGTAAATATTCTCTTTTAGAAAAAGGATCAGTTTTGTTTGCTA
GTAAGGAAAATTATGATAGATTAATAAAAAATATAAATAATAGTAAATTTCAAAAAATAGGATATAACATATTTATTTAG

Upstream 100 bases:

>100_bases
GATAAGAATAAATGCATAGAGCAAATATATACTTATTTAAGATTTATTAAATTTATGGATGAAGATATAAATTTAGATAA
TTAAAAAGAAAGGTGAAAAG

Downstream 100 bases:

>100_bases
GGGGATTTAGAATGGATAATTTTAAAATATATACAATAAGATGTTTAACTAATATGCATGTTGGTAGTGGAGATGCAAGT
TATACACTTATAGATAATCA

Product: CRISPR-associated Cmr3 family protein

Products: NA

Alternate protein names: CRISPR-Associated Family Protein

Number of amino acids: Translated: 399; Mature: 398

Protein sequence:

>399_residues
MSKYLVKLKPVDSFFFGGEKVFDFYDGKKPLKNNIVKSREFPQQTSILGMIRKEILVLNSCIREKWDYSKDQQKENNKLI
GERSFNITDKNEDFGIINSISPVFIIEETKVSDKFLIKIPKDHNVNDSLNKYNPFKFNNDKGNCLKVKTNLVKEVYLPID
FEAKKGLSEDFIDIKTGDIVSKNKVFIRDCSIGIKLDENHKTKDNSLFRLEKYKFKYDNRYERADKCFAFILDVEEEKGK
ITFENYKNIITLGGEGSHFFISFEKVNFDIKEKIDFINKEKNSFTIKERVRVATNKEEIKETKLIYKIILLSDTYISKDI
YEKNCNYSISTKIDFRNLCSDNYCKNIDEYHYKRLKKSDSKYSLLEKGSVLFASKENYDRLIKNINNSKFQKIGYNIFI

Sequences:

>Translated_399_residues
MSKYLVKLKPVDSFFFGGEKVFDFYDGKKPLKNNIVKSREFPQQTSILGMIRKEILVLNSCIREKWDYSKDQQKENNKLI
GERSFNITDKNEDFGIINSISPVFIIEETKVSDKFLIKIPKDHNVNDSLNKYNPFKFNNDKGNCLKVKTNLVKEVYLPID
FEAKKGLSEDFIDIKTGDIVSKNKVFIRDCSIGIKLDENHKTKDNSLFRLEKYKFKYDNRYERADKCFAFILDVEEEKGK
ITFENYKNIITLGGEGSHFFISFEKVNFDIKEKIDFINKEKNSFTIKERVRVATNKEEIKETKLIYKIILLSDTYISKDI
YEKNCNYSISTKIDFRNLCSDNYCKNIDEYHYKRLKKSDSKYSLLEKGSVLFASKENYDRLIKNINNSKFQKIGYNIFI
>Mature_398_residues
SKYLVKLKPVDSFFFGGEKVFDFYDGKKPLKNNIVKSREFPQQTSILGMIRKEILVLNSCIREKWDYSKDQQKENNKLIG
ERSFNITDKNEDFGIINSISPVFIIEETKVSDKFLIKIPKDHNVNDSLNKYNPFKFNNDKGNCLKVKTNLVKEVYLPIDF
EAKKGLSEDFIDIKTGDIVSKNKVFIRDCSIGIKLDENHKTKDNSLFRLEKYKFKYDNRYERADKCFAFILDVEEEKGKI
TFENYKNIITLGGEGSHFFISFEKVNFDIKEKIDFINKEKNSFTIKERVRVATNKEEIKETKLIYKIILLSDTYISKDIY
EKNCNYSISTKIDFRNLCSDNYCKNIDEYHYKRLKKSDSKYSLLEKGSVLFASKENYDRLIKNINNSKFQKIGYNIFI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47040; Mature: 46909

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKYLVKLKPVDSFFFGGEKVFDFYDGKKPLKNNIVKSREFPQQTSILGMIRKEILVLNS
CCCEEEEEECCCHHHCCCCEEEEECCCCCCHHHHCHHCCCCCHHHHHHHHHHHHHHHHHH
CIREKWDYSKDQQKENNKLIGERSFNITDKNEDFGIINSISPVFIIEETKVSDKFLIKIP
HHHHHCCCCCHHHHHCCCEECCEECCCCCCCCCCCEEECCCCEEEEEECCCCCEEEEECC
KDHNVNDSLNKYNPFKFNNDKGNCLKVKTNLVKEVYLPIDFEAKKGLSEDFIDIKTGDIV
CCCCCCCCCCCCCCEEEECCCCCEEEEEHHHHHHEECCCCCHHHCCCCCCCEEEECCCEE
SKNKVFIRDCSIGIKLDENHKTKDNSLFRLEKYKFKYDNRYERADKCFAFILDVEEEKGK
ECCEEEEEEEEEEEEECCCCCCCCCCEEEEEEEEECCCCCHHHHHHEEEEEEEEECCCCC
ITFENYKNIITLGGEGSHFFISFEKVNFDIKEKIDFINKEKNSFTIKERVRVATNKEEIK
EEEECCCEEEEECCCCCEEEEEEEEECCCHHHHHHHHCCCCCCEEHHHHHHHHCCHHHHH
ETKLIYKIILLSDTYISKDIYEKNCNYSISTKIDFRNLCSDNYCKNIDEYHYKRLKKSDS
HHHHHEEEEEECCCHHHHHHHHCCCCEEEEEEECHHHHCCCHHHCCHHHHHHHHHHCCCC
KYSLLEKGSVLFASKENYDRLIKNINNSKFQKIGYNIFI
CHHHHHCCCEEEECCCCHHHHHHCCCCCHHHHCCCEEEC
>Mature Secondary Structure 
SKYLVKLKPVDSFFFGGEKVFDFYDGKKPLKNNIVKSREFPQQTSILGMIRKEILVLNS
CCEEEEEECCCHHHCCCCEEEEECCCCCCHHHHCHHCCCCCHHHHHHHHHHHHHHHHHH
CIREKWDYSKDQQKENNKLIGERSFNITDKNEDFGIINSISPVFIIEETKVSDKFLIKIP
HHHHHCCCCCHHHHHCCCEECCEECCCCCCCCCCCEEECCCCEEEEEECCCCCEEEEECC
KDHNVNDSLNKYNPFKFNNDKGNCLKVKTNLVKEVYLPIDFEAKKGLSEDFIDIKTGDIV
CCCCCCCCCCCCCCEEEECCCCCEEEEEHHHHHHEECCCCCHHHCCCCCCCEEEECCCEE
SKNKVFIRDCSIGIKLDENHKTKDNSLFRLEKYKFKYDNRYERADKCFAFILDVEEEKGK
ECCEEEEEEEEEEEEECCCCCCCCCCEEEEEEEEECCCCCHHHHHHEEEEEEEEECCCCC
ITFENYKNIITLGGEGSHFFISFEKVNFDIKEKIDFINKEKNSFTIKERVRVATNKEEIK
EEEECCCEEEEECCCCCEEEEEEEEECCCHHHHHHHHCCCCCCEEHHHHHHHHCCHHHHH
ETKLIYKIILLSDTYISKDIYEKNCNYSISTKIDFRNLCSDNYCKNIDEYHYKRLKKSDS
HHHHHEEEEEECCCHHHHHHHHCCCCEEEEEEECHHHHCCCHHHCCHHHHHHHHHHCCCC
KYSLLEKGSVLFASKENYDRLIKNINNSKFQKIGYNIFI
CHHHHHCCCEEEECCCCHHHHHHCCCCCHHHHCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA