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The map label for this gene is arnF [H]

Identifier: 153936912

GI number: 153936912

Start: 2372136

End: 2372492

Strand: Reverse

Name: arnF [H]

Synonym: CLC_2246

Alternate gene names: 153936912

Gene position: 2372492-2372136 (Counterclockwise)

Preceding gene: 153937374

Following gene: 153935455

Centisome position: 63.09

GC content: 28.01

Gene sequence:

>357_bases
ATGATATATTTAATATTGACATCGGTTTTTCTAGGAGCATTAGGACAAATATTGGTGAAATATGGAGCAGTTAATTTAAC
ATTAAATTTTTCACCAGCACACTTCTTACCTAGTATAGTATCTATATTAAAAAATATGCCAGTAATGGCAGGTATAATAT
CCTATGGAATTAGCTTTTTACTTTGGATAAAAGTATTGAGTAAAGTAGAATTAAGCTATGCATATCCAATGGTAAGTTTA
GGCTATGTATTAGTAATGATATTCTCTTACTTTTTCTTTAAAGAAAATATAACTCCTATAAGAATATTAGGAGTTGCATT
TATAATGATAGGAGTAATACTAGTAGCTAGAAGCTAG

Upstream 100 bases:

>100_bases
AAGGACAAGGTAGATATGCTTTCCCATTAATATTTATAATTATATACTTTTGGGTTTATTTTATTAAACATGGAATACTT
TTATTTAAGGAGTTAAAAAG

Downstream 100 bases:

>100_bases
ATTAATATATTATAAAGTTAATCATAATTATAAAGAAATTCTTATACTGGAAGCTATTTTAAGTAATTATTAAAATTAAA
CTTATGAGCAATAAATTTAG

Product: hypothetical protein

Products: NA

Alternate protein names: L-Ara4N-phosphoundecaprenol flippase subunit ArnF; Undecaprenyl phosphate-aminoarabinose flippase subunit ArnF [H]

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
MIYLILTSVFLGALGQILVKYGAVNLTLNFSPAHFLPSIVSILKNMPVMAGIISYGISFLLWIKVLSKVELSYAYPMVSL
GYVLVMIFSYFFFKENITPIRILGVAFIMIGVILVARS

Sequences:

>Translated_118_residues
MIYLILTSVFLGALGQILVKYGAVNLTLNFSPAHFLPSIVSILKNMPVMAGIISYGISFLLWIKVLSKVELSYAYPMVSL
GYVLVMIFSYFFFKENITPIRILGVAFIMIGVILVARS
>Mature_118_residues
MIYLILTSVFLGALGQILVKYGAVNLTLNFSPAHFLPSIVSILKNMPVMAGIISYGISFLLWIKVLSKVELSYAYPMVSL
GYVLVMIFSYFFFKENITPIRILGVAFIMIGVILVARS

Specific function: Translocates 4-amino-4-deoxy-L-arabinose- phosphoundecaprenol (alpha-L-Ara4N-phosphoundecaprenol) from the cytoplasmic to the periplasmic side of the inner membrane [H]

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DUF6 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620
- InterPro:   IPR022832 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 13115; Mature: 13115

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYLILTSVFLGALGQILVKYGAVNLTLNFSPAHFLPSIVSILKNMPVMAGIISYGISFL
CHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LWIKVLSKVELSYAYPMVSLGYVLVMIFSYFFFKENITPIRILGVAFIMIGVILVARS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIYLILTSVFLGALGQILVKYGAVNLTLNFSPAHFLPSIVSILKNMPVMAGIISYGISFL
CHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LWIKVLSKVELSYAYPMVSLGYVLVMIFSYFFFKENITPIRILGVAFIMIGVILVARS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA