| Definition | Clostridium botulinum A str. Hall, complete genome. |
|---|---|
| Accession | NC_009698 |
| Length | 3,760,560 |
Click here to switch to the map view.
The map label for this gene is 153936889
Identifier: 153936889
GI number: 153936889
Start: 2012770
End: 2013396
Strand: Direct
Name: 153936889
Synonym: CLC_1901
Alternate gene names: NA
Gene position: 2012770-2013396 (Clockwise)
Preceding gene: 153934854
Following gene: 153935410
Centisome position: 53.52
GC content: 37.0
Gene sequence:
>627_bases ATGAAAGTATTACTTATTAATGGAAGTCCCAAAGTTAAAGGATGTACTTATACTGCCTTATGCGAAACAGCAAAGGAACT GGAGAAAGAAAATATTGAAACAGAAATTTTCCATATTGGAAATAAGCCTATTCGAGGTTGCATGGCTTGCGGAGGTTGTT ACAAAAATGAATCCGGCAAGTGCGTATTTGACGATGATACTGTAAATATGGCCTTGGAAAAAGCTAAAGAAGCTGACGGA TTTATCTTTGGTTCTCCTGTACATTATGCAGCTGCTTCTGGACAAATAACATCTTTTTTAGATAGATTCTTTTATGCCGG AGATAGCTTTCAGTATAAACCTGGGGCCGCTATTGTAAGCTGTCGCCGCGGTGGCTCAACTGCAGCCTTTGATCAGTTAA ATAAATATTTTACTATTTCAAACATGCCTATTGTATCTTCTCAATATTGGAATATGGTTCATGGAAATACTCCTGAAGAA GTAAAACAGGATTTAGAAGGAATGCAAACAATGAGAGTATTAGGTAAAAATATGGCCTGGCTTTTGAAAAGTATAAATGC TGGTAAAAAAGCAGGAGTTGCACTCCCAGAAAAAGAACCAAGAGCATGGACCAACTTTATACGTTAA
Upstream 100 bases:
>100_bases ATATTTTGATGCATAGAAACTTAATAAATATTATGCATAATCTATTTAAATATTAATATTGTAAAATTAGAATAGTATAA AAGTGAAAAGAGGTATAAAA
Downstream 100 bases:
>100_bases TCTAGGAAGAGTCAACAAGAATTGTTGACTCTTCTGATTTAGAAATTCCTTCATAACTTGTGGTTATATATACATTACTG TAAAAAATCTATGTTATTTA
Product: NADPH-dependent FMN reductase
Products: NA
Alternate protein names: Isf-2; MCJ-2; Mj2 [H]
Number of amino acids: Translated: 208; Mature: 208
Protein sequence:
>208_residues MKVLLINGSPKVKGCTYTALCETAKELEKENIETEIFHIGNKPIRGCMACGGCYKNESGKCVFDDDTVNMALEKAKEADG FIFGSPVHYAAASGQITSFLDRFFYAGDSFQYKPGAAIVSCRRGGSTAAFDQLNKYFTISNMPIVSSQYWNMVHGNTPEE VKQDLEGMQTMRVLGKNMAWLLKSINAGKKAGVALPEKEPRAWTNFIR
Sequences:
>Translated_208_residues MKVLLINGSPKVKGCTYTALCETAKELEKENIETEIFHIGNKPIRGCMACGGCYKNESGKCVFDDDTVNMALEKAKEADG FIFGSPVHYAAASGQITSFLDRFFYAGDSFQYKPGAAIVSCRRGGSTAAFDQLNKYFTISNMPIVSSQYWNMVHGNTPEE VKQDLEGMQTMRVLGKNMAWLLKSINAGKKAGVALPEKEPRAWTNFIR >Mature_208_residues MKVLLINGSPKVKGCTYTALCETAKELEKENIETEIFHIGNKPIRGCMACGGCYKNESGKCVFDDDTVNMALEKAKEADG FIFGSPVHYAAASGQITSFLDRFFYAGDSFQYKPGAAIVSCRRGGSTAAFDQLNKYFTISNMPIVSSQYWNMVHGNTPEE VKQDLEGMQTMRVLGKNMAWLLKSINAGKKAGVALPEKEPRAWTNFIR
Specific function: Redox-active protein probably involved in electron transport [H]
COG id: COG0655
COG function: function code R; Multimeric flavodoxin WrbA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ssuE family. Isf subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005025 [H]
Pfam domain/function: PF03358 FMN_red [H]
EC number: NA
Molecular weight: Translated: 22963; Mature: 22963
Theoretical pI: Translated: 8.27; Mature: 8.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVLLINGSPKVKGCTYTALCETAKELEKENIETEIFHIGNKPIRGCMACGGCYKNESGK CEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHCCCCCCCCCC CVFDDDTVNMALEKAKEADGFIFGSPVHYAAASGQITSFLDRFFYAGDSFQYKPGAAIVS EEECCCHHHHHHHHHHHCCCEEECCCHHECCCCCHHHHHHHHHHHCCCCCEECCCCEEEE CRRGGSTAAFDQLNKYFTISNMPIVSSQYWNMVHGNTPEEVKQDLEGMQTMRVLGKNMAW ECCCCCHHHHHHHHHEEEECCCCEECHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LLKSINAGKKAGVALPEKEPRAWTNFIR HHHHHCCCCCCCCCCCCCCCHHHHHHCC >Mature Secondary Structure MKVLLINGSPKVKGCTYTALCETAKELEKENIETEIFHIGNKPIRGCMACGGCYKNESGK CEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHCCCCCCCCCC CVFDDDTVNMALEKAKEADGFIFGSPVHYAAASGQITSFLDRFFYAGDSFQYKPGAAIVS EEECCCHHHHHHHHHHHCCCEEECCCHHECCCCCHHHHHHHHHHHCCCCCEECCCCEEEE CRRGGSTAAFDQLNKYFTISNMPIVSSQYWNMVHGNTPEEVKQDLEGMQTMRVLGKNMAW ECCCCCHHHHHHHHHEEEECCCCEECHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LLKSINAGKKAGVALPEKEPRAWTNFIR HHHHHCCCCCCCCCCCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]