| Definition | Clostridium botulinum A str. Hall, complete genome. |
|---|---|
| Accession | NC_009698 |
| Length | 3,760,560 |
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The map label for this gene is pspE [H]
Identifier: 153936567
GI number: 153936567
Start: 1222601
End: 1222912
Strand: Direct
Name: pspE [H]
Synonym: CLC_1184
Alternate gene names: 153936567
Gene position: 1222601-1222912 (Clockwise)
Preceding gene: 153935821
Following gene: 153937545
Centisome position: 32.51
GC content: 29.17
Gene sequence:
>312_bases ATGTATATTAATACAATAACGCCAGAAGAAGCTAAGGAAATGCTAGATGAAAGAGAAGATATAACAATTTTAGATGTAAG AGGCGAAAATGAATATAGGGAAGGTCATATAAAAGGTAGTAAATCAATACCACTAGAATTTTTAGAGACAAATATTGAAG ATGAAGTGCCAGATAAAAATTCTACAATTTTTATATATTGTCAAAGTGGAAAAAAAGCTAAAGTTGGCTATGAATATTTA AAGGAGTTAGGTTATGACAATGTATATGATATGGGTGGAATAATGGATTGGCCTTATGAAATAGAAAGTTAG
Upstream 100 bases:
>100_bases CATTAATATTTGTAGAGCTTTTCCCAATTTAGTTTAAATTAATATAATAGCAGTATATAAATACAAAAAAATAATAATAT AGAAAGAAGATGAATTTTAA
Downstream 100 bases:
>100_bases TTTTTTAGATTTATTTATAATGAGTAGTCGGTATATACAAAAATATATACTAAAGTTTAGGGAGGACATAATCTAATGGC ATACACAATAATAGATATAA
Product: putative phage shock protein
Products: NA
Alternate protein names: TST; Phage shock protein E [H]
Number of amino acids: Translated: 103; Mature: 103
Protein sequence:
>103_residues MYINTITPEEAKEMLDEREDITILDVRGENEYREGHIKGSKSIPLEFLETNIEDEVPDKNSTIFIYCQSGKKAKVGYEYL KELGYDNVYDMGGIMDWPYEIES
Sequences:
>Translated_103_residues MYINTITPEEAKEMLDEREDITILDVRGENEYREGHIKGSKSIPLEFLETNIEDEVPDKNSTIFIYCQSGKKAKVGYEYL KELGYDNVYDMGGIMDWPYEIES >Mature_103_residues MYINTITPEEAKEMLDEREDITILDVRGENEYREGHIKGSKSIPLEFLETNIEDEVPDKNSTIFIYCQSGKKAKVGYEYL KELGYDNVYDMGGIMDWPYEIES
Specific function: The phage shock protein (psp) operon (pspABCDE) may play a significant role in the competition for survival under nutrient- or energy-limited conditions. PspE catalyzes the sulfur-transfer reaction from thiosulfate to cyanide, to form sulfite and thiocyan
COG id: COG0607
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 rhodanese domain [H]
Homologues:
Organism=Escherichia coli, GI1787567, Length=73, Percent_Identity=38.3561643835616, Blast_Score=66, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014323 - InterPro: IPR001763 [H]
Pfam domain/function: PF00581 Rhodanese [H]
EC number: =2.8.1.1 [H]
Molecular weight: Translated: 11997; Mature: 11997
Theoretical pI: Translated: 4.05; Mature: 4.05
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYINTITPEEAKEMLDEREDITILDVRGENEYREGHIKGSKSIPLEFLETNIEDEVPDKN CCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCC STIFIYCQSGKKAKVGYEYLKELGYDNVYDMGGIMDWPYEIES CEEEEEECCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCEEECC >Mature Secondary Structure MYINTITPEEAKEMLDEREDITILDVRGENEYREGHIKGSKSIPLEFLETNIEDEVPDKN CCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCC STIFIYCQSGKKAKVGYEYLKELGYDNVYDMGGIMDWPYEIES CEEEEEECCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1712397; 9097039; 9278503; 9868784 [H]