| Definition | Clostridium botulinum A str. Hall, complete genome. |
|---|---|
| Accession | NC_009698 |
| Length | 3,760,560 |
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The map label for this gene is 153936559
Identifier: 153936559
GI number: 153936559
Start: 2385119
End: 2385391
Strand: Reverse
Name: 153936559
Synonym: CLC_2257
Alternate gene names: NA
Gene position: 2385391-2385119 (Counterclockwise)
Preceding gene: 153937094
Following gene: 153935207
Centisome position: 63.43
GC content: 29.67
Gene sequence:
>273_bases ATGGAAGAAAATATAAAACGCTATAGCGATATGGAAAGATATGAACTTATAAATGTAAATGATGGAGATAAATATGGGTT TTTAGGAAACAATGATGTGGTAATAGATGAGGATGGATATTTGAAGTTTTTAATATTAAGTGAATCAGGCGGAAAACTTG GATTGTTTTCTAAACCAAGCTTATTAGAAGTGTCTTGGGACTCTGTAAAAAAAATAGGATCAAGAACTATAATAATTGAT GCTGAAAAGAGAGAATTAAAAAAAATCCGCTAG
Upstream 100 bases:
>100_bases GAAGCTAAATCAAAATTAATATAATATATTTTGTAATAAGCTCTCACTATTTTTCATAATATTGAATATGAATATTATGA GAAGTAATGGGAGGATTATT
Downstream 100 bases:
>100_bases GGAGATGGTAGACAAATGAAAATCTTAATTCAAAAGTTTGGAGGAACATCTGTATCTACAGCTGAAAGAAGATCTTTAGT AGTAGATAAAATAGTTAAGG
Product: PRC-barrel domain-containing protein
Products: NA
Alternate protein names: Sporulation Protein YlmC/YmxH Family; PRC-Barrel Domain-Containing Protein; Sporulation Protein YlmC/YmxH
Number of amino acids: Translated: 90; Mature: 90
Protein sequence:
>90_residues MEENIKRYSDMERYELINVNDGDKYGFLGNNDVVIDEDGYLKFLILSESGGKLGLFSKPSLLEVSWDSVKKIGSRTIIID AEKRELKKIR
Sequences:
>Translated_90_residues MEENIKRYSDMERYELINVNDGDKYGFLGNNDVVIDEDGYLKFLILSESGGKLGLFSKPSLLEVSWDSVKKIGSRTIIID AEKRELKKIR >Mature_90_residues MEENIKRYSDMERYELINVNDGDKYGFLGNNDVVIDEDGYLKFLILSESGGKLGLFSKPSLLEVSWDSVKKIGSRTIIID AEKRELKKIR
Specific function: Unknown
COG id: COG1873
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10345; Mature: 10345
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEENIKRYSDMERYELINVNDGDKYGFLGNNDVVIDEDGYLKFLILSESGGKLGLFSKPS CCCCHHHCCCCCCEEEEECCCCCCCCCCCCCCEEECCCCCEEEEEEECCCCEEEECCCCC LLEVSWDSVKKIGSRTIIIDAEKRELKKIR EEEECHHHHHHCCCEEEEEECCHHHHHCCC >Mature Secondary Structure MEENIKRYSDMERYELINVNDGDKYGFLGNNDVVIDEDGYLKFLILSESGGKLGLFSKPS CCCCHHHCCCCCCEEEEECCCCCCCCCCCCCCEEECCCCCEEEEEEECCCCEEEECCCCC LLEVSWDSVKKIGSRTIIIDAEKRELKKIR EEEECHHHHHHCCCEEEEEECCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA