Click here to switch to the map view.

The map label for this gene is 153936364

Identifier: 153936364

GI number: 153936364

Start: 1080868

End: 1082142

Strand: Direct

Name: 153936364

Synonym: CLC_1059

Alternate gene names: NA

Gene position: 1080868-1082142 (Clockwise)

Preceding gene: 153935567

Following gene: 153937495

Centisome position: 28.74

GC content: 32.16

Gene sequence:

>1275_bases
ATGGCAAAGATAAAAATACCATATCACAAGAAAATGATTGAAATAGGGATAGAAGATAAAAATTTAGTAGGAATTTTAGA
ATCAAAGGCGGATGAATATAAAAGAAATTTAAGTCAAGAAGAAATTGTTGAGGCTGCATTGGACAATCCTATACAATGCG
AAAAATTAGAAGATTTAGTAAAGGGAAAGAAGAACATGGTTATAATAACCAGTGATCATACAAGACCAGTACCAAGTAAG
ATAACAATGCCTATACTTTTAAGAAGAATAAGAGAGGTTAATCCTGATATAGATATAAAAATATTGATTGCTACAGGTTT
TCATAGAGAATCAACAAAAGAAGAGCTTATAAATAAATTTGGCGAAGAAATAGTTGAAAATGAAAATATAGTTATGCATG
TATCAACTGATGATAGCACTTTAGTGAAGGTTGGAACATTACCATCTGGTGGTGATCTTATATTAAATAAATTAGCAATG
GAAACAGAACTTTTAATAGCAGAGGGATTTATAGAATCACATTTCTTTGCAGGATTTTCAGGTGGAAGAAAGAGTATACT
ACCTGGAATAGCTTCTGCAAAAACTATAATGGCAAATCATTGTGGTGAATTTATTGCTAGTCCCAATGCTAGAACTGGAA
TATTAAAAGATAATCCAGTACACAAAGACATGATTTATGCCGCTGAAAAAGCTAGTTTAGCTTTTATATTAAATGTGGTA
ATAGATAGTGAAAAGAAAGTTATAAATGCTTTTGCAGGACATAGACAATATGCCCATGAAACAGGATGTAAATTTGTACT
TGAACTTTCAAAAGTTGAAAAGGTAAAAGCAGATATAGTGGTTTCAAGTAATGGAGGATATCCATTAGATCAAAATATAT
ATCAATCAGTAAAAGGTATGACAGCTGCTGAGTCTACCTGCAAGGAAGGCGGAGTAATAATAATGGTAGCAGCTTGTAAT
GACGGGCATGGAGGCCAATCATTTTATGATAATTTAGCTAATAGTAAATCACCAAGAGAACTTTTAGATAGAATAGCCAA
AGTTCCTAGATGTGAAACAGTTCCAGATCAATGGGAATTTCAGATATTAGCTAGGATGTTAGATAAATTTACAGTCATTT
TGGTTACAGATATGTGTGACCCAAATATGATTAAAGCTATGCATATGGAGCATGCATATAATTTTGAAGAAGCTTTAAAT
AGAGCTTATAAGCTAAAGGGAAAAGACGCTAAAGTAGCGGTAATACCTGATGGTGTGTCTGTAATTGTAGGATAA

Upstream 100 bases:

>100_bases
AAATTTTGTATAGTTTACGTAATTGTTTTAGGAATCATGGCTTATTTTATGGCACCTGTGTTTGGATTCTAATTGCTTAA
ACTAATGAGGAGGATGAAAT

Downstream 100 bases:

>100_bases
AAATTTATTATTAAACATAAATAGATTTTGGAGGTAATTTATATGGATATTTTAGTATGTATAAAACAAGTTCCGGGAAC
ATCAAAAGTAGAGGTGGATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 424; Mature: 423

Protein sequence:

>424_residues
MAKIKIPYHKKMIEIGIEDKNLVGILESKADEYKRNLSQEEIVEAALDNPIQCEKLEDLVKGKKNMVIITSDHTRPVPSK
ITMPILLRRIREVNPDIDIKILIATGFHRESTKEELINKFGEEIVENENIVMHVSTDDSTLVKVGTLPSGGDLILNKLAM
ETELLIAEGFIESHFFAGFSGGRKSILPGIASAKTIMANHCGEFIASPNARTGILKDNPVHKDMIYAAEKASLAFILNVV
IDSEKKVINAFAGHRQYAHETGCKFVLELSKVEKVKADIVVSSNGGYPLDQNIYQSVKGMTAAESTCKEGGVIIMVAACN
DGHGGQSFYDNLANSKSPRELLDRIAKVPRCETVPDQWEFQILARMLDKFTVILVTDMCDPNMIKAMHMEHAYNFEEALN
RAYKLKGKDAKVAVIPDGVSVIVG

Sequences:

>Translated_424_residues
MAKIKIPYHKKMIEIGIEDKNLVGILESKADEYKRNLSQEEIVEAALDNPIQCEKLEDLVKGKKNMVIITSDHTRPVPSK
ITMPILLRRIREVNPDIDIKILIATGFHRESTKEELINKFGEEIVENENIVMHVSTDDSTLVKVGTLPSGGDLILNKLAM
ETELLIAEGFIESHFFAGFSGGRKSILPGIASAKTIMANHCGEFIASPNARTGILKDNPVHKDMIYAAEKASLAFILNVV
IDSEKKVINAFAGHRQYAHETGCKFVLELSKVEKVKADIVVSSNGGYPLDQNIYQSVKGMTAAESTCKEGGVIIMVAACN
DGHGGQSFYDNLANSKSPRELLDRIAKVPRCETVPDQWEFQILARMLDKFTVILVTDMCDPNMIKAMHMEHAYNFEEALN
RAYKLKGKDAKVAVIPDGVSVIVG
>Mature_423_residues
AKIKIPYHKKMIEIGIEDKNLVGILESKADEYKRNLSQEEIVEAALDNPIQCEKLEDLVKGKKNMVIITSDHTRPVPSKI
TMPILLRRIREVNPDIDIKILIATGFHRESTKEELINKFGEEIVENENIVMHVSTDDSTLVKVGTLPSGGDLILNKLAME
TELLIAEGFIESHFFAGFSGGRKSILPGIASAKTIMANHCGEFIASPNARTGILKDNPVHKDMIYAAEKASLAFILNVVI
DSEKKVINAFAGHRQYAHETGCKFVLELSKVEKVKADIVVSSNGGYPLDQNIYQSVKGMTAAESTCKEGGVIIMVAACND
GHGGQSFYDNLANSKSPRELLDRIAKVPRCETVPDQWEFQILARMLDKFTVILVTDMCDPNMIKAMHMEHAYNFEEALNR
AYKLKGKDAKVAVIPDGVSVIVG

Specific function: Unknown

COG id: COG3875

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46866; Mature: 46735

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKIKIPYHKKMIEIGIEDKNLVGILESKADEYKRNLSQEEIVEAALDNPIQCEKLEDLV
CCEECCCHHHEEEEECCCCCCEEEHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHH
KGKKNMVIITSDHTRPVPSKITMPILLRRIREVNPDIDIKILIATGFHRESTKEELINKF
CCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHH
GEEIVENENIVMHVSTDDSTLVKVGTLPSGGDLILNKLAMETELLIAEGFIESHFFAGFS
HHHHHCCCCEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GGRKSILPGIASAKTIMANHCGEFIASPNARTGILKDNPVHKDMIYAAEKASLAFILNVV
CCCHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEHH
IDSEKKVINAFAGHRQYAHETGCKFVLELSKVEKVKADIVVSSNGGYPLDQNIYQSVKGM
HCCHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHEEEEEEEECCCCCCCCHHHHHHHCCC
TAAESTCKEGGVIIMVAACNDGHGGQSFYDNLANSKSPRELLDRIAKVPRCETVPDQWEF
HHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHH
QILARMLDKFTVILVTDMCDPNMIKAMHMEHAYNFEEALNRAYKLKGKDAKVAVIPDGVS
HHHHHHHHCEEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHEEECCCCCEEEEECCCCE
VIVG
EEEC
>Mature Secondary Structure 
AKIKIPYHKKMIEIGIEDKNLVGILESKADEYKRNLSQEEIVEAALDNPIQCEKLEDLV
CEECCCHHHEEEEECCCCCCEEEHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHH
KGKKNMVIITSDHTRPVPSKITMPILLRRIREVNPDIDIKILIATGFHRESTKEELINKF
CCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHH
GEEIVENENIVMHVSTDDSTLVKVGTLPSGGDLILNKLAMETELLIAEGFIESHFFAGFS
HHHHHCCCCEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GGRKSILPGIASAKTIMANHCGEFIASPNARTGILKDNPVHKDMIYAAEKASLAFILNVV
CCCHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEHH
IDSEKKVINAFAGHRQYAHETGCKFVLELSKVEKVKADIVVSSNGGYPLDQNIYQSVKGM
HCCHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHEEEEEEEECCCCCCCCHHHHHHHCCC
TAAESTCKEGGVIIMVAACNDGHGGQSFYDNLANSKSPRELLDRIAKVPRCETVPDQWEF
HHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHH
QILARMLDKFTVILVTDMCDPNMIKAMHMEHAYNFEEALNRAYKLKGKDAKVAVIPDGVS
HHHHHHHHCEEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHEEECCCCCEEEEECCCCE
VIVG
EEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA